Query 011005
Match_columns 496
No_of_seqs 442 out of 4708
Neff 10.0
Searched_HMMs 46136
Date Fri Mar 29 07:01:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011005.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/011005hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00113 leucine-rich repeat r 100.0 6.1E-57 1.3E-61 500.0 35.9 455 2-478 485-954 (968)
2 KOG0581 Mitogen-activated prot 100.0 3.3E-53 7.1E-58 387.8 17.4 262 207-480 81-344 (364)
3 KOG0615 Serine/threonine prote 100.0 9.8E-53 2.1E-57 387.2 13.8 264 203-480 170-446 (475)
4 KOG1187 Serine/threonine prote 100.0 6.7E-51 1.4E-55 394.8 25.0 278 192-473 62-350 (361)
5 KOG0575 Polo-like serine/threo 100.0 6.2E-51 1.3E-55 393.9 20.7 254 205-478 18-276 (592)
6 KOG0192 Tyrosine kinase specif 100.0 2.6E-48 5.7E-53 373.8 23.8 258 206-477 42-305 (362)
7 KOG0595 Serine/threonine-prote 100.0 1E-48 2.2E-53 361.2 19.8 258 204-478 9-275 (429)
8 KOG0593 Predicted protein kina 100.0 5.8E-49 1.3E-53 348.5 15.2 265 205-475 2-288 (396)
9 KOG0591 NIMA (never in mitosis 100.0 1.2E-49 2.7E-54 349.3 9.4 260 205-474 19-284 (375)
10 KOG0598 Ribosomal protein S6 k 100.0 5.3E-48 1.1E-52 353.5 17.3 254 204-474 24-284 (357)
11 KOG0582 Ste20-like serine/thre 100.0 3.4E-46 7.4E-51 347.3 21.1 266 204-480 25-302 (516)
12 KOG0661 MAPK related serine/th 100.0 1.7E-47 3.6E-52 358.7 11.7 273 203-482 8-302 (538)
13 KOG0578 p21-activated serine/t 100.0 2.1E-46 4.6E-51 359.6 16.9 259 205-480 273-532 (550)
14 KOG0197 Tyrosine kinases [Sign 100.0 1.8E-46 3.9E-51 359.4 15.9 251 206-475 207-461 (468)
15 KOG0592 3-phosphoinositide-dep 100.0 3.3E-46 7.1E-51 355.3 16.9 254 203-476 71-343 (604)
16 KOG0659 Cdk activating kinase 100.0 8.3E-46 1.8E-50 323.0 17.9 267 205-479 2-289 (318)
17 KOG0600 Cdc2-related protein k 100.0 1E-45 2.3E-50 349.1 17.6 281 204-490 116-419 (560)
18 KOG0198 MEKK and related serin 100.0 9E-46 2E-50 345.2 16.8 260 205-479 17-284 (313)
19 KOG0583 Serine/threonine prote 100.0 5.4E-45 1.2E-49 354.3 22.5 257 203-476 15-280 (370)
20 KOG0597 Serine-threonine prote 100.0 5.9E-46 1.3E-50 354.0 14.8 262 205-485 2-265 (808)
21 KOG0605 NDR and related serine 100.0 1.2E-44 2.6E-49 345.0 18.5 255 204-475 140-449 (550)
22 KOG0201 Serine/threonine prote 100.0 9.1E-46 2E-50 344.3 10.2 257 205-478 13-270 (467)
23 KOG0588 Serine/threonine prote 100.0 1.8E-44 4E-49 350.4 17.5 260 205-483 12-275 (786)
24 KOG0616 cAMP-dependent protein 100.0 6.4E-44 1.4E-48 315.8 18.1 250 204-474 43-300 (355)
25 KOG0580 Serine/threonine prote 100.0 1.3E-44 2.8E-49 311.0 13.3 256 204-477 21-279 (281)
26 KOG0033 Ca2+/calmodulin-depend 100.0 2.5E-46 5.4E-51 322.2 2.7 270 203-487 9-283 (355)
27 KOG0193 Serine/threonine prote 100.0 3E-44 6.6E-49 346.0 15.3 265 198-477 385-655 (678)
28 KOG0611 Predicted serine/threo 100.0 3.8E-44 8.1E-49 329.1 14.6 253 204-476 52-308 (668)
29 cd05612 STKc_PRKX_like Catalyt 100.0 2.3E-43 5E-48 338.3 19.8 251 205-476 1-259 (291)
30 KOG0585 Ca2+/calmodulin-depend 100.0 1.9E-43 4.1E-48 331.0 16.4 263 203-481 95-382 (576)
31 cd05571 STKc_PKB Catalytic dom 100.0 4.2E-43 9E-48 341.5 19.3 248 211-476 1-256 (323)
32 cd07869 STKc_PFTAIRE1 Catalyti 100.0 6.6E-43 1.4E-47 337.3 20.5 269 204-478 4-295 (303)
33 cd05631 STKc_GRK4 Catalytic do 100.0 6.4E-43 1.4E-47 334.3 20.1 257 207-476 2-266 (285)
34 KOG0663 Protein kinase PITSLRE 100.0 1.3E-43 2.8E-48 318.5 14.0 280 204-489 75-379 (419)
35 KOG1026 Nerve growth factor re 100.0 1.5E-43 3.2E-48 355.7 15.8 257 205-475 486-762 (774)
36 cd05102 PTKc_VEGFR3 Catalytic 100.0 1.4E-42 3E-47 340.4 22.1 259 204-475 6-334 (338)
37 KOG0660 Mitogen-activated prot 100.0 1.5E-43 3.2E-48 323.1 14.0 279 203-489 20-328 (359)
38 KOG0694 Serine/threonine prote 100.0 5.6E-43 1.2E-47 342.6 19.0 254 203-475 366-628 (694)
39 cd06649 PKc_MEK2 Catalytic dom 100.0 1.8E-42 3.9E-47 338.2 22.7 266 204-478 4-308 (331)
40 PTZ00263 protein kinase A cata 100.0 7.6E-43 1.6E-47 340.4 18.7 251 205-476 18-276 (329)
41 cd07871 STKc_PCTAIRE3 Catalyti 100.0 5.7E-43 1.2E-47 335.2 17.3 264 205-474 5-288 (288)
42 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 1.1E-42 2.5E-47 340.1 18.5 256 205-476 1-262 (333)
43 PLN00034 mitogen-activated pro 100.0 1.5E-42 3.3E-47 341.8 19.4 258 205-480 74-337 (353)
44 PTZ00426 cAMP-dependent protei 100.0 1.3E-42 2.8E-47 339.5 18.6 252 204-476 29-289 (340)
45 cd05585 STKc_YPK1_like Catalyt 100.0 1.9E-42 4.2E-47 335.2 19.4 247 213-477 1-253 (312)
46 KOG0589 Serine/threonine prote 100.0 4.1E-43 8.8E-48 335.4 14.3 259 205-478 4-265 (426)
47 cd05595 STKc_PKB_beta Catalyti 100.0 3.2E-42 6.9E-47 335.1 20.7 248 211-476 1-256 (323)
48 cd06650 PKc_MEK1 Catalytic dom 100.0 5.4E-42 1.2E-46 334.9 22.0 266 204-478 4-306 (333)
49 cd05593 STKc_PKB_gamma Catalyt 100.0 3.7E-42 8.1E-47 335.3 20.2 248 211-476 1-256 (328)
50 cd07848 STKc_CDKL5 Catalytic d 100.0 2.1E-42 4.5E-47 331.3 17.9 264 205-474 1-287 (287)
51 cd07859 STKc_TDY_MAPK_plant Ca 100.0 3.7E-42 8E-47 337.5 19.5 274 206-486 1-305 (338)
52 KOG0032 Ca2+/calmodulin-depend 100.0 4.5E-42 9.8E-47 333.4 19.8 263 203-481 33-303 (382)
53 KOG4721 Serine/threonine prote 100.0 1.8E-43 3.9E-48 337.0 9.3 252 194-478 120-371 (904)
54 cd05573 STKc_ROCK_NDR_like Cat 100.0 2.2E-42 4.8E-47 340.7 17.3 255 205-476 1-290 (350)
55 cd05584 STKc_p70S6K Catalytic 100.0 7.4E-42 1.6E-46 332.7 20.6 248 211-476 2-261 (323)
56 KOG1095 Protein tyrosine kinas 100.0 5.6E-42 1.2E-46 356.5 20.6 255 205-474 692-960 (1025)
57 PHA03212 serine/threonine kina 100.0 1.5E-41 3.2E-46 337.5 22.4 259 205-477 92-382 (391)
58 cd05588 STKc_aPKC Catalytic do 100.0 3.6E-42 7.9E-47 335.6 17.7 255 211-476 1-267 (329)
59 cd05589 STKc_PKN Catalytic dom 100.0 1E-41 2.2E-46 332.0 20.8 251 207-476 1-262 (324)
60 KOG0599 Phosphorylase kinase g 100.0 6.6E-43 1.4E-47 305.6 11.0 259 203-477 15-289 (411)
61 PHA02988 hypothetical protein; 100.0 2.9E-41 6.3E-46 322.1 23.5 247 211-476 26-280 (283)
62 KOG0594 Protein kinase PCTAIRE 100.0 5.6E-42 1.2E-46 313.9 17.2 272 205-480 11-311 (323)
63 cd05096 PTKc_DDR1 Catalytic do 100.0 1E-41 2.2E-46 329.3 19.7 262 204-472 4-302 (304)
64 cd05590 STKc_nPKC_eta Catalyti 100.0 8.4E-42 1.8E-46 331.7 19.2 248 211-476 1-258 (320)
65 cd05618 STKc_aPKC_iota Catalyt 100.0 4.8E-42 1E-46 334.7 17.5 255 211-476 1-267 (329)
66 cd05594 STKc_PKB_alpha Catalyt 100.0 5.5E-42 1.2E-46 334.0 17.7 249 211-476 1-257 (325)
67 KOG0574 STE20-like serine/thre 100.0 9.3E-44 2E-48 314.8 4.3 258 206-480 34-292 (502)
68 cd05608 STKc_GRK1 Catalytic do 100.0 1.5E-41 3.3E-46 323.9 19.8 253 213-476 1-262 (280)
69 cd05599 STKc_NDR_like Catalyti 100.0 6.8E-42 1.5E-46 338.9 17.9 255 205-476 1-301 (364)
70 cd05626 STKc_LATS2 Catalytic d 100.0 1.5E-41 3.1E-46 338.1 20.0 255 206-476 2-310 (381)
71 cd05587 STKc_cPKC Catalytic do 100.0 2E-41 4.4E-46 329.9 20.3 253 206-476 1-262 (324)
72 KOG1989 ARK protein kinase fam 100.0 1.2E-41 2.6E-46 343.6 19.0 258 206-480 38-316 (738)
73 cd05104 PTKc_Kit Catalytic dom 100.0 3.3E-41 7.2E-46 334.3 21.8 258 204-474 34-373 (375)
74 cd07862 STKc_CDK6 Catalytic do 100.0 1.8E-41 4E-46 325.2 18.8 264 205-474 1-290 (290)
75 cd05628 STKc_NDR1 Catalytic do 100.0 3.2E-41 7E-46 333.5 21.1 256 205-476 1-298 (363)
76 cd05591 STKc_nPKC_epsilon Cata 100.0 1.9E-41 4.1E-46 329.6 19.0 248 211-476 1-259 (321)
77 KOG0194 Protein tyrosine kinas 100.0 7.2E-42 1.6E-46 333.1 15.7 262 204-480 156-425 (474)
78 cd05614 STKc_MSK2_N N-terminal 100.0 1.1E-41 2.4E-46 333.0 16.9 257 206-476 1-272 (332)
79 cd07872 STKc_PCTAIRE2 Catalyti 100.0 4E-41 8.7E-46 325.8 20.5 267 205-477 6-292 (309)
80 cd05596 STKc_ROCK Catalytic do 100.0 2.1E-41 4.5E-46 335.1 18.8 259 204-477 42-310 (370)
81 cd05592 STKc_nPKC_theta_delta 100.0 4.1E-41 8.9E-46 326.3 20.3 248 211-476 1-253 (316)
82 cd05629 STKc_NDR_like_fungal C 100.0 1.6E-41 3.6E-46 337.5 17.8 255 205-476 1-310 (377)
83 cd05106 PTKc_CSF-1R Catalytic 100.0 4.4E-41 9.6E-46 333.1 20.7 258 204-474 37-371 (374)
84 cd05575 STKc_SGK Catalytic dom 100.0 3.1E-41 6.8E-46 328.4 19.2 248 211-476 1-256 (323)
85 cd05570 STKc_PKC Catalytic dom 100.0 4.2E-41 9.1E-46 326.7 19.8 248 211-476 1-257 (318)
86 KOG1094 Discoidin domain recep 100.0 1.2E-41 2.6E-46 325.7 15.5 263 204-474 537-803 (807)
87 cd05620 STKc_nPKC_delta Cataly 100.0 4.5E-41 9.8E-46 326.0 19.7 248 211-476 1-253 (316)
88 cd05625 STKc_LATS1 Catalytic d 100.0 2.7E-41 5.9E-46 336.5 18.6 254 206-476 2-310 (382)
89 cd05621 STKc_ROCK2 Catalytic d 100.0 2.5E-41 5.5E-46 334.1 18.2 258 203-477 41-310 (370)
90 cd05617 STKc_aPKC_zeta Catalyt 100.0 6E-41 1.3E-45 326.8 20.6 255 211-476 1-265 (327)
91 KOG0196 Tyrosine kinase, EPH ( 100.0 2.6E-42 5.6E-47 340.4 10.9 272 192-479 607-895 (996)
92 cd05616 STKc_cPKC_beta Catalyt 100.0 4.8E-41 1E-45 327.1 19.8 252 206-475 1-261 (323)
93 KOG3653 Transforming growth fa 100.0 1.1E-40 2.3E-45 312.8 21.1 267 205-480 210-508 (534)
94 cd05605 STKc_GRK4_like Catalyt 100.0 4.7E-41 1E-45 321.4 19.3 258 206-476 1-266 (285)
95 cd05582 STKc_RSK_N N-terminal 100.0 1.5E-41 3.2E-46 330.1 15.8 248 211-476 2-259 (318)
96 cd06646 STKc_MAP4K5 Catalytic 100.0 6.2E-41 1.3E-45 317.6 19.5 256 204-473 8-267 (267)
97 KOG2345 Serine/threonine prote 100.0 1.9E-41 4.1E-46 292.9 14.4 260 204-473 20-298 (302)
98 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 1.1E-40 2.5E-45 319.1 21.3 264 205-480 1-271 (286)
99 cd06619 PKc_MKK5 Catalytic dom 100.0 1.4E-40 3.1E-45 317.2 21.9 258 205-477 1-259 (279)
100 cd05064 PTKc_EphR_A10 Catalyti 100.0 1.4E-40 3E-45 315.0 21.6 253 204-472 4-262 (266)
101 cd05619 STKc_nPKC_theta Cataly 100.0 7.2E-41 1.6E-45 324.5 20.0 248 211-476 1-253 (316)
102 cd05598 STKc_LATS Catalytic do 100.0 1.8E-41 3.8E-46 337.3 16.1 255 205-476 1-306 (376)
103 cd05601 STKc_CRIK Catalytic do 100.0 1.9E-41 4.1E-46 331.1 15.5 256 205-476 1-268 (330)
104 KOG0667 Dual-specificity tyros 100.0 2.9E-41 6.3E-46 330.5 16.6 262 205-476 186-507 (586)
105 KOG2052 Activin A type IB rece 100.0 4E-40 8.6E-45 306.7 23.0 264 203-477 209-505 (513)
106 KOG4717 Serine/threonine prote 100.0 4.3E-41 9.3E-46 317.4 16.5 262 205-484 18-283 (864)
107 cd05048 PTKc_Ror Catalytic Dom 100.0 3.4E-40 7.4E-45 315.3 22.8 255 205-473 5-281 (283)
108 cd07876 STKc_JNK2 Catalytic do 100.0 2.2E-40 4.7E-45 327.4 21.9 264 203-476 19-320 (359)
109 cd05615 STKc_cPKC_alpha Cataly 100.0 1.7E-40 3.6E-45 323.1 20.7 253 206-476 1-262 (323)
110 cd08529 STKc_FA2-like Catalyti 100.0 3E-40 6.5E-45 310.8 21.8 253 206-473 1-255 (256)
111 KOG0579 Ste20-like serine/thre 100.0 4E-42 8.7E-47 331.2 8.9 260 205-478 32-296 (1187)
112 cd05049 PTKc_Trk Catalytic dom 100.0 3.5E-40 7.7E-45 314.7 22.1 254 205-472 5-278 (280)
113 PTZ00267 NIMA-related protein 100.0 2.6E-40 5.7E-45 337.6 22.5 255 206-475 68-327 (478)
114 cd06654 STKc_PAK1 Catalytic do 100.0 2.3E-40 4.9E-45 318.4 20.7 268 205-489 20-288 (296)
115 PF07714 Pkinase_Tyr: Protein 100.0 6.1E-41 1.3E-45 315.9 16.4 249 209-472 3-259 (259)
116 cd05114 PTKc_Tec_Rlk Catalytic 100.0 4E-40 8.6E-45 310.1 21.9 249 205-472 4-255 (256)
117 cd06609 STKc_MST3_like Catalyt 100.0 3E-40 6.5E-45 314.1 21.2 259 205-480 1-260 (274)
118 KOG0610 Putative serine/threon 100.0 2.2E-40 4.7E-45 306.2 19.3 258 205-476 77-397 (459)
119 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 1.3E-40 2.9E-45 318.2 18.6 264 205-478 5-273 (284)
120 cd07853 STKc_NLK Catalytic dom 100.0 3.5E-40 7.6E-45 327.4 22.3 264 206-476 1-293 (372)
121 PTZ00036 glycogen synthase kin 100.0 1.2E-40 2.6E-45 336.2 19.2 264 204-477 65-357 (440)
122 PTZ00283 serine/threonine prot 100.0 1.2E-40 2.6E-45 340.2 19.0 260 203-476 30-302 (496)
123 cd05607 STKc_GRK7 Catalytic do 100.0 2.5E-40 5.4E-45 315.0 19.9 252 213-476 1-259 (277)
124 cd05604 STKc_SGK3 Catalytic do 100.0 9.7E-41 2.1E-45 325.2 17.2 248 211-476 1-256 (325)
125 cd05602 STKc_SGK1 Catalytic do 100.0 1.9E-40 4E-45 323.2 19.2 247 211-475 1-255 (325)
126 cd05603 STKc_SGK2 Catalytic do 100.0 1.9E-40 4.2E-45 322.6 19.2 247 211-475 1-255 (321)
127 PF00069 Pkinase: Protein kina 100.0 6.4E-41 1.4E-45 316.1 15.2 257 207-474 1-260 (260)
128 cd05062 PTKc_IGF-1R Catalytic 100.0 4.4E-40 9.6E-45 313.5 21.2 256 203-472 4-275 (277)
129 cd05105 PTKc_PDGFR_alpha Catal 100.0 4.5E-40 9.8E-45 327.1 22.0 258 204-474 36-396 (400)
130 cd06625 STKc_MEKK3_like Cataly 100.0 6.1E-40 1.3E-44 310.0 21.8 254 205-474 2-263 (263)
131 cd05622 STKc_ROCK1 Catalytic d 100.0 1.9E-40 4E-45 328.3 19.0 262 199-477 37-310 (371)
132 cd06645 STKc_MAP4K3 Catalytic 100.0 1.6E-40 3.4E-45 314.8 17.8 256 204-473 8-267 (267)
133 cd06637 STKc_TNIK Catalytic do 100.0 2.2E-40 4.7E-45 314.8 18.7 256 203-474 4-272 (272)
134 cd05033 PTKc_EphR Catalytic do 100.0 1E-39 2.2E-44 309.1 23.2 253 205-473 4-263 (266)
135 cd05108 PTKc_EGFR Catalytic do 100.0 6.6E-40 1.4E-44 318.3 22.3 258 205-479 7-272 (316)
136 cd06615 PKc_MEK Catalytic doma 100.0 7.2E-40 1.6E-44 316.7 22.4 264 205-477 1-293 (308)
137 cd07878 STKc_p38beta_MAPK11 Ca 100.0 3.2E-40 7E-45 324.2 20.3 268 201-479 11-306 (343)
138 cd05627 STKc_NDR2 Catalytic do 100.0 8.3E-41 1.8E-45 330.3 15.9 255 205-476 1-298 (360)
139 cd06656 STKc_PAK3 Catalytic do 100.0 3.8E-40 8.3E-45 316.9 20.0 270 204-490 18-288 (297)
140 cd05597 STKc_DMPK_like Catalyt 100.0 3E-40 6.6E-45 322.4 19.5 258 205-476 1-271 (331)
141 cd06612 STKc_MST1_2 Catalytic 100.0 5E-40 1.1E-44 309.3 20.2 253 205-474 3-256 (256)
142 cd07861 STKc_CDK1_euk Catalyti 100.0 2.4E-40 5.2E-45 316.7 18.2 265 206-474 1-285 (285)
143 cd06613 STKc_MAP4K3_like Catal 100.0 7.9E-40 1.7E-44 309.0 21.5 256 205-473 3-262 (262)
144 cd05630 STKc_GRK6 Catalytic do 100.0 3.8E-40 8.2E-45 315.1 19.5 258 206-476 1-266 (285)
145 cd05054 PTKc_VEGFR Catalytic d 100.0 8E-40 1.7E-44 319.8 22.0 259 204-475 6-333 (337)
146 cd06640 STKc_MST4 Catalytic do 100.0 1.2E-39 2.5E-44 310.6 22.3 257 205-479 4-261 (277)
147 cd05113 PTKc_Btk_Bmx Catalytic 100.0 7.8E-40 1.7E-44 308.0 20.9 250 205-472 4-255 (256)
148 PTZ00284 protein kinase; Provi 100.0 3.7E-40 8.1E-45 336.4 20.1 271 202-483 126-450 (467)
149 cd08228 STKc_Nek6 Catalytic do 100.0 1.4E-39 3.1E-44 308.3 22.7 260 205-475 2-265 (267)
150 cd05072 PTKc_Lyn Catalytic dom 100.0 8.7E-40 1.9E-44 308.6 21.1 253 204-473 5-259 (261)
151 cd05148 PTKc_Srm_Brk Catalytic 100.0 6E-40 1.3E-44 309.8 19.9 254 203-473 4-259 (261)
152 KOG0658 Glycogen synthase kina 100.0 1.5E-41 3.2E-46 310.5 8.3 262 206-477 25-312 (364)
153 cd06642 STKc_STK25-YSK1 Cataly 100.0 7.6E-40 1.6E-44 311.9 20.2 255 206-478 5-260 (277)
154 cd07873 STKc_PCTAIRE1 Catalyti 100.0 5.2E-40 1.1E-44 316.8 19.1 267 205-477 6-292 (301)
155 cd07875 STKc_JNK1 Catalytic do 100.0 1.2E-39 2.5E-44 322.8 22.1 264 203-476 22-323 (364)
156 cd06605 PKc_MAPKK Catalytic do 100.0 5.2E-40 1.1E-44 310.9 18.6 261 205-477 1-263 (265)
157 cd05090 PTKc_Ror1 Catalytic do 100.0 1.6E-39 3.5E-44 310.6 22.1 255 205-473 5-281 (283)
158 cd05632 STKc_GRK5 Catalytic do 100.0 1E-39 2.3E-44 312.1 20.6 258 207-477 2-267 (285)
159 cd06655 STKc_PAK2 Catalytic do 100.0 1E-39 2.2E-44 313.7 20.5 259 205-480 19-278 (296)
160 cd08219 STKc_Nek3 Catalytic do 100.0 1.7E-39 3.7E-44 305.6 21.5 251 206-471 1-252 (255)
161 cd06610 STKc_OSR1_SPAK Catalyt 100.0 1.3E-39 2.9E-44 308.3 20.8 259 205-474 1-267 (267)
162 cd07868 STKc_CDK8 Catalytic do 100.0 1.4E-39 3.1E-44 316.3 21.5 258 210-474 6-317 (317)
163 cd05623 STKc_MRCK_alpha Cataly 100.0 5.4E-40 1.2E-44 320.9 18.7 260 205-476 1-271 (332)
164 cd07874 STKc_JNK3 Catalytic do 100.0 8.1E-40 1.8E-44 322.9 20.1 265 203-477 15-317 (355)
165 cd05586 STKc_Sck1_like Catalyt 100.0 2.6E-40 5.5E-45 323.1 16.1 247 213-476 1-258 (330)
166 cd05624 STKc_MRCK_beta Catalyt 100.0 5.1E-40 1.1E-44 320.8 18.1 260 205-476 1-271 (331)
167 cd05068 PTKc_Frk_like Catalyti 100.0 3.4E-39 7.3E-44 304.7 23.1 253 204-473 5-259 (261)
168 cd05061 PTKc_InsR Catalytic do 100.0 3.2E-39 6.9E-44 309.3 23.0 269 203-491 4-288 (288)
169 cd06638 STKc_myosinIIIA Cataly 100.0 6.8E-40 1.5E-44 313.7 18.3 266 195-474 8-286 (286)
170 cd08223 STKc_Nek4 Catalytic do 100.0 2.3E-39 5.1E-44 305.0 21.6 254 206-474 1-257 (257)
171 cd08221 STKc_Nek9 Catalytic do 100.0 2.6E-39 5.5E-44 304.5 21.7 253 206-473 1-255 (256)
172 cd06643 STKc_SLK Catalytic dom 100.0 1.4E-39 3E-44 310.9 19.9 258 207-479 7-270 (282)
173 PHA03211 serine/threonine kina 100.0 9.7E-40 2.1E-44 328.4 19.6 260 204-476 168-460 (461)
174 cd06624 STKc_ASK Catalytic dom 100.0 1.8E-39 3.8E-44 307.8 20.2 260 202-474 5-268 (268)
175 cd05059 PTKc_Tec_like Catalyti 100.0 2.2E-39 4.8E-44 304.9 20.5 250 205-472 4-255 (256)
176 cd07863 STKc_CDK4 Catalytic do 100.0 8.9E-40 1.9E-44 313.2 18.0 263 206-474 1-288 (288)
177 cd06631 STKc_YSK4 Catalytic do 100.0 2.9E-39 6.2E-44 305.8 21.2 253 206-474 1-265 (265)
178 cd06611 STKc_SLK_like Catalyti 100.0 1.1E-39 2.5E-44 311.2 18.5 259 204-477 4-268 (280)
179 cd05032 PTKc_InsR_like Catalyt 100.0 3.2E-39 7E-44 307.5 21.6 255 204-472 5-275 (277)
180 cd06636 STKc_MAP4K4_6 Catalyti 100.0 1.8E-39 3.9E-44 310.1 19.8 263 196-474 7-282 (282)
181 cd05036 PTKc_ALK_LTK Catalytic 100.0 3.5E-39 7.5E-44 307.3 21.7 256 204-473 5-276 (277)
182 KOG0607 MAP kinase-interacting 100.0 6.9E-40 1.5E-44 292.6 15.6 273 196-480 74-370 (463)
183 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 6.7E-39 1.4E-43 303.6 23.4 260 205-475 2-265 (267)
184 cd08227 PK_STRAD_alpha Pseudok 100.0 2.6E-39 5.6E-44 315.6 21.1 265 209-477 2-313 (327)
185 cd05084 PTKc_Fes Catalytic dom 100.0 4.9E-39 1.1E-43 301.9 22.1 246 211-472 1-250 (252)
186 cd08218 STKc_Nek1 Catalytic do 100.0 2.9E-39 6.3E-44 304.1 20.6 254 206-474 1-256 (256)
187 PHA03207 serine/threonine kina 100.0 9.5E-40 2.1E-44 326.0 18.3 262 204-478 91-382 (392)
188 cd05052 PTKc_Abl Catalytic dom 100.0 5.5E-39 1.2E-43 303.5 22.5 252 205-473 6-260 (263)
189 cd05111 PTK_HER3 Pseudokinase 100.0 6.1E-39 1.3E-43 305.8 23.0 258 205-479 7-272 (279)
190 cd07847 STKc_CDKL1_4 Catalytic 100.0 1.5E-39 3.3E-44 311.2 18.8 264 205-474 1-286 (286)
191 cd05053 PTKc_FGFR Catalytic do 100.0 3.8E-39 8.3E-44 309.6 21.6 257 204-474 11-290 (293)
192 cd05055 PTKc_PDGFR Catalytic d 100.0 6.1E-39 1.3E-43 309.3 22.8 256 204-473 34-299 (302)
193 cd05574 STKc_phototropin_like 100.0 3.8E-39 8.3E-44 313.0 21.6 258 205-476 1-294 (316)
194 cd06623 PKc_MAPKK_plant_like C 100.0 4.5E-39 9.7E-44 304.2 21.2 260 205-477 1-262 (264)
195 cd06644 STKc_STK10_LOK Catalyt 100.0 5E-39 1.1E-43 308.6 21.8 261 204-479 11-277 (292)
196 cd05109 PTKc_HER2 Catalytic do 100.0 7.6E-39 1.6E-43 305.3 22.8 259 204-479 6-272 (279)
197 cd06639 STKc_myosinIIIB Cataly 100.0 2.3E-39 5E-44 310.8 19.1 265 196-474 13-290 (291)
198 cd05067 PTKc_Lck_Blk Catalytic 100.0 7.1E-39 1.5E-43 302.3 22.1 252 204-473 5-258 (260)
199 cd06658 STKc_PAK5 Catalytic do 100.0 3.7E-39 8E-44 309.2 20.4 258 206-480 23-281 (292)
200 cd05089 PTKc_Tie1 Catalytic do 100.0 6.9E-39 1.5E-43 308.4 22.4 258 205-477 2-277 (297)
201 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 3.3E-39 7.2E-44 309.0 19.9 268 205-479 1-274 (287)
202 cd07844 STKc_PCTAIRE_like Cata 100.0 2.6E-39 5.6E-44 310.5 19.2 264 205-474 5-291 (291)
203 cd08229 STKc_Nek7 Catalytic do 100.0 9E-39 1.9E-43 302.8 22.6 259 205-474 2-264 (267)
204 cd05093 PTKc_TrkB Catalytic do 100.0 9.3E-39 2E-43 306.1 22.9 258 205-477 5-281 (288)
205 cd06641 STKc_MST3 Catalytic do 100.0 1.1E-38 2.4E-43 303.9 23.2 255 205-477 4-259 (277)
206 cd05091 PTKc_Ror2 Catalytic do 100.0 4.1E-39 8.8E-44 307.9 20.2 255 205-473 5-281 (283)
207 cd05107 PTKc_PDGFR_beta Cataly 100.0 6.3E-39 1.4E-43 318.7 22.1 259 203-474 35-398 (401)
208 cd05094 PTKc_TrkC Catalytic do 100.0 9.7E-39 2.1E-43 306.5 22.7 259 205-478 5-285 (291)
209 PTZ00266 NIMA-related protein 100.0 3E-39 6.5E-44 339.9 20.8 266 203-480 11-304 (1021)
210 cd06647 STKc_PAK_I Catalytic d 100.0 8.9E-39 1.9E-43 306.8 22.3 265 204-485 18-283 (293)
211 cd06628 STKc_MAPKKK_Byr2_like 100.0 8.4E-39 1.8E-43 302.9 21.8 252 206-474 1-267 (267)
212 cd05045 PTKc_RET Catalytic dom 100.0 9.4E-39 2E-43 306.4 22.3 256 206-475 1-286 (290)
213 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 1E-38 2.2E-43 301.1 22.2 252 204-473 5-258 (260)
214 PRK13184 pknD serine/threonine 100.0 5.1E-39 1.1E-43 336.9 21.9 256 205-473 2-288 (932)
215 cd05088 PTKc_Tie2 Catalytic do 100.0 3.9E-39 8.4E-44 310.9 19.5 257 204-475 6-280 (303)
216 KOG4279 Serine/threonine prote 100.0 1E-39 2.2E-44 317.7 15.4 253 212-477 582-838 (1226)
217 cd05580 STKc_PKA Catalytic dom 100.0 7.2E-39 1.6E-43 307.2 21.2 251 205-476 1-259 (290)
218 cd05085 PTKc_Fer Catalytic dom 100.0 1.9E-38 4.1E-43 297.5 23.4 245 212-472 2-248 (250)
219 cd05071 PTKc_Src Catalytic dom 100.0 1E-38 2.2E-43 301.5 21.7 252 204-473 5-258 (262)
220 cd05097 PTKc_DDR_like Catalyti 100.0 3.7E-39 8.1E-44 310.0 18.9 260 204-473 4-294 (295)
221 cd06917 STKc_NAK1_like Catalyt 100.0 1.1E-38 2.4E-43 303.9 21.8 256 206-478 2-262 (277)
222 cd07839 STKc_CDK5 Catalytic do 100.0 2.5E-39 5.3E-44 309.5 17.3 263 206-474 1-284 (284)
223 cd05098 PTKc_FGFR1 Catalytic d 100.0 1.1E-38 2.4E-43 308.5 21.9 260 204-477 17-301 (307)
224 cd05095 PTKc_DDR2 Catalytic do 100.0 6.6E-39 1.4E-43 308.4 20.3 260 204-473 4-295 (296)
225 cd05101 PTKc_FGFR2 Catalytic d 100.0 1.7E-38 3.6E-43 306.8 23.0 259 204-476 14-297 (304)
226 cd07846 STKc_CDKL2_3 Catalytic 100.0 3.4E-39 7.5E-44 308.8 18.0 264 205-474 1-286 (286)
227 cd05043 PTK_Ryk Pseudokinase d 100.0 1.3E-38 2.9E-43 303.8 21.9 259 204-476 5-277 (280)
228 KOG0577 Serine/threonine prote 100.0 3.1E-40 6.6E-45 316.2 10.5 255 207-481 28-288 (948)
229 cd07867 STKc_CDC2L6 Catalytic 100.0 8.4E-39 1.8E-43 310.8 20.9 257 211-474 7-317 (317)
230 cd05115 PTKc_Zap-70 Catalytic 100.0 2E-38 4.3E-43 298.5 22.7 245 213-474 3-254 (257)
231 cd06651 STKc_MEKK3 Catalytic d 100.0 1.4E-38 2.9E-43 301.4 21.7 254 205-475 2-265 (266)
232 cd05103 PTKc_VEGFR2 Catalytic 100.0 1.2E-38 2.6E-43 312.7 22.0 259 204-475 6-339 (343)
233 cd05051 PTKc_DDR Catalytic dom 100.0 5.8E-39 1.3E-43 308.8 19.4 259 204-473 4-295 (296)
234 cd00192 PTKc Catalytic domain 100.0 2.3E-38 4.9E-43 298.8 22.9 248 211-472 1-261 (262)
235 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 1.9E-38 4.1E-43 303.2 22.7 258 207-474 6-280 (283)
236 cd05034 PTKc_Src_like Catalyti 100.0 1.5E-38 3.3E-43 300.1 21.7 253 204-473 5-259 (261)
237 PHA03209 serine/threonine kina 100.0 6.5E-39 1.4E-43 316.1 20.0 259 204-476 65-356 (357)
238 cd06608 STKc_myosinIII_like Ca 100.0 6E-39 1.3E-43 305.2 18.7 258 203-474 4-275 (275)
239 cd05066 PTKc_EphR_A Catalytic 100.0 1.8E-38 4E-43 300.7 21.9 253 205-473 4-264 (267)
240 cd07841 STKc_CDK7 Catalytic do 100.0 1.9E-38 4.2E-43 305.5 22.1 270 206-481 1-292 (298)
241 cd05099 PTKc_FGFR4 Catalytic d 100.0 2.7E-38 5.8E-43 306.7 23.1 262 204-479 11-297 (314)
242 cd06630 STKc_MEKK1 Catalytic d 100.0 1.7E-38 3.8E-43 300.9 21.3 256 206-474 1-267 (268)
243 KOG0983 Mitogen-activated prot 100.0 5.5E-40 1.2E-44 287.4 9.8 261 207-481 94-359 (391)
244 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 1.6E-38 3.6E-43 301.3 20.9 249 212-472 2-267 (269)
245 cd05050 PTKc_Musk Catalytic do 100.0 2.1E-38 4.5E-43 303.7 21.7 256 204-473 4-287 (288)
246 cd05069 PTKc_Yes Catalytic dom 100.0 3.3E-38 7.1E-43 297.7 22.7 251 205-473 6-258 (260)
247 cd05116 PTKc_Syk Catalytic dom 100.0 2.9E-38 6.2E-43 297.6 22.3 245 212-474 2-254 (257)
248 cd05100 PTKc_FGFR3 Catalytic d 100.0 3.7E-38 8E-43 308.4 23.6 261 205-479 12-297 (334)
249 cd05075 PTKc_Axl Catalytic dom 100.0 3.9E-38 8.5E-43 299.2 23.0 254 207-474 1-270 (272)
250 cd07870 STKc_PFTAIRE2 Catalyti 100.0 1.1E-38 2.4E-43 306.1 19.4 266 203-474 3-291 (291)
251 cd07860 STKc_CDK2_3 Catalytic 100.0 7.3E-39 1.6E-43 306.3 17.7 257 206-474 1-284 (284)
252 cd06626 STKc_MEKK4 Catalytic d 100.0 2.6E-38 5.6E-43 299.0 21.3 255 206-474 1-264 (264)
253 cd08217 STKc_Nek2 Catalytic do 100.0 2.5E-38 5.5E-43 299.1 21.2 258 206-474 1-265 (265)
254 cd05035 PTKc_Axl_like Catalyti 100.0 4.4E-38 9.6E-43 299.0 22.7 254 207-474 1-271 (273)
255 cd06617 PKc_MKK3_6 Catalytic d 100.0 2E-38 4.4E-43 303.0 20.4 260 205-478 1-268 (283)
256 cd05039 PTKc_Csk_like Catalyti 100.0 5.6E-38 1.2E-42 295.4 23.0 249 204-473 5-254 (256)
257 KOG0604 MAP kinase-activated p 100.0 2.4E-39 5.2E-44 286.9 12.6 269 203-486 59-337 (400)
258 cd06648 STKc_PAK_II Catalytic 100.0 3E-38 6.4E-43 302.0 21.2 258 206-480 20-278 (285)
259 cd07836 STKc_Pho85 Catalytic d 100.0 1.5E-38 3.3E-43 304.0 19.2 265 206-474 1-284 (284)
260 cd06659 STKc_PAK6 Catalytic do 100.0 1.4E-38 3.1E-43 306.0 19.1 253 209-478 25-278 (297)
261 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 1.8E-38 3.9E-43 303.5 19.7 261 206-474 5-282 (284)
262 cd05063 PTKc_EphR_A2 Catalytic 100.0 5.3E-38 1.1E-42 297.7 22.7 254 204-473 4-265 (268)
263 cd06614 STKc_PAK Catalytic dom 100.0 3.3E-38 7.1E-43 302.1 21.3 261 203-479 17-278 (286)
264 cd06652 STKc_MEKK2 Catalytic d 100.0 3.4E-38 7.3E-43 298.5 21.2 253 205-474 2-264 (265)
265 cd05092 PTKc_TrkA Catalytic do 100.0 4.5E-38 9.8E-43 300.1 21.9 253 205-472 5-278 (280)
266 cd06632 STKc_MEKK1_plant Catal 100.0 3.6E-38 7.7E-43 297.0 20.9 251 206-474 1-258 (258)
267 cd06616 PKc_MKK4 Catalytic dom 100.0 1.1E-38 2.4E-43 305.7 17.6 262 206-478 5-274 (288)
268 cd08220 STKc_Nek8 Catalytic do 100.0 4.4E-38 9.5E-43 296.0 21.4 253 206-474 1-256 (256)
269 cd05060 PTKc_Syk_like Catalyti 100.0 7.5E-38 1.6E-42 294.7 22.6 246 211-474 1-254 (257)
270 cd06629 STKc_MAPKKK_Bck1_like 100.0 2.4E-38 5.3E-43 300.7 19.4 256 206-474 2-272 (272)
271 cd05578 STKc_Yank1 Catalytic d 100.0 1.2E-38 2.6E-43 300.3 17.1 252 206-474 1-258 (258)
272 cd05046 PTK_CCK4 Pseudokinase 100.0 5.9E-38 1.3E-42 298.5 22.0 256 205-473 5-274 (275)
273 cd05040 PTKc_Ack_like Catalyti 100.0 4.2E-38 9.2E-43 296.4 20.7 247 211-472 1-255 (257)
274 cd05112 PTKc_Itk Catalytic dom 100.0 5.4E-38 1.2E-42 295.5 21.4 250 205-472 4-255 (256)
275 cd05047 PTKc_Tie Catalytic dom 100.0 3.7E-38 8E-43 299.1 20.1 247 212-473 2-266 (270)
276 cd05609 STKc_MAST Catalytic do 100.0 4.2E-38 9.1E-43 304.1 20.8 257 205-476 1-278 (305)
277 cd07832 STKc_CCRK Catalytic do 100.0 2E-38 4.4E-43 303.4 18.4 263 206-474 1-285 (286)
278 cd05073 PTKc_Hck Catalytic dom 100.0 1E-37 2.2E-42 294.3 22.9 252 204-473 5-258 (260)
279 cd05065 PTKc_EphR_B Catalytic 100.0 6.6E-38 1.4E-42 297.2 21.6 251 205-473 4-266 (269)
280 cd05572 STKc_cGK_PKG Catalytic 100.0 4.6E-38 9.9E-43 297.1 20.5 249 213-476 1-257 (262)
281 cd05042 PTKc_Aatyk Catalytic d 100.0 4.2E-38 9.2E-43 298.5 20.1 248 212-472 2-267 (269)
282 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 5.1E-38 1.1E-42 300.4 20.8 261 205-474 4-282 (284)
283 cd05082 PTKc_Csk Catalytic dom 100.0 9.9E-38 2.1E-42 293.7 22.4 247 205-473 6-254 (256)
284 cd08225 STKc_Nek5 Catalytic do 100.0 4.1E-38 8.8E-43 296.5 19.6 254 206-474 1-257 (257)
285 cd07833 STKc_CDKL Catalytic do 100.0 3.3E-38 7.2E-43 302.3 19.3 264 205-474 1-288 (288)
286 KOG0596 Dual specificity; seri 100.0 5.1E-39 1.1E-43 306.4 13.1 255 205-476 361-632 (677)
287 KOG4257 Focal adhesion tyrosin 100.0 6.9E-39 1.5E-43 308.7 14.1 253 205-474 389-648 (974)
288 cd07849 STKc_ERK1_2_like Catal 100.0 3E-38 6.4E-43 309.3 18.9 268 204-480 4-301 (336)
289 cd05577 STKc_GRK Catalytic dom 100.0 4.5E-38 9.9E-43 299.6 19.5 251 213-476 1-259 (277)
290 cd07845 STKc_CDK10 Catalytic d 100.0 6.4E-38 1.4E-42 303.4 20.7 272 204-481 6-300 (309)
291 cd05057 PTKc_EGFR_like Catalyt 100.0 1.8E-37 4E-42 295.8 23.4 258 205-479 7-272 (279)
292 cd07843 STKc_CDC2L1 Catalytic 100.0 3.5E-38 7.6E-43 303.0 18.5 264 205-474 5-293 (293)
293 KOG0584 Serine/threonine prote 100.0 3.5E-39 7.5E-44 313.1 11.5 253 210-479 45-304 (632)
294 smart00219 TyrKc Tyrosine kina 100.0 1.4E-37 3.1E-42 292.8 22.3 250 207-471 1-257 (258)
295 cd05041 PTKc_Fes_like Catalyti 100.0 1.4E-37 3.1E-42 291.7 22.2 246 211-472 1-249 (251)
296 cd05058 PTKc_Met_Ron Catalytic 100.0 1.4E-37 3E-42 293.7 21.9 249 211-475 1-259 (262)
297 cd06607 STKc_TAO Catalytic dom 100.0 1.4E-37 3.1E-42 300.7 22.4 256 205-480 15-276 (307)
298 cd05056 PTKc_FAK Catalytic dom 100.0 2.2E-37 4.8E-42 293.7 23.2 255 204-476 5-266 (270)
299 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 1.4E-37 3.1E-42 293.6 21.7 239 211-472 1-261 (262)
300 cd06618 PKc_MKK7 Catalytic dom 100.0 8.5E-38 1.8E-42 300.7 20.5 265 204-482 14-284 (296)
301 cd06657 STKc_PAK4 Catalytic do 100.0 8E-38 1.7E-42 299.9 20.2 255 210-481 25-280 (292)
302 cd07835 STKc_CDK1_like Catalyt 100.0 3.7E-38 8.1E-43 301.2 17.7 263 207-474 1-283 (283)
303 KOG0199 ACK and related non-re 100.0 9.2E-39 2E-43 311.5 13.6 270 206-493 111-390 (1039)
304 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 1.6E-37 3.4E-42 292.8 21.3 237 211-472 1-258 (259)
305 cd05110 PTKc_HER4 Catalytic do 100.0 1.5E-37 3.3E-42 299.9 21.5 258 204-478 6-271 (303)
306 cd05122 PKc_STE Catalytic doma 100.0 1.5E-37 3.2E-42 291.4 20.7 252 206-473 1-253 (253)
307 cd07850 STKc_JNK Catalytic dom 100.0 1.9E-37 4.1E-42 305.6 22.4 264 203-476 14-316 (353)
308 cd07837 STKc_CdkB_plant Cataly 100.0 5.2E-38 1.1E-42 302.1 17.7 266 205-474 1-294 (295)
309 cd08528 STKc_Nek10 Catalytic d 100.0 2E-37 4.4E-42 293.9 21.5 254 206-472 1-267 (269)
310 KOG1025 Epidermal growth facto 100.0 1.9E-38 4.1E-43 314.3 14.4 255 207-480 698-962 (1177)
311 cd05044 PTKc_c-ros Catalytic d 100.0 9.9E-38 2.2E-42 295.9 18.8 248 212-473 2-268 (269)
312 cd07855 STKc_ERK5 Catalytic do 100.0 7.7E-38 1.7E-42 306.1 18.6 272 204-482 4-305 (334)
313 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 2.4E-37 5.3E-42 293.9 21.3 238 212-472 2-273 (274)
314 PLN00009 cyclin-dependent kina 100.0 1.2E-37 2.7E-42 299.3 19.4 268 205-477 2-290 (294)
315 KOG0586 Serine/threonine prote 100.0 3.4E-38 7.3E-43 305.9 15.5 256 204-480 55-315 (596)
316 KOG0986 G protein-coupled rece 100.0 1E-38 2.2E-43 297.5 11.0 260 204-476 184-451 (591)
317 cd06606 STKc_MAPKKK Catalytic 100.0 2.9E-37 6.2E-42 290.7 21.1 254 206-474 1-260 (260)
318 cd08215 STKc_Nek Catalytic dom 100.0 2.3E-37 5E-42 291.2 20.4 255 206-474 1-258 (258)
319 cd05579 STKc_MAST_like Catalyt 100.0 1.5E-37 3.4E-42 293.7 18.9 248 213-476 1-262 (265)
320 cd05086 PTKc_Aatyk2 Catalytic 100.0 2.8E-37 6.1E-42 292.7 20.7 249 212-473 2-267 (268)
321 cd07842 STKc_CDK8_like Catalyt 100.0 2.4E-37 5.2E-42 300.5 20.5 265 206-474 1-316 (316)
322 cd07834 STKc_MAPK Catalytic do 100.0 1.5E-37 3.1E-42 303.9 18.8 268 206-480 1-298 (330)
323 cd05083 PTKc_Chk Catalytic dom 100.0 3.8E-37 8.2E-42 289.4 20.8 245 205-472 6-251 (254)
324 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 2.3E-37 5E-42 295.8 19.6 262 205-474 4-282 (284)
325 cd07858 STKc_TEY_MAPK_plant Ca 100.0 1.4E-37 3.1E-42 304.5 18.6 268 204-478 4-298 (337)
326 KOG4278 Protein tyrosine kinas 100.0 3E-38 6.5E-43 304.0 13.4 263 198-477 260-525 (1157)
327 cd05633 STKc_GRK3 Catalytic do 100.0 2.8E-37 6E-42 294.3 20.0 249 212-477 1-261 (279)
328 PHA03390 pk1 serine/threonine- 100.0 3.3E-37 7.1E-42 291.8 20.2 254 198-475 7-266 (267)
329 cd07831 STKc_MOK Catalytic dom 100.0 1.9E-37 4.2E-42 296.0 18.8 260 207-474 1-282 (282)
330 KOG1035 eIF-2alpha kinase GCN2 100.0 2.6E-38 5.7E-43 326.1 13.6 258 203-475 477-875 (1351)
331 KOG0666 Cyclin C-dependent kin 100.0 3.6E-38 7.8E-43 280.7 12.6 272 203-478 22-344 (438)
332 cd05581 STKc_PDK1 Catalytic do 100.0 2.4E-37 5.2E-42 295.0 19.0 252 205-474 1-280 (280)
333 cd08216 PK_STRAD Pseudokinase 100.0 4.9E-37 1.1E-41 298.0 21.2 257 210-478 7-302 (314)
334 cd06653 STKc_MEKK3_like_1 Cata 100.0 6.8E-37 1.5E-41 289.4 21.6 252 205-473 2-263 (264)
335 cd08226 PK_STRAD_beta Pseudoki 100.0 6.4E-37 1.4E-41 298.8 22.0 258 212-480 5-317 (328)
336 cd06635 STKc_TAO1 Catalytic do 100.0 7.1E-37 1.5E-41 297.0 22.2 256 206-481 26-287 (317)
337 cd08530 STKc_CNK2-like Catalyt 100.0 3.8E-37 8.3E-42 289.6 19.7 252 206-473 1-255 (256)
338 cd05611 STKc_Rim15_like Cataly 100.0 5.1E-37 1.1E-41 289.6 20.4 249 211-477 2-257 (260)
339 PHA03210 serine/threonine kina 100.0 1.2E-37 2.6E-42 319.1 17.2 266 203-477 146-460 (501)
340 cd05118 STKc_CMGC Catalytic do 100.0 5.1E-37 1.1E-41 293.3 20.3 262 207-474 1-283 (283)
341 cd06627 STKc_Cdc7_like Catalyt 100.0 8E-37 1.7E-41 287.0 21.2 252 206-474 1-254 (254)
342 cd07865 STKc_CDK9 Catalytic do 100.0 5.3E-37 1.1E-41 297.2 19.4 265 204-474 11-310 (310)
343 cd07838 STKc_CDK4_6_like Catal 100.0 1.1E-36 2.4E-41 291.5 21.3 262 207-474 1-287 (287)
344 cd07877 STKc_p38alpha_MAPK14 C 100.0 7.5E-37 1.6E-41 300.2 20.5 275 197-482 9-311 (345)
345 KOG0690 Serine/threonine prote 100.0 1.5E-37 3.2E-42 278.3 13.7 252 204-475 167-428 (516)
346 cd08222 STKc_Nek11 Catalytic d 100.0 3.3E-37 7.2E-42 290.8 16.9 254 206-474 1-260 (260)
347 cd07830 STKc_MAK_like Catalyti 100.0 1.6E-36 3.5E-41 289.9 21.8 262 207-474 1-283 (283)
348 cd07879 STKc_p38delta_MAPK13 C 100.0 6.2E-37 1.3E-41 300.5 18.9 271 204-486 14-312 (342)
349 cd07852 STKc_MAPK15 Catalytic 100.0 1.6E-36 3.5E-41 297.3 21.6 267 203-477 5-301 (337)
350 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 5.5E-37 1.2E-41 298.9 17.9 273 201-484 6-301 (328)
351 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 7.9E-37 1.7E-41 287.9 18.3 239 211-472 1-257 (258)
352 cd07840 STKc_CDK9_like Catalyt 100.0 9.3E-37 2E-41 292.0 19.1 262 207-474 1-287 (287)
353 KOG0612 Rho-associated, coiled 100.0 4.8E-38 1E-42 321.7 10.5 261 199-476 69-343 (1317)
354 cd06634 STKc_TAO2 Catalytic do 100.0 2.1E-36 4.5E-41 292.6 21.3 256 205-480 15-276 (308)
355 KOG0587 Traf2- and Nck-interac 100.0 5.3E-37 1.2E-41 307.2 17.5 259 203-476 17-287 (953)
356 cd05606 STKc_beta_ARK Catalyti 100.0 2.6E-36 5.6E-41 287.6 21.6 249 212-477 1-261 (278)
357 PTZ00024 cyclin-dependent prot 100.0 7E-37 1.5E-41 299.6 17.6 266 204-480 7-322 (335)
358 cd05123 STKc_AGC Catalytic dom 100.0 1.9E-36 4.1E-41 283.8 19.8 244 213-474 1-250 (250)
359 cd06633 STKc_TAO3 Catalytic do 100.0 2.1E-36 4.5E-41 293.1 20.6 256 207-482 23-284 (313)
360 cd07864 STKc_CDK12 Catalytic d 100.0 9.3E-37 2E-41 294.4 18.0 263 202-474 4-302 (302)
361 cd05613 STKc_MSK1_N N-terminal 100.0 1.3E-36 2.8E-41 291.6 18.5 258 206-477 1-274 (290)
362 cd07829 STKc_CDK_like Catalyti 100.0 8.7E-37 1.9E-41 291.5 17.1 262 207-474 1-282 (282)
363 KOG4250 TANK binding protein k 100.0 2.5E-37 5.3E-42 303.9 13.0 203 207-413 15-229 (732)
364 cd07880 STKc_p38gamma_MAPK12 C 100.0 1.7E-36 3.6E-41 297.5 18.9 268 202-480 12-307 (343)
365 cd05074 PTKc_Tyro3 Catalytic d 100.0 5.6E-36 1.2E-40 284.6 21.9 253 207-474 1-271 (273)
366 cd07866 STKc_BUR1 Catalytic do 100.0 1E-36 2.2E-41 295.4 15.5 265 204-474 7-311 (311)
367 KOG4645 MAPKKK (MAP kinase kin 100.0 4E-38 8.7E-43 326.3 5.8 261 204-480 1234-1503(1509)
368 cd07851 STKc_p38 Catalytic dom 100.0 2.3E-36 5E-41 296.6 17.6 269 203-482 13-309 (343)
369 KOG0603 Ribosomal protein S6 k 100.0 6.2E-37 1.3E-41 298.7 13.2 244 203-474 320-566 (612)
370 cd05583 STKc_MSK_N N-terminal 100.0 2.7E-36 5.9E-41 289.1 17.5 257 206-476 1-271 (288)
371 cd07854 STKc_MAPK4_6 Catalytic 100.0 2.1E-36 4.5E-41 296.8 17.0 265 204-477 4-306 (342)
372 KOG1006 Mitogen-activated prot 100.0 2.8E-38 6E-43 275.7 3.0 262 210-481 69-337 (361)
373 KOG4236 Serine/threonine prote 100.0 1.1E-37 2.3E-42 295.1 6.9 266 204-485 561-833 (888)
374 KOG0671 LAMMER dual specificit 100.0 2.3E-37 5.1E-42 283.4 8.9 267 203-479 87-414 (415)
375 KOG0662 Cyclin-dependent kinas 100.0 1.1E-36 2.4E-41 250.8 11.6 266 206-477 3-289 (292)
376 cd05610 STKc_MASTL Catalytic d 100.0 9.1E-36 2E-40 314.4 21.3 146 205-356 4-152 (669)
377 PHA02882 putative serine/threo 100.0 6.8E-36 1.5E-40 286.9 18.4 256 204-472 11-293 (294)
378 KOG1151 Tousled-like protein k 100.0 2.7E-37 5.8E-42 287.0 7.0 264 203-476 461-746 (775)
379 cd07857 STKc_MPK1 Catalytic do 100.0 1.3E-35 2.9E-40 290.1 19.2 265 206-477 1-298 (332)
380 KOG0669 Cyclin T-dependent kin 100.0 4.2E-37 9.1E-42 266.3 4.2 268 205-478 17-322 (376)
381 KOG0200 Fibroblast/platelet-de 100.0 8.6E-35 1.9E-39 302.4 21.4 260 203-475 294-579 (609)
382 cd05576 STKc_RPK118_like Catal 100.0 6.6E-35 1.4E-39 271.1 17.2 228 216-474 4-237 (237)
383 KOG0696 Serine/threonine prote 100.0 1.7E-35 3.7E-40 272.8 10.4 254 205-476 349-611 (683)
384 PLN03225 Serine/threonine-prot 100.0 1.9E-34 4.1E-39 297.0 15.6 270 203-480 130-459 (566)
385 PLN03224 probable serine/threo 100.0 1.3E-33 2.8E-38 283.5 19.4 268 204-477 144-506 (507)
386 smart00220 S_TKc Serine/Threon 100.0 2.6E-33 5.5E-38 260.9 19.4 243 217-474 1-244 (244)
387 KOG0695 Serine/threonine prote 100.0 1.1E-33 2.5E-38 254.4 13.8 261 204-475 249-520 (593)
388 KOG0614 cGMP-dependent protein 100.0 1.3E-34 2.8E-39 273.4 7.7 255 205-476 420-682 (732)
389 KOG1024 Receptor-like protein 100.0 2E-33 4.4E-38 257.6 15.3 261 198-473 277-553 (563)
390 KOG1027 Serine/threonine prote 100.0 1.8E-34 3.8E-39 287.8 6.4 243 210-477 514-773 (903)
391 KOG0608 Warts/lats-like serine 100.0 3.8E-33 8.2E-38 269.6 13.9 201 205-411 629-874 (1034)
392 KOG1290 Serine/threonine prote 100.0 2.1E-32 4.6E-37 257.7 16.8 131 205-341 78-221 (590)
393 KOG0670 U4/U6-associated splic 100.0 3.2E-33 7E-38 264.6 10.5 266 201-476 428-751 (752)
394 KOG0984 Mitogen-activated prot 100.0 4.7E-33 1E-37 234.5 9.2 200 206-409 47-253 (282)
395 KOG0665 Jun-N-terminal kinase 100.0 2E-33 4.4E-38 251.8 7.5 260 205-475 17-314 (369)
