BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 011005
(496 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 173 bits (438), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 99/287 (34%), Positives = 152/287 (52%), Gaps = 15/287 (5%)
Query: 194 RIVYEDLIEATEDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEA 253
R +L A+++F + +G GG+G VYK +L +G + A+K+L F+ E
Sbjct: 27 RFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTEV 86
Query: 254 QVLSQVLHRNIVKLYGYCLHKKCMFLIYEYMERGSLF-CNLHNNEDAVELDWAKRVNIVK 312
+++S +HRN+++L G+C+ L+Y YM GS+ C E LDW KR I
Sbjct: 87 EMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIAL 146
Query: 313 AMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLL-HADSSNRTLLAGT 371
A LAYLH C P IIHRD+ + NILL+ + EA V DFG A+L+ + D + GT
Sbjct: 147 GSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGT 206
Query: 372 YGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDIXXXXXXXXDPKIMLIDVL--- 428
G+IAPE T +EK DV+ +GV+ LE++ G+ D+ D +ML+D +
Sbjct: 207 IGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDL---ARLANDDDVMLLDWVKGL 263
Query: 429 --DQRLPPPVDRKVI-----RDILLISTVSFACLQSNPKSRPTMQSV 468
+++L VD + ++ + V+ C QS+P RP M V
Sbjct: 264 LKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEV 310
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 171 bits (432), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 98/287 (34%), Positives = 151/287 (52%), Gaps = 15/287 (5%)
Query: 194 RIVYEDLIEATEDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEA 253
R +L A+++F + +G GG+G VYK +L +G + A+K+L F+ E
Sbjct: 19 RFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTEV 78
Query: 254 QVLSQVLHRNIVKLYGYCLHKKCMFLIYEYMERGSLF-CNLHNNEDAVELDWAKRVNIVK 312
+++S +HRN+++L G+C+ L+Y YM GS+ C E LDW KR I
Sbjct: 79 EMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIAL 138
Query: 313 AMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLL-HADSSNRTLLAGT 371
A LAYLH C P IIHRD+ + NILL+ + EA V DFG A+L+ + D + G
Sbjct: 139 GSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGX 198
Query: 372 YGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDIXXXXXXXXDPKIMLIDVL--- 428
G+IAPE T +EK DV+ +GV+ LE++ G+ D+ D +ML+D +
Sbjct: 199 IGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDL---ARLANDDDVMLLDWVKGL 255
Query: 429 --DQRLPPPVDRKVI-----RDILLISTVSFACLQSNPKSRPTMQSV 468
+++L VD + ++ + V+ C QS+P RP M V
Sbjct: 256 LKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEV 302
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 97/286 (33%), Positives = 146/286 (51%), Gaps = 18/286 (6%)
Query: 194 RIVYEDLIEATEDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEA 253
R+ DL EAT +FD ++ IG G +G VYK L +G ALK+ T E I+ F+ E
Sbjct: 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKR-RTPESSQGIEEFETEI 86
Query: 254 QVLSQVLHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNE-DAVELDWAKRVNIVK 312
+ LS H ++V L G+C + M LIY+YME G+L +L+ ++ + + W +R+ I
Sbjct: 87 ETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICI 146
Query: 313 AMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARL-LHADSSN-RTLLAG 370
A L YLH + +IIHRD+ S NILL+ + DFG ++ D ++ ++ G
Sbjct: 147 GAARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKG 203
Query: 371 TYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKH------PRDIXXXXXXXXDP--KI 422
T GYI PE +TEK DVYSFGVV EVL + PR++ +
Sbjct: 204 TLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNG 263
Query: 423 MLIDVLDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSV 468
L ++D L + + +R + CL + + RP+M V
Sbjct: 264 QLEQIVDPNLADKIRPESLRK---FGDTAVKCLALSSEDRPSMGDV 306
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 96/286 (33%), Positives = 144/286 (50%), Gaps = 18/286 (6%)
Query: 194 RIVYEDLIEATEDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEA 253
R+ DL EAT +FD ++ IG G +G VYK L +G ALK+ T E I+ F+ E
Sbjct: 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKR-RTPESSQGIEEFETEI 86
Query: 254 QVLSQVLHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNE-DAVELDWAKRVNIVK 312
+ LS H ++V L G+C + M LIY+YME G+L +L+ ++ + + W +R+ I
Sbjct: 87 ETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICI 146
Query: 313 AMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTAR--LLHADSSNRTLLAG 370
A L YLH + +IIHRD+ S NILL+ + DFG ++ + ++ G
Sbjct: 147 GAARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKG 203
Query: 371 TYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKH------PRDIXXXXXXXXDP--KI 422
T GYI PE +TEK DVYSFGVV EVL + PR++ +
Sbjct: 204 TLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNG 263
Query: 423 MLIDVLDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSV 468
L ++D L + + +R + CL + + RP+M V
Sbjct: 264 QLEQIVDPNLADKIRPESLRK---FGDTAVKCLALSSEDRPSMGDV 306
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 124 bits (312), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 93/276 (33%), Positives = 138/276 (50%), Gaps = 23/276 (8%)
Query: 203 ATEDFDIRYCIGTGGYGSVYKAQLPNGK-VFALKKLHTS--EELAFIKSFKNEAQVLSQV 259
A EDF+I +G G +G+VY A+ K + ALK L + E+ + E ++ S +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 260 LHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALA 319
H NI++LYGY ++LI EY RG ++ L + + D + + +A+AL+
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKEL---QKLSKFDEQRTATYITELANALS 127
Query: 320 YLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPEL 379
Y H S +IHRDI N+LL S E +ADFG + +HA SS RT L GT Y+ PE+
Sbjct: 128 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEM 182
Query: 380 AYTMVMTEKCDVYSFGVVTLEVLMGKHPRDIXXXXXXXXDPKIMLIDVLDQRLPPPVDRK 439
+ EK D++S GV+ E L+GK P + I ++ P V
Sbjct: 183 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR-----ISRVEFTFPDFVTEG 237
Query: 440 VIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLIT 475
RD LIS + L+ NP RP ++ V + IT
Sbjct: 238 A-RD--LISRL----LKHNPSQRPMLREVLEHPWIT 266
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 92/276 (33%), Positives = 137/276 (49%), Gaps = 23/276 (8%)
Query: 203 ATEDFDIRYCIGTGGYGSVYKAQLPNGK-VFALKKLHTS--EELAFIKSFKNEAQVLSQV 259
A EDF+I +G G +G+VY A+ K + ALK L + E+ + E ++ S +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 260 LHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALA 319
H NI++LYGY ++LI EY RG ++ L + + D + + +A+AL+
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKEL---QKLSKFDEQRTATYITELANALS 127
Query: 320 YLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPEL 379
Y H S +IHRDI N+LL S E +ADFG + +HA SS R L GT Y+ PE+
Sbjct: 128 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRXXLXGTLDYLPPEM 182
Query: 380 AYTMVMTEKCDVYSFGVVTLEVLMGKHPRDIXXXXXXXXDPKIMLIDVLDQRLPPPVDRK 439
+ EK D++S GV+ E L+GK P + I ++ P V
Sbjct: 183 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR-----ISRVEFTFPDFVTEG 237
Query: 440 VIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLIT 475
RD LIS + L+ NP RP ++ V + IT
Sbjct: 238 A-RD--LISRL----LKHNPSQRPMLREVLEHPWIT 266
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 92/276 (33%), Positives = 138/276 (50%), Gaps = 23/276 (8%)
Query: 203 ATEDFDIRYCIGTGGYGSVYKAQLPNGK-VFALKKLHTS--EELAFIKSFKNEAQVLSQV 259
A EDF+I +G G +G+VY A+ K + ALK L + E+ + E ++ S +
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 260 LHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALA 319
H NI++LYGY ++LI EY G+++ L + + D + + +A+AL+
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL---QKLSKFDEQRTATYITELANALS 148
Query: 320 YLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPEL 379
Y H S +IHRDI N+LL S E +ADFG + +HA SS RT L GT Y+ PE+
Sbjct: 149 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEM 203
Query: 380 AYTMVMTEKCDVYSFGVVTLEVLMGKHPRDIXXXXXXXXDPKIMLIDVLDQRLPPPVDRK 439
+ EK D++S GV+ E L+GK P + I ++ P V
Sbjct: 204 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR-----ISRVEFTFPDFVTEG 258
Query: 440 VIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLIT 475
RD LIS + L+ NP RP ++ V + IT
Sbjct: 259 A-RD--LISRL----LKHNPSQRPMLREVLEHPWIT 287
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 122 bits (305), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 92/276 (33%), Positives = 138/276 (50%), Gaps = 23/276 (8%)
Query: 203 ATEDFDIRYCIGTGGYGSVYKAQLPNGK-VFALKKLHTS--EELAFIKSFKNEAQVLSQV 259
A EDF+I +G G +G+VY A+ K + ALK L + E+ + E ++ S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 260 LHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALA 319
H NI++LYGY ++LI EY G+++ L + + D + + +A+AL+
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL---QKLSKFDEQRTATYITELANALS 122
Query: 320 YLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPEL 379
Y H S +IHRDI N+LL S E +ADFG + +HA SS RT L GT Y+ PE+
Sbjct: 123 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTXLCGTLDYLPPEM 177
Query: 380 AYTMVMTEKCDVYSFGVVTLEVLMGKHPRDIXXXXXXXXDPKIMLIDVLDQRLPPPVDRK 439
+ EK D++S GV+ E L+GK P + I ++ P V
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR-----ISRVEFTFPDFVTEG 232
Query: 440 VIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLIT 475
RD LIS + L+ NP RP ++ V + IT
Sbjct: 233 A-RD--LISRL----LKHNPSQRPMLREVLEHPWIT 261
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 122 bits (305), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 92/276 (33%), Positives = 138/276 (50%), Gaps = 23/276 (8%)
Query: 203 ATEDFDIRYCIGTGGYGSVYKAQLPNGK-VFALKKLHTS--EELAFIKSFKNEAQVLSQV 259
A EDF+I +G G +G+VY A+ N K + ALK L + E+ + E ++ S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 260 LHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALA 319
H NI++LYGY ++LI EY G+++ L + + D + + +A+AL+
Sbjct: 66 RHPNILRLYGYFHDSTRVYLILEYAPLGTVYREL---QKLSKFDEQRTATYITELANALS 122
Query: 320 YLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPEL 379
Y H S +IHRDI N+LL S E +ADFG + +HA SS R L GT Y+ PE+
Sbjct: 123 YCH---SKKVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRAALCGTLDYLPPEM 177
Query: 380 AYTMVMTEKCDVYSFGVVTLEVLMGKHPRDIXXXXXXXXDPKIMLIDVLDQRLPPPVDRK 439
+ EK D++S GV+ E L+GK P + I ++ P V
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKR-----ISRVEFTFPDFVTEG 232
Query: 440 VIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLIT 475
RD LIS + L+ NP RP ++ V + IT
Sbjct: 233 A-RD--LISRL----LKHNPSQRPMLREVLEHPWIT 261
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 122 bits (305), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 92/276 (33%), Positives = 138/276 (50%), Gaps = 23/276 (8%)
Query: 203 ATEDFDIRYCIGTGGYGSVYKAQLPNGK-VFALKKLHTS--EELAFIKSFKNEAQVLSQV 259
A EDF+I +G G +G+VY A+ K + ALK L + E+ + E ++ S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 260 LHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALA 319
H NI++LYGY ++LI EY G+++ L + + D + + +A+AL+
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL---QKLSKFDEQRTATYITELANALS 122
Query: 320 YLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPEL 379
Y H S +IHRDI N+LL S E +ADFG + +HA SS RT L GT Y+ PE+
Sbjct: 123 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEM 177
Query: 380 AYTMVMTEKCDVYSFGVVTLEVLMGKHPRDIXXXXXXXXDPKIMLIDVLDQRLPPPVDRK 439
+ EK D++S GV+ E L+GK P + I ++ P V
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR-----ISRVEFTFPDFVTEG 232
Query: 440 VIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLIT 475
RD LIS + L+ NP RP ++ V + IT
Sbjct: 233 A-RD--LISRL----LKHNPSQRPMLREVLEHPWIT 261
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 122 bits (305), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 92/276 (33%), Positives = 138/276 (50%), Gaps = 23/276 (8%)
Query: 203 ATEDFDIRYCIGTGGYGSVYKAQLPNGK-VFALKKLHTS--EELAFIKSFKNEAQVLSQV 259
A EDF+I +G G +G+VY A+ K + ALK L + E+ + E ++ S +
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 260 LHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALA 319
H NI++LYGY ++LI EY G+++ L + + D + + +A+AL+
Sbjct: 65 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL---QKLSKFDEQRTATYITELANALS 121
Query: 320 YLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPEL 379
Y H S +IHRDI N+LL S E +ADFG + +HA SS RT L GT Y+ PE+
Sbjct: 122 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEM 176
Query: 380 AYTMVMTEKCDVYSFGVVTLEVLMGKHPRDIXXXXXXXXDPKIMLIDVLDQRLPPPVDRK 439
+ EK D++S GV+ E L+GK P + I ++ P V
Sbjct: 177 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR-----ISRVEFTFPDFVTEG 231
Query: 440 VIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLIT 475
RD LIS + L+ NP RP ++ V + IT
Sbjct: 232 A-RD--LISRL----LKHNPSQRPMLREVLEHPWIT 260
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 122 bits (305), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 92/276 (33%), Positives = 138/276 (50%), Gaps = 23/276 (8%)
Query: 203 ATEDFDIRYCIGTGGYGSVYKAQLPNGK-VFALKKLHTS--EELAFIKSFKNEAQVLSQV 259
A EDF+I +G G +G+VY A+ K + ALK L + E+ + E ++ S +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 260 LHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALA 319
H NI++LYGY ++LI EY G+++ L + + D + + +A+AL+
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL---QKLSKFDEQRTATYITELANALS 127
Query: 320 YLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPEL 379
Y H S +IHRDI N+LL S E +ADFG + +HA SS RT L GT Y+ PE+
Sbjct: 128 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEM 182
Query: 380 AYTMVMTEKCDVYSFGVVTLEVLMGKHPRDIXXXXXXXXDPKIMLIDVLDQRLPPPVDRK 439
+ EK D++S GV+ E L+GK P + I ++ P V
Sbjct: 183 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR-----ISRVEFTFPDFVTEG 237
Query: 440 VIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLIT 475
RD LIS + L+ NP RP ++ V + IT
Sbjct: 238 A-RD--LISRL----LKHNPSQRPMLREVLEHPWIT 266
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 122 bits (305), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 92/276 (33%), Positives = 138/276 (50%), Gaps = 23/276 (8%)
Query: 203 ATEDFDIRYCIGTGGYGSVYKAQLPNGK-VFALKKLHTS--EELAFIKSFKNEAQVLSQV 259
A EDF+I +G G +G+VY A+ K + ALK L + E+ + E ++ S +
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 260 LHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALA 319
H NI++LYGY ++LI EY G+++ L + + D + + +A+AL+
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL---QKLSKFDEQRTATYITELANALS 126
Query: 320 YLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPEL 379
Y H S +IHRDI N+LL S E +ADFG + +HA SS RT L GT Y+ PE+
Sbjct: 127 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEM 181
Query: 380 AYTMVMTEKCDVYSFGVVTLEVLMGKHPRDIXXXXXXXXDPKIMLIDVLDQRLPPPVDRK 439
+ EK D++S GV+ E L+GK P + I ++ P V
Sbjct: 182 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR-----ISRVEFTFPDFVTEG 236
Query: 440 VIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLIT 475
RD LIS + L+ NP RP ++ V + IT
Sbjct: 237 A-RD--LISRL----LKHNPSQRPMLREVLEHPWIT 265
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 121 bits (304), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 92/276 (33%), Positives = 138/276 (50%), Gaps = 23/276 (8%)
Query: 203 ATEDFDIRYCIGTGGYGSVYKAQLPNGK-VFALKKLHTS--EELAFIKSFKNEAQVLSQV 259
A EDF+I +G G +G+VY A+ K + ALK L + E+ + E ++ S +
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 82
Query: 260 LHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALA 319
H NI++LYGY ++LI EY G+++ L + + D + + +A+AL+
Sbjct: 83 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL---QKLSKFDEQRTATYITELANALS 139
Query: 320 YLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPEL 379
Y H S +IHRDI N+LL S E +ADFG + +HA SS RT L GT Y+ PE+
Sbjct: 140 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEM 194
Query: 380 AYTMVMTEKCDVYSFGVVTLEVLMGKHPRDIXXXXXXXXDPKIMLIDVLDQRLPPPVDRK 439
+ EK D++S GV+ E L+GK P + I ++ P V
Sbjct: 195 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR-----ISRVEFTFPDFVTEG 249
Query: 440 VIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLIT 475
RD LIS + L+ NP RP ++ V + IT
Sbjct: 250 A-RD--LISRL----LKHNPSQRPMLREVLEHPWIT 278
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 121 bits (304), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 92/276 (33%), Positives = 138/276 (50%), Gaps = 23/276 (8%)
Query: 203 ATEDFDIRYCIGTGGYGSVYKAQLPNGK-VFALKKLHTS--EELAFIKSFKNEAQVLSQV 259
A EDF+I +G G +G+VY A+ K + ALK L + E+ + E ++ S +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 260 LHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALA 319
H NI++LYGY ++LI EY G+++ L + + D + + +A+AL+
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL---QKLSKFDEQRTATYITELANALS 125
Query: 320 YLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPEL 379
Y H S +IHRDI N+LL S E +ADFG + +HA SS RT L GT Y+ PE+
Sbjct: 126 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEM 180
Query: 380 AYTMVMTEKCDVYSFGVVTLEVLMGKHPRDIXXXXXXXXDPKIMLIDVLDQRLPPPVDRK 439
+ EK D++S GV+ E L+GK P + I ++ P V
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR-----ISRVEFTFPDFVTEG 235
Query: 440 VIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLIT 475
RD LIS + L+ NP RP ++ V + IT
Sbjct: 236 A-RD--LISRL----LKHNPSQRPMLREVLEHPWIT 264
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 121 bits (304), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 92/276 (33%), Positives = 138/276 (50%), Gaps = 23/276 (8%)
Query: 203 ATEDFDIRYCIGTGGYGSVYKAQLPNGK-VFALKKLHTS--EELAFIKSFKNEAQVLSQV 259
A EDF+I +G G +G+VY A+ K + ALK L + E+ + E ++ S +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 260 LHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALA 319
H NI++LYGY ++LI EY G+++ L + + D + + +A+AL+
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL---QKLSKFDEQRTATYITELANALS 125
Query: 320 YLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPEL 379
Y H S +IHRDI N+LL S E +ADFG + +HA SS RT L GT Y+ PE+
Sbjct: 126 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEM 180
Query: 380 AYTMVMTEKCDVYSFGVVTLEVLMGKHPRDIXXXXXXXXDPKIMLIDVLDQRLPPPVDRK 439
+ EK D++S GV+ E L+GK P + I ++ P V
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR-----ISRVEFTFPDFVTEG 235
Query: 440 VIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLIT 475
RD LIS + L+ NP RP ++ V + IT
Sbjct: 236 A-RD--LISRL----LKHNPSQRPMLREVLEHPWIT 264
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 121 bits (304), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 92/276 (33%), Positives = 138/276 (50%), Gaps = 23/276 (8%)
Query: 203 ATEDFDIRYCIGTGGYGSVYKAQLPNGK-VFALKKLHTS--EELAFIKSFKNEAQVLSQV 259
A EDF+I +G G +G+VY A+ K + ALK L + E+ + E ++ S +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 260 LHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALA 319
H NI++LYGY ++LI EY G+++ L + + D + + +A+AL+
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL---QKLSKFDEQRTATYITELANALS 123
Query: 320 YLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPEL 379
Y H S +IHRDI N+LL S E +ADFG + HA SS RT L+GT Y+ PE+
Sbjct: 124 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--CHAPSSRRTTLSGTLDYLPPEM 178
Query: 380 AYTMVMTEKCDVYSFGVVTLEVLMGKHPRDIXXXXXXXXDPKIMLIDVLDQRLPPPVDRK 439
+ EK D++S GV+ E L+GK P + I ++ P V
Sbjct: 179 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR-----ISRVEFTFPDFVTEG 233
Query: 440 VIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLIT 475
RD LIS + L+ NP RP ++ V + IT
Sbjct: 234 A-RD--LISRL----LKHNPSQRPMLREVLEHPWIT 262
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/276 (33%), Positives = 138/276 (50%), Gaps = 23/276 (8%)
Query: 203 ATEDFDIRYCIGTGGYGSVYKAQLPNGK-VFALKKLHTS--EELAFIKSFKNEAQVLSQV 259
A EDF+I +G G +G+VY A+ K + ALK L + E+ + E ++ S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 260 LHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALA 319
H NI++LYGY ++LI EY G+++ L + + D + + +A+AL+
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL---QKLSKFDEQRTATYITELANALS 122
Query: 320 YLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPEL 379
Y H S +IHRDI N+LL S E +ADFG + +HA SS RT L GT Y+ PE+
Sbjct: 123 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTELCGTLDYLPPEM 177
Query: 380 AYTMVMTEKCDVYSFGVVTLEVLMGKHPRDIXXXXXXXXDPKIMLIDVLDQRLPPPVDRK 439
+ EK D++S GV+ E L+GK P + I ++ P V
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR-----ISRVEFTFPDFVTEG 232
Query: 440 VIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLIT 475
RD LIS + L+ NP RP ++ V + IT
Sbjct: 233 A-RD--LISRL----LKHNPSQRPMLREVLEHPWIT 261
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/276 (33%), Positives = 138/276 (50%), Gaps = 23/276 (8%)
Query: 203 ATEDFDIRYCIGTGGYGSVYKAQLPNGK-VFALKKLHTS--EELAFIKSFKNEAQVLSQV 259
A EDF+I +G G +G+VY A+ K + ALK L + E+ + E ++ S +
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 260 LHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALA 319
H NI++LYGY ++LI EY G+++ L + + D + + +A+AL+
Sbjct: 63 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL---QKLSKFDEQRTATYITELANALS 119
Query: 320 YLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPEL 379
Y H S +IHRDI N+LL S E +ADFG + +HA SS RT L GT Y+ PE+
Sbjct: 120 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEM 174
Query: 380 AYTMVMTEKCDVYSFGVVTLEVLMGKHPRDIXXXXXXXXDPKIMLIDVLDQRLPPPVDRK 439
+ EK D++S GV+ E L+GK P + I ++ P V
Sbjct: 175 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR-----ISRVEFTFPDFVTEG 229
Query: 440 VIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLIT 475
RD LIS + L+ NP RP ++ V + IT
Sbjct: 230 A-RD--LISRL----LKHNPSQRPMLREVLEHPWIT 258
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/276 (33%), Positives = 138/276 (50%), Gaps = 23/276 (8%)
Query: 203 ATEDFDIRYCIGTGGYGSVYKAQLPNGK-VFALKKLHTS--EELAFIKSFKNEAQVLSQV 259
A EDF+I +G G +G+VY A+ K + ALK L + E+ + E ++ S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 260 LHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALA 319
H NI++LYGY ++LI EY G+++ L + + D + + +A+AL+
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL---QKLSKFDEQRTATYITELANALS 122
Query: 320 YLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPEL 379
Y H S +IHRDI N+LL S E +ADFG + +HA SS RT L GT Y+ PE+
Sbjct: 123 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTDLCGTLDYLPPEM 177
Query: 380 AYTMVMTEKCDVYSFGVVTLEVLMGKHPRDIXXXXXXXXDPKIMLIDVLDQRLPPPVDRK 439
+ EK D++S GV+ E L+GK P + I ++ P V
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR-----ISRVEFTFPDFVTEG 232
Query: 440 VIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLIT 475
RD LIS + L+ NP RP ++ V + IT
Sbjct: 233 A-RD--LISRL----LKHNPSQRPMLREVLEHPWIT 261
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/276 (33%), Positives = 138/276 (50%), Gaps = 23/276 (8%)
Query: 203 ATEDFDIRYCIGTGGYGSVYKAQLPNGK-VFALKKLHTS--EELAFIKSFKNEAQVLSQV 259
A EDF+I +G G +G+VY A+ K + ALK L + E+ + E ++ S +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 260 LHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALA 319
H NI++LYGY ++LI EY G+++ L + + D + + +A+AL+
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL---QKLSKFDEQRTATYITELANALS 123
Query: 320 YLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPEL 379
Y H S +IHRDI N+LL S E +ADFG + +HA SS RT L GT Y+ PE+
Sbjct: 124 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTDLCGTLDYLPPEM 178
Query: 380 AYTMVMTEKCDVYSFGVVTLEVLMGKHPRDIXXXXXXXXDPKIMLIDVLDQRLPPPVDRK 439
+ EK D++S GV+ E L+GK P + I ++ P V
Sbjct: 179 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR-----ISRVEFTFPDFVTEG 233
Query: 440 VIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLIT 475
RD LIS + L+ NP RP ++ V + IT
Sbjct: 234 A-RD--LISRL----LKHNPSQRPMLREVLEHPWIT 262
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/276 (33%), Positives = 138/276 (50%), Gaps = 23/276 (8%)
Query: 203 ATEDFDIRYCIGTGGYGSVYKAQLPNGK-VFALKKLHTS--EELAFIKSFKNEAQVLSQV 259
A EDF+I +G G +G+VY A+ K + ALK L + E+ + E ++ S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 260 LHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALA 319
H NI++LYGY ++LI EY G+++ L + + D + + +A+AL+
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL---QKLSKFDEQRTATYITELANALS 122
Query: 320 YLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPEL 379
Y H S +IHRDI N+LL S E +ADFG + +HA SS RT L GT Y+ PE+
Sbjct: 123 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTDLCGTLDYLPPEM 177
Query: 380 AYTMVMTEKCDVYSFGVVTLEVLMGKHPRDIXXXXXXXXDPKIMLIDVLDQRLPPPVDRK 439
+ EK D++S GV+ E L+GK P + I ++ P V
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR-----ISRVEFTFPDFVTEG 232
Query: 440 VIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLIT 475
RD LIS + L+ NP RP ++ V + IT
Sbjct: 233 A-RD--LISRL----LKHNPSQRPMLREVLEHPWIT 261
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/276 (33%), Positives = 138/276 (50%), Gaps = 23/276 (8%)
Query: 203 ATEDFDIRYCIGTGGYGSVYKAQLPNGK-VFALKKLHTS--EELAFIKSFKNEAQVLSQV 259
A EDF+I +G G +G+VY A+ K + ALK L + E+ + E ++ S +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 260 LHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALA 319
H NI++LYGY ++LI EY G+++ L + + D + + +A+AL+
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL---QKLSKFDEQRTATYITELANALS 127
Query: 320 YLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPEL 379
Y H S +IHRDI N+LL S E +ADFG + +HA SS RT L GT Y+ PE+
Sbjct: 128 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTDLCGTLDYLPPEM 182
Query: 380 AYTMVMTEKCDVYSFGVVTLEVLMGKHPRDIXXXXXXXXDPKIMLIDVLDQRLPPPVDRK 439
+ EK D++S GV+ E L+GK P + I ++ P V
Sbjct: 183 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR-----ISRVEFTFPDFVTEG 237
Query: 440 VIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLIT 475
RD LIS + L+ NP RP ++ V + IT
Sbjct: 238 A-RD--LISRL----LKHNPSQRPMLREVLEHPWIT 266
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/276 (32%), Positives = 138/276 (50%), Gaps = 23/276 (8%)
Query: 203 ATEDFDIRYCIGTGGYGSVYKAQLPNGK-VFALKKLHTS--EELAFIKSFKNEAQVLSQV 259
A EDF+I +G G +G+VY A+ K + ALK L + E+ + E ++ S +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 260 LHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALA 319
H NI++LYGY ++LI EY G+++ L + + D + + +A+AL+
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL---QKLSKFDEQRTATYITELANALS 125
Query: 320 YLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPEL 379
Y H S +IHRDI N+LL S E +A+FG + +HA SS RT L GT Y+ PE+
Sbjct: 126 YCH---SKRVIHRDIKPENLLLGSAGELKIANFGWS--VHAPSSRRTTLCGTLDYLPPEM 180
Query: 380 AYTMVMTEKCDVYSFGVVTLEVLMGKHPRDIXXXXXXXXDPKIMLIDVLDQRLPPPVDRK 439
+ EK D++S GV+ E L+GK P + I ++ P V
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR-----ISRVEFTFPDFVTEG 235
Query: 440 VIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLIT 475
RD LIS + L+ NP RP ++ V + IT
Sbjct: 236 A-RD--LISRL----LKHNPSQRPMLREVLEHPWIT 264
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/276 (33%), Positives = 136/276 (49%), Gaps = 23/276 (8%)
Query: 203 ATEDFDIRYCIGTGGYGSVYKAQLPNGK-VFALKKLHTS--EELAFIKSFKNEAQVLSQV 259
A EDF+I +G G +G+VY A+ K + ALK L + E+ + E ++ S +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 260 LHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALA 319
H NI++LYGY ++LI EY G+++ L + + D + + +A+AL+
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL---QKLSKFDEQRTATYITELANALS 127
Query: 320 YLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPEL 379
Y H S +IHRDI N+LL S E +ADFG + +HA SS RT L GT Y+ PE
Sbjct: 128 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEX 182
Query: 380 AYTMVMTEKCDVYSFGVVTLEVLMGKHPRDIXXXXXXXXDPKIMLIDVLDQRLPPPVDRK 439
EK D++S GV+ E L+GK P + I ++ P V
Sbjct: 183 IEGRXHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR-----ISRVEFTFPDFVTEG 237
Query: 440 VIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLIT 475
RD LIS + L+ NP RP ++ V + IT
Sbjct: 238 A-RD--LISRL----LKHNPSQRPXLREVLEHPWIT 266
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 91/276 (32%), Positives = 137/276 (49%), Gaps = 23/276 (8%)
Query: 203 ATEDFDIRYCIGTGGYGSVYKAQLPNGK-VFALKKLHTS--EELAFIKSFKNEAQVLSQV 259
A EDF+I +G G +G+VY A+ K + ALK L + E+ + E ++ S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 260 LHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALA 319
H NI++LYGY ++LI EY G+++ L + + D + + +A+AL+
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL---QKLSKFDEQRTATYITELANALS 122
Query: 320 YLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPEL 379
Y H S +IHRDI N+LL S E +ADFG + +HA SS R L GT Y+ PE+
Sbjct: 123 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRAALCGTLDYLPPEM 177
Query: 380 AYTMVMTEKCDVYSFGVVTLEVLMGKHPRDIXXXXXXXXDPKIMLIDVLDQRLPPPVDRK 439
+ EK D++S GV+ E L+GK P + I ++ P V
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR-----ISRVEFTFPDFVTEG 232
Query: 440 VIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLIT 475
RD LIS + L+ NP RP ++ V + IT
Sbjct: 233 A-RD--LISRL----LKHNPSQRPMLREVLEHPWIT 261
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 91/276 (32%), Positives = 138/276 (50%), Gaps = 23/276 (8%)
Query: 203 ATEDFDIRYCIGTGGYGSVYKAQLPNGK-VFALKKLHTS--EELAFIKSFKNEAQVLSQV 259
A EDF+I +G G +G+VY A+ K + ALK L + E+ + E ++ S +
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 260 LHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALA 319
H NI++LYGY ++LI EY G+++ L + + D + + +A+AL+
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL---QKLSKFDEQRTATYITELANALS 124
Query: 320 YLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPEL 379
Y H S +IHRDI N+LL S E +A+FG + +HA SS RT L GT Y+ PE+
Sbjct: 125 YCH---SKRVIHRDIKPENLLLGSAGELKIANFGWS--VHAPSSRRTTLCGTLDYLPPEM 179
Query: 380 AYTMVMTEKCDVYSFGVVTLEVLMGKHPRDIXXXXXXXXDPKIMLIDVLDQRLPPPVDRK 439
+ EK D++S GV+ E L+GK P + I ++ P V
Sbjct: 180 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR-----ISRVEFTFPDFVTEG 234
Query: 440 VIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLIT 475
RD LIS + L+ NP RP ++ V + IT
Sbjct: 235 A-RD--LISRL----LKHNPSQRPMLREVLEHPWIT 263
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 91/276 (32%), Positives = 137/276 (49%), Gaps = 23/276 (8%)
Query: 203 ATEDFDIRYCIGTGGYGSVYKAQLPNGK-VFALKKLHTS--EELAFIKSFKNEAQVLSQV 259
A EDF+I +G G +G+VY A+ K + ALK L + E+ + E ++ S +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 260 LHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALA 319
H NI++LYGY ++LI EY G+++ L + + D + + +A+AL+
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL---QKLSKFDEQRTATYITELANALS 125
Query: 320 YLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPEL 379
Y H S +IHRDI N+LL S E +ADFG + +HA SS R L GT Y+ PE+
Sbjct: 126 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRAALCGTLDYLPPEM 180
Query: 380 AYTMVMTEKCDVYSFGVVTLEVLMGKHPRDIXXXXXXXXDPKIMLIDVLDQRLPPPVDRK 439
+ EK D++S GV+ E L+GK P + I ++ P V
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR-----ISRVEFTFPDFVTEG 235
Query: 440 VIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLIT 475
RD LIS + L+ NP RP ++ V + IT
Sbjct: 236 A-RD--LISRL----LKHNPSQRPMLREVLEHPWIT 264
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 91/276 (32%), Positives = 137/276 (49%), Gaps = 23/276 (8%)
Query: 203 ATEDFDIRYCIGTGGYGSVYKAQLPNGK-VFALKKLHTS--EELAFIKSFKNEAQVLSQV 259
A EDF+I +G G +G+VY A+ K + ALK L + E+ + E ++ S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 260 LHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALA 319
H NI++LYGY ++LI EY G+++ L + + D + + +A+AL+
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL---QKLSKFDEQRTATYITELANALS 122
Query: 320 YLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPEL 379
Y H S +IHRDI N+LL S E +ADFG + +HA SS R L GT Y+ PE+
Sbjct: 123 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRXXLCGTLDYLPPEM 177
Query: 380 AYTMVMTEKCDVYSFGVVTLEVLMGKHPRDIXXXXXXXXDPKIMLIDVLDQRLPPPVDRK 439
+ EK D++S GV+ E L+GK P + I ++ P V
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR-----ISRVEFTFPDFVTEG 232
Query: 440 VIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLIT 475
RD LIS + L+ NP RP ++ V + IT
Sbjct: 233 A-RD--LISRL----LKHNPSQRPMLREVLEHPWIT 261
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 91/276 (32%), Positives = 137/276 (49%), Gaps = 23/276 (8%)
Query: 203 ATEDFDIRYCIGTGGYGSVYKAQLPNGK-VFALKKLHTS--EELAFIKSFKNEAQVLSQV 259
A EDF+I +G G +G+VY A+ K + ALK L + E+ + E ++ S +
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 260 LHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALA 319
H NI++LYGY ++LI EY G+++ L + + D + + +A+AL+
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL---QKLSKFDEQRTATYITELANALS 124
Query: 320 YLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPEL 379
Y H S +IHRDI N+LL S E +ADFG + +HA SS R L GT Y+ PE+
Sbjct: 125 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRXXLCGTLDYLPPEM 179
Query: 380 AYTMVMTEKCDVYSFGVVTLEVLMGKHPRDIXXXXXXXXDPKIMLIDVLDQRLPPPVDRK 439
+ EK D++S GV+ E L+GK P + I ++ P V
Sbjct: 180 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR-----ISRVEFTFPDFVTEG 234
Query: 440 VIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLIT 475
RD LIS + L+ NP RP ++ V + IT
Sbjct: 235 A-RD--LISRL----LKHNPSQRPMLREVLEHPWIT 263
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 91/276 (32%), Positives = 137/276 (49%), Gaps = 23/276 (8%)
Query: 203 ATEDFDIRYCIGTGGYGSVYKAQLPNGK-VFALKKLHTS--EELAFIKSFKNEAQVLSQV 259
A EDF+I +G G +G+VY A+ K + ALK L + E+ + E ++ S +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 260 LHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALA 319
H NI++LYGY ++LI EY G+++ L + + D + + +A+AL+
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL---QKLSKFDEQRTATYITELANALS 125
Query: 320 YLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPEL 379
Y H S +IHRDI N+LL S E +ADFG + +HA SS R L GT Y+ PE+
Sbjct: 126 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRXXLCGTLDYLPPEM 180
Query: 380 AYTMVMTEKCDVYSFGVVTLEVLMGKHPRDIXXXXXXXXDPKIMLIDVLDQRLPPPVDRK 439
+ EK D++S GV+ E L+GK P + I ++ P V
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR-----ISRVEFTFPDFVTEG 235
Query: 440 VIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLIT 475
RD LIS + L+ NP RP ++ V + IT
Sbjct: 236 A-RD--LISRL----LKHNPSQRPMLREVLEHPWIT 264
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 91/276 (32%), Positives = 137/276 (49%), Gaps = 23/276 (8%)
Query: 203 ATEDFDIRYCIGTGGYGSVYKAQLPNGK-VFALKKLHTS--EELAFIKSFKNEAQVLSQV 259
A EDF+I +G G +G+VY A+ K + ALK L + E+ + E ++ S +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 260 LHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALA 319
H NI++LYGY ++LI EY G+++ L + + D + + +A+AL+
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL---QKLSKFDEQRTATYITELANALS 123
Query: 320 YLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPEL 379
Y H S +IHRDI N+LL S E +ADFG + +HA SS R L GT Y+ PE+
Sbjct: 124 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRDTLCGTLDYLPPEM 178
Query: 380 AYTMVMTEKCDVYSFGVVTLEVLMGKHPRDIXXXXXXXXDPKIMLIDVLDQRLPPPVDRK 439
+ EK D++S GV+ E L+GK P + I ++ P V
Sbjct: 179 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR-----ISRVEFTFPDFVTEG 233
Query: 440 VIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLIT 475
RD LIS + L+ NP RP ++ V + IT
Sbjct: 234 A-RD--LISRL----LKHNPSQRPMLREVLEHPWIT 262
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 75/208 (36%), Positives = 113/208 (54%), Gaps = 11/208 (5%)
Query: 203 ATEDFDIRYCIGTGGYGSVYKAQLPNGK-VFALKKLHTS--EELAFIKSFKNEAQVLSQV 259
A EDF+I +G G +G+VY A+ K + ALK L + E+ + E ++ S +
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 260 LHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALA 319
H NI++LYGY ++LI EY G+++ L + + D + + +A+AL+
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL---QKLSKFDEQRTATYITELANALS 148
Query: 320 YLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPEL 379
Y H S +IHRDI N+LL S E +ADFG + +HA SS R L GT Y+ PE+
Sbjct: 149 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRDDLCGTLDYLPPEM 203
Query: 380 AYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
+ EK D++S GV+ E L+GK P
Sbjct: 204 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 231
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 93/294 (31%), Positives = 142/294 (48%), Gaps = 31/294 (10%)
Query: 197 YEDLIEATEDFDIR------YCIGTGGYGSVYKAQLPNGKVFALKKLH-----TSEELAF 245
+ +L T +FD R +G GG+G VYK + N V A+KKL T+EEL
Sbjct: 17 FYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTV-AVKKLAAMVDITTEELK- 74
Query: 246 IKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWA 305
+ F E +V+++ H N+V+L G+ + L+Y YM GSL L + L W
Sbjct: 75 -QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWH 133
Query: 306 KRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLH--ADSS 363
R I + A+ + +LH + IHRDI S NILL+ A ++DFG AR A +
Sbjct: 134 MRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTV 190
Query: 364 NRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMG-------KHPRDIXXXXXX 416
+ + GT Y+APE A +T K D+YSFGVV LE++ G + P+ +
Sbjct: 191 MXSRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEE 249
Query: 417 XXDPKIMLIDVLDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQ 470
D + + D +D+++ V + +V+ CL RP ++ V Q
Sbjct: 250 IEDEEKTIEDYIDKKMNDADSTSV----EAMYSVASQCLHEKKNKRPDIKKVQQ 299
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 118 bits (296), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 91/276 (32%), Positives = 137/276 (49%), Gaps = 23/276 (8%)
Query: 203 ATEDFDIRYCIGTGGYGSVYKAQLPNGK-VFALKKLHTS--EELAFIKSFKNEAQVLSQV 259
A EDF+I +G G +G+VY A+ K + ALK L + E+ + E ++ S +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 260 LHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALA 319
H NI++LYGY ++LI EY G+++ L + + D + + +A+AL+
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL---QKLSKFDEQRTATYITELANALS 125
Query: 320 YLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPEL 379
Y H S +IHRDI N+LL S E +ADFG + +HA SS R L GT Y+ PE+
Sbjct: 126 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRDDLCGTLDYLPPEM 180
Query: 380 AYTMVMTEKCDVYSFGVVTLEVLMGKHPRDIXXXXXXXXDPKIMLIDVLDQRLPPPVDRK 439
+ EK D++S GV+ E L+GK P + I ++ P V
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR-----ISRVEFTFPDFVTEG 235
Query: 440 VIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLIT 475
RD LIS + L+ NP RP ++ V + IT
Sbjct: 236 A-RD--LISRL----LKHNPSQRPMLREVLEHPWIT 264
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 118 bits (296), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 75/206 (36%), Positives = 111/206 (53%), Gaps = 11/206 (5%)
Query: 205 EDFDIRYCIGTGGYGSVYKAQLPNGK-VFALKKLHTS--EELAFIKSFKNEAQVLSQVLH 261
EDFDI +G G +G+VY A+ K + ALK L + E+ + E ++ S + H
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 262 RNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYL 321
NI++LYGY ++LI EY G+++ L + D + + +A+AL+Y
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAPLGTVYREL---QKLSRFDEQRTATYITELANALSYC 128
Query: 322 HHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAY 381
H S +IHRDI N+LL S E +ADFG + +HA SS RT L GT Y+ PE+
Sbjct: 129 H---SKRVIHRDIKPENLLLGSNGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIE 183
Query: 382 TMVMTEKCDVYSFGVVTLEVLMGKHP 407
+ EK D++S GV+ E L+G P
Sbjct: 184 GRMHDEKVDLWSLGVLCYEFLVGMPP 209
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 118 bits (295), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 93/294 (31%), Positives = 141/294 (47%), Gaps = 31/294 (10%)
Query: 197 YEDLIEATEDFDIRYC------IGTGGYGSVYKAQLPNGKVFALKKLH-----TSEELAF 245
+ +L T +FD R +G GG+G VYK + N V A+KKL T+EEL
Sbjct: 17 FYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTV-AVKKLAAMVDITTEELK- 74
Query: 246 IKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWA 305
+ F E +V+++ H N+V+L G+ + L+Y YM GSL L + L W
Sbjct: 75 -QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWH 133
Query: 306 KRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLH--ADSS 363
R I + A+ + +LH + IHRDI S NILL+ A ++DFG AR A +
Sbjct: 134 MRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTV 190
Query: 364 NRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMG-------KHPRDIXXXXXX 416
+ GT Y+APE A +T K D+YSFGVV LE++ G + P+ +
Sbjct: 191 MXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEE 249
Query: 417 XXDPKIMLIDVLDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQ 470
D + + D +D+++ V + +V+ CL RP ++ V Q
Sbjct: 250 IEDEEKTIEDYIDKKMNDADSTSV----EAMYSVASQCLHEKKNKRPDIKKVQQ 299
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 93/294 (31%), Positives = 140/294 (47%), Gaps = 31/294 (10%)
Query: 197 YEDLIEATEDFDIRYC------IGTGGYGSVYKAQLPNGKVFALKKLH-----TSEELAF 245
+ +L T +FD R +G GG+G VYK + N V A+KKL T+EEL
Sbjct: 11 FYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTV-AVKKLAAMVDITTEELK- 68
Query: 246 IKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWA 305
+ F E +V+++ H N+V+L G+ + L+Y YM GSL L + L W
Sbjct: 69 -QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWH 127
Query: 306 KRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLH--ADSS 363
R I + A+ + +LH + IHRDI S NILL+ A ++DFG AR A
Sbjct: 128 MRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXV 184
Query: 364 NRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMG-------KHPRDIXXXXXX 416
+ GT Y+APE A +T K D+YSFGVV LE++ G + P+ +
Sbjct: 185 MXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEE 243
Query: 417 XXDPKIMLIDVLDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQ 470
D + + D +D+++ V + +V+ CL RP ++ V Q
Sbjct: 244 IEDEEKTIEDYIDKKMNDADSTSV----EAMYSVASQCLHEKKNKRPDIKKVQQ 293
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 74/206 (35%), Positives = 110/206 (53%), Gaps = 11/206 (5%)
Query: 205 EDFDIRYCIGTGGYGSVYKAQLPNGK-VFALKKLHTS--EELAFIKSFKNEAQVLSQVLH 261
EDFDI +G G +G+VY A+ K + ALK L + E+ + E ++ S + H
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 262 RNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYL 321
NI++LYGY ++LI EY G+++ L + D + + +A+AL+Y
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAPLGTVYREL---QKLSRFDEQRTATYITELANALSYC 128
Query: 322 HHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAY 381
H S +IHRDI N+LL S E +ADFG + +HA SS R L GT Y+ PE+
Sbjct: 129 H---SKRVIHRDIKPENLLLGSNGELKIADFGWS--VHAPSSRRDTLCGTLDYLPPEMIE 183
Query: 382 TMVMTEKCDVYSFGVVTLEVLMGKHP 407
+ EK D++S GV+ E L+G P
Sbjct: 184 GRMHDEKVDLWSLGVLCYEFLVGMPP 209
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 80/265 (30%), Positives = 132/265 (49%), Gaps = 19/265 (7%)
Query: 205 EDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNI 264
++ ++ +G G +G V KA+ K A+K++ + E K+F E + LS+V H NI
Sbjct: 8 KEIEVEEVVGRGAFGVVCKAKW-RAKDVAIKQIESESER---KAFIVELRQLSRVNHPNI 63
Query: 265 VKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHD 324
VKLYG CL+ C L+ EY E GSL+ LH E A ++ + +AYLH
Sbjct: 64 VKLYGACLNPVC--LVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSM 121
Query: 325 CSPSIIHRDISSNNILLNSKLEAF-VADFGTARLLHADSSNRTLLAGTYGYIAPELAYTM 383
++IHRD+ N+LL + + DFGTA + +N G+ ++APE+
Sbjct: 122 QPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNK---GSAAWMAPEVFEGS 178
Query: 384 VMTEKCDVYSFGVVTLEVLMGKHPRDIXXXXXXXXDPKIMLIDVLDQRLPPPVDRKVIRD 443
+EKCDV+S+G++ EV+ + P D P ++ + PP+ + + +
Sbjct: 179 NYSEKCDVFSWGIILWEVITRRKPFD------EIGGPAFRIMWAVHNGTRPPLIKNLPKP 232
Query: 444 ILLISTVSFACLQSNPKSRPTMQSV 468
I + T C +P RP+M+ +
Sbjct: 233 IESLMT---RCWSKDPSQRPSMEEI 254
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 80/265 (30%), Positives = 132/265 (49%), Gaps = 19/265 (7%)
Query: 205 EDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNI 264
++ ++ +G G +G V KA+ K A+K++ + E K+F E + LS+V H NI
Sbjct: 9 KEIEVEEVVGRGAFGVVCKAKW-RAKDVAIKQIESESER---KAFIVELRQLSRVNHPNI 64
Query: 265 VKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHD 324
VKLYG CL+ C L+ EY E GSL+ LH E A ++ + +AYLH
Sbjct: 65 VKLYGACLNPVC--LVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSM 122
Query: 325 CSPSIIHRDISSNNILLNSKLEAF-VADFGTARLLHADSSNRTLLAGTYGYIAPELAYTM 383
++IHRD+ N+LL + + DFGTA + +N G+ ++APE+
Sbjct: 123 QPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNK---GSAAWMAPEVFEGS 179
Query: 384 VMTEKCDVYSFGVVTLEVLMGKHPRDIXXXXXXXXDPKIMLIDVLDQRLPPPVDRKVIRD 443
+EKCDV+S+G++ EV+ + P D P ++ + PP+ + + +
Sbjct: 180 NYSEKCDVFSWGIILWEVITRRKPFD------EIGGPAFRIMWAVHNGTRPPLIKNLPKP 233
Query: 444 ILLISTVSFACLQSNPKSRPTMQSV 468
I + T C +P RP+M+ +
Sbjct: 234 IESLMT---RCWSKDPSQRPSMEEI 255
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 112/211 (53%), Gaps = 10/211 (4%)
Query: 205 EDFDIRYC-------IGTGGYGSVYKAQLPNGKVFALKKLHTSEELA-FIKSFKNEAQVL 256
+D DI +C IG G +G+V++A+ +G A+K L + A + F E ++
Sbjct: 30 DDMDIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIM 88
Query: 257 SQVLHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAH 316
++ H NIV G + ++ EY+ RGSL+ LH + +LD +R+++ +A
Sbjct: 89 KRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAK 148
Query: 317 ALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIA 376
+ YLH+ +P I+HRD+ S N+L++ K V DFG +RL + AGT ++A
Sbjct: 149 GMNYLHNR-NPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXAAGTPEWMA 207
Query: 377 PELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
PE+ EK DVYSFGV+ E+ + P
Sbjct: 208 PEVLRDEPSNEKSDVYSFGVILWELATLQQP 238
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 113/211 (53%), Gaps = 10/211 (4%)
Query: 205 EDFDIRYC-------IGTGGYGSVYKAQLPNGKVFALKKLHTSEELA-FIKSFKNEAQVL 256
+D DI +C IG G +G+V++A+ +G A+K L + A + F E ++
Sbjct: 30 DDMDIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIM 88
Query: 257 SQVLHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAH 316
++ H NIV G + ++ EY+ RGSL+ LH + +LD +R+++ +A
Sbjct: 89 KRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAK 148
Query: 317 ALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIA 376
+ YLH+ +P I+HR++ S N+L++ K V DFG +RL + + AGT ++A
Sbjct: 149 GMNYLHNR-NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMA 207
Query: 377 PELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
PE+ EK DVYSFGV+ E+ + P
Sbjct: 208 PEVLRDEPSNEKSDVYSFGVILWELATLQQP 238
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 111 bits (278), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 92/294 (31%), Positives = 135/294 (45%), Gaps = 31/294 (10%)
Query: 197 YEDLIEATEDFDIR------YCIGTGGYGSVYKAQLPNGKVFALKKLH-----TSEELAF 245
+ +L T +FD R G GG+G VYK + N V A+KKL T+EEL
Sbjct: 8 FYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNTTV-AVKKLAAMVDITTEELK- 65
Query: 246 IKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWA 305
+ F E +V ++ H N+V+L G+ + L+Y Y GSL L + L W
Sbjct: 66 -QQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWH 124
Query: 306 KRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLH--ADSS 363
R I + A+ + +LH + IHRDI S NILL+ A ++DFG AR A
Sbjct: 125 XRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXV 181
Query: 364 NRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMG-------KHPRDIXXXXXX 416
+ + GT Y APE A +T K D+YSFGVV LE++ G + P+ +
Sbjct: 182 XXSRIVGTTAYXAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEE 240
Query: 417 XXDPKIMLIDVLDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQ 470
D + + D +D++ V +V+ CL RP ++ V Q
Sbjct: 241 IEDEEKTIEDYIDKKXNDADSTSV----EAXYSVASQCLHEKKNKRPDIKKVQQ 290
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 107/208 (51%), Gaps = 11/208 (5%)
Query: 205 EDFDIRYCIGTGGYGSVYKAQLPNGK-VFALKKLHTS--EELAFIKSFKNEAQVLSQVLH 261
+DFDI +G G +G+VY A+ K + ALK L S E+ + E ++ S + H
Sbjct: 15 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 74
Query: 262 RNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYL 321
NI+++Y Y +K ++L+ E+ RG L+ L + D + ++ +A AL Y
Sbjct: 75 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHG---RFDEQRSATFMEELADALHYC 131
Query: 322 HHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAY 381
H +IHRDI N+L+ K E +ADFG + +HA S R + GT Y+ PE+
Sbjct: 132 HER---KVIHRDIKPENLLMGYKGELKIADFGWS--VHAPSLRRRXMCGTLDYLPPEMIE 186
Query: 382 TMVMTEKCDVYSFGVVTLEVLMGKHPRD 409
EK D++ GV+ E L+G P D
Sbjct: 187 GKTHDEKVDLWCAGVLCYEFLVGMPPFD 214
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 107/208 (51%), Gaps = 11/208 (5%)
Query: 205 EDFDIRYCIGTGGYGSVYKAQLPNGK-VFALKKLHTS--EELAFIKSFKNEAQVLSQVLH 261
+DFDI +G G +G+VY A+ K + ALK L S E+ + E ++ S + H
Sbjct: 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 262 RNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYL 321
NI+++Y Y +K ++L+ E+ RG L+ L + D + ++ +A AL Y
Sbjct: 74 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHG---RFDEQRSATFMEELADALHYC 130
Query: 322 HHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAY 381
H +IHRDI N+L+ K E +ADFG + +HA S R + GT Y+ PE+
Sbjct: 131 HER---KVIHRDIKPENLLMGYKGELKIADFGWS--VHAPSLRRRXMCGTLDYLPPEMIE 185
Query: 382 TMVMTEKCDVYSFGVVTLEVLMGKHPRD 409
EK D++ GV+ E L+G P D
Sbjct: 186 GKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 107/208 (51%), Gaps = 11/208 (5%)
Query: 205 EDFDIRYCIGTGGYGSVYKAQLPNGK-VFALKKLHTS--EELAFIKSFKNEAQVLSQVLH 261
+DFDI +G G +G+VY A+ K + ALK L S E+ + E ++ S + H
Sbjct: 14 DDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 262 RNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYL 321
NI+++Y Y +K ++L+ E+ RG L+ L + D + ++ +A AL Y
Sbjct: 74 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHG---RFDEQRSATFMEELADALHYC 130
Query: 322 HHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAY 381
H +IHRDI N+L+ K E +ADFG + +HA S R + GT Y+ PE+
Sbjct: 131 HER---KVIHRDIKPENLLMGYKGELKIADFGWS--VHAPSLRRRXMCGTLDYLPPEMIE 185
Query: 382 TMVMTEKCDVYSFGVVTLEVLMGKHPRD 409
EK D++ GV+ E L+G P D
Sbjct: 186 GKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 109/206 (52%), Gaps = 11/206 (5%)
Query: 205 EDFDIRYCIGTGGYGSVYKAQLPNGK-VFALKKLHTS--EELAFIKSFKNEAQVLSQVLH 261
+DF+I +G G +G+VY A+ + ALK L S E+ + E ++ + + H
Sbjct: 23 DDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHH 82
Query: 262 RNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYL 321
NI++LY Y ++ ++LI EY RG L+ L + + D + I++ +A AL Y
Sbjct: 83 PNILRLYNYFYDRRRIYLILEYAPRGELYKEL---QKSCTFDEQRTATIMEELADALMYC 139
Query: 322 HHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAY 381
H +IHRDI N+LL K E +ADFG + +HA S R + GT Y+ PE+
Sbjct: 140 H---GKKVIHRDIKPENLLLGLKGELKIADFGWS--VHAPSLRRKTMCGTLDYLPPEMIE 194
Query: 382 TMVMTEKCDVYSFGVVTLEVLMGKHP 407
+ EK D++ GV+ E+L+G P
Sbjct: 195 GRMHNEKVDLWCIGVLCYELLVGNPP 220
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 134/296 (45%), Gaps = 41/296 (13%)
Query: 195 IVYEDLIEATEDF---------DIRYCIGTGGYGSVYKA--QLPNGK--VFALKKLHTSE 241
+ED EA +F I IG G +G V +LP + A+K L +
Sbjct: 14 FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY 73
Query: 242 ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVE 301
+ F +EA ++ Q H N++ L G + +I E+ME GSL L N+
Sbjct: 74 TEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFT 133
Query: 302 LDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHAD 361
+ + V +++ +A + YL + +HRD+++ NIL+NS L V+DFG +R L D
Sbjct: 134 V--IQLVGMLRGIAAGMKYL---ADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDD 188
Query: 362 SSNRTLLAGTYG-----YIAPELAYTMVMTEKCDVYSFGVVTLEVL-MGKHP-RDIXXXX 414
+S+ T + G + APE T DV+S+G+V EV+ G+ P D+
Sbjct: 189 TSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQD 248
Query: 415 XXXXDPKIMLIDVLDQ--RLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSV 468
+I+ ++Q RLPPP+D L++ C Q + RP +
Sbjct: 249 ---------VINAIEQDYRLPPPMDCPSALHQLMLD-----CWQKDRNHRPKFGQI 290
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 103/205 (50%), Gaps = 16/205 (7%)
Query: 213 IGTGGYGSVYKAQLPNGKVFALKKLHTSEE--LAFIKSFKNEAQVLSQVLHRNIVKLYGY 270
IG GG+G VY+A +V H +E I++ + EA++ + + H NI+ L G
Sbjct: 15 IGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGV 74
Query: 271 CLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSII 330
CL + + L+ E+ G L L ++ VN +A + YLH + II
Sbjct: 75 CLKEPNLCLVMEFARGGPLNRVLSGKRIPPDI----LVNWAVQIARGMNYLHDEAIVPII 130
Query: 331 HRDISSNNILLNSKLEAF--------VADFGTARLLHADSSNRTLLAGTYGYIAPELAYT 382
HRD+ S+NIL+ K+E + DFG AR H + + AG Y ++APE+
Sbjct: 131 HRDLKSSNILILQKVENGDLSNKILKITDFGLAREWH--RTTKMSAAGAYAWMAPEVIRA 188
Query: 383 MVMTEKCDVYSFGVVTLEVLMGKHP 407
+ ++ DV+S+GV+ E+L G+ P
Sbjct: 189 SMFSKGSDVWSYGVLLWELLTGEVP 213
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 136/288 (47%), Gaps = 41/288 (14%)
Query: 201 IEATEDFDIRYC-----IGTGGYGSVYKAQL--PNGK--VFALKKLHTSEELAFIKSFKN 251
+E ++ D+ Y IG G +G V + +L P K A+K L + F +
Sbjct: 5 MEFAKEIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLS 64
Query: 252 EAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEYMERGSL--FCNLHNNEDAVELDWAKRVN 309
EA ++ Q H NI++L G + + ++ E+ME G+L F L++ + V + V
Sbjct: 65 EASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTV----IQLVG 120
Query: 310 IVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLA 369
+++ +A + YL S +HRD+++ NIL+NS L V+DFG +R L +SS+ T +
Sbjct: 121 MLRGIASGMRYL---AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTS 177
Query: 370 GTYG-----YIAPELAYTMVMTEKCDVYSFGVVTLEVL-MGKHP-RDIXXXXXXXXDPKI 422
G + APE T D +S+G+V EV+ G+ P D+
Sbjct: 178 SLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQD-------- 229
Query: 423 MLIDVLDQ--RLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSV 468
+I+ ++Q RLPPP D L++ C Q + +RP V
Sbjct: 230 -VINAIEQDYRLPPPPDCPTSLHQLMLD-----CWQKDRNARPRFPQV 271
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 114/204 (55%), Gaps = 20/204 (9%)
Query: 213 IGTGGYGSVYKAQLPNGKVFALKKLH-TSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYC 271
IG+G +G+VYK + +G V A+K L+ T+ +++FKNE VL + H NI+ GY
Sbjct: 21 IGSGSFGTVYKGKW-HGDV-AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 78
Query: 272 LHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIH 331
K + ++ ++ E SL+ +LH E E+ K ++I + A + YLH + SIIH
Sbjct: 79 T-KPQLAIVTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYLH---AKSIIH 132
Query: 332 RDISSNNILLNSKLEAFVADFG--TARLLHADSSNRTLLAGTYGYIAPELAYTMVMTEK- 388
RD+ SNNI L+ L + DFG T + + S L+G+ ++APE+ + M +K
Sbjct: 133 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV---IRMQDKN 189
Query: 389 -----CDVYSFGVVTLEVLMGKHP 407
DVY+FG+V E++ G+ P
Sbjct: 190 PYSFQSDVYAFGIVLYELMTGQLP 213
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 114/204 (55%), Gaps = 20/204 (9%)
Query: 213 IGTGGYGSVYKAQLPNGKVFALKKLH-TSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYC 271
IG+G +G+VYK + +G V A+K L+ T+ +++FKNE VL + H NI+ GY
Sbjct: 16 IGSGSFGTVYKGKW-HGDV-AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 272 LHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIH 331
K + ++ ++ E SL+ +LH E E+ K ++I + A + YLH + SIIH
Sbjct: 74 T-KPQLAIVTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYLH---AKSIIH 127
Query: 332 RDISSNNILLNSKLEAFVADFG--TARLLHADSSNRTLLAGTYGYIAPELAYTMVMTEK- 388
RD+ SNNI L+ L + DFG T + + S L+G+ ++APE+ + M +K
Sbjct: 128 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV---IRMQDKN 184
Query: 389 -----CDVYSFGVVTLEVLMGKHP 407
DVY+FG+V E++ G+ P
Sbjct: 185 PYSFQSDVYAFGIVLYELMTGQLP 208
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 114/204 (55%), Gaps = 20/204 (9%)
Query: 213 IGTGGYGSVYKAQLPNGKVFALKKLH-TSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYC 271
IG+G +G+VYK + +G V A+K L+ T+ +++FKNE VL + H NI+ GY
Sbjct: 36 IGSGSFGTVYKGKW-HGDV-AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 93
Query: 272 LHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIH 331
K + ++ ++ E SL+ +LH E E+ K ++I + A + YLH + SIIH
Sbjct: 94 T-KPQLAIVTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYLH---AKSIIH 147
Query: 332 RDISSNNILLNSKLEAFVADFG--TARLLHADSSNRTLLAGTYGYIAPELAYTMVMTEK- 388
RD+ SNNI L+ L + DFG T + + S L+G+ ++APE+ + M +K
Sbjct: 148 RDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEV---IRMQDKN 204
Query: 389 -----CDVYSFGVVTLEVLMGKHP 407
DVY+FG+V E++ G+ P
Sbjct: 205 PYSFQSDVYAFGIVLYELMTGQLP 228
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 114/204 (55%), Gaps = 20/204 (9%)
Query: 213 IGTGGYGSVYKAQLPNGKVFALKKLH-TSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYC 271
IG+G +G+VYK + +G V A+K L+ T+ +++FKNE VL + H NI+ GY
Sbjct: 43 IGSGSFGTVYKGKW-HGDV-AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 100
Query: 272 LHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIH 331
K + ++ ++ E SL+ +LH E E+ K ++I + A + YLH + SIIH
Sbjct: 101 T-KPQLAIVTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYLH---AKSIIH 154
Query: 332 RDISSNNILLNSKLEAFVADFG--TARLLHADSSNRTLLAGTYGYIAPELAYTMVMTEK- 388
RD+ SNNI L+ L + DFG T + + S L+G+ ++APE+ + M +K
Sbjct: 155 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV---IRMQDKN 211
Query: 389 -----CDVYSFGVVTLEVLMGKHP 407
DVY+FG+V E++ G+ P
Sbjct: 212 PYSFQSDVYAFGIVLYELMTGQLP 235
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 114/204 (55%), Gaps = 20/204 (9%)
Query: 213 IGTGGYGSVYKAQLPNGKVFALKKLH-TSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYC 271
IG+G +G+VYK + +G V A+K L+ T+ +++FKNE VL + H NI+ GY
Sbjct: 18 IGSGSFGTVYKGKW-HGDV-AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 75
Query: 272 LHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIH 331
K + ++ ++ E SL+ +LH E E+ K ++I + A + YLH + SIIH
Sbjct: 76 T-KPQLAIVTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYLH---AKSIIH 129
Query: 332 RDISSNNILLNSKLEAFVADFG--TARLLHADSSNRTLLAGTYGYIAPELAYTMVMTEK- 388
RD+ SNNI L+ L + DFG T + + S L+G+ ++APE+ + M +K
Sbjct: 130 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV---IRMQDKN 186
Query: 389 -----CDVYSFGVVTLEVLMGKHP 407
DVY+FG+V E++ G+ P
Sbjct: 187 PYSFQSDVYAFGIVLYELMTGQLP 210
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 114/204 (55%), Gaps = 20/204 (9%)
Query: 213 IGTGGYGSVYKAQLPNGKVFALKKLH-TSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYC 271
IG+G +G+VYK + +G V A+K L+ T+ +++FKNE VL + H NI+ GY
Sbjct: 16 IGSGSFGTVYKGKW-HGDV-AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 272 LHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIH 331
K + ++ ++ E SL+ +LH E E+ K ++I + A + YLH + SIIH
Sbjct: 74 T-KPQLAIVTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYLH---AKSIIH 127
Query: 332 RDISSNNILLNSKLEAFVADFG--TARLLHADSSNRTLLAGTYGYIAPELAYTMVMTEK- 388
RD+ SNNI L+ L + DFG T + + S L+G+ ++APE+ + M +K
Sbjct: 128 RDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEV---IRMQDKN 184
Query: 389 -----CDVYSFGVVTLEVLMGKHP 407
DVY+FG+V E++ G+ P
Sbjct: 185 PYSFQSDVYAFGIVLYELMTGQLP 208
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 114/204 (55%), Gaps = 20/204 (9%)
Query: 213 IGTGGYGSVYKAQLPNGKVFALKKLH-TSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYC 271
IG+G +G+VYK + +G V A+K L+ T+ +++FKNE VL + H NI+ GY
Sbjct: 44 IGSGSFGTVYKGKW-HGDV-AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 101
Query: 272 LHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIH 331
K + ++ ++ E SL+ +LH E E+ K ++I + A + YLH + SIIH
Sbjct: 102 T-KPQLAIVTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYLH---AKSIIH 155
Query: 332 RDISSNNILLNSKLEAFVADFG--TARLLHADSSNRTLLAGTYGYIAPELAYTMVMTEK- 388
RD+ SNNI L+ L + DFG T + + S L+G+ ++APE+ + M +K
Sbjct: 156 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV---IRMQDKN 212
Query: 389 -----CDVYSFGVVTLEVLMGKHP 407
DVY+FG+V E++ G+ P
Sbjct: 213 PYSFQSDVYAFGIVLYELMTGQLP 236
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 114/204 (55%), Gaps = 20/204 (9%)
Query: 213 IGTGGYGSVYKAQLPNGKVFALKKLH-TSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYC 271
IG+G +G+VYK + +G V A+K L+ T+ +++FKNE VL + H NI+ GY
Sbjct: 21 IGSGSFGTVYKGKW-HGDV-AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 78
Query: 272 LHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIH 331
K + ++ ++ E SL+ +LH E E+ K ++I + A + YLH + SIIH
Sbjct: 79 T-KPQLAIVTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYLH---AKSIIH 132
Query: 332 RDISSNNILLNSKLEAFVADFG--TARLLHADSSNRTLLAGTYGYIAPELAYTMVMTEK- 388
RD+ SNNI L+ L + DFG T + + S L+G+ ++APE+ + M +K
Sbjct: 133 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV---IRMQDKN 189
Query: 389 -----CDVYSFGVVTLEVLMGKHP 407
DVY+FG+V E++ G+ P
Sbjct: 190 PYSFQSDVYAFGIVLYELMTGQLP 213
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 114/204 (55%), Gaps = 20/204 (9%)
Query: 213 IGTGGYGSVYKAQLPNGKVFALKKLH-TSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYC 271
IG+G +G+VYK + +G V A+K L+ T+ +++FKNE VL + H NI+ GY
Sbjct: 44 IGSGSFGTVYKGKW-HGDV-AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 101
Query: 272 LHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIH 331
K + ++ ++ E SL+ +LH E E+ K ++I + A + YLH + SIIH
Sbjct: 102 T-KPQLAIVTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYLH---AKSIIH 155
Query: 332 RDISSNNILLNSKLEAFVADFG--TARLLHADSSNRTLLAGTYGYIAPELAYTMVMTEK- 388
RD+ SNNI L+ L + DFG T + + S L+G+ ++APE+ + M +K
Sbjct: 156 RDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEV---IRMQDKN 212
Query: 389 -----CDVYSFGVVTLEVLMGKHP 407
DVY+FG+V E++ G+ P
Sbjct: 213 PYSFQSDVYAFGIVLYELMTGQLP 236
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 137/291 (47%), Gaps = 41/291 (14%)
Query: 198 EDLIEATEDFDIRYC-----IGTGGYGSVYKAQL--PNGK--VFALKKLHTSEELAFIKS 248
E + E ++ D+ Y IG G +G V + +L P K A+K L +
Sbjct: 4 EAVREFAKEIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRRE 63
Query: 249 FKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEYMERGSL--FCNLHNNEDAVELDWAK 306
F +EA ++ Q H NI++L G + + ++ E+ME G+L F L++ + V +
Sbjct: 64 FLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTV----IQ 119
Query: 307 RVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRT 366
V +++ +A + YL S +HRD+++ NIL+NS L V+DFG +R L +SS+ T
Sbjct: 120 LVGMLRGIASGMRYL---AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPT 176
Query: 367 LLAGTYG-----YIAPELAYTMVMTEKCDVYSFGVVTLEVL-MGKHP-RDIXXXXXXXXD 419
+ G + APE T D +S+G+V EV+ G+ P D+
Sbjct: 177 ETSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQD----- 231
Query: 420 PKIMLIDVLDQ--RLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSV 468
+I+ ++Q RLPPP D L++ C Q + +RP V
Sbjct: 232 ----VINAIEQDYRLPPPPDCPTSLHQLMLD-----CWQKDRNARPRFPQV 273
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 113/201 (56%), Gaps = 14/201 (6%)
Query: 213 IGTGGYGSVYKAQLPNGKVFALKKLH-TSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYC 271
IG+G +G+VYK + +G V A+K L+ T+ +++FKNE VL + H NI+ GY
Sbjct: 20 IGSGSFGTVYKGKW-HGDV-AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 77
Query: 272 LHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIH 331
K + ++ ++ E SL+ +LH +E E+ K ++I + A + YLH + SIIH
Sbjct: 78 T-KPQLAIVTQWCEGSSLYHHLHASETKFEM--KKLIDIARQTARGMDYLH---AKSIIH 131
Query: 332 RDISSNNILLNSKLEAFVADFG--TARLLHADSSNRTLLAGTYGYIAPE---LAYTMVMT 386
RD+ SNNI L+ + DFG T + + S L+G+ ++APE + + +
Sbjct: 132 RDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYS 191
Query: 387 EKCDVYSFGVVTLEVLMGKHP 407
+ DVY+FG+V E++ G+ P
Sbjct: 192 FQSDVYAFGIVLYELMTGQLP 212
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 114/204 (55%), Gaps = 20/204 (9%)
Query: 213 IGTGGYGSVYKAQLPNGKVFALKKLH-TSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYC 271
IG+G +G+VYK + +G V A+K L+ T+ +++FKNE VL + H NI+ GY
Sbjct: 16 IGSGSFGTVYKGKW-HGDV-AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 272 LHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIH 331
+ + ++ ++ E SL+ +LH E E+ K ++I + A + YLH + SIIH
Sbjct: 74 TAPQ-LAIVTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYLH---AKSIIH 127
Query: 332 RDISSNNILLNSKLEAFVADFG--TARLLHADSSNRTLLAGTYGYIAPELAYTMVMTEK- 388
RD+ SNNI L+ L + DFG T + + S L+G+ ++APE+ + M +K
Sbjct: 128 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV---IRMQDKN 184
Query: 389 -----CDVYSFGVVTLEVLMGKHP 407
DVY+FG+V E++ G+ P
Sbjct: 185 PYSFQSDVYAFGIVLYELMTGQLP 208
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 113/201 (56%), Gaps = 14/201 (6%)
Query: 213 IGTGGYGSVYKAQLPNGKVFALKKLH-TSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYC 271
IG+G +G+VYK + +G V A+K L+ T+ +++FKNE VL + H NI+ GY
Sbjct: 32 IGSGSFGTVYKGKW-HGDV-AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 272 LHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIH 331
K + ++ ++ E SL+ +LH +E E+ K ++I + A + YLH + SIIH
Sbjct: 90 T-KPQLAIVTQWCEGSSLYHHLHASETKFEM--KKLIDIARQTARGMDYLH---AKSIIH 143
Query: 332 RDISSNNILLNSKLEAFVADFG--TARLLHADSSNRTLLAGTYGYIAPE---LAYTMVMT 386
RD+ SNNI L+ + DFG T + + S L+G+ ++APE + + +
Sbjct: 144 RDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYS 203
Query: 387 EKCDVYSFGVVTLEVLMGKHP 407
+ DVY+FG+V E++ G+ P
Sbjct: 204 FQSDVYAFGIVLYELMTGQLP 224
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 113/201 (56%), Gaps = 14/201 (6%)
Query: 213 IGTGGYGSVYKAQLPNGKVFALKKLH-TSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYC 271
IG+G +G+VYK + +G V A+K L+ T+ +++FKNE VL + H NI+ GY
Sbjct: 32 IGSGSFGTVYKGKW-HGDV-AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 272 LHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIH 331
+ + ++ ++ E SL+ +LH +E E+ K ++I + A + YLH + SIIH
Sbjct: 90 TAPQ-LAIVTQWCEGSSLYHHLHASETKFEM--KKLIDIARQTARGMDYLH---AKSIIH 143
Query: 332 RDISSNNILLNSKLEAFVADFG--TARLLHADSSNRTLLAGTYGYIAPE---LAYTMVMT 386
RD+ SNNI L+ + DFG T + + S L+G+ ++APE + + +
Sbjct: 144 RDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYS 203
Query: 387 EKCDVYSFGVVTLEVLMGKHP 407
+ DVY+FG+V E++ G+ P
Sbjct: 204 FQSDVYAFGIVLYELMTGQLP 224
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 122/270 (45%), Gaps = 26/270 (9%)
Query: 209 IRYCIGTGGYGSVYKA--QLPNGK--VFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNI 264
I IG G +G V +LP + A+K L + + F +EA ++ Q H N+
Sbjct: 11 IEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNV 70
Query: 265 VKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHD 324
+ L G + +I E+ME GSL L N+ + + V +++ +A + YL
Sbjct: 71 IHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTV--IQLVGMLRGIAAGMKYL--- 125
Query: 325 CSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYG-----YIAPEL 379
+ +HR +++ NIL+NS L V+DFG +R L D+S+ T + G + APE
Sbjct: 126 ADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEA 185
Query: 380 AYTMVMTEKCDVYSFGVVTLEVL-MGKHPRDIXXXXXXXXDPKIMLIDVLDQRLPPPVDR 438
T DV+S+G+V EV+ G+ P + ++ D RLPPP+D
Sbjct: 186 IQYRKFTSASDVWSYGIVMWEVMSYGERP------YWDMTNQDVINAIEQDYRLPPPMDC 239
Query: 439 KVIRDILLISTVSFACLQSNPKSRPTMQSV 468
L++ C Q + RP +
Sbjct: 240 PSALHQLMLD-----CWQKDRNHRPKFGQI 264
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 131/294 (44%), Gaps = 41/294 (13%)
Query: 196 VYEDLIEATEDF---------DIRYCIGTGGYGSV--YKAQLPNGKVF--ALKKLHTSEE 242
YED + +F I +G G +G V + +LP+ K A+K L
Sbjct: 27 TYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT 86
Query: 243 LAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEYMERGSL--FCNLHNNEDAV 300
+ F EA ++ Q H NI++L G K + ++ EYME GSL F H+ + V
Sbjct: 87 EKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV 146
Query: 301 ELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHA 360
+ V +++ +A + YL +HRD+++ NIL+NS L V+DFG +R+L
Sbjct: 147 ----IQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED 199
Query: 361 DSSNRTLLAGT---YGYIAPELAYTMVMTEKCDVYSFGVVTLEVL-MGKHPRDIXXXXXX 416
D G + +PE T DV+S+G+V EV+ G+ P
Sbjct: 200 DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP----YWEMS 255
Query: 417 XXDPKIMLIDVLDQ--RLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSV 468
D +I +D+ RLPPP+D L++ C Q + +RP + +
Sbjct: 256 NQD----VIKAVDEGYRLPPPMDCPAALYQLMLD-----CWQKDRNNRPKFEQI 300
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 131/294 (44%), Gaps = 41/294 (13%)
Query: 196 VYEDLIEATEDF---------DIRYCIGTGGYGSV--YKAQLPNGKVF--ALKKLHTSEE 242
YED + +F I +G G +G V + +LP+ K A+K L
Sbjct: 25 TYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT 84
Query: 243 LAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEYMERGSL--FCNLHNNEDAV 300
+ F EA ++ Q H NI++L G K + ++ EYME GSL F H+ + V
Sbjct: 85 EKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV 144
Query: 301 ELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHA 360
+ V +++ +A + YL +HRD+++ NIL+NS L V+DFG +R+L
Sbjct: 145 ----IQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED 197
Query: 361 DSSNRTLLAGT---YGYIAPELAYTMVMTEKCDVYSFGVVTLEVL-MGKHPRDIXXXXXX 416
D G + +PE T DV+S+G+V EV+ G+ P
Sbjct: 198 DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP----YWEMS 253
Query: 417 XXDPKIMLIDVLDQ--RLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSV 468
D +I +D+ RLPPP+D L++ C Q + +RP + +
Sbjct: 254 NQD----VIKAVDEGYRLPPPMDCPAALYQLMLD-----CWQKDRNNRPKFEQI 298
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 131/294 (44%), Gaps = 41/294 (13%)
Query: 196 VYEDLIEATEDF---------DIRYCIGTGGYGSV--YKAQLPNGKVF--ALKKLHTSEE 242
+ED + +F I +G G +G V + +LP+ K A+K L
Sbjct: 27 TFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT 86
Query: 243 LAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEYMERGSL--FCNLHNNEDAV 300
+ F EA ++ Q H NI++L G K + ++ EYME GSL F H+ + V
Sbjct: 87 EKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV 146
Query: 301 ELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHA 360
+ V +++ +A + YL +HRD+++ NIL+NS L V+DFG AR+L
Sbjct: 147 ----IQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLARVLED 199
Query: 361 DSSNRTLLAGT---YGYIAPELAYTMVMTEKCDVYSFGVVTLEVL-MGKHPRDIXXXXXX 416
D G + +PE T DV+S+G+V EV+ G+ P
Sbjct: 200 DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP----YWEMS 255
Query: 417 XXDPKIMLIDVLDQ--RLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSV 468
D +I +D+ RLPPP+D L++ C Q + +RP + +
Sbjct: 256 NQD----VIKAVDEGYRLPPPMDCPAALYQLMLD-----CWQKDRNNRPKFEQI 300
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 131/294 (44%), Gaps = 41/294 (13%)
Query: 196 VYEDLIEATEDF---------DIRYCIGTGGYGSV--YKAQLPNGKVF--ALKKLHTSEE 242
YED + +F I +G G +G V + +LP+ K A+K L
Sbjct: 27 TYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT 86
Query: 243 LAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEYMERGSL--FCNLHNNEDAV 300
+ F EA ++ Q H NI++L G K + ++ EYME GSL F H+ + V
Sbjct: 87 EKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV 146
Query: 301 ELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHA 360
+ V +++ +A + YL +HRD+++ NIL+NS L V+DFG +R+L
Sbjct: 147 ----IQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED 199
Query: 361 DSSNRTLLAGT---YGYIAPELAYTMVMTEKCDVYSFGVVTLEVL-MGKHPRDIXXXXXX 416
D G + +PE T DV+S+G+V EV+ G+ P
Sbjct: 200 DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP----YWEMS 255
Query: 417 XXDPKIMLIDVLDQ--RLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSV 468
D +I +D+ RLPPP+D L++ C Q + +RP + +
Sbjct: 256 NQD----VIKAVDEGYRLPPPMDCPAALYQLMLD-----CWQKDRNNRPKFEQI 300
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 131/294 (44%), Gaps = 41/294 (13%)
Query: 196 VYEDLIEATEDF---------DIRYCIGTGGYGSV--YKAQLPNGKVF--ALKKLHTSEE 242
+ED + +F I +G G +G V + +LP+ K A+K L
Sbjct: 27 TFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT 86
Query: 243 LAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEYMERGSL--FCNLHNNEDAV 300
+ F EA ++ Q H NI++L G K + ++ EYME GSL F H+ + V
Sbjct: 87 EKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV 146
Query: 301 ELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHA 360
+ V +++ +A + YL +HRD+++ NIL+NS L V+DFG +R+L
Sbjct: 147 ----IQLVGMLRGIASGMKYL---SDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLED 199
Query: 361 DSSNRTLLAGT---YGYIAPELAYTMVMTEKCDVYSFGVVTLEVL-MGKHPRDIXXXXXX 416
D G + +PE T DV+S+G+V EV+ G+ P
Sbjct: 200 DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP----YWEMS 255
Query: 417 XXDPKIMLIDVLDQ--RLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSV 468
D +I +D+ RLPPP+D L++ C Q + +RP + +
Sbjct: 256 NQD----VIKAVDEGYRLPPPMDCPAALYQLMLD-----CWQKDRNNRPKFEQI 300
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 138/293 (47%), Gaps = 48/293 (16%)
Query: 203 ATEDFDIRYCIGTGGYGSVYKAQLPNGK-VFALKKL------HTSEELAFIKSFKNEAQV 255
A + + IG GG+G V+K +L K V A+K L +E + + F+ E +
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 256 LSQVLHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMA 315
+S + H NIVKLYG + M + E++ G L+ L + A + W+ ++ ++ +A
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPRM--VMEFVPCGDLYHRLLDK--AHPIKWSVKLRLMLDIA 132
Query: 316 HALAYLHHDCSPSIIHRDISSNNILLNSKLE-----AFVADFGTARL-LHADSSNRTLLA 369
+ Y+ + +P I+HRD+ S NI L S E A VADFGT++ +H+ S L
Sbjct: 133 LGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSVHSVSG----LL 187
Query: 370 GTYGYIAPEL--AYTMVMTEKCDVYSFGVVTLEVLMGKHPRDIXXXXXXXXDPKIMLIDV 427
G + ++APE A TEK D YSF ++ +L G+ P D KI I++
Sbjct: 188 GNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYG------KIKFINM 241
Query: 428 LDQR-----LP---PPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEF 472
+ + +P PP R VI C +PK RP + +E
Sbjct: 242 IREEGLRPTIPEDCPPRLRNVIE----------LCWSGDPKKRPHFSYIVKEL 284
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 128/294 (43%), Gaps = 39/294 (13%)
Query: 195 IVYEDLIEATEDF---------DIRYCIGTGGYGSVYKAQL--PNGK--VFALKKLHTSE 241
+ED +A +F I IG G +G V +L P + A+K L
Sbjct: 10 FTFEDPNQAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGY 69
Query: 242 ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVE 301
+ F +EA ++ Q H NI+ L G K + +I EYME GSL L N+
Sbjct: 70 TDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFT 129
Query: 302 LDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHAD 361
+ + V +++ + + YL S +HRD+++ NIL+NS L V+DFG +R+L D
Sbjct: 130 V--IQLVGMLRGIGSGMKYLS---DMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDD 184
Query: 362 SSNRTLLAGT---YGYIAPELAYTMVMTEKCDVYSFGVVTLEVL-MGKHP-RDIXXXXXX 416
G + APE T DV+S+G+V EV+ G+ P D+
Sbjct: 185 PEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQD-- 242
Query: 417 XXDPKIMLIDVLDQ--RLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSV 468
+I +++ RLPPP+D + L++ C Q RP +
Sbjct: 243 -------VIKAIEEGYRLPPPMDCPIALHQLMLD-----CWQKERSDRPKFGQI 284
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 130/280 (46%), Gaps = 33/280 (11%)
Query: 201 IEATEDFDIRYCIGTGGYGSV--YKAQLPNGKVF--ALKKLHTSEELAFIKSFKNEAQVL 256
++AT + I +G G +G V + +LP+ K A+K L + F EA ++
Sbjct: 30 LDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 88
Query: 257 SQVLHRNIVKLYGYCLHKKCMFLIYEYMERGSL--FCNLHNNEDAVELDWAKRVNIVKAM 314
Q H NI++L G K + ++ EYME GSL F H+ + V + V +++ +
Sbjct: 89 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV----IQLVGMLRGI 144
Query: 315 AHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGT--- 371
A + YL +HRD+++ NIL+NS L V+DFG +R+L D G
Sbjct: 145 ASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 201
Query: 372 YGYIAPELAYTMVMTEKCDVYSFGVVTLEVL-MGKHPRDIXXXXXXXXDPKIMLIDVLDQ 430
+ +PE T DV+S+G+V EV+ G+ P D +I +D+
Sbjct: 202 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP----YWEMSNQD----VIKAVDE 253
Query: 431 --RLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSV 468
RLPPP+D L++ C Q + +RP + +
Sbjct: 254 GYRLPPPMDCPAALYQLMLD-----CWQKDRNNRPKFEQI 288
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 124/268 (46%), Gaps = 32/268 (11%)
Query: 213 IGTGGYGSVY--KAQLPNGKVF--ALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLY 268
+G G +G V + +LP+ K A+K L + F EA ++ Q H NI++L
Sbjct: 24 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 83
Query: 269 GYCLHKKCMFLIYEYMERGSL--FCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCS 326
G K + ++ EYME GSL F H+ + V + V +++ +A + YL
Sbjct: 84 GVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV----IQLVGMLRGIASGMKYL---SD 136
Query: 327 PSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGT---YGYIAPELAYTM 383
+HRD+++ NIL+NS L V+DFG +R+L D G + +PE
Sbjct: 137 MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR 196
Query: 384 VMTEKCDVYSFGVVTLEVL-MGKHPRDIXXXXXXXXDPKIMLIDVLDQ--RLPPPVDRKV 440
T DV+S+G+V EV+ G+ P D +I +D+ RLPPP+D
Sbjct: 197 KFTSASDVWSYGIVLWEVMSYGERP----YWEMSNQD----VIKAVDEGYRLPPPMDCPA 248
Query: 441 IRDILLISTVSFACLQSNPKSRPTMQSV 468
L++ C Q + +RP + +
Sbjct: 249 ALYQLMLD-----CWQKDRNNRPKFEQI 271
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 130/294 (44%), Gaps = 41/294 (13%)
Query: 196 VYEDLIEATEDF---------DIRYCIGTGGYGSV--YKAQLPNGKVF--ALKKLHTSEE 242
+ED + +F I +G G +G V + +LP+ K A+K L
Sbjct: 27 TFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT 86
Query: 243 LAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEYMERGSL--FCNLHNNEDAV 300
+ F EA ++ Q H NI++L G K + ++ EYME GSL F H+ + V
Sbjct: 87 EKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV 146
Query: 301 ELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHA 360
+ V +++ +A + YL +HRD+++ NIL+NS L V+DFG R+L
Sbjct: 147 ----IQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLED 199
Query: 361 DSSNRTLLAGT---YGYIAPELAYTMVMTEKCDVYSFGVVTLEVL-MGKHPRDIXXXXXX 416
D G + +PE T DV+S+G+V EV+ G+ P
Sbjct: 200 DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP----YWEMS 255
Query: 417 XXDPKIMLIDVLDQ--RLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSV 468
D +I +D+ RLPPP+D L++ C Q + +RP + +
Sbjct: 256 NQD----VIKAVDEGYRLPPPMDCPAALYQLMLD-----CWQKDRNNRPKFEQI 300
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 100/204 (49%), Gaps = 14/204 (6%)
Query: 213 IGTGGYGSVYKAQL--PNGKV---FALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKL 267
IG G +G VYK L +GK A+K L F EA ++ Q H NI++L
Sbjct: 52 IGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRL 111
Query: 268 YGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSP 327
G K M +I EYME G+L L + E + V +++ +A + YL +
Sbjct: 112 EGVISKYKPMMIITEYMENGALDKFLREKDG--EFSVLQLVGMLRGIAAGMKYL---ANM 166
Query: 328 SIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGT---YGYIAPELAYTMV 384
+ +HRD+++ NIL+NS L V+DFG +R+L D +G + APE
Sbjct: 167 NYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRK 226
Query: 385 MTEKCDVYSFGVVTLEVLM-GKHP 407
T DV+SFG+V EV+ G+ P
Sbjct: 227 FTSASDVWSFGIVMWEVMTYGERP 250
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 125/272 (45%), Gaps = 32/272 (11%)
Query: 209 IRYCIGTGGYGSV--YKAQLPNGKVF--ALKKLHTSEELAFIKSFKNEAQVLSQVLHRNI 264
I +G G +G V + +LP+ K A+K L + F EA ++ Q H NI
Sbjct: 49 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNI 108
Query: 265 VKLYGYCLHKKCMFLIYEYMERGSL--FCNLHNNEDAVELDWAKRVNIVKAMAHALAYLH 322
++L G K + ++ EYME GSL F H+ + V + V +++ +A + YL
Sbjct: 109 IRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV----IQLVGMLRGIASGMKYL- 163
Query: 323 HDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGT---YGYIAPEL 379
+HRD+++ NIL+NS L V+DFG +R+L D G + +PE
Sbjct: 164 --SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEA 221
Query: 380 AYTMVMTEKCDVYSFGVVTLEVL-MGKHPRDIXXXXXXXXDPKIMLIDVLDQ--RLPPPV 436
T DV+S+G+V EV+ G+ P D +I +D+ RLPPP+
Sbjct: 222 IAYRKFTSASDVWSYGIVLWEVMSYGERP----YWEMSNQD----VIKAVDEGYRLPPPM 273
Query: 437 DRKVIRDILLISTVSFACLQSNPKSRPTMQSV 468
D L++ C Q + +RP + +
Sbjct: 274 DCPAALYQLMLD-----CWQKDRNNRPKFEQI 300
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 131/294 (44%), Gaps = 41/294 (13%)
Query: 196 VYEDLIEATEDF---------DIRYCIGTGGYGSV--YKAQLPNGKVF--ALKKLHTSEE 242
+ED + +F I +G G +G V + +LP+ K A+K L
Sbjct: 27 TFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT 86
Query: 243 LAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEYMERGSL--FCNLHNNEDAV 300
+ F EA ++ Q H NI++L G K + ++ EYME GSL F H+ + V
Sbjct: 87 EKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV 146
Query: 301 ELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHA 360
+ V +++ +A + YL +HRD+++ NIL+NS L V+DFG +R+L
Sbjct: 147 ----IQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED 199
Query: 361 DSSNRTLLAGT---YGYIAPELAYTMVMTEKCDVYSFGVVTLEVL-MGKHPRDIXXXXXX 416
D G + +PE T DV+S+G+V EV+ G+ P
Sbjct: 200 DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP----YWEMS 255
Query: 417 XXDPKIMLIDVLDQ--RLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSV 468
D +I +D+ RLPPP+D L++ C Q + +RP + +
Sbjct: 256 NQD----VIKAVDEGYRLPPPMDCPAALYQLMLD-----CWQKDRNNRPKFEQI 300
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 121/271 (44%), Gaps = 30/271 (11%)
Query: 209 IRYCIGTGGYGSVYKAQL--PNGK--VFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNI 264
I IG G +G V +L P + A+K L + F +EA ++ Q H NI
Sbjct: 12 IEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNI 71
Query: 265 VKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHD 324
+ L G K + +I EYME GSL L N+ + + V +++ + + YL
Sbjct: 72 IHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTV--IQLVGMLRGIGSGMKYLS-- 127
Query: 325 CSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGT---YGYIAPELAY 381
S +HRD+++ NIL+NS L V+DFG +R+L D G + APE
Sbjct: 128 -DMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIA 186
Query: 382 TMVMTEKCDVYSFGVVTLEVL-MGKHP-RDIXXXXXXXXDPKIMLIDVLDQ--RLPPPVD 437
T DV+S+G+V EV+ G+ P D+ +I +++ RLPPP+D
Sbjct: 187 YRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQD---------VIKAIEEGYRLPPPMD 237
Query: 438 RKVIRDILLISTVSFACLQSNPKSRPTMQSV 468
+ L++ C Q RP +
Sbjct: 238 CPIALHQLMLD-----CWQKERSDRPKFGQI 263
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 121/271 (44%), Gaps = 30/271 (11%)
Query: 209 IRYCIGTGGYGSVYKAQL--PNGK--VFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNI 264
I IG G +G V +L P + A+K L + F +EA ++ Q H NI
Sbjct: 18 IEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNI 77
Query: 265 VKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHD 324
+ L G K + +I EYME GSL L N+ + + V +++ + + YL
Sbjct: 78 IHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTV--IQLVGMLRGIGSGMKYLS-- 133
Query: 325 CSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGT---YGYIAPELAY 381
S +HRD+++ NIL+NS L V+DFG +R+L D G + APE
Sbjct: 134 -DMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIA 192
Query: 382 TMVMTEKCDVYSFGVVTLEVL-MGKHP-RDIXXXXXXXXDPKIMLIDVLDQ--RLPPPVD 437
T DV+S+G+V EV+ G+ P D+ +I +++ RLPPP+D
Sbjct: 193 YRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQD---------VIKAIEEGYRLPPPMD 243
Query: 438 RKVIRDILLISTVSFACLQSNPKSRPTMQSV 468
+ L++ C Q RP +
Sbjct: 244 CPIALHQLMLD-----CWQKERSDRPKFGQI 269
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 103/205 (50%), Gaps = 21/205 (10%)
Query: 213 IGTGGYGSVYK-AQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYC 271
+G G +G K G+V +K+L +E ++F E +V+ + H N++K G
Sbjct: 18 LGKGCFGQAIKVTHRETGEVMVMKELIRFDEET-QRTFLKEVKVMRCLEHPNVLKFIGVL 76
Query: 272 LHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIH 331
K + I EY++ G+L + + + + W++RV+ K +A +AYLH S +IIH
Sbjct: 77 YKDKRLNFITEYIKGGTLRGIIKSMDS--QYPWSQRVSFAKDIASGMAYLH---SMNIIH 131
Query: 332 RDISSNNILLNSKLEAFVADFGTARLL--------------HADSSNRTLLAGTYGYIAP 377
RD++S+N L+ VADFG ARL+ D R + G ++AP
Sbjct: 132 RDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAP 191
Query: 378 ELAYTMVMTEKCDVYSFGVVTLEVL 402
E+ EK DV+SFG+V E++
Sbjct: 192 EMINGRSYDEKVDVFSFGIVLCEII 216
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 103/212 (48%), Gaps = 19/212 (8%)
Query: 202 EATEDFDIRYCIGTGGYGSVYKA-QLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVL 260
+ E FD+ +G G YGSVYKA G++ A+K++ +L + E ++ Q
Sbjct: 26 QPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDL---QEIIKEISIMQQCD 82
Query: 261 HRNIVKLYGYCLHKKCMFLIYEYMERGSL--FCNLHNN---EDAVELDWAKRVNIVKAMA 315
++VK YG ++++ EY GS+ L N ED + I+++
Sbjct: 83 SPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEI-------ATILQSTL 135
Query: 316 HALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYI 375
L YLH IHRDI + NILLN++ A +ADFG A L + R + GT ++
Sbjct: 136 KGLEYLHFMRK---IHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXVIGTPFWM 192
Query: 376 APELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
APE+ + D++S G+ +E+ GK P
Sbjct: 193 APEVIQEIGYNCVADIWSLGITAIEMAEGKPP 224
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 86/293 (29%), Positives = 137/293 (46%), Gaps = 48/293 (16%)
Query: 203 ATEDFDIRYCIGTGGYGSVYKAQLPNGK-VFALKKL------HTSEELAFIKSFKNEAQV 255
A + + IG GG+G V+K +L K V A+K L +E + + F+ E +
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 256 LSQVLHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMA 315
+S + H NIVKLYG + M + E++ G L+ L + A + W+ ++ ++ +A
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPRM--VMEFVPCGDLYHRLLDK--AHPIKWSVKLRLMLDIA 132
Query: 316 HALAYLHHDCSPSIIHRDISSNNILLNSKLE-----AFVADFG-TARLLHADSSNRTLLA 369
+ Y+ + +P I+HRD+ S NI L S E A VADFG + + +H+ S L
Sbjct: 133 LGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSVSG----LL 187
Query: 370 GTYGYIAPEL--AYTMVMTEKCDVYSFGVVTLEVLMGKHPRDIXXXXXXXXDPKIMLIDV 427
G + ++APE A TEK D YSF ++ +L G+ P D KI I++
Sbjct: 188 GNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYG------KIKFINM 241
Query: 428 LDQR-----LP---PPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEF 472
+ + +P PP R VI C +PK RP + +E
Sbjct: 242 IREEGLRPTIPEDCPPRLRNVIE----------LCWSGDPKKRPHFSYIVKEL 284
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 130/294 (44%), Gaps = 41/294 (13%)
Query: 196 VYEDLIEATEDF---------DIRYCIGTGGYGSV--YKAQLPNGKVF--ALKKLHTSEE 242
YED + +F I +G G +G V + +LP+ K A+K L
Sbjct: 27 TYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT 86
Query: 243 LAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEYMERGSL--FCNLHNNEDAV 300
+ F EA ++ Q H NI++L G K + ++ E ME GSL F H+ + V
Sbjct: 87 EKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTV 146
Query: 301 ELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHA 360
+ V +++ +A + YL +HRD+++ NIL+NS L V+DFG +R+L
Sbjct: 147 ----IQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED 199
Query: 361 DSSNRTLLAGT---YGYIAPELAYTMVMTEKCDVYSFGVVTLEVL-MGKHPRDIXXXXXX 416
D G + +PE T DV+S+G+V EV+ G+ P
Sbjct: 200 DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP----YWEMS 255
Query: 417 XXDPKIMLIDVLDQ--RLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSV 468
D +I +D+ RLPPP+D L++ C Q + +RP + +
Sbjct: 256 NQD----VIKAVDEGYRLPPPMDCPAALYQLMLD-----CWQKDRNNRPKFEQI 300
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 128/268 (47%), Gaps = 31/268 (11%)
Query: 213 IGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCL 272
+G G +G V+ A+K L +SF EAQ++ ++ H +V+LY +
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTLKPG--TMSPESFLEEAQIMKKLKHDKLVQLYA-VV 73
Query: 273 HKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHR 332
++ ++++ EYM +GSL L + E L V++ +A +AY+ + IHR
Sbjct: 74 SEEPIYIVTEYMNKGSLLDFLKDGEGRA-LKLPNLVDMAAQVAAGMAYIER---MNYIHR 129
Query: 333 DISSNNILLNSKLEAFVADFGTARLLHA-DSSNRTLLAGTYGYIAPELAYTMVMTEKCDV 391
D+ S NIL+ + L +ADFG ARL+ + + R + APE A T K DV
Sbjct: 130 DLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDV 189
Query: 392 YSFGVVTLE-VLMGKHPRDIXXXXXXXXDPKIMLIDVLDQ-----RLPPPVDRKVIRDIL 445
+SFG++ E V G+ P P + +VL+Q R+P P D + L
Sbjct: 190 WSFGILLTELVTKGRVPY-----------PGMNNREVLEQVERGYRMPCPQDCPISLHEL 238
Query: 446 LISTVSFACLQSNPKSRPTMQSVSQEFL 473
+I C + +P+ RPT + + Q FL
Sbjct: 239 MIH-----CWKKDPEERPTFEYL-QSFL 260
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 118/216 (54%), Gaps = 21/216 (9%)
Query: 201 IEATEDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLH----TSEELAFIKSFKNEAQVL 256
IEA+E + IG+G +G+VYK + +G V A+K L T E+ ++F+NE VL
Sbjct: 33 IEASEVM-LSTRIGSGSFGTVYKGKW-HGDV-AVKILKVVDPTPEQF---QAFRNEVAVL 86
Query: 257 SQVLHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAH 316
+ H NI+ GY + K + ++ ++ E SL+ +LH E ++ + ++I + A
Sbjct: 87 RKTRHVNILLFMGY-MTKDNLAIVTQWCEGSSLYKHLHVQETKFQM--FQLIDIARQTAQ 143
Query: 317 ALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLL--AGTYGY 374
+ YLH + +IIHRD+ SNNI L+ L + DFG A + S ++ + G+ +
Sbjct: 144 GMDYLH---AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLW 200
Query: 375 IAPELAYTM---VMTEKCDVYSFGVVTLEVLMGKHP 407
+APE+ + + DVYS+G+V E++ G+ P
Sbjct: 201 MAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELP 236
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 130/294 (44%), Gaps = 41/294 (13%)
Query: 196 VYEDLIEATEDF---------DIRYCIGTGGYGSV--YKAQLPNGKVF--ALKKLHTSEE 242
+ED + +F I +G G +G V + +LP+ K A+K L
Sbjct: 27 TFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT 86
Query: 243 LAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEYMERGSL--FCNLHNNEDAV 300
+ F EA ++ Q H NI++L G K + ++ E ME GSL F H+ + V
Sbjct: 87 EKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTV 146
Query: 301 ELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHA 360
+ V +++ +A + YL +HRD+++ NIL+NS L V+DFG +R+L
Sbjct: 147 ----IQLVGMLRGIASGMKYL---SDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLED 199
Query: 361 DSSNRTLLAGT---YGYIAPELAYTMVMTEKCDVYSFGVVTLEVL-MGKHPRDIXXXXXX 416
D G + +PE T DV+S+G+V EV+ G+ P
Sbjct: 200 DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP----YWEMS 255
Query: 417 XXDPKIMLIDVLDQ--RLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSV 468
D +I +D+ RLPPP+D L++ C Q + +RP + +
Sbjct: 256 NQD----VIKAVDEGYRLPPPMDCPAALYQLMLD-----CWQKDRNNRPKFEQI 300
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 129/280 (46%), Gaps = 33/280 (11%)
Query: 201 IEATEDFDIRYCIGTGGYGSVY--KAQLPNGKVF--ALKKLHTSEELAFIKSFKNEAQVL 256
++AT + I +G G +G V + +LP+ K A+K L + F EA ++
Sbjct: 13 LDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 71
Query: 257 SQVLHRNIVKLYGYCLHKKCMFLIYEYMERGSL--FCNLHNNEDAVELDWAKRVNIVKAM 314
Q H NI++L G K + ++ E ME GSL F H+ + V + V +++ +
Sbjct: 72 GQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTV----IQLVGMLRGI 127
Query: 315 AHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGT--- 371
A + YL +HRD+++ NIL+NS L V+DFG +R+L D G
Sbjct: 128 ASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 184
Query: 372 YGYIAPELAYTMVMTEKCDVYSFGVVTLEVL-MGKHPRDIXXXXXXXXDPKIMLIDVLDQ 430
+ +PE T DV+S+G+V EV+ G+ P D +I +D+
Sbjct: 185 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP----YWEMSNQD----VIKAVDE 236
Query: 431 --RLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSV 468
RLPPP+D L++ C Q + +RP + +
Sbjct: 237 GYRLPPPMDCPAALYQLMLD-----CWQKDRNNRPKFEQI 271
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 123/290 (42%), Gaps = 33/290 (11%)
Query: 196 VYEDLIEATEDF---------DIRYCIGTGGYGSVY--KAQLPNGKVF--ALKKLHTSEE 242
YED +A +F I IG G +G V + +LP + A+K L
Sbjct: 4 TYEDPNQAVHEFAKEIEASCITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYT 63
Query: 243 LAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVEL 302
+ F EA ++ Q H NI+ L G K + ++ EYME GSL L N+ +
Sbjct: 64 EKQRRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTV 123
Query: 303 DWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADS 362
+ V +++ ++ + YL +HRD+++ NIL+NS L V+DFG +R+L D
Sbjct: 124 --IQLVGMLRGISAGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDP 178
Query: 363 SNRTLLAGT---YGYIAPELAYTMVMTEKCDVYSFGVVTLEVL-MGKHPRDIXXXXXXXX 418
G + APE T DV+S+G+V EV+ G+ P
Sbjct: 179 EAAYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERP------YWEMT 232
Query: 419 DPKIMLIDVLDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSV 468
+ ++ RLP P+D L++ C Q SRP +
Sbjct: 233 NQDVIKAVEEGYRLPSPMDCPAALYQLMLD-----CWQKERNSRPKFDEI 277
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 132/277 (47%), Gaps = 33/277 (11%)
Query: 205 EDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNI 264
E + +G G +G V+ A+K L ++F EAQV+ ++ H +
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG--TMSPEAFLQEAQVMKKLRHEKL 75
Query: 265 VKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHD 324
V+LY + ++ ++++ EYM +GSL + E L + V++ +A +AY+
Sbjct: 76 VQLYA-VVSEEPIYIVTEYMSKGSLL-DFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 133
Query: 325 CSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADS-SNRTLLAGTYGYIAPELAYTM 383
+ +HRD+++ NIL+ L VADFG ARL+ + + R + APE A
Sbjct: 134 ---NYVHRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYG 190
Query: 384 VMTEKCDVYSFGVVTLEVLM-GKHPRDIXXXXXXXXDPKIMLIDVLDQ-----RLP-PPV 436
T K DV+SFG++ E+ G+ P P ++ +VLDQ R+P PP
Sbjct: 191 RFTIKSDVWSFGILLTELTTKGRVPY-----------PGMVNREVLDQVERGYRMPCPPE 239
Query: 437 DRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFL 473
+ + D++ C + +P+ RPT + + Q FL
Sbjct: 240 CPESLHDLMC------QCWRKDPEERPTFEYL-QAFL 269
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 131/277 (47%), Gaps = 33/277 (11%)
Query: 205 EDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNI 264
E + +G G +G V+ A+K L ++F EAQV+ ++ H +
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG--TMSPEAFLQEAQVMKKIRHEKL 75
Query: 265 VKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHD 324
V+LY + ++ ++++ EYM +GSL + E L + V++ +A +AY+
Sbjct: 76 VQLYA-VVSEEPIYIVTEYMSKGSLL-DFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 133
Query: 325 CSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADS-SNRTLLAGTYGYIAPELAYTM 383
+ +HRD+ + NIL+ L VADFG ARL+ + + R + APE A
Sbjct: 134 ---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYG 190
Query: 384 VMTEKCDVYSFGVVTLEVLM-GKHPRDIXXXXXXXXDPKIMLIDVLDQ-----RLP-PPV 436
T K DV+SFG++ E+ G+ P P ++ +VLDQ R+P PP
Sbjct: 191 RFTIKSDVWSFGILLTELTTKGRVPY-----------PGMVNREVLDQVERGYRMPCPPE 239
Query: 437 DRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFL 473
+ + D++ C + +P+ RPT + + Q FL
Sbjct: 240 CPESLHDLMC------QCWRKDPEERPTFEYL-QAFL 269
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 130/277 (46%), Gaps = 33/277 (11%)
Query: 205 EDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNI 264
E + +G G +G V+ A+K L ++F EAQV+ ++ H +
Sbjct: 11 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG--TMSPEAFLQEAQVMKKLRHEKL 68
Query: 265 VKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHD 324
V+LY + ++ ++++ EYM +GSL + E L + V++ +A +AY+
Sbjct: 69 VQLYA-VVSEEPIYIVTEYMSKGSLL-DFLKGETGKYLRLPQLVDMAAQIASGMAYVERM 126
Query: 325 CSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADS-SNRTLLAGTYGYIAPELAYTM 383
+ +HRD+ + NIL+ L VADFG ARL+ + + R + APE A
Sbjct: 127 ---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYG 183
Query: 384 VMTEKCDVYSFGVVTLEVLM-GKHPRDIXXXXXXXXDPKIMLIDVLDQ-----RLP-PPV 436
T K DV+SFG++ E+ G+ P P ++ +VLDQ R+P PP
Sbjct: 184 RFTIKSDVWSFGILLTELTTKGRVPY-----------PGMVNREVLDQVERGYRMPCPPE 232
Query: 437 DRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFL 473
+ + D++ C + P+ RPT + + Q FL
Sbjct: 233 CPESLHDLMC------QCWRKEPEERPTFEYL-QAFL 262
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 130/277 (46%), Gaps = 33/277 (11%)
Query: 205 EDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNI 264
E + +G G +G V+ A+K L ++F EAQV+ ++ H +
Sbjct: 267 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG--TMSPEAFLQEAQVMKKLRHEKL 324
Query: 265 VKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHD 324
V+LY + ++ ++++ EYM +GSL + E L + V++ +A +AY+
Sbjct: 325 VQLYA-VVSEEPIYIVTEYMSKGSLL-DFLKGETGKYLRLPQLVDMAAQIASGMAYVERM 382
Query: 325 CSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADS-SNRTLLAGTYGYIAPELAYTM 383
+ +HRD+ + NIL+ L VADFG ARL+ + + R + APE A
Sbjct: 383 ---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYG 439
Query: 384 VMTEKCDVYSFGVVTLEVLM-GKHPRDIXXXXXXXXDPKIMLIDVLDQ-----RLP-PPV 436
T K DV+SFG++ E+ G+ P P ++ +VLDQ R+P PP
Sbjct: 440 RFTIKSDVWSFGILLTELTTKGRVPY-----------PGMVNREVLDQVERGYRMPCPPE 488
Query: 437 DRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFL 473
+ + D++ C + P+ RPT + + Q FL
Sbjct: 489 CPESLHDLMC------QCWRKEPEERPTFEYL-QAFL 518
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 131/277 (47%), Gaps = 33/277 (11%)
Query: 205 EDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNI 264
E + +G G +G V+ A+K L ++F EAQV+ ++ H +
Sbjct: 7 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG--TMSPEAFLQEAQVMKKLRHEKL 64
Query: 265 VKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHD 324
V+LY + ++ ++++ EYM +GSL + E L + V++ +A +AY+
Sbjct: 65 VQLYA-VVSEEPIYIVTEYMSKGSLL-DFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 122
Query: 325 CSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADS-SNRTLLAGTYGYIAPELAYTM 383
+ +HRD+ + NIL+ L VADFG ARL+ + + R + APE A
Sbjct: 123 ---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYG 179
Query: 384 VMTEKCDVYSFGVVTLEVLM-GKHPRDIXXXXXXXXDPKIMLIDVLDQ-----RLP-PPV 436
T K DV+SFG++ E+ G+ P P ++ +VLDQ R+P PP
Sbjct: 180 RFTIKSDVWSFGILLTELTTKGRVPY-----------PGMVNREVLDQVERGYRMPCPPE 228
Query: 437 DRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFL 473
+ + D++ C + +P+ RPT + + Q FL
Sbjct: 229 CPESLHDLMC------QCWRKDPEERPTFEYL-QAFL 258
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 131/277 (47%), Gaps = 33/277 (11%)
Query: 205 EDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNI 264
E + +G G +G V+ A+K L ++F EAQV+ ++ H +
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG--TMSPEAFLQEAQVMKKLRHEKL 75
Query: 265 VKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHD 324
V+LY + ++ ++++ EYM +GSL + E L + V++ +A +AY+
Sbjct: 76 VQLYA-VVSEEPIYIVIEYMSKGSLL-DFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 133
Query: 325 CSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHA-DSSNRTLLAGTYGYIAPELAYTM 383
+ +HRD+ + NIL+ L VADFG ARL+ + + R + APE A
Sbjct: 134 ---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYG 190
Query: 384 VMTEKCDVYSFGVVTLEVLM-GKHPRDIXXXXXXXXDPKIMLIDVLDQ-----RLP-PPV 436
T K DV+SFG++ E+ G+ P P ++ +VLDQ R+P PP
Sbjct: 191 RFTIKSDVWSFGILLTELTTKGRVPY-----------PGMVNREVLDQVERGYRMPCPPE 239
Query: 437 DRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFL 473
+ + D++ C + +P+ RPT + + Q FL
Sbjct: 240 CPESLHDLMC------QCWRKDPEERPTFEYL-QAFL 269
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 130/277 (46%), Gaps = 33/277 (11%)
Query: 205 EDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNI 264
E + +G G +G V+ A+K L ++F EAQV+ ++ H +
Sbjct: 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG--TMSPEAFLQEAQVMKKLRHEKL 241
Query: 265 VKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHD 324
V+LY + ++ ++++ EYM +GSL + E L + V++ +A +AY+
Sbjct: 242 VQLYA-VVSEEPIYIVTEYMSKGSLL-DFLKGETGKYLRLPQLVDMAAQIASGMAYVER- 298
Query: 325 CSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADS-SNRTLLAGTYGYIAPELAYTM 383
+ +HRD+ + NIL+ L VADFG ARL+ + + R + APE A
Sbjct: 299 --MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYG 356
Query: 384 VMTEKCDVYSFGVVTLEVLM-GKHPRDIXXXXXXXXDPKIMLIDVLDQ-----RLP-PPV 436
T K DV+SFG++ E+ G+ P P ++ +VLDQ R+P PP
Sbjct: 357 RFTIKSDVWSFGILLTELTTKGRVPY-----------PGMVNREVLDQVERGYRMPCPPE 405
Query: 437 DRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFL 473
+ + D++ C + P+ RPT + + Q FL
Sbjct: 406 CPESLHDLMC------QCWRKEPEERPTFEYL-QAFL 435
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 136/293 (46%), Gaps = 48/293 (16%)
Query: 203 ATEDFDIRYCIGTGGYGSVYKAQLPNGK-VFALKKL------HTSEELAFIKSFKNEAQV 255
A + + IG GG+G V+K +L K V A+K L +E + + F+ E +
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 256 LSQVLHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMA 315
+S + H NIVKLYG + M + E++ G L+ L + A + W+ ++ ++ +A
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPRM--VMEFVPCGDLYHRLLDK--AHPIKWSVKLRLMLDIA 132
Query: 316 HALAYLHHDCSPSIIHRDISSNNILLNSKLE-----AFVADFG-TARLLHADSSNRTLLA 369
+ Y+ + +P I+HRD+ S NI L S E A VADF + + +H+ S L
Sbjct: 133 LGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSVHSVSG----LL 187
Query: 370 GTYGYIAPEL--AYTMVMTEKCDVYSFGVVTLEVLMGKHPRDIXXXXXXXXDPKIMLIDV 427
G + ++APE A TEK D YSF ++ +L G+ P D KI I++
Sbjct: 188 GNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYG------KIKFINM 241
Query: 428 LDQR-----LP---PPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEF 472
+ + +P PP R VI C +PK RP + +E
Sbjct: 242 IREEGLRPTIPEDCPPRLRNVIE----------LCWSGDPKKRPHFSYIVKEL 284
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 130/277 (46%), Gaps = 33/277 (11%)
Query: 205 EDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNI 264
E + +G G +G V+ A+K L ++F EAQV+ ++ H +
Sbjct: 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG--TMSPEAFLQEAQVMKKLRHEKL 241
Query: 265 VKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHD 324
V+LY + ++ ++++ EYM +GSL + E L + V++ +A +AY+
Sbjct: 242 VQLYA-VVSEEPIYIVTEYMSKGSLL-DFLKGETGKYLRLPQLVDMAAQIASGMAYVER- 298
Query: 325 CSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADS-SNRTLLAGTYGYIAPELAYTM 383
+ +HRD+ + NIL+ L VADFG ARL+ + + R + APE A
Sbjct: 299 --MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYG 356
Query: 384 VMTEKCDVYSFGVVTLEVLM-GKHPRDIXXXXXXXXDPKIMLIDVLDQ-----RLP-PPV 436
T K DV+SFG++ E+ G+ P P ++ +VLDQ R+P PP
Sbjct: 357 RFTIKSDVWSFGILLTELTTKGRVPY-----------PGMVNREVLDQVERGYRMPCPPE 405
Query: 437 DRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFL 473
+ + D++ C + P+ RPT + + Q FL
Sbjct: 406 CPESLHDLMC------QCWRKEPEERPTFEYL-QAFL 435
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 131/277 (47%), Gaps = 33/277 (11%)
Query: 205 EDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNI 264
E + +G G +G V+ A+K L ++F EAQV+ ++ H +
Sbjct: 9 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG--TMSPEAFLQEAQVMKKLRHEKL 66
Query: 265 VKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHD 324
V+LY + ++ ++++ EYM +GSL + E L + V++ +A +AY+
Sbjct: 67 VQLYA-VVSEEPIYIVTEYMSKGSLL-DFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 124
Query: 325 CSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADS-SNRTLLAGTYGYIAPELAYTM 383
+ +HRD+ + NIL+ L VADFG ARL+ + + R + APE A
Sbjct: 125 ---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYG 181
Query: 384 VMTEKCDVYSFGVVTLEVLM-GKHPRDIXXXXXXXXDPKIMLIDVLDQ-----RLP-PPV 436
T K DV+SFG++ E+ G+ P P ++ +VLDQ R+P PP
Sbjct: 182 RFTIKSDVWSFGILLTELTTKGRVPY-----------PGMVNREVLDQVERGYRMPCPPE 230
Query: 437 DRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFL 473
+ + D++ C + +P+ RPT + + Q FL
Sbjct: 231 CPESLHDLMC------QCWRKDPEERPTFEYL-QAFL 260
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 103/204 (50%), Gaps = 7/204 (3%)
Query: 205 EDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKL-HTSEELAFIKSFKNEAQVLSQVLHR 262
ED+++ Y IGTG YG K + +GK+ K+L + S A + +E +L ++ H
Sbjct: 6 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHP 65
Query: 263 NIVKLYGYCLHKK--CMFLIYEYMERGSLFCNL-HNNEDAVELDWAKRVNIVKAMAHALA 319
NIV+ Y + + ++++ EY E G L + ++ LD + ++ + AL
Sbjct: 66 NIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALK 125
Query: 320 YLHH--DCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAP 377
H D +++HRD+ N+ L+ K + DFG AR+L+ D+S GT Y++P
Sbjct: 126 ECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMSP 185
Query: 378 ELAYTMVMTEKCDVYSFGVVTLEV 401
E M EK D++S G + E+
Sbjct: 186 EQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 131/277 (47%), Gaps = 33/277 (11%)
Query: 205 EDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNI 264
E + +G G +G V+ A+K L ++F EAQV+ ++ H +
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG--TMSPEAFLQEAQVMKKLRHEKL 75
Query: 265 VKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHD 324
V+LY + ++ ++++ EYM +GSL + E L + V++ +A +AY+
Sbjct: 76 VQLYA-VVSEEPIYIVTEYMSKGSLL-DFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 133
Query: 325 CSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADS-SNRTLLAGTYGYIAPELAYTM 383
+ +HRD+ + NIL+ L VADFG ARL+ + + R + APE A
Sbjct: 134 ---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYG 190
Query: 384 VMTEKCDVYSFGVVTLEVLM-GKHPRDIXXXXXXXXDPKIMLIDVLDQ-----RLP-PPV 436
T K DV+SFG++ E+ G+ P P ++ +VLDQ R+P PP
Sbjct: 191 RFTIKSDVWSFGILLTELTTKGRVPY-----------PGMVNREVLDQVERGYRMPCPPE 239
Query: 437 DRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFL 473
+ + D++ C + +P+ RPT + + Q FL
Sbjct: 240 CPESLHDLMC------QCWRKDPEERPTFEYL-QAFL 269
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 131/277 (47%), Gaps = 33/277 (11%)
Query: 205 EDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNI 264
E + +G G +G V+ A+K L ++F EAQV+ ++ H +
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG--TMSPEAFLQEAQVMKKLRHEKL 75
Query: 265 VKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHD 324
V+LY + ++ ++++ EYM +GSL + E L + V++ +A +AY+
Sbjct: 76 VQLYA-VVSEEPIYIVIEYMSKGSLL-DFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 133
Query: 325 CSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADS-SNRTLLAGTYGYIAPELAYTM 383
+ +HRD+ + NIL+ L VADFG ARL+ + + R + APE A
Sbjct: 134 ---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYG 190
Query: 384 VMTEKCDVYSFGVVTLEVLM-GKHPRDIXXXXXXXXDPKIMLIDVLDQ-----RLP-PPV 436
T K DV+SFG++ E+ G+ P P ++ +VLDQ R+P PP
Sbjct: 191 RFTIKSDVWSFGILLTELTTKGRVPY-----------PGMVNREVLDQVERGYRMPCPPE 239
Query: 437 DRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFL 473
+ + D++ C + +P+ RPT + + Q FL
Sbjct: 240 CPESLHDLMC------QCWRKDPEERPTFEYL-QAFL 269
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 130/277 (46%), Gaps = 33/277 (11%)
Query: 205 EDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNI 264
E + +G G +G V+ A+K L ++F EAQV+ ++ H +
Sbjct: 15 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG--TMSPEAFLQEAQVMKKLRHEKL 72
Query: 265 VKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHD 324
V+LY + ++ ++++ EYM +GSL + E L + V++ +A +AY+
Sbjct: 73 VQLYA-VVSEEPIYIVTEYMNKGSLL-DFLKGETGKYLRLPQLVDMSAQIASGMAYVERM 130
Query: 325 CSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADS-SNRTLLAGTYGYIAPELAYTM 383
+ +HRD+ + NIL+ L VADFG ARL+ + + R + APE A
Sbjct: 131 ---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEAALYG 187
Query: 384 VMTEKCDVYSFGVVTLEVLM-GKHPRDIXXXXXXXXDPKIMLIDVLDQ-----RLP-PPV 436
T K DV+SFG++ E+ G+ P P ++ +VLDQ R+P PP
Sbjct: 188 RFTIKSDVWSFGILLTELTTKGRVPY-----------PGMVNREVLDQVERGYRMPCPPE 236
Query: 437 DRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFL 473
+ + D++ C + P+ RPT + + Q FL
Sbjct: 237 CPESLHDLMC------QCWRKEPEERPTFEYL-QAFL 266
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 103/204 (50%), Gaps = 7/204 (3%)
Query: 205 EDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKL-HTSEELAFIKSFKNEAQVLSQVLHR 262
ED+++ Y IGTG YG K + +GK+ K+L + S A + +E +L ++ H
Sbjct: 6 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHP 65
Query: 263 NIVKLYGYCLHKK--CMFLIYEYMERGSLFCNL-HNNEDAVELDWAKRVNIVKAMAHALA 319
NIV+ Y + + ++++ EY E G L + ++ LD + ++ + AL
Sbjct: 66 NIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALK 125
Query: 320 YLHH--DCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAP 377
H D +++HRD+ N+ L+ K + DFG AR+L+ D+S GT Y++P
Sbjct: 126 ECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSP 185
Query: 378 ELAYTMVMTEKCDVYSFGVVTLEV 401
E M EK D++S G + E+
Sbjct: 186 EQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 130/277 (46%), Gaps = 33/277 (11%)
Query: 205 EDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNI 264
E + +G G +G V+ A+K L ++F EAQV+ ++ H +
Sbjct: 15 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG--TMSPEAFLQEAQVMKKLRHEKL 72
Query: 265 VKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHD 324
V+LY + ++ ++++ EYM +GSL + E L + V++ +A +AY+
Sbjct: 73 VQLYA-VVSEEPIYIVTEYMNKGSLL-DFLKGETGKYLRLPQLVDMSAQIASGMAYVERM 130
Query: 325 CSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADS-SNRTLLAGTYGYIAPELAYTM 383
+ +HRD+ + NIL+ L VADFG ARL+ + + R + APE A
Sbjct: 131 ---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYG 187
Query: 384 VMTEKCDVYSFGVVTLEVLM-GKHPRDIXXXXXXXXDPKIMLIDVLDQ-----RLP-PPV 436
T K DV+SFG++ E+ G+ P P ++ +VLDQ R+P PP
Sbjct: 188 RFTIKSDVWSFGILLTELTTKGRVPY-----------PGMVNREVLDQVERGYRMPCPPE 236
Query: 437 DRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFL 473
+ + D++ C + P+ RPT + + Q FL
Sbjct: 237 CPESLHDLMC------QCWRKEPEERPTFEYL-QAFL 266
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 130/277 (46%), Gaps = 33/277 (11%)
Query: 205 EDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNI 264
E + +G G +G V+ A+K L ++F EAQV+ ++ H +
Sbjct: 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG--TMSPEAFLQEAQVMKKLRHEKL 241
Query: 265 VKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHD 324
V+LY + ++ ++++ EYM +GSL + E L + V++ +A +AY+
Sbjct: 242 VQLYA-VVSEEPIYIVGEYMSKGSLL-DFLKGETGKYLRLPQLVDMAAQIASGMAYVER- 298
Query: 325 CSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADS-SNRTLLAGTYGYIAPELAYTM 383
+ +HRD+ + NIL+ L VADFG ARL+ + + R + APE A
Sbjct: 299 --MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYG 356
Query: 384 VMTEKCDVYSFGVVTLEVLM-GKHPRDIXXXXXXXXDPKIMLIDVLDQ-----RLP-PPV 436
T K DV+SFG++ E+ G+ P P ++ +VLDQ R+P PP
Sbjct: 357 RFTIKSDVWSFGILLTELTTKGRVPY-----------PGMVNREVLDQVERGYRMPCPPE 405
Query: 437 DRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFL 473
+ + D++ C + P+ RPT + + Q FL
Sbjct: 406 CPESLHDLMC------QCWRKEPEERPTFEYL-QAFL 435
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 131/277 (47%), Gaps = 33/277 (11%)
Query: 205 EDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNI 264
E + +G G +G V+ A+K L ++F EAQV+ ++ H +
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG--TMSPEAFLQEAQVMKKLRHEKL 75
Query: 265 VKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHD 324
V+LY + ++ ++++ EYM +GSL + E L + V++ +A +AY+
Sbjct: 76 VQLYA-VVSEEPIYIVCEYMSKGSLL-DFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 133
Query: 325 CSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADS-SNRTLLAGTYGYIAPELAYTM 383
+ +HRD+ + NIL+ L VADFG ARL+ + + R + APE A
Sbjct: 134 ---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYG 190