396 KOG0668 Casein kinase II, alph 100.0 5.2E-33 1.1E-37 237.7 6.5 263 204-480 37-331 (338)
397 KOG0664 Nemo-like MAPK-related 100.0 3E-33 6.4E-38 245.1 4.8 262 206-474 54-346 (449)
398 KOG1152 Signal transduction se 100.0 1.1E-31 2.3E-36 257.4 9.1 198 204-409 560-770 (772)
399 cd00180 PKc Catalytic domain o 100.0 5.7E-30 1.2E-34 232.8 19.8 212 213-472 1-215 (215)
400 KOG0576 Mitogen-activated prot 100.0 4E-32 8.7E-37 264.4 4.7 259 204-477 14-277 (829)
401 KOG1345 Serine/threonine kinas 100.0 1.5E-30 3.2E-35 228.1 9.7 265 203-483 22-299 (378)
402 KOG1167 Serine/threonine prote 100.0 2.8E-30 6.2E-35 240.2 9.3 267 199-477 30-387 (418)
403 smart00221 STYKc Protein kinas 100.0 4.1E-28 9E-33 223.2 19.7 198 207-409 1-201 (225)
404 PLN00181 protein SPA1-RELATED; 100.0 9.4E-29 2E-33 267.6 10.1 201 258-477 28-271 (793)
405 smart00750 KIND kinase non-cat 99.9 6.3E-27 1.4E-31 207.0 14.4 167 287-477 1-171 (176)
406 KOG1163 Casein kinase (serine/ 99.9 1.6E-25 3.6E-30 193.3 11.0 257 204-473 14-282 (341)
407 KOG0590 Checkpoint kinase and 99.9 4E-26 8.7E-31 234.5 8.1 260 209-478 322-592 (601)
408 KOG1165 Casein kinase (serine/ 99.9 1.4E-24 3E-29 196.0 16.0 254 204-470 27-294 (449)
409 KOG1164 Casein kinase (serine/ 99.9 2.4E-24 5.1E-29 208.7 18.2 260 206-478 19-300 (322)
410 PRK09188 serine/threonine prot 99.9 9.7E-25 2.1E-29 210.5 15.1 164 203-383 16-195 (365)
411 KOG0195 Integrin-linked kinase 99.9 9.7E-26 2.1E-30 198.0 6.3 248 207-472 192-443 (448)
412 COG0515 SPS1 Serine/threonine 99.9 2.1E-22 4.5E-27 196.5 20.8 262 207-477 2-281 (384)
413 KOG1240 Protein kinase contain 99.9 2.5E-24 5.4E-29 221.1 5.0 246 206-471 24-291 (1431)
414 PRK10359 lipopolysaccharide co 99.9 1.3E-22 2.9E-27 181.8 12.0 190 185-402 9-216 (232)
415 cd05147 RIO1_euk RIO kinase fa 99.9 3.3E-22 7.1E-27 177.6 12.2 140 210-358 2-167 (190)
416 cd05145 RIO1_like RIO kinase f 99.9 6.4E-21 1.4E-25 170.1 15.4 141 210-359 2-168 (190)
417 PF14531 Kinase-like: Kinase-l 99.8 4.5E-21 9.7E-26 177.2 10.6 233 207-462 14-288 (288)
418 PRK12274 serine/threonine prot 99.8 2.6E-20 5.6E-25 163.3 12.9 184 208-409 5-208 (218)
419 KOG0603 Ribosomal protein S6 k 99.8 5.7E-22 1.2E-26 194.4 2.6 234 213-474 2-246 (612)
420 KOG4158 BRPK/PTEN-induced prot 99.8 1.5E-20 3.3E-25 173.8 11.3 246 205-468 157-507 (598)
421 KOG1023 Natriuretic peptide re 99.8 2.1E-20 4.6E-25 183.5 11.3 214 257-478 2-227 (484)
422 KOG1166 Mitotic checkpoint ser 99.8 6.1E-20 1.3E-24 192.5 10.7 195 203-407 696-902 (974)
423 KOG1033 eIF-2alpha kinase PEK/ 99.8 5.5E-20 1.2E-24 177.1 5.6 178 276-473 330-514 (516)
424 smart00090 RIO RIO-like kinase 99.8 1.3E-18 2.8E-23 159.9 13.8 142 206-358 29-198 (237)
425 PRK10345 hypothetical protein; 99.8 1.6E-18 3.5E-23 155.3 13.3 135 209-355 6-157 (210)
426 PRK14879 serine/threonine prot 99.8 7.3E-18 1.6E-22 153.5 13.4 135 211-357 2-143 (211)
427 cd05144 RIO2_C RIO kinase fami 99.8 9.1E-18 2E-22 151.1 13.3 144 200-359 10-176 (198)
428 KOG0606 Microtubule-associated 99.7 1.2E-18 2.5E-23 179.6 6.1 219 204-475 82-319 (1205)
429 TIGR03724 arch_bud32 Kae1-asso 99.7 1.4E-17 3E-22 150.2 12.3 131 212-357 1-138 (199)
430 PRK09605 bifunctional UGMP fam 99.7 3.2E-17 6.9E-22 169.7 16.3 139 204-358 332-477 (535)
431 PLN03150 hypothetical protein; 99.7 4.9E-17 1.1E-21 170.0 9.6 152 16-169 419-571 (623)
432 cd05119 RIO RIO kinase family, 99.7 5.9E-16 1.3E-20 138.1 12.4 138 210-360 2-166 (187)
433 cd05120 APH_ChoK_like Aminogly 99.7 9.6E-16 2.1E-20 131.6 13.0 135 209-357 2-138 (155)
434 KOG0590 Checkpoint kinase and 99.6 3.1E-17 6.7E-22 169.1 0.9 258 205-476 20-291 (601)
435 PRK01723 3-deoxy-D-manno-octul 99.6 3.9E-15 8.4E-20 137.2 13.2 137 210-358 36-192 (239)
436 KOG0617 Ras suppressor protein 99.6 4E-16 8.7E-21 128.6 -0.1 114 2-118 43-157 (264)
437 TIGR01982 UbiB 2-polyprenylphe 99.5 8.4E-14 1.8E-18 139.4 13.1 141 210-359 122-308 (437)
438 KOG1266 Protein kinase [Signal 99.5 1.5E-13 3.3E-18 125.0 8.6 205 256-475 121-335 (458)
439 KOG0601 Cyclin-dependent kinas 99.5 8.1E-14 1.8E-18 137.4 6.6 253 205-477 114-385 (524)
440 PRK04750 ubiB putative ubiquin 99.4 2.7E-13 5.8E-18 137.2 9.9 145 203-360 118-316 (537)
441 KOG1243 Protein kinase [Genera 99.4 2.8E-12 6E-17 127.9 16.2 168 225-405 33-200 (690)
442 KOG0617 Ras suppressor protein 99.4 1E-14 2.2E-19 120.4 -1.9 115 1-118 65-180 (264)
443 PLN00113 leucine-rich repeat r 99.4 3.9E-13 8.4E-18 150.2 9.4 113 13-126 473-585 (968)
444 cd05146 RIO3_euk RIO kinase fa 99.4 7E-12 1.5E-16 110.3 13.8 138 210-359 2-175 (197)
445 cd05151 ChoK Choline Kinase (C 99.4 2.9E-12 6.2E-17 112.3 10.4 127 211-357 4-136 (170)
446 KOG0601 Cyclin-dependent kinas 99.3 1.6E-12 3.5E-17 128.3 5.1 250 203-476 263-519 (524)
447 PLN03150 hypothetical protein; 99.3 9.1E-12 2E-16 130.6 10.0 95 6-100 433-528 (623)
448 KOG0472 Leucine-rich repeat pr 99.3 4.1E-13 9E-18 125.1 -1.5 115 2-123 193-308 (565)
449 COG3642 Mn2+-dependent serine/ 99.2 1.3E-10 2.7E-15 98.7 12.5 131 212-357 3-140 (204)
450 cd05154 ACAD10_11_like Acyl-Co 99.2 6.5E-11 1.4E-15 108.6 11.9 143 211-357 4-206 (223)
451 KOG3087 Serine/threonine prote 99.2 3.5E-10 7.7E-15 95.4 13.8 144 209-357 11-165 (229)
452 KOG0606 Microtubule-associated 99.2 4.7E-12 1E-16 131.6 2.4 249 203-466 802-1084(1205)
453 COG4248 Uncharacterized protei 99.2 2.1E-09 4.5E-14 101.8 17.3 258 208-475 14-300 (637)
454 KOG0444 Cytoskeletal regulator 99.1 3.5E-12 7.5E-17 125.2 -1.5 112 2-116 232-344 (1255)
455 KOG0472 Leucine-rich repeat pr 99.1 1.6E-11 3.4E-16 114.7 1.3 120 2-125 422-541 (565)
456 KOG4194 Membrane glycoprotein 99.1 6.7E-12 1.4E-16 122.4 -1.3 120 1-120 278-401 (873)
457 PF14580 LRR_9: Leucine-rich r 99.1 6.5E-11 1.4E-15 102.1 4.2 114 4-124 9-125 (175)
458 KOG4237 Extracellular matrix p 99.1 6.8E-12 1.5E-16 116.9 -2.5 126 1-127 76-203 (498)
459 PF01163 RIO1: RIO1 family; I 99.1 2.2E-09 4.7E-14 94.3 12.9 127 220-359 1-157 (188)
460 PF13855 LRR_8: Leucine rich r 99.1 5.6E-11 1.2E-15 84.4 2.1 61 15-75 1-61 (61)
461 KOG0444 Cytoskeletal regulator 99.1 1.7E-11 3.7E-16 120.5 -0.9 113 4-119 211-324 (1255)
462 KOG4194 Membrane glycoprotein 99.1 3.9E-11 8.4E-16 117.2 1.5 115 2-116 207-322 (873)
463 PRK15123 lipopolysaccharide co 99.0 5E-09 1.1E-13 97.7 14.8 140 213-357 30-194 (268)
464 COG0478 RIO-like serine/threon 99.0 2.6E-09 5.7E-14 96.2 11.7 137 207-358 93-252 (304)
465 PF14580 LRR_9: Leucine-rich r 99.0 1.2E-10 2.5E-15 100.6 2.7 98 1-102 28-128 (175)
466 PF13855 LRR_8: Leucine rich r 99.0 1.2E-10 2.6E-15 82.7 1.5 61 39-99 1-61 (61)
467 KOG3741 Poly(A) ribonuclease s 98.9 3.3E-08 7.2E-13 96.2 15.9 170 217-407 288-475 (655)
468 KOG0532 Leucine-rich repeat (L 98.9 1.8E-10 3.8E-15 112.4 -0.2 116 2-123 108-245 (722)
469 KOG2137 Protein kinase [Signal 98.9 7E-10 1.5E-14 111.4 2.1 155 312-476 106-270 (700)
470 KOG4237 Extracellular matrix p 98.8 4E-10 8.7E-15 105.3 -0.3 122 4-127 58-181 (498)
471 KOG0532 Leucine-rich repeat (L 98.8 2.6E-10 5.7E-15 111.2 -1.7 110 2-116 153-262 (722)
472 KOG0618 Serine/threonine phosp 98.8 4.7E-10 1E-14 115.4 -2.4 87 11-100 379-465 (1081)
473 KOG4579 Leucine-rich repeat (L 98.7 7.4E-10 1.6E-14 88.5 -1.9 113 10-127 48-161 (177)
474 KOG0618 Serine/threonine phosp 98.7 1.5E-09 3.3E-14 111.7 -0.2 111 1-115 392-504 (1081)
475 PF06293 Kdo: Lipopolysacchari 98.7 1.2E-07 2.5E-12 85.6 10.5 106 247-358 56-171 (206)
476 COG0661 AarF Predicted unusual 98.6 1.6E-07 3.4E-12 95.0 10.6 143 211-360 131-317 (517)
477 PRK15387 E3 ubiquitin-protein 98.6 5E-08 1.1E-12 102.9 7.0 35 88-124 423-457 (788)
478 PRK09902 hypothetical protein; 98.6 6.5E-07 1.4E-11 79.1 12.8 139 213-357 26-179 (216)
479 COG1718 RIO1 Serine/threonine 98.6 1.5E-06 3.2E-11 78.0 15.0 155 194-359 34-217 (268)
480 PRK15387 E3 ubiquitin-protein 98.6 1.6E-08 3.5E-13 106.6 3.2 88 16-112 383-470 (788)
481 KOG1259 Nischarin, modulator o 98.6 3.9E-09 8.4E-14 95.4 -1.6 84 13-100 282-365 (490)
482 KOG1259 Nischarin, modulator o 98.6 7E-09 1.5E-13 93.8 -0.2 117 1-123 293-410 (490)
483 PRK15370 E3 ubiquitin-protein 98.6 6.1E-08 1.3E-12 102.7 6.2 88 2-100 209-296 (754)
484 PF06176 WaaY: Lipopolysacchar 98.5 1.7E-06 3.7E-11 76.7 12.4 153 188-356 12-182 (229)
485 TIGR02172 Fb_sc_TIGR02172 Fibr 98.5 2.3E-06 4.9E-11 78.2 13.7 137 211-356 7-181 (226)
486 PRK15370 E3 ubiquitin-protein 98.5 1.2E-07 2.7E-12 100.5 5.9 89 1-100 229-317 (754)
487 PLN03210 Resistant to P. syrin 98.5 2.5E-07 5.3E-12 104.6 8.6 110 2-115 599-708 (1153)
488 COG4886 Leucine-rich repeat (L 98.5 5.6E-08 1.2E-12 97.3 2.3 94 2-98 126-220 (394)
489 PLN03210 Resistant to P. syrin 98.5 3.9E-07 8.4E-12 103.0 8.5 108 1-110 620-727 (1153)
490 KOG1235 Predicted unusual prot 98.4 2.3E-06 4.9E-11 86.4 12.2 139 210-359 166-356 (538)
491 PF01636 APH: Phosphotransfera 98.4 5.6E-06 1.2E-10 76.3 13.6 142 211-356 3-196 (239)
492 PF12799 LRR_4: Leucine Rich r 98.3 3.5E-07 7.5E-12 59.4 2.5 36 40-76 2-37 (44)
493 KOG1859 Leucine-rich repeat pr 98.3 1.5E-08 3.2E-13 101.9 -6.0 122 1-129 173-296 (1096)
494 COG4886 Leucine-rich repeat (L 98.3 2.6E-07 5.6E-12 92.6 2.5 112 1-116 149-260 (394)
495 KOG0576 Mitogen-activated prot 98.3 4.8E-07 1E-11 90.5 3.8 254 211-492 248-504 (829)
496 PF12799 LRR_4: Leucine Rich r 98.3 5.9E-07 1.3E-11 58.3 2.7 37 15-52 1-37 (44)
497 PLN02876 acyl-CoA dehydrogenas 98.2 1.7E-05 3.8E-10 86.6 14.0 80 210-289 43-131 (822)
498 cd05150 APH Aminoglycoside 3'- 98.2 1.6E-05 3.4E-10 74.0 11.9 139 213-356 6-192 (244)
499 PF12260 PIP49_C: Protein-kina 98.2 6.6E-06 1.4E-10 72.6 8.8 105 250-358 7-112 (188)
500 KOG4579 Leucine-rich repeat (L 98.2 1.9E-07 4E-12 75.0 -0.9 104 1-107 62-166 (177)
No 1
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=6.1e-57 Score=500.04 Aligned_cols=455 Identities=29% Similarity=0.484 Sum_probs=296.8
Q ss_pred Cccc-cCChhccCCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCCCC
Q 011005 2 YKIG-IIPPEIGNLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGSIP 80 (496)
Q Consensus 2 n~~~-~lp~~~~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~ 80 (496)
|++. .+|..+.++++|+.|+|++|++.+.+|+.+..+++|++|+|++|.+++.+|..+..+++|+.|+|++|++++.+|
T Consensus 485 n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 564 (968)
T PLN00113 485 NQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIP 564 (968)
T ss_pred CccCCccChhhhhhhccCEEECcCCcceeeCChHHcCccCCCEEECCCCcccccCChhHhCcccCCEEECCCCcccccCC
Confidence 3443 355566666677777777777766666666667777777777777776666677777777777777777766666
Q ss_pred ccccCcccccccccccccCCCCCCCCCCCCCccccccccCCCCCCCCCC--CCCCCCCCCCCCcc-chhhhhhHHHHHHH
Q 011005 81 GEITKLSRLDYLNLSSNKLSGPVPFSNNDLSSMHTVVSLSPNNGLCGNI--LDLPSCDTTKPATL-FVEIFLPLTIVLSV 157 (496)
Q Consensus 81 ~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~l~~~~~~~~n~~~c~~~--~~~~~~~~~~~~~~-~~~i~~~~~~~~~~ 157 (496)
..+..+++|+.|++++|++++.+|.. ..+..+. -..+.+|+..|+.. ...++|........ ++.+++++++++++
T Consensus 565 ~~l~~l~~L~~l~ls~N~l~~~~p~~-~~~~~~~-~~~~~~n~~lc~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~ 642 (968)
T PLN00113 565 KNLGNVESLVQVNISHNHLHGSLPST-GAFLAIN-ASAVAGNIDLCGGDTTSGLPPCKRVRKTPSWWFYITCTLGAFLVL 642 (968)
T ss_pred hhHhcCcccCEEeccCCcceeeCCCc-chhcccC-hhhhcCCccccCCccccCCCCCccccccceeeeehhHHHHHHHHH
Confidence 66666777777777777776666643 1122221 13456777788753 23455643211111 12222222222222
Q ss_pred HHHHHHHHhHhhccChhhHHhhcCCCc-ceeeec--CCccccHHHHHHHHhCCCCcceeeecCCeeEEEEEe-CCCcEEE
Q 011005 158 IVFACLLLAKRKYKKPKLEERATNNID-VFSIWN--YDGRIVYEDLIEATEDFDIRYCIGTGGYGSVYKAQL-PNGKVFA 233 (496)
Q Consensus 158 i~~~~~~~~~r~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~va 233 (496)
++++++++++|+++..+.......... ....+. ....+.++++ ...|...+.||+|+||.||+|.. .++..||
T Consensus 643 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~va 719 (968)
T PLN00113 643 ALVAFGFVFIRGRNNLELKRVENEDGTWELQFFDSKVSKSITINDI---LSSLKEENVISRGKKGASYKGKSIKNGMQFV 719 (968)
T ss_pred HHHHHHHHHHHhhhcccccccccccccccccccccccchhhhHHHH---HhhCCcccEEccCCCeeEEEEEECCCCcEEE
Confidence 222222222222211111000000000 000000 0112333343 45678888999999999999976 5789999
Q ss_pred EEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHH
Q 011005 234 LKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKA 313 (496)
Q Consensus 234 vK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ 313 (496)
||++...... ...|++.+++++|||||++++++.+.+..++||||+++|+|.++++ .++|..+.+++.|
T Consensus 720 vK~~~~~~~~-----~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~------~l~~~~~~~i~~~ 788 (968)
T PLN00113 720 VKEINDVNSI-----PSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVLR------NLSWERRRKIAIG 788 (968)
T ss_pred EEEccCCccc-----cHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCCCCCcHHHHHh------cCCHHHHHHHHHH
Confidence 9998754321 2346888999999999999999999999999999999999999996 3789999999999
Q ss_pred HHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCCCccccccccccccccccccCCcCcccchhh
Q 011005 314 MAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYS 393 (496)
Q Consensus 314 i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws 393 (496)
+++|++|||..+..+|+||||||+||+++.++..++. ||........ ....+++.|+|||++.+..++.++||||
T Consensus 789 ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~~----~~~~~t~~y~aPE~~~~~~~~~~sDv~S 863 (968)
T PLN00113 789 IAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCTD----TKCFISSAYVAPETRETKDITEKSDIYG 863 (968)
T ss_pred HHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-eccccccccC----CCccccccccCcccccCCCCCcccchhh
Confidence 9999999997667799999999999999999888775 6655433211 2236789999999999999999999999
Q ss_pred HHHHHHHHHhCCCCCccccccCCCCC-------CcchhHhhhcCCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHH
Q 011005 394 FGVVTLEVLMGKHPRDILSSLSSSSD-------PKIMLIDVLDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQ 466 (496)
Q Consensus 394 lG~il~el~~g~~p~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ 466 (496)
|||++|||+||+.||+.......... .........+..+..... ........+.+++.+||+.||++|||++
T Consensus 864 ~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~Cl~~~P~~RPt~~ 942 (968)
T PLN00113 864 FGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDVS-VNQNEIVEVMNLALHCTATDPTARPCAN 942 (968)
T ss_pred HHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCCCC-ccHHHHHHHHHHHHhhCcCCchhCcCHH
Confidence 99999999999999853221100000 000111122222222111 1223455678999999999999999999
Q ss_pred HHHHHHHHhccC
Q 011005 467 SVSQEFLITRKT 478 (496)
Q Consensus 467 evl~~~~~~~~~ 478 (496)
|+++.+....+.
T Consensus 943 evl~~L~~~~~~ 954 (968)
T PLN00113 943 DVLKTLESASRS 954 (968)
T ss_pred HHHHHHHHhhcc
Confidence 999998776553
No 2
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=3.3e-53 Score=387.77 Aligned_cols=262 Identities=27% Similarity=0.400 Sum_probs=219.3
Q ss_pred CCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCC-eEEEEEEec
Q 011005 207 FDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKK-CMFLIYEYM 284 (496)
Q Consensus 207 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-~~~lV~e~~ 284 (496)
.+..+.||+|..|+|||+.++ +++.+|+|.+....+....+++.+|++++++.+||+||.+||.|..+. ...++||||
T Consensus 81 le~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mEYM 160 (364)
T KOG0581|consen 81 LERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICMEYM 160 (364)
T ss_pred hhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehhhc
Confidence 444667999999999999775 688999999977667777889999999999999999999999999988 599999999
Q ss_pred CCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCCC
Q 011005 285 ERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSN 364 (496)
Q Consensus 285 ~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 364 (496)
++|||...+...+ .+++....+|+.+|++||.|||+ .++|+||||||+|+|++..|+|||||||.+..+... .
T Consensus 161 DgGSLd~~~k~~g---~i~E~~L~~ia~~VL~GL~YLh~--~~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS--~ 233 (364)
T KOG0581|consen 161 DGGSLDDILKRVG---RIPEPVLGKIARAVLRGLSYLHE--ERKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNS--I 233 (364)
T ss_pred CCCCHHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHhh--ccCeeeccCCHHHeeeccCCCEEeccccccHHhhhh--h
Confidence 9999999998763 78999999999999999999996 479999999999999999999999999999887554 4
Q ss_pred ccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHHHHH
Q 011005 365 RTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVIRDI 444 (496)
Q Consensus 365 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (496)
..+.+||..|||||.+.+..|+.++||||||+.++|+.+|+.|+..... ...........++....+..... ...
T Consensus 234 a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~--~~~~~~~Ll~~Iv~~ppP~lP~~---~fS 308 (364)
T KOG0581|consen 234 ANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNP--PYLDIFELLCAIVDEPPPRLPEG---EFS 308 (364)
T ss_pred cccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCC--CCCCHHHHHHHHhcCCCCCCCcc---cCC
Confidence 5678999999999999999999999999999999999999999864310 01111122223333222222211 234
Q ss_pred HHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCCC
Q 011005 445 LLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTPL 480 (496)
Q Consensus 445 ~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~~ 480 (496)
.++..|+..||++||.+|||++|+++|+|+++....
T Consensus 309 ~ef~~FV~~CL~Kdp~~R~s~~qLl~Hpfi~~~~~~ 344 (364)
T KOG0581|consen 309 PEFRSFVSCCLRKDPSERPSAKQLLQHPFIKKFEDP 344 (364)
T ss_pred HHHHHHHHHHhcCCcccCCCHHHHhcCHHHhhcccc
Confidence 458899999999999999999999999999877554
No 3
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=9.8e-53 Score=387.22 Aligned_cols=264 Identities=26% Similarity=0.344 Sum_probs=217.9
Q ss_pred HHhCCCCcceeeecCCeeEEEEE-eCCCcEEEEEEcccchhHH------HHHHHHHHHHHHHhhcccccccccceeecCC
Q 011005 203 ATEDFDIRYCIGTGGYGSVYKAQ-LPNGKVFALKKLHTSEELA------FIKSFKNEAQVLSQVLHRNIVKLYGYCLHKK 275 (496)
Q Consensus 203 ~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~------~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~ 275 (496)
..+.|.+.+.||+|+||.|-+|. .++|+.||||++++..... -...+.+|+++|++++|||||+++++|...+
T Consensus 170 ~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~d 249 (475)
T KOG0615|consen 170 FNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPD 249 (475)
T ss_pred hcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCC
Confidence 45678889999999999999994 5689999999998753211 2234579999999999999999999999999
Q ss_pred eEEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCC---CCeEEccc
Q 011005 276 CMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSK---LEAFVADF 352 (496)
Q Consensus 276 ~~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~---~~~kl~Df 352 (496)
..||||||++||.|.+.+-.+. .+.+.....+++|++.|+.||| +.||+||||||+|||++.+ ..+||+||
T Consensus 250 s~YmVlE~v~GGeLfd~vv~nk---~l~ed~~K~~f~Qll~avkYLH---~~GI~HRDiKPeNILl~~~~e~~llKItDF 323 (475)
T KOG0615|consen 250 SSYMVLEYVEGGELFDKVVANK---YLREDLGKLLFKQLLTAVKYLH---SQGIIHRDIKPENILLSNDAEDCLLKITDF 323 (475)
T ss_pred ceEEEEEEecCccHHHHHHhcc---ccccchhHHHHHHHHHHHHHHH---HcCcccccCCcceEEeccCCcceEEEeccc
Confidence 9999999999999999998765 5677777889999999999999 8899999999999999776 77999999
Q ss_pred cccccccCCCCCccccccccccccccccccCCcC---cccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhc
Q 011005 353 GTARLLHADSSNRTLLAGTYGYIAPELAYTMVMT---EKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLD 429 (496)
Q Consensus 353 g~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~---~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 429 (496)
|+|+... ......+.||||.|.|||++.+..++ .++|+||+||+||-+++|.+||.... .......++..
T Consensus 324 GlAK~~g-~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~------~~~sl~eQI~~ 396 (475)
T KOG0615|consen 324 GLAKVSG-EGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEY------TDPSLKEQILK 396 (475)
T ss_pred chhhccc-cceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCccccc------CCccHHHHHhc
Confidence 9999876 34445678999999999999877543 37899999999999999999997322 11223444444
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCCC
Q 011005 430 QRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTPL 480 (496)
Q Consensus 430 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~~ 480 (496)
.+... ....+.....+..+||.+||..||++|||++|+|+|+|+......
T Consensus 397 G~y~f-~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~hpW~~~~~~~ 446 (475)
T KOG0615|consen 397 GRYAF-GPLQWDRISEEALDLINWMLVVDPENRPSADEALNHPWFKDAPCL 446 (475)
T ss_pred Ccccc-cChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcChhhhccccc
Confidence 44443 223355555667899999999999999999999999999866533
No 4
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.7e-51 Score=394.85 Aligned_cols=278 Identities=40% Similarity=0.679 Sum_probs=231.6
Q ss_pred CccccHHHHHHHHhCCCCcceeeecCCeeEEEEEeCCCcEEEEEEcccchhHHHHHHHHHHHHHHHhhccccccccccee
Q 011005 192 DGRIVYEDLIEATEDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYC 271 (496)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~ 271 (496)
...++++++..+|++|...+.||+|+||.||+|..++|+.||||++....... .++|.+|+.++.+++|||+|+++|||
T Consensus 62 ~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~-~~eF~~Ei~~ls~l~H~Nlv~LlGyC 140 (361)
T KOG1187|consen 62 LRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQG-EREFLNEVEILSRLRHPNLVKLLGYC 140 (361)
T ss_pred cceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcc-hhHHHHHHHHHhcCCCcCcccEEEEE
Confidence 45688999999999999999999999999999999999999999887755432 46699999999999999999999999
Q ss_pred ecCC-eEEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEc
Q 011005 272 LHKK-CMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVA 350 (496)
Q Consensus 272 ~~~~-~~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~ 350 (496)
.+.+ +.+||+|||++|+|.++++..... .++|..+++|+.++|+||+|||+.+...|+||||||+|||+|+++++||+
T Consensus 141 ~e~~~~~~LVYEym~nGsL~d~L~~~~~~-~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKls 219 (361)
T KOG1187|consen 141 LEGGEHRLLVYEYMPNGSLEDHLHGKKGE-PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLS 219 (361)
T ss_pred ecCCceEEEEEEccCCCCHHHHhCCCCCC-CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEcc
Confidence 9998 599999999999999999986654 78999999999999999999999877789999999999999999999999
Q ss_pred cccccccccCCCCCcccc-ccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCC--------CCc
Q 011005 351 DFGTARLLHADSSNRTLL-AGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSS--------DPK 421 (496)
Q Consensus 351 Dfg~~~~~~~~~~~~~~~-~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~--------~~~ 421 (496)
|||+|+............ .||.+|+|||+...+..+.++||||||+++.|++||+.|.+......... ...
T Consensus 220 DFGLa~~~~~~~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~~ 299 (361)
T KOG1187|consen 220 DFGLAKLGPEGDTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLEE 299 (361)
T ss_pred CccCcccCCccccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHHC
Confidence 999996654311111222 79999999999999999999999999999999999998876432111100 011
Q ss_pred chhHhhhcCCCC-CCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHH
Q 011005 422 IMLIDVLDQRLP-PPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFL 473 (496)
Q Consensus 422 ~~~~~~~~~~~~-~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~ 473 (496)
....++++.++. ..... ......+..++.+|++.+|.+||+|.||++.+.
T Consensus 300 ~~~~eiiD~~l~~~~~~~--~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~ 350 (361)
T KOG1187|consen 300 GKLREIVDPRLKEGEYPD--EKEVKKLAELALRCLRPDPKERPTMSQVVKELE 350 (361)
T ss_pred cchhheeCCCccCCCCCh--HHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHH
Confidence 134556666654 22221 145666889999999999999999999988883
No 5
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=6.2e-51 Score=393.93 Aligned_cols=254 Identities=26% Similarity=0.427 Sum_probs=221.1
Q ss_pred hCCCCcceeeecCCeeEEEEEe-CCCcEEEEEEcccch--hHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEE
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIY 281 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~ 281 (496)
.+|...+.||+|||+.+|.++. ..|+.||+|++.+.. .....+.+.+|+++.+.++|||||+++++|++.+.+|||.
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL 97 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL 97 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence 5699999999999999999976 789999999997742 2334577899999999999999999999999999999999
Q ss_pred EecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCC
Q 011005 282 EYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHAD 361 (496)
Q Consensus 282 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 361 (496)
|+|..++|..+++... .+++.+++.+.+||+.||.||| +.+|+|||||..|+|++++.++||+|||+|..+..+
T Consensus 98 ELC~~~sL~el~Krrk---~ltEpEary~l~QIv~GlkYLH---~~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~ 171 (592)
T KOG0575|consen 98 ELCHRGSLMELLKRRK---PLTEPEARYFLRQIVEGLKYLH---SLGIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYD 171 (592)
T ss_pred EecCCccHHHHHHhcC---CCCcHHHHHHHHHHHHHHHHHH---hcCceecccchhheeecCcCcEEecccceeeeecCc
Confidence 9999999999998544 7999999999999999999999 789999999999999999999999999999999888
Q ss_pred CCCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhh--cCCCCCCCChh
Q 011005 362 SSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVL--DQRLPPPVDRK 439 (496)
Q Consensus 362 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 439 (496)
.....+.||||.|.|||++.....+..+||||+||++|.|+.|++||+.. ........+. +..+|...+
T Consensus 172 ~Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk-------~vkety~~Ik~~~Y~~P~~ls-- 242 (592)
T KOG0575|consen 172 GERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETK-------TVKETYNKIKLNEYSMPSHLS-- 242 (592)
T ss_pred ccccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccc-------hHHHHHHHHHhcCcccccccC--
Confidence 78888899999999999999999999999999999999999999999732 1222233222 233333222
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccC
Q 011005 440 VIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKT 478 (496)
Q Consensus 440 ~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~ 478 (496)
....+||.++|++||.+|||+++|+.|.|+.+..
T Consensus 243 -----~~A~dLI~~lL~~~P~~Rpsl~~vL~h~Ff~~g~ 276 (592)
T KOG0575|consen 243 -----AEAKDLIRKLLRPNPSERPSLDEVLDHPFFKSGF 276 (592)
T ss_pred -----HHHHHHHHHHhcCCcccCCCHHHHhcCHhhhCCC
Confidence 2456899999999999999999999999994443
No 6
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=2.6e-48 Score=373.76 Aligned_cols=258 Identities=33% Similarity=0.533 Sum_probs=211.1
Q ss_pred CCCCcceeeecCCeeEEEEEeCCCcEEEEEEcccch-hHHHHHHHHHHHHHHHhhcccccccccceeecCC-eEEEEEEe
Q 011005 206 DFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSE-ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKK-CMFLIYEY 283 (496)
Q Consensus 206 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-~~~lV~e~ 283 (496)
++.+.+.+|+|+||+||+|.+.+...||||++.... +....+.|.+|+.++++++|||||+++|++.++. ..++||||
T Consensus 42 ~l~~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy 121 (362)
T KOG0192|consen 42 ELPIEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEY 121 (362)
T ss_pred HhhhhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEe
Confidence 344555699999999999999655559999998754 2222678999999999999999999999999987 79999999
Q ss_pred cCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCC-eEEeCCCCCceEecCCC-CeEEccccccccccCC
Q 011005 284 MERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPS-IIHRDISSNNILLNSKL-EAFVADFGTARLLHAD 361 (496)
Q Consensus 284 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~-i~H~dlkp~Nil~~~~~-~~kl~Dfg~~~~~~~~ 361 (496)
+++|+|.++++.. ....+++..++.++.||++|+.||| +.+ ||||||||+|||++.++ ++||+|||+++.....
T Consensus 122 ~~~GsL~~~l~~~-~~~~l~~~~~l~~aldiArGm~YLH---~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~ 197 (362)
T KOG0192|consen 122 MPGGSLSVLLHKK-RKRKLPLKVRLRIALDIARGMEYLH---SEGPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVIS 197 (362)
T ss_pred CCCCcHHHHHhhc-ccCCCCHHHHHHHHHHHHHHHHHHh---cCCCeeecccChhhEEEcCCCCEEEECCCccceeeccc
Confidence 9999999999875 3448999999999999999999999 667 99999999999999997 9999999999877543
Q ss_pred CCCccccccccccccccccc--cCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChh
Q 011005 362 SSNRTLLAGTYGYIAPELAY--TMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRK 439 (496)
Q Consensus 362 ~~~~~~~~gt~~y~aPE~~~--~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 439 (496)
....+...||+.|||||++. ...|+.++||||||+++|||+||+.||..... ......+......+.....
T Consensus 198 ~~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~-------~~~~~~v~~~~~Rp~~p~~ 270 (362)
T KOG0192|consen 198 KTSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAP-------VQVASAVVVGGLRPPIPKE 270 (362)
T ss_pred cccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCH-------HHHHHHHHhcCCCCCCCcc
Confidence 33344468999999999999 56999999999999999999999999974432 2222333323232222221
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhcc
Q 011005 440 VIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRK 477 (496)
Q Consensus 440 ~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~ 477 (496)
....+..++.+||..||++||++.+++..+.....
T Consensus 271 ---~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~ 305 (362)
T KOG0192|consen 271 ---CPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMS 305 (362)
T ss_pred ---CCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHH
Confidence 33357788899999999999999999998876554
No 7
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=1e-48 Score=361.22 Aligned_cols=258 Identities=27% Similarity=0.442 Sum_probs=210.7
Q ss_pred HhCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccch-hHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEE
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSE-ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIY 281 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~ 281 (496)
..+|...+.||.|+||+||+|+++ ++..||||.+.... .....+.+..|+++++.++|||||.+++++..++..|+||
T Consensus 9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVM 88 (429)
T KOG0595|consen 9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVM 88 (429)
T ss_pred cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEE
Confidence 467889999999999999999765 68999999998764 4455677899999999999999999999999999999999
Q ss_pred EecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCC------CCeEEcccccc
Q 011005 282 EYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSK------LEAFVADFGTA 355 (496)
Q Consensus 282 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~------~~~kl~Dfg~~ 355 (496)
|||+||+|.++++..+ .+++..++.++.|++.||++|| +++|+||||||+|||++.. -.+||+|||+|
T Consensus 89 EyC~gGDLs~yi~~~~---~l~e~t~r~Fm~QLA~alq~L~---~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfA 162 (429)
T KOG0595|consen 89 EYCNGGDLSDYIRRRG---RLPEATARHFMQQLASALQFLH---ENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFA 162 (429)
T ss_pred EeCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCCcceEEeccCCCCCCCceEEecccchh
Confidence 9999999999999876 7899999999999999999999 8899999999999999865 46899999999
Q ss_pred ccccCCCCCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHh-hhcCCCCC
Q 011005 356 RLLHADSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLID-VLDQRLPP 434 (496)
Q Consensus 356 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 434 (496)
+.+.. .....+.+|+|.|||||++....|+.|+|+||+|+++|++++|+.||+.... .+.... ..+....+
T Consensus 163 R~L~~-~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~-------~eL~~~~~k~~~~~~ 234 (429)
T KOG0595|consen 163 RFLQP-GSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETP-------KELLLYIKKGNEIVP 234 (429)
T ss_pred hhCCc-hhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCH-------HHHHHHHhccccccC
Confidence 98863 4456678999999999999999999999999999999999999999973221 111110 01111111
Q ss_pred CCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccC
Q 011005 435 PVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKT 478 (496)
Q Consensus 435 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~ 478 (496)
.... .......+++...++.+|.+|-++.+-..+.+.....
T Consensus 235 ~~~~---~~s~~~~~Ll~~ll~~~~~~~~~~~~~~~~~~l~~~p 275 (429)
T KOG0595|consen 235 VLPA---ELSNPLRELLISLLQRNPKDRISFEDFFDHPFLAANP 275 (429)
T ss_pred chhh---hccCchhhhhhHHHhcCccccCchHHhhhhhhcccCc
Confidence 1111 1111233666678888888999888888888776665
No 8
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=5.8e-49 Score=348.46 Aligned_cols=265 Identities=26% Similarity=0.350 Sum_probs=213.0
Q ss_pred hCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchh-HHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEE
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEE-LAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYE 282 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e 282 (496)
+.|+...++|+|+||+|||++.+ +|+.||||++..+.+ ....+-..+|++++++++|+|+|.++++|..+..+++|+|
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE 81 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFE 81 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEee
Confidence 45778889999999999999876 599999999988764 4455667999999999999999999999999999999999
Q ss_pred ecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCC
Q 011005 283 YMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADS 362 (496)
Q Consensus 283 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 362 (496)
||+. ++.+-+..... ..+...+.++++|++.|+.|+| +++++||||||+|||++.+|.+||||||+|+.+..++
T Consensus 82 ~~dh-TvL~eLe~~p~--G~~~~~vk~~l~Q~l~ai~~cH---k~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pg 155 (396)
T KOG0593|consen 82 YCDH-TVLHELERYPN--GVPSELVKKYLYQLLKAIHFCH---KNNCIHRDIKPENILITQNGVVKLCDFGFARTLSAPG 155 (396)
T ss_pred ecch-HHHHHHHhccC--CCCHHHHHHHHHHHHHHhhhhh---hcCeecccCChhheEEecCCcEEeccchhhHhhcCCc
Confidence 9987 55555655443 5788899999999999999999 8899999999999999999999999999999998778
Q ss_pred CCcccccccccccccccccc-CCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCC-------CcchhHhhhc-----
Q 011005 363 SNRTLLAGTYGYIAPELAYT-MVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSD-------PKIMLIDVLD----- 429 (496)
Q Consensus 363 ~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~-------~~~~~~~~~~----- 429 (496)
...+..+.|.+|+|||.+.+ ..|...+||||+||++.||++|.+-|...++.+.-.. -...-..++.
T Consensus 156 d~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F 235 (396)
T KOG0593|consen 156 DNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFF 235 (396)
T ss_pred chhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCce
Confidence 88888999999999999988 6899999999999999999999999864433210000 0000000000
Q ss_pred --CCCCCCCC-----hhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHh
Q 011005 430 --QRLPPPVD-----RKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLIT 475 (496)
Q Consensus 430 --~~~~~~~~-----~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~ 475 (496)
-++|.+.. .........+.+++.+||..||++|++-+|++.|.++.
T Consensus 236 ~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H~yFd 288 (396)
T KOG0593|consen 236 HGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLHHPYFD 288 (396)
T ss_pred eeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhcChHHH
Confidence 01221111 11111222478999999999999999999999999884
No 9
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.2e-49 Score=349.28 Aligned_cols=260 Identities=24% Similarity=0.336 Sum_probs=210.3
Q ss_pred hCCCCcceeeecCCeeEEEEE-eCCCcEEEEEEcccch-hHHHHHHHHHHHHHHHhhcccccccccc-eeecCCe-EEEE
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQ-LPNGKVFALKKLHTSE-ELAFIKSFKNEAQVLSQVLHRNIVKLYG-YCLHKKC-MFLI 280 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~-~~~~~~~-~~lV 280 (496)
.+|++.++||+|.||+|||+. ..+|..+|.|.++-.. +....+....|+.++++++|||||++++ .+.+++. ++||
T Consensus 19 ~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlniv 98 (375)
T KOG0591|consen 19 ADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIV 98 (375)
T ss_pred HHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHH
Confidence 458889999999999999994 5689999999998543 3455677899999999999999999998 4555444 8999
Q ss_pred EEecCCCChhhhhhCC-CCCccCCHHHHHHHHHHHHHHHHHHHhCCCC-CeEEeCCCCCceEecCCCCeEEccccccccc
Q 011005 281 YEYMERGSLFCNLHNN-EDAVELDWAKRVNIVKAMAHALAYLHHDCSP-SIIHRDISSNNILLNSKLEAFVADFGTARLL 358 (496)
Q Consensus 281 ~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~-~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 358 (496)
||+|.+|+|..+++.. .....+++..+++++.|++.||.++|+...+ -|+||||||.|||++.+|.+||+|||+++.+
T Consensus 99 mE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l 178 (375)
T KOG0591|consen 99 MELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFL 178 (375)
T ss_pred HHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhHh
Confidence 9999999999998753 2334699999999999999999999964322 3899999999999999999999999999999
Q ss_pred cCCCCCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCCh
Q 011005 359 HADSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDR 438 (496)
Q Consensus 359 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (496)
..........+|||.||+||.+.+..|+.+|||||+||++|||+.-++||..- .-......+.....++-++.
T Consensus 179 ~s~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~-------n~~~L~~KI~qgd~~~~p~~ 251 (375)
T KOG0591|consen 179 SSKTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGD-------NLLSLCKKIEQGDYPPLPDE 251 (375)
T ss_pred cchhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccc-------cHHHHHHHHHcCCCCCCcHH
Confidence 77766677789999999999999999999999999999999999999999732 11122223333333322222
Q ss_pred hHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHH
Q 011005 439 KVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLI 474 (496)
Q Consensus 439 ~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~ 474 (496)
.....+..++..|+..||+.||+...+++....
T Consensus 252 ---~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~~ 284 (375)
T KOG0591|consen 252 ---HYSTDLRELINMCIAVDPEQRPDTVPYVQDIQS 284 (375)
T ss_pred ---HhhhHHHHHHHHHccCCcccCCCcchHHHHHHH
Confidence 223346788899999999999996666655443
No 10
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=5.3e-48 Score=353.54 Aligned_cols=254 Identities=28% Similarity=0.437 Sum_probs=216.0
Q ss_pred HhCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchh--HHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEE
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEE--LAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLI 280 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV 280 (496)
.++|++.+.||+|+||.||.++.+ .++.+|+|++++..- ....+...+|..++.+++||.||+++..|++++.+|+|
T Consensus 24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylV 103 (357)
T KOG0598|consen 24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLV 103 (357)
T ss_pred hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEE
Confidence 467999999999999999999654 689999999987652 23456788999999999999999999999999999999
Q ss_pred EEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccC
Q 011005 281 YEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHA 360 (496)
Q Consensus 281 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 360 (496)
+||+.||.|..+|++.. .+++..+.-++..|+.||.||| ++||+||||||+|||+|.+|+++|+|||+++....
T Consensus 104 ld~~~GGeLf~hL~~eg---~F~E~~arfYlaEi~lAL~~LH---~~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~ 177 (357)
T KOG0598|consen 104 LDYLNGGELFYHLQREG---RFSEDRARFYLAEIVLALGYLH---SKGIIYRDLKPENILLDEQGHIKLTDFGLCKEDLK 177 (357)
T ss_pred EeccCCccHHHHHHhcC---CcchhHHHHHHHHHHHHHHHHH---hCCeeeccCCHHHeeecCCCcEEEeccccchhccc
Confidence 99999999999999766 7999999999999999999999 88999999999999999999999999999997766
Q ss_pred CCCCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhH
Q 011005 361 DSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKV 440 (496)
Q Consensus 361 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 440 (496)
.+....+.+||+.|||||++.+..|+..+|.||+|+++|||++|.+||.. .....+...+...+++.+..-
T Consensus 178 ~~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~-------~~~~~~~~~I~~~k~~~~p~~-- 248 (357)
T KOG0598|consen 178 DGDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYA-------EDVKKMYDKILKGKLPLPPGY-- 248 (357)
T ss_pred CCCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcC-------ccHHHHHHHHhcCcCCCCCcc--
Confidence 66667778999999999999999999999999999999999999999963 333444555555553322210
Q ss_pred HHHHHHHHHHHHhcccCCCCCCC----CHHHHHHHHHH
Q 011005 441 IRDILLISTVSFACLQSNPKSRP----TMQSVSQEFLI 474 (496)
Q Consensus 441 ~~~~~~l~~li~~cl~~dP~~Rp----s~~evl~~~~~ 474 (496)
......+++.++|..||++|. ++.++-+|+|+
T Consensus 249 --ls~~ardll~~LL~rdp~~RLg~~~d~~~ik~HpfF 284 (357)
T KOG0598|consen 249 --LSEEARDLLKKLLKRDPRQRLGGPGDAEEIKRHPFF 284 (357)
T ss_pred --CCHHHHHHHHHHhccCHHHhcCCCCChHHhhcCccc
Confidence 112356888899999999996 57776666554
No 11
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.4e-46 Score=347.27 Aligned_cols=266 Identities=24% Similarity=0.385 Sum_probs=222.1
Q ss_pred HhCCCCcceeeecCCeeEEEEE-eCCCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEE
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQ-LPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYE 282 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e 282 (496)
.+.|++...||.|..++||+|+ .+.++.||||++.-.......+.+.+|+..|+.++||||++++..|..+..+|+||.
T Consensus 25 ~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVmp 104 (516)
T KOG0582|consen 25 AKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVMP 104 (516)
T ss_pred ccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEeeh
Confidence 3579999999999999999995 567899999999887766667889999999999999999999999999999999999
Q ss_pred ecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCC
Q 011005 283 YMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADS 362 (496)
Q Consensus 283 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 362 (496)
||.+||+.+++...-.. .+++..+..|.+++++||.||| .+|.||||||+.|||++.+|.|||+|||.+..+...+
T Consensus 105 fMa~GS~ldIik~~~~~-Gl~E~~Ia~iLre~LkaL~YLH---~~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G 180 (516)
T KOG0582|consen 105 FMAGGSLLDIIKTYYPD-GLEEASIATILREVLKALDYLH---QNGHIHRDVKAGNILIDSDGTVKLADFGVSASLFDSG 180 (516)
T ss_pred hhcCCcHHHHHHHHccc-cccHHHHHHHHHHHHHHHHHHH---hcCceecccccccEEEcCCCcEEEcCceeeeeecccC
Confidence 99999999999875443 4899999999999999999999 7899999999999999999999999999988775544
Q ss_pred CCc----ccccccccccccccccc--CCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCC-
Q 011005 363 SNR----TLLAGTYGYIAPELAYT--MVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPP- 435 (496)
Q Consensus 363 ~~~----~~~~gt~~y~aPE~~~~--~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 435 (496)
... ...+||++|||||++.. ..|+.|+||||||++..||.+|+.||....+ -.+....+....+.+
T Consensus 181 ~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pP-------mkvLl~tLqn~pp~~~ 253 (516)
T KOG0582|consen 181 DRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPP-------MKVLLLTLQNDPPTLL 253 (516)
T ss_pred ceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCCh-------HHHHHHHhcCCCCCcc
Confidence 332 44589999999999654 4789999999999999999999999974432 223333333333311
Q ss_pred ----CChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCCC
Q 011005 436 ----VDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTPL 480 (496)
Q Consensus 436 ----~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~~ 480 (496)
..+....-...+.+++..||+.||++|||++++++|.|+......
T Consensus 254 t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh~FFk~~k~~ 302 (516)
T KOG0582|consen 254 TSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKHAFFKKAKSK 302 (516)
T ss_pred cccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhccHHHhhccch
Confidence 111122223368899999999999999999999999999877554
No 12
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-47 Score=358.65 Aligned_cols=273 Identities=21% Similarity=0.270 Sum_probs=218.9
Q ss_pred HHhCCCCcceeeecCCeeEEEEEe-CCCcEEEEEEcccchhHHHHHHHHHHHHHHHhhc-ccccccccceeecCC-eEEE
Q 011005 203 ATEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVL-HRNIVKLYGYCLHKK-CMFL 279 (496)
Q Consensus 203 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~-~~~l 279 (496)
..++|.+.+.||.|.||.||+|+. ..|..||||+++..--.-+.---.||++.+++++ ||||+++.+.+.+.+ .+++
T Consensus 8 ~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~f 87 (538)
T KOG0661|consen 8 FMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYF 87 (538)
T ss_pred HHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEee
Confidence 457899999999999999999954 5789999999987542211122378999999998 999999999999988 9999
Q ss_pred EEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEcccccccccc
Q 011005 280 IYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLH 359 (496)
Q Consensus 280 V~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 359 (496)
|||||+. +|+++++.. ...|++..++.|+.||++||+|+| .+|+.|||+||+|||+.....+||+|||+|+.+.
T Consensus 88 VfE~Md~-NLYqLmK~R--~r~fse~~irnim~QilqGL~hiH---k~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~ 161 (538)
T KOG0661|consen 88 VFEFMDC-NLYQLMKDR--NRLFSESDIRNIMYQILQGLAHIH---KHGFFHRDLKPENILISGNDVIKIADFGLAREVR 161 (538)
T ss_pred eHHhhhh-hHHHHHhhc--CCcCCHHHHHHHHHHHHHHHHHHH---hcCcccccCChhheEecccceeEecccccccccc
Confidence 9999975 999999876 448999999999999999999999 8899999999999999999999999999999875
Q ss_pred CCCCCccccccccccccccccc-cCCcCcccchhhHHHHHHHHHhCCCCCccccccC---------CC-----CCCcchh
Q 011005 360 ADSSNRTLLAGTYGYIAPELAY-TMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLS---------SS-----SDPKIML 424 (496)
Q Consensus 360 ~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~---------~~-----~~~~~~~ 424 (496)
.. ...+..+.|.+|+|||++. .+.|+.+.||||+|||++|+.+-++-|...+..+ +. .......
T Consensus 162 Sk-pPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~L 240 (538)
T KOG0661|consen 162 SK-PPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNL 240 (538)
T ss_pred cC-CCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHHH
Confidence 43 3456678999999999865 6789999999999999999999999887554321 01 1111223
Q ss_pred HhhhcCCCCCC----CChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCCCCC
Q 011005 425 IDVLDQRLPPP----VDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTPLVK 482 (496)
Q Consensus 425 ~~~~~~~~~~~----~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~~~~ 482 (496)
...+.-+++.- .............+++.+|+++||++|||+.|+++|+|+.-..+...
T Consensus 241 a~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~pffq~~~~~~~ 302 (538)
T KOG0661|consen 241 ASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQHPFFQVGRASGS 302 (538)
T ss_pred HHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcCccccccccccc
Confidence 33333333322 11222234456789999999999999999999999999987766643
No 13
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-46 Score=359.59 Aligned_cols=259 Identities=24% Similarity=0.372 Sum_probs=218.3
Q ss_pred hCCCCcceeeecCCeeEEEEE-eCCCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEe
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQ-LPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEY 283 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~ 283 (496)
..|.....||+|+.|.||.|. ...++.||||++....... .+-+.+|+.+|+..+|+|||.+++.|..++.+|+||||
T Consensus 273 ~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~-keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEy 351 (550)
T KOG0578|consen 273 SKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPK-KELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEY 351 (550)
T ss_pred hhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCc-hhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEee
Confidence 568888899999999999994 5578899999997655332 25578999999999999999999999999999999999
Q ss_pred cCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCC
Q 011005 284 MERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSS 363 (496)
Q Consensus 284 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 363 (496)
|+||+|.+.+... .+++.++..|++.+++||+||| .+||+|||||.+|||++.+|.+||+|||++..+.....
T Consensus 352 m~ggsLTDvVt~~----~~~E~qIA~Icre~l~aL~fLH---~~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~ 424 (550)
T KOG0578|consen 352 MEGGSLTDVVTKT----RMTEGQIAAICREILQGLKFLH---ARGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQS 424 (550)
T ss_pred cCCCchhhhhhcc----cccHHHHHHHHHHHHHHHHHHH---hcceeeeccccceeEeccCCcEEEeeeeeeeccccccC
Confidence 9999999999876 4899999999999999999999 88999999999999999999999999999999887776
Q ss_pred CccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHHHH
Q 011005 364 NRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVIRD 443 (496)
Q Consensus 364 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 443 (496)
.....+|||.|||||+.....|.++.||||||++++||+.|.+||=...+ ....-.+.....+.... ....
T Consensus 425 KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~P--------lrAlyLIa~ng~P~lk~-~~kl 495 (550)
T KOG0578|consen 425 KRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENP--------LRALYLIATNGTPKLKN-PEKL 495 (550)
T ss_pred ccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCCh--------HHHHHHHhhcCCCCcCC-cccc
Confidence 77788999999999999999999999999999999999999999842111 11111222222222211 2233
Q ss_pred HHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCCC
Q 011005 444 ILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTPL 480 (496)
Q Consensus 444 ~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~~ 480 (496)
...+.+|+.+||+.||++|+++.|+|+|+|+....+.
T Consensus 496 S~~~kdFL~~cL~~dv~~RasA~eLL~HpFl~~a~p~ 532 (550)
T KOG0578|consen 496 SPELKDFLDRCLVVDVEQRASAKELLEHPFLKMAKPE 532 (550)
T ss_pred CHHHHHHHHHHhhcchhcCCCHHHHhcChhhhhcCCH
Confidence 3458899999999999999999999999999655544
No 14
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-46 Score=359.41 Aligned_cols=251 Identities=27% Similarity=0.479 Sum_probs=206.8
Q ss_pred CCCCcceeeecCCeeEEEEEeCCCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEecC
Q 011005 206 DFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEYME 285 (496)
Q Consensus 206 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~~~ 285 (496)
.+...+.||+|.||+||.|.++....||+|.++...- ..+.|.+|+++|++++|++||+++++|..++.++||||||+
T Consensus 207 ~l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~m--~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~ 284 (468)
T KOG0197|consen 207 ELKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEGSM--SPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMP 284 (468)
T ss_pred HHHHHHHhcCCccceEEEEEEcCCCcccceEEecccc--ChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEecc
Confidence 3455677999999999999998888999999987542 22668899999999999999999999999889999999999
Q ss_pred CCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCCCc
Q 011005 286 RGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNR 365 (496)
Q Consensus 286 ~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 365 (496)
.|+|.++|.. .....++..+.+.++.||++|++||+ ++++|||||.++|||++++..+||+|||+|+...++....
T Consensus 285 ~GsLl~yLr~-~~~~~l~~~~Ll~~a~qIaeGM~YLe---s~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~~ 360 (468)
T KOG0197|consen 285 KGSLLDYLRT-REGGLLNLPQLLDFAAQIAEGMAYLE---SKNYIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYTA 360 (468)
T ss_pred cCcHHHHhhh-cCCCccchHHHHHHHHHHHHHHHHHH---hCCccchhhhhhheeeccCceEEEcccccccccCCCceee
Confidence 9999999997 33447899999999999999999999 7899999999999999999999999999999554433322
Q ss_pred c-ccccccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccCCCCCCcchhHhhh--cCCCCCCCChhHH
Q 011005 366 T-LLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSSDPKIMLIDVL--DQRLPPPVDRKVI 441 (496)
Q Consensus 366 ~-~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 441 (496)
. ...-+..|.|||.+....++.+|||||||++|||++| |+.|+.... . ....+.+ ..+++.|..
T Consensus 361 ~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~ms-------n-~ev~~~le~GyRlp~P~~---- 428 (468)
T KOG0197|consen 361 SEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMS-------N-EEVLELLERGYRLPRPEG---- 428 (468)
T ss_pred cCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCC-------H-HHHHHHHhccCcCCCCCC----
Confidence 1 1223458999999999999999999999999999998 888875322 1 1222222 245555543
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHh
Q 011005 442 RDILLISTVSFACLQSNPKSRPTMQSVSQEFLIT 475 (496)
Q Consensus 442 ~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~ 475 (496)
.+..+.+++..||..+|++||||+.+...+...
T Consensus 429 -CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~ 461 (468)
T KOG0197|consen 429 -CPDEVYELMKSCWHEDPEDRPTFETLREVLEDF 461 (468)
T ss_pred -CCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHh
Confidence 344578899999999999999999887766543
No 15
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=3.3e-46 Score=355.34 Aligned_cols=254 Identities=26% Similarity=0.413 Sum_probs=213.6
Q ss_pred HHhCCCCcceeeecCCeeEEEEEe-CCCcEEEEEEcccch--hHHHHHHHHHHHHHHHhh-cccccccccceeecCCeEE
Q 011005 203 ATEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQV-LHRNIVKLYGYCLHKKCMF 278 (496)
Q Consensus 203 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~ 278 (496)
...+|.+.+.||+|+|++|++|.. ..++.||||++.+.- .+.-.+-+.+|-.+|.+| .||+|++++-.|.+...+|
T Consensus 71 ~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLY 150 (604)
T KOG0592|consen 71 TPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLY 150 (604)
T ss_pred ChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceE
Confidence 346799999999999999999954 479999999986643 122235567899999999 7999999999999999999
Q ss_pred EEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccc
Q 011005 279 LIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLL 358 (496)
Q Consensus 279 lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 358 (496)
+|+||+++|+|.+++.+.+ .|++..++.++.+|+.||+||| +.|||||||||+|||+|++|+++|+|||.|+.+
T Consensus 151 FvLe~A~nGdll~~i~K~G---sfde~caR~YAAeIldAleylH---~~GIIHRDlKPENILLd~dmhikITDFGsAK~l 224 (604)
T KOG0592|consen 151 FVLEYAPNGDLLDLIKKYG---SFDETCARFYAAEILDALEYLH---SNGIIHRDLKPENILLDKDGHIKITDFGSAKIL 224 (604)
T ss_pred EEEEecCCCcHHHHHHHhC---cchHHHHHHHHHHHHHHHHHHH---hcCceeccCChhheeEcCCCcEEEeeccccccC
Confidence 9999999999999999876 8999999999999999999999 889999999999999999999999999999987
Q ss_pred cCCCCC-------------ccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhH
Q 011005 359 HADSSN-------------RTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLI 425 (496)
Q Consensus 359 ~~~~~~-------------~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~ 425 (496)
...... ...++||..|.+||++.+...++.+|+|+|||++|+|+.|.+||...+ +.....
T Consensus 225 ~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~N-------eyliFq 297 (604)
T KOG0592|consen 225 SPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAAN-------EYLIFQ 297 (604)
T ss_pred ChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCcccc-------HHHHHH
Confidence 542211 144789999999999999999999999999999999999999997433 222222
Q ss_pred hhh--cCCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhc
Q 011005 426 DVL--DQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITR 476 (496)
Q Consensus 426 ~~~--~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~ 476 (496)
.++ +...+.... ..+.+|+.+.|..||.+|+|.+||-+|+|+..
T Consensus 298 kI~~l~y~fp~~fp-------~~a~dLv~KLLv~dp~~Rlt~~qIk~HpFF~~ 343 (604)
T KOG0592|consen 298 KIQALDYEFPEGFP-------EDARDLIKKLLVRDPSDRLTSQQIKAHPFFEG 343 (604)
T ss_pred HHHHhcccCCCCCC-------HHHHHHHHHHHccCccccccHHHHhhCccccc
Confidence 222 233333322 24678999999999999999999999988743
No 16
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=8.3e-46 Score=322.97 Aligned_cols=267 Identities=25% Similarity=0.340 Sum_probs=213.9
Q ss_pred hCCCCcceeeecCCeeEEEEE-eCCCcEEEEEEcccchhH-HHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEE
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQ-LPNGKVFALKKLHTSEEL-AFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYE 282 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e 282 (496)
.+|...+.+|+|.||.||+|+ .++|+.||||+++..+.. .......+|++.++.++|+||+.++++|...+...+|+|
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfE 81 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFE 81 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEE
Confidence 367778899999999999995 568999999999876422 223567899999999999999999999999999999999
Q ss_pred ecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCC
Q 011005 283 YMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADS 362 (496)
Q Consensus 283 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 362 (496)
||+. +|...+.... ..++...+.+++.++++|++||| .+.|+||||||.|+|++.+|.+||+|||+|+.+..+.
T Consensus 82 fm~t-dLe~vIkd~~--i~l~pa~iK~y~~m~LkGl~y~H---~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~ 155 (318)
T KOG0659|consen 82 FMPT-DLEVVIKDKN--IILSPADIKSYMLMTLKGLAYCH---SKWILHRDLKPNNLLISSDGQLKIADFGLARFFGSPN 155 (318)
T ss_pred eccc-cHHHHhcccc--cccCHHHHHHHHHHHHHHHHHHH---hhhhhcccCCccceEEcCCCcEEeecccchhccCCCC
Confidence 9976 8988887643 36889999999999999999999 7899999999999999999999999999999998777
Q ss_pred CCccccccccccccccccccC-CcCcccchhhHHHHHHHHHhCCCCCcccccc-------------CCCCCCcc----hh
Q 011005 363 SNRTLLAGTYGYIAPELAYTM-VMTEKCDVYSFGVVTLEVLMGKHPRDILSSL-------------SSSSDPKI----ML 424 (496)
Q Consensus 363 ~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~el~~g~~p~~~~~~~-------------~~~~~~~~----~~ 424 (496)
......+-|.+|+|||.+.|. .|+..+||||.|||+.||+.|.+-|...++. .....++. ..
T Consensus 156 ~~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY 235 (318)
T KOG0659|consen 156 RIQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDY 235 (318)
T ss_pred cccccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccccH
Confidence 666666889999999998875 6899999999999999999998877543322 11111111 01
Q ss_pred HhhhcCCCCCC-CChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCC
Q 011005 425 IDVLDQRLPPP-VDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTP 479 (496)
Q Consensus 425 ~~~~~~~~~~~-~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~ 479 (496)
.++. ..+.+ .............+|+.+|+..||.+|+|+.|+++|.++.....
T Consensus 236 ~~~~--~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~yf~~~P~ 289 (318)
T KOG0659|consen 236 VKIQ--QFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKHPYFKSLPL 289 (318)
T ss_pred HHHh--cCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcchhhhcCCC
Confidence 1111 11111 11112222334579999999999999999999999999987443
No 17
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1e-45 Score=349.09 Aligned_cols=281 Identities=27% Similarity=0.357 Sum_probs=217.7
Q ss_pred HhCCCCcceeeecCCeeEEEEE-eCCCcEEEEEEcccch-hHHHHHHHHHHHHHHHhhcccccccccceeecC--CeEEE
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQ-LPNGKVFALKKLHTSE-ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHK--KCMFL 279 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~l 279 (496)
.+.|+.++.||+|.||.||||+ ..+|+.||+|+++... .+....-..+|+.+|++++||||+++.+...+. ..+||
T Consensus 116 ~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYl 195 (560)
T KOG0600|consen 116 ADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYL 195 (560)
T ss_pred hHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEE
Confidence 3457777889999999999995 5689999999998765 334455678999999999999999999988876 68999
Q ss_pred EEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEcccccccccc
Q 011005 280 IYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLH 359 (496)
Q Consensus 280 V~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 359 (496)
|+|||++ +|.-++.. ....|+..++..+++|++.||+||| ++||+|||||.+|||+|.+|.+||+|||+|+++.
T Consensus 196 VFeYMdh-DL~GLl~~--p~vkft~~qIKc~mkQLl~Gl~~cH---~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~ 269 (560)
T KOG0600|consen 196 VFEYMDH-DLSGLLSS--PGVKFTEPQIKCYMKQLLEGLEYCH---SRGVLHRDIKGSNILIDNNGVLKIADFGLARFYT 269 (560)
T ss_pred EEecccc-hhhhhhcC--CCcccChHHHHHHHHHHHHHHHHHh---hcCeeeccccccceEEcCCCCEEeccccceeecc
Confidence 9999987 67666654 2347999999999999999999999 8899999999999999999999999999999886
Q ss_pred CCCCC-ccccccccccccccccccC-CcCcccchhhHHHHHHHHHhCCCCCcccccc---------CCCCCCcchhHhhh
Q 011005 360 ADSSN-RTLLAGTYGYIAPELAYTM-VMTEKCDVYSFGVVTLEVLMGKHPRDILSSL---------SSSSDPKIMLIDVL 428 (496)
Q Consensus 360 ~~~~~-~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~el~~g~~p~~~~~~~---------~~~~~~~~~~~~~~ 428 (496)
..... .+..+-|.+|+|||++.|. .|+.++|+||.||||.||++|++.|+..... .....+..+....+
T Consensus 270 ~~~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~kL 349 (560)
T KOG0600|consen 270 PSGSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSKL 349 (560)
T ss_pred CCCCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccccccC
Confidence 65543 6677889999999998876 7999999999999999999999998744321 11111111110000
Q ss_pred c----CCCCCCCChhH----HHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCCCCCcccccccc
Q 011005 429 D----QRLPPPVDRKV----IRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTPLVKHAAIQDIS 490 (496)
Q Consensus 429 ~----~~~~~~~~~~~----~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~~~~~~~~~~i~ 490 (496)
. .+...++.... ..-.....+|+..+|..||.+|.|+.++|++.|+...........++..+
T Consensus 350 P~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~seyF~t~p~~~~p~~Lp~y~ 419 (560)
T KOG0600|consen 350 PHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQSEYFTTEPLPCDPSSLPKYP 419 (560)
T ss_pred CcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhcCcccccCCCCCCcccCCCCC
Confidence 0 00001111100 11123467899999999999999999999999996666665666555543
No 18
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=9e-46 Score=345.24 Aligned_cols=260 Identities=27% Similarity=0.414 Sum_probs=208.4
Q ss_pred hCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCC--eEEEEE
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKK--CMFLIY 281 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~--~~~lV~ 281 (496)
.++...+.||+|+||+||++... +|...|||.+....... .+.+.+|+.++++++|||||+++|...... .+++.|
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~-~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~m 95 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPT-SESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFM 95 (313)
T ss_pred chhhhhccccCccceEEEEEEecCCCcceeeeeeecccchh-HHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeee
Confidence 35677888999999999999765 48999999987764333 577899999999999999999999855544 689999
Q ss_pred EecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecC-CCCeEEccccccccccC
Q 011005 282 EYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNS-KLEAFVADFGTARLLHA 360 (496)
Q Consensus 282 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~-~~~~kl~Dfg~~~~~~~ 360 (496)
||+++|+|.+++.+.+. .+++..+..+.+||++||+||| ++||+||||||+|||++. ++.+||+|||+++....
T Consensus 96 Ey~~~GsL~~~~~~~g~--~l~E~~v~~ytr~iL~GL~ylH---s~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~ 170 (313)
T KOG0198|consen 96 EYAPGGSLSDLIKRYGG--KLPEPLVRRYTRQILEGLAYLH---SKGIVHCDIKPANILLDPSNGDVKLADFGLAKKLES 170 (313)
T ss_pred eccCCCcHHHHHHHcCC--CCCHHHHHHHHHHHHHHHHHHH---hCCEeccCcccceEEEeCCCCeEEeccCcccccccc
Confidence 99999999999997654 6899999999999999999999 889999999999999999 79999999999987763
Q ss_pred C---CCCccccccccccccccccccC-CcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCC
Q 011005 361 D---SSNRTLLAGTYGYIAPELAYTM-VMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPV 436 (496)
Q Consensus 361 ~---~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (496)
. ........||+.|||||++.++ ....++||||+||++.||+||+.||... .........+......+..
T Consensus 171 ~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~------~~~~~~~~~ig~~~~~P~i 244 (313)
T KOG0198|consen 171 KGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEF------FEEAEALLLIGREDSLPEI 244 (313)
T ss_pred ccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhh------cchHHHHHHHhccCCCCCC
Confidence 1 1223346799999999999963 3345999999999999999999999742 1111112222212111111
Q ss_pred ChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCC
Q 011005 437 DRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTP 479 (496)
Q Consensus 437 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~ 479 (496)
.. .......+++.+|+..||++|||++++|+|+|.....+
T Consensus 245 p~---~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~~~~ 284 (313)
T KOG0198|consen 245 PD---SLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFLKQNSI 284 (313)
T ss_pred Cc---ccCHHHHHHHHHHhhcCcccCcCHHHHhhChhhhcccc
Confidence 11 12234678999999999999999999999999988776
No 19
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.4e-45 Score=354.31 Aligned_cols=257 Identities=22% Similarity=0.357 Sum_probs=214.4
Q ss_pred HHhCCCCcceeeecCCeeEEEEEe-CCCcEEEEEEcccc----hhHHHHHHHHHHHHHHHhhc-ccccccccceeecCCe
Q 011005 203 ATEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTS----EELAFIKSFKNEAQVLSQVL-HRNIVKLYGYCLHKKC 276 (496)
Q Consensus 203 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~----~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~ 276 (496)
..++|.+.+.||+|+||+|+.|.+ .+++.||+|.+... ......+.+.+|+.++++++ ||||+++++++.....
T Consensus 15 ~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~ 94 (370)
T KOG0583|consen 15 SIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTK 94 (370)
T ss_pred ccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCe
Confidence 456899999999999999999954 46899999976553 11123456678999999998 9999999999999999
Q ss_pred EEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCC-CCeEEcccccc
Q 011005 277 MFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSK-LEAFVADFGTA 355 (496)
Q Consensus 277 ~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~-~~~kl~Dfg~~ 355 (496)
.++||||+.||.|++++.... .+.+.++..++.|++.|++||| .+||+||||||+|+|++.+ +++||+|||++
T Consensus 95 ~~ivmEy~~gGdL~~~i~~~g---~l~E~~ar~~F~Qlisav~y~H---~~gi~HRDLK~ENilld~~~~~~Kl~DFG~s 168 (370)
T KOG0583|consen 95 IYIVMEYCSGGDLFDYIVNKG---RLKEDEARKYFRQLISAVAYCH---SRGIVHRDLKPENILLDGNEGNLKLSDFGLS 168 (370)
T ss_pred EEEEEEecCCccHHHHHHHcC---CCChHHHHHHHHHHHHHHHHHH---hCCEeeCCCCHHHEEecCCCCCEEEeccccc
Confidence 999999999999999998743 6888999999999999999999 7899999999999999999 99999999999
Q ss_pred ccccCCCCCccccccccccccccccccCC-cC-cccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCC
Q 011005 356 RLLHADSSNRTLLAGTYGYIAPELAYTMV-MT-EKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLP 433 (496)
Q Consensus 356 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~-~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (496)
...........+.+||+.|+|||++.+.. |+ .++||||+|++||.|++|+.||+.. ........+......
T Consensus 169 ~~~~~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~-------~~~~l~~ki~~~~~~ 241 (370)
T KOG0583|consen 169 AISPGEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDS-------NVPNLYRKIRKGEFK 241 (370)
T ss_pred cccCCCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCc-------cHHHHHHHHhcCCcc
Confidence 88753445567789999999999999987 86 6899999999999999999999842 122222233333332
Q ss_pred CCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhc
Q 011005 434 PPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITR 476 (496)
Q Consensus 434 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~ 476 (496)
-+..-. ...+..|+.+||..||.+|+|+.++++|+|++.
T Consensus 242 ~p~~~~----S~~~~~Li~~mL~~~P~~R~t~~~i~~h~w~~~ 280 (370)
T KOG0583|consen 242 IPSYLL----SPEARSLIEKMLVPDPSTRITLLEILEHPWFQK 280 (370)
T ss_pred CCCCcC----CHHHHHHHHHHcCCCcccCCCHHHHhhChhhcc
Confidence 222110 234678999999999999999999999999997
No 20
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=5.9e-46 Score=354.00 Aligned_cols=262 Identities=26% Similarity=0.364 Sum_probs=221.8
Q ss_pred hCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccc-hhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEE
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTS-EELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYE 282 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e 282 (496)
++|.+.+.||+|.||.||||+.+ +.+.||+|.+.+. ..+.+.+.+.+|++++++++||||+.++++|+...++|+|.|
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte 81 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTE 81 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEeh
Confidence 57888899999999999999765 5889999998664 345677889999999999999999999999999999999999
Q ss_pred ecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCC
Q 011005 283 YMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADS 362 (496)
Q Consensus 283 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 362 (496)
|+.| +|..++.... .++++.+..++.|++.||.||| +.+|.|||+||.|||++.++.+|+||||+|+.+....
T Consensus 82 ~a~g-~L~~il~~d~---~lpEe~v~~~a~~LVsaL~yLh---s~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~t 154 (808)
T KOG0597|consen 82 YAVG-DLFTILEQDG---KLPEEQVRAIAYDLVSALYYLH---SNRILHRDMKPQNILLEKGGTLKLCDFGLARAMSTNT 154 (808)
T ss_pred hhhh-hHHHHHHhcc---CCCHHHHHHHHHHHHHHHHHHH---hcCcccccCCcceeeecCCCceeechhhhhhhcccCc
Confidence 9987 9999998765 7899999999999999999999 8899999999999999999999999999999887766
Q ss_pred CCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHHH
Q 011005 363 SNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVIR 442 (496)
Q Consensus 363 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (496)
...+...|||.|||||...+..|+..+|.||+||++||+.+|++||-..+ .....+.+-+....+ +..
T Consensus 155 ~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~s--------i~~Lv~~I~~d~v~~----p~~ 222 (808)
T KOG0597|consen 155 SVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARS--------ITQLVKSILKDPVKP----PST 222 (808)
T ss_pred eeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHH--------HHHHHHHHhcCCCCC----ccc
Confidence 66667789999999999999999999999999999999999999984211 111122221211111 113
Q ss_pred HHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCCCCCccc
Q 011005 443 DILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTPLVKHAA 485 (496)
Q Consensus 443 ~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~~~~~~~ 485 (496)
....+.+++...|.+||.+|.|..+++.|+|...+......++
T Consensus 223 ~S~~f~nfl~gLL~kdP~~RltW~~Ll~HpF~k~~~~~~~~~~ 265 (808)
T KOG0597|consen 223 ASSSFVNFLQGLLIKDPAQRLTWTDLLGHPFWKGKINIAELPA 265 (808)
T ss_pred ccHHHHHHHHHHhhcChhhcccHHHHhcChHHhhhhhhhcccc
Confidence 3345789999999999999999999999999988766554443
No 21
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=1.2e-44 Score=344.96 Aligned_cols=255 Identities=26% Similarity=0.399 Sum_probs=210.1
Q ss_pred HhCCCCcceeeecCCeeEEEEEe-CCCcEEEEEEcccch--hHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEE
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLI 280 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV 280 (496)
.++|++...||+|+||.||+|+- .+|..+|+|+++++. .....+.+..|-.+|...++|.||+++..|++++.+|||
T Consensus 140 ~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYLi 219 (550)
T KOG0605|consen 140 LDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYLI 219 (550)
T ss_pred cccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEEE
Confidence 47899999999999999999964 469999999998865 334456788999999999999999999999999999999
Q ss_pred EEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccC
Q 011005 281 YEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHA 360 (496)
Q Consensus 281 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 360 (496)
|||++||++..+|.... .+++..+..++.+++.|++.+| ..|+|||||||+|+|||..|++||+|||++..+..
T Consensus 220 MEylPGGD~mTLL~~~~---~L~e~~arfYiaE~vlAI~~iH---~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~ 293 (550)
T KOG0605|consen 220 MEYLPGGDMMTLLMRKD---TLTEDWARFYIAETVLAIESIH---QLGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDK 293 (550)
T ss_pred EEecCCccHHHHHHhcC---cCchHHHHHHHHHHHHHHHHHH---HcCcccccCChhheeecCCCCEeeccccccchhhh
Confidence 99999999999998765 7899999999999999999999 88999999999999999999999999999964311
Q ss_pred C----------------------CCC-----c--------------------cccccccccccccccccCCcCcccchhh
Q 011005 361 D----------------------SSN-----R--------------------TLLAGTYGYIAPELAYTMVMTEKCDVYS 393 (496)
Q Consensus 361 ~----------------------~~~-----~--------------------~~~~gt~~y~aPE~~~~~~~~~~~Dvws 393 (496)
. ... . ...+|||.|+|||++.+..|+..+|.||
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWS 373 (550)
T KOG0605|consen 294 KHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWS 373 (550)
T ss_pred hhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHH
Confidence 0 000 0 0136999999999999999999999999
Q ss_pred HHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCC--CCCCCChhHHHHHHHHHHHHHhcccCCCCCCCC---HHHH
Q 011005 394 FGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQR--LPPPVDRKVIRDILLISTVSFACLQSNPKSRPT---MQSV 468 (496)
Q Consensus 394 lG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps---~~ev 468 (496)
+|||+|||+.|.+||.. ..+......++.-+ +..+...... ....+||.+|+. ||++|.- ++||
T Consensus 374 LG~ImyEmLvGyPPF~s-------~tp~~T~rkI~nwr~~l~fP~~~~~s---~eA~DLI~rll~-d~~~RLG~~G~~EI 442 (550)
T KOG0605|consen 374 LGCIMYEMLVGYPPFCS-------ETPQETYRKIVNWRETLKFPEEVDLS---DEAKDLITRLLC-DPENRLGSKGAEEI 442 (550)
T ss_pred HHHHHHHHHhCCCCCCC-------CCHHHHHHHHHHHhhhccCCCcCccc---HHHHHHHHHHhc-CHHHhcCcccHHHH
Confidence 99999999999999963 33333333333322 3333222222 346789999999 9999985 8888
Q ss_pred HHHHHHh
Q 011005 469 SQEFLIT 475 (496)
Q Consensus 469 l~~~~~~ 475 (496)
-+|+|+.
T Consensus 443 K~HPfF~ 449 (550)
T KOG0605|consen 443 KKHPFFK 449 (550)
T ss_pred hcCCccc
Confidence 8887774
No 22
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.1e-46 Score=344.29 Aligned_cols=257 Identities=31% Similarity=0.443 Sum_probs=220.6
Q ss_pred hCCCCcceeeecCCeeEEEEEe-CCCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEe
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEY 283 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~ 283 (496)
..|+..++||+|.||.||||.+ ..++.||+|++.-............|+.++..++++||.++|+.+..+..++++|||
T Consensus 13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey 92 (467)
T KOG0201|consen 13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEY 92 (467)
T ss_pred cccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHH
Confidence 4577778999999999999954 578999999998877666678889999999999999999999999999999999999
Q ss_pred cCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCC
Q 011005 284 MERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSS 363 (496)
Q Consensus 284 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 363 (496)
|.||++.+.+.... .+++..+.-|++++..|+.||| ..+.+|||||+.|||+..+|.+|++|||.+..+.....
T Consensus 93 ~~gGsv~~lL~~~~---~~~E~~i~~ilre~l~~l~ylH---~~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~ 166 (467)
T KOG0201|consen 93 CGGGSVLDLLKSGN---ILDEFEIAVILREVLKGLDYLH---SEKKIHRDIKAANILLSESGDVKLADFGVAGQLTNTVK 166 (467)
T ss_pred hcCcchhhhhccCC---CCccceeeeehHHHHHHhhhhh---hcceecccccccceeEeccCcEEEEecceeeeeechhh
Confidence 99999999998654 3466777778999999999999 78999999999999999999999999999998877766
Q ss_pred CccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHHHH
Q 011005 364 NRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVIRD 443 (496)
Q Consensus 364 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 443 (496)
...+++|||.|||||++.+..|+.++||||||++.+||.+|.+|+....++ ...-.+.+..++..+. ..
T Consensus 167 rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPm--------rvlflIpk~~PP~L~~---~~ 235 (467)
T KOG0201|consen 167 RRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPM--------RVLFLIPKSAPPRLDG---DF 235 (467)
T ss_pred ccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcc--------eEEEeccCCCCCcccc---cc
Confidence 667899999999999999999999999999999999999999998755432 1122223333333333 22
Q ss_pred HHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccC
Q 011005 444 ILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKT 478 (496)
Q Consensus 444 ~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~ 478 (496)
...+.+|+..||..||+.|||+.++++|.|+.+..
T Consensus 236 S~~~kEFV~~CL~k~P~~RpsA~~LLKh~FIk~a~ 270 (467)
T KOG0201|consen 236 SPPFKEFVEACLDKNPEFRPSAKELLKHKFIKRAK 270 (467)
T ss_pred CHHHHHHHHHHhhcCcccCcCHHHHhhhHHHHhcC
Confidence 33478999999999999999999999999998844
No 23
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.8e-44 Score=350.41 Aligned_cols=260 Identities=24% Similarity=0.366 Sum_probs=219.1
Q ss_pred hCCCCcceeeecCCeeEEEEEe-CCCcEEEEEEcccch--hHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEE
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIY 281 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~ 281 (496)
+-|.+.+.||.|+-|.|-.|++ .+|+.+|||.+.... .......+.+|+-+|+.+.|||++++|+.++++.++|+|.
T Consensus 12 GpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvl 91 (786)
T KOG0588|consen 12 GPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVL 91 (786)
T ss_pred cceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEE
Confidence 4577889999999999999965 579999999997652 2223356789999999999999999999999999999999
Q ss_pred EecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCC
Q 011005 282 EYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHAD 361 (496)
Q Consensus 282 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 361 (496)
||++||-|++++...+ .+++.++.++++||+.|+.||| ..+|+|||+||+|+|++..+++||+|||+|.... +
T Consensus 92 Eyv~gGELFdylv~kG---~l~e~eaa~ff~QIi~gv~yCH---~~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~-~ 164 (786)
T KOG0588|consen 92 EYVPGGELFDYLVRKG---PLPEREAAHFFRQILDGVSYCH---AFNICHRDLKPENLLLDVKNNIKIADFGMASLEV-P 164 (786)
T ss_pred EecCCchhHHHHHhhC---CCCCHHHHHHHHHHHHHHHHHh---hhcceeccCCchhhhhhcccCEeeeccceeeccc-C
Confidence 9999999999998766 7899999999999999999999 7899999999999999999999999999997653 4
Q ss_pred CCCccccccccccccccccccCCcC-cccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhH
Q 011005 362 SSNRTLLAGTYGYIAPELAYTMVMT-EKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKV 440 (496)
Q Consensus 362 ~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 440 (496)
+.-..+.||+|.|+|||++.|..|. .++||||.|||||.|+||+.||++ ..-......+..+....+..
T Consensus 165 gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdD-------dNir~LLlKV~~G~f~MPs~--- 234 (786)
T KOG0588|consen 165 GKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDD-------DNIRVLLLKVQRGVFEMPSN--- 234 (786)
T ss_pred CccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCC-------ccHHHHHHHHHcCcccCCCc---
Confidence 4556678999999999999999986 589999999999999999999972 22222333444443333321
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCCCCCc
Q 011005 441 IRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTPLVKH 483 (496)
Q Consensus 441 ~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~~~~~ 483 (496)
.....++|+.+|+..||++|.|++||++|+|....+-....
T Consensus 235 --Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP~l~g~~~~~~~ 275 (786)
T KOG0588|consen 235 --ISSEAQDLLRRMLDVDPSTRITTEEILKHPFLSGYTSLPSS 275 (786)
T ss_pred --CCHHHHHHHHHHhccCccccccHHHHhhCchhhcCCCCChh
Confidence 12246789999999999999999999999999987665544
No 24
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=6.4e-44 Score=315.76 Aligned_cols=250 Identities=26% Similarity=0.394 Sum_probs=211.6
Q ss_pred HhCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccch--hHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEE
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLI 280 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV 280 (496)
.++|+..+.||.|+||.|.+++.+ +|..+|+|++.... .....+...+|..+++.+.||.++++++.+.+...++||
T Consensus 43 l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymv 122 (355)
T KOG0616|consen 43 LQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMV 122 (355)
T ss_pred hhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEE
Confidence 357899999999999999999765 68899999998764 233445678999999999999999999999999999999
Q ss_pred EEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccC
Q 011005 281 YEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHA 360 (496)
Q Consensus 281 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 360 (496)
|||.+||.|+.++.+.+ ++++..++-++.||+.||+||| +.+|++||+||+|||+|.+|.+||+|||.|+.+..
T Consensus 123 meyv~GGElFS~Lrk~~---rF~e~~arFYAAeivlAleylH---~~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~ 196 (355)
T KOG0616|consen 123 MEYVPGGELFSYLRKSG---RFSEPHARFYAAEIVLALEYLH---SLDIIYRDLKPENLLLDQNGHIKITDFGFAKRVSG 196 (355)
T ss_pred EeccCCccHHHHHHhcC---CCCchhHHHHHHHHHHHHHHHH---hcCeeeccCChHHeeeccCCcEEEEeccceEEecC
Confidence 99999999999999876 7999999999999999999999 88999999999999999999999999999998854
Q ss_pred CCCCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhH
Q 011005 361 DSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKV 440 (496)
Q Consensus 361 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 440 (496)
. .-+.||||.|+|||++....|..++|.||||+++|||+.|.+||.. ..+......++...+..|.--
T Consensus 197 r---T~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~-------~~~~~iY~KI~~~~v~fP~~f-- 264 (355)
T KOG0616|consen 197 R---TWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYD-------DNPIQIYEKILEGKVKFPSYF-- 264 (355)
T ss_pred c---EEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcC-------CChHHHHHHHHhCcccCCccc--
Confidence 3 4568999999999999999999999999999999999999999963 233445555665555433221
Q ss_pred HHHHHHHHHHHHhcccCCCCCCC-----CHHHHHHHHHH
Q 011005 441 IRDILLISTVSFACLQSNPKSRP-----TMQSVSQEFLI 474 (496)
Q Consensus 441 ~~~~~~l~~li~~cl~~dP~~Rp-----s~~evl~~~~~ 474 (496)
...+.+|+.+.|+.|-.+|. -..+|-.|+|+
T Consensus 265 ---s~~~kdLl~~LL~vD~t~R~gnlknG~~dIk~H~wF 300 (355)
T KOG0616|consen 265 ---SSDAKDLLKKLLQVDLTKRFGNLKNGVEDIKNHPWF 300 (355)
T ss_pred ---CHHHHHHHHHHHhhhhHhhhcCcCCCccccccCccc
Confidence 11356888899999999982 34455555555
No 25
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.3e-44 Score=311.04 Aligned_cols=256 Identities=30% Similarity=0.434 Sum_probs=216.7
Q ss_pred HhCCCCcceeeecCCeeEEEEEe-CCCcEEEEEEcccch--hHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEE
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLI 280 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV 280 (496)
.++|++.+.||+|.||.||.|+. +++-.||+|++.+.. ......++.+|+++.+.++||||+++|++|.+....|++
T Consensus 21 l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLi 100 (281)
T KOG0580|consen 21 LDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLI 100 (281)
T ss_pred hhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEE
Confidence 46899999999999999999965 568899999998764 233456789999999999999999999999999999999
Q ss_pred EEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccC
Q 011005 281 YEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHA 360 (496)
Q Consensus 281 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 360 (496)
+||..+|.++..|...... .+++.....++.|++.|+.|+| .++|+||||||+|+|++..+..||+|||.+..-.
T Consensus 101 lEya~~gel~k~L~~~~~~-~f~e~~~a~Yi~q~A~Al~y~h---~k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p- 175 (281)
T KOG0580|consen 101 LEYAPRGELYKDLQEGRMK-RFDEQRAATYIKQLANALLYCH---LKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP- 175 (281)
T ss_pred EEecCCchHHHHHHhcccc-cccccchhHHHHHHHHHHHHhc---cCCcccCCCCHHHhccCCCCCeeccCCCceeecC-
Confidence 9999999999999954433 6888999999999999999999 8899999999999999999999999999996543
Q ss_pred CCCCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhH
Q 011005 361 DSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKV 440 (496)
Q Consensus 361 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 440 (496)
.....+.+||..|.+||...+..++..+|+|++|++.||++.|.+||.... ......++..-.+..+.
T Consensus 176 -~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~-------~~etYkrI~k~~~~~p~---- 243 (281)
T KOG0580|consen 176 -SNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQS-------HSETYKRIRKVDLKFPS---- 243 (281)
T ss_pred -CCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhh-------hHHHHHHHHHccccCCc----
Confidence 555677899999999999999999999999999999999999999997322 23333333332222221
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhcc
Q 011005 441 IRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRK 477 (496)
Q Consensus 441 ~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~ 477 (496)
.......++|.+|+..+|.+|.+..|++.|+|+...
T Consensus 244 -~is~~a~dlI~~ll~~~p~~r~~l~~v~~hpwI~a~ 279 (281)
T KOG0580|consen 244 -TISGGAADLISRLLVKNPIERLALTEVMDHPWIVAN 279 (281)
T ss_pred -ccChhHHHHHHHHhccCccccccHHHHhhhHHHHhc
Confidence 111246789999999999999999999999998753
No 26
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-46 Score=322.18 Aligned_cols=270 Identities=24% Similarity=0.340 Sum_probs=219.7
Q ss_pred HHhCCCCcceeeecCCeeEEEE-EeCCCcEEEEEEcccch-hHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEE
Q 011005 203 ATEDFDIRYCIGTGGYGSVYKA-QLPNGKVFALKKLHTSE-ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLI 280 (496)
Q Consensus 203 ~~~~~~~~~~lg~G~~g~Vy~~-~~~~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV 280 (496)
..+.|++.+.||+|+|+.||++ ..+.|+.+|+|.+.... .....+.+.+|+.+.+.++||||+++.+.+.+....++|
T Consensus 9 f~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylv 88 (355)
T KOG0033|consen 9 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 88 (355)
T ss_pred cchhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEE
Confidence 4567888899999999999999 45689999999886533 223457889999999999999999999999999999999
Q ss_pred EEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecC---CCCeEEcccccccc
Q 011005 281 YEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNS---KLEAFVADFGTARL 357 (496)
Q Consensus 281 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~---~~~~kl~Dfg~~~~ 357 (496)
+|+|+|+.|..-+.... .+++..+-..+.||+.||+|+| .++|+|||+||+|+++.. ..-+||+|||+|..
T Consensus 89 Fe~m~G~dl~~eIV~R~---~ySEa~aSH~~rQiLeal~yCH---~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~ 162 (355)
T KOG0033|consen 89 FDLVTGGELFEDIVARE---FYSEADASHCIQQILEALAYCH---SNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIE 162 (355)
T ss_pred EecccchHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHH---hcCceeccCChhheeeeeccCCCceeecccceEEE
Confidence 99999999976665542 6788889999999999999999 889999999999999954 34599999999999
Q ss_pred ccCCCCCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCC
Q 011005 358 LHADSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVD 437 (496)
Q Consensus 358 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (496)
+. +.......+|||+|||||++...+|+..+|||+.|++||-|+.|.+||...+ .......++......+.