Query: 384 VMTEKCDVYSFGVVTLEVLM-GKHPRDIXXXXXXXXDPKIMLIDVLDQ-----RLP-PPV 436
T K DV+SFG++ E+ G+ P P ++ +VLDQ R+P PP
Sbjct: 191 RFTIKSDVWSFGILLTELTTKGRVPY-----------PGMVNREVLDQVERGYRMPCPPE 239
Query: 437 DRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFL 473
+ + D++ C + +P+ RPT + + Q FL
Sbjct: 240 CPESLHDLMC------QCWRKDPEERPTFEYL-QAFL 269
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 129/277 (46%), Gaps = 33/277 (11%)
Query: 205 EDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNI 264
E + +G G +G V+ A+K L ++F EAQV+ ++ H +
Sbjct: 8 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG--TMSPEAFLQEAQVMKKLRHEKL 65
Query: 265 VKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHD 324
V+LY + ++ + ++ EYM +GSL + E L + V++ +A +AY+
Sbjct: 66 VQLYA-VVSEEPIXIVTEYMSKGSLL-DFLKGETGKYLRLPQLVDMAAQIASGMAYVERM 123
Query: 325 CSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHA-DSSNRTLLAGTYGYIAPELAYTM 383
+ +HRD+ + NIL+ L VADFG ARL+ + + R + APE A
Sbjct: 124 ---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYG 180
Query: 384 VMTEKCDVYSFGVVTLEVLM-GKHPRDIXXXXXXXXDPKIMLIDVLDQ-----RLP-PPV 436
T K DV+SFG++ E+ G+ P P ++ +VLDQ R+P PP
Sbjct: 181 RFTIKSDVWSFGILLTELTTKGRVPY-----------PGMVNREVLDQVERGYRMPCPPE 229
Query: 437 DRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFL 473
+ + D++ C + P+ RPT + + Q FL
Sbjct: 230 CPESLHDLMC------QCWRKEPEERPTFEYL-QAFL 259
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 115/265 (43%), Gaps = 19/265 (7%)
Query: 213 IGTGGYGSVYKA-QLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYC 271
IG G +G V+K KV A+K + E I+ + E VLSQ + K YG
Sbjct: 35 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 94
Query: 272 LHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIH 331
L +++I EY+ GS L LD + I++ + L YLH S IH
Sbjct: 95 LKDTKLWIIMEYLGGGSALDLLEPGP----LDETQIATILREILKGLDYLH---SEKKIH 147
Query: 332 RDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYTMVMTEKCDV 391
RDI + N+LL+ E +ADFG A L R GT ++APE+ K D+
Sbjct: 148 RDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADI 207
Query: 392 YSFGVVTLEVLMGKHPRDIXXXXXXXXDPKIMLIDVLDQRLPPPVDRKVIRDILLISTVS 451
+S G+ +E+ G+ P P +L ++ + PP ++ + +
Sbjct: 208 WSLGITAIELARGEPPHS-------ELHPMKVLF-LIPKNNPPTLEGNYSKP---LKEFV 256
Query: 452 FACLQSNPKSRPTMQSVSQEFLITR 476
ACL P RPT + + + I R
Sbjct: 257 EACLNKEPSFRPTAKELLKHKFILR 281
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 116/265 (43%), Gaps = 19/265 (7%)
Query: 213 IGTGGYGSVYKA-QLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYC 271
IG G +G V+K KV A+K + E I+ + E VLSQ + K YG
Sbjct: 30 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 89
Query: 272 LHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIH 331
L +++I EY+ GS L + LD + I++ + L YLH S IH
Sbjct: 90 LKDTKLWIIMEYLGGGSALDLL----EPGPLDETQIATILREILKGLDYLH---SEKKIH 142
Query: 332 RDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYTMVMTEKCDV 391
RDI + N+LL+ E +ADFG A L R GT ++APE+ K D+
Sbjct: 143 RDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSKADI 202
Query: 392 YSFGVVTLEVLMGKHPRDIXXXXXXXXDPKIMLIDVLDQRLPPPVDRKVIRDILLISTVS 451
+S G+ +E+ G+ P P +L ++ + PP ++ + +
Sbjct: 203 WSLGITAIELARGEPPHS-------ELHPMKVLF-LIPKNNPPTLEGNYSKP---LKEFV 251
Query: 452 FACLQSNPKSRPTMQSVSQEFLITR 476
ACL P RPT + + + I R
Sbjct: 252 EACLNKEPSFRPTAKELLKHKFILR 276
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 116/265 (43%), Gaps = 19/265 (7%)
Query: 213 IGTGGYGSVYKA-QLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYC 271
IG G +G V+K KV A+K + E I+ + E VLSQ + K YG
Sbjct: 15 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 74
Query: 272 LHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIH 331
L +++I EY+ GS L + LD + I++ + L YLH S IH
Sbjct: 75 LKDTKLWIIMEYLGGGSALDLL----EPGPLDETQIATILREILKGLDYLH---SEKKIH 127
Query: 332 RDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYTMVMTEKCDV 391
RDI + N+LL+ E +ADFG A L R GT ++APE+ K D+
Sbjct: 128 RDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSKADI 187
Query: 392 YSFGVVTLEVLMGKHPRDIXXXXXXXXDPKIMLIDVLDQRLPPPVDRKVIRDILLISTVS 451
+S G+ +E+ G+ P P +L ++ + PP ++ + +
Sbjct: 188 WSLGITAIELARGEPPHS-------ELHPMKVLF-LIPKNNPPTLEGNYSKP---LKEFV 236
Query: 452 FACLQSNPKSRPTMQSVSQEFLITR 476
ACL P RPT + + + I R
Sbjct: 237 EACLNKEPSFRPTAKELLKHKFILR 261
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 73/211 (34%), Positives = 98/211 (46%), Gaps = 24/211 (11%)
Query: 213 IGTGGYGSVYKAQLPNG---------KVFALKKLHTSEELAFIKSFK----NEAQVLSQV 259
+G+G YG V + NG K K S++ I+ F NE +L +
Sbjct: 44 LGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSL 103
Query: 260 LHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALA 319
H NI+KL+ KK +L+ E+ E G LF + N E D A NI+K + +
Sbjct: 104 DHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAA---NIMKQILSGIC 160
Query: 320 YLHHDCSPSIIHRDISSNNILL---NSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIA 376
YLH +I+HRDI NILL NS L + DFG + D R L Y YIA
Sbjct: 161 YLH---KHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAY-YIA 216
Query: 377 PELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
PE+ EKCDV+S GV+ +L G P
Sbjct: 217 PEVL-KKKYNEKCDVWSCGVIMYILLCGYPP 246
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 116/265 (43%), Gaps = 19/265 (7%)
Query: 213 IGTGGYGSVYKA-QLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYC 271
IG G +G V+K KV A+K + E I+ + E VLSQ + K YG
Sbjct: 15 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 74
Query: 272 LHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIH 331
L +++I EY+ GS L + LD + I++ + L YLH S IH
Sbjct: 75 LKDTKLWIIMEYLGGGSALDLL----EPGPLDETQIATILREILKGLDYLH---SEKKIH 127
Query: 332 RDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYTMVMTEKCDV 391
RDI + N+LL+ E +ADFG A L R GT ++APE+ K D+
Sbjct: 128 RDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADI 187
Query: 392 YSFGVVTLEVLMGKHPRDIXXXXXXXXDPKIMLIDVLDQRLPPPVDRKVIRDILLISTVS 451
+S G+ +E+ G+ P P +L ++ + PP ++ + +
Sbjct: 188 WSLGITAIELARGEPPHS-------ELHPMKVLF-LIPKNNPPTLEGNYSKP---LKEFV 236
Query: 452 FACLQSNPKSRPTMQSVSQEFLITR 476
ACL P RPT + + + I R
Sbjct: 237 EACLNKEPSFRPTAKELLKHKFILR 261
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 130/277 (46%), Gaps = 33/277 (11%)
Query: 205 EDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNI 264
E + +G G +G V+ A+K L ++F EAQV+ ++ H +
Sbjct: 185 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGN--MSPEAFLQEAQVMKKLRHEKL 242
Query: 265 VKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHD 324
V+LY + ++ ++++ EYM +GSL + E L + V++ +A +AY+
Sbjct: 243 VQLYA-VVSEEPIYIVTEYMSKGSLL-DFLKGEMGKYLRLPQLVDMAAQIASGMAYVER- 299
Query: 325 CSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADS-SNRTLLAGTYGYIAPELAYTM 383
+ +HRD+ + NIL+ L VADFG RL+ + + R + APE A
Sbjct: 300 --MNYVHRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAALYG 357
Query: 384 VMTEKCDVYSFGVVTLEVLM-GKHPRDIXXXXXXXXDPKIMLIDVLDQ-----RLP-PPV 436
T K DV+SFG++ E+ G+ P P ++ +VLDQ R+P PP
Sbjct: 358 RFTIKSDVWSFGILLTELTTKGRVPY-----------PGMVNREVLDQVERGYRMPCPPE 406
Query: 437 DRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFL 473
+ + D++ C + +P+ RPT + + Q FL
Sbjct: 407 CPESLHDLMC------QCWRKDPEERPTFEYL-QAFL 436
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 119/272 (43%), Gaps = 29/272 (10%)
Query: 213 IGTGGYGSVYKA-QLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYC 271
IG G +G V+K +V A+K + E I+ + E VLSQ + K YG
Sbjct: 31 IGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVTKYYGSY 90
Query: 272 LHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIH 331
L +++I EY+ GS L A D + ++K + L YLH S IH
Sbjct: 91 LKGSKLWIIMEYLGGGSALDLLR----AGPFDEFQIATMLKEILKGLDYLH---SEKKIH 143
Query: 332 RDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYTMVMTEKCDV 391
RDI + N+LL+ + + +ADFG A L R GT ++APE+ K D+
Sbjct: 144 RDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSKADI 203
Query: 392 YSFGVVTLEVLMGKHPRDIXXXXXXXXDPKIMLIDVLDQRLPPPVDRKVIRDILLISTVS 451
+S G+ +E+ G+ P D M + L + PP ++ D T S
Sbjct: 204 WSLGITAIELAKGEPPN---------SDMHPMRVLFLIPKNNPPT---LVGDF----TKS 247
Query: 452 F-----ACLQSNPKSRPTMQSVSQEFLITRKT 478
F ACL +P RPT + + + I + +
Sbjct: 248 FKEFIDACLNKDPSFRPTAKELLKHKFIVKNS 279
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 105/209 (50%), Gaps = 18/209 (8%)
Query: 205 EDFDIRYCIGTGGYGSVYKAQ-LPNGKVFALKKLHTS--EELAFIKSFKNEAQVLSQVLH 261
+DF I +GTG +G V+ + NG+ +A+K L L ++ +E +LS V H
Sbjct: 6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTH 65
Query: 262 RNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNE---DAVELDWAKRVNIVKAMAHAL 318
I++++G + +F+I +Y+E G LF L ++ + V +A V + AL
Sbjct: 66 PFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCL------AL 119
Query: 319 AYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPE 378
YLH S II+RD+ NILL+ + DFG A+ + L GT YIAPE
Sbjct: 120 EYLH---SKDIIYRDLKPENILLDKNGHIKITDFGFAKYV---PDVTYXLCGTPDYIAPE 173
Query: 379 LAYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
+ T + D +SFG++ E+L G P
Sbjct: 174 VVSTKPYNKSIDWWSFGILIYEMLAGYTP 202
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 130/277 (46%), Gaps = 33/277 (11%)
Query: 205 EDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNI 264
E + +G G +G V+ A+K L ++F EAQV+ ++ H +
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG--TMSPEAFLQEAQVMKKLRHEKL 75
Query: 265 VKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHD 324
V+LY + ++ ++++ EYM +G L + E L + V++ +A +AY+
Sbjct: 76 VQLYA-VVSEEPIYIVMEYMSKGCLL-DFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 133
Query: 325 CSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADS-SNRTLLAGTYGYIAPELAYTM 383
+ +HRD+ + NIL+ L VADFG ARL+ + + R + APE A
Sbjct: 134 ---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYG 190
Query: 384 VMTEKCDVYSFGVVTLEVLM-GKHPRDIXXXXXXXXDPKIMLIDVLDQ-----RLP-PPV 436
T K DV+SFG++ E+ G+ P P ++ +VLDQ R+P PP
Sbjct: 191 RFTIKSDVWSFGILLTELTTKGRVPY-----------PGMVNREVLDQVERGYRMPCPPE 239
Query: 437 DRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFL 473
+ + D++ C + +P+ RPT + + Q FL
Sbjct: 240 CPESLHDLMC------QCWRKDPEERPTFEYL-QAFL 269
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 130/277 (46%), Gaps = 33/277 (11%)
Query: 205 EDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNI 264
E + +G G +G V+ A+K L ++F EAQV+ ++ H +
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG--TMSPEAFLQEAQVMKKLRHEKL 75
Query: 265 VKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHD 324
V+LY + ++ ++++ EYM +G L + E L + V++ +A +AY+
Sbjct: 76 VQLYA-VVSEEPIYIVTEYMSKGCLL-DFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 133
Query: 325 CSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADS-SNRTLLAGTYGYIAPELAYTM 383
+ +HRD+ + NIL+ L VADFG ARL+ + + R + APE A
Sbjct: 134 ---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYG 190
Query: 384 VMTEKCDVYSFGVVTLEVLM-GKHPRDIXXXXXXXXDPKIMLIDVLDQ-----RLP-PPV 436
T K DV+SFG++ E+ G+ P P ++ +VLDQ R+P PP
Sbjct: 191 RFTIKSDVWSFGILLTELTTKGRVPY-----------PGMVNREVLDQVERGYRMPCPPE 239
Query: 437 DRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFL 473
+ + D++ C + +P+ RPT + + Q FL
Sbjct: 240 CPESLHDLMC------QCWRKDPEERPTFEYL-QAFL 269
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 131/282 (46%), Gaps = 39/282 (13%)
Query: 213 IGTGGYGSVYKA-QLPNGKVF----ALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKL 267
+G+G +G+VYK +P G+ A+K L+ + F +EA +++ + H ++V+L
Sbjct: 46 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 105
Query: 268 YGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVE----LDWAKRVNIVKAMAHALAYLHH 323
G CL + L+ + M G L +H ++D + L+W V I K M YL
Sbjct: 106 LGVCL-SPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWC--VQIAKGMM----YLEE 158
Query: 324 DCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTY--GYIAPELAY 381
++HRD+++ N+L+ S + DFG ARLL D G ++A E +
Sbjct: 159 R---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIH 215
Query: 382 TMVMTEKCDVYSFGVVTLEVL-MGKHPRDIXXXXXXXXDPKIMLIDVLD--QRLP-PPVD 437
T + DV+S+GV E++ G P D P + D+L+ +RLP PP+
Sbjct: 216 YRKFTHQSDVWSYGVTIWELMTFGGKPYDGI--------PTREIPDLLEKGERLPQPPI- 266
Query: 438 RKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTP 479
D+ + V C + SRP + ++ EF + P
Sbjct: 267 --CTIDVYM---VMVKCWMIDADSRPKFKELAAEFSRMARDP 303
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 131/282 (46%), Gaps = 39/282 (13%)
Query: 213 IGTGGYGSVYKA-QLPNGKVF----ALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKL 267
+G+G +G+VYK +P G+ A+K L+ + F +EA +++ + H ++V+L
Sbjct: 23 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 82
Query: 268 YGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVE----LDWAKRVNIVKAMAHALAYLHH 323
G CL + L+ + M G L +H ++D + L+W V I K M YL
Sbjct: 83 LGVCL-SPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWC--VQIAKGMM----YLEE 135
Query: 324 DCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTY--GYIAPELAY 381
++HRD+++ N+L+ S + DFG ARLL D G ++A E +
Sbjct: 136 R---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIH 192
Query: 382 TMVMTEKCDVYSFGVVTLEVL-MGKHPRDIXXXXXXXXDPKIMLIDVLD--QRLP-PPVD 437
T + DV+S+GV E++ G P D P + D+L+ +RLP PP+
Sbjct: 193 YRKFTHQSDVWSYGVTIWELMTFGGKPYDGI--------PTREIPDLLEKGERLPQPPI- 243
Query: 438 RKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTP 479
D+ + V C + SRP + ++ EF + P
Sbjct: 244 --CTIDVYM---VMVKCWMIDADSRPKFKELAAEFSRMARDP 280
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 101/205 (49%), Gaps = 7/205 (3%)
Query: 204 TEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKL-HTSEELAFIKSFKNEAQVLSQVLH 261
ED+++ Y IGTG YG K + +GK+ K+L + S A + +E +L ++ H
Sbjct: 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKH 64
Query: 262 RNIVKLYGYCLHKK--CMFLIYEYMERGSLFCNL-HNNEDAVELDWAKRVNIVKAMAHAL 318
NIV+ Y + + ++++ EY E G L + ++ LD + ++ + AL
Sbjct: 65 PNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLAL 124
Query: 319 AYLHH--DCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIA 376
H D +++HRD+ N+ L+ K + DFG AR+L+ D GT Y++
Sbjct: 125 KECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFVGTPYYMS 184
Query: 377 PELAYTMVMTEKCDVYSFGVVTLEV 401
PE M EK D++S G + E+
Sbjct: 185 PEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 128/287 (44%), Gaps = 39/287 (13%)
Query: 205 EDFDIRYCIGTGGYGSVYKAQLPN-----GKVFALKKLHTSEELAFIKSFKNEAQVLSQV 259
D ++ +G G +G V+ A+ N K+ K LA K F+ EA++L+ +
Sbjct: 15 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNL 74
Query: 260 LHRNIVKLYGYCLHKKCMFLIYEYMERGSL--FCNLHNNEDAV-----------ELDWAK 306
H +IVK YG C + +++EYM+ G L F H + + EL ++
Sbjct: 75 QHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQ 134
Query: 307 RVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNR- 365
++I +A + YL S +HRD+++ N L+ + L + DFG +R +++ R
Sbjct: 135 MLHIASQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRV 191
Query: 366 ---TLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDIXXXXXXXXDPK 421
T+L ++ PE T + DV+SFGV+ E+ GK P
Sbjct: 192 GGHTMLP--IRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQP--WFQLSNTEVIEC 247
Query: 422 IMLIDVLDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSV 468
I VL++ P V K + D++L C Q P+ R ++ +
Sbjct: 248 ITQGRVLER---PRVCPKEVYDVML------GCWQREPQQRLNIKEI 285
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 105/220 (47%), Gaps = 24/220 (10%)
Query: 201 IEATEDFDIRYCIGTGGYGSVYKAQL--PNGK-----VFALKKLHTSEELAFIKSFKNEA 253
IEA+ I IG+G G V +L P + + ALK +T + + F +EA
Sbjct: 46 IEASR-IHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQR---RDFLSEA 101
Query: 254 QVLSQVLHRNIVKLYGYCLHKKCMFLIYEYMERGSL--FCNLHNNEDAVELDWAKRVNIV 311
++ Q H NI++L G + ++ EYME GSL F H+ + + + V ++
Sbjct: 102 SIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTI----MQLVGML 157
Query: 312 KAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGT 371
+ + + YL +HRD+++ N+L++S L V+DFG +R+L D G
Sbjct: 158 RGVGAGMRYL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGG 214
Query: 372 ---YGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHP 407
+ APE + DV+SFGVV EVL G+ P
Sbjct: 215 KIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERP 254
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 102/211 (48%), Gaps = 8/211 (3%)
Query: 202 EATEDFDIRYCIGTGGYGSVYKAQ-LPNGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQ 258
E EDF + +G G + VY+A+ + G A+K + + ++ +NE ++ Q
Sbjct: 8 EKIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQ 67
Query: 259 VLHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHAL 318
+ H +I++LY Y ++L+ E G + L N + A+ + + + +
Sbjct: 68 LKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEAR--HFMHQIITGM 125
Query: 319 AYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPE 378
YLH S I+HRD++ +N+LL + +ADFG A L L GT YI+PE
Sbjct: 126 LYLH---SHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPE 182
Query: 379 LAYTMVMTEKCDVYSFGVVTLEVLMGKHPRD 409
+A + DV+S G + +L+G+ P D
Sbjct: 183 IATRSAHGLESDVWSLGCMFYTLLIGRPPFD 213
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 120/267 (44%), Gaps = 19/267 (7%)
Query: 213 IGTGGYGSVYKAQLPNGK-VFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYC 271
IG G +G VYK + K V A+K + E I+ + E VLSQ I + +G
Sbjct: 27 IGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYFGSY 86
Query: 272 LHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIH 331
L +++I EY+ GS L L+ I++ + L YLH S IH
Sbjct: 87 LKSTKLWIIMEYLGGGSALDLLKPGP----LEETYIATILREILKGLDYLH---SERKIH 139
Query: 332 RDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYTMVMTEKCDV 391
RDI + N+LL+ + + +ADFG A L R GT ++APE+ K D+
Sbjct: 140 RDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDFKADI 199
Query: 392 YSFGVVTLEVLMGKHPRDIXXXXXXXXDPKIMLIDVLDQRLPPPVDRKVIRDILLISTVS 451
+S G+ +E+ G+ P P +L ++ + PP ++ + +
Sbjct: 200 WSLGITAIELAKGEPPNS-------DLHPMRVLF-LIPKNSPPTLEGQHSKP---FKEFV 248
Query: 452 FACLQSNPKSRPTMQSVSQEFLITRKT 478
ACL +P+ RPT + + + ITR T
Sbjct: 249 EACLNKDPRFRPTAKELLKHKFITRYT 275
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 105/220 (47%), Gaps = 24/220 (10%)
Query: 201 IEATEDFDIRYCIGTGGYGSVYKAQL--PNGK-----VFALKKLHTSEELAFIKSFKNEA 253
IEA+ I IG+G G V +L P + + ALK +T + + F +EA
Sbjct: 46 IEASR-IHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQR---RDFLSEA 101
Query: 254 QVLSQVLHRNIVKLYGYCLHKKCMFLIYEYMERGSL--FCNLHNNEDAVELDWAKRVNIV 311
++ Q H NI++L G + ++ EYME GSL F H+ + + + V ++
Sbjct: 102 SIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTI----MQLVGML 157
Query: 312 KAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGT 371
+ + + YL +HRD+++ N+L++S L V+DFG +R+L D G
Sbjct: 158 RGVGAGMRYL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGG 214
Query: 372 ---YGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHP 407
+ APE + DV+SFGVV EVL G+ P
Sbjct: 215 KIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERP 254
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 128/283 (45%), Gaps = 46/283 (16%)
Query: 206 DFDIRYCIGTGGYGSVYKAQLPNGKV-FALKKLHTSEELAFIKSFKNEAQVLSQVLHRNI 264
D +++ +G G YG VY+ + A+K L E+ ++ F EA V+ ++ H N+
Sbjct: 12 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL--KEDTMEVEEFLKEAAVMKEIKHPNL 69
Query: 265 VKLYGYCLHKKCMFLIYEYMERGSLF-----CNLHNNEDAVELDWAKRVNIVKAMAHALA 319
V+L G C + ++I E+M G+L CN V L A ++ + A+
Sbjct: 70 VQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQI------SSAME 123
Query: 320 YLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGT---YGYIA 376
YL + IHRD+++ N L+ VADFG +RL+ D+ T AG + A
Sbjct: 124 YLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTX--TAHAGAKFPIKWTA 178
Query: 377 PE-LAYTMVMTEKCDVYSFGVVTLEVL---MGKHPRDIXXXXXXXXDP-KIMLIDVLDQR 431
PE LAY + K DV++FGV+ E+ M +P DP ++ + D R
Sbjct: 179 PESLAYNK-FSIKSDVWAFGVLLWEIATYGMSPYP---------GIDPSQVYELLEKDYR 228
Query: 432 L--PPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEF 472
+ P KV + AC Q NP RP+ + Q F
Sbjct: 229 MERPEGCPEKVYE-------LMRACWQWNPSDRPSFAEIHQAF 264
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 128/299 (42%), Gaps = 40/299 (13%)
Query: 206 DFDIRYCIGTGGYGSVYKAQLPN------GKVFALKKLHTSEELAFIKSFKNEAQVLSQV 259
D +++ +G G +G V+ A+ N + A+K L + E A + F+ EA++L+ +
Sbjct: 42 DIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESA-RQDFQREAELLTML 100
Query: 260 LHRNIVKLYGYCLHKKCMFLIYEYMERGSL--FCNLH--------NNEDAV--ELDWAKR 307
H++IV+ +G C + + +++EYM G L F H ED L +
Sbjct: 101 QHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQL 160
Query: 308 VNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADS----S 363
+ + +A + YL +HRD+++ N L+ L + DFG +R +++
Sbjct: 161 LAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVG 217
Query: 364 NRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDIXXXXXXXXDPKI 422
RT+L ++ PE T + DV+SFGVV E+ GK P D
Sbjct: 218 GRTML--PIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPW-YQLSNTEAIDCIT 274
Query: 423 MLIDVLDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTPLV 481
++ R PP ++R C Q P+ R +++ V + P V
Sbjct: 275 QGRELERPRACPPEVYAIMR----------GCWQREPQQRHSIKDVHARLQALAQAPPV 323
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 126/294 (42%), Gaps = 43/294 (14%)
Query: 197 YEDLIEATEDF---------DIRYCIGTGGYGSVY--KAQLPNGK--VFALKKLHTSEEL 243
YED A F I IG G +G V + +LP + A+K L
Sbjct: 26 YEDPNRAVHQFAKELDASCIKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTE 85
Query: 244 AFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEYMERGSL--FCNLHNNEDAVE 301
+ F EA ++ Q H N+V L G K + ++ E+ME G+L F H+ + V
Sbjct: 86 KQRRDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTV- 144
Query: 302 LDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHAD 361
+ V +++ +A + YL +HRD+++ NIL+NS L V+DFG +R++ D
Sbjct: 145 ---IQLVGMLRGIAAGMRYL---ADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDD 198
Query: 362 SSNRTLLAGT---YGYIAPELAYTMVMTEKCDVYSFGVVTLEVL-MGKHP-RDIXXXXXX 416
G + APE T DV+S+G+V EV+ G+ P D+
Sbjct: 199 PEAVYTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQD-- 256
Query: 417 XXDPKIMLIDVLDQ--RLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSV 468
+I +++ RLP P+D L++ C Q RP + +
Sbjct: 257 -------VIKAIEEGYRLPAPMDCPAGLHQLMLD-----CWQKERAERPKFEQI 298
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 98/213 (46%), Gaps = 16/213 (7%)
Query: 204 TEDFDIRYCIGTGGYGSVYKAQLPNGKV----FALKKLHTSEELAFIKSFKNEAQVLSQV 259
ED+D+ +G G YG V QL +V A+K + + ++ K E + +
Sbjct: 6 VEDWDLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKML 62
Query: 260 LHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALA 319
H N+VK YG+ +L EY G LF + + E D A+R + +
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQR--FFHQLMAGVV 119
Query: 320 YLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTL--LAGTYGYIAP 377
YLH I HRDI N+LL+ + ++DFG A + ++ R L + GT Y+AP
Sbjct: 120 YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAP 176
Query: 378 E-LAYTMVMTEKCDVYSFGVVTLEVLMGKHPRD 409
E L E DV+S G+V +L G+ P D
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 126/285 (44%), Gaps = 50/285 (17%)
Query: 206 DFDIRYCIGTGGYGSVYKAQLPNGKV-FALKKLHTSEELAFIKSFKNEAQVLSQVLHRNI 264
D +++ +G G YG VY+ + A+K L E+ ++ F EA V+ ++ H N+
Sbjct: 15 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL--KEDTMEVEEFLKEAAVMKEIKHPNL 72
Query: 265 VKLYGYCLHKKCMFLIYEYMERGSLF-----CNLHNNEDAVELDWAKRVNIVKAMAHALA 319
V+L G C + ++I E+M G+L CN V L A ++ + A+
Sbjct: 73 VQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQI------SSAME 126
Query: 320 YLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGT---YGYIA 376
YL + IHRD+++ N L+ VADFG +RL+ D+ T AG + A
Sbjct: 127 YLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTX--TAHAGAKFPIKWTA 181
Query: 377 PE-LAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDIXXXXXXXXDPKIMLIDVL-----D 429
PE LAY + K DV++FGV+ E+ G P P I L V D
Sbjct: 182 PESLAYNK-FSIKSDVWAFGVLLWEIATYGMSPY-----------PGIDLSQVYELLEKD 229
Query: 430 QRL--PPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEF 472
R+ P KV + AC Q NP RP+ + Q F
Sbjct: 230 YRMERPEGCPEKVYE-------LMRACWQWNPSDRPSFAEIHQAF 267
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 128/299 (42%), Gaps = 40/299 (13%)
Query: 206 DFDIRYCIGTGGYGSVYKAQLPN------GKVFALKKLHTSEELAFIKSFKNEAQVLSQV 259
D +++ +G G +G V+ A+ N + A+K L + E A + F+ EA++L+ +
Sbjct: 13 DIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESA-RQDFQREAELLTML 71
Query: 260 LHRNIVKLYGYCLHKKCMFLIYEYMERGSL--FCNLH--------NNEDAV--ELDWAKR 307
H++IV+ +G C + + +++EYM G L F H ED L +
Sbjct: 72 QHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQL 131
Query: 308 VNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADS----S 363
+ + +A + YL +HRD+++ N L+ L + DFG +R +++
Sbjct: 132 LAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVG 188
Query: 364 NRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDIXXXXXXXXDPKI 422
RT+L ++ PE T + DV+SFGVV E+ GK P D
Sbjct: 189 GRTML--PIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPW-YQLSNTEAIDCIT 245
Query: 423 MLIDVLDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTPLV 481
++ R PP ++R C Q P+ R +++ V + P V
Sbjct: 246 QGRELERPRACPPEVYAIMR----------GCWQREPQQRHSIKDVHARLQALAQAPPV 294
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 98/213 (46%), Gaps = 16/213 (7%)
Query: 204 TEDFDIRYCIGTGGYGSVYKAQLPNGKV----FALKKLHTSEELAFIKSFKNEAQVLSQV 259
ED+D+ +G G YG V QL +V A+K + + ++ K E + +
Sbjct: 5 VEDWDLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKML 61
Query: 260 LHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALA 319
H N+VK YG+ +L EY G LF + + E D A+R + +
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQR--FFHQLMAGVV 118
Query: 320 YLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTL--LAGTYGYIAP 377
YLH I HRDI N+LL+ + ++DFG A + ++ R L + GT Y+AP
Sbjct: 119 YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAP 175
Query: 378 E-LAYTMVMTEKCDVYSFGVVTLEVLMGKHPRD 409
E L E DV+S G+V +L G+ P D
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 98/213 (46%), Gaps = 16/213 (7%)
Query: 204 TEDFDIRYCIGTGGYGSVYKAQLPNGKV----FALKKLHTSEELAFIKSFKNEAQVLSQV 259
ED+D+ +G G YG V QL +V A+K + + ++ K E + +
Sbjct: 5 VEDWDLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKML 61
Query: 260 LHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALA 319
H N+VK YG+ +L EY G LF + + E D A+R + +
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQR--FFHQLMAGVV 118
Query: 320 YLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTL--LAGTYGYIAP 377
YLH I HRDI N+LL+ + ++DFG A + ++ R L + GT Y+AP
Sbjct: 119 YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 378 E-LAYTMVMTEKCDVYSFGVVTLEVLMGKHPRD 409
E L E DV+S G+V +L G+ P D
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 126/285 (44%), Gaps = 50/285 (17%)
Query: 206 DFDIRYCIGTGGYGSVYKAQLPNGKV-FALKKLHTSEELAFIKSFKNEAQVLSQVLHRNI 264
D +++ +G G YG VY+ + A+K L E+ ++ F EA V+ ++ H N+
Sbjct: 19 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL--KEDTMEVEEFLKEAAVMKEIKHPNL 76
Query: 265 VKLYGYCLHKKCMFLIYEYMERGSLF-----CNLHNNEDAVELDWAKRVNIVKAMAHALA 319
V+L G C + ++I E+M G+L CN V L A ++ + A+
Sbjct: 77 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQI------SSAME 130
Query: 320 YLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGT---YGYIA 376
YL + IHRD+++ N L+ VADFG +RL+ D+ T AG + A
Sbjct: 131 YLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTX--TAHAGAKFPIKWTA 185
Query: 377 PE-LAYTMVMTEKCDVYSFGVVTLEV-LMGKHPRDIXXXXXXXXDPKIMLIDVL-----D 429
PE LAY + K DV++FGV+ E+ G P P I L V D
Sbjct: 186 PESLAYNK-FSIKSDVWAFGVLLWEIATYGMSPY-----------PGIDLSQVYELLEKD 233
Query: 430 QRL--PPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEF 472
R+ P KV + AC Q NP RP+ + Q F
Sbjct: 234 YRMERPEGCPEKVYE-------LMRACWQWNPSDRPSFAEIHQAF 271
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 128/299 (42%), Gaps = 40/299 (13%)
Query: 206 DFDIRYCIGTGGYGSVYKAQLPN------GKVFALKKLHTSEELAFIKSFKNEAQVLSQV 259
D +++ +G G +G V+ A+ N + A+K L + E A + F+ EA++L+ +
Sbjct: 19 DIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESA-RQDFQREAELLTML 77
Query: 260 LHRNIVKLYGYCLHKKCMFLIYEYMERGSL--FCNLH--------NNEDAV--ELDWAKR 307
H++IV+ +G C + + +++EYM G L F H ED L +
Sbjct: 78 QHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQL 137
Query: 308 VNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADS----S 363
+ + +A + YL +HRD+++ N L+ L + DFG +R +++
Sbjct: 138 LAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVG 194
Query: 364 NRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDIXXXXXXXXDPKI 422
RT+L ++ PE T + DV+SFGVV E+ GK P D
Sbjct: 195 GRTML--PIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPW-YQLSNTEAIDCIT 251
Query: 423 MLIDVLDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTPLV 481
++ R PP ++R C Q P+ R +++ V + P V
Sbjct: 252 QGRELERPRACPPEVYAIMR----------GCWQREPQQRHSIKDVHARLQALAQAPPV 300
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 126/285 (44%), Gaps = 50/285 (17%)
Query: 206 DFDIRYCIGTGGYGSVYKAQLPNGKV-FALKKLHTSEELAFIKSFKNEAQVLSQVLHRNI 264
D +++ +G G YG VY+ + A+K L E+ ++ F EA V+ ++ H N+
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL--KEDTMEVEEFLKEAAVMKEIKHPNL 71
Query: 265 VKLYGYCLHKKCMFLIYEYMERGSLF-----CNLHNNEDAVELDWAKRVNIVKAMAHALA 319
V+L G C + ++I E+M G+L CN V L A ++ + A+
Sbjct: 72 VQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQI------SSAME 125
Query: 320 YLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGT---YGYIA 376
YL + IHRD+++ N L+ VADFG +RL+ D+ T AG + A
Sbjct: 126 YLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY--TAHAGAKFPIKWTA 180
Query: 377 PE-LAYTMVMTEKCDVYSFGVVTLEV-LMGKHPRDIXXXXXXXXDPKIMLIDVL-----D 429
PE LAY + K DV++FGV+ E+ G P P I L V D
Sbjct: 181 PESLAYNK-FSIKSDVWAFGVLLWEIATYGMSPY-----------PGIDLSQVYELLEKD 228
Query: 430 QRL--PPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEF 472
R+ P KV + AC Q NP RP+ + Q F
Sbjct: 229 YRMERPEGCPEKVYE-------LMRACWQWNPSDRPSFAEIHQAF 266
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 126/285 (44%), Gaps = 50/285 (17%)
Query: 206 DFDIRYCIGTGGYGSVYKAQLPNGKV-FALKKLHTSEELAFIKSFKNEAQVLSQVLHRNI 264
D +++ +G G YG VY+ + A+K L E+ ++ F EA V+ ++ H N+
Sbjct: 19 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL--KEDTMEVEEFLKEAAVMKEIKHPNL 76
Query: 265 VKLYGYCLHKKCMFLIYEYMERGSLF-----CNLHNNEDAVELDWAKRVNIVKAMAHALA 319
V+L G C + ++I E+M G+L CN V L A ++ + A+
Sbjct: 77 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQI------SSAME 130
Query: 320 YLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGT---YGYIA 376
YL + IHRD+++ N L+ VADFG +RL+ D+ T AG + A
Sbjct: 131 YLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTA 185
Query: 377 PE-LAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDIXXXXXXXXDPKIMLIDVL-----D 429
PE LAY + K DV++FGV+ E+ G P P I L V D
Sbjct: 186 PESLAYNK-FSIKSDVWAFGVLLWEIATYGMSPY-----------PGIDLSQVYELLEKD 233
Query: 430 QRL--PPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEF 472
R+ P KV + AC Q NP RP+ + Q F
Sbjct: 234 YRMERPEGCPEKVYE-------LMRACWQWNPSDRPSFAEIHQAF 271
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 128/283 (45%), Gaps = 46/283 (16%)
Query: 206 DFDIRYCIGTGGYGSVYKAQLPNGKV-FALKKLHTSEELAFIKSFKNEAQVLSQVLHRNI 264
D +++ +G G YG VY+ + A+K L E+ ++ F EA V+ ++ H N+
Sbjct: 12 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL--KEDTMEVEEFLKEAAVMKEIKHPNL 69
Query: 265 VKLYGYCLHKKCMFLIYEYMERGSLF-----CNLHNNEDAVELDWAKRVNIVKAMAHALA 319
V+L G C + ++I E+M G+L CN V L A ++ + A+
Sbjct: 70 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQI------SSAME 123
Query: 320 YLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGT---YGYIA 376
YL + IHRD+++ N L+ VADFG +RL+ D+ T AG + A
Sbjct: 124 YLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTF--TAHAGAKFPIKWTA 178
Query: 377 PE-LAYTMVMTEKCDVYSFGVVTLEVL---MGKHPRDIXXXXXXXXDP-KIMLIDVLDQR 431
PE LAY + K DV++FGV+ E+ M +P DP ++ + D R
Sbjct: 179 PESLAYNK-FSIKSDVWAFGVLLWEIATYGMSPYP---------GIDPSQVYELLEKDYR 228
Query: 432 L--PPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEF 472
+ P KV + AC Q NP RP+ + Q F
Sbjct: 229 MERPEGCPEKVYE-------LMRACWQWNPSDRPSFAEIHQAF 264
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 126/285 (44%), Gaps = 50/285 (17%)
Query: 206 DFDIRYCIGTGGYGSVYKAQLPNGKV-FALKKLHTSEELAFIKSFKNEAQVLSQVLHRNI 264
D +++ +G G YG VY+ + A+K L E+ ++ F EA V+ ++ H N+
Sbjct: 19 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL--KEDTMEVEEFLKEAAVMKEIKHPNL 76
Query: 265 VKLYGYCLHKKCMFLIYEYMERGSLF-----CNLHNNEDAVELDWAKRVNIVKAMAHALA 319
V+L G C + ++I E+M G+L CN V L A ++ + A+
Sbjct: 77 VQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQI------SSAME 130
Query: 320 YLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGT---YGYIA 376
YL + IHRD+++ N L+ VADFG +RL+ D+ T AG + A
Sbjct: 131 YLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY--TAHAGAKFPIKWTA 185
Query: 377 PE-LAYTMVMTEKCDVYSFGVVTLEV-LMGKHPRDIXXXXXXXXDPKIMLIDVL-----D 429
PE LAY + K DV++FGV+ E+ G P P I L V D
Sbjct: 186 PESLAYNK-FSIKSDVWAFGVLLWEIATYGMSPY-----------PGIDLSQVYELLEKD 233
Query: 430 QRL--PPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEF 472
R+ P KV + AC Q NP RP+ + Q F
Sbjct: 234 YRMERPEGCPEKVYE-------LMRACWQWNPSDRPSFAEIHQAF 271
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 108/217 (49%), Gaps = 29/217 (13%)
Query: 213 IGTGGYGSVYKAQLPN-----GKVF-ALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVK 266
+G G +G V+ A+ N K+ A+K L + + A K F EA++L+ + H +IVK
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNAR-KDFHREAELLTNLQHEHIVK 79
Query: 267 LYGYCLHKKCMFLIYEYMERGSL--FCNLHNNEDAV---------ELDWAKRVNIVKAMA 315
YG C+ + +++EYM+ G L F H DAV EL ++ ++I + +A
Sbjct: 80 FYGVCVEGDPLIMVFEYMKHGDLNKFLRAH-GPDAVLMAEGNPPTELTQSQMLHIAQQIA 138
Query: 316 HALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNR----TLLAGT 371
+ YL S +HRD+++ N L+ L + DFG +R +++ R T+L
Sbjct: 139 AGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLP-- 193
Query: 372 YGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHP 407
++ PE T + DV+S GVV E+ GK P
Sbjct: 194 IRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQP 230
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 126/285 (44%), Gaps = 50/285 (17%)
Query: 206 DFDIRYCIGTGGYGSVYKAQLPNGKV-FALKKLHTSEELAFIKSFKNEAQVLSQVLHRNI 264
D +++ +G G YG VY+ + A+K L E+ ++ F EA V+ ++ H N+
Sbjct: 16 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL--KEDTMEVEEFLKEAAVMKEIKHPNL 73
Query: 265 VKLYGYCLHKKCMFLIYEYMERGSLF-----CNLHNNEDAVELDWAKRVNIVKAMAHALA 319
V+L G C + ++I E+M G+L CN V L A ++ + A+
Sbjct: 74 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQI------SSAME 127
Query: 320 YLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGT---YGYIA 376
YL + IHRD+++ N L+ VADFG +RL+ D+ T AG + A
Sbjct: 128 YLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY--TAHAGAKFPIKWTA 182
Query: 377 PE-LAYTMVMTEKCDVYSFGVVTLEV-LMGKHPRDIXXXXXXXXDPKIMLIDVL-----D 429
PE LAY + K DV++FGV+ E+ G P P I L V D
Sbjct: 183 PESLAYNK-FSIKSDVWAFGVLLWEIATYGMSPY-----------PGIDLSQVYELLEKD 230
Query: 430 QRL--PPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEF 472
R+ P KV + AC Q NP RP+ + Q F
Sbjct: 231 YRMERPEGCPEKVYE-------LMRACWQWNPSDRPSFAEIHQAF 268
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 126/285 (44%), Gaps = 50/285 (17%)
Query: 206 DFDIRYCIGTGGYGSVYKAQLPNGKV-FALKKLHTSEELAFIKSFKNEAQVLSQVLHRNI 264
D +++ +G G YG VY+ + A+K L E+ ++ F EA V+ ++ H N+
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL--KEDTMEVEEFLKEAAVMKEIKHPNL 71
Query: 265 VKLYGYCLHKKCMFLIYEYMERGSLF-----CNLHNNEDAVELDWAKRVNIVKAMAHALA 319
V+L G C + ++I E+M G+L CN V L A ++ + A+
Sbjct: 72 VQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQI------SSAME 125
Query: 320 YLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGT---YGYIA 376
YL + IHRD+++ N L+ VADFG +RL+ D+ T AG + A
Sbjct: 126 YLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTA 180
Query: 377 PE-LAYTMVMTEKCDVYSFGVVTLEV-LMGKHPRDIXXXXXXXXDPKIMLIDVL-----D 429
PE LAY + K DV++FGV+ E+ G P P I L V D
Sbjct: 181 PESLAYNK-FSIKSDVWAFGVLLWEIATYGMSPY-----------PGIDLSQVYELLEKD 228
Query: 430 QRL--PPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEF 472
R+ P KV + AC Q NP RP+ + Q F
Sbjct: 229 YRMERPEGCPEKVYE-------LMRACWQWNPSDRPSFAEIHQAF 266
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 126/285 (44%), Gaps = 50/285 (17%)
Query: 206 DFDIRYCIGTGGYGSVYKAQLPNGKV-FALKKLHTSEELAFIKSFKNEAQVLSQVLHRNI 264
D +++ +G G YG VY+ + A+K L E+ ++ F EA V+ ++ H N+
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL--KEDTMEVEEFLKEAAVMKEIKHPNL 71
Query: 265 VKLYGYCLHKKCMFLIYEYMERGSLF-----CNLHNNEDAVELDWAKRVNIVKAMAHALA 319
V+L G C + ++I E+M G+L CN V L A ++ + A+
Sbjct: 72 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQI------SSAME 125
Query: 320 YLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGT---YGYIA 376
YL + IHRD+++ N L+ VADFG +RL+ D+ T AG + A
Sbjct: 126 YLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTA 180
Query: 377 PE-LAYTMVMTEKCDVYSFGVVTLEV-LMGKHPRDIXXXXXXXXDPKIMLIDVL-----D 429
PE LAY + K DV++FGV+ E+ G P P I L V D
Sbjct: 181 PESLAYNK-FSIKSDVWAFGVLLWEIATYGMSPY-----------PGIDLSQVYELLEKD 228
Query: 430 QRL--PPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEF 472
R+ P KV + AC Q NP RP+ + Q F
Sbjct: 229 YRMERPEGCPEKVYE-------LMRACWQWNPSDRPSFAEIHQAF 266
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 126/285 (44%), Gaps = 50/285 (17%)
Query: 206 DFDIRYCIGTGGYGSVYKAQLPNGKV-FALKKLHTSEELAFIKSFKNEAQVLSQVLHRNI 264
D +++ +G G YG VY+ + A+K L E+ ++ F EA V+ ++ H N+
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL--KEDTMEVEEFLKEAAVMKEIKHPNL 71
Query: 265 VKLYGYCLHKKCMFLIYEYMERGSLF-----CNLHNNEDAVELDWAKRVNIVKAMAHALA 319
V+L G C + ++I E+M G+L CN V L A ++ + A+
Sbjct: 72 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQI------SSAME 125
Query: 320 YLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGT---YGYIA 376
YL + IHRD+++ N L+ VADFG +RL+ D+ T AG + A
Sbjct: 126 YLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY--TAHAGAKFPIKWTA 180
Query: 377 PE-LAYTMVMTEKCDVYSFGVVTLEV-LMGKHPRDIXXXXXXXXDPKIMLIDVL-----D 429
PE LAY + K DV++FGV+ E+ G P P I L V D
Sbjct: 181 PESLAYNK-FSIKSDVWAFGVLLWEIATYGMSPY-----------PGIDLSQVYELLEKD 228
Query: 430 QRL--PPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEF 472
R+ P KV + AC Q NP RP+ + Q F
Sbjct: 229 YRMERPEGCPEKVYE-------LMRACWQWNPSDRPSFAEIHQAF 266
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 126/285 (44%), Gaps = 50/285 (17%)
Query: 206 DFDIRYCIGTGGYGSVYKAQLPNGKV-FALKKLHTSEELAFIKSFKNEAQVLSQVLHRNI 264
D +++ +G G YG VY+ + A+K L E+ ++ F EA V+ ++ H N+
Sbjct: 19 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL--KEDTMEVEEFLKEAAVMKEIKHPNL 76
Query: 265 VKLYGYCLHKKCMFLIYEYMERGSLF-----CNLHNNEDAVELDWAKRVNIVKAMAHALA 319
V+L G C + ++I E+M G+L CN V L A ++ + A+
Sbjct: 77 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQI------SSAME 130
Query: 320 YLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGT---YGYIA 376
YL + IHRD+++ N L+ VADFG +RL+ D+ T AG + A
Sbjct: 131 YLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTA 185
Query: 377 PE-LAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDIXXXXXXXXDPKIMLIDVL-----D 429
PE LAY + K DV++FGV+ E+ G P P I L V D
Sbjct: 186 PESLAYNK-FSIKSDVWAFGVLLWEIATYGMSPY-----------PGIDLSQVYELLEKD 233
Query: 430 QRL--PPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEF 472
R+ P KV + AC Q NP RP+ + Q F
Sbjct: 234 YRMERPEGCPEKVYE-------LMRACWQWNPSDRPSFAEIHQAF 271
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 126/285 (44%), Gaps = 50/285 (17%)
Query: 206 DFDIRYCIGTGGYGSVYKAQLPNGKV-FALKKLHTSEELAFIKSFKNEAQVLSQVLHRNI 264
D +++ +G G YG VY+ + A+K L E+ ++ F EA V+ ++ H N+
Sbjct: 19 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL--KEDTMEVEEFLKEAAVMKEIKHPNL 76
Query: 265 VKLYGYCLHKKCMFLIYEYMERGSLF-----CNLHNNEDAVELDWAKRVNIVKAMAHALA 319
V+L G C + ++I E+M G+L CN V L A ++ + A+
Sbjct: 77 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQI------SSAME 130
Query: 320 YLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGT---YGYIA 376
YL + IHRD+++ N L+ VADFG +RL+ D+ T AG + A
Sbjct: 131 YLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY--TAHAGAKFPIKWTA 185
Query: 377 PE-LAYTMVMTEKCDVYSFGVVTLEV-LMGKHPRDIXXXXXXXXDPKIMLIDVL-----D 429
PE LAY + K DV++FGV+ E+ G P P I L V D
Sbjct: 186 PESLAYNK-FSIKSDVWAFGVLLWEIATYGMSPY-----------PGIDLSQVYELLEKD 233
Query: 430 QRL--PPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEF 472
R+ P KV + AC Q NP RP+ + Q F
Sbjct: 234 YRMERPEGCPEKVYE-------LMRACWQWNPSDRPSFAEIHQAF 271
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 126/285 (44%), Gaps = 50/285 (17%)
Query: 206 DFDIRYCIGTGGYGSVYKAQLPNGKV-FALKKLHTSEELAFIKSFKNEAQVLSQVLHRNI 264
D +++ +G G YG VY+ + A+K L E+ ++ F EA V+ ++ H N+
Sbjct: 15 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL--KEDTMEVEEFLKEAAVMKEIKHPNL 72
Query: 265 VKLYGYCLHKKCMFLIYEYMERGSLF-----CNLHNNEDAVELDWAKRVNIVKAMAHALA 319
V+L G C + ++I E+M G+L CN V L A ++ + A+
Sbjct: 73 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQI------SSAME 126
Query: 320 YLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGT---YGYIA 376
YL + IHRD+++ N L+ VADFG +RL+ D+ T AG + A
Sbjct: 127 YLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY--TAPAGAKFPIKWTA 181
Query: 377 PE-LAYTMVMTEKCDVYSFGVVTLEV-LMGKHPRDIXXXXXXXXDPKIMLIDVL-----D 429
PE LAY + K DV++FGV+ E+ G P P I L V D
Sbjct: 182 PESLAYNK-FSIKSDVWAFGVLLWEIATYGMSPY-----------PGIDLSQVYELLEKD 229
Query: 430 QRL--PPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEF 472
R+ P KV + AC Q NP RP+ + Q F
Sbjct: 230 YRMERPEGCPEKVYE-------LMRACWQWNPSDRPSFAEIHQAF 267
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 126/285 (44%), Gaps = 50/285 (17%)
Query: 206 DFDIRYCIGTGGYGSVYKAQLPNGKV-FALKKLHTSEELAFIKSFKNEAQVLSQVLHRNI 264
D +++ +G G YG VY+ + A+K L E+ ++ F EA V+ ++ H N+
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL--KEDTMEVEEFLKEAAVMKEIKHPNL 71
Query: 265 VKLYGYCLHKKCMFLIYEYMERGSLF-----CNLHNNEDAVELDWAKRVNIVKAMAHALA 319
V+L G C + ++I E+M G+L CN V L A ++ + A+
Sbjct: 72 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQI------SSAME 125
Query: 320 YLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGT---YGYIA 376
YL + IHRD+++ N L+ VADFG +RL+ D+ T AG + A
Sbjct: 126 YLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY--TAHAGAKFPIKWTA 180
Query: 377 PE-LAYTMVMTEKCDVYSFGVVTLEV-LMGKHPRDIXXXXXXXXDPKIMLIDVL-----D 429
PE LAY + K DV++FGV+ E+ G P P I L V D
Sbjct: 181 PESLAYNK-FSIKSDVWAFGVLLWEIATYGMSPY-----------PGIDLSQVYELLEKD 228
Query: 430 QRL--PPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEF 472
R+ P KV + AC Q NP RP+ + Q F
Sbjct: 229 YRMERPEGCPEKVYE-------LMRACWQWNPSDRPSFAEIHQAF 266
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 126/285 (44%), Gaps = 50/285 (17%)
Query: 206 DFDIRYCIGTGGYGSVYKAQLPNGKV-FALKKLHTSEELAFIKSFKNEAQVLSQVLHRNI 264
D +++ +G G YG VY+ + A+K L E+ ++ F EA V+ ++ H N+
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL--KEDTMEVEEFLKEAAVMKEIKHPNL 71
Query: 265 VKLYGYCLHKKCMFLIYEYMERGSLF-----CNLHNNEDAVELDWAKRVNIVKAMAHALA 319
V+L G C + ++I E+M G+L CN V L A ++ + A+
Sbjct: 72 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQI------SSAME 125
Query: 320 YLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGT---YGYIA 376
YL + IHRD+++ N L+ VADFG +RL+ D+ T AG + A
Sbjct: 126 YLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY--TAHAGAKFPIKWTA 180
Query: 377 PE-LAYTMVMTEKCDVYSFGVVTLEV-LMGKHPRDIXXXXXXXXDPKIMLIDVL-----D 429
PE LAY + K DV++FGV+ E+ G P P I L V D
Sbjct: 181 PESLAYNK-FSIKSDVWAFGVLLWEIATYGMSPY-----------PGIDLSQVYELLEKD 228
Query: 430 QRL--PPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEF 472
R+ P KV + AC Q NP RP+ + Q F
Sbjct: 229 YRMERPEGCPEKVYE-------LMRACWQWNPSDRPSFAEIHQAF 266
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 126/285 (44%), Gaps = 50/285 (17%)
Query: 206 DFDIRYCIGTGGYGSVYKAQLPNGKV-FALKKLHTSEELAFIKSFKNEAQVLSQVLHRNI 264
D +++ +G G YG VY+ + A+K L E+ ++ F EA V+ ++ H N+
Sbjct: 18 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL--KEDTMEVEEFLKEAAVMKEIKHPNL 75
Query: 265 VKLYGYCLHKKCMFLIYEYMERGSLF-----CNLHNNEDAVELDWAKRVNIVKAMAHALA 319
V+L G C + ++I E+M G+L CN V L A ++ + A+
Sbjct: 76 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQI------SSAME 129
Query: 320 YLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGT---YGYIA 376
YL + IHRD+++ N L+ VADFG +RL+ D+ T AG + A
Sbjct: 130 YLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY--TAHAGAKFPIKWTA 184
Query: 377 PE-LAYTMVMTEKCDVYSFGVVTLEV-LMGKHPRDIXXXXXXXXDPKIMLIDVL-----D 429
PE LAY + K DV++FGV+ E+ G P P I L V D
Sbjct: 185 PESLAYNK-FSIKSDVWAFGVLLWEIATYGMSPY-----------PGIDLSQVYELLEKD 232
Query: 430 QRL--PPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEF 472
R+ P KV + AC Q NP RP+ + Q F
Sbjct: 233 YRMERPEGCPEKVYE-------LMRACWQWNPSDRPSFAEIHQAF 270
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 126/285 (44%), Gaps = 50/285 (17%)
Query: 206 DFDIRYCIGTGGYGSVYKAQLPNGKV-FALKKLHTSEELAFIKSFKNEAQVLSQVLHRNI 264
D +++ +G G YG VY+ + A+K L E+ ++ F EA V+ ++ H N+
Sbjct: 16 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL--KEDTMEVEEFLKEAAVMKEIKHPNL 73
Query: 265 VKLYGYCLHKKCMFLIYEYMERGSLF-----CNLHNNEDAVELDWAKRVNIVKAMAHALA 319
V+L G C + ++I E+M G+L CN V L A ++ + A+
Sbjct: 74 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQI------SSAME 127
Query: 320 YLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGT---YGYIA 376
YL + IHRD+++ N L+ VADFG +RL+ D+ T AG + A
Sbjct: 128 YLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY--TAHAGAKFPIKWTA 182
Query: 377 PE-LAYTMVMTEKCDVYSFGVVTLEV-LMGKHPRDIXXXXXXXXDPKIMLIDVL-----D 429
PE LAY + K DV++FGV+ E+ G P P I L V D
Sbjct: 183 PESLAYNK-FSIKSDVWAFGVLLWEIATYGMSPY-----------PGIDLSQVYELLEKD 230
Query: 430 QRL--PPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEF 472
R+ P KV + AC Q NP RP+ + Q F
Sbjct: 231 YRMERPEGCPEKVYE-------LMRACWQWNPSDRPSFAEIHQAF 268
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 126/285 (44%), Gaps = 50/285 (17%)
Query: 206 DFDIRYCIGTGGYGSVYKAQLPNGKV-FALKKLHTSEELAFIKSFKNEAQVLSQVLHRNI 264
D +++ +G G YG VY+ + A+K L E+ ++ F EA V+ ++ H N+
Sbjct: 16 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL--KEDTMEVEEFLKEAAVMKEIKHPNL 73
Query: 265 VKLYGYCLHKKCMFLIYEYMERGSLF-----CNLHNNEDAVELDWAKRVNIVKAMAHALA 319
V+L G C + ++I E+M G+L CN V L A ++ + A+
Sbjct: 74 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQI------SSAME 127
Query: 320 YLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGT---YGYIA 376
YL + IHRD+++ N L+ VADFG +RL+ D+ T AG + A
Sbjct: 128 YLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY--TAPAGAKFPIKWTA 182
Query: 377 PE-LAYTMVMTEKCDVYSFGVVTLEV-LMGKHPRDIXXXXXXXXDPKIMLIDVL-----D 429
PE LAY + K DV++FGV+ E+ G P P I L V D
Sbjct: 183 PESLAYNK-FSIKSDVWAFGVLLWEIATYGMSPY-----------PGIDLSQVYELLEKD 230
Query: 430 QRL--PPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEF 472
R+ P KV + AC Q NP RP+ + Q F
Sbjct: 231 YRMERPEGCPEKVYE-------LMRACWQWNPSDRPSFAEIHQAF 268
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 99/213 (46%), Gaps = 16/213 (7%)
Query: 204 TEDFDIRYCIGTGGYGSVYKAQLPNGKV----FALKKLHTSEELAFIKSFKNEAQVLSQV 259
ED+D+ +G G YG V QL +V A+K + + ++ K E + + +
Sbjct: 6 VEDWDLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAML 62
Query: 260 LHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALA 319
H N+VK YG+ +L EY G LF + + E D A+R + +
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQR--FFHQLMAGVV 119
Query: 320 YLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTL--LAGTYGYIAP 377
YLH I HRDI N+LL+ + ++DFG A + ++ R L + GT Y+AP
Sbjct: 120 YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 378 E-LAYTMVMTEKCDVYSFGVVTLEVLMGKHPRD 409
E L E DV+S G+V +L G+ P D
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 126/285 (44%), Gaps = 50/285 (17%)
Query: 206 DFDIRYCIGTGGYGSVYKAQLPNGKV-FALKKLHTSEELAFIKSFKNEAQVLSQVLHRNI 264
D +++ +G G YG VY+ + A+K L E+ ++ F EA V+ ++ H N+
Sbjct: 27 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL--KEDTMEVEEFLKEAAVMKEIKHPNL 84
Query: 265 VKLYGYCLHKKCMFLIYEYMERGSLF-----CNLHNNEDAVELDWAKRVNIVKAMAHALA 319
V+L G C + ++I E+M G+L CN V L A ++ + A+
Sbjct: 85 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQI------SSAME 138
Query: 320 YLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGT---YGYIA 376
YL + IHRD+++ N L+ VADFG +RL+ D+ T AG + A
Sbjct: 139 YLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY--TAHAGAKFPIKWTA 193
Query: 377 PE-LAYTMVMTEKCDVYSFGVVTLEV-LMGKHPRDIXXXXXXXXDPKIMLIDVL-----D 429
PE LAY + K DV++FGV+ E+ G P P I L V D
Sbjct: 194 PESLAYNK-FSIKSDVWAFGVLLWEIATYGMSPY-----------PGIDLSQVYELLEKD 241
Query: 430 QRL--PPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEF 472
R+ P KV + AC Q NP RP+ + Q F
Sbjct: 242 YRMERPEGCPEKVYE-------LMRACWQWNPSDRPSFAEIHQAF 279
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 99/197 (50%), Gaps = 8/197 (4%)
Query: 213 IGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCL 272
+G G +G V+ N A+K L +++F EA ++ + H +V+LY
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLKPG--TMSVQAFLEEANLMKTLQHDKLVRLYAVVT 78
Query: 273 HKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHR 332
++ +++I EYM +GSL L ++E L K ++ +A +AY+ + IHR
Sbjct: 79 REEPIYIITEYMAKGSLLDFLKSDEGGKVL-LPKLIDFSAQIAEGMAYIERK---NYIHR 134
Query: 333 DISSNNILLNSKLEAFVADFGTARLLHADS-SNRTLLAGTYGYIAPELAYTMVMTEKCDV 391
D+ + N+L++ L +ADFG AR++ + + R + APE T K DV
Sbjct: 135 DLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSDV 194
Query: 392 YSFGVVTLEVLM-GKHP 407
+SFG++ E++ GK P
Sbjct: 195 WSFGILLYEIVTYGKIP 211
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 98/213 (46%), Gaps = 16/213 (7%)
Query: 204 TEDFDIRYCIGTGGYGSVYKAQLPNGKV----FALKKLHTSEELAFIKSFKNEAQVLSQV 259
ED+D+ +G G YG V QL +V A+K + + ++ K E + +
Sbjct: 5 VEDWDLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 61
Query: 260 LHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALA 319
H N+VK YG+ +L EY G LF + + E D A+R + +
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQR--FFHQLMAGVV 118
Query: 320 YLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTL--LAGTYGYIAP 377
YLH I HRDI N+LL+ + ++DFG A + ++ R L + GT Y+AP
Sbjct: 119 YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 378 E-LAYTMVMTEKCDVYSFGVVTLEVLMGKHPRD 409
E L E DV+S G+V +L G+ P D
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 98/213 (46%), Gaps = 16/213 (7%)
Query: 204 TEDFDIRYCIGTGGYGSVYKAQLPNGKV----FALKKLHTSEELAFIKSFKNEAQVLSQV 259
ED+D+ +G G YG V QL +V A+K + + ++ K E + +
Sbjct: 6 VEDWDLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 62
Query: 260 LHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALA 319
H N+VK YG+ +L EY G LF + + E D A+R + +
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQR--FFHQLMAGVV 119
Query: 320 YLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTL--LAGTYGYIAP 377
YLH I HRDI N+LL+ + ++DFG A + ++ R L + GT Y+AP
Sbjct: 120 YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 378 E-LAYTMVMTEKCDVYSFGVVTLEVLMGKHPRD 409
E L E DV+S G+V +L G+ P D
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 98/213 (46%), Gaps = 16/213 (7%)
Query: 204 TEDFDIRYCIGTGGYGSVYKAQLPNGKV----FALKKLHTSEELAFIKSFKNEAQVLSQV 259
ED+D+ +G G YG V QL +V A+K + + ++ K E + +
Sbjct: 6 VEDWDLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 62
Query: 260 LHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALA 319
H N+VK YG+ +L EY G LF + + E D A+R + +
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQR--FFHQLMAGVV 119
Query: 320 YLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTL--LAGTYGYIAP 377
YLH I HRDI N+LL+ + ++DFG A + ++ R L + GT Y+AP
Sbjct: 120 YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 378 E-LAYTMVMTEKCDVYSFGVVTLEVLMGKHPRD 409
E L E DV+S G+V +L G+ P D
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 98/213 (46%), Gaps = 16/213 (7%)
Query: 204 TEDFDIRYCIGTGGYGSVYKAQLPNGKV----FALKKLHTSEELAFIKSFKNEAQVLSQV 259
ED+D+ +G G YG V QL +V A+K + + ++ K E + +
Sbjct: 6 VEDWDLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 62
Query: 260 LHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALA 319
H N+VK YG+ +L EY G LF + + E D A+R + +
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQR--FFHQLMAGVV 119
Query: 320 YLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTL--LAGTYGYIAP 377
YLH I HRDI N+LL+ + ++DFG A + ++ R L + GT Y+AP
Sbjct: 120 YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 378 E-LAYTMVMTEKCDVYSFGVVTLEVLMGKHPRD 409
E L E DV+S G+V +L G+ P D
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 98/213 (46%), Gaps = 16/213 (7%)
Query: 204 TEDFDIRYCIGTGGYGSVYKAQLPNGKV----FALKKLHTSEELAFIKSFKNEAQVLSQV 259
ED+D+ +G G YG V QL +V A+K + + ++ K E + +
Sbjct: 6 VEDWDLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 62
Query: 260 LHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALA 319
H N+VK YG+ +L EY G LF + + E D A+R + +
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQR--FFHQLMAGVV 119
Query: 320 YLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTL--LAGTYGYIAP 377
YLH I HRDI N+LL+ + ++DFG A + ++ R L + GT Y+AP
Sbjct: 120 YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 378 E-LAYTMVMTEKCDVYSFGVVTLEVLMGKHPRD 409
E L E DV+S G+V +L G+ P D
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 128/283 (45%), Gaps = 46/283 (16%)
Query: 206 DFDIRYCIGTGGYGSVYKAQLPNGKV-FALKKLHTSEELAFIKSFKNEAQVLSQVLHRNI 264
D +++ +G G +G VY+ + A+K L E+ ++ F EA V+ ++ H N+
Sbjct: 12 DITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTL--KEDTMEVEEFLKEAAVMKEIKHPNL 69
Query: 265 VKLYGYCLHKKCMFLIYEYMERGSLF-----CNLHNNEDAVELDWAKRVNIVKAMAHALA 319
V+L G C + ++I E+M G+L CN V L A ++ + A+
Sbjct: 70 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQI------SSAME 123
Query: 320 YLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGT---YGYIA 376
YL + IHRD+++ N L+ VADFG +RL+ D+ T AG + A
Sbjct: 124 YLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTX--TAHAGAKFPIKWTA 178
Query: 377 PE-LAYTMVMTEKCDVYSFGVVTLEVL---MGKHPRDIXXXXXXXXDP-KIMLIDVLDQR 431
PE LAY + K DV++FGV+ E+ M +P DP ++ + D R
Sbjct: 179 PESLAYNK-FSIKSDVWAFGVLLWEIATYGMSPYP---------GIDPSQVYELLEKDYR 228
Query: 432 L--PPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEF 472
+ P KV + AC Q NP RP+ + Q F
Sbjct: 229 MERPEGCPEKVYE-------LMRACWQWNPSDRPSFAEIHQAF 264
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 98/213 (46%), Gaps = 16/213 (7%)
Query: 204 TEDFDIRYCIGTGGYGSVYKAQLPNGKV----FALKKLHTSEELAFIKSFKNEAQVLSQV 259
ED+D+ +G G YG V QL +V A+K + + ++ K E + +
Sbjct: 5 VEDWDLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 61
Query: 260 LHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALA 319
H N+VK YG+ +L EY G LF + + E D A+R + +
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQR--FFHQLMAGVV 118
Query: 320 YLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTL--LAGTYGYIAP 377
YLH I HRDI N+LL+ + ++DFG A + ++ R L + GT Y+AP
Sbjct: 119 YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 378 E-LAYTMVMTEKCDVYSFGVVTLEVLMGKHPRD 409
E L E DV+S G+V +L G+ P D
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 98/213 (46%), Gaps = 16/213 (7%)
Query: 204 TEDFDIRYCIGTGGYGSVYKAQLPNGKV----FALKKLHTSEELAFIKSFKNEAQVLSQV 259
ED+D+ +G G YG V QL +V A+K + + ++ K E + +
Sbjct: 5 VEDWDLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 61
Query: 260 LHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALA 319
H N+VK YG+ +L EY G LF + + E D A+R + +
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQR--FFHQLMAGVV 118
Query: 320 YLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTL--LAGTYGYIAP 377
YLH I HRDI N+LL+ + ++DFG A + ++ R L + GT Y+AP
Sbjct: 119 YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAP 175
Query: 378 E-LAYTMVMTEKCDVYSFGVVTLEVLMGKHPRD 409
E L E DV+S G+V +L G+ P D
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 98/213 (46%), Gaps = 16/213 (7%)
Query: 204 TEDFDIRYCIGTGGYGSVYKAQLPNGKV----FALKKLHTSEELAFIKSFKNEAQVLSQV 259
ED+D+ +G G YG V QL +V A+K + + ++ K E + +
Sbjct: 5 VEDWDLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 61
Query: 260 LHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALA 319
H N+VK YG+ +L EY G LF + + E D A+R + +
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQR--FFHQLMAGVV 118
Query: 320 YLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTL--LAGTYGYIAP 377
YLH I HRDI N+LL+ + ++DFG A + ++ R L + GT Y+AP
Sbjct: 119 YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAP 175
Query: 378 E-LAYTMVMTEKCDVYSFGVVTLEVLMGKHPRD 409
E L E DV+S G+V +L G+ P D
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 98/212 (46%), Gaps = 16/212 (7%)
Query: 205 EDFDIRYCIGTGGYGSVYKAQLPNGKV----FALKKLHTSEELAFIKSFKNEAQVLSQVL 260
ED+D+ +G G YG V QL +V A+K + + ++ K E + +
Sbjct: 6 EDWDLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN 62
Query: 261 HRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAY 320
H N+VK YG+ +L EY G LF + + E D A+R + + Y
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQR--FFHQLMAGVVY 119
Query: 321 LHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTL--LAGTYGYIAPE 378
LH I HRDI N+LL+ + ++DFG A + ++ R L + GT Y+APE
Sbjct: 120 LH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
Query: 379 -LAYTMVMTEKCDVYSFGVVTLEVLMGKHPRD 409
L E DV+S G+V +L G+ P D
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 98/213 (46%), Gaps = 16/213 (7%)
Query: 204 TEDFDIRYCIGTGGYGSVYKAQLPNGKV----FALKKLHTSEELAFIKSFKNEAQVLSQV 259
ED+D+ +G G YG V QL +V A+K + + ++ K E + +
Sbjct: 6 VEDWDLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 62
Query: 260 LHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALA 319
H N+VK YG+ +L EY G LF + + E D A+R + +
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQR--FFHQLMAGVV 119
Query: 320 YLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTL--LAGTYGYIAP 377
YLH I HRDI N+LL+ + ++DFG A + ++ R L + GT Y+AP
Sbjct: 120 YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 378 E-LAYTMVMTEKCDVYSFGVVTLEVLMGKHPRD 409
E L E DV+S G+V +L G+ P D
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 98/212 (46%), Gaps = 16/212 (7%)
Query: 205 EDFDIRYCIGTGGYGSVYKAQLPNGKV----FALKKLHTSEELAFIKSFKNEAQVLSQVL 260
ED+D+ +G G YG V QL +V A+K + + ++ K E + +
Sbjct: 7 EDWDLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN 63
Query: 261 HRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAY 320
H N+VK YG+ +L EY G LF + + E D A+R + + Y
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQR--FFHQLMAGVVY 120
Query: 321 LHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTL--LAGTYGYIAPE 378
LH I HRDI N+LL+ + ++DFG A + ++ R L + GT Y+APE
Sbjct: 121 LH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
Query: 379 -LAYTMVMTEKCDVYSFGVVTLEVLMGKHPRD 409
L E DV+S G+V +L G+ P D
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 98/213 (46%), Gaps = 16/213 (7%)
Query: 204 TEDFDIRYCIGTGGYGSVYKAQLPNGKV----FALKKLHTSEELAFIKSFKNEAQVLSQV 259
ED+D+ +G G YG V QL +V A+K + + ++ K E + +
Sbjct: 4 VEDWDLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 60
Query: 260 LHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALA 319
H N+VK YG+ +L EY G LF + + E D A+R + +
Sbjct: 61 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQR--FFHQLMAGVV 117
Query: 320 YLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTL--LAGTYGYIAP 377
YLH I HRDI N+LL+ + ++DFG A + ++ R L + GT Y+AP
Sbjct: 118 YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 174
Query: 378 E-LAYTMVMTEKCDVYSFGVVTLEVLMGKHPRD 409
E L E DV+S G+V +L G+ P D
Sbjct: 175 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 207
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 98/213 (46%), Gaps = 16/213 (7%)
Query: 204 TEDFDIRYCIGTGGYGSVYKAQLPNGKV----FALKKLHTSEELAFIKSFKNEAQVLSQV 259
ED+D+ +G G YG V QL +V A+K + + ++ K E + +
Sbjct: 5 VEDWDLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 61
Query: 260 LHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALA 319
H N+VK YG+ +L EY G LF + + E D A+R + +
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQR--FFHQLMAGVV 118
Query: 320 YLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTL--LAGTYGYIAP 377
YLH I HRDI N+LL+ + ++DFG A + ++ R L + GT Y+AP
Sbjct: 119 YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 378 E-LAYTMVMTEKCDVYSFGVVTLEVLMGKHPRD 409
E L E DV+S G+V +L G+ P D
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 98/213 (46%), Gaps = 16/213 (7%)
Query: 204 TEDFDIRYCIGTGGYGSVYKAQLPNGKV----FALKKLHTSEELAFIKSFKNEAQVLSQV 259
ED+D+ +G G YG V QL +V A+K + + ++ K E + +
Sbjct: 5 VEDWDLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 61
Query: 260 LHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALA 319
H N+VK YG+ +L EY G LF + + E D A+R + +
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQR--FFHQLMAGVV 118
Query: 320 YLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTL--LAGTYGYIAP 377
YLH I HRDI N+LL+ + ++DFG A + ++ R L + GT Y+AP
Sbjct: 119 YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 378 E-LAYTMVMTEKCDVYSFGVVTLEVLMGKHPRD 409
E L E DV+S G+V +L G+ P D
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 98/213 (46%), Gaps = 16/213 (7%)
Query: 204 TEDFDIRYCIGTGGYGSVYKAQLPNGKV----FALKKLHTSEELAFIKSFKNEAQVLSQV 259
ED+D+ +G G YG V QL +V A+K + + ++ K E + +
Sbjct: 5 VEDWDLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 61
Query: 260 LHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALA 319
H N+VK YG+ +L EY G LF + + E D A+R + +
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQR--FFHQLMAGVV 118
Query: 320 YLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTL--LAGTYGYIAP 377
YLH I HRDI N+LL+ + ++DFG A + ++ R L + GT Y+AP
Sbjct: 119 YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 378 E-LAYTMVMTEKCDVYSFGVVTLEVLMGKHPRD 409
E L E DV+S G+V +L G+ P D
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 98/213 (46%), Gaps = 16/213 (7%)
Query: 204 TEDFDIRYCIGTGGYGSVYKAQLPNGKV----FALKKLHTSEELAFIKSFKNEAQVLSQV 259
ED+D+ +G G YG V QL +V A+K + + ++ K E + +
Sbjct: 5 VEDWDLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 61
Query: 260 LHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALA 319
H N+VK YG+ +L EY G LF + + E D A+R + +
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQR--FFHQLMAGVV 118
Query: 320 YLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTL--LAGTYGYIAP 377
YLH I HRDI N+LL+ + ++DFG A + ++ R L + GT Y+AP
Sbjct: 119 YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAP 175
Query: 378 E-LAYTMVMTEKCDVYSFGVVTLEVLMGKHPRD 409
E L E DV+S G+V +L G+ P D
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 135/274 (49%), Gaps = 25/274 (9%)
Query: 205 EDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNI 264
E + +G G +G V+ A A+K + +++F EA V+ + H +
Sbjct: 15 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS--MSVEAFLAEANVMKTLQHDKL 72
Query: 265 VKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHD 324
VKL+ + K+ +++I E+M +GSL L ++E + + K ++ +A +A++
Sbjct: 73 VKLHA-VVTKEPIYIITEFMAKGSLLDFLKSDEGSKQ-PLPKLIDFSAQIAEGMAFIEQR 130
Query: 325 CSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADS-SNRTLLAGTYGYIAPELAYTM 383
+ IHRD+ + NIL+++ L +ADFG AR++ + + R + APE
Sbjct: 131 ---NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFG 187
Query: 384 VMTEKCDVYSFGVVTLEVLM-GKHPRDIXXXXXXXXDPKIMLIDVLDQRLPPPVD-RKVI 441
T K DV+SFG++ +E++ G+ P +P+++ R+P P + + +
Sbjct: 188 SFTIKSDVWSFGILLMEIVTYGRIP------YPGMSNPEVIRALERGYRMPRPENCPEEL 241
Query: 442 RDILLISTVSFACLQSNPKSRPT---MQSVSQEF 472
+I++ C ++ P+ RPT +QSV +F
Sbjct: 242 YNIMM------RCWKNRPEERPTFEYIQSVLDDF 269
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 125/269 (46%), Gaps = 36/269 (13%)
Query: 213 IGTGGYGSVYKA-QLPNGKVFALKKL----HTSEELAFIKSFKNEAQVLSQVLHRNIVKL 267
IG G G V A + GK A+KK+ EL F NE ++ H N+V +
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLF-----NEVVIMRDYHHDNVVDM 107
Query: 268 YGYCLHKKCMFLIYEYMERGSL---FCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHD 324
Y L ++++ E++E G+L + NE+ + + ++ AL+YLH+
Sbjct: 108 YSSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQI-------ATVCLSVLRALSYLHNQ 160
Query: 325 CSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYTMV 384
+IHRDI S++ILL S ++DFG + + R L GT ++APE+ +
Sbjct: 161 ---GVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEVISRLP 217
Query: 385 MTEKCDVYSFGVVTLEVLMGKHPRDIXXXXXXXXDPKIMLIDVLDQRLPPPVDRKVIRDI 444
+ D++S G++ +E++ G+ P +P + + + LPP V +D+
Sbjct: 218 YGTEVDIWSLGIMVIEMIDGEPP--------YFNEPPLQAMRRIRDSLPPRV-----KDL 264
Query: 445 LLISTVSFACLQSNPKSRPTMQSVSQEFL 473
+S+V L P+ ++ +QE L
Sbjct: 265 HKVSSVLRGFLDLMLVREPSQRATAQELL 293
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 99/194 (51%), Gaps = 8/194 (4%)
Query: 213 IGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFK-NEAQVLSQVLHRNIVKLYGYC 271
IG G YG VYKAQ G+ FALKK+ +E I S E +L ++ H NIVKLY
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 272 LHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIH 331
KK + L++E++++ L L E +E AK + + + + +AY H ++H
Sbjct: 70 HTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAK--SFLLQLLNGIAYCH---DRRVLH 123
Query: 332 RDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPE-LAYTMVMTEKCD 390
RD+ N+L+N + E +ADFG AR T T Y AP+ L + + D
Sbjct: 124 RDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTID 183
Query: 391 VYSFGVVTLEVLMG 404
++S G + E++ G
Sbjct: 184 IWSVGCIFAEMVNG 197
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 99/194 (51%), Gaps = 8/194 (4%)
Query: 213 IGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFK-NEAQVLSQVLHRNIVKLYGYC 271
IG G YG VYKAQ G+ FALKK+ +E I S E +L ++ H NIVKLY
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 272 LHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIH 331
KK + L++E++++ L L E +E AK + + + + +AY H ++H
Sbjct: 70 HTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAK--SFLLQLLNGIAYCH---DRRVLH 123
Query: 332 RDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPE-LAYTMVMTEKCD 390
RD+ N+L+N + E +ADFG AR T T Y AP+ L + + D
Sbjct: 124 RDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTID 183
Query: 391 VYSFGVVTLEVLMG 404
++S G + E++ G
Sbjct: 184 IWSVGCIFAEMVNG 197
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 109/227 (48%), Gaps = 38/227 (16%)
Query: 206 DFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKL-HTSEELAFIKSFKNEAQVLSQVLHRN 263
DF+ +G G +G V KA+ + + +A+KK+ HT E+L+ I S E +L+ + H+
Sbjct: 7 DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILS---EVMLLASLNHQY 63
Query: 264 IVKLYGYCLHKK-------------CMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNI 310
+V+ Y L ++ +F+ EY E G+L+ +H+ + D R +
Sbjct: 64 VVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWR--L 121
Query: 311 VKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLH----------- 359
+ + AL+Y+H S IIHRD+ NI ++ + DFG A+ +H
Sbjct: 122 FRQILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQ 178
Query: 360 ---ADSSNRTLLAGTYGYIAPE-LAYTMVMTEKCDVYSFGVVTLEVL 402
S N T GT Y+A E L T EK D+YS G++ E++
Sbjct: 179 NLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 101/208 (48%), Gaps = 12/208 (5%)
Query: 205 EDFDIRYCIGTGGYGSVYKAQ--LPNGKVFALKKLHT--SEELAFIKSFKNEAQVLSQVL 260
E + I +G GG +VY A+ + N KV A+K + E+ +K F+ E SQ+
Sbjct: 11 ERYKIVDKLGGGGMSTVYLAEDTILNIKV-AIKAIFIPPREKEETLKRFEREVHNSSQLS 69
Query: 261 HRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAY 320
H+NIV + C +L+ EY+E G + + +D A +N + + +
Sbjct: 70 HQNIVSMIDVDEEDDCYYLVMEYIE-GPTLSEYIESHGPLSVDTA--INFTNQILDGIKH 126
Query: 321 LHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRT-LLAGTYGYIAPEL 379
H I+HRDI NIL++S + DFG A+ L S +T + GT Y +PE
Sbjct: 127 AH---DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQ 183
Query: 380 AYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
A E D+YS G+V E+L+G+ P
Sbjct: 184 AKGEATDECTDIYSIGIVLYEMLVGEPP 211
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 99/194 (51%), Gaps = 8/194 (4%)
Query: 213 IGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFK-NEAQVLSQVLHRNIVKLYGYC 271
IG G YG VYKAQ G+ FALKK+ +E I S E +L ++ H NIVKLY
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 272 LHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIH 331
KK + L++E++++ L L E +E AK + + + + +AY H ++H
Sbjct: 70 HTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAK--SFLLQLLNGIAYCH---DRRVLH 123
Query: 332 RDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPE-LAYTMVMTEKCD 390
RD+ N+L+N + E +ADFG AR T T Y AP+ L + + D
Sbjct: 124 RDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTID 183
Query: 391 VYSFGVVTLEVLMG 404
++S G + E++ G
Sbjct: 184 IWSVGCIFAEMVNG 197
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 122/277 (44%), Gaps = 27/277 (9%)
Query: 205 EDFDIRYCIGTGGYGSVYKAQ-LPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRN 263
+D++++ IG+G V A P + A+K+++ + + E Q +SQ H N
Sbjct: 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 74
Query: 264 IVKLYGYCLHKKCMFLIYEYMERGSLFCNLHN-----NEDAVELDWAKRVNIVKAMAHAL 318
IV Y + K ++L+ + + GS+ + + + LD + I++ + L
Sbjct: 75 IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGL 134
Query: 319 AYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHAD-----SSNRTLLAGTYG 373
YLH + IHRD+ + NILL +ADFG + L + R GT
Sbjct: 135 EYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPC 191
Query: 374 YIAPELAYTMVMTE-KCDVYSFGVVTLEVLMG-----KHPRDIXXXXXXXXDPKIMLIDV 427
++APE+ + + K D++SFG+ +E+ G K+P DP + V
Sbjct: 192 WMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGV 251
Query: 428 LDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPT 464
D+ + + + I L CLQ +P+ RPT
Sbjct: 252 QDKEMLKKYGKSFRKMISL-------CLQKDPEKRPT 281
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 121/277 (43%), Gaps = 27/277 (9%)
Query: 205 EDFDIRYCIGTGGYGSVYKAQ-LPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRN 263
+D++++ IG+G V A P + A+K+++ + + E Q +SQ H N
Sbjct: 10 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 69
Query: 264 IVKLYGYCLHKKCMFLIYEYMERGSLFCNLHN-----NEDAVELDWAKRVNIVKAMAHAL 318
IV Y + K ++L+ + + GS+ + + + LD + I++ + L
Sbjct: 70 IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGL 129
Query: 319 AYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADS-----SNRTLLAGTYG 373
YLH + IHRD+ + NILL +ADFG + L R GT
Sbjct: 130 EYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPC 186
Query: 374 YIAPELAYTMVMTE-KCDVYSFGVVTLEVLMG-----KHPRDIXXXXXXXXDPKIMLIDV 427
++APE+ + + K D++SFG+ +E+ G K+P DP + V
Sbjct: 187 WMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGV 246
Query: 428 LDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPT 464
D+ + + + I L CLQ +P+ RPT
Sbjct: 247 QDKEMLKKYGKSFRKMISL-------CLQKDPEKRPT 276
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 135/274 (49%), Gaps = 25/274 (9%)
Query: 205 EDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNI 264
E + +G G +G V+ A A+K + +++F EA V+ + H +
Sbjct: 188 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS--MSVEAFLAEANVMKTLQHDKL 245
Query: 265 VKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHD 324
VKL+ + K+ +++I E+M +GSL L ++E + + K ++ +A +A++
Sbjct: 246 VKLHA-VVTKEPIYIITEFMAKGSLLDFLKSDEGSKQ-PLPKLIDFSAQIAEGMAFIEQR 303
Query: 325 CSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADS-SNRTLLAGTYGYIAPELAYTM 383
+ IHRD+ + NIL+++ L +ADFG AR++ + + R + APE
Sbjct: 304 ---NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFG 360
Query: 384 VMTEKCDVYSFGVVTLEVLM-GKHPRDIXXXXXXXXDPKIMLIDVLDQRLPPPVD-RKVI 441
T K DV+SFG++ +E++ G+ P +P+++ R+P P + + +
Sbjct: 361 SFTIKSDVWSFGILLMEIVTYGRIP------YPGMSNPEVIRALERGYRMPRPENCPEEL 414
Query: 442 RDILLISTVSFACLQSNPKSRPT---MQSVSQEF 472
+I++ C ++ P+ RPT +QSV +F
Sbjct: 415 YNIMM------RCWKNRPEERPTFEYIQSVLDDF 442
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 126/285 (44%), Gaps = 50/285 (17%)
Query: 206 DFDIRYCIGTGGYGSVYKAQLPNGKV-FALKKLHTSEELAFIKSFKNEAQVLSQVLHRNI 264
D +++ +G G YG VY+ + A+K L E+ ++ F EA V+ ++ H N+
Sbjct: 221 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL--KEDTMEVEEFLKEAAVMKEIKHPNL 278
Query: 265 VKLYGYCLHKKCMFLIYEYMERGSLF-----CNLHNNEDAVELDWAKRVNIVKAMAHALA 319
V+L G C + ++I E+M G+L CN V L A ++ + A+
Sbjct: 279 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQI------SSAME 332
Query: 320 YLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTY---GYIA 376
YL + IHR++++ N L+ VADFG +RL+ D+ T AG + A
Sbjct: 333 YLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTA 387
Query: 377 PE-LAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDIXXXXXXXXDPKIMLIDVL-----D 429
PE LAY + K DV++FGV+ E+ G P P I L V D
Sbjct: 388 PESLAYNK-FSIKSDVWAFGVLLWEIATYGMSPY-----------PGIDLSQVYELLEKD 435
Query: 430 QRL--PPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEF 472
R+ P KV + AC Q NP RP+ + Q F
Sbjct: 436 YRMERPEGCPEKVYE-------LMRACWQWNPSDRPSFAEIHQAF 473
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 126/285 (44%), Gaps = 50/285 (17%)
Query: 206 DFDIRYCIGTGGYGSVYKAQLPNGKV-FALKKLHTSEELAFIKSFKNEAQVLSQVLHRNI 264
D +++ +G G YG VY+ + A+K L E+ ++ F EA V+ ++ H N+
Sbjct: 218 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL--KEDTMEVEEFLKEAAVMKEIKHPNL 275
Query: 265 VKLYGYCLHKKCMFLIYEYMERGSLF-----CNLHNNEDAVELDWAKRVNIVKAMAHALA 319
V+L G C + ++I E+M G+L CN V L A ++ + A+
Sbjct: 276 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQI------SSAME 329
Query: 320 YLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTY---GYIA 376
YL + IHR++++ N L+ VADFG +RL+ D+ T AG + A
Sbjct: 330 YLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTA 384
Query: 377 PE-LAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDIXXXXXXXXDPKIMLIDVL-----D 429
PE LAY + K DV++FGV+ E+ G P P I L V D
Sbjct: 385 PESLAYNK-FSIKSDVWAFGVLLWEIATYGMSPY-----------PGIDLSQVYELLEKD 432
Query: 430 QRL--PPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEF 472
R+ P KV + AC Q NP RP+ + Q F
Sbjct: 433 YRMERPEGCPEKVYE-------LMRACWQWNPSDRPSFAEIHQAF 470
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 126/285 (44%), Gaps = 50/285 (17%)
Query: 206 DFDIRYCIGTGGYGSVYKAQLPNGKV-FALKKLHTSEELAFIKSFKNEAQVLSQVLHRNI 264
D +++ +G G YG VY+ + A+K L E+ ++ F EA V+ ++ H N+
Sbjct: 260 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL--KEDTMEVEEFLKEAAVMKEIKHPNL 317
Query: 265 VKLYGYCLHKKCMFLIYEYMERGSLF-----CNLHNNEDAVELDWAKRVNIVKAMAHALA 319
V+L G C + ++I E+M G+L CN V L A ++ + A+
Sbjct: 318 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQI------SSAME 371
Query: 320 YLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTY---GYIA 376
YL + IHR++++ N L+ VADFG +RL+ D+ T AG + A
Sbjct: 372 YLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTA 426
Query: 377 PE-LAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDIXXXXXXXXDPKIMLIDVL-----D 429
PE LAY + K DV++FGV+ E+ G P P I L V D
Sbjct: 427 PESLAYNK-FSIKSDVWAFGVLLWEIATYGMSPY-----------PGIDLSQVYELLEKD 474
Query: 430 QRL--PPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEF 472
R+ P KV + AC Q NP RP+ + Q F
Sbjct: 475 YRMERPEGCPEKVYE-------LMRACWQWNPSDRPSFAEIHQAF 512
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 125/277 (45%), Gaps = 26/277 (9%)
Query: 205 EDFDIRYCIGTGGYGSVYK-AQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRN 263
+DF+ +G G G V+K + P+G V A K +H + A E QVL +
Sbjct: 9 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 68
Query: 264 IVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHH 323
IV YG + + E+M+ GSL L E K V+I A+ L YL
Sbjct: 69 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGK-VSI--AVIKGLTYLRE 125
Query: 324 DCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYTM 383
I+HRD+ +NIL+NS+ E + DFG + L + +N GT Y++PE
Sbjct: 126 --KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMANE--FVGTRSYMSPERLQGT 181
Query: 384 VMTEKCDVYSFGVVTLEVLMGKHPRDIXXXXXXXXDPKIMLIDVLDQRL--PPPVDRKVI 441
+ + D++S G+ +E+ +G++PR P + + ++LD + PPP K+
Sbjct: 182 HYSVQSDIWSMGLSLVEMAVGRYPR-----------PPMAIFELLDYIVNEPPP---KLP 227
Query: 442 RDILLISTVSFA--CLQSNPKSRPTMQSVSQEFLITR 476
+ + F CL NP R ++ + I R
Sbjct: 228 SAVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKR 264
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 95/204 (46%), Gaps = 21/204 (10%)
Query: 213 IGTGGYGSVYKAQLPNGK-VFALK--------KLHTSEELAFIKSFKNEAQVLSQVLHRN 263
+G GG+ ++ + K VFA K K H E+++ E + + H++
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSM------EISIHRSLAHQH 102
Query: 264 IVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHH 323
+V +G+ +F++ E R SL LH A+ A+ ++ + YLH
Sbjct: 103 VVGFHGFFEDNDFVFVVLELCRRRSLL-ELHKRRKALTEPEARYY--LRQIVLGCQYLHR 159
Query: 324 DCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYTM 383
+ +IHRD+ N+ LN LE + DFG A + D + +L GT YIAPE+
Sbjct: 160 N---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKK 216
Query: 384 VMTEKCDVYSFGVVTLEVLMGKHP 407
+ + DV+S G + +L+GK P
Sbjct: 217 GHSFEVDVWSIGCIMYTLLVGKPP 240
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 95/204 (46%), Gaps = 21/204 (10%)
Query: 213 IGTGGYGSVYKAQLPNGK-VFALK--------KLHTSEELAFIKSFKNEAQVLSQVLHRN 263
+G GG+ ++ + K VFA K K H E+++ E + + H++
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSM------EISIHRSLAHQH 100
Query: 264 IVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHH 323
+V +G+ +F++ E R SL LH A+ A+ ++ + YLH
Sbjct: 101 VVGFHGFFEDNDFVFVVLELCRRRSLL-ELHKRRKALTEPEAR--YYLRQIVLGCQYLHR 157
Query: 324 DCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYTM 383
+ +IHRD+ N+ LN LE + DFG A + D + +L GT YIAPE+
Sbjct: 158 N---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKK 214
Query: 384 VMTEKCDVYSFGVVTLEVLMGKHP 407
+ + DV+S G + +L+GK P
Sbjct: 215 GHSFEVDVWSIGCIMYTLLVGKPP 238
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 101/203 (49%), Gaps = 23/203 (11%)
Query: 213 IGTGGYGSVYKAQL-PNGKVFALKKL----HTSEELAFIKSFKNEAQVLSQVLHRNIVKL 267
IG G G V A + +GK+ A+KK+ EL F NE ++ H N+V++
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF-----NEVVIMRDYQHENVVEM 91
Query: 268 YGYCLHKKCMFLIYEYMERGSL---FCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHD 324
Y L ++++ E++E G+L + NE+ + + A+ AL+ LH
Sbjct: 92 YNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQI-------AAVCLAVLQALSVLH-- 142
Query: 325 CSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYTMV 384
+ +IHRDI S++ILL ++DFG + + R L GT ++APEL +
Sbjct: 143 -AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLP 201
Query: 385 MTEKCDVYSFGVVTLEVLMGKHP 407
+ D++S G++ +E++ G+ P
Sbjct: 202 YGPEVDIWSLGIMVIEMVDGEPP 224
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 101/203 (49%), Gaps = 23/203 (11%)
Query: 213 IGTGGYGSVYKAQL-PNGKVFALKKL----HTSEELAFIKSFKNEAQVLSQVLHRNIVKL 267
IG G G V A + +GK+ A+KK+ EL F NE ++ H N+V++
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF-----NEVVIMRDYQHENVVEM 213
Query: 268 YGYCLHKKCMFLIYEYMERGSL---FCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHD 324
Y L ++++ E++E G+L + NE+ + + A+ AL+ LH
Sbjct: 214 YNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQI-------AAVCLAVLQALSVLH-- 264
Query: 325 CSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYTMV 384
+ +IHRDI S++ILL ++DFG + + R L GT ++APEL +
Sbjct: 265 -AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLP 323
Query: 385 MTEKCDVYSFGVVTLEVLMGKHP 407
+ D++S G++ +E++ G+ P
Sbjct: 324 YGPEVDIWSLGIMVIEMVDGEPP 346
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 101/203 (49%), Gaps = 23/203 (11%)
Query: 213 IGTGGYGSVYKAQL-PNGKVFALKKL----HTSEELAFIKSFKNEAQVLSQVLHRNIVKL 267
IG G G V A + +GK+ A+KK+ EL F NE ++ H N+V++
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF-----NEVVIMRDYQHENVVEM 93
Query: 268 YGYCLHKKCMFLIYEYMERGSL---FCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHD 324
Y L ++++ E++E G+L + NE+ + + A+ AL+ LH
Sbjct: 94 YNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQI-------AAVCLAVLQALSVLH-- 144
Query: 325 CSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYTMV 384
+ +IHRDI S++ILL ++DFG + + R L GT ++APEL +
Sbjct: 145 -AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLP 203
Query: 385 MTEKCDVYSFGVVTLEVLMGKHP 407
+ D++S G++ +E++ G+ P
Sbjct: 204 YGPEVDIWSLGIMVIEMVDGEPP 226
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 127/264 (48%), Gaps = 32/264 (12%)
Query: 213 IGTGGYGSV----YKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLY 268
+G+G +G V +K Q + V +K+ SE+ F EAQ + ++ H +VK Y
Sbjct: 16 LGSGQFGVVKLGKWKGQY-DVAVKMIKEGSMSED-----EFFQEAQTMMKLSHPKLVKFY 69
Query: 269 GYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPS 328
G C + ++++ EY+ G L L ++ +E ++ + + + +A+L S
Sbjct: 70 GVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEP--SQLLEMCYDVCEGMAFLE---SHQ 124
Query: 329 IIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGT---YGYIAPELAYTMVM 385
IHRD+++ N L++ L V+DFG R + D ++ GT + APE+ +
Sbjct: 125 FIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSV--GTKFPVKWSAPEVFHYFKY 182
Query: 386 TEKCDVYSFGVVTLEVL-MGKHPRDIXXXXXXXXDPKIMLIDVLDQRLPPPVDRKVIRDI 444
+ K DV++FG++ EV +GK P D+ + +++L RL P + D
Sbjct: 183 SSKSDVWAFGILMWEVFSLGKMPYDL------YTNSEVVLKVSQGHRLYRP---HLASDT 233
Query: 445 LLISTVSFACLQSNPKSRPTMQSV 468
I + ++C P+ RPT Q +
Sbjct: 234 --IYQIMYSCWHELPEKRPTFQQL 255
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 101/203 (49%), Gaps = 23/203 (11%)
Query: 213 IGTGGYGSVYKAQL-PNGKVFALKKL----HTSEELAFIKSFKNEAQVLSQVLHRNIVKL 267
IG G G V A + +GK+ A+KK+ EL F NE ++ H N+V++
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF-----NEVVIMRDYQHENVVEM 82
Query: 268 YGYCLHKKCMFLIYEYMERGSL---FCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHD 324
Y L ++++ E++E G+L + NE+ + + A+ AL+ LH
Sbjct: 83 YNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQI-------AAVCLAVLQALSVLH-- 133
Query: 325 CSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYTMV 384
+ +IHRDI S++ILL ++DFG + + R L GT ++APEL +
Sbjct: 134 -AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLP 192
Query: 385 MTEKCDVYSFGVVTLEVLMGKHP 407
+ D++S G++ +E++ G+ P
Sbjct: 193 YGPEVDIWSLGIMVIEMVDGEPP 215
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 105/214 (49%), Gaps = 10/214 (4%)
Query: 197 YEDLIEA-TEDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQV 255
+ED E E + +G G G V+ A+K L +F EA +
Sbjct: 4 WEDAWEVPRETLKLVERLGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSP--DAFLAEANL 61
Query: 256 LSQVLHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMA 315
+ Q+ H+ +V+LY + ++ +++I EYME GSL + ++L K +++ +A
Sbjct: 62 MKQLQHQRLVRLYA-VVTQEPIYIITEYMENGSL-VDFLKTPSGIKLTINKLLDMAAQIA 119
Query: 316 HALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLH-ADSSNRTLLAGTYGY 374
+A++ + IHRD+ + NIL++ L +ADFG ARL+ A+ + R +
Sbjct: 120 EGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKW 176
Query: 375 IAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHP 407
APE T K DV+SFG++ E++ G+ P
Sbjct: 177 TAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 210
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 123/280 (43%), Gaps = 40/280 (14%)
Query: 213 IGTGGYGSVYKAQLPNGK-VFALK--------KLHTSEELAFIKSFKNEAQVLSQVLHRN 263
+G GG+ ++ + K VFA K K H E+++ E + + H++
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSM------EISIHRSLAHQH 76
Query: 264 IVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHH 323
+V +G+ +F++ E R SL LH A+ A+ ++ + YLH
Sbjct: 77 VVGFHGFFEDNDFVFVVLELCRRRSLL-ELHKRRKALTEPEAR--YYLRQIVLGCQYLHR 133
Query: 324 DCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYTM 383
+ +IHRD+ N+ LN LE + DFG A + D + +L GT YIAPE+
Sbjct: 134 N---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKK 190
Query: 384 VMTEKCDVYSFGVVTLEVLMGKHPRDIXXXXXXXXDPKIMLIDVLDQRLPP---PVDRKV 440
+ + DV+S G + +L+GK P + + I + +P PV +
Sbjct: 191 GHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETY-----LRIKKNEYSIPKHINPVAASL 245
Query: 441 IRDILLISTVSFACLQSNPKSRPTMQS-VSQEFLITRKTP 479
I+ + LQ++P +RPT+ ++ EF + P
Sbjct: 246 IQKM----------LQTDPTARPTINELLNDEFFTSGYIP 275
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 21/204 (10%)
Query: 213 IGTGGYGSVYKAQLPNGK-VFALK--------KLHTSEELAFIKSFKNEAQVLSQVLHRN 263
+G GG+ ++ + K VFA K K H E+++ E + + H++
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSM------EISIHRSLAHQH 78
Query: 264 IVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHH 323
+V +G+ +F++ E R SL LH A+ A+ ++ + YLH
Sbjct: 79 VVGFHGFFEDNDFVFVVLELCRRRSLL-ELHKRRKALTEPEARYY--LRQIVLGCQYLHR 135
Query: 324 DCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYTM 383
+ +IHRD+ N+ LN LE + DFG A + D + L GT YIAPE+
Sbjct: 136 N---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKK 192
Query: 384 VMTEKCDVYSFGVVTLEVLMGKHP 407
+ + DV+S G + +L+GK P
Sbjct: 193 GHSFEVDVWSIGCIMYTLLVGKPP 216
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 101/203 (49%), Gaps = 23/203 (11%)
Query: 213 IGTGGYGSVYKAQL-PNGKVFALKKL----HTSEELAFIKSFKNEAQVLSQVLHRNIVKL 267
IG G G V A + +GK+ A+KK+ EL F NE ++ H N+V++
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF-----NEVVIMRDYQHENVVEM 86
Query: 268 YGYCLHKKCMFLIYEYMERGSL---FCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHD 324
Y L ++++ E++E G+L + NE+ + + A+ AL+ LH
Sbjct: 87 YNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQI-------AAVCLAVLQALSVLH-- 137
Query: 325 CSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYTMV 384
+ +IHRDI S++ILL ++DFG + + R L GT ++APEL +
Sbjct: 138 -AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLP 196
Query: 385 MTEKCDVYSFGVVTLEVLMGKHP 407
+ D++S G++ +E++ G+ P
Sbjct: 197 YGPEVDIWSLGIMVIEMVDGEPP 219
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 97/213 (45%), Gaps = 16/213 (7%)
Query: 204 TEDFDIRYCIGTGGYGSVYKAQLPNGKV----FALKKLHTSEELAFIKSFKNEAQVLSQV 259
ED+D+ +G G G V QL +V A+K + + ++ K E + +
Sbjct: 5 VEDWDLVQTLGEGAAGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 61
Query: 260 LHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALA 319
H N+VK YG+ +L EY G LF + + E D A+R + +
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQR--FFHQLMAGVV 118
Query: 320 YLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTL--LAGTYGYIAP 377
YLH I HRDI N+LL+ + ++DFG A + ++ R L + GT Y+AP
Sbjct: 119 YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 378 E-LAYTMVMTEKCDVYSFGVVTLEVLMGKHPRD 409
E L E DV+S G+V +L G+ P D
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 21/204 (10%)
Query: 213 IGTGGYGSVYKAQLPNGK-VFALK--------KLHTSEELAFIKSFKNEAQVLSQVLHRN 263
+G GG+ ++ + K VFA K K H E+++ E + + H++
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSM------EISIHRSLAHQH 78
Query: 264 IVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHH 323
+V +G+ +F++ E R SL LH A+ A+ ++ + YLH
Sbjct: 79 VVGFHGFFEDNDFVFVVLELCRRRSLL-ELHKRRKALTEPEARYY--LRQIVLGCQYLHR 135
Query: 324 DCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYTM 383
+ +IHRD+ N+ LN LE + DFG A + D + L GT YIAPE+
Sbjct: 136 N---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKK 192
Query: 384 VMTEKCDVYSFGVVTLEVLMGKHP 407
+ + DV+S G + +L+GK P
Sbjct: 193 GHSFEVDVWSIGCIMYTLLVGKPP 216
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 101/203 (49%), Gaps = 23/203 (11%)
Query: 213 IGTGGYGSVYKAQL-PNGKVFALKKL----HTSEELAFIKSFKNEAQVLSQVLHRNIVKL 267
IG G G V A + +GK+ A+KK+ EL F NE ++ H N+V++
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF-----NEVVIMRDYQHENVVEM 136
Query: 268 YGYCLHKKCMFLIYEYMERGSL---FCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHD 324
Y L ++++ E++E G+L + NE+ + + A+ AL+ LH
Sbjct: 137 YNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQI-------AAVCLAVLQALSVLH-- 187
Query: 325 CSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYTMV 384
+ +IHRDI S++ILL ++DFG + + R L GT ++APEL +
Sbjct: 188 -AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLP 246
Query: 385 MTEKCDVYSFGVVTLEVLMGKHP 407
+ D++S G++ +E++ G+ P
Sbjct: 247 YGPEVDIWSLGIMVIEMVDGEPP 269
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 102/200 (51%), Gaps = 17/200 (8%)
Query: 213 IGTGGYGSVYKAQLPN-GKVFALKKL----HTSEELAFIKSFKNEAQVLSQVLHRNIVKL 267
IG G G V A+ + G+ A+K + EL F NE ++ H N+V++
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLF-----NEVVIMRDYQHFNVVEM 107
Query: 268 YGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSP 327
Y L + ++++ E+++ G+L + V L+ + + +A+ ALAYLH +
Sbjct: 108 YKSYLVGEELWVLMEFLQGGAL----TDIVSQVRLNEEQIATVCEAVLQALAYLH---AQ 160
Query: 328 SIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYTMVMTE 387
+IHRDI S++ILL ++DFG + D R L GT ++APE+ +
Sbjct: 161 GVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXLVGTPYWMAPEVISRSLYAT 220
Query: 388 KCDVYSFGVVTLEVLMGKHP 407
+ D++S G++ +E++ G+ P
Sbjct: 221 EVDIWSLGIMVIEMVDGEPP 240
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 99/195 (50%), Gaps = 8/195 (4%)
Query: 213 IGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFK-NEAQVLSQVLHRNIVKLYGYC 271
+G G YG VYKA+ G++ ALK++ E I S E +L ++ H NIV L
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 272 LHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIH 331
++C+ L++E+ME+ L L N+ ++ D ++ + + + +A+ H I+H
Sbjct: 89 HSERCLTLVFEFMEK-DLKKVLDENKTGLQ-DSQIKIYLYQLL-RGVAHCHQH---RILH 142
Query: 332 RDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPE-LAYTMVMTEKCD 390
RD+ N+L+NS +ADFG AR + T T Y AP+ L + + D
Sbjct: 143 RDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVD 202
Query: 391 VYSFGVVTLEVLMGK 405
++S G + E++ GK
Sbjct: 203 IWSIGCIFAEMITGK 217
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 21/204 (10%)
Query: 213 IGTGGYGSVYKAQLPNGK-VFALK--------KLHTSEELAFIKSFKNEAQVLSQVLHRN 263
+G GG+ ++ + K VFA K K H E+++ E + + H++
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSM------EISIHRSLAHQH 82
Query: 264 IVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHH 323
+V +G+ +F++ E R SL LH A+ A+ ++ + YLH
Sbjct: 83 VVGFHGFFEDNDFVFVVLELCRRRSLL-ELHKRRKALTEPEARYY--LRQIVLGCQYLHR 139
Query: 324 DCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYTM 383
+ +IHRD+ N+ LN LE + DFG A + D + L GT YIAPE+
Sbjct: 140 N---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKK 196
Query: 384 VMTEKCDVYSFGVVTLEVLMGKHP 407
+ + DV+S G + +L+GK P
Sbjct: 197 GHSFEVDVWSIGCIMYTLLVGKPP 220
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 97/197 (49%), Gaps = 12/197 (6%)
Query: 213 IGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFK-NEAQVLSQVLHRNIVKLYGYC 271
+G G YG VYKA+ G++ ALK++ E I S E +L ++ H NIV L
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 272 LHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAK--RVNIVKAMAHALAYLHHDCSPSI 329
++C+ L++E+ME+ L L N+ ++ K +++ +AH + I
Sbjct: 89 HSERCLTLVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQH-------RI 140
Query: 330 IHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPE-LAYTMVMTEK 388
+HRD+ N+L+NS +ADFG AR + T T Y AP+ L + +
Sbjct: 141 LHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTS 200
Query: 389 CDVYSFGVVTLEVLMGK 405
D++S G + E++ GK
Sbjct: 201 VDIWSIGCIFAEMITGK 217
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 102/208 (49%), Gaps = 9/208 (4%)
Query: 197 YEDLIEA-TEDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQV 255
+ED E E + +G G +G V+ A+K L +F EA +
Sbjct: 13 WEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP--DAFLAEANL 70
Query: 256 LSQVLHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMA 315
+ Q+ H+ +V+LY + ++ +++I EYME GSL + ++L K +++ +A
Sbjct: 71 MKQLQHQRLVRLYA-VVTQEPIYIITEYMENGSL-VDFLKTPSGIKLTINKLLDMAAQIA 128
Query: 316 HALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHA-DSSNRTLLAGTYGY 374
+A++ + IHRD+ + NIL++ L +ADFG ARL+ + + R +
Sbjct: 129 EGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKW 185
Query: 375 IAPELAYTMVMTEKCDVYSFGVVTLEVL 402
APE T K DV+SFG++ E++
Sbjct: 186 TAPEAINYGTFTIKSDVWSFGILLTEIV 213
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 102/208 (49%), Gaps = 9/208 (4%)
Query: 197 YEDLIEA-TEDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQV 255
+ED E E + +G G +G V+ A+K L +F EA +
Sbjct: 10 WEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP--DAFLAEANL 67
Query: 256 LSQVLHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMA 315
+ Q+ H+ +V+LY + ++ +++I EYME GSL + ++L K +++ +A
Sbjct: 68 MKQLQHQRLVRLYA-VVTQEPIYIITEYMENGSL-VDFLKTPSGIKLTINKLLDMAAQIA 125
Query: 316 HALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHA-DSSNRTLLAGTYGY 374
+A++ + IHRD+ + NIL++ L +ADFG ARL+ + + R +
Sbjct: 126 EGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKW 182
Query: 375 IAPELAYTMVMTEKCDVYSFGVVTLEVL 402
APE T K DV+SFG++ E++
Sbjct: 183 TAPEAINYGTFTIKSDVWSFGILLTEIV 210
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 102/208 (49%), Gaps = 9/208 (4%)
Query: 197 YEDLIEA-TEDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQV 255
+ED E E + +G G +G V+ A+K L +F EA +
Sbjct: 12 WEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS--MSPDAFLAEANL 69
Query: 256 LSQVLHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMA 315
+ Q+ H+ +V+LY + ++ +++I EYME GSL + ++L K +++ +A
Sbjct: 70 MKQLQHQRLVRLYA-VVTQEPIYIITEYMENGSL-VDFLKTPSGIKLTINKLLDMAAQIA 127
Query: 316 HALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHA-DSSNRTLLAGTYGY 374
+A++ + IHRD+ + NIL++ L +ADFG ARL+ + + R +
Sbjct: 128 EGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKW 184
Query: 375 IAPELAYTMVMTEKCDVYSFGVVTLEVL 402
APE T K DV+SFG++ E++
Sbjct: 185 TAPEAINYGTFTIKSDVWSFGILLTEIV 212
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 99/197 (50%), Gaps = 8/197 (4%)
Query: 213 IGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCL 272
+G G +G V+ N A+K L +++F EA ++ + H +V+LY
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLKPG--TMSVQAFLEEANLMKTLQHDKLVRLYAVVT 77
Query: 273 HKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHR 332
++ +++I E+M +GSL L ++E L K ++ +A +AY+ + IHR
Sbjct: 78 KEEPIYIITEFMAKGSLLDFLKSDEGGKVL-LPKLIDFSAQIAEGMAYIERK---NYIHR 133
Query: 333 DISSNNILLNSKLEAFVADFGTARLLHADS-SNRTLLAGTYGYIAPELAYTMVMTEKCDV 391
D+ + N+L++ L +ADFG AR++ + + R + APE T K +V
Sbjct: 134 DLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSNV 193
Query: 392 YSFGVVTLEVLM-GKHP 407
+SFG++ E++ GK P
Sbjct: 194 WSFGILLYEIVTYGKIP 210
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 105/214 (49%), Gaps = 10/214 (4%)
Query: 197 YEDLIEA-TEDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQV 255
+ED E E + +G G +G V+ A+K L +F EA +
Sbjct: 6 WEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP--DAFLAEANL 63
Query: 256 LSQVLHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMA 315
+ Q+ H+ +V+LY + ++ +++I EYME GSL + ++L K +++ +A
Sbjct: 64 MKQLQHQRLVRLYA-VVTQEPIYIITEYMENGSL-VDFLKTPSGIKLTINKLLDMAAQIA 121
Query: 316 HALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHA-DSSNRTLLAGTYGY 374
+A++ + IHRD+ + NIL++ L +ADFG ARL+ + + R +
Sbjct: 122 EGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKW 178
Query: 375 IAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHP 407
APE T K DV+SFG++ E++ G+ P
Sbjct: 179 TAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 212
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 102/208 (49%), Gaps = 9/208 (4%)
Query: 197 YEDLIEA-TEDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQV 255
+ED E E + +G G +G V+ A+K L +F EA +
Sbjct: 4 WEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP--DAFLAEANL 61
Query: 256 LSQVLHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMA 315
+ Q+ H+ +V+LY + ++ +++I EYME GSL + ++L K +++ +A
Sbjct: 62 MKQLQHQRLVRLYA-VVTQEPIYIITEYMENGSL-VDFLKTPSGIKLTINKLLDMAAQIA 119
Query: 316 HALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHA-DSSNRTLLAGTYGY 374
+A++ + IHRD+ + NIL++ L +ADFG ARL+ + + R +
Sbjct: 120 EGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKW 176
Query: 375 IAPELAYTMVMTEKCDVYSFGVVTLEVL 402
APE T K DV+SFG++ E++
Sbjct: 177 TAPEAINYGTFTIKSDVWSFGILLTEIV 204
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 108/227 (47%), Gaps = 38/227 (16%)
Query: 206 DFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKL-HTSEELAFIKSFKNEAQVLSQVLHRN 263
DF+ +G G +G V KA+ + + +A+KK+ HT E+L+ I S E +L+ + H+
Sbjct: 7 DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILS---EVMLLASLNHQY 63
Query: 264 IVKLYGYCLHKK-------------CMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNI 310
+V+ Y L ++ +F+ EY E +L+ +H+ + D R +
Sbjct: 64 VVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWR--L 121
Query: 311 VKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLH----------- 359
+ + AL+Y+H S IIHRD+ NI ++ + DFG A+ +H
Sbjct: 122 FRQILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQ 178
Query: 360 ---ADSSNRTLLAGTYGYIAPE-LAYTMVMTEKCDVYSFGVVTLEVL 402
S N T GT Y+A E L T EK D+YS G++ E++
Sbjct: 179 NLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 99/197 (50%), Gaps = 9/197 (4%)
Query: 213 IGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCL 272
+G G +G V+ A+K L +F EA ++ Q+ H+ +V+LY +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP--DAFLAEANLMKQLQHQRLVRLYA-VV 77
Query: 273 HKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHR 332
++ +++I EYME GSL + ++L K +++ +A +A++ + IHR
Sbjct: 78 TQEPIYIITEYMENGSL-VDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHR 133
Query: 333 DISSNNILLNSKLEAFVADFGTARLLHA-DSSNRTLLAGTYGYIAPELAYTMVMTEKCDV 391
D+ + NIL++ L +ADFG ARL+ + + R + APE T K DV
Sbjct: 134 DLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDV 193
Query: 392 YSFGVVTLEVLM-GKHP 407
+SFG++ E++ G+ P
Sbjct: 194 WSFGILLTEIVTHGRIP 210
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 99/197 (50%), Gaps = 9/197 (4%)
Query: 213 IGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCL 272
+G G +G V+ A+K L +F EA ++ Q+ H+ +V+LY +
Sbjct: 26 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP--DAFLAEANLMKQLQHQRLVRLYA-VV 82
Query: 273 HKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHR 332
++ +++I EYME GSL + ++L K +++ +A +A++ + IHR
Sbjct: 83 TQEPIYIITEYMENGSL-VDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHR 138
Query: 333 DISSNNILLNSKLEAFVADFGTARLLHADS-SNRTLLAGTYGYIAPELAYTMVMTEKCDV 391
D+ + NIL++ L +ADFG ARL+ + + R + APE T K DV
Sbjct: 139 DLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDV 198
Query: 392 YSFGVVTLEVLM-GKHP 407
+SFG++ E++ G+ P
Sbjct: 199 WSFGILLTEIVTHGRIP 215
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 97/202 (48%), Gaps = 15/202 (7%)
Query: 213 IGTGGYGSVYKAQLPNGKVFALKKLHT---SEELAFIKSFKNEAQVLSQVLHRNIVKLYG 269
IG+G +G V+ N A+K + SEE F EA+V+ ++ H +V+LYG
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEE-----DFIEEAEVMMKLSHPKLVQLYG 69
Query: 270 YCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSI 329
CL + + L++E+ME G L L + + + + +AYL C +
Sbjct: 70 VCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAE--TLLGMCLDVCEGMAYLEEAC---V 124
Query: 330 IHRDISSNNILLNSKLEAFVADFGTARLLHADS-SNRTLLAGTYGYIAPELAYTMVMTEK 388
IHRD+++ N L+ V+DFG R + D ++ T + +PE+ + K
Sbjct: 125 IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSK 184
Query: 389 CDVYSFGVVTLEVLM-GKHPRD 409
DV+SFGV+ EV GK P +
Sbjct: 185 SDVWSFGVLMWEVFSEGKIPYE 206
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 105/214 (49%), Gaps = 10/214 (4%)
Query: 197 YEDLIEA-TEDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQV 255
+ED E E + +G G +G V+ A+K L +F EA +
Sbjct: 10 WEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP--DAFLAEANL 67
Query: 256 LSQVLHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMA 315
+ Q+ H+ +V+LY + ++ +++I EYME GSL + ++L K +++ +A
Sbjct: 68 MKQLQHQRLVRLYA-VVTQEPIYIITEYMENGSL-VDFLKTPSGIKLTINKLLDMAAQIA 125
Query: 316 HALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADS-SNRTLLAGTYGY 374
+A++ + IHRD+ + NIL++ L +ADFG ARL+ + + R +
Sbjct: 126 EGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKW 182
Query: 375 IAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHP 407
APE T K DV+SFG++ E++ G+ P
Sbjct: 183 TAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 216
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 99/197 (50%), Gaps = 9/197 (4%)
Query: 213 IGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCL 272
+G G +G V+ A+K L +F EA ++ Q+ H+ +V+LY +
Sbjct: 22 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP--DAFLAEANLMKQLQHQRLVRLYA-VV 78
Query: 273 HKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHR 332
++ +++I EYME GSL + ++L K +++ +A +A++ + IHR
Sbjct: 79 TQEPIYIITEYMENGSL-VDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHR 134
Query: 333 DISSNNILLNSKLEAFVADFGTARLLHA-DSSNRTLLAGTYGYIAPELAYTMVMTEKCDV 391
D+ + NIL++ L +ADFG ARL+ + + R + APE T K DV
Sbjct: 135 DLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDV 194
Query: 392 YSFGVVTLEVLM-GKHP 407
+SFG++ E++ G+ P
Sbjct: 195 WSFGILLTEIVTHGRIP 211
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 102/208 (49%), Gaps = 9/208 (4%)
Query: 197 YEDLIEA-TEDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQV 255
+ED E E + +G G +G V+ A+K L +F EA +
Sbjct: 14 WEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP--DAFLAEANL 71
Query: 256 LSQVLHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMA 315
+ Q+ H+ +V+LY + ++ +++I EYME GSL + ++L K +++ +A
Sbjct: 72 MKQLQHQRLVRLYA-VVTQEPIYIITEYMENGSL-VDFLKTPSGIKLTINKLLDMAAQIA 129
Query: 316 HALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADS-SNRTLLAGTYGY 374
+A++ + IHRD+ + NIL++ L +ADFG ARL+ + + R +
Sbjct: 130 EGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKW 186
Query: 375 IAPELAYTMVMTEKCDVYSFGVVTLEVL 402
APE T K DV+SFG++ E++
Sbjct: 187 TAPEAINYGTFTIKSDVWSFGILLTEIV 214
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 97/202 (48%), Gaps = 15/202 (7%)
Query: 213 IGTGGYGSVYKAQLPNGKVFALKKLHT---SEELAFIKSFKNEAQVLSQVLHRNIVKLYG 269
IG+G +G V+ N A+K + SEE F EA+V+ ++ H +V+LYG
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEE-----DFIEEAEVMMKLSHPKLVQLYG 67
Query: 270 YCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSI 329
CL + + L++E+ME G L L + + + + +AYL C +
Sbjct: 68 VCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAE--TLLGMCLDVCEGMAYLEEAC---V 122
Query: 330 IHRDISSNNILLNSKLEAFVADFGTARLLHADS-SNRTLLAGTYGYIAPELAYTMVMTEK 388
IHRD+++ N L+ V+DFG R + D ++ T + +PE+ + K
Sbjct: 123 IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSK 182
Query: 389 CDVYSFGVVTLEVLM-GKHPRD 409
DV+SFGV+ EV GK P +
Sbjct: 183 SDVWSFGVLMWEVFSEGKIPYE 204
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 126/291 (43%), Gaps = 62/291 (21%)
Query: 206 DFDIRYCIGTGGYGSVYKAQLPNGKV-FALKKLHTSEELAFIKSFKNEAQVLSQVLHRNI 264
D +++ +G G YG VY + A+K L E+ ++ F EA V+ ++ H N+
Sbjct: 33 DITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTL--KEDTMEVEEFLKEAAVMKEIKHPNL 90
Query: 265 VKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHD 324
V+L G C + +++ EYM G+L LD+ + N + A L Y+
Sbjct: 91 VQLLGVCTLEPPFYIVTEYMPYGNL------------LDYLRECNREEVTAVVLLYMATQ 138
Query: 325 CSPSI--------IHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGT---YG 373
S ++ IHRD+++ N L+ VADFG +RL+ D+ T AG
Sbjct: 139 ISSAMEYLEKKNFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDT--YTAHAGAKFPIK 196
Query: 374 YIAPE-LAYTMVMTEKCDVYSFGVVTLEV-LMGKHPRDIXXXXXXXXDPKIMLIDVLD-- 429
+ APE LAY + K DV++FGV+ E+ G P P I L V D
Sbjct: 197 WTAPESLAYN-TFSIKSDVWAFGVLLWEIATYGMSPY-----------PGIDLSQVYDLL 244
Query: 430 ---QRLP-----PPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEF 472
R+ PP +++R AC + +P RP+ Q F
Sbjct: 245 EKGYRMEQPEGCPPKVYELMR----------ACWKWSPADRPSFAETHQAF 285
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 97/202 (48%), Gaps = 15/202 (7%)
Query: 213 IGTGGYGSVYKAQLPNGKVFALKKLHT---SEELAFIKSFKNEAQVLSQVLHRNIVKLYG 269
IG+G +G V+ N A+K + SEE F EA+V+ ++ H +V+LYG
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEE-----DFIEEAEVMMKLSHPKLVQLYG 72
Query: 270 YCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSI 329
CL + + L++E+ME G L L + + + + +AYL C +
Sbjct: 73 VCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAE--TLLGMCLDVCEGMAYLEEAC---V 127
Query: 330 IHRDISSNNILLNSKLEAFVADFGTARLLHADS-SNRTLLAGTYGYIAPELAYTMVMTEK 388
IHRD+++ N L+ V+DFG R + D ++ T + +PE+ + K
Sbjct: 128 IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSK 187
Query: 389 CDVYSFGVVTLEVLM-GKHPRD 409
DV+SFGV+ EV GK P +
Sbjct: 188 SDVWSFGVLMWEVFSEGKIPYE 209
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 99/197 (50%), Gaps = 9/197 (4%)
Query: 213 IGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCL 272
+G G +G V+ A+K L +F EA ++ Q+ H+ +V+LY +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP--DAFLAEANLMKQLQHQRLVRLYA-VV 77
Query: 273 HKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHR 332
++ +++I EYME GSL + ++L K +++ +A +A++ + IHR
Sbjct: 78 TQEPIYIITEYMENGSL-VDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHR 133
Query: 333 DISSNNILLNSKLEAFVADFGTARLLHADS-SNRTLLAGTYGYIAPELAYTMVMTEKCDV 391
D+ + NIL++ L +ADFG ARL+ + + R + APE T K DV
Sbjct: 134 DLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDV 193
Query: 392 YSFGVVTLEVLM-GKHP 407
+SFG++ E++ G+ P
Sbjct: 194 WSFGILLTEIVTHGRIP 210
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 99/197 (50%), Gaps = 9/197 (4%)
Query: 213 IGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCL 272
+G G +G V+ A+K L +F EA ++ Q+ H+ +V+LY +
Sbjct: 16 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP--DAFLAEANLMKQLQHQRLVRLYA-VV 72
Query: 273 HKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHR 332
++ +++I EYME GSL + ++L K +++ +A +A++ + IHR
Sbjct: 73 TQEPIYIITEYMENGSL-VDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHR 128
Query: 333 DISSNNILLNSKLEAFVADFGTARLLHADS-SNRTLLAGTYGYIAPELAYTMVMTEKCDV 391
D+ + NIL++ L +ADFG ARL+ + + R + APE T K DV
Sbjct: 129 DLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDV 188
Query: 392 YSFGVVTLEVLM-GKHP 407
+SFG++ E++ G+ P
Sbjct: 189 WSFGILLTEIVTHGRIP 205
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 102/206 (49%), Gaps = 29/206 (14%)
Query: 216 GGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLS--QVLHRNIVKLYGYCLH 273
G +G V+KAQL N V A+K ++ +S++NE +V S + H NI++ G
Sbjct: 35 GRFGCVWKAQLLNEYV-AVKIFPIQDK----QSWQNEYEVYSLPGMKHENILQFIGAEKR 89
Query: 274 KKC----MFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDC---- 325
++LI + E+GSL L N + W + +I + MA LAYLH D
Sbjct: 90 GTSVDVDLWLITAFHEKGSLSDFLKANV----VSWNELCHIAETMARGLAYLHEDIPGLK 145
Query: 326 ---SPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSS--NRTLLAGTYGYIAPELA 380
P+I HRDI S N+LL + L A +ADFG A A S + GT Y+APE+
Sbjct: 146 DGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVL 205
Query: 381 YTMVMTE-----KCDVYSFGVVTLEV 401
+ + + D+Y+ G+V E+
Sbjct: 206 EGAINFQRDAFLRIDMYAMGLVLWEL 231
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 107/219 (48%), Gaps = 32/219 (14%)
Query: 205 EDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVL--HR 262
D + C+G G YG V++ G+ A+K + +E KS+ E ++ + V+ H
Sbjct: 8 RDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSRDE----KSWFRETELYNTVMLRHE 62
Query: 263 NIVKLYGYCLHKK----CMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHAL 318
NI+ + + ++LI Y E GSL+ L LD + IV ++A L
Sbjct: 63 NILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQ----LTTLDTVSCLRIVLSIASGL 118
Query: 319 AYLHHDC-----SPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLA---- 369
A+LH + P+I HRD+ S NIL+ + +AD G A ++H+ S+N+ +
Sbjct: 119 AHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA-VMHSQSTNQLDVGNNPR 177
Query: 370 -GTYGYIAPELAYTMVMTE------KCDVYSFGVVTLEV 401
GT Y+APE+ + + + D+++FG+V EV
Sbjct: 178 VGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 124/273 (45%), Gaps = 29/273 (10%)
Query: 213 IGTGGYG-SVYKAQLPNGKVFALKKLHTSEELAFIKS-FKNEAQVLSQVLHRNIVKLYGY 270
IG G +G ++ +G+ + +K+++ S + + + E VL+ + H NIV+
Sbjct: 32 IGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRES 91
Query: 271 CLHKKCMFLIYEYMERGSLFCNLHNN------EDAVELDWAKRVNIVKAMAHALAYLHHD 324
++++ +Y E G LF ++ ED + LDW V I A+ H HD
Sbjct: 92 FEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQI-LDWF--VQICLALKHV-----HD 143
Query: 325 CSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYTMV 384
I+HRDI S NI L + DFG AR+L++ GT Y++PE+
Sbjct: 144 --RKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEICENKP 201
Query: 385 MTEKCDVYSFGVVTLEVLMGKHPRDIXXXXXXXXDPKIMLIDVLDQRLPPPVDRKVIRDI 444
K D+++ G V E+ KH + K +++ ++ PPV D+
Sbjct: 202 YNNKSDIWALGCVLYELCTLKHAFEAGSM-------KNLVLKIISGSF-PPVSLHYSYDL 253
Query: 445 LLISTVSFACLQSNPKSRPTMQSVSQEFLITRK 477
+ + F + NP+ RP++ S+ ++ I ++
Sbjct: 254 RSLVSQLF---KRNPRDRPSVNSILEKGFIAKR 283
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 105/212 (49%), Gaps = 32/212 (15%)
Query: 212 CIGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVL--HRNIVKLYG 269
C+G G YG V++ G+ A+K + +E KS+ E ++ + V+ H NI+
Sbjct: 44 CVGKGRYGEVWRGSW-QGENVAVKIFSSRDE----KSWFRETELYNTVMLRHENILGFIA 98
Query: 270 YCLHKK----CMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDC 325
+ + ++LI Y E GSL+ L LD + IV ++A LA+LH +
Sbjct: 99 SDMTSRHSSTQLWLITHYHEMGSLYDYLQ----LTTLDTVSCLRIVLSIASGLAHLHIEI 154
Query: 326 -----SPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLA-----GTYGYI 375
P+I HRD+ S NIL+ + +AD G A ++H+ S+N+ + GT Y+
Sbjct: 155 FGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA-VMHSQSTNQLDVGNNPRVGTKRYM 213
Query: 376 APELAYTMVMTE------KCDVYSFGVVTLEV 401