T Consensus 163 l~-~g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~-------~~rlye~I~~g~yd~~~- 233 (355)
T KOG0033|consen 163 VN-DGEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDED-------QHRLYEQIKAGAYDYPS- 233 (355)
T ss_pred eC-CccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCcc-------HHHHHHHHhccccCCCC-
Confidence 87 5555667899999999999999999999999999999999999999996322 22223333333332221
Q ss_pred hhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCCCCCccccc
Q 011005 438 RKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTPLVKHAAIQ 487 (496)
Q Consensus 438 ~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~~~~~~~~~ 487 (496)
..+........+|+.+||..||.+|.|+.|.|+|+|+..+....+.-..+
T Consensus 234 ~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~HpWi~~r~~~As~~H~~ 283 (355)
T KOG0033|consen 234 PEWDTVTPEAKSLIRRMLTVNPKKRITADEALKHPWICNRERVASAIHRQ 283 (355)
T ss_pred cccCcCCHHHHHHHHHHhccChhhhccHHHHhCCchhcchHHHHHHhhhH
Confidence 11223334567999999999999999999999999998876655444333
No 27
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=3e-44 Score=345.95 Aligned_cols=265 Identities=27% Similarity=0.443 Sum_probs=213.9
Q ss_pred HHHHHHHhCCCCcceeeecCCeeEEEEEeCCCcEEEEEEcccch-hHHHHHHHHHHHHHHHhhcccccccccceeecCCe
Q 011005 198 EDLIEATEDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSE-ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKC 276 (496)
Q Consensus 198 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 276 (496)
+++....+++.+...||+|.||+||+|.|- -.||||++.... ..+..+.|++|+.++++-+|.||+-+.|||..+..
T Consensus 385 ~~WeIp~~ev~l~~rIGsGsFGtV~Rg~wh--GdVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~ 462 (678)
T KOG0193|consen 385 EEWEIPPEEVLLGERIGSGSFGTVYRGRWH--GDVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPL 462 (678)
T ss_pred cccccCHHHhhccceeccccccceeecccc--cceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCce
Confidence 455555677888999999999999999984 368999997754 44567899999999999999999999999999887
Q ss_pred EEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccc
Q 011005 277 MFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTAR 356 (496)
Q Consensus 277 ~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~ 356 (496)
.||+.+|+|-+|+.+++..+ .+|...+.+.|+.||++|+.||| .++|||||||..|||+.+++.|||+|||++.
T Consensus 463 -AIiTqwCeGsSLY~hlHv~e--tkfdm~~~idIAqQiaqGM~YLH---AK~IIHrDLKSnNIFl~~~~kVkIgDFGLat 536 (678)
T KOG0193|consen 463 -AIITQWCEGSSLYTHLHVQE--TKFDMNTTIDIAQQIAQGMDYLH---AKNIIHRDLKSNNIFLHEDLKVKIGDFGLAT 536 (678)
T ss_pred -eeeehhccCchhhhhccchh--hhhhHHHHHHHHHHHHHhhhhhh---hhhhhhhhccccceEEccCCcEEEeccccee
Confidence 99999999999999999765 37899999999999999999999 8899999999999999999999999999996
Q ss_pred cccC--CCCCccccccccccccccccccC---CcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCC
Q 011005 357 LLHA--DSSNRTLLAGTYGYIAPELAYTM---VMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQR 431 (496)
Q Consensus 357 ~~~~--~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 431 (496)
.-.. .........|...|||||+++.. +|++.+||||||+++|||++|..||.+.. .+..+..+=++.
T Consensus 537 vk~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~-------~dqIifmVGrG~ 609 (678)
T KOG0193|consen 537 VKTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQN-------RDQIIFMVGRGY 609 (678)
T ss_pred eeeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCC-------hhheEEEecccc
Confidence 5332 22233445678899999998743 68899999999999999999999997221 111111111222
Q ss_pred CCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhcc
Q 011005 432 LPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRK 477 (496)
Q Consensus 432 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~ 477 (496)
+.+............+.+|+..||..++++||.+.+++..+.....
T Consensus 610 l~pd~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~ 655 (678)
T KOG0193|consen 610 LMPDLSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLP 655 (678)
T ss_pred cCccchhhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhh
Confidence 2223333333445568899999999999999999999997666555
No 28
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=3.8e-44 Score=329.10 Aligned_cols=253 Identities=22% Similarity=0.387 Sum_probs=218.0
Q ss_pred HhCCCCcceeeecCCeeEEEEE-eCCCcEEEEEEcccch--hHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEE
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQ-LPNGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLI 280 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV 280 (496)
.-+|++.+.||+|.||.|-+|. ++.|+.||||.++++. +.+..-.+.+|+++|+.++||||+.+|++|+.++...+|
T Consensus 52 kHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIviv 131 (668)
T KOG0611|consen 52 KHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIV 131 (668)
T ss_pred hhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEE
Confidence 3468888999999999999995 5789999999998865 344455678999999999999999999999999999999
Q ss_pred EEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccC
Q 011005 281 YEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHA 360 (496)
Q Consensus 281 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 360 (496)
|||..+|.|++++...+ .+++.+++.+++||+.|+.||| +++++|||||.+|||+|.++++||+|||++..+..
T Consensus 132 MEYaS~GeLYDYiSer~---~LsErEaRhfFRQIvSAVhYCH---knrVvHRDLKLENILLD~N~NiKIADFGLSNly~~ 205 (668)
T KOG0611|consen 132 MEYASGGELYDYISERG---SLSEREARHFFRQIVSAVHYCH---KNRVVHRDLKLENILLDQNNNIKIADFGLSNLYAD 205 (668)
T ss_pred EEecCCccHHHHHHHhc---cccHHHHHHHHHHHHHHHHHHh---hccceecccchhheeecCCCCeeeeccchhhhhcc
Confidence 99999999999999876 7999999999999999999999 88999999999999999999999999999988764
Q ss_pred CCCCccccccccccccccccccCCcC-cccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChh
Q 011005 361 DSSNRTLLAGTYGYIAPELAYTMVMT-EKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRK 439 (496)
Q Consensus 361 ~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 439 (496)
. ...+++||+|-|.+||+..|..|. +.+|.||+|++||.|+.|..||+. .+......++.......+....
T Consensus 206 ~-kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG-------~Dhk~lvrQIs~GaYrEP~~PS 277 (668)
T KOG0611|consen 206 K-KFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDG-------RDHKRLVRQISRGAYREPETPS 277 (668)
T ss_pred c-cHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCC-------chHHHHHHHhhcccccCCCCCc
Confidence 3 446778999999999999999985 689999999999999999999983 3344445555555444333221
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhc
Q 011005 440 VIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITR 476 (496)
Q Consensus 440 ~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~ 476 (496)
...-||.+||..+|++|.|+.+|..|-|..-
T Consensus 278 ------dA~gLIRwmLmVNP~RRATieDiAsHWWvNw 308 (668)
T KOG0611|consen 278 ------DASGLIRWMLMVNPERRATIEDIASHWWVNW 308 (668)
T ss_pred ------hHHHHHHHHHhcCcccchhHHHHhhhheeec
Confidence 2346778999999999999999999998753
No 29
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=2.3e-43 Score=338.30 Aligned_cols=251 Identities=26% Similarity=0.366 Sum_probs=207.6
Q ss_pred hCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccch--hHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEE
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIY 281 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~ 281 (496)
++|++.+.||+|+||.||+|..+ +++.||+|.+.... .....+.+.+|+.++++++||||+++++++.+++..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM 80 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence 36889999999999999999765 68999999986543 2233456889999999999999999999999999999999
Q ss_pred EecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCC
Q 011005 282 EYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHAD 361 (496)
Q Consensus 282 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 361 (496)
||+++|+|.+++.... .+++..+..++.|++.||+||| +++++||||||+||+++.++.+||+|||+++.....
T Consensus 81 e~~~~~~L~~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~ 154 (291)
T cd05612 81 EYVPGGELFSYLRNSG---RFSNSTGLFYASEIVCALEYLH---SKEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDR 154 (291)
T ss_pred eCCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHeEECCCCCEEEEecCcchhccCC
Confidence 9999999999987654 6888999999999999999999 789999999999999999999999999999866432
Q ss_pred CCCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHH
Q 011005 362 SSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVI 441 (496)
Q Consensus 362 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (496)
.....|++.|+|||++.+..++.++||||+||++|+|++|+.||.... .......+.......+..
T Consensus 155 ---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~-------~~~~~~~i~~~~~~~~~~---- 220 (291)
T cd05612 155 ---TWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDN-------PFGIYEKILAGKLEFPRH---- 220 (291)
T ss_pred ---cccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-------HHHHHHHHHhCCcCCCcc----
Confidence 223568999999999999999999999999999999999999986321 111222222222221111
Q ss_pred HHHHHHHHHHHhcccCCCCCCCC-----HHHHHHHHHHhc
Q 011005 442 RDILLISTVSFACLQSNPKSRPT-----MQSVSQEFLITR 476 (496)
Q Consensus 442 ~~~~~l~~li~~cl~~dP~~Rps-----~~evl~~~~~~~ 476 (496)
....+.+++.+||+.||.+||+ ++|+++|+|+..
T Consensus 221 -~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~ 259 (291)
T cd05612 221 -LDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNHRWFKS 259 (291)
T ss_pred -CCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcCccccC
Confidence 1224678999999999999995 999999999854
No 30
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-43 Score=331.05 Aligned_cols=263 Identities=25% Similarity=0.343 Sum_probs=207.5
Q ss_pred HHhCCCCcceeeecCCeeEEEEEe-CCCcEEEEEEcccchhH-------------HHHHHHHHHHHHHHhhccccccccc
Q 011005 203 ATEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSEEL-------------AFIKSFKNEAQVLSQVLHRNIVKLY 268 (496)
Q Consensus 203 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-------------~~~~~~~~e~~~l~~l~h~niv~~~ 268 (496)
..++|++.+.||+|.||.|-+|+. .+++.||||++.+..-. ...+...+|+.+|+++.|||||+++
T Consensus 95 ~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~Li 174 (576)
T KOG0585|consen 95 QLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLI 174 (576)
T ss_pred ehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEE
Confidence 357899999999999999999965 47999999999764311 1234788999999999999999999
Q ss_pred ceeecCC--eEEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCC
Q 011005 269 GYCLHKK--CMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLE 346 (496)
Q Consensus 269 ~~~~~~~--~~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~ 346 (496)
++..++. .+|||+|||..|.+... ......++..++++++.+++.||+||| .+||+||||||+|+|++++|+
T Consensus 175 EvLDDP~s~~~YlVley~s~G~v~w~---p~d~~els~~~Ar~ylrDvv~GLEYLH---~QgiiHRDIKPsNLLl~~~g~ 248 (576)
T KOG0585|consen 175 EVLDDPESDKLYLVLEYCSKGEVKWC---PPDKPELSEQQARKYLRDVVLGLEYLH---YQGIIHRDIKPSNLLLSSDGT 248 (576)
T ss_pred EeecCcccCceEEEEEeccCCccccC---CCCcccccHHHHHHHHHHHHHHHHHHH---hcCeeccccchhheEEcCCCc
Confidence 9998754 69999999998876522 222324899999999999999999999 779999999999999999999
Q ss_pred eEEccccccccccCCC-----CCccccccccccccccccccCC----cCcccchhhHHHHHHHHHhCCCCCccccccCCC
Q 011005 347 AFVADFGTARLLHADS-----SNRTLLAGTYGYIAPELAYTMV----MTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSS 417 (496)
Q Consensus 347 ~kl~Dfg~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~----~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~ 417 (496)
+||+|||.+....... ......+|||.|+|||...++. .+.+.||||+||+||.|+.|+.||-.
T Consensus 249 VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~------- 321 (576)
T KOG0585|consen 249 VKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFD------- 321 (576)
T ss_pred EEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCccc-------
Confidence 9999999998663221 1223368999999999988743 24589999999999999999999852
Q ss_pred CCCcchhHhhhcCCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCCCC
Q 011005 418 SDPKIMLIDVLDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTPLV 481 (496)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~~~ 481 (496)
.........++...+..+... .....+.+|+.+||++||++|.+..+|..|+|..+.-...
T Consensus 322 ~~~~~l~~KIvn~pL~fP~~p---e~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~~g~~~ 382 (576)
T KOG0585|consen 322 DFELELFDKIVNDPLEFPENP---EINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVTRDGDSP 382 (576)
T ss_pred chHHHHHHHHhcCcccCCCcc---cccHHHHHHHHHHhhcChhheeehhhheecceeccCCCCC
Confidence 112222333344433333222 1223477999999999999999999999999999874443
No 31
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=4.2e-43 Score=341.49 Aligned_cols=248 Identities=21% Similarity=0.300 Sum_probs=203.2
Q ss_pred ceeeecCCeeEEEEEe-CCCcEEEEEEcccch--hHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEecCCC
Q 011005 211 YCIGTGGYGSVYKAQL-PNGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEYMERG 287 (496)
Q Consensus 211 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~~~~g 287 (496)
+.||+|+||.||+|.. .+|+.||+|.+.... .......+.+|+.++++++||||+++++++..++..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~ 80 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence 3699999999999965 478999999987643 2233456788999999999999999999999999999999999999
Q ss_pred ChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCCCccc
Q 011005 288 SLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTL 367 (496)
Q Consensus 288 ~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 367 (496)
+|.+++.... .+++..+..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++...........
T Consensus 81 ~L~~~l~~~~---~~~~~~~~~~~~qi~~~L~~lH---~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~ 154 (323)
T cd05571 81 ELFFHLSRER---VFSEDRARFYGAEIVSALGYLH---SCDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGATMKT 154 (323)
T ss_pred cHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---hCCeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCCCcccc
Confidence 9999987654 6889999999999999999999 789999999999999999999999999999764333333445
Q ss_pred cccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHHHHHHHH
Q 011005 368 LAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVIRDILLI 447 (496)
Q Consensus 368 ~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 447 (496)
.+||+.|+|||++.+..++.++||||+||++|||++|+.||.... ...............+. .....+
T Consensus 155 ~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~-------~~~~~~~~~~~~~~~p~-----~~~~~~ 222 (323)
T cd05571 155 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD-------HEKLFELILMEEIRFPR-----TLSPEA 222 (323)
T ss_pred eecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCC-------HHHHHHHHHcCCCCCCC-----CCCHHH
Confidence 679999999999999999999999999999999999999985321 11112222222221111 112246
Q ss_pred HHHHHhcccCCCCCCC-----CHHHHHHHHHHhc
Q 011005 448 STVSFACLQSNPKSRP-----TMQSVSQEFLITR 476 (496)
Q Consensus 448 ~~li~~cl~~dP~~Rp-----s~~evl~~~~~~~ 476 (496)
.+++.+||+.||++|| ++.++++|+|+..
T Consensus 223 ~~li~~~L~~dP~~R~~~~~~~~~~ll~h~~f~~ 256 (323)
T cd05571 223 KSLLAGLLKKDPKQRLGGGPEDAKEIMEHRFFAS 256 (323)
T ss_pred HHHHHHHccCCHHHcCCCCCCCHHHHHcCCCcCC
Confidence 7899999999999999 8999999999865
No 32
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=6.6e-43 Score=337.31 Aligned_cols=269 Identities=22% Similarity=0.303 Sum_probs=204.2
Q ss_pred HhCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEE
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYE 282 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e 282 (496)
.++|++.+.||+|+||+||+|..+ +++.||+|.+...........+.+|+.+++.++||||+++++++..+...++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 83 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFE 83 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEE
Confidence 367999999999999999999765 6889999998765433333456789999999999999999999999999999999
Q ss_pred ecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCC
Q 011005 283 YMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADS 362 (496)
Q Consensus 283 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 362 (496)
|+. ++|.+++.... ..++...+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++.......
T Consensus 84 ~~~-~~l~~~~~~~~--~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~ 157 (303)
T cd07869 84 YVH-TDLCQYMDKHP--GGLHPENVKLFLFQLLRGLSYIH---QRYILHRDLKPQNLLISDTGELKLADFGLARAKSVPS 157 (303)
T ss_pred CCC-cCHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEECCCCcceeccCCC
Confidence 996 57877776542 25788999999999999999999 7899999999999999999999999999997654333
Q ss_pred CCcccccccccccccccccc-CCcCcccchhhHHHHHHHHHhCCCCCccccccCC----------CCCCcch--hH---h
Q 011005 363 SNRTLLAGTYGYIAPELAYT-MVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSS----------SSDPKIM--LI---D 426 (496)
Q Consensus 363 ~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~----------~~~~~~~--~~---~ 426 (496)
.......+++.|+|||++.+ ..++.++||||+||++|+|++|+.||........ ....... .. .
T Consensus 158 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (303)
T cd07869 158 HTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPH 237 (303)
T ss_pred ccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhccc
Confidence 33344568999999999865 4578899999999999999999999964321100 0000000 00 0
Q ss_pred hhcCCCC--CCCC--hhHH--HHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccC
Q 011005 427 VLDQRLP--PPVD--RKVI--RDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKT 478 (496)
Q Consensus 427 ~~~~~~~--~~~~--~~~~--~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~ 478 (496)
....... .+.. .... .....+.+++.+||+.||++|||+.|+++|+|+..-.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h~~f~~~~ 295 (303)
T cd07869 238 FKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSHEYFSDLP 295 (303)
T ss_pred cccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcCcccccCC
Confidence 0000000 0000 0000 0012467899999999999999999999999997643
No 33
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=6.4e-43 Score=334.29 Aligned_cols=257 Identities=23% Similarity=0.278 Sum_probs=203.7
Q ss_pred CCCcceeeecCCeeEEEEEe-CCCcEEEEEEcccchh--HHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEe
Q 011005 207 FDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSEE--LAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEY 283 (496)
Q Consensus 207 ~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~ 283 (496)
|+..+.||+|+||.||+|.. .+++.||+|.+..... ......+.+|+.++++++|++|+++++++.+.+..++||||
T Consensus 2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05631 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEEe
Confidence 67788999999999999975 5789999999865431 22234578899999999999999999999999999999999
Q ss_pred cCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCC
Q 011005 284 MERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSS 363 (496)
Q Consensus 284 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 363 (496)
+++|+|..++.... ...+++..+..++.|++.||+||| +.+|+||||||+||++++++.++|+|||++.......
T Consensus 82 ~~~g~L~~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH---~~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~- 156 (285)
T cd05631 82 MNGGDLKFHIYNMG-NPGFDEQRAIFYAAELCCGLEDLQ---RERIVYRDLKPENILLDDRGHIRISDLGLAVQIPEGE- 156 (285)
T ss_pred cCCCcHHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCC-
Confidence 99999988876432 225889999999999999999999 7899999999999999999999999999998753322
Q ss_pred CccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHHHH
Q 011005 364 NRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVIRD 443 (496)
Q Consensus 364 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 443 (496)
......|++.|+|||++.+..++.++||||+||++|+|++|+.||...... ............. ...... ..
T Consensus 157 ~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~----~~~~~~~~~~~~~-~~~~~~---~~ 228 (285)
T cd05631 157 TVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKER----VKREEVDRRVKED-QEEYSE---KF 228 (285)
T ss_pred eecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcc----hhHHHHHHHhhcc-cccCCc---cC
Confidence 223456899999999999999999999999999999999999999732210 0001111111110 000111 11
Q ss_pred HHHHHHHHHhcccCCCCCCCC-----HHHHHHHHHHhc
Q 011005 444 ILLISTVSFACLQSNPKSRPT-----MQSVSQEFLITR 476 (496)
Q Consensus 444 ~~~l~~li~~cl~~dP~~Rps-----~~evl~~~~~~~ 476 (496)
...+.+|+.+||+.||++||+ ++++++|+|+..
T Consensus 229 s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h~~~~~ 266 (285)
T cd05631 229 SEDAKSICRMLLTKNPKERLGCRGNGAAGVKQHPIFKN 266 (285)
T ss_pred CHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcCHhhcC
Confidence 224678999999999999997 899999999855
No 34
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=1.3e-43 Score=318.51 Aligned_cols=280 Identities=23% Similarity=0.257 Sum_probs=215.8
Q ss_pred HhCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchhH-HHHHHHHHHHHHHHhhcccccccccceeec--CCeEEE
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEEL-AFIKSFKNEAQVLSQVLHRNIVKLYGYCLH--KKCMFL 279 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~--~~~~~l 279 (496)
.++|+..+.|++|+||.||+|+++ +++.||+|+++..... ..--...+|+.++.+.+|||||.+-.+..- -+..||
T Consensus 75 v~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~ 154 (419)
T KOG0663|consen 75 VEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYI 154 (419)
T ss_pred HHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeee
Confidence 466888999999999999999765 6889999999875432 222345899999999999999999887653 457999
Q ss_pred EEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEcccccccccc
Q 011005 280 IYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLH 359 (496)
Q Consensus 280 V~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 359 (496)
|||||+. +|..+++... ..|...++.-+..|+++|++||| ...|+||||||+|+|++..|.+||+|||+|+.+.
T Consensus 155 VMe~~Eh-DLksl~d~m~--q~F~~~evK~L~~QlL~glk~lH---~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~yg 228 (419)
T KOG0663|consen 155 VMEYVEH-DLKSLMETMK--QPFLPGEVKTLMLQLLRGLKHLH---DNWILHRDLKTSNLLLSHKGILKIADFGLAREYG 228 (419)
T ss_pred eHHHHHh-hHHHHHHhcc--CCCchHHHHHHHHHHHHHHHHHh---hceeEecccchhheeeccCCcEEecccchhhhhc
Confidence 9999987 8988888655 47889999999999999999999 7899999999999999999999999999999998
Q ss_pred CCCCCccccccccccccccccccC-CcCcccchhhHHHHHHHHHhCCCCCccccccC-------------CCCCCcchhH
Q 011005 360 ADSSNRTLLAGTYGYIAPELAYTM-VMTEKCDVYSFGVVTLEVLMGKHPRDILSSLS-------------SSSDPKIMLI 425 (496)
Q Consensus 360 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~el~~g~~p~~~~~~~~-------------~~~~~~~~~~ 425 (496)
.+....+..+-|.+|+|||.+.+. .|+++.|+||+|||+.||+++++-|...+... ....+.....
T Consensus 229 sp~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~l 308 (419)
T KOG0663|consen 229 SPLKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSEL 308 (419)
T ss_pred CCcccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCcccc
Confidence 887777888899999999998875 69999999999999999999999886443221 0000100000
Q ss_pred hhhc--CCCCCCCC---hhH--HHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCCCCCccccccc
Q 011005 426 DVLD--QRLPPPVD---RKV--IRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTPLVKHAAIQDI 489 (496)
Q Consensus 426 ~~~~--~~~~~~~~---~~~--~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~~~~~~~~~~i 489 (496)
.... .....++. ... ......-.+|+..+|..||.+|.|+.|.|+|-|+........+..+-.+
T Consensus 309 p~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h~~F~e~P~p~~P~~~Pt~ 379 (419)
T KOG0663|consen 309 PAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKHEYFRETPLPIDPSMFPTW 379 (419)
T ss_pred chhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhcccccccCCCCCChhhcCCC
Confidence 0000 00000000 000 0011234688899999999999999999999999886655555544443
No 35
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.5e-43 Score=355.67 Aligned_cols=257 Identities=26% Similarity=0.420 Sum_probs=210.6
Q ss_pred hCCCCcceeeecCCeeEEEEEeC------CCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEE
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLP------NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMF 278 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 278 (496)
.+....+.||+|+||+||+|+.. +...||||.++...+.+..++|.+|++++..++|||||+++|.|.+++.++
T Consensus 486 ~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~~ 565 (774)
T KOG1026|consen 486 SDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDPLC 565 (774)
T ss_pred hheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCeeE
Confidence 45556778999999999999643 456799999999888778899999999999999999999999999999999
Q ss_pred EEEEecCCCChhhhhhCCCC-----------CccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCe
Q 011005 279 LIYEYMERGSLFCNLHNNED-----------AVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEA 347 (496)
Q Consensus 279 lV~e~~~~g~L~~~l~~~~~-----------~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~ 347 (496)
||+|||..|+|.++|..... ...++..+.+.|+.|||.|++||. ++.+|||||.++|+||+++..|
T Consensus 566 MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs---~~~FVHRDLATRNCLVge~l~V 642 (774)
T KOG1026|consen 566 MVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLS---SHHFVHRDLATRNCLVGENLVV 642 (774)
T ss_pred EEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHH---hCcccccchhhhhceeccceEE
Confidence 99999999999999864321 223889999999999999999999 7789999999999999999999
Q ss_pred EEccccccccccCCCCCc--cccccccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccCCCCCCcchh
Q 011005 348 FVADFGTARLLHADSSNR--TLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSSDPKIML 424 (496)
Q Consensus 348 kl~Dfg~~~~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~~~~~~~ 424 (496)
||+|||+++..-..+... ....-..+|||||.+..+++|++||||||||+|||+++ |+.||..++ .++.+
T Consensus 643 KIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glS-------n~EVI 715 (774)
T KOG1026|consen 643 KISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLS-------NQEVI 715 (774)
T ss_pred EecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccc-------hHHHH
Confidence 999999998654332211 11223569999999999999999999999999999998 899986432 33344
Q ss_pred HhhhcCCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHh
Q 011005 425 IDVLDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLIT 475 (496)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~ 475 (496)
..+-..++-+- +...+.++..|+..||+..|.+||+++||-..+.-.
T Consensus 716 e~i~~g~lL~~----Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~ 762 (774)
T KOG1026|consen 716 ECIRAGQLLSC----PENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAW 762 (774)
T ss_pred HHHHcCCcccC----CCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHH
Confidence 44444443211 223455688999999999999999999997766443
No 36
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=1.4e-42 Score=340.42 Aligned_cols=259 Identities=25% Similarity=0.375 Sum_probs=202.0
Q ss_pred HhCCCCcceeeecCCeeEEEEEe------CCCcEEEEEEcccchhHHHHHHHHHHHHHHHhh-cccccccccceeecCC-
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQL------PNGKVFALKKLHTSEELAFIKSFKNEAQVLSQV-LHRNIVKLYGYCLHKK- 275 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~- 275 (496)
.++|++.+.||+|+||.||+|.+ ..++.||+|++.........+.+.+|+.+++.+ +||||+++++++...+
T Consensus 6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 85 (338)
T cd05102 6 RDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPNG 85 (338)
T ss_pred hhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCC
Confidence 46899999999999999999964 235689999997654444456789999999999 8999999999887644
Q ss_pred eEEEEEEecCCCChhhhhhCCCC---------------------------------------------------------
Q 011005 276 CMFLIYEYMERGSLFCNLHNNED--------------------------------------------------------- 298 (496)
Q Consensus 276 ~~~lV~e~~~~g~L~~~l~~~~~--------------------------------------------------------- 298 (496)
..++||||+++|+|.+++.....
T Consensus 86 ~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (338)
T cd05102 86 PLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDD 165 (338)
T ss_pred ceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhccc
Confidence 58899999999999998875321
Q ss_pred --CccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCC--Ccccccccccc
Q 011005 299 --AVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSS--NRTLLAGTYGY 374 (496)
Q Consensus 299 --~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y 374 (496)
...+++.++..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++....... ......+++.|
T Consensus 166 ~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y 242 (338)
T cd05102 166 LWKSPLTMEDLICYSFQVARGMEFLA---SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKW 242 (338)
T ss_pred cccCCCCHHHHHHHHHHHHHHHHHHH---HCCEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCccc
Confidence 124778889999999999999999 78999999999999999999999999999986543221 11223456789
Q ss_pred ccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHHHHHHHHHHHHHh
Q 011005 375 IAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVIRDILLISTVSFA 453 (496)
Q Consensus 375 ~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 453 (496)
+|||++.+..++.++||||||+++|||++ |..||..... ................. . .....+.+++.+
T Consensus 243 ~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~------~~~~~~~~~~~~~~~~~-~---~~~~~l~~li~~ 312 (338)
T cd05102 243 MAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQI------NEEFCQRLKDGTRMRAP-E---NATPEIYRIMLA 312 (338)
T ss_pred cCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCc------cHHHHHHHhcCCCCCCC-C---CCCHHHHHHHHH
Confidence 99999999999999999999999999997 9999864221 11111111111111111 1 112347789999
Q ss_pred cccCCCCCCCCHHHHHHHHHHh
Q 011005 454 CLQSNPKSRPTMQSVSQEFLIT 475 (496)
Q Consensus 454 cl~~dP~~Rps~~evl~~~~~~ 475 (496)
||+.||++|||+.|+++.+...
T Consensus 313 cl~~dp~~RPs~~el~~~l~~~ 334 (338)
T cd05102 313 CWQGDPKERPTFSALVEILGDL 334 (338)
T ss_pred HccCChhhCcCHHHHHHHHHHH
Confidence 9999999999999999987653
No 37
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-43 Score=323.08 Aligned_cols=279 Identities=24% Similarity=0.279 Sum_probs=216.7
Q ss_pred HHhCCCCcceeeecCCeeEEEEEe-CCCcEEEEEEcccc-hhHHHHHHHHHHHHHHHhhcccccccccceeec-----CC
Q 011005 203 ATEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTS-EELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLH-----KK 275 (496)
Q Consensus 203 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-----~~ 275 (496)
....|...+.||+|+||.|++|.. .+|+.||||++... ......++..+|++++++++|+||+.+.+.+.. -+
T Consensus 20 i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~ 99 (359)
T KOG0660|consen 20 IPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFN 99 (359)
T ss_pred ccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccc
Confidence 456677788999999999999965 47899999999843 233455778999999999999999999998865 34
Q ss_pred eEEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEcccccc
Q 011005 276 CMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTA 355 (496)
Q Consensus 276 ~~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~ 355 (496)
..|+|+|+|+ -+|...++.+. .++...+..+++|+++||.|+| +.+|+|||+||+|++++.+..+||+|||+|
T Consensus 100 DvYiV~elMe-tDL~~iik~~~---~L~d~H~q~f~YQiLrgLKyiH---SAnViHRDLKPsNll~n~~c~lKI~DFGLA 172 (359)
T KOG0660|consen 100 DVYLVFELME-TDLHQIIKSQQ---DLTDDHAQYFLYQILRGLKYIH---SANVIHRDLKPSNLLLNADCDLKICDFGLA 172 (359)
T ss_pred eeEEehhHHh-hHHHHHHHcCc---cccHHHHHHHHHHHHHhcchhh---cccccccccchhheeeccCCCEEeccccce
Confidence 6899999994 58888888764 5888999999999999999999 889999999999999999999999999999
Q ss_pred ccccCC--CCCccccccccccccccccc-cCCcCcccchhhHHHHHHHHHhCCCCCcccccc---------CCCCCCcch
Q 011005 356 RLLHAD--SSNRTLLAGTYGYIAPELAY-TMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSL---------SSSSDPKIM 423 (496)
Q Consensus 356 ~~~~~~--~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~---------~~~~~~~~~ 423 (496)
+..... ....+..+.|.+|+|||++. ...|+.+.||||.|||+.||++|++-|...... .+.. ....
T Consensus 173 R~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP-~~e~ 251 (359)
T KOG0660|consen 173 RYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTP-SEED 251 (359)
T ss_pred eeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCC-CHHH
Confidence 987543 22234567899999999865 568999999999999999999999998644322 0111 1111
Q ss_pred --------hHhhhcC---CCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCCCCCccccccc
Q 011005 424 --------LIDVLDQ---RLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTPLVKHAAIQDI 489 (496)
Q Consensus 424 --------~~~~~~~---~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~~~~~~~~~~i 489 (496)
....+.. ..+.+.............+|+++||..||.+|+|++|+++|+++.......+.+..+.+
T Consensus 252 l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~hPYl~~~hdp~dEP~~~~~ 328 (359)
T KOG0660|consen 252 LQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAHPYLAPYHDPEDEPVCQPI 328 (359)
T ss_pred HHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcChhhhhhcCCccCCCCCCC
Confidence 1111111 11111111112223456799999999999999999999999999988877777755544
No 38
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.6e-43 Score=342.62 Aligned_cols=254 Identities=22% Similarity=0.388 Sum_probs=214.0
Q ss_pred HHhCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccch--hHHHHHHHHHHHHHHHhhc-ccccccccceeecCCeEE
Q 011005 203 ATEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVL-HRNIVKLYGYCLHKKCMF 278 (496)
Q Consensus 203 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~ 278 (496)
..++|.+.+.||+|.||+|+++..+ +++.+|||.+++.. ..++.+..+.|..++...+ ||.+++++.+|+.+++++
T Consensus 366 ~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~ 445 (694)
T KOG0694|consen 366 TLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLF 445 (694)
T ss_pred cccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEE
Confidence 3467999999999999999999775 57899999999865 3345677888999988885 999999999999999999
Q ss_pred EEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccc
Q 011005 279 LIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLL 358 (496)
Q Consensus 279 lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 358 (496)
.||||+.||++..+.+.. .|++..+.-++..|+.||+||| .+||||||||.+|||+|.+|++||+|||+++..
T Consensus 446 fvmey~~Ggdm~~~~~~~----~F~e~rarfyaAev~l~L~fLH---~~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~ 518 (694)
T KOG0694|consen 446 FVMEYVAGGDLMHHIHTD----VFSEPRARFYAAEVVLGLQFLH---ENGIIYRDLKLDNLLLDTEGHVKIADFGLCKEG 518 (694)
T ss_pred EEEEecCCCcEEEEEecc----cccHHHHHHHHHHHHHHHHHHH---hcCceeeecchhheEEcccCcEEeccccccccc
Confidence 999999999955444432 7999999999999999999999 889999999999999999999999999999987
Q ss_pred cCCCCCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCCh
Q 011005 359 HADSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDR 438 (496)
Q Consensus 359 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (496)
...+...++.+|||.|||||++.+..|+.++|.|||||+||||+.|..||. ..++++....++......+..
T Consensus 519 m~~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~-------gddEee~FdsI~~d~~~yP~~- 590 (694)
T KOG0694|consen 519 MGQGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFP-------GDDEEEVFDSIVNDEVRYPRF- 590 (694)
T ss_pred CCCCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCC-------CCCHHHHHHHHhcCCCCCCCc-
Confidence 766677888999999999999999999999999999999999999999996 334444444444444333321
Q ss_pred hHHHHHHHHHHHHHhcccCCCCCCCCH-----HHHHHHHHHh
Q 011005 439 KVIRDILLISTVSFACLQSNPKSRPTM-----QSVSQEFLIT 475 (496)
Q Consensus 439 ~~~~~~~~l~~li~~cl~~dP~~Rps~-----~evl~~~~~~ 475 (496)
...+...++.++|.++|++|.-+ .+|.+|+|+.
T Consensus 591 ----ls~ea~~il~~ll~k~p~kRLG~~e~d~~~i~~hpFFr 628 (694)
T KOG0694|consen 591 ----LSKEAIAIMRRLLRKNPEKRLGSGERDAEDIKKHPFFR 628 (694)
T ss_pred ----ccHHHHHHHHHHhccCcccccCCCCCCchhhhhCCccc
Confidence 11235678889999999999954 6777776664
No 39
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=1.8e-42 Score=338.19 Aligned_cols=266 Identities=26% Similarity=0.363 Sum_probs=209.1
Q ss_pred HhCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEE
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYE 282 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e 282 (496)
.++|++.+.||+|+||.||++..+ ++..||+|.+...........+.+|++++++++||||+++++++..++..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 83 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 83 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEee
Confidence 367999999999999999999765 6888999998765444455678999999999999999999999999999999999
Q ss_pred ecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCC
Q 011005 283 YMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADS 362 (496)
Q Consensus 283 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 362 (496)
|+++|+|.+++.... .+++..+..++.|++.||.|||+ ..+|+||||||+||+++.++.++|+|||++......
T Consensus 84 ~~~~~~L~~~l~~~~---~~~~~~~~~~~~~i~~~l~~lH~--~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~- 157 (331)
T cd06649 84 HMDGGSLDQVLKEAK---RIPEEILGKVSIAVLRGLAYLRE--KHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS- 157 (331)
T ss_pred cCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHhh--cCCEEcCCCChhhEEEcCCCcEEEccCccccccccc-
Confidence 999999999997644 57889999999999999999994 246999999999999999999999999999765332
Q ss_pred CCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccC------CC-----C-------------
Q 011005 363 SNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLS------SS-----S------------- 418 (496)
Q Consensus 363 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~------~~-----~------------- 418 (496)
......|++.|+|||++.+..++.++|||||||++|||++|+.||....... .. .
T Consensus 158 -~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (331)
T cd06649 158 -MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSISPRPRPP 236 (331)
T ss_pred -ccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccccCCccccCcccccc
Confidence 2234568999999999999999999999999999999999999985321100 00 0
Q ss_pred -----------CCcchhHhhhc---CCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccC
Q 011005 419 -----------DPKIMLIDVLD---QRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKT 478 (496)
Q Consensus 419 -----------~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~ 478 (496)
.......+... ....+.... ......+.+|+.+||+.||++|||+.|+++|+|+....
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~~~~~~~ 308 (331)
T cd06649 237 GRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPN--GVFTPDFQEFVNKCLIKNPAERADLKMLMNHTFIKRSE 308 (331)
T ss_pred cccccccccccccchhHHHHHHHHHhCCCcCCCC--ccccHHHHHHHHHHccCCcccCCCHHHHhcChHHhhcc
Confidence 00000000000 000000000 01123578999999999999999999999999997643
No 40
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=7.6e-43 Score=340.43 Aligned_cols=251 Identities=25% Similarity=0.344 Sum_probs=207.9
Q ss_pred hCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccch--hHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEE
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIY 281 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~ 281 (496)
++|++.+.||+|+||.||+|.++ +++.||+|.+.... .....+.+.+|+.++++++||||+++++++..++..++||
T Consensus 18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 97 (329)
T PTZ00263 18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLL 97 (329)
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEE
Confidence 57899999999999999999765 68899999987643 2233456889999999999999999999999999999999
Q ss_pred EecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCC
Q 011005 282 EYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHAD 361 (496)
Q Consensus 282 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 361 (496)
||+++|+|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+++.....
T Consensus 98 e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~ 171 (329)
T PTZ00263 98 EFVVGGELFTHLRKAG---RFPNDVAKFYHAELVLAFEYLH---SKDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDR 171 (329)
T ss_pred cCCCCChHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHEEECCCCCEEEeeccCceEcCCC
Confidence 9999999999987653 6788999999999999999999 789999999999999999999999999999866432
Q ss_pred CCCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHH
Q 011005 362 SSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVI 441 (496)
Q Consensus 362 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (496)
.....||+.|+|||++.+..++.++|||||||++|+|++|+.||.... .......+.......+..
T Consensus 172 ---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~-------~~~~~~~i~~~~~~~p~~---- 237 (329)
T PTZ00263 172 ---TFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDT-------PFRIYEKILAGRLKFPNW---- 237 (329)
T ss_pred ---cceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCC-------HHHHHHHHhcCCcCCCCC----
Confidence 224578999999999999999999999999999999999999986321 111222222232221111
Q ss_pred HHHHHHHHHHHhcccCCCCCCCC-----HHHHHHHHHHhc
Q 011005 442 RDILLISTVSFACLQSNPKSRPT-----MQSVSQEFLITR 476 (496)
Q Consensus 442 ~~~~~l~~li~~cl~~dP~~Rps-----~~evl~~~~~~~ 476 (496)
....+.+++.+||+.||++||+ ++++++|+|+..
T Consensus 238 -~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~hp~f~~ 276 (329)
T PTZ00263 238 -FDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNHPYFHG 276 (329)
T ss_pred -CCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCccCC
Confidence 1124678999999999999997 799999999865
No 41
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=5.7e-43 Score=335.17 Aligned_cols=264 Identities=22% Similarity=0.263 Sum_probs=201.2
Q ss_pred hCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEe
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEY 283 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~ 283 (496)
++|++.+.||+|+||+||+|..+ +++.||+|.++..........+.+|+.++++++||||+++++++......++||||
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 84 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEY 84 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeC
Confidence 56899999999999999999764 68899999987543333335677999999999999999999999999999999999
Q ss_pred cCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCC
Q 011005 284 MERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSS 363 (496)
Q Consensus 284 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 363 (496)
+++ +|.+++.... ..+++..+..++.||+.||+||| +++|+||||||+||+++.++.+||+|||+++.......
T Consensus 85 ~~~-~l~~~l~~~~--~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~~ 158 (288)
T cd07871 85 LDS-DLKQYLDNCG--NLMSMHNVKIFMFQLLRGLSYCH---KRKILHRDLKPQNLLINEKGELKLADFGLARAKSVPTK 158 (288)
T ss_pred CCc-CHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEECCCCCEEECcCcceeeccCCCc
Confidence 975 8988886543 24788999999999999999999 78999999999999999999999999999976543333
Q ss_pred Ccccccccccccccccccc-CCcCcccchhhHHHHHHHHHhCCCCCccccccC---------CCCC----Ccch-hHhhh
Q 011005 364 NRTLLAGTYGYIAPELAYT-MVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLS---------SSSD----PKIM-LIDVL 428 (496)
Q Consensus 364 ~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~---------~~~~----~~~~-~~~~~ 428 (496)
......+++.|+|||.+.+ ..++.++||||+|+++|+|++|+.||....... .... +... ..+..
T Consensus 159 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (288)
T cd07871 159 TYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEFR 238 (288)
T ss_pred cccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchhhh
Confidence 3344568899999998875 568899999999999999999999986322100 0000 0000 00000
Q ss_pred cCCCCCCCChhH----HHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHH
Q 011005 429 DQRLPPPVDRKV----IRDILLISTVSFACLQSNPKSRPTMQSVSQEFLI 474 (496)
Q Consensus 429 ~~~~~~~~~~~~----~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~ 474 (496)
....+....... ........+|+.+||+.||.+|||++|+++|+|+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~hp~f 288 (288)
T cd07871 239 SYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRHSYF 288 (288)
T ss_pred ccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcCCCC
Confidence 000000000000 0112346789999999999999999999999985
No 42
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=1.1e-42 Score=340.10 Aligned_cols=256 Identities=22% Similarity=0.301 Sum_probs=207.9
Q ss_pred hCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccch--hHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEE
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIY 281 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~ 281 (496)
++|++.+.||+|+||.||+|... +++.||+|++.... .......+.+|+++++.++||||+++++++..++..++||
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~ 80 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM 80 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence 36889999999999999999765 58899999997643 2234466889999999999999999999999999999999
Q ss_pred EecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCC
Q 011005 282 EYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHAD 361 (496)
Q Consensus 282 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 361 (496)
||+++|+|.+++.... .+++..+..++.|++.||.||| ..+++||||||+||+++.++.+||+|||++.....
T Consensus 81 e~~~g~~L~~~l~~~~---~l~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~- 153 (333)
T cd05600 81 EYVPGGDFRTLLNNLG---VLSEDHARFYMAEMFEAVDALH---ELGYIHRDLKPENFLIDASGHIKLTDFGLSKGIVT- 153 (333)
T ss_pred eCCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEECCCCCEEEEeCcCCccccc-
Confidence 9999999999997644 6788999999999999999999 78999999999999999999999999999976543
Q ss_pred CCCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhc--CCCCCC-CCh
Q 011005 362 SSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLD--QRLPPP-VDR 438 (496)
Q Consensus 362 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~ 438 (496)
......||+.|+|||++.+..++.++||||+||++|||++|+.||..... ......... .....+ ...
T Consensus 154 --~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~-------~~~~~~i~~~~~~~~~~~~~~ 224 (333)
T cd05600 154 --YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTP-------NETWENLKYWKETLQRPVYDD 224 (333)
T ss_pred --ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCH-------HHHHHHHHhccccccCCCCCc
Confidence 23345789999999999999999999999999999999999999963221 111111111 111111 100
Q ss_pred hHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhc
Q 011005 439 KVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITR 476 (496)
Q Consensus 439 ~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~ 476 (496)
........+.+++.+||..+|++||+++|+++|+|+..
T Consensus 225 ~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h~~~~~ 262 (333)
T cd05600 225 PRFNLSDEAWDLITKLINDPSRRFGSLEDIKNHPFFKE 262 (333)
T ss_pred cccccCHHHHHHHHHHhhChhhhcCCHHHHHhCcccCC
Confidence 00112235678999999999999999999999999875
No 43
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=1.5e-42 Score=341.84 Aligned_cols=258 Identities=28% Similarity=0.388 Sum_probs=202.2
Q ss_pred hCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEe
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEY 283 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~ 283 (496)
++|+..+.||+|+||.||+|.+. +++.||+|.+...........+.+|+++++.++|+||+++++++...+..++||||
T Consensus 74 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 153 (353)
T PLN00034 74 SELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEF 153 (353)
T ss_pred HHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEec
Confidence 44667788999999999999764 68999999997655445557789999999999999999999999999999999999
Q ss_pred cCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCC
Q 011005 284 MERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSS 363 (496)
Q Consensus 284 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 363 (496)
+++|+|.... ..+...+..++.||+.||+||| +.+|+||||||+|||+++++.+||+|||+++.......
T Consensus 154 ~~~~~L~~~~-------~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~~ 223 (353)
T PLN00034 154 MDGGSLEGTH-------IADEQFLADVARQILSGIAYLH---RRHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMD 223 (353)
T ss_pred CCCCcccccc-------cCCHHHHHHHHHHHHHHHHHHH---HCCEeecCCCHHHEEEcCCCCEEEcccccceecccccc
Confidence 9999986432 3456777889999999999999 78999999999999999999999999999987654333
Q ss_pred Ccccccccccccccccccc-----CCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCCh
Q 011005 364 NRTLLAGTYGYIAPELAYT-----MVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDR 438 (496)
Q Consensus 364 ~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (496)
......||..|+|||++.. ...+.++|||||||++|||++|+.||..... ...................
T Consensus 224 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~-----~~~~~~~~~~~~~~~~~~~- 297 (353)
T PLN00034 224 PCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQ-----GDWASLMCAICMSQPPEAP- 297 (353)
T ss_pred cccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCC-----ccHHHHHHHHhccCCCCCC-
Confidence 3344678999999998753 2334689999999999999999999962111 0001111111111111111
Q ss_pred hHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCCC
Q 011005 439 KVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTPL 480 (496)
Q Consensus 439 ~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~~ 480 (496)
......+.+++.+||+.||++|||+.|+++|+|+.+..+.
T Consensus 298 --~~~~~~l~~li~~~l~~~P~~Rpt~~ell~hp~~~~~~~~ 337 (353)
T PLN00034 298 --ATASREFRHFISCCLQREPAKRWSAMQLLQHPFILRAQPG 337 (353)
T ss_pred --CccCHHHHHHHHHHccCChhhCcCHHHHhcCcccccCCcc
Confidence 1122347899999999999999999999999999887554
No 44
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=1.3e-42 Score=339.48 Aligned_cols=252 Identities=24% Similarity=0.336 Sum_probs=207.2
Q ss_pred HhCCCCcceeeecCCeeEEEEEeCC--CcEEEEEEcccch--hHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEE
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLPN--GKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFL 279 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~~--~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 279 (496)
.++|++.+.||+|+||.||+|.+++ +..||+|.+.... .....+.+.+|+.+++.++||||+++++++..++..++
T Consensus 29 ~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~l 108 (340)
T PTZ00426 29 YEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYL 108 (340)
T ss_pred hhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEE
Confidence 3579999999999999999997543 3689999986543 22334567899999999999999999999999999999
Q ss_pred EEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEcccccccccc
Q 011005 280 IYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLH 359 (496)
Q Consensus 280 V~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 359 (496)
||||+++|+|.+++.... .+++..+..++.|++.||.||| +.+|+||||||+|||++.++.+||+|||+++...
T Consensus 109 v~Ey~~~g~L~~~i~~~~---~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~ 182 (340)
T PTZ00426 109 VLEFVIGGEFFTFLRRNK---RFPNDVGCFYAAQIVLIFEYLQ---SLNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVD 182 (340)
T ss_pred EEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---HCCeEccCCCHHHEEECCCCCEEEecCCCCeecC
Confidence 999999999999997654 6889999999999999999999 7899999999999999999999999999998654
Q ss_pred CCCCCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChh
Q 011005 360 ADSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRK 439 (496)
Q Consensus 360 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 439 (496)
.. .....||+.|+|||++.+..++.++||||+||++|||++|+.||.... .......+.......+..
T Consensus 183 ~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~-------~~~~~~~i~~~~~~~p~~-- 250 (340)
T PTZ00426 183 TR---TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANE-------PLLIYQKILEGIIYFPKF-- 250 (340)
T ss_pred CC---cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCC-------HHHHHHHHhcCCCCCCCC--
Confidence 32 234578999999999999899999999999999999999999996321 122222333332221111
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCC-----CHHHHHHHHHHhc
Q 011005 440 VIRDILLISTVSFACLQSNPKSRP-----TMQSVSQEFLITR 476 (496)
Q Consensus 440 ~~~~~~~l~~li~~cl~~dP~~Rp-----s~~evl~~~~~~~ 476 (496)
....+.+++.+||+.||++|+ +++|+++|+|+..
T Consensus 251 ---~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~hp~f~~ 289 (340)
T PTZ00426 251 ---LDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEHPWFGN 289 (340)
T ss_pred ---CCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcCCCcCC
Confidence 112367899999999999995 8999999999865
No 45
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=1.9e-42 Score=335.25 Aligned_cols=247 Identities=25% Similarity=0.342 Sum_probs=202.1
Q ss_pred eeecCCeeEEEEEeC-CCcEEEEEEcccch--hHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEecCCCCh
Q 011005 213 IGTGGYGSVYKAQLP-NGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEYMERGSL 289 (496)
Q Consensus 213 lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~~~~g~L 289 (496)
||+|+||.||+|... +++.||+|.+.... .......+.+|+.++++++||||+++++++..++..++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 699999999999765 58899999987542 223446678899999999999999999999999999999999999999
Q ss_pred hhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCCCccccc
Q 011005 290 FCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLA 369 (496)
Q Consensus 290 ~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 369 (496)
.+++.... .+++..+..++.|++.||.||| +.+|+||||||+||+++.++.++|+|||+++.............
T Consensus 81 ~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH---~~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 154 (312)
T cd05585 81 FHHLQREG---RFDLSRARFYTAELLCALENLH---KFNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDDKTNTFC 154 (312)
T ss_pred HHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---hCCeEeCCCCHHHeEECCCCcEEEEECcccccCccCCCcccccc
Confidence 99997643 6899999999999999999999 78999999999999999999999999999976543333344567
Q ss_pred cccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHHHHHHHHHH
Q 011005 370 GTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVIRDILLIST 449 (496)
Q Consensus 370 gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 449 (496)
||+.|+|||++.+..++.++||||+||++|+|++|+.||.... ...............+. .....+.+
T Consensus 155 gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~-------~~~~~~~~~~~~~~~~~-----~~~~~~~~ 222 (312)
T cd05585 155 GTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDEN-------VNEMYRKILQEPLRFPD-----GFDRDAKD 222 (312)
T ss_pred CCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCC-------HHHHHHHHHcCCCCCCC-----cCCHHHHH
Confidence 9999999999999999999999999999999999999996321 11222222222221111 11234678
Q ss_pred HHHhcccCCCCCCC---CHHHHHHHHHHhcc
Q 011005 450 VSFACLQSNPKSRP---TMQSVSQEFLITRK 477 (496)
Q Consensus 450 li~~cl~~dP~~Rp---s~~evl~~~~~~~~ 477 (496)
++.+||+.||++|| ++.|+++|+|+...