APE+ + + + D+++FG+V EV
Sbjct: 214 APEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 98/199 (49%), Gaps = 15/199 (7%)
Query: 213 IGTGGYGSVYKA-QLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYC 271
IG G G+VY A + G+ A+++++ ++ + NE V+ + + NIV
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQ-PKKELIINEILVMRENKNPNIVNYLDSY 86
Query: 272 LHKKCMFLIYEYMERGSLFCNLHNNEDAVE---LDWAKRVNIVKAMAHALAYLHHDCSPS 328
L ++++ EY+ GSL D V +D + + + AL +LH S
Sbjct: 87 LVGDELWVVMEYLAGGSL-------TDVVTETCMDEGQIAAVCRECLQALEFLH---SNQ 136
Query: 329 IIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYTMVMTEK 388
+IHRDI S+NILL + DFG + + S R+ + GT ++APE+ K
Sbjct: 137 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPK 196
Query: 389 CDVYSFGVVTLEVLMGKHP 407
D++S G++ +E++ G+ P
Sbjct: 197 VDIWSLGIMAIEMIEGEPP 215
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 98/199 (49%), Gaps = 15/199 (7%)
Query: 213 IGTGGYGSVYKA-QLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYC 271
IG G G+VY A + G+ A+++++ ++ + NE V+ + + NIV
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQ-PKKELIINEILVMRENKNPNIVNYLDSY 87
Query: 272 LHKKCMFLIYEYMERGSLFCNLHNNEDAVE---LDWAKRVNIVKAMAHALAYLHHDCSPS 328
L ++++ EY+ GSL D V +D + + + AL +LH S
Sbjct: 88 LVGDELWVVMEYLAGGSL-------TDVVTETCMDEGQIAAVCRECLQALEFLH---SNQ 137
Query: 329 IIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYTMVMTEK 388
+IHRDI S+NILL + DFG + + S R+ + GT ++APE+ K
Sbjct: 138 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPK 197
Query: 389 CDVYSFGVVTLEVLMGKHP 407
D++S G++ +E++ G+ P
Sbjct: 198 VDIWSLGIMAIEMIEGEPP 216
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 98/199 (49%), Gaps = 15/199 (7%)
Query: 213 IGTGGYGSVYKA-QLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYC 271
IG G G+VY A + G+ A+++++ ++ + NE V+ + + NIV
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQ-PKKELIINEILVMRENKNPNIVNYLDSY 86
Query: 272 LHKKCMFLIYEYMERGSLFCNLHNNEDAVE---LDWAKRVNIVKAMAHALAYLHHDCSPS 328
L ++++ EY+ GSL D V +D + + + AL +LH S
Sbjct: 87 LVGDELWVVMEYLAGGSL-------TDVVTETCMDEGQIAAVCRECLQALEFLH---SNQ 136
Query: 329 IIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYTMVMTEK 388
+IHRDI S+NILL + DFG + + S R+ + GT ++APE+ K
Sbjct: 137 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPK 196
Query: 389 CDVYSFGVVTLEVLMGKHP 407
D++S G++ +E++ G+ P
Sbjct: 197 VDIWSLGIMAIEMIEGEPP 215
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 101/216 (46%), Gaps = 22/216 (10%)
Query: 205 EDFDIRYCIGTGGYGSVYKAQLPNG-KVFALKKLHTSEEL--AFIKSFKNEAQVLSQVLH 261
EDF+I IG G +G V +L N KVFA+K L+ E L A F+ E VL
Sbjct: 74 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDS 133
Query: 262 RNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAK----RVNIVKAMAHA 317
+ I L+ ++L+ +Y G L L ED + + A+ + I H
Sbjct: 134 KWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQ 193
Query: 318 LAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLA-GTYGYIA 376
L Y +HRDI +NIL++ +ADFG+ L D + ++ +A GT YI+
Sbjct: 194 LHY---------VHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYIS 244
Query: 377 PELAYTMVMTE-----KCDVYSFGVVTLEVLMGKHP 407
PE+ M + +CD +S GV E+L G+ P
Sbjct: 245 PEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETP 280
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 105/212 (49%), Gaps = 32/212 (15%)
Query: 212 CIGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVL--HRNIVKLYG 269
C+G G YG V++ G+ A+K + +E KS+ E ++ + V+ H NI+
Sbjct: 15 CVGKGRYGEVWRGSW-QGENVAVKIFSSRDE----KSWFRETELYNTVMLRHENILGFIA 69
Query: 270 YCLHKK----CMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDC 325
+ + ++LI Y E GSL+ L LD + IV ++A LA+LH +
Sbjct: 70 SDMTSRHSSTQLWLITHYHEMGSLYDYLQ----LTTLDTVSCLRIVLSIASGLAHLHIEI 125
Query: 326 -----SPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLA-----GTYGYI 375
P+I HRD+ S NIL+ + +AD G A ++H+ S+N+ + GT Y+
Sbjct: 126 FGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA-VMHSQSTNQLDVGNNPRVGTKRYM 184
Query: 376 APELAYTMVMTE------KCDVYSFGVVTLEV 401
APE+ + + + D+++FG+V EV
Sbjct: 185 APEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 133/293 (45%), Gaps = 37/293 (12%)
Query: 205 EDFDIRYCIGTGGYGSVYKAQ----LPNGKVFALKKL------HTSEELAFIKSFKNEAQ 254
E F++ +G GGYG V++ + GK+FA+K L +++ A K+ +N
Sbjct: 17 ECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERN--- 73
Query: 255 VLSQVLHRNIVKL-YGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKA 313
+L +V H IV L Y + K ++LI EY+ G LF L +E D A +
Sbjct: 74 ILEEVKHPFIVDLIYAFQTGGK-LYLILEYLSGGELFMQLEREGIFME-DTA--CFYLAE 129
Query: 314 MAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYG 373
++ AL +LH II+RD+ NI+LN + + DFG + D + GT
Sbjct: 130 ISMALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXFCGTIE 186
Query: 374 YIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDIXXXXXXXXDPKIMLIDVLDQRLP 433
Y+APE+ D +S G + ++L G P + K + +L +L
Sbjct: 187 YMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPP-------FTGENRKKTIDKILKCKLN 239
Query: 434 -PPVDRKVIRDIL--LISTVSFACLQSNP------KSRPTMQSVSQEFLITRK 477
PP + RD+L L+ + + L + P ++ P + ++ E L+ RK
Sbjct: 240 LPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRHINWEELLARK 292
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 98/201 (48%), Gaps = 18/201 (8%)
Query: 213 IGTGGYGSVYKA-----QLPNGKVFALKKL-HTSEELAFIKSFKNEAQVLSQVLHRNIVK 266
+G G +GSV Q G+V A+KKL H++EE ++ F+ E ++L + H NIVK
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE--HLRDFEREIEILKSLQHDNIVK 73
Query: 267 LYGYCLH--KKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHD 324
G C ++ + LI EY+ GSL L +++ + D K + + + YL
Sbjct: 74 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI--DHIKLLQYTSQICKGMEYL--- 128
Query: 325 CSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYG---YIAPELAY 381
+ IHRD+++ NIL+ ++ + DFG ++L D + + APE
Sbjct: 129 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 188
Query: 382 TMVMTEKCDVYSFGVVTLEVL 402
+ DV+SFGVV E+
Sbjct: 189 ESKFSVASDVWSFGVVLYELF 209
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 98/199 (49%), Gaps = 15/199 (7%)
Query: 213 IGTGGYGSVYKA-QLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYC 271
IG G G+VY A + G+ A+++++ ++ + NE V+ + + NIV
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQ-PKKELIINEILVMRENKNPNIVNYLDSY 86
Query: 272 LHKKCMFLIYEYMERGSLFCNLHNNEDAVE---LDWAKRVNIVKAMAHALAYLHHDCSPS 328
L ++++ EY+ GSL D V +D + + + AL +LH S
Sbjct: 87 LVGDELWVVMEYLAGGSL-------TDVVTETCMDEGQIAAVCRECLQALEFLH---SNQ 136
Query: 329 IIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYTMVMTEK 388
+IHRDI S+NILL + DFG + + S R+ + GT ++APE+ K
Sbjct: 137 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVVTRKAYGPK 196
Query: 389 CDVYSFGVVTLEVLMGKHP 407
D++S G++ +E++ G+ P
Sbjct: 197 VDIWSLGIMAIEMIEGEPP 215
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 98/201 (48%), Gaps = 18/201 (8%)
Query: 213 IGTGGYGSVYKA-----QLPNGKVFALKKL-HTSEELAFIKSFKNEAQVLSQVLHRNIVK 266
+G G +GSV Q G+V A+KKL H++EE ++ F+ E ++L + H NIVK
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE--HLRDFEREIEILKSLQHDNIVK 79
Query: 267 LYGYCLH--KKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHD 324
G C ++ + LI EY+ GSL L +++ + D K + + + YL
Sbjct: 80 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI--DHIKLLQYTSQICKGMEYL--- 134
Query: 325 CSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYG---YIAPELAY 381
+ IHRD+++ NIL+ ++ + DFG ++L D + + APE
Sbjct: 135 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 194
Query: 382 TMVMTEKCDVYSFGVVTLEVL 402
+ DV+SFGVV E+
Sbjct: 195 ESKFSVASDVWSFGVVLYELF 215
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 97/202 (48%), Gaps = 15/202 (7%)
Query: 213 IGTGGYGSVYKAQLPNGKVFALKKLHT---SEELAFIKSFKNEAQVLSQVLHRNIVKLYG 269
IG+G +G V+ N A+K + SEE F EA+V+ ++ H +V+LYG
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEE-----DFIEEAEVMMKLSHPKLVQLYG 69
Query: 270 YCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSI 329
CL + + L++E+ME G L L + + + + +AYL S+
Sbjct: 70 VCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAE--TLLGMCLDVCEGMAYLEE---ASV 124
Query: 330 IHRDISSNNILLNSKLEAFVADFGTARLLHADS-SNRTLLAGTYGYIAPELAYTMVMTEK 388
IHRD+++ N L+ V+DFG R + D ++ T + +PE+ + K
Sbjct: 125 IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSK 184
Query: 389 CDVYSFGVVTLEVLM-GKHPRD 409
DV+SFGV+ EV GK P +
Sbjct: 185 SDVWSFGVLMWEVFSEGKIPYE 206
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 133/293 (45%), Gaps = 37/293 (12%)
Query: 205 EDFDIRYCIGTGGYGSVYKAQ----LPNGKVFALKKL------HTSEELAFIKSFKNEAQ 254
E F++ +G GGYG V++ + GK+FA+K L +++ A K+ +N
Sbjct: 17 ECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERN--- 73
Query: 255 VLSQVLHRNIVKL-YGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKA 313
+L +V H IV L Y + K ++LI EY+ G LF L +E D A +
Sbjct: 74 ILEEVKHPFIVDLIYAFQTGGK-LYLILEYLSGGELFMQLEREGIFME-DTA--CFYLAE 129
Query: 314 MAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYG 373
++ AL +LH II+RD+ NI+LN + + DFG + D + GT
Sbjct: 130 ISMALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGTIE 186
Query: 374 YIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDIXXXXXXXXDPKIMLIDVLDQRLP 433
Y+APE+ D +S G + ++L G P + K + +L +L
Sbjct: 187 YMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPP-------FTGENRKKTIDKILKCKLN 239
Query: 434 -PPVDRKVIRDIL--LISTVSFACLQSNP------KSRPTMQSVSQEFLITRK 477
PP + RD+L L+ + + L + P ++ P + ++ E L+ RK
Sbjct: 240 LPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRHINWEELLARK 292
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 95/199 (47%), Gaps = 9/199 (4%)
Query: 213 IGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCL 272
IG+G +G V+ N A+K + E F EA+V+ ++ H +V+LYG CL
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTI--KEGSMSEDDFIEEAEVMMKLSHPKLVQLYGVCL 92
Query: 273 HKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHR 332
+ + L++E+ME G L L + + + + +AYL C +IHR
Sbjct: 93 EQAPICLVFEFMEHGCLSDYLRTQRGLFAAE--TLLGMCLDVCEGMAYLEEAC---VIHR 147
Query: 333 DISSNNILLNSKLEAFVADFGTARLLHADS-SNRTLLAGTYGYIAPELAYTMVMTEKCDV 391
D+++ N L+ V+DFG R + D ++ T + +PE+ + K DV
Sbjct: 148 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDV 207
Query: 392 YSFGVVTLEVLM-GKHPRD 409
+SFGV+ EV GK P +
Sbjct: 208 WSFGVLMWEVFSEGKIPYE 226
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 98/201 (48%), Gaps = 18/201 (8%)
Query: 213 IGTGGYGSVYKA-----QLPNGKVFALKKL-HTSEELAFIKSFKNEAQVLSQVLHRNIVK 266
+G G +GSV Q G+V A+KKL H++EE ++ F+ E ++L + H NIVK
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE--HLRDFEREIEILKSLQHDNIVK 74
Query: 267 LYGYCLH--KKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHD 324
G C ++ + LI EY+ GSL L +++ + D K + + + YL
Sbjct: 75 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI--DHIKLLQYTSQICKGMEYL--- 129
Query: 325 CSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYG---YIAPELAY 381
+ IHRD+++ NIL+ ++ + DFG ++L D + + APE
Sbjct: 130 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 189
Query: 382 TMVMTEKCDVYSFGVVTLEVL 402
+ DV+SFGVV E+
Sbjct: 190 ESKFSVASDVWSFGVVLYELF 210
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 98/201 (48%), Gaps = 18/201 (8%)
Query: 213 IGTGGYGSVYKA-----QLPNGKVFALKKL-HTSEELAFIKSFKNEAQVLSQVLHRNIVK 266
+G G +GSV Q G+V A+KKL H++EE ++ F+ E ++L + H NIVK
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE--HLRDFEREIEILKSLQHDNIVK 75
Query: 267 LYGYCLH--KKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHD 324
G C ++ + LI EY+ GSL L +++ + D K + + + YL
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI--DHIKLLQYTSQICKGMEYL--- 130
Query: 325 CSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYG---YIAPELAY 381
+ IHRD+++ NIL+ ++ + DFG ++L D + + APE
Sbjct: 131 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 190
Query: 382 TMVMTEKCDVYSFGVVTLEVL 402
+ DV+SFGVV E+
Sbjct: 191 ESKFSVASDVWSFGVVLYELF 211
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 98/201 (48%), Gaps = 18/201 (8%)
Query: 213 IGTGGYGSVYKA-----QLPNGKVFALKKL-HTSEELAFIKSFKNEAQVLSQVLHRNIVK 266
+G G +GSV Q G+V A+KKL H++EE ++ F+ E ++L + H NIVK
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE--HLRDFEREIEILKSLQHDNIVK 78
Query: 267 LYGYCLH--KKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHD 324
G C ++ + LI EY+ GSL L +++ + D K + + + YL
Sbjct: 79 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI--DHIKLLQYTSQICKGMEYL--- 133
Query: 325 CSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYG---YIAPELAY 381
+ IHRD+++ NIL+ ++ + DFG ++L D + + APE
Sbjct: 134 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 193
Query: 382 TMVMTEKCDVYSFGVVTLEVL 402
+ DV+SFGVV E+
Sbjct: 194 ESKFSVASDVWSFGVVLYELF 214
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 101/213 (47%), Gaps = 19/213 (8%)
Query: 201 IEATEDFDIRYCIGTGGYGSVYKAQLPN-GKVFALKKLHTSEELAFIKSFK-NEAQVLSQ 258
++ E ++ +G G YG V K + + G++ A+KK S++ +K E ++L Q
Sbjct: 21 FQSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQ 80
Query: 259 VLHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVEL-----DWAKRVNIVKA 313
+ H N+V L C KK +L++E+++ H D +EL D+ +
Sbjct: 81 LRHENLVNLLEVCKKKKRWYLVFEFVD--------HTILDDLELFPNGLDYQVVQKYLFQ 132
Query: 314 MAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYG 373
+ + + + H S +IIHRDI NIL++ + DFG AR L A T
Sbjct: 133 IINGIGFCH---SHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRW 189
Query: 374 YIAPELAYTMVMTEKC-DVYSFGVVTLEVLMGK 405
Y APEL V K DV++ G + E+ MG+
Sbjct: 190 YRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGE 222
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 98/201 (48%), Gaps = 18/201 (8%)
Query: 213 IGTGGYGSVYKA-----QLPNGKVFALKKL-HTSEELAFIKSFKNEAQVLSQVLHRNIVK 266
+G G +GSV Q G+V A+KKL H++EE ++ F+ E ++L + H NIVK
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE--HLRDFEREIEILKSLQHDNIVK 106
Query: 267 LYGYCLH--KKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHD 324
G C ++ + LI EY+ GSL L +++ + D K + + + YL
Sbjct: 107 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI--DHIKLLQYTSQICKGMEYL--- 161
Query: 325 CSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYG---YIAPELAY 381
+ IHRD+++ NIL+ ++ + DFG ++L D + + APE
Sbjct: 162 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 221
Query: 382 TMVMTEKCDVYSFGVVTLEVL 402
+ DV+SFGVV E+
Sbjct: 222 ESKFSVASDVWSFGVVLYELF 242
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 98/201 (48%), Gaps = 18/201 (8%)
Query: 213 IGTGGYGSVYKA-----QLPNGKVFALKKL-HTSEELAFIKSFKNEAQVLSQVLHRNIVK 266
+G G +GSV Q G+V A+KKL H++EE ++ F+ E ++L + H NIVK
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE--HLRDFEREIEILKSLQHDNIVK 75
Query: 267 LYGYCLH--KKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHD 324
G C ++ + LI EY+ GSL L +++ + D K + + + YL
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI--DHIKLLQYTSQICKGMEYL--- 130
Query: 325 CSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYG---YIAPELAY 381
+ IHRD+++ NIL+ ++ + DFG ++L D + + APE
Sbjct: 131 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 190
Query: 382 TMVMTEKCDVYSFGVVTLEVL 402
+ DV+SFGVV E+
Sbjct: 191 ESKFSVASDVWSFGVVLYELF 211
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 99/210 (47%), Gaps = 20/210 (9%)
Query: 205 EDFDIRYCIGTGGYGSVYKAQ-LPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRN 263
+DF+ +G G G V K Q P+G + A K +H + A E QVL +
Sbjct: 16 DDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 75
Query: 264 IVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRV------NIVKAMAHA 317
IV YG + + E+M+ GSL D V L AKR+ + A+
Sbjct: 76 IVGFYGAFYSDGEISICMEHMDGGSL--------DQV-LKEAKRIPEEILGKVSIAVLRG 126
Query: 318 LAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAP 377
LAYL I+HRD+ +NIL+NS+ E + DFG + L +N GT Y+AP
Sbjct: 127 LAYLREKHQ--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS--FVGTRSYMAP 182
Query: 378 ELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
E + + D++S G+ +E+ +G++P
Sbjct: 183 ERLQGTHYSVQSDIWSMGLSLVELAVGRYP 212
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 98/201 (48%), Gaps = 18/201 (8%)
Query: 213 IGTGGYGSVYKA-----QLPNGKVFALKKL-HTSEELAFIKSFKNEAQVLSQVLHRNIVK 266
+G G +GSV Q G+V A+KKL H++EE ++ F+ E ++L + H NIVK
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE--HLRDFEREIEILKSLQHDNIVK 80
Query: 267 LYGYCLH--KKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHD 324
G C ++ + LI EY+ GSL L +++ + D K + + + YL
Sbjct: 81 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI--DHIKLLQYTSQICKGMEYL--- 135
Query: 325 CSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYG---YIAPELAY 381
+ IHRD+++ NIL+ ++ + DFG ++L D + + APE
Sbjct: 136 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 195
Query: 382 TMVMTEKCDVYSFGVVTLEVL 402
+ DV+SFGVV E+
Sbjct: 196 ESKFSVASDVWSFGVVLYELF 216
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 96/202 (47%), Gaps = 15/202 (7%)
Query: 213 IGTGGYGSVYKAQLPNGKVFALKKLHT---SEELAFIKSFKNEAQVLSQVLHRNIVKLYG 269
IG+G +G V+ N A+K + SEE F EA+V+ ++ H +V+LYG
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEE-----DFIEEAEVMMKLSHPKLVQLYG 70
Query: 270 YCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSI 329
CL + + L+ E+ME G L L + + + + +AYL C +
Sbjct: 71 VCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAE--TLLGMCLDVCEGMAYLEEAC---V 125
Query: 330 IHRDISSNNILLNSKLEAFVADFGTARLLHADS-SNRTLLAGTYGYIAPELAYTMVMTEK 388
IHRD+++ N L+ V+DFG R + D ++ T + +PE+ + K
Sbjct: 126 IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSK 185
Query: 389 CDVYSFGVVTLEVLM-GKHPRD 409
DV+SFGV+ EV GK P +
Sbjct: 186 SDVWSFGVLMWEVFSEGKIPYE 207
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 98/201 (48%), Gaps = 18/201 (8%)
Query: 213 IGTGGYGSVYKA-----QLPNGKVFALKKL-HTSEELAFIKSFKNEAQVLSQVLHRNIVK 266
+G G +GSV Q G+V A+KKL H++EE ++ F+ E ++L + H NIVK
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE--HLRDFEREIEILKSLQHDNIVK 82
Query: 267 LYGYCLH--KKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHD 324
G C ++ + LI EY+ GSL L +++ + D K + + + YL
Sbjct: 83 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI--DHIKLLQYTSQICKGMEYL--- 137
Query: 325 CSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYG---YIAPELAY 381
+ IHRD+++ NIL+ ++ + DFG ++L D + + APE
Sbjct: 138 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 197
Query: 382 TMVMTEKCDVYSFGVVTLEVL 402
+ DV+SFGVV E+
Sbjct: 198 ESKFSVASDVWSFGVVLYELF 218
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 98/201 (48%), Gaps = 18/201 (8%)
Query: 213 IGTGGYGSVYKA-----QLPNGKVFALKKL-HTSEELAFIKSFKNEAQVLSQVLHRNIVK 266
+G G +GSV Q G+V A+KKL H++EE ++ F+ E ++L + H NIVK
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE--HLRDFEREIEILKSLQHDNIVK 81
Query: 267 LYGYCLH--KKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHD 324
G C ++ + LI EY+ GSL L +++ + D K + + + YL
Sbjct: 82 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI--DHIKLLQYTSQICKGMEYL--- 136
Query: 325 CSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYG---YIAPELAY 381
+ IHRD+++ NIL+ ++ + DFG ++L D + + APE
Sbjct: 137 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 196
Query: 382 TMVMTEKCDVYSFGVVTLEVL 402
+ DV+SFGVV E+
Sbjct: 197 ESKFSVASDVWSFGVVLYELF 217
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 99/197 (50%), Gaps = 9/197 (4%)
Query: 213 IGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCL 272
+G G +G V+ A+K L +F EA ++ Q+ H+ +V+LY +
Sbjct: 17 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP--DAFLAEANLMKQLQHQRLVRLYA-VV 73
Query: 273 HKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHR 332
++ +++I EYME GSL + ++L K +++ +A +A++ + IHR
Sbjct: 74 TQEPIYIITEYMENGSL-VDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHR 129
Query: 333 DISSNNILLNSKLEAFVADFGTARLLHADS-SNRTLLAGTYGYIAPELAYTMVMTEKCDV 391
++ + NIL++ L +ADFG ARL+ + + R + APE T K DV
Sbjct: 130 NLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDV 189
Query: 392 YSFGVVTLEVLM-GKHP 407
+SFG++ E++ G+ P
Sbjct: 190 WSFGILLTEIVTHGRIP 206
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 106/227 (46%), Gaps = 38/227 (16%)
Query: 206 DFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKL-HTSEELAFIKSFKNEAQVLSQVLHRN 263
DF+ +G G +G V KA+ + + +A+KK+ HT E+L+ I S E +L+ + H+
Sbjct: 7 DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILS---EVXLLASLNHQY 63
Query: 264 IVKLYGYCLHKK-------------CMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNI 310
+V+ Y L ++ +F+ EY E +L+ +H+ + D R +
Sbjct: 64 VVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWR--L 121
Query: 311 VKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLH----------- 359
+ + AL+Y+H S IIHR++ NI ++ + DFG A+ +H
Sbjct: 122 FRQILEALSYIH---SQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQ 178
Query: 360 ---ADSSNRTLLAGTYGYIAPE-LAYTMVMTEKCDVYSFGVVTLEVL 402
S N T GT Y+A E L T EK D YS G++ E +
Sbjct: 179 NLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 98/201 (48%), Gaps = 18/201 (8%)
Query: 213 IGTGGYGSVYKA-----QLPNGKVFALKKL-HTSEELAFIKSFKNEAQVLSQVLHRNIVK 266
+G G +GSV Q G+V A+KKL H++EE ++ F+ E ++L + H NIVK
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE--HLRDFEREIEILKSLQHDNIVK 93
Query: 267 LYGYCLH--KKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHD 324
G C ++ + LI EY+ GSL L +++ + D K + + + YL
Sbjct: 94 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI--DHIKLLQYTSQICKGMEYL--- 148
Query: 325 CSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYG---YIAPELAY 381
+ IHRD+++ NIL+ ++ + DFG ++L D + + APE
Sbjct: 149 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 208
Query: 382 TMVMTEKCDVYSFGVVTLEVL 402
+ DV+SFGVV E+
Sbjct: 209 ESKFSVASDVWSFGVVLYELF 229
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 98/201 (48%), Gaps = 18/201 (8%)
Query: 213 IGTGGYGSVYKA-----QLPNGKVFALKKL-HTSEELAFIKSFKNEAQVLSQVLHRNIVK 266
+G G +GSV Q G+V A+KKL H++EE ++ F+ E ++L + H NIVK
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE--HLRDFEREIEILKSLQHDNIVK 93
Query: 267 LYGYCLH--KKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHD 324
G C ++ + LI EY+ GSL L +++ + D K + + + YL
Sbjct: 94 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI--DHIKLLQYTSQICKGMEYL--- 148
Query: 325 CSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYG---YIAPELAY 381
+ IHRD+++ NIL+ ++ + DFG ++L D + + APE
Sbjct: 149 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 208
Query: 382 TMVMTEKCDVYSFGVVTLEVL 402
+ DV+SFGVV E+
Sbjct: 209 ESKFSVASDVWSFGVVLYELF 229
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 104/223 (46%), Gaps = 40/223 (17%)
Query: 213 IGTGGYGSVYKAQLPN------GKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVK 266
IG G +G V++A+ P + A+K L F+ EA ++++ + NIVK
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114
Query: 267 LYGYCLHKKCMFLIYEYMERGSL-----------FCNLHNNEDAVE----------LDWA 305
L G C K M L++EYM G L C+L +++ + L A
Sbjct: 115 LLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCA 174
Query: 306 KRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLH------ 359
+++ I + +A +AYL +HRD+++ N L+ + +ADFG +R ++
Sbjct: 175 EQLCIARQVAAGMAYLSER---KFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYK 231
Query: 360 ADSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVL 402
AD ++ A ++ PE + T + DV+++GVV E+
Sbjct: 232 ADGND----AIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIF 270
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 123/277 (44%), Gaps = 16/277 (5%)
Query: 205 EDFDIRYCIGTGGYGSVYK-AQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRN 263
+DF+ +G G G V+K + P+G V A K +H + A E QVL +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 264 IVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHH 323
IV YG + + E+M+ GSL L E K V+I A+ L YL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGK-VSI--AVIKGLTYLRE 122
Query: 324 DCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYTM 383
I+HRD+ +NIL+NS+ E + DFG + L +N GT Y++PE
Sbjct: 123 --KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS--FVGTRSYMSPERLQGT 178
Query: 384 VMTEKCDVYSFGVVTLEVLMGKHPRDIXXXXXXXXDPKIMLIDVLDQRL--PPPVDRKVI 441
+ + D++S G+ +E+ +G++P P + + ++LD + PPP K+
Sbjct: 179 HYSVQSDIWSMGLSLVEMAVGRYPIP-PPDAKEDSRPPMAIFELLDYIVNEPPP---KLP 234
Query: 442 RDILLISTVSFA--CLQSNPKSRPTMQSVSQEFLITR 476
+ + F CL NP R ++ + I R
Sbjct: 235 SGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKR 271
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 97/201 (48%), Gaps = 18/201 (8%)
Query: 213 IGTGGYGSVYKA-----QLPNGKVFALKKL-HTSEELAFIKSFKNEAQVLSQVLHRNIVK 266
+G G +GSV Q G+V A+KKL H++EE ++ F+ E ++L + H NIVK
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE--HLRDFEREIEILKSLQHDNIVK 78
Query: 267 LYGYCLH--KKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHD 324
G C ++ + LI EY+ GSL L + A +D K + + + YL
Sbjct: 79 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAH--AERIDHIKLLQYTSQICKGMEYL--- 133
Query: 325 CSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYG---YIAPELAY 381
+ IHRD+++ NIL+ ++ + DFG ++L D + + APE
Sbjct: 134 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 193
Query: 382 TMVMTEKCDVYSFGVVTLEVL 402
+ DV+SFGVV E+
Sbjct: 194 ESKFSVASDVWSFGVVLYELF 214
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 118/278 (42%), Gaps = 22/278 (7%)
Query: 205 EDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRN 263
ED + IG G +G V+ +L + + A+K + F EA++L Q H N
Sbjct: 114 EDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPN 173
Query: 264 IVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHH 323
IV+L G C K+ ++++ E ++ G L + L + +V A + YL
Sbjct: 174 IVRLIGVCTQKQPIYIVMELVQGGDFLTFLRT--EGARLRVKTLLQMVGDAAAGMEYLES 231
Query: 324 DCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHAD---SSNRTLLAGTYGYIAPELA 380
C IHRD+++ N L+ K ++DFG +R AD +++ L + APE
Sbjct: 232 KC---CIHRDLAARNCLVTEKNVLKISDFGMSR-EEADGVXAASGGLRQVPVKWTAPEAL 287
Query: 381 YTMVMTEKCDVYSFGVVTLEVL-MGKHPRDIXXXXXXXXDPKIMLIDVLDQRLPPPVDRK 439
+ + DV+SFG++ E +G P + + RLP P +
Sbjct: 288 NYGRYSSESDVWSFGILLWETFSLGASP------YPNLSNQQTREFVEKGGRLPCP---E 338
Query: 440 VIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRK 477
+ D + + C P RP+ ++ QE RK
Sbjct: 339 LCPDAVF--RLMEQCWAYEPGQRPSFSTIYQELQSIRK 374
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 93/201 (46%), Gaps = 15/201 (7%)
Query: 213 IGTGGYGSVYK-AQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHR-----NIVK 266
+G GG+ Y+ + +VFA K + S +K + E +H+ ++V
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKS---MLLKPHQKEKMSTEIAIHKSLDNPHVVG 106
Query: 267 LYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCS 326
+G+ ++++ E R SL LH AV A+ ++ + YLH++
Sbjct: 107 FHGFFEDDDFVYVVLEICRRRSLL-ELHKRRKAVTEPEAR--YFMRQTIQGVQYLHNN-- 161
Query: 327 PSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYTMVMT 386
+IHRD+ N+ LN ++ + DFG A + D + L GT YIAPE+ +
Sbjct: 162 -RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXLCGTPNYIAPEVLCKKGHS 220
Query: 387 EKCDVYSFGVVTLEVLMGKHP 407
+ D++S G + +L+GK P
Sbjct: 221 FEVDIWSLGCILYTLLVGKPP 241
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 131/273 (47%), Gaps = 33/273 (12%)
Query: 205 EDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNI 264
E + +G G +G V+ A A+K + +++F EA V+ + H +
Sbjct: 182 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS--MSVEAFLAEANVMKTLQHDKL 239
Query: 265 VKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHD 324
VKL+ + K+ +++I E+M +GSL L ++E + + K ++ +A +A++
Sbjct: 240 VKLHA-VVTKEPIYIITEFMAKGSLLDFLKSDEGSKQ-PLPKLIDFSAQIAEGMAFIEQR 297
Query: 325 CSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYTMV 384
+ IHRD+ + NIL+++ L +ADFG AR+ + APE
Sbjct: 298 ---NYIHRDLRAANILVSASLVCKIADFGLARV---------GAKFPIKWTAPEAINFGS 345
Query: 385 MTEKCDVYSFGVVTLEVLM-GKHPRDIXXXXXXXXDPKIMLIDVLDQRLPPPVD-RKVIR 442
T K DV+SFG++ +E++ G+ P +P+++ R+P P + + +
Sbjct: 346 FTIKSDVWSFGILLMEIVTYGRIP------YPGMSNPEVIRALERGYRMPRPENCPEELY 399
Query: 443 DILLISTVSFACLQSNPKSRPT---MQSVSQEF 472
+I++ C ++ P+ RPT +QSV +F
Sbjct: 400 NIMM------RCWKNRPEERPTFEYIQSVLDDF 426
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 114/258 (44%), Gaps = 24/258 (9%)
Query: 213 IGTGGYGSVYKAQLPNGKVFALK--KLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGY 270
+GTG +G V + A+K K + E FI+ EA+V+ + H +V+LYG
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIE----EAKVMMNLSHEKLVQLYGV 87
Query: 271 CLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSII 330
C ++ +F+I EYM G L L + + + + K + A+ YL S +
Sbjct: 88 CTKQRPIFIITEYMANGCLLNYLREMRHRFQTQ--QLLEMCKDVCEAMEYLE---SKQFL 142
Query: 331 HRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAG-TYGYIAPELAYTMVMTEKC 389
HRD+++ N L+N + V+DFG +R + D ++ + + PE+ + K
Sbjct: 143 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSPPEVLMYSKFSSKS 202
Query: 390 DVYSFGVVTLEVL-MGKHPRDIXXXXXXXXDPKIMLIDVLDQRLPPPVDRKVIRDILLIS 448
D+++FGV+ E+ +GK P + + + L P KV
Sbjct: 203 DIWAFGVLMWEIYSLGKMPYE----RFTNSETAEHIAQGLRLYRPHLASEKVY------- 251
Query: 449 TVSFACLQSNPKSRPTMQ 466
T+ ++C RPT +
Sbjct: 252 TIMYSCWHEKADERPTFK 269
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 118/278 (42%), Gaps = 22/278 (7%)
Query: 205 EDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRN 263
ED + IG G +G V+ +L + + A+K + F EA++L Q H N
Sbjct: 114 EDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPN 173
Query: 264 IVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHH 323
IV+L G C K+ ++++ E ++ G L + L + +V A + YL
Sbjct: 174 IVRLIGVCTQKQPIYIVMELVQGGDFLTFLRT--EGARLRVKTLLQMVGDAAAGMEYLES 231
Query: 324 DCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHAD---SSNRTLLAGTYGYIAPELA 380
C IHRD+++ N L+ K ++DFG +R AD +++ L + APE
Sbjct: 232 KC---CIHRDLAARNCLVTEKNVLKISDFGMSR-EEADGVYAASGGLRQVPVKWTAPEAL 287
Query: 381 YTMVMTEKCDVYSFGVVTLEVL-MGKHPRDIXXXXXXXXDPKIMLIDVLDQRLPPPVDRK 439
+ + DV+SFG++ E +G P + + RLP P +
Sbjct: 288 NYGRYSSESDVWSFGILLWETFSLGASP------YPNLSNQQTREFVEKGGRLPCP---E 338
Query: 440 VIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRK 477
+ D + + C P RP+ ++ QE RK
Sbjct: 339 LCPDAVF--RLMEQCWAYEPGQRPSFSTIYQELQSIRK 374
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 93/201 (46%), Gaps = 15/201 (7%)
Query: 213 IGTGGYGSVYK-AQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHR-----NIVK 266
+G GG+ Y+ + +VFA K + S +K + E +H+ ++V
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKS---MLLKPHQKEKMSTEIAIHKSLDNPHVVG 106
Query: 267 LYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCS 326
+G+ ++++ E R SL LH AV A+ ++ + YLH++
Sbjct: 107 FHGFFEDDDFVYVVLEICRRRSLL-ELHKRRKAVTEPEAR--YFMRQTIQGVQYLHNN-- 161
Query: 327 PSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYTMVMT 386
+IHRD+ N+ LN ++ + DFG A + D + L GT YIAPE+ +
Sbjct: 162 -RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTLCGTPNYIAPEVLCKKGHS 220
Query: 387 EKCDVYSFGVVTLEVLMGKHP 407
+ D++S G + +L+GK P
Sbjct: 221 FEVDIWSLGCILYTLLVGKPP 241
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 93/201 (46%), Gaps = 15/201 (7%)
Query: 213 IGTGGYGSVYK-AQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHR-----NIVK 266
+G GG+ Y+ + +VFA K + S +K + E +H+ ++V
Sbjct: 34 LGKGGFAKCYEITDMDTKEVFAGKVVPKS---MLLKPHQKEKMSTEIAIHKSLDNPHVVG 90
Query: 267 LYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCS 326
+G+ ++++ E R SL LH AV A+ ++ + YLH++
Sbjct: 91 FHGFFEDDDFVYVVLEICRRRSLL-ELHKRRKAVTEPEAR--YFMRQTIQGVQYLHNN-- 145
Query: 327 PSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYTMVMT 386
+IHRD+ N+ LN ++ + DFG A + D + L GT YIAPE+ +
Sbjct: 146 -RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGHS 204
Query: 387 EKCDVYSFGVVTLEVLMGKHP 407
+ D++S G + +L+GK P
Sbjct: 205 FEVDIWSLGCILYTLLVGKPP 225
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 98/199 (49%), Gaps = 15/199 (7%)
Query: 213 IGTGGYGSVYKA-QLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYC 271
IG G G+VY A + G+ A+++++ ++ + NE V+ + + NIV
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQ-PKKELIINEILVMRENKNPNIVNYLDSY 87
Query: 272 LHKKCMFLIYEYMERGSLFCNLHNNEDAVE---LDWAKRVNIVKAMAHALAYLHHDCSPS 328
L ++++ EY+ GSL D V +D + + + AL +LH S
Sbjct: 88 LVGDELWVVMEYLAGGSL-------TDVVTETCMDEGQIAAVCRECLQALEFLH---SNQ 137
Query: 329 IIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYTMVMTEK 388
+IHR+I S+NILL + DFG + + S R+ + GT ++APE+ K
Sbjct: 138 VIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPK 197
Query: 389 CDVYSFGVVTLEVLMGKHP 407
D++S G++ +E++ G+ P
Sbjct: 198 VDIWSLGIMAIEMIEGEPP 216
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 106/220 (48%), Gaps = 31/220 (14%)
Query: 204 TEDFDIRYCIGTGGYGSV----YKAQLPNGKVFALKKLHTSEELAFIKS--FKNEAQVLS 257
ED+D+ IG G +G V +KA + KV+A+K L E + S F E +++
Sbjct: 74 AEDYDVVKVIGRGAFGEVQLVRHKA---SQKVYAMKLLSKFEMIKRSDSAFFWEERDIMA 130
Query: 258 QVLHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHA 317
+V+L+ K ++++ EYM G L NL +N D E WAK + A
Sbjct: 131 FANSPWVVQLFCAFQDDKYLYMVMEYMPGGDL-VNLMSNYDVPE-KWAKFY--TAEVVLA 186
Query: 318 LAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGT------ARLLHADSSNRTLLAGT 371
L +H S +IHRD+ +N+LL+ +ADFGT ++H D++ GT
Sbjct: 187 LDAIH---SMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTA-----VGT 238
Query: 372 YGYIAPELAYTM----VMTEKCDVYSFGVVTLEVLMGKHP 407
YI+PE+ + +CD +S GV E+L+G P
Sbjct: 239 PDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTP 278
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 98/201 (48%), Gaps = 18/201 (8%)
Query: 213 IGTGGYGSVYKA-----QLPNGKVFALKKL-HTSEELAFIKSFKNEAQVLSQVLHRNIVK 266
+G G +GSV Q G+V A+KKL H++EE ++ F+ E ++L + H NIVK
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE--HLRDFEREIEILKSLQHDNIVK 78
Query: 267 LYGYCLH--KKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHD 324
G C ++ + LI E++ GSL L +++ + D K + + + YL
Sbjct: 79 YKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERI--DHIKLLQYTSQICKGMEYL--- 133
Query: 325 CSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYG---YIAPELAY 381
+ IHRD+++ NIL+ ++ + DFG ++L D + + APE
Sbjct: 134 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 193
Query: 382 TMVMTEKCDVYSFGVVTLEVL 402
+ DV+SFGVV E+
Sbjct: 194 ESKFSVASDVWSFGVVLYELF 214
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 93/201 (46%), Gaps = 15/201 (7%)
Query: 213 IGTGGYGSVYK-AQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHR-----NIVK 266
+G GG+ Y+ + +VFA K + S +K + E +H+ ++V
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKS---MLLKPHQKEKMSTEIAIHKSLDNPHVVG 106
Query: 267 LYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCS 326
+G+ ++++ E R SL LH AV A+ ++ + YLH++
Sbjct: 107 FHGFFEDDDFVYVVLEICRRRSLL-ELHKRRKAVTEPEAR--YFMRQTIQGVQYLHNN-- 161
Query: 327 PSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYTMVMT 386
+IHRD+ N+ LN ++ + DFG A + D + L GT YIAPE+ +
Sbjct: 162 -RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGHS 220
Query: 387 EKCDVYSFGVVTLEVLMGKHP 407
+ D++S G + +L+GK P
Sbjct: 221 FEVDIWSLGCILYTLLVGKPP 241
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 114/258 (44%), Gaps = 24/258 (9%)
Query: 213 IGTGGYGSVYKAQLPNGKVFALK--KLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGY 270
+GTG +G V + A+K K + E FI+ EA+V+ + H +V+LYG
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIE----EAKVMMNLSHEKLVQLYGV 87
Query: 271 CLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSII 330
C ++ +F+I EYM G L L + + + + K + A+ YL S +
Sbjct: 88 CTKQRPIFIITEYMANGCLLNYLREMRHRFQTQ--QLLEMCKDVCEAMEYLE---SKQFL 142
Query: 331 HRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAG-TYGYIAPELAYTMVMTEKC 389
HRD+++ N L+N + V+DFG +R + D ++ + + PE+ + K
Sbjct: 143 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKS 202
Query: 390 DVYSFGVVTLEVL-MGKHPRDIXXXXXXXXDPKIMLIDVLDQRLPPPVDRKVIRDILLIS 448
D+++FGV+ E+ +GK P + + + L P KV
Sbjct: 203 DIWAFGVLMWEIYSLGKMPYE----RFTNSETAEHIAQGLRLYRPHLASEKVY------- 251
Query: 449 TVSFACLQSNPKSRPTMQ 466
T+ ++C RPT +
Sbjct: 252 TIMYSCWHEKADERPTFK 269
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 98/201 (48%), Gaps = 18/201 (8%)
Query: 213 IGTGGYGSVYKA-----QLPNGKVFALKKL-HTSEELAFIKSFKNEAQVLSQVLHRNIVK 266
+G G +GSV Q G+V A+KKL H++EE ++ F+ E ++L + H NIVK
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE--HLRDFEREIEILKSLQHDNIVK 75
Query: 267 LYGYCLH--KKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHD 324
G C ++ + LI EY+ GSL L +++ + D K + + + YL
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI--DHIKLLQYTSQICKGMEYL--- 130
Query: 325 CSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYG---YIAPELAY 381
+ IHRD+++ NIL+ ++ + DFG ++L D + + APE
Sbjct: 131 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLT 190
Query: 382 TMVMTEKCDVYSFGVVTLEVL 402
+ DV+SFGVV E+
Sbjct: 191 ESKFSVASDVWSFGVVLYELF 211
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 114/258 (44%), Gaps = 24/258 (9%)
Query: 213 IGTGGYGSVYKAQLPNGKVFALK--KLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGY 270
+GTG +G V + A+K K + E FI+ EA+V+ + H +V+LYG
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIE----EAKVMMNLSHEKLVQLYGV 71
Query: 271 CLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSII 330
C ++ +F+I EYM G L L + + + + K + A+ YL S +
Sbjct: 72 CTKQRPIFIITEYMANGCLLNYLREMRHRFQTQ--QLLEMCKDVCEAMEYLE---SKQFL 126
Query: 331 HRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGT-YGYIAPELAYTMVMTEKC 389
HRD+++ N L+N + V+DFG +R + D ++ + + PE+ + K
Sbjct: 127 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKS 186
Query: 390 DVYSFGVVTLEVL-MGKHPRDIXXXXXXXXDPKIMLIDVLDQRLPPPVDRKVIRDILLIS 448
D+++FGV+ E+ +GK P + + + L P KV
Sbjct: 187 DIWAFGVLMWEIYSLGKMPYE----RFTNSETAEHIAQGLRLYRPHLASEKVY------- 235
Query: 449 TVSFACLQSNPKSRPTMQ 466
T+ ++C RPT +
Sbjct: 236 TIMYSCWHEKADERPTFK 253
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 114/258 (44%), Gaps = 24/258 (9%)
Query: 213 IGTGGYGSVYKAQLPNGKVFALK--KLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGY 270
+GTG +G V + A+K K + E FI+ EA+V+ + H +V+LYG
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIE----EAKVMMNLSHEKLVQLYGV 72
Query: 271 CLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSII 330
C ++ +F+I EYM G L L + + + + K + A+ YL S +
Sbjct: 73 CTKQRPIFIITEYMANGCLLNYLREMRHRFQTQ--QLLEMCKDVCEAMEYLE---SKQFL 127
Query: 331 HRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGT-YGYIAPELAYTMVMTEKC 389
HRD+++ N L+N + V+DFG +R + D ++ + + PE+ + K
Sbjct: 128 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKS 187
Query: 390 DVYSFGVVTLEVL-MGKHPRDIXXXXXXXXDPKIMLIDVLDQRLPPPVDRKVIRDILLIS 448
D+++FGV+ E+ +GK P + + + L P KV
Sbjct: 188 DIWAFGVLMWEIYSLGKMPYE----RFTNSETAEHIAQGLRLYRPHLASEKVY------- 236
Query: 449 TVSFACLQSNPKSRPTMQ 466
T+ ++C RPT +
Sbjct: 237 TIMYSCWHEKADERPTFK 254
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 114/258 (44%), Gaps = 24/258 (9%)
Query: 213 IGTGGYGSVYKAQLPNGKVFALK--KLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGY 270
+GTG +G V + A+K K + E FI+ EA+V+ + H +V+LYG
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIE----EAKVMMNLSHEKLVQLYGV 78
Query: 271 CLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSII 330
C ++ +F+I EYM G L L + + + + K + A+ YL S +
Sbjct: 79 CTKQRPIFIITEYMANGCLLNYLREMRHRFQTQ--QLLEMCKDVCEAMEYLE---SKQFL 133
Query: 331 HRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGT-YGYIAPELAYTMVMTEKC 389
HRD+++ N L+N + V+DFG +R + D ++ + + PE+ + K
Sbjct: 134 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKS 193
Query: 390 DVYSFGVVTLEVL-MGKHPRDIXXXXXXXXDPKIMLIDVLDQRLPPPVDRKVIRDILLIS 448
D+++FGV+ E+ +GK P + + + L P KV
Sbjct: 194 DIWAFGVLMWEIYSLGKMPYE----RFTNSETAEHIAQGLRLYRPHLASEKVY------- 242
Query: 449 TVSFACLQSNPKSRPTMQ 466
T+ ++C RPT +
Sbjct: 243 TIMYSCWHEKADERPTFK 260
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 103/218 (47%), Gaps = 24/218 (11%)
Query: 205 EDFDIRYCIGTGGYGSVYKAQLPN-GKVFALKKLHTSEEL--AFIKSFKNEAQVLSQVLH 261
+DF+I IG G + V ++ G+V+A+K ++ + L + F+ E VL
Sbjct: 61 DDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDR 120
Query: 262 RNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAK--RVNIVKAM--AHA 317
R I +L+ + ++L+ EY G L L + + + A+ IV A+ H
Sbjct: 121 RWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHR 180
Query: 318 LAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLA-GTYGYIA 376
L Y +HRDI +NILL+ +ADFG+ L AD + R+L+A GT Y++
Sbjct: 181 LGY---------VHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLS 231
Query: 377 PELAYTMVMTE-------KCDVYSFGVVTLEVLMGKHP 407
PE+ + +CD ++ GV E+ G+ P
Sbjct: 232 PEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTP 269
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 114/258 (44%), Gaps = 24/258 (9%)
Query: 213 IGTGGYGSVYKAQLPNGKVFALK--KLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGY 270
+GTG +G V + A+K K + E FI+ EA+V+ + H +V+LYG
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIE----EAKVMMNLSHEKLVQLYGV 67
Query: 271 CLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSII 330
C ++ +F+I EYM G L L + + + + K + A+ YL S +
Sbjct: 68 CTKQRPIFIITEYMANGCLLNYLREMRHRFQTQ--QLLEMCKDVCEAMEYLE---SKQFL 122
Query: 331 HRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGT-YGYIAPELAYTMVMTEKC 389
HRD+++ N L+N + V+DFG +R + D ++ + + PE+ + K
Sbjct: 123 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKS 182
Query: 390 DVYSFGVVTLEVL-MGKHPRDIXXXXXXXXDPKIMLIDVLDQRLPPPVDRKVIRDILLIS 448
D+++FGV+ E+ +GK P + + + L P KV
Sbjct: 183 DIWAFGVLMWEIYSLGKMPYE----RFTNSETAEHIAQGLRLYRPHLASEKVY------- 231
Query: 449 TVSFACLQSNPKSRPTMQ 466
T+ ++C RPT +
Sbjct: 232 TIMYSCWHEKADERPTFK 249
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 124/279 (44%), Gaps = 39/279 (13%)
Query: 201 IEATEDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVL 260
++ E ++I +G G +G VYKA+ A K+ ++ ++ + E ++L+
Sbjct: 7 LDPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCD 66
Query: 261 HRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVN------IVKAM 314
H IVKL G H ++++ E+ G++ DA+ L+ + + + + M
Sbjct: 67 HPYIVKLLGAYYHDGKLWIMIEFCPGGAV--------DAIMLELDRGLTEPQIQVVCRQM 118
Query: 315 AHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGY 374
AL +LH S IIHRD+ + N+L+ + + +ADFG + R GT +
Sbjct: 119 LEALNFLH---SKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYW 175
Query: 375 IAPELAYTMVMTE-----KCDVYSFGVVTLEVLMGKHPRDIXXXXXXXXDPKIMLIDVLD 429
+APE+ M + K D++S G+ +E+ + P +P +L+ +
Sbjct: 176 MAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPH-------HELNPMRVLLKIAK 228
Query: 430 QRLP----PPVDRKVIRDILLISTVSFACLQSNPKSRPT 464
P P RD L I+ L NP++RP+
Sbjct: 229 SDPPTLLTPSKWSVEFRDFLKIA------LDKNPETRPS 261
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 127/282 (45%), Gaps = 39/282 (13%)
Query: 213 IGTGGYGSVYKA-QLPNGKVF----ALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKL 267
+G+G +G+VYK +P G+ A+K+L + K +EA V++ V + ++ +L
Sbjct: 27 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 86
Query: 268 YGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVE----LDWAKRVNIVKAMAHALAYLHH 323
G CL LI + M G L + ++D + L+W V I K M YL
Sbjct: 87 LGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGMN----YLED 139
Query: 324 DCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTY--GYIAPELAY 381
++HRD+++ N+L+ + + DFG A+LL A+ G ++A E
Sbjct: 140 R---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESIL 196
Query: 382 TMVMTEKCDVYSFGVVTLEVL-MGKHPRDIXXXXXXXXDPKIMLIDVLD--QRLP-PPVD 437
+ T + DV+S+GV E++ G P D P + +L+ +RLP PP+
Sbjct: 197 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGI--------PASEISSILEKGERLPQPPI- 247
Query: 438 RKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTP 479
D+ +I C + SRP + + EF + P
Sbjct: 248 --CTIDVYMIMV---KCWMIDADSRPKFRELIIEFSKMARDP 284
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 123/278 (44%), Gaps = 31/278 (11%)
Query: 213 IGTGGYGSVYKA-QLPNGK----VFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKL 267
+G+G +G+VYK +P+G+ A+K L + K +EA V++ V + +L
Sbjct: 25 LGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSRL 84
Query: 268 YGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSP 327
G CL L+ + M G L H E+ L +N +A ++YL
Sbjct: 85 LGICLTSTVQ-LVTQLMPYGCLLD--HVRENRGRLGSQDLLNWCMQIAKGMSYLE---DV 138
Query: 328 SIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTY--GYIAPELAYTMVM 385
++HRD+++ N+L+ S + DFG ARLL D + G ++A E
Sbjct: 139 RLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILRRRF 198
Query: 386 TEKCDVYSFGVVTLEVL-MGKHPRDIXXXXXXXXDPKIMLIDVLD--QRLP-PPVDRKVI 441
T + DV+S+GV E++ G P D P + D+L+ +RLP PP+
Sbjct: 199 THQSDVWSYGVTVWELMTFGAKPYDGI--------PAREIPDLLEKGERLPQPPI---CT 247
Query: 442 RDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTP 479
D+ +I C + + RP + + EF + P
Sbjct: 248 IDVYMIMV---KCWMIDSECRPRFRELVSEFSRMARDP 282
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 127/282 (45%), Gaps = 39/282 (13%)
Query: 213 IGTGGYGSVYKA-QLPNGKVF----ALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKL 267
+G+G +G+VYK +P G+ A+K+L + K +EA V++ V + ++ +L
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 268 YGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVE----LDWAKRVNIVKAMAHALAYLHH 323
G CL LI + M G L + ++D + L+W V I K M YL
Sbjct: 85 LGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGMN----YLED 137
Query: 324 DCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTY--GYIAPELAY 381
++HRD+++ N+L+ + + DFG A+LL A+ G ++A E
Sbjct: 138 R---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESIL 194
Query: 382 TMVMTEKCDVYSFGVVTLEVL-MGKHPRDIXXXXXXXXDPKIMLIDVLD--QRLP-PPVD 437
+ T + DV+S+GV E++ G P D P + +L+ +RLP PP+
Sbjct: 195 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGI--------PASEISSILEKGERLPQPPI- 245
Query: 438 RKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTP 479
D+ +I C + SRP + + EF + P
Sbjct: 246 --CTIDVYMIMV---KCWMIDADSRPKFRELIIEFSKMARDP 282
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 127/282 (45%), Gaps = 39/282 (13%)
Query: 213 IGTGGYGSVYKA-QLPNGKVF----ALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKL 267
+G+G +G+VYK +P G+ A+K+L + K +EA V++ V + ++ +L
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 268 YGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVE----LDWAKRVNIVKAMAHALAYLHH 323
G CL LI + M G L + ++D + L+W V I K M YL
Sbjct: 86 LGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGMN----YLED 138
Query: 324 DCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTY--GYIAPELAY 381
++HRD+++ N+L+ + + DFG A+LL A+ G ++A E
Sbjct: 139 R---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 195
Query: 382 TMVMTEKCDVYSFGVVTLEVL-MGKHPRDIXXXXXXXXDPKIMLIDVLD--QRLP-PPVD 437
+ T + DV+S+GV E++ G P D P + +L+ +RLP PP+
Sbjct: 196 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGI--------PASEISSILEKGERLPQPPI- 246
Query: 438 RKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTP 479
D+ +I C + SRP + + EF + P
Sbjct: 247 --CTIDVYMIMV---KCWMIDADSRPKFRELIIEFSKMARDP 283
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 127/282 (45%), Gaps = 39/282 (13%)
Query: 213 IGTGGYGSVYKA-QLPNGKVF----ALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKL 267
+G+G +G+VYK +P G+ A+K+L + K +EA V++ V + ++ +L
Sbjct: 24 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 83
Query: 268 YGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVE----LDWAKRVNIVKAMAHALAYLHH 323
G CL LI + M G L + ++D + L+W V I K M YL
Sbjct: 84 LGICLTSTVQ-LIMQLMPFGXLLDYVREHKDNIGSQYLLNWC--VQIAKGMN----YLED 136
Query: 324 DCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTY--GYIAPELAY 381
++HRD+++ N+L+ + + DFG A+LL A+ G ++A E
Sbjct: 137 R---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 193
Query: 382 TMVMTEKCDVYSFGVVTLEVL-MGKHPRDIXXXXXXXXDPKIMLIDVLD--QRLP-PPVD 437
+ T + DV+S+GV E++ G P D P + +L+ +RLP PP+
Sbjct: 194 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGI--------PASEISSILEKGERLPQPPI- 244
Query: 438 RKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTP 479
D+ +I C + SRP + + EF + P
Sbjct: 245 --CTIDVYMIMV---KCWMIDADSRPKFRELIIEFSKMARDP 281
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 127/282 (45%), Gaps = 39/282 (13%)
Query: 213 IGTGGYGSVYKA-QLPNGKVF----ALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKL 267
+G+G +G+VYK +P G+ A+K+L + K +EA V++ V + ++ +L
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 268 YGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVE----LDWAKRVNIVKAMAHALAYLHH 323
G CL LI + M G L + ++D + L+W V I K M YL
Sbjct: 85 LGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGMN----YLED 137
Query: 324 DCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTY--GYIAPELAY 381
++HRD+++ N+L+ + + DFG A+LL A+ G ++A E
Sbjct: 138 R---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 194
Query: 382 TMVMTEKCDVYSFGVVTLEVL-MGKHPRDIXXXXXXXXDPKIMLIDVLD--QRLP-PPVD 437
+ T + DV+S+GV E++ G P D P + +L+ +RLP PP+
Sbjct: 195 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGI--------PASEISSILEKGERLPQPPI- 245
Query: 438 RKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTP 479
D+ +I C + SRP + + EF + P
Sbjct: 246 --CTIDVYMIMV---KCWMIDADSRPKFRELIIEFSKMARDP 282
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 97/207 (46%), Gaps = 10/207 (4%)
Query: 205 EDFDIRYCIGTGGYGSVYKAQLPN-GKVFALKKLHTSEELAF--IKSFKNEAQVLSQVL- 260
EDF++ +G G +G V+ A+ + FA+K L L ++ E +VLS
Sbjct: 18 EDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWE 77
Query: 261 HRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAY 320
H + ++ K+ +F + EY+ G L +++ + + D ++ + L +
Sbjct: 78 HPFLTHMFCTFQTKENLFFVMEYLNGGDL---MYHIQSCHKFDLSRATFYAAEIILGLQF 134
Query: 321 LHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELA 380
LH S I++RD+ +NILL+ +ADFG + + GT YIAPE+
Sbjct: 135 LH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFCGTPDYIAPEIL 191
Query: 381 YTMVMTEKCDVYSFGVVTLEVLMGKHP 407
D +SFGV+ E+L+G+ P
Sbjct: 192 LGQKYNHSVDWWSFGVLLYEMLIGQSP 218
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 127/282 (45%), Gaps = 39/282 (13%)
Query: 213 IGTGGYGSVYKA-QLPNGKVF----ALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKL 267
+G+G +G+VYK +P G+ A+K+L + K +EA V++ V + ++ +L
Sbjct: 27 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 86
Query: 268 YGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVE----LDWAKRVNIVKAMAHALAYLHH 323
G CL LI + M G L + ++D + L+W V I K M YL
Sbjct: 87 LGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGMN----YLED 139
Query: 324 DCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTY--GYIAPELAY 381
++HRD+++ N+L+ + + DFG A+LL A+ G ++A E
Sbjct: 140 R---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 196
Query: 382 TMVMTEKCDVYSFGVVTLEVL-MGKHPRDIXXXXXXXXDPKIMLIDVLD--QRLP-PPVD 437
+ T + DV+S+GV E++ G P D P + +L+ +RLP PP+
Sbjct: 197 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGI--------PASEISSILEKGERLPQPPI- 247
Query: 438 RKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTP 479
D+ +I C + SRP + + EF + P
Sbjct: 248 --CTIDVYMIMV---KCWMIDADSRPKFRELIIEFSKMARDP 284
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 127/282 (45%), Gaps = 39/282 (13%)
Query: 213 IGTGGYGSVYKA-QLPNGKVF----ALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKL 267
+G+G +G+VYK +P G+ A+K+L + K +EA V++ V + ++ +L
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 268 YGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVE----LDWAKRVNIVKAMAHALAYLHH 323
G CL LI + M G L + ++D + L+W V I K M YL
Sbjct: 83 LGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGMN----YLE- 134
Query: 324 DCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTY--GYIAPELAY 381
++HRD+++ N+L+ + + DFG A+LL A+ G ++A E
Sbjct: 135 --DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 192
Query: 382 TMVMTEKCDVYSFGVVTLEVL-MGKHPRDIXXXXXXXXDPKIMLIDVLD--QRLP-PPVD 437
+ T + DV+S+GV E++ G P D P + +L+ +RLP PP+
Sbjct: 193 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGI--------PASEISSILEKGERLPQPPI- 243
Query: 438 RKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTP 479
D+ +I C + SRP + + EF + P
Sbjct: 244 --CTIDVYMIMV---KCWMIDADSRPKFRELIIEFSKMARDP 280
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 127/282 (45%), Gaps = 39/282 (13%)
Query: 213 IGTGGYGSVYKA-QLPNGKVF----ALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKL 267
+G+G +G+VYK +P G+ A+K+L + K +EA V++ V + ++ +L
Sbjct: 24 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 83
Query: 268 YGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVE----LDWAKRVNIVKAMAHALAYLHH 323
G CL LI + M G L + ++D + L+W V I K M YL
Sbjct: 84 LGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGMN----YLED 136
Query: 324 DCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTY--GYIAPELAY 381
++HRD+++ N+L+ + + DFG A+LL A+ G ++A E
Sbjct: 137 R---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 193
Query: 382 TMVMTEKCDVYSFGVVTLEVL-MGKHPRDIXXXXXXXXDPKIMLIDVLD--QRLP-PPVD 437
+ T + DV+S+GV E++ G P D P + +L+ +RLP PP+
Sbjct: 194 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGI--------PASEISSILEKGERLPQPPI- 244
Query: 438 RKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTP 479
D+ +I C + SRP + + EF + P
Sbjct: 245 --CTIDVYMIMV---KCWMIDADSRPKFRELIIEFSKMARDP 281
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 127/282 (45%), Gaps = 39/282 (13%)
Query: 213 IGTGGYGSVYKA-QLPNGKVF----ALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKL 267
+G+G +G+VYK +P G+ A+K+L + K +EA V++ V + ++ +L
Sbjct: 30 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 89
Query: 268 YGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVE----LDWAKRVNIVKAMAHALAYLHH 323
G CL LI + M G L + ++D + L+W V I K M YL
Sbjct: 90 LGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGMN----YLED 142
Query: 324 DCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTY--GYIAPELAY 381
++HRD+++ N+L+ + + DFG A+LL A+ G ++A E
Sbjct: 143 R---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESIL 199
Query: 382 TMVMTEKCDVYSFGVVTLEVL-MGKHPRDIXXXXXXXXDPKIMLIDVLD--QRLP-PPVD 437
+ T + DV+S+GV E++ G P D P + +L+ +RLP PP+
Sbjct: 200 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGI--------PASEISSILEKGERLPQPPI- 250
Query: 438 RKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTP 479
D+ +I C + SRP + + EF + P
Sbjct: 251 --CTIDVYMIMV---KCWMIDADSRPKFRELIIEFSKMARDP 287
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 127/282 (45%), Gaps = 39/282 (13%)
Query: 213 IGTGGYGSVYKA-QLPNGKVF----ALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKL 267
+G+G +G+VYK +P G+ A+K+L + K +EA V++ V + ++ +L
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 268 YGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVE----LDWAKRVNIVKAMAHALAYLHH 323
G CL LI + M G L + ++D + L+W V I K M YL
Sbjct: 85 LGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGMN----YLED 137
Query: 324 DCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTY--GYIAPELAY 381
++HRD+++ N+L+ + + DFG A+LL A+ G ++A E
Sbjct: 138 R---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESIL 194
Query: 382 TMVMTEKCDVYSFGVVTLEVL-MGKHPRDIXXXXXXXXDPKIMLIDVLD--QRLP-PPVD 437
+ T + DV+S+GV E++ G P D P + +L+ +RLP PP+
Sbjct: 195 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGI--------PASEISSILEKGERLPQPPI- 245
Query: 438 RKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTP 479
D+ +I C + SRP + + EF + P
Sbjct: 246 --CTIDVYMIMR---KCWMIDADSRPKFRELIIEFSKMARDP 282
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 127/282 (45%), Gaps = 39/282 (13%)
Query: 213 IGTGGYGSVYKA-QLPNGKVF----ALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKL 267
+G+G +G+VYK +P G+ A+K+L + K +EA V++ V + ++ +L
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 268 YGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVE----LDWAKRVNIVKAMAHALAYLHH 323
G CL LI + M G L + ++D + L+W V I K M YL
Sbjct: 83 LGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGMN----YLE- 134
Query: 324 DCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTY--GYIAPELAY 381
++HRD+++ N+L+ + + DFG A+LL A+ G ++A E
Sbjct: 135 --DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESIL 192
Query: 382 TMVMTEKCDVYSFGVVTLEVL-MGKHPRDIXXXXXXXXDPKIMLIDVLD--QRLP-PPVD 437
+ T + DV+S+GV E++ G P D P + +L+ +RLP PP+
Sbjct: 193 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGI--------PASEISSILEKGERLPQPPI- 243
Query: 438 RKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTP 479
D+ +I C + SRP + + EF + P
Sbjct: 244 --CTIDVYMIMV---KCWMIDADSRPKFRELIIEFSKMARDP 280
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 124/279 (44%), Gaps = 39/279 (13%)
Query: 201 IEATEDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVL 260
++ E ++I +G G +G VYKA+ A K+ ++ ++ + E ++L+
Sbjct: 15 LDPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCD 74
Query: 261 HRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVN------IVKAM 314
H IVKL G H ++++ E+ G++ DA+ L+ + + + + M
Sbjct: 75 HPYIVKLLGAYYHDGKLWIMIEFCPGGAV--------DAIMLELDRGLTEPQIQVVCRQM 126
Query: 315 AHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGY 374
AL +LH S IIHRD+ + N+L+ + + +ADFG + R GT +
Sbjct: 127 LEALNFLH---SKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYW 183
Query: 375 IAPELAYTMVMTE-----KCDVYSFGVVTLEVLMGKHPRDIXXXXXXXXDPKIMLIDVLD 429
+APE+ M + K D++S G+ +E+ + P +P +L+ +
Sbjct: 184 MAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPH-------HELNPMRVLLKIAK 236
Query: 430 QRLP----PPVDRKVIRDILLISTVSFACLQSNPKSRPT 464
P P RD L I+ L NP++RP+
Sbjct: 237 SDPPTLLTPSKWSVEFRDFLKIA------LDKNPETRPS 269
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 127/282 (45%), Gaps = 39/282 (13%)
Query: 213 IGTGGYGSVYKA-QLPNGKVF----ALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKL 267
+G+G +G+VYK +P G+ A+K+L + K +EA V++ V + ++ +L
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 268 YGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVE----LDWAKRVNIVKAMAHALAYLHH 323
G CL LI + M G L + ++D + L+W V I K M YL
Sbjct: 85 LGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGMN----YLED 137
Query: 324 DCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTY--GYIAPELAY 381
++HRD+++ N+L+ + + DFG A+LL A+ G ++A E
Sbjct: 138 R---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 194
Query: 382 TMVMTEKCDVYSFGVVTLEVL-MGKHPRDIXXXXXXXXDPKIMLIDVLD--QRLP-PPVD 437
+ T + DV+S+GV E++ G P D P + +L+ +RLP PP+
Sbjct: 195 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGI--------PASEISSILEKGERLPQPPI- 245
Query: 438 RKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTP 479
D+ +I C + SRP + + EF + P
Sbjct: 246 --CTIDVYMIMV---KCWMIDADSRPKFRELIIEFSKMARDP 282
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 128/282 (45%), Gaps = 39/282 (13%)
Query: 213 IGTGGYGSVYKA-QLPNGKVF----ALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKL 267
+G+G +G+VYK +P G+ A+K+L + K +EA V++ V + ++ +L
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 268 YGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVE----LDWAKRVNIVKAMAHALAYLHH 323
G CL + LI + M G L + ++D + L+W V I K M YL
Sbjct: 85 LGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGMN----YLED 137
Query: 324 DCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTY--GYIAPELAY 381
++HRD+++ N+L+ + + DFG A+LL A+ G ++A E
Sbjct: 138 R---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESIL 194
Query: 382 TMVMTEKCDVYSFGVVTLEVL-MGKHPRDIXXXXXXXXDPKIMLIDVLD--QRLP-PPVD 437
+ T + DV+S+GV E++ G P D P + +L+ +RLP PP+
Sbjct: 195 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGI--------PASEISSILEKGERLPQPPI- 245
Query: 438 RKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTP 479
D+ +I C + SRP + + EF + P
Sbjct: 246 --CTIDVYMIMR---KCWMIDADSRPKFRELIIEFSKMARDP 282
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 127/282 (45%), Gaps = 39/282 (13%)
Query: 213 IGTGGYGSVYKA-QLPNGKVF----ALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKL 267
+G+G +G+VYK +P G+ A+K+L + K +EA V++ V + ++ +L
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 268 YGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVE----LDWAKRVNIVKAMAHALAYLHH 323
G CL LI + M G L + ++D + L+W V I K M YL
Sbjct: 86 LGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGMN----YLED 138
Query: 324 DCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTY--GYIAPELAY 381
++HRD+++ N+L+ + + DFG A+LL A+ G ++A E
Sbjct: 139 R---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 195
Query: 382 TMVMTEKCDVYSFGVVTLEVL-MGKHPRDIXXXXXXXXDPKIMLIDVLD--QRLP-PPVD 437
+ T + DV+S+GV E++ G P D P + +L+ +RLP PP+
Sbjct: 196 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGI--------PASEISSILEKGERLPQPPI- 246
Query: 438 RKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTP 479
D+ +I C + SRP + + EF + P
Sbjct: 247 --CTIDVYMIMV---KCWMIDADSRPKFRELIIEFSKMARDP 283
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 106/212 (50%), Gaps = 32/212 (15%)
Query: 212 CIGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVL--HRNIVKLYG 269
C+G G YG V++ L +G+ A+K + +E +S+ E ++ + VL H NI+
Sbjct: 15 CVGKGRYGEVWRG-LWHGESVAVKIFSSRDE----QSWFRETEIYNTVLLRHDNILGFIA 69
Query: 270 YCLHKK----CMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDC 325
+ + ++LI Y E GSL+ L +E A R+ + + A LA+LH +
Sbjct: 70 SDMTSRNSSTQLWLITHYHEHGSLYDFLQRQ--TLEPHLALRLAV--SAACGLAHLHVEI 125
Query: 326 -----SPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLA-----GTYGYI 375
P+I HRD S N+L+ S L+ +AD G A ++H+ S+ + GT Y+
Sbjct: 126 FGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLA-VMHSQGSDYLDIGNNPRVGTKRYM 184
Query: 376 APELAYTMVMTE------KCDVYSFGVVTLEV 401
APE+ + T+ D+++FG+V E+
Sbjct: 185 APEVLDEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 127/282 (45%), Gaps = 39/282 (13%)
Query: 213 IGTGGYGSVYKA-QLPNGKVF----ALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKL 267
+G+G +G+VYK +P G+ A+K+L + K +EA V++ V + ++ +L
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 268 YGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVE----LDWAKRVNIVKAMAHALAYLHH 323
G CL LI + M G L + ++D + L+W V I K M YL
Sbjct: 83 LGICLTSTVQ-LITQLMPFGXLLDYVREHKDNIGSQYLLNWC--VQIAKGMN----YLE- 134
Query: 324 DCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTY--GYIAPELAY 381
++HRD+++ N+L+ + + DFG A+LL A+ G ++A E
Sbjct: 135 --DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 192
Query: 382 TMVMTEKCDVYSFGVVTLEVL-MGKHPRDIXXXXXXXXDPKIMLIDVLD--QRLP-PPVD 437
+ T + DV+S+GV E++ G P D P + +L+ +RLP PP+
Sbjct: 193 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGI--------PASEISSILEKGERLPQPPI- 243
Query: 438 RKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTP 479
D+ +I C + SRP + + EF + P
Sbjct: 244 --CTIDVYMIMV---KCWMIDADSRPKFRELIIEFSKMARDP 280
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 127/282 (45%), Gaps = 39/282 (13%)
Query: 213 IGTGGYGSVYKA-QLPNGKVF----ALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKL 267
+G+G +G+VYK +P G+ A+K+L + K +EA V++ V + ++ +L
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 268 YGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVE----LDWAKRVNIVKAMAHALAYLHH 323
G CL LI + M G L + ++D + L+W V I K M YL
Sbjct: 86 LGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGMN----YLED 138
Query: 324 DCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTY--GYIAPELAY 381
++HRD+++ N+L+ + + DFG A+LL A+ G ++A E
Sbjct: 139 R---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 195
Query: 382 TMVMTEKCDVYSFGVVTLEVL-MGKHPRDIXXXXXXXXDPKIMLIDVLD--QRLP-PPVD 437
+ T + DV+S+GV E++ G P D P + +L+ +RLP PP+
Sbjct: 196 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGI--------PASEISSILEKGERLPQPPI- 246
Query: 438 RKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTP 479
D+ +I C + SRP + + EF + P
Sbjct: 247 --CTIDVYMIMV---KCWMIDADSRPKFRELIIEFSKMARDP 283
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 110/238 (46%), Gaps = 15/238 (6%)
Query: 178 RATNNIDVFSIWNYDGRIVYEDLIEATEDFDIRYCIGTGGYGSVYKAQLPNG-KVFALKK 236
R NID F D DL ED+++ IG G +G V + + KV+A+K
Sbjct: 47 RKNKNIDNFLSRYKDTINKIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKL 106
Query: 237 LHTSEELAFIKS--FKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLH 294
L E + S F E +++ +V+L+ + ++++ EYM G L NL
Sbjct: 107 LSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDL-VNLM 165
Query: 295 NNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGT 354
+N D E WA+ + AL +H S IHRD+ +N+LL+ +ADFGT
Sbjct: 166 SNYDVPE-KWARF--YTAEVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGT 219
Query: 355 ARLLHADSSNRTLLA-GTYGYIAPELAYTM----VMTEKCDVYSFGVVTLEVLMGKHP 407
++ + R A GT YI+PE+ + +CD +S GV E+L+G P
Sbjct: 220 CMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 277
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 127/282 (45%), Gaps = 39/282 (13%)
Query: 213 IGTGGYGSVYKA-QLPNGKVF----ALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKL 267
+G+G +G+VYK +P G+ A+K+L + K +EA V++ V + ++ +L
Sbjct: 30 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 89
Query: 268 YGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVE----LDWAKRVNIVKAMAHALAYLHH 323
G CL LI + M G L + ++D + L+W V I K M YL
Sbjct: 90 LGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGMN----YLED 142
Query: 324 DCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTY--GYIAPELAY 381
++HRD+++ N+L+ + + DFG A+LL A+ G ++A E
Sbjct: 143 R---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 199
Query: 382 TMVMTEKCDVYSFGVVTLEVL-MGKHPRDIXXXXXXXXDPKIMLIDVLD--QRLP-PPVD 437
+ T + DV+S+GV E++ G P D P + +L+ +RLP PP+
Sbjct: 200 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGI--------PASEISSILEKGERLPQPPI- 250
Query: 438 RKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTP 479
D+ +I C + SRP + + EF + P
Sbjct: 251 --CTIDVYMIMV---KCWMIDADSRPKFRELIIEFSKMARDP 287
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 110/238 (46%), Gaps = 15/238 (6%)
Query: 178 RATNNIDVFSIWNYDGRIVYEDLIEATEDFDIRYCIGTGGYGSVYKAQLPNG-KVFALKK 236
R NID F D DL ED+++ IG G +G V + + KV+A+K
Sbjct: 42 RKNKNIDNFLSRYKDTINKIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKL 101
Query: 237 LHTSEELAFIKS--FKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLH 294
L E + S F E +++ +V+L+ + ++++ EYM G L NL
Sbjct: 102 LSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDL-VNLM 160
Query: 295 NNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGT 354
+N D E WA+ + AL +H S IHRD+ +N+LL+ +ADFGT
Sbjct: 161 SNYDVPE-KWARF--YTAEVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGT 214
Query: 355 ARLLHADSSNRTLLA-GTYGYIAPELAYTM----VMTEKCDVYSFGVVTLEVLMGKHP 407
++ + R A GT YI+PE+ + +CD +S GV E+L+G P
Sbjct: 215 CMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 272
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 126/278 (45%), Gaps = 31/278 (11%)
Query: 213 IGTGGYGSVYKA-QLPNGKVF----ALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKL 267
+G+G +G+VYK +P G+ A+K+L + K +EA V++ V + ++ +L
Sbjct: 20 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 79
Query: 268 YGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSP 327
G CL LI + M G L + ++D + + +N +A + YL
Sbjct: 80 LGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL--LNWCVQIAEGMNYLE---DR 133
Query: 328 SIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTY--GYIAPELAYTMVM 385
++HRD+++ N+L+ + + DFG A+LL A+ G ++A E +
Sbjct: 134 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 193
Query: 386 TEKCDVYSFGVVTLEVL-MGKHPRDIXXXXXXXXDPKIMLIDVLD--QRLP-PPVDRKVI 441
T + DV+S+GV E++ G P D P + +L+ +RLP PP+
Sbjct: 194 THQSDVWSYGVTVWELMTFGSKPYDGI--------PASEISSILEKGERLPQPPI---CT 242
Query: 442 RDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTP 479
D+ +I C + SRP + + EF + P
Sbjct: 243 IDVYMIMV---KCWMIDADSRPKFRELIIEFSKMARDP 277
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 127/282 (45%), Gaps = 39/282 (13%)
Query: 213 IGTGGYGSVYKA-QLPNGKVF----ALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKL 267
+G+G +G+VYK +P G+ A+K+L + K +EA V++ V + ++ +L
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 268 YGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVE----LDWAKRVNIVKAMAHALAYLHH 323
G CL LI + M G L + ++D + L+W V I K M YL
Sbjct: 83 LGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGMN----YLE- 134
Query: 324 DCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTY--GYIAPELAY 381
++HRD+++ N+L+ + + DFG A+LL A+ G ++A E
Sbjct: 135 --DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 192
Query: 382 TMVMTEKCDVYSFGVVTLEVL-MGKHPRDIXXXXXXXXDPKIMLIDVLD--QRLP-PPVD 437
+ T + DV+S+GV E++ G P D P + +L+ +RLP PP+
Sbjct: 193 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGI--------PASEISSILEKGERLPQPPI- 243
Query: 438 RKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTP 479
D+ +I C + SRP + + EF + P
Sbjct: 244 --CTIDVYMIMV---KCWMIDADSRPKFRELIIEFSKMARDP 280
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 113/258 (43%), Gaps = 24/258 (9%)
Query: 213 IGTGGYGSVYKAQLPNGKVFALK--KLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGY 270
+GTG +G V + A+K K + E FI+ EA+V+ + H +V+LYG
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIE----EAKVMMNLSHEKLVQLYGV 72
Query: 271 CLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSII 330
C ++ +F+I EYM G L L + + + + K + A+ YL S +
Sbjct: 73 CTKQRPIFIITEYMANGCLLNYLREMRHRFQTQ--QLLEMCKDVCEAMEYLE---SKQFL 127
Query: 331 HRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGT-YGYIAPELAYTMVMTEKC 389
HRD+++ N L+N + V+DFG +R + D + + + PE+ + K
Sbjct: 128 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSPPEVLMYSKFSSKS 187
Query: 390 DVYSFGVVTLEVL-MGKHPRDIXXXXXXXXDPKIMLIDVLDQRLPPPVDRKVIRDILLIS 448
D+++FGV+ E+ +GK P + + + L P KV
Sbjct: 188 DIWAFGVLMWEIYSLGKMPYE----RFTNSETAEHIAQGLRLYRPHLASEKVY------- 236
Query: 449 TVSFACLQSNPKSRPTMQ 466
T+ ++C RPT +
Sbjct: 237 TIMYSCWHEKADERPTFK 254
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 99/215 (46%), Gaps = 21/215 (9%)
Query: 207 FDIRYCIGTGGYGSVYKAQ-LPNGKVFALKKLH-TSEELAFIKSFKNEAQVLSQVLHRNI 264
F++ +G G YG VYK + + G++ A+K + T +E IK N + S HRNI
Sbjct: 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSH--HRNI 83
Query: 265 VKLYGYCLHKK------CMFLIYEYMERGSLFCNLHNNE-DAVELDWAKRVNIVKAMAHA 317
YG + K ++L+ E+ GS+ + N + + ++ +W I + +
Sbjct: 84 ATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWI--AYICREILRG 141
Query: 318 LAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAP 377
L++LH +IHRDI N+LL E + DFG + L R GT ++AP
Sbjct: 142 LSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAP 198
Query: 378 ELAY-----TMVMTEKCDVYSFGVVTLEVLMGKHP 407
E+ K D++S G+ +E+ G P
Sbjct: 199 EVIACDENPDATYDFKSDLWSLGITAIEMAEGAPP 233
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 103/212 (48%), Gaps = 14/212 (6%)
Query: 205 EDFDIRYCIGTGGYGSVYKAQLPNG-KVFALKKLHTSEEL--AFIKSFKNEAQVLSQVLH 261
EDF+I IG G +G V ++ N +++A+K L+ E L A F+ E VL
Sbjct: 74 EDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDC 133
Query: 262 RNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYL 321
+ I L+ + ++L+ +Y G L L ED + D A+ + M A+ +
Sbjct: 134 QWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFY--IGEMVLAIDSI 191
Query: 322 HHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLA-GTYGYIAPELA 380
H +HRDI +N+LL+ +ADFG+ ++ D + ++ +A GT YI+PE+
Sbjct: 192 HQ---LHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEIL 248
Query: 381 YTMV-----MTEKCDVYSFGVVTLEVLMGKHP 407
M +CD +S GV E+L G+ P
Sbjct: 249 QAMEDGMGKYGPECDWWSLGVCMYEMLYGETP 280
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 127/282 (45%), Gaps = 39/282 (13%)
Query: 213 IGTGGYGSVYKA-QLPNGKVF----ALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKL 267
+G+G +G+VYK +P G+ A+K+L + K +EA V++ V + ++ +L
Sbjct: 48 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 107
Query: 268 YGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVE----LDWAKRVNIVKAMAHALAYLHH 323
G CL LI + M G L + ++D + L+W V I K M YL
Sbjct: 108 LGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGMN----YLE- 159
Query: 324 DCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTY--GYIAPELAY 381
++HRD+++ N+L+ + + DFG A+LL A+ G ++A E
Sbjct: 160 --DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 217
Query: 382 TMVMTEKCDVYSFGVVTLEVL-MGKHPRDIXXXXXXXXDPKIMLIDVLD--QRLP-PPVD 437
+ T + DV+S+GV E++ G P D P + +L+ +RLP PP+
Sbjct: 218 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGI--------PASEISSILEKGERLPQPPI- 268
Query: 438 RKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTP 479
D+ +I C + SRP + + EF + P
Sbjct: 269 --CTIDVYMIMV---KCWMIDADSRPKFRELIIEFSKMARDP 305
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 99/215 (46%), Gaps = 19/215 (8%)
Query: 205 EDFDIRYCIGTGGYGSVYKAQL----PNGKVFALKKLHTS---EELAFIKSFKNEAQVLS 257
E+F++ +GTG YG V+ + GK++A+K L + ++ + + E QVL
Sbjct: 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLE 113
Query: 258 QVLHRNIVKLYGYCLHKKC-MFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNI-VKAMA 315
+ + Y + + LI +Y+ G LF +L E E V I V +
Sbjct: 114 HIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTE----HEVQIYVGEIV 169
Query: 316 HALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTL-LAGTYGY 374
AL +LH II+RDI NILL+S + DFG ++ AD + R GT Y
Sbjct: 170 LALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEY 226
Query: 375 IAPEL--AYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
+AP++ + D +S GV+ E+L G P
Sbjct: 227 MAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASP 261
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 84/164 (51%), Gaps = 11/164 (6%)
Query: 247 KSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAK 306
+S E Q+L Q+ H NI+KLY + K +L+ E G LF + + + E+D A+
Sbjct: 77 ESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR 136
Query: 307 RVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAF---VADFGTARLLHADSS 363
I++ + + Y+H + I+HRD+ N+LL SK + + DFG + A
Sbjct: 137 ---IIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK 190
Query: 364 NRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
+ + Y YIAPE+ + EKCDV+S GV+ +L G P
Sbjct: 191 MKDKIGTAY-YIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPP 232
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 110/238 (46%), Gaps = 15/238 (6%)
Query: 178 RATNNIDVFSIWNYDGRIVYEDLIEATEDFDIRYCIGTGGYGSVYKAQLPNG-KVFALKK 236
R NID F D DL ED+++ IG G +G V + + KV+A+K
Sbjct: 47 RKNKNIDNFLSRYKDTINKIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKL 106
Query: 237 LHTSEELAFIKS--FKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLH 294
L E + S F E +++ +V+L+ + ++++ EYM G L NL
Sbjct: 107 LSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDL-VNLM 165
Query: 295 NNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGT 354
+N D E WA+ + AL +H S IHRD+ +N+LL+ +ADFGT
Sbjct: 166 SNYDVPE-KWARF--YTAEVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGT 219
Query: 355 ARLLHADSSNRTLLA-GTYGYIAPELAYTM----VMTEKCDVYSFGVVTLEVLMGKHP 407
++ + R A GT YI+PE+ + +CD +S GV E+L+G P
Sbjct: 220 CMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 277
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 127/282 (45%), Gaps = 39/282 (13%)
Query: 213 IGTGGYGSVYKA-QLPNGKVF----ALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKL 267
+G+G +G+VYK +P G+ A+K+L + K +EA V++ V + ++ +L
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 268 YGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVE----LDWAKRVNIVKAMAHALAYLHH 323
G CL LI + M G L + ++D + L+W V I K M YL
Sbjct: 83 LGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGMN----YLED 135
Query: 324 DCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTY--GYIAPELAY 381
++HRD+++ N+L+ + + DFG A+LL A+ G ++A E
Sbjct: 136 R---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 192
Query: 382 TMVMTEKCDVYSFGVVTLEVL-MGKHPRDIXXXXXXXXDPKIMLIDVLD--QRLP-PPVD 437
+ T + DV+S+GV E++ G P D P + +L+ +RLP PP+
Sbjct: 193 HRIYTHQSDVWSYGVTVWELMTFGSKPYD--------GIPASEISSILEKGERLPQPPI- 243
Query: 438 RKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTP 479
D+ +I C + SRP + + EF + P
Sbjct: 244 --CTIDVYMIMR---KCWMIDADSRPKFRELIIEFSKMARDP 280
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 127/282 (45%), Gaps = 39/282 (13%)
Query: 213 IGTGGYGSVYKA-QLPNGKVF----ALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKL 267
+G+G +G+VYK +P G+ A+K+L + K +EA V++ V + ++ +L
Sbjct: 33 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 92
Query: 268 YGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVE----LDWAKRVNIVKAMAHALAYLHH 323
G CL LI + M G L + ++D + L+W V I K M YL
Sbjct: 93 LGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGMN----YLE- 144
Query: 324 DCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTY--GYIAPELAY 381
++HRD+++ N+L+ + + DFG A+LL A+ G ++A E
Sbjct: 145 --DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 202
Query: 382 TMVMTEKCDVYSFGVVTLEVL-MGKHPRDIXXXXXXXXDPKIMLIDVLD--QRLP-PPVD 437
+ T + DV+S+GV E++ G P D P + +L+ +RLP PP+
Sbjct: 203 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGI--------PASEISSILEKGERLPQPPI- 253
Query: 438 RKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTP 479
D+ +I C + SRP + + EF + P
Sbjct: 254 --CTIDVYMIMR---KCWMIDADSRPKFRELIIEFSKMARDP 290
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 127/282 (45%), Gaps = 39/282 (13%)
Query: 213 IGTGGYGSVYKA-QLPNGKVF----ALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKL 267
+G+G +G+VYK +P G+ A+K+L + K +EA V++ V + ++ +L
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 268 YGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVE----LDWAKRVNIVKAMAHALAYLHH 323
G CL LI + M G L + ++D + L+W V I K M YL
Sbjct: 86 LGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGMN----YLED 138
Query: 324 DCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTY--GYIAPELAY 381
++HRD+++ N+L+ + + DFG A+LL A+ G ++A E
Sbjct: 139 R---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 195
Query: 382 TMVMTEKCDVYSFGVVTLEVL-MGKHPRDIXXXXXXXXDPKIMLIDVLD--QRLP-PPVD 437
+ T + DV+S+GV E++ G P D P + +L+ +RLP PP+
Sbjct: 196 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGI--------PASEISSILEKGERLPQPPI- 246
Query: 438 RKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTP 479
D+ +I C + SRP + + EF + P
Sbjct: 247 --CTIDVYMIMR---KCWMIDADSRPKFRELIIEFSKMARDP 283
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 128/282 (45%), Gaps = 39/282 (13%)
Query: 213 IGTGGYGSVYKA-QLPNGKVF----ALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKL 267
+G+G +G+VYK +P G+ A+K+L + K +EA V++ V + ++ +L
Sbjct: 29 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 88
Query: 268 YGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVE----LDWAKRVNIVKAMAHALAYLHH 323
G CL + LI + M G L + ++D + L+W V I K M YL
Sbjct: 89 LGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGMN----YLE- 140
Query: 324 DCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTY--GYIAPELAY 381
++HRD+++ N+L+ + + DFG A+LL A+ G ++A E
Sbjct: 141 --DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 198
Query: 382 TMVMTEKCDVYSFGVVTLEVL-MGKHPRDIXXXXXXXXDPKIMLIDVLD--QRLP-PPVD 437
+ T + DV+S+GV E++ G P D P + +L+ +RLP PP+
Sbjct: 199 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGI--------PASEISSILEKGERLPQPPI- 249
Query: 438 RKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTP 479
D+ +I C + SRP + + EF + P
Sbjct: 250 --CTIDVYMIMV---KCWMIDADSRPKFRELIIEFSKMARDP 286
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 124/282 (43%), Gaps = 48/282 (17%)
Query: 213 IGTGGYGSVYKA-QLPNGKV-----FALKKLHTSEELAFIKSFKNEAQVLSQV-LHRNIV 265
+G G +G V +A GK A+K L ++ ++ +E +++S + H NIV
Sbjct: 46 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 105
Query: 266 KLYGYCLHKKCMFLIYEYMERGSLFCNLH-------NNEDAVELDWAKRVNIVKAMAHAL 318
L G C H + +I EY G L L + ED L+ ++ +A +
Sbjct: 106 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGM 165
Query: 319 AYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGT----YGY 374
A+L S + IHRD+++ N+LL + A + DFG AR + DS+ ++ G +
Sbjct: 166 AFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN--YIVKGNARLPVKW 220
Query: 375 IAPELAYTMVMTEKCDVYSFGVVTLEVL-MGKHPRDIXXXXXXXXDPKIM-------LID 426
+APE + V T + DV+S+G++ E+ +G +P P I+ L+
Sbjct: 221 MAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY-----------PGILVNSKFYKLVK 269
Query: 427 VLDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSV 468
Q P K I I+ AC P RPT Q +
Sbjct: 270 DGYQMAQPAFAPKNIYSIMQ------ACWALEPTHRPTFQQI 305
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 83/161 (51%), Gaps = 11/161 (6%)
Query: 247 KSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAK 306
+S E Q+L Q+ H NI+KLY + K +L+ E G LF + + + E+D A+
Sbjct: 94 ESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR 153
Query: 307 RVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAF---VADFGTARLLHADSS 363
I++ + + Y+H + I+HRD+ N+LL SK + + DFG + A
Sbjct: 154 ---IIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK 207
Query: 364 NRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMG 404
+ + Y YIAPE+ + EKCDV+S GV+ +L G
Sbjct: 208 MKDKIGTAY-YIAPEVLHG-TYDEKCDVWSTGVILYILLSG 246
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 127/282 (45%), Gaps = 39/282 (13%)
Query: 213 IGTGGYGSVYKA-QLPNGKVF----ALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKL 267
+G+G +G+VYK +P G+ A+K+L + K +EA V++ V + ++ +L
Sbjct: 17 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 76
Query: 268 YGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVE----LDWAKRVNIVKAMAHALAYLHH 323
G CL LI + M G L + ++D + L+W V I K M YL
Sbjct: 77 LGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGMN----YLE- 128
Query: 324 DCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTY--GYIAPELAY 381
++HRD+++ N+L+ + + DFG A+LL A+ G ++A E
Sbjct: 129 --DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 186
Query: 382 TMVMTEKCDVYSFGVVTLEVL-MGKHPRDIXXXXXXXXDPKIMLIDVLD--QRLP-PPVD 437
+ T + DV+S+GV E++ G P D P + +L+ +RLP PP+
Sbjct: 187 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGI--------PASEISSILEKGERLPQPPI- 237
Query: 438 RKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTP 479
D+ +I C + SRP + + EF + P
Sbjct: 238 --CTIDVYMIMV---KCWMIDADSRPKFRELIIEFSKMARDP 274
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 83/161 (51%), Gaps = 11/161 (6%)
Query: 247 KSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAK 306
+S E Q+L Q+ H NI+KLY + K +L+ E G LF + + + E+D A+
Sbjct: 95 ESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR 154
Query: 307 RVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAF---VADFGTARLLHADSS 363
I++ + + Y+H + I+HRD+ N+LL SK + + DFG + A
Sbjct: 155 ---IIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK 208
Query: 364 NRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMG 404
+ + Y YIAPE+ + EKCDV+S GV+ +L G
Sbjct: 209 MKDKIGTAY-YIAPEVLHG-TYDEKCDVWSTGVILYILLSG 247
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 83/161 (51%), Gaps = 11/161 (6%)
Query: 247 KSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAK 306
+S E Q+L Q+ H NI+KLY + K +L+ E G LF + + + E+D A+
Sbjct: 71 ESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR 130
Query: 307 RVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAF---VADFGTARLLHADSS 363
I++ + + Y+H + I+HRD+ N+LL SK + + DFG + A
Sbjct: 131 ---IIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK 184
Query: 364 NRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMG 404
+ + Y YIAPE+ + EKCDV+S GV+ +L G
Sbjct: 185 MKDKIGTAY-YIAPEVLHG-TYDEKCDVWSTGVILYILLSG 223
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 103/212 (48%), Gaps = 14/212 (6%)
Query: 205 EDFDIRYCIGTGGYGSVYKAQLPNG-KVFALKKLHTSEEL--AFIKSFKNEAQVLSQVLH 261
EDF+I IG G +G V ++ N +++A+K L+ E L A F+ E VL
Sbjct: 90 EDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDC 149
Query: 262 RNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYL 321
+ I L+ + ++L+ +Y G L L ED + D A+ + M A+ +
Sbjct: 150 QWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFY--IGEMVLAIDSI 207
Query: 322 HHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLA-GTYGYIAPELA 380
H +HRDI +N+LL+ +ADFG+ ++ D + ++ +A GT YI+PE+
Sbjct: 208 HQ---LHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEIL 264
Query: 381 YTMV-----MTEKCDVYSFGVVTLEVLMGKHP 407
M +CD +S GV E+L G+ P
Sbjct: 265 QAMEDGMGKYGPECDWWSLGVCMYEMLYGETP 296
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 98/201 (48%), Gaps = 18/201 (8%)
Query: 213 IGTGGYGSVYKA-----QLPNGKVFALKKL-HTSEELAFIKSFKNEAQVLSQVLHRNIVK 266
+G G +GSV Q G+V A+KKL H++EE ++ F+ E ++L + H NIVK
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE--HLRDFEREIEILKSLQHDNIVK 76
Query: 267 LYGYCLH--KKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHD 324
G C ++ + LI EY+ GSL L +++ + D K + + + YL
Sbjct: 77 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI--DHIKLLQYTSQICKGMEYL--- 131
Query: 325 CSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYG---YIAPELAY 381
+ IHR++++ NIL+ ++ + DFG ++L D + + APE
Sbjct: 132 GTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLT 191
Query: 382 TMVMTEKCDVYSFGVVTLEVL 402
+ DV+SFGVV E+
Sbjct: 192 ESKFSVASDVWSFGVVLYELF 212
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 122/277 (44%), Gaps = 22/277 (7%)
Query: 205 EDFDIRYCIGTGGYGSVYK-AQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRN 263
+DF+ +G G G V+K + P+G V A K +H + A E QVL +
Sbjct: 25 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 84
Query: 264 IVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHH 323
IV YG + + E+M+ GSL L E K V+I A+ L YL
Sbjct: 85 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGK-VSI--AVIKGLTYLRE 141
Query: 324 DCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYTM 383
I+HRD+ +NIL+NS+ E + DFG + L +N GT Y++PE
Sbjct: 142 --KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS--FVGTRSYMSPERLQGT 197
Query: 384 VMTEKCDVYSFGVVTLEVLMGKHPRDIXXXXXXXXDPKIMLIDVLDQRL--PPPVDRKVI 441
+ + D++S G+ +E+ +G++P + + ++LD + PPP K+
Sbjct: 198 HYSVQSDIWSMGLSLVEMAVGRYP-------IGSGSGSMAIFELLDYIVNEPPP---KLP 247
Query: 442 RDILLISTVSFA--CLQSNPKSRPTMQSVSQEFLITR 476
+ + F CL NP R ++ + I R
Sbjct: 248 SGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKR 284
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 124/292 (42%), Gaps = 45/292 (15%)
Query: 206 DFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNI 264
DF IG+GG+G V+KA+ +GK + +K++ + E A + E + L+++ H NI
Sbjct: 12 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKA-----EREVKALAKLDHVNI 66
Query: 265 VKLYGYCL-----------------HKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKR 307
V Y C KC+F+ E+ ++G+L + +LD
Sbjct: 67 VH-YNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRR-GEKLDKVLA 124
Query: 308 VNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTL 367
+ + + + + Y+H S +I+RD+ +NI L + + DFG L D R
Sbjct: 125 LELFEQITKGVDYIH---SKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKND-GKRXR 180
Query: 368 LAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDIXXXXXXXXDPKIMLIDV 427
GT Y++PE + ++ D+Y+ G++ E+L H D D+
Sbjct: 181 SKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL---HVCDTAFETSK------FFTDL 231
Query: 428 LDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTP 479
D + D+K T+ L P+ RP + + + +K+P
Sbjct: 232 RDGIISDIFDKKE-------KTLLQKLLSKKPEDRPNTSEILRTLTVWKKSP 276
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 124/282 (43%), Gaps = 48/282 (17%)
Query: 213 IGTGGYGSVYKAQLPN-GKV-----FALKKLHTSEELAFIKSFKNEAQVLSQV-LHRNIV 265
+G G +G V +A GK A+K L ++ ++ +E +++S + H NIV
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 266 KLYGYCLHKKCMFLIYEYMERGSLFCNLH-------NNEDAVELDWAKRVNIVKAMAHAL 318
L G C H + +I EY G L L + ED L+ ++ +A +
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGM 173
Query: 319 AYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGT----YGY 374
A+L S + IHRD+++ N+LL + A + DFG AR + DS+ ++ G +
Sbjct: 174 AFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN--YIVKGNARLPVKW 228
Query: 375 IAPELAYTMVMTEKCDVYSFGVVTLEVL-MGKHPRDIXXXXXXXXDPKIM-------LID 426
+APE + V T + DV+S+G++ E+ +G +P P I+ L+
Sbjct: 229 MAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY-----------PGILVNSKFYKLVK 277
Query: 427 VLDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSV 468
Q P K I I+ AC P RPT Q +
Sbjct: 278 DGYQMAQPAFAPKNIYSIMQ------ACWALEPTHRPTFQQI 313
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 108/231 (46%), Gaps = 19/231 (8%)
Query: 185 VFSIWNYDGRIVYEDLIEATED-----FDIRYCIGTGGYGSVYK-AQLPNGKVFALKKLH 238
VF IW + Y +E D +DI +GTG +G V++ + G FA K +
Sbjct: 136 VFDIW----KQYYPQPVEIKHDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVM 191
Query: 239 TSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNED 298
T E + ++ + E Q +S + H +V L+ M +IYE+M G LF + + +
Sbjct: 192 TPHE-SDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHN 250
Query: 299 AVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKL--EAFVADFGTAR 356
+ D A V ++ + L ++H + + +H D+ NI+ +K E + DFG
Sbjct: 251 KMSEDEA--VEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTA 305
Query: 357 LLHADSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
L S + + GT + APE+A + D++S GV++ +L G P
Sbjct: 306 HLDPKQSVK-VTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSP 355
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 96/207 (46%), Gaps = 10/207 (4%)
Query: 205 EDFDIRYCIGTGGYGSVYKAQLPN-GKVFALKKLHTSEELAF--IKSFKNEAQVLSQVL- 260
EDF + +G G +G V+ A+ + FA+K L L ++ E +VLS
Sbjct: 17 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWE 76
Query: 261 HRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAY 320
H + ++ K+ +F + EY+ G L +++ + + D ++ + L +
Sbjct: 77 HPFLTHMFCTFQTKENLFFVMEYLNGGDL---MYHIQSCHKFDLSRATFYAAEIILGLQF 133
Query: 321 LHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELA 380
LH S I++RD+ +NILL+ +ADFG + + GT YIAPE+
Sbjct: 134 LH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFCGTPDYIAPEIL 190
Query: 381 YTMVMTEKCDVYSFGVVTLEVLMGKHP 407
D +SFGV+ E+L+G+ P
Sbjct: 191 LGQKYNHSVDWWSFGVLLYEMLIGQSP 217
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 97/204 (47%), Gaps = 8/204 (3%)
Query: 205 EDFDIRYCIGTGGYGSVYK-AQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRN 263
+DF+ +G G G V+K + P+G V A K +H + A E QVL +
Sbjct: 68 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 127
Query: 264 IVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHH 323
IV YG + + E+M+ GSL L E K V+I A+ L YL
Sbjct: 128 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGK-VSI--AVIKGLTYLRE 184
Query: 324 DCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYTM 383
I+HRD+ +NIL+NS+ E + DFG + L +N GT Y++PE
Sbjct: 185 KHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS--FVGTRSYMSPERLQGT 240
Query: 384 VMTEKCDVYSFGVVTLEVLMGKHP 407
+ + D++S G+ +E+ +G++P
Sbjct: 241 HYSVQSDIWSMGLSLVEMAVGRYP 264
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 108/231 (46%), Gaps = 19/231 (8%)
Query: 185 VFSIWNYDGRIVYEDLIEATED-----FDIRYCIGTGGYGSVYK-AQLPNGKVFALKKLH 238
VF IW + Y +E D +DI +GTG +G V++ + G FA K +
Sbjct: 30 VFDIW----KQYYPQPVEIKHDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVM 85
Query: 239 TSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNED 298
T E + ++ + E Q +S + H +V L+ M +IYE+M G LF + + +
Sbjct: 86 TPHE-SDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHN 144
Query: 299 AVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKL--EAFVADFGTAR 356
+ D A V ++ + L ++H + + +H D+ NI+ +K E + DFG
Sbjct: 145 KMSEDEA--VEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTA 199
Query: 357 LLHADSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
L S + + GT + APE+A + D++S GV++ +L G P
Sbjct: 200 HLDPKQSVK-VTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSP 249
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 110/209 (52%), Gaps = 12/209 (5%)
Query: 204 TEDFDIRYCIGTGGYGSVYKA-QLPNGKVFALKKLHTSEELAF-IKSFKNEAQVLSQVLH 261
++++D++ +G G + V + G FA K ++T + A + + EA++ ++ H
Sbjct: 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 87
Query: 262 RNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYL 321
NIV+L+ + +L+++ + G LF ++ E E D + + ++ + ++AY
Sbjct: 88 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADAS---HCIQQILESIAYC 144
Query: 322 HHDCSPSIIHRDISSNNILLNSKLEAF---VADFGTARLLHADSSNRTLLAGTYGYIAPE 378
H S I+HR++ N+LL SK + +ADFG A ++ DS AGT GY++PE
Sbjct: 145 H---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN-DSEAWHGFAGTPGYLSPE 200
Query: 379 LAYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
+ ++ D+++ GV+ +L+G P
Sbjct: 201 VLKKDPYSKPVDIWACGVILYILLVGYPP 229
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 110/209 (52%), Gaps = 12/209 (5%)
Query: 204 TEDFDIRYCIGTGGYGSVYKA-QLPNGKVFALKKLHTSEELAF-IKSFKNEAQVLSQVLH 261
++++D++ +G G + V + G FA K ++T + A + + EA++ ++ H
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 262 RNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYL 321
NIV+L+ + +L+++ + G LF ++ E E D + + ++ + ++AY
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADAS---HCIQQILESIAYC 121
Query: 322 HHDCSPSIIHRDISSNNILLNSKLEAF---VADFGTARLLHADSSNRTLLAGTYGYIAPE 378
H S I+HR++ N+LL SK + +ADFG A ++ DS AGT GY++PE
Sbjct: 122 H---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN-DSEAWHGFAGTPGYLSPE 177
Query: 379 LAYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
+ ++ D+++ GV+ +L+G P
Sbjct: 178 VLKKDPYSKPVDIWACGVILYILLVGYPP 206
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 104/215 (48%), Gaps = 18/215 (8%)
Query: 204 TEDFDIRYCIGTGGYGSVYKAQ-LPNGKVFALKKLHT--SEELAFIKSFKNEAQVLSQVL 260
++ +++ +G GG V+ A+ L + + A+K L + + +F F+ EAQ + +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 261 HRNIVKLYGYCLHKKCM----FLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAH 316
H IV +Y + +++ EY++ +L +H + + + ++
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG---PMTPKRAIEVIADACQ 127
Query: 317 ALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNR----TLLAGTY 372
AL + H + IIHRD+ NIL+++ V DFG AR + ADS N + GT
Sbjct: 128 ALNFSHQN---GIIHRDVKPANILISATNAVKVVDFGIARAI-ADSGNSVXQTAAVIGTA 183
Query: 373 GYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
Y++PE A + + DVYS G V EVL G+ P
Sbjct: 184 QYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 81/161 (50%), Gaps = 11/161 (6%)
Query: 247 KSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAK 306
+S E Q+L Q+ H NI KLY + K +L+ E G LF + + + E+D A+
Sbjct: 71 ESLLREVQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR 130
Query: 307 RVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAF---VADFGTARLLHADSS 363
I++ + + Y H + I+HRD+ N+LL SK + + DFG + A
Sbjct: 131 ---IIRQVLSGITYXHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK 184
Query: 364 NRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMG 404
+ + Y YIAPE+ + EKCDV+S GV+ +L G
Sbjct: 185 XKDKIGTAY-YIAPEVLHG-TYDEKCDVWSTGVILYILLSG 223
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 110/209 (52%), Gaps = 12/209 (5%)
Query: 204 TEDFDIRYCIGTGGYGSVYKA-QLPNGKVFALKKLHTSEELAF-IKSFKNEAQVLSQVLH 261
++++D++ +G G + V + G FA K ++T + A + + EA++ ++ H
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 262 RNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYL 321
NIV+L+ + +L+++ + G LF ++ E E D + + ++ + ++AY
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADAS---HCIQQILESIAYC 121
Query: 322 HHDCSPSIIHRDISSNNILLNSKLEAF---VADFGTARLLHADSSNRTLLAGTYGYIAPE 378
H S I+HR++ N+LL SK + +ADFG A ++ DS AGT GY++PE
Sbjct: 122 H---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN-DSEAWHGFAGTPGYLSPE 177
Query: 379 LAYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
+ ++ D+++ GV+ +L+G P
Sbjct: 178 VLKKDPYSKPVDIWACGVILYILLVGYPP 206
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 99/209 (47%), Gaps = 23/209 (11%)
Query: 205 EDF-DIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRN 263
EDF +I +G G +G VYKAQ V A K+ ++ ++ + E +L+ H N
Sbjct: 36 EDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPN 95
Query: 264 IVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAK-----RVNIV-KAMAHA 317
IVKL ++ ++++ E+ G++ DAV L+ + ++ +V K A
Sbjct: 96 IVKLLDAFYYENNLWILIEFCAGGAV--------DAVMLELERPLTESQIQVVCKQTLDA 147
Query: 318 LAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAP 377
L YLH + IIHRD+ + NIL + +ADFG + R GT ++AP
Sbjct: 148 LNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFIGTPYWMAP 204
Query: 378 ELAYTMVMTE-----KCDVYSFGVVTLEV 401
E+ + K DV+S G+ +E+
Sbjct: 205 EVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 125/305 (40%), Gaps = 58/305 (19%)
Query: 206 DFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNI 264
DF IG+GG+G V+KA+ +GK + ++++ + E A + E + L+++ H NI
Sbjct: 13 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKA-----EREVKALAKLDHVNI 67
Query: 265 VKLYGYCL------------------------------HKKCMFLIYEYMERGSLFCNLH 294
V Y C KC+F+ E+ ++G+L +
Sbjct: 68 VH-YNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIE 126
Query: 295 NNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGT 354
+LD + + + + + Y+H S +IHRD+ +NI L + + DFG
Sbjct: 127 KRR-GEKLDKVLALELFEQITKGVDYIH---SKKLIHRDLKPSNIFLVDTKQVKIGDFGL 182
Query: 355 ARLLHADSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDIXXXX 414
L D RT GT Y++PE + ++ D+Y+ G++ E+L H D
Sbjct: 183 VTSLKND-GKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL---HVCDTAFET 238
Query: 415 XXXXDPKIMLIDVLDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLI 474
D+ D + D+K T+ L P+ RP + + +
Sbjct: 239 SK------FFTDLRDGIISDIFDKKE-------KTLLQKLLSKKPEDRPNTSEILRTLTV 285
Query: 475 TRKTP 479
+K+P
Sbjct: 286 WKKSP 290
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 110/209 (52%), Gaps = 12/209 (5%)
Query: 204 TEDFDIRYCIGTGGYGSVYKA-QLPNGKVFALKKLHTSEELAF-IKSFKNEAQVLSQVLH 261
++++D++ +G G + V + G FA K ++T + A + + EA++ ++ H
Sbjct: 4 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 63
Query: 262 RNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYL 321
NIV+L+ + +L+++ + G LF ++ E E D + + ++ + ++AY
Sbjct: 64 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADAS---HCIQQILESIAYC 120
Query: 322 HHDCSPSIIHRDISSNNILLNSKLEAF---VADFGTARLLHADSSNRTLLAGTYGYIAPE 378
H S I+HR++ N+LL SK + +ADFG A ++ DS AGT GY++PE
Sbjct: 121 H---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN-DSEAWHGFAGTPGYLSPE 176
Query: 379 LAYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
+ ++ D+++ GV+ +L+G P
Sbjct: 177 VLKKDPYSKPVDIWACGVILYILLVGYPP 205
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 97/204 (47%), Gaps = 8/204 (3%)
Query: 205 EDFDIRYCIGTGGYGSVYK-AQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRN 263
+DF+ +G G G V+K + P+G V A K +H + A E QVL +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 264 IVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHH 323
IV YG + + E+M+ GSL L E K V+I A+ L YL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGK-VSI--AVIKGLTYLRE 122
Query: 324 DCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYTM 383
I+HRD+ +NIL+NS+ E + DFG + L +N GT Y++PE
Sbjct: 123 --KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS--FVGTRSYMSPERLQGT 178
Query: 384 VMTEKCDVYSFGVVTLEVLMGKHP 407
+ + D++S G+ +E+ +G++P
Sbjct: 179 HYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 118/288 (40%), Gaps = 29/288 (10%)
Query: 213 IGTGGYGSVYKAQL--PNGKVFALK----KLHTSEELAFIKSFKNEAQVLSQVLHRNIVK 266
+G G +G V + + P+GK ++ K + + F E + + HRN+++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 267 LYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCS 326
LYG L M ++ E GSL L ++ L R + +A + YL S
Sbjct: 80 LYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLE---S 133
Query: 327 PSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGT---YGYIAPELAYTM 383
IHRD+++ N+LL ++ + DFG R L + + + + + APE T
Sbjct: 134 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 193
Query: 384 VMTEKCDVYSFGVVTLEVLM-GKHPRDIXXXXXXXXDPKIMLIDVLDQRLPPPVDRKVIR 442
+ D + FGV E+ G+ P + ID +RLP P D +
Sbjct: 194 TFSHASDTWMFGVTLWEMFTYGQEP-----WIGLNGSQILHKIDKEGERLPRPED--CPQ 246
Query: 443 DILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTPLVKHAAIQDIS 490
DI V C P+ RPT ++ L + T + A+QD
Sbjct: 247 DIY---NVMVQCWAHKPEDRPTFVALRDFLLEAQPTDM---RALQDFE 288
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 111/221 (50%), Gaps = 22/221 (9%)
Query: 202 EATEDFDIRYCIGTGGYGSVYK-AQLPNGKVFALKKLHTS------EELAFIK-SFKNEA 253
E + +D + IG G V + G FA+K + + E+L ++ + + E
Sbjct: 91 EFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRET 150
Query: 254 QVLSQVL-HRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVK 312
+L QV H +I+ L MFL+++ M +G LF L + V L + +I++
Sbjct: 151 HILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYL---TEKVALSEKETRSIMR 207
Query: 313 AMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTY 372
++ A+++LH + +I+HRD+ NILL+ ++ ++DFG + L R L GT
Sbjct: 208 SLLEAVSFLHAN---NIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLRE-LCGTP 263
Query: 373 GYIAPE-LAYTMVMT-----EKCDVYSFGVVTLEVLMGKHP 407
GY+APE L +M T ++ D+++ GV+ +L G P
Sbjct: 264 GYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPP 304
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 97/204 (47%), Gaps = 8/204 (3%)
Query: 205 EDFDIRYCIGTGGYGSVYK-AQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRN 263
+DF+ +G G G V+K + P+G V A K +H + A E QVL +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 264 IVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHH 323
IV YG + + E+M+ GSL L E K V+I A+ L YL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGK-VSI--AVIKGLTYLRE 122
Query: 324 DCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYTM 383
I+HRD+ +NIL+NS+ E + DFG + L +N GT Y++PE
Sbjct: 123 --KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS--FVGTRSYMSPERLQGT 178
Query: 384 VMTEKCDVYSFGVVTLEVLMGKHP 407
+ + D++S G+ +E+ +G++P
Sbjct: 179 HYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 97/204 (47%), Gaps = 8/204 (3%)
Query: 205 EDFDIRYCIGTGGYGSVYK-AQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRN 263
+DF+ +G G G V+K + P+G V A K +H + A E QVL +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 264 IVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHH 323
IV YG + + E+M+ GSL L E K V+I A+ L YL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGK-VSI--AVIKGLTYLRE 122
Query: 324 DCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYTM 383
I+HRD+ +NIL+NS+ E + DFG + L +N GT Y++PE
Sbjct: 123 --KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS--FVGTRSYMSPERLQGT 178
Query: 384 VMTEKCDVYSFGVVTLEVLMGKHP 407
+ + D++S G+ +E+ +G++P
Sbjct: 179 HYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 97/204 (47%), Gaps = 8/204 (3%)
Query: 205 EDFDIRYCIGTGGYGSVYK-AQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRN 263
+DF+ +G G G V+K + P+G V A K +H + A E QVL +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 264 IVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHH 323
IV YG + + E+M+ GSL L E K V+I A+ L YL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGK-VSI--AVIKGLTYLRE 122
Query: 324 DCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYTM 383
I+HRD+ +NIL+NS+ E + DFG + L +N GT Y++PE
Sbjct: 123 --KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS--FVGTRSYMSPERLQGT 178
Query: 384 VMTEKCDVYSFGVVTLEVLMGKHP 407
+ + D++S G+ +E+ +G++P
Sbjct: 179 HYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 99/209 (47%), Gaps = 23/209 (11%)
Query: 205 EDF-DIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRN 263
EDF +I +G G +G VYKAQ V A K+ ++ ++ + E +L+ H N
Sbjct: 36 EDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPN 95
Query: 264 IVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAK-----RVNIV-KAMAHA 317
IVKL ++ ++++ E+ G++ DAV L+ + ++ +V K A
Sbjct: 96 IVKLLDAFYYENNLWILIEFCAGGAV--------DAVMLELERPLTESQIQVVCKQTLDA 147
Query: 318 LAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAP 377
L YLH + IIHRD+ + NIL + +ADFG + R GT ++AP
Sbjct: 148 LNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAP 204
Query: 378 ELAYTMVMTE-----KCDVYSFGVVTLEV 401
E+ + K DV+S G+ +E+
Sbjct: 205 EVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 99/209 (47%), Gaps = 23/209 (11%)
Query: 205 EDF-DIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRN 263
EDF +I +G G +G VYKAQ V A K+ ++ ++ + E +L+ H N
Sbjct: 36 EDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPN 95
Query: 264 IVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAK-----RVNIV-KAMAHA 317
IVKL ++ ++++ E+ G++ DAV L+ + ++ +V K A
Sbjct: 96 IVKLLDAFYYENNLWILIEFCAGGAV--------DAVMLELERPLTESQIQVVCKQTLDA 147
Query: 318 LAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAP 377
L YLH + IIHRD+ + NIL + +ADFG + R GT ++AP
Sbjct: 148 LNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFIGTPYWMAP 204
Query: 378 ELAYTMVMTE-----KCDVYSFGVVTLEV 401
E+ + K DV+S G+ +E+
Sbjct: 205 EVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 97/204 (47%), Gaps = 8/204 (3%)
Query: 205 EDFDIRYCIGTGGYGSVYK-AQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRN 263
+DF+ +G G G V+K + P+G V A K +H + A E QVL +
Sbjct: 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 92
Query: 264 IVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHH 323
IV YG + + E+M+ GSL L E K V+I A+ L YL
Sbjct: 93 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGK-VSI--AVIKGLTYLRE 149
Query: 324 DCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYTM 383
I+HRD+ +NIL+NS+ E + DFG + L +N GT Y++PE
Sbjct: 150 --KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS--FVGTRSYMSPERLQGT 205
Query: 384 VMTEKCDVYSFGVVTLEVLMGKHP 407
+ + D++S G+ +E+ +G++P
Sbjct: 206 HYSVQSDIWSMGLSLVEMAVGRYP 229
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 99/222 (44%), Gaps = 32/222 (14%)
Query: 213 IGTGGYGSVYKAQL-------PNGKV-FALKKLHTSEELAFIKSFKNEAQVLSQV-LHRN 263
+G G +G V A+ PN A+K L + + +E +++ + H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 264 IVKLYGYCLHKKCMFLIYEYMERGSL---------------FCNLHNNEDAVELDWAKRV 308
I+ L G C +++I EY +G+L F HN E+ +L V
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEE--QLSSKDLV 153
Query: 309 NIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLL 368
+ +A + YL S IHRD+++ N+L+ +ADFG AR +H +
Sbjct: 154 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTT 210
Query: 369 AGTY--GYIAPELAYTMVMTEKCDVYSFGVVTLEVL-MGKHP 407
G ++APE + + T + DV+SFGV+ E+ +G P
Sbjct: 211 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 252
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 115/272 (42%), Gaps = 27/272 (9%)
Query: 213 IGTGGYGSVYKAQL--PNGKVFALK----KLHTSEELAFIKSFKNEAQVLSQVLHRNIVK 266
+G G +G V + + P+GK ++ K + + F E + + HRN+++
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 267 LYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCS 326
LYG L M ++ E GSL L ++ L R + +A + YL S
Sbjct: 86 LYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLE---S 139
Query: 327 PSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGT---YGYIAPELAYTM 383
IHRD+++ N+LL ++ + DFG R L + + + + + APE T
Sbjct: 140 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTR 199
Query: 384 VMTEKCDVYSFGVVTLEVLM-GKHPRDIXXXXXXXXDPKIMLIDVLDQRLPPPVDRKVIR 442
+ D + FGV E+ G+ P + ID +RLP P D +
Sbjct: 200 TFSHASDTWMFGVTLWEMFTYGQEP-----WIGLNGSQILHKIDKEGERLPRPED--CPQ 252
Query: 443 DILLISTVSFACLQSNPKSRPTMQSVSQEFLI 474
DI V C P+ RPT ++ ++FL+
Sbjct: 253 DIY---NVMVQCWAHKPEDRPTFVAL-RDFLL 280
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 105/218 (48%), Gaps = 29/218 (13%)
Query: 207 FDIRYCIGTGGYGSVYKAQLPN-GKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLHRN 263
F+I IG G +G V Q + K++A+K ++ + E +++ E Q++ + H
Sbjct: 17 FEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPF 76
Query: 264 IVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNN----EDAVELDWAKRVNIVKAMAHALA 319
+V L+ ++ MF++ + + G L +L N E+ V+L + + AL
Sbjct: 77 LVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKL-------FICELVMALD 129
Query: 320 YLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPEL 379
YL + IIHRD+ +NILL+ + DF A +L ++ T +AGT Y+APE+
Sbjct: 130 YLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQ-ITTMAGTKPYMAPEM 185
Query: 380 -------AYTMVMTEKCDVYSFGVVTLEVLMGKHPRDI 410
Y+ + D +S GV E+L G+ P I
Sbjct: 186 FSSRKGAGYSFAV----DWWSLGVTAYELLRGRRPYHI 219
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 115/272 (42%), Gaps = 27/272 (9%)
Query: 213 IGTGGYGSVYKAQL--PNGKVFALK----KLHTSEELAFIKSFKNEAQVLSQVLHRNIVK 266
+G G +G V + + P+GK ++ K + + F E + + HRN+++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 267 LYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCS 326
LYG L M ++ E GSL L ++ L R + +A + YL S
Sbjct: 76 LYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLE---S 129
Query: 327 PSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGT---YGYIAPELAYTM 383
IHRD+++ N+LL ++ + DFG R L + + + + + APE T
Sbjct: 130 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTR 189
Query: 384 VMTEKCDVYSFGVVTLEVLM-GKHPRDIXXXXXXXXDPKIMLIDVLDQRLPPPVDRKVIR 442
+ D + FGV E+ G+ P + ID +RLP P D +
Sbjct: 190 TFSHASDTWMFGVTLWEMFTYGQEP-----WIGLNGSQILHKIDKEGERLPRPED--CPQ 242
Query: 443 DILLISTVSFACLQSNPKSRPTMQSVSQEFLI 474
DI V C P+ RPT ++ ++FL+
Sbjct: 243 DIY---NVMVQCWAHKPEDRPTFVAL-RDFLL 270
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 102/226 (45%), Gaps = 33/226 (14%)
Query: 212 CIGTGGYGSVYKAQLPNGK------VFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIV 265
+G G +G V KA + K A+K L + + ++ +E VL QV H +++
Sbjct: 30 TLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVI 89
Query: 266 KLYGYCLHKKCMFLIYEYMERGSLFCNLHNNE---------------------DAVELDW 304
KLYG C + LI EY + GSL L + D L
Sbjct: 90 KLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTM 149
Query: 305 AKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSN 364
++ ++ + YL S++HRD+++ NIL+ + ++DFG +R ++ + S
Sbjct: 150 GDLISFAWQISQGMQYL---AEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSX 206
Query: 365 RTLLAGT--YGYIAPELAYTMVMTEKCDVYSFGVVTLEVL-MGKHP 407
G ++A E + + T + DV+SFGV+ E++ +G +P
Sbjct: 207 VKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNP 252
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 103/209 (49%), Gaps = 11/209 (5%)
Query: 204 TEDFDIRYCIGTGGYGSVYKA-QLPNGKVFALKKLHTSEELAFI-KSFKNEAQVLSQVLH 261
T+++ + +G G + V + ++P G+ +A K ++T + A + + EA++ + H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 262 RNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYL 321
NIV+L+ + +L+++ + G LF ED V ++ + + L +
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGELF------EDIVAREYYSEADASHCIQQILESV 116
Query: 322 HHDCSPSIIHRDISSNNILLNSKLEAF---VADFGTARLLHADSSNRTLLAGTYGYIAPE 378
+H I+HRD+ N+LL SK + +ADFG A + D AGT GY++PE
Sbjct: 117 NHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPE 176
Query: 379 LAYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
+ + D+++ GV+ +L+G P
Sbjct: 177 VLRKDPYGKPVDMWACGVILYILLVGYPP 205
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 126/282 (44%), Gaps = 39/282 (13%)
Query: 213 IGTGGYGSVYKA-QLPNGKVF----ALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKL 267
+ +G +G+VYK +P G+ A+K+L + K +EA V++ V + ++ +L
Sbjct: 30 LSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 89
Query: 268 YGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVE----LDWAKRVNIVKAMAHALAYLHH 323
G CL LI + M G L + ++D + L+W V I K M YL
Sbjct: 90 LGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGMN----YLED 142
Query: 324 DCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTY--GYIAPELAY 381
++HRD+++ N+L+ + + DFG A+LL A+ G ++A E
Sbjct: 143 R---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 199
Query: 382 TMVMTEKCDVYSFGVVTLEVL-MGKHPRDIXXXXXXXXDPKIMLIDVLD--QRLP-PPVD 437
+ T + DV+S+GV E++ G P D P + +L+ +RLP PP+
Sbjct: 200 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGI--------PASEISSILEKGERLPQPPI- 250
Query: 438 RKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTP 479
D+ +I C + SRP + + EF + P
Sbjct: 251 --CTIDVYMIMV---KCWMIDADSRPKFRELIIEFSKMARDP 287
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 126/282 (44%), Gaps = 39/282 (13%)
Query: 213 IGTGGYGSVYKA-QLPNGKVF----ALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKL 267
+ +G +G+VYK +P G+ A+K+L + K +EA V++ V + ++ +L
Sbjct: 23 LSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 268 YGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVE----LDWAKRVNIVKAMAHALAYLHH 323
G CL LI + M G L + ++D + L+W V I K M YL
Sbjct: 83 LGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGMN----YLED 135
Query: 324 DCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTY--GYIAPELAY 381
++HRD+++ N+L+ + + DFG A+LL A+ G ++A E
Sbjct: 136 R---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 192
Query: 382 TMVMTEKCDVYSFGVVTLEVL-MGKHPRDIXXXXXXXXDPKIMLIDVLD--QRLP-PPVD 437
+ T + DV+S+GV E++ G P D P + +L+ +RLP PP+
Sbjct: 193 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGI--------PASEISSILEKGERLPQPPI- 243
Query: 438 RKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTP 479
D+ +I C + SRP + + EF + P
Sbjct: 244 --CTIDVYMIMV---KCWMIDADSRPKFRELIIEFSKMARDP 280
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 104/215 (48%), Gaps = 18/215 (8%)
Query: 204 TEDFDIRYCIGTGGYGSVYKAQ-LPNGKVFALKKLHT--SEELAFIKSFKNEAQVLSQVL 260
++ +++ +G GG V+ A+ L + + A+K L + + +F F+ EAQ + +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 261 HRNIVKLYGYCLHKKCM----FLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAH 316
H IV +Y + +++ EY++ +L +H + + + ++
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG---PMTPKRAIEVIADACQ 127
Query: 317 ALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNR----TLLAGTY 372
AL + H + IIHRD+ NI++++ V DFG AR + ADS N + GT
Sbjct: 128 ALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAI-ADSGNSVTQTAAVIGTA 183
Query: 373 GYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
Y++PE A + + DVYS G V EVL G+ P
Sbjct: 184 QYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 104/215 (48%), Gaps = 18/215 (8%)
Query: 204 TEDFDIRYCIGTGGYGSVYKAQ-LPNGKVFALKKLHT--SEELAFIKSFKNEAQVLSQVL 260
++ +++ +G GG V+ A+ L + + A+K L + + +F F+ EAQ + +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 261 HRNIVKLYGYCLHKKCM----FLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAH 316
H IV +Y + +++ EY++ +L +H + + + ++
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG---PMTPKRAIEVIADACQ 127
Query: 317 ALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNR----TLLAGTY 372
AL + H + IIHRD+ NI++++ V DFG AR + ADS N + GT
Sbjct: 128 ALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAI-ADSGNSVTQTAAVIGTA 183
Query: 373 GYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
Y++PE A + + DVYS G V EVL G+ P
Sbjct: 184 QYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 126/282 (44%), Gaps = 39/282 (13%)
Query: 213 IGTGGYGSVYKA-QLPNGKVF----ALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKL 267
+ +G +G+VYK +P G+ A+K+L + K +EA V++ V + ++ +L
Sbjct: 30 LSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 89
Query: 268 YGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVE----LDWAKRVNIVKAMAHALAYLHH 323
G CL LI + M G L + ++D + L+W V I K M YL
Sbjct: 90 LGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGMN----YLED 142
Query: 324 DCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTY--GYIAPELAY 381
++HRD+++ N+L+ + + DFG A+LL A+ G ++A E
Sbjct: 143 R---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 199
Query: 382 TMVMTEKCDVYSFGVVTLEVL-MGKHPRDIXXXXXXXXDPKIMLIDVLD--QRLP-PPVD 437
+ T + DV+S+GV E++ G P D P + +L+ +RLP PP+
Sbjct: 200 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGI--------PASEISSILEKGERLPQPPI- 250
Query: 438 RKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTP 479
D+ +I C + SRP + + EF + P
Sbjct: 251 --CTIDVYMIMV---KCWMIDADSRPKFRELIIEFSKMARDP 287
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 143/327 (43%), Gaps = 38/327 (11%)
Query: 163 LLLAKRKYKKPKLEERATNNID---VFSIWNYDGRIVYEDLIEATEDFDIRYCIGTGGYG 219
L + K +++P+ ++D SI N + + +DL E +G G YG
Sbjct: 13 LKIPKEAFEQPQTSSTPPRDLDSKACISIGNQNFEVKADDLEPIME-------LGRGAYG 65
Query: 220 SVYKAQ-LPNGKVFALKKLHTSEELAFIKSFKNEAQV-LSQVLHRNIVKLYGYCLHKKCM 277
V K + +P+G++ A+K++ + K + + + V V YG + +
Sbjct: 66 VVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDV 125
Query: 278 FLIYEYMERG--SLFCNLHNNEDAVELDWAKR--VNIVKAMAHALAYLHHDCSPSIIHRD 333
++ E M+ + + + + D + V+IVKA+ H + L S+IHRD
Sbjct: 126 WICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL------SVIHRD 179
Query: 334 ISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYTMVMTE----KC 389
+ +N+L+N+ + + DFG + L DS +T+ AG Y+APE + + K
Sbjct: 180 VKPSNVLINALGQVKMCDFGISGYL-VDSVAKTIDAGCKPYMAPERINPELNQKGYSVKS 238
Query: 390 DVYSFGVVTLEVLMGKHPRDIXXXXXXXXDPKIMLIDVLDQRLPP-PVDRKVIRDILLIS 448
D++S G+ +E+ + + P D P L V+++ P P D+ + S
Sbjct: 239 DIWSLGITMIELAILRFPYD------SWGTPFQQLKQVVEEPSPQLPADKFSAEFVDFTS 292
Query: 449 TVSFACLQSNPKSRPTMQSVSQEFLIT 475
CL+ N K RPT + Q T
Sbjct: 293 Q----CLKKNSKERPTYPELMQHPFFT 315
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 115/272 (42%), Gaps = 27/272 (9%)
Query: 213 IGTGGYGSVYKAQL--PNGKVFALK----KLHTSEELAFIKSFKNEAQVLSQVLHRNIVK 266
+G G +G V + + P+GK ++ K + + F E + + HRN+++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 267 LYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCS 326
LYG L M ++ E GSL L ++ L R + +A + YL S
Sbjct: 76 LYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLE---S 129
Query: 327 PSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGT---YGYIAPELAYTM 383
IHRD+++ N+LL ++ + DFG R L + + + + + APE T
Sbjct: 130 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 189
Query: 384 VMTEKCDVYSFGVVTLEVLM-GKHPRDIXXXXXXXXDPKIMLIDVLDQRLPPPVDRKVIR 442
+ D + FGV E+ G+ P + ID +RLP P D +
Sbjct: 190 TFSHASDTWMFGVTLWEMFTYGQEP-----WIGLNGSQILHKIDKEGERLPRPED--CPQ 242
Query: 443 DILLISTVSFACLQSNPKSRPTMQSVSQEFLI 474
DI V C P+ RPT ++ ++FL+
Sbjct: 243 DIY---NVMVQCWAHKPEDRPTFVAL-RDFLL 270
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 126/282 (44%), Gaps = 39/282 (13%)
Query: 213 IGTGGYGSVYKA-QLPNGKVF----ALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKL 267
+G+G +G+VYK +P G+ A+ +L + K +EA V++ V + ++ +L
Sbjct: 57 LGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDNPHVCRL 116
Query: 268 YGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVE----LDWAKRVNIVKAMAHALAYLHH 323
G CL LI + M G L + ++D + L+W V I K M YL
Sbjct: 117 LGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWC--VQIAKGMN----YLED 169
Query: 324 DCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTY--GYIAPELAY 381
++HRD+++ N+L+ + + DFG A+LL A+ G ++A E
Sbjct: 170 R---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 226
Query: 382 TMVMTEKCDVYSFGVVTLEVL-MGKHPRDIXXXXXXXXDPKIMLIDVLD--QRLP-PPVD 437
+ T + DV+S+GV E++ G P D P + +L+ +RLP PP+
Sbjct: 227 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGI--------PASEISSILEKGERLPQPPI- 277
Query: 438 RKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTP 479
D+ +I C + SRP + + EF + P
Sbjct: 278 --CTIDVYMIMV---KCWMIDADSRPKFRELIIEFSKMARDP 314
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 115/272 (42%), Gaps = 27/272 (9%)
Query: 213 IGTGGYGSVYKAQL--PNGKVFALK----KLHTSEELAFIKSFKNEAQVLSQVLHRNIVK 266
+G G +G V + + P+GK ++ K + + F E + + HRN+++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 267 LYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCS 326
LYG L M ++ E GSL L ++ L R + +A + YL S
Sbjct: 76 LYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLE---S 129
Query: 327 PSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGT---YGYIAPELAYTM 383
IHRD+++ N+LL ++ + DFG R L + + + + + APE T
Sbjct: 130 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 189
Query: 384 VMTEKCDVYSFGVVTLEVLM-GKHPRDIXXXXXXXXDPKIMLIDVLDQRLPPPVDRKVIR 442
+ D + FGV E+ G+ P + ID +RLP P D +
Sbjct: 190 TFSHASDTWMFGVTLWEMFTYGQEP-----WIGLNGSQILHKIDKEGERLPRPED--CPQ 242
Query: 443 DILLISTVSFACLQSNPKSRPTMQSVSQEFLI 474
DI V C P+ RPT ++ ++FL+
Sbjct: 243 DIY---NVMVQCWAHKPEDRPTFVAL-RDFLL 270
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 103/209 (49%), Gaps = 11/209 (5%)
Query: 204 TEDFDIRYCIGTGGYGSVYKA-QLPNGKVFALKKLHTSEELAF-IKSFKNEAQVLSQVLH 261
T+++ + +G G + V + ++P G+ +A K ++T + A + + EA++ + H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 262 RNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYL 321
NIV+L+ + +L+++ + G LF ED V ++ + + L +
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGELF------EDIVAREYYSEADASHCIQQILESV 116
Query: 322 HHDCSPSIIHRDISSNNILLNSKLEAF---VADFGTARLLHADSSNRTLLAGTYGYIAPE 378
+H I+HRD+ N+LL SK + +ADFG A + D AGT GY++PE
Sbjct: 117 NHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPE 176
Query: 379 LAYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
+ + D+++ GV+ +L+G P
Sbjct: 177 VLRKDPYGKPVDMWACGVILYILLVGYPP 205
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 123/286 (43%), Gaps = 52/286 (18%)
Query: 213 IGTGGYGSVYKAQLPN-GK-----VFALKKLHTSEELAFIKSFKNEAQVLSQV-LHRNIV 265
+G G +G V +A GK A+K L ++ ++ +E +++S + H NIV
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 266 KLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRV-----------NIVKAM 314
L G C H + +I EY G L L +E D A + + +
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQV 173
Query: 315 AHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGT--- 371
A +A+L S + IHRD+++ N+LL + A + DFG AR + DS+ ++ G
Sbjct: 174 AQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN--YIVKGNARL 228
Query: 372 -YGYIAPELAYTMVMTEKCDVYSFGVVTLEVL-MGKHPRDIXXXXXXXXDPKIM------ 423
++APE + V T + DV+S+G++ E+ +G +P P I+
Sbjct: 229 PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY-----------PGILVNSKFY 277
Query: 424 -LIDVLDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSV 468
L+ Q P K I I+ AC P RPT Q +
Sbjct: 278 KLVKDGYQMAQPAFAPKNIYSIMQ------ACWALEPTHRPTFQQI 317
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 115/272 (42%), Gaps = 27/272 (9%)
Query: 213 IGTGGYGSVYKAQL--PNGKVFALK----KLHTSEELAFIKSFKNEAQVLSQVLHRNIVK 266
+G G +G V + + P+GK ++ K + + F E + + HRN+++
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 267 LYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCS 326
LYG L M ++ E GSL L ++ L R + +A + YL S
Sbjct: 86 LYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLE---S 139
Query: 327 PSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGT---YGYIAPELAYTM 383
IHRD+++ N+LL ++ + DFG R L + + + + + APE T
Sbjct: 140 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 199
Query: 384 VMTEKCDVYSFGVVTLEVLM-GKHPRDIXXXXXXXXDPKIMLIDVLDQRLPPPVDRKVIR 442
+ D + FGV E+ G+ P + ID +RLP P D +
Sbjct: 200 TFSHASDTWMFGVTLWEMFTYGQEP-----WIGLNGSQILHKIDKEGERLPRPED--CPQ 252
Query: 443 DILLISTVSFACLQSNPKSRPTMQSVSQEFLI 474
DI V C P+ RPT ++ ++FL+
Sbjct: 253 DIY---NVMVQCWAHKPEDRPTFVAL-RDFLL 280
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 123/286 (43%), Gaps = 52/286 (18%)
Query: 213 IGTGGYGSVYKAQLPN-GK-----VFALKKLHTSEELAFIKSFKNEAQVLSQV-LHRNIV 265
+G G +G V +A GK A+K L ++ ++ +E +++S + H NIV
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 266 KLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRV-----------NIVKAM 314
L G C H + +I EY G L L +E D A + + +
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQV 173
Query: 315 AHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGT--- 371
A +A+L S + IHRD+++ N+LL + A + DFG AR + DS+ ++ G
Sbjct: 174 AQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN--YIVKGNARL 228
Query: 372 -YGYIAPELAYTMVMTEKCDVYSFGVVTLEVL-MGKHPRDIXXXXXXXXDPKIM------ 423
++APE + V T + DV+S+G++ E+ +G +P P I+
Sbjct: 229 PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY-----------PGILVNSKFY 277
Query: 424 -LIDVLDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSV 468
L+ Q P K I I+ AC P RPT Q +
Sbjct: 278 KLVKDGYQMAQPAFAPKNIYSIMQ------ACWALEPTHRPTFQQI 317
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 115/272 (42%), Gaps = 27/272 (9%)
Query: 213 IGTGGYGSVYKAQL--PNGKVFALK----KLHTSEELAFIKSFKNEAQVLSQVLHRNIVK 266
+G G +G V + + P+GK ++ K + + F E + + HRN+++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 267 LYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCS 326
LYG L M ++ E GSL L ++ L R + +A + YL S
Sbjct: 80 LYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLE---S 133
Query: 327 PSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGT---YGYIAPELAYTM 383
IHRD+++ N+LL ++ + DFG R L + + + + + APE T
Sbjct: 134 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 193
Query: 384 VMTEKCDVYSFGVVTLEVLM-GKHPRDIXXXXXXXXDPKIMLIDVLDQRLPPPVDRKVIR 442
+ D + FGV E+ G+ P + ID +RLP P D +
Sbjct: 194 TFSHASDTWMFGVTLWEMFTYGQEP-----WIGLNGSQILHKIDKEGERLPRPED--CPQ 246
Query: 443 DILLISTVSFACLQSNPKSRPTMQSVSQEFLI 474
DI V C P+ RPT ++ ++FL+
Sbjct: 247 DIY---NVMVQCWAHKPEDRPTFVAL-RDFLL 274
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 92/204 (45%), Gaps = 14/204 (6%)
Query: 213 IGTGGYGSVYKAQL--PNGKVF--ALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLY 268
IG G +G VY L +GK A+K L+ ++ + F E ++ H N++ L
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 96
Query: 269 GYCLHKKCM-FLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSP 327
G CL + ++ YM+ G L + N + + +A + YL S
Sbjct: 97 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKYL---ASK 151
Query: 328 SIIHRDISSNNILLNSKLEAFVADFGTARLLHADSS----NRTLLAGTYGYIAPELAYTM 383
+HRD+++ N +L+ K VADFG AR ++ N+T ++A E T
Sbjct: 152 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQTQ 211
Query: 384 VMTEKCDVYSFGVVTLEVLMGKHP 407
T K DV+SFGV+ E++ P
Sbjct: 212 KFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 92/204 (45%), Gaps = 14/204 (6%)
Query: 213 IGTGGYGSVYKAQL--PNGKVF--ALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLY 268
IG G +G VY L +GK A+K L+ ++ + F E ++ H N++ L
Sbjct: 56 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 115
Query: 269 GYCLHKKCM-FLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSP 327
G CL + ++ YM+ G L + N + + +A + YL S
Sbjct: 116 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKYL---ASK 170
Query: 328 SIIHRDISSNNILLNSKLEAFVADFGTARLLHADS----SNRTLLAGTYGYIAPELAYTM 383
+HRD+++ N +L+ K VADFG AR ++ N+T ++A E T
Sbjct: 171 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQ 230
Query: 384 VMTEKCDVYSFGVVTLEVLMGKHP 407
T K DV+SFGV+ E++ P
Sbjct: 231 KFTTKSDVWSFGVLLWELMTRGAP 254
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 102/205 (49%), Gaps = 14/205 (6%)
Query: 207 FDIRYCIGTGGYGSVY-KAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIV 265
F + +G+G +G V+ + +G +K ++ ++ + E +VL + H NI+
Sbjct: 24 FIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNII 83
Query: 266 KLYGYCLHKKCMFLIYEYMERGSLFCNLHNNE-DAVELDWAKRVNIVKAMAHALAYLHHD 324
K++ M+++ E E G L + + + L ++K M +ALAY H
Sbjct: 84 KIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFH-- 141
Query: 325 CSPSIIHRDISSNNILL-----NSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPEL 379
S ++H+D+ NIL +S ++ + DFG A L +D + T AGT Y+APE+
Sbjct: 142 -SQHVVHKDLKPENILFQDTSPHSPIK--IIDFGLAELFKSD-EHSTNAAGTALYMAPEV 197
Query: 380 AYTMVMTEKCDVYSFGVVTLEVLMG 404
+ +T KCD++S GVV +L G
Sbjct: 198 -FKRDVTFKCDIWSAGVVMYFLLTG 221
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 96/205 (46%), Gaps = 11/205 (5%)
Query: 207 FDIRYCIGTGGYGSVYKAQ-LPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIV 265
F+ + +GTG + V A+ GK+FA+K + S +NE VL ++ H NIV
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIV 83
Query: 266 KLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDC 325
L ++L+ + + G LF + E D + +++ + A+ YLH
Sbjct: 84 ALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDAS---TLIRQVLDAVYYLHR-- 138
Query: 326 SPSIIHRDISSNNILLNSKLEA---FVADFGTARLLHADSSNRTLLAGTYGYIAPELAYT 382
I+HRD+ N+L S+ E ++DFG +++ + GT GY+APE+
Sbjct: 139 -MGIVHRDLKPENLLYYSQDEESKIMISDFGLSKM-EGKGDVMSTACGTPGYVAPEVLAQ 196
Query: 383 MVMTEKCDVYSFGVVTLEVLMGKHP 407
++ D +S GV+ +L G P
Sbjct: 197 KPYSKAVDCWSIGVIAYILLCGYPP 221
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 92/204 (45%), Gaps = 14/204 (6%)
Query: 213 IGTGGYGSVYKAQL--PNGKVF--ALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLY 268
IG G +G VY L +GK A+K L+ ++ + F E ++ H N++ L
Sbjct: 57 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 116
Query: 269 GYCLHKKCM-FLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSP 327
G CL + ++ YM+ G L + N + + +A + YL S
Sbjct: 117 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKYL---ASK 171
Query: 328 SIIHRDISSNNILLNSKLEAFVADFGTARLLHADS----SNRTLLAGTYGYIAPELAYTM 383
+HRD+++ N +L+ K VADFG AR ++ N+T ++A E T
Sbjct: 172 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQ 231
Query: 384 VMTEKCDVYSFGVVTLEVLMGKHP 407
T K DV+SFGV+ E++ P
Sbjct: 232 KFTTKSDVWSFGVLLWELMTRGAP 255
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 94/203 (46%), Gaps = 25/203 (12%)
Query: 213 IGTGGYGSVYKAQ-LPNGKVFALKKLHTSEELAFIKSFK-NEAQVLSQVLHRNIVKLYGY 270
IG G YG V+K + G++ A+KK SE+ IK E ++L Q+ H N+V L
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEV 70
Query: 271 CLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKR---VNIVKAMA----HALAYLH- 322
K+ + L++EY + L ELD +R ++VK++ A+ + H
Sbjct: 71 FRRKRRLHLVFEYCDHTVLH----------ELDRYQRGVPEHLVKSITWQTLQAVNFCHK 120
Query: 323 HDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPE-LAY 381
H+C IHRD+ NIL+ + DFG ARLL S T Y +PE L
Sbjct: 121 HNC----IHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVG 176
Query: 382 TMVMTEKCDVYSFGVVTLEVLMG 404
DV++ G V E+L G
Sbjct: 177 DTQYGPPVDVWAIGCVFAELLSG 199
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 94/202 (46%), Gaps = 16/202 (7%)
Query: 213 IGTGGYGSVY--KAQLPNGKVFALKKLHTSEELAFIKS--FKNEAQVLSQVLHRNIVKLY 268
+G+G YG V K +L G A+K + S S +E VL Q+ H NI+KLY
Sbjct: 29 LGSGAYGEVLLCKDKL-TGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLY 87
Query: 269 GYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPS 328
+ K+ +L+ E G LF + + E+D A I+K + YLH +
Sbjct: 88 EFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAA---VIMKQVLSGTTYLH---KHN 141
Query: 329 IIHRDISSNNILLNSKLEAF---VADFGTARLLHADSSNRTLLAGTYGYIAPELAYTMVM 385
I+HRD+ N+LL SK + DFG + + L Y YIAPE+
Sbjct: 142 IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAY-YIAPEVLRKK-Y 199
Query: 386 TEKCDVYSFGVVTLEVLMGKHP 407
EKCDV+S GV+ +L G P
Sbjct: 200 DEKCDVWSCGVILYILLCGYPP 221
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 92/204 (45%), Gaps = 14/204 (6%)
Query: 213 IGTGGYGSVYKAQL--PNGKVF--ALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLY 268
IG G +G VY L +GK A+K L+ ++ + F E ++ H N++ L
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 269 GYCLHKKCM-FLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSP 327
G CL + ++ YM+ G L + N + + +A + YL S
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKYL---ASK 152
Query: 328 SIIHRDISSNNILLNSKLEAFVADFGTARLLHADS----SNRTLLAGTYGYIAPELAYTM 383
+HRD+++ N +L+ K VADFG AR ++ N+T ++A E T
Sbjct: 153 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQ 212
Query: 384 VMTEKCDVYSFGVVTLEVLMGKHP 407
T K DV+SFGV+ E++ P
Sbjct: 213 KFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 96/203 (47%), Gaps = 19/203 (9%)
Query: 213 IGTGGYGSVYKAQLPNGKVFALKKL-----HTSEELAFIKSFKNEAQVLSQVLHRNIVKL 267
+G+G YG V L KV +++ TS + E VL + H NI+KL
Sbjct: 45 LGSGAYGEVL---LCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKL 101
Query: 268 YGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSP 327
Y + K+ +L+ E + G LF + + E+D A I+K + + YLH
Sbjct: 102 YDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAV---IIKQVLSGVTYLH---KH 155
Query: 328 SIIHRDISSNNILLNSKLEAF---VADFGTARLLHADSSNRTLLAGTYGYIAPELAYTMV 384
+I+HRD+ N+LL SK + + DFG + + + L GT YIAPE+
Sbjct: 156 NIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERL-GTAYYIAPEVLRKKY 214
Query: 385 MTEKCDVYSFGVVTLEVLMGKHP 407
EKCDV+S GV+ +L G P
Sbjct: 215 -DEKCDVWSIGVILFILLAGYPP 236
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 92/204 (45%), Gaps = 14/204 (6%)
Query: 213 IGTGGYGSVYKAQL--PNGKVF--ALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLY 268
IG G +G VY L +GK A+K L+ ++ + F E ++ H N++ L
Sbjct: 30 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 89
Query: 269 GYCLHKKCM-FLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSP 327
G CL + ++ YM+ G L + N + + +A + YL S
Sbjct: 90 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKYL---ASK 144
Query: 328 SIIHRDISSNNILLNSKLEAFVADFGTARLLHADS----SNRTLLAGTYGYIAPELAYTM 383
+HRD+++ N +L+ K VADFG AR ++ N+T ++A E T
Sbjct: 145 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQ 204
Query: 384 VMTEKCDVYSFGVVTLEVLMGKHP 407
T K DV+SFGV+ E++ P
Sbjct: 205 KFTTKSDVWSFGVLLWELMTRGAP 228
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 92/204 (45%), Gaps = 14/204 (6%)
Query: 213 IGTGGYGSVYKAQL--PNGKVF--ALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLY 268
IG G +G VY L +GK A+K L+ ++ + F E ++ H N++ L
Sbjct: 35 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 94
Query: 269 GYCLHKKCM-FLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSP 327
G CL + ++ YM+ G L + N + + +A + YL S
Sbjct: 95 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKYL---ASK 149
Query: 328 SIIHRDISSNNILLNSKLEAFVADFGTARLLHADS----SNRTLLAGTYGYIAPELAYTM 383
+HRD+++ N +L+ K VADFG AR ++ N+T ++A E T
Sbjct: 150 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQ 209
Query: 384 VMTEKCDVYSFGVVTLEVLMGKHP 407
T K DV+SFGV+ E++ P
Sbjct: 210 KFTTKSDVWSFGVLLWELMTRGAP 233
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 103/216 (47%), Gaps = 46/216 (21%)
Query: 216 GGYGSVYKAQLPNG----KVFALKKLHTSEELAFIKSFKNEAQVLSQ--VLHRNIVKL-- 267
G +G V+KAQL N K+F L+ +S+++E ++ S + H N+++
Sbjct: 26 GRFGCVWKAQLMNDFVAVKIFPLQDK---------QSWQSEREIFSTPGMKHENLLQFIA 76
Query: 268 ---YGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHD 324
G L + ++LI + ++GSL L N + W + ++ + M+ L+YLH D
Sbjct: 77 AEKRGSNLEVE-LWLITAFHDKGSLTDYLKGNI----ITWNELCHVAETMSRGLSYLHED 131
Query: 325 C--------SPSIIHRDISSNNILLNSKLEAFVADFGTARLLH-----ADSSNRTLLAGT 371
PSI HRD S N+LL S L A +ADFG A D+ + GT
Sbjct: 132 VPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQV---GT 188
Query: 372 YGYIAPELAYTMVMTE-----KCDVYSFGVVTLEVL 402
Y+APE+ + + + D+Y+ G+V E++
Sbjct: 189 RRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELV 224
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 92/204 (45%), Gaps = 14/204 (6%)
Query: 213 IGTGGYGSVYKAQL--PNGKVF--ALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLY 268
IG G +G VY L +GK A+K L+ ++ + F E ++ H N++ L
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 269 GYCLHKKCM-FLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSP 327
G CL + ++ YM+ G L + N + + +A + YL S
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKYL---ASK 152
Query: 328 SIIHRDISSNNILLNSKLEAFVADFGTARLLHADS----SNRTLLAGTYGYIAPELAYTM 383
+HRD+++ N +L+ K VADFG AR ++ N+T ++A E T
Sbjct: 153 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQ 212
Query: 384 VMTEKCDVYSFGVVTLEVLMGKHP 407
T K DV+SFGV+ E++ P
Sbjct: 213 KFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 94/211 (44%), Gaps = 17/211 (8%)
Query: 205 EDFDIRYCIGTGGYGSVYKA-QLPNGKVFALKKLHTSEELAFIKSFK-----NEAQVLSQ 258
EDF +G G + +V A +L + +A+K L E+ IK K E V+S+
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKIL---EKRHIIKENKVPYVTRERDVMSR 88
Query: 259 VLHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHAL 318
+ H VKLY + ++ Y + G C L D + AL
Sbjct: 89 LDHPFFVKLYFTFQDDEKLYFGLSYAKNG---CLLKYIRKIGSFDETCTRFYTAEIVSAL 145
Query: 319 AYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADS--SNRTLLAGTYGYIA 376
YLH IIHRD+ NILLN + + DFGTA++L +S + GT Y++
Sbjct: 146 EYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVS 202
Query: 377 PELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
PEL ++ D+++ G + +++ G P
Sbjct: 203 PELLTEKSASKSSDLWALGCIIYQLVAGLPP 233
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 101/226 (44%), Gaps = 33/226 (14%)
Query: 212 CIGTGGYGSVYKAQLPNGK------VFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIV 265
+G G +G V KA + K A+K L + + ++ +E VL QV H +++
Sbjct: 30 TLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVI 89
Query: 266 KLYGYCLHKKCMFLIYEYMERGSLFCNLHNNE---------------------DAVELDW 304
KLYG C + LI EY + GSL L + D L
Sbjct: 90 KLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTM 149
Query: 305 AKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSN 364
++ ++ + YL ++HRD+++ NIL+ + ++DFG +R ++ + S
Sbjct: 150 GDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSX 206
Query: 365 RTLLAGT--YGYIAPELAYTMVMTEKCDVYSFGVVTLEVL-MGKHP 407
G ++A E + + T + DV+SFGV+ E++ +G +P
Sbjct: 207 VKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNP 252
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 92/204 (45%), Gaps = 14/204 (6%)
Query: 213 IGTGGYGSVYKAQL--PNGKVF--ALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLY 268
IG G +G VY L +GK A+K L+ ++ + F E ++ H N++ L
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 95
Query: 269 GYCLHKKCM-FLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSP 327
G CL + ++ YM+ G L + N + + +A + YL S
Sbjct: 96 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKYL---ASK 150
Query: 328 SIIHRDISSNNILLNSKLEAFVADFGTARLLHADS----SNRTLLAGTYGYIAPELAYTM 383
+HRD+++ N +L+ K VADFG AR ++ N+T ++A E T
Sbjct: 151 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQ 210
Query: 384 VMTEKCDVYSFGVVTLEVLMGKHP 407
T K DV+SFGV+ E++ P
Sbjct: 211 KFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 92/204 (45%), Gaps = 14/204 (6%)
Query: 213 IGTGGYGSVYKAQL--PNGKVF--ALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLY 268
IG G +G VY L +GK A+K L+ ++ + F E ++ H N++ L
Sbjct: 33 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 92
Query: 269 GYCLHKKCM-FLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSP 327
G CL + ++ YM+ G L + N + + +A + YL S
Sbjct: 93 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKYL---ASK 147
Query: 328 SIIHRDISSNNILLNSKLEAFVADFGTARLLHADS----SNRTLLAGTYGYIAPELAYTM 383
+HRD+++ N +L+ K VADFG AR ++ N+T ++A E T
Sbjct: 148 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQ 207
Query: 384 VMTEKCDVYSFGVVTLEVLMGKHP 407
T K DV+SFGV+ E++ P
Sbjct: 208 KFTTKSDVWSFGVLLWELMTRGAP 231
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 92/204 (45%), Gaps = 14/204 (6%)
Query: 213 IGTGGYGSVYKAQL--PNGKVF--ALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLY 268
IG G +G VY L +GK A+K L+ ++ + F E ++ H N++ L
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 96
Query: 269 GYCLHKKCM-FLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSP 327
G CL + ++ YM+ G L + N + + +A + YL S
Sbjct: 97 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKYL---ASK 151
Query: 328 SIIHRDISSNNILLNSKLEAFVADFGTARLLHADS----SNRTLLAGTYGYIAPELAYTM 383
+HRD+++ N +L+ K VADFG AR ++ N+T ++A E T
Sbjct: 152 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQ 211
Query: 384 VMTEKCDVYSFGVVTLEVLMGKHP 407
T K DV+SFGV+ E++ P
Sbjct: 212 KFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 94/202 (46%), Gaps = 16/202 (7%)
Query: 213 IGTGGYGSVY--KAQLPNGKVFALKKLHTSEELAFIKS--FKNEAQVLSQVLHRNIVKLY 268
+G+G YG V K +L G A+K + S S +E VL Q+ H NI+KLY
Sbjct: 12 LGSGAYGEVLLCKDKL-TGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLY 70
Query: 269 GYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPS 328
+ K+ +L+ E G LF + + E+D A I+K + YLH +
Sbjct: 71 EFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAA---VIMKQVLSGTTYLH---KHN 124
Query: 329 IIHRDISSNNILLNSKLEAF---VADFGTARLLHADSSNRTLLAGTYGYIAPELAYTMVM 385
I+HRD+ N+LL SK + DFG + + L Y YIAPE+
Sbjct: 125 IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAY-YIAPEVLRKK-Y 182
Query: 386 TEKCDVYSFGVVTLEVLMGKHP 407
EKCDV+S GV+ +L G P
Sbjct: 183 DEKCDVWSCGVILYILLCGYPP 204
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 103/215 (47%), Gaps = 18/215 (8%)
Query: 204 TEDFDIRYCIGTGGYGSVYKAQ-LPNGKVFALKKLHT--SEELAFIKSFKNEAQVLSQVL 260
++ +++ +G GG V+ A+ L + A+K L + + +F F+ EAQ + +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 261 HRNIVKLYGYCLHKKCM----FLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAH 316
H IV +Y + +++ EY++ +L +H + + + ++
Sbjct: 71 HPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG---PMTPKRAIEVIADACQ 127
Query: 317 ALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNR----TLLAGTY 372
AL + H + IIHRD+ NI++++ V DFG AR + ADS N + GT
Sbjct: 128 ALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAI-ADSGNSVTQTAAVIGTA 183
Query: 373 GYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
Y++PE A + + DVYS G V EVL G+ P
Sbjct: 184 QYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 99/208 (47%), Gaps = 16/208 (7%)
Query: 202 EATEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFK-NEAQVLSQV 259
E E+F IG G YG VYKA+ G+V ALKK+ E + S E +L ++
Sbjct: 7 EFMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 66
Query: 260 LHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKA----MA 315
H NIVKL + ++L++E++ + +L DA L + ++K+ +
Sbjct: 67 NHPNIVKLLDVIHTENKLYLVFEFLHQ-----DLKKFMDASALT-GIPLPLIKSYLFQLL 120
Query: 316 HALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYI 375
LA+ H S ++HRD+ N+L+N++ +ADFG AR T T Y
Sbjct: 121 QGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYR 177
Query: 376 APE-LAYTMVMTEKCDVYSFGVVTLEVL 402
APE L + D++S G + E++
Sbjct: 178 APEILLGXKYYSTAVDIWSLGCIFAEMV 205
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 101/208 (48%), Gaps = 15/208 (7%)
Query: 207 FDIRYCIGTGGYGSVYKAQLPNG----KVFALK--KLHTSEELAFIKSFKNEAQVLSQVL 260
F++ +G G +G V+ + +G +++A+K K T + +++ K E +L +V
Sbjct: 26 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRT-KMERDILVEVN 84
Query: 261 HRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKA-MAHALA 319
H IVKL+ + ++LI +++ G LF L E D V A +A AL
Sbjct: 85 HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEED----VKFYLAELALALD 140
Query: 320 YLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPEL 379
+LH S II+RD+ NILL+ + + DFG ++ GT Y+APE+
Sbjct: 141 HLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEV 197
Query: 380 AYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
T+ D +SFGV+ E+L G P
Sbjct: 198 VNRRGHTQSADWWSFGVLMFEMLTGTLP 225
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 100/209 (47%), Gaps = 11/209 (5%)
Query: 204 TEDFDIRYCIGTGGYGSVYKA-QLPNGKVFALKKLHTSEELAF-IKSFKNEAQVLSQVLH 261
T+++ + IG G + V + +L G +A K ++T + A + + EA++ + H
Sbjct: 3 TDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 262 RNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYL 321
NIV+L+ + +L+++ + G LF ED V ++ + + L +
Sbjct: 63 SNIVRLHDSISEEGFHYLVFDLVTGGELF------EDIVAREYYSEADASHCIQQILEAV 116
Query: 322 HHDCSPSIIHRDISSNNILLNSKLEAF---VADFGTARLLHADSSNRTLLAGTYGYIAPE 378
H ++HRD+ N+LL SK + +ADFG A + D AGT GY++PE
Sbjct: 117 LHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPE 176
Query: 379 LAYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
+ + D+++ GV+ +L+G P
Sbjct: 177 VLRKEAYGKPVDIWACGVILYILLVGYPP 205
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 97/215 (45%), Gaps = 25/215 (11%)
Query: 205 EDFDIRYCIGTGGYGSVYKA-QLPNGKVFALKKLHTSEELAFIKSFK-----NEAQVLSQ 258
EDF +G G + +V A +L + +A+K L E+ IK K E V+S+
Sbjct: 10 EDFKFGKILGEGSFSTVVLARELATSREYAIKIL---EKRHIIKENKVPYVTRERDVMSR 66
Query: 259 VLHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHN----NEDAVELDWAKRVNIVKAM 314
+ H VKLY + ++ Y + G L + +E A+ V+
Sbjct: 67 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVS----- 121
Query: 315 AHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADS--SNRTLLAGTY 372
AL YLH IIHRD+ NILLN + + DFGTA++L +S + GT
Sbjct: 122 --ALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 176
Query: 373 GYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
Y++PEL + D+++ G + +++ G P
Sbjct: 177 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 211
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 102/226 (45%), Gaps = 33/226 (14%)
Query: 212 CIGTGGYGSVYKAQLPNGK------VFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIV 265
+G G +G V KA + K A+K L + + ++ +E VL QV H +++
Sbjct: 30 TLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVI 89
Query: 266 KLYGYCLHKKCMFLIYEYMERGSLFCNLHNNE---------------------DAVELDW 304
KLYG C + LI EY + GSL L + D L
Sbjct: 90 KLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTM 149
Query: 305 AKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSS- 363
++ ++ + YL ++HRD+++ NIL+ + ++DFG +R ++ + S
Sbjct: 150 GDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSY 206
Query: 364 -NRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVL-MGKHP 407
R+ ++A E + + T + DV+SFGV+ E++ +G +P
Sbjct: 207 VKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNP 252
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 99/211 (46%), Gaps = 20/211 (9%)
Query: 206 DFDIRYCIGTGGYGSVYKAQLPNGKVF-ALKKLHTSEELAFIKSFKNEAQVLSQ--VLHR 262
DF IG G +G V A+ +VF A+K L ++ A +K K E ++S+ VL +
Sbjct: 39 DFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVL---QKKAILKK-KEEKHIMSERNVLLK 94
Query: 263 NIVKLYGYCLH-----KKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKA-MAH 316
N+ + LH ++ + +Y+ G LF +L +E R A +A
Sbjct: 95 NVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLE----PRARFYAAEIAS 150
Query: 317 ALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIA 376
AL YLH S +I++RD+ NILL+S+ + DFG + +S + GT Y+A
Sbjct: 151 ALGYLH---SLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLA 207
Query: 377 PELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
PE+ + D + G V E+L G P
Sbjct: 208 PEVLHKQPYDRTVDWWCLGAVLYEMLYGLPP 238
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 97/215 (45%), Gaps = 25/215 (11%)
Query: 205 EDFDIRYCIGTGGYGSVYKA-QLPNGKVFALKKLHTSEELAFIKSFK-----NEAQVLSQ 258
EDF +G G + +V A +L + +A+K L E+ IK K E V+S+
Sbjct: 9 EDFKFGKILGEGSFSTVVLARELATSREYAIKIL---EKRHIIKENKVPYVTRERDVMSR 65
Query: 259 VLHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHN----NEDAVELDWAKRVNIVKAM 314
+ H VKLY + ++ Y + G L + +E A+ V+
Sbjct: 66 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVS----- 120
Query: 315 AHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADS--SNRTLLAGTY 372
AL YLH IIHRD+ NILLN + + DFGTA++L +S + GT
Sbjct: 121 --ALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 175
Query: 373 GYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
Y++PEL + D+++ G + +++ G P
Sbjct: 176 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 210
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 99/207 (47%), Gaps = 13/207 (6%)
Query: 207 FDIRYCIGTGGYGSVYKAQLPNG----KVFALKKLHTSE-ELAFIKSFKNEAQVLSQVLH 261
F++ +G G +G V+ + +G +++A+K L + ++ K E +L +V H
Sbjct: 26 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNH 85
Query: 262 RNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKA-MAHALAY 320
IVKL+ + ++LI +++ G LF L E D V A +A AL +
Sbjct: 86 PFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEED----VKFYLAELALALDH 141
Query: 321 LHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELA 380
LH S II+RD+ NILL+ + + DFG ++ GT Y+APE+
Sbjct: 142 LH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVV 198
Query: 381 YTMVMTEKCDVYSFGVVTLEVLMGKHP 407
T+ D +SFGV+ E+L G P
Sbjct: 199 NRRGHTQSADWWSFGVLMFEMLTGTLP 225
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 99/207 (47%), Gaps = 13/207 (6%)
Query: 207 FDIRYCIGTGGYGSVYKAQLPNG----KVFALKKLHTSE-ELAFIKSFKNEAQVLSQVLH 261
F++ +G G +G V+ + +G +++A+K L + ++ K E +L +V H
Sbjct: 27 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNH 86
Query: 262 RNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKA-MAHALAY 320
IVKL+ + ++LI +++ G LF L E D V A +A AL +
Sbjct: 87 PFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEED----VKFYLAELALALDH 142
Query: 321 LHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELA 380
LH S II+RD+ NILL+ + + DFG ++ GT Y+APE+
Sbjct: 143 LH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVV 199
Query: 381 YTMVMTEKCDVYSFGVVTLEVLMGKHP 407
T+ D +SFGV+ E+L G P
Sbjct: 200 NRRGHTQSADWWSFGVLMFEMLTGTLP 226
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 125/292 (42%), Gaps = 32/292 (10%)
Query: 205 EDFDIRYCIGTGGYGSVYKA-QLPNGKVFALKKLHTSEELAFIKSFK-----NEAQVLSQ 258
EDF +G G + +V A +L + +A+K L E+ IK K E V+S+
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKIL---EKRHIIKENKVPYVTRERDVMSR 88
Query: 259 VLHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHN----NEDAVELDWAKRVNIVKAM 314
+ H VKLY + ++ Y + G L + +E A+ V+
Sbjct: 89 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVS----- 143
Query: 315 AHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADS--SNRTLLAGTY 372
AL YLH IIHRD+ NILLN + + DFGTA++L +S + GT
Sbjct: 144 --ALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 198
Query: 373 GYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDIXXXXXXXXDPKIMLIDV-LDQR 431
Y++PEL + D+++ G + +++ G P KI+ ++ ++
Sbjct: 199 QYVSPELLTEKSAXKSSDLWALGCIIYQLVAGLPP--FRAGNEGLIFAKIIKLEYDFPEK 256
Query: 432 LPPPVDRKVIRDILLISTVSFACLQSNP----KSRPTMQSVSQEFLITRKTP 479
P V + ++L +T C + K+ P +SV+ E L + P
Sbjct: 257 FFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPP 308
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 98/203 (48%), Gaps = 20/203 (9%)
Query: 213 IGTGGYGSVYKAQ-LPNGKVFALKKLHTSEELAFIK--SFKNEAQVLSQVLHRNIVKLYG 269
IG G +G+VY A+ + N +V A+KK+ S + + K E + L ++ H N ++ G
Sbjct: 62 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 121
Query: 270 YCLHKKCMFLIYEY-MERGSLFCNLHNNE-DAVELDWAKRVNIVKAMAHALAYLHHDCSP 327
L + +L+ EY + S +H VE+ + LAYLH S
Sbjct: 122 CYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEI-----AAVTHGALQGLAYLH---SH 173
Query: 328 SIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYTMVMTE 387
++IHRD+ + NILL+ + DFG+A ++ + GT ++APE+ M +
Sbjct: 174 NMIHRDVKAGNILLSEPGLVKLGDFGSASIM----APANXFVGTPYWMAPEVILAMDEGQ 229
Query: 388 ---KCDVYSFGVVTLEVLMGKHP 407
K DV+S G+ +E+ K P
Sbjct: 230 YDGKVDVWSLGITCIELAERKPP 252
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 100/222 (45%), Gaps = 32/222 (14%)
Query: 213 IGTGGYGSVYKAQL-------PNGKV-FALKKLHTSEELAFIKSFKNEAQVLSQV-LHRN 263
+G G +G V A+ PN A+K L + + +E +++ + H+N
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 264 IVKLYGYCLHKKCMFLIYEYMERGSL-------------FC--NLHNNEDAVELDWAKRV 308
I+ L G C +++I EY +G+L +C HN E+ +L V
Sbjct: 81 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEE--QLSSKDLV 138
Query: 309 NIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLL 368
+ +A + YL S IHRD+++ N+L+ +ADFG AR +H +
Sbjct: 139 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 195
Query: 369 AGTY--GYIAPELAYTMVMTEKCDVYSFGVVTLEVL-MGKHP 407
G ++APE + + T + DV+SFGV+ E+ +G P
Sbjct: 196 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 237
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 127/293 (43%), Gaps = 34/293 (11%)
Query: 205 EDFDIRYCIGTGGYGSVYKA-QLPNGKVFALKKLHTSEELAFIKSFK-----NEAQVLSQ 258
EDF +G G + +V A +L + +A+K L E+ IK K E V+S+
Sbjct: 37 EDFKFGKILGEGSFSTVVLARELATSREYAIKIL---EKRHIIKENKVPYVTRERDVMSR 93
Query: 259 VLHRNIVKLYGYCLHK-KCMFLIYEYMERGSLFCNLHN----NEDAVELDWAKRVNIVKA 313
+ H VKLY +C + ++ Y + G L + +E A+ V+
Sbjct: 94 LDHPFFVKLY-FCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVS---- 148
Query: 314 MAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADS--SNRTLLAGT 371
AL YLH IIHRD+ NILLN + + DFGTA++L +S + GT
Sbjct: 149 ---ALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 202
Query: 372 YGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDIXXXXXXXXDPKIMLIDV-LDQ 430
Y++PEL + D+++ G + +++ G P KI+ ++ +
Sbjct: 203 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP--FRAGNEYLIFQKIIKLEYDFPE 260
Query: 431 RLPPPVDRKVIRDILLISTVSFACLQSNP----KSRPTMQSVSQEFLITRKTP 479
+ P V + ++L +T C + K+ P +SV+ E L + P
Sbjct: 261 KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPP 313
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 99/208 (47%), Gaps = 16/208 (7%)
Query: 202 EATEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFK-NEAQVLSQV 259
E E+F IG G YG VYKA+ G+V ALKK+ E + S E +L ++
Sbjct: 7 EFMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 66
Query: 260 LHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKA----MA 315
H NIVKL + ++L++E++ + +L DA L + ++K+ +
Sbjct: 67 NHPNIVKLLDVIHTENKLYLVFEFLHQ-----DLKKFMDASALT-GIPLPLIKSYLFQLL 120
Query: 316 HALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYI 375
LA+ H S ++HRD+ N+L+N++ +ADFG AR T T Y
Sbjct: 121 QGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYR 177
Query: 376 APE-LAYTMVMTEKCDVYSFGVVTLEVL 402
APE L + D++S G + E++
Sbjct: 178 APEILLGCKYYSTAVDIWSLGCIFAEMV 205
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 97/215 (45%), Gaps = 25/215 (11%)
Query: 205 EDFDIRYCIGTGGYGSVYKA-QLPNGKVFALKKLHTSEELAFIKSFK-----NEAQVLSQ 258
EDF +G G + +V A +L + +A+K L E+ IK K E V+S+
Sbjct: 8 EDFKFGKILGEGSFSTVVLARELATSREYAIKIL---EKRHIIKENKVPYVTRERDVMSR 64
Query: 259 VLHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHN----NEDAVELDWAKRVNIVKAM 314
+ H VKLY + ++ Y + G L + +E A+ V+
Sbjct: 65 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVS----- 119
Query: 315 AHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADS--SNRTLLAGTY 372
AL YLH IIHRD+ NILLN + + DFGTA++L +S + GT
Sbjct: 120 --ALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 174
Query: 373 GYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
Y++PEL + D+++ G + +++ G P
Sbjct: 175 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 209
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 97/215 (45%), Gaps = 25/215 (11%)
Query: 205 EDFDIRYCIGTGGYGSVYKA-QLPNGKVFALKKLHTSEELAFIKSFK-----NEAQVLSQ 258
EDF +G G + +V A +L + +A+K L E+ IK K E V+S+
Sbjct: 7 EDFKFGKILGEGSFSTVVLARELATSREYAIKIL---EKRHIIKENKVPYVTRERDVMSR 63
Query: 259 VLHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHN----NEDAVELDWAKRVNIVKAM 314
+ H VKLY + ++ Y + G L + +E A+ V+
Sbjct: 64 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVS----- 118
Query: 315 AHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADS--SNRTLLAGTY 372
AL YLH IIHRD+ NILLN + + DFGTA++L +S + GT
Sbjct: 119 --ALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 173
Query: 373 GYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
Y++PEL + D+++ G + +++ G P
Sbjct: 174 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 208
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 125/292 (42%), Gaps = 32/292 (10%)
Query: 205 EDFDIRYCIGTGGYGSVYKA-QLPNGKVFALKKLHTSEELAFIKSFK-----NEAQVLSQ 258
EDF +G G + +V A +L + +A+K L E+ IK K E V+S+
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKIL---EKRHIIKENKVPYVTRERDVMSR 88
Query: 259 VLHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHN----NEDAVELDWAKRVNIVKAM 314
+ H VKLY + ++ Y + G L + +E A+ V+
Sbjct: 89 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVS----- 143
Query: 315 AHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADS--SNRTLLAGTY 372
AL YLH IIHRD+ NILLN + + DFGTA++L +S + GT
Sbjct: 144 --ALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 198
Query: 373 GYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDIXXXXXXXXDPKIMLIDV-LDQR 431
Y++PEL + D+++ G + +++ G P KI+ ++ ++
Sbjct: 199 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP--FRAGNEGLIFAKIIKLEYDFPEK 256
Query: 432 LPPPVDRKVIRDILLISTVSFACLQSNP----KSRPTMQSVSQEFLITRKTP 479
P V + ++L +T C + K+ P +SV+ E L + P
Sbjct: 257 FFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPP 308
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 125/292 (42%), Gaps = 32/292 (10%)
Query: 205 EDFDIRYCIGTGGYGSVYKA-QLPNGKVFALKKLHTSEELAFIKSFK-----NEAQVLSQ 258
EDF +G G + +V A +L + +A+K L E+ IK K E V+S+
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKIL---EKRHIIKENKVPYVTRERDVMSR 88
Query: 259 VLHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHN----NEDAVELDWAKRVNIVKAM 314
+ H VKLY + ++ Y + G L + +E A+ V+
Sbjct: 89 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVS----- 143
Query: 315 AHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADS--SNRTLLAGTY 372
AL YLH IIHRD+ NILLN + + DFGTA++L +S + GT
Sbjct: 144 --ALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 198
Query: 373 GYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDIXXXXXXXXDPKIMLIDV-LDQR 431
Y++PEL + D+++ G + +++ G P KI+ ++ ++
Sbjct: 199 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP--FRAGNEYLIFQKIIKLEYDFPEK 256
Query: 432 LPPPVDRKVIRDILLISTVSFACLQSNP----KSRPTMQSVSQEFLITRKTP 479
P V + ++L +T C + K+ P +SV+ E L + P
Sbjct: 257 FFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPP 308
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 100/222 (45%), Gaps = 32/222 (14%)
Query: 213 IGTGGYGSVYKAQL-------PNGKV-FALKKLHTSEELAFIKSFKNEAQVLSQV-LHRN 263
+G G +G V A+ PN A+K L + + +E +++ + H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 264 IVKLYGYCLHKKCMFLIYEYMERGSL-------------FCN--LHNNEDAVELDWAKRV 308
I+ L G C +++I EY +G+L +C HN E+ +L V
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEE--QLSSKDLV 153
Query: 309 NIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLL 368
+ +A + YL S IHRD+++ N+L+ +ADFG AR +H +
Sbjct: 154 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 210
Query: 369 AGTY--GYIAPELAYTMVMTEKCDVYSFGVVTLEVL-MGKHP 407
G ++APE + + T + DV+SFGV+ E+ +G P
Sbjct: 211 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 252
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 125/292 (42%), Gaps = 32/292 (10%)
Query: 205 EDFDIRYCIGTGGYGSVYKA-QLPNGKVFALKKLHTSEELAFIKSFK-----NEAQVLSQ 258
EDF +G G + +V A +L + +A+K L E+ IK K E V+S+
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKIL---EKRHIIKENKVPYVTRERDVMSR 89
Query: 259 VLHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHN----NEDAVELDWAKRVNIVKAM 314
+ H VKLY + ++ Y + G L + +E A+ V+
Sbjct: 90 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVS----- 144
Query: 315 AHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADS--SNRTLLAGTY 372
AL YLH IIHRD+ NILLN + + DFGTA++L +S + GT
Sbjct: 145 --ALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 199
Query: 373 GYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDIXXXXXXXXDPKIMLIDV-LDQR 431
Y++PEL + D+++ G + +++ G P KI+ ++ ++
Sbjct: 200 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP--FRAGNEYLIFQKIIKLEYDFPEK 257
Query: 432 LPPPVDRKVIRDILLISTVSFACLQSNP----KSRPTMQSVSQEFLITRKTP 479
P V + ++L +T C + K+ P +SV+ E L + P
Sbjct: 258 FFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPP 309
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 103/215 (47%), Gaps = 18/215 (8%)
Query: 204 TEDFDIRYCIGTGGYGSVYKAQ-LPNGKVFALKKLHT--SEELAFIKSFKNEAQVLSQVL 260
++ +++ +G GG V+ A+ L + A+K L + + +F F+ EAQ + +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 261 HRNIVKLYGYCLHKKCM----FLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAH 316
H IV +Y + +++ EY++ +L +H + + + ++
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG---PMTPKRAIEVIADACQ 127
Query: 317 ALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNR----TLLAGTY 372
AL + H + IIHRD+ NI++++ V DFG AR + ADS N + GT
Sbjct: 128 ALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAI-ADSGNSVTQTAAVIGTA 183
Query: 373 GYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
Y++PE A + + DVYS G V EVL G+ P
Sbjct: 184 QYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 125/292 (42%), Gaps = 32/292 (10%)
Query: 205 EDFDIRYCIGTGGYGSVYKA-QLPNGKVFALKKLHTSEELAFIKSFK-----NEAQVLSQ 258
EDF +G G + +V A +L + +A+K L E+ IK K E V+S+
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKIL---EKRHIIKENKVPYVTRERDVMSR 86
Query: 259 VLHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHN----NEDAVELDWAKRVNIVKAM 314
+ H VKLY + ++ Y + G L + +E A+ V+
Sbjct: 87 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVS----- 141
Query: 315 AHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADS--SNRTLLAGTY 372
AL YLH IIHRD+ NILLN + + DFGTA++L +S + GT
Sbjct: 142 --ALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 196
Query: 373 GYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDIXXXXXXXXDPKIMLIDV-LDQR 431
Y++PEL + D+++ G + +++ G P KI+ ++ ++
Sbjct: 197 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP--FRAGNEYLIFQKIIKLEYDFPEK 254
Query: 432 LPPPVDRKVIRDILLISTVSFACLQSNP----KSRPTMQSVSQEFLITRKTP 479
P V + ++L +T C + K+ P +SV+ E L + P
Sbjct: 255 FFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPP 306
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 125/292 (42%), Gaps = 32/292 (10%)
Query: 205 EDFDIRYCIGTGGYGSVYKA-QLPNGKVFALKKLHTSEELAFIKSFK-----NEAQVLSQ 258
EDF +G G + +V A +L + +A+K L E+ IK K E V+S+
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKIL---EKRHIIKENKVPYVTRERDVMSR 88
Query: 259 VLHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHN----NEDAVELDWAKRVNIVKAM 314
+ H VKLY + ++ Y + G L + +E A+ V+
Sbjct: 89 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVS----- 143
Query: 315 AHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADS--SNRTLLAGTY 372
AL YLH IIHRD+ NILLN + + DFGTA++L +S + GT
Sbjct: 144 --ALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 198
Query: 373 GYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDIXXXXXXXXDPKIMLIDV-LDQR 431
Y++PEL + D+++ G + +++ G P KI+ ++ ++
Sbjct: 199 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP--FRAGNEYLIFQKIIKLEYDFPEK 256
Query: 432 LPPPVDRKVIRDILLISTVSFACLQSNP----KSRPTMQSVSQEFLITRKTP 479
P V + ++L +T C + K+ P +SV+ E L + P
Sbjct: 257 FFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPP 308
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 125/292 (42%), Gaps = 32/292 (10%)
Query: 205 EDFDIRYCIGTGGYGSVYKA-QLPNGKVFALKKLHTSEELAFIKSFK-----NEAQVLSQ 258
EDF +G G + +V A +L + +A+K L E+ IK K E V+S+
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKIL---EKRHIIKENKVPYVTRERDVMSR 86
Query: 259 VLHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHN----NEDAVELDWAKRVNIVKAM 314
+ H VKLY + ++ Y + G L + +E A+ V+
Sbjct: 87 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVS----- 141
Query: 315 AHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADS--SNRTLLAGTY 372
AL YLH IIHRD+ NILLN + + DFGTA++L +S + GT
Sbjct: 142 --ALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 196
Query: 373 GYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDIXXXXXXXXDPKIMLIDV-LDQR 431
Y++PEL + D+++ G + +++ G P KI+ ++ ++
Sbjct: 197 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP--FRAGNEYLIFQKIIKLEYDFPEK 254
Query: 432 LPPPVDRKVIRDILLISTVSFACLQSNP----KSRPTMQSVSQEFLITRKTP 479
P V + ++L +T C + K+ P +SV+ E L + P
Sbjct: 255 FFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPP 306
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 98/203 (48%), Gaps = 20/203 (9%)
Query: 213 IGTGGYGSVYKAQ-LPNGKVFALKKLHTSEELAFIK--SFKNEAQVLSQVLHRNIVKLYG 269
IG G +G+VY A+ + N +V A+KK+ S + + K E + L ++ H N ++ G
Sbjct: 23 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 82
Query: 270 YCLHKKCMFLIYEY-MERGSLFCNLHNNE-DAVELDWAKRVNIVKAMAHALAYLHHDCSP 327
L + +L+ EY + S +H VE+ + LAYLH S
Sbjct: 83 CYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEI-----AAVTHGALQGLAYLH---SH 134
Query: 328 SIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYTMVMTE 387
++IHRD+ + NILL+ + DFG+A ++ + GT ++APE+ M +
Sbjct: 135 NMIHRDVKAGNILLSEPGLVKLGDFGSASIM----APANXFVGTPYWMAPEVILAMDEGQ 190
Query: 388 ---KCDVYSFGVVTLEVLMGKHP 407
K DV+S G+ +E+ K P
Sbjct: 191 YDGKVDVWSLGITCIELAERKPP 213
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 95/190 (50%), Gaps = 12/190 (6%)
Query: 213 IGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCL 272
IG G +G V KV A+K + A ++F EA V++Q+ H N+V+L G +
Sbjct: 20 IGKGEFGDVMLGDYRGNKV-AVKCIKND---ATAQAFLAEASVMTQLRHSNLVQLLGVIV 75
Query: 273 HKKC-MFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIH 331
+K ++++ EYM +GSL L + +V L + + A+ YL + + +H
Sbjct: 76 EEKGGLYIVTEYMAKGSLVDYLRSRGRSV-LGGDCLLKFSLDVCEAMEYLEGN---NFVH 131
Query: 332 RDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYTMVMTEKCDV 391
RD+++ N+L++ A V+DFG L SS + + APE + K DV
Sbjct: 132 RDLAARNVLVSEDNVAKVSDFG---LTKEASSTQDTGKLPVKWTAPEALREAAFSTKSDV 188
Query: 392 YSFGVVTLEV 401
+SFG++ E+
Sbjct: 189 WSFGILLWEI 198
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 124/295 (42%), Gaps = 61/295 (20%)
Query: 213 IGTGGYGSVYKAQLPN-GKV-----FALKKLHTSEELAFIKSFKNEAQVLSQV-LHRNIV 265
+G G +G V +A GK A+K L ++ ++ +E +++S + H NIV
Sbjct: 39 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 98
Query: 266 KLYGYCLHKKCMFLIYEYMERGSLFCNLH--------------------NNEDAVELDWA 305
L G C H + +I EY G L L + ED L+
Sbjct: 99 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELR 158
Query: 306 KRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNR 365
++ +A +A+L S + IHRD+++ N+LL + A + DFG AR + DS+
Sbjct: 159 DLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN-- 213
Query: 366 TLLAGT----YGYIAPELAYTMVMTEKCDVYSFGVVTLEVL-MGKHPRDIXXXXXXXXDP 420
++ G ++APE + V T + DV+S+G++ E+ +G +P P
Sbjct: 214 YIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY-----------P 262
Query: 421 KIM-------LIDVLDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSV 468
I+ L+ Q P K I I+ AC P RPT Q +
Sbjct: 263 GILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQ------ACWALEPTHRPTFQQI 311
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 125/292 (42%), Gaps = 32/292 (10%)
Query: 205 EDFDIRYCIGTGGYGSVYKA-QLPNGKVFALKKLHTSEELAFIKSFK-----NEAQVLSQ 258
EDF +G G + +V A +L + +A+K L E+ IK K E V+S+
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKIL---EKRHIIKENKVPYVTRERDVMSR 88
Query: 259 VLHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHN----NEDAVELDWAKRVNIVKAM 314
+ H VKLY + ++ Y + G L + +E A+ V+
Sbjct: 89 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVS----- 143
Query: 315 AHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADS--SNRTLLAGTY 372
AL YLH IIHRD+ NILLN + + DFGTA++L +S + GT
Sbjct: 144 --ALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 198
Query: 373 GYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDIXXXXXXXXDPKIMLIDV-LDQR 431
Y++PEL + D+++ G + +++ G P KI+ ++ ++
Sbjct: 199 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP--FRAGNEYLIFQKIIKLEYDFPEK 256
Query: 432 LPPPVDRKVIRDILLISTVSFACLQSNP----KSRPTMQSVSQEFLITRKTP 479
P V + ++L +T C + K+ P +SV+ E L + P
Sbjct: 257 FFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPP 308
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 92/204 (45%), Gaps = 14/204 (6%)
Query: 213 IGTGGYGSVYKAQL--PNGKVF--ALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLY 268
IG G +G VY L +GK A+K L+ ++ + F E ++ H N++ L
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 269 GYCLHKKCM-FLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSP 327
G CL + ++ YM+ G L + N + + +A + +L S
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKFL---ASK 152
Query: 328 SIIHRDISSNNILLNSKLEAFVADFGTARLLHADS----SNRTLLAGTYGYIAPELAYTM 383
+HRD+++ N +L+ K VADFG AR ++ N+T ++A E T
Sbjct: 153 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQ 212
Query: 384 VMTEKCDVYSFGVVTLEVLMGKHP 407
T K DV+SFGV+ E++ P
Sbjct: 213 KFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 92/204 (45%), Gaps = 14/204 (6%)
Query: 213 IGTGGYGSVYKAQL--PNGKVF--ALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLY 268
IG G +G VY L +GK A+K L+ ++ + F E ++ H N++ L
Sbjct: 97 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 156
Query: 269 GYCLHKKCM-FLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSP 327
G CL + ++ YM+ G L + N + + +A + +L S
Sbjct: 157 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK--DLIGFGLQVAKGMKFL---ASK 211
Query: 328 SIIHRDISSNNILLNSKLEAFVADFGTARLLHADS----SNRTLLAGTYGYIAPELAYTM 383
+HRD+++ N +L+ K VADFG AR ++ N+T ++A E T
Sbjct: 212 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQ 271
Query: 384 VMTEKCDVYSFGVVTLEVLMGKHP 407
T K DV+SFGV+ E++ P
Sbjct: 272 KFTTKSDVWSFGVLLWELMTRGAP 295
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 99/222 (44%), Gaps = 32/222 (14%)
Query: 213 IGTGGYGSVYKAQL-------PNGKV-FALKKLHTSEELAFIKSFKNEAQVLSQV-LHRN 263
+G G +G V A+ PN A+K L + + +E +++ + H+N
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 264 IVKLYGYCLHKKCMFLIYEYMERGSLFCNL---------------HNNEDAVELDWAKRV 308
I+ L G C +++I EY +G+L L HN E+ +L V
Sbjct: 89 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEE--QLSSKDLV 146
Query: 309 NIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLL 368
+ +A + YL S IHRD+++ N+L+ +ADFG AR +H +
Sbjct: 147 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 203
Query: 369 AGT--YGYIAPELAYTMVMTEKCDVYSFGVVTLEVL-MGKHP 407
G ++APE + + T + DV+SFGV+ E+ +G P
Sbjct: 204 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 245
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 125/292 (42%), Gaps = 32/292 (10%)
Query: 205 EDFDIRYCIGTGGYGSVYKA-QLPNGKVFALKKLHTSEELAFIKSFK-----NEAQVLSQ 258
EDF +G G + +V A +L + +A+K L E+ IK K E V+S+
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKIL---EKRHIIKENKVPYVTRERDVMSR 86
Query: 259 VLHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHN----NEDAVELDWAKRVNIVKAM 314
+ H VKLY + ++ Y + G L + +E A+ V+
Sbjct: 87 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVS----- 141
Query: 315 AHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADS--SNRTLLAGTY 372
AL YLH IIHRD+ NILLN + + DFGTA++L +S + GT
Sbjct: 142 --ALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTA 196
Query: 373 GYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDIXXXXXXXXDPKIMLIDV-LDQR 431
Y++PEL + D+++ G + +++ G P KI+ ++ ++
Sbjct: 197 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP--FRAGNEYLIFQKIIKLEYDFPEK 254
Query: 432 LPPPVDRKVIRDILLISTVSFACLQSNP----KSRPTMQSVSQEFLITRKTP 479
P V + ++L +T C + K+ P +SV+ E L + P
Sbjct: 255 FFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPP 306
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 116/279 (41%), Gaps = 32/279 (11%)
Query: 203 ATEDFDIRYCIGTGGYGSVYKA-------QLPNGKVFALKKLHTSEELAFIKSFKNEAQV 255
A E + +G G +G VY+ P +V A+K ++ + + F NEA V
Sbjct: 8 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRV-AIKTVNEAASMRERIEFLNEASV 66
Query: 256 LSQVLHRNIVKLYGYCLHKKCMFLIYEYMERG-------SLFCNLHNNEDAVELDWAKRV 308
+ + ++V+L G + +I E M RG SL + NN +K +
Sbjct: 67 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 126
Query: 309 NIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLL 368
+ +A +AYL+ + +HRD+++ N ++ + DFG R + R
Sbjct: 127 QMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGG 183
Query: 369 AG--TYGYIAPELAYTMVMTEKCDVYSFGVVTLEV-LMGKHPRDIXXXXXXXXDPKIMLI 425
G +++PE V T DV+SFGVV E+ + + P +M
Sbjct: 184 KGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLR--FVMEG 241
Query: 426 DVLDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPT 464
+LD+ P D+LL + C Q NPK RP+
Sbjct: 242 GLLDKPDNCP-------DMLL--ELMRMCWQYNPKMRPS 271
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 97/215 (45%), Gaps = 25/215 (11%)
Query: 205 EDFDIRYCIGTGGYGSVYKA-QLPNGKVFALKKLHTSEELAFIKSFK-----NEAQVLSQ 258
EDF +G G + +V A +L + +A+K L E+ IK K E V+S+
Sbjct: 35 EDFKFGKILGEGSFSTVVLARELATSREYAIKIL---EKRHIIKENKVPYVTRERDVMSR 91
Query: 259 VLHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHN----NEDAVELDWAKRVNIVKAM 314
+ H VKLY + ++ Y + G L + +E A+ V+
Sbjct: 92 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVS----- 146
Query: 315 AHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADS--SNRTLLAGTY 372
AL YLH IIHRD+ NILLN + + DFGTA++L +S + GT
Sbjct: 147 --ALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 201
Query: 373 GYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
Y++PEL + D+++ G + +++ G P
Sbjct: 202 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 236
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 92/204 (45%), Gaps = 14/204 (6%)
Query: 213 IGTGGYGSVYKAQL--PNGKVF--ALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLY 268
IG G +G VY L +GK A+K L+ ++ + F E ++ H N++ L
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 269 GYCLHKKCM-FLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSP 327
G CL + ++ YM+ G L + N + + +A + +L S
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKFL---ASK 152
Query: 328 SIIHRDISSNNILLNSKLEAFVADFGTARLLHADS----SNRTLLAGTYGYIAPELAYTM 383
+HRD+++ N +L+ K VADFG AR ++ N+T ++A E T
Sbjct: 153 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQ 212
Query: 384 VMTEKCDVYSFGVVTLEVLMGKHP 407
T K DV+SFGV+ E++ P
Sbjct: 213 KFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 125/292 (42%), Gaps = 32/292 (10%)
Query: 205 EDFDIRYCIGTGGYGSVYKA-QLPNGKVFALKKLHTSEELAFIKSFK-----NEAQVLSQ 258
EDF +G G + +V A +L + +A+K L E+ IK K E V+S+
Sbjct: 14 EDFKFGKILGEGSFSTVVLARELATSREYAIKIL---EKRHIIKENKVPYVTRERDVMSR 70
Query: 259 VLHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHN----NEDAVELDWAKRVNIVKAM 314
+ H VKLY + ++ Y + G L + +E A+ V+
Sbjct: 71 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVS----- 125
Query: 315 AHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADS--SNRTLLAGTY 372
AL YLH IIHRD+ NILLN + + DFGTA++L +S + GT
Sbjct: 126 --ALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 180
Query: 373 GYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDIXXXXXXXXDPKIMLIDV-LDQR 431
Y++PEL + D+++ G + +++ G P KI+ ++ ++
Sbjct: 181 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP--FRAGNEYLIFQKIIKLEYDFPEK 238
Query: 432 LPPPVDRKVIRDILLISTVSFACLQSNP----KSRPTMQSVSQEFLITRKTP 479
P V + ++L +T C + K+ P +SV+ E L + P
Sbjct: 239 FFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPP 290
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 96/200 (48%), Gaps = 11/200 (5%)
Query: 213 IGTGGYGSVYKAQLPNGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLHRNIVKLYGY 270
+GT G V K +L KV A+K L+ + L + + E Q L H +I+KLY
Sbjct: 26 VGTFGKVKVGKHELTGHKV-AVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQV 84
Query: 271 CLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSII 330
+F++ EY+ G LF + N LD + + + + + Y H ++
Sbjct: 85 ISTPSDIFMVMEYVSGGELFDYICKNG---RLDEKESRRLFQQILSGVDYCHRHM---VV 138
Query: 331 HRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPE-LAYTMVMTEKC 389
HRD+ N+LL++ + A +ADFG + ++ +D G+ Y APE ++ + +
Sbjct: 139 HRDLKPENVLLDAHMNAKIADFGLSNMM-SDGEFLRXSCGSPNYAAPEVISGRLYAGPEV 197
Query: 390 DVYSFGVVTLEVLMGKHPRD 409
D++S GV+ +L G P D
Sbjct: 198 DIWSSGVILYALLCGTLPFD 217
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 92/204 (45%), Gaps = 14/204 (6%)
Query: 213 IGTGGYGSVYKAQL--PNGKVF--ALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLY 268
IG G +G VY L +GK A+K L+ ++ + F E ++ H N++ L
Sbjct: 43 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 102
Query: 269 GYCLHKKCM-FLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSP 327
G CL + ++ YM+ G L + N + + +A + +L S
Sbjct: 103 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKFL---ASK 157
Query: 328 SIIHRDISSNNILLNSKLEAFVADFGTARLLHADS----SNRTLLAGTYGYIAPELAYTM 383
+HRD+++ N +L+ K VADFG AR ++ N+T ++A E T
Sbjct: 158 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQ 217
Query: 384 VMTEKCDVYSFGVVTLEVLMGKHP 407
T K DV+SFGV+ E++ P
Sbjct: 218 KFTTKSDVWSFGVLLWELMTRGAP 241
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 100/218 (45%), Gaps = 24/218 (11%)
Query: 197 YEDLIEATEDFDIRYCIGT-GGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQV 255
YE + D IG G +G VYKAQ V A K+ ++ ++ + E +
Sbjct: 1 YEHVTRDLNPEDFWEIIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDI 60
Query: 256 LSQVLHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAK-----RVNI 310
L+ H NIVKL ++ ++++ E+ G++ DAV L+ + ++ +
Sbjct: 61 LASCDHPNIVKLLDAFYYENNLWILIEFCAGGAV--------DAVMLELERPLTESQIQV 112
Query: 311 V-KAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFG-TARLLHADSSNRTLL 368
V K AL YLH + IIHRD+ + NIL + +ADFG +A+ R
Sbjct: 113 VCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSF 169
Query: 369 AGTYGYIAPELAYTMVMTE-----KCDVYSFGVVTLEV 401
GT ++APE+ + K DV+S G+ +E+
Sbjct: 170 IGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 207
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 92/204 (45%), Gaps = 14/204 (6%)
Query: 213 IGTGGYGSVYKAQL--PNGKVF--ALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLY 268
IG G +G VY L +GK A+K L+ ++ + F E ++ H N++ L
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 98
Query: 269 GYCLHKKCM-FLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSP 327
G CL + ++ YM+ G L + N + + +A + +L S
Sbjct: 99 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKFL---ASK 153
Query: 328 SIIHRDISSNNILLNSKLEAFVADFGTARLLHADS----SNRTLLAGTYGYIAPELAYTM 383
+HRD+++ N +L+ K VADFG AR ++ N+T ++A E T
Sbjct: 154 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQ 213
Query: 384 VMTEKCDVYSFGVVTLEVLMGKHP 407
T K DV+SFGV+ E++ P
Sbjct: 214 KFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 92/204 (45%), Gaps = 14/204 (6%)
Query: 213 IGTGGYGSVYKAQL--PNGKVF--ALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLY 268
IG G +G VY L +GK A+K L+ ++ + F E ++ H N++ L
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 95
Query: 269 GYCLHKKCM-FLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSP 327
G CL + ++ YM+ G L + N + + +A + +L S
Sbjct: 96 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKFL---ASK 150
Query: 328 SIIHRDISSNNILLNSKLEAFVADFGTARLLHADS----SNRTLLAGTYGYIAPELAYTM 383
+HRD+++ N +L+ K VADFG AR ++ N+T ++A E T
Sbjct: 151 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQ 210
Query: 384 VMTEKCDVYSFGVVTLEVLMGKHP 407
T K DV+SFGV+ E++ P
Sbjct: 211 KFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 99/222 (44%), Gaps = 32/222 (14%)
Query: 213 IGTGGYGSVYKAQL-------PNGKV-FALKKLHTSEELAFIKSFKNEAQVLSQV-LHRN 263
+G G +G V A+ PN A+K L + + +E +++ + H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 264 IVKLYGYCLHKKCMFLIYEYMERGSLFCNL---------------HNNEDAVELDWAKRV 308
I+ L G C +++I EY +G+L L HN E+ +L V
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEE--QLSSKDLV 153
Query: 309 NIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLL 368
+ +A + YL S IHRD+++ N+L+ +ADFG AR +H +
Sbjct: 154 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 210
Query: 369 AGT--YGYIAPELAYTMVMTEKCDVYSFGVVTLEVL-MGKHP 407
G ++APE + + T + DV+SFGV+ E+ +G P
Sbjct: 211 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 252
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 99/222 (44%), Gaps = 32/222 (14%)
Query: 213 IGTGGYGSVYKAQL-------PNGKV-FALKKLHTSEELAFIKSFKNEAQVLSQV-LHRN 263
+G G +G V A+ PN A+K L + + +E +++ + H+N
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 264 IVKLYGYCLHKKCMFLIYEYMERGSLFCNL---------------HNNEDAVELDWAKRV 308
I+ L G C +++I EY +G+L L HN E+ +L V
Sbjct: 88 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEE--QLSSKDLV 145
Query: 309 NIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLL 368
+ +A + YL S IHRD+++ N+L+ +ADFG AR +H +
Sbjct: 146 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 202
Query: 369 AGT--YGYIAPELAYTMVMTEKCDVYSFGVVTLEVL-MGKHP 407
G ++APE + + T + DV+SFGV+ E+ +G P
Sbjct: 203 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 244
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 99/222 (44%), Gaps = 32/222 (14%)
Query: 213 IGTGGYGSVYKAQL-------PNGKV-FALKKLHTSEELAFIKSFKNEAQVLSQV-LHRN 263
+G G +G V A+ PN A+K L + + +E +++ + H+N
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 264 IVKLYGYCLHKKCMFLIYEYMERGSLFCNL---------------HNNEDAVELDWAKRV 308
I+ L G C +++I EY +G+L L HN E+ +L V
Sbjct: 85 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEE--QLSSKDLV 142
Query: 309 NIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLL 368
+ +A + YL S IHRD+++ N+L+ +ADFG AR +H +
Sbjct: 143 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 199
Query: 369 AGT--YGYIAPELAYTMVMTEKCDVYSFGVVTLEVL-MGKHP 407
G ++APE + + T + DV+SFGV+ E+ +G P
Sbjct: 200 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 241
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 99/222 (44%), Gaps = 32/222 (14%)
Query: 213 IGTGGYGSVYKAQL-------PNGKV-FALKKLHTSEELAFIKSFKNEAQVLSQV-LHRN 263
+G G +G V A+ PN A+K L + + +E +++ + H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 264 IVKLYGYCLHKKCMFLIYEYMERGSLFCNL---------------HNNEDAVELDWAKRV 308
I+ L G C +++I EY +G+L L HN E+ +L V
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEE--QLSSKDLV 153
Query: 309 NIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLL 368
+ +A + YL S IHRD+++ N+L+ +ADFG AR +H +
Sbjct: 154 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 210
Query: 369 AGT--YGYIAPELAYTMVMTEKCDVYSFGVVTLEVL-MGKHP 407
G ++APE + + T + DV+SFGV+ E+ +G P
Sbjct: 211 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 252
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 98/202 (48%), Gaps = 19/202 (9%)
Query: 213 IGTGGYGSVY-KAQLPNGKVFALKKLHTSEELAFI-KSFKNEAQVLSQVLHRNIVKLYGY 270
+G+G + V+ Q GK+FALK + S AF S +NE VL ++ H NIV L
Sbjct: 17 LGSGAFSEVFLVKQRLTGKLFALKCIKKSP--AFRDSSLENEIAVLKKIKHENIVTLEDI 74
Query: 271 CLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSII 330
+L+ + + G LF + E D + +++ + A+ YLH + I+
Sbjct: 75 YESTTHYYLVMQLVSGGELFDRILERGVYTEKDASL---VIQQVLSAVKYLHEN---GIV 128
Query: 331 HRDISSNNILL-----NSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYTMVM 385
HRD+ N+L NSK+ + DFG +++ + + GT GY+APE+
Sbjct: 129 HRDLKPENLLYLTPEENSKI--MITDFGLSKM--EQNGIMSTACGTPGYVAPEVLAQKPY 184
Query: 386 TEKCDVYSFGVVTLEVLMGKHP 407
++ D +S GV+T +L G P
Sbjct: 185 SKAVDCWSIGVITYILLCGYPP 206
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 101/208 (48%), Gaps = 13/208 (6%)
Query: 205 EDFDIRYCIGTGGYGSVYKAQ-LPNGKVFALKKLH-TSEELAFIKSFKNEAQVLSQVLHR 262
E ++I +G G +G V K + + +A+K ++ S + + E ++L ++ H
Sbjct: 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHP 81
Query: 263 NIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLH 322
NI+KL+ +++ E G LF + + E D A+ I+K + + Y+H
Sbjct: 82 NIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAAR---IIKQVFSGITYMH 138
Query: 323 HDCSPSIIHRDISSNNILLNSK---LEAFVADFGTARLLHADSSNRTLLAGTYGYIAPEL 379
+I+HRD+ NILL SK + + DFG + ++ + + GT YIAPE+
Sbjct: 139 ---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRI-GTAYYIAPEV 194
Query: 380 AYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
EKCDV+S GV+ +L G P
Sbjct: 195 LRG-TYDEKCDVWSAGVILYILLSGTPP 221
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 125/292 (42%), Gaps = 32/292 (10%)
Query: 205 EDFDIRYCIGTGGYGSVYKA-QLPNGKVFALKKLHTSEELAFIKSFK-----NEAQVLSQ 258
EDF +G G + +V A +L + +A+K L E+ IK K E V+S+
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKIL---EKRHIIKENKVPYVTRERDVMSR 89
Query: 259 VLHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHN----NEDAVELDWAKRVNIVKAM 314
+ H VKLY + ++ Y + G L + +E A+ V+
Sbjct: 90 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVS----- 144
Query: 315 AHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADS--SNRTLLAGTY 372
AL YLH IIHRD+ NILLN + + DFGTA++L +S + GT
Sbjct: 145 --ALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTA 199
Query: 373 GYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDIXXXXXXXXDPKIMLIDV-LDQR 431
Y++PEL + D+++ G + +++ G P KI+ ++ ++
Sbjct: 200 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP--FRAGNEYLIFQKIIKLEYDFPEK 257
Query: 432 LPPPVDRKVIRDILLISTVSFACLQSNP----KSRPTMQSVSQEFLITRKTP 479
P V + ++L +T C + K+ P +SV+ E L + P
Sbjct: 258 FFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPP 309
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 125/292 (42%), Gaps = 32/292 (10%)
Query: 205 EDFDIRYCIGTGGYGSVYKA-QLPNGKVFALKKLHTSEELAFIKSFK-----NEAQVLSQ 258
EDF +G G + +V A +L + +A+K L E+ IK K E V+S+
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKIL---EKRHIIKENKVPYVTRERDVMSR 85
Query: 259 VLHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHN----NEDAVELDWAKRVNIVKAM 314
+ H VKLY + ++ Y + G L + +E A+ V+
Sbjct: 86 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVS----- 140
Query: 315 AHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADS--SNRTLLAGTY 372
AL YLH IIHRD+ NILLN + + DFGTA++L +S + GT
Sbjct: 141 --ALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 195
Query: 373 GYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDIXXXXXXXXDPKIMLIDV-LDQR 431
Y++PEL + D+++ G + +++ G P KI+ ++ ++
Sbjct: 196 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP--FRAGNEYLIFQKIIKLEYDFPEK 253
Query: 432 LPPPVDRKVIRDILLISTVSFACLQSNP----KSRPTMQSVSQEFLITRKTP 479
P V + ++L +T C + K+ P +SV+ E L + P
Sbjct: 254 FFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPP 305
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 98/205 (47%), Gaps = 16/205 (7%)
Query: 205 EDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFK-NEAQVLSQVLHR 262
E+F IG G YG VYKA+ G+V ALKK+ E + S E +L ++ H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 263 NIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKA----MAHAL 318
NIVKL + ++L++E++ + +L DA L + ++K+ + L
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQ-----DLKKFMDASALT-GIPLPLIKSYLFQLLQGL 116
Query: 319 AYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPE 378
A+ H S ++HRD+ N+L+N++ +ADFG AR T T Y APE
Sbjct: 117 AFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPE 173
Query: 379 -LAYTMVMTEKCDVYSFGVVTLEVL 402
L + D++S G + E++
Sbjct: 174 ILLGXKYYSTAVDIWSLGCIFAEMV 198
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 98/205 (47%), Gaps = 16/205 (7%)
Query: 205 EDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFK-NEAQVLSQVLHR 262
E+F IG G YG VYKA+ G+V ALKK+ E + S E +L ++ H
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 66
Query: 263 NIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKA----MAHAL 318
NIVKL + ++L++E++ + +L DA L + ++K+ + L
Sbjct: 67 NIVKLLDVIHTENKLYLVFEFLHQ-----DLKKFMDASALT-GIPLPLIKSYLFQLLQGL 120
Query: 319 AYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPE 378
A+ H S ++HRD+ N+L+N++ +ADFG AR T T Y APE
Sbjct: 121 AFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPE 177
Query: 379 -LAYTMVMTEKCDVYSFGVVTLEVL 402
L + D++S G + E++
Sbjct: 178 ILLGCKYYSTAVDIWSLGCIFAEMV 202
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 99/207 (47%), Gaps = 16/207 (7%)
Query: 203 ATEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFK-NEAQVLSQVL 260
+ E+F IG G YG VYKA+ G+V ALKK+ E + S E +L ++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 261 HRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKA----MAH 316
H NIVKL + ++L++E++ + +L DA L + ++K+ +
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQ-----DLKKFMDASALT-GIPLPLIKSYLFQLLQ 115
Query: 317 ALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIA 376
LA+ H S ++HRD+ N+L+N++ +ADFG AR T T Y A
Sbjct: 116 GLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRA 172
Query: 377 PE-LAYTMVMTEKCDVYSFGVVTLEVL 402
PE L + D++S G + E++
Sbjct: 173 PEILLGCKYYSTAVDIWSLGCIFAEMV 199
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 103/215 (47%), Gaps = 18/215 (8%)
Query: 204 TEDFDIRYCIGTGGYGSVYKAQ-LPNGKVFALKKLHT--SEELAFIKSFKNEAQVLSQVL 260
++ +++ +G GG V+ A+ L + A+K L + + +F F+ EAQ + +
Sbjct: 28 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 87
Query: 261 HRNIVKLYGYCLHKKCM----FLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAH 316
H IV +Y + +++ EY++ +L +H + + + ++
Sbjct: 88 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG---PMTPKRAIEVIADACQ 144
Query: 317 ALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNR----TLLAGTY 372
AL + H + IIHRD+ NI++++ V DFG AR + ADS N + GT
Sbjct: 145 ALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAI-ADSGNSVTQTAAVIGTA 200
Query: 373 GYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
Y++PE A + + DVYS G V EVL G+ P
Sbjct: 201 QYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 235
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 99/222 (44%), Gaps = 32/222 (14%)
Query: 213 IGTGGYGSVYKAQL-------PNGKV-FALKKLHTSEELAFIKSFKNEAQVLSQV-LHRN 263
+G G +G V A+ PN A+K L + + +E +++ + H+N
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136
Query: 264 IVKLYGYCLHKKCMFLIYEYMERGSLFCNL---------------HNNEDAVELDWAKRV 308
I+ L G C +++I EY +G+L L HN E+ +L V
Sbjct: 137 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEE--QLSSKDLV 194
Query: 309 NIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLL 368
+ +A + YL S IHRD+++ N+L+ +ADFG AR +H +
Sbjct: 195 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 251
Query: 369 AGT--YGYIAPELAYTMVMTEKCDVYSFGVVTLEVL-MGKHP 407
G ++APE + + T + DV+SFGV+ E+ +G P
Sbjct: 252 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 293
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 125/290 (43%), Gaps = 58/290 (20%)
Query: 213 IGTGGYGSVYKAQLPN-GK-----VFALKKLHTSEELAFIKSFKNEAQVLSQV-LHRNIV 265
+G G +G V +A GK A+K L ++ ++ +E +++S + H NIV
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 266 KLYGYCLHKKCMFLIYEYMERGSLFCNL---------------HNNEDAVELDWAKRVNI 310
L G C H + +I EY G L L HN E+ +L ++
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEE--QLSSRDLLHF 171
Query: 311 VKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAG 370
+A +A+L S + IHRD+++ N+LL + A + DFG AR + DS+ ++ G
Sbjct: 172 SSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN--YIVKG 226
Query: 371 T----YGYIAPELAYTMVMTEKCDVYSFGVVTLEVL-MGKHPRDIXXXXXXXXDPKIM-- 423
++APE + V T + DV+S+G++ E+ +G +P P I+
Sbjct: 227 NARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY-----------PGILVN 275
Query: 424 -----LIDVLDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSV 468
L+ Q P K I I+ AC P RPT Q +
Sbjct: 276 SKFYKLVKDGYQMAQPAFAPKNIYSIMQ------ACWALEPTHRPTFQQI 319
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 98/205 (47%), Gaps = 16/205 (7%)
Query: 205 EDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFK-NEAQVLSQVLHR 262
E+F IG G YG VYKA+ G+V ALKK+ E + S E +L ++ H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 263 NIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKA----MAHAL 318
NIVKL + ++L++E++ + +L DA L + ++K+ + L
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQ-----DLKKFMDASALT-GIPLPLIKSYLFQLLQGL 116
Query: 319 AYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPE 378
A+ H S ++HRD+ N+L+N++ +ADFG AR T T Y APE
Sbjct: 117 AFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPE 173
Query: 379 -LAYTMVMTEKCDVYSFGVVTLEVL 402
L + D++S G + E++
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMV 198
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 93/204 (45%), Gaps = 14/204 (6%)
Query: 213 IGTGGYGSVYKAQL--PNGKVF--ALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLY 268
IG G +G VY L +GK A+K L+ ++ + F E ++ H N++ L
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 98
Query: 269 GYCLHKKCM-FLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSP 327
G CL + ++ YM+ G L + N + + +A + +L S
Sbjct: 99 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKFL---ASK 153
Query: 328 SIIHRDISSNNILLNSKLEAFVADFGTARLL---HADS-SNRTLLAGTYGYIAPELAYTM 383
+HRD+++ N +L+ K VADFG AR + DS N+T ++A E T
Sbjct: 154 KFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQTQ 213
Query: 384 VMTEKCDVYSFGVVTLEVLMGKHP 407
T K DV+SFGV+ E++ P
Sbjct: 214 KFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 94/215 (43%), Gaps = 20/215 (9%)
Query: 203 ATEDFDIRYCIGTGGYGSVYKA-------QLPNGKVFALKKLHTSEELAFIKSFKNEAQV 255
A E + +G G +G VY+ P +V A+K ++ + + F NEA V
Sbjct: 23 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRV-AIKTVNEAASMRERIEFLNEASV 81
Query: 256 LSQVLHRNIVKLYGYCLHKKCMFLIYEYMERG-------SLFCNLHNNEDAVELDWAKRV 308
+ + ++V+L G + +I E M RG SL + NN +K +
Sbjct: 82 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 141
Query: 309 NIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLL 368
+ +A +AYL+ + +HRD+++ N ++ + DFG R ++ R
Sbjct: 142 QMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGG 198
Query: 369 AG--TYGYIAPELAYTMVMTEKCDVYSFGVVTLEV 401
G +++PE V T DV+SFGVV E+
Sbjct: 199 KGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 233
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 98/205 (47%), Gaps = 16/205 (7%)
Query: 205 EDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFK-NEAQVLSQVLHR 262
E+F IG G YG VYKA+ G+V ALKK+ E + S E +L ++ H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 263 NIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKA----MAHAL 318
NIVKL + ++L++E++ + +L DA L + ++K+ + L
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQ-----DLKKFMDASALT-GIPLPLIKSYLFQLLQGL 116
Query: 319 AYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPE 378
A+ H S ++HRD+ N+L+N++ +ADFG AR T T Y APE
Sbjct: 117 AFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPE 173
Query: 379 -LAYTMVMTEKCDVYSFGVVTLEVL 402
L + D++S G + E++
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMV 198
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 98/205 (47%), Gaps = 16/205 (7%)
Query: 205 EDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFK-NEAQVLSQVLHR 262
E+F IG G YG VYKA+ G+V ALKK+ E + S E +L ++ H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 263 NIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKA----MAHAL 318
NIVKL + ++L++E++ + +L DA L + ++K+ + L
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQ-----DLKKFMDASALT-GIPLPLIKSYLFQLLQGL 115
Query: 319 AYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPE 378
A+ H S ++HRD+ N+L+N++ +ADFG AR T T Y APE
Sbjct: 116 AFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPE 172
Query: 379 -LAYTMVMTEKCDVYSFGVVTLEVL 402
L + D++S G + E++
Sbjct: 173 ILLGCKYYSTAVDIWSLGCIFAEMV 197
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 98/205 (47%), Gaps = 16/205 (7%)
Query: 205 EDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFK-NEAQVLSQVLHR 262
E+F IG G YG VYKA+ G+V ALKK+ E + S E +L ++ H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 263 NIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKA----MAHAL 318
NIVKL + ++L++E++ + +L DA L + ++K+ + L
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQ-----DLKKFMDASALT-GIPLPLIKSYLFQLLQGL 115
Query: 319 AYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPE 378
A+ H S ++HRD+ N+L+N++ +ADFG AR T T Y APE
Sbjct: 116 AFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPE 172
Query: 379 -LAYTMVMTEKCDVYSFGVVTLEVL 402
L + D++S G + E++
Sbjct: 173 ILLGCKYYSTAVDIWSLGCIFAEMV 197
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 125/292 (42%), Gaps = 32/292 (10%)
Query: 205 EDFDIRYCIGTGGYGSVYKA-QLPNGKVFALKKLHTSEELAFIKSFK-----NEAQVLSQ 258
EDF +G G + +V A +L + +A+K L E+ IK K E V+S+
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKIL---EKRHIIKENKVPYVTRERDVMSR 85
Query: 259 VLHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHN----NEDAVELDWAKRVNIVKAM 314
+ H VKLY + ++ Y + G L + +E A+ V+
Sbjct: 86 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVS----- 140
Query: 315 AHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADS--SNRTLLAGTY 372
AL YLH IIHRD+ NILLN + + DFGTA++L +S + GT
Sbjct: 141 --ALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTA 195
Query: 373 GYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDIXXXXXXXXDPKIMLIDV-LDQR 431
Y++PEL + D+++ G + +++ G P KI+ ++ ++
Sbjct: 196 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP--FRAGNEYLIFQKIIKLEYDFPEK 253
Query: 432 LPPPVDRKVIRDILLISTVSFACLQSNP----KSRPTMQSVSQEFLITRKTP 479
P V + ++L +T C + K+ P +SV+ E L + P
Sbjct: 254 FFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPP 305
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 121/267 (45%), Gaps = 34/267 (12%)
Query: 213 IGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCL 272
IG G +G V KV A+K + A ++F EA V++Q+ H N+V+L G +
Sbjct: 201 IGKGEFGDVMLGDYRGNKV-AVKCIKND---ATAQAFLAEASVMTQLRHSNLVQLLGVIV 256
Query: 273 HKKC-MFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIH 331
+K ++++ EYM +GSL L + +V L + + A+ YL + + +H
Sbjct: 257 EEKGGLYIVTEYMAKGSLVDYLRSRGRSV-LGGDCLLKFSLDVCEAMEYLEGN---NFVH 312
Query: 332 RDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYTMVMTEKCDV 391
RD+++ N+L++ A V+DFG L SS + + APE + K DV
Sbjct: 313 RDLAARNVLVSEDNVAKVSDFG---LTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDV 369
Query: 392 YSFGVVTLEVL-MGKHPRDIXXXXXXXXDPKIMLIDVLDQRLPPPVDRKVIRDI-----L 445
+SFG++ E+ G+ P P+I L DV+ P V++ D
Sbjct: 370 WSFGILLWEIYSFGRVPY-----------PRIPLKDVV-----PRVEKGYKMDAPDGCPP 413
Query: 446 LISTVSFACLQSNPKSRPTMQSVSQEF 472
+ V C + +RPT + ++
Sbjct: 414 AVYDVMKNCWHLDAATRPTFLQLREQL 440
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 93/215 (43%), Gaps = 20/215 (9%)
Query: 203 ATEDFDIRYCIGTGGYGSVYKA-------QLPNGKVFALKKLHTSEELAFIKSFKNEAQV 255
A E + +G G +G VY+ P +V A+K ++ + + F NEA V
Sbjct: 17 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRV-AIKTVNEAASMRERIEFLNEASV 75
Query: 256 LSQVLHRNIVKLYGYCLHKKCMFLIYEYMERG-------SLFCNLHNNEDAVELDWAKRV 308
+ + ++V+L G + +I E M RG SL + NN +K +
Sbjct: 76 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 135
Query: 309 NIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLL 368
+ +A +AYL+ + +HRD+++ N ++ + DFG R + R
Sbjct: 136 QMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGG 192
Query: 369 AG--TYGYIAPELAYTMVMTEKCDVYSFGVVTLEV 401
G +++PE V T DV+SFGVV E+
Sbjct: 193 KGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 227
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 94/215 (43%), Gaps = 20/215 (9%)
Query: 203 ATEDFDIRYCIGTGGYGSVYKA-------QLPNGKVFALKKLHTSEELAFIKSFKNEAQV 255
A E + +G G +G VY+ P +V A+K ++ + + F NEA V
Sbjct: 16 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRV-AIKTVNEAASMRERIEFLNEASV 74
Query: 256 LSQVLHRNIVKLYGYCLHKKCMFLIYEYMERG-------SLFCNLHNNEDAVELDWAKRV 308
+ + ++V+L G + +I E M RG SL + NN +K +
Sbjct: 75 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 134
Query: 309 NIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLL 368
+ +A +AYL+ + +HRD+++ N ++ + DFG R ++ R
Sbjct: 135 QMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGG 191
Query: 369 AG--TYGYIAPELAYTMVMTEKCDVYSFGVVTLEV 401
G +++PE V T DV+SFGVV E+
Sbjct: 192 KGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 226
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 101/208 (48%), Gaps = 13/208 (6%)
Query: 205 EDFDIRYCIGTGGYGSVYKAQ-LPNGKVFALKKLH-TSEELAFIKSFKNEAQVLSQVLHR 262
E ++I +G G +G V K + + +A+K ++ S + + E ++L ++ H
Sbjct: 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHP 81
Query: 263 NIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLH 322
NI+KL+ +++ E G LF + + E D A+ I+K + + Y+H
Sbjct: 82 NIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAAR---IIKQVFSGITYMH 138
Query: 323 HDCSPSIIHRDISSNNILLNSK---LEAFVADFGTARLLHADSSNRTLLAGTYGYIAPEL 379
+I+HRD+ NILL SK + + DFG + ++ + + GT YIAPE+
Sbjct: 139 ---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRI-GTAYYIAPEV 194
Query: 380 AYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
EKCDV+S GV+ +L G P
Sbjct: 195 L-RGTYDEKCDVWSAGVILYILLSGTPP 221
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 101/208 (48%), Gaps = 13/208 (6%)
Query: 205 EDFDIRYCIGTGGYGSVYKAQ-LPNGKVFALKKLH-TSEELAFIKSFKNEAQVLSQVLHR 262
E ++I +G G +G V K + + +A+K ++ S + + E ++L ++ H
Sbjct: 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHP 81
Query: 263 NIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLH 322
NI+KL+ +++ E G LF + + E D A+ I+K + + Y+H
Sbjct: 82 NIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAAR---IIKQVFSGITYMH 138
Query: 323 HDCSPSIIHRDISSNNILLNSK---LEAFVADFGTARLLHADSSNRTLLAGTYGYIAPEL 379
+I+HRD+ NILL SK + + DFG + ++ + + GT YIAPE+
Sbjct: 139 ---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRI-GTAYYIAPEV 194
Query: 380 AYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
EKCDV+S GV+ +L G P
Sbjct: 195 L-RGTYDEKCDVWSAGVILYILLSGTPP 221
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 120/294 (40%), Gaps = 38/294 (12%)
Query: 213 IGTGGYGSVYKAQL------PNGKVFALKKL----HTSEELAFIKSFKNEAQVLSQVLHR 262
+G G +G VY+ Q+ P+ A+K L +EL F+ EA ++S++ H+
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM----EALIISKLNHQ 94
Query: 263 NIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNE----DAVELDWAKRVNIVKAMAHAL 318
NIV+ G L F++ E M G L L L +++ + +A
Sbjct: 95 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 154
Query: 319 AYLHHDCSPSIIHRDISSNNILLNSKLEAFVA---DFGTARLLHADSSNRTLLAGT--YG 373
YL + IHRDI++ N LL VA DFG AR ++ S R
Sbjct: 155 QYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 211
Query: 374 YIAPELAYTMVMTEKCDVYSFGVVTLEVL-MGKHPRDIXXXXXXXXDPKIMLIDVLDQRL 432
++ PE + T K D +SFGV+ E+ +G P + +++ R+
Sbjct: 212 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP------YPSKSNQEVLEFVTSGGRM 265
Query: 433 PPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTPLVKHAAI 486
PP + + I T C Q P+ RP + + + P V + A+
Sbjct: 266 DPP--KNCPGPVYRIMT---QCWQHQPEDRPNFAIILERIEYCTQDPDVINTAL 314
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 124/292 (42%), Gaps = 32/292 (10%)
Query: 205 EDFDIRYCIGTGGYGS-VYKAQLPNGKVFALKKLHTSEELAFIKSFK-----NEAQVLSQ 258
EDF +G G + + V +L + +A+K L E+ IK K E V+S+
Sbjct: 30 EDFKFGKILGEGSFSTTVLARELATSREYAIKIL---EKRHIIKENKVPYVTRERDVMSR 86
Query: 259 VLHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHN----NEDAVELDWAKRVNIVKAM 314
+ H VKLY + ++ Y + G L + +E A+ V+
Sbjct: 87 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVS----- 141
Query: 315 AHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADS--SNRTLLAGTY 372
AL YLH IIHRD+ NILLN + + DFGTA++L +S + GT
Sbjct: 142 --ALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 196
Query: 373 GYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDIXXXXXXXXDPKIMLIDV-LDQR 431
Y++PEL + D+++ G + +++ G P KI+ ++ ++
Sbjct: 197 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP--FRAGNEYLIFQKIIKLEYDFPEK 254
Query: 432 LPPPVDRKVIRDILLISTVSFACLQSNP----KSRPTMQSVSQEFLITRKTP 479
P V + ++L +T C + K+ P +SV+ E L + P
Sbjct: 255 FFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPP 306
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 95/190 (50%), Gaps = 12/190 (6%)
Query: 213 IGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCL 272
IG G +G V KV A+K + A ++F EA V++Q+ H N+V+L G +
Sbjct: 14 IGKGEFGDVMLGDYRGNKV-AVKCIKND---ATAQAFLAEASVMTQLRHSNLVQLLGVIV 69
Query: 273 HKKC-MFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIH 331
+K ++++ EYM +GSL L + +V L + + A+ YL + + +H
Sbjct: 70 EEKGGLYIVTEYMAKGSLVDYLRSRGRSV-LGGDCLLKFSLDVCEAMEYLEGN---NFVH 125
Query: 332 RDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYTMVMTEKCDV 391
RD+++ N+L++ A V+DFG L SS + + APE + K DV
Sbjct: 126 RDLAARNVLVSEDNVAKVSDFG---LTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDV 182
Query: 392 YSFGVVTLEV 401
+SFG++ E+
Sbjct: 183 WSFGILLWEI 192
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 120/294 (40%), Gaps = 38/294 (12%)
Query: 213 IGTGGYGSVYKAQL------PNGKVFALKKL----HTSEELAFIKSFKNEAQVLSQVLHR 262
+G G +G VY+ Q+ P+ A+K L +EL F+ EA ++S++ H+
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM----EALIISKLNHQ 108
Query: 263 NIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNE----DAVELDWAKRVNIVKAMAHAL 318
NIV+ G L F++ E M G L L L +++ + +A
Sbjct: 109 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 168
Query: 319 AYLHHDCSPSIIHRDISSNNILLNSKLEAFVA---DFGTARLLHADSSNRTLLAGTY--G 373
YL + IHRDI++ N LL VA DFG AR ++ S R
Sbjct: 169 QYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 225
Query: 374 YIAPELAYTMVMTEKCDVYSFGVVTLEVL-MGKHPRDIXXXXXXXXDPKIMLIDVLDQRL 432
++ PE + T K D +SFGV+ E+ +G P + +++ R+
Sbjct: 226 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP------YPSKSNQEVLEFVTSGGRM 279
Query: 433 PPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTPLVKHAAI 486
PP + + I T C Q P+ RP + + + P V + A+
Sbjct: 280 DPP--KNCPGPVYRIMT---QCWQHQPEDRPNFAIILERIEYCTQDPDVINTAL 328
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 95/206 (46%), Gaps = 15/206 (7%)
Query: 205 EDFDIRYCIGTGGYGSVYKA-----QLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQV 259
E ++ CIG G +G V++ + P V A+K + + F EA + Q
Sbjct: 10 ERIELGRCIGEGQFGDVHQGIYMSPENPAMAV-AIKTCKNCTSDSVREKFLQEALTMRQF 68
Query: 260 LHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALA 319
H +IVKL G + + +++I E G L L + LD A + ++ ALA
Sbjct: 69 DHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRK--FSLDLASLILYAYQLSTALA 125
Query: 320 YLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTY--GYIAP 377
YL S +HRDI++ N+L++S + DFG +R + DS+ G ++AP
Sbjct: 126 YLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTXXKASKGKLPIKWMAP 181
Query: 378 ELAYTMVMTEKCDVYSFGVVTLEVLM 403
E T DV+ FGV E+LM
Sbjct: 182 ESINFRRFTSASDVWMFGVCMWEILM 207
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 96/220 (43%), Gaps = 28/220 (12%)
Query: 213 IGTGGYGSVYKAQL-------PNGKV-FALKKLHTSEELAFIKSFKNEAQVLSQV-LHRN 263
+G G +G V A+ P V A+K L + +E +++ + H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 264 IVKLYGYCLHKKCMFLIYEYMERGSLFCNLH-------------NNEDAVELDWAKRVNI 310
I+ L G C +++I EY +G+L L N ++ + V+
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSC 162
Query: 311 VKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAG 370
+A + YL S IHRD+++ N+L+ +ADFG AR ++ + G
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNG 219
Query: 371 T--YGYIAPELAYTMVMTEKCDVYSFGVVTLEVL-MGKHP 407
++APE + V T + DV+SFGV+ E+ +G P
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 98/203 (48%), Gaps = 20/203 (9%)
Query: 213 IGTGGYGSVYKAQL-PNGKVFALKKLHTSEELAFIKSFKN-EAQVLSQVLHRNIVKL--- 267
IG G +G VY+A+L +G++ A+KK+ K FKN E Q++ ++ H NIV+L
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQD------KRFKNRELQIMRKLDHCNIVRLRYF 81
Query: 268 -YGYCLHKKCMF--LIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHD 324
Y K ++ L+ +Y+ H + L + + +LAY+H
Sbjct: 82 FYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH-- 139
Query: 325 CSPSIIHRDISSNNILLNSKLEAF-VADFGTARLLHADSSNRTLLAGTYGYIAPELAYTM 383
S I HRDI N+LL+ + DFG+A+ L N + + Y Y APEL +
Sbjct: 140 -SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAPELIFGA 197
Query: 384 V-MTEKCDVYSFGVVTLEVLMGK 405
T DV+S G V E+L+G+
Sbjct: 198 TDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 94/215 (43%), Gaps = 20/215 (9%)
Query: 203 ATEDFDIRYCIGTGGYGSVYKA-------QLPNGKVFALKKLHTSEELAFIKSFKNEAQV 255
A E + +G G +G VY+ P +V A+K ++ + + F NEA V
Sbjct: 10 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRV-AIKTVNEAASMRERIEFLNEASV 68
Query: 256 LSQVLHRNIVKLYGYCLHKKCMFLIYEYMERG-------SLFCNLHNNEDAVELDWAKRV 308
+ + ++V+L G + +I E M RG SL + NN +K +
Sbjct: 69 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 128
Query: 309 NIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLL 368
+ +A +AYL+ + +HRD+++ N ++ + DFG R ++ R
Sbjct: 129 QMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGG 185
Query: 369 AG--TYGYIAPELAYTMVMTEKCDVYSFGVVTLEV 401
G +++PE V T DV+SFGVV E+
Sbjct: 186 KGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 220
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 94/215 (43%), Gaps = 20/215 (9%)
Query: 203 ATEDFDIRYCIGTGGYGSVYKA-------QLPNGKVFALKKLHTSEELAFIKSFKNEAQV 255
A E + +G G +G VY+ P +V A+K ++ + + F NEA V
Sbjct: 14 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRV-AIKTVNEAASMRERIEFLNEASV 72
Query: 256 LSQVLHRNIVKLYGYCLHKKCMFLIYEYMERG-------SLFCNLHNNEDAVELDWAKRV 308
+ + ++V+L G + +I E M RG SL + NN +K +
Sbjct: 73 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 132
Query: 309 NIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLL 368
+ +A +AYL+ + +HRD+++ N ++ + DFG R ++ R
Sbjct: 133 QMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGG 189
Query: 369 AG--TYGYIAPELAYTMVMTEKCDVYSFGVVTLEV 401
G +++PE V T DV+SFGVV E+
Sbjct: 190 KGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 224
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 96/220 (43%), Gaps = 28/220 (12%)
Query: 213 IGTGGYGSVYKAQL-------PNGKV-FALKKLHTSEELAFIKSFKNEAQVLSQV-LHRN 263
+G G +G V A+ P V A+K L + +E +++ + H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 264 IVKLYGYCLHKKCMFLIYEYMERGSLFCNLH-------------NNEDAVELDWAKRVNI 310
I+ L G C +++I EY +G+L L N ++ + V+
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 311 VKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAG 370
+A + YL S IHRD+++ N+L+ +ADFG AR ++ + G
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNG 219
Query: 371 T--YGYIAPELAYTMVMTEKCDVYSFGVVTLEVL-MGKHP 407
++APE + V T + DV+SFGV+ E+ +G P
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 94/215 (43%), Gaps = 20/215 (9%)
Query: 203 ATEDFDIRYCIGTGGYGSVYKA-------QLPNGKVFALKKLHTSEELAFIKSFKNEAQV 255
A E + +G G +G VY+ P +V A+K ++ + + F NEA V
Sbjct: 16 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRV-AIKTVNEAASMRERIEFLNEASV 74
Query: 256 LSQVLHRNIVKLYGYCLHKKCMFLIYEYMERG-------SLFCNLHNNEDAVELDWAKRV 308
+ + ++V+L G + +I E M RG SL + NN +K +
Sbjct: 75 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 134
Query: 309 NIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLL 368
+ +A +AYL+ + +HRD+++ N ++ + DFG R ++ R
Sbjct: 135 QMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGG 191
Query: 369 AG--TYGYIAPELAYTMVMTEKCDVYSFGVVTLEV 401
G +++PE V T DV+SFGVV E+
Sbjct: 192 KGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 226
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 94/215 (43%), Gaps = 20/215 (9%)
Query: 203 ATEDFDIRYCIGTGGYGSVYKA-------QLPNGKVFALKKLHTSEELAFIKSFKNEAQV 255
A E + +G G +G VY+ P +V A+K ++ + + F NEA V
Sbjct: 17 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRV-AIKTVNEAASMRERIEFLNEASV 75
Query: 256 LSQVLHRNIVKLYGYCLHKKCMFLIYEYMERG-------SLFCNLHNNEDAVELDWAKRV 308
+ + ++V+L G + +I E M RG SL + NN +K +
Sbjct: 76 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 135
Query: 309 NIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLL 368
+ +A +AYL+ + +HRD+++ N ++ + DFG R ++ R
Sbjct: 136 QMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGG 192
Query: 369 AG--TYGYIAPELAYTMVMTEKCDVYSFGVVTLEV 401
G +++PE V T DV+SFGVV E+
Sbjct: 193 KGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 227
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 119/294 (40%), Gaps = 38/294 (12%)
Query: 213 IGTGGYGSVYKAQL------PNGKVFALKKL----HTSEELAFIKSFKNEAQVLSQVLHR 262
+G G +G VY+ Q+ P+ A+K L +EL F+ EA ++S+ H+
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM----EALIISKFNHQ 94
Query: 263 NIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNE----DAVELDWAKRVNIVKAMAHAL 318
NIV+ G L F++ E M G L L L +++ + +A
Sbjct: 95 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 154
Query: 319 AYLHHDCSPSIIHRDISSNNILLNSKLEAFVA---DFGTARLLHADSSNRTLLAGT--YG 373
YL + IHRDI++ N LL VA DFG AR ++ S R
Sbjct: 155 QYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 211
Query: 374 YIAPELAYTMVMTEKCDVYSFGVVTLEVL-MGKHPRDIXXXXXXXXDPKIMLIDVLDQRL 432
++ PE + T K D +SFGV+ E+ +G P + +++ R+
Sbjct: 212 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP------YPSKSNQEVLEFVTSGGRM 265
Query: 433 PPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTPLVKHAAI 486
PP + + I T C Q P+ RP + + + P V + A+
Sbjct: 266 DPP--KNCPGPVYRIMT---QCWQHQPEDRPNFAIILERIEYCTQDPDVINTAL 314
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 119/294 (40%), Gaps = 38/294 (12%)
Query: 213 IGTGGYGSVYKAQL------PNGKVFALKKL----HTSEELAFIKSFKNEAQVLSQVLHR 262
+G G +G VY+ Q+ P+ A+K L +EL F+ EA ++S+ H+
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM----EALIISKFNHQ 108
Query: 263 NIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNE----DAVELDWAKRVNIVKAMAHAL 318
NIV+ G L F++ E M G L L L +++ + +A
Sbjct: 109 NIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 168
Query: 319 AYLHHDCSPSIIHRDISSNNILLNSKLEAFVA---DFGTARLLHADSSNRTLLAGT--YG 373
YL + IHRDI++ N LL VA DFG AR ++ S R
Sbjct: 169 QYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 225
Query: 374 YIAPELAYTMVMTEKCDVYSFGVVTLEVL-MGKHPRDIXXXXXXXXDPKIMLIDVLDQRL 432
++ PE + T K D +SFGV+ E+ +G P + +++ R+
Sbjct: 226 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP------YPSKSNQEVLEFVTSGGRM 279
Query: 433 PPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTPLVKHAAI 486
PP + + I T C Q P+ RP + + + P V + A+
Sbjct: 280 DPP--KNCPGPVYRIMT---QCWQHQPEDRPNFAIILERIEYCTQDPDVINTAL 328
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 95/190 (50%), Gaps = 12/190 (6%)
Query: 213 IGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCL 272
IG G +G V KV A+K + A ++F EA V++Q+ H N+V+L G +
Sbjct: 29 IGKGEFGDVMLGDYRGNKV-AVKCIKND---ATAQAFLAEASVMTQLRHSNLVQLLGVIV 84
Query: 273 HKKC-MFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIH 331
+K ++++ EYM +GSL L + +V L + + A+ YL + + +H
Sbjct: 85 EEKGGLYIVTEYMAKGSLVDYLRSRGRSV-LGGDCLLKFSLDVCEAMEYLEGN---NFVH 140
Query: 332 RDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYTMVMTEKCDV 391
RD+++ N+L++ A V+DFG L SS + + APE + K DV
Sbjct: 141 RDLAARNVLVSEDNVAKVSDFG---LTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDV 197
Query: 392 YSFGVVTLEV 401
+SFG++ E+
Sbjct: 198 WSFGILLWEI 207
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 119/294 (40%), Gaps = 38/294 (12%)
Query: 213 IGTGGYGSVYKAQL------PNGKVFALKKL----HTSEELAFIKSFKNEAQVLSQVLHR 262
+G G +G VY+ Q+ P+ A+K L +EL F+ EA ++S+ H+
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM----EALIISKFNHQ 85
Query: 263 NIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNE----DAVELDWAKRVNIVKAMAHAL 318
NIV+ G L F++ E M G L L L +++ + +A
Sbjct: 86 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 145
Query: 319 AYLHHDCSPSIIHRDISSNNILLNSKLEAFVA---DFGTARLLHADSSNRTLLAGT--YG 373
YL + IHRDI++ N LL VA DFG AR ++ S R
Sbjct: 146 QYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 202
Query: 374 YIAPELAYTMVMTEKCDVYSFGVVTLEVL-MGKHPRDIXXXXXXXXDPKIMLIDVLDQRL 432
++ PE + T K D +SFGV+ E+ +G P + +++ R+
Sbjct: 203 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP------YPSKSNQEVLEFVTSGGRM 256
Query: 433 PPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTPLVKHAAI 486
PP + + I T C Q P+ RP + + + P V + A+
Sbjct: 257 DPP--KNCPGPVYRIMT---QCWQHQPEDRPNFAIILERIEYCTQDPDVINTAL 305
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 119/294 (40%), Gaps = 38/294 (12%)
Query: 213 IGTGGYGSVYKAQL------PNGKVFALKKL----HTSEELAFIKSFKNEAQVLSQVLHR 262
+G G +G VY+ Q+ P+ A+K L +EL F+ EA ++S+ H+
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM----EALIISKFNHQ 93
Query: 263 NIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNE----DAVELDWAKRVNIVKAMAHAL 318
NIV+ G L F++ E M G L L L +++ + +A
Sbjct: 94 NIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 153
Query: 319 AYLHHDCSPSIIHRDISSNNILLNSKLEAFVA---DFGTARLLHADSSNRTLLAGT--YG 373
YL + IHRDI++ N LL VA DFG AR ++ S R
Sbjct: 154 QYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 210
Query: 374 YIAPELAYTMVMTEKCDVYSFGVVTLEVL-MGKHPRDIXXXXXXXXDPKIMLIDVLDQRL 432
++ PE + T K D +SFGV+ E+ +G P + +++ R+
Sbjct: 211 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP------YPSKSNQEVLEFVTSGGRM 264
Query: 433 PPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTPLVKHAAI 486
PP + + I T C Q P+ RP + + + P V + A+
Sbjct: 265 DPP--KNCPGPVYRIMT---QCWQHQPEDRPNFAIILERIEYCTQDPDVINTAL 313
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 119/294 (40%), Gaps = 38/294 (12%)
Query: 213 IGTGGYGSVYKAQL------PNGKVFALKKL----HTSEELAFIKSFKNEAQVLSQVLHR 262
+G G +G VY+ Q+ P+ A+K L +EL F+ EA ++S+ H+
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM----EALIISKFNHQ 93
Query: 263 NIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNE----DAVELDWAKRVNIVKAMAHAL 318
NIV+ G L F++ E M G L L L +++ + +A
Sbjct: 94 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 153
Query: 319 AYLHHDCSPSIIHRDISSNNILLNSKLEAFVA---DFGTARLLHADSSNRTLLAGT--YG 373
YL + IHRDI++ N LL VA DFG AR ++ S R
Sbjct: 154 QYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 210
Query: 374 YIAPELAYTMVMTEKCDVYSFGVVTLEVL-MGKHPRDIXXXXXXXXDPKIMLIDVLDQRL 432
++ PE + T K D +SFGV+ E+ +G P + +++ R+
Sbjct: 211 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP------YPSKSNQEVLEFVTSGGRM 264
Query: 433 PPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTPLVKHAAI 486
PP + + I T C Q P+ RP + + + P V + A+
Sbjct: 265 DPP--KNCPGPVYRIMT---QCWQHQPEDRPNFAIILERIEYCTQDPDVINTAL 313
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 119/294 (40%), Gaps = 38/294 (12%)
Query: 213 IGTGGYGSVYKAQL------PNGKVFALKKL----HTSEELAFIKSFKNEAQVLSQVLHR 262
+G G +G VY+ Q+ P+ A+K L +EL F+ EA ++S+ H+
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLM----EALIISKFNHQ 108
Query: 263 NIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNE----DAVELDWAKRVNIVKAMAHAL 318
NIV+ G L F++ E M G L L L +++ + +A
Sbjct: 109 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 168
Query: 319 AYLHHDCSPSIIHRDISSNNILLNSKLEAFVA---DFGTARLLHADSSNRTLLAGTY--G 373
YL + IHRDI++ N LL VA DFG AR ++ S R
Sbjct: 169 QYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 225
Query: 374 YIAPELAYTMVMTEKCDVYSFGVVTLEVL-MGKHPRDIXXXXXXXXDPKIMLIDVLDQRL 432
++ PE + T K D +SFGV+ E+ +G P + +++ R+
Sbjct: 226 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP------YPSKSNQEVLEFVTSGGRM 279
Query: 433 PPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTPLVKHAAI 486
PP + + I T C Q P+ RP + + + P V + A+
Sbjct: 280 DPP--KNCPGPVYRIMT---QCWQHQPEDRPNFAIILERIEYCTQDPDVINTAL 328
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 98/214 (45%), Gaps = 18/214 (8%)
Query: 205 EDFDIRYCIGTGGYGSVYKAQLPN-GKVFALKKL-----HTSEELAFIKSFKNEAQVLSQ 258
+DFD+ IG G Y V +L +++A+K + + E++ ++++ E V Q
Sbjct: 5 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQT---EKHVFEQ 61
Query: 259 VL-HRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKA-MAH 316
H +V L+ + +F + EY+ G L ++ E + A ++
Sbjct: 62 ASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPE----EHARFYSAEISL 117
Query: 317 ALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIA 376
AL YLH II+RD+ +N+LL+S+ + D+G + + GT YIA
Sbjct: 118 ALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIA 174
Query: 377 PELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDI 410
PE+ D ++ GV+ E++ G+ P DI
Sbjct: 175 PEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI 208
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 99/200 (49%), Gaps = 11/200 (5%)
Query: 213 IGTGGYGSVYKAQLPNGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLHRNIVKLYGY 270
+GT G + + QL KV A+K L+ + L + K E Q L H +I+KLY
Sbjct: 21 VGTFGKVKIGEHQLTGHKV-AVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQV 79
Query: 271 CLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSII 330
F++ EY+ G LF + + E++ A+R + + + A+ Y H ++
Sbjct: 80 ISTPTDFFMVMEYVSGGELFDYICKHGRVEEME-ARR--LFQQILSAVDYCHRHM---VV 133