T Consensus 223 li~~~L~~dp~~R~~~~~~~e~l~hp~~~~~ 253 (312)
T cd05585 223 LLIGLLSRDPTRRLGYNGAQEIKNHPFFSQL 253 (312)
T ss_pred HHHHHcCCCHHHcCCCCCHHHHHcCCCcCCC
Confidence 99999999999997 57999999998753
No 46
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=4.1e-43 Score=335.37 Aligned_cols=259 Identities=22% Similarity=0.363 Sum_probs=220.8
Q ss_pred hCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccch-hHHHHHHHHHHHHHHHhhcccccccccceeecCCe-EEEEE
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSE-ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKC-MFLIY 281 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~-~~lV~ 281 (496)
++|...+.+|+|+||.++.++++ +++.+|+|++.-.. .....+....|+.++++++|||||.+.+.|.+++. .+|||
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm 83 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVM 83 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEE
Confidence 56888999999999999999765 57889999987654 22334577899999999999999999999999988 99999
Q ss_pred EecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCC
Q 011005 282 EYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHAD 361 (496)
Q Consensus 282 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 361 (496)
+||+||++.+.+.+.. +..++++.+..++.|++.|++||| +..|+|||||+.|||++.++.|+|+|||+|+.+..+
T Consensus 84 ~Y~eGg~l~~~i~~~k-~~~f~E~~i~~~~~Q~~~av~ylH---~~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~ 159 (426)
T KOG0589|consen 84 EYCEGGDLAQLIKEQK-GVLFPEERILKWFVQILLAVNYLH---ENRVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPE 159 (426)
T ss_pred eecCCCCHHHHHHHHh-hccccHHHHHHHHHHHHHHHHHHH---hhhhhcccchhhhhhccccCceeecchhhhhhcCCc
Confidence 9999999999998765 557999999999999999999999 779999999999999999999999999999999877
Q ss_pred CCCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHH
Q 011005 362 SSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVI 441 (496)
Q Consensus 362 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (496)
.....+.+|||.||+||++.+.+|..|+||||+||++|||++-+++|... +...-...+...... +...
T Consensus 160 ~~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~-------~m~~Li~ki~~~~~~-Plp~--- 228 (426)
T KOG0589|consen 160 DSLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKAS-------NMSELILKINRGLYS-PLPS--- 228 (426)
T ss_pred hhhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCcc-------chHHHHHHHhhccCC-CCCc---
Confidence 65677789999999999999999999999999999999999999999732 233333344433322 2222
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccC
Q 011005 442 RDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKT 478 (496)
Q Consensus 442 ~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~ 478 (496)
.....+..++..|++.+|+.||++.++|.++...+..
T Consensus 229 ~ys~el~~lv~~~l~~~P~~RPsa~~LL~~P~l~~~~ 265 (426)
T KOG0589|consen 229 MYSSELRSLVKSMLRKNPEHRPSALELLRRPHLLRYL 265 (426)
T ss_pred cccHHHHHHHHHHhhcCCccCCCHHHHhhChhhhhHH
Confidence 2333577899999999999999999999998777655
No 47
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=3.2e-42 Score=335.14 Aligned_cols=248 Identities=22% Similarity=0.301 Sum_probs=202.4
Q ss_pred ceeeecCCeeEEEEEe-CCCcEEEEEEcccch--hHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEecCCC
Q 011005 211 YCIGTGGYGSVYKAQL-PNGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEYMERG 287 (496)
Q Consensus 211 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~~~~g 287 (496)
+.||+|+||.||++.. .+|+.||+|.+.... .......+.+|+.+++.++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence 3699999999999975 468999999987643 2233456778999999999999999999999999999999999999
Q ss_pred ChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCCCccc
Q 011005 288 SLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTL 367 (496)
Q Consensus 288 ~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 367 (496)
+|..++.... .+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||++............
T Consensus 81 ~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~ 154 (323)
T cd05595 81 ELFFHLSRER---VFTEERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT 154 (323)
T ss_pred cHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHEEEcCCCCEEecccHHhccccCCCCcccc
Confidence 9998887654 6899999999999999999999 789999999999999999999999999998764333333344
Q ss_pred cccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHHHHHHHH
Q 011005 368 LAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVIRDILLI 447 (496)
Q Consensus 368 ~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 447 (496)
..||+.|+|||++.+..++.++|||||||++|||++|+.||.... ...............+.. ....+
T Consensus 155 ~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~-------~~~~~~~~~~~~~~~p~~-----~~~~~ 222 (323)
T cd05595 155 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD-------HERLFELILMEEIRFPRT-----LSPEA 222 (323)
T ss_pred ccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCC-------HHHHHHHHhcCCCCCCCC-----CCHHH
Confidence 679999999999999999999999999999999999999986321 111222222222211111 12246
Q ss_pred HHHHHhcccCCCCCCC-----CHHHHHHHHHHhc
Q 011005 448 STVSFACLQSNPKSRP-----TMQSVSQEFLITR 476 (496)
Q Consensus 448 ~~li~~cl~~dP~~Rp-----s~~evl~~~~~~~ 476 (496)
.+++.+||+.||++|| ++.++++|.|+..
T Consensus 223 ~~li~~~L~~dP~~R~~~~~~~~~~~l~h~~~~~ 256 (323)
T cd05595 223 KSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLS 256 (323)
T ss_pred HHHHHHHccCCHHHhCCCCCCCHHHHHcCCCcCC
Confidence 7899999999999998 8999999998865
No 48
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=5.4e-42 Score=334.88 Aligned_cols=266 Identities=25% Similarity=0.362 Sum_probs=208.1
Q ss_pred HhCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEE
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYE 282 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e 282 (496)
.++|++.+.||+|+||.||+|.++ ++..+|+|.+...........+.+|+++++.++|+||+++++++..++..++|||
T Consensus 4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 83 (333)
T cd06650 4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 83 (333)
T ss_pred hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEe
Confidence 468999999999999999999765 6888999988765444445678999999999999999999999999999999999
Q ss_pred ecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCC
Q 011005 283 YMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADS 362 (496)
Q Consensus 283 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 362 (496)
|+++|+|.+++.... .+++..+..++.|++.||.|||+ ..+++|+||||+||+++.++.+||+|||++......
T Consensus 84 ~~~~~~L~~~l~~~~---~~~~~~~~~~~~~l~~~l~~lH~--~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~- 157 (333)
T cd06650 84 HMDGGSLDQVLKKAG---RIPEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS- 157 (333)
T ss_pred cCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHh--cCCEEecCCChhhEEEcCCCCEEEeeCCcchhhhhh-
Confidence 999999999997643 57888999999999999999994 247999999999999999999999999999765332
Q ss_pred CCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccC----------CCCC-------------
Q 011005 363 SNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLS----------SSSD------------- 419 (496)
Q Consensus 363 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~----------~~~~------------- 419 (496)
......|+..|+|||++.+..++.++||||+||++|+|++|+.||....... ....
T Consensus 158 -~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (333)
T cd06650 158 -MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPRPRPPGR 236 (333)
T ss_pred -ccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccCcccCCccc
Confidence 2233568899999999999899999999999999999999999986322100 0000
Q ss_pred ----------CcchhHhhhc---CCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccC
Q 011005 420 ----------PKIMLIDVLD---QRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKT 478 (496)
Q Consensus 420 ----------~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~ 478 (496)
+......... ....+.... ......+.+|+.+||+.||++|||+.|+++|+|+....
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h~~~~~~~ 306 (333)
T cd06650 237 PLSSYGPDSRPPMAIFELLDYIVNEPPPKLPS--GVFGAEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSE 306 (333)
T ss_pred hhhhhcccccccccHHHHHHHHhcCCCccCCC--CCcCHHHHHHHHHhccCCcccCcCHHHHhhCHHHhcCc
Confidence 0000000000 000000000 00123477999999999999999999999999997653
No 49
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=3.7e-42 Score=335.26 Aligned_cols=248 Identities=22% Similarity=0.301 Sum_probs=201.7
Q ss_pred ceeeecCCeeEEEEEeC-CCcEEEEEEcccch--hHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEecCCC
Q 011005 211 YCIGTGGYGSVYKAQLP-NGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEYMERG 287 (496)
Q Consensus 211 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~~~~g 287 (496)
+.||+|+||.||++..+ +++.||+|++.... .......+.+|+.+++.++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g 80 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG 80 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence 36999999999999754 68999999997643 2234466788999999999999999999999999999999999999
Q ss_pred ChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCCCccc
Q 011005 288 SLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTL 367 (496)
Q Consensus 288 ~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 367 (496)
+|..++.... .+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+++...........
T Consensus 81 ~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~ 154 (328)
T cd05593 81 ELFFHLSRER---VFSEDRTRFYGAEIVSALDYLH---SGKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAATMKT 154 (328)
T ss_pred CHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---hCCeEecccCHHHeEECCCCcEEEecCcCCccCCCccccccc
Confidence 9998887643 6889999999999999999999 789999999999999999999999999998764333333344
Q ss_pred cccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHHHHHHHH
Q 011005 368 LAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVIRDILLI 447 (496)
Q Consensus 368 ~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 447 (496)
.+||+.|+|||++.+..++.++||||+||++|+|++|+.||.... ...............+. .....+
T Consensus 155 ~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~-------~~~~~~~~~~~~~~~p~-----~~~~~~ 222 (328)
T cd05593 155 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD-------HEKLFELILMEDIKFPR-----TLSADA 222 (328)
T ss_pred ccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCC-------HHHHHHHhccCCccCCC-----CCCHHH
Confidence 679999999999999999999999999999999999999996321 11111111111111111 112246
Q ss_pred HHHHHhcccCCCCCCC-----CHHHHHHHHHHhc
Q 011005 448 STVSFACLQSNPKSRP-----TMQSVSQEFLITR 476 (496)
Q Consensus 448 ~~li~~cl~~dP~~Rp-----s~~evl~~~~~~~ 476 (496)
.+++.+||+.||++|| ++.|+++|+|+..
T Consensus 223 ~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~ 256 (328)
T cd05593 223 KSLLSGLLIKDPNKRLGGGPDDAKEIMRHSFFTG 256 (328)
T ss_pred HHHHHHHcCCCHHHcCCCCCCCHHHHhcCCCcCC
Confidence 7899999999999997 8999999998754
No 50
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=2.1e-42 Score=331.28 Aligned_cols=264 Identities=23% Similarity=0.273 Sum_probs=202.3
Q ss_pred hCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccch-hHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEE
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSE-ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYE 282 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e 282 (496)
++|++.+.||+|+||+||+|.++ +++.||+|++.... .....+.+.+|+.+++.++||||+++++++...+..++|||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFE 80 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEe
Confidence 46899999999999999999775 68899999987643 22334567899999999999999999999999999999999
Q ss_pred ecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCC
Q 011005 283 YMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADS 362 (496)
Q Consensus 283 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 362 (496)
|++++.+..+.... ..+++..+..++.|++.||.||| ..+++||||||+||+++.++.+||+|||++.......
T Consensus 81 ~~~~~~l~~~~~~~---~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~ 154 (287)
T cd07848 81 YVEKNMLELLEEMP---NGVPPEKVRSYIYQLIKAIHWCH---KNDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGS 154 (287)
T ss_pred cCCCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCcEEEeeccCcccccccc
Confidence 99987776554322 26889999999999999999999 7899999999999999999999999999998764322
Q ss_pred C-CccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCC--------CCCCcchhHhhh-----
Q 011005 363 S-NRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSS--------SSDPKIMLIDVL----- 428 (496)
Q Consensus 363 ~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~--------~~~~~~~~~~~~----- 428 (496)
. ......|++.|+|||++.+..++.++||||+||++|||++|+.||........ ...+........
T Consensus 155 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (287)
T cd07848 155 NANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRF 234 (287)
T ss_pred cccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchh
Confidence 2 22335689999999999998999999999999999999999999964321100 000000000000
Q ss_pred -cCCCCCCCC-hh-----HHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHH
Q 011005 429 -DQRLPPPVD-RK-----VIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLI 474 (496)
Q Consensus 429 -~~~~~~~~~-~~-----~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~ 474 (496)
....+.... .. .......+.+++.+||+.||++|||++|+++|+|+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~hp~f 287 (287)
T cd07848 235 HGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNHPAF 287 (287)
T ss_pred cccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence 000000000 00 00112357899999999999999999999999985
No 51
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=3.7e-42 Score=337.54 Aligned_cols=274 Identities=25% Similarity=0.353 Sum_probs=204.9
Q ss_pred CCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccch-hHHHHHHHHHHHHHHHhhcccccccccceeecC-----CeEE
Q 011005 206 DFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSE-ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHK-----KCMF 278 (496)
Q Consensus 206 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~-----~~~~ 278 (496)
+|++.+.||+|+||.||+|..+ +++.||+|++.... .......+.+|+.++++++||||+++++++... ...+
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 80 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY 80 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence 5888999999999999999754 68999999987532 222345678999999999999999999988543 2579
Q ss_pred EEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccc
Q 011005 279 LIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLL 358 (496)
Q Consensus 279 lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 358 (496)
+||||+. ++|.+.+.... .+++..+..++.||+.||.||| +.+|+||||||+|||++.++.+||+|||+++..
T Consensus 81 lv~e~~~-~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~ 153 (338)
T cd07859 81 VVFELME-SDLHQVIKAND---DLTPEHHQFFLYQLLRALKYIH---TANVFHRDLKPKNILANADCKLKICDFGLARVA 153 (338)
T ss_pred EEEecCC-CCHHHHHHhcc---cCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCcEEEccCcccccc
Confidence 9999995 68888887543 6899999999999999999999 789999999999999999999999999999765
Q ss_pred cCCCC---Ccccccccccccccccccc--CCcCcccchhhHHHHHHHHHhCCCCCccccccCC--------CCCCcch--
Q 011005 359 HADSS---NRTLLAGTYGYIAPELAYT--MVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSS--------SSDPKIM-- 423 (496)
Q Consensus 359 ~~~~~---~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~--------~~~~~~~-- 423 (496)
..... ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||........ .......
T Consensus 154 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (338)
T cd07859 154 FNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETIS 233 (338)
T ss_pred ccccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHH
Confidence 33221 1233578999999999876 6788999999999999999999999964321000 0000000
Q ss_pred ---------hHhhhcCCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCCCCCcccc
Q 011005 424 ---------LIDVLDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTPLVKHAAI 486 (496)
Q Consensus 424 ---------~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~~~~~~~~ 486 (496)
....+....+.+...........+.+++.+||+.||++|||++|+++|+|+............
T Consensus 234 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~hp~f~~~~~~~~~~~~ 305 (338)
T cd07859 234 RVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYFKGLAKVEREPSA 305 (338)
T ss_pred HhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcCchhhhcCcccccccc
Confidence 000011111111111000112346789999999999999999999999999876665544433
No 52
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=4.5e-42 Score=333.44 Aligned_cols=263 Identities=24% Similarity=0.320 Sum_probs=220.3
Q ss_pred HHhCCCCcceeeecCCeeEEEEEeCC-CcEEEEEEcccchh--HHHHHHHHHHHHHHHhhc-ccccccccceeecCCeEE
Q 011005 203 ATEDFDIRYCIGTGGYGSVYKAQLPN-GKVFALKKLHTSEE--LAFIKSFKNEAQVLSQVL-HRNIVKLYGYCLHKKCMF 278 (496)
Q Consensus 203 ~~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~ 278 (496)
....|++.+.||+|.||.||++..+. |+.+|+|.+.+... ......+.+|+.+|+++. |||||.+++.++....++
T Consensus 33 ~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~ 112 (382)
T KOG0032|consen 33 IKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVY 112 (382)
T ss_pred ccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEE
Confidence 34678889999999999999997765 99999999977542 223467899999999998 999999999999999999
Q ss_pred EEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCC----CCeEEccccc
Q 011005 279 LIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSK----LEAFVADFGT 354 (496)
Q Consensus 279 lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~----~~~kl~Dfg~ 354 (496)
+|||+++||.|++.+... .+++..+..++.|++.++.||| +.||+|||+||+|+|+... +.+|++|||+
T Consensus 113 lvmEL~~GGeLfd~i~~~----~~sE~da~~~~~~il~av~~lH---~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGl 185 (382)
T KOG0032|consen 113 LVMELCEGGELFDRIVKK----HYSERDAAGIIRQILEAVKYLH---SLGVVHRDLKPENLLLASKDEGSGRIKLIDFGL 185 (382)
T ss_pred EEEEecCCchHHHHHHHc----cCCHHHHHHHHHHHHHHHHHHH---hCCceeccCCHHHeeeccccCCCCcEEEeeCCC
Confidence 999999999999999876 3899999999999999999999 7899999999999999644 4799999999
Q ss_pred cccccCCCCCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCC
Q 011005 355 ARLLHADSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPP 434 (496)
Q Consensus 355 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (496)
+..... .......+||+.|+|||++.+..|+..+||||+|+++|.|++|..||.... .......+.......
T Consensus 186 a~~~~~-~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~-------~~~~~~~i~~~~~~f 257 (382)
T KOG0032|consen 186 AKFIKP-GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGET-------EFEIFLAILRGDFDF 257 (382)
T ss_pred ceEccC-CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCC-------hhHHHHHHHcCCCCC
Confidence 998876 556677899999999999999999999999999999999999999997432 222333444443322
Q ss_pred CCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCCCC
Q 011005 435 PVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTPLV 481 (496)
Q Consensus 435 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~~~ 481 (496)
.. ..+........+++.+|+..||.+|+|+.++++|+|+.......
T Consensus 258 ~~-~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~HpWi~~~~~~~ 303 (382)
T KOG0032|consen 258 TS-EPWDDISESAKDFIRKLLEFDPRKRLTAAQALQHPWIKSIGEAT 303 (382)
T ss_pred CC-CCccccCHHHHHHHHHhcccCcccCCCHHHHhcCccccCCcccc
Confidence 11 11223334577999999999999999999999999987754443
No 53
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-43 Score=336.97 Aligned_cols=252 Identities=29% Similarity=0.472 Sum_probs=205.7
Q ss_pred cccHHHHHHHHhCCCCcceeeecCCeeEEEEEeCCCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeec
Q 011005 194 RIVYEDLIEATEDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLH 273 (496)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~ 273 (496)
++.|+++-+ .+-||.|+.|.||+|+++ ++.||||+++.-+ ..+++-+++++|+||+.|.|+|..
T Consensus 120 eiPFe~IsE-------LeWlGSGaQGAVF~Grl~-netVAVKKV~elk--------ETdIKHLRkLkH~NII~FkGVCtq 183 (904)
T KOG4721|consen 120 EIPFEEISE-------LEWLGSGAQGAVFLGRLH-NETVAVKKVRELK--------ETDIKHLRKLKHPNIITFKGVCTQ 183 (904)
T ss_pred cCCHHHhhh-------hhhhccCcccceeeeecc-CceehhHHHhhhh--------hhhHHHHHhccCcceeeEeeeecC
Confidence 455665533 456999999999999994 6889999986543 356888999999999999999999
Q ss_pred CCeEEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEcccc
Q 011005 274 KKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFG 353 (496)
Q Consensus 274 ~~~~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg 353 (496)
...+|||||||..|-|++.|.... .+.......|.++||.|+.||| .+.|||||||.-||||+.+..|||+|||
T Consensus 184 sPcyCIiMEfCa~GqL~~VLka~~---~itp~llv~Wsk~IA~GM~YLH---~hKIIHRDLKSPNiLIs~~d~VKIsDFG 257 (904)
T KOG4721|consen 184 SPCYCIIMEFCAQGQLYEVLKAGR---PITPSLLVDWSKGIAGGMNYLH---LHKIIHRDLKSPNILISYDDVVKISDFG 257 (904)
T ss_pred CceeEEeeeccccccHHHHHhccC---ccCHHHHHHHHHHhhhhhHHHH---HhhHhhhccCCCceEeeccceEEecccc
Confidence 999999999999999999998765 6788888999999999999999 7899999999999999999999999999
Q ss_pred ccccccCCCCCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCC
Q 011005 354 TARLLHADSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLP 433 (496)
Q Consensus 354 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (496)
-++....- .....++||..|||||++.....++|+|||||||+||||+||..||........ +..+=...+.
T Consensus 258 TS~e~~~~-STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAI-------IwGVGsNsL~ 329 (904)
T KOG4721|consen 258 TSKELSDK-STKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAI-------IWGVGSNSLH 329 (904)
T ss_pred chHhhhhh-hhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchhee-------EEeccCCccc
Confidence 99877544 445568899999999999999999999999999999999999999975432111 1111111121
Q ss_pred CCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccC
Q 011005 434 PPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKT 478 (496)
Q Consensus 434 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~ 478 (496)
-+... ..+.-+.-|+..||+-.|..||+|.+++.|+.+....
T Consensus 330 LpvPs---tcP~GfklL~Kqcw~sKpRNRPSFrqil~HldIa~pe 371 (904)
T KOG4721|consen 330 LPVPS---TCPDGFKLLLKQCWNSKPRNRPSFRQILLHLDIASPE 371 (904)
T ss_pred ccCcc---cCchHHHHHHHHHHhcCCCCCccHHHHHHHHhhcCHH
Confidence 11111 1223366788899999999999999999998776543
No 54
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=2.2e-42 Score=340.75 Aligned_cols=255 Identities=25% Similarity=0.380 Sum_probs=208.6
Q ss_pred hCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccch--hHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEE
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIY 281 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~ 281 (496)
++|.+.+.||+|+||+||+|... +++.||+|++.... .......+.+|++++..++|+||+++++++.+++..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM 80 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence 46889999999999999999765 68999999997643 1233466889999999999999999999999999999999
Q ss_pred EecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCC
Q 011005 282 EYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHAD 361 (496)
Q Consensus 282 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 361 (496)
||+++++|.+++.... .++...+..++.||+.||+||| ..|++||||||+||+++.++.++|+|||++......
T Consensus 81 e~~~~~~L~~~l~~~~---~l~~~~~~~i~~qi~~aL~~LH---~~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~ 154 (350)
T cd05573 81 EYMPGGDLMNLLIRKD---VFPEETARFYIAELVLALDSVH---KLGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKA 154 (350)
T ss_pred cCCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHeEECCCCCEEeecCCCCccCccc
Confidence 9999999999998653 6899999999999999999999 789999999999999999999999999999876543
Q ss_pred C-----------------------------CCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCcccc
Q 011005 362 S-----------------------------SNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILS 412 (496)
Q Consensus 362 ~-----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~ 412 (496)
. .......||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~ 234 (350)
T cd05573 155 KDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDT 234 (350)
T ss_pred CcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCC
Confidence 3 12234568999999999999999999999999999999999999996322
Q ss_pred ccCCCCCCcchhHhhhc--CCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCC-HHHHHHHHHHhc
Q 011005 413 SLSSSSDPKIMLIDVLD--QRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPT-MQSVSQEFLITR 476 (496)
Q Consensus 413 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps-~~evl~~~~~~~ 476 (496)
.......+.. .....+.... ....+.+++.+|+. ||.+||+ ++|+++|+|+..
T Consensus 235 -------~~~~~~~i~~~~~~~~~p~~~~---~~~~~~~li~~ll~-dp~~R~~s~~~ll~hp~~~~ 290 (350)
T cd05573 235 -------LQETYNKIINWKESLRFPPDPP---VSPEAIDLICRLLC-DPEDRLGSFEEIKSHPFFKG 290 (350)
T ss_pred -------HHHHHHHHhccCCcccCCCCCC---CCHHHHHHHHHHcc-ChhhcCCCHHHHhcCCCcCC
Confidence 1112222222 1111111110 12346789999997 9999999 999999999854
No 55
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=7.4e-42 Score=332.70 Aligned_cols=248 Identities=26% Similarity=0.364 Sum_probs=202.3
Q ss_pred ceeeecCCeeEEEEEe----CCCcEEEEEEcccch---hHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEe
Q 011005 211 YCIGTGGYGSVYKAQL----PNGKVFALKKLHTSE---ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEY 283 (496)
Q Consensus 211 ~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~ 283 (496)
+.||+|+||.||++.. ..++.||+|.+.... .......+.+|+.+++.++||||+++++++..++..++||||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~ 81 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY 81 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence 5799999999999965 357899999987643 222335578899999999999999999999999999999999
Q ss_pred cCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCC
Q 011005 284 MERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSS 363 (496)
Q Consensus 284 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 363 (496)
+++|+|.+.+.... .+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||+++.......
T Consensus 82 ~~~~~L~~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 155 (323)
T cd05584 82 LSGGELFMHLEREG---IFMEDTACFYLSEISLALEHLH---QQGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGT 155 (323)
T ss_pred CCCchHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCCEEEeeCcCCeecccCCC
Confidence 99999999987644 5788888899999999999999 78999999999999999999999999999875443333
Q ss_pred CccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHHHH
Q 011005 364 NRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVIRD 443 (496)
Q Consensus 364 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 443 (496)
......|++.|+|||++.+..++.++||||+|+++|||++|+.||.... ...............+.. .
T Consensus 156 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~-------~~~~~~~~~~~~~~~~~~-----~ 223 (323)
T cd05584 156 VTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAEN-------RKKTIDKILKGKLNLPPY-----L 223 (323)
T ss_pred cccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCC-------HHHHHHHHHcCCCCCCCC-----C
Confidence 3344578999999999999899999999999999999999999996321 122222333332221111 1
Q ss_pred HHHHHHHHHhcccCCCCCCC-----CHHHHHHHHHHhc
Q 011005 444 ILLISTVSFACLQSNPKSRP-----TMQSVSQEFLITR 476 (496)
Q Consensus 444 ~~~l~~li~~cl~~dP~~Rp-----s~~evl~~~~~~~ 476 (496)
...+.+++.+||+.||++|| +++++++|+|+..
T Consensus 224 ~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h~~~~~ 261 (323)
T cd05584 224 TPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSHPFFRH 261 (323)
T ss_pred CHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcCCCcCC
Confidence 12467899999999999999 8999999999854
No 56
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.6e-42 Score=356.53 Aligned_cols=255 Identities=26% Similarity=0.431 Sum_probs=209.5
Q ss_pred hCCCCcceeeecCCeeEEEEEeC--CCc----EEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEE
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLP--NGK----VFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMF 278 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~--~~~----~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 278 (496)
...+..+.||+|+||.||.|... .|. .||||.+++..+.+....|.+|..+|+.++|||||+++|.+.+....+
T Consensus 692 ~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~~ 771 (1025)
T KOG1095|consen 692 KNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPPL 771 (1025)
T ss_pred hheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCcE
Confidence 44556778999999999999654 333 499999999887788899999999999999999999999999999999
Q ss_pred EEEEecCCCChhhhhhCCCC----CccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccc
Q 011005 279 LIYEYMERGSLFCNLHNNED----AVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGT 354 (496)
Q Consensus 279 lV~e~~~~g~L~~~l~~~~~----~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~ 354 (496)
+++|||+||+|..+|.+.+. ...++..+.+.++.|||+|+.||+ ++++|||||.++|+|++....|||+|||+
T Consensus 772 i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe---~~~fvHRDLAaRNCLL~~~r~VKIaDFGl 848 (1025)
T KOG1095|consen 772 ILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLE---SKHFVHRDLAARNCLLDERRVVKIADFGL 848 (1025)
T ss_pred EEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHH---hCCCcCcchhhhheeecccCcEEEcccch
Confidence 99999999999999987622 346899999999999999999999 78999999999999999999999999999
Q ss_pred cccccCCCCC-cccc-ccccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccCCCCCCcchhH-hhhcC
Q 011005 355 ARLLHADSSN-RTLL-AGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSSDPKIMLI-DVLDQ 430 (496)
Q Consensus 355 ~~~~~~~~~~-~~~~-~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~-~~~~~ 430 (496)
|+.+...... .... .-...|||||.+.++.++.++|||||||++||++| |..||... ....... -....
T Consensus 849 ArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~-------~n~~v~~~~~~gg 921 (1025)
T KOG1095|consen 849 ARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSR-------SNFEVLLDVLEGG 921 (1025)
T ss_pred hHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCc-------chHHHHHHHHhCC
Confidence 9954333221 1112 23458999999999999999999999999999998 88898632 2222222 33334
Q ss_pred CCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHH
Q 011005 431 RLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLI 474 (496)
Q Consensus 431 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~ 474 (496)
+++.+.. .+..+.+++..||+.+|++||++..+++.+--
T Consensus 922 RL~~P~~-----CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~ 960 (1025)
T KOG1095|consen 922 RLDPPSY-----CPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPA 960 (1025)
T ss_pred ccCCCCC-----CChHHHHHHHHHccCChhhCccHHHHHhhhhh
Confidence 5555432 33457799999999999999999999986443
No 57
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.5e-41 Score=337.54 Aligned_cols=259 Identities=21% Similarity=0.266 Sum_probs=201.3
Q ss_pred hCCCCcceeeecCCeeEEEEEe-CCCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEe
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEY 283 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~ 283 (496)
++|.+.+.||+|+||.||+|.. .+++.||+|.... ..+.+|++++++++||||+++++++..+...++|+|+
T Consensus 92 ~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~-------~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~ 164 (391)
T PHA03212 92 AGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR-------GGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPR 164 (391)
T ss_pred CCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh-------hhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEec
Confidence 5799999999999999999965 4688999997532 3467899999999999999999999999999999999
Q ss_pred cCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCC-
Q 011005 284 MERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADS- 362 (496)
Q Consensus 284 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~- 362 (496)
+. ++|.+++.... .+++..++.++.||+.||+||| +.+|+||||||+||+++.++.++|+|||+++......
T Consensus 165 ~~-~~L~~~l~~~~---~l~~~~~~~i~~qi~~aL~ylH---~~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~ 237 (391)
T PHA03212 165 YK-TDLYCYLAAKR---NIAICDILAIERSVLRAIQYLH---ENRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDINA 237 (391)
T ss_pred CC-CCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChHhEEEcCCCCEEEEeCCcccccccccc
Confidence 95 68888876543 6789999999999999999999 7799999999999999999999999999997543222
Q ss_pred CCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcc--------------------
Q 011005 363 SNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKI-------------------- 422 (496)
Q Consensus 363 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~-------------------- 422 (496)
.......||+.|+|||++.+..++.++||||+||++|||++|+.||-.............
T Consensus 238 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~ 317 (391)
T PHA03212 238 NKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDA 317 (391)
T ss_pred cccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcch
Confidence 223345799999999999999999999999999999999999988642221110000000
Q ss_pred --hhHhhh----cCCCCCC----CChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhcc
Q 011005 423 --MLIDVL----DQRLPPP----VDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRK 477 (496)
Q Consensus 423 --~~~~~~----~~~~~~~----~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~ 477 (496)
...... ......+ ...........+.+++.+||+.||++|||++|+++|+|+...
T Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~hp~f~~~ 382 (391)
T PHA03212 318 QANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDFAAFQDI 382 (391)
T ss_pred hHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcChhhccC
Confidence 000000 0000000 001111223457899999999999999999999999999764
No 58
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=3.6e-42 Score=335.63 Aligned_cols=255 Identities=22% Similarity=0.356 Sum_probs=203.2
Q ss_pred ceeeecCCeeEEEEEeC-CCcEEEEEEcccch--hHHHHHHHHHHHHHHHhh-cccccccccceeecCCeEEEEEEecCC
Q 011005 211 YCIGTGGYGSVYKAQLP-NGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQV-LHRNIVKLYGYCLHKKCMFLIYEYMER 286 (496)
Q Consensus 211 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lV~e~~~~ 286 (496)
+.||+|+||.||+|..+ +++.||+|.++... .....+.+.+|..+++.+ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 36999999999999764 68899999997643 223345678899999998 699999999999999999999999999
Q ss_pred CChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCCCcc
Q 011005 287 GSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRT 366 (496)
Q Consensus 287 g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 366 (496)
|+|..++.... .+++..+..++.|++.||.||| +++++||||||+||+++.++.+||+|||+++..........
T Consensus 81 g~L~~~~~~~~---~l~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~~ 154 (329)
T cd05588 81 GDLMFHMQRQR---KLPEEHARFYSAEISLALNFLH---ERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGDTTS 154 (329)
T ss_pred CCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHeEECCCCCEEECcCccccccccCCCccc
Confidence 99998887543 6899999999999999999999 78999999999999999999999999999975433333344
Q ss_pred ccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCC--CCcchhHhhhcCCCCCCCChhHHHHH
Q 011005 367 LLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSS--DPKIMLIDVLDQRLPPPVDRKVIRDI 444 (496)
Q Consensus 367 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (496)
...||+.|+|||++.+..++.++||||+||++|+|++|+.||+......... ................+.. ..
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-----~~ 229 (329)
T cd05588 155 TFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQIRIPRS-----LS 229 (329)
T ss_pred cccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCCCCCCCC-----CC
Confidence 5679999999999999999999999999999999999999997443211111 1111112222222221111 12
Q ss_pred HHHHHHHHhcccCCCCCCCC------HHHHHHHHHHhc
Q 011005 445 LLISTVSFACLQSNPKSRPT------MQSVSQEFLITR 476 (496)
Q Consensus 445 ~~l~~li~~cl~~dP~~Rps------~~evl~~~~~~~ 476 (496)
..+.+++.+||+.||++||+ ++++++|+|+..
T Consensus 230 ~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~hp~~~~ 267 (329)
T cd05588 230 VKASSVLKGFLNKDPKERLGCHPQTGFRDIKSHPFFRN 267 (329)
T ss_pred HHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcCCCCCC
Confidence 24678999999999999997 789999999964
No 59
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=1e-41 Score=332.02 Aligned_cols=251 Identities=22% Similarity=0.351 Sum_probs=201.6
Q ss_pred CCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccch--hHHHHHHHHHHHHHH---HhhcccccccccceeecCCeEEEE
Q 011005 207 FDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSE--ELAFIKSFKNEAQVL---SQVLHRNIVKLYGYCLHKKCMFLI 280 (496)
Q Consensus 207 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l---~~l~h~niv~~~~~~~~~~~~~lV 280 (496)
|.+.+.||+|+||.||+|... +++.||||.++... .....+.+.+|+.++ +.++||||+++++++..++..++|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 667889999999999999754 68999999997543 222345566676665 456799999999999999999999
Q ss_pred EEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccC
Q 011005 281 YEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHA 360 (496)
Q Consensus 281 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 360 (496)
|||+++|+|...+... .+++..+..++.||+.||.||| +.+++||||||+||+++.++.+||+|||+++....
T Consensus 81 ~E~~~~~~L~~~~~~~----~l~~~~~~~~~~qi~~al~~lH---~~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~ 153 (324)
T cd05589 81 MEYAAGGDLMMHIHTD----VFSEPRAVFYAACVVLGLQYLH---ENKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMG 153 (324)
T ss_pred EcCCCCCcHHHHhhcC----CCCHHHHHHHHHHHHHHHHHHH---hCCeEecCCCHHHeEECCCCcEEeCcccCCccCCC
Confidence 9999999998887643 6899999999999999999999 78999999999999999999999999999876543
Q ss_pred CCCCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhH
Q 011005 361 DSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKV 440 (496)
Q Consensus 361 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 440 (496)
........+|++.|+|||.+.+..++.++|||||||++|+|++|+.||.... ...............+..
T Consensus 154 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~-------~~~~~~~i~~~~~~~p~~--- 223 (324)
T cd05589 154 FGDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDD-------EEEVFDSIVNDEVRYPRF--- 223 (324)
T ss_pred CCCcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCC-------HHHHHHHHHhCCCCCCCC---
Confidence 3333445679999999999999999999999999999999999999986321 111222222222211111
Q ss_pred HHHHHHHHHHHHhcccCCCCCCC-----CHHHHHHHHHHhc
Q 011005 441 IRDILLISTVSFACLQSNPKSRP-----TMQSVSQEFLITR 476 (496)
Q Consensus 441 ~~~~~~l~~li~~cl~~dP~~Rp-----s~~evl~~~~~~~ 476 (496)
....+.+++.+||+.||.+|| ++.++++|+|+..
T Consensus 224 --~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~~~f~~ 262 (324)
T cd05589 224 --LSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQPFFRD 262 (324)
T ss_pred --CCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhCCCcCC
Confidence 122467899999999999999 6999999998754
No 60
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=6.6e-43 Score=305.56 Aligned_cols=259 Identities=24% Similarity=0.363 Sum_probs=212.5
Q ss_pred HHhCCCCcceeeecCCeeEEEEEe-CCCcEEEEEEcccch-------hHHHHHHHHHHHHHHHhhc-ccccccccceeec
Q 011005 203 ATEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSE-------ELAFIKSFKNEAQVLSQVL-HRNIVKLYGYCLH 273 (496)
Q Consensus 203 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-------~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~ 273 (496)
.-+.|...+.||.|..++|-++.+ ++|+.+|+|++.... -....+.-..|+.+++++. ||+|+++.++++.
T Consensus 15 fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes 94 (411)
T KOG0599|consen 15 FYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYES 94 (411)
T ss_pred HHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccC
Confidence 456788888999999999999955 478899999885422 1122344568999999995 9999999999999
Q ss_pred CCeEEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEcccc
Q 011005 274 KKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFG 353 (496)
Q Consensus 274 ~~~~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg 353 (496)
+...++|+|.|+.|.|++++...- .+++.+..+|++|+..|++||| ...|+||||||+|||++++.+++|+|||
T Consensus 95 ~sF~FlVFdl~prGELFDyLts~V---tlSEK~tR~iMrqlfegVeylH---a~~IVHRDLKpENILlddn~~i~isDFG 168 (411)
T KOG0599|consen 95 DAFVFLVFDLMPRGELFDYLTSKV---TLSEKETRRIMRQLFEGVEYLH---ARNIVHRDLKPENILLDDNMNIKISDFG 168 (411)
T ss_pred cchhhhhhhhcccchHHHHhhhhe---eecHHHHHHHHHHHHHHHHHHH---HhhhhhcccChhheeeccccceEEeccc
Confidence 999999999999999999998654 7899999999999999999999 8899999999999999999999999999
Q ss_pred ccccccCCCCCcccccccccccccccccc------CCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcc-hhHh
Q 011005 354 TARLLHADSSNRTLLAGTYGYIAPELAYT------MVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKI-MLID 426 (496)
Q Consensus 354 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~-~~~~ 426 (496)
+++.+.. +......||||+|+|||.+.. ..|+..+|+||.|+|+|.++.|.+||... ... +...
T Consensus 169 Fa~~l~~-GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHR--------kQmlMLR~ 239 (411)
T KOG0599|consen 169 FACQLEP-GEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHR--------KQMLMLRM 239 (411)
T ss_pred eeeccCC-chhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHH--------HHHHHHHH
Confidence 9998854 445566899999999998763 36788999999999999999999999522 222 2233
Q ss_pred hhcCCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhcc
Q 011005 427 VLDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRK 477 (496)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~ 477 (496)
++.+... ..+..+........+|+.+||+.||.+|.|++|+|+|+|+...
T Consensus 240 ImeGkyq-F~speWadis~~~KdLIsrlLqVdp~~Ritake~LaHpff~q~ 289 (411)
T KOG0599|consen 240 IMEGKYQ-FRSPEWADISATVKDLISRLLQVDPTKRITAKEALAHPFFIQI 289 (411)
T ss_pred HHhcccc-cCCcchhhccccHHHHHHHHHeeCchhcccHHHHhcChHHHHH
Confidence 3333322 2223344445567899999999999999999999999999543
No 61
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=2.9e-41 Score=322.08 Aligned_cols=247 Identities=21% Similarity=0.303 Sum_probs=198.4
Q ss_pred ceeeecCCeeEEEEEeCCCcEEEEEEcccch--hHHHHHHHHHHHHHHHhhcccccccccceeec----CCeEEEEEEec
Q 011005 211 YCIGTGGYGSVYKAQLPNGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLH----KKCMFLIYEYM 284 (496)
Q Consensus 211 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~----~~~~~lV~e~~ 284 (496)
..||+|++|.||+|.+ +|+.||||.+.... .....+.+.+|+.++++++||||+++++++.+ ....++||||+
T Consensus 26 ~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey~ 104 (283)
T PHA02988 26 VLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEYC 104 (283)
T ss_pred eEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEeC
Confidence 6799999999999998 68899999997643 22334678899999999999999999999876 34689999999
Q ss_pred CCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCCC
Q 011005 285 ERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSN 364 (496)
Q Consensus 285 ~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 364 (496)
++|+|.+++.... .+++.....++.|++.|+.|||+ ..+++||||||+||++++++.+||+|||+++......
T Consensus 105 ~~g~L~~~l~~~~---~~~~~~~~~i~~~i~~~l~~lH~--~~~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~-- 177 (283)
T PHA02988 105 TRGYLREVLDKEK---DLSFKTKLDMAIDCCKGLYNLYK--YTNKPYKNLTSVSFLVTENYKLKIICHGLEKILSSPP-- 177 (283)
T ss_pred CCCcHHHHHhhCC---CCChhHHHHHHHHHHHHHHHHHh--cCCCCCCcCChhhEEECCCCcEEEcccchHhhhcccc--
Confidence 9999999998653 68899999999999999999994 2488899999999999999999999999998664322
Q ss_pred cccccccccccccccccc--CCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHHH
Q 011005 365 RTLLAGTYGYIAPELAYT--MVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVIR 442 (496)
Q Consensus 365 ~~~~~gt~~y~aPE~~~~--~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (496)
....++..|+|||++.+ ..++.++||||||+++|||++|+.||.... ................... .
T Consensus 178 -~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~-------~~~~~~~i~~~~~~~~~~~---~ 246 (283)
T PHA02988 178 -FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLT-------TKEIYDLIINKNNSLKLPL---D 246 (283)
T ss_pred -ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCC-------HHHHHHHHHhcCCCCCCCC---c
Confidence 23467889999999976 688999999999999999999999997321 1112222221211111111 1
Q ss_pred HHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhc
Q 011005 443 DILLISTVSFACLQSNPKSRPTMQSVSQEFLITR 476 (496)
Q Consensus 443 ~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~ 476 (496)
....+.+++.+||+.||++|||++|+++.+....
T Consensus 247 ~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~ 280 (283)
T PHA02988 247 CPLEIKCIVEACTSHDSIKRPNIKEILYNLSLYK 280 (283)
T ss_pred CcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHH
Confidence 2335789999999999999999999999886543
No 62
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=5.6e-42 Score=313.94 Aligned_cols=272 Identities=23% Similarity=0.275 Sum_probs=210.3
Q ss_pred hCCCCcceeeecCCeeEEEEEe-CCCcEEEEEEcccchh-HHHHHHHHHHHHHHHhhcccc-cccccceeecCC------
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSEE-LAFIKSFKNEAQVLSQVLHRN-IVKLYGYCLHKK------ 275 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~n-iv~~~~~~~~~~------ 275 (496)
..|+..++||+|+||+||+|+. .+|+.||+|+++.... +.......+|+.++++++|+| ||.+++++...+
T Consensus 11 ~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~ 90 (323)
T KOG0594|consen 11 FDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIG 90 (323)
T ss_pred HHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccc
Confidence 4466677899999999999965 4789999999987643 223345689999999999999 999999998877
Q ss_pred eEEEEEEecCCCChhhhhhCCCCC-ccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccc
Q 011005 276 CMFLIYEYMERGSLFCNLHNNEDA-VELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGT 354 (496)
Q Consensus 276 ~~~lV~e~~~~g~L~~~l~~~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~ 354 (496)
.+++|+||++. +|..++...... ..++...+..+++||+.||+||| +++|+||||||+|++++++|.+||+|||+
T Consensus 91 ~l~lvfe~~d~-DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H---~~~IlHRDLKPQNlLi~~~G~lKlaDFGl 166 (323)
T KOG0594|consen 91 KLYLVFEFLDR-DLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLH---SHGILHRDLKPQNLLISSSGVLKLADFGL 166 (323)
T ss_pred eEEEEEEeecc-cHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHH---hCCeecccCCcceEEECCCCcEeeeccch
Confidence 78999999965 899888876532 34666889999999999999999 88999999999999999999999999999
Q ss_pred cccccCCCCCccccccccccccccccccC-CcCcccchhhHHHHHHHHHhCCCCCcccccc-------------CCCCCC
Q 011005 355 ARLLHADSSNRTLLAGTYGYIAPELAYTM-VMTEKCDVYSFGVVTLEVLMGKHPRDILSSL-------------SSSSDP 420 (496)
Q Consensus 355 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~el~~g~~p~~~~~~~-------------~~~~~~ 420 (496)
|+...-+....+..++|.+|+|||++.+. .|+...||||+|||++||++++.-|...+.. .....+
T Consensus 167 Ara~~ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~Wp 246 (323)
T KOG0594|consen 167 ARAFSIPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDWP 246 (323)
T ss_pred HHHhcCCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCCC
Confidence 99876666667778899999999999887 7999999999999999999999888644321 011111
Q ss_pred cchhHhhhcCCCCCC-----CChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCCC
Q 011005 421 KIMLIDVLDQRLPPP-----VDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTPL 480 (496)
Q Consensus 421 ~~~~~~~~~~~~~~~-----~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~~ 480 (496)
............+.. .............+++.+||+.+|.+|.|++.+++|+++......
T Consensus 247 ~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~~~~~ 311 (323)
T KOG0594|consen 247 GVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFSELPEK 311 (323)
T ss_pred CccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcChhhcccccc
Confidence 111110011011100 001011111346789999999999999999999999998765433
No 63
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=1e-41 Score=329.28 Aligned_cols=262 Identities=22% Similarity=0.320 Sum_probs=198.7
Q ss_pred HhCCCCcceeeecCCeeEEEEEeCC-----------------CcEEEEEEcccchhHHHHHHHHHHHHHHHhhccccccc
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLPN-----------------GKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVK 266 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~~-----------------~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~ 266 (496)
.++|.+.+.||+|+||.||+|.+++ +..||+|.+...........+.+|+.++++++||||++
T Consensus 4 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 83 (304)
T cd05096 4 RGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIR 83 (304)
T ss_pred hhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeE
Confidence 3578899999999999999997532 33699999877544445567899999999999999999
Q ss_pred ccceeecCCeEEEEEEecCCCChhhhhhCCC----------------CCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeE
Q 011005 267 LYGYCLHKKCMFLIYEYMERGSLFCNLHNNE----------------DAVELDWAKRVNIVKAMAHALAYLHHDCSPSII 330 (496)
Q Consensus 267 ~~~~~~~~~~~~lV~e~~~~g~L~~~l~~~~----------------~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~ 330 (496)
+++++...+..++||||+++|+|.+++.... ....+++..+++++.||+.||.||| +.+|+
T Consensus 84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH---~~~iv 160 (304)
T cd05096 84 LLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLS---SLNFV 160 (304)
T ss_pred EEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHH---HCCcc
Confidence 9999999999999999999999999886432 1124688889999999999999999 78999
Q ss_pred EeCCCCCceEecCCCCeEEccccccccccCCCCC--ccccccccccccccccccCCcCcccchhhHHHHHHHHHh--CCC
Q 011005 331 HRDISSNNILLNSKLEAFVADFGTARLLHADSSN--RTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM--GKH 406 (496)
Q Consensus 331 H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~--g~~ 406 (496)
||||||+|||++.++.+||+|||+++........ .....++..|+|||++.+..++.++||||||+++|||++ +..
T Consensus 161 H~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~ 240 (304)
T cd05096 161 HRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQ 240 (304)
T ss_pred ccCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCC
Confidence 9999999999999999999999999765432211 122345778999999998899999999999999999987 556
Q ss_pred CCccccccCCCCCCcchhHhhhcCCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHH
Q 011005 407 PRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEF 472 (496)
Q Consensus 407 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~ 472 (496)
||...... .........................+..+.+++.+||+.||++|||+.|+.+.+
T Consensus 241 p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l 302 (304)
T cd05096 241 PYGELTDE----QVIENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFL 302 (304)
T ss_pred CCCcCCHH----HHHHHHHHHhhhccccccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHH
Confidence 76532210 000000011110000000000001123578999999999999999999997765
No 64
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=8.4e-42 Score=331.74 Aligned_cols=248 Identities=23% Similarity=0.377 Sum_probs=201.3
Q ss_pred ceeeecCCeeEEEEEeC-CCcEEEEEEcccch--hHHHHHHHHHHHHHHHhh-cccccccccceeecCCeEEEEEEecCC
Q 011005 211 YCIGTGGYGSVYKAQLP-NGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQV-LHRNIVKLYGYCLHKKCMFLIYEYMER 286 (496)
Q Consensus 211 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lV~e~~~~ 286 (496)
+.||+|+||+||+|..+ +++.||+|.+.... .......+..|..+++.+ +||||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 36999999999999765 58899999987543 223345667888888877 699999999999999999999999999
Q ss_pred CChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCCCcc
Q 011005 287 GSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRT 366 (496)
Q Consensus 287 g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 366 (496)
|+|.+++.... .+++..+..++.|++.||+||| +.+++||||||+||+++.++.++|+|||+++..........
T Consensus 81 g~L~~~i~~~~---~l~~~~~~~~~~ql~~~L~~lH---~~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~~~~ 154 (320)
T cd05590 81 GDLMFHIQKSR---RFDEARARFYAAEITSALMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKTTS 154 (320)
T ss_pred chHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCCccc
Confidence 99999887654 6889999999999999999999 78999999999999999999999999999876533333344
Q ss_pred ccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHHHHHHH
Q 011005 367 LLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVIRDILL 446 (496)
Q Consensus 367 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (496)
...||+.|+|||++.+..++.++||||+|+++|+|++|+.||.... .......+.......+.. ....