Query: 331 HRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPE-LAYTMVMTEKC 389
HRD+ N+LL++ + A +ADFG + ++ RT G+ Y APE ++ + +
Sbjct: 134 HRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRT-SCGSPNYAAPEVISGRLYAGPEV 192
Query: 390 DVYSFGVVTLEVLMGKHPRD 409
D++S GV+ +L G P D
Sbjct: 193 DIWSCGVILYALLCGTLPFD 212
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 100/203 (49%), Gaps = 20/203 (9%)
Query: 213 IGTGGYGSVYKAQL-PNGKVFALKKLHTSEELAFIKSFKN-EAQVLSQVLHRNIVKL--Y 268
IG G +G VY+A+L +G++ A+KK+ K+FKN E Q++ ++ H NIV+L +
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQG------KAFKNRELQIMRKLDHCNIVRLRYF 81
Query: 269 GYCLHKK----CMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHD 324
Y +K + L+ +Y+ H + L + + +LAY+H
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH-- 139
Query: 325 CSPSIIHRDISSNNILLNSKLEAF-VADFGTARLLHADSSNRTLLAGTYGYIAPELAYTM 383
S I HRDI N+LL+ + DFG+A+ L N + + Y Y APEL +
Sbjct: 140 -SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YRAPELIFGA 197
Query: 384 V-MTEKCDVYSFGVVTLEVLMGK 405
T DV+S G V E+L+G+
Sbjct: 198 TDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 99/223 (44%), Gaps = 25/223 (11%)
Query: 199 DLIEATEDFDI---RYCIGTGGYGSVYKAQ-LPNGKVFALKKLHTSEELAFIKSFKNEAQ 254
DL+E ++D R +G G YG VY + L N A+K++ + + + E
Sbjct: 13 DLLEYDYEYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEI-PERDSRYSQPLHEEIA 71
Query: 255 VLSQVLHRNIVKLYGYCLHKKCMFLIYEYMERGSL-------FCNLHNNEDAVELDWAKR 307
+ + H+NIV+ G + + E + GSL + L +NE +
Sbjct: 72 LHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGF----- 126
Query: 308 VNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAF-VADFGTARLLHADSSNRT 366
K + L YLH + I+HRDI +N+L+N+ ++DFGT++ L +
Sbjct: 127 --YTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTE 181
Query: 367 LLAGTYGYIAPEL--AYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
GT Y+APE+ + D++S G +E+ GK P
Sbjct: 182 TFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPP 224
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 92/201 (45%), Gaps = 8/201 (3%)
Query: 205 EDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFK-NEAQVLSQVLHR 262
E+F IG G YG VYKA+ G+V ALKK+ E + S E +L ++ H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 263 NIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLH 322
NIVKL + ++L++E++ + +L DA L I + L L
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQ-----DLKKFMDASALTGIPLPLIKSYLFQLLQGLS 117
Query: 323 HDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPE-LAY 381
S ++HRD+ N+L+N++ +ADFG AR T T Y APE L
Sbjct: 118 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 177
Query: 382 TMVMTEKCDVYSFGVVTLEVL 402
+ D++S G + E++
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMV 198
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 119/294 (40%), Gaps = 38/294 (12%)
Query: 213 IGTGGYGSVYKAQL------PNGKVFALKKL----HTSEELAFIKSFKNEAQVLSQVLHR 262
+G G +G VY+ Q+ P+ A+K L +EL F+ EA ++S+ H+
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM----EALIISKFNHQ 100
Query: 263 NIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNE----DAVELDWAKRVNIVKAMAHAL 318
NIV+ G L F++ E M G L L L +++ + +A
Sbjct: 101 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 160
Query: 319 AYLHHDCSPSIIHRDISSNNILLNSKLEAFVA---DFGTARLLHADSSNRTLLAGTY--G 373
YL + IHRDI++ N LL VA DFG AR ++ S R
Sbjct: 161 QYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 217
Query: 374 YIAPELAYTMVMTEKCDVYSFGVVTLEVL-MGKHPRDIXXXXXXXXDPKIMLIDVLDQRL 432
++ PE + T K D +SFGV+ E+ +G P + +++ R+
Sbjct: 218 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP------YPSKSNQEVLEFVTSGGRM 271
Query: 433 PPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTPLVKHAAI 486
PP + + I T C Q P+ RP + + + P V + A+
Sbjct: 272 DPP--KNCPGPVYRIMT---QCWQHQPEDRPNFAIILERIEYCTQDPDVINTAL 320
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 119/294 (40%), Gaps = 38/294 (12%)
Query: 213 IGTGGYGSVYKAQL------PNGKVFALKKL----HTSEELAFIKSFKNEAQVLSQVLHR 262
+G G +G VY+ Q+ P+ A+K L +EL F+ EA ++S+ H+
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM----EALIISKFNHQ 110
Query: 263 NIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNE----DAVELDWAKRVNIVKAMAHAL 318
NIV+ G L F++ E M G L L L +++ + +A
Sbjct: 111 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 170
Query: 319 AYLHHDCSPSIIHRDISSNNILLNSKLEAFVA---DFGTARLLHADSSNRTLLAGTY--G 373
YL + IHRDI++ N LL VA DFG AR ++ S R
Sbjct: 171 QYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 227
Query: 374 YIAPELAYTMVMTEKCDVYSFGVVTLEVL-MGKHPRDIXXXXXXXXDPKIMLIDVLDQRL 432
++ PE + T K D +SFGV+ E+ +G P + +++ R+
Sbjct: 228 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP------YPSKSNQEVLEFVTSGGRM 281
Query: 433 PPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTPLVKHAAI 486
PP + + I T C Q P+ RP + + + P V + A+
Sbjct: 282 DPP--KNCPGPVYRIMT---QCWQHQPEDRPNFAIILERIEYCTQDPDVINTAL 330
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 98/205 (47%), Gaps = 14/205 (6%)
Query: 207 FDIRYCIGTGGYGSVYKA-QLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIV 265
F++ +G G VY+ Q K +ALK L + + +++ E VL ++ H NI+
Sbjct: 55 FEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVRT---EIGVLLRLSHPNII 111
Query: 266 KLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDC 325
KL + L+ E + G LF + E D A + VK + A+AYLH +
Sbjct: 112 KLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAA---DAVKQILEAVAYLHEN- 167
Query: 326 SPSIIHRDISSNNILLNSKLEAF---VADFGTARLLHADSSNRTLLAGTYGYIAPELAYT 382
I+HRD+ N+L + +ADFG ++++ +T+ GT GY APE+
Sbjct: 168 --GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTV-CGTPGYCAPEILRG 224
Query: 383 MVMTEKCDVYSFGVVTLEVLMGKHP 407
+ D++S G++T +L G P
Sbjct: 225 CAYGPEVDMWSVGIITYILLCGFEP 249
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 98/214 (45%), Gaps = 18/214 (8%)
Query: 205 EDFDIRYCIGTGGYGSVYKAQLPN-GKVFALKKL-----HTSEELAFIKSFKNEAQVLSQ 258
+DFD+ IG G Y V +L +++A+K + + E++ ++++ E V Q
Sbjct: 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQT---EKHVFEQ 65
Query: 259 VL-HRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKA-MAH 316
H +V L+ + +F + EY+ G L ++ E + A ++
Sbjct: 66 ASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPE----EHARFYSAEISL 121
Query: 317 ALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIA 376
AL YLH II+RD+ +N+LL+S+ + D+G + + GT YIA
Sbjct: 122 ALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIA 178
Query: 377 PELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDI 410
PE+ D ++ GV+ E++ G+ P DI
Sbjct: 179 PEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI 212
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 100/203 (49%), Gaps = 20/203 (9%)
Query: 213 IGTGGYGSVYKAQL-PNGKVFALKKLHTSEELAFIKSFKN-EAQVLSQVLHRNIVKL--Y 268
IG G +G VY+A+L +G++ A+KK+ K+FKN E Q++ ++ H NIV+L +
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQG------KAFKNRELQIMRKLDHCNIVRLRYF 81
Query: 269 GYCLHKK----CMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHD 324
Y +K + L+ +Y+ H + L + + +LAY+H
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH-- 139
Query: 325 CSPSIIHRDISSNNILLNSKLEAF-VADFGTARLLHADSSNRTLLAGTYGYIAPELAYTM 383
S I HRDI N+LL+ + DFG+A+ L N + + Y Y APEL +
Sbjct: 140 -SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YRAPELIFGA 197
Query: 384 V-MTEKCDVYSFGVVTLEVLMGK 405
T DV+S G V E+L+G+
Sbjct: 198 TDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 92/215 (42%), Gaps = 30/215 (13%)
Query: 207 FDIRYCIGTGGYGSVYKAQLPNGKV------FALKKLHTSEELAFIKSFKNEAQVLSQVL 260
FDI IG G + +VYK V +KL SE + FK EA+ L +
Sbjct: 30 FDIE--IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSER----QRFKEEAEXLKGLQ 83
Query: 261 HRNIVKLY----GYCLHKKCMFLIYEYMERGSLFCNLHN---NEDAVELDWAKRVNIVKA 313
H NIV+ Y KKC+ L+ E G+L L + V W +++
Sbjct: 84 HPNIVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQI----- 138
Query: 314 MAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAF-VADFGTARLLHADSSNRTLLAGTY 372
L +LH +P IIHRD+ +NI + + + D G A L A + + GT
Sbjct: 139 -LKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVI--GTP 194
Query: 373 GYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
+ APE Y E DVY+FG LE ++P
Sbjct: 195 EFXAPE-XYEEKYDESVDVYAFGXCXLEXATSEYP 228
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 127/293 (43%), Gaps = 33/293 (11%)
Query: 198 EDLIEATEDFDIRYCIGTGGYGSVYKAQLPNGKVFALK---KLHTSEELAF--IKSFKNE 252
ED++ + F + +G G +GSV +AQL +K K+ ++ +A I+ F E
Sbjct: 16 EDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLRE 75
Query: 253 AQVLSQVLHRNIVKLYGYCLHKKCM------FLIYEYMERGSLFCNL---HNNEDAVELD 303
A + + H ++ KL G L + +I +M+ G L L E+ L
Sbjct: 76 AACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLP 135
Query: 304 WAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSS 363
V + +A + YL S + IHRD+++ N +L + VADFG +R +++
Sbjct: 136 LQTLVRFMVDIACGMEYLS---SRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDY 192
Query: 364 NRTLLAGTY--GYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDIXXXXXXXXDP 420
R A ++A E + T DV++FGV E++ G+ P +
Sbjct: 193 YRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTP------YAGIENA 246
Query: 421 KIMLIDVLDQRL-PPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEF 472
+I + RL PP + + D++ + C ++PK RP+ + E
Sbjct: 247 EIYNYLIGGNRLKQPPECMEEVYDLM------YQCWSADPKQRPSFTCLRMEL 293
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 97/207 (46%), Gaps = 13/207 (6%)
Query: 207 FDIRYCIGTGGYGSVY---KAQLPN-GKVFALKKLHTSE-ELAFIKSFKNEAQVLSQVLH 261
F++ +G G +G V+ K P+ G ++A+K L + ++ K E +L+ V H
Sbjct: 30 FELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNH 89
Query: 262 RNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKA-MAHALAY 320
+VKL+ + ++LI +++ G LF L E D V A +A L +
Sbjct: 90 PFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEED----VKFYLAELALGLDH 145
Query: 321 LHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELA 380
LH S II+RD+ NILL+ + + DFG ++ GT Y+APE+
Sbjct: 146 LH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPEVV 202
Query: 381 YTMVMTEKCDVYSFGVVTLEVLMGKHP 407
+ D +S+GV+ E+L G P
Sbjct: 203 NRQGHSHSADWWSYGVLMFEMLTGSLP 229
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 115/245 (46%), Gaps = 18/245 (7%)
Query: 169 KYKKPKLEERATNNIDVF--SIWN-YDGRIVYEDLIEATEDFDIRYCIGTGGYGSVYK-A 224
KY PK+ N+ D F IW Y + V + +DI +G+G +G V++
Sbjct: 17 KYDGPKI-----NDYDKFYEDIWKKYVPQPVEVKQGSVYDYYDILEELGSGAFGVVHRCV 71
Query: 225 QLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEYM 284
+ G+VF K ++T L + KNE +++Q+ H ++ L+ K M LI E++
Sbjct: 72 EKATGRVFVAKFINTPYPLDKY-TVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFL 130
Query: 285 ERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSK 344
G LF + + ++ A+ +N ++ L ++H SI+H DI NI+ +K
Sbjct: 131 SGGELFDRIAAED--YKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETK 185
Query: 345 LEAFVA--DFGTARLLHADSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVL 402
+ V DFG A L+ D + A T + APE+ + D+++ GV+ +L
Sbjct: 186 KASSVKIIDFGLATKLNPDEIVKVTTA-TAEFAAPEIVDREPVGFYTDMWAIGVLGYVLL 244
Query: 403 MGKHP 407
G P
Sbjct: 245 SGLSP 249
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 116/279 (41%), Gaps = 32/279 (11%)
Query: 203 ATEDFDIRYCIGTGGYGSVYKA-------QLPNGKVFALKKLHTSEELAFIKSFKNEAQV 255
A E + +G G +G VY+ P +V A+K ++ + + F NEA V
Sbjct: 10 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRV-AIKTVNEAASMRERIEFLNEASV 68
Query: 256 LSQVLHRNIVKLYGYCLHKKCMFLIYEYMERG-------SLFCNLHNNEDAVELDWAKRV 308
+ + ++V+L G + +I E M RG SL + NN +K +
Sbjct: 69 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 128
Query: 309 NIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLL 368
+ +A +AYL+ + +HRD+++ N + + DFG R ++ R
Sbjct: 129 QMAGEIADGMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGG 185
Query: 369 AG--TYGYIAPELAYTMVMTEKCDVYSFGVVTLEV-LMGKHPRDIXXXXXXXXDPKIMLI 425
G +++PE V T DV+SFGVV E+ + + P +M
Sbjct: 186 KGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLR--FVMEG 243
Query: 426 DVLDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPT 464
+LD+ P D+LL + C Q NPK RP+
Sbjct: 244 GLLDKPDNCP-------DMLL--ELMRMCWQYNPKMRPS 273
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 98/205 (47%), Gaps = 16/205 (7%)
Query: 205 EDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFK-NEAQVLSQVLHR 262
E+F IG G YG VYKA+ G+V ALKK+ E + S E +L ++ H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 263 NIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKA----MAHAL 318
NIVKL + ++L++E++ + +L DA L + ++K+ + L
Sbjct: 62 NIVKLLDVIHTENKLYLVFEHVHQ-----DLKTFMDASALT-GIPLPLIKSYLFQLLQGL 115
Query: 319 AYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPE 378
A+ H S ++HRD+ N+L+N++ +ADFG AR T T Y APE
Sbjct: 116 AFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPE 172
Query: 379 -LAYTMVMTEKCDVYSFGVVTLEVL 402
L + D++S G + E++
Sbjct: 173 ILLGCKYYSTAVDIWSLGCIFAEMV 197
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 94/215 (43%), Gaps = 20/215 (9%)
Query: 203 ATEDFDIRYCIGTGGYGSVYKA-------QLPNGKVFALKKLHTSEELAFIKSFKNEAQV 255
A E + +G G +G VY+ P +V A+K ++ + + F NEA V
Sbjct: 45 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRV-AIKTVNEAASMRERIEFLNEASV 103
Query: 256 LSQVLHRNIVKLYGYCLHKKCMFLIYEYMERG-------SLFCNLHNNEDAVELDWAKRV 308
+ + ++V+L G + +I E M RG SL + NN +K +
Sbjct: 104 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 163
Query: 309 NIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLL 368
+ +A +AYL+ + +HRD+++ N ++ + DFG R ++ R
Sbjct: 164 QMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGG 220
Query: 369 AG--TYGYIAPELAYTMVMTEKCDVYSFGVVTLEV 401
G +++PE V T DV+SFGVV E+
Sbjct: 221 KGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 255
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 97/213 (45%), Gaps = 19/213 (8%)
Query: 204 TEDFDIRYCIGTGGYGSVYK------AQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLS 257
T+D+ + +G G + V + Q K+ KKL + + + EA++
Sbjct: 30 TDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDH----QKLEREARICR 85
Query: 258 QVLHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHA 317
+ H NIV+L+ + +L+++ + G LF ED V ++ + +
Sbjct: 86 LLKHPNIVRLHDSISEEGFHYLVFDLVTGGELF------EDIVAREYYSEADASHCIHQI 139
Query: 318 LAYLHHDCSPSIIHRDISSNNILLNSKLEAF---VADFGTARLLHADSSNRTLLAGTYGY 374
L ++H I+HRD+ N+LL SK + +ADFG A + + AGT GY
Sbjct: 140 LESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPGY 199
Query: 375 IAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
++PE+ + D+++ GV+ +L+G P
Sbjct: 200 LSPEVLRKDPYGKPVDIWACGVILYILLVGYPP 232
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 100/202 (49%), Gaps = 13/202 (6%)
Query: 213 IGTGGYGSVYKA--QLPNGKV-FALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYG 269
+G G +GSV + ++ ++ A+K L E A + EAQ++ Q+ + IV+L G
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 77
Query: 270 YCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSI 329
C + + L+ E G L L + + + + ++ ++ + YL +
Sbjct: 78 VC-QAEALMLVMEMAGGGPLHKFLVGKREEIPV--SNVAELLHQVSMGMKYLEEK---NF 131
Query: 330 IHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLL-AGTY--GYIAPELAYTMVMT 386
+HRD+++ N+LL ++ A ++DFG ++ L AD S T AG + + APE +
Sbjct: 132 VHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFS 191
Query: 387 EKCDVYSFGVVTLEVL-MGKHP 407
+ DV+S+GV E L G+ P
Sbjct: 192 SRSDVWSYGVTMWEALSYGQKP 213
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 93/210 (44%), Gaps = 19/210 (9%)
Query: 206 DFDIRYCIGTGGYGSVYKA-QLPNGKVFALKKLH-----TSEELAFIKSFKNEAQVLSQV 259
DFD +G G +G V + G+ +A+K L +E+A + E++VL
Sbjct: 11 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVT---ESRVLQNT 67
Query: 260 LHRNIVKL-YGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKA-MAHA 317
H + L Y + H + F++ EY G LF +L E +R A + A
Sbjct: 68 RHPFLTALKYAFQTHDRLCFVM-EYANGGELFFHLSRERVFTE----ERARFYGAEIVSA 122
Query: 318 LAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAP 377
L YLH S +++RDI N++L+ + DFG + +D + GT Y+AP
Sbjct: 123 LEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAP 179
Query: 378 ELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
E+ D + GVV E++ G+ P
Sbjct: 180 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 209
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 98/214 (45%), Gaps = 18/214 (8%)
Query: 205 EDFDIRYCIGTGGYGSVYKAQLPN-GKVFALKKL-----HTSEELAFIKSFKNEAQVLSQ 258
+DFD+ IG G Y V +L +++A+K + + E++ ++++ E V Q
Sbjct: 20 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQT---EKHVFEQ 76
Query: 259 VL-HRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKA-MAH 316
H +V L+ + +F + EY+ G L ++ E + A ++
Sbjct: 77 ASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPE----EHARFYSAEISL 132
Query: 317 ALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIA 376
AL YLH II+RD+ +N+LL+S+ + D+G + + GT YIA
Sbjct: 133 ALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIA 189
Query: 377 PELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDI 410
PE+ D ++ GV+ E++ G+ P DI
Sbjct: 190 PEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI 223
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 100/203 (49%), Gaps = 20/203 (9%)
Query: 213 IGTGGYGSVYKAQL-PNGKVFALKKLHTSEELAFIKSFKN-EAQVLSQVLHRNIVKL--Y 268
IG G +G VY+A+L +G++ A+KK+ K+FKN E Q++ ++ H NIV+L +
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQG------KAFKNRELQIMRKLDHCNIVRLRYF 81
Query: 269 GYCLHKK----CMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHD 324
Y +K + L+ +Y+ H + L + + +LAY+H
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH-- 139
Query: 325 CSPSIIHRDISSNNILLNSKLEAF-VADFGTARLLHADSSNRTLLAGTYGYIAPELAYTM 383
S I HRDI N+LL+ + DFG+A+ L N + + Y Y APEL +
Sbjct: 140 -SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAPELIFGA 197
Query: 384 V-MTEKCDVYSFGVVTLEVLMGK 405
T DV+S G V E+L+G+
Sbjct: 198 TDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 94/215 (43%), Gaps = 20/215 (9%)
Query: 203 ATEDFDIRYCIGTGGYGSVYKA-------QLPNGKVFALKKLHTSEELAFIKSFKNEAQV 255
A E + +G G +G VY+ P +V A+K ++ + + F NEA V
Sbjct: 23 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRV-AIKTVNEAASMRERIEFLNEASV 81
Query: 256 LSQVLHRNIVKLYGYCLHKKCMFLIYEYMERG-------SLFCNLHNNEDAVELDWAKRV 308
+ + ++V+L G + +I E M RG SL + NN +K +
Sbjct: 82 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMI 141
Query: 309 NIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLL 368
+ +A +AYL+ + +HRD+++ N ++ + DFG R ++ R
Sbjct: 142 QMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGG 198
Query: 369 AG--TYGYIAPELAYTMVMTEKCDVYSFGVVTLEV 401
G +++PE V T DV+SFGVV E+
Sbjct: 199 KGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 233
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 89/200 (44%), Gaps = 15/200 (7%)
Query: 213 IGTGGYGSV----YKAQLPN-GKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKL 267
+G G +G V Y + N G+ A+K L I K E ++L + H NIVK
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 268 YGYCLHK--KCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDC 325
G C + LI E++ GSL L N++ + L +++ + + YL
Sbjct: 89 KGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINL--KQQLKYAVQICKGMDYLG--- 143
Query: 326 SPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYG---YIAPELAYT 382
S +HRD+++ N+L+ S+ + + DFG + + D T+ + APE
Sbjct: 144 SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQ 203
Query: 383 MVMTEKCDVYSFGVVTLEVL 402
DV+SFGV E+L
Sbjct: 204 SKFYIASDVWSFGVTLHELL 223
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 93/210 (44%), Gaps = 19/210 (9%)
Query: 206 DFDIRYCIGTGGYGSVYKA-QLPNGKVFALKKLH-----TSEELAFIKSFKNEAQVLSQV 259
DFD +G G +G V + G+ +A+K L +E+A + E++VL
Sbjct: 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVT---ESRVLQNT 62
Query: 260 LHRNIVKL-YGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKA-MAHA 317
H + L Y + H + F++ EY G LF +L E +R A + A
Sbjct: 63 RHPFLTALKYAFQTHDRLCFVM-EYANGGELFFHLSRERVFTE----ERARFYGAEIVSA 117
Query: 318 LAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAP 377
L YLH S +++RDI N++L+ + DFG + +D + GT Y+AP
Sbjct: 118 LEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAP 174
Query: 378 ELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
E+ D + GVV E++ G+ P
Sbjct: 175 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 99/203 (48%), Gaps = 20/203 (9%)
Query: 213 IGTGGYGSVYKAQL-PNGKVFALKKLHTSEELAFIKSFKN-EAQVLSQVLHRNIVKL--Y 268
IG G +G VY+A+L +G++ A+KK+ K FKN E Q++ ++ H NIV+L +
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQD------KRFKNRELQIMRKLDHCNIVRLRYF 81
Query: 269 GYCLHKK----CMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHD 324
Y +K + L+ +Y+ H + L + + +LAY+H
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH-- 139
Query: 325 CSPSIIHRDISSNNILLNSKLEAF-VADFGTARLLHADSSNRTLLAGTYGYIAPELAYTM 383
S I HRDI N+LL+ + DFG+A+ L N + + Y Y APEL +
Sbjct: 140 -SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAPELIFGA 197
Query: 384 V-MTEKCDVYSFGVVTLEVLMGK 405
T DV+S G V E+L+G+
Sbjct: 198 TDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 93/210 (44%), Gaps = 19/210 (9%)
Query: 206 DFDIRYCIGTGGYGSVYKA-QLPNGKVFALKKLH-----TSEELAFIKSFKNEAQVLSQV 259
DFD +G G +G V + G+ +A+K L +E+A + E++VL
Sbjct: 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVT---ESRVLQNT 62
Query: 260 LHRNIVKL-YGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKA-MAHA 317
H + L Y + H + F++ EY G LF +L E +R A + A
Sbjct: 63 RHPFLTALKYAFQTHDRLCFVM-EYANGGELFFHLSRERVFTE----ERARFYGAEIVSA 117
Query: 318 LAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAP 377
L YLH S +++RDI N++L+ + DFG + +D + GT Y+AP
Sbjct: 118 LEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAP 174
Query: 378 ELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
E+ D + GVV E++ G+ P
Sbjct: 175 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 99/203 (48%), Gaps = 20/203 (9%)
Query: 213 IGTGGYGSVYKAQL-PNGKVFALKKLHTSEELAFIKSFKN-EAQVLSQVLHRNIVKL--Y 268
IG G +G VY+A+L +G++ A+KK+ K FKN E Q++ ++ H NIV+L +
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQD------KRFKNRELQIMRKLDHCNIVRLRYF 81
Query: 269 GYCLHKK----CMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHD 324
Y +K + L+ +Y+ H + L + + +LAY+H
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH-- 139
Query: 325 CSPSIIHRDISSNNILLNSKLEAF-VADFGTARLLHADSSNRTLLAGTYGYIAPELAYTM 383
S I HRDI N+LL+ + DFG+A+ L N + + Y Y APEL +
Sbjct: 140 -SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAPELIFGA 197
Query: 384 V-MTEKCDVYSFGVVTLEVLMGK 405
T DV+S G V E+L+G+
Sbjct: 198 TDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 99/203 (48%), Gaps = 20/203 (9%)
Query: 213 IGTGGYGSVYKAQL-PNGKVFALKKLHTSEELAFIKSFKN-EAQVLSQVLHRNIVKL--Y 268
IG G +G VY+A+L +G++ A+KK+ K FKN E Q++ ++ H NIV+L +
Sbjct: 36 IGNGSFGVVYQAKLCDSGELVAIKKVLQD------KRFKNRELQIMRKLDHCNIVRLRYF 89
Query: 269 GYCLHKK----CMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHD 324
Y +K + L+ +Y+ H + L + + +LAY+H
Sbjct: 90 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH-- 147
Query: 325 CSPSIIHRDISSNNILLNSKLEAF-VADFGTARLLHADSSNRTLLAGTYGYIAPELAYTM 383
S I HRDI N+LL+ + DFG+A+ L N + + Y Y APEL +
Sbjct: 148 -SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAPELIFGA 205
Query: 384 V-MTEKCDVYSFGVVTLEVLMGK 405
T DV+S G V E+L+G+
Sbjct: 206 TDYTSSIDVWSAGCVLAELLLGQ 228
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 93/210 (44%), Gaps = 19/210 (9%)
Query: 206 DFDIRYCIGTGGYGSVYKA-QLPNGKVFALKKLH-----TSEELAFIKSFKNEAQVLSQV 259
DFD +G G +G V + G+ +A+K L +E+A + E++VL
Sbjct: 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVT---ESRVLQNT 62
Query: 260 LHRNIVKL-YGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKA-MAHA 317
H + L Y + H + F++ EY G LF +L E +R A + A
Sbjct: 63 RHPFLTALKYAFQTHDRLCFVM-EYANGGELFFHLSRERVFTE----ERARFYGAEIVSA 117
Query: 318 LAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAP 377
L YLH S +++RDI N++L+ + DFG + +D + GT Y+AP
Sbjct: 118 LEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAP 174
Query: 378 ELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
E+ D + GVV E++ G+ P
Sbjct: 175 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 99/203 (48%), Gaps = 20/203 (9%)
Query: 213 IGTGGYGSVYKAQL-PNGKVFALKKLHTSEELAFIKSFKN-EAQVLSQVLHRNIVKL--Y 268
IG G +G VY+A+L +G++ A+KK+ K FKN E Q++ ++ H NIV+L +
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQD------KRFKNRELQIMRKLDHCNIVRLRYF 81
Query: 269 GYCLHKK----CMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHD 324
Y +K + L+ +Y+ H + L + + +LAY+H
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH-- 139
Query: 325 CSPSIIHRDISSNNILLNSKLEAF-VADFGTARLLHADSSNRTLLAGTYGYIAPELAYTM 383
S I HRDI N+LL+ + DFG+A+ L N + + Y Y APEL +
Sbjct: 140 -SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YRAPELIFGA 197
Query: 384 V-MTEKCDVYSFGVVTLEVLMGK 405
T DV+S G V E+L+G+
Sbjct: 198 TDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 93/210 (44%), Gaps = 19/210 (9%)
Query: 206 DFDIRYCIGTGGYGSVYKA-QLPNGKVFALKKLH-----TSEELAFIKSFKNEAQVLSQV 259
DFD +G G +G V + G+ +A+K L +E+A + E++VL
Sbjct: 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVT---ESRVLQNT 62
Query: 260 LHRNIVKL-YGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKA-MAHA 317
H + L Y + H + F++ EY G LF +L E +R A + A
Sbjct: 63 RHPFLTALKYAFQTHDRLCFVM-EYANGGELFFHLSRERVFTE----ERARFYGAEIVSA 117
Query: 318 LAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAP 377
L YLH S +++RDI N++L+ + DFG + +D + GT Y+AP
Sbjct: 118 LEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAP 174
Query: 378 ELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
E+ D + GVV E++ G+ P
Sbjct: 175 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 98/207 (47%), Gaps = 16/207 (7%)
Query: 203 ATEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFK-NEAQVLSQVL 260
+ E+F IG G YG VYKA+ G+V ALKK+ E + S E +L ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 261 HRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKA----MAH 316
H NIVKL + ++L++E++ +L + DA L + ++K+ +
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLS-----MDLKDFMDASALT-GIPLPLIKSYLFQLLQ 117
Query: 317 ALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIA 376
LA+ H S ++HRD+ N+L+N++ +ADFG AR T Y A
Sbjct: 118 GLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 174
Query: 377 PE-LAYTMVMTEKCDVYSFGVVTLEVL 402
PE L + D++S G + E++
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMV 201
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 99/203 (48%), Gaps = 20/203 (9%)
Query: 213 IGTGGYGSVYKAQL-PNGKVFALKKLHTSEELAFIKSFKN-EAQVLSQVLHRNIVKL--Y 268
IG G +G VY+A+L +G++ A+KK+ K FKN E Q++ ++ H NIV+L +
Sbjct: 47 IGNGSFGVVYQAKLCDSGELVAIKKVLQD------KRFKNRELQIMRKLDHCNIVRLRYF 100
Query: 269 GYCLHKK----CMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHD 324
Y +K + L+ +Y+ H + L + + +LAY+H
Sbjct: 101 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH-- 158
Query: 325 CSPSIIHRDISSNNILLNSKLEAF-VADFGTARLLHADSSNRTLLAGTYGYIAPELAYTM 383
S I HRDI N+LL+ + DFG+A+ L N + + Y Y APEL +
Sbjct: 159 -SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAPELIFGA 216
Query: 384 V-MTEKCDVYSFGVVTLEVLMGK 405
T DV+S G V E+L+G+
Sbjct: 217 TDYTSSIDVWSAGCVLAELLLGQ 239
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 98/222 (44%), Gaps = 32/222 (14%)
Query: 213 IGTGGYGSVYKAQL-------PNGKVFA----LKKLHTSEELAFIKSFKNEAQVLSQVLH 261
+G G +G V A+ P V LK T E+L+ + S +++ + H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGK--H 100
Query: 262 RNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLH-------------NNEDAVELDWAKRV 308
+NI+ L G C +++I EY +G+L L N ++ + V
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 309 NIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLL 368
+ +A + YL S IHRD+++ N+L+ +ADFG AR ++ +
Sbjct: 161 SCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 217
Query: 369 AGT--YGYIAPELAYTMVMTEKCDVYSFGVVTLEVL-MGKHP 407
G ++APE + V T + DV+SFGV+ E+ +G P
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 99/203 (48%), Gaps = 20/203 (9%)
Query: 213 IGTGGYGSVYKAQL-PNGKVFALKKLHTSEELAFIKSFKN-EAQVLSQVLHRNIVKL--Y 268
IG G +G VY+A+L +G++ A+KK+ K FKN E Q++ ++ H NIV+L +
Sbjct: 29 IGNGSFGVVYQAKLCDSGELVAIKKVLQD------KRFKNRELQIMRKLDHCNIVRLRYF 82
Query: 269 GYCLHKK----CMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHD 324
Y +K + L+ +Y+ H + L + + +LAY+H
Sbjct: 83 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH-- 140
Query: 325 CSPSIIHRDISSNNILLNSKLEAF-VADFGTARLLHADSSNRTLLAGTYGYIAPELAYTM 383
S I HRDI N+LL+ + DFG+A+ L N + + Y Y APEL +
Sbjct: 141 -SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAPELIFGA 198
Query: 384 V-MTEKCDVYSFGVVTLEVLMGK 405
T DV+S G V E+L+G+
Sbjct: 199 TDYTSSIDVWSAGCVLAELLLGQ 221
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 98/207 (47%), Gaps = 16/207 (7%)
Query: 203 ATEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFK-NEAQVLSQVL 260
+ E+F IG G YG VYKA+ G+V ALKK+ E + S E +L ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 261 HRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKA----MAH 316
H NIVKL + ++L++E++ + +L DA L + ++K+ +
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQ-----DLKTFMDASALT-GIPLPLIKSYLFQLLQ 117
Query: 317 ALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIA 376
LA+ H S ++HRD+ N+L+N++ +ADFG AR T Y A
Sbjct: 118 GLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 174
Query: 377 PE-LAYTMVMTEKCDVYSFGVVTLEVL 402
PE L + D++S G + E++
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMV 201
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 99/203 (48%), Gaps = 20/203 (9%)
Query: 213 IGTGGYGSVYKAQL-PNGKVFALKKLHTSEELAFIKSFKN-EAQVLSQVLHRNIVKL--Y 268
IG G +G VY+A+L +G++ A+KK+ K FKN E Q++ ++ H NIV+L +
Sbjct: 41 IGNGSFGVVYQAKLCDSGELVAIKKVLQD------KRFKNRELQIMRKLDHCNIVRLRYF 94
Query: 269 GYCLHKK----CMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHD 324
Y +K + L+ +Y+ H + L + + +LAY+H
Sbjct: 95 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH-- 152
Query: 325 CSPSIIHRDISSNNILLNSKLEAF-VADFGTARLLHADSSNRTLLAGTYGYIAPELAYTM 383
S I HRDI N+LL+ + DFG+A+ L N + + Y Y APEL +
Sbjct: 153 -SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YRAPELIFGA 210
Query: 384 V-MTEKCDVYSFGVVTLEVLMGK 405
T DV+S G V E+L+G+
Sbjct: 211 TDYTSSIDVWSAGCVLAELLLGQ 233
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 98/207 (47%), Gaps = 16/207 (7%)
Query: 203 ATEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFK-NEAQVLSQVL 260
+ E+F IG G YG VYKA+ G+V ALKK+ E + S E +L ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 261 HRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKA----MAH 316
H NIVKL + ++L++E++ + +L DA L + ++K+ +
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQ-----DLKKFMDASALT-GIPLPLIKSYLFQLLQ 117
Query: 317 ALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIA 376
LA+ H S ++HRD+ N+L+N++ +ADFG AR T Y A
Sbjct: 118 GLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 174
Query: 377 PE-LAYTMVMTEKCDVYSFGVVTLEVL 402
PE L + D++S G + E++
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMV 201
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 98/207 (47%), Gaps = 16/207 (7%)
Query: 203 ATEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFK-NEAQVLSQVL 260
+ E+F IG G YG VYKA+ G+V ALKK+ E + S E +L ++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 261 HRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKA----MAH 316
H NIVKL + ++L++E++ + +L DA L + ++K+ +
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQ-----DLKKFMDASALT-GIPLPLIKSYLFQLLQ 116
Query: 317 ALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIA 376
LA+ H S ++HRD+ N+L+N++ +ADFG AR T Y A
Sbjct: 117 GLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 173
Query: 377 PE-LAYTMVMTEKCDVYSFGVVTLEVL 402
PE L + D++S G + E++
Sbjct: 174 PEILLGCKYYSTAVDIWSLGCIFAEMV 200
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 98/207 (47%), Gaps = 16/207 (7%)
Query: 203 ATEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFK-NEAQVLSQVL 260
+ E+F IG G YG VYKA+ G+V ALKK+ E + S E +L ++
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 64
Query: 261 HRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKA----MAH 316
H NIVKL + ++L++E++ + +L DA L + ++K+ +
Sbjct: 65 HPNIVKLLDVIHTENKLYLVFEFLHQ-----DLKKFMDASALT-GIPLPLIKSYLFQLLQ 118
Query: 317 ALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIA 376
LA+ H S ++HRD+ N+L+N++ +ADFG AR T Y A
Sbjct: 119 GLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 175
Query: 377 PE-LAYTMVMTEKCDVYSFGVVTLEVL 402
PE L + D++S G + E++
Sbjct: 176 PEILLGCKYYSTAVDIWSLGCIFAEMV 202
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 99/207 (47%), Gaps = 16/207 (7%)
Query: 203 ATEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFK-NEAQVLSQVL 260
+ E+F IG G YG VYKA+ G+V ALKK+ E + S E +L ++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 261 HRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKA----MAH 316
H NIVKL + ++L++E++ + +L + DA L + ++K+ +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQ-----DLKDFMDASALT-GIPLPLIKSYLFQLLQ 114
Query: 317 ALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIA 376
LA+ H S ++HRD+ N+L+N++ +ADFG AR T Y A
Sbjct: 115 GLAFCH---SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 171
Query: 377 PE-LAYTMVMTEKCDVYSFGVVTLEVL 402
PE L + D++S G + E++
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMV 198
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 99/203 (48%), Gaps = 20/203 (9%)
Query: 213 IGTGGYGSVYKAQL-PNGKVFALKKLHTSEELAFIKSFKN-EAQVLSQVLHRNIVKL--Y 268
IG G +G VY+A+L +G++ A+KK+ K FKN E Q++ ++ H NIV+L +
Sbjct: 40 IGNGSFGVVYQAKLCDSGELVAIKKVLQD------KRFKNRELQIMRKLDHCNIVRLRYF 93
Query: 269 GYCLHKK----CMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHD 324
Y +K + L+ +Y+ H + L + + +LAY+H
Sbjct: 94 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH-- 151
Query: 325 CSPSIIHRDISSNNILLNSKLEAF-VADFGTARLLHADSSNRTLLAGTYGYIAPELAYTM 383
S I HRDI N+LL+ + DFG+A+ L N + + Y Y APEL +
Sbjct: 152 -SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAPELIFGA 209
Query: 384 V-MTEKCDVYSFGVVTLEVLMGK 405
T DV+S G V E+L+G+
Sbjct: 210 TDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 93/210 (44%), Gaps = 19/210 (9%)
Query: 206 DFDIRYCIGTGGYGSVYKA-QLPNGKVFALKKLH-----TSEELAFIKSFKNEAQVLSQV 259
DFD +G G +G V + G+ +A+K L +E+A + E++VL
Sbjct: 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVT---ESRVLQNT 62
Query: 260 LHRNIVKL-YGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKA-MAHA 317
H + L Y + H + F++ EY G LF +L E +R A + A
Sbjct: 63 RHPFLTALKYAFQTHDRLCFVM-EYANGGELFFHLSRERVFTE----ERARFYGAEIVSA 117
Query: 318 LAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAP 377
L YLH S +++RDI N++L+ + DFG + +D + GT Y+AP
Sbjct: 118 LEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAP 174
Query: 378 ELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
E+ D + GVV E++ G+ P
Sbjct: 175 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 119/294 (40%), Gaps = 38/294 (12%)
Query: 213 IGTGGYGSVYKAQL------PNGKVFALKKL----HTSEELAFIKSFKNEAQVLSQVLHR 262
+G G +G VY+ Q+ P+ A+K L +EL F+ EA ++S+ H+
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM----EALIISKFNHQ 120
Query: 263 NIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNE----DAVELDWAKRVNIVKAMAHAL 318
NIV+ G L F++ E M G L L L +++ + +A
Sbjct: 121 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 180
Query: 319 AYLHHDCSPSIIHRDISSNNILLNSKLEAFVA---DFGTARLLHADSSNRTLLAGTY--G 373
YL + IHRDI++ N LL VA DFG AR ++ S R
Sbjct: 181 QYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 237
Query: 374 YIAPELAYTMVMTEKCDVYSFGVVTLEVL-MGKHPRDIXXXXXXXXDPKIMLIDVLDQRL 432
++ PE + T K D +SFGV+ E+ +G P + +++ R+
Sbjct: 238 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP------YPSKSNQEVLEFVTSGGRM 291
Query: 433 PPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTPLVKHAAI 486
PP + + I T C Q P+ RP + + + P V + A+
Sbjct: 292 DPP--KNCPGPVYRIMT---QCWQHQPEDRPNFAIILERIEYCTQDPDVINTAL 340
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 97/225 (43%), Gaps = 32/225 (14%)
Query: 206 DFDIRYCIGTGGYGSVYKAQLPNGKV---FALKKLHTSEELAFIKSFKNEAQVLSQVLHR 262
D + IG G +G V KA++ + A+K++ + F E +VL ++ H
Sbjct: 16 DIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHH 75
Query: 263 -NIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHN-------------NEDAVELDWAKRV 308
NI+ L G C H+ ++L EY G+L L N A L + +
Sbjct: 76 PNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLL 135
Query: 309 NIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLL 368
+ +A + YL IHRD+++ NIL+ A +ADFG +R +
Sbjct: 136 HFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGLSR------GQEVYV 186
Query: 369 AGTYG-----YIAPELAYTMVMTEKCDVYSFGVVTLEVL-MGKHP 407
T G ++A E V T DV+S+GV+ E++ +G P
Sbjct: 187 KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTP 231
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 98/207 (47%), Gaps = 16/207 (7%)
Query: 203 ATEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFK-NEAQVLSQVL 260
+ E+F IG G YG VYKA+ G+V ALKK+ E + S E +L ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 261 HRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKA----MAH 316
H NIVKL + ++L++E++ + +L DA L + ++K+ +
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQ-----DLKKFMDASALT-GIPLPLIKSYLFQLLQ 117
Query: 317 ALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIA 376
LA+ H S ++HRD+ N+L+N++ +ADFG AR T Y A
Sbjct: 118 GLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 174
Query: 377 PE-LAYTMVMTEKCDVYSFGVVTLEVL 402
PE L + D++S G + E++
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMV 201
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 98/207 (47%), Gaps = 16/207 (7%)
Query: 203 ATEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFK-NEAQVLSQVL 260
+ E+F IG G YG VYKA+ G+V ALKK+ E + S E +L ++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 261 HRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKA----MAH 316
H NIVKL + ++L++E++ + +L DA L + ++K+ +
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQ-----DLKKFMDASALT-GIPLPLIKSYLFQLLQ 116
Query: 317 ALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIA 376
LA+ H S ++HRD+ N+L+N++ +ADFG AR T Y A
Sbjct: 117 GLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 173
Query: 377 PE-LAYTMVMTEKCDVYSFGVVTLEVL 402
PE L + D++S G + E++
Sbjct: 174 PEILLGCKYYSTAVDIWSLGCIFAEMV 200
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 99/203 (48%), Gaps = 20/203 (9%)
Query: 213 IGTGGYGSVYKAQL-PNGKVFALKKLHTSEELAFIKSFKN-EAQVLSQVLHRNIVKL--Y 268
IG G +G VY+A+L +G++ A+KK+ K FKN E Q++ ++ H NIV+L +
Sbjct: 32 IGNGSFGVVYQAKLCDSGELVAIKKVLQD------KRFKNRELQIMRKLDHCNIVRLRYF 85
Query: 269 GYCLHKK----CMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHD 324
Y +K + L+ +Y+ H + L + + +LAY+H
Sbjct: 86 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH-- 143
Query: 325 CSPSIIHRDISSNNILLNSKLEAF-VADFGTARLLHADSSNRTLLAGTYGYIAPELAYTM 383
S I HRDI N+LL+ + DFG+A+ L N + + Y Y APEL +
Sbjct: 144 -SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAPELIFGA 201
Query: 384 V-MTEKCDVYSFGVVTLEVLMGK 405
T DV+S G V E+L+G+
Sbjct: 202 TDYTSSIDVWSAGCVLAELLLGQ 224
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 93/215 (43%), Gaps = 20/215 (9%)
Query: 203 ATEDFDIRYCIGTGGYGSVYKA-------QLPNGKVFALKKLHTSEELAFIKSFKNEAQV 255
A E + +G G +G VY+ P +V A+K ++ + + F NEA V
Sbjct: 13 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRV-AIKTVNEAASMRERIEFLNEASV 71
Query: 256 LSQVLHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLH-------NNEDAVELDWAKRV 308
+ + ++V+L G + +I E M RG L L NN +K +
Sbjct: 72 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMI 131
Query: 309 NIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLL 368
+ +A +AYL+ + +HRD+++ N ++ + DFG R ++ R
Sbjct: 132 QMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGG 188
Query: 369 AG--TYGYIAPELAYTMVMTEKCDVYSFGVVTLEV 401
G +++PE V T DV+SFGVV E+
Sbjct: 189 KGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 223
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 89/200 (44%), Gaps = 15/200 (7%)
Query: 213 IGTGGYGSV----YKAQLPN-GKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKL 267
+G G +G V Y + N G+ A+K L I K E ++L + H NIVK
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 268 YGYCLHK--KCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDC 325
G C + LI E++ GSL L N++ + L +++ + + YL
Sbjct: 77 KGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINL--KQQLKYAVQICKGMDYLG--- 131
Query: 326 SPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYG---YIAPELAYT 382
S +HRD+++ N+L+ S+ + + DFG + + D T+ + APE
Sbjct: 132 SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQ 191
Query: 383 MVMTEKCDVYSFGVVTLEVL 402
DV+SFGV E+L
Sbjct: 192 SKFYIASDVWSFGVTLHELL 211
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 99/215 (46%), Gaps = 22/215 (10%)
Query: 203 ATEDFDIRY-------CIGTGGYGSVYKA-----QLPNGKVFALKKLHTSEELAFIKSFK 250
+T D++I+ CIG G +G V++ + P V A+K + + F
Sbjct: 1 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAV-AIKTCKNCTSDSVREKFL 59
Query: 251 NEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNI 310
EA + Q H +IVKL G + + +++I E G L L + LD A +
Sbjct: 60 QEALTMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRK--YSLDLASLILY 116
Query: 311 VKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAG 370
++ ALAYL S +HRDI++ N+L++S + DFG +R + DS+ G
Sbjct: 117 AYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKG 172
Query: 371 TY--GYIAPELAYTMVMTEKCDVYSFGVVTLEVLM 403
++APE T DV+ FGV E+LM
Sbjct: 173 KLPIKWMAPESINFRRFTSASDVWMFGVCMWEILM 207
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 96/220 (43%), Gaps = 28/220 (12%)
Query: 213 IGTGGYGSVYKAQL-------PNGKV-FALKKLHTSEELAFIKSFKNEAQVLSQV-LHRN 263
+G G +G V A+ P V A+K L + +E +++ + H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 264 IVKLYGYCLHKKCMFLIYEYMERGSLFCNLH-------------NNEDAVELDWAKRVNI 310
I+ L G C +++I EY +G+L L N ++ + V+
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 311 VKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAG 370
+A + YL S IHRD+++ N+L+ +ADFG AR ++ + G
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTNG 219
Query: 371 T--YGYIAPELAYTMVMTEKCDVYSFGVVTLEVL-MGKHP 407
++APE + V T + DV+SFGV+ E+ +G P
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 98/207 (47%), Gaps = 16/207 (7%)
Query: 203 ATEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFK-NEAQVLSQVL 260
+ E+F IG G YG VYKA+ G+V ALKK+ E + S E +L ++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 261 HRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKA----MAH 316
H NIVKL + ++L++E++ + +L DA L + ++K+ +
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQ-----DLKKFMDASALT-GIPLPLIKSYLFQLLQ 115
Query: 317 ALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIA 376
LA+ H S ++HRD+ N+L+N++ +ADFG AR T Y A
Sbjct: 116 GLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 172
Query: 377 PE-LAYTMVMTEKCDVYSFGVVTLEVL 402
PE L + D++S G + E++
Sbjct: 173 PEILLGCKYYSTAVDIWSLGCIFAEMV 199
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 99/200 (49%), Gaps = 11/200 (5%)
Query: 213 IGTGGYGSVYKAQLPNGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLHRNIVKLYGY 270
+GT G + + QL KV A+K L+ + L + K E Q L H +I+KLY
Sbjct: 21 VGTFGKVKIGEHQLTGHKV-AVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQV 79
Query: 271 CLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSII 330
F++ EY+ G LF + + E++ A+R + + + A+ Y H ++
Sbjct: 80 ISTPTDFFMVMEYVSGGELFDYICKHGRVEEME-ARR--LFQQILSAVDYCHRHM---VV 133
Query: 331 HRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPE-LAYTMVMTEKC 389
HRD+ N+LL++ + A +ADFG + ++ +D G+ Y APE ++ + +
Sbjct: 134 HRDLKPENVLLDAHMNAKIADFGLSNMM-SDGEFLRDSCGSPNYAAPEVISGRLYAGPEV 192
Query: 390 DVYSFGVVTLEVLMGKHPRD 409
D++S GV+ +L G P D
Sbjct: 193 DIWSCGVILYALLCGTLPFD 212
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 98/207 (47%), Gaps = 16/207 (7%)
Query: 203 ATEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFK-NEAQVLSQVL 260
+ E+F IG G YG VYKA+ G+V ALKK+ E + S E +L ++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 261 HRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKA----MAH 316
H NIVKL + ++L++E++ +L + DA L + ++K+ +
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLS-----MDLKDFMDASALT-GIPLPLIKSYLFQLLQ 116
Query: 317 ALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIA 376
LA+ H S ++HRD+ N+L+N++ +ADFG AR T Y A
Sbjct: 117 GLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 173
Query: 377 PE-LAYTMVMTEKCDVYSFGVVTLEVL 402
PE L + D++S G + E++
Sbjct: 174 PEILLGCKYYSTAVDIWSLGCIFAEMV 200
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 93/210 (44%), Gaps = 19/210 (9%)
Query: 206 DFDIRYCIGTGGYGSVYKA-QLPNGKVFALKKLH-----TSEELAFIKSFKNEAQVLSQV 259
DFD +G G +G V + G+ +A+K L +E+A + E++VL
Sbjct: 9 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVT---ESRVLQNT 65
Query: 260 LHRNIVKL-YGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKA-MAHA 317
H + L Y + H + F++ EY G LF +L E +R A + A
Sbjct: 66 RHPFLTALKYAFQTHDRLCFVM-EYANGGELFFHLSRERVFTE----ERARFYGAEIVSA 120
Query: 318 LAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAP 377
L YLH S +++RDI N++L+ + DFG + +D + GT Y+AP
Sbjct: 121 LEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAP 177
Query: 378 ELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
E+ D + GVV E++ G+ P
Sbjct: 178 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 207
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 99/203 (48%), Gaps = 20/203 (9%)
Query: 213 IGTGGYGSVYKAQL-PNGKVFALKKLHTSEELAFIKSFKN-EAQVLSQVLHRNIVKL--Y 268
IG G +G VY+A+L +G++ A+KK+ K FKN E Q++ ++ H NIV+L +
Sbjct: 40 IGNGSFGVVYQAKLCDSGELVAIKKVLQD------KRFKNRELQIMRKLDHCNIVRLRYF 93
Query: 269 GYCLHKK----CMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHD 324
Y +K + L+ +Y+ H + L + + +LAY+H
Sbjct: 94 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH-- 151
Query: 325 CSPSIIHRDISSNNILLNSKLEAF-VADFGTARLLHADSSNRTLLAGTYGYIAPELAYTM 383
S I HRDI N+LL+ + DFG+A+ L N + + Y Y APEL +
Sbjct: 152 -SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAPELIFGA 209
Query: 384 V-MTEKCDVYSFGVVTLEVLMGK 405
T DV+S G V E+L+G+
Sbjct: 210 TDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 96/220 (43%), Gaps = 28/220 (12%)
Query: 213 IGTGGYGSVYKAQL-------PNGKV-FALKKLHTSEELAFIKSFKNEAQVLSQV-LHRN 263
+G G +G V A+ P V A+K L + +E +++ + H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 264 IVKLYGYCLHKKCMFLIYEYMERGSLFCNLH-------------NNEDAVELDWAKRVNI 310
I+ L G C +++I EY +G+L L N ++ + V+
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 311 VKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAG 370
+A + YL S IHRD+++ N+L+ +ADFG AR ++ + G
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTNG 219
Query: 371 T--YGYIAPELAYTMVMTEKCDVYSFGVVTLEVL-MGKHP 407
++APE + V T + DV+SFGV+ E+ +G P
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 97/225 (43%), Gaps = 32/225 (14%)
Query: 206 DFDIRYCIGTGGYGSVYKAQLPNGKV---FALKKLHTSEELAFIKSFKNEAQVLSQVLHR 262
D + IG G +G V KA++ + A+K++ + F E +VL ++ H
Sbjct: 26 DIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHH 85
Query: 263 -NIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHN-------------NEDAVELDWAKRV 308
NI+ L G C H+ ++L EY G+L L N A L + +
Sbjct: 86 PNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLL 145
Query: 309 NIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLL 368
+ +A + YL IHRD+++ NIL+ A +ADFG +R +
Sbjct: 146 HFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGLSR------GQEVYV 196
Query: 369 AGTYG-----YIAPELAYTMVMTEKCDVYSFGVVTLEVL-MGKHP 407
T G ++A E V T DV+S+GV+ E++ +G P
Sbjct: 197 KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTP 241
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 101/227 (44%), Gaps = 36/227 (15%)
Query: 191 YDGRIVYEDLIEATEDFDIRYCIGTGGYGSVYKA-QLPNGKVFALKKLHT--SEELAFIK 247
++ R VY DL +G+G YG+V A G A+KKL+ EL F K
Sbjct: 21 WEVRAVYRDL----------QPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSEL-FAK 69
Query: 248 SFKNEAQVLSQVLHRNIVKLYGYCLHKKCM------FLIYEYM--ERGSLFCNLHNNEDA 299
E ++L + H N++ L + + +L+ +M + G L + ED
Sbjct: 70 RAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDR 129
Query: 300 VELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLH 359
++ +V M L Y+H + IIHRD+ N+ +N E + DFG AR
Sbjct: 130 IQF-------LVYQMLKGLRYIH---AAGIIHRDLKPGNLAVNEDCELKILDFGLAR--Q 177
Query: 360 ADSSNRTLLAGTYGYIAPELAYT-MVMTEKCDVYSFGVVTLEVLMGK 405
ADS + T Y APE+ M T+ D++S G + E++ GK
Sbjct: 178 ADSEMXGXVV-TRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 98/207 (47%), Gaps = 16/207 (7%)
Query: 203 ATEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFK-NEAQVLSQVL 260
+ E+F IG G YG VYKA+ G+V ALKK+ E + S E +L ++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 261 HRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKA----MAH 316
H NIVKL + ++L++E++ + +L DA L + ++K+ +
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQ-----DLKKFMDASALT-GIPLPLIKSYLFQLLQ 116
Query: 317 ALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIA 376
LA+ H S ++HRD+ N+L+N++ +ADFG AR T Y A
Sbjct: 117 GLAFCH---SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 173
Query: 377 PE-LAYTMVMTEKCDVYSFGVVTLEVL 402
PE L + D++S G + E++
Sbjct: 174 PEILLGCKYYSTAVDIWSLGCIFAEMV 200
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 99/215 (46%), Gaps = 22/215 (10%)
Query: 203 ATEDFDIRY-------CIGTGGYGSVYKA-----QLPNGKVFALKKLHTSEELAFIKSFK 250
+T D++I+ CIG G +G V++ + P V A+K + + F
Sbjct: 381 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAV-AIKTCKNCTSDSVREKFL 439
Query: 251 NEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNI 310
EA + Q H +IVKL G + + +++I E G L L + LD A +
Sbjct: 440 QEALTMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRK--FSLDLASLILY 496
Query: 311 VKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAG 370
++ ALAYL S +HRDI++ N+L++S + DFG +R + DS+ G
Sbjct: 497 AYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKG 552
Query: 371 TY--GYIAPELAYTMVMTEKCDVYSFGVVTLEVLM 403
++APE T DV+ FGV E+LM
Sbjct: 553 KLPIKWMAPESINFRRFTSASDVWMFGVCMWEILM 587
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 98/207 (47%), Gaps = 16/207 (7%)
Query: 203 ATEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFK-NEAQVLSQVL 260
+ E+F IG G YG VYKA+ G+V ALKK+ E + S E +L ++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 261 HRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKA----MAH 316
H NIVKL + ++L++E++ + +L DA L + ++K+ +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQ-----DLKKFMDASALT-GIPLPLIKSYLFQLLQ 114
Query: 317 ALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIA 376
LA+ H S ++HRD+ N+L+N++ +ADFG AR T Y A
Sbjct: 115 GLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 171
Query: 377 PE-LAYTMVMTEKCDVYSFGVVTLEVL 402
PE L + D++S G + E++
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMV 198
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 99/203 (48%), Gaps = 20/203 (9%)
Query: 213 IGTGGYGSVYKAQL-PNGKVFALKKLHTSEELAFIKSFKN-EAQVLSQVLHRNIVKL--Y 268
IG G +G VY+A+L +G++ A+KK+ K FKN E Q++ ++ H NIV+L +
Sbjct: 33 IGNGSFGVVYQAKLCDSGELVAIKKVLQD------KRFKNRELQIMRKLDHCNIVRLRYF 86
Query: 269 GYCLHKK----CMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHD 324
Y +K + L+ +Y+ H + L + + +LAY+H
Sbjct: 87 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH-- 144
Query: 325 CSPSIIHRDISSNNILLNSKLEAF-VADFGTARLLHADSSNRTLLAGTYGYIAPELAYTM 383
S I HRDI N+LL+ + DFG+A+ L N + + Y Y APEL +
Sbjct: 145 -SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YRAPELIFGA 202
Query: 384 V-MTEKCDVYSFGVVTLEVLMGK 405
T DV+S G V E+L+G+
Sbjct: 203 TDYTSSIDVWSAGCVLAELLLGQ 225
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 98/207 (47%), Gaps = 16/207 (7%)
Query: 203 ATEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFK-NEAQVLSQVL 260
+ E+F IG G YG VYKA+ G+V ALKK+ E + S E +L ++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 261 HRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKA----MAH 316
H NIVKL + ++L++E++ + +L DA L + ++K+ +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQ-----DLKKFMDASALT-GIPLPLIKSYLFQLLQ 114
Query: 317 ALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIA 376
LA+ H S ++HRD+ N+L+N++ +ADFG AR T Y A
Sbjct: 115 GLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 171
Query: 377 PE-LAYTMVMTEKCDVYSFGVVTLEVL 402
PE L + D++S G + E++
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMV 198
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 98/203 (48%), Gaps = 20/203 (9%)
Query: 213 IGTGGYGSVYKAQL-PNGKVFALKKLHTSEELAFIKSFKN-EAQVLSQVLHRNIVKL--- 267
IG G +G VY+A+L +G++ A+KK+ K FKN E Q++ ++ H NIV+L
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAIKKVLQD------KRFKNRELQIMRKLDHCNIVRLRYF 115
Query: 268 -YGYCLHKKCMF--LIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHD 324
Y K ++ L+ +Y+ H + L + + +LAY+H
Sbjct: 116 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH-- 173
Query: 325 CSPSIIHRDISSNNILLNSKLEAF-VADFGTARLLHADSSNRTLLAGTYGYIAPELAYTM 383
S I HRDI N+LL+ + DFG+A+ L N + + Y Y APEL +
Sbjct: 174 -SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAPELIFGA 231
Query: 384 V-MTEKCDVYSFGVVTLEVLMGK 405
T DV+S G V E+L+G+
Sbjct: 232 TDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 97/214 (45%), Gaps = 20/214 (9%)
Query: 203 ATEDFDIRY-------CIGTGGYGSVYKA--QLPNGKVFA--LKKLHTSEELAFIKSFKN 251
+T D++I+ CIG G +G V++ P A +K + + F
Sbjct: 1 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQ 60
Query: 252 EAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIV 311
EA + Q H +IVKL G + + +++I E G L L + LD A +
Sbjct: 61 EALTMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRK--YSLDLASLILYA 117
Query: 312 KAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGT 371
++ ALAYL S +HRDI++ N+L++S + DFG +R + DS+ G
Sbjct: 118 YQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGK 173
Query: 372 Y--GYIAPELAYTMVMTEKCDVYSFGVVTLEVLM 403
++APE T DV+ FGV E+LM
Sbjct: 174 LPIKWMAPESINFRRFTSASDVWMFGVCMWEILM 207
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 99/203 (48%), Gaps = 20/203 (9%)
Query: 213 IGTGGYGSVYKAQL-PNGKVFALKKLHTSEELAFIKSFKN-EAQVLSQVLHRNIVKL--Y 268
IG G +G VY+A+L +G++ A+KK+ K FKN E Q++ ++ H NIV+L +
Sbjct: 56 IGNGSFGVVYQAKLCDSGELVAIKKVLQD------KRFKNRELQIMRKLDHCNIVRLRYF 109
Query: 269 GYCLHKK----CMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHD 324
Y +K + L+ +Y+ H + L + + +LAY+H
Sbjct: 110 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH-- 167
Query: 325 CSPSIIHRDISSNNILLNSKLEAF-VADFGTARLLHADSSNRTLLAGTYGYIAPELAYTM 383
S I HRDI N+LL+ + DFG+A+ L N + + Y Y APEL +
Sbjct: 168 -SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YRAPELIFGA 225
Query: 384 V-MTEKCDVYSFGVVTLEVLMGK 405
T DV+S G V E+L+G+
Sbjct: 226 TDYTSSIDVWSAGCVLAELLLGQ 248
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 99/203 (48%), Gaps = 20/203 (9%)
Query: 213 IGTGGYGSVYKAQL-PNGKVFALKKLHTSEELAFIKSFKN-EAQVLSQVLHRNIVKL--Y 268
IG G +G VY+A+L +G++ A+KK+ K FKN E Q++ ++ H NIV+L +
Sbjct: 64 IGNGSFGVVYQAKLCDSGELVAIKKVLQD------KRFKNRELQIMRKLDHCNIVRLRYF 117
Query: 269 GYCLHKK----CMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHD 324
Y +K + L+ +Y+ H + L + + +LAY+H
Sbjct: 118 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH-- 175
Query: 325 CSPSIIHRDISSNNILLNSKLEAF-VADFGTARLLHADSSNRTLLAGTYGYIAPELAYTM 383
S I HRDI N+LL+ + DFG+A+ L N + + Y Y APEL +
Sbjct: 176 -SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YRAPELIFGA 233
Query: 384 V-MTEKCDVYSFGVVTLEVLMGK 405
T DV+S G V E+L+G+
Sbjct: 234 TDYTSSIDVWSAGCVLAELLLGQ 256
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 99/207 (47%), Gaps = 16/207 (7%)
Query: 203 ATEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFK-NEAQVLSQVL 260
+ E+F IG G YG VYKA+ G+V ALKK+ E + S E +L ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 261 HRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKA----MAH 316
H NIVKL + ++L++E++++ +L DA L + ++K+ +
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEHVDQ-----DLKKFMDASALT-GIPLPLIKSYLFQLLQ 117
Query: 317 ALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIA 376
LA+ H S ++HRD+ N+L+N++ +ADFG AR T Y A
Sbjct: 118 GLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 174
Query: 377 PE-LAYTMVMTEKCDVYSFGVVTLEVL 402
PE L + D++S G + E++
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMV 201
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 93/205 (45%), Gaps = 13/205 (6%)
Query: 205 EDFDIRYCIGTGGYGSVYKA--QLPNGKVFA--LKKLHTSEELAFIKSFKNEAQVLSQVL 260
E ++ CIG G +G V++ P A +K + + F EA + Q
Sbjct: 38 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFD 97
Query: 261 HRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAY 320
H +IVKL G + + +++I E G L L + LD A + ++ ALAY
Sbjct: 98 HPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRK--YSLDLASLILYAYQLSTALAY 154
Query: 321 LHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTY--GYIAPE 378
L S +HRDI++ N+L++S + DFG +R + DS+ G ++APE
Sbjct: 155 LE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPE 210
Query: 379 LAYTMVMTEKCDVYSFGVVTLEVLM 403
T DV+ FGV E+LM
Sbjct: 211 SINFRRFTSASDVWMFGVCMWEILM 235
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 98/207 (47%), Gaps = 16/207 (7%)
Query: 203 ATEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFK-NEAQVLSQVL 260
+ E+F IG G YG VYKA+ G+V ALKK+ E + S E +L ++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 261 HRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKA----MAH 316
H NIVKL + ++L++E++ + +L DA L + ++K+ +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQ-----DLKKFMDASALT-GIPLPLIKSYLFQLLQ 114
Query: 317 ALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIA 376
LA+ H S ++HRD+ N+L+N++ +ADFG AR T Y A
Sbjct: 115 GLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 171
Query: 377 PE-LAYTMVMTEKCDVYSFGVVTLEVL 402
PE L + D++S G + E++
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMV 198
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 99/203 (48%), Gaps = 20/203 (9%)
Query: 213 IGTGGYGSVYKAQL-PNGKVFALKKLHTSEELAFIKSFKN-EAQVLSQVLHRNIVKL--Y 268
IG G +G VY+A+L +G++ A+KK+ K FKN E Q++ ++ H NIV+L +
Sbjct: 66 IGNGSFGVVYQAKLCDSGELVAIKKVLQD------KRFKNRELQIMRKLDHCNIVRLRYF 119
Query: 269 GYCLHKK----CMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHD 324
Y +K + L+ +Y+ H + L + + +LAY+H
Sbjct: 120 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH-- 177
Query: 325 CSPSIIHRDISSNNILLNSKLEAF-VADFGTARLLHADSSNRTLLAGTYGYIAPELAYTM 383
S I HRDI N+LL+ + DFG+A+ L N + + Y Y APEL +
Sbjct: 178 -SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YRAPELIFGA 235
Query: 384 V-MTEKCDVYSFGVVTLEVLMGK 405
T DV+S G V E+L+G+
Sbjct: 236 TDYTSSIDVWSAGCVLAELLLGQ 258
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 97/205 (47%), Gaps = 16/205 (7%)
Query: 205 EDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFK-NEAQVLSQVLHR 262
E+F IG G YG VYKA+ G+V ALKK+ E + S E +L ++ H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 263 NIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKA----MAHAL 318
NIVKL + ++L++E++ + +L DA L + ++K+ + L
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQ-----DLKKFMDASALT-GIPLPLIKSYLFQLLQGL 115
Query: 319 AYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPE 378
A+ H S ++HRD+ N+L+N++ +ADFG AR T Y APE
Sbjct: 116 AFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE 172
Query: 379 -LAYTMVMTEKCDVYSFGVVTLEVL 402
L + D++S G + E++
Sbjct: 173 ILLGCKYYSTAVDIWSLGCIFAEMV 197
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 97/205 (47%), Gaps = 16/205 (7%)
Query: 205 EDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFK-NEAQVLSQVLHR 262
E+F IG G YG VYKA+ G+V ALKK+ E + S E +L ++ H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 263 NIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKA----MAHAL 318
NIVKL + ++L++E++ + +L DA L + ++K+ + L
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQ-----DLKKFMDASALT-GIPLPLIKSYLFQLLQGL 115
Query: 319 AYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPE 378
A+ H S ++HRD+ N+L+N++ +ADFG AR T Y APE
Sbjct: 116 AFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE 172
Query: 379 -LAYTMVMTEKCDVYSFGVVTLEVL 402
L + D++S G + E++
Sbjct: 173 ILLGCKYYSTAVDIWSLGCIFAEMV 197
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 99/203 (48%), Gaps = 20/203 (9%)
Query: 213 IGTGGYGSVYKAQL-PNGKVFALKKLHTSEELAFIKSFKN-EAQVLSQVLHRNIVKL--Y 268
IG G +G VY+A+L +G++ A+KK+ K FKN E Q++ ++ H NIV+L +
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAIKKVLQD------KRFKNRELQIMRKLDHCNIVRLRYF 115
Query: 269 GYCLHKK----CMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHD 324
Y +K + L+ +Y+ H + L + + +LAY+H
Sbjct: 116 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH-- 173
Query: 325 CSPSIIHRDISSNNILLNSKLEAF-VADFGTARLLHADSSNRTLLAGTYGYIAPELAYTM 383
S I HRDI N+LL+ + DFG+A+ L N + + Y Y APEL +
Sbjct: 174 -SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YRAPELIFGA 231
Query: 384 V-MTEKCDVYSFGVVTLEVLMGK 405
T DV+S G V E+L+G+
Sbjct: 232 TDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 96/220 (43%), Gaps = 28/220 (12%)
Query: 213 IGTGGYGSVYKAQL-------PNGKV-FALKKLHTSEELAFIKSFKNEAQVLSQV-LHRN 263
+G G +G V A+ P V A+K L + +E +++ + H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 264 IVKLYGYCLHKKCMFLIYEYMERGSLFCNLH-------------NNEDAVELDWAKRVNI 310
I+ L G C +++I EY +G+L L N ++ + V+
Sbjct: 103 IITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 311 VKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAG 370
+A + YL S IHRD+++ N+L+ +ADFG AR ++ + G
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 371 T--YGYIAPELAYTMVMTEKCDVYSFGVVTLEVL-MGKHP 407
++APE + V T + DV+SFGV+ E+ +G P
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 97/205 (47%), Gaps = 16/205 (7%)
Query: 205 EDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFK-NEAQVLSQVLHR 262
E+F IG G YG VYKA+ G+V AL K+ E + S E +L ++ H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 263 NIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKA----MAHAL 318
NIVKL + ++L++E++ + +L DA L + ++K+ + L
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQ-----DLKKFMDASALT-GIPLPLIKSYLFQLLQGL 116
Query: 319 AYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPE 378
A+ H S ++HRD+ N+L+N++ +ADFG AR T T Y APE
Sbjct: 117 AFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPE 173
Query: 379 -LAYTMVMTEKCDVYSFGVVTLEVL 402
L + D++S G + E++
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMV 198
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 97/205 (47%), Gaps = 16/205 (7%)
Query: 205 EDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFK-NEAQVLSQVLHR 262
E+F IG G YG VYKA+ G+V AL K+ E + S E +L ++ H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 263 NIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKA----MAHAL 318
NIVKL + ++L++E++ + +L DA L + ++K+ + L
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQ-----DLKKFMDASALT-GIPLPLIKSYLFQLLQGL 115
Query: 319 AYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPE 378
A+ H S ++HRD+ N+L+N++ +ADFG AR T T Y APE
Sbjct: 116 AFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPE 172
Query: 379 -LAYTMVMTEKCDVYSFGVVTLEVL 402
L + D++S G + E++
Sbjct: 173 ILLGCKYYSTAVDIWSLGCIFAEMV 197
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 118/294 (40%), Gaps = 38/294 (12%)
Query: 213 IGTGGYGSVYKAQL------PNGKVFALKKL----HTSEELAFIKSFKNEAQVLSQVLHR 262
+G G +G VY+ Q+ P+ A+K L +EL F+ EA ++S+ H+
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM----EALIISKFNHQ 134
Query: 263 NIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNE----DAVELDWAKRVNIVKAMAHAL 318
NIV+ G L F++ E M G L L L +++ + +A
Sbjct: 135 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 194
Query: 319 AYLHHDCSPSIIHRDISSNNILLNSKLEAFVA---DFGTARLLHADSSNRTLLAGTY--G 373
YL + IHRDI++ N LL VA DFG AR ++ R
Sbjct: 195 QYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVK 251
Query: 374 YIAPELAYTMVMTEKCDVYSFGVVTLEVL-MGKHPRDIXXXXXXXXDPKIMLIDVLDQRL 432
++ PE + T K D +SFGV+ E+ +G P + +++ R+
Sbjct: 252 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP------YPSKSNQEVLEFVTSGGRM 305
Query: 433 PPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTPLVKHAAI 486
PP + + I T C Q P+ RP + + + P V + A+
Sbjct: 306 DPP--KNCPGPVYRIMT---QCWQHQPEDRPNFAIILERIEYCTQDPDVINTAL 354
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 118/294 (40%), Gaps = 38/294 (12%)
Query: 213 IGTGGYGSVYKAQL------PNGKVFALKKL----HTSEELAFIKSFKNEAQVLSQVLHR 262
+G G +G VY+ Q+ P+ A+K L +EL F+ EA ++S+ H+
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM----EALIISKFNHQ 111
Query: 263 NIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNE----DAVELDWAKRVNIVKAMAHAL 318
NIV+ G L F++ E M G L L L +++ + +A
Sbjct: 112 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 171
Query: 319 AYLHHDCSPSIIHRDISSNNILLNSKLEAFVA---DFGTARLLHADSSNRTLLAGT--YG 373
YL + IHRDI++ N LL VA DFG AR ++ R
Sbjct: 172 QYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVK 228
Query: 374 YIAPELAYTMVMTEKCDVYSFGVVTLEVL-MGKHPRDIXXXXXXXXDPKIMLIDVLDQRL 432
++ PE + T K D +SFGV+ E+ +G P + +++ R+
Sbjct: 229 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP------YPSKSNQEVLEFVTSGGRM 282
Query: 433 PPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTPLVKHAAI 486
PP + + I T C Q P+ RP + + + P V + A+
Sbjct: 283 DPP--KNCPGPVYRIMT---QCWQHQPEDRPNFAIILERIEYCTQDPDVINTAL 331
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 93/205 (45%), Gaps = 13/205 (6%)
Query: 205 EDFDIRYCIGTGGYGSVYKA--QLPNGKVFA--LKKLHTSEELAFIKSFKNEAQVLSQVL 260
E ++ CIG G +G V++ P A +K + + F EA + Q
Sbjct: 7 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFD 66
Query: 261 HRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAY 320
H +IVKL G + + +++I E G L L + LD A + ++ ALAY
Sbjct: 67 HPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRK--YSLDLASLILYAYQLSTALAY 123
Query: 321 LHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTY--GYIAPE 378
L S +HRDI++ N+L++S + DFG +R + DS+ G ++APE
Sbjct: 124 LE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPE 179
Query: 379 LAYTMVMTEKCDVYSFGVVTLEVLM 403
T DV+ FGV E+LM
Sbjct: 180 SINFRRFTSASDVWMFGVCMWEILM 204
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 93/205 (45%), Gaps = 13/205 (6%)
Query: 205 EDFDIRYCIGTGGYGSVYKA--QLPNGKVFA--LKKLHTSEELAFIKSFKNEAQVLSQVL 260
E ++ CIG G +G V++ P A +K + + F EA + Q
Sbjct: 13 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFD 72
Query: 261 HRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAY 320
H +IVKL G + + +++I E G L L + LD A + ++ ALAY
Sbjct: 73 HPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRK--YSLDLASLILYAYQLSTALAY 129
Query: 321 LHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTY--GYIAPE 378
L S +HRDI++ N+L++S + DFG +R + DS+ G ++APE
Sbjct: 130 LE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPE 185
Query: 379 LAYTMVMTEKCDVYSFGVVTLEVLM 403
T DV+ FGV E+LM
Sbjct: 186 SINFRRFTSASDVWMFGVCMWEILM 210
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 98/207 (47%), Gaps = 16/207 (7%)
Query: 203 ATEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFK-NEAQVLSQVL 260
+ E+F IG G YG VYKA+ G+V ALKK+ E + S E +L ++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 261 HRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKA----MAH 316
H NIVKL + ++L++E++ + +L DA L + ++K+ +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQ-----DLKKFMDASALT-GIPLPLIKSYLFQLLQ 114
Query: 317 ALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIA 376
LA+ H S ++HRD+ N+L+N++ +ADFG AR T Y A
Sbjct: 115 GLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 171
Query: 377 PE-LAYTMVMTEKCDVYSFGVVTLEVL 402
PE L + D++S G + E++
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMV 198
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 93/205 (45%), Gaps = 13/205 (6%)
Query: 205 EDFDIRYCIGTGGYGSVYKA--QLPNGKVFA--LKKLHTSEELAFIKSFKNEAQVLSQVL 260
E ++ CIG G +G V++ P A +K + + F EA + Q
Sbjct: 15 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFD 74
Query: 261 HRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAY 320
H +IVKL G + + +++I E G L L + LD A + ++ ALAY
Sbjct: 75 HPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRK--YSLDLASLILYAYQLSTALAY 131
Query: 321 LHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTY--GYIAPE 378
L S +HRDI++ N+L++S + DFG +R + DS+ G ++APE
Sbjct: 132 LE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPE 187
Query: 379 LAYTMVMTEKCDVYSFGVVTLEVLM 403
T DV+ FGV E+LM
Sbjct: 188 SINFRRFTSASDVWMFGVCMWEILM 212
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 124/290 (42%), Gaps = 55/290 (18%)
Query: 213 IGTGGYGSVYKA-QLPNGKVFALKK-LHTSEELAFIKSFK---NEAQVLSQVLHRNIVKL 267
+G+G +G+V+K +P G+ + + E+ + +SF+ + + + H +IV+L
Sbjct: 39 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRL 98
Query: 268 YGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVE----LDWAKRVNIVKAMAHALAYLHH 323
G C + L+ +Y+ GSL ++ + A+ L+W V I K M YL
Sbjct: 99 LGLC-PGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWG--VQIAKGMY----YLEE 151
Query: 324 DCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGT----YGYIAPEL 379
++HR++++ N+LL S + VADFG A LL D ++ LL ++A E
Sbjct: 152 H---GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPD--DKQLLYSEAKTPIKWMALES 206
Query: 380 AYTMVMTEKCDVYSFGVVTLEVL-MGKHPR---------DIXXXXXXXXDPKIMLIDVLD 429
+ T + DV+S+GV E++ G P D+ P+I IDV
Sbjct: 207 IHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGERLAQPQICTIDVY- 265
Query: 430 QRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTP 479
V C + RPT + ++ EF + P
Sbjct: 266 -------------------MVMVKCWMIDENIRPTFKELANEFTRMARDP 296
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 93/205 (45%), Gaps = 13/205 (6%)
Query: 205 EDFDIRYCIGTGGYGSVYKA--QLPNGKVFA--LKKLHTSEELAFIKSFKNEAQVLSQVL 260
E ++ CIG G +G V++ P A +K + + F EA + Q
Sbjct: 12 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFD 71
Query: 261 HRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAY 320
H +IVKL G + + +++I E G L L + LD A + ++ ALAY
Sbjct: 72 HPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRK--YSLDLASLILYAYQLSTALAY 128
Query: 321 LHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTY--GYIAPE 378
L S +HRDI++ N+L++S + DFG +R + DS+ G ++APE
Sbjct: 129 LE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPE 184
Query: 379 LAYTMVMTEKCDVYSFGVVTLEVLM 403
T DV+ FGV E+LM
Sbjct: 185 SINFRRFTSASDVWMFGVCMWEILM 209
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 97/205 (47%), Gaps = 16/205 (7%)
Query: 205 EDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFK-NEAQVLSQVLHR 262
E+F IG G YG VYKA+ G+V ALKK+ E + S E +L ++ H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 263 NIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKA----MAHAL 318
NIVKL + ++L++E++ + +L DA L + ++K+ + L
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFLHQ-----DLKKFMDASALT-GIPLPLIKSYLFQLLQGL 117
Query: 319 AYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPE 378
A+ H S ++HRD+ N+L+N++ +ADFG AR T Y APE
Sbjct: 118 AFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE 174
Query: 379 -LAYTMVMTEKCDVYSFGVVTLEVL 402
L + D++S G + E++
Sbjct: 175 ILLGCKYYSTAVDIWSLGCIFAEMV 199
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 98/214 (45%), Gaps = 18/214 (8%)
Query: 205 EDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKL-----HTSEELAFIKSFKNEAQVLSQ 258
+DFD+ IG G Y V +L +++A++ + + E++ ++++ E V Q
Sbjct: 52 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQT---EKHVFEQ 108
Query: 259 VL-HRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKA-MAH 316
H +V L+ + +F + EY+ G L ++ E + A ++
Sbjct: 109 ASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPE----EHARFYSAEISL 164
Query: 317 ALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIA 376
AL YLH II+RD+ +N+LL+S+ + D+G + + GT YIA
Sbjct: 165 ALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIA 221
Query: 377 PELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDI 410
PE+ D ++ GV+ E++ G+ P DI
Sbjct: 222 PEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI 255
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 98/207 (47%), Gaps = 16/207 (7%)
Query: 203 ATEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFK-NEAQVLSQVL 260
+ E+F IG G YG VYKA+ G+V ALKK+ E + S E +L ++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 261 HRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKA----MAH 316
H NIVKL + ++L++E++ + +L DA L + ++K+ +
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQ-----DLKKFMDASALT-GIPLPLIKSYLFQLLQ 115
Query: 317 ALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIA 376
LA+ H S ++HRD+ N+L+N++ +ADFG AR T Y A
Sbjct: 116 GLAFCH---SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 172
Query: 377 PE-LAYTMVMTEKCDVYSFGVVTLEVL 402
PE L + D++S G + E++
Sbjct: 173 PEILLGCKYYSTAVDIWSLGCIFAEMV 199
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 96/220 (43%), Gaps = 28/220 (12%)
Query: 213 IGTGGYGSVYKAQL-------PNGKV-FALKKLHTSEELAFIKSFKNEAQVLSQV-LHRN 263
+G G +G V A+ P V A+K L + +E +++ + H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 264 IVKLYGYCLHKKCMFLIYEYMERGSLFCNLH-------------NNEDAVELDWAKRVNI 310
I+ L G C +++I EY +G+L L N ++ + V+
Sbjct: 103 IIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 311 VKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAG 370
+A + YL S IHRD+++ N+L+ +ADFG AR ++ + G
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 371 T--YGYIAPELAYTMVMTEKCDVYSFGVVTLEVL-MGKHP 407
++APE + V T + DV+SFGV+ E+ +G P
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 101/215 (46%), Gaps = 40/215 (18%)
Query: 213 IGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVL--HRNIV----- 265
IG G +G V++ + G+ A+K + EE +S+ EA++ V+ H NI+
Sbjct: 50 IGKGRFGEVWRGKW-RGEEVAVKIFSSREE----RSWFREAEIYQTVMLRHENILGFIAA 104
Query: 266 --KLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHH 323
K G ++L+ +Y E GSLF L+ VE + + + A LA+LH
Sbjct: 105 DNKDNGTWTQ---LWLVSDYHEHGSLFDYLNRYTVTVE----GMIKLALSTASGLAHLHM 157
Query: 324 DC-----SPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTL------LAGTY 372
+ P+I HRD+ S NIL+ +AD G A + DS+ T+ GT
Sbjct: 158 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGTK 215
Query: 373 GYIAPEL---AYTMVMTE---KCDVYSFGVVTLEV 401
Y+APE+ + M E + D+Y+ G+V E+
Sbjct: 216 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 97/207 (46%), Gaps = 16/207 (7%)
Query: 203 ATEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFK-NEAQVLSQVL 260
+ E+F IG G YG VYKA+ G+V ALKK+ E + S E +L ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 261 HRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKA----MAH 316
H NIVKL + ++L++E++ +L DA L + ++K+ +
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLS-----MDLKKFMDASALT-GIPLPLIKSYLFQLLQ 117
Query: 317 ALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIA 376
LA+ H S ++HRD+ N+L+N++ +ADFG AR T Y A
Sbjct: 118 GLAFCH---SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 174
Query: 377 PE-LAYTMVMTEKCDVYSFGVVTLEVL 402
PE L + D++S G + E++
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMV 201
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 99/203 (48%), Gaps = 20/203 (9%)
Query: 213 IGTGGYGSVYKAQL-PNGKVFALKKLHTSEELAFIKSFKN-EAQVLSQVLHRNIVKL--Y 268
IG G +G VY+A+L +G++ A+KK+ K FKN E Q++ ++ H NIV+L +
Sbjct: 107 IGNGSFGVVYQAKLCDSGELVAIKKVLQD------KRFKNRELQIMRKLDHCNIVRLRYF 160
Query: 269 GYCLHKK----CMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHD 324
Y +K + L+ +Y+ H + L + + +LAY+H
Sbjct: 161 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH-- 218
Query: 325 CSPSIIHRDISSNNILLNSKLEAF-VADFGTARLLHADSSNRTLLAGTYGYIAPELAYTM 383
S I HRDI N+LL+ + DFG+A+ L N + + Y Y APEL +
Sbjct: 219 -SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YRAPELIFGA 276
Query: 384 V-MTEKCDVYSFGVVTLEVLMGK 405
T DV+S G V E+L+G+
Sbjct: 277 TDYTSSIDVWSAGCVLAELLLGQ 299
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 96/220 (43%), Gaps = 28/220 (12%)
Query: 213 IGTGGYGSVYKAQL-------PNGKV-FALKKLHTSEELAFIKSFKNEAQVLSQV-LHRN 263
+G G +G V A+ P V A+K L + +E +++ + H+N
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 148
Query: 264 IVKLYGYCLHKKCMFLIYEYMERGSLFCNLH-------------NNEDAVELDWAKRVNI 310
I+ L G C +++I EY +G+L L N ++ + V+
Sbjct: 149 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 208
Query: 311 VKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAG 370
+A + YL S IHRD+++ N+L+ +ADFG AR ++ + G
Sbjct: 209 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 265
Query: 371 T--YGYIAPELAYTMVMTEKCDVYSFGVVTLEVL-MGKHP 407
++APE + V T + DV+SFGV+ E+ +G P
Sbjct: 266 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 305
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 97/206 (47%), Gaps = 27/206 (13%)
Query: 213 IGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKN-EAQVLSQVLHRNIVKLYGYC 271
IG G +G V++A+L A+KK+ K FKN E Q++ V H N+V L +
Sbjct: 48 IGNGSFGVVFQAKLVESDEVAIKKVLQD------KRFKNRELQIMRIVKHPNVVDLKAFF 101
Query: 272 L----HKKCMF--LIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVK----AMAHALAYL 321
K +F L+ EY+ + H +L + ++K + +LAY+
Sbjct: 102 YSNGDKKDEVFLNLVLEYVPETVYRASRH----YAKLKQTMPMLLIKLYMYQLLRSLAYI 157
Query: 322 HHDCSPSIIHRDISSNNILLNSKLEAF-VADFGTARLLHADSSNRTLLAGTYGYIAPELA 380
H S I HRDI N+LL+ + DFG+A++L A N + + Y Y APEL
Sbjct: 158 H---SIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXICSRY-YRAPELI 213
Query: 381 YTMV-MTEKCDVYSFGVVTLEVLMGK 405
+ T D++S G V E++ G+
Sbjct: 214 FGATNYTTNIDIWSTGCVMAELMQGQ 239
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 100/202 (49%), Gaps = 13/202 (6%)
Query: 213 IGTGGYGSVYKA--QLPNGKV-FALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYG 269
+G G +GSV + ++ ++ A+K L E A + EAQ++ Q+ + IV+L G
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 403
Query: 270 YCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSI 329
C + + L+ E G L L + + + + ++ ++ + YL +
Sbjct: 404 VC-QAEALMLVMEMAGGGPLHKFLVGKREEIPV--SNVAELLHQVSMGMKYLEEK---NF 457
Query: 330 IHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLL-AGTY--GYIAPELAYTMVMT 386
+HR++++ N+LL ++ A ++DFG ++ L AD S T AG + + APE +
Sbjct: 458 VHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFS 517
Query: 387 EKCDVYSFGVVTLEVL-MGKHP 407
+ DV+S+GV E L G+ P
Sbjct: 518 SRSDVWSYGVTMWEALSYGQKP 539
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 119/294 (40%), Gaps = 38/294 (12%)
Query: 213 IGTGGYGSVYKAQL------PNGKVFALKKL----HTSEELAFIKSFKNEAQVLSQVLHR 262
+G G +G VY+ Q+ P+ A+K L +EL F+ EA ++S+ H+
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM----EALIISKFNHQ 94
Query: 263 NIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNE----DAVELDWAKRVNIVKAMAHAL 318
NIV+ G L F++ E M G L L L +++ + +A
Sbjct: 95 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 154
Query: 319 AYLHHDCSPSIIHRDISSNNILLNSKLEAFVA---DFGTARLLHADSSNRTLLAGT--YG 373
YL + IHRDI++ N LL VA DFG A+ ++ S R
Sbjct: 155 QYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVK 211
Query: 374 YIAPELAYTMVMTEKCDVYSFGVVTLEVL-MGKHPRDIXXXXXXXXDPKIMLIDVLDQRL 432
++ PE + T K D +SFGV+ E+ +G P + +++ R+
Sbjct: 212 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP------YPSKSNQEVLEFVTSGGRM 265
Query: 433 PPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTPLVKHAAI 486
PP + + I T C Q P+ RP + + + P V + A+
Sbjct: 266 DPP--KNCPGPVYRIMT---QCWQHQPEDRPNFAIILERIEYCTQDPDVINTAL 314
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 100/229 (43%), Gaps = 29/229 (12%)
Query: 194 RIVYEDLIEATEDFDIRYCIGTGGYGSVYKA-QLPNGKVFALKKLHTSEELAFIKSFKNE 252
RIVY + DF ++ +G G YG V A P G++ A+KK+ ++ F E
Sbjct: 4 RIVYN----ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLRE 59
Query: 253 AQVLSQVLHRNIVKLYGYCLHKKC-----MFLIYEYMERGSLFCNLHNNEDAVELDWAKR 307
++L H NI+ ++ +++I E M+ +LH L
Sbjct: 60 IKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQ-----TDLHRVISTQMLSDDHI 114
Query: 308 VNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLH---ADSSN 364
+ A+ LH ++IHRD+ +N+L+NS + V DFG AR++ AD+S
Sbjct: 115 QYFIYQTLRAVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSE 171
Query: 365 RT-------LLAGTYGYIAPELAYTMVMTEKC-DVYSFGVVTLEVLMGK 405
T T Y APE+ T + DV+S G + E+ + +
Sbjct: 172 PTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 95/206 (46%), Gaps = 15/206 (7%)
Query: 205 EDFDIRYCIGTGGYGSVYKA-----QLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQV 259
E ++ CIG G +G V++ + P V A+K + + F EA + Q
Sbjct: 10 ERIELGRCIGEGQFGDVHQGIYMSPENPAMAV-AIKTCKNCTSDSVREKFLQEALTMRQF 68
Query: 260 LHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALA 319
H +IVKL G + + +++I E G L L + LD A + ++ ALA
Sbjct: 69 DHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRK--FSLDLASLILYAYQLSTALA 125
Query: 320 YLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTY--GYIAP 377
YL S +HRDI++ N+L+++ + DFG +R + DS+ G ++AP
Sbjct: 126 YLE---SKRFVHRDIAARNVLVSATDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAP 181
Query: 378 ELAYTMVMTEKCDVYSFGVVTLEVLM 403
E T DV+ FGV E+LM
Sbjct: 182 ESINFRRFTSASDVWMFGVCMWEILM 207
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 126/289 (43%), Gaps = 53/289 (18%)
Query: 206 DFDIRYCIGTGGYGSVYKAQLPNGKV----FALKKLH-TSEELAFIKSFKNEAQVLSQVL 260
DF+ C+G GG+G V++A+ KV +A+K++ + ELA K + E + L+++
Sbjct: 6 DFEPIQCLGRGGFGVVFEAK---NKVDDCNYAIKRIRLPNRELAREKVMR-EVKALAKLE 61
Query: 261 HRNIVKLYGYCLHKKCMFL-------IYEYMERGSLFCNLHNNEDAV-------ELDWAK 306
H IV+ + L K +Y Y++ C N +D + E + +
Sbjct: 62 HPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQ--LCRKENLKDWMNGRCTIEERERSV 119
Query: 307 RVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRT 366
++I +A A+ +LH S ++HRD+ +NI V DFG + D +T
Sbjct: 120 CLHIFLQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQT 176
Query: 367 LLA------------GTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDIXXXX 414
+L GT Y++PE + + K D++S G++ E+L +P
Sbjct: 177 VLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL---YPFSTQMER 233
Query: 415 XXXXDPKIMLIDVLDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRP 463
L DV + + PP +K + +++ + L +P RP
Sbjct: 234 VRT------LTDVRNLKFPPLFTQKYPCEYVMVQDM----LSPSPMERP 272
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 97/207 (46%), Gaps = 16/207 (7%)
Query: 203 ATEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFK-NEAQVLSQVL 260
+ E+F IG G YG VYKA+ G+V ALKK+ E + S E +L ++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 261 HRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKA----MAH 316
H NIVKL + ++L++E++ +L DA L + ++K+ +
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLS-----MDLKKFMDASALT-GIPLPLIKSYLFQLLQ 115
Query: 317 ALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIA 376
LA+ H S ++HRD+ N+L+N++ +ADFG AR T Y A
Sbjct: 116 GLAFCH---SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 172
Query: 377 PE-LAYTMVMTEKCDVYSFGVVTLEVL 402
PE L + D++S G + E++
Sbjct: 173 PEILLGCKYYSTAVDIWSLGCIFAEMV 199
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 100/229 (43%), Gaps = 29/229 (12%)
Query: 194 RIVYEDLIEATEDFDIRYCIGTGGYGSVYKA-QLPNGKVFALKKLHTSEELAFIKSFKNE 252
RIVY + DF ++ +G G YG V A P G++ A+KK+ ++ F E
Sbjct: 4 RIVYN----ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLRE 59
Query: 253 AQVLSQVLHRNIVKLYGYCLHKKC-----MFLIYEYMERGSLFCNLHNNEDAVELDWAKR 307
++L H NI+ ++ +++I E M+ +LH L
Sbjct: 60 IKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQ-----TDLHRVISTQMLSDDHI 114
Query: 308 VNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTL 367
+ A+ LH ++IHRD+ +N+L+NS + V DFG AR++ +++ +
Sbjct: 115 QYFIYQTLRAVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSE 171
Query: 368 LAG----------TYGYIAPELAYTMVMTEKC-DVYSFGVVTLEVLMGK 405
G T Y APE+ T + DV+S G + E+ + +
Sbjct: 172 PTGQQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 124/290 (42%), Gaps = 55/290 (18%)
Query: 213 IGTGGYGSVYKA-QLPNGKVFALKK-LHTSEELAFIKSFK---NEAQVLSQVLHRNIVKL 267
+G+G +G+V+K +P G+ + + E+ + +SF+ + + + H +IV+L
Sbjct: 21 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRL 80
Query: 268 YGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVE----LDWAKRVNIVKAMAHALAYLHH 323
G C + L+ +Y+ GSL ++ + A+ L+W V I K M YL
Sbjct: 81 LGLC-PGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWG--VQIAKGMY----YLEE 133
Query: 324 DCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGT----YGYIAPEL 379
++HR++++ N+LL S + VADFG A LL D ++ LL ++A E
Sbjct: 134 H---GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPD--DKQLLYSEAKTPIKWMALES 188
Query: 380 AYTMVMTEKCDVYSFGVVTLEVL-MGKHPR---------DIXXXXXXXXDPKIMLIDVLD 429
+ T + DV+S+GV E++ G P D+ P+I IDV
Sbjct: 189 IHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGERLAQPQICTIDVY- 247
Query: 430 QRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTP 479
V C + RPT + ++ EF + P
Sbjct: 248 -------------------MVMVKCWMIDENIRPTFKELANEFTRMARDP 278
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 97/229 (42%), Gaps = 29/229 (12%)
Query: 194 RIVYEDLIEATEDFDIRYCIGTGGYGSVYKA-QLPNGKVFALKKLHTSEELAFIKSFKNE 252
RIVY + DF ++ +G G YG V A P G++ A+KK+ ++ F E
Sbjct: 4 RIVYN----ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLRE 59
Query: 253 AQVLSQVLHRNIVKLYGYCLHKKC-----MFLIYEYMERGSLFCNLHNNEDAVELDWAKR 307
++L H NI+ ++ +++I E M+ +LH L
Sbjct: 60 IKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQ-----TDLHRVISTQMLSDDHI 114
Query: 308 VNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLH-------- 359
+ A+ LH ++IHRD+ +N+L+NS + V DFG AR++
Sbjct: 115 QYFIYQTLRAVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSE 171
Query: 360 --ADSSNRTLLAGTYGYIAPELAYTMVMTEKC-DVYSFGVVTLEVLMGK 405
S T T Y APE+ T + DV+S G + E+ + +
Sbjct: 172 PTGQQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 125/288 (43%), Gaps = 48/288 (16%)
Query: 213 IGTGGYGSVYKAQLP-----NGKVFALKKL-HTSEELAFIKSFKNEAQVLSQVLHRNIVK 266
+G G +GSV + G + A+K+L H+ + + F+ E Q+L + IVK
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQ--RDFQREIQILKALHSDFIVK 75
Query: 267 LYG--YCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHD 324
G Y ++ + L+ EY+ G L L + LD ++ + + + YL
Sbjct: 76 YRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHR--ARLDASRLLLYSSQICKGMEYLG-- 131
Query: 325 CSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSN---RTLLAGTYGYIAPELAY 381
S +HRD+++ NIL+ S+ +ADFG A+LL D R + APE
Sbjct: 132 -SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLS 190
Query: 382 TMVMTEKCDVYSFGVVTLEV----------------LMGKHPRDIXXXXXXXXDPKIMLI 425
+ + + DV+SFGVV E+ +MG RD+ +++ +
Sbjct: 191 DNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGSE-RDVPALS------RLLEL 243
Query: 426 DVLDQRLP-PPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEF 472
QRLP PP + +++ + C +P+ RP+ ++ +
Sbjct: 244 LEEGQRLPAPPACPAEVHELMKL------CWAPSPQDRPSFSALGPQL 285
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 128/288 (44%), Gaps = 50/288 (17%)
Query: 213 IGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVL--HRNIV----- 265
IG G +G V++ + G+ A+K + EE +S+ EA++ V+ H NI+
Sbjct: 11 IGKGRFGEVWRGKW-RGEEVAVKIFSSREE----RSWFREAEIYQTVMLRHENILGFIAA 65
Query: 266 --KLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHH 323
K G ++L+ +Y E GSLF L+ VE + + + A LA+LH
Sbjct: 66 DNKDNGTWTQ---LWLVSDYHEHGSLFDYLNRYTVTVE----GMIKLALSTASGLAHLHM 118
Query: 324 DC-----SPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTL------LAGTY 372
+ P+I HRD+ S NIL+ +AD G A + DS+ T+ GT
Sbjct: 119 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGTK 176
Query: 373 GYIAPEL---AYTMVMTE---KCDVYSFGVVTLEV-----LMGKHPR-DIXXXXXXXXDP 420
Y+APE+ + M E + D+Y+ G+V E+ + G H + DP
Sbjct: 177 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDP 236
Query: 421 KI--MLIDVLDQRLPP--PVDRKVIRDILLISTVSFACLQSNPKSRPT 464
+ M V +Q+L P P + + +++ + C +N +R T
Sbjct: 237 SVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLT 284
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 101/215 (46%), Gaps = 40/215 (18%)
Query: 213 IGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVL--HRNIV----- 265
IG G +G V++ + G+ A+K + EE +S+ EA++ V+ H NI+
Sbjct: 37 IGKGRFGEVWRGKW-RGEEVAVKIFSSREE----RSWFREAEIYQTVMLRHENILGFIAA 91
Query: 266 --KLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHH 323
K G ++L+ +Y E GSLF L+ VE + + + A LA+LH
Sbjct: 92 DNKDNGTWTQ---LWLVSDYHEHGSLFDYLNRYTVTVE----GMIKLALSTASGLAHLHM 144
Query: 324 DC-----SPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTL------LAGTY 372
+ P+I HRD+ S NIL+ +AD G A + DS+ T+ GT
Sbjct: 145 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGTK 202
Query: 373 GYIAPEL---AYTMVMTE---KCDVYSFGVVTLEV 401
Y+APE+ + M E + D+Y+ G+V E+
Sbjct: 203 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 99/216 (45%), Gaps = 22/216 (10%)
Query: 203 ATEDFDIRYCIGTGGYGSVYKAQLPN-GKVFALK--KLHTSEELAFIKSFKNEA--QVLS 257
AT ++ IG G YG+VYKA+ P+ G ALK ++ EE I + + A + L
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 258 QVLHRNIVKLYGYCLHKKC-----MFLIYEYMERGSLFCNLHNNEDAVE---LDWAKRVN 309
H N+V+L C + + L++E++++ +L D L +
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-----DLRTYLDKAPPPGLPAETIKD 116
Query: 310 IVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLA 369
+++ L +LH +C I+HRD+ NIL+ S +ADFG AR+ + ++
Sbjct: 117 LMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAPVVV 173
Query: 370 GTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGK 405
T Y APE+ D++S G + E+ K
Sbjct: 174 -TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 128/288 (44%), Gaps = 50/288 (17%)
Query: 213 IGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVL--HRNIV----- 265
IG G +G V++ + G+ A+K + EE +S+ EA++ V+ H NI+
Sbjct: 14 IGKGRFGEVWRGKW-RGEEVAVKIFSSREE----RSWFREAEIYQTVMLRHENILGFIAA 68
Query: 266 --KLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHH 323
K G ++L+ +Y E GSLF L+ VE + + + A LA+LH
Sbjct: 69 DNKDNGTWTQ---LWLVSDYHEHGSLFDYLNRYTVTVE----GMIKLALSTASGLAHLHM 121
Query: 324 DC-----SPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTL------LAGTY 372
+ P+I HRD+ S NIL+ +AD G A + DS+ T+ GT
Sbjct: 122 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGTK 179
Query: 373 GYIAPEL---AYTMVMTE---KCDVYSFGVVTLEV-----LMGKHPR-DIXXXXXXXXDP 420
Y+APE+ + M E + D+Y+ G+V E+ + G H + DP
Sbjct: 180 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDP 239
Query: 421 KI--MLIDVLDQRLPP--PVDRKVIRDILLISTVSFACLQSNPKSRPT 464
+ M V +Q+L P P + + +++ + C +N +R T
Sbjct: 240 SVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLT 287
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 99/215 (46%), Gaps = 22/215 (10%)
Query: 203 ATEDFDIRY-------CIGTGGYGSVYKA-----QLPNGKVFALKKLHTSEELAFIKSFK 250
+T D++I+ CIG G +G V++ + P V A+K + + F
Sbjct: 381 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAV-AIKTCKNCTSDSVREKFL 439
Query: 251 NEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNI 310
EA + Q H +IVKL G + + +++I E G L L + LD A +
Sbjct: 440 QEALTMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRK--FSLDLASLILY 496
Query: 311 VKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAG 370
++ ALAYL S +HRDI++ N+L+++ + DFG +R + DS+ G
Sbjct: 497 AYQLSTALAYLE---SKRFVHRDIAARNVLVSATDCVKLGDFGLSRYME-DSTYYKASKG 552
Query: 371 TY--GYIAPELAYTMVMTEKCDVYSFGVVTLEVLM 403
++APE T DV+ FGV E+LM
Sbjct: 553 KLPIKWMAPESINFRRFTSASDVWMFGVCMWEILM 587
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 98/214 (45%), Gaps = 17/214 (7%)
Query: 201 IEATEDFDIRYCIGTGGYGSVYKA-QLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQV 259
+ ++ F +G G Y +VYK G ALK++ E + E ++ ++
Sbjct: 1 MSSSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKEL 60
Query: 260 LHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKR---VNIVK---- 312
H NIV+LY + + L++E+M+ +L D+ + R +N+VK
Sbjct: 61 KHENIVRLYDVIHTENKLTLVFEFMDN-----DLKKYMDSRTVGNTPRGLELNLVKYFQW 115
Query: 313 AMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTY 372
+ LA+ H + I+HRD+ N+L+N + + + DFG AR + + T
Sbjct: 116 QLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTL 172
Query: 373 GYIAPE-LAYTMVMTEKCDVYSFGVVTLEVLMGK 405
Y AP+ L + + D++S G + E++ GK
Sbjct: 173 WYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGK 206
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 128/288 (44%), Gaps = 50/288 (17%)
Query: 213 IGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVL--HRNIV----- 265
IG G +G V++ + G+ A+K + EE +S+ EA++ V+ H NI+
Sbjct: 17 IGKGRFGEVWRGKW-RGEEVAVKIFSSREE----RSWFREAEIYQTVMLRHENILGFIAA 71
Query: 266 --KLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHH 323
K G ++L+ +Y E GSLF L+ VE + + + A LA+LH
Sbjct: 72 DNKDNGTWTQ---LWLVSDYHEHGSLFDYLNRYTVTVE----GMIKLALSTASGLAHLHM 124
Query: 324 DC-----SPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTL------LAGTY 372
+ P+I HRD+ S NIL+ +AD G A + DS+ T+ GT
Sbjct: 125 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGTK 182
Query: 373 GYIAPEL---AYTMVMTE---KCDVYSFGVVTLEV-----LMGKHPR-DIXXXXXXXXDP 420
Y+APE+ + M E + D+Y+ G+V E+ + G H + DP
Sbjct: 183 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDP 242
Query: 421 KI--MLIDVLDQRLPP--PVDRKVIRDILLISTVSFACLQSNPKSRPT 464
+ M V +Q+L P P + + +++ + C +N +R T
Sbjct: 243 SVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLT 290
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 96/220 (43%), Gaps = 28/220 (12%)
Query: 213 IGTGGYGSVYKAQL-------PNGKV-FALKKLHTSEELAFIKSFKNEAQVLSQV-LHRN 263
+G G +G V A+ P V A+K L + +E +++ + H+N
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 91
Query: 264 IVKLYGYCLHKKCMFLIYEYMERGSLFCNLH-------------NNEDAVELDWAKRVNI 310
I+ L G C +++I EY +G+L L N ++ + V+
Sbjct: 92 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 151
Query: 311 VKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAG 370
+A + YL S IHRD+++ N+L+ +ADFG AR ++ + G
Sbjct: 152 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 208
Query: 371 T--YGYIAPELAYTMVMTEKCDVYSFGVVTLEVL-MGKHP 407
++APE + V T + DV+SFGV+ E+ +G P
Sbjct: 209 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 248
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 99/216 (45%), Gaps = 22/216 (10%)
Query: 203 ATEDFDIRYCIGTGGYGSVYKAQLPN-GKVFALK--KLHTSEELAFIKSFKNEA--QVLS 257
AT ++ IG G YG+VYKA+ P+ G ALK ++ EE I + + A + L
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 258 QVLHRNIVKLYGYCLHKKC-----MFLIYEYMERGSLFCNLHNNEDAVE---LDWAKRVN 309
H N+V+L C + + L++E++++ +L D L +
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-----DLRTYLDKAPPPGLPAETIKD 116
Query: 310 IVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLA 369
+++ L +LH +C I+HRD+ NIL+ S +ADFG AR+ + ++
Sbjct: 117 LMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALDPVVV 173
Query: 370 GTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGK 405
T Y APE+ D++S G + E+ K
Sbjct: 174 -TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 96/220 (43%), Gaps = 28/220 (12%)
Query: 213 IGTGGYGSVYKAQL-------PNGKV-FALKKLHTSEELAFIKSFKNEAQVLSQV-LHRN 263
+G G +G V A+ P V A+K L + +E +++ + H+N
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 89
Query: 264 IVKLYGYCLHKKCMFLIYEYMERGSLFCNLH-------------NNEDAVELDWAKRVNI 310
I+ L G C +++I EY +G+L L N ++ + V+
Sbjct: 90 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 149
Query: 311 VKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAG 370
+A + YL S IHRD+++ N+L+ +ADFG AR ++ + G
Sbjct: 150 TYQLARGMEYL---ASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 206
Query: 371 T--YGYIAPELAYTMVMTEKCDVYSFGVVTLEVL-MGKHP 407
++APE + V T + DV+SFGV+ E+ +G P
Sbjct: 207 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 246
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 128/288 (44%), Gaps = 50/288 (17%)
Query: 213 IGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVL--HRNIV----- 265
IG G +G V++ + G+ A+K + EE +S+ EA++ V+ H NI+
Sbjct: 12 IGKGRFGEVWRGKW-RGEEVAVKIFSSREE----RSWFREAEIYQTVMLRHENILGFIAA 66
Query: 266 --KLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHH 323
K G ++L+ +Y E GSLF L+ VE + + + A LA+LH
Sbjct: 67 DNKDNGTWTQ---LWLVSDYHEHGSLFDYLNRYTVTVE----GMIKLALSTASGLAHLHM 119
Query: 324 DC-----SPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTL------LAGTY 372
+ P+I HRD+ S NIL+ +AD G A + DS+ T+ GT
Sbjct: 120 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGTK 177
Query: 373 GYIAPEL---AYTMVMTE---KCDVYSFGVVTLEV-----LMGKHPR-DIXXXXXXXXDP 420
Y+APE+ + M E + D+Y+ G+V E+ + G H + DP
Sbjct: 178 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDP 237
Query: 421 KI--MLIDVLDQRLPP--PVDRKVIRDILLISTVSFACLQSNPKSRPT 464
+ M V +Q+L P P + + +++ + C +N +R T
Sbjct: 238 SVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLT 285
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 96/220 (43%), Gaps = 28/220 (12%)
Query: 213 IGTGGYGSVYKAQL-------PNGKV-FALKKLHTSEELAFIKSFKNEAQVLSQV-LHRN 263
+G G +G V A+ P V A+K L + +E +++ + H+N
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 94
Query: 264 IVKLYGYCLHKKCMFLIYEYMERGSLFCNLH-------------NNEDAVELDWAKRVNI 310
I+ L G C +++I EY +G+L L N ++ + V+
Sbjct: 95 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 154
Query: 311 VKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAG 370
+A + YL S IHRD+++ N+L+ +ADFG AR ++ + G
Sbjct: 155 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 211
Query: 371 T--YGYIAPELAYTMVMTEKCDVYSFGVVTLEVL-MGKHP 407
++APE + V T + DV+SFGV+ E+ +G P
Sbjct: 212 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 251
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 92/211 (43%), Gaps = 14/211 (6%)
Query: 207 FDIRYCIGTGGYGSVYKA-QLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIV 265
++++ +GTGG+G V + G+ A+K+ + + E Q++ ++ H N+V
Sbjct: 16 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 75
Query: 266 KLYGY--CLHK----KCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALA 319
L K L EY E G L L+ E+ L ++ ++ AL
Sbjct: 76 SAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALR 135
Query: 320 YLHHDCSPSIIHRDISSNNILLN---SKLEAFVADFGTARLLHADSSNRTLLAGTYGYIA 376
YLH + IIHRD+ NI+L +L + D G A+ L T GT Y+A
Sbjct: 136 YLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELC-TEFVGTLQYLA 191
Query: 377 PELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
PEL T D +SFG + E + G P
Sbjct: 192 PELLEQKKYTVTVDYWSFGTLAFECITGFRP 222
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 91/202 (45%), Gaps = 8/202 (3%)
Query: 210 RYCIGTGGYGSVYKAQ-LPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLY 268
R +G G YG VY + L N A+K++ + + + E + + H+NIV+
Sbjct: 13 RVVLGKGTYGIVYAGRDLSNQVRIAIKEI-PERDSRYSQPLHEEIALHKHLKHKNIVQYL 71
Query: 269 GYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPS 328
G + + E + GSL L + ++ + K + L YLH +
Sbjct: 72 GSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---Q 128
Query: 329 IIHRDISSNNILLNSKLEAF-VADFGTARLLHADSSNRTLLAGTYGYIAPEL--AYTMVM 385
I+HRDI +N+L+N+ ++DFGT++ L + GT Y+APE+
Sbjct: 129 IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGY 188
Query: 386 TEKCDVYSFGVVTLEVLMGKHP 407
+ D++S G +E+ GK P
Sbjct: 189 GKAADIWSLGCTIIEMATGKPP 210
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 92/211 (43%), Gaps = 14/211 (6%)
Query: 207 FDIRYCIGTGGYGSVYKA-QLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIV 265
++++ +GTGG+G V + G+ A+K+ + + E Q++ ++ H N+V
Sbjct: 17 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 76
Query: 266 KLYGY--CLHK----KCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALA 319
L K L EY E G L L+ E+ L ++ ++ AL
Sbjct: 77 SAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALR 136
Query: 320 YLHHDCSPSIIHRDISSNNILLN---SKLEAFVADFGTARLLHADSSNRTLLAGTYGYIA 376
YLH + IIHRD+ NI+L +L + D G A+ L T GT Y+A
Sbjct: 137 YLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELC-TEFVGTLQYLA 192
Query: 377 PELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
PEL T D +SFG + E + G P
Sbjct: 193 PELLEQKKYTVTVDYWSFGTLAFECITGFRP 223
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 11/205 (5%)
Query: 207 FDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIK-SFKNEAQVLSQVLHRNIV 265
+D R +GTG + V A+ + K E L + S +NE VL ++ H NIV
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIV 79
Query: 266 KLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDC 325
L ++LI + + G LF + E D ++ ++ + A+ YLH
Sbjct: 80 ALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASR---LIFQVLDAVKYLH--- 133
Query: 326 SPSIIHRDISSNNIL---LNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYT 382
I+HRD+ N+L L+ + ++DFG +++ S T GT GY+APE+
Sbjct: 134 DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTA-CGTPGYVAPEVLAQ 192
Query: 383 MVMTEKCDVYSFGVVTLEVLMGKHP 407
++ D +S GV+ +L G P
Sbjct: 193 KPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 99/216 (45%), Gaps = 22/216 (10%)
Query: 203 ATEDFDIRYCIGTGGYGSVYKAQLPN-GKVFALK--KLHTSEELAFIKSFKNEA--QVLS 257
AT ++ IG G YG+VYKA+ P+ G ALK ++ EE I + + A + L
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 258 QVLHRNIVKLYGYCLHKKC-----MFLIYEYMERGSLFCNLHNNEDAVE---LDWAKRVN 309
H N+V+L C + + L++E++++ +L D L +
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-----DLRTYLDKAPPPGLPAETIKD 116
Query: 310 IVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLA 369
+++ L +LH +C I+HRD+ NIL+ S +ADFG AR+ + ++
Sbjct: 117 LMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVVV 173
Query: 370 GTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGK 405
T Y APE+ D++S G + E+ K
Sbjct: 174 -TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 97/225 (43%), Gaps = 32/225 (14%)
Query: 206 DFDIRYCIGTGGYGSVYKAQLPNGKV---FALKKLHTSEELAFIKSFKNEAQVLSQVLHR 262
D + IG G +G V KA++ + A+K++ + F E +VL ++ H
Sbjct: 23 DIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHH 82
Query: 263 -NIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHN-------------NEDAVELDWAKRV 308
NI+ L G C H+ ++L EY G+L L N A L + +
Sbjct: 83 PNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLL 142
Query: 309 NIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLL 368
+ +A + YL IHR++++ NIL+ A +ADFG +R +
Sbjct: 143 HFAADVARGMDYLSQ---KQFIHRNLAARNILVGENYVAKIADFGLSR------GQEVYV 193
Query: 369 AGTYG-----YIAPELAYTMVMTEKCDVYSFGVVTLEVL-MGKHP 407
T G ++A E V T DV+S+GV+ E++ +G P
Sbjct: 194 KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTP 238
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 94/201 (46%), Gaps = 18/201 (8%)
Query: 213 IGTGGYGSVYKAQLP-----NGKVFALKKL-HTSEELAFIKSFKNEAQVLSQVLHRNIVK 266
+G G +GSV + G + A+K+L H+ + + F+ E Q+L + IVK
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQ--RDFQREIQILKALHSDFIVK 76
Query: 267 LYG--YCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHD 324
G Y ++ + L+ EY+ G L L + LD ++ + + + YL
Sbjct: 77 YRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHR--ARLDASRLLLYSSQICKGMEYLG-- 132
Query: 325 CSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSN---RTLLAGTYGYIAPELAY 381
S +HRD+++ NIL+ S+ +ADFG A+LL D R + APE
Sbjct: 133 -SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLS 191
Query: 382 TMVMTEKCDVYSFGVVTLEVL 402
+ + + DV+SFGVV E+
Sbjct: 192 DNIFSRQSDVWSFGVVLYELF 212
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 93/201 (46%), Gaps = 18/201 (8%)
Query: 213 IGTGGYGSVYKAQLP-----NGKVFALKKL-HTSEELAFIKSFKNEAQVLSQVLHRNIVK 266
+G G +GSV + G + A+K+L H+ + + F+ E Q+L + IVK
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQ--RDFQREIQILKALHSDFIVK 72
Query: 267 LYG--YCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHD 324
G Y + + L+ EY+ G L L + LD ++ + + + YL
Sbjct: 73 YRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHR--ARLDASRLLLYSSQICKGMEYLG-- 128
Query: 325 CSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSN---RTLLAGTYGYIAPELAY 381
S +HRD+++ NIL+ S+ +ADFG A+LL D R + APE
Sbjct: 129 -SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLS 187
Query: 382 TMVMTEKCDVYSFGVVTLEVL 402
+ + + DV+SFGVV E+
Sbjct: 188 DNIFSRQSDVWSFGVVLYELF 208
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 95/210 (45%), Gaps = 21/210 (10%)
Query: 207 FDIRYCIGTGGYGSVYKAQ------LPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVL 260
+D R +GTG + V A+ L K A K L E S +NE VL ++
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKE-----GSMENEIAVLHKIK 74
Query: 261 HRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAY 320
H NIV L ++LI + + G LF + E D ++ ++ + A+ Y
Sbjct: 75 HPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASR---LIFQVLDAVKY 131
Query: 321 LHHDCSPSIIHRDISSNNIL---LNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAP 377
LH I+HRD+ N+L L+ + ++DFG +++ S T GT GY+AP
Sbjct: 132 LH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTA-CGTPGYVAP 187
Query: 378 ELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
E+ ++ D +S GV+ +L G P
Sbjct: 188 EVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 94/201 (46%), Gaps = 18/201 (8%)
Query: 213 IGTGGYGSVYKAQLP-----NGKVFALKKL-HTSEELAFIKSFKNEAQVLSQVLHRNIVK 266
+G G +GSV + G + A+K+L H+ + + F+ E Q+L + IVK
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQ--RDFQREIQILKALHSDFIVK 88
Query: 267 LYG--YCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHD 324
G Y ++ + L+ EY+ G L L + LD ++ + + + YL
Sbjct: 89 YRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHR--ARLDASRLLLYSSQICKGMEYLG-- 144
Query: 325 CSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSN---RTLLAGTYGYIAPELAY 381
S +HRD+++ NIL+ S+ +ADFG A+LL D R + APE
Sbjct: 145 -SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLS 203
Query: 382 TMVMTEKCDVYSFGVVTLEVL 402
+ + + DV+SFGVV E+
Sbjct: 204 DNIFSRQSDVWSFGVVLYELF 224
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 111/269 (41%), Gaps = 30/269 (11%)
Query: 213 IGTGGYGSVYKAQLPN---GKV---FALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVK 266
+G G +G VY+ + G+ A+K ++ S L F NEA V+ ++V+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 267 LYGYCLHKKCMFLIYEYMERGSLFCNL-------HNNEDAVELDWAKRVNIVKAMAHALA 319
L G + ++ E M G L L NN + + + +A +A
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 320 YLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAG--TYGYIAP 377
YL+ + +HRD+++ N ++ + DFG R ++ + R G ++AP
Sbjct: 145 YLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVRWMAP 201
Query: 378 ELAYTMVMTEKCDVYSFGVVTLEVL-MGKHPRDIXXXXXXXXDPKIMLIDVLDQRLPPPV 436
E V T D++SFGVV E+ + + P +M LDQ P
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLK--FVMDGGYLDQ---PDN 256
Query: 437 DRKVIRDILLISTVSFACLQSNPKSRPTM 465
+ + D++ + C Q NPK RPT
Sbjct: 257 CPERVTDLMRM------CWQFNPKMRPTF 279
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 11/205 (5%)
Query: 207 FDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIK-SFKNEAQVLSQVLHRNIV 265
+D R +GTG + V A+ + K E L + S +NE VL ++ H NIV
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIV 79
Query: 266 KLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDC 325
L ++LI + + G LF + E D ++ ++ + A+ YLH
Sbjct: 80 ALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASR---LIFQVLDAVKYLH--- 133
Query: 326 SPSIIHRDISSNNIL---LNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYT 382
I+HRD+ N+L L+ + ++DFG +++ S T GT GY+APE+
Sbjct: 134 DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTA-CGTPGYVAPEVLAQ 192
Query: 383 MVMTEKCDVYSFGVVTLEVLMGKHP 407
++ D +S GV+ +L G P
Sbjct: 193 KPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 125/289 (43%), Gaps = 28/289 (9%)
Query: 213 IGTGGYGSVYKAQL-PNGKVFALKKLHTSEELAFI--KSFKNEAQVLSQVLHRNIVKLYG 269
+G GG+G V+ Q+ GK++A KKL+ + E ++L++V R IV L
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL-A 251
Query: 270 YCLHKKC-MFLIYEYMERGSLFCNLHN-NEDAVELDWAKRVNIVKAMAHALAYLHHDCSP 327
Y K + L+ M G + +++N +ED + + + L +LH
Sbjct: 252 YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR--- 308
Query: 328 SIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYTMVMTE 387
+II+RD+ N+LL+ ++D G A L A + AGT G++APEL
Sbjct: 309 NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDF 368
Query: 388 KCDVYSFGVVTLEVLMGKHPRDIXXXXXXXXDPKIMLIDVLDQRLPPPVDRKVIRDILLI 447
D ++ GV E++ + P + K + VL+Q + P D
Sbjct: 369 SVDYFALGVTLYEMIAARGP---FRARGEKVENKELKQRVLEQAVTYP-------DKFSP 418
Query: 448 STVSF--ACLQSNPKSRPTMQSVSQEFLITRKTPLVKHAAIQDISISEL 494
++ F A LQ +P+ R + S + L T H +DIS +L
Sbjct: 419 ASKDFCEALLQKDPEKRLGFRDGSCDGLRT-------HPLFRDISWRQL 460
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 122/278 (43%), Gaps = 36/278 (12%)
Query: 213 IGTGGYGSVYKAQ-LPNGKVFALKKLHTSEELAFIKSFKNEAQV-LSQVLHRNIVKLYGY 270
+G G YG V K + +P+G++ A+K++ + K + + + V V YG
Sbjct: 15 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGA 74
Query: 271 CLHKKCMFLIYEYMERG--SLFCNLHNNEDAVELDWAKR--VNIVKAMAHALAYLHHDCS 326
+ +++ E M+ + + + + D + V+IVKA+ H + L
Sbjct: 75 LFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL----- 129
Query: 327 PSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPEL------- 379
S+IHRD+ +N+L+N+ + + DFG + L D + + AG Y+APE
Sbjct: 130 -SVIHRDVKPSNVLINALGQVKMCDFGISGYL-VDDVAKDIDAGCKPYMAPERINPELNQ 187
Query: 380 -AYTMVMTEKCDVYSFGVVTLEVLMGKHPRDIXXXXXXXXDPKIMLIDVLDQRLPP-PVD 437
Y++ K D++S G+ +E+ + + P D P L V+++ P P D
Sbjct: 188 KGYSV----KSDIWSLGITMIELAILRFPYD------SWGTPFQQLKQVVEEPSPQLPAD 237
Query: 438 RKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLIT 475