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~-------~~~~~~~i~~~~~~~~~~-----~~~~ 222 (320)
T cd05590 155 TFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAEN-------EDDLFEAILNDEVVYPTW-----LSQD 222 (320)
T ss_pred ccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCC-------HHHHHHHHhcCCCCCCCC-----CCHH
Confidence 5679999999999999999999999999999999999999996322 122222222222221110 1224
Q ss_pred HHHHHHhcccCCCCCCCCH------HHHHHHHHHhc
Q 011005 447 ISTVSFACLQSNPKSRPTM------QSVSQEFLITR 476 (496)
Q Consensus 447 l~~li~~cl~~dP~~Rps~------~evl~~~~~~~ 476 (496)
+.+++.+||+.||++||++ +++++|+|+..
T Consensus 223 ~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h~~f~~ 258 (320)
T cd05590 223 AVDILKAFMTKNPTMRLGSLTLGGEEAILRHPFFKE 258 (320)
T ss_pred HHHHHHHHcccCHHHCCCCCCCCCHHHHHcCCCcCC
Confidence 6789999999999999998 99999999854
No 65
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=4.8e-42 Score=334.65 Aligned_cols=255 Identities=23% Similarity=0.365 Sum_probs=201.7
Q ss_pred ceeeecCCeeEEEEEeC-CCcEEEEEEcccch--hHHHHHHHHHHHHHHHhh-cccccccccceeecCCeEEEEEEecCC
Q 011005 211 YCIGTGGYGSVYKAQLP-NGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQV-LHRNIVKLYGYCLHKKCMFLIYEYMER 286 (496)
Q Consensus 211 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lV~e~~~~ 286 (496)
+.||+|+||.||+|..+ +++.||+|.+.... .......+.+|+.++.++ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 36999999999999764 67899999987642 223345677888888877 799999999999999999999999999
Q ss_pred CChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCCCcc
Q 011005 287 GSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRT 366 (496)
Q Consensus 287 g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 366 (496)
|+|..++.... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++..........
T Consensus 81 ~~L~~~~~~~~---~l~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~~~~ 154 (329)
T cd05618 81 GDLMFHMQRQR---KLPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTS 154 (329)
T ss_pred CCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEECCCCCEEEeeCCccccccCCCCccc
Confidence 99998887543 6899999999999999999999 78999999999999999999999999999976433333344
Q ss_pred ccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCC-cc-hhHhhhcCCCCCCCChhHHHHH
Q 011005 367 LLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDP-KI-MLIDVLDQRLPPPVDRKVIRDI 444 (496)
Q Consensus 367 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~ 444 (496)
...||+.|+|||++.+..++.++||||+|+++|+|++|+.||............ .. ............+. ...
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~-----~~~ 229 (329)
T cd05618 155 TFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR-----SLS 229 (329)
T ss_pred cccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCCCCCCC-----CCC
Confidence 567899999999999999999999999999999999999999643321111111 11 11112222221111 112
Q ss_pred HHHHHHHHhcccCCCCCCCC------HHHHHHHHHHhc
Q 011005 445 LLISTVSFACLQSNPKSRPT------MQSVSQEFLITR 476 (496)
Q Consensus 445 ~~l~~li~~cl~~dP~~Rps------~~evl~~~~~~~ 476 (496)
..+.+++.+||+.||++||+ +.++++|+|+..
T Consensus 230 ~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~hp~f~~ 267 (329)
T cd05618 230 VKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRN 267 (329)
T ss_pred HHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcCCCCCC
Confidence 24678999999999999998 589999998854
No 66
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=5.5e-42 Score=334.00 Aligned_cols=249 Identities=21% Similarity=0.293 Sum_probs=201.1
Q ss_pred ceeeecCCeeEEEEEe-CCCcEEEEEEcccch--hHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEecCCC
Q 011005 211 YCIGTGGYGSVYKAQL-PNGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEYMERG 287 (496)
Q Consensus 211 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~~~~g 287 (496)
+.||+|+||.||++.. .+++.||+|.+.... .......+.+|+++++.++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 3699999999999975 478999999997643 2223456778999999999999999999999999999999999999
Q ss_pred ChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCCCccc
Q 011005 288 SLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTL 367 (496)
Q Consensus 288 ~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 367 (496)
+|..++.... .+++..+..++.||+.||.|||+ ..+|+||||||+|||++.++.+||+|||+++...........
T Consensus 81 ~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~lH~--~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~ 155 (325)
T cd05594 81 ELFFHLSRER---VFSEDRARFYGAEIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT 155 (325)
T ss_pred cHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHh--cCCEEecCCCCCeEEECCCCCEEEecCCCCeecCCCCccccc
Confidence 9998887543 68999999999999999999993 269999999999999999999999999998764433333344
Q ss_pred cccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHHHHHHHH
Q 011005 368 LAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVIRDILLI 447 (496)
Q Consensus 368 ~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 447 (496)
..||+.|+|||++.+..++.++||||+||++|+|++|+.||.... ...............+.. ....+
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~-------~~~~~~~i~~~~~~~p~~-----~~~~~ 223 (325)
T cd05594 156 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD-------HEKLFELILMEEIRFPRT-----LSPEA 223 (325)
T ss_pred ccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCC-------HHHHHHHHhcCCCCCCCC-----CCHHH
Confidence 579999999999999999999999999999999999999985321 111111111121111111 12246
Q ss_pred HHHHHhcccCCCCCCC-----CHHHHHHHHHHhc
Q 011005 448 STVSFACLQSNPKSRP-----TMQSVSQEFLITR 476 (496)
Q Consensus 448 ~~li~~cl~~dP~~Rp-----s~~evl~~~~~~~ 476 (496)
.+++.+||+.||++|+ ++.++++|+|+..
T Consensus 224 ~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~ 257 (325)
T cd05594 224 KSLLSGLLKKDPKQRLGGGPDDAKEIMQHKFFAG 257 (325)
T ss_pred HHHHHHHhhcCHHHhCCCCCCCHHHHhcCCCcCC
Confidence 7899999999999996 9999999999864
No 67
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=9.3e-44 Score=314.85 Aligned_cols=258 Identities=28% Similarity=0.417 Sum_probs=224.8
Q ss_pred CCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEec
Q 011005 206 DFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEYM 284 (496)
Q Consensus 206 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~~ 284 (496)
-|.+..+||+|+||.||||.++ .|+.+|||++....+ .+++..|+.+|++.+.|++|++||.+.....+|+|||||
T Consensus 34 VFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~sD---LQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYC 110 (502)
T KOG0574|consen 34 VFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDTD---LQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYC 110 (502)
T ss_pred HHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCccch---HHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhc
Confidence 3677888999999999999654 699999999987654 467889999999999999999999999999999999999
Q ss_pred CCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCCC
Q 011005 285 ERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSN 364 (496)
Q Consensus 285 ~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 364 (496)
..|+..+++.... ..+++.++..+++.-++||+||| ...-+|||||+.|||++.+|.+||+|||.|-.+.+.-..
T Consensus 111 GAGSiSDI~R~R~--K~L~E~EIs~iL~~TLKGL~YLH---~~~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTMAK 185 (502)
T KOG0574|consen 111 GAGSISDIMRARR--KPLSEQEISAVLRDTLKGLQYLH---DLKKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTMAK 185 (502)
T ss_pred CCCcHHHHHHHhc--CCccHHHHHHHHHHHHhHHHHHH---HHHHHHhhcccccEEEcccchhhhhhccccchhhhhHHh
Confidence 9999999998654 37899999999999999999999 667899999999999999999999999999877655455
Q ss_pred ccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHHHHH
Q 011005 365 RTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVIRDI 444 (496)
Q Consensus 365 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (496)
..+..|||.|||||++..-.|+.++||||+|++..||..|++||....++. .-++.+.-+++....+..+.
T Consensus 186 RNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMR---------AIFMIPT~PPPTF~KPE~WS 256 (502)
T KOG0574|consen 186 RNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMR---------AIFMIPTKPPPTFKKPEEWS 256 (502)
T ss_pred hCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccc---------eeEeccCCCCCCCCChHhhh
Confidence 667889999999999999999999999999999999999999997655432 22233444555556677777
Q ss_pred HHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCCC
Q 011005 445 LLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTPL 480 (496)
Q Consensus 445 ~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~~ 480 (496)
..+.+++.+||...|++|-|+.++++|+|+....+.
T Consensus 257 ~~F~DFi~~CLiK~PE~R~TA~~L~~H~FiknA~g~ 292 (502)
T KOG0574|consen 257 SEFNDFIRSCLIKKPEERKTALRLCEHTFIKNAPGC 292 (502)
T ss_pred hHHHHHHHHHhcCCHHHHHHHHHHhhhhhhcCCCcc
Confidence 889999999999999999999999999999887654
No 68
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=1.5e-41 Score=323.93 Aligned_cols=253 Identities=24% Similarity=0.301 Sum_probs=200.9
Q ss_pred eeecCCeeEEEEEeC-CCcEEEEEEcccchh--HHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEecCCCCh
Q 011005 213 IGTGGYGSVYKAQLP-NGKVFALKKLHTSEE--LAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEYMERGSL 289 (496)
Q Consensus 213 lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~~~~g~L 289 (496)
||+|+||+||++..+ +++.||+|.+..... ....+.+..|+++++.++|+||+++.+++..+...++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 699999999999764 688999999875432 22335677899999999999999999999999999999999999999
Q ss_pred hhhhhCC-CCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCCCcccc
Q 011005 290 FCNLHNN-EDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLL 368 (496)
Q Consensus 290 ~~~l~~~-~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 368 (496)
..++... .....+++..+..++.||+.||.||| +.+|+||||||+||+++.++.++|+|||++.............
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~ 157 (280)
T cd05608 81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLH---QRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSKTKGY 157 (280)
T ss_pred HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEeeCccceecCCCCcccccc
Confidence 8887542 22346899999999999999999999 7899999999999999999999999999998765443333445
Q ss_pred ccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHHHHHHHHH
Q 011005 369 AGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVIRDILLIS 448 (496)
Q Consensus 369 ~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 448 (496)
.||+.|+|||.+.+..++.++||||+|+++|+|++|+.||...... ................. .......+.
T Consensus 158 ~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~---~~~~~~~~~~~~~~~~~-----~~~~~~~~~ 229 (280)
T cd05608 158 AGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEK---VENKELKQRILNDSVTY-----PDKFSPASK 229 (280)
T ss_pred CCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcc---hhHHHHHHhhcccCCCC-----cccCCHHHH
Confidence 7899999999999999999999999999999999999999632210 00011111111111110 111223467
Q ss_pred HHHHhcccCCCCCCC-----CHHHHHHHHHHhc
Q 011005 449 TVSFACLQSNPKSRP-----TMQSVSQEFLITR 476 (496)
Q Consensus 449 ~li~~cl~~dP~~Rp-----s~~evl~~~~~~~ 476 (496)
+++.+||+.||++|| +++++++|+|+..
T Consensus 230 ~li~~~l~~~P~~R~~~~~~~~~~~l~h~~~~~ 262 (280)
T cd05608 230 SFCEALLAKDPEKRLGFRDGNCDGLRTHPLFRD 262 (280)
T ss_pred HHHHHHhcCCHHHhcCCCCCCHHHHhcChhhhc
Confidence 899999999999999 8899999999965
No 69
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=6.8e-42 Score=338.93 Aligned_cols=255 Identities=24% Similarity=0.350 Sum_probs=204.7
Q ss_pred hCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccch--hHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEE
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIY 281 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~ 281 (496)
++|++.+.||+|+||+||+|... +++.||||++.... .......+.+|+.+++.++||||+++++++..++..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM 80 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence 47899999999999999999765 68999999997643 2233456788999999999999999999999999999999
Q ss_pred EecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCC
Q 011005 282 EYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHAD 361 (496)
Q Consensus 282 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 361 (496)
||+++|+|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+|||++.++.++|+|||+++.+...
T Consensus 81 E~~~~g~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 154 (364)
T cd05599 81 EYLPGGDMMTLLMKKD---TFTEEETRFYIAETILAIDSIH---KLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKS 154 (364)
T ss_pred CCCCCcHHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeEECCCCCEEEeecccceecccc
Confidence 9999999999987644 6899999999999999999999 789999999999999999999999999998764321
Q ss_pred CC--------------------------------------CccccccccccccccccccCCcCcccchhhHHHHHHHHHh
Q 011005 362 SS--------------------------------------NRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM 403 (496)
Q Consensus 362 ~~--------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~ 403 (496)
.. .....+||+.|+|||++.+..++.++||||+||++|||++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~ 234 (364)
T cd05599 155 HRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLV 234 (364)
T ss_pred ccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhc
Confidence 10 0012468999999999999999999999999999999999
Q ss_pred CCCCCccccccCCCCCCcchhHhhhcC--CCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCC---HHHHHHHHHHhc
Q 011005 404 GKHPRDILSSLSSSSDPKIMLIDVLDQ--RLPPPVDRKVIRDILLISTVSFACLQSNPKSRPT---MQSVSQEFLITR 476 (496)
Q Consensus 404 g~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps---~~evl~~~~~~~ 476 (496)
|..||..... .......... ....+... .....+.+++.+|+. +|.+|++ ++|+++|+|+..
T Consensus 235 G~~Pf~~~~~-------~~~~~~i~~~~~~~~~~~~~---~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h~~~~~ 301 (364)
T cd05599 235 GYPPFCSDNP-------QETYRKIINWKETLQFPDEV---PLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSHPFFKG 301 (364)
T ss_pred CCCCCCCCCH-------HHHHHHHHcCCCccCCCCCC---CCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcCCCcCC
Confidence 9999963221 1112222211 11111111 112246688889996 9999998 999999999854
No 70
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=1.5e-41 Score=338.11 Aligned_cols=255 Identities=23% Similarity=0.332 Sum_probs=200.8
Q ss_pred CCCCcceeeecCCeeEEEEEe-CCCcEEEEEEcccch--hHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEE
Q 011005 206 DFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYE 282 (496)
Q Consensus 206 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e 282 (496)
.|++.+.||+|+||+||+|.. .+++.||+|++.... .......+.+|+.++++++|+||+++++++.+++..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E 81 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence 588899999999999999965 468899999997643 22344678899999999999999999999999999999999
Q ss_pred ecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCC
Q 011005 283 YMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADS 362 (496)
Q Consensus 283 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 362 (496)
|+++|+|.+++.... .+++..+..++.||+.||+||| ..+|+||||||+|||++.++.++|+|||+++......
T Consensus 82 ~~~gg~L~~~l~~~~---~~~e~~~~~~~~qi~~aL~~LH---~~givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~ 155 (381)
T cd05626 82 YIPGGDMMSLLIRME---VFPEVLARFYIAELTLAIESVH---KMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTH 155 (381)
T ss_pred cCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---hCCeeecCCcHHHEEECCCCCEEEeeCcCCccccccc
Confidence 999999999987654 5788889999999999999999 7899999999999999999999999999975431100
Q ss_pred C-----------------------------------------------CccccccccccccccccccCCcCcccchhhHH
Q 011005 363 S-----------------------------------------------NRTLLAGTYGYIAPELAYTMVMTEKCDVYSFG 395 (496)
Q Consensus 363 ~-----------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG 395 (496)
. .....+||+.|+|||++.+..++.++||||+|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG 235 (381)
T cd05626 156 NSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVG 235 (381)
T ss_pred ccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehh
Confidence 0 01234699999999999999999999999999
Q ss_pred HHHHHHHhCCCCCccccccCCCCCCcchhHhhhc--CCCCCCCChhHHHHHHHHHHHHHh--cccCCCCCCCCHHHHHHH
Q 011005 396 VVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLD--QRLPPPVDRKVIRDILLISTVSFA--CLQSNPKSRPTMQSVSQE 471 (496)
Q Consensus 396 ~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~li~~--cl~~dP~~Rps~~evl~~ 471 (496)
|++|||++|+.||.... .......... .....+... .....+.+++.+ |+..+|..||+++|+++|
T Consensus 236 ~il~elltG~~Pf~~~~-------~~~~~~~i~~~~~~~~~~~~~---~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~h 305 (381)
T cd05626 236 VILFEMLVGQPPFLAPT-------PTETQLKVINWENTLHIPPQV---KLSPEAVDLITKLCCSAEERLGRNGADDIKAH 305 (381)
T ss_pred hHHHHHHhCCCCCcCCC-------HHHHHHHHHccccccCCCCCC---CCCHHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence 99999999999996321 1111122221 111111110 011235677777 556666679999999999
Q ss_pred HHHhc
Q 011005 472 FLITR 476 (496)
Q Consensus 472 ~~~~~ 476 (496)
+|+..
T Consensus 306 p~f~~ 310 (381)
T cd05626 306 PFFSE 310 (381)
T ss_pred cccCC
Confidence 99864
No 71
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=2e-41 Score=329.88 Aligned_cols=253 Identities=22% Similarity=0.346 Sum_probs=203.5
Q ss_pred CCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccch--hHHHHHHHHHHHHHHHhhcc-cccccccceeecCCeEEEEE
Q 011005 206 DFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLH-RNIVKLYGYCLHKKCMFLIY 281 (496)
Q Consensus 206 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h-~niv~~~~~~~~~~~~~lV~ 281 (496)
+|++.+.||+|+||.||+|..+ +++.||+|.+.... .....+.+..|..+++.+.| ++|+++++++...+..++||
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 4788999999999999999765 57889999987643 22334567889999999976 56888999999999999999
Q ss_pred EecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCC
Q 011005 282 EYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHAD 361 (496)
Q Consensus 282 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 361 (496)
||+++|+|.+++.... .+++..+..++.||+.||+||| +.+|+||||||+|||++.++.++|+|||++......
T Consensus 81 E~~~~g~L~~~~~~~~---~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~ 154 (324)
T cd05587 81 EYVNGGDLMYHIQQVG---KFKEPHAVFYAAEIAIGLFFLH---SKGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFG 154 (324)
T ss_pred cCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHeEEcCCCCEEEeecCcceecCCC
Confidence 9999999999887543 6788999999999999999999 789999999999999999999999999998754333
Q ss_pred CCCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHH
Q 011005 362 SSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVI 441 (496)
Q Consensus 362 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (496)
........||+.|+|||++.+..++.++||||+||++|+|++|+.||.... .......+.......+..
T Consensus 155 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~-------~~~~~~~i~~~~~~~~~~---- 223 (324)
T cd05587 155 GKTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGED-------EDELFQSIMEHNVSYPKS---- 223 (324)
T ss_pred CCceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCC-------HHHHHHHHHcCCCCCCCC----
Confidence 333445678999999999999999999999999999999999999996321 112222222222211111
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCH-----HHHHHHHHHhc
Q 011005 442 RDILLISTVSFACLQSNPKSRPTM-----QSVSQEFLITR 476 (496)
Q Consensus 442 ~~~~~l~~li~~cl~~dP~~Rps~-----~evl~~~~~~~ 476 (496)
....+.+++.+||..||.+|++. +++++|+|+..
T Consensus 224 -~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~hp~~~~ 262 (324)
T cd05587 224 -LSKEAVSICKGLLTKHPAKRLGCGPTGERDIREHAFFRR 262 (324)
T ss_pred -CCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCCcCC
Confidence 11246789999999999999986 89999988754
No 72
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-41 Score=343.56 Aligned_cols=258 Identities=24% Similarity=0.351 Sum_probs=210.7
Q ss_pred CCCCcceeeecCCeeEEEEEeCCC-cEEEEEEcccchhHHHHHHHHHHHHHHHhhc-cccccccccee-ec------CCe
Q 011005 206 DFDIRYCIGTGGYGSVYKAQLPNG-KVFALKKLHTSEELAFIKSFKNEAQVLSQVL-HRNIVKLYGYC-LH------KKC 276 (496)
Q Consensus 206 ~~~~~~~lg~G~~g~Vy~~~~~~~-~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~-~~------~~~ 276 (496)
++++.+.|.+|||+.||.|....+ ..||+|++... ++...+.+.+|+++|+.|. |+|||.+++.. .. ..+
T Consensus 38 ~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~-de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~E 116 (738)
T KOG1989|consen 38 RVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVN-DEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWE 116 (738)
T ss_pred EEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecC-CHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeE
Confidence 466788899999999999977665 99999999877 5566788999999999997 99999999933 22 135
Q ss_pred EEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccc
Q 011005 277 MFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTAR 356 (496)
Q Consensus 277 ~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~ 356 (496)
++|.||||.||.|-+++...... .|++.++++|+.|+++|+++||.. ..+|||||||-+|||++.+++.||||||.+.
T Consensus 117 vllLmEyC~gg~Lvd~mn~Rlq~-~lte~eVLkIf~dv~~AVa~mH~~-~pPiIHRDLKiENvLls~~g~~KLCDFGSat 194 (738)
T KOG1989|consen 117 VLLLMEYCKGGSLVDFMNTRLQT-RLTEDEVLKIFYDVCEAVAAMHYL-KPPIIHRDLKIENVLLSADGNYKLCDFGSAT 194 (738)
T ss_pred EEeehhhccCCcHHHHHHHHHhc-cCChHHHHHHHHHHHHHHHHHhcC-CCccchhhhhhhheEEcCCCCEEeCcccccc
Confidence 78999999999999999876554 499999999999999999999976 7789999999999999999999999999997
Q ss_pred cccCCCCCc---------ccccccccccccccc---ccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchh
Q 011005 357 LLHADSSNR---------TLLAGTYGYIAPELA---YTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIML 424 (496)
Q Consensus 357 ~~~~~~~~~---------~~~~gt~~y~aPE~~---~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~ 424 (496)
......... .....|+.|+|||.+ .+..+++|+|||||||+||-|+....||+....
T Consensus 195 t~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~----------- 263 (738)
T KOG1989|consen 195 TKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGK----------- 263 (738)
T ss_pred cccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcc-----------
Confidence 654333111 113478999999976 577899999999999999999999999974322
Q ss_pred HhhhcCCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCCC
Q 011005 425 IDVLDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTPL 480 (496)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~~ 480 (496)
..++......+... .....+.+||..||++||++||++.|++++++.....+.
T Consensus 264 laIlng~Y~~P~~p---~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~~~ 316 (738)
T KOG1989|consen 264 LAILNGNYSFPPFP---NYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELANKPC 316 (738)
T ss_pred eeEEeccccCCCCc---cHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhcCCC
Confidence 22333333322221 223357899999999999999999999999998887665
No 73
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=3.3e-41 Score=334.30 Aligned_cols=258 Identities=26% Similarity=0.377 Sum_probs=203.1
Q ss_pred HhCCCCcceeeecCCeeEEEEEe------CCCcEEEEEEcccchhHHHHHHHHHHHHHHHhh-cccccccccceeecCCe
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQL------PNGKVFALKKLHTSEELAFIKSFKNEAQVLSQV-LHRNIVKLYGYCLHKKC 276 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~ 276 (496)
.++|++.+.||+|+||.||+|.+ ..+..||||+++........+.+.+|+.+++.+ +||||+++++++..++.
T Consensus 34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~ 113 (375)
T cd05104 34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGP 113 (375)
T ss_pred hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCc
Confidence 45799999999999999999963 246689999997654444456788999999999 89999999999999999
Q ss_pred EEEEEEecCCCChhhhhhCCCC----------------------------------------------------------
Q 011005 277 MFLIYEYMERGSLFCNLHNNED---------------------------------------------------------- 298 (496)
Q Consensus 277 ~~lV~e~~~~g~L~~~l~~~~~---------------------------------------------------------- 298 (496)
.++||||+++|+|.+++.....
T Consensus 114 ~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (375)
T cd05104 114 TLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGS 193 (375)
T ss_pred ceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccce
Confidence 9999999999999998864321
Q ss_pred --------------CccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCCC
Q 011005 299 --------------AVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSN 364 (496)
Q Consensus 299 --------------~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 364 (496)
...+++..+..++.||+.||.||| +.+++||||||+||+++.++.+||+|||+++........
T Consensus 194 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~ 270 (375)
T cd05104 194 YIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIRNDSNY 270 (375)
T ss_pred ecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCchhhEEEECCCcEEEecCccceeccCcccc
Confidence 124788889999999999999999 789999999999999999999999999999866433221
Q ss_pred --ccccccccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHH
Q 011005 365 --RTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVI 441 (496)
Q Consensus 365 --~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (496)
.....++..|+|||.+.+..++.++||||||+++|||++ |..||..... .......+..........
T Consensus 271 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~-------~~~~~~~~~~~~~~~~~~--- 340 (375)
T cd05104 271 VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPV-------DSKFYKMIKEGYRMLSPE--- 340 (375)
T ss_pred cccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCc-------hHHHHHHHHhCccCCCCC---
Confidence 112334567999999999999999999999999999998 8888863211 111122222211111111
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHH
Q 011005 442 RDILLISTVSFACLQSNPKSRPTMQSVSQEFLI 474 (496)
Q Consensus 442 ~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~ 474 (496)
.....+.+++.+||+.||++|||+.|+++.+..
T Consensus 341 ~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~ 373 (375)
T cd05104 341 CAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQ 373 (375)
T ss_pred CCCHHHHHHHHHHccCChhHCcCHHHHHHHHHh
Confidence 112357899999999999999999999998763
No 74
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=1.8e-41 Score=325.24 Aligned_cols=264 Identities=24% Similarity=0.329 Sum_probs=196.2
Q ss_pred hCCCCcceeeecCCeeEEEEEeC--CCcEEEEEEcccchh-HHHHHHHHHHHHHHHhh---cccccccccceeec-----
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLP--NGKVFALKKLHTSEE-LAFIKSFKNEAQVLSQV---LHRNIVKLYGYCLH----- 273 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~--~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l---~h~niv~~~~~~~~----- 273 (496)
++|++.+.||+|+||+||+|... +++.||+|.+..... ......+.+|+.+++.+ +||||+++++++..
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~ 80 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 80 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence 36889999999999999999763 468899998865432 12224456778777776 59999999998852
Q ss_pred CCeEEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEcccc
Q 011005 274 KKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFG 353 (496)
Q Consensus 274 ~~~~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg 353 (496)
....++||||+. ++|.+++..... ..+++..+..++.|++.||.||| +.+++||||||+|||++.++.+||+|||
T Consensus 81 ~~~~~lv~e~~~-~~l~~~~~~~~~-~~~~~~~~~~i~~qi~~aL~~lH---~~~iiH~dlkp~Nil~~~~~~~kl~Dfg 155 (290)
T cd07862 81 ETKLTLVFEHVD-QDLTTYLDKVPE-PGVPTETIKDMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFG 155 (290)
T ss_pred CCcEEEEEccCC-CCHHHHHHhCCC-CCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEEcCCCCEEEcccc
Confidence 346899999996 589888875432 25789999999999999999999 7899999999999999999999999999
Q ss_pred ccccccCCCCCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCC---------CCCCcchh
Q 011005 354 TARLLHADSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSS---------SSDPKIML 424 (496)
Q Consensus 354 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~---------~~~~~~~~ 424 (496)
+++..... .......|++.|+|||.+.+..++.++||||+|+++|||++|++||........ ...+....
T Consensus 156 ~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~ 234 (290)
T cd07862 156 LARIYSFQ-MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWP 234 (290)
T ss_pred ceEeccCC-cccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhch
Confidence 99766433 223345689999999999999999999999999999999999999964321100 00000000
Q ss_pred ------HhhhcCCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHH
Q 011005 425 ------IDVLDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLI 474 (496)
Q Consensus 425 ------~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~ 474 (496)
..........+...........+.+++.+||+.||++|||+.|+++|+|+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~hp~f 290 (290)
T cd07862 235 RDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF 290 (290)
T ss_pred hhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhcCCCC
Confidence 00000000000000000112346789999999999999999999999885
No 75
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=3.2e-41 Score=333.52 Aligned_cols=256 Identities=25% Similarity=0.360 Sum_probs=199.8
Q ss_pred hCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccch--hHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEE
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIY 281 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~ 281 (496)
++|++.+.||+|+||+||+|... +++.||+|++.... .......+.+|+.++.+++|+||+++++.+.+....++||
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~ 80 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM 80 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence 47889999999999999999654 68899999997643 2233456788999999999999999999999999999999
Q ss_pred EecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCC
Q 011005 282 EYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHAD 361 (496)
Q Consensus 282 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 361 (496)
||++||+|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+++.....
T Consensus 81 E~~~gg~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~lH---~~givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~ 154 (363)
T cd05628 81 EFLPGGDMMTLLMKKD---TLTEEETQFYIAETVLAIDSIH---QLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKA 154 (363)
T ss_pred cCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---hCCeEecCCCHHHeEECCCCCEEEeeccCccccccc
Confidence 9999999999997653 6899999999999999999999 789999999999999999999999999998754321
Q ss_pred CC-----------------------------------CccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCC
Q 011005 362 SS-----------------------------------NRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKH 406 (496)
Q Consensus 362 ~~-----------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~ 406 (496)
.. .....+||+.|+|||++.+..++.++|||||||++|||++|+.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~ 234 (363)
T cd05628 155 HRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYP 234 (363)
T ss_pred ccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCC
Confidence 10 0123479999999999999999999999999999999999999
Q ss_pred CCccccccCCCCCCcchhHhhhcC--CCCCCCChhHHHHHHHHHHHHHhccc--CCCCCCCCHHHHHHHHHHhc
Q 011005 407 PRDILSSLSSSSDPKIMLIDVLDQ--RLPPPVDRKVIRDILLISTVSFACLQ--SNPKSRPTMQSVSQEFLITR 476 (496)
Q Consensus 407 p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~li~~cl~--~dP~~Rps~~evl~~~~~~~ 476 (496)
||.... .......+... .+..+..... ...+.+++.+++. .++..||+++|+++|+|+..
T Consensus 235 Pf~~~~-------~~~~~~~i~~~~~~~~~p~~~~~---s~~~~~li~~l~~~~~~r~~r~~~~ei~~hp~f~~ 298 (363)
T cd05628 235 PFCSET-------PQETYKKVMNWKETLIFPPEVPI---SEKAKDLILRFCCEWEHRIGAPGVEEIKTNPFFEG 298 (363)
T ss_pred CCCCCC-------HHHHHHHHHcCcCcccCCCcCCC---CHHHHHHHHHHcCChhhcCCCCCHHHHhCCCCCCC
Confidence 996321 11222222211 1111111001 1124456666443 23445799999999999854
No 76
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=1.9e-41 Score=329.62 Aligned_cols=248 Identities=23% Similarity=0.359 Sum_probs=201.3
Q ss_pred ceeeecCCeeEEEEEeC-CCcEEEEEEcccch--hHHHHHHHHHHHHHHHhh-cccccccccceeecCCeEEEEEEecCC
Q 011005 211 YCIGTGGYGSVYKAQLP-NGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQV-LHRNIVKLYGYCLHKKCMFLIYEYMER 286 (496)
Q Consensus 211 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lV~e~~~~ 286 (496)
+.||+|+||.||+|..+ +++.||+|.+.... .......+..|.++++.+ +||||+++++++..++..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 35899999999999765 57899999987643 223345567888888876 799999999999999999999999999
Q ss_pred CChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCCCcc
Q 011005 287 GSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRT 366 (496)
Q Consensus 287 g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 366 (496)
|+|...+.... .+++..+..++.||+.||.||| +.+|+||||||+||+++.++.++|+|||++...........
T Consensus 81 ~~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~ 154 (321)
T cd05591 81 GDLMFQIQRSR---KFDEPRSRFYAAEVTLALMFLH---RHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVTTT 154 (321)
T ss_pred CcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHeEECCCCCEEEeecccceecccCCcccc
Confidence 99998887554 6888999999999999999999 78999999999999999999999999999976543333344
Q ss_pred ccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHHHHHHH
Q 011005 367 LLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVIRDILL 446 (496)
Q Consensus 367 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (496)
...||+.|+|||++.+..++.++||||+|+++|+|++|+.||.... ...............+.. ....
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~-------~~~~~~~i~~~~~~~p~~-----~~~~ 222 (321)
T cd05591 155 TFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADN-------EDDLFESILHDDVLYPVW-----LSKE 222 (321)
T ss_pred ccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCC-------HHHHHHHHHcCCCCCCCC-----CCHH
Confidence 5678999999999999999999999999999999999999996322 122222222222211110 1124
Q ss_pred HHHHHHhcccCCCCCCC-------CHHHHHHHHHHhc
Q 011005 447 ISTVSFACLQSNPKSRP-------TMQSVSQEFLITR 476 (496)
Q Consensus 447 l~~li~~cl~~dP~~Rp-------s~~evl~~~~~~~ 476 (496)
+.+++.+||+.||++|| +++++++|+|+..
T Consensus 223 ~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~hp~~~~ 259 (321)
T cd05591 223 AVSILKAFMTKNPNKRLGCVASQGGEDAIKQHPFFKE 259 (321)
T ss_pred HHHHHHHHhccCHHHcCCCCCCCCCHHHHhcCCccCC
Confidence 67899999999999999 9999999999754
No 77
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.2e-42 Score=333.11 Aligned_cols=262 Identities=28% Similarity=0.436 Sum_probs=208.9
Q ss_pred HhCCCCcceeeecCCeeEEEEEeC--CC--cE-EEEEEccc--chhHHHHHHHHHHHHHHHhhcccccccccceeecCCe
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLP--NG--KV-FALKKLHT--SEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKC 276 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~--~~--~~-vavK~~~~--~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 276 (496)
.++..+.+.||+|+||.||+|.++ ++ .. ||||..+. ........++.+|+++|+.++|||||++||++.....
T Consensus 156 H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~P 235 (474)
T KOG0194|consen 156 HSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEP 235 (474)
T ss_pred ccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCc
Confidence 345566789999999999999654 23 23 89999885 2345567889999999999999999999999999999
Q ss_pred EEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccc
Q 011005 277 MFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTAR 356 (496)
Q Consensus 277 ~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~ 356 (496)
+++|||+|+||+|.++|.+... .++..++..++.+.+.||+||| +++++||||.++|+|++.++.+||+|||+++
T Consensus 236 l~ivmEl~~gGsL~~~L~k~~~--~v~~~ek~~~~~~AA~Gl~YLh---~k~~IHRDIAARNcL~~~~~~vKISDFGLs~ 310 (474)
T KOG0194|consen 236 LMLVMELCNGGSLDDYLKKNKK--SLPTLEKLRFCYDAARGLEYLH---SKNCIHRDIAARNCLYSKKGVVKISDFGLSR 310 (474)
T ss_pred cEEEEEecCCCcHHHHHHhCCC--CCCHHHHHHHHHHHHhHHHHHH---HCCCcchhHhHHHheecCCCeEEeCcccccc
Confidence 9999999999999999998764 6899999999999999999999 8899999999999999999999999999987
Q ss_pred cccCCCCCccccccccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccCCCCCCcchhHhhhcCCCCCC
Q 011005 357 LLHADSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSSDPKIMLIDVLDQRLPPP 435 (496)
Q Consensus 357 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (496)
.............-+..|+|||.+....|++++|||||||++||+++ |..||..... ......+.....+.+
T Consensus 311 ~~~~~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~-------~~v~~kI~~~~~r~~ 383 (474)
T KOG0194|consen 311 AGSQYVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKN-------YEVKAKIVKNGYRMP 383 (474)
T ss_pred CCcceeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCH-------HHHHHHHHhcCccCC
Confidence 65311111111224568999999999999999999999999999998 8889864332 222222322222222
Q ss_pred CChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCCC
Q 011005 436 VDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTPL 480 (496)
Q Consensus 436 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~~ 480 (496)
... ..+..+..++.+||..||++||||.++.+.+........
T Consensus 384 ~~~---~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~~ 425 (474)
T KOG0194|consen 384 IPS---KTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKKKE 425 (474)
T ss_pred CCC---CCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHhccc
Confidence 222 223346778889999999999999999998877666554
No 78
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=1.1e-41 Score=333.02 Aligned_cols=257 Identities=23% Similarity=0.353 Sum_probs=203.1
Q ss_pred CCCCcceeeecCCeeEEEEEe----CCCcEEEEEEcccch---hHHHHHHHHHHHHHHHhhc-ccccccccceeecCCeE
Q 011005 206 DFDIRYCIGTGGYGSVYKAQL----PNGKVFALKKLHTSE---ELAFIKSFKNEAQVLSQVL-HRNIVKLYGYCLHKKCM 277 (496)
Q Consensus 206 ~~~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~---~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~ 277 (496)
+|++.+.||+|+||.||++.. .+++.||+|.+.... .....+.+.+|+.+++.++ |+||+++++++...+..
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 478899999999999999965 358899999987532 2223456788999999994 99999999999999999
Q ss_pred EEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEcccccccc
Q 011005 278 FLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARL 357 (496)
Q Consensus 278 ~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 357 (496)
++||||+++|+|.+++.... .+++..+..++.||+.||.||| +.+|+||||||+|||++.++.+||+|||+++.
T Consensus 81 ~lv~e~~~~g~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH---~~~ivHrDlkp~Nili~~~~~~kl~DfG~~~~ 154 (332)
T cd05614 81 HLILDYVSGGEMFTHLYQRD---NFSEDEVRFYSGEIILALEHLH---KLGIVYRDIKLENILLDSEGHVVLTDFGLSKE 154 (332)
T ss_pred EEEEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---HCCcEecCCCHHHeEECCCCCEEEeeCcCCcc
Confidence 99999999999999987643 6889999999999999999999 78999999999999999999999999999986
Q ss_pred ccCCCC-CccccccccccccccccccC-CcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCC
Q 011005 358 LHADSS-NRTLLAGTYGYIAPELAYTM-VMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPP 435 (496)
Q Consensus 358 ~~~~~~-~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (496)
...... ......||+.|+|||++.+. .++.++|||||||++|||++|+.||...... .................+
T Consensus 155 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~---~~~~~~~~~~~~~~~~~~ 231 (332)
T cd05614 155 FLSEEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGER---NTQSEVSRRILKCDPPFP 231 (332)
T ss_pred ccccCCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCC---CCHHHHHHHHhcCCCCCC
Confidence 543322 22345789999999998875 4788999999999999999999999632211 111111111111111111
Q ss_pred CChhHHHHHHHHHHHHHhcccCCCCCCC-----CHHHHHHHHHHhc
Q 011005 436 VDRKVIRDILLISTVSFACLQSNPKSRP-----TMQSVSQEFLITR 476 (496)
Q Consensus 436 ~~~~~~~~~~~l~~li~~cl~~dP~~Rp-----s~~evl~~~~~~~ 476 (496)
. .....+.+++.+||+.||++|| +++++++|+|+..
T Consensus 232 --~---~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~ 272 (332)
T cd05614 232 --S---FIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEHPFFKG 272 (332)
T ss_pred --C---CCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcCCCcCC
Confidence 1 1122467899999999999999 8899999999864
No 79
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=4e-41 Score=325.78 Aligned_cols=267 Identities=19% Similarity=0.237 Sum_probs=203.3
Q ss_pred hCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEe
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEY 283 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~ 283 (496)
++|.+.+.||+|+||.||+|..+ +++.||+|.+...........+.+|+.++++++||||+++++++..++..++||||
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 85 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEY 85 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeC
Confidence 56889999999999999999765 67889999987544333334577899999999999999999999999999999999
Q ss_pred cCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCC
Q 011005 284 MERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSS 363 (496)
Q Consensus 284 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 363 (496)
+++ +|.+++.... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++........
T Consensus 86 ~~~-~l~~~~~~~~--~~~~~~~~~~~~~qi~~aL~~lH---~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~ 159 (309)
T cd07872 86 LDK-DLKQYMDDCG--NIMSMHNVKIFLYQILRGLAYCH---RRKVLHRDLKPQNLLINERGELKLADFGLARAKSVPTK 159 (309)
T ss_pred CCC-CHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEECccccceecCCCcc
Confidence 975 8887776543 25788999999999999999999 78999999999999999999999999999976544333
Q ss_pred Ccccccccccccccccccc-CCcCcccchhhHHHHHHHHHhCCCCCccccccCC---------CCCCcc-----hhHhhh
Q 011005 364 NRTLLAGTYGYIAPELAYT-MVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSS---------SSDPKI-----MLIDVL 428 (496)
Q Consensus 364 ~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~---------~~~~~~-----~~~~~~ 428 (496)
......+++.|+|||.+.+ ..++.++||||+|+++|+|++|+.||........ ...... ......
T Consensus 160 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (309)
T cd07872 160 TYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFK 239 (309)
T ss_pred ccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhhh
Confidence 3344567899999998865 4688999999999999999999999963321000 000000 000000
Q ss_pred cCCCCCCCC----hhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhcc
Q 011005 429 DQRLPPPVD----RKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRK 477 (496)
Q Consensus 429 ~~~~~~~~~----~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~ 477 (496)
....+.... .........+.+++.+||+.||++|||++|+++|+|+..-
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~ 292 (309)
T cd07872 240 NYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHAYFRSL 292 (309)
T ss_pred hhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcChhhhhc
Confidence 000000000 0000112346789999999999999999999999999864
No 80
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=2.1e-41 Score=335.13 Aligned_cols=259 Identities=25% Similarity=0.325 Sum_probs=205.9
Q ss_pred HhCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccch--hHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEE
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLI 280 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV 280 (496)
.++|++.+.||+|+||.||+|..+ +++.||+|.+.... .......+.+|+.+++.++||||+++++++..++..++|
T Consensus 42 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~lv 121 (370)
T cd05596 42 AEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYMV 121 (370)
T ss_pred HHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEEE
Confidence 467999999999999999999765 68899999986532 122334577899999999999999999999999999999
Q ss_pred EEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccC
Q 011005 281 YEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHA 360 (496)
Q Consensus 281 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 360 (496)
|||+++|+|.+++... .++...+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||++.....
T Consensus 122 ~Ey~~gg~L~~~l~~~----~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~ 194 (370)
T cd05596 122 MEYMPGGDLVNLMSNY----DIPEKWARFYTAEVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDA 194 (370)
T ss_pred EcCCCCCcHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEEcCCCCEEEEeccceeeccC
Confidence 9999999999988653 4788888899999999999999 78999999999999999999999999999987643
Q ss_pred CCC-CccccccccccccccccccC----CcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCC
Q 011005 361 DSS-NRTLLAGTYGYIAPELAYTM----VMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPP 435 (496)
Q Consensus 361 ~~~-~~~~~~gt~~y~aPE~~~~~----~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (496)
... ......||+.|+|||++.+. .++.++|||||||++|||++|+.||.... .......+........
T Consensus 195 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~-------~~~~~~~i~~~~~~~~ 267 (370)
T cd05596 195 NGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADS-------LVGTYSKIMDHKNSLT 267 (370)
T ss_pred CCcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCC-------HHHHHHHHHcCCCcCC
Confidence 322 22345799999999998653 47889999999999999999999996322 1122223322211111
Q ss_pred CChhHHHHHHHHHHHHHhcccCCCCC--CCCHHHHHHHHHHhcc
Q 011005 436 VDRKVIRDILLISTVSFACLQSNPKS--RPTMQSVSQEFLITRK 477 (496)
Q Consensus 436 ~~~~~~~~~~~l~~li~~cl~~dP~~--Rps~~evl~~~~~~~~ 477 (496)
... .......+.+++.+||+.+|.+ |+|++|+++|+|+...
T Consensus 268 ~~~-~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h~~~~~~ 310 (370)
T cd05596 268 FPD-DIEISKQAKDLICAFLTDREVRLGRNGVDEIKSHPFFKND 310 (370)
T ss_pred CCC-cCCCCHHHHHHHHHHccChhhccCCCCHHHHhcCcccCCC
Confidence 111 0011234678999999999988 9999999999998753
No 81
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=4.1e-41 Score=326.33 Aligned_cols=248 Identities=25% Similarity=0.369 Sum_probs=196.6
Q ss_pred ceeeecCCeeEEEEEeC-CCcEEEEEEcccch--hHHHHHHHHHHHHHHHhh-cccccccccceeecCCeEEEEEEecCC
Q 011005 211 YCIGTGGYGSVYKAQLP-NGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQV-LHRNIVKLYGYCLHKKCMFLIYEYMER 286 (496)
Q Consensus 211 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lV~e~~~~ 286 (496)
+.||+|+||.||+|... +++.||+|.++... .....+....|..++... +||||+++++++..++..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 36999999999999764 57889999987643 122334456677777654 799999999999999999999999999
Q ss_pred CChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCCCcc
Q 011005 287 GSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRT 366 (496)
Q Consensus 287 g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 366 (496)
|+|..++.... .++...+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||+++..........
T Consensus 81 g~L~~~~~~~~---~~~~~~~~~~~~qi~~al~~LH---~~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~~~~~ 154 (316)
T cd05592 81 GDLMFHIQSSG---RFDEARARFYAAEIICGLQFLH---KKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGKAS 154 (316)
T ss_pred CcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---HCCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCCCccc
Confidence 99999887643 6889999999999999999999 78999999999999999999999999999976543333344
Q ss_pred ccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHHHHHHH
Q 011005 367 LLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVIRDILL 446 (496)
Q Consensus 367 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (496)
..+||+.|+|||++.+..++.++||||+||++|||++|+.||.... .......+.......+. .....
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~-------~~~~~~~i~~~~~~~~~-----~~~~~ 222 (316)
T cd05592 155 TFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGED-------EDELFDSILNDRPHFPR-----WISKE 222 (316)
T ss_pred cccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCC-------HHHHHHHHHcCCCCCCC-----CCCHH
Confidence 5679999999999999999999999999999999999999996321 11112222221111111 01224
Q ss_pred HHHHHHhcccCCCCCCCCH-HHHHHHHHHhc
Q 011005 447 ISTVSFACLQSNPKSRPTM-QSVSQEFLITR 476 (496)
Q Consensus 447 l~~li~~cl~~dP~~Rps~-~evl~~~~~~~ 476 (496)
+.+++.+||+.||++||++ .++++|+|+..
T Consensus 223 ~~~ll~~~l~~~P~~R~~~~~~l~~h~~~~~ 253 (316)
T cd05592 223 AKDCLSKLFERDPTKRLGVDGDIRQHPFFRG 253 (316)
T ss_pred HHHHHHHHccCCHHHcCCChHHHHcCcccCC
Confidence 6788999999999999986 47888888754
No 82
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=1.6e-41 Score=337.51 Aligned_cols=255 Identities=25% Similarity=0.346 Sum_probs=201.8
Q ss_pred hCCCCcceeeecCCeeEEEEEe-CCCcEEEEEEcccch--hHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEE
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIY 281 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~ 281 (496)
++|.+.+.||+|+||+||+|.. .+++.||+|.+.... .....+.+.+|++++++++||||+++++++.++...++||
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM 80 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence 4688999999999999999965 478999999986543 2334467889999999999999999999999999999999
Q ss_pred EecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCC
Q 011005 282 EYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHAD 361 (496)
Q Consensus 282 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 361 (496)
||+++|+|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.++|+|||+++.+...
T Consensus 81 E~~~gg~L~~~l~~~~---~~~~~~~~~~~~ql~~aL~~LH---~~givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~ 154 (377)
T cd05629 81 EFLPGGDLMTMLIKYD---TFSEDVTRFYMAECVLAIEAVH---KLGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQ 154 (377)
T ss_pred eCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHEEECCCCCEEEeecccccccccc
Confidence 9999999999987643 6788999999999999999999 789999999999999999999999999999643211
Q ss_pred CC-----------------------------------------------CccccccccccccccccccCCcCcccchhhH
Q 011005 362 SS-----------------------------------------------NRTLLAGTYGYIAPELAYTMVMTEKCDVYSF 394 (496)
Q Consensus 362 ~~-----------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dvwsl 394 (496)
.. .....+||+.|+|||++.+..++.++||||+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSl 234 (377)
T cd05629 155 HDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSL 234 (377)
T ss_pred cccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEec
Confidence 00 0012468999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCccccccCCCCCCcchhHhhhc--CCCCCCCChhHHHHHHHHHHHHHhcccCCCCCC---CCHHHHH
Q 011005 395 GVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLD--QRLPPPVDRKVIRDILLISTVSFACLQSNPKSR---PTMQSVS 469 (496)
Q Consensus 395 G~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R---ps~~evl 469 (496)
||++|||++|+.||.... .......... ..+..+... .....+.+++.+|+. +|.+| +++.|++
T Consensus 235 Gvil~elltG~~Pf~~~~-------~~~~~~~i~~~~~~~~~p~~~---~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l 303 (377)
T cd05629 235 GAIMFECLIGWPPFCSEN-------SHETYRKIINWRETLYFPDDI---HLSVEAEDLIRRLIT-NAENRLGRGGAHEIK 303 (377)
T ss_pred chhhhhhhcCCCCCCCCC-------HHHHHHHHHccCCccCCCCCC---CCCHHHHHHHHHHhc-CHhhcCCCCCHHHHh
Confidence 999999999999996322 1111112211 111111110 111246788999997 66665 5999999
Q ss_pred HHHHHhc
Q 011005 470 QEFLITR 476 (496)
Q Consensus 470 ~~~~~~~ 476 (496)
+|+|+..
T Consensus 304 ~hp~~~~ 310 (377)
T cd05629 304 SHPFFRG 310 (377)
T ss_pred cCCCcCC
Confidence 9999864
No 83
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=4.4e-41 Score=333.06 Aligned_cols=258 Identities=26% Similarity=0.395 Sum_probs=202.6
Q ss_pred HhCCCCcceeeecCCeeEEEEEeC------CCcEEEEEEcccchhHHHHHHHHHHHHHHHhh-cccccccccceeecCCe
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLP------NGKVFALKKLHTSEELAFIKSFKNEAQVLSQV-LHRNIVKLYGYCLHKKC 276 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~ 276 (496)
.++|++.+.||+|+||.||+|... ++..||+|+++..........+.+|+.+++.+ +|+||+++++++...+.
T Consensus 37 ~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~~ 116 (374)
T cd05106 37 RDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGGP 116 (374)
T ss_pred HHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCCC
Confidence 467999999999999999998642 34579999997654444456788999999999 89999999999999999
Q ss_pred EEEEEEecCCCChhhhhhCCCC----------------------------------------------------------
Q 011005 277 MFLIYEYMERGSLFCNLHNNED---------------------------------------------------------- 298 (496)
Q Consensus 277 ~~lV~e~~~~g~L~~~l~~~~~---------------------------------------------------------- 298 (496)
.++||||+++|+|.+++.....