+ + S CL+ N K RPT + Q T
Sbjct: 238 KFSAEFVDFTSQ----CLKKNSKERPTYPELMQHPFFT 271
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 11/205 (5%)
Query: 207 FDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIK-SFKNEAQVLSQVLHRNIV 265
+D R +GTG + V A+ + K E L + S +NE VL ++ H NIV
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIV 79
Query: 266 KLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDC 325
L ++LI + + G LF + E D ++ ++ + A+ YLH
Sbjct: 80 ALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASR---LIFQVLDAVKYLH--- 133
Query: 326 SPSIIHRDISSNNIL---LNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYT 382
I+HRD+ N+L L+ + ++DFG +++ S T GT GY+APE+
Sbjct: 134 DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTA-CGTPGYVAPEVLAQ 192
Query: 383 MVMTEKCDVYSFGVVTLEVLMGKHP 407
++ D +S GV+ +L G P
Sbjct: 193 KPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 130/299 (43%), Gaps = 31/299 (10%)
Query: 205 EDF--DIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSEELAFI--KSFKNEAQVLSQV 259
ED+ D R +G GG+G V+ Q+ GK++A KKL+ + E ++L++V
Sbjct: 184 EDWFLDFR-VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV 242
Query: 260 LHRNIVKLYGYCLHKKC-MFLIYEYMERGSLFCNLHN-NEDAVELDWAKRVNIVKAMAHA 317
R IV L Y K + L+ M G + +++N +ED + + +
Sbjct: 243 HSRFIVSL-AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSG 301
Query: 318 LAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAP 377
L +LH +II+RD+ N+LL+ ++D G A L A + AGT G++AP
Sbjct: 302 LEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAP 358
Query: 378 ELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDIXXXXXXXXDPKIMLIDVLDQRLPPPVD 437
EL D ++ GV E++ + P + K + VL+Q + P
Sbjct: 359 ELLLGEEYDFSVDYFALGVTLYEMIAARGP---FRARGEKVENKELKQRVLEQAVTYP-- 413
Query: 438 RKVIRDILLISTVSF--ACLQSNPKSRPTMQSVSQEFLITRKTPLVKHAAIQDISISEL 494
D ++ F A LQ +P+ R + S + L T H +DIS +L
Sbjct: 414 -----DKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRT-------HPLFRDISWRQL 460
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 130/299 (43%), Gaps = 31/299 (10%)
Query: 205 EDF--DIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSEELAFI--KSFKNEAQVLSQV 259
ED+ D R +G GG+G V+ Q+ GK++A KKL+ + E ++L++V
Sbjct: 184 EDWFLDFR-VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV 242
Query: 260 LHRNIVKLYGYCLHKKC-MFLIYEYMERGSLFCNLHN-NEDAVELDWAKRVNIVKAMAHA 317
R IV L Y K + L+ M G + +++N +ED + + +
Sbjct: 243 HSRFIVSL-AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSG 301
Query: 318 LAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAP 377
L +LH +II+RD+ N+LL+ ++D G A L A + AGT G++AP
Sbjct: 302 LEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAP 358
Query: 378 ELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDIXXXXXXXXDPKIMLIDVLDQRLPPPVD 437
EL D ++ GV E++ + P + K + VL+Q + P
Sbjct: 359 ELLLGEEYDFSVDYFALGVTLYEMIAARGP---FRARGEKVENKELKQRVLEQAVTYP-- 413
Query: 438 RKVIRDILLISTVSF--ACLQSNPKSRPTMQSVSQEFLITRKTPLVKHAAIQDISISEL 494
D ++ F A LQ +P+ R + S + L T H +DIS +L
Sbjct: 414 -----DKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRT-------HPLFRDISWRQL 460
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 97/200 (48%), Gaps = 11/200 (5%)
Query: 213 IGTGGYGSVYKA-QLPNGKVFALKKLHTSEELAF-IKSFKNEAQVLSQVLHRNIVKLYGY 270
+G G + V + ++ G+ +A K ++T + A + + EA++ + H NIV+L+
Sbjct: 30 LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 89
Query: 271 CLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSII 330
+ +LI++ + G LF ED V ++ + + L + H ++
Sbjct: 90 ISEEGHHYLIFDLVTGGELF------EDIVAREYYSEADASHCIQQILEAVLHCHQMGVV 143
Query: 331 HRDISSNNILLNSKLEAF---VADFGTARLLHADSSNRTLLAGTYGYIAPELAYTMVMTE 387
HRD+ N+LL SKL+ +ADFG A + + AGT GY++PE+ +
Sbjct: 144 HRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGK 203
Query: 388 KCDVYSFGVVTLEVLMGKHP 407
D+++ GV+ +L+G P
Sbjct: 204 PVDLWACGVILYILLVGYPP 223
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 72/150 (48%), Gaps = 9/150 (6%)
Query: 261 HRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAY 320
H NIVKL+ + FL+ E + G LF + + E + + I++ + A+++
Sbjct: 65 HPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEAS---YIMRKLVSAVSH 121
Query: 321 LHHDCSPSIIHRDISSNNILL---NSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAP 377
+H ++HRD+ N+L N LE + DFG ARL D+ T Y AP
Sbjct: 122 MH---DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAP 178
Query: 378 ELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
EL E CD++S GV+ +L G+ P
Sbjct: 179 ELLNQNGYDESCDLWSLGVILYTMLSGQVP 208
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 130/299 (43%), Gaps = 31/299 (10%)
Query: 205 EDF--DIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSEELAFI--KSFKNEAQVLSQV 259
ED+ D R +G GG+G V+ Q+ GK++A KKL+ + E ++L++V
Sbjct: 184 EDWFLDFR-VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV 242
Query: 260 LHRNIVKLYGYCLHKKC-MFLIYEYMERGSLFCNLHN-NEDAVELDWAKRVNIVKAMAHA 317
R IV L Y K + L+ M G + +++N +ED + + +
Sbjct: 243 HSRFIVSL-AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSG 301
Query: 318 LAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAP 377
L +LH +II+RD+ N+LL+ ++D G A L A + AGT G++AP
Sbjct: 302 LEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAP 358
Query: 378 ELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDIXXXXXXXXDPKIMLIDVLDQRLPPPVD 437
EL D ++ GV E++ + P + K + VL+Q + P
Sbjct: 359 ELLLGEEYDFSVDYFALGVTLYEMIAARGP---FRARGEKVENKELKQRVLEQAVTYP-- 413
Query: 438 RKVIRDILLISTVSF--ACLQSNPKSRPTMQSVSQEFLITRKTPLVKHAAIQDISISEL 494
D ++ F A LQ +P+ R + S + L T H +DIS +L
Sbjct: 414 -----DKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRT-------HPLFRDISWRQL 460
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 95/220 (43%), Gaps = 28/220 (12%)
Query: 213 IGTGGYGSVYKAQL-------PNGKV-FALKKLHTSEELAFIKSFKNEAQVLSQV-LHRN 263
+G G +G V A+ P V A+K L + +E +++ + H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 264 IVKLYGYCLHKKCMFLIYEYMERGSLFCNLH-------------NNEDAVELDWAKRVNI 310
I+ L G C +++I Y +G+L L N ++ + V+
Sbjct: 103 IINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 311 VKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAG 370
+A + YL S IHRD+++ N+L+ +ADFG AR ++ + G
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 371 T--YGYIAPELAYTMVMTEKCDVYSFGVVTLEVL-MGKHP 407
++APE + V T + DV+SFGV+ E+ +G P
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 95/215 (44%), Gaps = 40/215 (18%)
Query: 213 IGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVL--HRNIVKLYGY 270
IG G YG V+ + KV A+K T+EE ++ + E ++ VL H NI+
Sbjct: 45 IGKGRYGEVWMGKWRGEKV-AVKVFFTTEEASWFR----ETEIYQTVLMRHENILGFIAA 99
Query: 271 CLHKKC----MFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDC- 325
+ ++LI +Y E GSL+ L + LD + + + L +LH +
Sbjct: 100 DIKGTGSWTQLYLITDYHENGSLYDYL----KSTTLDAKSMLKLAYSSVSGLCHLHTEIF 155
Query: 326 ----SPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTL----LAGTYGYIAP 377
P+I HRD+ S NIL+ +AD G A +D++ + GT Y+ P
Sbjct: 156 STQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPP 215
Query: 378 EL-----------AYTMVMTEKCDVYSFGVVTLEV 401
E+ +Y M D+YSFG++ EV
Sbjct: 216 EVLDESLNRNHFQSYIMA-----DMYSFGLILWEV 245
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 102/219 (46%), Gaps = 22/219 (10%)
Query: 202 EATED-FDIRYCIGTGGYGSVYK-AQLPNGKVFALK-----KLHTSEELAFIKSFKNEAQ 254
E ED +++ +G+G + V K Q GK +A K +L +S + + E
Sbjct: 8 EDVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVN 67
Query: 255 VLSQVLHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAM 314
+L ++ H NI+ L+ +K + LI E + G LF L E E + +K +
Sbjct: 68 ILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTE---DEATQFLKQI 124
Query: 315 AHALAYLHHDCSPSIIHRDISSNNILL------NSKLEAFVADFGTARLLHADSSNRTLL 368
+ YLH S I H D+ NI+L N +++ + DFG A + A + + +
Sbjct: 125 LDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIK--LIDFGIAHKIEAGNEFKNIF 179
Query: 369 AGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
GT ++APE+ + + D++S GV+T +L G P
Sbjct: 180 -GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 109/268 (40%), Gaps = 30/268 (11%)
Query: 213 IGTGGYGSVYKAQLPN---GKV---FALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVK 266
+G G +G VY+ + G+ A+K ++ S L F NEA V+ ++V+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 267 LYGYCLHKKCMFLIYEYMERGSLFCNL-------HNNEDAVELDWAKRVNIVKAMAHALA 319
L G + ++ E M G L L NN + + + +A +A
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 320 YLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAG--TYGYIAP 377
YL+ + +HRD+++ N ++ + DFG R + R G ++AP
Sbjct: 145 YLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAP 201
Query: 378 ELAYTMVMTEKCDVYSFGVVTLEVL-MGKHPRDIXXXXXXXXDPKIMLIDVLDQRLPPPV 436
E V T D++SFGVV E+ + + P +M LDQ P
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLK--FVMDGGYLDQ---PDN 256
Query: 437 DRKVIRDILLISTVSFACLQSNPKSRPT 464
+ + D++ + C Q NPK RPT
Sbjct: 257 CPERVTDLMRM------CWQFNPKMRPT 278
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 99/214 (46%), Gaps = 30/214 (14%)
Query: 213 IGTGGYGSVYKAQL------PNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVK 266
+G +G VYK L + A+K L E + F++EA + +++ H N+V
Sbjct: 34 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 93
Query: 267 LYGYCLHKKCMFLIYEYMERGSLFCNL-----HNNEDAVELDWAKR--------VNIVKA 313
L G + + +I+ Y G L L H++ + + D + V++V
Sbjct: 94 LLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQ 153
Query: 314 MAHALAYL--HHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGT 371
+A + YL HH ++H+D+++ N+L+ KL ++D G R ++A + LL +
Sbjct: 154 IAAGMEYLSSHH-----VVHKDLATRNVLVYDKLNVKISDLGLFREVYA-ADYYKLLGNS 207
Query: 372 Y---GYIAPELAYTMVMTEKCDVYSFGVVTLEVL 402
++APE + D++S+GVV EV
Sbjct: 208 LLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVF 241
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 96/221 (43%), Gaps = 41/221 (18%)
Query: 213 IGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVL--HRNIVKL--- 267
IG G YG+VYK L V A+K + FI NE + L H NI +
Sbjct: 21 IGRGRYGAVYKGSLDERPV-AVKVFSFANRQNFI----NEKNIYRVPLMEHDNIARFIVG 75
Query: 268 --YGYCLHKKCMFLIYEYMERGSL--FCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHH 323
+ L+ EY GSL + +LH + DW + ++ LAYLH
Sbjct: 76 DERVTADGRMEYLLVMEYYPNGSLXKYLSLHTS------DWVSSCRLAHSVTRGLAYLHT 129
Query: 324 DC------SPSIIHRDISSNNILLNSKLEAFVADFGTA------RLLHADSSNRTLLA-- 369
+ P+I HRD++S N+L+ + ++DFG + RL+ + ++
Sbjct: 130 ELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEV 189
Query: 370 GTYGYIAPELAYTMV-------MTEKCDVYSFGVVTLEVLM 403
GT Y+APE+ V ++ D+Y+ G++ E+ M
Sbjct: 190 GTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFM 230
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 109/268 (40%), Gaps = 30/268 (11%)
Query: 213 IGTGGYGSVYKAQLPN---GKV---FALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVK 266
+G G +G VY+ + G+ A+K ++ S L F NEA V+ ++V+
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 81
Query: 267 LYGYCLHKKCMFLIYEYMERGSLFCNL-------HNNEDAVELDWAKRVNIVKAMAHALA 319
L G + ++ E M G L L NN + + + +A +A
Sbjct: 82 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 141
Query: 320 YLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAG--TYGYIAP 377
YL+ + +HRD+++ N ++ + DFG R + R G ++AP
Sbjct: 142 YLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAP 198
Query: 378 ELAYTMVMTEKCDVYSFGVVTLEVL-MGKHPRDIXXXXXXXXDPKIMLIDVLDQRLPPPV 436
E V T D++SFGVV E+ + + P +M LDQ P
Sbjct: 199 ESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLK--FVMDGGYLDQ---PDN 253
Query: 437 DRKVIRDILLISTVSFACLQSNPKSRPT 464
+ + D++ + C Q NPK RPT
Sbjct: 254 CPERVTDLMRM------CWQFNPKMRPT 275
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 96/211 (45%), Gaps = 14/211 (6%)
Query: 203 ATEDFDIRYCIGTGGYGSVYKAQLPN-GKVFALKKLHTSEELAF--IKSFKNEAQVLSQV 259
++F+ +G G +G V A++ G ++A+K L L ++ E ++LS
Sbjct: 21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILS-- 78
Query: 260 LHRN---IVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAH 316
L RN + +L+ +F + E++ G L ++ + D A+ +
Sbjct: 79 LARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSR---RFDEARARFYAAEIIS 135
Query: 317 ALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIA 376
AL +LH II+RD+ +N+LL+ + +ADFG + + GT YIA
Sbjct: 136 ALMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIA 192
Query: 377 PELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
PE+ M+ D ++ GV+ E+L G P
Sbjct: 193 PEILQEMLYGPAVDWWAMGVLLYEMLCGHAP 223
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 99/214 (46%), Gaps = 30/214 (14%)
Query: 213 IGTGGYGSVYKAQL------PNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVK 266
+G +G VYK L + A+K L E + F++EA + +++ H N+V
Sbjct: 17 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 76
Query: 267 LYGYCLHKKCMFLIYEYMERGSLFCNL-----HNNEDAVELDWAKR--------VNIVKA 313
L G + + +I+ Y G L L H++ + + D + V++V
Sbjct: 77 LLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQ 136
Query: 314 MAHALAYL--HHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGT 371
+A + YL HH ++H+D+++ N+L+ KL ++D G R ++A + LL +
Sbjct: 137 IAAGMEYLSSHH-----VVHKDLATRNVLVYDKLNVKISDLGLFREVYA-ADYYKLLGNS 190
Query: 372 Y---GYIAPELAYTMVMTEKCDVYSFGVVTLEVL 402
++APE + D++S+GVV EV
Sbjct: 191 LLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVF 224
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 110/269 (40%), Gaps = 30/269 (11%)
Query: 213 IGTGGYGSVYKAQLPN---GKV---FALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVK 266
+G G +G VY+ + G+ A+K ++ S L F NEA V+ ++V+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 267 LYGYCLHKKCMFLIYEYMERGSLFCNL-------HNNEDAVELDWAKRVNIVKAMAHALA 319
L G + ++ E M G L L NN + + + +A +A
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 320 YLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAG--TYGYIAP 377
YL+ + +HRD+++ N ++ + DFG R ++ R G ++AP
Sbjct: 145 YLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 201
Query: 378 ELAYTMVMTEKCDVYSFGVVTLEVL-MGKHPRDIXXXXXXXXDPKIMLIDVLDQRLPPPV 436
E V T D++SFGVV E+ + + P +M LDQ P
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLK--FVMDGGYLDQ---PDN 256
Query: 437 DRKVIRDILLISTVSFACLQSNPKSRPTM 465
+ + D++ + C Q NPK RPT
Sbjct: 257 CPERVTDLMRM------CWQFNPKMRPTF 279
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 104/219 (47%), Gaps = 17/219 (7%)
Query: 198 EDLIEATEDFDIRYCIGTGGYGSVYKAQ-LPNGKVF-ALKKL--HTSEELAFIKSFKNEA 253
+ L A + ++ IG G YG V+KA+ L NG F ALK++ T EE + + + A
Sbjct: 4 DGLCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVA 63
Query: 254 --QVLSQVLHRNIVKLYGYCLHKKC-----MFLIYEYMERGSLFCNLHNNEDAVELDWAK 306
+ L H N+V+L+ C + + L++E++++ E V + K
Sbjct: 64 VLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIK 123
Query: 307 RVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRT 366
+++ + L +LH S ++HRD+ NIL+ S + +ADFG AR +++ T
Sbjct: 124 --DMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLAR-IYSFQMALT 177
Query: 367 LLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGK 405
+ T Y APE+ D++S G + E+ K
Sbjct: 178 SVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 95/220 (43%), Gaps = 28/220 (12%)
Query: 213 IGTGGYGSVYKAQL-------PNGKV-FALKKLHTSEELAFIKSFKNEAQVLSQV-LHRN 263
+G G +G V A+ P V A+K L + +E +++ + H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 264 IVKLYGYCLHKKCMFLIYEYMERGSLFCNLH-------------NNEDAVELDWAKRVNI 310
I+ L G C +++I Y +G+L L N ++ + V+
Sbjct: 103 IINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 311 VKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAG 370
+A + YL S IHRD+++ N+L+ +ADFG AR ++ + G
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 371 T--YGYIAPELAYTMVMTEKCDVYSFGVVTLEVL-MGKHP 407
++APE + V T + DV+SFGV+ E+ +G P
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 97/207 (46%), Gaps = 21/207 (10%)
Query: 213 IGTGGYGSVYK-AQLPNGKVFALK-----KLHTSEELAFIKSFKNEAQVLSQVLHRNIVK 266
+G+G + V K Q GK +A K +L +S + + E +L ++ H NI+
Sbjct: 13 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIIT 72
Query: 267 LYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCS 326
L+ +K + LI E + G LF L E E D A +K + + YLH S
Sbjct: 73 LHDIFENKTDVVLILELVSGGELFDFLAEKESLTE-DEA--TQFLKQILDGVHYLH---S 126
Query: 327 PSIIHRDISSNNILL------NSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELA 380
I H D+ NI+L N +++ + DFG A + A + + + GT ++APE+
Sbjct: 127 KRIAHFDLKPENIMLLDKNVPNPRIK--LIDFGIAHKIEAGNEFKNIF-GTPEFVAPEIV 183
Query: 381 YTMVMTEKCDVYSFGVVTLEVLMGKHP 407
+ + D++S GV+T +L G P
Sbjct: 184 NYEPLGLEADMWSIGVITYILLSGASP 210
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 110/268 (41%), Gaps = 30/268 (11%)
Query: 213 IGTGGYGSVYKAQLPN---GKV---FALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVK 266
+G G +G VY+ + G+ A+K ++ S L F NEA V+ ++V+
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 83
Query: 267 LYGYCLHKKCMFLIYEYMERGSLFCNL-------HNNEDAVELDWAKRVNIVKAMAHALA 319
L G + ++ E M G L L NN + + + +A +A
Sbjct: 84 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 143
Query: 320 YLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAG--TYGYIAP 377
YL+ + +HRD+++ N ++ + DFG R ++ R G ++AP
Sbjct: 144 YLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 200
Query: 378 ELAYTMVMTEKCDVYSFGVVTLEVL-MGKHPRDIXXXXXXXXDPKIMLIDVLDQRLPPPV 436
E V T D++SFGVV E+ + + P +M LDQ P
Sbjct: 201 ESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLK--FVMDGGYLDQ---PDN 255
Query: 437 DRKVIRDILLISTVSFACLQSNPKSRPT 464
+ + D++ + C Q NPK RPT
Sbjct: 256 CPERVTDLMRM------CWQFNPKMRPT 277
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 104/219 (47%), Gaps = 17/219 (7%)
Query: 198 EDLIEATEDFDIRYCIGTGGYGSVYKAQ-LPNGKVF-ALKKL--HTSEELAFIKSFKNEA 253
+ L A + ++ IG G YG V+KA+ L NG F ALK++ T EE + + + A
Sbjct: 4 DGLCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVA 63
Query: 254 --QVLSQVLHRNIVKLYGYCLHKKC-----MFLIYEYMERGSLFCNLHNNEDAVELDWAK 306
+ L H N+V+L+ C + + L++E++++ E V + K
Sbjct: 64 VLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIK 123
Query: 307 RVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRT 366
+++ + L +LH S ++HRD+ NIL+ S + +ADFG AR +++ T
Sbjct: 124 --DMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLAR-IYSFQMALT 177
Query: 367 LLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGK 405
+ T Y APE+ D++S G + E+ K
Sbjct: 178 SVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 107/225 (47%), Gaps = 23/225 (10%)
Query: 195 IVYEDLIEATEDFDIRYCIGTGGYGSVYK-AQLPNGKVFALK-----KLHTSEELAFIKS 248
+ ++ ++E + +++ +G+G + V K Q GK +A K +L +S +
Sbjct: 18 LYFQSMVE--DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREE 75
Query: 249 FKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRV 308
+ E +L ++ H NI+ L+ +K + LI E + G LF L E E D A
Sbjct: 76 IEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTE-DEA--T 132
Query: 309 NIVKAMAHALAYLHHDCSPSIIHRDISSNNILL------NSKLEAFVADFGTARLLHADS 362
+K + + YLH S I H D+ NI+L N +++ + DFG A + A +
Sbjct: 133 QFLKQILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIK--LIDFGIAHKIEAGN 187
Query: 363 SNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
+ + GT ++APE+ + + D++S GV+T +L G P
Sbjct: 188 EFKNIF-GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 231
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 104/219 (47%), Gaps = 17/219 (7%)
Query: 198 EDLIEATEDFDIRYCIGTGGYGSVYKAQ-LPNGKVF-ALKKL--HTSEELAFIKSFKNEA 253
+ L A + ++ IG G YG V+KA+ L NG F ALK++ T EE + + + A
Sbjct: 4 DGLCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVA 63
Query: 254 --QVLSQVLHRNIVKLYGYCLHKKC-----MFLIYEYMERGSLFCNLHNNEDAVELDWAK 306
+ L H N+V+L+ C + + L++E++++ E V + K
Sbjct: 64 VLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIK 123
Query: 307 RVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRT 366
+++ + L +LH S ++HRD+ NIL+ S + +ADFG AR +++ T
Sbjct: 124 --DMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLAR-IYSFQMALT 177
Query: 367 LLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGK 405
+ T Y APE+ D++S G + E+ K
Sbjct: 178 SVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 98/226 (43%), Gaps = 39/226 (17%)
Query: 203 ATEDFDIRYCIGTGGYGSVYKAQLPN-GKVFALKKLH--------------TSEELAFIK 247
AT ++ IG G YG+VYKA+ P+ G ALK + T E+A ++
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLR 66
Query: 248 SFKNEAQVLSQVLHRNIVKLYGYCLHKKC-----MFLIYEYMERGSLFCNLHNNEDAVE- 301
L H N+V+L C + + L++E++++ +L D
Sbjct: 67 R-------LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-----DLRTYLDKAPP 114
Query: 302 --LDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLH 359
L ++++ L +LH +C I+HRD+ NIL+ S +ADFG AR ++
Sbjct: 115 PGLPAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLAR-IY 170
Query: 360 ADSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGK 405
+ T + T Y APE+ D++S G + E+ K
Sbjct: 171 SYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 216
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 101/209 (48%), Gaps = 11/209 (5%)
Query: 204 TEDFDIRYCIGTGGYGSVYKA-QLPNGKVFALKKLHTSEELAF-IKSFKNEAQVLSQVLH 261
TE++ + +G G + V + ++ G+ +A ++T + A + + EA++ + H
Sbjct: 10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKH 69
Query: 262 RNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYL 321
NIV+L+ + +LI++ + G LF ED V ++ + + L +
Sbjct: 70 PNIVRLHDSISEEGHHYLIFDLVTGGELF------EDIVAREYYSEADASHCIQQILEAV 123
Query: 322 HHDCSPSIIHRDISSNNILLNSKLEAF---VADFGTARLLHADSSNRTLLAGTYGYIAPE 378
H ++HR++ N+LL SKL+ +ADFG A + + AGT GY++PE
Sbjct: 124 LHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPE 183
Query: 379 LAYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
+ + D+++ GV+ +L+G P
Sbjct: 184 VLRKDPYGKPVDLWACGVILYILLVGYPP 212
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 108/239 (45%), Gaps = 45/239 (18%)
Query: 205 EDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEA----------- 253
E+ + +G+G +G V N + + K S ++A +K K +A
Sbjct: 45 ENLEFGKVLGSGAFGKV-----MNATAYGISKTGVSIQVA-VKMLKEKADSSEREALMSE 98
Query: 254 -QVLSQV-LHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHN-----NEDAVELDWAK 306
++++Q+ H NIV L G C ++LI+EY G L L + +ED +E + K
Sbjct: 99 LKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQK 158
Query: 307 RVN---------------IVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVAD 351
R+ +A + +L S +HRD+++ N+L+ + D
Sbjct: 159 RLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEF---KSCVHRDLAARNVLVTHGKVVKICD 215
Query: 352 FGTARLLHADSSN--RTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVL-MGKHP 407
FG AR + +DS+ R ++APE + + T K DV+S+G++ E+ +G +P
Sbjct: 216 FGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNP 274
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 86/196 (43%), Gaps = 9/196 (4%)
Query: 213 IGTGGYGSVYKA-QLPNGKVFALKKLHTS-EELAFIKSFKNEAQVLSQVLHRNIVKLYGY 270
+G+G YGSV A +G+ A+KKL + F K E +L + H N++ L
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 109
Query: 271 CLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSII 330
+ Y++ +E K +V M L Y+H S ++
Sbjct: 110 FTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQYLVYQMLKGLKYIH---SAGVV 166
Query: 331 HRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYT-MVMTEKC 389
HRD+ N+ +N E + DFG AR HAD + T T Y APE+ + M +
Sbjct: 167 HRDLKPGNLAVNEDCELKILDFGLAR--HAD-AEMTGYVVTRWYRAPEVILSWMHYNQTV 223
Query: 390 DVYSFGVVTLEVLMGK 405
D++S G + E+L GK
Sbjct: 224 DIWSVGCIMAEMLTGK 239
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 104/221 (47%), Gaps = 37/221 (16%)
Query: 213 IGTGGYGSVYKA-QLPNGKVFALKKLHTSEELAF--IKSFKNEAQVLSQVL-HRNIVKLY 268
+G G YG V+K+ G+V A+KK+ + + + ++F+ E +L+++ H NIV L
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFR-EIMILTELSGHENIVNLL 75
Query: 269 GYCL--HKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCS 326
+ + ++L+++YME +LH A L+ + +V + + YLH S
Sbjct: 76 NVLRADNDRDVYLVFDYME-----TDLHAVIRANILEPVHKQYVVYQLIKVIKYLH---S 127
Query: 327 PSIIHRDISSNNILLNSKLEAFVADFGTARL---------------------LHADSSNR 365
++HRD+ +NILLN++ VADFG +R D
Sbjct: 128 GGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPIL 187
Query: 366 TLLAGTYGYIAPE-LAYTMVMTEKCDVYSFGVVTLEVLMGK 405
T T Y APE L + T+ D++S G + E+L GK
Sbjct: 188 TDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 101/215 (46%), Gaps = 9/215 (4%)
Query: 198 EDLIEATEDFDIRYCIGTGGYGSVYKA-QLPNGKVFALKKLHTSEELAFIKSFKNEAQVL 256
+D E + +++ IGTGG+ V A + G++ A+K + + + + K E + L
Sbjct: 3 KDYDELLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEAL 62
Query: 257 SQVLHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAH 316
+ H++I +LY +F++ EY G LF + + + E + RV + + +
Sbjct: 63 KNLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEE--TRV-VFRQIVS 119
Query: 317 ALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFG-TARLLHADSSNRTLLAGTYGYI 375
A+AY+H S HRD+ N+L + + + DFG A+ + G+ Y
Sbjct: 120 AVAYVH---SQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYA 176
Query: 376 APELAY-TMVMTEKCDVYSFGVVTLEVLMGKHPRD 409
APEL + + DV+S G++ ++ G P D
Sbjct: 177 APELIQGKSYLGSEADVWSMGILLYVLMCGFLPFD 211
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 96/197 (48%), Gaps = 12/197 (6%)
Query: 213 IGTGGYGSVYKAQLPN-GKVFALKKL---HTSEELAFI-KSFKNEAQVLSQVLHRNIVKL 267
+G G + +VYKA+ N ++ A+KK+ H SE I ++ E ++L ++ H NI+ L
Sbjct: 18 LGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGL 77
Query: 268 YGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSP 327
HK + L++++ME L + +N + K ++ L YLH
Sbjct: 78 LDAFGHKSNISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLM--TLQGLEYLHQHW-- 132
Query: 328 SIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYTMVMTE 387
I+HRD+ NN+LL+ +ADFG A+ + + T Y APEL + M
Sbjct: 133 -ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVVTRWYRAPELLFGARMYG 191
Query: 388 -KCDVYSFGVVTLEVLM 403
D+++ G + E+L+
Sbjct: 192 VGVDMWAVGCILAELLL 208
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 86/204 (42%), Gaps = 18/204 (8%)
Query: 213 IGTGGYGSVYKAQLPN---GKV---FALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVK 266
+G G +G VY+ + G+ A+K ++ S L F NEA V+ ++V+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 267 LYGYCLHKKCMFLIYEYMERGSLFCNL-------HNNEDAVELDWAKRVNIVKAMAHALA 319
L G + ++ E M G L L NN + + + +A +A
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 320 YLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAG--TYGYIAP 377
YL+ + +HRD+++ N ++ + DFG R + R G ++AP
Sbjct: 145 YLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAP 201
Query: 378 ELAYTMVMTEKCDVYSFGVVTLEV 401
E V T D++SFGVV E+
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 125/291 (42%), Gaps = 35/291 (12%)
Query: 203 ATEDFDIR-------YCIGTGGYGSVYKAQ-LPNGKVFALKKLHTSEELAFIKSFKNEAQ 254
A E+F+++ +G G YG V K + +P+G++ A+K++ + K +
Sbjct: 25 AXENFEVKADDLEPIXELGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDLD 84
Query: 255 VLSQVLHRNI-VKLYGYCLHKKCMFLIYEYMERG--SLFCNLHNNEDAVELDWAKR--VN 309
+ + + V YG + +++ E + + + + + D + V+
Sbjct: 85 ISXRTVDCPFTVTFYGALFREGDVWICXELXDTSLDKFYKQVIDKGQTIPEDILGKIAVS 144
Query: 310 IVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLA 369
IVKA+ H + L S+IHRD+ +N+L+N+ + DFG + L D + + A
Sbjct: 145 IVKALEHLHSKL------SVIHRDVKPSNVLINALGQVKXCDFGISGYL-VDDVAKDIDA 197
Query: 370 GTYGYIAPELAYTMVMTE----KCDVYSFGVVTLEVLMGKHPRDIXXXXXXXXDPKIMLI 425
G Y APE + + K D++S G+ +E+ + + P D P L
Sbjct: 198 GCKPYXAPERINPELNQKGYSVKSDIWSLGITXIELAILRFPYD------SWGTPFQQLK 251
Query: 426 DVLDQRLPP-PVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLIT 475
V+++ P P D+ + S CL+ N K RPT + Q T
Sbjct: 252 QVVEEPSPQLPADKFSAEFVDFTSQ----CLKKNSKERPTYPELXQHPFFT 298
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 81/162 (50%), Gaps = 15/162 (9%)
Query: 252 EAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIV 311
EA V+ Q+ + IV++ G C + M L+ E E G L L N + + + +V
Sbjct: 420 EANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKN---IIELV 475
Query: 312 KAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGT 371
++ + YL + +HRD+++ N+LL ++ A ++DFG ++ L AD + A T
Sbjct: 476 HQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN--YYKAQT 530
Query: 372 YG-----YIAPELAYTMVMTEKCDVYSFGVVTLEVL-MGKHP 407
+G + APE + K DV+SFGV+ E G+ P
Sbjct: 531 HGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 572
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 81/162 (50%), Gaps = 15/162 (9%)
Query: 252 EAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIV 311
EA V+ Q+ + IV++ G C + M L+ E E G L L N + + + +V
Sbjct: 421 EANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKN---IIELV 476
Query: 312 KAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGT 371
++ + YL + +HRD+++ N+LL ++ A ++DFG ++ L AD + A T
Sbjct: 477 HQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN--YYKAQT 531
Query: 372 YG-----YIAPELAYTMVMTEKCDVYSFGVVTLEVL-MGKHP 407
+G + APE + K DV+SFGV+ E G+ P
Sbjct: 532 HGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 573
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 98/205 (47%), Gaps = 19/205 (9%)
Query: 213 IGTGGYGSVYKA--QLPNGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLHRNIVKLY 268
+G+G +G+V K Q+ K+ +E + A EA V+ Q+ + IV++
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 269 GYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPS 328
G C + M L+ E E G L L N + + + +V ++ + YL +
Sbjct: 95 GICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKN---IIELVHQVSMGMKYLEES---N 147
Query: 329 IIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYG-----YIAPELAYTM 383
+HRD+++ N+LL ++ A ++DFG ++ L AD + A T+G + APE
Sbjct: 148 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN--YYKAQTHGKWPVKWYAPECINYY 205
Query: 384 VMTEKCDVYSFGVVTLEVL-MGKHP 407
+ K DV+SFGV+ E G+ P
Sbjct: 206 KFSSKSDVWSFGVLMWEAFSYGQKP 230
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 98/205 (47%), Gaps = 19/205 (9%)
Query: 213 IGTGGYGSVYKA--QLPNGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLHRNIVKLY 268
+G+G +G+V K Q+ K+ +E + A EA V+ Q+ + IV++
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 269 GYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPS 328
G C + M L+ E E G L L N + + + +V ++ + YL +
Sbjct: 95 GICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKN---IIELVHQVSMGMKYLEES---N 147
Query: 329 IIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYG-----YIAPELAYTM 383
+HRD+++ N+LL ++ A ++DFG ++ L AD + A T+G + APE
Sbjct: 148 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN--YYKAQTHGKWPVKWYAPECINYY 205
Query: 384 VMTEKCDVYSFGVVTLEVL-MGKHP 407
+ K DV+SFGV+ E G+ P
Sbjct: 206 KFSSKSDVWSFGVLMWEAFSYGQKP 230
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 98/205 (47%), Gaps = 19/205 (9%)
Query: 213 IGTGGYGSVYKA--QLPNGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLHRNIVKLY 268
+G+G +G+V K Q+ K+ +E + A EA V+ Q+ + IV++
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 269 GYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPS 328
G C + M L+ E E G L L N + + + +V ++ + YL +
Sbjct: 79 GICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKN---IIELVHQVSMGMKYLEES---N 131
Query: 329 IIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYG-----YIAPELAYTM 383
+HRD+++ N+LL ++ A ++DFG ++ L AD + A T+G + APE
Sbjct: 132 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYK--AQTHGKWPVKWYAPECINYY 189
Query: 384 VMTEKCDVYSFGVVTLEVL-MGKHP 407
+ K DV+SFGV+ E G+ P
Sbjct: 190 KFSSKSDVWSFGVLMWEAFSYGQKP 214
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 97/211 (45%), Gaps = 12/211 (5%)
Query: 203 ATEDFDIRYCIGTGGYGSVYKAQLPNGKV----FALKKLHTSEELAFIKSFKNEAQVLSQ 258
A ED + +G G +G VY+ N K A+K L + F +EA ++
Sbjct: 22 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 81
Query: 259 VLHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHAL 318
+ H +IVKL G + ++ ++I E G L L N++++++ V + A+
Sbjct: 82 LDHPHIVKLIG-IIEEEPTWIIMELYPYGELGHYLERNKNSLKV--LTLVLYSLQICKAM 138
Query: 319 AYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLH-ADSSNRTLLAGTYGYIAP 377
AYL S + +HRDI+ NIL+ S + DFG +R + D ++ +++P
Sbjct: 139 AYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSP 195
Query: 378 ELAYTMVMTEKCDVYSFGVVTLEVL-MGKHP 407
E T DV+ F V E+L GK P
Sbjct: 196 ESINFRRFTTASDVWMFAVCMWEILSFGKQP 226
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 119/271 (43%), Gaps = 31/271 (11%)
Query: 203 ATEDFDIRYCIGTGGYGSVYKAQLPNGKV----FALKKLHTSEELAFIKSFKNEAQVLSQ 258
A ED + +G G +G VY+ N K A+K L + F +EA ++
Sbjct: 6 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 65
Query: 259 VLHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHAL 318
+ H +IVKL G + ++ ++I E G L L N++++++ V + A+
Sbjct: 66 LDHPHIVKLIG-IIEEEPTWIIMELYPYGELGHYLERNKNSLKV--LTLVLYSLQICKAM 122
Query: 319 AYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLH-ADSSNRTLLAGTYGYIAP 377
AYL S + +HRDI+ NIL+ S + DFG +R + D ++ +++P
Sbjct: 123 AYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSP 179
Query: 378 ELAYTMVMTEKCDVYSFGVVTLEVL-MGKHPRDIXXXXXXXXDPKIMLIDVLDQ--RLPP 434
E T DV+ F V E+L GK P D +I VL++ RLP
Sbjct: 180 ESINFRRFTTASDVWMFAVCMWEILSFGKQP----FFWLENKD----VIGVLEKGDRLPK 231
Query: 435 PVDRKVIRDIL--LISTVSFACLQSNPKSRP 463
P D+ ++ T+ C +P RP
Sbjct: 232 P-------DLCPPVLYTLMTRCWDYDPSDRP 255
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 92/203 (45%), Gaps = 23/203 (11%)
Query: 213 IGTGGYGSVYKA-QLPNGKVFALKKLHTS-EELAFIKSFKNEAQVLSQVLHRNIVKLYGY 270
+G+G YGSV A +G+ A+KKL + F K E +L + H N++ L
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 91
Query: 271 CLHKKCM------FLIYEYMERG-SLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHH 323
+ +L+ +M+ L +E+ ++ +V M L Y+H
Sbjct: 92 FTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQY-------LVYQMLKGLKYIH- 143
Query: 324 DCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYT- 382
S ++HRD+ N+ +N E + DFG AR HAD + T T Y APE+ +
Sbjct: 144 --SAGVVHRDLKPGNLAVNEDCELKILDFGLAR--HAD-AEMTGYVVTRWYRAPEVILSW 198
Query: 383 MVMTEKCDVYSFGVVTLEVLMGK 405
M + D++S G + E+L GK
Sbjct: 199 MHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 94/204 (46%), Gaps = 16/204 (7%)
Query: 212 CIGTGGYGSVYKAQ-LPNGKVFALKKLHTSE-ELAFIKSFKNEAQVLSQVLHRNIVKLYG 269
IG G + V A+ + GK A+K + ++ + ++ E +++ + H NIVKL+
Sbjct: 14 TIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFE 73
Query: 270 YCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNI---VKAMAHALAYLHHDCS 326
+K ++L+ EY G +F L V W K + + A+ Y H
Sbjct: 74 VIETEKTLYLVMEYASGGEVFDYL------VAHGWMKEKEARAKFRQIVSAVQYCHQKF- 126
Query: 327 PSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYTMVMT 386
I+HRD+ + N+LL++ + +ADFG + + T G+ Y APEL
Sbjct: 127 --IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT-FCGSPPYAAPELFQGKKYD 183
Query: 387 E-KCDVYSFGVVTLEVLMGKHPRD 409
+ DV+S GV+ ++ G P D
Sbjct: 184 GPEVDVWSLGVILYTLVSGSLPFD 207
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 98/205 (47%), Gaps = 19/205 (9%)
Query: 213 IGTGGYGSVYKA--QLPNGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLHRNIVKLY 268
+G+G +G+V K Q+ K+ +E + A EA V+ Q+ + IV++
Sbjct: 33 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 92
Query: 269 GYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPS 328
G C + M L+ E E G L L N + + + +V ++ + YL +
Sbjct: 93 GICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKN---IIELVHQVSMGMKYLEES---N 145
Query: 329 IIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYG-----YIAPELAYTM 383
+HRD+++ N+LL ++ A ++DFG ++ L AD + A T+G + APE
Sbjct: 146 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN--YYKAQTHGKWPVKWYAPECINYY 203
Query: 384 VMTEKCDVYSFGVVTLEVL-MGKHP 407
+ K DV+SFGV+ E G+ P
Sbjct: 204 KFSSKSDVWSFGVLMWEAFSYGQKP 228
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 119/271 (43%), Gaps = 31/271 (11%)
Query: 203 ATEDFDIRYCIGTGGYGSVYKAQLPNGKV----FALKKLHTSEELAFIKSFKNEAQVLSQ 258
A ED + +G G +G VY+ N K A+K L + F +EA ++
Sbjct: 10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 69
Query: 259 VLHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHAL 318
+ H +IVKL G + ++ ++I E G L L N++++++ V + A+
Sbjct: 70 LDHPHIVKLIG-IIEEEPTWIIMELYPYGELGHYLERNKNSLKV--LTLVLYSLQICKAM 126
Query: 319 AYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLH-ADSSNRTLLAGTYGYIAP 377
AYL S + +HRDI+ NIL+ S + DFG +R + D ++ +++P
Sbjct: 127 AYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSP 183
Query: 378 ELAYTMVMTEKCDVYSFGVVTLEVL-MGKHPRDIXXXXXXXXDPKIMLIDVLDQ--RLPP 434
E T DV+ F V E+L GK P D +I VL++ RLP
Sbjct: 184 ESINFRRFTTASDVWMFAVCMWEILSFGKQP----FFWLENKD----VIGVLEKGDRLPK 235
Query: 435 PVDRKVIRDIL--LISTVSFACLQSNPKSRP 463
P D+ ++ T+ C +P RP
Sbjct: 236 P-------DLCPPVLYTLMTRCWDYDPSDRP 259
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 91/194 (46%), Gaps = 20/194 (10%)
Query: 228 NGKVFALKKLHTSEELAFIKSFKNEAQVLSQV-LHRN---------IVKLY-GYCLHKKC 276
NGKV + T E+ A +K ++ + +V LH IV +Y +KC
Sbjct: 37 NGKVLQIFNKRTQEKFA-LKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKC 95
Query: 277 MFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISS 336
+ ++ E ++ G LF + + D + + I+K++ A+ YLH S +I HRD+
Sbjct: 96 LLIVMECLDGGELFSRIQDRGDQAFTE-REASEIMKSIGEAIQYLH---SINIAHRDVKP 151
Query: 337 NNILLNSKLEAFV---ADFGTARLLHADSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYS 393
N+L SK + DFG A+ + +S T Y Y+APE+ + CD++S
Sbjct: 152 ENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWS 210
Query: 394 FGVVTLEVLMGKHP 407
GV+ +L G P
Sbjct: 211 LGVIMYILLCGYPP 224
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 56/89 (62%), Gaps = 2/89 (2%)
Query: 53 GKIPPEIASMKYLTQLDLSNNNIQGSIPGEITKLSRLDYLNLSSNKLSGPVPFSNNDLSS 112
G IP EI SM YL L+L +N+I GSIP E+ L L+ L+LSSNKL G +P + + L +
Sbjct: 643 GYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSAL-T 701
Query: 113 MHTVVSLSPNNGLCGNILDLPSCDTTKPA 141
M T + LS NN L G I ++ +T PA
Sbjct: 702 MLTEIDLS-NNNLSGPIPEMGQFETFPPA 729
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 62/137 (45%), Gaps = 38/137 (27%)
Query: 5 GIIPPEIGNLKNLIKLDVGSNSLIGPIPSAXXXXXXXXXXXXXXXXXXGKIPPEIASMKY 64
G IP EIG++ L L++G N + G IP E+ ++
Sbjct: 643 GYIPKEIGSMPYLFILNLGHNDI------------------------SGSIPDEVGDLRG 678
Query: 65 LTQLDLSNNNIQGSIPGEITKLSRLDYLNLSSNKLSGPVPFSNNDLSSMHTVVSLSP--- 121
L LDLS+N + G IP ++ L+ L ++LS+N LSGP+P M + P
Sbjct: 679 LNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIP-------EMGQFETFPPAKF 731
Query: 122 --NNGLCGNILDLPSCD 136
N GLCG LP CD
Sbjct: 732 LNNPGLCG--YPLPRCD 746
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 49/112 (43%)
Query: 2 YKIGIIPPEIGNLKNLIKLDVGSNSLIGPIPSAXXXXXXXXXXXXXXXXXXGKIPPEIAS 61
Y G IP +G+L L L + N L G IP G+IP +++
Sbjct: 426 YLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSN 485
Query: 62 MKYLTQLDLSNNNIQGSIPGEITKLSRLDYLNLSSNKLSGPVPFSNNDLSSM 113
L + LSNN + G IP I +L L L LS+N SG +P D S+
Sbjct: 486 CTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSL 537
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 48/100 (48%)
Query: 5 GIIPPEIGNLKNLIKLDVGSNSLIGPIPSAXXXXXXXXXXXXXXXXXXGKIPPEIASMKY 64
G IP E+ +K L L + N L G IPS G+IP I ++
Sbjct: 453 GEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLEN 512
Query: 65 LTQLDLSNNNIQGSIPGEITKLSRLDYLNLSSNKLSGPVP 104
L L LSNN+ G+IP E+ L +L+L++N +G +P
Sbjct: 513 LAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIP 552
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 50/103 (48%), Gaps = 3/103 (2%)
Query: 5 GIIPPEIGNLK-NLIKLDVGSNSLIGPI-PS-AXXXXXXXXXXXXXXXXXXGKIPPEIAS 61
G +P + NL +L+ LD+ SN+ GPI P+ GKIPP +++
Sbjct: 354 GELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSN 413
Query: 62 MKYLTQLDLSNNNIQGSIPGEITKLSRLDYLNLSSNKLSGPVP 104
L L LS N + G+IP + LS+L L L N L G +P
Sbjct: 414 CSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIP 456
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 34/83 (40%)
Query: 5 GIIPPEIGNLKNLIKLDVGSNSLIGPIPSAXXXXXXXXXXXXXXXXXXGKIPPEIASMKY 64
G IP + N NL + + +N L G IP G IP E+ +
Sbjct: 477 GEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRS 536
Query: 65 LTQLDLSNNNIQGSIPGEITKLS 87
L LDL+ N G+IP + K S
Sbjct: 537 LIWLDLNTNLFNGTIPAAMFKQS 559
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 58/125 (46%), Gaps = 3/125 (2%)
Query: 6 IIPPEIGNLKN-LIKLDVGSNSLIGPIPSAXXXXXXXXXXXXXXXXXXGKIPPEIASMKY 64
I+P N KN L +L + +N G IP G IP + S+
Sbjct: 381 ILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSK 440
Query: 65 LTQLDLSNNNIQGSIPGEITKLSRLDYLNLSSNKLSGPVPFSNNDLSSMHTVVSLSPNNG 124
L L L N ++G IP E+ + L+ L L N L+G +P ++ ++++ +SLS NN
Sbjct: 441 LRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLN-WISLS-NNR 498
Query: 125 LCGNI 129
L G I
Sbjct: 499 LTGEI 503
Score = 35.8 bits (81), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 25/48 (52%)
Query: 57 PEIASMKYLTQLDLSNNNIQGSIPGEITKLSRLDYLNLSSNKLSGPVP 104
P + L LD+S N + G I+ + L LN+SSN+ GP+P
Sbjct: 214 PFLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIP 261
Score = 35.0 bits (79), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 53 GKIPPEIASMKYLTQLDLSNNNIQGSIPGEITKLSRLDYLNLSSNKLSGPVPFSNNDLSS 112
G P + + LD+S N + G IP EI + L LNL N +SG +P DL
Sbjct: 619 GHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRG 678
Query: 113 MHTVVSLSPN 122
++ ++ LS N
Sbjct: 679 LN-ILDLSSN 687
Score = 30.4 bits (67), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 42/100 (42%), Gaps = 24/100 (24%)
Query: 5 GIIPPEIGNLKNLIKLDVGSNSLIGPIPSAXXXXXXXXXXXXXXXXXXGKIPPEIASMKY 64
G +PP G+ L L + SN+ G +P + M+
Sbjct: 305 GAVPPFFGSCSLLESLALSSNNFSGELPMDT-----------------------LLKMRG 341
Query: 65 LTQLDLSNNNIQGSIPGEITKLS-RLDYLNLSSNKLSGPV 103
L LDLS N G +P +T LS L L+LSSN SGP+
Sbjct: 342 LKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPI 381
Score = 28.5 bits (62), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Query: 53 GKIPPEIASMKYLTQLDLSNNNIQGSIPGEITKLSRLDYLNLSSNKLSGPVP 104
G I++ L L++S+N G IP L L YL+L+ NK +G +P
Sbjct: 234 GDFSRAISTCTELKLLNISSNQFVGPIP--PLPLKSLQYLSLAENKFTGEIP 283
Score = 28.5 bits (62), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 41/86 (47%), Gaps = 3/86 (3%)
Query: 20 LDVGSNSLIGPIPSAXXXXXXXXXXXXXXXXXXGKIPPEIA-SMKYLTQLDLSNNNIQGS 78
L++ SN +GPIP G+IP ++ + LT LDLS N+ G+
Sbjct: 249 LNISSNQFVGPIPP--LPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGA 306
Query: 79 IPGEITKLSRLDYLNLSSNKLSGPVP 104
+P S L+ L LSSN SG +P
Sbjct: 307 VPPFFGSCSLLESLALSSNNFSGELP 332
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 56/89 (62%), Gaps = 2/89 (2%)
Query: 53 GKIPPEIASMKYLTQLDLSNNNIQGSIPGEITKLSRLDYLNLSSNKLSGPVPFSNNDLSS 112
G IP EI SM YL L+L +N+I GSIP E+ L L+ L+LSSNKL G +P + + L +
Sbjct: 646 GYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSAL-T 704
Query: 113 MHTVVSLSPNNGLCGNILDLPSCDTTKPA 141
M T + LS NN L G I ++ +T PA
Sbjct: 705 MLTEIDLS-NNNLSGPIPEMGQFETFPPA 732
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 63/140 (45%), Gaps = 38/140 (27%)
Query: 5 GIIPPEIGNLKNLIKLDVGSNSLIGPIPSAXXXXXXXXXXXXXXXXXXGKIPPEIASMKY 64
G IP EIG++ L L++G N + G IP E+ ++
Sbjct: 646 GYIPKEIGSMPYLFILNLGHNDI------------------------SGSIPDEVGDLRG 681
Query: 65 LTQLDLSNNNIQGSIPGEITKLSRLDYLNLSSNKLSGPVPFSNNDLSSMHTVVSLSP--- 121
L LDLS+N + G IP ++ L+ L ++LS+N LSGP+P M + P
Sbjct: 682 LNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIP-------EMGQFETFPPAKF 734
Query: 122 --NNGLCGNILDLPSCDTTK 139
N GLCG LP CD +
Sbjct: 735 LNNPGLCG--YPLPRCDPSN 752
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 49/112 (43%)
Query: 2 YKIGIIPPEIGNLKNLIKLDVGSNSLIGPIPSAXXXXXXXXXXXXXXXXXXGKIPPEIAS 61
Y G IP +G+L L L + N L G IP G+IP +++
Sbjct: 429 YLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSN 488
Query: 62 MKYLTQLDLSNNNIQGSIPGEITKLSRLDYLNLSSNKLSGPVPFSNNDLSSM 113
L + LSNN + G IP I +L L L LS+N SG +P D S+
Sbjct: 489 CTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSL 540
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 48/100 (48%)
Query: 5 GIIPPEIGNLKNLIKLDVGSNSLIGPIPSAXXXXXXXXXXXXXXXXXXGKIPPEIASMKY 64
G IP E+ +K L L + N L G IPS G+IP I ++
Sbjct: 456 GEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLEN 515
Query: 65 LTQLDLSNNNIQGSIPGEITKLSRLDYLNLSSNKLSGPVP 104
L L LSNN+ G+IP E+ L +L+L++N +G +P
Sbjct: 516 LAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIP 555
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 50/103 (48%), Gaps = 3/103 (2%)
Query: 5 GIIPPEIGNLK-NLIKLDVGSNSLIGPI-PS-AXXXXXXXXXXXXXXXXXXGKIPPEIAS 61
G +P + NL +L+ LD+ SN+ GPI P+ GKIPP +++
Sbjct: 357 GELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSN 416
Query: 62 MKYLTQLDLSNNNIQGSIPGEITKLSRLDYLNLSSNKLSGPVP 104
L L LS N + G+IP + LS+L L L N L G +P
Sbjct: 417 CSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIP 459
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 34/83 (40%)
Query: 5 GIIPPEIGNLKNLIKLDVGSNSLIGPIPSAXXXXXXXXXXXXXXXXXXGKIPPEIASMKY 64
G IP + N NL + + +N L G IP G IP E+ +
Sbjct: 480 GEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRS 539
Query: 65 LTQLDLSNNNIQGSIPGEITKLS 87
L LDL+ N G+IP + K S
Sbjct: 540 LIWLDLNTNLFNGTIPAAMFKQS 562
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 58/125 (46%), Gaps = 3/125 (2%)
Query: 6 IIPPEIGNLKN-LIKLDVGSNSLIGPIPSAXXXXXXXXXXXXXXXXXXGKIPPEIASMKY 64
I+P N KN L +L + +N G IP G IP + S+
Sbjct: 384 ILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSK 443
Query: 65 LTQLDLSNNNIQGSIPGEITKLSRLDYLNLSSNKLSGPVPFSNNDLSSMHTVVSLSPNNG 124
L L L N ++G IP E+ + L+ L L N L+G +P ++ ++++ +SLS NN
Sbjct: 444 LRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLN-WISLS-NNR 501
Query: 125 LCGNI 129
L G I
Sbjct: 502 LTGEI 506
Score = 35.8 bits (81), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 25/48 (52%)
Query: 57 PEIASMKYLTQLDLSNNNIQGSIPGEITKLSRLDYLNLSSNKLSGPVP 104
P + L LD+S N + G I+ + L LN+SSN+ GP+P
Sbjct: 217 PFLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIP 264
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 53 GKIPPEIASMKYLTQLDLSNNNIQGSIPGEITKLSRLDYLNLSSNKLSGPVPFSNNDLSS 112
G P + + LD+S N + G IP EI + L LNL N +SG +P DL
Sbjct: 622 GHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRG 681
Query: 113 MHTVVSLSPN 122
++ ++ LS N
Sbjct: 682 LN-ILDLSSN 690
Score = 30.4 bits (67), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 42/100 (42%), Gaps = 24/100 (24%)
Query: 5 GIIPPEIGNLKNLIKLDVGSNSLIGPIPSAXXXXXXXXXXXXXXXXXXGKIPPEIASMKY 64
G +PP G+ L L + SN+ G +P + M+
Sbjct: 308 GAVPPFFGSCSLLESLALSSNNFSGELPMDT-----------------------LLKMRG 344
Query: 65 LTQLDLSNNNIQGSIPGEITKLS-RLDYLNLSSNKLSGPV 103
L LDLS N G +P +T LS L L+LSSN SGP+
Sbjct: 345 LKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPI 384
Score = 28.5 bits (62), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Query: 53 GKIPPEIASMKYLTQLDLSNNNIQGSIPGEITKLSRLDYLNLSSNKLSGPVP 104
G I++ L L++S+N G IP L L YL+L+ NK +G +P
Sbjct: 237 GDFSRAISTCTELKLLNISSNQFVGPIP--PLPLKSLQYLSLAENKFTGEIP 286
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 91/194 (46%), Gaps = 20/194 (10%)
Query: 228 NGKVFALKKLHTSEELAFIKSFKNEAQVLSQV-LHRN---------IVKLY-GYCLHKKC 276
NGKV + T E+ A +K ++ + +V LH IV +Y +KC
Sbjct: 35 NGKVLQIFNKRTQEKFA-LKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKC 93
Query: 277 MFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISS 336
+ ++ E ++ G LF + + D + + I+K++ A+ YLH S +I HRD+
Sbjct: 94 LLIVMECLDGGELFSRIQDRGDQAFTE-REASEIMKSIGEAIQYLH---SINIAHRDVKP 149
Query: 337 NNILLNSKLEAFV---ADFGTARLLHADSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYS 393
N+L SK + DFG A+ + +S T Y Y+APE+ + CD++S
Sbjct: 150 ENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWS 208
Query: 394 FGVVTLEVLMGKHP 407
GV+ +L G P
Sbjct: 209 LGVIMYILLCGYPP 222
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 91/194 (46%), Gaps = 20/194 (10%)
Query: 228 NGKVFALKKLHTSEELAFIKSFKNEAQVLSQV-LHRN---------IVKLY-GYCLHKKC 276
NGKV + T E+ A +K ++ + +V LH IV +Y +KC
Sbjct: 36 NGKVLQIFNKRTQEKFA-LKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKC 94
Query: 277 MFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISS 336
+ ++ E ++ G LF + + D + + I+K++ A+ YLH S +I HRD+
Sbjct: 95 LLIVMECLDGGELFSRIQDRGDQAFTE-REASEIMKSIGEAIQYLH---SINIAHRDVKP 150
Query: 337 NNILLNSKLEAFV---ADFGTARLLHADSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYS 393
N+L SK + DFG A+ + +S T Y Y+APE+ + CD++S
Sbjct: 151 ENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWS 209
Query: 394 FGVVTLEVLMGKHP 407
GV+ +L G P
Sbjct: 210 LGVIMYILLCGYPP 223
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 98/205 (47%), Gaps = 19/205 (9%)
Query: 213 IGTGGYGSVYKA--QLPNGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLHRNIVKLY 268
+G+G +G+V K Q+ K+ +E + A EA V+ Q+ + IV++
Sbjct: 25 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 84
Query: 269 GYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPS 328
G C + M L+ E E G L L N + + + +V ++ + YL +
Sbjct: 85 GICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKN---IIELVHQVSMGMKYLEES---N 137
Query: 329 IIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYG-----YIAPELAYTM 383
+HRD+++ N+LL ++ A ++DFG ++ L AD + A T+G + APE
Sbjct: 138 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN--YYKAQTHGKWPVKWYAPECINYY 195
Query: 384 VMTEKCDVYSFGVVTLEVL-MGKHP 407
+ K DV+SFGV+ E G+ P
Sbjct: 196 KFSSKSDVWSFGVLMWEAFSYGQKP 220
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 98/205 (47%), Gaps = 19/205 (9%)
Query: 213 IGTGGYGSVYKA--QLPNGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLHRNIVKLY 268
+G+G +G+V K Q+ K+ +E + A EA V+ Q+ + IV++
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 269 GYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPS 328
G C + M L+ E E G L L N + + + +V ++ + YL +
Sbjct: 79 GICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKN---IIELVHQVSMGMKYLEES---N 131
Query: 329 IIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYG-----YIAPELAYTM 383
+HRD+++ N+LL ++ A ++DFG ++ L AD + A T+G + APE
Sbjct: 132 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN--YYKAQTHGKWPVKWYAPECINYY 189
Query: 384 VMTEKCDVYSFGVVTLEVL-MGKHP 407
+ K DV+SFGV+ E G+ P
Sbjct: 190 KFSSKSDVWSFGVLMWEAFSYGQKP 214
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 91/194 (46%), Gaps = 20/194 (10%)
Query: 228 NGKVFALKKLHTSEELAFIKSFKNEAQVLSQV-LHRN---------IVKLY-GYCLHKKC 276
NGKV + T E+ A +K ++ + +V LH IV +Y +KC
Sbjct: 45 NGKVLQIFNKRTQEKFA-LKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKC 103
Query: 277 MFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISS 336
+ ++ E ++ G LF + + D + + I+K++ A+ YLH S +I HRD+
Sbjct: 104 LLIVMECLDGGELFSRIQDRGDQAFTE-REASEIMKSIGEAIQYLH---SINIAHRDVKP 159
Query: 337 NNILLNSKLEAFV---ADFGTARLLHADSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYS 393
N+L SK + DFG A+ + +S T Y Y+APE+ + CD++S
Sbjct: 160 ENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWS 218
Query: 394 FGVVTLEVLMGKHP 407
GV+ +L G P
Sbjct: 219 LGVIMYILLCGYPP 232
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 98/205 (47%), Gaps = 19/205 (9%)
Query: 213 IGTGGYGSVYKA--QLPNGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLHRNIVKLY 268
+G+G +G+V K Q+ K+ +E + A EA V+ Q+ + IV++
Sbjct: 13 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 72
Query: 269 GYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPS 328
G C + M L+ E E G L L N + + + +V ++ + YL +
Sbjct: 73 GICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKN---IIELVHQVSMGMKYLE---ESN 125
Query: 329 IIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYG-----YIAPELAYTM 383
+HRD+++ N+LL ++ A ++DFG ++ L AD + A T+G + APE
Sbjct: 126 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN--YYKAQTHGKWPVKWYAPECINYY 183
Query: 384 VMTEKCDVYSFGVVTLEVL-MGKHP 407
+ K DV+SFGV+ E G+ P
Sbjct: 184 KFSSKSDVWSFGVLMWEAFSYGQKP 208
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 95/202 (47%), Gaps = 12/202 (5%)
Query: 212 CIGTGGYGSVYKAQ-LPNGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLHRNIVKLY 268
IG G + V A+ + G+ A+K + ++ + K F+ E +++ + H NIVKL+
Sbjct: 19 TIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFR-EVRIMKILNHPNIVKLF 77
Query: 269 GYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPS 328
+K ++LI EY G +F L + E + + + + A+ Y H
Sbjct: 78 EVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKF---RQIVSAVQYCHQ---KR 131
Query: 329 IIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYTMVMTE- 387
I+HRD+ + N+LL++ + +ADFG + T G+ Y APEL
Sbjct: 132 IVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDT-FCGSPPYAAPELFQGKKYDGP 190
Query: 388 KCDVYSFGVVTLEVLMGKHPRD 409
+ DV+S GV+ ++ G P D
Sbjct: 191 EVDVWSLGVILYTLVSGSLPFD 212
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 91/194 (46%), Gaps = 20/194 (10%)
Query: 228 NGKVFALKKLHTSEELAFIKSFKNEAQVLSQV-LHRN---------IVKLY-GYCLHKKC 276
NGKV + T E+ A +K ++ + +V LH IV +Y +KC
Sbjct: 75 NGKVLQIFNKRTQEKFA-LKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKC 133
Query: 277 MFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISS 336
+ ++ E ++ G LF + + D + + I+K++ A+ YLH S +I HRD+
Sbjct: 134 LLIVMECLDGGELFSRIQDRGDQAFTE-REASEIMKSIGEAIQYLH---SINIAHRDVKP 189
Query: 337 NNILLNSKLEAFV---ADFGTARLLHADSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYS 393
N+L SK + DFG A+ + +S T Y Y+APE+ + CD++S
Sbjct: 190 ENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWS 248
Query: 394 FGVVTLEVLMGKHP 407
GV+ +L G P
Sbjct: 249 LGVIMYILLCGYPP 262
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 91/194 (46%), Gaps = 20/194 (10%)
Query: 228 NGKVFALKKLHTSEELAFIKSFKNEAQVLSQV-LHRN---------IVKLY-GYCLHKKC 276
NGKV + T E+ A +K ++ + +V LH IV +Y +KC
Sbjct: 31 NGKVLQIFNKRTQEKFA-LKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKC 89
Query: 277 MFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISS 336
+ ++ E ++ G LF + + D + + I+K++ A+ YLH S +I HRD+
Sbjct: 90 LLIVMECLDGGELFSRIQDRGDQAFTE-REASEIMKSIGEAIQYLH---SINIAHRDVKP 145
Query: 337 NNILLNSKLEAFV---ADFGTARLLHADSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYS 393
N+L SK + DFG A+ + +S T Y Y+APE+ + CD++S
Sbjct: 146 ENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWS 204
Query: 394 FGVVTLEVLMGKHP 407
GV+ +L G P
Sbjct: 205 LGVIMYILLCGYPP 218
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 91/194 (46%), Gaps = 20/194 (10%)
Query: 228 NGKVFALKKLHTSEELAFIKSFKNEAQVLSQV-LHRN---------IVKLY-GYCLHKKC 276
NGKV + T E+ A +K ++ + +V LH IV +Y +KC
Sbjct: 29 NGKVLQIFNKRTQEKFA-LKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKC 87
Query: 277 MFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISS 336
+ ++ E ++ G LF + + D + + I+K++ A+ YLH S +I HRD+
Sbjct: 88 LLIVMECLDGGELFSRIQDRGDQAFTE-REASEIMKSIGEAIQYLH---SINIAHRDVKP 143
Query: 337 NNILLNSKLEAFV---ADFGTARLLHADSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYS 393
N+L SK + DFG A+ + +S T Y Y+APE+ + CD++S
Sbjct: 144 ENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWS 202
Query: 394 FGVVTLEVLMGKHP 407
GV+ +L G P
Sbjct: 203 LGVIMYILLCGYPP 216
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 91/194 (46%), Gaps = 20/194 (10%)
Query: 228 NGKVFALKKLHTSEELAFIKSFKNEAQVLSQV-LHRN---------IVKLY-GYCLHKKC 276
NGKV + T E+ A +K ++ + +V LH IV +Y +KC
Sbjct: 30 NGKVLQIFNKRTQEKFA-LKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKC 88
Query: 277 MFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISS 336
+ ++ E ++ G LF + + D + + I+K++ A+ YLH S +I HRD+
Sbjct: 89 LLIVMECLDGGELFSRIQDRGDQAFTE-REASEIMKSIGEAIQYLH---SINIAHRDVKP 144
Query: 337 NNILLNSKLEAFV---ADFGTARLLHADSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYS 393
N+L SK + DFG A+ + +S T Y Y+APE+ + CD++S
Sbjct: 145 ENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWS 203
Query: 394 FGVVTLEVLMGKHP 407
GV+ +L G P
Sbjct: 204 LGVIMYILLCGYPP 217
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 89/194 (45%), Gaps = 20/194 (10%)
Query: 228 NGKVFALKKLHTSEELAFIKSFKNEAQVLSQV-LHRN---------IVKLY-GYCLHKKC 276
NGKV + T E+ A +K ++ + +V LH IV +Y +KC
Sbjct: 75 NGKVLQIFNKRTQEKFA-LKXLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKC 133
Query: 277 MFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISS 336
+ ++ E ++ G LF + + D + + I K++ A+ YLH S +I HRD+
Sbjct: 134 LLIVXECLDGGELFSRIQDRGDQAFTE-REASEIXKSIGEAIQYLH---SINIAHRDVKP 189
Query: 337 NNILLNSKLEAFV---ADFGTARLLHADSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYS 393
N+L SK + DFG A+ + +S T Y Y+APE+ + CD +S
Sbjct: 190 ENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDXWS 248
Query: 394 FGVVTLEVLMGKHP 407
GV+ +L G P
Sbjct: 249 LGVIXYILLCGYPP 262
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 91/194 (46%), Gaps = 20/194 (10%)
Query: 228 NGKVFALKKLHTSEELAFIKSFKNEAQVLSQV-LHRN---------IVKLY-GYCLHKKC 276
NGKV + T E+ A +K ++ + +V LH IV +Y +KC
Sbjct: 31 NGKVLQIFNKRTQEKFA-LKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKC 89
Query: 277 MFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISS 336
+ ++ E ++ G LF + + D + + I+K++ A+ YLH S +I HRD+
Sbjct: 90 LLIVMECLDGGELFSRIQDRGDQAFTE-REASEIMKSIGEAIQYLH---SINIAHRDVKP 145
Query: 337 NNILLNSKLEAFV---ADFGTARLLHADSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYS 393
N+L SK + DFG A+ + +S T Y Y+APE+ + CD++S
Sbjct: 146 ENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWS 204
Query: 394 FGVVTLEVLMGKHP 407
GV+ +L G P
Sbjct: 205 LGVIMYILLCGYPP 218
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 98/205 (47%), Gaps = 19/205 (9%)
Query: 213 IGTGGYGSVYKA--QLPNGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLHRNIVKLY 268
+G+G +G+V K Q+ K+ +E + A EA V+ Q+ + IV++
Sbjct: 15 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 74
Query: 269 GYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPS 328
G C + M L+ E E G L L N + + + +V ++ + YL +
Sbjct: 75 GICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKN---IIELVHQVSMGMKYLE---ESN 127
Query: 329 IIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYG-----YIAPELAYTM 383
+HRD+++ N+LL ++ A ++DFG ++ L AD + A T+G + APE
Sbjct: 128 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK--AQTHGKWPVKWYAPECINYY 185
Query: 384 VMTEKCDVYSFGVVTLEVL-MGKHP 407
+ K DV+SFGV+ E G+ P
Sbjct: 186 KFSSKSDVWSFGVLMWEAFSYGQKP 210
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 91/194 (46%), Gaps = 20/194 (10%)
Query: 228 NGKVFALKKLHTSEELAFIKSFKNEAQVLSQV-LHRN---------IVKLY-GYCLHKKC 276
NGKV + T E+ A +K ++ + +V LH IV +Y +KC
Sbjct: 81 NGKVLQIFNKRTQEKFA-LKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKC 139
Query: 277 MFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISS 336
+ ++ E ++ G LF + + D + + I+K++ A+ YLH S +I HRD+
Sbjct: 140 LLIVMECLDGGELFSRIQDRGDQAFTE-REASEIMKSIGEAIQYLH---SINIAHRDVKP 195
Query: 337 NNILLNSKLEAFV---ADFGTARLLHADSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYS 393
N+L SK + DFG A+ + +S T Y Y+APE+ + CD++S
Sbjct: 196 ENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWS 254
Query: 394 FGVVTLEVLMGKHP 407
GV+ +L G P
Sbjct: 255 LGVIMYILLCGYPP 268
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 109/228 (47%), Gaps = 29/228 (12%)
Query: 197 YEDLIEATEDFDIRYCIGTGGYGSVYKA-QLPNGKVFALKKLHTSEELAFIKSFKNEAQV 255
+ED+ + T + +G G Y V A L NGK +A+K + + + F+ E +
Sbjct: 10 FEDMYKLTSEL-----LGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFR-EVET 63
Query: 256 LSQVL-HRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAM 314
L Q ++NI++L + +L++E ++ GS+ ++ + E + ++ +V+ +
Sbjct: 64 LYQCQGNKNILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASR---VVRDV 120
Query: 315 AHALAYLHHDCSPSIIHRDISSNNILLNSKLEAF---VADFGTARLLHADSS-------N 364
A AL +LH + I HRD+ NIL S + + DF + ++S
Sbjct: 121 AAALDFLH---TKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPE 177
Query: 365 RTLLAGTYGYIAPELA--YTMVMT---EKCDVYSFGVVTLEVLMGKHP 407
T G+ Y+APE+ +T T ++CD++S GVV +L G P
Sbjct: 178 LTTPCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPP 225
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 93/207 (44%), Gaps = 16/207 (7%)
Query: 209 IRYCIGTGGYGSV-----YKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRN 263
IR +G G +G V YK Q F ++L ++ + E L + H +
Sbjct: 13 IRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHM--RVEREISYLKLLRHPH 70
Query: 264 IVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHH 323
I+KLY + ++ EY G LF + + E D +R + + A+ Y H
Sbjct: 71 IIKLYDVITTPTDIVMVIEYAG-GELFDYIVEKKRMTE-DEGRR--FFQQIICAIEYCHR 126
Query: 324 DCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPE-LAYT 382
I+HRD+ N+LL+ L +ADFG + ++ D + G+ Y APE +
Sbjct: 127 H---KIVHRDLKPENLLLDDNLNVKIADFGLSNIM-TDGNFLKTSCGSPNYAAPEVINGK 182
Query: 383 MVMTEKCDVYSFGVVTLEVLMGKHPRD 409
+ + DV+S G+V +L+G+ P D
Sbjct: 183 LYAGPEVDVWSCGIVLYVMLVGRLPFD 209
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 101/216 (46%), Gaps = 22/216 (10%)
Query: 213 IGTGGYGSVYKAQ-LPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYC 271
+G GG+ V + L +G +ALK++ E+ ++ + EA + H NI++L YC
Sbjct: 37 LGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEA-QREADMHRLFNHPNILRLVAYC 95
Query: 272 LHKKCM----FLIYEYMERGSLFCNLHNNEDAVE-LDWAKRVNIVKAMAHALAYLHHDCS 326
L ++ +L+ + +RG+L+ + +D L + + ++ + L +H +
Sbjct: 96 LRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIH---A 152
Query: 327 PSIIHRDISSNNILLNSKLEAFVADFGTAR--LLHADSSNRTLLAGTYG-------YIAP 377
HRD+ NILL + + + D G+ +H + S + L + Y AP
Sbjct: 153 KGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAP 212
Query: 378 ELAYTM---VMTEKCDVYSFGVVTLEVLMGKHPRDI 410
EL V+ E+ DV+S G V ++ G+ P D+
Sbjct: 213 ELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDM 248
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 97/217 (44%), Gaps = 18/217 (8%)
Query: 202 EATEDF-DIRYCIGTGGYGSVYKA-QLPNGKVFALKKLHTSEELAFIK-----SFKNEAQ 254
+ EDF DI +G+G + V K + G +A K + + A + + E
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 255 VLSQVLHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAM 314
+L QVLH N++ L+ ++ + LI E + G LF L E E + + +K +
Sbjct: 68 ILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSE---EEATSFIKQI 124
Query: 315 AHALAYLHHDCSPSIIHRDISSNNILLNSK----LEAFVADFGTARLLHADSSNRTLLAG 370
+ YLH + I H D+ NI+L K + DFG A + + + G
Sbjct: 125 LDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF-G 180
Query: 371 TYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
T ++APE+ + + D++S GV+T +L G P
Sbjct: 181 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 92/196 (46%), Gaps = 24/196 (12%)
Query: 228 NGKVFALKKLHTSEELAFIKSFKNEAQVLSQV-LHRN---------IVKLY-GYCLHKKC 276
NGKV + T E+ A +K ++ + +V LH IV +Y +KC
Sbjct: 29 NGKVLQIFNKRTQEKFA-LKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKC 87
Query: 277 MFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISS 336
+ ++ E ++ G LF + + D + + I+K++ A+ YLH S +I HRD+
Sbjct: 88 LLIVMECLDGGELFSRIQDRGDQAFTE-REASEIMKSIGEAIQYLH---SINIAHRDVKP 143
Query: 337 NNILLNSKLEAFV---ADFGTARLLHADSSNRTLLAGTYG--YIAPELAYTMVMTEKCDV 391
N+L SK + DFG A+ +S+ +L Y Y+APE+ + CD+
Sbjct: 144 ENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTEPCYTPYYVAPEVLGPEKYDKSCDM 200
Query: 392 YSFGVVTLEVLMGKHP 407
+S GV+ +L G P
Sbjct: 201 WSLGVIMYILLCGYPP 216
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 108/258 (41%), Gaps = 53/258 (20%)
Query: 200 LIEATEDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFI-----KSFKNEAQ 254
L+E + + ++ IG G YG V A + K+ ++ I + K E +
Sbjct: 21 LLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVR 80
Query: 255 VLSQVLHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLH-------------------- 294
++ ++ H NI +LY ++ + L+ E G L L+
Sbjct: 81 LMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQIC 140
Query: 295 ----NNEDAV---------ELDWAKR----VNIVKAMAHALAYLHHDCSPSIIHRDISSN 337
NE+A+ LD+ +R NI++ + AL YLH+ I HRDI
Sbjct: 141 PCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQ---GICHRDIKPE 197
Query: 338 NILL--NSKLEAFVADFGTA----RLLHADSSNRTLLAGTYGYIAPELAYTMVMT--EKC 389
N L N E + DFG + +L + + T AGT ++APE+ T + KC
Sbjct: 198 NFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKC 257
Query: 390 DVYSFGVVTLEVLMGKHP 407
D +S GV+ +LMG P
Sbjct: 258 DAWSAGVLLHLLLMGAVP 275
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 99/208 (47%), Gaps = 12/208 (5%)
Query: 206 DFDIRYCIGTGGYGSVYKAQ-LPNGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLHR 262
++ ++ IG G + V A+ + G+ A+K + ++ + K F+ E +++ + H
Sbjct: 16 NYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFR-EVRIMKILNHP 74
Query: 263 NIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLH 322
NIVKL+ +K ++L+ EY G +F L + E + + + + A+ Y H
Sbjct: 75 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF---RQIVSAVQYCH 131
Query: 323 HDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYT 382
I+HRD+ + N+LL+ + +ADFG + + T G+ Y APEL
Sbjct: 132 QKY---IVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDT-FCGSPPYAAPELFQG 187
Query: 383 MVMTE-KCDVYSFGVVTLEVLMGKHPRD 409
+ DV+S GV+ ++ G P D
Sbjct: 188 KKYDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 97/217 (44%), Gaps = 18/217 (8%)
Query: 202 EATEDF-DIRYCIGTGGYGSVYKA-QLPNGKVFALKKLHTSEELAFIK-----SFKNEAQ 254
+ EDF DI +G+G + V K + G +A K + + A + + E
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 255 VLSQVLHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAM 314
+L QVLH N++ L+ ++ + LI E + G LF L E E + + +K +
Sbjct: 68 ILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSE---EEATSFIKQI 124
Query: 315 AHALAYLHHDCSPSIIHRDISSNNILLNSK----LEAFVADFGTARLLHADSSNRTLLAG 370
+ YLH + I H D+ NI+L K + DFG A + + + G
Sbjct: 125 LDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF-G 180
Query: 371 TYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
T ++APE+ + + D++S GV+T +L G P
Sbjct: 181 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 95/200 (47%), Gaps = 13/200 (6%)
Query: 213 IGTGGYGSVYKAQ-LPNGKVFALKKLHTSEELAFIKSFK-NEAQVLSQVLHRNIVKLYGY 270
IG G YG+V+KA+ ++ ALK++ ++ + S E +L ++ H+NIV+L+
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 271 CLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRV--NIVKAMAHALAYLHHDCSPS 328
K + L++E+ ++ +L D+ D + + + + L + H S +
Sbjct: 70 LHSDKKLTLVFEFCDQ-----DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCH---SRN 121
Query: 329 IIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAY-TMVMTE 387
++HRD+ N+L+N E +ADFG AR + T Y P++ + + +
Sbjct: 122 VLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYST 181
Query: 388 KCDVYSFGVVTLEVLMGKHP 407
D++S G + E+ P
Sbjct: 182 SIDMWSAGCIFAELANAARP 201
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 95/201 (47%), Gaps = 10/201 (4%)
Query: 212 CIGTGGYGSVYKAQ-LPNGKVFALKKLHTSE-ELAFIKSFKNEAQVLSQVLHRNIVKLYG 269
IG G + V A+ + GK A+K + ++ + ++ E +++ + H NIVKL+
Sbjct: 21 TIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFE 80
Query: 270 YCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSI 329
+K ++L+ EY G +F L + E + + + + A+ Y H I
Sbjct: 81 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF---RQIVSAVQYCHQKF---I 134
Query: 330 IHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYTMVMTE-K 388
+HRD+ + N+LL++ + +ADFG + + T G+ Y APEL +
Sbjct: 135 VHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT-FCGSPPYAAPELFQGKKYDGPE 193
Query: 389 CDVYSFGVVTLEVLMGKHPRD 409
DV+S GV+ ++ G P D
Sbjct: 194 VDVWSLGVILYTLVSGSLPFD 214
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 97/217 (44%), Gaps = 18/217 (8%)
Query: 202 EATEDF-DIRYCIGTGGYGSVYKA-QLPNGKVFALKKLHTSEELAFIK-----SFKNEAQ 254
+ EDF DI +G+G + V K + G +A K + + A + + E
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 255 VLSQVLHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAM 314
+L QVLH N++ L+ ++ + LI E + G LF L E E + + +K +
Sbjct: 68 ILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSE---EEATSFIKQI 124
Query: 315 AHALAYLHHDCSPSIIHRDISSNNILLNSK----LEAFVADFGTARLLHADSSNRTLLAG 370
+ YLH + I H D+ NI+L K + DFG A + + + G
Sbjct: 125 LDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF-G 180
Query: 371 TYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
T ++APE+ + + D++S GV+T +L G P
Sbjct: 181 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 95/201 (47%), Gaps = 10/201 (4%)
Query: 212 CIGTGGYGSVYKAQ-LPNGKVFALKKLHTSE-ELAFIKSFKNEAQVLSQVLHRNIVKLYG 269
IG G + V A+ + GK A+K + ++ + ++ E +++ + H NIVKL+
Sbjct: 21 TIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFE 80
Query: 270 YCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSI 329
+K ++L+ EY G +F L + E + + + + A+ Y H I
Sbjct: 81 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF---RQIVSAVQYCHQKF---I 134
Query: 330 IHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYTMVMTE-K 388
+HRD+ + N+LL++ + +ADFG + + T G+ Y APEL +
Sbjct: 135 VHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT-FCGSPPYAAPELFQGKKYDGPE 193
Query: 389 CDVYSFGVVTLEVLMGKHPRD 409
DV+S GV+ ++ G P D
Sbjct: 194 VDVWSLGVILYTLVSGSLPFD 214
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 118/286 (41%), Gaps = 44/286 (15%)
Query: 213 IGTGGYGSVYKA------QLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVL-HRNIV 265
+G G +G V +A + A+K L S L ++ +E +VLS + H NIV
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 113
Query: 266 KLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAV---------------ELDWAKRVNI 310
L G C +I EY G L L D+ LD ++
Sbjct: 114 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 173
Query: 311 VKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAG 370
+A +A+L S + IHRD+++ NILL + DFG AR + DS+ ++ G
Sbjct: 174 SYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSN--YVVKG 228
Query: 371 T----YGYIAPELAYTMVMTEKCDVYSFGVVTLEVL-MGKHPRDIXXXXXXXXDPKIM-L 424
++APE + V T + DV+S+G+ E+ +G P D K +
Sbjct: 229 NARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP-----YPGMPVDSKFYKM 283
Query: 425 IDVLDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQ 470
I + L P + DI+ C ++P RPT + + Q
Sbjct: 284 IKEGFRMLSPEHAPAEMYDIMK------TCWDADPLKRPTFKQIVQ 323
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 97/217 (44%), Gaps = 18/217 (8%)
Query: 202 EATEDF-DIRYCIGTGGYGSVYKA-QLPNGKVFALKKLHTSEELAFIK-----SFKNEAQ 254
+ EDF DI +G+G + V K + G +A K + + A + + E
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 255 VLSQVLHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAM 314
+L QVLH N++ L+ ++ + LI E + G LF L E E + + +K +
Sbjct: 68 ILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSE---EEATSFIKQI 124
Query: 315 AHALAYLHHDCSPSIIHRDISSNNILLNSK----LEAFVADFGTARLLHADSSNRTLLAG 370
+ YLH + I H D+ NI+L K + DFG A + + + G
Sbjct: 125 LDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF-G 180
Query: 371 TYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
T ++APE+ + + D++S GV+T +L G P
Sbjct: 181 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 100/226 (44%), Gaps = 20/226 (8%)
Query: 192 DGRIVYEDLIEATEDFDIRYCIGTGGYGSVYKA-QLPNGKVFALK-----KLHTSEELAF 245
D +++ED+ E E IG G + V + G+ FA+K K +S L+
Sbjct: 17 DDDVLFEDVYELCE------VIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLS- 69
Query: 246 IKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDA-VELDW 304
+ K EA + + H +IV+L +++++E+M+ L + DA
Sbjct: 70 TEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSE 129
Query: 305 AKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAF---VADFGTARLLHAD 361
A + ++ + AL Y H + +IIHRD+ N+LL SK + + DFG A L
Sbjct: 130 AVASHYMRQILEALRYCHDN---NIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGES 186
Query: 362 SSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
GT ++APE+ + DV+ GV+ +L G P
Sbjct: 187 GLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLP 232
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 118/286 (41%), Gaps = 44/286 (15%)
Query: 213 IGTGGYGSVYKA------QLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVL-HRNIV 265
+G G +G V +A + A+K L S L ++ +E +VLS + H NIV
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 113
Query: 266 KLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAV---------------ELDWAKRVNI 310
L G C +I EY G L L D+ LD ++
Sbjct: 114 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 173
Query: 311 VKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAG 370
+A +A+L S + IHRD+++ NILL + DFG AR + DS+ ++ G
Sbjct: 174 SYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSN--YVVKG 228
Query: 371 T----YGYIAPELAYTMVMTEKCDVYSFGVVTLEVL-MGKHPRDIXXXXXXXXDPKIM-L 424
++APE + V T + DV+S+G+ E+ +G P D K +
Sbjct: 229 NARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP-----YPGMPVDSKFYKM 283
Query: 425 IDVLDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQ 470
I + L P + DI+ C ++P RPT + + Q
Sbjct: 284 IKEGFRMLSPEHAPAEMYDIMK------TCWDADPLKRPTFKQIVQ 323
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 97/217 (44%), Gaps = 18/217 (8%)
Query: 202 EATEDF-DIRYCIGTGGYGSVYKA-QLPNGKVFALKKLHTSEELAFIK-----SFKNEAQ 254
+ EDF DI +G+G + V K + G +A K + + A + + E
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 255 VLSQVLHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAM 314
+L QVLH N++ L+ ++ + LI E + G LF L E E + + +K +
Sbjct: 68 ILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSE---EEATSFIKQI 124
Query: 315 AHALAYLHHDCSPSIIHRDISSNNILLNSK----LEAFVADFGTARLLHADSSNRTLLAG 370
+ YLH + I H D+ NI+L K + DFG A + + + G
Sbjct: 125 LDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF-G 180
Query: 371 TYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
T ++APE+ + + D++S GV+T +L G P
Sbjct: 181 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 118/286 (41%), Gaps = 44/286 (15%)
Query: 213 IGTGGYGSVYKA------QLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVL-HRNIV 265
+G G +G V +A + A+K L S L ++ +E +VLS + H NIV
Sbjct: 47 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 106
Query: 266 KLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAV---------------ELDWAKRVNI 310
L G C +I EY G L L D+ LD ++
Sbjct: 107 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 166
Query: 311 VKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAG 370
+A +A+L S + IHRD+++ NILL + DFG AR + DS+ ++ G
Sbjct: 167 SYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSN--YVVKG 221
Query: 371 T----YGYIAPELAYTMVMTEKCDVYSFGVVTLEVL-MGKHPRDIXXXXXXXXDPKIM-L 424
++APE + V T + DV+S+G+ E+ +G P D K +
Sbjct: 222 NARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP-----YPGMPVDSKFYKM 276
Query: 425 IDVLDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQ 470
I + L P + DI+ C ++P RPT + + Q
Sbjct: 277 IKEGFRMLSPEHAPAEMYDIMK------TCWDADPLKRPTFKQIVQ 316
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 118/286 (41%), Gaps = 44/286 (15%)
Query: 213 IGTGGYGSVYKA------QLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVL-HRNIV 265
+G G +G V +A + A+K L S L ++ +E +VLS + H NIV
Sbjct: 31 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 90
Query: 266 KLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAV---------------ELDWAKRVNI 310
L G C +I EY G L L D+ LD ++
Sbjct: 91 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 150
Query: 311 VKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAG 370
+A +A+L S + IHRD+++ NILL + DFG AR + DS+ ++ G
Sbjct: 151 SYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSN--YVVKG 205
Query: 371 T----YGYIAPELAYTMVMTEKCDVYSFGVVTLEVL-MGKHPRDIXXXXXXXXDPKIM-L 424
++APE + V T + DV+S+G+ E+ +G P D K +
Sbjct: 206 NARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP-----YPGMPVDSKFYKM 260
Query: 425 IDVLDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQ 470
I + L P + DI+ C ++P RPT + + Q
Sbjct: 261 IKEGFRMLSPEHAPAEMYDIMK------TCWDADPLKRPTFKQIVQ 300
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 109/269 (40%), Gaps = 30/269 (11%)
Query: 213 IGTGGYGSVYKAQLPN---GKV---FALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVK 266
+G G +G VY+ + G+ A+K ++ S L F NEA V+ ++V+
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 85
Query: 267 LYGYCLHKKCMFLIYEYMERGSLFCNL-------HNNEDAVELDWAKRVNIVKAMAHALA 319
L G + ++ E M G L L NN + + + +A +A
Sbjct: 86 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 145
Query: 320 YLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAG--TYGYIAP 377
YL+ + +HR++++ N ++ + DFG R ++ R G ++AP
Sbjct: 146 YLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 202
Query: 378 ELAYTMVMTEKCDVYSFGVVTLEVL-MGKHPRDIXXXXXXXXDPKIMLIDVLDQRLPPPV 436
E V T D++SFGVV E+ + + P +M LDQ P
Sbjct: 203 ESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLK--FVMDGGYLDQ---PDN 257
Query: 437 DRKVIRDILLISTVSFACLQSNPKSRPTM 465
+ + D++ + C Q NP RPT
Sbjct: 258 CPERVTDLMRM------CWQFNPNMRPTF 280
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 68/139 (48%), Gaps = 13/139 (9%)
Query: 274 KKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRD 333
K+C+ +I E ME G LF + D + + I++ + A+ +LH S +I HRD
Sbjct: 79 KRCLLIIMECMEGGELFSRIQERGDQAFTE-REAAEIMRDIGTAIQFLH---SHNIAHRD 134
Query: 334 ISSNNILLNSKLEAFV---ADFGTARLLHADSSNRTLLAGTYG--YIAPELAYTMVMTEK 388
+ N+L SK + V DFG A+ +++ L Y Y+APE+ +
Sbjct: 135 VKPENLLYTSKEKDAVLKLTDFGFAK----ETTQNALQTPCYTPYYVAPEVLGPEKYDKS 190
Query: 389 CDVYSFGVVTLEVLMGKHP 407
CD++S GV+ +L G P
Sbjct: 191 CDMWSLGVIMYILLCGFPP 209
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 98/212 (46%), Gaps = 30/212 (14%)
Query: 213 IGTGGYGSVYK-AQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQ--VLHRN-----I 264
IG G YGSV K P+G++ A+K++ ++ + K + Q+L V+ R+ I
Sbjct: 30 IGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDE------KEQKQLLMDLDVVMRSSDCPYI 83
Query: 265 VKLYGYCLHKKCMFLIYEYMERGSLFCNLHNN-----EDAVELDWAKRVNIVKAMAHALA 319
V+ YG + ++ E M + F + +D + + ++ + A AL
Sbjct: 84 VQFYGALFREGDCWICMELM--STSFDKFYKYVYSVLDDVIPEEILGKITL--ATVKALN 139
Query: 320 YLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPEL 379
+L + IIHRDI +NILL+ + DFG + L DS +T AG Y+APE
Sbjct: 140 HLKENLK--IIHRDIKPSNILLDRSGNIKLCDFGISGQL-VDSIAKTRDAGCRPYMAPER 196
Query: 380 ----AYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
A + DV+S G+ E+ G+ P
Sbjct: 197 IDPSASRQGYDVRSDVWSLGITLYELATGRFP 228
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 68/139 (48%), Gaps = 13/139 (9%)
Query: 274 KKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRD 333
K+C+ +I E ME G LF + D + + I++ + A+ +LH S +I HRD
Sbjct: 98 KRCLLIIMECMEGGELFSRIQERGDQAFTE-REAAEIMRDIGTAIQFLH---SHNIAHRD 153
Query: 334 ISSNNILLNSKLEAFV---ADFGTARLLHADSSNRTLLAGTYG--YIAPELAYTMVMTEK 388
+ N+L SK + V DFG A+ +++ L Y Y+APE+ +
Sbjct: 154 VKPENLLYTSKEKDAVLKLTDFGFAK----ETTQNALQTPCYTPYYVAPEVLGPEKYDKS 209
Query: 389 CDVYSFGVVTLEVLMGKHP 407
CD++S GV+ +L G P
Sbjct: 210 CDMWSLGVIMYILLCGFPP 228
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 90/207 (43%), Gaps = 24/207 (11%)
Query: 213 IGTGGYGSVYKAQLPNGKVFALK------KLHTSEELAFIKSFKNEAQVLSQVLHRNIVK 266
+G G +GSV + L +LK KL S + I+ F +EA + H N+++
Sbjct: 42 LGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQRE-IEEFLSEAACMKDFSHPNVIR 100
Query: 267 LYGYCLHKKCM-----FLIYEYMERGSL-----FCNLHNNEDAVELDWAKRVNIVKAMAH 316
L G C+ +I +M+ G L + L + L ++K M
Sbjct: 101 LLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQ-----TLLKFMVD 155
Query: 317 ALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRT--LLAGTYGY 374
+ + + + +HRD+++ N +L + VADFG ++ +++ R + +
Sbjct: 156 IALGMEYLSNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKW 215
Query: 375 IAPELAYTMVMTEKCDVYSFGVVTLEV 401
IA E V T K DV++FGV E+
Sbjct: 216 IAIESLADRVYTSKSDVWAFGVTMWEI 242
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 109/269 (40%), Gaps = 30/269 (11%)
Query: 213 IGTGGYGSVYKAQLPN---GKV---FALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVK 266
+G G +G VY+ + G+ A+K ++ S L F NEA V+ ++V+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 267 LYGYCLHKKCMFLIYEYMERGSLFCNL-------HNNEDAVELDWAKRVNIVKAMAHALA 319
L G + ++ E M G L L NN + + + +A +A
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 320 YLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAG--TYGYIAP 377
YL+ + +HR++++ N ++ + DFG R ++ R G ++AP
Sbjct: 145 YLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 201
Query: 378 ELAYTMVMTEKCDVYSFGVVTLEVL-MGKHPRDIXXXXXXXXDPKIMLIDVLDQRLPPPV 436
E V T D++SFGVV E+ + + P +M LDQ P
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLK--FVMDGGYLDQ---PDN 256
Query: 437 DRKVIRDILLISTVSFACLQSNPKSRPTM 465
+ + D++ + C Q NP RPT
Sbjct: 257 CPERVTDLMRM------CWQFNPNMRPTF 279
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 118/286 (41%), Gaps = 44/286 (15%)
Query: 213 IGTGGYGSVYKA------QLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVL-HRNIV 265
+G G +G V +A + A+K L S L ++ +E +VLS + H NIV
Sbjct: 49 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 108
Query: 266 KLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAV---------------ELDWAKRVNI 310
L G C +I EY G L L D+ LD ++
Sbjct: 109 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 168
Query: 311 VKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAG 370
+A +A+L S + IHRD+++ NILL + DFG AR + DS+ ++ G
Sbjct: 169 SYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSN--YVVKG 223
Query: 371 T----YGYIAPELAYTMVMTEKCDVYSFGVVTLEVL-MGKHPRDIXXXXXXXXDPKIM-L 424
++APE + V T + DV+S+G+ E+ +G P D K +
Sbjct: 224 NARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP-----YPGMPVDSKFYKM 278
Query: 425 IDVLDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQ 470
I + L P + DI+ C ++P RPT + + Q
Sbjct: 279 IKEGFRMLSPEHAPAEMYDIMK------TCWDADPLKRPTFKQIVQ 318
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 97/217 (44%), Gaps = 18/217 (8%)
Query: 202 EATEDF-DIRYCIGTGGYGSVYKA-QLPNGKVFALKKLHTSEELAFIK-----SFKNEAQ 254
+ EDF DI +G+G + V K + G +A K + + A + + E
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVS 67
Query: 255 VLSQVLHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAM 314
+L QVLH NI+ L+ ++ + LI E + G LF L E E + + +K +
Sbjct: 68 ILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSE---EEATSFIKQI 124
Query: 315 AHALAYLHHDCSPSIIHRDISSNNILLNSK----LEAFVADFGTARLLHADSSNRTLLAG 370
+ YLH + I H D+ NI+L K + DFG A + + + G
Sbjct: 125 LDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF-G 180
Query: 371 TYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
T ++APE+ + + D++S GV+T +L G P
Sbjct: 181 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 97/213 (45%), Gaps = 26/213 (12%)
Query: 205 EDFDIRYCIGTGGYGSVYKAQ-LPNGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLH 261
+ F+ IGTG +G V + + G +A+K L + +L I+ NE ++L V
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 262 RNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHA---- 317
+VKL ++++ EYM G +F +L R + A +A
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRR---------IGRFSEPHARFYAAQIV 151
Query: 318 --LAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTL-LAGTYGY 374
YLH S +I+RD+ N+L++ + VADFG A+ + RT L GT Y
Sbjct: 152 LTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRV----KGRTWXLCGTPEY 204
Query: 375 IAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
+APE+ + + D ++ GV+ E+ G P
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 97/213 (45%), Gaps = 26/213 (12%)
Query: 205 EDFDIRYCIGTGGYGSVYKAQ-LPNGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLH 261
+ F+ IGTG +G V + + G +A+K L + +L I+ NE ++L V
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 262 RNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHA---- 317
+VKL ++++ EYM G +F +L R + A +A
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRR---------IGRFSEPHARFYAAQIV 151
Query: 318 --LAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTL-LAGTYGY 374
YLH S +I+RD+ N+L++ + VADFG A+ + RT L GT Y
Sbjct: 152 LTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRV----KGRTWXLCGTPEY 204
Query: 375 IAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
+APE+ + + D ++ GV+ E+ G P
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 94/198 (47%), Gaps = 10/198 (5%)
Query: 213 IGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCL 272
+G G +G V+K + + K+ + + + KNE V++Q+ H N+++LY
Sbjct: 97 LGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFE 156
Query: 273 HKKCMFLIYEYMERGSLFCNLHNNE-DAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIH 331
K + L+ EY++ G LF + + + ELD + +K + + ++H I+H
Sbjct: 157 SKNDIVLVMEYVDGGELFDRIIDESYNLTELD---TILFMKQICEGIRHMHQ---MYILH 210
Query: 332 RDISSNNIL-LNSKLEAF-VADFGTARLLHADSSNRTLLAGTYGYIAPELAYTMVMTEKC 389
D+ NIL +N + + DFG AR + GT ++APE+ ++
Sbjct: 211 LDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNF-GTPEFLAPEVVNYDFVSFPT 269
Query: 390 DVYSFGVVTLEVLMGKHP 407
D++S GV+ +L G P
Sbjct: 270 DMWSVGVIAYMLLSGLSP 287
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 80/171 (46%), Gaps = 25/171 (14%)
Query: 250 KNEAQVLSQVLHRNIVKLYG--YCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKR 307
K E Q+L ++ H+N+++L Y K+ M+++ EY C + D+V KR
Sbjct: 54 KKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEY-----CVCGMQEMLDSVP---EKR 105
Query: 308 VNIVKAMAH------ALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLH-- 359
+ +A + L YLH S I+H+DI N+LL + ++ G A LH
Sbjct: 106 FPVCQAHGYFCQLIDGLEYLH---SQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPF 162
Query: 360 -ADSSNRTLLAGTYGYIAPELAYTMVMTE--KCDVYSFGVVTLEVLMGKHP 407
AD + RT G+ + PE+A + K D++S GV + G +P
Sbjct: 163 AADDTCRT-SQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYP 212
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 95/201 (47%), Gaps = 10/201 (4%)
Query: 212 CIGTGGYGSVYKAQ-LPNGKVFALKKLHTSE-ELAFIKSFKNEAQVLSQVLHRNIVKLYG 269
IG G + V A+ + GK A++ + ++ + ++ E +++ + H NIVKL+
Sbjct: 21 TIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFE 80
Query: 270 YCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSI 329
+K ++L+ EY G +F L + E + + + + A+ Y H I
Sbjct: 81 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF---RQIVSAVQYCHQKF---I 134
Query: 330 IHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYTMVMTE-K 388
+HRD+ + N+LL++ + +ADFG + + T G+ Y APEL +
Sbjct: 135 VHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT-FCGSPPYAAPELFQGKKYDGPE 193
Query: 389 CDVYSFGVVTLEVLMGKHPRD 409
DV+S GV+ ++ G P D
Sbjct: 194 VDVWSLGVILYTLVSGSLPFD 214
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 93/201 (46%), Gaps = 12/201 (5%)
Query: 213 IGTGGYGSVYKAQ-LPNGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLHRNIVKLYG 269
IG G + V A+ + G+ A+K + ++ + K F+ E +++ + H NIVKL+
Sbjct: 23 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFR-EVRIMKILNHPNIVKLFE 81
Query: 270 YCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSI 329
+K ++LI EY G +F L + E + + + + A+ Y H I
Sbjct: 82 VIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKF---RQIVSAVQYCHQ---KRI 135
Query: 330 IHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYTMVMTE-K 388
+HRD+ + N+LL++ + +ADFG + G Y APEL +
Sbjct: 136 VHRDLKAENLLLDADMNIKIADFGFSNEFTV-GGKLDAFCGAPPYAAPELFQGKKYDGPE 194
Query: 389 CDVYSFGVVTLEVLMGKHPRD 409
DV+S GV+ ++ G P D
Sbjct: 195 VDVWSLGVILYTLVSGSLPFD 215
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 88/197 (44%), Gaps = 10/197 (5%)
Query: 213 IGTGGYGSVYKA-QLPNGKVFALKKLHTS-EELAFIKSFKNEAQVLSQVLHRNIVKLYGY 270
+G+G YGSV A G A+KKL + + K E ++L + H N++ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 271 CLHKKCMFLIYE-YMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSI 329
+ + + Y+ + +L+N +L ++ + L Y+H S I
Sbjct: 86 FTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQFLIYQILRGLKYIH---SADI 142
Query: 330 IHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYT-MVMTEK 388
IHRD+ +N+ +N E + DFG AR H D T T Y APE+ M +
Sbjct: 143 IHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE-MTGYVATRWYRAPEIMLNWMHYNQT 199
Query: 389 CDVYSFGVVTLEVLMGK 405
D++S G + E+L G+
Sbjct: 200 VDIWSVGCIMAELLTGR 216
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 89/197 (45%), Gaps = 10/197 (5%)
Query: 213 IGTGGYGSVYKA-QLPNGKVFALKKLHTS-EELAFIKSFKNEAQVLSQVLHRNIVKLYGY 270
+G+G YGSV A G A+KKL + + K E ++L + H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 271 CLHKKCMFLIYE-YMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSI 329
+ + + Y+ + +L+N +L ++ + L Y+H S I
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADI 146
Query: 330 IHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYT-MVMTEK 388
IHRD+ +N+ +N E + DFG AR H D +A T Y APE+ M +
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMAGFVA-TRWYRAPEIMLNWMHYNQT 203
Query: 389 CDVYSFGVVTLEVLMGK 405
D++S G + E+L G+
Sbjct: 204 VDIWSVGCIMAELLTGR 220
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 116/273 (42%), Gaps = 34/273 (12%)
Query: 213 IGTGGYGSVYKA----QLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLY 268
IG G +G VY Q N A+K L E+ +++F E ++ + H N++ L
Sbjct: 29 IGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALI 88
Query: 269 GYCLHKKCM-FLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSP 327
G L + + ++ YM G L + + + + ++ +A + YL
Sbjct: 89 GIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTV--KDLISFGLQVARGMEYL---AEQ 143
Query: 328 SIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYG-----YIAPELAYT 382
+HRD+++ N +L+ VADFG AR + D ++ + + A E T
Sbjct: 144 KFVHRDLAARNCMLDESFTVKVADFGLARDI-LDREYYSVQQHRHARLPVKWTALESLQT 202
Query: 383 MVMTEKCDVYSFGVVTLEVLMGKHP--RDIXXXXXXXXDPKIMLIDVLDQ--RLPPPVDR 438
T K DV+SFGV+ E+L P R I DP L L Q RLP P
Sbjct: 203 YRFTTKSDVWSFGVLLWELLTRGAPPYRHI--------DP-FDLTHFLAQGRRLPQP--- 250
Query: 439 KVIRDILLISTVSFACLQSNPKSRPTMQSVSQE 471
+ D L V C +++P RPT + + E
Sbjct: 251 EYCPDSLY--QVMQQCWEADPAVRPTFRVLVGE 281
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 89/197 (45%), Gaps = 10/197 (5%)
Query: 213 IGTGGYGSVYKA-QLPNGKVFALKKLHTS-EELAFIKSFKNEAQVLSQVLHRNIVKLYGY 270
+G+G YGSV A G A+KKL + + K E ++L + H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 271 CLHKKCMFLIYE-YMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSI 329
+ + + Y+ + +L+N +L ++ + L Y+H S I
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADI 146
Query: 330 IHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYT-MVMTEK 388
IHRD+ +N+ +N E + DFG AR H D +A T Y APE+ M +
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMAGFVA-TRWYRAPEIMLNWMHYNQT 203
Query: 389 CDVYSFGVVTLEVLMGK 405
D++S G + E+L G+
Sbjct: 204 VDIWSVGCIMAELLTGR 220
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 79/164 (48%), Gaps = 14/164 (8%)
Query: 250 KNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVN 309
+ E ++L ++ H I+K+ + + +++ E ME G LF + N+ L A
Sbjct: 63 ETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNK---RLKEATCKL 118
Query: 310 IVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAF---VADFGTARLLHADSSNRT 366
M A+ YLH + IIHRD+ N+LL+S+ E + DFG +++L S RT
Sbjct: 119 YFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT 175
Query: 367 LLAGTYGYIAPEL---AYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
L GT Y+APE+ T D +S GV+ L G P
Sbjct: 176 -LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 218
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 79/164 (48%), Gaps = 14/164 (8%)
Query: 250 KNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVN 309
+ E ++L ++ H I+K+ + + +++ E ME G LF + N+ L A
Sbjct: 62 ETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNK---RLKEATCKL 117
Query: 310 IVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAF---VADFGTARLLHADSSNRT 366
M A+ YLH + IIHRD+ N+LL+S+ E + DFG +++L S RT
Sbjct: 118 YFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT 174
Query: 367 LLAGTYGYIAPEL---AYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
L GT Y+APE+ T D +S GV+ L G P
Sbjct: 175 -LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 217
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 89/197 (45%), Gaps = 10/197 (5%)
Query: 213 IGTGGYGSVYKA-QLPNGKVFALKKLHTS-EELAFIKSFKNEAQVLSQVLHRNIVKLYGY 270
+G+G YGSV A G A+KKL + + K E ++L + H N++ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 271 CLHKKCMFLIYE-YMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSI 329
+ + + Y+ + +L+N +L ++ + L Y+H S I
Sbjct: 86 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADI 142
Query: 330 IHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYT-MVMTEK 388
IHRD+ +N+ +N E + DFG AR H D +A T Y APE+ M +
Sbjct: 143 IHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMAGFVA-TRWYRAPEIMLNWMHYNQT 199
Query: 389 CDVYSFGVVTLEVLMGK 405
D++S G + E+L G+
Sbjct: 200 VDIWSVGCIMAELLTGR 216
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 79/164 (48%), Gaps = 14/164 (8%)
Query: 250 KNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVN 309
+ E ++L ++ H I+K+ + + +++ E ME G LF + N+ L A
Sbjct: 69 ETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNK---RLKEATCKL 124
Query: 310 IVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAF---VADFGTARLLHADSSNRT 366
M A+ YLH + IIHRD+ N+LL+S+ E + DFG +++L S RT
Sbjct: 125 YFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT 181
Query: 367 LLAGTYGYIAPEL---AYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
L GT Y+APE+ T D +S GV+ L G P
Sbjct: 182 -LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 224
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 79/164 (48%), Gaps = 14/164 (8%)
Query: 250 KNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVN 309
+ E ++L ++ H I+K+ + + +++ E ME G LF + N+ L A
Sbjct: 63 ETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNK---RLKEATCKL 118
Query: 310 IVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAF---VADFGTARLLHADSSNRT 366
M A+ YLH + IIHRD+ N+LL+S+ E + DFG +++L S RT
Sbjct: 119 YFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT 175
Query: 367 LLAGTYGYIAPEL---AYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
L GT Y+APE+ T D +S GV+ L G P
Sbjct: 176 -LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 218
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 79/164 (48%), Gaps = 14/164 (8%)
Query: 250 KNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVN 309
+ E ++L ++ H I+K+ + + +++ E ME G LF + N+ L A
Sbjct: 63 ETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNK---RLKEATCKL 118
Query: 310 IVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAF---VADFGTARLLHADSSNRT 366
M A+ YLH + IIHRD+ N+LL+S+ E + DFG +++L S RT
Sbjct: 119 YFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT 175
Query: 367 LLAGTYGYIAPEL---AYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
L GT Y+APE+ T D +S GV+ L G P
Sbjct: 176 -LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 218
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 89/197 (45%), Gaps = 10/197 (5%)
Query: 213 IGTGGYGSVYKA-QLPNGKVFALKKLHTS-EELAFIKSFKNEAQVLSQVLHRNIVKLYGY 270
+G+G YGSV A G A+KKL + + K E ++L + H N++ L
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 271 CLHKKCMFLIYE-YMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSI 329
+ + + Y+ + +L+N +L ++ + L Y+H S I
Sbjct: 110 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADI 166
Query: 330 IHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYT-MVMTEK 388
IHRD+ +N+ +N E + DFG AR H D +A T Y APE+ M +
Sbjct: 167 IHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMXGXVA-TRWYRAPEIMLNWMHYNQT 223
Query: 389 CDVYSFGVVTLEVLMGK 405
D++S G + E+L G+
Sbjct: 224 VDIWSVGCIMAELLTGR 240
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 95/213 (44%), Gaps = 23/213 (10%)
Query: 206 DFDIRYCIGTGGYGSVYKAQLPN-GKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNI 264
DF + IG GG+G VY + + GK++A+K L IK + E L++ + ++
Sbjct: 190 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKR----IKMKQGETLALNERIMLSL 245
Query: 265 VKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAY---- 320
V G C CM + ++ S +L N D L + + V + A Y
Sbjct: 246 VST-GDCPFIVCMSYAFHTPDKLSFILDLMNGGD---LHYHLSQHGVFSEADMRFYAAEI 301
Query: 321 ---LHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLA--GTYGYI 375
L H + +++RD+ NILL+ ++D G A D S + A GT+GY+
Sbjct: 302 ILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLA----CDFSKKKPHASVGTHGYM 357
Query: 376 APE-LAYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
APE L + D +S G + ++L G P
Sbjct: 358 APEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 95/213 (44%), Gaps = 23/213 (10%)
Query: 206 DFDIRYCIGTGGYGSVYKAQLPN-GKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNI 264
DF + IG GG+G VY + + GK++A+K L IK + E L++ + ++
Sbjct: 190 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKR----IKMKQGETLALNERIMLSL 245
Query: 265 VKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAY---- 320
V G C CM + ++ S +L N D L + + V + A Y
Sbjct: 246 VST-GDCPFIVCMSYAFHTPDKLSFILDLMNGGD---LHYHLSQHGVFSEADMRFYAAEI 301
Query: 321 ---LHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLA--GTYGYI 375
L H + +++RD+ NILL+ ++D G A D S + A GT+GY+
Sbjct: 302 ILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLA----CDFSKKKPHASVGTHGYM 357
Query: 376 APE-LAYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
APE L + D +S G + ++L G P
Sbjct: 358 APEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 88/197 (44%), Gaps = 10/197 (5%)
Query: 213 IGTGGYGSVYKA-QLPNGKVFALKKLHTS-EELAFIKSFKNEAQVLSQVLHRNIVKLYGY 270
+G+G YGSV A G A+KKL + + K E ++L + H N++ L
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 99
Query: 271 CLHKKCMFLIYE-YMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSI 329
+ + + Y+ + +L+N +L ++ + L Y+H S I
Sbjct: 100 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADI 156
Query: 330 IHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYT-MVMTEK 388
IHRD+ +N+ +N E + DFG AR H D T T Y APE+ M +
Sbjct: 157 IHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE-MTGYVATRWYRAPEIMLNWMHYNQT 213
Query: 389 CDVYSFGVVTLEVLMGK 405
D++S G + E+L G+
Sbjct: 214 VDIWSVGCIMAELLTGR 230
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 79/164 (48%), Gaps = 14/164 (8%)
Query: 250 KNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVN 309
+ E ++L ++ H I+K+ + + +++ E ME G LF + N+ E A
Sbjct: 188 ETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKE---ATCKL 243
Query: 310 IVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAF---VADFGTARLLHADSSNRT 366
M A+ YLH + IIHRD+ N+LL+S+ E + DFG +++L S RT
Sbjct: 244 YFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT 300
Query: 367 LLAGTYGYIAPEL---AYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
L GT Y+APE+ T D +S GV+ L G P
Sbjct: 301 -LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 343
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 88/197 (44%), Gaps = 10/197 (5%)
Query: 213 IGTGGYGSVYKA-QLPNGKVFALKKLHTS-EELAFIKSFKNEAQVLSQVLHRNIVKLYGY 270
+G+G YGSV A G A+KKL + + K E ++L + H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 271 CLHKKCMFLIYE-YMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSI 329
+ + + Y+ + +L+N +L ++ + L Y+H S I
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADI 146
Query: 330 IHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYT-MVMTEK 388
IHRD+ +N+ +N E + DFG AR H D T T Y APE+ M +
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE-MTGYVATRWYRAPEIMLNWMHYNQT 203
Query: 389 CDVYSFGVVTLEVLMGK 405
D++S G + E+L G+
Sbjct: 204 VDIWSVGCIMAELLTGR 220
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 88/197 (44%), Gaps = 10/197 (5%)
Query: 213 IGTGGYGSVYKA-QLPNGKVFALKKLHTS-EELAFIKSFKNEAQVLSQVLHRNIVKLYGY 270
+G+G YGSV A G A+KKL + + K E ++L + H N++ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 271 CLHKKCMFLIYE-YMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSI 329
+ + + Y+ + +L+N +L ++ + L Y+H S I
Sbjct: 86 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADI 142
Query: 330 IHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYT-MVMTEK 388
IHRD+ +N+ +N E + DFG AR H D T T Y APE+ M +
Sbjct: 143 IHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE-MTGYVATRWYRAPEIMLNWMHYNQT 199
Query: 389 CDVYSFGVVTLEVLMGK 405
D++S G + E+L G+
Sbjct: 200 VDIWSVGCIMAELLTGR 216
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 92/203 (45%), Gaps = 21/203 (10%)
Query: 213 IGTGGYGSVYKAQ-LPNGKVFALKKLHTSEELAFIKSFKNEA-QVLSQVLHRNIVKLYGY 270
+G G +G V++ + G A+KK+ ++ F+ E + + IV LYG
Sbjct: 101 LGRGSFGEVHRMEDKQTGFQCAVKKVR-------LEVFRAEELMACAGLTSPRIVPLYGA 153
Query: 271 CLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSII 330
+ + E +E GSL L + + D + + + L YLH S I+
Sbjct: 154 VREGPWVNIFMELLEGGSLG-QLVKEQGCLPED--RALYYLGQALEGLEYLH---SRRIL 207
Query: 331 HRDISSNNILLNS-KLEAFVADFGTARLLHADSSNRTLLAGTY-----GYIAPELAYTMV 384
H D+ ++N+LL+S A + DFG A L D ++LL G Y ++APE+
Sbjct: 208 HGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGRS 267
Query: 385 MTEKCDVYSFGVVTLEVLMGKHP 407
K DV+S + L +L G HP
Sbjct: 268 CDAKVDVWSSCCMMLHMLNGCHP 290
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 89/197 (45%), Gaps = 10/197 (5%)
Query: 213 IGTGGYGSVYKA-QLPNGKVFALKKLHTS-EELAFIKSFKNEAQVLSQVLHRNIVKLYGY 270
+G+G YGSV A G A+KKL + + K E ++L + H N++ L
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 271 CLHKKCMFLIYE-YMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSI 329
+ + + Y+ + +L+N +L ++ + L Y+H S I
Sbjct: 110 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADI 166
Query: 330 IHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYT-MVMTEK 388
IHRD+ +N+ +N E + DFG AR H D +A T Y APE+ M +
Sbjct: 167 IHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQT 223
Query: 389 CDVYSFGVVTLEVLMGK 405
D++S G + E+L G+
Sbjct: 224 VDIWSVGCIMAELLTGR 240
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 95/213 (44%), Gaps = 23/213 (10%)
Query: 206 DFDIRYCIGTGGYGSVYKAQLPN-GKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNI 264
DF + IG GG+G VY + + GK++A+K L IK + E L++ + ++
Sbjct: 190 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKR----IKMKQGETLALNERIMLSL 245
Query: 265 VKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAY---- 320
V G C CM + ++ S +L N D L + + V + A Y
Sbjct: 246 VST-GDCPFIVCMSYAFHTPDKLSFILDLMNGGD---LHYHLSQHGVFSEADMRFYAAEI 301
Query: 321 ---LHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLA--GTYGYI 375
L H + +++RD+ NILL+ ++D G A D S + A GT+GY+
Sbjct: 302 ILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLA----CDFSKKKPHASVGTHGYM 357
Query: 376 APE-LAYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
APE L + D +S G + ++L G P
Sbjct: 358 APEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 93/201 (46%), Gaps = 10/201 (4%)
Query: 212 CIGTGGYGSVYKAQ-LPNGKVFALKKLHTSE-ELAFIKSFKNEAQVLSQVLHRNIVKLYG 269
IG G + V A+ + GK A+K + ++ + ++ E +++ + H NIVKL+
Sbjct: 21 TIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFE 80
Query: 270 YCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSI 329
+K ++L+ EY G +F L + E + + + + A+ Y H I
Sbjct: 81 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF---RQIVSAVQYCHQKF---I 134
Query: 330 IHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYTMVMTE-K 388
+HRD+ + N+LL++ + +ADFG + + G Y APEL +
Sbjct: 135 VHRDLKAENLLLDADMNIKIADFGFSNEF-TFGNKLDAFCGAPPYAAPELFQGKKYDGPE 193
Query: 389 CDVYSFGVVTLEVLMGKHPRD 409
DV+S GV+ ++ G P D
Sbjct: 194 VDVWSLGVILYTLVSGSLPFD 214
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 89/197 (45%), Gaps = 10/197 (5%)
Query: 213 IGTGGYGSVYKA-QLPNGKVFALKKLHTS-EELAFIKSFKNEAQVLSQVLHRNIVKLYGY 270
+G+G YGSV A G A+KKL + + K E ++L + H N++ L
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 108
Query: 271 CLHKKCMFLIYE-YMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSI 329
+ + + Y+ + +L+N +L ++ + L Y+H S I
Sbjct: 109 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADI 165
Query: 330 IHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYT-MVMTEK 388
IHRD+ +N+ +N E + DFG AR H D +A T Y APE+ M +
Sbjct: 166 IHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQT 222
Query: 389 CDVYSFGVVTLEVLMGK 405
D++S G + E+L G+
Sbjct: 223 VDIWSVGCIMAELLTGR 239
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 103/219 (47%), Gaps = 28/219 (12%)
Query: 205 EDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKL-----------HTSEELAFIKSFKNE 252
++++I IG G YG V A+ G+ A+KK+ T EL +K FK++
Sbjct: 55 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHD 114
Query: 253 AQVLSQVLHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVK 312
+ + + R V YG K ++++ + ME L +H+++ + L+ + +
Sbjct: 115 NIIAIKDILRPTVP-YG---EFKSVYVVLDLME-SDLHQIIHSSQ-PLTLEHVR--YFLY 166
Query: 313 AMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNR----TLL 368
+ L Y+H S +IHRD+ +N+L+N E + DFG AR L + T
Sbjct: 167 QLLRGLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEY 223
Query: 369 AGTYGYIAPELAYTM-VMTEKCDVYSFGVVTLEVLMGKH 406
T Y APEL ++ T+ D++S G + E+L +
Sbjct: 224 VATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 262
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 79/164 (48%), Gaps = 14/164 (8%)
Query: 250 KNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVN 309
+ E ++L ++ H I+K+ + + +++ E ME G LF + N+ E A
Sbjct: 202 ETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKE---ATCKL 257
Query: 310 IVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAF---VADFGTARLLHADSSNRT 366
M A+ YLH + IIHRD+ N+LL+S+ E + DFG +++L S RT
Sbjct: 258 YFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT 314
Query: 367 LLAGTYGYIAPEL---AYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
L GT Y+APE+ T D +S GV+ L G P
Sbjct: 315 -LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 357
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 95/213 (44%), Gaps = 23/213 (10%)
Query: 206 DFDIRYCIGTGGYGSVYKAQLPN-GKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNI 264
DF + IG GG+G VY + + GK++A+K L IK + E L++ + ++
Sbjct: 189 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKR----IKMKQGETLALNERIMLSL 244
Query: 265 VKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAY---- 320
V G C CM + ++ S +L N D L + + V + A Y
Sbjct: 245 VST-GDCPFIVCMSYAFHTPDKLSFILDLMNGGD---LHYHLSQHGVFSEADMRFYAAEI 300
Query: 321 ---LHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLA--GTYGYI 375
L H + +++RD+ NILL+ ++D G A D S + A GT+GY+
Sbjct: 301 ILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLA----CDFSKKKPHASVGTHGYM 356
Query: 376 APE-LAYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
APE L + D +S G + ++L G P
Sbjct: 357 APEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 389
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 91/205 (44%), Gaps = 22/205 (10%)
Query: 213 IGTGGYGSVYKAQLPNGKV-FALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYC 271
IG G YG V A KV A+KK+ E + + E ++L + H NI+ +
Sbjct: 39 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 98
Query: 272 L-----HKKCMFLIYEYMERG--SLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHD 324
K ++++ + ME L H + D + + + L Y+H
Sbjct: 99 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI-------CYFLYQILRGLKYIH-- 149
Query: 325 CSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLA---GTYGYIAPELAY 381
S +++HRD+ +N+LLN+ + + DFG AR+ D + L T Y APE+
Sbjct: 150 -SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 208
Query: 382 -TMVMTEKCDVYSFGVVTLEVLMGK 405
+ T+ D++S G + E+L +
Sbjct: 209 NSKGYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 91/205 (44%), Gaps = 22/205 (10%)
Query: 213 IGTGGYGSVYKAQLPNGKV-FALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYC 271
IG G YG V A KV A+KK+ E + + E ++L + H NI+ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 272 L-----HKKCMFLIYEYMERG--SLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHD 324
K ++++ + ME L H + D + + + L Y+H
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI-------CYFLYQILRGLKYIH-- 141
Query: 325 CSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLA---GTYGYIAPELAY 381
S +++HRD+ +N+LLN+ + + DFG AR+ D + L T Y APE+
Sbjct: 142 -SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 200
Query: 382 -TMVMTEKCDVYSFGVVTLEVLMGK 405
+ T+ D++S G + E+L +
Sbjct: 201 NSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 91/205 (44%), Gaps = 22/205 (10%)
Query: 213 IGTGGYGSVYKAQLPNGKV-FALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYC 271
IG G YG V A KV A+KK+ E + + E ++L + H NI+ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 272 L-----HKKCMFLIYEYMERG--SLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHD 324
K ++++ + ME L H + D + + + L Y+H
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI-------CYFLYQILRGLKYIH-- 141
Query: 325 CSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLA---GTYGYIAPELAY 381
S +++HRD+ +N+LLN+ + + DFG AR+ D + L T Y APE+
Sbjct: 142 -SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 200
Query: 382 -TMVMTEKCDVYSFGVVTLEVLMGK 405
+ T+ D++S G + E+L +
Sbjct: 201 NSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 92/206 (44%), Gaps = 15/206 (7%)
Query: 207 FDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVK 266
+ + IG G +G V A ++ K + + FK E +++ + H NI++
Sbjct: 11 YTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIR 70
Query: 267 LYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCS 326
LY ++L+ E G LF + + E D A+ I+K + A+AY H
Sbjct: 71 LYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAAR---IMKDVLSAVAYCH---K 124
Query: 327 PSIIHRDISSNNILL-----NSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAY 381
++ HRD+ N L +S L+ + DFG A RT + GT Y++P++
Sbjct: 125 LNVAHRDLKPENFLFLTDSPDSPLK--LIDFGLAARFKPGKMMRTKV-GTPYYVSPQVLE 181
Query: 382 TMVMTEKCDVYSFGVVTLEVLMGKHP 407
+ E CD +S GV+ +L G P
Sbjct: 182 GLYGPE-CDEWSAGVMMYVLLCGYPP 206
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 88/197 (44%), Gaps = 10/197 (5%)
Query: 213 IGTGGYGSVYKA-QLPNGKVFALKKLHTS-EELAFIKSFKNEAQVLSQVLHRNIVKLYGY 270
IG+G YGSV A G A+KKL + + K E ++L + H N++ L
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 271 CLHKKCMFLIYE-YMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSI 329
+ + + Y+ + +L+N +L ++ + L Y+H S I
Sbjct: 95 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADI 151
Query: 330 IHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYT-MVMTEK 388
IHRD+ +N+ +N E + DFG AR H D T T Y APE+ M +
Sbjct: 152 IHRDLKPSNLAVNEDXELKILDFGLAR--HTDDE-MTGYVATRWYRAPEIMLNWMHYNQT 208
Query: 389 CDVYSFGVVTLEVLMGK 405
D++S G + E+L G+
Sbjct: 209 VDIWSVGCIMAELLTGR 225
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 91/205 (44%), Gaps = 22/205 (10%)
Query: 213 IGTGGYGSVYKAQLPNGKV-FALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYC 271
IG G YG V A KV A+KK+ E + + E ++L + H NI+ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 272 L-----HKKCMFLIYEYMERG--SLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHD 324
K ++++ + ME L H + D + + + L Y+H
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI-------CYFLYQILRGLKYIH-- 141
Query: 325 CSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLA---GTYGYIAPELAY 381
S +++HRD+ +N+LLN+ + + DFG AR+ D + L T Y APE+
Sbjct: 142 -SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 200
Query: 382 -TMVMTEKCDVYSFGVVTLEVLMGK 405
+ T+ D++S G + E+L +
Sbjct: 201 NSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 91/205 (44%), Gaps = 22/205 (10%)
Query: 213 IGTGGYGSVYKAQLPNGKV-FALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYC 271
IG G YG V A KV A+KK+ E + + E ++L + H NI+ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 272 L-----HKKCMFLIYEYMERG--SLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHD 324
K ++++ + ME L H + D + + + L Y+H
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI-------CYFLYQILRGLKYIH-- 141
Query: 325 CSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLA---GTYGYIAPELAY 381
S +++HRD+ +N+LLN+ + + DFG AR+ D + L T Y APE+
Sbjct: 142 -SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 200
Query: 382 -TMVMTEKCDVYSFGVVTLEVLMGK 405
+ T+ D++S G + E+L +
Sbjct: 201 NSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 91/205 (44%), Gaps = 22/205 (10%)
Query: 213 IGTGGYGSVYKAQLPNGKV-FALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYC 271
IG G YG V A KV A+KK+ E + + E ++L + H NI+ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 92
Query: 272 L-----HKKCMFLIYEYMERG--SLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHD 324
K ++++ + ME L H + D + + + L Y+H
Sbjct: 93 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI-------CYFLYQILRGLKYIH-- 143
Query: 325 CSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLA---GTYGYIAPELAY 381
S +++HRD+ +N+LLN+ + + DFG AR+ D + L T Y APE+
Sbjct: 144 -SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 202
Query: 382 -TMVMTEKCDVYSFGVVTLEVLMGK 405
+ T+ D++S G + E+L +
Sbjct: 203 NSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 102/211 (48%), Gaps = 15/211 (7%)
Query: 202 EATEDFDIRYCIGTGGYGSVYK-AQLPNGKVFALK--KLHTSEELAFIKSFKNEAQVLSQ 258
E E + I +G G +G V++ + + K + K K+ ++++ K E +L+
Sbjct: 2 ELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLV----KKEISILNI 57
Query: 259 VLHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHAL 318
HRNI+ L+ + + +I+E++ +F + N A EL+ + V+ V + AL
Sbjct: 58 ARHRNILHLHESFESMEELVMIFEFISGLDIFERI--NTSAFELNEREIVSYVHQVCEAL 115
Query: 319 AYLHHDCSPSIIHRDISSNNILLNSKLEAFVA--DFGTARLLHADSSNRTLLAGTYGYIA 376
+LH S +I H DI NI+ ++ + + +FG AR L + R L Y A
Sbjct: 116 QFLH---SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAP-EYYA 171
Query: 377 PELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
PE+ V++ D++S G + +L G +P
Sbjct: 172 PEVHQHDVVSTATDMWSLGTLVYVLLSGINP 202
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 91/205 (44%), Gaps = 22/205 (10%)
Query: 213 IGTGGYGSVYKAQLPNGKV-FALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYC 271
IG G YG V A KV A+KK+ E + + E ++L + H NI+ +
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 88
Query: 272 L-----HKKCMFLIYEYMERG--SLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHD 324
K ++++ + ME L H + D + + + L Y+H
Sbjct: 89 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI-------CYFLYQILRGLKYIH-- 139
Query: 325 CSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLA---GTYGYIAPELAY 381
S +++HRD+ +N+LLN+ + + DFG AR+ D + L T Y APE+
Sbjct: 140 -SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 198
Query: 382 -TMVMTEKCDVYSFGVVTLEVLMGK 405
+ T+ D++S G + E+L +
Sbjct: 199 NSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 91/205 (44%), Gaps = 22/205 (10%)
Query: 213 IGTGGYGSVYKAQLPNGKV-FALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYC 271
IG G YG V A KV A+KK+ E + + E ++L + H NI+ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENIIGINDII 94
Query: 272 L-----HKKCMFLIYEYMERG--SLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHD 324
K ++++ + ME L H + D + + + L Y+H
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI-------CYFLYQILRGLKYIH-- 145
Query: 325 CSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLA---GTYGYIAPELAY 381
S +++HRD+ +N+LLN+ + + DFG AR+ D + L T Y APE+
Sbjct: 146 -SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 204
Query: 382 -TMVMTEKCDVYSFGVVTLEVLMGK 405
+ T+ D++S G + E+L +
Sbjct: 205 NSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 88/197 (44%), Gaps = 10/197 (5%)
Query: 213 IGTGGYGSVYKA-QLPNGKVFALKKLHTS-EELAFIKSFKNEAQVLSQVLHRNIVKLYGY 270
+G+G YGSV A G A+KKL + + K E ++L + H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 271 CLHKKCMFLIYE-YMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSI 329
+ + + Y+ + +L+N +L ++ + L Y+H S I
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADI 146
Query: 330 IHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYT-MVMTEK 388
IHRD+ +N+ +N E + DFG AR H D T T Y APE+ M +
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE-MTGXVATRWYRAPEIMLNWMHYNQT 203
Query: 389 CDVYSFGVVTLEVLMGK 405
D++S G + E+L G+
Sbjct: 204 VDIWSVGCIMAELLTGR 220
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 103/219 (47%), Gaps = 28/219 (12%)
Query: 205 EDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKL-----------HTSEELAFIKSFKNE 252
++++I IG G YG V A+ G+ A+KK+ T EL +K FK++
Sbjct: 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHD 113
Query: 253 AQVLSQVLHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVK 312
+ + + R V YG K ++++ + ME L +H+++ + L+ + +
Sbjct: 114 NIIAIKDILRPTVP-YGEF---KSVYVVLDLME-SDLHQIIHSSQ-PLTLEHVR--YFLY 165
Query: 313 AMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNR----TLL 368
+ L Y+H S +IHRD+ +N+L+N E + DFG AR L + T
Sbjct: 166 QLLRGLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEY 222
Query: 369 AGTYGYIAPELAYTM-VMTEKCDVYSFGVVTLEVLMGKH 406
T Y APEL ++ T+ D++S G + E+L +
Sbjct: 223 VATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 261
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 91/205 (44%), Gaps = 22/205 (10%)
Query: 213 IGTGGYGSVYKAQLPNGKV-FALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYC 271
IG G YG V A KV A+KK+ E + + E ++L + H NI+ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 272 L-----HKKCMFLIYEYMERG--SLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHD 324
K ++++ + ME L H + D + + + L Y+H
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI-------CYFLYQILRGLKYIH-- 145
Query: 325 CSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLL---AGTYGYIAPELAY 381
S +++HRD+ +N+LLN+ + + DFG AR+ D + L T Y APE+
Sbjct: 146 -SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIML 204
Query: 382 -TMVMTEKCDVYSFGVVTLEVLMGK 405
+ T+ D++S G + E+L +
Sbjct: 205 NSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 91/205 (44%), Gaps = 22/205 (10%)
Query: 213 IGTGGYGSVYKAQLPNGKV-FALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYC 271
IG G YG V A KV A+KK+ E + + E ++L + H NI+ +
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 95
Query: 272 L-----HKKCMFLIYEYMERG--SLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHD 324
K ++++ + ME L H + D + + + L Y+H
Sbjct: 96 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI-------CYFLYQILRGLKYIH-- 146
Query: 325 CSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLL---AGTYGYIAPELAY 381
S +++HRD+ +N+LLN+ + + DFG AR+ D + L T Y APE+
Sbjct: 147 -SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIML 205
Query: 382 -TMVMTEKCDVYSFGVVTLEVLMGK 405
+ T+ D++S G + E+L +
Sbjct: 206 NSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 91/205 (44%), Gaps = 22/205 (10%)
Query: 213 IGTGGYGSVYKAQLPNGKV-FALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYC 271
IG G YG V A KV A+KK+ E + + E ++L + H NI+ +
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 95
Query: 272 L-----HKKCMFLIYEYMERG--SLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHD 324
K ++++ + ME L H + D + + + L Y+H
Sbjct: 96 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI-------CYFLYQILRGLKYIH-- 146
Query: 325 CSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLA---GTYGYIAPELAY 381
S +++HRD+ +N+LLN+ + + DFG AR+ D + L T Y APE+
Sbjct: 147 -SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 205
Query: 382 -TMVMTEKCDVYSFGVVTLEVLMGK 405
+ T+ D++S G + E+L +
Sbjct: 206 NSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 91/205 (44%), Gaps = 22/205 (10%)
Query: 213 IGTGGYGSVYKAQLPNGKV-FALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYC 271
IG G YG V A KV A+KK+ E + + E ++L + H NI+ +
Sbjct: 37 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 96
Query: 272 L-----HKKCMFLIYEYMERG--SLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHD 324
K ++++ + ME L H + D + + + L Y+H
Sbjct: 97 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI-------CYFLYQILRGLKYIH-- 147
Query: 325 CSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLA---GTYGYIAPELAY 381
S +++HRD+ +N+LLN+ + + DFG AR+ D + L T Y APE+
Sbjct: 148 -SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 206
Query: 382 -TMVMTEKCDVYSFGVVTLEVLMGK 405
+ T+ D++S G + E+L +
Sbjct: 207 NSKGYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 91/205 (44%), Gaps = 22/205 (10%)
Query: 213 IGTGGYGSVYKAQLPNGKV-FALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYC 271
IG G YG V A KV A+KK+ E + + E ++L + H NI+ +
Sbjct: 28 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 87
Query: 272 L-----HKKCMFLIYEYMERG--SLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHD 324
K ++++ + ME L H + D + + + L Y+H
Sbjct: 88 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI-------CYFLYQILRGLKYIH-- 138
Query: 325 CSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLA---GTYGYIAPELAY 381
S +++HRD+ +N+LLN+ + + DFG AR+ D + L T Y APE+
Sbjct: 139 -SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 197
Query: 382 -TMVMTEKCDVYSFGVVTLEVLMGK 405
+ T+ D++S G + E+L +
Sbjct: 198 NSKGYTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 91/205 (44%), Gaps = 22/205 (10%)
Query: 213 IGTGGYGSVYKAQLPNGKV-FALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYC 271
IG G YG V A KV A+KK+ E + + E ++L + H NI+ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 272 L-----HKKCMFLIYEYMERG--SLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHD 324
K ++++ + ME L H + D + + + L Y+H
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI-------CYFLYQILRGLKYIH-- 145
Query: 325 CSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLA---GTYGYIAPELAY 381
S +++HRD+ +N+LLN+ + + DFG AR+ D + L T Y APE+
Sbjct: 146 -SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 204
Query: 382 -TMVMTEKCDVYSFGVVTLEVLMGK 405
+ T+ D++S G + E+L +
Sbjct: 205 NSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 92/199 (46%), Gaps = 14/199 (7%)
Query: 213 IGTGGYGSV---YKAQLPNGKVFALKKLHTS-EELAFIKSFKNEAQVLSQVLHRNIVKLY 268
+G+G YGSV Y A+L KV A+KKL + L + E ++L + H N++ L
Sbjct: 36 VGSGAYGSVCSAYDARL-RQKV-AVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 269 GYCLHKKCMFLIYE-YMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSP 327
+ E Y+ + +L+N + L +V + L Y+H S
Sbjct: 94 DVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQFLVYQLLRGLKYIH---SA 150
Query: 328 SIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYT-MVMT 386
IIHRD+ +N+ +N E + DFG AR AD +A T Y APE+ M
Sbjct: 151 GIIHRDLKPSNVAVNEDSELRILDFGLAR--QADEEMTGYVA-TRWYRAPEIMLNWMHYN 207
Query: 387 EKCDVYSFGVVTLEVLMGK 405
+ D++S G + E+L GK
Sbjct: 208 QTVDIWSVGCIMAELLQGK 226
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 91/199 (45%), Gaps = 14/199 (7%)
Query: 213 IGTGGYGSV---YKAQLPNGKVFALKKLHTS-EELAFIKSFKNEAQVLSQVLHRNIVKLY 268
+G+G YGSV Y A+L KV A+KKL + L + E ++L + H N++ L
Sbjct: 28 VGSGAYGSVCSAYDARL-RQKV-AVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 85
Query: 269 GYCLHKKCMFLIYE-YMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSP 327
+ E Y+ + +L+N L +V + L Y+H S
Sbjct: 86 DVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIH---SA 142
Query: 328 SIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYT-MVMT 386
IIHRD+ +N+ +N E + DFG AR AD +A T Y APE+ M
Sbjct: 143 GIIHRDLKPSNVAVNEDCELRILDFGLAR--QADEEMTGYVA-TRWYRAPEIMLNWMHYN 199
Query: 387 EKCDVYSFGVVTLEVLMGK 405
+ D++S G + E+L GK
Sbjct: 200 QTVDIWSVGCIMAELLQGK 218
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 91/205 (44%), Gaps = 22/205 (10%)
Query: 213 IGTGGYGSVYKAQLPNGKV-FALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYC 271
IG G YG V A KV A+KK+ E + + E ++L + H NI+ +
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 110
Query: 272 L-----HKKCMFLIYEYMERG--SLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHD 324
K ++++ + ME L H + D + + + L Y+H
Sbjct: 111 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI-------CYFLYQILRGLKYIH-- 161
Query: 325 CSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLA---GTYGYIAPELAY 381
S +++HRD+ +N+LLN+ + + DFG AR+ D + L T Y APE+
Sbjct: 162 -SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 220
Query: 382 -TMVMTEKCDVYSFGVVTLEVLMGK 405
+ T+ D++S G + E+L +
Sbjct: 221 NSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 88/197 (44%), Gaps = 10/197 (5%)
Query: 213 IGTGGYGSVYKA-QLPNGKVFALKKLHTS-EELAFIKSFKNEAQVLSQVLHRNIVKLYGY 270
+G+G YGSV A G A+KKL + + K E ++L + H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 271 CLHKKCMFLIYE-YMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSI 329
+ + + Y+ + +L+N +L ++ + L Y+H S I
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKYIH---SADI 146
Query: 330 IHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYT-MVMTEK 388
IHRD+ +N+ +N E + DFG AR H D T T Y APE+ M +
Sbjct: 147 IHRDLKPSNLAVNEDXELKILDFGLAR--HTDDE-MTGYVATRWYRAPEIMLNWMHYNQT 203
Query: 389 CDVYSFGVVTLEVLMGK 405
D++S G + E+L G+
Sbjct: 204 VDIWSVGCIMAELLTGR 220
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 91/205 (44%), Gaps = 22/205 (10%)
Query: 213 IGTGGYGSVYKAQLPNGKV-FALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYC 271
IG G YG V A KV A+KK+ E + + E ++L + H NI+ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 272 L-----HKKCMFLIYEYMERG--SLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHD 324
K ++++ + ME L H + D + + + L Y+H
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI-------CYFLYQILRGLKYIH-- 145
Query: 325 CSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLA---GTYGYIAPELAY 381
S +++HRD+ +N+LLN+ + + DFG AR+ D + L T Y APE+
Sbjct: 146 -SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 204
Query: 382 -TMVMTEKCDVYSFGVVTLEVLMGK 405
+ T+ D++S G + E+L +
Sbjct: 205 NSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 88/197 (44%), Gaps = 10/197 (5%)
Query: 213 IGTGGYGSVYKA-QLPNGKVFALKKLHTS-EELAFIKSFKNEAQVLSQVLHRNIVKLYGY 270
+G+G YGSV A G A+KKL + + K E ++L + H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 271 CLHKKCMFLIYE-YMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSI 329
+ + + Y+ + +L+N +L ++ + L Y+H S I
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADI 146
Query: 330 IHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYT-MVMTEK 388
IHRD+ +N+ +N E + DFG AR H D T T Y APE+ M +
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE-MTGYVATRWYRAPEIMLNWMHYNQT 203
Query: 389 CDVYSFGVVTLEVLMGK 405
D++S G + E+L G+
Sbjct: 204 VDIWSVGCIMAELLTGR 220
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 91/205 (44%), Gaps = 22/205 (10%)
Query: 213 IGTGGYGSVYKAQLPNGKV-FALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYC 271
IG G YG V A KV A+KK+ E + + E ++L + H NI+ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 272 L-----HKKCMFLIYEYMERG--SLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHD 324
K ++++ + ME L H + D + + + L Y+H
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI-------CYFLYQILRGLKYIH-- 141
Query: 325 CSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLA---GTYGYIAPELAY 381
S +++HRD+ +N+LLN+ + + DFG AR+ D + L T Y APE+
Sbjct: 142 -SANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 200
Query: 382 -TMVMTEKCDVYSFGVVTLEVLMGK 405
+ T+ D++S G + E+L +
Sbjct: 201 NSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 90/206 (43%), Gaps = 7/206 (3%)
Query: 206 DFDIRYCIGTGGYGSVYKAQ-LPNGKVFALKKLHTSEELAFIKSFKN---EAQVLSQVLH 261
+F I IG G + VY+A L +G ALKK+ + L K+ + E +L Q+ H
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFD-LMDAKARADCIKEIDLLKQLNH 91
Query: 262 RNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYL 321
N++K Y + + ++ E + G L + + + L + K + L
Sbjct: 92 PNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRL--IPERTVWKYFVQLCSAL 149
Query: 322 HHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAY 381
H S ++HRDI N+ + + + D G R + ++ L GT Y++PE +
Sbjct: 150 EHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIH 209
Query: 382 TMVMTEKCDVYSFGVVTLEVLMGKHP 407
K D++S G + E+ + P
Sbjct: 210 ENGYNFKSDIWSLGCLLYEMAALQSP 235
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 91/205 (44%), Gaps = 22/205 (10%)
Query: 213 IGTGGYGSVYKAQLPNGKV-FALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYC 271
IG G YG V A KV A+KK+ E + + E ++L + H NI+ +
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 88
Query: 272 L-----HKKCMFLIYEYMERG--SLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHD 324
K ++++ + ME L H + D + + + L Y+H
Sbjct: 89 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI-------CYFLYQILRGLKYIH-- 139
Query: 325 CSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLA---GTYGYIAPELAY 381
S +++HRD+ +N+LLN+ + + DFG AR+ D + L T Y APE+
Sbjct: 140 -SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 198
Query: 382 -TMVMTEKCDVYSFGVVTLEVLMGK 405
+ T+ D++S G + E+L +
Sbjct: 199 NSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 88/197 (44%), Gaps = 10/197 (5%)
Query: 213 IGTGGYGSVYKA-QLPNGKVFALKKLHTS-EELAFIKSFKNEAQVLSQVLHRNIVKLYGY 270
+G+G YGSV A G A+KKL + + K E ++L + H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 271 CLHKKCMFLIYE-YMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSI 329
+ + + Y+ + +L+N +L ++ + L Y+H S I
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADI 146
Query: 330 IHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYT-MVMTEK 388
IHRD+ +N+ +N E + DFG AR H D T T Y APE+ M +
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE-MTGYVATRWYRAPEIMLNWMHYNQT 203
Query: 389 CDVYSFGVVTLEVLMGK 405
D++S G + E+L G+
Sbjct: 204 VDIWSVGCIMAELLTGR 220
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 95/200 (47%), Gaps = 13/200 (6%)
Query: 213 IGTGGYGSVYKAQ-LPNGKVFALKKLHTSEELAFIKSFK-NEAQVLSQVLHRNIVKLYGY 270
IG G YG+V+KA+ ++ ALK++ ++ + S E +L ++ H+NIV+L+
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 271 CLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRV--NIVKAMAHALAYLHHDCSPS 328
K + L++E+ ++ +L D+ D + + + + L + H S +
Sbjct: 70 LHSDKKLTLVFEFCDQ-----DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCH---SRN 121
Query: 329 IIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAY-TMVMTE 387
++HRD+ N+L+N E +A+FG AR + T Y P++ + + +
Sbjct: 122 VLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYST 181
Query: 388 KCDVYSFGVVTLEVLMGKHP 407
D++S G + E+ P
Sbjct: 182 SIDMWSAGCIFAELANAGRP 201
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 88/197 (44%), Gaps = 10/197 (5%)
Query: 213 IGTGGYGSVYKA-QLPNGKVFALKKLHTS-EELAFIKSFKNEAQVLSQVLHRNIVKLYGY 270
+G+G YGSV A G A+KKL + + K E ++L + H N++ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 271 CLHKKCMFLIYE-YMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSI 329
+ + + Y+ + +L+N +L ++ + L Y+H S I
Sbjct: 86 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADI 142
Query: 330 IHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYT-MVMTEK 388
IHRD+ +N+ +N E + DFG AR H D T T Y APE+ M +
Sbjct: 143 IHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE-MTGYVATRWYRAPEIMLNWMHYNQT 199
Query: 389 CDVYSFGVVTLEVLMGK 405
D++S G + E+L G+
Sbjct: 200 VDIWSVGCIMAELLTGR 216
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 88/197 (44%), Gaps = 10/197 (5%)
Query: 213 IGTGGYGSVYKA-QLPNGKVFALKKLHTS-EELAFIKSFKNEAQVLSQVLHRNIVKLYGY 270
+G+G YGSV A G A+KKL + + K E ++L + H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 271 CLHKKCMFLIYE-YMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSI 329
+ + + Y+ + +L+N +L ++ + L Y+H S I
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADI 146
Query: 330 IHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYT-MVMTEK 388
IHRD+ +N+ +N E + DFG AR H D T T Y APE+ M +
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE-MTGYVATRWYRAPEIMLNWMHYNQT 203
Query: 389 CDVYSFGVVTLEVLMGK 405
D++S G + E+L G+
Sbjct: 204 VDIWSVGCIMAELLTGR 220
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 88/197 (44%), Gaps = 10/197 (5%)
Query: 213 IGTGGYGSVYKA-QLPNGKVFALKKLHTS-EELAFIKSFKNEAQVLSQVLHRNIVKLYGY 270
+G+G YGSV A G A+KKL + + K E ++L + H N++ L
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 86
Query: 271 CLHKKCMFLIYE-YMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSI 329
+ + + Y+ + +L+N +L ++ + L Y+H S I
Sbjct: 87 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADI 143
Query: 330 IHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYT-MVMTEK 388
IHRD+ +N+ +N E + DFG AR H D T T Y APE+ M +
Sbjct: 144 IHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE-MTGYVATRWYRAPEIMLNWMHYNQT 200
Query: 389 CDVYSFGVVTLEVLMGK 405
D++S G + E+L G+
Sbjct: 201 VDIWSVGCIMAELLTGR 217
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 90/200 (45%), Gaps = 17/200 (8%)
Query: 213 IGTGGYG--SVYKAQLPN---GKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKL 267
+G G +G S+Y N G++ A+K L +K E +L + H +I+K
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 268 YGYCLHK--KCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDC 325
G C + K + L+ EY+ GSL L + + A+ + + + +AYLH
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGL----AQLLLFAQQICEGMAYLH--- 134
Query: 326 SPSIIHRDISSNNILLNSKLEAFVADFGTARLL---HADSSNRTLLAGTYGYIAPELAYT 382
S IHR++++ N+LL++ + DFG A+ + H R + APE
Sbjct: 135 SQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKE 194
Query: 383 MVMTEKCDVYSFGVVTLEVL 402
DV+SFGV E+L
Sbjct: 195 YKFYYASDVWSFGVTLYELL 214
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 88/197 (44%), Gaps = 10/197 (5%)
Query: 213 IGTGGYGSVYKA-QLPNGKVFALKKLHTS-EELAFIKSFKNEAQVLSQVLHRNIVKLYGY 270
+G+G YGSV A G A+KKL + + K E ++L + H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 271 CLHKKCMFLIYE-YMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSI 329
+ + + Y+ + +L+N +L ++ + L Y+H S I
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADI 146
Query: 330 IHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAY-TMVMTEK 388
IHRD+ +N+ +N E + DFG AR H D T T Y APE+ M +
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE-MTGYVATRWYRAPEIMLNAMHYNQT 203
Query: 389 CDVYSFGVVTLEVLMGK 405
D++S G + E+L G+
Sbjct: 204 VDIWSVGCIMAELLTGR 220
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 88/197 (44%), Gaps = 10/197 (5%)
Query: 213 IGTGGYGSVYKA-QLPNGKVFALKKLHTS-EELAFIKSFKNEAQVLSQVLHRNIVKLYGY 270
+G+G YGSV A G A+KKL + + K E ++L + H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 271 CLHKKCMFLIYE-YMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSI 329
+ + + Y+ + +L+N +L ++ + L Y+H S I
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADI 146
Query: 330 IHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYT-MVMTEK 388
IHRD+ +N+ +N E + DFG AR H D T T Y APE+ M +
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE-MTGYVATRWYRAPEIMLNWMHYNQT 203
Query: 389 CDVYSFGVVTLEVLMGK 405
D++S G + E+L G+
Sbjct: 204 VDIWSVGCIMAELLTGR 220
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 88/197 (44%), Gaps = 10/197 (5%)
Query: 213 IGTGGYGSVYKA-QLPNGKVFALKKLHTS-EELAFIKSFKNEAQVLSQVLHRNIVKLYGY 270
+G+G YGSV A G A+KKL + + K E ++L + H N++ L
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 100
Query: 271 CLHKKCMFLIYE-YMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSI 329
+ + + Y+ + +L+N +L ++ + L Y+H S I
Sbjct: 101 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADI 157
Query: 330 IHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYT-MVMTEK 388
IHRD+ +N+ +N E + DFG AR H D T T Y APE+ M +
Sbjct: 158 IHRDLKPSNLAVNEDXELKILDFGLAR--HTDDE-MTGYVATRWYRAPEIMLNWMHYNQT 214
Query: 389 CDVYSFGVVTLEVLMGK 405
D++S G + E+L G+
Sbjct: 215 VDIWSVGCIMAELLTGR 231
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 88/197 (44%), Gaps = 10/197 (5%)
Query: 213 IGTGGYGSVYKA-QLPNGKVFALKKLHTS-EELAFIKSFKNEAQVLSQVLHRNIVKLYGY 270
+G+G YGSV A G A+KKL + + K E ++L + H N++ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 271 CLHKKCMFLIYE-YMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSI 329
+ + + Y+ + +L+N +L ++ + L Y+H S I
Sbjct: 92 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADI 148
Query: 330 IHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYT-MVMTEK 388
IHRD+ +N+ +N E + DFG AR H D T T Y APE+ M +
Sbjct: 149 IHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE-MTGYVATRWYRAPEIMLNWMHYNQT 205
Query: 389 CDVYSFGVVTLEVLMGK 405
D++S G + E+L G+
Sbjct: 206 VDIWSVGCIMAELLTGR 222
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 92/206 (44%), Gaps = 15/206 (7%)
Query: 207 FDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVK 266
+ + IG G +G V A ++ K + + FK E +++ + H NI++
Sbjct: 28 YTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIR 87
Query: 267 LYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCS 326
LY ++L+ E G LF + + E D A+ I+K + A+AY H
Sbjct: 88 LYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAAR---IMKDVLSAVAYCH---K 141
Query: 327 PSIIHRDISSNNILL-----NSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAY 381
++ HRD+ N L +S L+ + DFG A RT + GT Y++P++
Sbjct: 142 LNVAHRDLKPENFLFLTDSPDSPLK--LIDFGLAARFKPGKMMRTKV-GTPYYVSPQVLE 198
Query: 382 TMVMTEKCDVYSFGVVTLEVLMGKHP 407
+ E CD +S GV+ +L G P
Sbjct: 199 GLYGPE-CDEWSAGVMMYVLLCGYPP 223
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 88/197 (44%), Gaps = 10/197 (5%)
Query: 213 IGTGGYGSVYKA-QLPNGKVFALKKLHTS-EELAFIKSFKNEAQVLSQVLHRNIVKLYGY 270
+G+G YGSV A G A+KKL + + K E ++L + H N++ L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 271 CLHKKCMFLIYE-YMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSI 329
+ + + Y+ + +L+N +L ++ + L Y+H S I
Sbjct: 95 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADI 151
Query: 330 IHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYT-MVMTEK 388
IHRD+ +N+ +N E + DFG AR H D T T Y APE+ M +
Sbjct: 152 IHRDLKPSNLAVNEDXELKILDFGLAR--HTDDE-MTGYVATRWYRAPEIMLNWMHYNQT 208
Query: 389 CDVYSFGVVTLEVLMGK 405
D++S G + E+L G+
Sbjct: 209 VDIWSVGCIMAELLTGR 225
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 88/197 (44%), Gaps = 10/197 (5%)
Query: 213 IGTGGYGSVYKA-QLPNGKVFALKKLHTS-EELAFIKSFKNEAQVLSQVLHRNIVKLYGY 270
+G+G YGSV A G A+KKL + + K E ++L + H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 271 CLHKKCMFLIYE-YMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSI 329
+ + + Y+ + +L+N +L ++ + L Y+H S I
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADI 146
Query: 330 IHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYT-MVMTEK 388
IHRD+ +N+ +N E + DFG AR H D T T Y APE+ M +
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE-MTGYVATRWYRAPEIMLNWMHYNQT 203
Query: 389 CDVYSFGVVTLEVLMGK 405
D++S G + E+L G+
Sbjct: 204 VDIWSVGCIMAELLTGR 220
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 88/197 (44%), Gaps = 10/197 (5%)
Query: 213 IGTGGYGSVYKA-QLPNGKVFALKKLHTS-EELAFIKSFKNEAQVLSQVLHRNIVKLYGY 270
+G+G YGSV A G A+KKL + + K E ++L + H N++ L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 271 CLHKKCMFLIYE-YMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSI 329
+ + + Y+ + +L+N +L ++ + L Y+H S I
Sbjct: 95 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADI 151
Query: 330 IHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYT-MVMTEK 388
IHRD+ +N+ +N E + DFG AR H D T T Y APE+ M +
Sbjct: 152 IHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE-MTGYVATRWYRAPEIMLNWMHYNQT 208
Query: 389 CDVYSFGVVTLEVLMGK 405
D++S G + E+L G+
Sbjct: 209 VDIWSVGCIMAELLTGR 225
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 88/197 (44%), Gaps = 10/197 (5%)
Query: 213 IGTGGYGSVYKA-QLPNGKVFALKKLHTS-EELAFIKSFKNEAQVLSQVLHRNIVKLYGY 270
+G+G YGSV A G A+KKL + + K E ++L + H N++ L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 271 CLHKKCMFLIYE-YMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSI 329
+ + + Y+ + +L+N +L ++ + L Y+H S I
Sbjct: 95 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADI 151
Query: 330 IHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYT-MVMTEK 388
IHRD+ +N+ +N E + DFG AR H D T T Y APE+ M +
Sbjct: 152 IHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE-MTGYVATRWYRAPEIMLNWMHYNQT 208
Query: 389 CDVYSFGVVTLEVLMGK 405
D++S G + E+L G+
Sbjct: 209 VDIWSVGCIMAELLTGR 225
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 89/197 (45%), Gaps = 10/197 (5%)
Query: 213 IGTGGYGSVYKA-QLPNGKVFALKKLHTS-EELAFIKSFKNEAQVLSQVLHRNIVKLYGY 270
+G+G YGSV A G A+KKL + + K E ++L + H N++ L
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 271 CLHKKCMFLIYE-YMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSI 329
+ + + Y+ + +L+N +L ++ + L Y+H S I
Sbjct: 110 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADI 166
Query: 330 IHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYT-MVMTEK 388
IHRD+ +N+ +N E + DFG AR H D +A T Y APE+ M +
Sbjct: 167 IHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQT 223
Query: 389 CDVYSFGVVTLEVLMGK 405
D++S G + E+L G+
Sbjct: 224 VDIWSVGCIMAELLTGR 240
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 88/197 (44%), Gaps = 10/197 (5%)
Query: 213 IGTGGYGSVYKA-QLPNGKVFALKKLHTS-EELAFIKSFKNEAQVLSQVLHRNIVKLYGY 270
+G+G YGSV A G A+KKL + + K E ++L + H N++ L
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 88
Query: 271 CLHKKCMFLIYE-YMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSI 329
+ + + Y+ + +L+N +L ++ + L Y+H S I
Sbjct: 89 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADI 145
Query: 330 IHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYT-MVMTEK 388
IHRD+ +N+ +N E + DFG AR H D T T Y APE+ M +
Sbjct: 146 IHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE-MTGYVATRWYRAPEIMLNWMHYNQT 202
Query: 389 CDVYSFGVVTLEVLMGK 405
D++S G + E+L G+
Sbjct: 203 VDIWSVGCIMAELLTGR 219
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 88/197 (44%), Gaps = 10/197 (5%)
Query: 213 IGTGGYGSVYKA-QLPNGKVFALKKLHTS-EELAFIKSFKNEAQVLSQVLHRNIVKLYGY 270
+G+G YGSV A G A+KKL + + K E ++L + H N++ L
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 87
Query: 271 CLHKKCMFLIYE-YMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSI 329
+ + + Y+ + +L+N +L ++ + L Y+H S I
Sbjct: 88 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADI 144
Query: 330 IHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYT-MVMTEK 388
IHRD+ +N+ +N E + DFG AR H D T T Y APE+ M +
Sbjct: 145 IHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE-MTGYVATRWYRAPEIMLNWMHYNQT 201
Query: 389 CDVYSFGVVTLEVLMGK 405
D++S G + E+L G+
Sbjct: 202 VDIWSVGCIMAELLTGR 218
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 89/197 (45%), Gaps = 10/197 (5%)
Query: 213 IGTGGYGSVYKA-QLPNGKVFALKKLHTS-EELAFIKSFKNEAQVLSQVLHRNIVKLYGY 270
+G+G YGSV A G A+KKL + + K E ++L + H N++ L
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 108
Query: 271 CLHKKCMFLIYE-YMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSI 329
+ + + Y+ + +L+N +L ++ + L Y+H S I
Sbjct: 109 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADI 165
Query: 330 IHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYT-MVMTEK 388
IHRD+ +N+ +N E + DFG AR H D +A T Y APE+ M +
Sbjct: 166 IHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQT 222
Query: 389 CDVYSFGVVTLEVLMGK 405
D++S G + E+L G+
Sbjct: 223 VDIWSVGCIMAELLTGR 239
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 88/197 (44%), Gaps = 10/197 (5%)
Query: 213 IGTGGYGSVYKA-QLPNGKVFALKKLHTS-EELAFIKSFKNEAQVLSQVLHRNIVKLYGY 270
+G+G YGSV A G A+KKL + + K E ++L + H N++ L
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 86
Query: 271 CLHKKCMFLIYE-YMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSI 329
+ + + Y+ + +L+N +L ++ + L Y+H S I
Sbjct: 87 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADI 143
Query: 330 IHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYT-MVMTEK 388
IHRD+ +N+ +N E + DFG AR H D T T Y APE+ M +
Sbjct: 144 IHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE-MTGYVATRWYRAPEIMLNWMHYNQT 200
Query: 389 CDVYSFGVVTLEVLMGK 405
D++S G + E+L G+
Sbjct: 201 VDIWSVGCIMAELLTGR 217
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 88/197 (44%), Gaps = 10/197 (5%)
Query: 213 IGTGGYGSVYKA-QLPNGKVFALKKLHTS-EELAFIKSFKNEAQVLSQVLHRNIVKLYGY 270
+G+G YGSV A G A+KKL + + K E ++L + H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 271 CLHKKCMFLIYE-YMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSI 329
+ + + Y+ + +L+N +L ++ + L Y+H S I
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKYIH---SADI 146
Query: 330 IHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYT-MVMTEK 388
IHRD+ +N+ +N E + DFG AR H D T T Y APE+ M +
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE-MTGYVATRWYRAPEIMLNWMHYNQT 203
Query: 389 CDVYSFGVVTLEVLMGK 405
D++S G + E+L G+
Sbjct: 204 VDIWSVGCIMAELLTGR 220
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 88/197 (44%), Gaps = 10/197 (5%)
Query: 213 IGTGGYGSVYKA-QLPNGKVFALKKLHTS-EELAFIKSFKNEAQVLSQVLHRNIVKLYGY 270
+G+G YGSV A G A+KKL + + K E ++L + H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 271 CLHKKCMFLIYE-YMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSI 329
+ + + Y+ + +L+N +L ++ + L Y+H S I
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADI 146
Query: 330 IHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYT-MVMTEK 388
IHRD+ +N+ +N E + DFG AR H D T T Y APE+ M +
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE-MTGYVATRWYRAPEIMLNWMHYNQT 203
Query: 389 CDVYSFGVVTLEVLMGK 405
D++S G + E+L G+
Sbjct: 204 VDIWSVGCIMAELLTGR 220
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 93/209 (44%), Gaps = 16/209 (7%)
Query: 206 DFDIRYCIGTGGYGSV-YKAQLPNGKVFALKKLH-----TSEELAFIKSFKNEAQVLSQV 259
+F+ +G G +G V + G+ +A+K L +E+A + E +VL
Sbjct: 11 EFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLT---ENRVLQNS 67
Query: 260 LHRNIVKL-YGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHAL 318
H + L Y + H + F++ EY G LF +L + E D A+ + AL
Sbjct: 68 RHPFLTALKYSFQTHDRLCFVM-EYANGGELFFHL-SRERVFSEDRARFYGA--EIVSAL 123
Query: 319 AYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPE 378
YLH + ++++RD+ N++L+ + DFG + D + GT Y+APE
Sbjct: 124 DYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPE 181
Query: 379 LAYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
+ D + GVV E++ G+ P
Sbjct: 182 VLEDNDYGRAVDWWGLGVVMYEMMCGRLP 210
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 89/197 (45%), Gaps = 10/197 (5%)
Query: 213 IGTGGYGSVYKA-QLPNGKVFALKKLHTS-EELAFIKSFKNEAQVLSQVLHRNIVKLYGY 270
+G+G YGSV A G A+KKL + + K E ++L + H N++ L
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 112
Query: 271 CLHKKCMFLIYE-YMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSI 329
+ + + Y+ + +L+N +L ++ + L Y+H S I
Sbjct: 113 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADI 169
Query: 330 IHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYT-MVMTEK 388
IHRD+ +N+ +N E + DFG AR H D +A T Y APE+ M +
Sbjct: 170 IHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQT 226
Query: 389 CDVYSFGVVTLEVLMGK 405
D++S G + E+L G+
Sbjct: 227 VDIWSVGCIMAELLTGR 243
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 88/197 (44%), Gaps = 10/197 (5%)
Query: 213 IGTGGYGSVYKA-QLPNGKVFALKKLHTS-EELAFIKSFKNEAQVLSQVLHRNIVKLYGY 270
+G+G YGSV A G A+KKL + + K E ++L + H N++ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 271 CLHKKCMFLIYE-YMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSI 329
+ + + Y+ + +L+N +L ++ + L Y+H S I
Sbjct: 92 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADI 148
Query: 330 IHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYT-MVMTEK 388
IHRD+ +N+ +N E + DFG AR H D T T Y APE+ M +
Sbjct: 149 IHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE-MTGYVATRWYRAPEIMLNWMHYNQT 205
Query: 389 CDVYSFGVVTLEVLMGK 405
D++S G + E+L G+
Sbjct: 206 VDIWSVGCIMAELLTGR 222
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 97/213 (45%), Gaps = 26/213 (12%)
Query: 205 EDFDIRYCIGTGGYGSVYKAQ-LPNGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLH 261
+ FD +GTG +G V + +G +A+K L + +L I+ NE ++L V
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 262 RNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHA---- 317
+VKL ++++ EY+ G +F +L R + A +A
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR---------IGRFSEPHARFYAAQIV 151
Query: 318 --LAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTL-LAGTYGY 374
YLH S +I+RD+ N+L++ + V DFG A+ + RT LAGT Y
Sbjct: 152 LTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLAGTPEY 204
Query: 375 IAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
+APE+ + + D ++ GV+ E+ G P
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 89/197 (45%), Gaps = 10/197 (5%)
Query: 213 IGTGGYGSVYKA-QLPNGKVFALKKLHTS-EELAFIKSFKNEAQVLSQVLHRNIVKLYGY 270
+G+G YGSV A G A+KKL + + K E ++L + H N++ L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 271 CLHKKCMFLIYE-YMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSI 329
+ + + Y+ + +L+N +L ++ + L Y+H S I
Sbjct: 102 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADI 158
Query: 330 IHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYT-MVMTEK 388
IHRD+ +N+ +N E + DFG AR H D +A T Y APE+ M +
Sbjct: 159 IHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQT 215
Query: 389 CDVYSFGVVTLEVLMGK 405
D++S G + E+L G+
Sbjct: 216 VDIWSVGCIMAELLTGR 232
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 88/197 (44%), Gaps = 10/197 (5%)
Query: 213 IGTGGYGSVYKA-QLPNGKVFALKKLHTS-EELAFIKSFKNEAQVLSQVLHRNIVKLYGY 270
+G+G YGSV A G A+KKL + + K E ++L + H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 271 CLHKKCMFLIYE-YMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSI 329
+ + + Y+ + +L+N +L ++ + L Y+H S I
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADI 146
Query: 330 IHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYT-MVMTEK 388
IHRD+ +N+ +N E + DFG AR H D T T Y APE+ M +
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE-MTGYVATRWYRAPEIMLNWMHYNQT 203
Query: 389 CDVYSFGVVTLEVLMGK 405
D++S G + E+L G+
Sbjct: 204 VDIWSVGCIMAELLTGR 220
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 88/197 (44%), Gaps = 10/197 (5%)
Query: 213 IGTGGYGSVYKA-QLPNGKVFALKKLHTS-EELAFIKSFKNEAQVLSQVLHRNIVKLYGY 270
+G+G YGSV A G A+KKL + + K E ++L + H N++ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 271 CLHKKCMFLIYE-YMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSI 329
+ + + Y+ + +L+N +L ++ + L Y+H S I
Sbjct: 97 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADI 153
Query: 330 IHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYT-MVMTEK 388
IHRD+ +N+ +N E + DFG AR H D T T Y APE+ M +
Sbjct: 154 IHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE-MTGYVATRWYRAPEIMLNWMHYNQT 210
Query: 389 CDVYSFGVVTLEVLMGK 405
D++S G + E+L G+
Sbjct: 211 VDIWSVGCIMAELLTGR 227
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 94/201 (46%), Gaps = 10/201 (4%)
Query: 212 CIGTGGYGSVYKAQ-LPNGKVFALKKLHTSE-ELAFIKSFKNEAQVLSQVLHRNIVKLYG 269
IG G + V A+ + GK A++ + ++ + ++ E +++ + H NIVKL+
Sbjct: 21 TIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFE 80
Query: 270 YCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSI 329
+K ++L+ EY G +F L + E + + + + A+ Y H I
Sbjct: 81 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF---RQIVSAVQYCHQKF---I 134
Query: 330 IHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYTMVMTE-K 388
+HRD+ + N+LL++ + +ADFG + + G+ Y APEL +
Sbjct: 135 VHRDLKAENLLLDADMNIKIADFGFSNEF-TFGNKLDEFCGSPPYAAPELFQGKKYDGPE 193
Query: 389 CDVYSFGVVTLEVLMGKHPRD 409
DV+S GV+ ++ G P D
Sbjct: 194 VDVWSLGVILYTLVSGSLPFD 214
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 88/197 (44%), Gaps = 10/197 (5%)
Query: 213 IGTGGYGSVYKA-QLPNGKVFALKKLHTS-EELAFIKSFKNEAQVLSQVLHRNIVKLYGY 270
+G+G YGSV A G A+KKL + + K E ++L + H N++ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 271 CLHKKCMFLIYE-YMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSI 329
+ + + Y+ + +L+N +L ++ + L Y+H S I
Sbjct: 92 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADI 148
Query: 330 IHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYT-MVMTEK 388
IHRD+ +N+ +N E + DFG AR H D T T Y APE+ M +
Sbjct: 149 IHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE-MTGYVATRWYRAPEIMLNWMHYNQT 205
Query: 389 CDVYSFGVVTLEVLMGK 405
D++S G + E+L G+
Sbjct: 206 VDIWSVGCIMAELLTGR 222
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 89/197 (45%), Gaps = 10/197 (5%)
Query: 213 IGTGGYGSVYKA-QLPNGKVFALKKLHTS-EELAFIKSFKNEAQVLSQVLHRNIVKLYGY 270
+G+G YGSV A G A+KKL + + K E ++L + H N++ L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 271 CLHKKCMFLIYE-YMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSI 329
+ + + Y+ + +L+N +L ++ + L Y+H S I
Sbjct: 102 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADI 158
Query: 330 IHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYT-MVMTEK 388
IHRD+ +N+ +N E + DFG AR H D +A T Y APE+ M +
Sbjct: 159 IHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQT 215
Query: 389 CDVYSFGVVTLEVLMGK 405
D++S G + E+L G+
Sbjct: 216 VDIWSVGCIMAELLTGR 232
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 89/197 (45%), Gaps = 10/197 (5%)
Query: 213 IGTGGYGSVYKA-QLPNGKVFALKKLHTS-EELAFIKSFKNEAQVLSQVLHRNIVKLYGY 270
+G+G YGSV A G A+KKL + + K E ++L + H N++ L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 271 CLHKKCMFLIYE-YMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSI 329
+ + + Y+ + +L+N +L ++ + L Y+H S I
Sbjct: 102 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADI 158
Query: 330 IHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYT-MVMTEK 388
IHRD+ +N+ +N E + DFG AR H D +A T Y APE+ M +
Sbjct: 159 IHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQT 215
Query: 389 CDVYSFGVVTLEVLMGK 405
D++S G + E+L G+
Sbjct: 216 VDIWSVGCIMAELLTGR 232
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 93/209 (44%), Gaps = 16/209 (7%)
Query: 206 DFDIRYCIGTGGYGSV-YKAQLPNGKVFALKKLH-----TSEELAFIKSFKNEAQVLSQV 259
+F+ +G G +G V + G+ +A+K L +E+A + E +VL
Sbjct: 9 EFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLT---ENRVLQNS 65
Query: 260 LHRNIVKL-YGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHAL 318
H + L Y + H + F++ EY G LF +L + E D A+ + AL
Sbjct: 66 RHPFLTALKYSFQTHDRLCFVM-EYANGGELFFHL-SRERVFSEDRARFYGA--EIVSAL 121
Query: 319 AYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPE 378
YLH + ++++RD+ N++L+ + DFG + D + GT Y+APE
Sbjct: 122 DYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPE 179
Query: 379 LAYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
+ D + GVV E++ G+ P
Sbjct: 180 VLEDNDYGRAVDWWGLGVVMYEMMCGRLP 208
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 88/197 (44%), Gaps = 10/197 (5%)
Query: 213 IGTGGYGSVYKA-QLPNGKVFALKKLHTS-EELAFIKSFKNEAQVLSQVLHRNIVKLYGY 270
+G+G YGSV A G A+KKL + + K E ++L + H N++ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 271 CLHKKCMFLIYE-YMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSI 329
+ + + Y+ + +L+N +L ++ + L Y+H S I
Sbjct: 96 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADI 152
Query: 330 IHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYT-MVMTEK 388
IHRD+ +N+ +N E + DFG AR H D T T Y APE+ M +
Sbjct: 153 IHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE-MTGYVATRWYRAPEIMLNWMHYNQT 209
Query: 389 CDVYSFGVVTLEVLMGK 405
D++S G + E+L G+
Sbjct: 210 VDIWSVGCIMAELLTGR 226
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 88/197 (44%), Gaps = 10/197 (5%)
Query: 213 IGTGGYGSVYKA-QLPNGKVFALKKLHTS-EELAFIKSFKNEAQVLSQVLHRNIVKLYGY 270
+G+G YGSV A G A+KKL + + K E ++L + H N++ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 271 CLHKKCMFLIYE-YMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSI 329
+ + + Y+ + +L+N +L ++ + L Y+H S I
Sbjct: 96 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADI 152
Query: 330 IHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYT-MVMTEK 388
IHRD+ +N+ +N E + DFG AR H D T T Y APE+ M +
Sbjct: 153 IHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE-MTGYVATRWYRAPEIMLNWMHYNQT 209
Query: 389 CDVYSFGVVTLEVLMGK 405
D++S G + E+L G+
Sbjct: 210 VDIWSVGCIMAELLTGR 226
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 88/200 (44%), Gaps = 17/200 (8%)
Query: 213 IGTGGYG--SVYKAQLPN---GKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKL 267
+G G +G S+Y N G++ A+K L +K E +L + H +I+K
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKY 98
Query: 268 YGYC--LHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDC 325
G C + L+ EY+ GSL L + + A+ + + + +AYLH
Sbjct: 99 KGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGL----AQLLLFAQQICEGMAYLH--- 151
Query: 326 SPSIIHRDISSNNILLNSKLEAFVADFGTARLL---HADSSNRTLLAGTYGYIAPELAYT 382
+ IHRD+++ N+LL++ + DFG A+ + H R + APE
Sbjct: 152 AQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLKE 211
Query: 383 MVMTEKCDVYSFGVVTLEVL 402
DV+SFGV E+L
Sbjct: 212 YKFYYASDVWSFGVTLYELL 231
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 97/213 (45%), Gaps = 26/213 (12%)
Query: 205 EDFDIRYCIGTGGYGSVYKAQ-LPNGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLH 261
+ F+ IGTG +G V + + G +A+K L + +L I+ NE ++L V
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 262 RNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHA---- 317
+VKL ++++ EY+ G +F +L R + A +A
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR---------IGRFSEPHARFYAAQIV 151
Query: 318 --LAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTL-LAGTYGY 374
YLH S +I+RD+ N+L++ + VADFG A+ + RT L GT Y
Sbjct: 152 LTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRV----KGRTWXLCGTPEY 204
Query: 375 IAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
+APE+ + + D ++ GV+ E+ G P
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 88/197 (44%), Gaps = 10/197 (5%)
Query: 213 IGTGGYGSVYKA-QLPNGKVFALKKLHTS-EELAFIKSFKNEAQVLSQVLHRNIVKLYGY 270
+G+G YGSV A G A+KKL + + K E ++L + H N++ L
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 100
Query: 271 CLHKKCMFLIYE-YMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSI 329
+ + + Y+ + +L+N +L ++ + L Y+H S I
Sbjct: 101 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADI 157
Query: 330 IHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYT-MVMTEK 388
IHRD+ +N+ +N E + DFG AR H D T T Y APE+ M +
Sbjct: 158 IHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE-MTGYVATRWYRAPEIMLNWMHYNQT 214
Query: 389 CDVYSFGVVTLEVLMGK 405
D++S G + E+L G+
Sbjct: 215 VDIWSVGCIMAELLTGR 231
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 93/209 (44%), Gaps = 16/209 (7%)
Query: 206 DFDIRYCIGTGGYGSV-YKAQLPNGKVFALKKLH-----TSEELAFIKSFKNEAQVLSQV 259
+F+ +G G +G V + G+ +A+K L +E+A + E +VL
Sbjct: 149 EFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLT---ENRVLQNS 205
Query: 260 LHRNIVKL-YGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHAL 318
H + L Y + H + F++ EY G LF +L + E D A+ + AL
Sbjct: 206 RHPFLTALKYSFQTHDRLCFVM-EYANGGELFFHL-SRERVFSEDRARFYGA--EIVSAL 261
Query: 319 AYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPE 378
YLH + ++++RD+ N++L+ + DFG + D + GT Y+APE
Sbjct: 262 DYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPE 319
Query: 379 LAYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
+ D + GVV E++ G+ P
Sbjct: 320 VLEDNDYGRAVDWWGLGVVMYEMMCGRLP 348
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 89/197 (45%), Gaps = 10/197 (5%)
Query: 213 IGTGGYGSVYKA-QLPNGKVFALKKLHTS-EELAFIKSFKNEAQVLSQVLHRNIVKLYGY 270
+G+G YGSV A G A+KKL + + K E ++L + H N++ L
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 112
Query: 271 CLHKKCMFLIYE-YMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSI 329
+ + + Y+ + +L+N +L ++ + L Y+H S I
Sbjct: 113 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADI 169
Query: 330 IHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYT-MVMTEK 388
IHRD+ +N+ +N E + DFG AR H D +A T Y APE+ M +
Sbjct: 170 IHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMXGYVA-TRWYRAPEIMLNWMHYNQT 226
Query: 389 CDVYSFGVVTLEVLMGK 405
D++S G + E+L G+
Sbjct: 227 VDIWSVGCIMAELLTGR 243
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 93/209 (44%), Gaps = 16/209 (7%)
Query: 206 DFDIRYCIGTGGYGSV-YKAQLPNGKVFALKKLH-----TSEELAFIKSFKNEAQVLSQV 259
+F+ +G G +G V + G+ +A+K L +E+A + E +VL
Sbjct: 152 EFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLT---ENRVLQNS 208
Query: 260 LHRNIVKL-YGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHAL 318
H + L Y + H + F++ EY G LF +L + E D A+ + AL
Sbjct: 209 RHPFLTALKYSFQTHDRLCFVM-EYANGGELFFHL-SRERVFSEDRARFYGA--EIVSAL 264
Query: 319 AYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPE 378
YLH + ++++RD+ N++L+ + DFG + D + GT Y+APE
Sbjct: 265 DYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPE 322
Query: 379 LAYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
+ D + GVV E++ G+ P
Sbjct: 323 VLEDNDYGRAVDWWGLGVVMYEMMCGRLP 351
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 90/219 (41%), Gaps = 32/219 (14%)
Query: 206 DFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIV 265
DF+ +G G +G V L +EEL IK K + + + +V
Sbjct: 20 DFNFLMVLGKGSFGKV-----------MLADRKGTEELYAIKILKKDVVIQDDDVECTMV 68
Query: 266 KLYGYCLHKKCMFL---------------IYEYMERGSLFCNLHNNEDAVELDWAKRVNI 310
+ L K FL + EY+ G L +++ + + + V
Sbjct: 69 EKRVLALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDL---MYHIQQVGKFKEPQAVFY 125
Query: 311 VKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAG 370
++ L +LH II+RD+ +N++L+S+ +ADFG + D G
Sbjct: 126 AAEISIGLFFLH---KRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTREFCG 182
Query: 371 TYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRD 409
T YIAPE+ + D +++GV+ E+L G+ P D
Sbjct: 183 TPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFD 221
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 91/203 (44%), Gaps = 21/203 (10%)
Query: 213 IGTGGYGSVYKAQ-LPNGKVFALKKLHTSEELAFIKSFK-NEAQVLSQVLHRNIVKLYGY 270
+G G +G V++ + G A+KK+ ++ F+ E + + IV LYG
Sbjct: 82 LGRGSFGEVHRMEDKQTGFQCAVKKVR-------LEVFRAEELMACAGLTSPRIVPLYGA 134
Query: 271 CLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSII 330
+ + E +E GSL L + + D + + + L YLH S I+
Sbjct: 135 VREGPWVNIFMELLEGGSLG-QLVKEQGCLPED--RALYYLGQALEGLEYLH---SRRIL 188
Query: 331 HRDISSNNILLNS-KLEAFVADFGTARLLHADSSNRTLLAGTY-----GYIAPELAYTMV 384
H D+ ++N+LL+S A + DFG A L D + LL G Y ++APE+
Sbjct: 189 HGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGRS 248
Query: 385 MTEKCDVYSFGVVTLEVLMGKHP 407
K DV+S + L +L G HP
Sbjct: 249 CDAKVDVWSSCCMMLHMLNGCHP 271
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 93/209 (44%), Gaps = 16/209 (7%)
Query: 206 DFDIRYCIGTGGYGSV-YKAQLPNGKVFALKKLH-----TSEELAFIKSFKNEAQVLSQV 259
+F+ +G G +G V + G+ +A+K L +E+A + E +VL
Sbjct: 10 EFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLT---ENRVLQNS 66
Query: 260 LHRNIVKL-YGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHAL 318
H + L Y + H + F++ EY G LF +L + E D A+ + AL
Sbjct: 67 RHPFLTALKYSFQTHDRLCFVM-EYANGGELFFHL-SRERVFSEDRARFYGA--EIVSAL 122
Query: 319 AYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPE 378
YLH + ++++RD+ N++L+ + DFG + D + GT Y+APE
Sbjct: 123 DYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPE 180
Query: 379 LAYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
+ D + GVV E++ G+ P
Sbjct: 181 VLEDNDYGRAVDWWGLGVVMYEMMCGRLP 209
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 95/213 (44%), Gaps = 19/213 (8%)
Query: 213 IGTGGYGSVYKA------QLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHR-NIV 265
+G G +G V +A + + A+K L + ++ +E ++L + H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 266 KLYGYCLHKKC-MFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAY---- 320
L G C + +I E+ + G+L L + + + + + H + Y
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEF-VPYKDLYKDFLTLEHLIXYSFQV 153
Query: 321 ---LHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSS--NRTLLAGTYGYI 375
+ S IHRD+++ NILL+ K + DFG AR ++ D + ++
Sbjct: 154 AKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLKWM 213
Query: 376 APELAYTMVMTEKCDVYSFGVVTLEVL-MGKHP 407
APE + V T + DV+SFGV+ E+ +G P
Sbjct: 214 APETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 246
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 95/213 (44%), Gaps = 19/213 (8%)
Query: 213 IGTGGYGSVYKA------QLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHR-NIV 265
+G G +G V +A + + A+K L + ++ +E ++L + H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 266 KLYGYCLHKKC-MFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAY---- 320
L G C + +I E+ + G+L L + + + + + H + Y
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEF-VPYKDLYKDFLTLEHLICYSFQV 153
Query: 321 ---LHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSS--NRTLLAGTYGYI 375
+ S IHRD+++ NILL+ K + DFG AR ++ D + ++
Sbjct: 154 AKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWM 213
Query: 376 APELAYTMVMTEKCDVYSFGVVTLEVL-MGKHP 407
APE + V T + DV+SFGV+ E+ +G P
Sbjct: 214 APETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 246
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 91/199 (45%), Gaps = 14/199 (7%)
Query: 213 IGTGGYGSV---YKAQLPNGKVFALKKLHTS-EELAFIKSFKNEAQVLSQVLHRNIVKLY 268
+G+G YGSV Y A+L KV A+KKL + L + E ++L + H N++ L
Sbjct: 36 VGSGAYGSVCSAYDARL-RQKV-AVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 269 GYCLHKKCMFLIYE-YMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSP 327
+ E Y+ + +L+N L +V + L Y+H S
Sbjct: 94 DVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIH---SA 150
Query: 328 SIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYT-MVMT 386
IIHRD+ +N+ +N E + DFG AR AD +A T Y APE+ M
Sbjct: 151 GIIHRDLKPSNVAVNEDSELRILDFGLAR--QADEEMTGYVA-TRWYRAPEIMLNWMHYN 207
Query: 387 EKCDVYSFGVVTLEVLMGK 405
+ D++S G + E+L GK
Sbjct: 208 QTVDIWSVGCIMAELLQGK 226
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 90/205 (43%), Gaps = 22/205 (10%)
Query: 213 IGTGGYGSVYKAQLPNGKV-FALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYC 271
IG G YG V A KV A+KK+ E + + E ++L H NI+ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDII 92
Query: 272 L-----HKKCMFLIYEYMERG--SLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHD 324
K ++++ + ME L H + D + + + L Y+H
Sbjct: 93 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI-------CYFLYQILRGLKYIH-- 143
Query: 325 CSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLA---GTYGYIAPELAY 381
S +++HRD+ +N+LLN+ + + DFG AR+ D + L T Y APE+
Sbjct: 144 -SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 202
Query: 382 -TMVMTEKCDVYSFGVVTLEVLMGK 405
+ T+ D++S G + E+L +
Sbjct: 203 NSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 88/197 (44%), Gaps = 10/197 (5%)
Query: 213 IGTGGYGSVYKA-QLPNGKVFALKKLHTS-EELAFIKSFKNEAQVLSQVLHRNIVKLYGY 270
+G+G YGSV A G A+KKL + + K E ++L + H N++ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 271 CLHKKCMFLIYE-YMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSI 329
+ + + Y+ + +L+N +L ++ + L Y+H S I
Sbjct: 92 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADI 148
Query: 330 IHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYT-MVMTEK 388
IHRD+ +N+ +N E + DFG AR H D T T Y APE+ M +
Sbjct: 149 IHRDLKPSNLAVNEDSELKILDFGLAR--HTDDE-MTGYVATRWYRAPEIMLNWMHYNQT 205
Query: 389 CDVYSFGVVTLEVLMGK 405
D++S G + E+L G+
Sbjct: 206 VDIWSVGCIMAELLTGR 222
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 110/279 (39%), Gaps = 39/279 (13%)
Query: 205 EDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNI 264
E +I IG G +G VY + L + E +K+FK E Q H N+
Sbjct: 33 EQLEIGELIGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQ-LKAFKREVMAYRQTRHENV 91
Query: 265 VKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHD 324
V G C+ + +I + +L+ + + + + LD K I + + + YLH
Sbjct: 92 VLFMGACMSPPHLAIITSLCKGRTLYSVVRDAK--IVLDVNKTRQIAQEIVKGMGYLH-- 147
Query: 325 CSPSIIHRDISSNNILLNSKLEAFVADFG---TARLLHADSSNRTLLA--GTYGYIAPEL 379
+ I+H+D+ S N+ ++ + + DFG + +L A L G ++APE+
Sbjct: 148 -AKGILHKDLKSKNVFYDNG-KVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEI 205
Query: 380 AYTMV---------MTEKCDVYSFGVVTLEVLMGKHPRDIXXXXXXXXDPKIMLIDVLDQ 430
+ ++ DV++ G + E+ + P P +I +
Sbjct: 206 IRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWP--------FKTQPAEAIIWQMGT 257
Query: 431 RLPPPVDR----KVIRDILLISTVSFACLQSNPKSRPTM 465
+ P + + K I DILL C + RPT
Sbjct: 258 GMKPNLSQIGMGKEISDILLF------CWAFEQEERPTF 290
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 91/205 (44%), Gaps = 22/205 (10%)
Query: 213 IGTGGYGSVYKAQLPNGKV-FALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYC 271
IG G YG V A KV A++K+ E + + E ++L + H NI+ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 272 L-----HKKCMFLIYEYMERG--SLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHD 324
K ++++ + ME L H + D + + + L Y+H
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI-------CYFLYQILRGLKYIH-- 145
Query: 325 CSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLA---GTYGYIAPELAY 381
S +++HRD+ +N+LLN+ + + DFG AR+ D + L T Y APE+
Sbjct: 146 -SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 204
Query: 382 -TMVMTEKCDVYSFGVVTLEVLMGK 405
+ T+ D++S G + E+L +
Sbjct: 205 NSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 91/205 (44%), Gaps = 22/205 (10%)
Query: 213 IGTGGYGSVYKAQLPNGKV-FALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYC 271
IG G YG V A KV A+KK+ E + + E ++L + H NI+ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 272 L-----HKKCMFLIYEYMERG--SLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHD 324
K ++++ + ME L H + D + + + L Y+H
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHI-------CYFLYQILRGLKYIH-- 145
Query: 325 CSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLA---GTYGYIAPELAY 381
S +++HRD+ +N+LLN+ + + DFG AR+ D + L T Y APE+
Sbjct: 146 -SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 204
Query: 382 -TMVMTEKCDVYSFGVVTLEVLMGK 405
+ T+ D++S G + E+L +
Sbjct: 205 NSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 110/235 (46%), Gaps = 31/235 (13%)
Query: 190 NYDGRIVYEDLIEATEDFDIRYCIGTGGYGSVYKA-QLPNGKVFALKKLHTSEELAFIKS 248
++ GR +ED+ + ED +G G + V L + +A+K + +
Sbjct: 5 SFSGR--FEDVYQLQEDV-----LGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRV 57
Query: 249 FKNEAQVLSQVL-HRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKR 307
F+ E ++L Q HRN+++L + + +L++E M GS+ ++H EL+ +
Sbjct: 58 FR-EVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASV- 115
Query: 308 VNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLN-----SKLEAFVADFGTARLLHADS 362
+V+ +A AL +LH+ I HRD+ NIL S ++ D G+ L+ D
Sbjct: 116 --VVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDC 170
Query: 363 ---SNRTLL--AGTYGYIAPELAYTM-----VMTEKCDVYSFGVVTLEVLMGKHP 407
S LL G+ Y+APE+ + ++CD++S GV+ +L G P
Sbjct: 171 SPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPP 225
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 92/204 (45%), Gaps = 26/204 (12%)
Query: 213 IGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYC 271
+G G Y +VYK + + ALK++ E + E +L + H NIV L+
Sbjct: 10 LGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDII 69
Query: 272 LHKKCMFLIYEYMER---------GSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLH 322
+K + L++EY+++ G++ N+HN V+L + + LAY H
Sbjct: 70 HTEKSLTLVFEYLDKDLKQYLDDCGNII-NMHN----VKL-------FLFQLLRGLAYCH 117
Query: 323 HDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPE-LAY 381
++HRD+ N+L+N + E +ADFG AR + T Y P+ L
Sbjct: 118 RQ---KVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILLG 174
Query: 382 TMVMTEKCDVYSFGVVTLEVLMGK 405
+ + + D++ G + E+ G+
Sbjct: 175 STDYSTQIDMWGVGCIFYEMATGR 198
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 88/197 (44%), Gaps = 10/197 (5%)
Query: 213 IGTGGYGSVYKA-QLPNGKVFALKKLHTS-EELAFIKSFKNEAQVLSQVLHRNIVKLYGY 270
+G+G YGSV A G A+KKL + + K E ++L + H N++ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 271 CLHKKCMFLIYE-YMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSI 329
+ + + Y+ + +L+N +L ++ + L Y+H S I
Sbjct: 96 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADI 152
Query: 330 IHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYT-MVMTEK 388
IHRD+ +N+ +N E + DFG AR H D T T Y APE+ M +
Sbjct: 153 IHRDLKPSNLAVNEDSELKILDFGLAR--HTDDE-MTGYVATRWYRAPEIMLNWMHYNQT 209
Query: 389 CDVYSFGVVTLEVLMGK 405
D++S G + E+L G+
Sbjct: 210 VDIWSVGCIMAELLTGR 226
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 88/197 (44%), Gaps = 10/197 (5%)
Query: 213 IGTGGYGSVYKA-QLPNGKVFALKKLHTS-EELAFIKSFKNEAQVLSQVLHRNIVKLYGY 270
+G+G YGSV A G A+KKL + + K E ++L + H N++ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 271 CLHKKCMFLIYE-YMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSI 329
+ + + Y+ + +L+N +L ++ + L Y+H S I
Sbjct: 96 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADI 152
Query: 330 IHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYT-MVMTEK 388
IHRD+ +N+ +N E + DFG AR H D T T Y APE+ M +
Sbjct: 153 IHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE-MTGYVATRWYRAPEIMLNWMHYNQT 209
Query: 389 CDVYSFGVVTLEVLMGK 405
D++S G + E+L G+
Sbjct: 210 VDIWSVGCIMAELLTGR 226
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 90/200 (45%), Gaps = 17/200 (8%)
Query: 213 IGTGGYG--SVYKAQLPN---GKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKL 267
+G G +G S+Y N G++ A+K L +K E +L + H +I+K
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 268 YGYCLHK--KCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDC 325
G C + K + L+ EY+ GSL L + + A+ + + + +AYLH
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGL----AQLLLFAQQICEGMAYLH--- 134
Query: 326 SPSIIHRDISSNNILLNSKLEAFVADFGTARLL---HADSSNRTLLAGTYGYIAPELAYT 382
+ IHR++++ N+LL++ + DFG A+ + H R + APE
Sbjct: 135 AQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKE 194
Query: 383 MVMTEKCDVYSFGVVTLEVL 402
DV+SFGV E+L
Sbjct: 195 YKFYYASDVWSFGVTLYELL 214
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 92/211 (43%), Gaps = 17/211 (8%)
Query: 207 FDIRYCIGTGGYGSVYKAQLPN------GKVFALKKLHTSEELAFIKSFKNEAQVLSQVL 260
+D +G+G + V K + + K ++ +S + + E +L ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 261 HRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAY 320
H N++ L+ +K + LI E + G LF L E E + +K + + + Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE---EEATEFLKQILNGVYY 129
Query: 321 LHHDCSPSIIHRDISSNNILLNS----KLEAFVADFGTARLLHADSSNRTLLAGTYGYIA 376
LH S I H D+ NI+L K + DFG A + + + + GT ++A
Sbjct: 130 LH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF-GTPAFVA 185
Query: 377 PELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
PE+ + + D++S GV+T +L G P
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 103/219 (47%), Gaps = 23/219 (10%)
Query: 205 EDFDIRYCIGTGGYGSVYKA-QLPNGKVFALKKL-------HTSEELAFIKSFK-NEAQV 255
E+++ + +G G V + P K +A+K + ++EE+ ++ E +
Sbjct: 17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 76
Query: 256 LSQVL-HRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAM 314
L +V H NI++L FL+++ M++G LF L + V L + I++A+
Sbjct: 77 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL---TEKVTLSEKETRKIMRAL 133
Query: 315 AHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGY 374
+ LH +I+HRD+ NILL+ + + DFG + L R+ + GT Y
Sbjct: 134 LEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRS-VCGTPSY 189
Query: 375 IAPELAYTMV------MTEKCDVYSFGVVTLEVLMGKHP 407
+APE+ + ++ D++S GV+ +L G P
Sbjct: 190 LAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 228
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 90/205 (43%), Gaps = 22/205 (10%)
Query: 213 IGTGGYGSVYKAQLPNGKV-FALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYC 271
IG G YG V A KV A+KK+ E + + E ++L H NI+ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDII 92
Query: 272 L-----HKKCMFLIYEYMERG--SLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHD 324
K ++++ + ME L H + D + + + L Y+H
Sbjct: 93 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI-------CYFLYQILRGLKYIH-- 143
Query: 325 CSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLA---GTYGYIAPELAY 381
S +++HRD+ +N+LLN+ + + DFG AR+ D + L T Y APE+
Sbjct: 144 -SANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 202
Query: 382 -TMVMTEKCDVYSFGVVTLEVLMGK 405
+ T+ D++S G + E+L +
Sbjct: 203 NSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 91/201 (45%), Gaps = 10/201 (4%)
Query: 212 CIGTGGYGSVYKAQ-LPNGKVFALKKLHTSE-ELAFIKSFKNEAQVLSQVLHRNIVKLYG 269
IG G + V A+ + GK A+K + ++ + ++ E ++ + H NIVKL+
Sbjct: 21 TIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLFE 80
Query: 270 YCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSI 329
+K ++L+ EY G +F L + E + + + + A+ Y H I
Sbjct: 81 VIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKF---RQIVSAVQYCHQKF---I 134
Query: 330 IHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYTMVMTE-K 388
+HRD+ + N+LL++ +ADFG + + G Y APEL +
Sbjct: 135 VHRDLKAENLLLDADXNIKIADFGFSNEF-TFGNKLDAFCGAPPYAAPELFQGKKYDGPE 193
Query: 389 CDVYSFGVVTLEVLMGKHPRD 409
DV+S GV+ ++ G P D
Sbjct: 194 VDVWSLGVILYTLVSGSLPFD 214
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 88/197 (44%), Gaps = 10/197 (5%)
Query: 213 IGTGGYGSVYKA-QLPNGKVFALKKLHTS-EELAFIKSFKNEAQVLSQVLHRNIVKLYGY 270
+G+G YGSV A G A+KKL + + K E ++L + H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 271 CLHKKCMFLIYE-YMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSI 329
+ + + Y+ + +L+N +L ++ + L Y+H S I
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADI 146
Query: 330 IHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYT-MVMTEK 388
IHRD+ +N+ +N E + D+G AR H D T T Y APE+ M +
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDYGLAR--HTDDE-MTGYVATRWYRAPEIMLNWMHYNQT 203
Query: 389 CDVYSFGVVTLEVLMGK 405
D++S G + E+L G+
Sbjct: 204 VDIWSVGCIMAELLTGR 220
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 102/219 (46%), Gaps = 23/219 (10%)
Query: 205 EDFDIRYCIGTGGYGSVYKA-QLPNGKVFALKKL-------HTSEELAFIKSFK-NEAQV 255
E+++ + +G G V + P K +A+K + ++EE+ ++ E +
Sbjct: 4 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 63
Query: 256 LSQVL-HRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAM 314
L +V H NI++L FL+++ M++G LF L + V L + I++A+
Sbjct: 64 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL---TEKVTLSEKETRKIMRAL 120
Query: 315 AHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGY 374
+ LH +I+HRD+ NILL+ + + DFG + L R + GT Y
Sbjct: 121 LEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRE-VCGTPSY 176
Query: 375 IAPELAYTMV------MTEKCDVYSFGVVTLEVLMGKHP 407
+APE+ + ++ D++S GV+ +L G P
Sbjct: 177 LAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 215
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 97/216 (44%), Gaps = 23/216 (10%)
Query: 213 IGTGGYGSVYKA------QLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHR-NIV 265
+G G +G V +A + + A+K L + ++ +E ++L + H N+V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 266 KLYGYCLHKKC-MFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVK---AMAHALAY- 320
L G C + +I E+ + G+L L + + E K ++ K + H + Y
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRN--EFVPYKPEDLYKDFLTLEHLIXYS 154
Query: 321 ------LHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSS--NRTLLAGTY 372
+ S IHRD+++ NILL+ K + DFG AR + D +
Sbjct: 155 FQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPL 214
Query: 373 GYIAPELAYTMVMTEKCDVYSFGVVTLEVL-MGKHP 407
++APE + V T + DV+SFGV+ E+ +G P
Sbjct: 215 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 250
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 110/235 (46%), Gaps = 31/235 (13%)
Query: 190 NYDGRIVYEDLIEATEDFDIRYCIGTGGYGSVYKA-QLPNGKVFALKKLHTSEELAFIKS 248
++ GR +ED+ + ED +G G + V L + +A+K + +
Sbjct: 5 SFSGR--FEDVYQLQEDV-----LGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRV 57
Query: 249 FKNEAQVLSQVL-HRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKR 307
F+ E ++L Q HRN+++L + + +L++E M GS+ ++H EL+ +
Sbjct: 58 FR-EVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASV- 115
Query: 308 VNIVKAMAHALAYLHHDCSPSIIHRDISSNNILL---NSKLEAFVADF--GTARLLHADS 362
+V+ +A AL +LH+ I HRD+ NIL N + DF G+ L+ D
Sbjct: 116 --VVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDC 170
Query: 363 ---SNRTLL--AGTYGYIAPELAYTM-----VMTEKCDVYSFGVVTLEVLMGKHP 407
S LL G+ Y+APE+ + ++CD++S GV+ +L G P
Sbjct: 171 SPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPP 225
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 94/204 (46%), Gaps = 20/204 (9%)
Query: 213 IGTGGYGSVYKAQL-PNGKVFALKKLHT-------SEELAFIKSFKNEAQVLSQVLHRNI 264
+G GG+G V Q+ GK++A KKL E +A NE Q+L +V R +
Sbjct: 192 LGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMAL-----NEKQILEKVNSRFV 246
Query: 265 VKL-YGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHH 323
V L Y Y K + L+ M G L ++++ A A+ V + L LH
Sbjct: 247 VSLAYAY-ETKDALCLVLTLMNGGDLKFHIYHMGQAG-FPEARAVFYAAEICCGLEDLHR 304
Query: 324 DCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYTM 383
+ I++RD+ NILL+ ++D G A + + + + GT GY+APE+
Sbjct: 305 E---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRV-GTVGYMAPEVVKNE 360
Query: 384 VMTEKCDVYSFGVVTLEVLMGKHP 407
T D ++ G + E++ G+ P
Sbjct: 361 RYTFSPDWWALGCLLYEMIAGQSP 384
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 110/263 (41%), Gaps = 46/263 (17%)
Query: 167 KRKYKKPKL-------EERATNNIDVFSIWNYDGRIVYEDLIEATEDFDIRYCIGTGGYG 219
++K+++ K+ EE+ N I F N R D ++ T DF+ +G G +G
Sbjct: 303 RQKFERAKIGQGTKAPEEKTANTISKFD--NNGNR----DRMKLT-DFNFLMVLGKGSFG 355
Query: 220 SVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEA-----QVLSQVLHRNIVKLYGY---- 270
V L + ++EL +K K + V ++ + ++ L G
Sbjct: 356 KV-----------MLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFL 404
Query: 271 -----CLHK-KCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHD 324
C ++ + EY+ G L +++ + V +A L +L
Sbjct: 405 TQLHSCFQTMDRLYFVMEYVNGGDL---MYHIQQVGRFKEPHAVFYAAEIAIGLFFLQ-- 459
Query: 325 CSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYTMV 384
S II+RD+ +N++L+S+ +ADFG + D GT YIAPE+
Sbjct: 460 -SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQP 518
Query: 385 MTEKCDVYSFGVVTLEVLMGKHP 407
+ D ++FGV+ E+L G+ P
Sbjct: 519 YGKSVDWWAFGVLLYEMLAGQAP 541
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 96/216 (44%), Gaps = 21/216 (9%)
Query: 213 IGTGGYGSVYKA------QLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHR-NIV 265
+G G +G V +A + + A+K L + ++ +E ++L + H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 266 KLYGYCLHKKC-MFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVK---AMAHALAY- 320
L G C + +I E+ + G+L L + + ++ K + H + Y
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 321 ------LHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSS--NRTLLAGTY 372
+ S IHRD+++ NILL+ K + DFG AR ++ D +
Sbjct: 155 FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDARLPL 214
Query: 373 GYIAPELAYTMVMTEKCDVYSFGVVTLEVL-MGKHP 407
++APE + V T + DV+SFGV+ E+ +G P
Sbjct: 215 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 250
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 92/211 (43%), Gaps = 17/211 (8%)
Query: 207 FDIRYCIGTGGYGSVYKAQLPN------GKVFALKKLHTSEELAFIKSFKNEAQVLSQVL 260
+D +G+G + V K + + K ++ +S + + E +L ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 261 HRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAY 320
H N++ L+ +K + LI E + G LF L E E + +K + + + Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE---EEATEFLKQILNGVYY 129
Query: 321 LHHDCSPSIIHRDISSNNILLNS----KLEAFVADFGTARLLHADSSNRTLLAGTYGYIA 376
LH S I H D+ NI+L K + DFG A + + + + GT ++A
Sbjct: 130 LH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF-GTPEFVA 185
Query: 377 PELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
PE+ + + D++S GV+T +L G P
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 88/197 (44%), Gaps = 10/197 (5%)
Query: 213 IGTGGYGSVYKA-QLPNGKVFALKKLHTS-EELAFIKSFKNEAQVLSQVLHRNIVKLYGY 270
+G+G YGSV A G A+KKL + + K E ++L + H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 271 CLHKKCMFLIYE-YMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSI 329
+ + + Y+ + +L+N + +L ++ + L Y+H S I
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQFLIYQILRGLKYIH---SADI 146
Query: 330 IHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYT-MVMTEK 388
IHRD+ +N+ +N E + DFG R H D T T Y APE+ M +
Sbjct: 147 IHRDLKPSNLAVNEDSELKILDFGLCR--HTDDE-MTGYVATRWYRAPEIMLNWMHYNQT 203
Query: 389 CDVYSFGVVTLEVLMGK 405
D++S G + E+L G+
Sbjct: 204 VDIWSVGCIMAELLTGR 220
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 94/204 (46%), Gaps = 20/204 (9%)
Query: 213 IGTGGYGSVYKAQL-PNGKVFALKKLHT-------SEELAFIKSFKNEAQVLSQVLHRNI 264
+G GG+G V Q+ GK++A KKL E +A NE Q+L +V R +
Sbjct: 192 LGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMAL-----NEKQILEKVNSRFV 246
Query: 265 VKL-YGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHH 323
V L Y Y K + L+ M G L ++++ A A+ V + L LH
Sbjct: 247 VSLAYAY-ETKDALCLVLTLMNGGDLKFHIYHMGQAG-FPEARAVFYAAEICCGLEDLHR 304
Query: 324 DCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYTM 383
+ I++RD+ NILL+ ++D G A + + + + GT GY+APE+
Sbjct: 305 E---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRV-GTVGYMAPEVVKNE 360
Query: 384 VMTEKCDVYSFGVVTLEVLMGKHP 407
T D ++ G + E++ G+ P
Sbjct: 361 RYTFSPDWWALGCLLYEMIAGQSP 384
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 92/211 (43%), Gaps = 17/211 (8%)
Query: 207 FDIRYCIGTGGYGSVYKAQLPN------GKVFALKKLHTSEELAFIKSFKNEAQVLSQVL 260
+D +G+G + V K + + K ++ +S + + E +L ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 261 HRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAY 320
H N++ L+ +K + LI E + G LF L E E + +K + + + Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE---EEATEFLKQILNGVYY 129
Query: 321 LHHDCSPSIIHRDISSNNILLNS----KLEAFVADFGTARLLHADSSNRTLLAGTYGYIA 376
LH S I H D+ NI+L K + DFG A + + + + GT ++A
Sbjct: 130 LH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF-GTPEFVA 185
Query: 377 PELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
PE+ + + D++S GV+T +L G P
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 92/211 (43%), Gaps = 17/211 (8%)
Query: 207 FDIRYCIGTGGYGSVYKAQLPN------GKVFALKKLHTSEELAFIKSFKNEAQVLSQVL 260
+D +G+G + V K + + K ++ +S + + E +L ++
Sbjct: 13 YDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 261 HRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAY 320
H N++ L+ +K + LI E + G LF L E E + +K + + + Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE---EEATEFLKQILNGVYY 129
Query: 321 LHHDCSPSIIHRDISSNNILLNS----KLEAFVADFGTARLLHADSSNRTLLAGTYGYIA 376
LH S I H D+ NI+L K + DFG A + + + + GT ++A
Sbjct: 130 LH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF-GTPEFVA 185
Query: 377 PELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
PE+ + + D++S GV+T +L G P
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 92/211 (43%), Gaps = 17/211 (8%)
Query: 207 FDIRYCIGTGGYGSVYKAQLPN------GKVFALKKLHTSEELAFIKSFKNEAQVLSQVL 260
+D +G+G + V K + + K ++ +S + + E +L ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 261 HRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAY 320
H N++ L+ +K + LI E + G LF L E E + +K + + + Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE---EEATEFLKQILNGVYY 129
Query: 321 LHHDCSPSIIHRDISSNNILLNS----KLEAFVADFGTARLLHADSSNRTLLAGTYGYIA 376
LH S I H D+ NI+L K + DFG A + + + + GT ++A
Sbjct: 130 LH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF-GTPEFVA 185
Query: 377 PELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
PE+ + + D++S GV+T +L G P
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 92/211 (43%), Gaps = 17/211 (8%)
Query: 207 FDIRYCIGTGGYGSVYKAQLPN------GKVFALKKLHTSEELAFIKSFKNEAQVLSQVL 260
+D +G+G + V K + + K ++ +S + + E +L ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 261 HRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAY 320
H N++ L+ +K + LI E + G LF L E E + +K + + + Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE---EEATEFLKQILNGVYY 129
Query: 321 LHHDCSPSIIHRDISSNNILLNS----KLEAFVADFGTARLLHADSSNRTLLAGTYGYIA 376
LH S I H D+ NI+L K + DFG A + + + + GT ++A
Sbjct: 130 LH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF-GTPEFVA 185
Query: 377 PELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
PE+ + + D++S GV+T +L G P
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 92/211 (43%), Gaps = 17/211 (8%)
Query: 207 FDIRYCIGTGGYGSVYKAQLPN------GKVFALKKLHTSEELAFIKSFKNEAQVLSQVL 260
+D +G+G + V K + + K ++ +S + + E +L ++
Sbjct: 12 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 71
Query: 261 HRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAY 320
H N++ L+ +K + LI E + G LF L E E + +K + + + Y
Sbjct: 72 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE---EEATEFLKQILNGVYY 128
Query: 321 LHHDCSPSIIHRDISSNNILLNS----KLEAFVADFGTARLLHADSSNRTLLAGTYGYIA 376
LH S I H D+ NI+L K + DFG A + + + + GT ++A
Sbjct: 129 LH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF-GTPEFVA 184
Query: 377 PELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
PE+ + + D++S GV+T +L G P
Sbjct: 185 PEIVNYEPLGLEADMWSIGVITYILLSGASP 215
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 92/211 (43%), Gaps = 17/211 (8%)
Query: 207 FDIRYCIGTGGYGSVYKAQLPN------GKVFALKKLHTSEELAFIKSFKNEAQVLSQVL 260
+D +G+G + V K + + K ++ +S + + E +L ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 261 HRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAY 320
H N++ L+ +K + LI E + G LF L E E + +K + + + Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE---EEATEFLKQILNGVYY 129
Query: 321 LHHDCSPSIIHRDISSNNILLNS----KLEAFVADFGTARLLHADSSNRTLLAGTYGYIA 376
LH S I H D+ NI+L K + DFG A + + + + GT ++A
Sbjct: 130 LH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF-GTPEFVA 185
Query: 377 PELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
PE+ + + D++S GV+T +L G P
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 96/216 (44%), Gaps = 21/216 (9%)
Query: 213 IGTGGYGSVYKA------QLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHR-NIV 265
+G G +G V +A + + A+K L + ++ +E ++L + H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 266 KLYGYCLHKKC-MFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVK---AMAHALAY- 320
L G C + +I E+ + G+L L + + ++ K + H + Y
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 321 ------LHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSS--NRTLLAGTY 372
+ S IHRD+++ NILL+ K + DFG AR ++ D +
Sbjct: 155 FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 214
Query: 373 GYIAPELAYTMVMTEKCDVYSFGVVTLEVL-MGKHP 407
++APE + V T + DV+SFGV+ E+ +G P
Sbjct: 215 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 250
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 96/216 (44%), Gaps = 21/216 (9%)
Query: 213 IGTGGYGSVYKA------QLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHR-NIV 265
+G G +G V +A + + A+K L + ++ +E ++L + H N+V
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 131
Query: 266 KLYGYCLHKKC-MFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVK---AMAHALAY- 320
L G C + +I E+ + G+L L + + ++ K + H + Y
Sbjct: 132 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 191
Query: 321 ------LHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSS--NRTLLAGTY 372
+ S IHRD+++ NILL+ K + DFG AR ++ D +
Sbjct: 192 FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 251
Query: 373 GYIAPELAYTMVMTEKCDVYSFGVVTLEVL-MGKHP 407
++APE + V T + DV+SFGV+ E+ +G P
Sbjct: 252 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 287
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 95/212 (44%), Gaps = 24/212 (11%)
Query: 205 EDFDIRYCIGTGGYGSVYKAQ-LPNGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLH 261
+ FD +GTG +G V + +G +A+K L + +L I+ NE ++L V
Sbjct: 28 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 87
Query: 262 RNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHA---- 317
+VKL ++++ EY+ G +F +L R + A +A
Sbjct: 88 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR---------IGRFSEPHARFYAAQIV 138
Query: 318 --LAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYI 375
YLH S +I+RD+ N+L++ + V DFG A+ + + L GT Y+
Sbjct: 139 LTFEYLH---SLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGRT---WXLCGTPEYL 192
Query: 376 APELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
APE+ + + D ++ GV+ E+ G P
Sbjct: 193 APEIILSKGYNKAVDWWALGVLIYEMAAGYPP 224
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 87/197 (44%), Gaps = 10/197 (5%)
Query: 213 IGTGGYGSVYKA-QLPNGKVFALKKLHTS-EELAFIKSFKNEAQVLSQVLHRNIVKLYGY 270
+G+G YGSV A G A+KKL + + K E ++L + H N++ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 271 CLHKKCMFLIYE-YMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSI 329
+ + + Y+ + +L+N +L ++ + L Y+H S I
Sbjct: 97 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADI 153
Query: 330 IHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYT-MVMTEK 388
IHRD+ +N+ +N E + DFG AR + T T Y APE+ M +
Sbjct: 154 IHRDLKPSNLAVNEDCELKILDFGLAR---HTADEMTGYVATRWYRAPEIMLNWMHYNQT 210
Query: 389 CDVYSFGVVTLEVLMGK 405
D++S G + E+L G+
Sbjct: 211 VDIWSVGCIMAELLTGR 227
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 92/211 (43%), Gaps = 17/211 (8%)
Query: 207 FDIRYCIGTGGYGSVYKAQLPN------GKVFALKKLHTSEELAFIKSFKNEAQVLSQVL 260
+D +G+G + V K + + K ++ +S + + E +L ++
Sbjct: 12 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 71
Query: 261 HRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAY 320
H N++ L+ +K + LI E + G LF L E E + +K + + + Y
Sbjct: 72 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE---EEATEFLKQILNGVYY 128
Query: 321 LHHDCSPSIIHRDISSNNILLNS----KLEAFVADFGTARLLHADSSNRTLLAGTYGYIA 376
LH S I H D+ NI+L K + DFG A + + + + GT ++A
Sbjct: 129 LH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF-GTPEFVA 184
Query: 377 PELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
PE+ + + D++S GV+T +L G P
Sbjct: 185 PEIVNYEPLGLEADMWSIGVITYILLSGASP 215
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 96/213 (45%), Gaps = 26/213 (12%)
Query: 205 EDFDIRYCIGTGGYGSVYKAQ-LPNGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLH 261
+ FD +GTG +G V + +G +A+K L + +L I+ NE ++L V
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 262 RNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHA---- 317
+VKL ++++ EY+ G +F +L R + A +A
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR---------IGRFSEPHARFYAAQIV 151
Query: 318 --LAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTL-LAGTYGY 374
YLH S +I+RD+ N+L++ + V DFG A+ + RT L GT Y
Sbjct: 152 LTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEY 204
Query: 375 IAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
+APE+ + + D ++ GV+ E+ G P
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 87/197 (44%), Gaps = 10/197 (5%)
Query: 213 IGTGGYGSVYKA-QLPNGKVFALKKLHTS-EELAFIKSFKNEAQVLSQVLHRNIVKLYGY 270
+G+G YGSV A G A+KKL + + K E ++L + H N++ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 271 CLHKKCMFLIYE-YMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSI 329
+ + + Y+ + +L+N +L ++ + L Y+H S I
Sbjct: 97 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADI 153
Query: 330 IHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYT-MVMTEK 388
IHRD+ +N+ +N E + DFG AR + T T Y APE+ M +
Sbjct: 154 IHRDLKPSNLAVNEDCELKILDFGLAR---HTADEMTGYVATRWYRAPEIMLNWMHYNQT 210
Query: 389 CDVYSFGVVTLEVLMGK 405
D++S G + E+L G+
Sbjct: 211 VDIWSVGCIMAELLTGR 227
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 96/213 (45%), Gaps = 26/213 (12%)
Query: 205 EDFDIRYCIGTGGYGSVYKAQ-LPNGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLH 261
+ FD +GTG +G V + +G +A+K L + +L I+ NE ++L V
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 262 RNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHA---- 317
+VKL ++++ EY+ G +F +L R + A +A
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR---------IGRFSEPHARFYAAQIV 151
Query: 318 --LAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTL-LAGTYGY 374
YLH S +I+RD+ N+L++ + V DFG A+ + RT L GT Y
Sbjct: 152 LTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLXGTPEY 204
Query: 375 IAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
+APE+ + + D ++ GV+ E+ G P
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 92/211 (43%), Gaps = 17/211 (8%)
Query: 207 FDIRYCIGTGGYGSVYKAQLPN------GKVFALKKLHTSEELAFIKSFKNEAQVLSQVL 260
+D +G+G + V K + + K ++ +S + + E +L ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 261 HRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAY 320
H N++ L+ +K + LI E + G LF L E E + +K + + + Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE---EEATEFLKQILNGVYY 129
Query: 321 LHHDCSPSIIHRDISSNNILLNS----KLEAFVADFGTARLLHADSSNRTLLAGTYGYIA 376
LH S I H D+ NI+L K + DFG A + + + + GT ++A
Sbjct: 130 LH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF-GTPEFVA 185
Query: 377 PELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
PE+ + + D++S GV+T +L G P
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 87/197 (44%), Gaps = 10/197 (5%)
Query: 213 IGTGGYGSVYKA-QLPNGKVFALKKLHTS-EELAFIKSFKNEAQVLSQVLHRNIVKLYGY 270
+G+G YGSV A G A+KKL + + K E ++L + H N++ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 271 CLHKKCMFLIYE-YMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSI 329
+ + + Y+ + +L+N +L ++ + L Y+H S I
Sbjct: 97 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADI 153
Query: 330 IHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYT-MVMTEK 388
IHRD+ +N+ +N E + DFG AR + T T Y APE+ M +
Sbjct: 154 IHRDLKPSNLAVNEDCELKILDFGLAR---HTADEMTGYVATRWYRAPEIMLNWMHYNQT 210
Query: 389 CDVYSFGVVTLEVLMGK 405
D++S G + E+L G+
Sbjct: 211 VDIWSVGCIMAELLTGR 227
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 96/213 (45%), Gaps = 26/213 (12%)
Query: 205 EDFDIRYCIGTGGYGSVYKAQ-LPNGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLH 261
+ FD +GTG +G V + +G +A+K L + +L I+ NE ++L V
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 262 RNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHA---- 317
+VKL ++++ EY+ G +F +L R + A +A
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR---------IGRFSEPHARFYAAQIV 151
Query: 318 --LAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTL-LAGTYGY 374
YLH S +I+RD+ N+L++ + V DFG A+ + RT L GT Y
Sbjct: 152 LTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEY 204
Query: 375 IAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
+APE+ + + D ++ GV+ E+ G P
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 95/217 (43%), Gaps = 20/217 (9%)
Query: 207 FDI--RYC----IGTGGYGSVYKAQLPNGKV-FALKKLHTSEELAFIKSFKNEAQVLSQV 259
FD+ RY IG G YG V A K A+KK+ E + + E Q+L +
Sbjct: 39 FDVGPRYTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRF 98
Query: 260 LHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALA 319
H N++ + + Y+ + + +L+ + +L + + L
Sbjct: 99 RHENVIGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICYFLYQILRGLK 158
Query: 320 YLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLL---HADSSNRTLLAGTYGYIA 376
Y+H S +++HRD+ +N+L+N+ + + DFG AR+ H + T T Y A
Sbjct: 159 YIH---SANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRA 215
Query: 377 PELAY-TMVMTEKCDVYSFGVVTLEVLM------GKH 406
PE+ + T+ D++S G + E+L GKH
Sbjct: 216 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 252
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 102/219 (46%), Gaps = 23/219 (10%)
Query: 205 EDFDIRYCIGTGGYGSVYKA-QLPNGKVFALKKL-------HTSEELAFIKSFK-NEAQV 255
E+++ + +G G V + P K +A+K + ++EE+ ++ E +
Sbjct: 17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 76
Query: 256 LSQVL-HRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAM 314
L +V H NI++L FL+++ M++G LF L + V L + I++A+
Sbjct: 77 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL---TEKVTLSEKETRKIMRAL 133
Query: 315 AHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGY 374
+ LH +I+HRD+ NILL+ + + DFG + L R + GT Y
Sbjct: 134 LEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRE-VCGTPSY 189
Query: 375 IAPELAYTMV------MTEKCDVYSFGVVTLEVLMGKHP 407
+APE+ + ++ D++S GV+ +L G P
Sbjct: 190 LAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 228
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 96/213 (45%), Gaps = 26/213 (12%)
Query: 205 EDFDIRYCIGTGGYGSVYKAQ-LPNGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLH 261
+ FD +GTG +G V + +G +A+K L + +L I+ NE ++L V
Sbjct: 42 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 262 RNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHA---- 317
+VKL ++++ EY+ G +F +L R + A +A
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR---------IGRFSEPHARFYAAQIV 152
Query: 318 --LAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTL-LAGTYGY 374
YLH S +I+RD+ N+L++ + V DFG A+ + RT L GT Y
Sbjct: 153 LTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEY 205
Query: 375 IAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
+APE+ + + D ++ GV+ E+ G P
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 96/216 (44%), Gaps = 21/216 (9%)
Query: 213 IGTGGYGSVYKA------QLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHR-NIV 265
+G G +G V +A + + A+K L + ++ +E ++L + H N+V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 266 KLYGYCLHKKC-MFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVK---AMAHALAY- 320
L G C + +I E+ + G+L L + + ++ K + H + Y
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYS 156
Query: 321 ------LHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSS--NRTLLAGTY 372
+ S IHRD+++ NILL+ K + DFG AR ++ D +
Sbjct: 157 FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 216
Query: 373 GYIAPELAYTMVMTEKCDVYSFGVVTLEVL-MGKHP 407
++APE + V T + DV+SFGV+ E+ +G P
Sbjct: 217 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 252
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 62/131 (47%), Gaps = 6/131 (4%)
Query: 277 MFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISS 336
++ + EY+ G L +++ + V +A L +L S II+RD+
Sbjct: 96 LYFVMEYVNGGDL---MYHIQQVGRFKEPHAVFYAAEIAIGLFFLQ---SKGIIYRDLKL 149
Query: 337 NNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGV 396
+N++L+S+ +ADFG + D GT YIAPE+ + D ++FGV
Sbjct: 150 DNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGV 209
Query: 397 VTLEVLMGKHP 407
+ E+L G+ P
Sbjct: 210 LLYEMLAGQAP 220
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 95/212 (44%), Gaps = 24/212 (11%)
Query: 205 EDFDIRYCIGTGGYGSVYKAQ-LPNGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLH 261
+ F+ +GTG +G V + + G +A+K L + +L I+ NE ++L V
Sbjct: 27 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 86
Query: 262 RNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHA---- 317
+VKL ++++ EY+ G +F +L R + A +A
Sbjct: 87 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR---------IGRFSEPHARFYAAQIV 137
Query: 318 --LAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYI 375
YLH S +I+RD+ N+L++ + V DFG A+ + + L GT Y+
Sbjct: 138 LTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWT---LCGTPEYL 191
Query: 376 APELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
APE+ + + D ++ GV+ E+ G P
Sbjct: 192 APEIILSKGYNKAVDWWALGVLIYEMAAGYPP 223
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 96/213 (45%), Gaps = 26/213 (12%)
Query: 205 EDFDIRYCIGTGGYGSVYKAQ-LPNGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLH 261
+ FD +GTG +G V + +G +A+K L + +L I+ NE ++L V
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 262 RNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHA---- 317
+VKL ++++ EY+ G +F +L R + A +A
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR---------IGRFSEPHARFYAAQIV 151
Query: 318 --LAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTL-LAGTYGY 374
YLH S +I+RD+ N+L++ + V DFG A+ + RT L GT Y
Sbjct: 152 LTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEY 204
Query: 375 IAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
+APE+ + + D ++ GV+ E+ G P
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 96/213 (45%), Gaps = 26/213 (12%)
Query: 205 EDFDIRYCIGTGGYGSVYKAQ-LPNGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLH 261
+ FD +GTG +G V + +G +A+K L + +L I+ NE ++L V
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 262 RNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHA---- 317
+VKL ++++ EY+ G +F +L R + A +A
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR---------IGRFSEPHARFYAAQIV 151
Query: 318 --LAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTL-LAGTYGY 374
YLH S +I+RD+ N+L++ + V DFG A+ + RT L GT Y
Sbjct: 152 LTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEY 204
Query: 375 IAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
+APE+ + + D ++ GV+ E+ G P
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 95/212 (44%), Gaps = 24/212 (11%)
Query: 205 EDFDIRYCIGTGGYGSVYKAQ-LPNGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLH 261
+ FD +GTG +G V + +G +A+K L + +L I+ NE ++L V
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 121
Query: 262 RNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHA---- 317
+VKL ++++ EY+ G +F +L R + A +A
Sbjct: 122 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR---------IGRFSEPHARFYAAQIV 172
Query: 318 --LAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYI 375
YLH S +I+RD+ N+L++ + V DFG A+ + + L GT Y+
Sbjct: 173 LTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGATWT---LCGTPEYL 226
Query: 376 APELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
APE+ + + D ++ GV+ E+ G P
Sbjct: 227 APEIILSKGYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 93/207 (44%), Gaps = 14/207 (6%)
Query: 205 EDFDIRYCIGTGGYGSVYKAQ-LPNGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLH 261
+ FD +GTG +G V + +G +A+K L + +L I+ NE ++L V
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 262 RNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYL 321
+VKL ++++ EY+ G +F +L E + YL
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAE---PHARFYAAQIVLTFEYL 157
Query: 322 HHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTL-LAGTYGYIAPELA 380
H S +I+RD+ N+L++ + V DFG A+ + RT L GT Y+APE+
Sbjct: 158 H---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLAPEII 210
Query: 381 YTMVMTEKCDVYSFGVVTLEVLMGKHP 407
+ + D ++ GV+ E+ G P
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 96/213 (45%), Gaps = 26/213 (12%)
Query: 205 EDFDIRYCIGTGGYGSVYKAQ-LPNGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLH 261
+ FD +GTG +G V + +G +A+K L + +L I+ NE ++L V
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 262 RNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHA---- 317
+VKL ++++ EY+ G +F +L R + A +A
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR---------IGRFSEPHARFYAAQIV 151
Query: 318 --LAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTL-LAGTYGY 374
YLH S +I+RD+ N+L++ + V DFG A+ + RT L GT Y
Sbjct: 152 LTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEY 204
Query: 375 IAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
+APE+ + + D ++ GV+ E+ G P
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 86/198 (43%), Gaps = 8/198 (4%)
Query: 213 IGTGGYGSVYKAQLPNGKV-FALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYC 271
IG G YG V A KV A+KK+ E + + E ++L + H NI+ +
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 110
Query: 272 LHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIH 331
+ Y+ + +L+ L + + L Y+H S +++H
Sbjct: 111 RAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLH 167
Query: 332 RDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLA---GTYGYIAPELAY-TMVMTE 387
RD+ +N+LLN+ + + DFG AR+ D + L T Y APE+ + T+
Sbjct: 168 RDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 227
Query: 388 KCDVYSFGVVTLEVLMGK 405
D++S G + E+L +
Sbjct: 228 SIDIWSVGCILAEMLSNR 245
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 97/216 (44%), Gaps = 22/216 (10%)
Query: 213 IGTGGYGSVYKA------QLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHR-NIV 265
+G G +G V +A + + A+K L + ++ +E ++L + H N+V
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 95
Query: 266 KLYGYCLHKKC-MFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVK---AMAHALAY- 320
L G C + +I E+ + G+L L + + + + ++ K + H + Y
Sbjct: 96 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEF-VPYKTPEDLYKDFLTLEHLICYS 154
Query: 321 ------LHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSS--NRTLLAGTY 372
+ S IHRD+++ NILL+ K + DFG AR + D +
Sbjct: 155 FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPL 214
Query: 373 GYIAPELAYTMVMTEKCDVYSFGVVTLEVL-MGKHP 407
++APE + V T + DV+SFGV+ E+ +G P
Sbjct: 215 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 250
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 92/206 (44%), Gaps = 12/206 (5%)
Query: 205 EDFDIRYCIGTGGYGSVYKAQ-LPNGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLH 261
+ FD +GTG +G V + +G +A+K L + +L I+ NE ++L V
Sbjct: 36 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 95
Query: 262 RNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYL 321
+VKL ++++ EY+ G +F +L E + YL
Sbjct: 96 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXE---PHARFYAAQIVLTFEYL 152
Query: 322 HHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAY 381
H S +I+RD+ N+L++ + V DFG A+ + + L GT Y+APE+
Sbjct: 153 H---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT---WXLCGTPEYLAPEIIL 206
Query: 382 TMVMTEKCDVYSFGVVTLEVLMGKHP 407
+ + D ++ GV+ E+ G P
Sbjct: 207 SKGYNKAVDWWALGVLIYEMAAGYPP 232
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 92/211 (43%), Gaps = 17/211 (8%)
Query: 207 FDIRYCIGTGGYGSVYKAQLPN------GKVFALKKLHTSEELAFIKSFKNEAQVLSQVL 260
+D +G+G + V K + + K ++ +S + + E +L ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 261 HRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAY 320
H N++ L+ +K + LI E + G LF L E E + +K + + + Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE---EEATEFLKQILNGVYY 129
Query: 321 LHHDCSPSIIHRDISSNNILLNS----KLEAFVADFGTARLLHADSSNRTLLAGTYGYIA 376
LH S I H D+ NI+L K + DFG A + + + + GT ++A
Sbjct: 130 LH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF-GTPEFVA 185
Query: 377 PELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
PE+ + + D++S GV+T +L G P
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 93/207 (44%), Gaps = 14/207 (6%)
Query: 205 EDFDIRYCIGTGGYGSVYKAQ-LPNGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLH 261
+ FD +GTG +G V + +G +A+K L + +L I+ NE ++L V
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 121
Query: 262 RNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYL 321
+VKL ++++ EY+ G +F +L E + YL
Sbjct: 122 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXE---PHARFYAAQIVLTFEYL 178
Query: 322 HHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTL-LAGTYGYIAPELA 380
H S +I+RD+ N+L++ + V DFG A+ + RT L GT Y+APE+
Sbjct: 179 H---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLAPEII 231
Query: 381 YTMVMTEKCDVYSFGVVTLEVLMGKHP 407
+ + D ++ GV+ E+ G P
Sbjct: 232 LSKGYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 93/208 (44%), Gaps = 12/208 (5%)
Query: 206 DFDIRYCIGTGGYGSVYKA-QLPNGKVFALKKLHTS--EELAFIKSFKNEAQVLSQVLHR 262
++ I +G G +G V A G+ ALK ++ + + E L + H
Sbjct: 5 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 64
Query: 263 NIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLH 322
+I+KLY K + ++ EY G+ + D + A+R + + A+ Y H
Sbjct: 65 HIIKLYDVIKSKDEIIMVIEYA--GNELFDYIVQRDKMSEQEARR--FFQQIISAVEYCH 120
Query: 323 HDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPE-LAY 381
I+HRD+ N+LL+ L +ADFG + ++ D + G+ Y APE ++
Sbjct: 121 RH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIM-TDGNFLKTSCGSPNYAAPEVISG 176
Query: 382 TMVMTEKCDVYSFGVVTLEVLMGKHPRD 409
+ + DV+S GV+ +L + P D
Sbjct: 177 KLYAGPEVDVWSCGVILYVMLCRRLPFD 204
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 95/212 (44%), Gaps = 24/212 (11%)
Query: 205 EDFDIRYCIGTGGYGSVYKAQ-LPNGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLH 261
+ F+ +GTG +G V + + G +A+K L + +L I+ NE ++L V
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 262 RNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHA---- 317
+VKL ++++ EY+ G +F +L R + A +A
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR---------IGRFSEPHARFYAAQIV 152
Query: 318 --LAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYI 375
YLH S +I+RD+ N+L++ + V DFG A+ + + L GT Y+
Sbjct: 153 LTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWT---LCGTPEYL 206
Query: 376 APELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
APE+ + + D ++ GV+ E+ G P
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 92/211 (43%), Gaps = 17/211 (8%)
Query: 207 FDIRYCIGTGGYGSVYKAQLPN------GKVFALKKLHTSEELAFIKSFKNEAQVLSQVL 260
+D +G+G + V K + + K ++ +S + + E +L ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 261 HRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAY 320
H N++ L+ +K + LI E + G LF L E E + +K + + + Y
Sbjct: 73 HPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTE---EEATEFLKQILNGVYY 129
Query: 321 LHHDCSPSIIHRDISSNNILLNS----KLEAFVADFGTARLLHADSSNRTLLAGTYGYIA 376
LH S I H D+ NI+L K + DFG A + + + + GT ++A
Sbjct: 130 LH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF-GTPEFVA 185
Query: 377 PELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
PE+ + + D++S GV+T +L G P
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 96/213 (45%), Gaps = 26/213 (12%)
Query: 205 EDFDIRYCIGTGGYGSVYKAQ-LPNGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLH 261
+ F+ +GTG +G V + + G +A+K L + +L I+ NE ++L V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 262 RNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHA---- 317
+VKL ++++ EY+ G +F +L R + A +A
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR---------IGRFSEPHARFYAAQIV 151
Query: 318 --LAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTL-LAGTYGY 374
YLH S +I+RD+ N+L++ + V DFG A+ + RT L GT Y
Sbjct: 152 LTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEY 204
Query: 375 IAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
+APE+ + + D ++ GV+ E+ G P
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 92/211 (43%), Gaps = 17/211 (8%)
Query: 207 FDIRYCIGTGGYGSVYKAQLPN------GKVFALKKLHTSEELAFIKSFKNEAQVLSQVL 260
+D +G+G + V K + + K ++ +S + + E +L ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 261 HRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAY 320
H N++ L+ +K + LI E + G LF L E E + +K + + + Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE---EEATEFLKQILNGVYY 129
Query: 321 LHHDCSPSIIHRDISSNNILLNS----KLEAFVADFGTARLLHADSSNRTLLAGTYGYIA 376
LH S I H D+ NI+L K + DFG A + + + + GT ++A
Sbjct: 130 LH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF-GTPEFVA 185
Query: 377 PELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
PE+ + + D++S GV+T +L G P
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 93/207 (44%), Gaps = 14/207 (6%)
Query: 205 EDFDIRYCIGTGGYGSVYKAQ-LPNGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLH 261
+ FD +GTG +G V + +G +A+K L + +L I+ NE ++L V
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 262 RNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYL 321
+VKL ++++ EY+ G +F +L E + YL
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXE---PHARFYAAQIVLTFEYL 157
Query: 322 HHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTL-LAGTYGYIAPELA 380
H S +I+RD+ N+L++ + V DFG A+ + RT L GT Y+APE+
Sbjct: 158 H---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEII 210
Query: 381 YTMVMTEKCDVYSFGVVTLEVLMGKHP 407
+ + D ++ GV+ E+ G P
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 96/213 (45%), Gaps = 26/213 (12%)
Query: 205 EDFDIRYCIGTGGYGSVYKAQ-LPNGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLH 261
+ F+ +GTG +G V + + G +A+K L + +L I+ NE ++L V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 262 RNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHA---- 317
+VKL ++++ EY+ G +F +L R + A +A
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR---------IGRFSEPHARFYAAQIV 151
Query: 318 --LAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTL-LAGTYGY 374
YLH S +I+RD+ N+L++ + V DFG A+ + RT L GT Y
Sbjct: 152 LTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEY 204
Query: 375 IAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
+APE+ + + D ++ GV+ E+ G P
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 96/213 (45%), Gaps = 26/213 (12%)
Query: 205 EDFDIRYCIGTGGYGSVYKAQ-LPNGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLH 261
+ F+ +GTG +G V + + G +A+K L + +L I+ NE ++L V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 262 RNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHA---- 317
+VKL ++++ EY+ G +F +L R + A +A
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR---------IGRFSEPHARFYAAQIV 151
Query: 318 --LAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTL-LAGTYGY 374
YLH S +I+RD+ N+L++ + V DFG A+ + RT L GT Y
Sbjct: 152 LTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEY 204
Query: 375 IAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
+APE+ + + D ++ GV+ E+ G P
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 93/208 (44%), Gaps = 12/208 (5%)
Query: 206 DFDIRYCIGTGGYGSVYKA-QLPNGKVFALKKLHTS--EELAFIKSFKNEAQVLSQVLHR 262
++ I +G G +G V A G+ ALK ++ + + E L + H
Sbjct: 9 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 68
Query: 263 NIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLH 322
+I+KLY K + ++ EY G+ + D + A+R + + A+ Y H
Sbjct: 69 HIIKLYDVIKSKDEIIMVIEYA--GNELFDYIVQRDKMSEQEARR--FFQQIISAVEYCH 124
Query: 323 HDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPE-LAY 381
I+HRD+ N+LL+ L +ADFG + ++ D + G+ Y APE ++
Sbjct: 125 RH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIM-TDGNFLKTSCGSPNYAAPEVISG 180
Query: 382 TMVMTEKCDVYSFGVVTLEVLMGKHPRD 409
+ + DV+S GV+ +L + P D
Sbjct: 181 KLYAGPEVDVWSCGVILYVMLCRRLPFD 208
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 95/216 (43%), Gaps = 21/216 (9%)
Query: 213 IGTGGYGSVYKA------QLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHR-NIV 265
+G G +G V +A + + A+K L + ++ +E ++L + H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 266 KLYGYCLHKKC-MFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVK---AMAHALAY- 320
L G C + +I E+ + G+L L + + ++ K + H + Y
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 321 ------LHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSS--NRTLLAGTY 372
+ S IHRD+++ NILL+ K + DFG AR + D +
Sbjct: 155 FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPL 214
Query: 373 GYIAPELAYTMVMTEKCDVYSFGVVTLEVL-MGKHP 407
++APE + V T + DV+SFGV+ E+ +G P
Sbjct: 215 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 250
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 93/207 (44%), Gaps = 14/207 (6%)
Query: 205 EDFDIRYCIGTGGYGSVYKAQ-LPNGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLH 261
+ FD +GTG +G V + +G +A+K L + +L I+ NE ++L V
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 262 RNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYL 321
+VKL ++++ EY+ G +F +L E + YL
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXE---PHARFYAAQIVLTFEYL 157
Query: 322 HHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTL-LAGTYGYIAPELA 380
H S +I+RD+ N+L++ + V DFG A+ + RT L GT Y+APE+
Sbjct: 158 H---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLAPEII 210
Query: 381 YTMVMTEKCDVYSFGVVTLEVLMGKHP 407
+ + D ++ GV+ E+ G P
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 76/333 (22%), Positives = 137/333 (41%), Gaps = 72/333 (21%)
Query: 206 DFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTS---EELAFIKS-------------F 249
D+ I + G + + + N K +ALKK S ++ F KS F