T Consensus 117 ~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (374)
T cd05106 117 VLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSD 196 (374)
T ss_pred eEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccccccc
Confidence 9999999999999988854211
Q ss_pred ---------CccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCCC--ccc
Q 011005 299 ---------AVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSN--RTL 367 (496)
Q Consensus 299 ---------~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~--~~~ 367 (496)
...+++..+++++.||+.||+||| +++++||||||+||++++++.++|+|||+++........ ...
T Consensus 197 ~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH---~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~~ 273 (374)
T cd05106 197 SKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLA---SKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGN 273 (374)
T ss_pred ccchhccCCCCCcCHHHHHHHHHHHHHHHHHHH---HCCEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeeccC
Confidence 124788889999999999999999 789999999999999999999999999999765433211 112
Q ss_pred cccccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHHHHHHH
Q 011005 368 LAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVIRDILL 446 (496)
Q Consensus 368 ~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (496)
..+++.|+|||++.+..++.++||||||+++|||++ |+.||..... .................. .....
T Consensus 274 ~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~-------~~~~~~~~~~~~~~~~~~---~~~~~ 343 (374)
T cd05106 274 ARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILV-------NSKFYKMVKRGYQMSRPD---FAPPE 343 (374)
T ss_pred CCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccc-------cHHHHHHHHcccCccCCC---CCCHH
Confidence 234567999999999999999999999999999997 9999864221 111222222211111111 01235
Q ss_pred HHHHHHhcccCCCCCCCCHHHHHHHHHH
Q 011005 447 ISTVSFACLQSNPKSRPTMQSVSQEFLI 474 (496)
Q Consensus 447 l~~li~~cl~~dP~~Rps~~evl~~~~~ 474 (496)
+.+++.+||+.||++|||+.++++.+..
T Consensus 344 l~~li~~cl~~dp~~RPs~~~l~~~l~~ 371 (374)
T cd05106 344 IYSIMKMCWNLEPTERPTFSQISQLIQR 371 (374)
T ss_pred HHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 7789999999999999999999998754
No 84
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=3.1e-41 Score=328.42 Aligned_cols=248 Identities=25% Similarity=0.346 Sum_probs=197.4
Q ss_pred ceeeecCCeeEEEEEeC-CCcEEEEEEcccchh--HHHHHHHHHHHH-HHHhhcccccccccceeecCCeEEEEEEecCC
Q 011005 211 YCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEE--LAFIKSFKNEAQ-VLSQVLHRNIVKLYGYCLHKKCMFLIYEYMER 286 (496)
Q Consensus 211 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~-~l~~l~h~niv~~~~~~~~~~~~~lV~e~~~~ 286 (496)
+.||+|+||+||+|..+ +|+.||+|.+..... ......+..|.. +++.++||||+++++++..++..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence 36999999999999764 689999999875431 122234445544 56778999999999999999999999999999
Q ss_pred CChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCCCcc
Q 011005 287 GSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRT 366 (496)
Q Consensus 287 g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 366 (496)
|+|..++.... .+++..+..++.||+.||.||| +.+|+||||||+|||++.++.+||+|||+++..........
T Consensus 81 g~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH---~~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~ 154 (323)
T cd05575 81 GELFFHLQRER---SFPEPRARFYAAEIASALGYLH---SLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSKTTS 154 (323)
T ss_pred CCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCCHHHeEECCCCcEEEeccCCCcccccCCCccc
Confidence 99999887643 6788999999999999999999 78999999999999999999999999999976443333344
Q ss_pred ccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHHHHHHH
Q 011005 367 LLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVIRDILL 446 (496)
Q Consensus 367 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (496)
...||+.|+|||++.+..++.++|||||||++|+|++|+.||.... .................. ....
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~-------~~~~~~~i~~~~~~~~~~-----~~~~ 222 (323)
T cd05575 155 TFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRD-------TAEMYDNILNKPLRLKPN-----ISVS 222 (323)
T ss_pred cccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCC-------HHHHHHHHHcCCCCCCCC-----CCHH
Confidence 5678999999999999999999999999999999999999986321 112222222222211111 1234
Q ss_pred HHHHHHhcccCCCCCCCCH----HHHHHHHHHhc
Q 011005 447 ISTVSFACLQSNPKSRPTM----QSVSQEFLITR 476 (496)
Q Consensus 447 l~~li~~cl~~dP~~Rps~----~evl~~~~~~~ 476 (496)
+.+++.+||+.||++||++ .|+++|+|+..
T Consensus 223 ~~~li~~~l~~~p~~R~~~~~~~~~il~~~~~~~ 256 (323)
T cd05575 223 ARHLLEGLLQKDRTKRLGAKDDFLEIKNHVFFSS 256 (323)
T ss_pred HHHHHHHHhhcCHHhCCCCCCCHHHHHcCCCcCC
Confidence 6789999999999999987 69999988743
No 85
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=4.2e-41 Score=326.68 Aligned_cols=248 Identities=23% Similarity=0.351 Sum_probs=201.6
Q ss_pred ceeeecCCeeEEEEEeC-CCcEEEEEEcccch--hHHHHHHHHHHHHHHHhh-cccccccccceeecCCeEEEEEEecCC
Q 011005 211 YCIGTGGYGSVYKAQLP-NGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQV-LHRNIVKLYGYCLHKKCMFLIYEYMER 286 (496)
Q Consensus 211 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lV~e~~~~ 286 (496)
+.||+|+||+||+|.++ +++.||+|.++... .......+.+|..+++.+ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 36999999999999765 57899999987643 223345677888999888 699999999999999999999999999
Q ss_pred CChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCCCcc
Q 011005 287 GSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRT 366 (496)
Q Consensus 287 g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 366 (496)
|+|...+.... .+++..+..++.|++.||.||| +.+++||||||+||+++.++.++|+|||+++..........
T Consensus 81 ~~L~~~~~~~~---~l~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 154 (318)
T cd05570 81 GDLMFHIQRSG---RFDEPRARFYAAEIVLGLQFLH---ERGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVTTS 154 (318)
T ss_pred CCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---hCCeEccCCCHHHeEECCCCcEEecccCCCeecCcCCCccc
Confidence 99998887654 6899999999999999999999 78999999999999999999999999999875433333334
Q ss_pred ccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHHHHHHH
Q 011005 367 LLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVIRDILL 446 (496)
Q Consensus 367 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (496)
..+|++.|+|||++.+..++.++||||+||++|+|++|+.||.... ...............+. .....
T Consensus 155 ~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~-------~~~~~~~i~~~~~~~~~-----~~~~~ 222 (318)
T cd05570 155 TFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDD-------EDELFQSILEDEVRYPR-----WLSKE 222 (318)
T ss_pred ceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCC-------HHHHHHHHHcCCCCCCC-----cCCHH
Confidence 4578999999999999999999999999999999999999996322 11112222222221111 11234
Q ss_pred HHHHHHhcccCCCCCCCCH-----HHHHHHHHHhc
Q 011005 447 ISTVSFACLQSNPKSRPTM-----QSVSQEFLITR 476 (496)
Q Consensus 447 l~~li~~cl~~dP~~Rps~-----~evl~~~~~~~ 476 (496)
+.+++.+||+.||++|||+ .++++|+|+..
T Consensus 223 ~~~li~~~l~~dP~~R~s~~~~~~~~ll~~~~~~~ 257 (318)
T cd05570 223 AKSILKSFLTKNPEKRLGCLPTGEQDIKGHPFFRE 257 (318)
T ss_pred HHHHHHHHccCCHHHcCCCCCCCHHHHhcCCCcCC
Confidence 6789999999999999999 99999999865
No 86
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-41 Score=325.69 Aligned_cols=263 Identities=24% Similarity=0.329 Sum_probs=212.3
Q ss_pred HhCCCCcceeeecCCeeEEEEEeCCCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEe
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEY 283 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~ 283 (496)
.+...+.++||+|-||+|..+...++..||||+++.........+|.+|+++|.+++||||+.++|.|..++.+++|+||
T Consensus 537 Rs~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~EY 616 (807)
T KOG1094|consen 537 RSRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITEY 616 (807)
T ss_pred hhheehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHHH
Confidence 35567788999999999999999888999999999988878889999999999999999999999999999999999999
Q ss_pred cCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCC
Q 011005 284 MERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSS 363 (496)
Q Consensus 284 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 363 (496)
|++|+|.+++.++... ...-....+|+.||+.|++||. +.++||||+.++|+|++.++++||+|||+++.+-....
T Consensus 617 mEnGDLnqFl~aheap-t~~t~~~vsi~tqiasgmaYLe---s~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~y 692 (807)
T KOG1094|consen 617 MENGDLNQFLSAHELP-TAETAPGVSICTQIASGMAYLE---SLNFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDY 692 (807)
T ss_pred HhcCcHHHHHHhccCc-ccccchhHHHHHHHHHHHHHHH---hhchhhccccccceeecCcccEEecCcccccccccCCc
Confidence 9999999999987433 2455666789999999999999 78999999999999999999999999999985533322
Q ss_pred C--ccccccccccccccccccCCcCcccchhhHHHHHHHHHh--CCCCCccccccCCCCCCcchhHhhhcCCCCCCCChh
Q 011005 364 N--RTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM--GKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRK 439 (496)
Q Consensus 364 ~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~--g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 439 (496)
. ....+-+.+|||||.+.-++++.++|||+||+++||+++ ...||..+...+ ......++.+..-.......
T Consensus 693 y~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~----vven~~~~~~~~~~~~~l~~ 768 (807)
T KOG1094|consen 693 YRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQ----VVENAGEFFRDQGRQVVLSR 768 (807)
T ss_pred eeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHH----HHHhhhhhcCCCCcceeccC
Confidence 1 223456789999999999999999999999999999875 678886543211 11111222222222212222
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHH
Q 011005 440 VIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLI 474 (496)
Q Consensus 440 ~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~ 474 (496)
+...+..+.+++.+||..|.++|||++++..++..
T Consensus 769 P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~ 803 (807)
T KOG1094|consen 769 PPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQE 803 (807)
T ss_pred CCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHH
Confidence 23334457799999999999999999999877754
No 87
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=4.5e-41 Score=326.02 Aligned_cols=248 Identities=23% Similarity=0.340 Sum_probs=197.6
Q ss_pred ceeeecCCeeEEEEEeC-CCcEEEEEEcccchh--HHHHHHHHHHHHHHHhh-cccccccccceeecCCeEEEEEEecCC
Q 011005 211 YCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEE--LAFIKSFKNEAQVLSQV-LHRNIVKLYGYCLHKKCMFLIYEYMER 286 (496)
Q Consensus 211 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lV~e~~~~ 286 (496)
+.||+|+||.||+|.++ +|+.||+|.++.... .........|..++... +||||+++++++..++..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 36999999999999765 688999999976431 12334566778887765 799999999999999999999999999
Q ss_pred CChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCCCcc
Q 011005 287 GSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRT 366 (496)
Q Consensus 287 g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 366 (496)
|+|..++.... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.++|+|||+++..........
T Consensus 81 g~L~~~i~~~~---~~~~~~~~~~~~qi~~~l~~lH---~~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 154 (316)
T cd05620 81 GDLMFHIQDKG---RFDLYRATFYAAEIVCGLQFLH---SKGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNRAS 154 (316)
T ss_pred CcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHeEECCCCCEEeCccCCCeecccCCCcee
Confidence 99998887643 6788999999999999999999 78999999999999999999999999999875433333344
Q ss_pred ccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHHHHHHH
Q 011005 367 LLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVIRDILL 446 (496)
Q Consensus 367 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (496)
..+||+.|+|||++.+..++.++||||+|+++|||++|+.||.... ...............+. .....
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~-------~~~~~~~~~~~~~~~~~-----~~~~~ 222 (316)
T cd05620 155 TFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDD-------EDELFESIRVDTPHYPR-----WITKE 222 (316)
T ss_pred ccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCC-------HHHHHHHHHhCCCCCCC-----CCCHH
Confidence 5678999999999999999999999999999999999999996321 11111111111111111 01124
Q ss_pred HHHHHHhcccCCCCCCCCH-HHHHHHHHHhc
Q 011005 447 ISTVSFACLQSNPKSRPTM-QSVSQEFLITR 476 (496)
Q Consensus 447 l~~li~~cl~~dP~~Rps~-~evl~~~~~~~ 476 (496)
+.+++.+||+.||++||++ +++++|+|+..
T Consensus 223 ~~~li~~~l~~dP~~R~~~~~~~~~h~~f~~ 253 (316)
T cd05620 223 SKDILEKLFERDPTRRLGVVGNIRGHPFFKT 253 (316)
T ss_pred HHHHHHHHccCCHHHcCCChHHHHcCCCcCC
Confidence 6789999999999999997 58888998865
No 88
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=2.7e-41 Score=336.52 Aligned_cols=254 Identities=22% Similarity=0.326 Sum_probs=200.3
Q ss_pred CCCCcceeeecCCeeEEEEEe-CCCcEEEEEEcccch--hHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEE
Q 011005 206 DFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYE 282 (496)
Q Consensus 206 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e 282 (496)
.|++.+.||+|+||+||+|.. .+++.||+|.+.... .......+.+|+.++++++|+||+++++.+..++..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E 81 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 81 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence 588899999999999999975 468899999987643 22344678899999999999999999999999999999999
Q ss_pred ecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCC
Q 011005 283 YMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADS 362 (496)
Q Consensus 283 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 362 (496)
|+++|+|.+++.... .++...+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||++..+....
T Consensus 82 ~~~gg~L~~~l~~~~---~~~e~~~~~~~~qi~~al~~lH---~~~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~ 155 (382)
T cd05625 82 YIPGGDMMSLLIRMG---IFPEDLARFYIAELTCAVESVH---KMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTH 155 (382)
T ss_pred CCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEEeECCCCccccccc
Confidence 999999999987643 5788889999999999999999 7899999999999999999999999999975331100
Q ss_pred -----------------------------------------------CCccccccccccccccccccCCcCcccchhhHH
Q 011005 363 -----------------------------------------------SNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFG 395 (496)
Q Consensus 363 -----------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG 395 (496)
......+||+.|+|||++.+..++.++||||+|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG 235 (382)
T cd05625 156 DSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVG 235 (382)
T ss_pred cccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEech
Confidence 001124689999999999999999999999999
Q ss_pred HHHHHHHhCCCCCccccccCCCCCCcchhHhhhc--CCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCC---HHHHHH
Q 011005 396 VVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLD--QRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPT---MQSVSQ 470 (496)
Q Consensus 396 ~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps---~~evl~ 470 (496)
|++|||++|+.||.... .......... .....+... .......+++.+|+ .+|++|++ ++|+++
T Consensus 236 vil~elltG~~Pf~~~~-------~~~~~~~i~~~~~~~~~p~~~---~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~ 304 (382)
T cd05625 236 VILYEMLVGQPPFLAQT-------PLETQMKVINWQTSLHIPPQA---KLSPEASDLIIKLC-RGPEDRLGKNGADEIKA 304 (382)
T ss_pred HHHHHHHhCCCCCCCCC-------HHHHHHHHHccCCCcCCCCcc---cCCHHHHHHHHHHc-cCHhHcCCCCCHHHHhc
Confidence 99999999999996322 1111222221 111111111 11123556777765 59999997 999999
Q ss_pred HHHHhc
Q 011005 471 EFLITR 476 (496)
Q Consensus 471 ~~~~~~ 476 (496)
|+|+..
T Consensus 305 hp~f~~ 310 (382)
T cd05625 305 HPFFKT 310 (382)
T ss_pred CCCcCC
Confidence 999865
No 89
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=2.5e-41 Score=334.10 Aligned_cols=258 Identities=25% Similarity=0.353 Sum_probs=204.3
Q ss_pred HHhCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccch--hHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEE
Q 011005 203 ATEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFL 279 (496)
Q Consensus 203 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 279 (496)
..++|++.+.||+|+||.||+|..+ +++.||+|.+.... .......+.+|+.+++.++||||+++++++..+...++
T Consensus 41 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~l 120 (370)
T cd05621 41 KAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYM 120 (370)
T ss_pred CHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEE
Confidence 3578999999999999999999765 58899999986532 22234567889999999999999999999999999999
Q ss_pred EEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEcccccccccc
Q 011005 280 IYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLH 359 (496)
Q Consensus 280 V~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 359 (496)
||||+++|+|.+++... .++...+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||++....
T Consensus 121 v~Ey~~gg~L~~~l~~~----~~~~~~~~~~~~qil~aL~~LH---~~~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~ 193 (370)
T cd05621 121 VMEYMPGGDLVNLMSNY----DVPEKWAKFYTAEVVLALDAIH---SMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMD 193 (370)
T ss_pred EEcCCCCCcHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHEEECCCCCEEEEecccceecc
Confidence 99999999999998653 4788889999999999999999 7899999999999999999999999999998764
Q ss_pred CCCC-CccccccccccccccccccCC----cCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCC--C
Q 011005 360 ADSS-NRTLLAGTYGYIAPELAYTMV----MTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQR--L 432 (496)
Q Consensus 360 ~~~~-~~~~~~gt~~y~aPE~~~~~~----~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~--~ 432 (496)
.... .....+||+.|+|||++.+.. ++.++||||+||++|+|++|+.||.... .......+.... +
T Consensus 194 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~-------~~~~~~~i~~~~~~~ 266 (370)
T cd05621 194 ETGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADS-------LVGTYSKIMDHKNSL 266 (370)
T ss_pred cCCceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCC-------HHHHHHHHHhCCccc
Confidence 3322 223467999999999987643 7789999999999999999999996322 111222232221 1
Q ss_pred CCCCChhHHHHHHHHHHHHHhcccCCCCC--CCCHHHHHHHHHHhcc
Q 011005 433 PPPVDRKVIRDILLISTVSFACLQSNPKS--RPTMQSVSQEFLITRK 477 (496)
Q Consensus 433 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~--Rps~~evl~~~~~~~~ 477 (496)
..+.. ......+.+++.+|+..+|.+ |+++.|+++|+|+...
T Consensus 267 ~~p~~---~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~hp~~~~~ 310 (370)
T cd05621 267 NFPED---VEISKHAKNLICAFLTDREVRLGRNGVEEIKQHPFFKND 310 (370)
T ss_pred CCCCc---ccCCHHHHHHHHHHccCchhccCCCCHHHHhcCcccCCC
Confidence 11111 111224567888999865544 8999999999999763
No 90
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=6e-41 Score=326.75 Aligned_cols=255 Identities=23% Similarity=0.355 Sum_probs=201.9
Q ss_pred ceeeecCCeeEEEEEeC-CCcEEEEEEcccch--hHHHHHHHHHHHHHHHhh-cccccccccceeecCCeEEEEEEecCC
Q 011005 211 YCIGTGGYGSVYKAQLP-NGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQV-LHRNIVKLYGYCLHKKCMFLIYEYMER 286 (496)
Q Consensus 211 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lV~e~~~~ 286 (496)
+.||+|+||.||+|... +++.||+|.+.... .....+.+.+|+.++.++ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 36999999999999764 67899999997643 223445678899999888 599999999999999999999999999
Q ss_pred CChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCCCcc
Q 011005 287 GSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRT 366 (496)
Q Consensus 287 g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 366 (496)
|+|..++.... .+++..+..++.|++.||+||| +.+++||||||+||+++.++.+||+|||+++..........
T Consensus 81 ~~L~~~~~~~~---~l~~~~~~~~~~qi~~al~~lH---~~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~ 154 (327)
T cd05617 81 GDLMFHMQRQR---KLPEEHARFYAAEICIALNFLH---ERGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDTTS 154 (327)
T ss_pred CcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEEeCCCCEEEeccccceeccCCCCcee
Confidence 99998887543 6899999999999999999999 78999999999999999999999999999975433333344
Q ss_pred ccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHHHHHHH
Q 011005 367 LLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVIRDILL 446 (496)
Q Consensus 367 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (496)
..+||+.|+|||++.+..++.++||||+|+++|+|++|+.||..........................+.. ....
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-----~~~~ 229 (327)
T cd05617 155 TFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKPIRIPRF-----LSVK 229 (327)
T ss_pred cccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCCCCCCCC-----CCHH
Confidence 56799999999999999999999999999999999999999964322111111111112222222111111 1124
Q ss_pred HHHHHHhcccCCCCCCCC------HHHHHHHHHHhc
Q 011005 447 ISTVSFACLQSNPKSRPT------MQSVSQEFLITR 476 (496)
Q Consensus 447 l~~li~~cl~~dP~~Rps------~~evl~~~~~~~ 476 (496)
+.+++.+||+.||++|++ +.++++|+|+..
T Consensus 230 ~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h~~f~~ 265 (327)
T cd05617 230 ASHVLKGFLNKDPKERLGCQPQTGFSDIKSHTFFRS 265 (327)
T ss_pred HHHHHHHHhccCHHHcCCCCCCCCHHHHHcCCCCCC
Confidence 678999999999999998 579999998754
No 91
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=2.6e-42 Score=340.37 Aligned_cols=272 Identities=30% Similarity=0.470 Sum_probs=224.7
Q ss_pred CccccHHHHHHHHhC---------CCCcceeeecCCeeEEEEEeC----CCcEEEEEEcccchhHHHHHHHHHHHHHHHh
Q 011005 192 DGRIVYEDLIEATED---------FDIRYCIGTGGYGSVYKAQLP----NGKVFALKKLHTSEELAFIKSFKNEAQVLSQ 258 (496)
Q Consensus 192 ~~~~~~~~~~~~~~~---------~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~ 258 (496)
....+|||.-++... ..+.+.||.|.||.||+|+++ ....||||.++....+....+|..|+.||.+
T Consensus 607 iDP~TYEDPnqAvreFakEId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQ 686 (996)
T KOG0196|consen 607 IDPHTYEDPNQAVREFAKEIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQ 686 (996)
T ss_pred cCCccccCccHHHHHhhhhcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhccc
Confidence 344566666555433 446778999999999999765 2457999999998877778899999999999
Q ss_pred hcccccccccceeecCCeEEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCc
Q 011005 259 VLHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNN 338 (496)
Q Consensus 259 l~h~niv~~~~~~~~~~~~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~N 338 (496)
++||||+++.|.....+..+||+|||++|+|+.+|..+. .+|++.+...+.++|+.|+.||. +.++|||||.++|
T Consensus 687 FdHPNIIrLEGVVTks~PvMIiTEyMENGsLDsFLR~~D--GqftviQLVgMLrGIAsGMkYLs---dm~YVHRDLAARN 761 (996)
T KOG0196|consen 687 FDHPNIIRLEGVVTKSKPVMIITEYMENGSLDSFLRQND--GQFTVIQLVGMLRGIASGMKYLS---DMNYVHRDLAARN 761 (996)
T ss_pred CCCCcEEEEEEEEecCceeEEEhhhhhCCcHHHHHhhcC--CceEeehHHHHHHHHHHHhHHHh---hcCchhhhhhhhh
Confidence 999999999999999999999999999999999998765 36999999999999999999999 7899999999999
Q ss_pred eEecCCCCeEEccccccccccCCCCC-cccccc--ccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCcccccc
Q 011005 339 ILLNSKLEAFVADFGTARLLHADSSN-RTLLAG--TYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSL 414 (496)
Q Consensus 339 il~~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~g--t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~ 414 (496)
||++.+..+|++|||+++.+.++... .+...| +.+|.|||.+.-.+++.+|||||+|++|||.++ |..||...+.
T Consensus 762 ILVNsnLvCKVsDFGLSRvledd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSN- 840 (996)
T KOG0196|consen 762 ILVNSNLVCKVSDFGLSRVLEDDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN- 840 (996)
T ss_pred eeeccceEEEeccccceeecccCCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccch-
Confidence 99999999999999999988666533 222223 358999999999999999999999999999775 9999864321
Q ss_pred CCCCCCcchhHhhhcCCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCC
Q 011005 415 SSSSDPKIMLIDVLDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTP 479 (496)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~ 479 (496)
.+....-..+.++|++.+. +..+.+|+..||++|-.+||++.|++..+--.-+.|
T Consensus 841 -----QdVIkaIe~gyRLPpPmDC-----P~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIrnP 895 (996)
T KOG0196|consen 841 -----QDVIKAIEQGYRLPPPMDC-----PAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIRNP 895 (996)
T ss_pred -----HHHHHHHHhccCCCCCCCC-----cHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCc
Confidence 2222223334677777654 345789999999999999999999999876544433
No 92
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=4.8e-41 Score=327.13 Aligned_cols=252 Identities=21% Similarity=0.343 Sum_probs=203.1
Q ss_pred CCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccch--hHHHHHHHHHHHHHHHhh-cccccccccceeecCCeEEEEE
Q 011005 206 DFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQV-LHRNIVKLYGYCLHKKCMFLIY 281 (496)
Q Consensus 206 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lV~ 281 (496)
+|.+.+.||+|+||.||+|..+ +++.||+|.+.... ..........|..++..+ +|++|+++++++...+..++||
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM 80 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence 4788999999999999999765 57899999987643 122334567788888777 5899999999999999999999
Q ss_pred EecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCC
Q 011005 282 EYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHAD 361 (496)
Q Consensus 282 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 361 (496)
||+++|+|.+.+.... .+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+++.....
T Consensus 81 E~~~~g~L~~~~~~~~---~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~ 154 (323)
T cd05616 81 EYVNGGDLMYQIQQVG---RFKEPHAVFYAAEIAIGLFFLH---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWD 154 (323)
T ss_pred cCCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---HCCEEecCCCHHHeEECCCCcEEEccCCCceecCCC
Confidence 9999999998887644 6889999999999999999999 789999999999999999999999999999765433
Q ss_pred CCCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHH
Q 011005 362 SSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVI 441 (496)
Q Consensus 362 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (496)
........||+.|+|||++.+..++.++||||+||++|||++|+.||.... .......+.......+..
T Consensus 155 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~-------~~~~~~~i~~~~~~~p~~---- 223 (323)
T cd05616 155 GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGED-------EDELFQSIMEHNVAYPKS---- 223 (323)
T ss_pred CCccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCC-------HHHHHHHHHhCCCCCCCc----
Confidence 333445678999999999999999999999999999999999999996321 122222233222221111
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCH-----HHHHHHHHHh
Q 011005 442 RDILLISTVSFACLQSNPKSRPTM-----QSVSQEFLIT 475 (496)
Q Consensus 442 ~~~~~l~~li~~cl~~dP~~Rps~-----~evl~~~~~~ 475 (496)
....+.+++.+||+.||++|++. .++++|+|+.
T Consensus 224 -~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~~~ 261 (323)
T cd05616 224 -MSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFR 261 (323)
T ss_pred -CCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhcCCCcC
Confidence 12246789999999999999984 8899888764
No 93
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-40 Score=312.76 Aligned_cols=267 Identities=27% Similarity=0.403 Sum_probs=211.7
Q ss_pred hCCCCcceeeecCCeeEEEEEeCCCcEEEEEEcccchhHHHHHHHHHHHHHHHhh--cccccccccceeecCC----eEE
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQV--LHRNIVKLYGYCLHKK----CMF 278 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l--~h~niv~~~~~~~~~~----~~~ 278 (496)
...+..+.+|+|+||.||||.+. ++.||||++.... .+.+.+|-++++.. +|+||++++++-..+. .++
T Consensus 210 ~pl~l~eli~~Grfg~V~KaqL~-~~~VAVKifp~~~----kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eyw 284 (534)
T KOG3653|consen 210 DPLQLLELIGRGRFGCVWKAQLD-NRLVAVKIFPEQE----KQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYW 284 (534)
T ss_pred CchhhHHHhhcCccceeehhhcc-CceeEEEecCHHH----HHHHHhHHHHHhccCccchhHHHhhchhccCCcccccee
Confidence 34566778999999999999994 5999999997654 36678888887765 6999999999887766 799
Q ss_pred EEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCC------CCCeEEeCCCCCceEecCCCCeEEccc
Q 011005 279 LIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDC------SPSIIHRDISSNNILLNSKLEAFVADF 352 (496)
Q Consensus 279 lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~------~~~i~H~dlkp~Nil~~~~~~~kl~Df 352 (496)
||++|.+.|+|.++|..+ .++|.+..+|+..|++||+|||+.. +++|+|||||++|||+..+++..|+||
T Consensus 285 LVt~fh~kGsL~dyL~~n----tisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDF 360 (534)
T KOG3653|consen 285 LVTEFHPKGSLCDYLKAN----TISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADF 360 (534)
T ss_pred EEeeeccCCcHHHHHHhc----cccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeecc
Confidence 999999999999999976 6899999999999999999999854 778999999999999999999999999
Q ss_pred cccccccCCCCC--ccccccccccccccccccCCc-C-----cccchhhHHHHHHHHHhCCCCCcc--ccc--------c
Q 011005 353 GTARLLHADSSN--RTLLAGTYGYIAPELAYTMVM-T-----EKCDVYSFGVVTLEVLMGKHPRDI--LSS--------L 414 (496)
Q Consensus 353 g~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~-~-----~~~DvwslG~il~el~~g~~p~~~--~~~--------~ 414 (496)
|+|..+...... ....+||.+|||||++.+... . .+.||||+|.+||||++....++. ... .
T Consensus 361 GLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~ev 440 (534)
T KOG3653|consen 361 GLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEV 440 (534)
T ss_pred ceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHh
Confidence 999988644322 233789999999999887532 2 378999999999999997655431 111 1
Q ss_pred CCCCCCcchhHhhhcCCCCCCCChhHH--HHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCCC
Q 011005 415 SSSSDPKIMLIDVLDQRLPPPVDRKVI--RDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTPL 480 (496)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~~ 480 (496)
...+..+.+..-++.++..+...+.+. ..+..+.+.++.||+.||+.|.|+.=+-+.++.......
T Consensus 441 G~hPt~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~~~~ 508 (534)
T KOG3653|consen 441 GNHPTLEEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELMMLWE 508 (534)
T ss_pred cCCCCHHHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhccCC
Confidence 112222334444555555555544443 334568899999999999999999999888887776554
No 94
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=4.7e-41 Score=321.38 Aligned_cols=258 Identities=23% Similarity=0.262 Sum_probs=204.8
Q ss_pred CCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchh--HHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEE
Q 011005 206 DFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEE--LAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYE 282 (496)
Q Consensus 206 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e 282 (496)
.|++.+.||+|+||+||++... +++.||+|.+..... ......+.+|+.++++++|+||+++++++..++..++|||
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence 4788899999999999999764 689999999875431 2223456789999999999999999999999999999999
Q ss_pred ecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCC
Q 011005 283 YMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADS 362 (496)
Q Consensus 283 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 362 (496)
|+++|+|.+.+.... ...+++..+..++.|++.||.||| +.+++||||||+||++++++.++|+|||++.......
T Consensus 81 ~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~ 156 (285)
T cd05605 81 LMNGGDLKFHIYNMG-NPGFDEERAVFYAAEITCGLEDLH---RERIVYRDLKPENILLDDYGHIRISDLGLAVEIPEGE 156 (285)
T ss_pred ccCCCcHHHHHHhcC-cCCCCHHHHHHHHHHHHHHHHHHH---HCCcEecCCCHHHEEECCCCCEEEeeCCCceecCCCC
Confidence 999999998886532 236899999999999999999999 7799999999999999999999999999997654322
Q ss_pred CCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHHH
Q 011005 363 SNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVIR 442 (496)
Q Consensus 363 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (496)
......|++.|+|||++.+..++.++||||+|+++|+|++|+.||..... ..........+...... . ...
T Consensus 157 -~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~----~~~~~~~~~~~~~~~~~-~---~~~ 227 (285)
T cd05605 157 -TIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKE----KVKREEVERRVKEDQEE-Y---SEK 227 (285)
T ss_pred -ccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCch----hhHHHHHHHHhhhcccc-c---Ccc
Confidence 22334689999999999999999999999999999999999999963211 00001111111111111 1 111
Q ss_pred HHHHHHHHHHhcccCCCCCCC-----CHHHHHHHHHHhc
Q 011005 443 DILLISTVSFACLQSNPKSRP-----TMQSVSQEFLITR 476 (496)
Q Consensus 443 ~~~~l~~li~~cl~~dP~~Rp-----s~~evl~~~~~~~ 476 (496)
....+.+++.+||+.||++|| +++++++|+|+..
T Consensus 228 ~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~ 266 (285)
T cd05605 228 FSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAHPFFRT 266 (285)
T ss_pred cCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcCcCccC
Confidence 223467899999999999999 8999999999865
No 95
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=1.5e-41 Score=330.09 Aligned_cols=248 Identities=26% Similarity=0.349 Sum_probs=201.1
Q ss_pred ceeeecCCeeEEEEEe----CCCcEEEEEEcccchh-HHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEecC
Q 011005 211 YCIGTGGYGSVYKAQL----PNGKVFALKKLHTSEE-LAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEYME 285 (496)
Q Consensus 211 ~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~~~ 285 (496)
+.||+|+||.||++.. .+|+.||+|.+..... ......+.+|++++++++||||+++++++..++..++||||++
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 81 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR 81 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence 5699999999999964 3688999999976432 2233456789999999999999999999999999999999999
Q ss_pred CCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCCCc
Q 011005 286 RGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNR 365 (496)
Q Consensus 286 ~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 365 (496)
+|+|.+++.+.. .+++..+..++.||+.||+||| +.+|+||||||+||+++.++.++|+|||++..........
T Consensus 82 ~~~L~~~l~~~~---~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~ 155 (318)
T cd05582 82 GGDLFTRLSKEV---MFTEEDVKFYLAELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKA 155 (318)
T ss_pred CCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHeEECCCCcEEEeeccCCcccCCCCCce
Confidence 999999987543 6899999999999999999999 7899999999999999999999999999998664443333
Q ss_pred cccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHHHHHH
Q 011005 366 TLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVIRDIL 445 (496)
Q Consensus 366 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (496)
....|++.|+|||.+.+..++.++||||||+++|||++|+.||.... ...............+.. ...
T Consensus 156 ~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~-------~~~~~~~i~~~~~~~p~~-----~~~ 223 (318)
T cd05582 156 YSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKD-------RKETMTMILKAKLGMPQF-----LSP 223 (318)
T ss_pred ecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCC-------HHHHHHHHHcCCCCCCCC-----CCH
Confidence 44678999999999999889999999999999999999999986321 111222222222221111 112
Q ss_pred HHHHHHHhcccCCCCCCCC-----HHHHHHHHHHhc
Q 011005 446 LISTVSFACLQSNPKSRPT-----MQSVSQEFLITR 476 (496)
Q Consensus 446 ~l~~li~~cl~~dP~~Rps-----~~evl~~~~~~~ 476 (496)
.+.+++.+||+.||++||+ ..++++|+|+..
T Consensus 224 ~~~~li~~~l~~~P~~R~~a~~~~~~~~~~~~~~~~ 259 (318)
T cd05582 224 EAQSLLRALFKRNPANRLGAGPDGVEEIKRHPFFST 259 (318)
T ss_pred HHHHHHHHHhhcCHhHcCCCCCCCHHHHhCCCCcCC
Confidence 4678999999999999999 677998887743
No 96
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=6.2e-41 Score=317.60 Aligned_cols=256 Identities=27% Similarity=0.407 Sum_probs=202.7
Q ss_pred HhCCCCcceeeecCCeeEEEEEe-CCCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEE
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYE 282 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e 282 (496)
.++|++.+.||+|+||.||+|.. .+++.||+|++...... ....+.+|+.++++++||||+++++++..++..++|||
T Consensus 8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~-~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e 86 (267)
T cd06646 8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGD-DFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICME 86 (267)
T ss_pred hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccc-hHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEe
Confidence 35799999999999999999975 46889999998654322 23567889999999999999999999999999999999
Q ss_pred ecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCC
Q 011005 283 YMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADS 362 (496)
Q Consensus 283 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 362 (496)
|+++++|.+++.... .+++..+..++.|++.|+.||| +.+++||||+|+||+++.++.++|+|||++.......
T Consensus 87 ~~~~~~L~~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~ 160 (267)
T cd06646 87 YCGGGSLQDIYHVTG---PLSELQIAYVCRETLQGLAYLH---SKGKMHRDIKGANILLTDNGDVKLADFGVAAKITATI 160 (267)
T ss_pred CCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEECCCCCEEECcCccceeecccc
Confidence 999999999887543 6789999999999999999999 7899999999999999999999999999998764433
Q ss_pred CCccccccccccccccccc---cCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChh
Q 011005 363 SNRTLLAGTYGYIAPELAY---TMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRK 439 (496)
Q Consensus 363 ~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 439 (496)
.......+++.|+|||.+. ...++.++||||+|+++|||++|+.||........ ...........+....
T Consensus 161 ~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~-------~~~~~~~~~~~~~~~~ 233 (267)
T cd06646 161 AKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRA-------LFLMSKSNFQPPKLKD 233 (267)
T ss_pred cccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhh-------heeeecCCCCCCCCcc
Confidence 3334456888999999874 34577899999999999999999999853321110 0000011111111111
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHH
Q 011005 440 VIRDILLISTVSFACLQSNPKSRPTMQSVSQEFL 473 (496)
Q Consensus 440 ~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~ 473 (496)
.......+.+++.+||+.+|++|||++++++++|
T Consensus 234 ~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l~ 267 (267)
T cd06646 234 KTKWSSTFHNFVKISLTKNPKKRPTAERLLTHLF 267 (267)
T ss_pred ccccCHHHHHHHHHHhhCChhhCcCHHHHhcCCC
Confidence 1112235789999999999999999999999875
No 97
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-41 Score=292.88 Aligned_cols=260 Identities=23% Similarity=0.346 Sum_probs=206.1
Q ss_pred HhCCCCcceeeecCCeeEEEEE-eCCCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCC-----eE
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQ-LPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKK-----CM 277 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-----~~ 277 (496)
.++|.+.+.||+|||+-||.++ ..+++.||+|++..... +..+..++|++..++++|||+++++++...+. ..
T Consensus 20 ~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~-~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~ 98 (302)
T KOG2345|consen 20 NKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQ-EDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEA 98 (302)
T ss_pred CceEEEeeeecCCCceeeeeecccCcccchhhheeeccch-HHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeE
Confidence 4689999999999999999996 55789999999987763 34577899999999999999999999886543 48
Q ss_pred EEEEEecCCCChhhhhhCCCCCc-cCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccc
Q 011005 278 FLIYEYMERGSLFCNLHNNEDAV-ELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTAR 356 (496)
Q Consensus 278 ~lV~e~~~~g~L~~~l~~~~~~~-~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~ 356 (496)
|++++|...|+|.+.+....... .+++.++++|+.+|++||.+||.. ..+++||||||.|||+++++.+++.|||.++
T Consensus 99 yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~-~~~yAH~DiKP~NILls~~~~~vl~D~GS~~ 177 (302)
T KOG2345|consen 99 YLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEK-EPPYAHRDIKPANILLSDSGLPVLMDLGSAT 177 (302)
T ss_pred EEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhcc-CCcccccCCCcceeEecCCCceEEEeccCcc
Confidence 99999999999999987654333 789999999999999999999954 3459999999999999999999999999997
Q ss_pred cccCCCCC---------cccccccccccccccccc---CCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchh
Q 011005 357 LLHADSSN---------RTLLAGTYGYIAPELAYT---MVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIML 424 (496)
Q Consensus 357 ~~~~~~~~---------~~~~~gt~~y~aPE~~~~---~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~ 424 (496)
...-.-.. ......|..|+|||.+.- ...++++|||||||++|+|+.|..||+.......+. .
T Consensus 178 ~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgSl-----a 252 (302)
T KOG2345|consen 178 QAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGGSL-----A 252 (302)
T ss_pred ccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCCeE-----E
Confidence 65322111 112347889999998864 457889999999999999999999998654422211 1
Q ss_pred HhhhcCCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHH
Q 011005 425 IDVLDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFL 473 (496)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~ 473 (496)
..+....+..+.... ....+.+++..|++.||.+||++.+++.++-
T Consensus 253 LAv~n~q~s~P~~~~---yse~l~~lik~mlqvdP~qRP~i~~ll~~~d 298 (302)
T KOG2345|consen 253 LAVQNAQISIPNSSR---YSEALHQLIKSMLQVDPNQRPTIPELLSKLD 298 (302)
T ss_pred EeeeccccccCCCCC---ccHHHHHHHHHHhcCCcccCCCHHHHHHHHH
Confidence 122222222222222 2235779999999999999999999998764
No 98
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.1e-40 Score=319.09 Aligned_cols=264 Identities=24% Similarity=0.346 Sum_probs=208.9
Q ss_pred hCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEe
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEY 283 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~ 283 (496)
++|++.+.||+|+||.||+|..+ +++.||+|.+...........+.+|+.++++++|+||+++++++...+..++||||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEY 80 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEee
Confidence 36888999999999999999775 78999999887643334456788999999999999999999999999999999999
Q ss_pred cCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCC
Q 011005 284 MERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSS 363 (496)
Q Consensus 284 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 363 (496)
+++++|..++........+++..+..++.|++.||.|||+ ..+++|+||||+||+++.++.++|+|||++......
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~--~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~-- 156 (286)
T cd06622 81 MDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKE--EHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVAS-- 156 (286)
T ss_pred cCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHh--cCCEeeCCCCHHHEEECCCCCEEEeecCCcccccCC--
Confidence 9999999888765434468999999999999999999994 358999999999999999999999999999765322
Q ss_pred CccccccccccccccccccCC------cCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCC
Q 011005 364 NRTLLAGTYGYIAPELAYTMV------MTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVD 437 (496)
Q Consensus 364 ~~~~~~gt~~y~aPE~~~~~~------~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (496)
......+++.|+|||.+.+.. ++.++||||+|+++|+|++|+.||..... ...............+ ...
T Consensus 157 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~----~~~~~~~~~~~~~~~~-~~~ 231 (286)
T cd06622 157 LAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETY----ANIFAQLSAIVDGDPP-TLP 231 (286)
T ss_pred ccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcch----hhHHHHHHHHhhcCCC-CCC
Confidence 223345788999999986543 47899999999999999999999863211 0000111111111111 111
Q ss_pred hhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCCC
Q 011005 438 RKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTPL 480 (496)
Q Consensus 438 ~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~~ 480 (496)
. .....+.+++.+||+.+|++||+++++++|+|+......
T Consensus 232 ~---~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~~~~~~~~~~ 271 (286)
T cd06622 232 S---GYSDDAQDFVAKCLNKIPNRRPTYAQLLEHPWLVKYKNA 271 (286)
T ss_pred c---ccCHHHHHHHHHHcccCcccCCCHHHHhcChhhhhccCC
Confidence 1 123346789999999999999999999999998777544
No 99
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=1.4e-40 Score=317.18 Aligned_cols=258 Identities=24% Similarity=0.358 Sum_probs=204.4
Q ss_pred hCCCCcceeeecCCeeEEEEEe-CCCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEe
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEY 283 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~ 283 (496)
++|++.+.||+|+||.||+|.+ .+++.||+|.+.........+.+.+|++++++++||||+++++++...+..++||||
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 80 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEF 80 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEec
Confidence 3678889999999999999965 578899999987654344456788999999999999999999999999999999999
Q ss_pred cCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCC
Q 011005 284 MERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSS 363 (496)
Q Consensus 284 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 363 (496)
+++++|..+. .+++..+..++.|++.||.||| +.+++|+||||+||+++.++.++|+|||++......
T Consensus 81 ~~~~~l~~~~-------~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~-- 148 (279)
T cd06619 81 MDGGSLDVYR-------KIPEHVLGRIAVAVVKGLTYLW---SLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNS-- 148 (279)
T ss_pred CCCCChHHhh-------cCCHHHHHHHHHHHHHHHHHHH---HCCEeeCCCCHHHEEECCCCCEEEeeCCcceecccc--
Confidence 9999986442 4678888899999999999999 789999999999999999999999999999765432
Q ss_pred CccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHHHH
Q 011005 364 NRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVIRD 443 (496)
Q Consensus 364 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 443 (496)
......++..|+|||.+.+..++.++||||+|+++|+|++|+.||............... ........+..... ...
T Consensus 149 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~--~~~ 225 (279)
T cd06619 149 IAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQL-LQCIVDEDPPVLPV--GQF 225 (279)
T ss_pred cccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHH-HHHHhccCCCCCCC--CcC
Confidence 223457899999999999999999999999999999999999998643321111111111 11111111111100 011
Q ss_pred HHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhcc
Q 011005 444 ILLISTVSFACLQSNPKSRPTMQSVSQEFLITRK 477 (496)
Q Consensus 444 ~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~ 477 (496)
...+.+++.+||+.+|++||+++|+++|+|+...
T Consensus 226 ~~~~~~li~~~l~~~P~~Rp~~~eil~~~~~~~~ 259 (279)
T cd06619 226 SEKFVHFITQCMRKQPKERPAPENLMDHPFIVQY 259 (279)
T ss_pred CHHHHHHHHHHhhCChhhCCCHHHHhcCcccccc
Confidence 2246789999999999999999999999998665
No 100
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=1.4e-40 Score=314.98 Aligned_cols=253 Identities=23% Similarity=0.356 Sum_probs=201.4
Q ss_pred HhCCCCcceeeecCCeeEEEEEeC----CCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEE
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLP----NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFL 279 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 279 (496)
.++|++.+.||+|+||.||+|.++ .+..||+|.++..........+.+|+.++++++||||+++++++..++..++
T Consensus 4 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 83 (266)
T cd05064 4 NKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMI 83 (266)
T ss_pred hHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEE
Confidence 356889999999999999999653 4668999999876544445678999999999999999999999999999999
Q ss_pred EEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEcccccccccc
Q 011005 280 IYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLH 359 (496)
Q Consensus 280 V~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 359 (496)
||||+++|+|.+++.... ..+++..++.++.|++.||+||| +.+++||||||+||+++.++.++++|||.+....
T Consensus 84 v~e~~~~~~L~~~l~~~~--~~l~~~~~~~~~~~i~~al~~lH---~~~iiH~dikp~nili~~~~~~~l~dfg~~~~~~ 158 (266)
T cd05064 84 VTEYMSNGALDSFLRKHE--GQLVAGQLMGMLPGLASGMKYLS---EMGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDK 158 (266)
T ss_pred EEEeCCCCcHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHH---HCCEeeccccHhhEEEcCCCcEEECCCccccccc
Confidence 999999999999987643 26899999999999999999999 7899999999999999999999999999876542
Q ss_pred CCCCC-ccccccccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccCCCCCCcchhHhhhcCCCCCCCC
Q 011005 360 ADSSN-RTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVD 437 (496)
Q Consensus 360 ~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (496)
..... .....++..|+|||.+.+..++.++||||||+++||+++ |+.||..... ....... ......+..
T Consensus 159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~-------~~~~~~~-~~~~~~~~~ 230 (266)
T cd05064 159 SEAIYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSG-------QDVIKAV-EDGFRLPAP 230 (266)
T ss_pred ccchhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCH-------HHHHHHH-HCCCCCCCC
Confidence 22111 112234578999999999999999999999999999775 9999863321 1111111 111111111
Q ss_pred hhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHH
Q 011005 438 RKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEF 472 (496)
Q Consensus 438 ~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~ 472 (496)
. ..+..+.+++.+||+.+|++||+++|+++.+
T Consensus 231 ~---~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l 262 (266)
T cd05064 231 R---NCPNLLHQLMLDCWQKERGERPRFSQIHSIL 262 (266)
T ss_pred C---CCCHHHHHHHHHHcCCCchhCCCHHHHHHHH
Confidence 1 1223577899999999999999999998865
No 101
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=7.2e-41 Score=324.46 Aligned_cols=248 Identities=24% Similarity=0.377 Sum_probs=196.9
Q ss_pred ceeeecCCeeEEEEEeC-CCcEEEEEEcccchh--HHHHHHHHHHHHHHHhh-cccccccccceeecCCeEEEEEEecCC
Q 011005 211 YCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEE--LAFIKSFKNEAQVLSQV-LHRNIVKLYGYCLHKKCMFLIYEYMER 286 (496)
Q Consensus 211 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lV~e~~~~ 286 (496)
+.||+|+||+||+|... +++.||+|.++.... .........|..+++.. +||||+++++++..++..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 36999999999999765 578999999876421 22334566777888765 899999999999999999999999999
Q ss_pred CChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCCCcc
Q 011005 287 GSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRT 366 (496)
Q Consensus 287 g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 366 (496)
|+|.+++.... .+++..+..++.|++.||.||| +.+++||||||+||+++.++.++|+|||+++..........
T Consensus 81 g~L~~~l~~~~---~~~~~~~~~~~~qi~~al~~LH---~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 154 (316)
T cd05619 81 GDLMFHIQSCH---KFDLPRATFYAAEIICGLQFLH---SKGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDAKTC 154 (316)
T ss_pred CcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---hCCeEeCCCCHHHEEECCCCCEEEccCCcceECCCCCCcee
Confidence 99999987543 6788999999999999999999 78999999999999999999999999999875433333334
Q ss_pred ccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHHHHHHH
Q 011005 367 LLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVIRDILL 446 (496)
Q Consensus 367 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (496)
...||+.|+|||++.+..++.++||||+||++|||++|+.||.... ...............+ . .....
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~-------~~~~~~~i~~~~~~~~--~---~~~~~ 222 (316)
T cd05619 155 TFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHD-------EEELFQSIRMDNPCYP--R---WLTRE 222 (316)
T ss_pred eecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCC-------HHHHHHHHHhCCCCCC--c---cCCHH
Confidence 4678999999999999999999999999999999999999986321 1111111111111111 0 01124
Q ss_pred HHHHHHhcccCCCCCCCCHH-HHHHHHHHhc
Q 011005 447 ISTVSFACLQSNPKSRPTMQ-SVSQEFLITR 476 (496)
Q Consensus 447 l~~li~~cl~~dP~~Rps~~-evl~~~~~~~ 476 (496)
+.+++.+||+.||++||++. ++++|+|+..
T Consensus 223 ~~~li~~~l~~~P~~R~~~~~~l~~h~~~~~ 253 (316)
T cd05619 223 AKDILVKLFVREPERRLGVKGDIRQHPFFRE 253 (316)
T ss_pred HHHHHHHHhccCHhhcCCChHHHHcCcccCC
Confidence 67899999999999999996 8999988755
No 102
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=1.8e-41 Score=337.29 Aligned_cols=255 Identities=22% Similarity=0.309 Sum_probs=200.8
Q ss_pred hCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchh--HHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEE
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEE--LAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIY 281 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~ 281 (496)
++|++.+.||+|+||.||+|..+ +++.||+|.+..... ......+.+|+.++++++|+||+++++.+.+++..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM 80 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEE
Confidence 36899999999999999999754 689999999875431 223456789999999999999999999999999999999
Q ss_pred EecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCC
Q 011005 282 EYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHAD 361 (496)
Q Consensus 282 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 361 (496)
||+++|+|.+++.+.. .++...+..++.||+.||+||| +.+|+||||||+|||++.++.++|+|||++..+...