Sbjct: 32 DYRIIRTLNQGKFNKIILCEKDN-KFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDF 90
Query: 250 KNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVN 309
KNE Q+++ + + + G + +++IYEYME S+ L +E LD
Sbjct: 91 KNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSI---LKFDEYFFVLDKNYTCF 147
Query: 310 --------IVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHAD 361
I+K++ ++ +Y+H++ +I HRD+ +NIL++ ++DFG + +
Sbjct: 148 IPIQVIKCIIKSVLNSFSYIHNE--KNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDK 205
Query: 362 SSNRTLLAGTYGYIAPEL--AYTMVMTEKCDVYSFGVVTLEVLMGKHPRDIXXXXXXXXD 419
+ GTY ++ PE + K D++S G+ + P +
Sbjct: 206 KIKGS--RGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSL--------- 254
Query: 420 PKIMLIDVLD----QRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQE---- 471
KI L+++ + + + P+DR F +N KS + +S E
Sbjct: 255 -KISLVELFNNIRTKNIEYPLDRN-----------HFLYPLTNKKSTCSNNFLSNEDIDF 302
Query: 472 -FLITRKTP--------LVKHAAIQDISISELR 495
L RK P +KH + D +I +LR
Sbjct: 303 LKLFLRKNPAERITSEDALKHEWLADTNIEDLR 335
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 96/216 (44%), Gaps = 21/216 (9%)
Query: 213 IGTGGYGSVYKA------QLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHR-NIV 265
+G G +G V +A + + A+K L + ++ +E ++L + H N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 266 KLYGYCLHKKC-MFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVK---AMAHALAY- 320
L G C + +I E+ + G+L L + + ++ K + H + Y
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 321 ------LHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSS--NRTLLAGTY 372
+ S IHRD+++ NILL+ K + DFG AR ++ D +
Sbjct: 146 FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 205
Query: 373 GYIAPELAYTMVMTEKCDVYSFGVVTLEVL-MGKHP 407
++APE + V T + DV+SFGV+ E+ +G P
Sbjct: 206 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 241
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 96/213 (45%), Gaps = 26/213 (12%)
Query: 205 EDFDIRYCIGTGGYGSVYKAQ-LPNGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLH 261
+ F+ +GTG +G V + + G +A+K L + +L I+ NE ++L V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 262 RNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHA---- 317
+VKL ++++ EY+ G +F +L R + A +A
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR---------IGRFSEPHARFYAAQIV 151
Query: 318 --LAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTL-LAGTYGY 374
YLH S +I+RD+ N+L++ + V DFG A+ + RT L GT Y
Sbjct: 152 LTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEY 204
Query: 375 IAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
+APE+ + + D ++ GV+ E+ G P
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 96/213 (45%), Gaps = 26/213 (12%)
Query: 205 EDFDIRYCIGTGGYGSVYKAQ-LPNGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLH 261
+ F+ +GTG +G V + + G +A+K L + +L I+ NE ++L V
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 262 RNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHA---- 317
+VKL ++++ EY+ G +F +L R + A +A
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR---------IGRFSEPHARFYAAQIV 152
Query: 318 --LAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTL-LAGTYGY 374
YLH S +I+RD+ N+L++ + V DFG A+ + RT L GT Y
Sbjct: 153 LTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEY 205
Query: 375 IAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
+APE+ + + D ++ GV+ E+ G P
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 93/207 (44%), Gaps = 14/207 (6%)
Query: 205 EDFDIRYCIGTGGYGSVYKAQ-LPNGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLH 261
+ FD +GTG +G V + +G +A+K L + +L I+ NE ++L V
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 262 RNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYL 321
+VKL ++++ EY+ G +F +L E + YL
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXE---PHARFYAAQIVLTFEYL 157
Query: 322 HHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTL-LAGTYGYIAPELA 380
H S +I+RD+ N+L++ + V DFG A+ + RT L GT Y+APE+
Sbjct: 158 H---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEII 210
Query: 381 YTMVMTEKCDVYSFGVVTLEVLMGKHP 407
+ + D ++ GV+ E+ G P
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 91/203 (44%), Gaps = 21/203 (10%)
Query: 213 IGTGGYGSVYKAQ-LPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHR-NIVKLYGY 270
+G G +G V++ + G A+KK+ ++ F+ E V L IV LYG
Sbjct: 66 VGRGSFGEVHRMKDKQTGFQCAVKKVR-------LEVFRVEELVACAGLSSPRIVPLYGA 118
Query: 271 CLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSII 330
+ + E +E GSL L + D + + + L YLH + I+
Sbjct: 119 VREGPWVNIFMELLEGGSLG-QLIKQMGCLPED--RALYYLGQALEGLEYLH---TRRIL 172
Query: 331 HRDISSNNILLNS-KLEAFVADFGTARLLHADSSNRTLLAGTY-----GYIAPELAYTMV 384
H D+ ++N+LL+S A + DFG A L D ++LL G Y ++APE+
Sbjct: 173 HGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKP 232
Query: 385 MTEKCDVYSFGVVTLEVLMGKHP 407
K D++S + L +L G HP
Sbjct: 233 CDAKVDIWSSCCMMLHMLNGCHP 255
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 119/272 (43%), Gaps = 33/272 (12%)
Query: 207 FDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSE-ELAFIKSFKNEAQVLSQVLHRN-- 263
+ I IG+GG V++ +++A+K ++ E + + S++NE L+++ +
Sbjct: 14 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDK 73
Query: 264 IVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHH 323
I++LY Y + + ++++ ME G++ N + +D +R + K M A+ +H
Sbjct: 74 IIRLYDYEITDQYIYMV---MECGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIHQ 129
Query: 324 DCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSN--RTLLAGTYGYIAPELAY 381
I+H D+ N L+ + + DFG A + D+++ + GT Y+ PE
Sbjct: 130 H---GIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIK 185
Query: 382 TMVMTEK-----------CDVYSFGVVTLEVLMGKHPRDIXXXXXXXXDPKIMLIDVLDQ 430
M + + DV+S G + + GK P +ID +
Sbjct: 186 DMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLH---AIIDPNHE 242
Query: 431 RLPPPVDRKVIRDILLISTVSFACLQSNPKSR 462
P + K ++D+L CL+ +PK R
Sbjct: 243 IEFPDIPEKDLQDVLK------CCLKRDPKQR 268
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 91/203 (44%), Gaps = 21/203 (10%)
Query: 213 IGTGGYGSVYKAQ-LPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHR-NIVKLYGY 270
+G G +G V++ + G A+KK+ ++ F+ E V L IV LYG
Sbjct: 82 VGRGSFGEVHRMKDKQTGFQCAVKKVR-------LEVFRVEELVACAGLSSPRIVPLYGA 134
Query: 271 CLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSII 330
+ + E +E GSL L + D + + + L YLH + I+
Sbjct: 135 VREGPWVNIFMELLEGGSLG-QLIKQMGCLPED--RALYYLGQALEGLEYLH---TRRIL 188
Query: 331 HRDISSNNILLNS-KLEAFVADFGTARLLHADSSNRTLLAGTY-----GYIAPELAYTMV 384
H D+ ++N+LL+S A + DFG A L D ++LL G Y ++APE+
Sbjct: 189 HGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKP 248
Query: 385 MTEKCDVYSFGVVTLEVLMGKHP 407
K D++S + L +L G HP
Sbjct: 249 CDAKVDIWSSCCMMLHMLNGCHP 271
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 92/211 (43%), Gaps = 17/211 (8%)
Query: 207 FDIRYCIGTGGYGSVYKAQLPN------GKVFALKKLHTSEELAFIKSFKNEAQVLSQVL 260
+D +G+G + V K + + K ++ +S + + E +L ++
Sbjct: 13 YDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 261 HRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAY 320
H N++ L+ +K + LI E + G LF L E E + +K + + + Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE---EEATEFLKQILNGVYY 129
Query: 321 LHHDCSPSIIHRDISSNNILLNS----KLEAFVADFGTARLLHADSSNRTLLAGTYGYIA 376
LH S I H D+ NI+L K + DFG A + + + + GT ++A
Sbjct: 130 LH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF-GTPEFVA 185
Query: 377 PELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
PE+ + + D++S GV+T +L G P
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 96/216 (44%), Gaps = 21/216 (9%)
Query: 213 IGTGGYGSVYKA------QLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHR-NIV 265
+G G +G V +A + + A+K L + ++ +E ++L + H N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 266 KLYGYCLHKKC-MFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVK---AMAHALAY- 320
L G C + +I E+ + G+L L + + ++ K + H + Y
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 321 ------LHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSS--NRTLLAGTY 372
+ S IHRD+++ NILL+ K + DFG AR ++ D +
Sbjct: 146 FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 205
Query: 373 GYIAPELAYTMVMTEKCDVYSFGVVTLEVL-MGKHP 407
++APE + V T + DV+SFGV+ E+ +G P
Sbjct: 206 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 241
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 87/197 (44%), Gaps = 10/197 (5%)
Query: 213 IGTGGYGSVYKA-QLPNGKVFALKKLHTS-EELAFIKSFKNEAQVLSQVLHRNIVKLYGY 270
+G+G YGSV A G A+KKL + + K E ++L + H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 271 CLHKKCMFLIYE-YMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSI 329
+ + + Y+ + +L+N +L ++ + L Y+H S I
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADI 146
Query: 330 IHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYT-MVMTEK 388
IHRD+ +N+ +N E + DF AR H D T T Y APE+ M +
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDFYLAR--HTDDE-MTGYVATRWYRAPEIMLNWMHYNQT 203
Query: 389 CDVYSFGVVTLEVLMGK 405
D++S G + E+L G+
Sbjct: 204 VDIWSVGCIMAELLTGR 220
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 117/275 (42%), Gaps = 31/275 (11%)
Query: 213 IGTGGYG--SVYKAQLPN---GKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKL 267
+G G +G S+Y N G++ A+K L ++ E ++L + H +IVK
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 75
Query: 268 YGYCLHK--KCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDC 325
G C + K + L+ EY+ GSL L + V L A+ + + + +AYLH
Sbjct: 76 KGCCEDQGEKSVQLVMEYVPLGSLRDYLPRH--CVGL--AQLLLFAQQICEGMAYLH--- 128
Query: 326 SPSIIHRDISSNNILLNSKLEAFVADFGTARLL---HADSSNRTLLAGTYGYIAPELAYT 382
+ IHR +++ N+LL++ + DFG A+ + H R + APE
Sbjct: 129 AQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKE 188
Query: 383 MVMTEKCDVYSFGVVTLEVLM----GKHPRDIXXXXXXXXDPKIMLIDVLD-----QRLP 433
DV+SFGV E+L + P ++ ++ + + +RLP
Sbjct: 189 CKFYYASDVWSFGVTLYELLTYCDSNQSPHTKFTELIGHTQGQMTVLRLTELLERGERLP 248
Query: 434 PPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSV 468
P DR L+ C ++ RPT Q++
Sbjct: 249 RP-DRCPCEIYHLMKN----CWETEASFRPTFQNL 278
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 93/208 (44%), Gaps = 12/208 (5%)
Query: 206 DFDIRYCIGTGGYGSVYKA-QLPNGKVFALKKLHTS--EELAFIKSFKNEAQVLSQVLHR 262
++ I +G G +G V A G+ ALK ++ + + E L + H
Sbjct: 14 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 73
Query: 263 NIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLH 322
+I+KLY K + ++ EY G+ + D + A+R + + A+ Y H
Sbjct: 74 HIIKLYDVIKSKDEIIMVIEYA--GNELFDYIVQRDKMSEQEARR--FFQQIISAVEYCH 129
Query: 323 HDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPE-LAY 381
I+HRD+ N+LL+ L +ADFG + ++ D + G+ Y APE ++
Sbjct: 130 RH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIM-TDGNFLKTSCGSPNYAAPEVISG 185
Query: 382 TMVMTEKCDVYSFGVVTLEVLMGKHPRD 409
+ + DV+S GV+ +L + P D
Sbjct: 186 KLYAGPEVDVWSCGVILYVMLCRRLPFD 213
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 92/210 (43%), Gaps = 10/210 (4%)
Query: 200 LIEATEDFDIRYCIGTGGYGSVYKA-QLPNGKVFALKKLHTS-EELAFIKSFKNEAQVLS 257
+ E E + +G+G YGSV + + +G A+KKL + + K E ++L
Sbjct: 46 IWEVPERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLK 105
Query: 258 QVLHRNIVKLYGYCLHKKCMFLIYE-YMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAH 316
+ H N++ L + + Y+ + +L+N +L ++ +
Sbjct: 106 HMKHENVIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR 165
Query: 317 ALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIA 376
L Y+H S IIHRD+ +N+ +N E + DFG AR H D T T Y A
Sbjct: 166 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTD-DEMTGYVATRWYRA 219
Query: 377 PELAYT-MVMTEKCDVYSFGVVTLEVLMGK 405
PE+ M D++S G + E+L G+
Sbjct: 220 PEIMLNWMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 117/275 (42%), Gaps = 31/275 (11%)
Query: 213 IGTGGYG--SVYKAQLPN---GKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKL 267
+G G +G S+Y N G++ A+K L ++ E ++L + H +IVK
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 76
Query: 268 YGYCLHK--KCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDC 325
G C + K + L+ EY+ GSL L + V L A+ + + + +AYLH
Sbjct: 77 KGCCEDQGEKSVQLVMEYVPLGSLRDYLPRH--CVGL--AQLLLFAQQICEGMAYLH--- 129
Query: 326 SPSIIHRDISSNNILLNSKLEAFVADFGTARLL---HADSSNRTLLAGTYGYIAPELAYT 382
+ IHR +++ N+LL++ + DFG A+ + H R + APE
Sbjct: 130 AQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKE 189
Query: 383 MVMTEKCDVYSFGVVTLEVLM----GKHPRDIXXXXXXXXDPKIMLIDVLD-----QRLP 433
DV+SFGV E+L + P ++ ++ + + +RLP
Sbjct: 190 CKFYYASDVWSFGVTLYELLTYCDSNQSPHTKFTELIGHTQGQMTVLRLTELLERGERLP 249
Query: 434 PPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSV 468
P DR L+ C ++ RPT Q++
Sbjct: 250 RP-DRCPCEIYHLMKN----CWETEASFRPTFQNL 279
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 93/207 (44%), Gaps = 14/207 (6%)
Query: 205 EDFDIRYCIGTGGYGSVYKAQ-LPNGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLH 261
+ F+ +GTG +G V + + G +A+K L + +L I+ NE ++L V
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 262 RNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYL 321
+VKL ++++ EY+ G +F +L E + YL
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXE---PHARFYAAQIVLTFEYL 158
Query: 322 HHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTL-LAGTYGYIAPELA 380
H S +I+RD+ N+L++ + V DFG A+ + RT L GT Y+APE+
Sbjct: 159 H---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLAPEII 211
Query: 381 YTMVMTEKCDVYSFGVVTLEVLMGKHP 407
+ + D ++ GV+ E+ G P
Sbjct: 212 LSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 56/117 (47%), Gaps = 1/117 (0%)
Query: 7 IPPEIGNLKNLIKLDVGS-NSLIGPIPSAXXXXXXXXXXXXXXXXXXGKIPPEIASMKYL 65
IP + NL L L +G N+L+GPIP A G IP ++ +K L
Sbjct: 68 IPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTL 127
Query: 66 TQLDLSNNNIQGSIPGEITKLSRLDYLNLSSNKLSGPVPFSNNDLSSMHTVVSLSPN 122
LD S N + G++P I+ L L + N++SG +P S S + T +++S N
Sbjct: 128 VTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRN 184
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 50/111 (45%), Gaps = 3/111 (2%)
Query: 4 IGIIPPEIGNLKNLIKLDVGSNSLIGPIPSAXXXXXXXXXXXXXXXXXXGKIPPEIASMK 63
+G IPP I L L L + ++ G IP G +PP I+S+
Sbjct: 90 VGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLP 149
Query: 64 YLTQLDLSNNNIQGSIPGEITKLSRL-DYLNLSSNKLSGPVP--FSNNDLS 111
L + N I G+IP S+L + +S N+L+G +P F+N +L+
Sbjct: 150 NLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLA 200
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 64/178 (35%), Gaps = 51/178 (28%)
Query: 5 GIIPPEIGNLKNLIKLDVGSNSLIGPIP-SAXXXXXXXXXXXXXXXXXXGKIPPEIASM- 62
G +PP I +L NL+ + N + G IP S GKIPP A++
Sbjct: 139 GTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN 198
Query: 63 ---------------------------------------------KYLTQLDLSNNNIQG 77
K L LDL NN I G
Sbjct: 199 LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYG 258
Query: 78 SIPGEITKLSRLDYLNLSSNKLSGPVPFSNNDLSSMHTVVSLSPNNGLCGNILDLPSC 135
++P +T+L L LN+S N L G +P N V + + N LCG+ LP+C
Sbjct: 259 TLPQGLTQLKFLHSLNVSFNNLCGEIPQGGN--LQRFDVSAYANNKCLCGS--PLPAC 312
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 93/208 (44%), Gaps = 12/208 (5%)
Query: 206 DFDIRYCIGTGGYGSVYKA-QLPNGKVFALKKLHTS--EELAFIKSFKNEAQVLSQVLHR 262
++ I +G G +G V A G+ ALK ++ + + E L + H
Sbjct: 15 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 74
Query: 263 NIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLH 322
+I+KLY K + ++ EY G+ + D + A+R + + A+ Y H
Sbjct: 75 HIIKLYDVIKSKDEIIMVIEYA--GNELFDYIVQRDKMSEQEARR--FFQQIISAVEYCH 130
Query: 323 HDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPE-LAY 381
I+HRD+ N+LL+ L +ADFG + ++ D + G+ Y APE ++
Sbjct: 131 RH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIM-TDGNFLKTSCGSPNYAAPEVISG 186
Query: 382 TMVMTEKCDVYSFGVVTLEVLMGKHPRD 409
+ + DV+S GV+ +L + P D
Sbjct: 187 KLYAGPEVDVWSCGVILYVMLCRRLPFD 214
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 87/197 (44%), Gaps = 10/197 (5%)
Query: 213 IGTGGYGSVYKA-QLPNGKVFALKKLHTS-EELAFIKSFKNEAQVLSQVLHRNIVKLYGY 270
+G+G YGSV A G A+KKL + + K E ++L + H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 271 CLHKKCMFLIYE-YMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSI 329
+ + + Y+ + +L+N +L ++ + L Y+H S I
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADI 146
Query: 330 IHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYT-MVMTEK 388
IHRD+ +N+ +N E + FG AR H D T T Y APE+ M +
Sbjct: 147 IHRDLKPSNLAVNEDCELKILGFGLAR--HTDDE-MTGYVATRWYRAPEIMLNWMHYNQT 203
Query: 389 CDVYSFGVVTLEVLMGK 405
D++S G + E+L G+
Sbjct: 204 VDIWSVGCIMAELLTGR 220
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 93/207 (44%), Gaps = 14/207 (6%)
Query: 205 EDFDIRYCIGTGGYGSVYKAQ-LPNGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLH 261
+ F+ +GTG +G V + + G +A+K L + +L I+ NE ++L V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 262 RNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYL 321
+VKL ++++ EY+ G +F +L E + YL
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXE---PHARFYAAQIVLTFEYL 157
Query: 322 HHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTL-LAGTYGYIAPELA 380
H S +I+RD+ N+L++ + V DFG A+ + RT L GT Y+APE+
Sbjct: 158 H---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLAPEII 210
Query: 381 YTMVMTEKCDVYSFGVVTLEVLMGKHP 407
+ + D ++ GV+ E+ G P
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 95/213 (44%), Gaps = 26/213 (12%)
Query: 205 EDFDIRYCIGTGGYGSVYKAQ-LPNGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLH 261
+ F+ +GTG +G V + G FA+K L + +L I+ NE ++L V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 262 RNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHA---- 317
+VKL ++++ EY+ G +F +L R + A +A
Sbjct: 101 PFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRR---------IGRFSEPHARFYAAQIV 151
Query: 318 --LAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTL-LAGTYGY 374
YLH S +I+RD+ N+L++ + V DFG A+ + RT L GT Y
Sbjct: 152 LTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEY 204
Query: 375 IAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
+APE+ + + D ++ GV+ E+ G P
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 95/213 (44%), Gaps = 26/213 (12%)
Query: 205 EDFDIRYCIGTGGYGSVYKAQ-LPNGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLH 261
+ F+ +GTG +G V + G FA+K L + +L I+ NE ++L V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 262 RNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHA---- 317
+VKL ++++ EY+ G +F +L R + A +A
Sbjct: 101 PFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRR---------IGRFSEPHARFYAAQIV 151
Query: 318 --LAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTL-LAGTYGY 374
YLH S +I+RD+ N+L++ + V DFG A+ + RT L GT Y
Sbjct: 152 LTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEY 204
Query: 375 IAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
+APE+ + + D ++ GV+ E+ G P
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 96/213 (45%), Gaps = 26/213 (12%)
Query: 205 EDFDIRYCIGTGGYGSVYKAQ-LPNGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLH 261
+ FD +GTG +G V + +G +A+K L + +L I+ NE ++L V
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 262 RNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHA---- 317
+VKL ++++ EY+ G +F +L R + A +A
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR---------IGRFSEPHARFYAAQIV 151
Query: 318 --LAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTL-LAGTYGY 374
YLH S +I+RD+ N++++ + V DFG A+ + RT L GT Y
Sbjct: 152 LTFEYLH---SLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEY 204
Query: 375 IAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
+APE+ + + D ++ GV+ E+ G P
Sbjct: 205 LAPEIIISKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 93/207 (44%), Gaps = 14/207 (6%)
Query: 205 EDFDIRYCIGTGGYGSVYKAQ-LPNGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLH 261
+ F+ +GTG +G V + + G +A+K L + +L I+ NE ++L V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 262 RNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYL 321
+VKL ++++ EY+ G +F +L E + YL
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXE---PHARFYAAQIVLTFEYL 157
Query: 322 HHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTL-LAGTYGYIAPELA 380
H S +I+RD+ N+L++ + V DFG A+ + RT L GT Y+APE+
Sbjct: 158 H---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLAPEII 210
Query: 381 YTMVMTEKCDVYSFGVVTLEVLMGKHP 407
+ + D ++ GV+ E+ G P
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 95/213 (44%), Gaps = 26/213 (12%)
Query: 205 EDFDIRYCIGTGGYGSVYKAQ-LPNGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLH 261
+ F+ +GTG +G V + G FA+K L + +L I+ NE ++L V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 262 RNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHA---- 317
+VKL ++++ EY+ G +F +L R + A +A
Sbjct: 101 PFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRR---------IGRFSEPHARFYAAQIV 151
Query: 318 --LAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTL-LAGTYGY 374
YLH S +I+RD+ N+L++ + V DFG A+ + RT L GT Y
Sbjct: 152 LTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEY 204
Query: 375 IAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
+APE+ + + D ++ GV+ E+ G P
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 91/196 (46%), Gaps = 21/196 (10%)
Query: 207 FDIRYCIGTGGYGSVYKA--QLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNI 264
++++ CI GG G +Y A + NG+ LK L S + E Q L++V+H +I
Sbjct: 82 YEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSI 141
Query: 265 VKLYGYCLHKK-----CMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALA 319
V+++ + H +++ EY+ SL +L A+ + + + AL+
Sbjct: 142 VQIFNFVEHTDRHGDPVGYIVMEYVGGQSL-----KRSKGQKLPVAEAIAYLLEILPALS 196
Query: 320 YLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPEL 379
YLH S +++ D+ NI+L + + D G +++ L GT G+ APE+
Sbjct: 197 YLH---SIGLVYNDLKPENIMLTEEQLKLI-DLGAVSRINSFG----YLYGTPGFQAPEI 248
Query: 380 AYTMVMTEKCDVYSFG 395
T T D+Y+ G
Sbjct: 249 VRTG-PTVATDIYTVG 263
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 119/272 (43%), Gaps = 33/272 (12%)
Query: 207 FDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSE-ELAFIKSFKNEAQVLSQVLHRN-- 263
+ I IG+GG V++ +++A+K ++ E + + S++NE L+++ +
Sbjct: 10 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDK 69
Query: 264 IVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHH 323
I++LY Y + + ++++ ME G++ N + +D +R + K M A+ +H
Sbjct: 70 IIRLYDYEITDQYIYMV---MECGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIHQ 125
Query: 324 DCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSN--RTLLAGTYGYIAPELAY 381
I+H D+ N L+ + + DFG A + D+++ + GT Y+ PE
Sbjct: 126 H---GIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIK 181
Query: 382 TMVMTEK-----------CDVYSFGVVTLEVLMGKHPRDIXXXXXXXXDPKIMLIDVLDQ 430
M + + DV+S G + + GK P +ID +
Sbjct: 182 DMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHA---IIDPNHE 238
Query: 431 RLPPPVDRKVIRDILLISTVSFACLQSNPKSR 462
P + K ++D+L CL+ +PK R
Sbjct: 239 IEFPDIPEKDLQDVLK------CCLKRDPKQR 264
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 91/203 (44%), Gaps = 21/203 (10%)
Query: 213 IGTGGYGSVYKAQ-LPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHR-NIVKLYGY 270
+G G +G V++ + G A+KK+ ++ F+ E V L IV LYG
Sbjct: 80 LGRGSFGEVHRMKDKQTGFQCAVKKVR-------LEVFRVEELVACAGLSSPRIVPLYGA 132
Query: 271 CLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSII 330
+ + E +E GSL L + D + + + L YLH + I+
Sbjct: 133 VREGPWVNIFMELLEGGSLG-QLIKQMGCLPED--RALYYLGQALEGLEYLH---TRRIL 186
Query: 331 HRDISSNNILLNS-KLEAFVADFGTARLLHADSSNRTLLAGTY-----GYIAPELAYTMV 384
H D+ ++N+LL+S A + DFG A L D ++LL G Y ++APE+
Sbjct: 187 HGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKP 246
Query: 385 MTEKCDVYSFGVVTLEVLMGKHP 407
K D++S + L +L G HP
Sbjct: 247 CDAKVDIWSSCCMMLHMLNGCHP 269
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 95/216 (43%), Gaps = 21/216 (9%)
Query: 213 IGTGGYGSVYKA------QLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHR-NIV 265
+G G +G V +A + + A+K L + ++ +E ++L + H N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 266 KLYGYCLHKKC-MFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVK---AMAHALAY- 320
L G C + +I E+ + G+L L + + ++ K + H + Y
Sbjct: 86 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 321 ------LHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSS--NRTLLAGTY 372
+ S IHRD+++ NILL+ K + DFG AR + D +
Sbjct: 146 FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPL 205
Query: 373 GYIAPELAYTMVMTEKCDVYSFGVVTLEVL-MGKHP 407
++APE + V T + DV+SFGV+ E+ +G P
Sbjct: 206 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 241
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 96/213 (45%), Gaps = 26/213 (12%)
Query: 205 EDFDIRYCIGTGGYGSVYKAQ-LPNGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLH 261
+ FD +GTG +G V + +G +A+K L + +L I+ NE ++L V
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 262 RNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHA---- 317
+VKL ++++ EY+ G +F +L R + A +A
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR---------IGRFSEPHARFYAAQIV 151
Query: 318 --LAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTL-LAGTYGY 374
YLH S +I+RD+ N+L++ + V DFG A+ + RT L GT Y
Sbjct: 152 LTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEY 204
Query: 375 IAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
+APE+ + + D ++ GV+ ++ G P
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYQMAAGYPP 237
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 119/272 (43%), Gaps = 33/272 (12%)
Query: 207 FDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSE-ELAFIKSFKNEAQVLSQVLHRN-- 263
+ I IG+GG V++ +++A+K ++ E + + S++NE L+++ +
Sbjct: 30 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDK 89
Query: 264 IVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHH 323
I++LY Y + + ++++ ME G++ N + +D +R + K M A+ +H
Sbjct: 90 IIRLYDYEITDQYIYMV---MECGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIHQ 145
Query: 324 DCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSN--RTLLAGTYGYIAPELAY 381
I+H D+ N L+ + + DFG A + D+++ + GT Y+ PE
Sbjct: 146 H---GIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIK 201
Query: 382 TMVMTEK-----------CDVYSFGVVTLEVLMGKHPRDIXXXXXXXXDPKIMLIDVLDQ 430
M + + DV+S G + + GK P +ID +
Sbjct: 202 DMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHA---IIDPNHE 258
Query: 431 RLPPPVDRKVIRDILLISTVSFACLQSNPKSR 462
P + K ++D+L CL+ +PK R
Sbjct: 259 IEFPDIPEKDLQDVLK------CCLKRDPKQR 284
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 79/156 (50%), Gaps = 20/156 (12%)
Query: 213 IGTGGYGSVYKAQ-LPNGKVFALKK-LHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGY 270
IG G +G V+KA+ G+ ALKK L +E+ F + E ++L + H N+V L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 271 CLHK-----KC---MFLIYEYMER--GSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAY 320
C K +C ++L++++ E L N+ V+ ++ +++ + + L Y
Sbjct: 86 CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNV-----LVKFTLSEIKRVMQMLLNGLYY 140
Query: 321 LHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTAR 356
+H + I+HRD+ + N+L+ +ADFG AR
Sbjct: 141 IHRN---KILHRDMKAANVLITRDGVLKLADFGLAR 173
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 87/197 (44%), Gaps = 10/197 (5%)
Query: 213 IGTGGYGSVYKA-QLPNGKVFALKKLHTS-EELAFIKSFKNEAQVLSQVLHRNIVKLYGY 270
+G+G YGSV A G A+KKL + + K E ++L + H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 271 CLHKKCMFLIYE-YMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSI 329
+ + + Y+ + +L+N +L ++ + L Y+H S I
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADI 146
Query: 330 IHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYT-MVMTEK 388
IHRD+ +N+ +N E + D G AR H D T T Y APE+ M +
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDAGLAR--HTDDE-MTGYVATRWYRAPEIMLNWMHYNQT 203
Query: 389 CDVYSFGVVTLEVLMGK 405
D++S G + E+L G+
Sbjct: 204 VDIWSVGCIMAELLTGR 220
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 79/156 (50%), Gaps = 20/156 (12%)
Query: 213 IGTGGYGSVYKAQ-LPNGKVFALKK-LHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGY 270
IG G +G V+KA+ G+ ALKK L +E+ F + E ++L + H N+V L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 271 CLHK-----KC---MFLIYEYMER--GSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAY 320
C K +C ++L++++ E L N+ V+ ++ +++ + + L Y
Sbjct: 86 CRTKASPYNRCKASIYLVFDFCEHDLAGLLSNV-----LVKFTLSEIKRVMQMLLNGLYY 140
Query: 321 LHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTAR 356
+H + I+HRD+ + N+L+ +ADFG AR
Sbjct: 141 IHRN---KILHRDMKAANVLITRDGVLKLADFGLAR 173
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 79/156 (50%), Gaps = 20/156 (12%)
Query: 213 IGTGGYGSVYKAQ-LPNGKVFALKK-LHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGY 270
IG G +G V+KA+ G+ ALKK L +E+ F + E ++L + H N+V L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 271 CLHK-----KC---MFLIYEYMER--GSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAY 320
C K +C ++L++++ E L N+ V+ ++ +++ + + L Y
Sbjct: 86 CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNV-----LVKFTLSEIKRVMQMLLNGLYY 140
Query: 321 LHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTAR 356
+H + I+HRD+ + N+L+ +ADFG AR
Sbjct: 141 IHRN---KILHRDMKAANVLITRDGVLKLADFGLAR 173
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 87/197 (44%), Gaps = 10/197 (5%)
Query: 213 IGTGGYGSVYKA-QLPNGKVFALKKLHTS-EELAFIKSFKNEAQVLSQVLHRNIVKLYGY 270
+G+G YGSV A G A+KKL + + K E ++L + H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 271 CLHKKCMFLIYE-YMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSI 329
+ + + Y+ + +L+N +L ++ + L Y+H S I
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADI 146
Query: 330 IHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYT-MVMTEK 388
IHRD+ +N+ +N E + D G AR H D T T Y APE+ M +
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDRGLAR--HTDDE-MTGYVATRWYRAPEIMLNWMHYNQT 203
Query: 389 CDVYSFGVVTLEVLMGK 405
D++S G + E+L G+
Sbjct: 204 VDIWSVGCIMAELLTGR 220
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 79/156 (50%), Gaps = 20/156 (12%)
Query: 213 IGTGGYGSVYKAQ-LPNGKVFALKK-LHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGY 270
IG G +G V+KA+ G+ ALKK L +E+ F + E ++L + H N+V L
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 84
Query: 271 CLHK-----KC---MFLIYEYMER--GSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAY 320
C K +C ++L++++ E L N+ V+ ++ +++ + + L Y
Sbjct: 85 CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNV-----LVKFTLSEIKRVMQMLLNGLYY 139
Query: 321 LHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTAR 356
+H + I+HRD+ + N+L+ +ADFG AR
Sbjct: 140 IHRN---KILHRDMKAANVLITRDGVLKLADFGLAR 172
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 119/272 (43%), Gaps = 33/272 (12%)
Query: 207 FDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSE-ELAFIKSFKNEAQVLSQVLHRN-- 263
+ I IG+GG V++ +++A+K ++ E + + S++NE L+++ +
Sbjct: 11 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDK 70
Query: 264 IVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHH 323
I++LY Y + + ++++ ME G++ N + +D +R + K M A+ +H
Sbjct: 71 IIRLYDYEITDQYIYMV---MECGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIHQ 126
Query: 324 DCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSN--RTLLAGTYGYIAPELAY 381
I+H D+ N L+ + + DFG A + D+++ + GT Y+ PE
Sbjct: 127 H---GIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIK 182
Query: 382 TMVMTEK-----------CDVYSFGVVTLEVLMGKHPRDIXXXXXXXXDPKIMLIDVLDQ 430
M + + DV+S G + + GK P +ID +
Sbjct: 183 DMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHA---IIDPNHE 239
Query: 431 RLPPPVDRKVIRDILLISTVSFACLQSNPKSR 462
P + K ++D+L CL+ +PK R
Sbjct: 240 IEFPDIPEKDLQDVLK------CCLKRDPKQR 265
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 95/216 (43%), Gaps = 21/216 (9%)
Query: 213 IGTGGYGSVYKA------QLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHR-NIV 265
+G G +G V +A + + A+K L + ++ +E ++L + H N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 266 KLYGYCLHKKC-MFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVK---AMAHALAY- 320
L G C + +I E+ + G+L L + + ++ K + H + Y
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 321 ------LHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSS--NRTLLAGTY 372
+ S IHRD+++ NILL+ K + DFG AR + D +
Sbjct: 146 FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPL 205
Query: 373 GYIAPELAYTMVMTEKCDVYSFGVVTLEVL-MGKHP 407
++APE + V T + DV+SFGV+ E+ +G P
Sbjct: 206 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 241
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 87/197 (44%), Gaps = 10/197 (5%)
Query: 213 IGTGGYGSVYKA-QLPNGKVFALKKLHTS-EELAFIKSFKNEAQVLSQVLHRNIVKLYGY 270
+G+G YGSV A G A+KKL + + K E ++L + H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 271 CLHKKCMFLIYE-YMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSI 329
+ + + Y+ + +L+N +L ++ + L Y+H S I
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADI 146
Query: 330 IHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYT-MVMTEK 388
IHRD+ +N+ +N E + D G AR H D T T Y APE+ M +
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDGGLAR--HTDDE-MTGYVATRWYRAPEIMLNWMHYNQT 203
Query: 389 CDVYSFGVVTLEVLMGK 405
D++S G + E+L G+
Sbjct: 204 VDIWSVGCIMAELLTGR 220
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 121/273 (44%), Gaps = 35/273 (12%)
Query: 207 FDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSE-ELAFIKSFKNEAQVLSQVLHRN-- 263
+ I IG+GG V++ +++A+K ++ E + + S++NE L+++ +
Sbjct: 58 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDK 117
Query: 264 IVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHH 323
I++LY Y + + ++++ ME G++ N + +D +R + K M A+ +H
Sbjct: 118 IIRLYDYEITDQYIYMV---MECGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIHQ 173
Query: 324 DCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSN--RTLLAGTYGYIAPELAY 381
I+H D+ N L+ + + DFG A + D+++ + GT Y+ PE
Sbjct: 174 H---GIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIK 229
Query: 382 TMVMTEK-----------CDVYSFGVVTLEVLMGKHP-RDIXXXXXXXXDPKIMLIDVLD 429
M + + DV+S G + + GK P + I +ID
Sbjct: 230 DMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLH----AIIDPNH 285
Query: 430 QRLPPPVDRKVIRDILLISTVSFACLQSNPKSR 462
+ P + K ++D+L CL+ +PK R
Sbjct: 286 EIEFPDIPEKDLQDVLK------CCLKRDPKQR 312
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 95/213 (44%), Gaps = 26/213 (12%)
Query: 205 EDFDIRYCIGTGGYGSVYKAQ-LPNGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLH 261
+ F+ +GTG +G V + + G +A+K L + +L I+ NE ++L V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF 100
Query: 262 RNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHA---- 317
+VKL ++++ EY G +F +L R + A +A
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRR---------IGRFSEPHARFYAAQIV 151
Query: 318 --LAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTL-LAGTYGY 374
YLH S +I+RD+ N++++ + V DFG A+ + RT L GT Y
Sbjct: 152 LTFEYLH---SLDLIYRDLKPENLMIDQQGYIQVTDFGLAKRV----KGRTWXLCGTPEY 204
Query: 375 IAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
+APE+ + + D ++ GV+ E+ G P
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 95/213 (44%), Gaps = 26/213 (12%)
Query: 205 EDFDIRYCIGTGGYGSVYKAQ-LPNGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLH 261
+ F+ +GTG +G V + G +A+K L + +L I+ NE ++L V
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 93
Query: 262 RNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHA---- 317
+VKL ++++ EY+ G +F +L R + A +A
Sbjct: 94 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR---------IGRFSEPHARFYAAQIV 144
Query: 318 --LAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTL-LAGTYGY 374
YLH S +I+RD+ N+L++ + V DFG A+ + RT L GT Y
Sbjct: 145 LTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEY 197
Query: 375 IAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
+APE+ + + D ++ GV+ E+ G P
Sbjct: 198 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 230
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 107/226 (47%), Gaps = 47/226 (20%)
Query: 209 IRYC----IGTGGYGS-VYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQV-LHR 262
I +C +G G G+ VY+ N V A+K++ E +F E Q+L + H
Sbjct: 24 ISFCPKDVLGHGAEGTIVYRGMFDNRDV-AVKRI-LPECFSFAD---REVQLLRESDEHP 78
Query: 263 NIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWA----KRVNIVKAMAHAL 318
N+++ + C K F Y +E C E + D+A + + +++ L
Sbjct: 79 NVIRYF--CTEKDRQFQ-YIAIE----LCAATLQEYVEQKDFAHLGLEPITLLQQTTSGL 131
Query: 319 AYLHHDCSPSIIHRDISSNNILL-----NSKLEAFVADFGTARLLHADS---SNRTLLAG 370
A+LH S +I+HRD+ +NIL+ + K++A ++DFG + L S R+ + G
Sbjct: 132 AHLH---SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPG 188
Query: 371 TYGYIAPELAYTMVMTEKC--------DVYSFGVVTLEVLM-GKHP 407
T G+IAPE+ ++E C D++S G V V+ G HP
Sbjct: 189 TEGWIAPEM-----LSEDCKENPTYTVDIFSAGCVFYYVISEGSHP 229
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 95/213 (44%), Gaps = 26/213 (12%)
Query: 205 EDFDIRYCIGTGGYGSVYKAQ-LPNGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLH 261
+ F+ +GTG +G V + + G +A+K L + +L I+ NE ++L V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF 100
Query: 262 RNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHA---- 317
+VKL ++++ EY G +F +L R + A +A
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRR---------IGRFSEPHARFYAAQIV 151
Query: 318 --LAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTL-LAGTYGY 374
YLH S +I+RD+ N++++ + V DFG A+ + RT L GT Y
Sbjct: 152 LTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRV----KGRTWXLCGTPEY 204
Query: 375 IAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
+APE+ + + D ++ GV+ E+ G P
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 95/213 (44%), Gaps = 26/213 (12%)
Query: 205 EDFDIRYCIGTGGYGSVYKAQ-LPNGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLH 261
+ F+ +GTG +G V + + G +A+K L + +L I+ NE ++L V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 262 RNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHA---- 317
+VKL ++++ EY G +F +L R + A +A
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRR---------IGRFSEPHARFYAAQIV 151
Query: 318 --LAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTL-LAGTYGY 374
YLH S +I+RD+ N++++ + V DFG A+ + RT L GT Y
Sbjct: 152 LTFEYLH---SLDLIYRDLKPENLMIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEY 204
Query: 375 IAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
+APE+ + + D ++ GV+ E+ G P
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 87/200 (43%), Gaps = 17/200 (8%)
Query: 213 IGTGGYGSVYKA-QLPNGKVFALKKLH-TSEELAFIKSFKNEAQVLSQVLHRNIVKLYGY 270
+G G YG VYKA + A+K++ EE + E +L ++ HRNI++L
Sbjct: 42 LGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSV 101
Query: 271 CLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDC-SPSI 329
H + LI+EY E L + N D + ++K+ + L + C S
Sbjct: 102 IHHNHRLHLIFEYAE-NDLKKYMDKNPDV-------SMRVIKSFLYQLINGVNFCHSRRC 153
Query: 330 IHRDISSNNILLN----SKLEAF-VADFGTARLLHADSSNRTLLAGTYGYIAPE-LAYTM 383
+HRD+ N+LL+ S+ + DFG AR T T Y PE L +
Sbjct: 154 LHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLWYRPPEILLGSR 213
Query: 384 VMTEKCDVYSFGVVTLEVLM 403
+ D++S + E+LM
Sbjct: 214 HYSTSVDIWSIACIWAEMLM 233
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 90/202 (44%), Gaps = 22/202 (10%)
Query: 213 IGTGGYGSV---YKAQLPNGKVFALKKLHTS-EELAFIKSFKNEAQVLSQVLHRNIVKLY 268
IG+G G V Y A L A+KKL + K E ++ V H+NI+ L
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLL 89
Query: 269 GYCLHKKCM------FLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLH 322
+K + +++ E M+ NL + +ELD + ++ M + +LH
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMD-----ANL-SQVIQMELDHERMSYLLYQMLVGIKHLH 143
Query: 323 HDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYT 382
S IIHRD+ +NI++ S + DFG AR S T T Y APE+
Sbjct: 144 ---SAGIIHRDLKPSNIVVKSDATLKILDFGLARTA-GTSFMMTPYVVTRYYRAPEVILG 199
Query: 383 MVMTEKCDVYSFGVVTLEVLMG 404
M E D++S GV+ E++ G
Sbjct: 200 MGYKENVDIWSVGVIMGEMIKG 221
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 119/272 (43%), Gaps = 33/272 (12%)
Query: 207 FDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSE-ELAFIKSFKNEAQVLSQVLHRN-- 263
+ I IG+GG V++ +++A+K ++ E + + S++NE L+++ +
Sbjct: 58 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDK 117
Query: 264 IVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHH 323
I++LY Y + + ++++ ME G++ N + +D +R + K M A+ +H
Sbjct: 118 IIRLYDYEITDQYIYMV---MECGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIHQ 173
Query: 324 DCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSN--RTLLAGTYGYIAPELAY 381
I+H D+ N L+ + + DFG A + D+++ + GT Y+ PE
Sbjct: 174 H---GIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIK 229
Query: 382 TMVMTEK-----------CDVYSFGVVTLEVLMGKHPRDIXXXXXXXXDPKIMLIDVLDQ 430
M + + DV+S G + + GK P +ID +
Sbjct: 230 DMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLH---AIIDPNHE 286
Query: 431 RLPPPVDRKVIRDILLISTVSFACLQSNPKSR 462
P + K ++D+L CL+ +PK R
Sbjct: 287 IEFPDIPEKDLQDVLK------CCLKRDPKQR 312
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 90/202 (44%), Gaps = 22/202 (10%)
Query: 213 IGTGGYGSV---YKAQLPNGKVFALKKLHTS-EELAFIKSFKNEAQVLSQVLHRNIVKLY 268
IG+G G V Y A L A+KKL + K E ++ V H+NI+ L
Sbjct: 32 IGSGAQGIVVAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLL 89
Query: 269 GYCLHKKCM------FLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLH 322
+K + +++ E M+ NL + +ELD + ++ M + +LH
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMD-----ANL-SQVIQMELDHERMSYLLYQMLVGIKHLH 143
Query: 323 HDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYT 382
S IIHRD+ +NI++ S + DFG AR S T T Y APE+
Sbjct: 144 ---SAGIIHRDLKPSNIVVKSDATLKILDFGLARTA-GTSFMMTPYVVTRYYRAPEVILG 199
Query: 383 MVMTEKCDVYSFGVVTLEVLMG 404
M E D++S GV+ E++ G
Sbjct: 200 MGYKENVDIWSVGVIMGEMIKG 221
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 95/213 (44%), Gaps = 26/213 (12%)
Query: 205 EDFDIRYCIGTGGYGSVYKAQ-LPNGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLH 261
+ F+ +GTG +G V + + G +A+K L + +L I+ NE ++L V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 262 RNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHA---- 317
+VKL ++++ EY G +F +L R + A +A
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRR---------IGRFSEPHARFYAAQIV 151
Query: 318 --LAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTL-LAGTYGY 374
YLH S +I+RD+ N++++ + V DFG A+ + RT L GT Y
Sbjct: 152 LTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV----KGRTWXLCGTPEY 204
Query: 375 IAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
+APE+ + + D ++ GV+ E+ G P
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 92/207 (44%), Gaps = 14/207 (6%)
Query: 205 EDFDIRYCIGTGGYGSVYKAQ-LPNGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLH 261
+ F+ +GTG +G V + G +A+K L + +L I+ NE ++L V
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 93
Query: 262 RNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYL 321
+VKL ++++ EY+ G +F +L E + YL
Sbjct: 94 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXE---PHARFYAAQIVLTFEYL 150
Query: 322 HHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTL-LAGTYGYIAPELA 380
H S +I+RD+ N+L++ + V DFG A+ + RT L GT Y+APE+
Sbjct: 151 H---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLAPEII 203
Query: 381 YTMVMTEKCDVYSFGVVTLEVLMGKHP 407
+ + D ++ GV+ E+ G P
Sbjct: 204 LSKGYNKAVDWWALGVLIYEMAAGYPP 230
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 99/226 (43%), Gaps = 20/226 (8%)
Query: 192 DGRIVYEDLIEATEDFDIRYCIGTGGYGSVYKA-QLPNGKVFALK-----KLHTSEELAF 245
D +++ED+ E E IG G + V + G+ FA+K K +S L+
Sbjct: 19 DDDVLFEDVYELCE------VIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLS- 71
Query: 246 IKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDA-VELDW 304
+ K EA + + H +IV+L +++++E+M+ L + DA
Sbjct: 72 TEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSE 131
Query: 305 AKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAF---VADFGTARLLHAD 361
A + ++ + AL Y H + +IIHRD+ + +LL SK + + FG A L
Sbjct: 132 AVASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGES 188
Query: 362 SSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
GT ++APE+ + DV+ GV+ +L G P
Sbjct: 189 GLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLP 234
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 99/226 (43%), Gaps = 20/226 (8%)
Query: 192 DGRIVYEDLIEATEDFDIRYCIGTGGYGSVYKA-QLPNGKVFALK-----KLHTSEELAF 245
D +++ED+ E E IG G + V + G+ FA+K K +S L+
Sbjct: 17 DDDVLFEDVYELCE------VIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLS- 69
Query: 246 IKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDA-VELDW 304
+ K EA + + H +IV+L +++++E+M+ L + DA
Sbjct: 70 TEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSE 129
Query: 305 AKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAF---VADFGTARLLHAD 361
A + ++ + AL Y H + +IIHRD+ + +LL SK + + FG A L
Sbjct: 130 AVASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGES 186
Query: 362 SSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
GT ++APE+ + DV+ GV+ +L G P
Sbjct: 187 GLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLP 232
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 95/213 (44%), Gaps = 26/213 (12%)
Query: 205 EDFDIRYCIGTGGYGSVYKAQ-LPNGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLH 261
+ F+ +GTG +G V + G +A+K L + +L I+ NE ++L V
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 262 RNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHA---- 317
+VKL ++++ EY+ G +F +L R + A +A
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR---------IGRFSEPHARFYAAQIV 152
Query: 318 --LAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTL-LAGTYGY 374
YLH S +I+RD+ N+L++ + V DFG A+ + RT L GT Y
Sbjct: 153 LTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEY 205
Query: 375 IAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
+APE+ + + D ++ GV+ E+ G P
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 95/213 (44%), Gaps = 26/213 (12%)
Query: 205 EDFDIRYCIGTGGYGSVYKAQ-LPNGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLH 261
+ F+ +GTG +G V + G +A+K L + +L I+ NE ++L V
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 262 RNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHA---- 317
+VKL ++++ EY+ G +F +L R + A +A
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR---------IGRFSEPHARFYAAQIV 152
Query: 318 --LAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTL-LAGTYGY 374
YLH S +I+RD+ N+L++ + V DFG A+ + RT L GT Y
Sbjct: 153 LTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEY 205
Query: 375 IAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
+APE+ + + D ++ GV+ E+ G P
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 95/213 (44%), Gaps = 26/213 (12%)
Query: 205 EDFDIRYCIGTGGYGSVYKAQ-LPNGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLH 261
+ F+ +GTG +G V + G +A+K L + +L I+ NE ++L V
Sbjct: 62 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 121
Query: 262 RNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHA---- 317
+VKL ++++ EY+ G +F +L R + A +A
Sbjct: 122 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR---------IGRFSEPHARFYAAQIV 172
Query: 318 --LAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTL-LAGTYGY 374
YLH S +I+RD+ N+L++ + V DFG A+ + RT L GT Y
Sbjct: 173 LTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEY 225
Query: 375 IAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
+APE+ + + D ++ GV+ E+ G P
Sbjct: 226 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 95/213 (44%), Gaps = 26/213 (12%)
Query: 205 EDFDIRYCIGTGGYGSVYKAQ-LPNGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLH 261
+ F+ +GTG +G V + G +A+K L + +L I+ NE ++L V
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 262 RNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHA---- 317
+VKL ++++ EY+ G +F +L R + A +A
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR---------IGRFSEPHARFYAAQIV 152
Query: 318 --LAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTL-LAGTYGY 374
YLH S +I+RD+ N+L++ + V DFG A+ + RT L GT Y
Sbjct: 153 LTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEY 205
Query: 375 IAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
+APE+ + + D ++ GV+ E+ G P
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 100/229 (43%), Gaps = 38/229 (16%)
Query: 209 IRYCIGTGGYGSVYKAQ-LPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVL------- 260
+R + GG+ VY+AQ + +G+ +ALK+L ++EE KN A ++ +V
Sbjct: 32 VRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEE------KNRA-IIQEVCFMKKLSG 84
Query: 261 HRNIVKLYGYCLHKK-------CMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKA 313
H NIV+ K FL+ + +G L L E L + I
Sbjct: 85 HPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQ 144
Query: 314 MAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLL-----HADSSNRTLL 368
A+ ++H P IIHRD+ N+LL+++ + DFG+A + ++ S+ R L
Sbjct: 145 TCRAVQHMHRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRAL 203
Query: 369 A-------GTYGYIAPE---LAYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
T Y PE L + EK D+++ G + + +HP
Sbjct: 204 VEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHP 252
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 92/207 (44%), Gaps = 14/207 (6%)
Query: 205 EDFDIRYCIGTGGYGSVYKAQ-LPNGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLH 261
+ F+ +GTG +G V + + G +A+K L + +L I+ NE ++L V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 262 RNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYL 321
+VKL ++++ EY G +F +L E + YL
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXE---PHARFYAAQIVLTFEYL 157
Query: 322 HHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTL-LAGTYGYIAPELA 380
H S +I+RD+ N++++ + V DFG A+ + RT L GT Y+APE+
Sbjct: 158 H---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV----KGRTWXLCGTPEYLAPEII 210
Query: 381 YTMVMTEKCDVYSFGVVTLEVLMGKHP 407
+ + D ++ GV+ E+ G P
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 91/214 (42%), Gaps = 25/214 (11%)
Query: 204 TEDFDIRYCIGTGGYGS----VYKAQLPNG--KVFALKKLHTSEELAFIKSFKNEAQVLS 257
++ + ++ IG G Y V+KA KV K SEE+ + +
Sbjct: 26 SDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEILLRYGQ------ 79
Query: 258 QVLHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHA 317
H NI+ L K ++L+ E M G L + + E + + ++ +
Sbjct: 80 ---HPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREAS---FVLHTIGKT 133
Query: 318 LAYLHHDCSPSIIHRDISSNNILL---NSKLEAF-VADFGTARLLHADSSNRTLLAGTYG 373
+ YLH S ++HRD+ +NIL + E + DFG A+ L A++ T
Sbjct: 134 VEYLH---SQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTAN 190
Query: 374 YIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
++APE+ E CD++S G++ +L G P
Sbjct: 191 FVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTP 224
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 89/203 (43%), Gaps = 22/203 (10%)
Query: 213 IGTGGYGSV---YKAQLPNGKVFALKKLHTS-EELAFIKSFKNEAQVLSQVLHRNIVKLY 268
IG+G G V Y A L + A+KKL + K E ++ V H+NI+ L
Sbjct: 32 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLL 89
Query: 269 GYCLHKKCM------FLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLH 322
+K + +L+ E M+ NL +ELD + ++ M + +LH
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELMD-----ANL-XQVIQMELDHERMSYLLYQMLXGIKHLH 143
Query: 323 HDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYT 382
S IIHRD+ +NI++ S + DFG AR S T T Y APE+
Sbjct: 144 ---SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTA-GTSFMMTPYVVTRYYRAPEVILG 199
Query: 383 MVMTEKCDVYSFGVVTLEVLMGK 405
M E D++S G + E++ K
Sbjct: 200 MGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 95/213 (44%), Gaps = 26/213 (12%)
Query: 205 EDFDIRYCIGTGGYGSVYKAQ-LPNGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLH 261
+ FD +GTG +G V + +G +A+K L + +L I+ NE ++L V
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 262 RNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHA---- 317
+VKL ++++ EY+ G +F +L R + A +A
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR---------IGRFSEPHARFYAAQIV 151
Query: 318 --LAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTL-LAGTYGY 374
YLH S +I+RD+ N+L++ + V DFG A+ + RT L GT Y
Sbjct: 152 LTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEY 204
Query: 375 IAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
+AP + + + D ++ GV+ E+ G P
Sbjct: 205 LAPAIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 94/213 (44%), Gaps = 25/213 (11%)
Query: 213 IGTGGYGSVYKAQ-LPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYG-- 269
+G G +V++ + G +FA+K + L + E +VL ++ H+NIVKL+
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIE 76
Query: 270 ---YCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCS 326
HK LI E+ GSL+ L +A L ++ + +++ + + +L +
Sbjct: 77 EETTTRHK---VLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN-- 131
Query: 327 PSIIHRDISSNNILL----NSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYT 382
I+HR+I NI+ + + + DFG AR L D L GT Y+ P++
Sbjct: 132 -GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE-DDEQFVXLYGTEEYLHPDMYER 189
Query: 383 MVMTEK--------CDVYSFGVVTLEVLMGKHP 407
V+ + D++S GV G P
Sbjct: 190 AVLRKDHQKKYGATVDLWSIGVTFYHAATGSLP 222
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 89/200 (44%), Gaps = 18/200 (9%)
Query: 213 IGTGGYGSVYKA-QLPNGKVFALKKLHTS-EELAFIKSFKNEAQVLSQVLHRNIVKLYGY 270
IG+G G V A G A+KKL + K E +L V H+NI+ L
Sbjct: 30 IGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNV 89
Query: 271 CLHKKCM------FLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHD 324
+K + +L+ E M+ +L +H +ELD + ++ M + +LH
Sbjct: 90 FTPQKTLEEFQDVYLVMELMD-ANLCQVIH-----MELDHERMSYLLYQMLCGIKHLH-- 141
Query: 325 CSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYTMV 384
S IIHRD+ +NI++ S + DFG AR + + Y Y APE+ M
Sbjct: 142 -SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTASTNFMMTPYVVTRY-YRAPEVILGMG 199
Query: 385 MTEKCDVYSFGVVTLEVLMG 404
E D++S G + E++ G
Sbjct: 200 YKENVDIWSVGCIMGELVKG 219
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 88/203 (43%), Gaps = 22/203 (10%)
Query: 213 IGTGGYGSV---YKAQLPNGKVFALKKLHTS-EELAFIKSFKNEAQVLSQVLHRNIVKLY 268
IG+G G V Y A L A+KKL + K E ++ V H+NI+ L
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLL 89
Query: 269 GYCLHKKCM------FLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLH 322
+K + +L+ E M+ C + +ELD + ++ M + +LH
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQ----MELDHERMSYLLYQMLCGIKHLH 143
Query: 323 HDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYT 382
S IIHRD+ +NI++ S + DFG AR S T T Y APE+
Sbjct: 144 ---SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTA-GTSFMMTPYVVTRYYRAPEVILG 199
Query: 383 MVMTEKCDVYSFGVVTLEVLMGK 405
M E D++S G + E++ K
Sbjct: 200 MGYKENVDIWSVGCIMGEMVRHK 222
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 89/203 (43%), Gaps = 22/203 (10%)
Query: 213 IGTGGYGSV---YKAQLPNGKVFALKKLHTS-EELAFIKSFKNEAQVLSQVLHRNIVKLY 268
IG+G G V Y A L + A+KKL + K E ++ V H+NI+ L
Sbjct: 33 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 90
Query: 269 GYCLHKKCM------FLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLH 322
+K + +L+ E M+ C + +ELD + ++ M + +LH
Sbjct: 91 NVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQ----MELDHERMSYLLYQMLCGIKHLH 144
Query: 323 HDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYT 382
S IIHRD+ +NI++ S + DFG AR S T T Y APE+
Sbjct: 145 ---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA-GTSFMMTPYVVTRYYRAPEVILG 200
Query: 383 MVMTEKCDVYSFGVVTLEVLMGK 405
M E D++S G + E++ K
Sbjct: 201 MGYKENVDIWSVGCIMGEMVRHK 223
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 89/203 (43%), Gaps = 22/203 (10%)
Query: 213 IGTGGYGSV---YKAQLPNGKVFALKKLHTS-EELAFIKSFKNEAQVLSQVLHRNIVKLY 268
IG+G G V Y A L + A+KKL + K E ++ V H+NI+ L
Sbjct: 26 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 83
Query: 269 GYCLHKKCM------FLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLH 322
+K + +L+ E M+ C + +ELD + ++ M + +LH
Sbjct: 84 NVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQ----MELDHERMSYLLYQMLCGIKHLH 137
Query: 323 HDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYT 382
S IIHRD+ +NI++ S + DFG AR S T T Y APE+
Sbjct: 138 ---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA-GTSFMMTPYVVTRYYRAPEVILG 193
Query: 383 MVMTEKCDVYSFGVVTLEVLMGK 405
M E D++S G + E++ K
Sbjct: 194 MGYKENVDIWSVGCIMGEMVRHK 216
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 89/203 (43%), Gaps = 22/203 (10%)
Query: 213 IGTGGYGSV---YKAQLPNGKVFALKKLHTS-EELAFIKSFKNEAQVLSQVLHRNIVKLY 268
IG+G G V Y A L + A+KKL + K E ++ V H+NI+ L
Sbjct: 32 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 89
Query: 269 GYCLHKKCM------FLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLH 322
+K + +L+ E M+ C + +ELD + ++ M + +LH
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQ----MELDHERMSYLLYQMLCGIKHLH 143
Query: 323 HDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYT 382
S IIHRD+ +NI++ S + DFG AR S T T Y APE+
Sbjct: 144 ---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA-GTSFMMTPYVVTRYYRAPEVILG 199
Query: 383 MVMTEKCDVYSFGVVTLEVLMGK 405
M E D++S G + E++ K
Sbjct: 200 MGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 116/272 (42%), Gaps = 33/272 (12%)
Query: 207 FDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSE-ELAFIKSFKNEAQVLSQVLHRN-- 263
+ I IG+GG V++ +++A+K ++ E + + S++NE L+++ +
Sbjct: 30 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDK 89
Query: 264 IVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHH 323
I++LY Y + + ++++ ME G++ N + +D +R + K M A+ +H
Sbjct: 90 IIRLYDYEITDQYIYMV---MECGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIHQ 145
Query: 324 DCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSN--RTLLAGTYGYIAPELAY 381
I+H D+ N L+ + + DFG A + D + GT Y+ PE
Sbjct: 146 H---GIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDXXXVVKDSQVGTVNYMPPEAIK 201
Query: 382 TMVMTEK-----------CDVYSFGVVTLEVLMGKHPRDIXXXXXXXXDPKIMLIDVLDQ 430
M + + DV+S G + + GK P +ID +
Sbjct: 202 DMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHA---IIDPNHE 258
Query: 431 RLPPPVDRKVIRDILLISTVSFACLQSNPKSR 462
P + K ++D+L CL+ +PK R
Sbjct: 259 IEFPDIPEKDLQDVLK------CCLKRDPKQR 284
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 89/203 (43%), Gaps = 22/203 (10%)
Query: 213 IGTGGYGSV---YKAQLPNGKVFALKKLHTS-EELAFIKSFKNEAQVLSQVLHRNIVKLY 268
IG+G G V Y A L + A+KKL + K E ++ V H+NI+ L
Sbjct: 25 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 82
Query: 269 GYCLHKKCM------FLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLH 322
+K + +L+ E M+ C + +ELD + ++ M + +LH
Sbjct: 83 NVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQ----MELDHERMSYLLYQMLCGIKHLH 136
Query: 323 HDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYT 382
S IIHRD+ +NI++ S + DFG AR S T T Y APE+
Sbjct: 137 ---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA-GTSFMMTPYVVTRYYRAPEVILG 192
Query: 383 MVMTEKCDVYSFGVVTLEVLMGK 405
M E D++S G + E++ K
Sbjct: 193 MGYKENVDIWSVGCIMGEMVRHK 215
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 89/203 (43%), Gaps = 22/203 (10%)
Query: 213 IGTGGYGSV---YKAQLPNGKVFALKKLHTS-EELAFIKSFKNEAQVLSQVLHRNIVKLY 268
IG+G G V Y A L + A+KKL + K E ++ V H+NI+ L
Sbjct: 31 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 88
Query: 269 GYCLHKKCM------FLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLH 322
+K + +L+ E M+ C + +ELD + ++ M + +LH
Sbjct: 89 NVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQ----MELDHERMSYLLYQMLCGIKHLH 142
Query: 323 HDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYT 382
S IIHRD+ +NI++ S + DFG AR S T T Y APE+
Sbjct: 143 ---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA-GTSFMMTPYVVTRYYRAPEVILG 198
Query: 383 MVMTEKCDVYSFGVVTLEVLMGK 405
M E D++S G + E++ K
Sbjct: 199 MGYKENVDIWSVGCIMGEMVRHK 221
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 89/203 (43%), Gaps = 22/203 (10%)
Query: 213 IGTGGYGSV---YKAQLPNGKVFALKKLHTS-EELAFIKSFKNEAQVLSQVLHRNIVKLY 268
IG+G G V Y A L + A+KKL + K E ++ V H+NI+ L
Sbjct: 33 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 90
Query: 269 GYCLHKKCM------FLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLH 322
+K + +L+ E M+ C + +ELD + ++ M + +LH
Sbjct: 91 NVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQ----MELDHERMSYLLYQMLCGIKHLH 144
Query: 323 HDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYT 382
S IIHRD+ +NI++ S + DFG AR S T T Y APE+
Sbjct: 145 ---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA-GTSFMMTPYVVTRYYRAPEVILG 200
Query: 383 MVMTEKCDVYSFGVVTLEVLMGK 405
M E D++S G + E++ K
Sbjct: 201 MGYKENVDIWSVGCIMGEMVRHK 223
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 89/203 (43%), Gaps = 22/203 (10%)
Query: 213 IGTGGYG---SVYKAQLPNGKVFALKKLHTS-EELAFIKSFKNEAQVLSQVLHRNIVKLY 268
IG+G G + Y A L + A+KKL + K E ++ V H+NI+ L
Sbjct: 70 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 127
Query: 269 GYCLHKKCM------FLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLH 322
+K + +L+ E M+ C + +ELD + ++ M + +LH
Sbjct: 128 NVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQ----MELDHERMSYLLYQMLCGIKHLH 181
Query: 323 HDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYT 382
S IIHRD+ +NI++ S + DFG AR S T T Y APE+
Sbjct: 182 ---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA-GTSFMMTPYVVTRYYRAPEVILG 237
Query: 383 MVMTEKCDVYSFGVVTLEVLMGK 405
M E D++S G + E++ K
Sbjct: 238 MGYKENVDIWSVGCIMGEMVRHK 260
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 91/214 (42%), Gaps = 25/214 (11%)
Query: 204 TEDFDIRYCIGTGGYGS----VYKAQLPNG--KVFALKKLHTSEELAFIKSFKNEAQVLS 257
++ + ++ IG G Y V+KA KV K SEE+ + +
Sbjct: 26 SDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEILLRYGQ------ 79
Query: 258 QVLHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHA 317
H NI+ L K ++L+ E M G L + + E + + ++ +
Sbjct: 80 ---HPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREAS---FVLHTIGKT 133
Query: 318 LAYLHHDCSPSIIHRDISSNNILL---NSKLEAF-VADFGTARLLHADSSNRTLLAGTYG 373
+ YLH S ++HRD+ +NIL + E + DFG A+ L A++ T
Sbjct: 134 VEYLH---SQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTAN 190
Query: 374 YIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
++APE+ E CD++S G++ +L G P
Sbjct: 191 FVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTP 224
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 89/203 (43%), Gaps = 22/203 (10%)
Query: 213 IGTGGYGSV---YKAQLPNGKVFALKKLHTS-EELAFIKSFKNEAQVLSQVLHRNIVKLY 268
IG+G G V Y A L + A+KKL + K E ++ V H+NI+ L
Sbjct: 26 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 83
Query: 269 GYCLHKKCM------FLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLH 322
+K + +L+ E M+ C + +ELD + ++ M + +LH
Sbjct: 84 NVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQ----MELDHERMSYLLYQMLCGIKHLH 137
Query: 323 HDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYT 382
S IIHRD+ +NI++ S + DFG AR S T T Y APE+
Sbjct: 138 ---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA-GTSFMMTPYVVTRYYRAPEVILG 193
Query: 383 MVMTEKCDVYSFGVVTLEVLMGK 405
M E D++S G + E++ K
Sbjct: 194 MGYKENVDIWSVGCIMGEMVRHK 216
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 89/203 (43%), Gaps = 22/203 (10%)
Query: 213 IGTGGYGSV---YKAQLPNGKVFALKKLHTS-EELAFIKSFKNEAQVLSQVLHRNIVKLY 268
IG+G G V Y A L + A+KKL + K E ++ V H+NI+ L
Sbjct: 32 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 89
Query: 269 GYCLHKKCM------FLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLH 322
+K + +L+ E M+ C + +ELD + ++ M + +LH
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQ----MELDHERMSYLLYQMLCGIKHLH 143
Query: 323 HDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYT 382
S IIHRD+ +NI++ S + DFG AR S T T Y APE+
Sbjct: 144 ---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA-GTSFMMTPYVVTRYYRAPEVILG 199
Query: 383 MVMTEKCDVYSFGVVTLEVLMGK 405
M E D++S G + E++ K
Sbjct: 200 MGYKENVDIWSVGCIMGEMVRHK 222
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 94/213 (44%), Gaps = 26/213 (12%)
Query: 205 EDFDIRYCIGTGGYGSVYKAQ-LPNGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLH 261
+ F+ +GTG +G V + + G +A+K L + +L I+ NE ++L V
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 262 RNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHA---- 317
+ KL ++++ EY G +F +L R + A +A
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRR---------IGRFSEPHARFYAAQIV 152
Query: 318 --LAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTL-LAGTYGY 374
YLH S +I+RD+ N++++ + V DFG A+ + RT L GT Y
Sbjct: 153 LTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV----KGRTWXLCGTPEY 205
Query: 375 IAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
+APE+ + + D ++ GV+ E+ G P
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 88/202 (43%), Gaps = 22/202 (10%)
Query: 213 IGTGGYG---SVYKAQLPNGKVFALKKLHTS-EELAFIKSFKNEAQVLSQVLHRNIVKLY 268
IG+G G + Y A L A+KKL + K E ++ V H+NI+ L
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 269 GYCLHKKCM------FLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLH 322
+K + +++ E M+ C + +ELD + ++ M + +LH
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQ----MELDHERMSYLLYQMLCGIKHLH 143
Query: 323 HDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYT 382
S IIHRD+ +NI++ S + DFG AR S T T Y APE+
Sbjct: 144 ---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA-GTSFMMTPYVVTRYYRAPEVILG 199
Query: 383 MVMTEKCDVYSFGVVTLEVLMG 404
M E D++S G + E++ G
Sbjct: 200 MGYKENVDIWSVGCIMGEMIKG 221
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 94/213 (44%), Gaps = 26/213 (12%)
Query: 205 EDFDIRYCIGTGGYGSVYKAQ-LPNGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLH 261
+ F+ +GTG +G V + + G +A+K L + +L I+ NE ++L V
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 262 RNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHA---- 317
+ KL ++++ EY G +F +L R + A +A
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRR---------IGRFSEPHARFYAAQIV 152
Query: 318 --LAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTL-LAGTYGY 374
YLH S +I+RD+ N++++ + V DFG A+ + RT L GT Y
Sbjct: 153 LTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV----KGRTWXLCGTPEY 205
Query: 375 IAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
+APE+ + + D ++ GV+ E+ G P
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 95/213 (44%), Gaps = 26/213 (12%)
Query: 205 EDFDIRYCIGTGGYGSVYKAQ-LPNGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLH 261
+ FD +GTG +G V + +G +A+K L + +L I+ NE ++L V
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 262 RNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHA---- 317
+VKL ++++ EY+ G +F +L R + A +A
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR---------IGRFSEPHARFYAAQIV 151
Query: 318 --LAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTL-LAGTYGY 374
YLH S +I+RD+ N+L++ + V DFG A+ + RT L GT
Sbjct: 152 LTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEA 204
Query: 375 IAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
+APE+ + + D ++ GV+ E+ G P
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 94/213 (44%), Gaps = 26/213 (12%)
Query: 205 EDFDIRYCIGTGGYGSVYKAQ-LPNGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLH 261
+ F+ +GTG +G V + G +A+K L + +L I+ NE ++ V
Sbjct: 42 DQFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVNF 101
Query: 262 RNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHA---- 317
+VKL ++++ EY G +F +L R + A +A
Sbjct: 102 PFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRR---------IGRFSEPHARFYAAQIV 152
Query: 318 --LAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTL-LAGTYGY 374
YLH S +I+RD+ N+L++ + VADFG A+ + RT L GT Y
Sbjct: 153 LTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRV----KGRTWXLCGTPEY 205
Query: 375 IAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
+APE+ + + D ++ GV+ E+ G P
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 95/213 (44%), Gaps = 25/213 (11%)
Query: 213 IGTGGYGSVYKAQ-LPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYG-- 269
+G G +V++ + G +FA+K + L + E +VL ++ H+NIVKL+
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIE 76
Query: 270 ---YCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCS 326
HK LI E+ GSL+ L +A L ++ + +++ + + +L +
Sbjct: 77 EETTTRHK---VLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN-- 131
Query: 327 PSIIHRDISSNNILL----NSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYT 382
I+HR+I NI+ + + + DFG AR L D +L GT Y+ P++
Sbjct: 132 -GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLY-GTEEYLHPDMYER 189
Query: 383 MVMTE--------KCDVYSFGVVTLEVLMGKHP 407
V+ + D++S GV G P
Sbjct: 190 AVLRKDHQKKYGATVDLWSIGVTFYHAATGSLP 222
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 88/202 (43%), Gaps = 22/202 (10%)
Query: 213 IGTGGYG---SVYKAQLPNGKVFALKKLHTS-EELAFIKSFKNEAQVLSQVLHRNIVKLY 268
IG+G G + Y A L A+KKL + K E ++ V H+NI+ L
Sbjct: 33 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 90
Query: 269 GYCLHKKCM------FLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLH 322
+K + +++ E M+ C + +ELD + ++ M + +LH
Sbjct: 91 NVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQ----MELDHERMSYLLYQMLCGIKHLH 144
Query: 323 HDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYT 382
S IIHRD+ +NI++ S + DFG AR S T T Y APE+
Sbjct: 145 ---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA-GTSFMMTPYVVTRYYRAPEVILG 200
Query: 383 MVMTEKCDVYSFGVVTLEVLMG 404
M E D++S G + E++ G
Sbjct: 201 MGYKENVDIWSVGCIMGEMIKG 222
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 88/202 (43%), Gaps = 22/202 (10%)
Query: 213 IGTGGYG---SVYKAQLPNGKVFALKKLHTS-EELAFIKSFKNEAQVLSQVLHRNIVKLY 268
IG+G G + Y A L A+KKL + K E ++ V H+NI+ L
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 269 GYCLHKKCM------FLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLH 322
+K + +++ E M+ C + +ELD + ++ M + +LH
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQ----MELDHERMSYLLYQMLCGIKHLH 143
Query: 323 HDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYT 382
S IIHRD+ +NI++ S + DFG AR S T T Y APE+
Sbjct: 144 ---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA-GTSFMMTPYVVTRYYRAPEVILG 199
Query: 383 MVMTEKCDVYSFGVVTLEVLMG 404
M E D++S G + E++ G
Sbjct: 200 MGYKENVDIWSVGCIMGEMIKG 221
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 73/147 (49%), Gaps = 16/147 (10%)
Query: 204 TEDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEEL---------AFIKSFKNEAQ 254
ED +G G + ++K +V +LH +E L + +SF A
Sbjct: 7 NEDLIFNESLGQGTFTKIFKGV--RREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAAS 64
Query: 255 VLSQVLHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAM 314
++S++ H+++V YG C L+ E+++ GSL L N++ + + W ++ + K +
Sbjct: 65 MMSKLSHKHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINILW--KLEVAKQL 122
Query: 315 AHALAYLHHDCSPSIIHRDISSNNILL 341
A A+ +L + ++IH ++ + NILL
Sbjct: 123 AWAMHFLEEN---TLIHGNVCAKNILL 146
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 88/202 (43%), Gaps = 22/202 (10%)
Query: 213 IGTGGYG---SVYKAQLPNGKVFALKKLHTS-EELAFIKSFKNEAQVLSQVLHRNIVKLY 268
IG+G G + Y A L A+KKL + K E ++ V H+NI+ L
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 269 GYCLHKKCM------FLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLH 322
+K + +++ E M+ C + +ELD + ++ M + +LH
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQ----MELDHERMSYLLYQMLCGIKHLH 143
Query: 323 HDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYT 382
S IIHRD+ +NI++ S + DFG AR S T T Y APE+
Sbjct: 144 ---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA-GTSFMMTPEVVTRYYRAPEVILG 199
Query: 383 MVMTEKCDVYSFGVVTLEVLMG 404
M E D++S G + E++ G
Sbjct: 200 MGYKENVDIWSVGCIMGEMIKG 221
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 74/147 (50%), Gaps = 16/147 (10%)
Query: 204 TEDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEEL---------AFIKSFKNEAQ 254
ED +G G + ++K +V +LH +E L + +SF A
Sbjct: 7 NEDLIFNESLGQGTFTKIFKGV--RREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAAS 64
Query: 255 VLSQVLHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAM 314
++S++ H+++V YG C+ L+ E+++ GSL L N++ + + W ++ + K +
Sbjct: 65 MMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILW--KLEVAKQL 122
Query: 315 AHALAYLHHDCSPSIIHRDISSNNILL 341
A A+ +L + ++IH ++ + NILL
Sbjct: 123 AAAMHFLEEN---TLIHGNVCAKNILL 146
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 89/203 (43%), Gaps = 22/203 (10%)
Query: 213 IGTGGYG---SVYKAQLPNGKVFALKKLHTS-EELAFIKSFKNEAQVLSQVLHRNIVKLY 268
IG+G G + Y A L + A+KKL + K E ++ V H+NI+ L
Sbjct: 70 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 127
Query: 269 GYCLHKKCM------FLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLH 322
+K + +L+ E M+ C + +ELD + ++ M + +LH
Sbjct: 128 NVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQ----MELDHERMSYLLYQMLCGIKHLH 181
Query: 323 HDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYT 382
S IIHRD+ +NI++ S + DFG AR S T T Y APE+
Sbjct: 182 ---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA-GTSFMMTPYVVTRYYRAPEVILG 237
Query: 383 MVMTEKCDVYSFGVVTLEVLMGK 405
M E D++S G + E++ K
Sbjct: 238 MGYKENVDIWSVGCIMGEMVRHK 260
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 89/203 (43%), Gaps = 22/203 (10%)
Query: 213 IGTGGYGSV---YKAQLPNGKVFALKKLHTS-EELAFIKSFKNEAQVLSQVLHRNIVKLY 268
IG+G G V Y A L + A+KKL + K E ++ V H+NI+ L
Sbjct: 25 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 82
Query: 269 GYCLHKKCM------FLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLH 322
+K + +L+ E M+ NL +ELD + ++ M + +LH
Sbjct: 83 NVFTPQKTLEEFQDVYLVMELMD-----ANL-XQVIQMELDHERMSYLLYQMLXGIKHLH 136
Query: 323 HDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYT 382
S IIHRD+ +NI++ S + DFG AR S T T Y APE+
Sbjct: 137 ---SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTA-GTSFMMTPYVVTRYYRAPEVILG 192
Query: 383 MVMTEKCDVYSFGVVTLEVLMGK 405
M E D++S G + E++ K
Sbjct: 193 MGYKENVDIWSVGCIMGEMVRHK 215
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 87/202 (43%), Gaps = 22/202 (10%)
Query: 213 IGTGGYG---SVYKAQLPNGKVFALKKLHTS-EELAFIKSFKNEAQVLSQVLHRNIVKLY 268
IG+G G + Y A L A+KKL + K E ++ V H+NI+ L
Sbjct: 34 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 91
Query: 269 GYCLHKKCM------FLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLH 322
+K + +++ E M+ C + +ELD + ++ M + +LH
Sbjct: 92 NVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQ----MELDHERMSYLLYQMLCGIKHLH 145
Query: 323 HDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYT 382
S IIHRD+ +NI++ S + DFG AR + Y Y APE+
Sbjct: 146 ---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMVPFVVTRY-YRAPEVILG 201
Query: 383 MVMTEKCDVYSFGVVTLEVLMG 404
M E D++S G + E++ G
Sbjct: 202 MGYKENVDIWSVGCIMGEMIKG 223
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 91/207 (43%), Gaps = 14/207 (6%)
Query: 205 EDFDIRYCIGTGGYGSVYKAQ-LPNGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLH 261
+ F+ +GTG +G V + + G +A+K L + +L I+ NE ++L V
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 262 RNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYL 321
+ KL ++++ EY G +F +L E + YL
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXE---PHARFYAAQIVLTFEYL 158
Query: 322 HHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTL-LAGTYGYIAPELA 380
H S +I+RD+ N++++ + V DFG A+ + RT L GT Y+APE+
Sbjct: 159 H---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV----KGRTWXLCGTPEYLAPEII 211
Query: 381 YTMVMTEKCDVYSFGVVTLEVLMGKHP 407
+ + D ++ GV+ E+ G P
Sbjct: 212 LSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 94/213 (44%), Gaps = 26/213 (12%)
Query: 205 EDFDIRYCIGTGGYGSVYKAQ-LPNGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLH 261
+ F+ +GTG +G V + G +A+K L + +L I+ NE ++L V
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 262 RNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHA---- 317
+VKL ++++ EY G +F +L R + A +A
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRR---------IGRFSEPHARFYAAQIV 152
Query: 318 --LAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTL-LAGTYGY 374
YLH S +I+RD+ N++++ + V DFG A+ + RT L GT Y
Sbjct: 153 LTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV----KGRTWXLCGTPEY 205
Query: 375 IAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
+APE+ + + D ++ GV+ E+ G P
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 89/203 (43%), Gaps = 22/203 (10%)
Query: 213 IGTGGYGSV---YKAQLPNGKVFALKKLHTS-EELAFIKSFKNEAQVLSQVLHRNIVKLY 268
IG+G G V Y A L + A+KKL + K E ++ V H+NI+ L
Sbjct: 32 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 89
Query: 269 GYCLHKKCM------FLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLH 322
+K + +L+ E M+ NL +ELD + ++ M + +LH
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELMD-----ANL-XQVIQMELDHERMSYLLYQMLXGIKHLH 143
Query: 323 HDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYT 382
S IIHRD+ +NI++ S + DFG AR S T T Y APE+
Sbjct: 144 ---SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTA-GTSFMMTPYVVTRYYRAPEVILG 199
Query: 383 MVMTEKCDVYSFGVVTLEVLMGK 405
M E D++S G + E++ K
Sbjct: 200 MGYKENVDIWSVGCIMGEMVRHK 222
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 118/272 (43%), Gaps = 33/272 (12%)
Query: 207 FDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSE-ELAFIKSFKNEAQVLSQVLHRN-- 263
+ I IG+GG V++ +++A+K ++ E + + S++NE L+++ +
Sbjct: 58 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDK 117
Query: 264 IVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHH 323
I++LY Y + + ++++ ME G++ N + +D +R + K M A+ +H
Sbjct: 118 IIRLYDYEITDQYIYMV---MECGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIHQ 173
Query: 324 DCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSN--RTLLAGTYGYIAPELAY 381
I+H D+ N L+ + + DFG A + D+++ + G Y+ PE
Sbjct: 174 H---GIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIK 229
Query: 382 TMVMTEK-----------CDVYSFGVVTLEVLMGKHPRDIXXXXXXXXDPKIMLIDVLDQ 430
M + + DV+S G + + GK P +ID +
Sbjct: 230 DMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLH---AIIDPNHE 286
Query: 431 RLPPPVDRKVIRDILLISTVSFACLQSNPKSR 462
P + K ++D+L CL+ +PK R
Sbjct: 287 IEFPDIPEKDLQDVLK------CCLKRDPKQR 312
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 100/225 (44%), Gaps = 31/225 (13%)
Query: 196 VYEDLIEATEDFDIRYCIGTGGYG----SVYKAQLPNGKVFALK-----KLHTSEELAFI 246
++ + I+ T+ ++++ IG G Y ++KA FA+K K +EE+ +
Sbjct: 13 LHRNSIQFTDGYEVKEDIGVGSYSVCKRCIHKA---TNMEFAVKIIDKSKRDPTEEIEIL 69
Query: 247 KSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAK 306
+ H NI+ L K ++++ E M+ G L + + E + +
Sbjct: 70 LRYGQ---------HPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASA 120
Query: 307 RVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILL---NSKLEAF-VADFGTARLLHADS 362
++ + + YLH + ++HRD+ +NIL + E+ + DFG A+ L A++
Sbjct: 121 ---VLFTITKTVEYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAEN 174
Query: 363 SNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
T ++APE+ CD++S GV+ +L G P
Sbjct: 175 GLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTP 219
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 89/202 (44%), Gaps = 22/202 (10%)
Query: 213 IGTGGYGSV---YKAQLPNGKVFALKKLHTS-EELAFIKSFKNEAQVLSQVLHRNIVKLY 268
IG+G G V Y A L A+KKL + K E ++ V H+NI+ L
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLL 89
Query: 269 GYCLHKKCM------FLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLH 322
+K + +++ E M+ NL + +ELD + ++ M + +LH
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMD-----ANL-SQVIQMELDHERMSYLLYQMLVGIKHLH 143
Query: 323 HDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYT 382
S IIHRD+ +NI++ S + DFG AR S T T Y APE+
Sbjct: 144 ---SAGIIHRDLKPSNIVVKSDATLKILDFGLARTA-GTSFMMTPYVVTRYYRAPEVILG 199
Query: 383 MVMTEKCDVYSFGVVTLEVLMG 404
M E D++S G + E++ G
Sbjct: 200 MGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 89/202 (44%), Gaps = 22/202 (10%)
Query: 213 IGTGGYG---SVYKAQLPNGKVFALKKLHTS-EELAFIKSFKNEAQVLSQVLHRNIVKLY 268
IG+G G + Y A L A+KKL + K E ++ V H+NI+ L
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLL 89
Query: 269 GYCLHKKCM------FLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLH 322
+K + +++ E M+ NL + +ELD + ++ M + +LH
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMD-----ANL-SQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 323 HDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYT 382
S IIHRD+ +NI++ S + DFG AR S T T Y APE+
Sbjct: 144 ---SAGIIHRDLKPSNIVVKSDATLKILDFGLARTA-GTSFMMTPYVVTRYYRAPEVILG 199
Query: 383 MVMTEKCDVYSFGVVTLEVLMG 404
M E D++S G + E++ G
Sbjct: 200 MGYKENVDIWSVGCIMGEMIKG 221
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 103/232 (44%), Gaps = 52/232 (22%)
Query: 213 IGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVL-HRNIVKLYGYC 271
+G G G+V G+ A+K++ + F E ++L++ H N+++ Y
Sbjct: 23 LGYGSSGTVVFQGSFQGRPVAVKRML----IDFCDIALMEIKLLTESDDHPNVIRYYCSE 78
Query: 272 LHKKCMFLIYEYMERGSLFCNLHNNEDAVE--------LDWAKRVN---IVKAMAHALAY 320
+ +++ E CNL N +D VE L K N +++ +A +A+
Sbjct: 79 TTDRFLYIALE-------LCNL-NLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAH 130
Query: 321 LHHDCSPSIIHRDISSNNILLNS-------------KLEAFVADFGTARLLHA-DSSNRT 366
LH S IIHRD+ NIL+++ L ++DFG + L + SS RT
Sbjct: 131 LH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRT 187
Query: 367 LL---AGTYGYIAPE-------LAYTMVMTEKCDVYSFGVVTLEVL-MGKHP 407
L +GT G+ APE L +T D++S G V +L GKHP
Sbjct: 188 NLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHP 239
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 89/203 (43%), Gaps = 22/203 (10%)
Query: 213 IGTGGYGSV---YKAQLPNGKVFALKKLHTS-EELAFIKSFKNEAQVLSQVLHRNIVKLY 268
IG+G G V Y A L + A+KKL + K E ++ V H+NI+ L
Sbjct: 32 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLL 89
Query: 269 GYCLHKKCM------FLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLH 322
+K + +L+ E M+ NL +ELD + ++ M + +LH
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELMD-----ANL-XQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 323 HDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYT 382
S IIHRD+ +NI++ S + DFG AR S T T Y APE+
Sbjct: 144 ---SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTA-GTSFMMTPYVVTRYYRAPEVILG 199
Query: 383 MVMTEKCDVYSFGVVTLEVLMGK 405
M E D++S G + E++ K
Sbjct: 200 MGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 89/202 (44%), Gaps = 22/202 (10%)
Query: 213 IGTGGYG---SVYKAQLPNGKVFALKKLHTS-EELAFIKSFKNEAQVLSQVLHRNIVKLY 268
IG+G G + Y A L A+KKL + K E ++ V H+NI+ L
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 269 GYCLHKKCM------FLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLH 322
+K + +++ E M+ NL + +ELD + ++ M + +LH
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMD-----ANL-SQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 323 HDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYT 382
S IIHRD+ +NI++ S + DFG AR S T T Y APE+
Sbjct: 144 ---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA-GTSFMMTPYVVTRYYRAPEVILG 199
Query: 383 MVMTEKCDVYSFGVVTLEVLMG 404
M E D++S G + E++ G
Sbjct: 200 MGYKENVDIWSVGCIMGEMIKG 221
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 87/200 (43%), Gaps = 27/200 (13%)
Query: 213 IGTGGYGSVYKAQ-LPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQV-LHRNIVKLYGY 270
+G G YG V+K + +G+++A+K+ ++ + K+ A+ L++V H + +
Sbjct: 65 LGHGSYGEVFKVRSKEDGRLYAVKR-----SMSPFRGPKDRARKLAEVGSHEKVGQ---- 115
Query: 271 CLHKKCMFLIYEYMERGSLFCNL---------HNNEDAVELDWAKRVNIVKAMAHALAYL 321
H C+ L + E G L+ H L A+ ++ ALA+L
Sbjct: 116 --HPCCVRLEQAWEEGGILYLQTELCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHL 173
Query: 322 HHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAY 381
H S ++H D+ NI L + + DFG L + + G Y+APEL
Sbjct: 174 H---SQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGE-VQEGDPRYMAPELLQ 229
Query: 382 TMVMTEKCDVYSFGVVTLEV 401
T DV+S G+ LEV
Sbjct: 230 GSYGT-AADVFSLGLTILEV 248
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 89/202 (44%), Gaps = 22/202 (10%)
Query: 213 IGTGGYG---SVYKAQLPNGKVFALKKLHTS-EELAFIKSFKNEAQVLSQVLHRNIVKLY 268
IG+G G + Y A L A+KKL + K E ++ V H+NI+ L
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 269 GYCLHKKCM------FLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLH 322
+K + +++ E M+ NL + +ELD + ++ M + +LH
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMD-----ANL-SQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 323 HDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYT 382
S IIHRD+ +NI++ S + DFG AR S T T Y APE+
Sbjct: 144 ---SAGIIHRDLKPSNIVVKSDATLKILDFGLARTA-GTSFMMTPYVVTRYYRAPEVILG 199
Query: 383 MVMTEKCDVYSFGVVTLEVLMG 404
M E D++S G + E++ G
Sbjct: 200 MGYKENVDIWSVGCIMGEMIKG 221
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 96/231 (41%), Gaps = 42/231 (18%)
Query: 207 FDIRYCIGTGGYGSVYKA-QLPNGKVFALKK-LHTSEELAFIKSFKNEAQVLSQVLHRNI 264
++IR+ IGTG YG V +A +V A+KK L E+L K E +L+++ H ++
Sbjct: 55 YEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHV 114
Query: 265 VKLYGYCLHKKC-----MFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALA 319
VK+ + K ++++ E + S F L V L ++ + +
Sbjct: 115 VKVLDIVIPKDVEKFDELYVVLEIAD--SDFKKLFRT--PVYLTELHIKTLLYNLLVGVK 170
Query: 320 YLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLL--------------------- 358
Y+H S I+HRD+ N L+N V DFG AR +
Sbjct: 171 YVH---SAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNL 227
Query: 359 ----HADSSNRTLLAG--TYGYIAPELAYTMV-MTEKCDVYSFGVVTLEVL 402
H + R L T Y APEL TE DV+S G + E+L
Sbjct: 228 VTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELL 278
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 97/208 (46%), Gaps = 25/208 (12%)
Query: 213 IGTGGYGSVYKAQL-PNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRN----IVKL 267
+G+G G V+K + G V A+K++ S K + V VL + IV+
Sbjct: 33 MGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDV---VLKSHDCPYIVQC 89
Query: 268 YGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRV--NIVKAMAHALAYLHHDC 325
+G + +F+ E M G+ L ++ +R+ + A+ AL YL
Sbjct: 90 FGTFITNTDVFIAMELM--GTCAEKLKKR---MQGPIPERILGKMTVAIVKALYYLKE-- 142
Query: 326 SPSIIHRDISSNNILLNSKLEAFVADFG-TARLLHADSSNRTLLAGTYGYIAPELAYTMV 384
+IHRD+ +NILL+ + + + DFG + RL+ + +R+ AG Y+APE
Sbjct: 143 KHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRS--AGCAAYMAPERIDPPD 200
Query: 385 MTE-----KCDVYSFGVVTLEVLMGKHP 407
T+ + DV+S G+ +E+ G+ P
Sbjct: 201 PTKPDYDIRADVWSLGISLVELATGQFP 228
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Query: 326 SPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSS--NRTLLAGTYGYIAPELAYTM 383
S IHRD+++ NILL+ K + DFG AR ++ D + ++APE +
Sbjct: 216 SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDR 275
Query: 384 VMTEKCDVYSFGVVTLEVL-MGKHP 407
V T + DV+SFGV+ E+ +G P
Sbjct: 276 VYTIQSDVWSFGVLLWEIFSLGASP 300
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 103/221 (46%), Gaps = 31/221 (14%)
Query: 200 LIEATEDFDIRYCIGTGGYG--SVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLS 257
++ ++ +++ IG G +G + + + N ++ A+K + E++ ++ K E
Sbjct: 14 IMHDSDRYELVKDIGAGNFGVARLMRDKQAN-ELVAVKYIERGEKID--ENVKREIINHR 70
Query: 258 QVLHRNIVKLYGYCLHKKCMFLIYEYMERGSLF---CNLHN-NEDAVELDWAKRVNIVKA 313
+ H NIV+ L + ++ EY G LF CN +ED + + ++ V +
Sbjct: 71 SLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGV-S 129
Query: 314 MAHALAYLHHDCSPSIIHRDISSNNILLNS----KLEAFVADFG--TARLLHADSSNRTL 367
AHA+ + HRD+ N LL+ +L+ +ADFG A +LH+ +
Sbjct: 130 YAHAM---------QVAHRDLKLENTLLDGSPAPRLK--IADFGYSKASVLHSQPKS--- 175
Query: 368 LAGTYGYIAPELAYTMVMTEK-CDVYSFGVVTLEVLMGKHP 407
GT YIAPE+ K DV+S GV +L+G +P
Sbjct: 176 AVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYP 216
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Query: 326 SPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSS--NRTLLAGTYGYIAPELAYTM 383
S IHRD+++ NILL+ K + DFG AR ++ D + ++APE +
Sbjct: 218 SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDR 277
Query: 384 VMTEKCDVYSFGVVTLEVL-MGKHP 407
V T + DV+SFGV+ E+ +G P
Sbjct: 278 VYTIQSDVWSFGVLLWEIFSLGASP 302
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Query: 326 SPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSS--NRTLLAGTYGYIAPELAYTM 383
S IHRD+++ NILL+ K + DFG AR ++ D + ++APE +
Sbjct: 211 SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDR 270
Query: 384 VMTEKCDVYSFGVVTLEVL-MGKHP 407
V T + DV+SFGV+ E+ +G P
Sbjct: 271 VYTIQSDVWSFGVLLWEIFSLGASP 295
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Query: 326 SPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSS--NRTLLAGTYGYIAPELAYTM 383
S IHRD+++ NILL+ K + DFG AR ++ D + ++APE +
Sbjct: 209 SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDR 268
Query: 384 VMTEKCDVYSFGVVTLEVL-MGKHP 407
V T + DV+SFGV+ E+ +G P
Sbjct: 269 VYTIQSDVWSFGVLLWEIFSLGASP 293
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 88/200 (44%), Gaps = 18/200 (9%)
Query: 213 IGTGGYGSVYKA-QLPNGKVFALKKLHTS-EELAFIKSFKNEAQVLSQVLHRNIVKLYGY 270
IG+G G V A G A+KKL + K E +L V H+NI+ L
Sbjct: 32 IGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNV 91
Query: 271 CLHKKCM------FLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHD 324
+K + +L+ E M+ +L +H +ELD + ++ M + +LH
Sbjct: 92 FTPQKTLEEFQDVYLVMELMD-ANLCQVIH-----MELDHERMSYLLYQMLCGIKHLH-- 143
Query: 325 CSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYTMV 384
S IIHRD+ +NI++ S + DFG AR + + Y Y APE+ M
Sbjct: 144 -SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFMMTPYVVTRY-YRAPEVILGMG 201
Query: 385 MTEKCDVYSFGVVTLEVLMG 404
D++S G + E++ G
Sbjct: 202 YAANVDIWSVGCIMGELVKG 221
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 56/124 (45%), Gaps = 21/124 (16%)
Query: 291 CNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVA 350
C+L + E V L +I +A A+ +LH S ++HRD+ +NI V
Sbjct: 156 CSLEDREHGVCL------HIFIQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVG 206
Query: 351 DFGTARLLHADSSNRTLLA------------GTYGYIAPELAYTMVMTEKCDVYSFGVVT 398
DFG + D +T+L GT Y++PE + + K D++S G++
Sbjct: 207 DFGLVTAMDQDEEEQTVLTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLIL 266
Query: 399 LEVL 402
E+L
Sbjct: 267 FELL 270
Score = 33.9 bits (76), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 41/73 (56%), Gaps = 9/73 (12%)
Query: 206 DFDIRYCIGTGGYGSVYKAQLPNGKV----FALKKLH-TSEELAFIKSFKNEAQVLSQVL 260
DF+ C+G GG+G V++A+ KV +A+K++ + ELA K + E + L+++
Sbjct: 7 DFEPIQCMGRGGFGVVFEAK---NKVDDCNYAIKRIRLPNRELAREKVMR-EVKALAKLE 62
Query: 261 HRNIVKLYGYCLH 273
H IV+ + L
Sbjct: 63 HPGIVRYFNAWLE 75
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 107/225 (47%), Gaps = 35/225 (15%)
Query: 206 DFDIRYC----IGTGGYGSVYKAQLPN-GKVFALKKLHTSEELAFIKSFKNEAQVLSQVL 260
D RY +G GG G V+ A + K A+KK+ ++ + +K E +++ ++
Sbjct: 8 DLGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQS-VKHALREIKIIRRLD 66
Query: 261 HRNIVKLY--------------GYCLHKKCMFLIYEYMERGSLFCNLHNN-EDAVELDWA 305
H NIVK++ G ++++ EYME +L N E L+
Sbjct: 67 HDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYME-----TDLANVLEQGPLLEEH 121
Query: 306 KRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSK-LEAFVADFGTARLLHADSSN 364
R+ + + + L Y+H S +++HRD+ N+ +N++ L + DFG AR++ S+
Sbjct: 122 ARLFMYQLL-RGLKYIH---SANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSH 177
Query: 365 RTLLAG---TYGYIAPELAYT-MVMTEKCDVYSFGVVTLEVLMGK 405
+ L+ T Y +P L + T+ D+++ G + E+L GK
Sbjct: 178 KGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGK 222
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 88/203 (43%), Gaps = 22/203 (10%)
Query: 213 IGTGGYGSV---YKAQLPNGKVFALKKLHTS-EELAFIKSFKNEAQVLSQVLHRNIVKLY 268
IG+G G V Y A L A+KKL + K E ++ V H+NI+ L
Sbjct: 26 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 83
Query: 269 GYCLHKKCM------FLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLH 322
+K + +++ E M+ C + +ELD + ++ M + +LH
Sbjct: 84 NVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQ----MELDHERMSYLLYQMLCGIKHLH 137
Query: 323 HDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYT 382
S IIHRD+ +NI++ S + DFG AR S T T Y APE+
Sbjct: 138 ---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA-GTSFMMTPYVVTRYYRAPEVILG 193
Query: 383 MVMTEKCDVYSFGVVTLEVLMGK 405
M E D++S G + E++ K
Sbjct: 194 MGYKENVDLWSVGCIMGEMVCHK 216
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 88/203 (43%), Gaps = 22/203 (10%)
Query: 213 IGTGGYG---SVYKAQLPNGKVFALKKLHTS-EELAFIKSFKNEAQVLSQVLHRNIVKLY 268
IG+G G + Y A L A+KKL + K E ++ V H+NI+ L
Sbjct: 37 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 94
Query: 269 GYCLHKKCM------FLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLH 322
+K + +++ E M+ C + +ELD + ++ M + +LH
Sbjct: 95 NVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQ----MELDHERMSYLLYQMLCGIKHLH 148
Query: 323 HDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYT 382
S IIHRD+ +NI++ S + DFG AR S T T Y APE+
Sbjct: 149 ---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA-GTSFMMTPYVVTRYYRAPEVILG 204
Query: 383 MVMTEKCDVYSFGVVTLEVLMGK 405
M E D++S G + E++ K
Sbjct: 205 MGYKENVDLWSVGCIMGEMVCHK 227
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 87/203 (42%), Gaps = 22/203 (10%)
Query: 213 IGTGGYG---SVYKAQLPNGKVFALKKLHTS-EELAFIKSFKNEAQVLSQVLHRNIVKLY 268
IG+G G + Y A L A+KKL + K E ++ V H+NI+ L
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 269 GYCLHKKCM------FLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLH 322
+K + +++ E M+ C + +ELD + ++ M + +LH
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQ----MELDHERMSYLLYQMLCGIKHLH 143
Query: 323 HDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYT 382
S IIHRD+ +NI++ S + DFG AR + Y Y APE+
Sbjct: 144 ---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRY-YRAPEVILG 199
Query: 383 MVMTEKCDVYSFGVVTLEVLMGK 405
M E D++S G + E++ K
Sbjct: 200 MGYKENVDIWSVGCIMGEMVCHK 222
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 106/247 (42%), Gaps = 47/247 (19%)
Query: 196 VYEDLIEATEDFDIRYCIGTGGYGSVY--KAQLPNG--KVFALKKLHTSEELAFIKSFKN 251
+YE + + + F I IG G + SVY AQL G + ALK L + I +
Sbjct: 12 LYEAVPQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHPIRIAA--- 68
Query: 252 EAQVLSQVLHRNIVKLYGYCLHKKCMFLI-YEYMERGSLFCNLHNNEDAVELDWAKRVNI 310
E Q L+ ++ V YC K +I Y+E S F ++ N+ E+ +N+
Sbjct: 69 ELQCLTVAGGQDNVMGVKYCFRKNDHVVIAMPYLEHES-FLDILNSLSFQEVR-EYMLNL 126
Query: 311 VKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAF-VADFGTARLLHAD-------- 361
KA+ + I+HRD+ +N L N +L+ + + DFG A+ H
Sbjct: 127 FKALKRIHQF-------GIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFV 179
Query: 362 ---------SSNRTLL-----------AGTYGYIAPE-LAYTMVMTEKCDVYSFGVVTLE 400
S N+ + AGT G+ APE L T D++S GV+ L
Sbjct: 180 QSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLS 239
Query: 401 VLMGKHP 407
+L G++P
Sbjct: 240 LLSGRYP 246
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 100/228 (43%), Gaps = 48/228 (21%)
Query: 213 IGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVL-HRNIVKLYGYC 271
+G G G+V G+ A+K++ + F E ++L++ H N+++ Y
Sbjct: 41 LGYGSSGTVVFQGSFQGRPVAVKRML----IDFCDIALMEIKLLTESDDHPNVIRYYCSE 96
Query: 272 LHKKCMFLIYEYMERGSLFCNLHNNEDAVE--------LDWAKRVN---IVKAMAHALAY 320
+ +++ E CNL N +D VE L K N +++ +A +A+
Sbjct: 97 TTDRFLYIALE-------LCNL-NLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAH 148
Query: 321 LHHDCSPSIIHRDISSNNILLNS-------------KLEAFVADFGTARLLHADS----S 363
LH S IIHRD+ NIL+++ L ++DFG + L +
Sbjct: 149 LH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRX 205
Query: 364 NRTLLAGTYGYIAPEL---AYTMVMTEKCDVYSFGVVTLEVL-MGKHP 407
N +GT G+ APEL + +T D++S G V +L GKHP
Sbjct: 206 NLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHP 253
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 100/228 (43%), Gaps = 48/228 (21%)
Query: 213 IGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVL-HRNIVKLYGYC 271
+G G G+V G+ A+K++ + F E ++L++ H N+++ Y
Sbjct: 41 LGYGSSGTVVFQGSFQGRPVAVKRML----IDFCDIALMEIKLLTESDDHPNVIRYYCSE 96
Query: 272 LHKKCMFLIYEYMERGSLFCNLHNNEDAVE--------LDWAKRVN---IVKAMAHALAY 320
+ +++ E CNL N +D VE L K N +++ +A +A+
Sbjct: 97 TTDRFLYIALE-------LCNL-NLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAH 148
Query: 321 LHHDCSPSIIHRDISSNNILLNSK-------------LEAFVADFGTARLLHADS----S 363
LH S IIHRD+ NIL+++ L ++DFG + L +
Sbjct: 149 LH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRX 205
Query: 364 NRTLLAGTYGYIAPEL---AYTMVMTEKCDVYSFGVVTLEVL-MGKHP 407
N +GT G+ APEL + +T D++S G V +L GKHP
Sbjct: 206 NLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHP 253
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 98/225 (43%), Gaps = 31/225 (13%)
Query: 196 VYEDLIEATEDFDIRYCIGTGGYG----SVYKAQLPNGKVFALK-----KLHTSEELAFI 246
++ + I+ T+ ++++ IG G Y ++KA FA+K K +EE+ +
Sbjct: 13 LHRNSIQFTDGYEVKEDIGVGSYSVCKRCIHKA---TNXEFAVKIIDKSKRDPTEEIEIL 69
Query: 247 KSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAK 306
+ H NI+ L K ++++ E + G L + + E + +
Sbjct: 70 LRYGQ---------HPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSEREASA 120
Query: 307 RVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILL---NSKLEAF-VADFGTARLLHADS 362
++ + + YLH + ++HRD+ +NIL + E+ + DFG A+ L A++
Sbjct: 121 ---VLFTITKTVEYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAEN 174
Query: 363 SNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 407
T ++APE+ CD++S GV+ L G P
Sbjct: 175 GLLXTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTP 219
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 87/203 (42%), Gaps = 22/203 (10%)
Query: 213 IGTGGYG---SVYKAQLPNGKVFALKKLHTS-EELAFIKSFKNEAQVLSQVLHRNIVKLY 268
IG+G G + Y A L A+KKL + K E ++ V H+NI+ L
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 269 GYCLHKKCM------FLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLH 322
+K + +++ E M+ C + +ELD + ++ M + +LH
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQ----MELDHERMSYLLYQMLCGIKHLH 143
Query: 323 HDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYT 382
S IIHRD+ +NI++ S + DFG AR + Y Y APE+
Sbjct: 144 ---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRY-YRAPEVILG 199
Query: 383 MVMTEKCDVYSFGVVTLEVLMGK 405
M E D++S G + E++ K
Sbjct: 200 MGYKENVDLWSVGCIMGEMVCHK 222
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 83/194 (42%), Gaps = 41/194 (21%)
Query: 228 NGKVFALKKLHTSEELAFIKSFKNEAQVLSQV-LHRN---------IVKLY-GYCLHKKC 276
NGKV + T E+ A +K ++ + +V LH IV +Y +KC
Sbjct: 31 NGKVLQIFNKRTQEKFA-LKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKC 89
Query: 277 MFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISS 336
+ ++ E ++ G LF + + D + + I+K++ A+ YLH S +I HRD+
Sbjct: 90 LLIVMECLDGGELFSRIQDRGDQAFTE-REASEIMKSIGEAIQYLH---SINIAHRDVKP 145
Query: 337 NNILLNSKLEAFV---ADFGTARLLHADSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYS 393
N+L SK + DFG A+ + +++ CD++S
Sbjct: 146 ENLLYTSKRPNAILKLTDFGFAKETTGEKYDKS----------------------CDMWS 183
Query: 394 FGVVTLEVLMGKHP 407
GV+ +L G P
Sbjct: 184 LGVIMYILLCGYPP 197
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 120/284 (42%), Gaps = 46/284 (16%)
Query: 213 IGTGGYGSVYKA-QLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVL--------HRN 263
+G+GG+GSVY ++ + A+K + + ++ N +V +V+
Sbjct: 16 LGSGGFGSVYSGIRVSDNLPVAIKHV-EKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 74
Query: 264 IVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRV--NIVKAMAHALAYL 321
+++L + LI E ME + A++ + A+ +++A+ H
Sbjct: 75 VIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC---- 130
Query: 322 HHDCSPSIIHRDISSNNILLN-SKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPE-L 379
H+C ++HRDI NIL++ ++ E + DFG+ LL + T GT Y PE +
Sbjct: 131 -HNCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRVYSPPEWI 185
Query: 380 AYTMVMTEKCDVYSFGVVTLEVLMGKHPRDIXXXXXXXXDPKIMLIDVLDQRLPPPVDRK 439
Y V+S G++ +++ G P + D +I+ V ++ +
Sbjct: 186 RYHRYHGRSAAVWSLGILLYDMVCGDIPFE--------HDEEIIRGQVFFRQRVSSECQH 237
Query: 440 VIRDILLISTVSFACLQSNPKSRPTMQSVS-----QEFLITRKT 478
+IR CL P RPT + + Q+ L+ ++T
Sbjct: 238 LIR----------WCLALRPSDRPTFEEIQNHPWMQDVLLPQET 271
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 98/218 (44%), Gaps = 25/218 (11%)
Query: 200 LIEATEDFDIRYCIGTGGYG-SVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQ 258
++ ++ +++ IG+G +G + + ++ A+K + E++A + K E
Sbjct: 14 IMHDSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIA--ANVKREIINHRS 71
Query: 259 VLHRNIVKLYGYCLHKKCMFLIYEYMERGSLF---CNLHN-NEDAVELDWAKRVNIVKAM 314
+ H NIV+ L + ++ EY G LF CN +ED + + ++ V +
Sbjct: 72 LRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGV-SY 130
Query: 315 AHALAYLHHDCSPSIIHRDISSNNILLNSKLEAF--VADFGTAR--LLHADSSNRTLLAG 370
HA+ + HRD+ N LL+ + DFG ++ +LH+ + G
Sbjct: 131 CHAM---------QVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKS---TVG 178
Query: 371 TYGYIAPELAYTMVMTEK-CDVYSFGVVTLEVLMGKHP 407
T YIAPE+ K DV+S GV +L+G +P
Sbjct: 179 TPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYP 216
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 92/227 (40%), Gaps = 43/227 (18%)
Query: 200 LIEATEDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQV 259
++ ++ +D IG+G +G V L + ++EL +K + A + V
Sbjct: 15 IMHDSDRYDFVKDIGSGNFG-----------VARLMRDKLTKELVAVKYIERGAAIDENV 63
Query: 260 L----------HRNIVKLYGYCLHKKCMFLIYEYMERGSLF---CNLHN-NEDAVELDWA 305
H NIV+ L + +I EY G L+ CN +ED
Sbjct: 64 QREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARF--- 120
Query: 306 KRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAF--VADFGTAR--LLHAD 361
+ + ++Y H S I HRD+ N LL+ + DFG ++ +LH+
Sbjct: 121 ----FFQQLLSGVSYCH---SMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQ 173
Query: 362 SSNRTLLAGTYGYIAPELAYTMVMTEK-CDVYSFGVVTLEVLMGKHP 407
+ GT YIAPE+ K DV+S GV +L+G +P
Sbjct: 174 PKS---TVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYP 217
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 103/231 (44%), Gaps = 22/231 (9%)
Query: 190 NYDGRIVYEDLIEATED-FDIRYC-IGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIK 247
+YD ++ E ED F+ C +G G YG VYKA+ +GK L E
Sbjct: 4 DYDFKVKLSSERERVEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISM 63
Query: 248 SFKNEAQVLSQVLHRNIVKLYGYCLHK--KCMFLIYEYMERGSL-FCNLHNNEDAVELDW 304
S E +L ++ H N++ L L + ++L+++Y E H A +
Sbjct: 64 SACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANK--- 120
Query: 305 AKRVNIVKAMAHALAY-----LHHDCSPSIIHRDISSNNILL----NSKLEAFVADFGTA 355
K V + + M +L Y +H+ + ++HRD+ NIL+ + +AD G A
Sbjct: 121 -KPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFA 179
Query: 356 RLLHA---DSSNRTLLAGTYGYIAPELAY-TMVMTEKCDVYSFGVVTLEVL 402
RL ++ ++ + T+ Y APEL T+ D+++ G + E+L
Sbjct: 180 RLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELL 230
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 48/115 (41%), Gaps = 25/115 (21%)
Query: 309 NIVKAMAHALAYLHHDCSPSIIHRDISSNNILL-NSKLEAF------------------V 349
++ + HAL +LH + + H D+ NIL NS+ E V
Sbjct: 127 HMAYQLCHALRFLHEN---QLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRV 183
Query: 350 ADFGTARLLHADSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMG 404
ADFG+A D + T + T Y PE+ + + CDV+S G + E G
Sbjct: 184 ADFGSATF---DHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRG 235
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 99/232 (42%), Gaps = 52/232 (22%)
Query: 213 IGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVL-HRNIVKLYGYC 271
+G G G+V G+ A+K++ + F E ++L++ H N+++ Y
Sbjct: 23 LGYGSSGTVVFQGSFQGRPVAVKRML----IDFCDIALMEIKLLTESDDHPNVIRYYCSE 78
Query: 272 LHKKCMFLIYEYMERGSLFCNLHNNEDAVE--------LDWAKRVN---IVKAMAHALAY 320
+ +++ E CNL N +D VE L K N +++ +A +A+
Sbjct: 79 TTDRFLYIALE-------LCNL-NLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAH 130
Query: 321 LHHDCSPSIIHRDISSNNILLNS-------------KLEAFVADFGTARLLHADS----S 363
LH S IIHRD+ NIL+++ L ++DFG + L +
Sbjct: 131 LH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRX 187
Query: 364 NRTLLAGTYGYIAPE-------LAYTMVMTEKCDVYSFGVVTLEVL-MGKHP 407
N +GT G+ APE L +T D++S G V +L GKHP
Sbjct: 188 NLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHP 239
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 89/215 (41%), Gaps = 23/215 (10%)
Query: 207 FDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTS----------EELAFIKSFKNEAQVL 256
+ ++ I +G YG+V G A+K++ + + K E ++L
Sbjct: 24 YTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLL 83
Query: 257 SQVLHRNIVKLYGYCLHKK-----CMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIV 311
+ H NI+ L +H + ++L+ E M R L +H+ + +I
Sbjct: 84 NHFHHPNILGLRDIFVHFEEPAMHKLYLVTELM-RTDLAQVIHDQRIVISPQ-----HIQ 137
Query: 312 KAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGT 371
M H L LH ++HRD+ NILL + + DF AR AD +N+T
Sbjct: 138 YFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTAD-ANKTHYVTH 196
Query: 372 YGYIAPELAYTMV-MTEKCDVYSFGVVTLEVLMGK 405
Y APEL T+ D++S G V E+ K
Sbjct: 197 RWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRK 231
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 89/215 (41%), Gaps = 23/215 (10%)
Query: 207 FDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTS----------EELAFIKSFKNEAQVL 256
+ ++ I +G YG+V G A+K++ + + K E ++L
Sbjct: 24 YTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLL 83
Query: 257 SQVLHRNIVKLYGYCLHKK-----CMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIV 311
+ H NI+ L +H + ++L+ E M R L +H+ + +I
Sbjct: 84 NHFHHPNILGLRDIFVHFEEPAMHKLYLVTELM-RTDLAQVIHDQRIVISPQ-----HIQ 137
Query: 312 KAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGT 371
M H L LH ++HRD+ NILL + + DF AR AD +N+T
Sbjct: 138 YFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTAD-ANKTHYVTH 196
Query: 372 YGYIAPELAYTMV-MTEKCDVYSFGVVTLEVLMGK 405
Y APEL T+ D++S G V E+ K
Sbjct: 197 RWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRK 231
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 48/115 (41%), Gaps = 25/115 (21%)
Query: 309 NIVKAMAHALAYLHHDCSPSIIHRDISSNNILL-NSKLEAF------------------V 349
++ + HAL +LH + + H D+ NIL NS+ E V
Sbjct: 136 HMAYQLCHALRFLHEN---QLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRV 192
Query: 350 ADFGTARLLHADSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMG 404
ADFG+A D + T + T Y PE+ + + CDV+S G + E G
Sbjct: 193 ADFGSATF---DHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRG 244
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 48/115 (41%), Gaps = 25/115 (21%)
Query: 309 NIVKAMAHALAYLHHDCSPSIIHRDISSNNILL-NSKLEAF------------------V 349
++ + HAL +LH + + H D+ NIL NS+ E V
Sbjct: 159 HMAYQLCHALRFLHEN---QLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRV 215
Query: 350 ADFGTARLLHADSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMG 404
ADFG+A D + T + T Y PE+ + + CDV+S G + E G
Sbjct: 216 ADFGSATF---DHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRG 267
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 97/218 (44%), Gaps = 25/218 (11%)
Query: 200 LIEATEDFDIRYCIGTGGYG-SVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQ 258
++ ++ +++ IG+G +G + + ++ A+K + E++ ++ K E
Sbjct: 14 IMHDSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKID--ENVKREIINHRS 71
Query: 259 VLHRNIVKLYGYCLHKKCMFLIYEYMERGSLF---CNLHN-NEDAVELDWAKRVNIVKAM 314
+ H NIV+ L + ++ EY G LF CN +ED + + ++ V +
Sbjct: 72 LRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGV-SY 130
Query: 315 AHALAYLHHDCSPSIIHRDISSNNILLNS----KLEAFVADFGTARLLHADSSNRTLLAG 370
HA+ + HRD+ N LL+ +L+ + + +LH+ + G
Sbjct: 131 CHAM---------QVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKD---TVG 178
Query: 371 TYGYIAPELAYTMVMTEK-CDVYSFGVVTLEVLMGKHP 407
T YIAPE+ K DV+S GV +L+G +P
Sbjct: 179 TPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYP 216
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 101/220 (45%), Gaps = 29/220 (13%)
Query: 200 LIEATEDFDIRYCIGTGGYG-SVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQ 258
++ ++ +++ IG+G +G + + ++ A+K + E++ ++ K E
Sbjct: 13 IMHDSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKID--ENVKREIINHRS 70
Query: 259 VLHRNIVKLYGYCLHKKCMFLIYEYMERGSLF---CNLHN-NEDAVELDWAKRVNIVKAM 314
+ H NIV+ L + ++ EY G LF CN +ED + + ++ V +
Sbjct: 71 LRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGV-SY 129
Query: 315 AHALAYLHHDCSPSIIHRDISSNNILLNS----KLEAFVADFGTAR--LLHADSSNRTLL 368
HA+ + HRD+ N LL+ +L+ + DFG ++ +LH+ +
Sbjct: 130 CHAM---------QVCHRDLKLENTLLDGSPAPRLK--ICDFGYSKSSVLHSQPKS---T 175
Query: 369 AGTYGYIAPELAYTMVMTEK-CDVYSFGVVTLEVLMGKHP 407
GT YIAPE+ K DV+S GV +L+G +P
Sbjct: 176 VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYP 215
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.137 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,593,758
Number of Sequences: 62578
Number of extensions: 530845
Number of successful extensions: 3894
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 834
Number of HSP's successfully gapped in prelim test: 300
Number of HSP's that attempted gapping in prelim test: 1251
Number of HSP's gapped (non-prelim): 1339
length of query: 496
length of database: 14,973,337
effective HSP length: 103
effective length of query: 393
effective length of database: 8,527,803
effective search space: 3351426579
effective search space used: 3351426579
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)