T Consensus 81 E~~~~g~L~~~i~~~~---~~~~~~~~~~~~qi~~al~~lH---~~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~ 154 (376)
T cd05598 81 DYIPGGDMMSLLIRLG---IFEEDLARFYIAELTCAIESVH---KMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWT 154 (376)
T ss_pred eCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCCHHHEEECCCCCEEEEeCCCCcccccc
Confidence 9999999999997653 5788888999999999999999 789999999999999999999999999997533100
Q ss_pred C-------------------------------------------CCccccccccccccccccccCCcCcccchhhHHHHH
Q 011005 362 S-------------------------------------------SNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVT 398 (496)
Q Consensus 362 ~-------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il 398 (496)
. ......+||+.|+|||++.+..++.++||||+||++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil 234 (376)
T cd05598 155 HDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVIL 234 (376)
T ss_pred ccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeecccee
Confidence 0 001124689999999999999999999999999999
Q ss_pred HHHHhCCCCCccccccCCCCCCcchhHhhhc--CCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCC---CHHHHHHHHH
Q 011005 399 LEVLMGKHPRDILSSLSSSSDPKIMLIDVLD--QRLPPPVDRKVIRDILLISTVSFACLQSNPKSRP---TMQSVSQEFL 473 (496)
Q Consensus 399 ~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp---s~~evl~~~~ 473 (496)
|||++|+.||..... ......... .....+... .....+.+++.+|+ .+|.+|+ ++.|+++|+|
T Consensus 235 yell~G~~Pf~~~~~-------~~~~~~i~~~~~~~~~~~~~---~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~h~~ 303 (376)
T cd05598 235 YEMLVGQPPFLADTP-------AETQLKVINWETTLHIPSQA---KLSREASDLILRLC-CGAEDRLGKNGADEIKAHPF 303 (376)
T ss_pred eehhhCCCCCCCCCH-------HHHHHHHhccCccccCCCCC---CCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhCCCC
Confidence 999999999963321 111111111 111111100 11123556777766 5999999 9999999999
Q ss_pred Hhc
Q 011005 474 ITR 476 (496)
Q Consensus 474 ~~~ 476 (496)
+..
T Consensus 304 ~~~ 306 (376)
T cd05598 304 FKG 306 (376)
T ss_pred cCC
Confidence 864
No 103
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=1.9e-41 Score=331.13 Aligned_cols=256 Identities=25% Similarity=0.358 Sum_probs=205.3
Q ss_pred hCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchh--HHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEE
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEE--LAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIY 281 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~ 281 (496)
++|.+.+.||+|+||+||+|..+ +++.||+|.++.... ....+.+.+|+.+++.++|+||+++++++...+..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM 80 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence 36889999999999999999764 689999999976432 234466889999999999999999999999999999999
Q ss_pred EecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCC
Q 011005 282 EYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHAD 361 (496)
Q Consensus 282 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 361 (496)
||+++|+|.+++.... ..+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||++......
T Consensus 81 e~~~~~~L~~~l~~~~--~~l~~~~~~~~~~qi~~aL~~lH---~~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~ 155 (330)
T cd05601 81 EYQPGGDLLSLLNRYE--DQFDEDMAQFYLAELVLAIHSVH---QMGYVHRDIKPENVLIDRTGHIKLADFGSAARLTAN 155 (330)
T ss_pred CCCCCCCHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeEcccCchHheEECCCCCEEeccCCCCeECCCC
Confidence 9999999999997652 26889999999999999999999 789999999999999999999999999999876443
Q ss_pred CCC-ccccccccccccccccc------cCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCC--C
Q 011005 362 SSN-RTLLAGTYGYIAPELAY------TMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQR--L 432 (496)
Q Consensus 362 ~~~-~~~~~gt~~y~aPE~~~------~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~--~ 432 (496)
... .....||+.|+|||++. +..++.++||||+|+++|+|++|+.||..... ......+.... .
T Consensus 156 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~-------~~~~~~i~~~~~~~ 228 (330)
T cd05601 156 KMVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTS-------AKTYNNIMNFQRFL 228 (330)
T ss_pred CceeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCH-------HHHHHHHHcCCCcc
Confidence 222 23346899999999987 45678899999999999999999999963221 11122222111 1
Q ss_pred CCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhc
Q 011005 433 PPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITR 476 (496)
Q Consensus 433 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~ 476 (496)
..+... .....+.+++.+|++ +|++|||+.++++|+|+..
T Consensus 229 ~~~~~~---~~~~~~~~li~~ll~-~p~~R~t~~~l~~h~~~~~ 268 (330)
T cd05601 229 KFPEDP---KVSSDFLDLIQSLLC-GQKERLGYEGLCCHPFFSK 268 (330)
T ss_pred CCCCCC---CCCHHHHHHHHHHcc-ChhhCCCHHHHhCCCCcCC
Confidence 111100 112346788899998 9999999999999999864
No 104
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=2.9e-41 Score=330.49 Aligned_cols=262 Identities=23% Similarity=0.348 Sum_probs=207.7
Q ss_pred hCCCCcceeeecCCeeEEEEE-eCCCcEEEEEEcccchhHHHHHHHHHHHHHHHhhc-c-----cccccccceeecCCeE
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQ-LPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVL-H-----RNIVKLYGYCLHKKCM 277 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~-h-----~niv~~~~~~~~~~~~ 277 (496)
.+|.+.+.||+|+||.|-+|. .++++.||||+++.... ...+...|+.++..++ | -|+|+++++|...+++
T Consensus 186 ~rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~--f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hl 263 (586)
T KOG0667|consen 186 YRYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKR--FLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHL 263 (586)
T ss_pred EEEEEEEEecccccceeEEEEecCCCcEEEEEeeccChH--HHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccce
Confidence 389999999999999999994 56799999999987653 4466788999999997 4 4899999999999999
Q ss_pred EEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCC--CCeEEcccccc
Q 011005 278 FLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSK--LEAFVADFGTA 355 (496)
Q Consensus 278 ~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~--~~~kl~Dfg~~ 355 (496)
|||+|.++ -+|+++++.+... .++...++.++.||+.||.+|| ..+|||+||||+|||+.+. ..+||+|||.|
T Consensus 264 ciVfELL~-~NLYellK~n~f~-Glsl~~ir~~~~Qil~~L~~L~---~l~IIHcDLKPENILL~~~~r~~vKVIDFGSS 338 (586)
T KOG0667|consen 264 CIVFELLS-TNLYELLKNNKFR-GLSLPLVRKFAQQILTALLFLH---ELGIIHCDLKPENILLKDPKRSRIKVIDFGSS 338 (586)
T ss_pred eeeehhhh-hhHHHHHHhcCCC-CCCHHHHHHHHHHHHHHHHHHH---hCCeeeccCChhheeeccCCcCceeEEecccc
Confidence 99999985 5999999987644 5899999999999999999999 8899999999999999754 46999999999
Q ss_pred ccccCCCCCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCcccccc---------------------
Q 011005 356 RLLHADSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSL--------------------- 414 (496)
Q Consensus 356 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~--------------------- 414 (496)
+.....- ...+.+..|+|||++.|.+|+.+.||||||||++||++|.+-|...+..
T Consensus 339 c~~~q~v---ytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~~mL~~~ 415 (586)
T KOG0667|consen 339 CFESQRV---YTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGLPPPKMLDTA 415 (586)
T ss_pred cccCCcc---eeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCCHHHHHhc
Confidence 8764332 2567888999999999999999999999999999999998777533221
Q ss_pred -------CC-CCCC-----cc------------hhHhhhcC-CCCCCC---ChhHH-HHHHHHHHHHHhcccCCCCCCCC
Q 011005 415 -------SS-SSDP-----KI------------MLIDVLDQ-RLPPPV---DRKVI-RDILLISTVSFACLQSNPKSRPT 464 (496)
Q Consensus 415 -------~~-~~~~-----~~------------~~~~~~~~-~~~~~~---~~~~~-~~~~~l~~li~~cl~~dP~~Rps 464 (496)
.. ...+ .. ........ +.++.. ..... .+...+.+++.+||.+||.+|+|
T Consensus 416 ~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R~t 495 (586)
T KOG0667|consen 416 KKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAERIT 495 (586)
T ss_pred cccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCchhcCC
Confidence 00 0000 00 00000111 122111 11111 34456899999999999999999
Q ss_pred HHHHHHHHHHhc
Q 011005 465 MQSVSQEFLITR 476 (496)
Q Consensus 465 ~~evl~~~~~~~ 476 (496)
+.|+++|+|++.
T Consensus 496 p~qal~Hpfl~~ 507 (586)
T KOG0667|consen 496 PAQALNHPFLTG 507 (586)
T ss_pred HHHHhcCccccc
Confidence 999999999983
No 105
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4e-40 Score=306.66 Aligned_cols=264 Identities=25% Similarity=0.403 Sum_probs=208.9
Q ss_pred HHhCCCCcceeeecCCeeEEEEEeCCCcEEEEEEcccchhHHHHHHHHHHHHHHHhh--cccccccccceeecCC----e
Q 011005 203 ATEDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQV--LHRNIVKLYGYCLHKK----C 276 (496)
Q Consensus 203 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l--~h~niv~~~~~~~~~~----~ 276 (496)
...+..+.+.||+|.||+||+|++ .|+.||||++...+. +.+.+|.++++.+ +|+||+.+++.-..++ +
T Consensus 209 iarqI~L~e~IGkGRyGEVwrG~w-rGe~VAVKiF~srdE----~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQ 283 (513)
T KOG2052|consen 209 IARQIVLQEIIGKGRFGEVWRGRW-RGEDVAVKIFSSRDE----RSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQ 283 (513)
T ss_pred hhheeEEEEEecCccccceeeccc-cCCceEEEEecccch----hhhhhHHHHHHHHHhccchhhhhhhccccCCCceEE
Confidence 346788899999999999999999 589999999987654 5677888888775 8999999999876554 5
Q ss_pred EEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhC-----CCCCeEEeCCCCCceEecCCCCeEEcc
Q 011005 277 MFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHD-----CSPSIIHRDISSNNILLNSKLEAFVAD 351 (496)
Q Consensus 277 ~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~-----~~~~i~H~dlkp~Nil~~~~~~~kl~D 351 (496)
+|||++|.+.|||+|+|... .++....++++..+|.||+|||.+ .++.|.|||||+.|||+..++.+.|+|
T Consensus 284 LwLvTdYHe~GSL~DyL~r~----tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IAD 359 (513)
T KOG2052|consen 284 LWLVTDYHEHGSLYDYLNRN----TVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIAD 359 (513)
T ss_pred EEEeeecccCCcHHHHHhhc----cCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEee
Confidence 89999999999999999975 789999999999999999999974 378899999999999999999999999
Q ss_pred ccccccccCCCCC----ccccccccccccccccccCCcC------cccchhhHHHHHHHHHhC----------CCCCccc
Q 011005 352 FGTARLLHADSSN----RTLLAGTYGYIAPELAYTMVMT------EKCDVYSFGVVTLEVLMG----------KHPRDIL 411 (496)
Q Consensus 352 fg~~~~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~------~~~DvwslG~il~el~~g----------~~p~~~~ 411 (496)
+|+|......... ....+||.+|||||++...-.. ..+||||||.++||+... +.||...
T Consensus 360 LGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~ 439 (513)
T KOG2052|consen 360 LGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDV 439 (513)
T ss_pred ceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccC
Confidence 9999887655322 3457899999999998765321 369999999999999863 4565433
Q ss_pred cccCCCCCCcchhHhhhcCCCCCCCChhHH--HHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhcc
Q 011005 412 SSLSSSSDPKIMLIDVLDQRLPPPVDRKVI--RDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRK 477 (496)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~ 477 (496)
-+ .++..+.+..-+..+++.+.....+. .....+.+++..||..+|..|.|+-.+-+.+-...+
T Consensus 440 Vp--~DPs~eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~~ 505 (513)
T KOG2052|consen 440 VP--SDPSFEEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLSN 505 (513)
T ss_pred CC--CCCCHHHHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHhc
Confidence 22 22222334444444555544444333 334568899999999999999999998877765543
No 106
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.3e-41 Score=317.39 Aligned_cols=262 Identities=21% Similarity=0.331 Sum_probs=223.1
Q ss_pred hCCCCcceeeecCCeeEEEEEe-CCCcEEEEEEcccch-hHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEE
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSE-ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYE 282 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e 282 (496)
.=|.+.+.||+|.|++|-+|++ -.|..||||++.+.. +......+..|+.+|+.++|||||++|++......+|+|.|
T Consensus 18 GLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLE 97 (864)
T KOG4717|consen 18 GLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILE 97 (864)
T ss_pred eeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEE
Confidence 4577888999999999999954 589999999997754 33344667899999999999999999999999999999999
Q ss_pred ecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEe-cCCCCeEEccccccccccCC
Q 011005 283 YMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILL-NSKLEAFVADFGTARLLHAD 361 (496)
Q Consensus 283 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~-~~~~~~kl~Dfg~~~~~~~~ 361 (496)
.-++|+|++++.+... .+++..+.+++.||+.|+.|+| ...+|||||||+||.+ ..-|-|||+|||++..+.+
T Consensus 98 LGD~GDl~DyImKHe~--Gl~E~La~kYF~QI~~AI~YCH---qLHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~P- 171 (864)
T KOG4717|consen 98 LGDGGDLFDYIMKHEE--GLNEDLAKKYFAQIVHAISYCH---QLHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQP- 171 (864)
T ss_pred ecCCchHHHHHHhhhc--cccHHHHHHHHHHHHHHHHHHh---hhhhhcccCCcceeEEeeecCceEeeeccccccCCC-
Confidence 9999999999988765 5788999999999999999999 6789999999999866 5568999999999988754
Q ss_pred CCCccccccccccccccccccCCcC-cccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhH
Q 011005 362 SSNRTLLAGTYGYIAPELAYTMVMT-EKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKV 440 (496)
Q Consensus 362 ~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 440 (496)
+....+.||+..|-|||++.|..|+ +++||||+|||||.|++|++||+.++ ..+....+++....-+.
T Consensus 172 G~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeAN-------DSETLTmImDCKYtvPs---- 240 (864)
T KOG4717|consen 172 GKKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEAN-------DSETLTMIMDCKYTVPS---- 240 (864)
T ss_pred cchhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCcccccc-------chhhhhhhhcccccCch----
Confidence 4456678999999999999999987 58999999999999999999998543 33455666666655432
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCCCCCcc
Q 011005 441 IRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTPLVKHA 484 (496)
Q Consensus 441 ~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~~~~~~ 484 (496)
.....+.+||..||..||.+|.|.+||..+.|.+.-.+....+
T Consensus 241 -hvS~eCrdLI~sMLvRdPkkRAslEeI~s~~Wlq~~D~~~sT~ 283 (864)
T KOG4717|consen 241 -HVSKECRDLIQSMLVRDPKKRASLEEIVSTSWLQAGDRGLSTA 283 (864)
T ss_pred -hhhHHHHHHHHHHHhcCchhhccHHHHhccccccCCCCCcccc
Confidence 2233578999999999999999999999999998887766553
No 107
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=3.4e-40 Score=315.29 Aligned_cols=255 Identities=25% Similarity=0.433 Sum_probs=204.8
Q ss_pred hCCCCcceeeecCCeeEEEEEeCC------CcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEE
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLPN------GKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMF 278 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 278 (496)
++|++.+.||+|+||.||+|.... ...||+|.+...........+.+|+.++++++||||+++++++......+
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTC 84 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceE
Confidence 468899999999999999997543 25799999876555455567899999999999999999999999988999
Q ss_pred EEEEecCCCChhhhhhCCCCC-------------ccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCC
Q 011005 279 LIYEYMERGSLFCNLHNNEDA-------------VELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKL 345 (496)
Q Consensus 279 lV~e~~~~g~L~~~l~~~~~~-------------~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~ 345 (496)
++|||+++|+|.+++...... ..+++..++.++.|++.||.||| ..+++|+||||+||++++++
T Consensus 85 ~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH---~~~i~H~dlkp~Nil~~~~~ 161 (283)
T cd05048 85 MLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLS---SHHFVHRDLAARNCLVGEGL 161 (283)
T ss_pred EEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccccccceEEEcCCC
Confidence 999999999999998754211 35788999999999999999999 78999999999999999999
Q ss_pred CeEEccccccccccCCCC--CccccccccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccCCCCCCcc
Q 011005 346 EAFVADFGTARLLHADSS--NRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSSDPKI 422 (496)
Q Consensus 346 ~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~~~~~ 422 (496)
.++|+|||++........ ......+++.|+|||.+.+..++.++||||||+++|||++ |..||.... ..
T Consensus 162 ~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~-------~~- 233 (283)
T cd05048 162 TVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFS-------NQ- 233 (283)
T ss_pred cEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCC-------HH-
Confidence 999999999976533221 1223456788999999998899999999999999999998 999986321 11
Q ss_pred hhHhhhcCCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHH
Q 011005 423 MLIDVLDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFL 473 (496)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~ 473 (496)
.....+......... ...+..+.+++.+||+.||++||++.|+++++.
T Consensus 234 ~~~~~i~~~~~~~~~---~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~ 281 (283)
T cd05048 234 EVIEMIRSRQLLPCP---EDCPARVYALMIECWNEIPARRPRFKDIHTRLR 281 (283)
T ss_pred HHHHHHHcCCcCCCc---ccCCHHHHHHHHHHccCChhhCcCHHHHHHHHh
Confidence 122222222211111 122345789999999999999999999999874
No 108
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=2.2e-40 Score=327.37 Aligned_cols=264 Identities=25% Similarity=0.275 Sum_probs=199.8
Q ss_pred HHhCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccch-hHHHHHHHHHHHHHHHhhcccccccccceeecCC-----
Q 011005 203 ATEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSE-ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKK----- 275 (496)
Q Consensus 203 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~----- 275 (496)
..++|++.+.||+|+||.||+|... .|+.||+|.+.... .......+.+|+.+++.++||||+++++++....
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 98 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEF 98 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcccc
Confidence 4578999999999999999999764 68999999986532 2233466789999999999999999999886543
Q ss_pred -eEEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccc
Q 011005 276 -CMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGT 354 (496)
Q Consensus 276 -~~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~ 354 (496)
..++||||+++ ++...+.. .++...+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+
T Consensus 99 ~~~~lv~e~~~~-~l~~~~~~-----~~~~~~~~~~~~qi~~~L~~LH---~~~ivHrDlkp~NIl~~~~~~~kl~Dfg~ 169 (359)
T cd07876 99 QDVYLVMELMDA-NLCQVIHM-----ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGL 169 (359)
T ss_pred ceeEEEEeCCCc-CHHHHHhc-----cCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEECCCCCEEEecCCC
Confidence 47999999975 56655542 4788889999999999999999 78999999999999999999999999999
Q ss_pred cccccCCCCCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCC-------CCCCcc-----
Q 011005 355 ARLLHADSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSS-------SSDPKI----- 422 (496)
Q Consensus 355 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~-------~~~~~~----- 422 (496)
++..... .......+|+.|+|||.+.+..++.++||||+|+++|+|++|+.||........ ...+..
T Consensus 170 a~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (359)
T cd07876 170 ARTACTN-FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNR 248 (359)
T ss_pred ccccccC-ccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHH
Confidence 9765332 223345689999999999999999999999999999999999999964321000 000000
Q ss_pred ---hhHhhhcCCCCC---------------CCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhc
Q 011005 423 ---MLIDVLDQRLPP---------------PVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITR 476 (496)
Q Consensus 423 ---~~~~~~~~~~~~---------------~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~ 476 (496)
............ ............+.+|+.+||+.||++|||+.|+++|+|+..
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~ 320 (359)
T cd07876 249 LQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHPYITV 320 (359)
T ss_pred HHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcCchhhh
Confidence 000000000000 000000011234679999999999999999999999999874
No 109
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=1.7e-40 Score=323.07 Aligned_cols=253 Identities=21% Similarity=0.348 Sum_probs=203.3
Q ss_pred CCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccch--hHHHHHHHHHHHHHHHhhc-ccccccccceeecCCeEEEEE
Q 011005 206 DFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVL-HRNIVKLYGYCLHKKCMFLIY 281 (496)
Q Consensus 206 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lV~ 281 (496)
+|+..+.||+|+||+||+|..+ +++.||+|++.... .....+.+..|..+++.+. |++|+++++++...+..++||
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM 80 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence 4777899999999999999764 68899999987643 2233456778888888886 577888999999999999999
Q ss_pred EecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCC
Q 011005 282 EYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHAD 361 (496)
Q Consensus 282 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 361 (496)
||+++|+|.+++.... .+++.++..++.|++.||.||| +.+++||||||+||+++.++.++|+|||+++.....
T Consensus 81 Ey~~~g~L~~~i~~~~---~l~~~~~~~i~~qi~~al~~lH---~~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~ 154 (323)
T cd05615 81 EYVNGGDLMYHIQQVG---KFKEPQAVFYAAEISVGLFFLH---RRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVD 154 (323)
T ss_pred cCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHeEECCCCCEEEeccccccccCCC
Confidence 9999999999987644 6899999999999999999999 789999999999999999999999999999765433
Q ss_pred CCCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHH
Q 011005 362 SSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVI 441 (496)
Q Consensus 362 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (496)
........||+.|+|||++.+..++.++||||+|+++|+|++|+.||.... .......+.......+..
T Consensus 155 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~-------~~~~~~~i~~~~~~~p~~---- 223 (323)
T cd05615 155 GVTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGED-------EDELFQSIMEHNVSYPKS---- 223 (323)
T ss_pred CccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCC-------HHHHHHHHHhCCCCCCcc----
Confidence 333444578999999999999999999999999999999999999986321 122222333322221111
Q ss_pred HHHHHHHHHHHhcccCCCCCCCC-----HHHHHHHHHHhc
Q 011005 442 RDILLISTVSFACLQSNPKSRPT-----MQSVSQEFLITR 476 (496)
Q Consensus 442 ~~~~~l~~li~~cl~~dP~~Rps-----~~evl~~~~~~~ 476 (496)
....+.+++.+||+.||.+|++ .+++++|+|+..
T Consensus 224 -~~~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~f~~ 262 (323)
T cd05615 224 -LSKEAVSICKGLMTKHPSKRLGCGPEGERDIREHAFFRR 262 (323)
T ss_pred -CCHHHHHHHHHHcccCHhhCCCCCCCCHHHHhcCcccCC
Confidence 1124678999999999999997 478888888764
No 110
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=3e-40 Score=310.80 Aligned_cols=253 Identities=28% Similarity=0.423 Sum_probs=207.4
Q ss_pred CCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccch-hHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEe
Q 011005 206 DFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSE-ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEY 283 (496)
Q Consensus 206 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~ 283 (496)
+|++.+.||+|++|.||+|..+ +++.|++|.+.... .......+.+|++++++++|||++++++++...+..++||||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEY 80 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEe
Confidence 4778899999999999999764 68999999886532 234456788999999999999999999999999999999999
Q ss_pred cCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCC
Q 011005 284 MERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSS 363 (496)
Q Consensus 284 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 363 (496)
+++++|.+++.... ...+++..++.++.|++.||.||| +.+++|+||+|+||+++.++.++|+|||+++.......
T Consensus 81 ~~~~~L~~~l~~~~-~~~~~~~~~~~i~~~l~~al~~lH---~~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~ 156 (256)
T cd08529 81 AENGDLHKLLKMQR-GRPLPEDQVWRFFIQILLGLAHLH---SKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTN 156 (256)
T ss_pred CCCCcHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcceEEEeCCCCEEEcccccceeccCccc
Confidence 99999999987642 236889999999999999999999 78999999999999999999999999999987654433
Q ss_pred CccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHHHH
Q 011005 364 NRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVIRD 443 (496)
Q Consensus 364 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 443 (496)
......+++.|+|||+..+..++.++||||||+++|+|++|+.||.... .............+... . ..
T Consensus 157 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-------~~~~~~~~~~~~~~~~~-~---~~ 225 (256)
T cd08529 157 FANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANN-------QGALILKIIRGVFPPVS-Q---MY 225 (256)
T ss_pred hhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCC-------HHHHHHHHHcCCCCCCc-c---cc
Confidence 3344568899999999999999999999999999999999999986322 11112222222222111 1 12
Q ss_pred HHHHHHHHHhcccCCCCCCCCHHHHHHHHH
Q 011005 444 ILLISTVSFACLQSNPKSRPTMQSVSQEFL 473 (496)
Q Consensus 444 ~~~l~~li~~cl~~dP~~Rps~~evl~~~~ 473 (496)
...+.+++.+||+.+|++||++.++++++|
T Consensus 226 ~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~ 255 (256)
T cd08529 226 SQQLAQLIDQCLTKDYRQRPDTFQLLRNPS 255 (256)
T ss_pred CHHHHHHHHHHccCCcccCcCHHHHhhCCC
Confidence 235789999999999999999999999876
No 111
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4e-42 Score=331.24 Aligned_cols=260 Identities=24% Similarity=0.347 Sum_probs=212.4
Q ss_pred hCCCCcceeeecCCeeEEEEEeCCCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEec
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEYM 284 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~~ 284 (496)
+-|.++..||.|+||.||||..++....|.-++....+......+.-|++|+..++||+||++++.|...+.+||..|||
T Consensus 32 d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC 111 (1187)
T KOG0579|consen 32 DHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFC 111 (1187)
T ss_pred HHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeec
Confidence 44667778999999999999877655544433334444556788999999999999999999999999999999999999
Q ss_pred CCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCCC
Q 011005 285 ERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSN 364 (496)
Q Consensus 285 ~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 364 (496)
.||....++-.-+. .+...++.-+++|++.||.||| +..|||||||+.|||++-+|.++|+|||.+.........
T Consensus 112 ~GGAVDaimlEL~r--~LtE~QIqvvc~q~ldALn~LH---s~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t~qk 186 (1187)
T KOG0579|consen 112 GGGAVDAIMLELGR--VLTEDQIQVVCYQVLDALNWLH---SQNIIHRDLKAGNILLTLDGDIRLADFGVSAKNKSTRQK 186 (1187)
T ss_pred CCchHhHHHHHhcc--ccchHHHHHHHHHHHHHHHHHh---hcchhhhhccccceEEEecCcEeeecccccccchhHHhh
Confidence 99999888775433 6899999999999999999999 789999999999999999999999999998766554455
Q ss_pred ccccccccccccccccc-----cCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChh
Q 011005 365 RTLLAGTYGYIAPELAY-----TMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRK 439 (496)
Q Consensus 365 ~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 439 (496)
...+.|||.|||||+.. +.+|+.++||||||++|.||..+.+|-..+++ +..-+....-.++.--.
T Consensus 187 RDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnp---------MRVllKiaKSePPTLlq 257 (1187)
T KOG0579|consen 187 RDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNP---------MRVLLKIAKSEPPTLLQ 257 (1187)
T ss_pred hccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccch---------HHHHHHHhhcCCCcccC
Confidence 66789999999999864 56899999999999999999999999654332 11111112222233334
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccC
Q 011005 440 VIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKT 478 (496)
Q Consensus 440 ~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~ 478 (496)
+..+...+.+++.+||..||+.||++.++++|+|+....
T Consensus 258 PS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~Hpfv~~~~ 296 (1187)
T KOG0579|consen 258 PSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKHPFVQNAP 296 (1187)
T ss_pred cchhhhHHHHHHHHHHhcCCccCCCHHHHhhCcccccCC
Confidence 566777899999999999999999999999999997543
No 112
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=3.5e-40 Score=314.65 Aligned_cols=254 Identities=26% Similarity=0.424 Sum_probs=204.6
Q ss_pred hCCCCcceeeecCCeeEEEEEeCC------CcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEE
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLPN------GKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMF 278 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 278 (496)
++|.+.+.||+|+||.||+|...+ ++.||+|.++.....+..+.+.+|+++++.++|+||+++++++......+
T Consensus 5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 84 (280)
T cd05049 5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPPI 84 (280)
T ss_pred HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCeE
Confidence 568889999999999999997643 47899999987655445578899999999999999999999999999999
Q ss_pred EEEEecCCCChhhhhhCCC-----------CCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCe
Q 011005 279 LIYEYMERGSLFCNLHNNE-----------DAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEA 347 (496)
Q Consensus 279 lV~e~~~~g~L~~~l~~~~-----------~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~ 347 (496)
+||||+++++|.+++.... ....+++..+..++.|++.|+.||| +.+++||||||+||+++.++.+
T Consensus 85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH---~~~i~h~dlkp~nili~~~~~~ 161 (280)
T cd05049 85 MVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLA---SQHFVHRDLATRNCLVGYDLVV 161 (280)
T ss_pred EEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHh---hCCeeccccccceEEEcCCCeE
Confidence 9999999999999987542 1235788999999999999999999 7899999999999999999999
Q ss_pred EEccccccccccCCCC--CccccccccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccCCCCCCcchh
Q 011005 348 FVADFGTARLLHADSS--NRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSSDPKIML 424 (496)
Q Consensus 348 kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~~~~~~~ 424 (496)
+|+|||+++....... ......+++.|+|||++.+..++.++||||+|+++|||++ |+.||.... .....
T Consensus 162 kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~-------~~~~~ 234 (280)
T cd05049 162 KIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLS-------NEEVI 234 (280)
T ss_pred EECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCC-------HHHHH
Confidence 9999999976533221 1223345778999999999999999999999999999998 999985321 11122
Q ss_pred HhhhcCCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHH
Q 011005 425 IDVLDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEF 472 (496)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~ 472 (496)
............. .....+.+++.+||+.||++||++.|+++.+
T Consensus 235 ~~~~~~~~~~~~~----~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l 278 (280)
T cd05049 235 ECITQGRLLQRPR----TCPSEVYDIMLGCWKRDPQQRINIKDIHERL 278 (280)
T ss_pred HHHHcCCcCCCCC----CCCHHHHHHHHHHcCCCcccCCCHHHHHHHh
Confidence 2222222222111 1223577999999999999999999999876
No 113
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=2.6e-40 Score=337.56 Aligned_cols=255 Identities=22% Similarity=0.252 Sum_probs=204.2
Q ss_pred CCCCcceeeecCCeeEEEEEeC-C-CcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEe
Q 011005 206 DFDIRYCIGTGGYGSVYKAQLP-N-GKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEY 283 (496)
Q Consensus 206 ~~~~~~~lg~G~~g~Vy~~~~~-~-~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~ 283 (496)
.|.+.+.||+|++|.||+|... + ++.||+|.+..... .....+.+|+.+++.++||||+++++++..++..++||||
T Consensus 68 ~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~-~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~ 146 (478)
T PTZ00267 68 MYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDE-RQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEY 146 (478)
T ss_pred eEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCH-HHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEEC
Confidence 4888999999999999999654 3 57788887655432 2335678899999999999999999999999999999999
Q ss_pred cCCCChhhhhhCC-CCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCC
Q 011005 284 MERGSLFCNLHNN-EDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADS 362 (496)
Q Consensus 284 ~~~g~L~~~l~~~-~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 362 (496)
+++|+|.+++... .....+++..+..++.|++.||.||| +.+|+||||||+|||++.++.+||+|||+++......
T Consensus 147 ~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH---~~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~ 223 (478)
T PTZ00267 147 GSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVH---SRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSV 223 (478)
T ss_pred CCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---hCCEEECCcCHHhEEECCCCcEEEEeCcCceecCCcc
Confidence 9999999887643 22335889999999999999999999 7899999999999999999999999999998764332
Q ss_pred C--CccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhH
Q 011005 363 S--NRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKV 440 (496)
Q Consensus 363 ~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 440 (496)
. .....+||+.|+|||++.+..++.++||||+||++|+|++|+.||.... ..............+.. .
T Consensus 224 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~-------~~~~~~~~~~~~~~~~~-~-- 293 (478)
T PTZ00267 224 SLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPS-------QREIMQQVLYGKYDPFP-C-- 293 (478)
T ss_pred ccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCC-------HHHHHHHHHhCCCCCCC-c--
Confidence 2 1334569999999999999999999999999999999999999986321 11122222222221111 1
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHh
Q 011005 441 IRDILLISTVSFACLQSNPKSRPTMQSVSQEFLIT 475 (496)
Q Consensus 441 ~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~ 475 (496)
.....+.+++.+||+.||++||++.+++++.|..
T Consensus 294 -~~s~~~~~li~~~L~~dP~~Rps~~~~l~~~~~~ 327 (478)
T PTZ00267 294 -PVSSGMKALLDPLLSKNPALRPTTQQLLHTEFLK 327 (478)
T ss_pred -cCCHHHHHHHHHHhccChhhCcCHHHHHhCHHHH
Confidence 1123477899999999999999999999987764
No 114
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=2.3e-40 Score=318.37 Aligned_cols=268 Identities=23% Similarity=0.352 Sum_probs=213.8
Q ss_pred hCCCCcceeeecCCeeEEEEEe-CCCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEe
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEY 283 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~ 283 (496)
.+|++.+.||+|+||.||+|.. .+++.|++|.+...... ....+.+|+.+++.++|+|++++++.+..+...++||||
T Consensus 20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~-~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~ 98 (296)
T cd06654 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQP-KKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 98 (296)
T ss_pred cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcc-hHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeecc
Confidence 5788999999999999999975 46889999988764432 236688999999999999999999999999999999999
Q ss_pred cCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCC
Q 011005 284 MERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSS 363 (496)
Q Consensus 284 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 363 (496)
+++++|.+++... .+++.++..++.|++.||+||| +.+++||||||+||+++.++.++|+|||++........
T Consensus 99 ~~~~~L~~~~~~~----~~~~~~~~~i~~ql~~aL~~LH---~~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~ 171 (296)
T cd06654 99 LAGGSLTDVVTET----CMDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS 171 (296)
T ss_pred cCCCCHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEcCCCCEEECccccchhcccccc
Confidence 9999999998643 4788999999999999999999 78999999999999999999999999999876544333
Q ss_pred CccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHHHH
Q 011005 364 NRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVIRD 443 (496)
Q Consensus 364 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 443 (496)
......+++.|+|||.+.+..++.++||||||+++|+|++|+.||..... ............+. . ......
T Consensus 172 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~-------~~~~~~~~~~~~~~-~-~~~~~~ 242 (296)
T cd06654 172 KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENP-------LRALYLIATNGTPE-L-QNPEKL 242 (296)
T ss_pred ccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCH-------HHhHHHHhcCCCCC-C-CCcccc
Confidence 33345688999999999998899999999999999999999999963221 11111111111110 0 001112
Q ss_pred HHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCCCCCccccccc
Q 011005 444 ILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTPLVKHAAIQDI 489 (496)
Q Consensus 444 ~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~~~~~~~~~~i 489 (496)
...+.+++.+||..||++|||+.|++++.|+....+......+..+
T Consensus 243 ~~~l~~li~~~l~~~p~~Rpt~~eil~~~~~~~~~~~~~~~~~~~~ 288 (296)
T cd06654 243 SAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKIAKPLSSLTPLIAA 288 (296)
T ss_pred CHHHHHHHHHHCcCCcccCcCHHHHhhChhhhccCCccccHHHHHH
Confidence 2347789999999999999999999999999887666554444433
No 115
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=6.1e-41 Score=315.93 Aligned_cols=249 Identities=34% Similarity=0.523 Sum_probs=193.0
Q ss_pred CcceeeecCCeeEEEEEeC-----CCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEe
Q 011005 209 IRYCIGTGGYGSVYKAQLP-----NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEY 283 (496)
Q Consensus 209 ~~~~lg~G~~g~Vy~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~ 283 (496)
+.+.||.|.||.||+|.+. .+..|+||.+.........+.+.+|++.+++++||||++++|++...+..++|+||
T Consensus 3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~ 82 (259)
T PF07714_consen 3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEY 82 (259)
T ss_dssp EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE-
T ss_pred EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccccccccccccccccccccccccc
Confidence 4578999999999999775 36789999997655555568899999999999999999999999988889999999
Q ss_pred cCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCC
Q 011005 284 MERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSS 363 (496)
Q Consensus 284 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 363 (496)
+++|+|.+++... ....+++..+..|+.||+.||.||| +.+++|+||+++||+++.++.+||+|||++........
T Consensus 83 ~~~g~L~~~L~~~-~~~~~~~~~~~~i~~~i~~~l~~Lh---~~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~ 158 (259)
T PF07714_consen 83 CPGGSLDDYLKSK-NKEPLSEQQRLSIAIQIAEALSYLH---SNNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSK 158 (259)
T ss_dssp -TTEBHHHHHHHT-CTTTSBHHHHHHHHHHHHHHHHHHH---HTTEEEST-SGGGEEEETTTEEEEESTTTGEETTTSSS
T ss_pred ccccccccccccc-ccccccccccccccccccccccccc---cccccccccccccccccccccccccccccccccccccc
Confidence 9999999999876 2236899999999999999999999 67899999999999999999999999999987632221
Q ss_pred C--ccccccccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhH
Q 011005 364 N--RTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKV 440 (496)
Q Consensus 364 ~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 440 (496)
. .........|+|||.+.+..++.++||||||+++||+++ |+.||... ................ ...
T Consensus 159 ~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~-------~~~~~~~~~~~~~~~~-~~~-- 228 (259)
T PF07714_consen 159 YKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDY-------DNEEIIEKLKQGQRLP-IPD-- 228 (259)
T ss_dssp EEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTS-------CHHHHHHHHHTTEETT-SBT--
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccc-------ccccccccccccccce-ecc--
Confidence 1 222446778999999999999999999999999999999 78887532 1222222222222211 111
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCHHHHHHHH
Q 011005 441 IRDILLISTVSFACLQSNPKSRPTMQSVSQEF 472 (496)
Q Consensus 441 ~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~ 472 (496)
.....+.+++.+||+.||++|||+.++++.+
T Consensus 229 -~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 229 -NCPKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp -TSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred -chhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 1123467899999999999999999999864
No 116
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=4e-40 Score=310.06 Aligned_cols=249 Identities=26% Similarity=0.428 Sum_probs=200.6
Q ss_pred hCCCCcceeeecCCeeEEEEEeCCCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEec
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEYM 284 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~~ 284 (496)
++|++.+.||+|+||.||+|.++++..+|+|.+...... ...+.+|+.++++++||||+++++++..+...++||||+
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~~~--~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~ 81 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGAMS--EEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFM 81 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEeccCceEEEEecccCCcc--HHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcC
Confidence 468889999999999999999888889999988654322 256888999999999999999999999999999999999
Q ss_pred CCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCCC
Q 011005 285 ERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSN 364 (496)
Q Consensus 285 ~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 364 (496)
++|+|.+++.... ..+++..+..++.|++.||.||| ..+++||||+|+||++++++.++|+|||.++........
T Consensus 82 ~~~~L~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~ 156 (256)
T cd05114 82 ENGCLLNYLRQRQ--GKLSKDMLLSMCQDVCEGMEYLE---RNSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYT 156 (256)
T ss_pred CCCcHHHHHHhCc--cCCCHHHHHHHHHHHHHHHHHHH---HCCccccccCcceEEEcCCCeEEECCCCCccccCCCcee
Confidence 9999999987543 25889999999999999999999 789999999999999999999999999999765432221
Q ss_pred -ccccccccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccCCCCCCcchhHhhhcC-CCCCCCChhHH
Q 011005 365 -RTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSSDPKIMLIDVLDQ-RLPPPVDRKVI 441 (496)
Q Consensus 365 -~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 441 (496)
.....++..|+|||.+.+..++.++||||||+++|+|++ |+.||.... ........... +...+.
T Consensus 157 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~-------~~~~~~~i~~~~~~~~~~----- 224 (256)
T cd05114 157 SSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKS-------NYEVVEMISRGFRLYRPK----- 224 (256)
T ss_pred ccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCC-------HHHHHHHHHCCCCCCCCC-----
Confidence 112234568999999998899999999999999999999 899986321 11111222211 111111
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCHHHHHHHH
Q 011005 442 RDILLISTVSFACLQSNPKSRPTMQSVSQEF 472 (496)
Q Consensus 442 ~~~~~l~~li~~cl~~dP~~Rps~~evl~~~ 472 (496)
.....+.+++.+||+.+|++|||++|+++.+
T Consensus 225 ~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l 255 (256)
T cd05114 225 LASMTVYEVMYSCWHEKPEGRPTFAELLRAI 255 (256)
T ss_pred CCCHHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence 1123578999999999999999999998864
No 117
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=3e-40 Score=314.13 Aligned_cols=259 Identities=31% Similarity=0.453 Sum_probs=212.4
Q ss_pred hCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEe
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEY 283 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~ 283 (496)
++|++.+.||.|++|.||+|... +++.||+|.+...........+.+|+.+++.++|+|++++++++..+...++|+||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEY 80 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEe
Confidence 36888899999999999999764 68899999987654444456788999999999999999999999999999999999
Q ss_pred cCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCC
Q 011005 284 MERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSS 363 (496)
Q Consensus 284 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 363 (496)
+++++|.+++... .+++..+..++.|++.|+.||| +.+++|+||+|+||++++++.++|+|||+++.......
T Consensus 81 ~~~~~L~~~~~~~----~~~~~~~~~~~~ql~~~l~~lh---~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~ 153 (274)
T cd06609 81 CGGGSCLDLLKPG----KLDETYIAFILREVLLGLEYLH---EEGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMS 153 (274)
T ss_pred eCCCcHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEECCCCCEEEcccccceeeccccc
Confidence 9999999998764 6789999999999999999999 78999999999999999999999999999988765433
Q ss_pred CccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHHHH
Q 011005 364 NRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVIRD 443 (496)
Q Consensus 364 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 443 (496)
......+++.|+|||.+.+..++.++||||||+++|+|++|+.||..... ...... ......+...... .
T Consensus 154 ~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~-------~~~~~~-~~~~~~~~~~~~~--~ 223 (274)
T cd06609 154 KRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHP-------MRVLFL-IPKNNPPSLEGNK--F 223 (274)
T ss_pred ccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCch-------HHHHHH-hhhcCCCCCcccc--c
Confidence 34455788899999999998999999999999999999999999863221 111111 1111111111110 2
Q ss_pred HHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCCC
Q 011005 444 ILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTPL 480 (496)
Q Consensus 444 ~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~~ 480 (496)
...+.+++.+||..+|++|||++++++|+|+.+....
T Consensus 224 ~~~~~~~l~~~l~~~p~~Rpt~~~il~~~~~~~~~~~ 260 (274)
T cd06609 224 SKPFKDFVSLCLNKDPKERPSAKELLKHKFIKKAKKT 260 (274)
T ss_pred CHHHHHHHHHHhhCChhhCcCHHHHhhChhhcCCCcc
Confidence 2347789999999999999999999999999775443
No 118
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2.2e-40 Score=306.20 Aligned_cols=258 Identities=23% Similarity=0.315 Sum_probs=217.2
Q ss_pred hCCCCcceeeecCCeeEEEEEeCC-CcEEEEEEcccch--hHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEE
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLPN-GKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIY 281 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~ 281 (496)
+.|++.+.||+|.-|+||+++..+ +..+|+|++.+.. ......++..|-+|++.++||.++.+|..++.++..|+||
T Consensus 77 ~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~m 156 (459)
T KOG0610|consen 77 RHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVM 156 (459)
T ss_pred HHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEE
Confidence 457778889999999999998764 5899999997754 2344567788999999999999999999999999999999
Q ss_pred EecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCC
Q 011005 282 EYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHAD 361 (496)
Q Consensus 282 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 361 (496)
|||+||+|..+++++.. ..+++..++-++..++-||+||| -.|||+|||||+|||+.++|++.|+||.++......
T Consensus 157 eyCpGGdL~~LrqkQp~-~~fse~~aRFYaAEvl~ALEYLH---mlGivYRDLKPENILvredGHIMLsDFDLS~~~~~~ 232 (459)
T KOG0610|consen 157 EYCPGGDLHSLRQKQPG-KRFSESAARFYAAEVLLALEYLH---MLGIVYRDLKPENILVREDGHIMLSDFDLSLRCPVS 232 (459)
T ss_pred ecCCCccHHHHHhhCCC-CccchhhHHHHHHHHHHHHHHHH---hhceeeccCCcceeEEecCCcEEeeeccccccCCCC
Confidence 99999999999887654 47999999999999999999999 789999999999999999999999999997543110
Q ss_pred --------------------------------C-C-----------------------CccccccccccccccccccCCc
Q 011005 362 --------------------------------S-S-----------------------NRTLLAGTYGYIAPELAYTMVM 385 (496)
Q Consensus 362 --------------------------------~-~-----------------------~~~~~~gt~~y~aPE~~~~~~~ 385 (496)
. . ....++||-.|+|||++.|...
T Consensus 233 Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GH 312 (459)
T KOG0610|consen 233 PTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGH 312 (459)
T ss_pred CeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCC
Confidence 0 0 0112468889999999999999
Q ss_pred CcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCC-
Q 011005 386 TEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPT- 464 (496)
Q Consensus 386 ~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps- 464 (496)
+.++|.|+||+++|||+.|..||. .........+++.+.+..+... .....+.+||.+.|.+||.+|..
T Consensus 313 gsAVDWWtfGIflYEmLyG~TPFK-------G~~~~~Tl~NIv~~~l~Fp~~~---~vs~~akDLIr~LLvKdP~kRlg~ 382 (459)
T KOG0610|consen 313 GSAVDWWTFGIFLYEMLYGTTPFK-------GSNNKETLRNIVGQPLKFPEEP---EVSSAAKDLIRKLLVKDPSKRLGS 382 (459)
T ss_pred CchhhHHHHHHHHHHHHhCCCCcC-------CCCchhhHHHHhcCCCcCCCCC---cchhHHHHHHHHHhccChhhhhcc
Confidence 999999999999999999999997 3445566777777666554433 33345789999999999999998
Q ss_pred ---HHHHHHHHHHhc
Q 011005 465 ---MQSVSQEFLITR 476 (496)
Q Consensus 465 ---~~evl~~~~~~~ 476 (496)
+.||-+|+|+..
T Consensus 383 ~rGA~eIK~HpFF~g 397 (459)
T KOG0610|consen 383 KRGAAEIKRHPFFEG 397 (459)
T ss_pred ccchHHhhcCccccC
Confidence 999999988864
No 119
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.3e-40 Score=318.24 Aligned_cols=264 Identities=27% Similarity=0.355 Sum_probs=209.7
Q ss_pred hCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEe
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEY 283 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~ 283 (496)
++|++.+.||+|+||+||+|... +++.||+|.+.........+.+.+|+++++.++||||+++++++...+..++||||
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEF 84 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEec
Confidence 56888899999999999999754 68899999887654444557789999999999999999999999999999999999
Q ss_pred cCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCC
Q 011005 284 MERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSS 363 (496)
Q Consensus 284 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 363 (496)
+++++|.+++.... .+++..+..++.+++.||.|||+ ..+++||||+|+||++++++.++|+|||++......
T Consensus 85 ~~~~~L~~~~~~~~---~~~~~~~~~~~~~i~~~l~~LH~--~~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~-- 157 (284)
T cd06620 85 MDCGSLDRIYKKGG---PIPVEILGKIAVAVVEGLTYLYN--VHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINS-- 157 (284)
T ss_pred CCCCCHHHHHHhcc---CCCHHHHHHHHHHHHHHHHHHHH--hcCeeccCCCHHHEEECCCCcEEEccCCcccchhhh--
Confidence 99999999887643 58899999999999999999995 358999999999999999999999999998654322
Q ss_pred CccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHh----hhcCCCCCCCChh
Q 011005 364 NRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLID----VLDQRLPPPVDRK 439 (496)
Q Consensus 364 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 439 (496)
......|+..|+|||++.+..++.++||||+||++|++++|+.||.................+ ......+....
T Consensus 158 ~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 235 (284)
T cd06620 158 IADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPPPRLPS-- 235 (284)
T ss_pred ccCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhccCCCCCc--
Confidence 122356889999999998889999999999999999999999999744321111111111111 11111111110
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccC
Q 011005 440 VIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKT 478 (496)
Q Consensus 440 ~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~ 478 (496)
......+.+++.+||+.||++|||+.|+++++|+.+..
T Consensus 236 -~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~~~~~ 273 (284)
T cd06620 236 -SDFPEDLRDFVDACLLKDPTERPTPQQLCAMPPFIQAL 273 (284)
T ss_pred -hhcCHHHHHHHHHHhcCCcccCcCHHHHhcCccccccc
Confidence 11223578999999999999999999999999887654
No 120
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=3.5e-40 Score=327.36 Aligned_cols=264 Identities=23% Similarity=0.272 Sum_probs=200.6
Q ss_pred CCCCcceeeecCCeeEEEEEe-CCCcEEEEEEcccch-hHHHHHHHHHHHHHHHhhcccccccccceeecCC-----eEE
Q 011005 206 DFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSE-ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKK-----CMF 278 (496)
Q Consensus 206 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-----~~~ 278 (496)
+|++.+.||+|+||.||+|.. .+++.||+|++.... .....+.+.+|+.+++.++|+||+++++++.... ..+
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence 478899999999999999976 478999999986532 2233467889999999999999999999998776 789
Q ss_pred EEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccc
Q 011005 279 LIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLL 358 (496)
Q Consensus 279 lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 358 (496)
+||||+. ++|.+.+.... .+++..+..++.||+.||.||| +.+++||||||+||+++.++.+||+|||+++..
T Consensus 81 lv~e~~~-~~l~~~~~~~~---~l~~~~~~~~~~qi~~aL~~LH---~~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~ 153 (372)
T cd07853 81 VVTELMQ-SDLHKIIVSPQ---PLSSDHVKVFLYQILRGLKYLH---SAGILHRDIKPGNLLVNSNCVLKICDFGLARVE 153 (372)
T ss_pred EEeeccc-cCHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChHHEEECCCCCEEeccccceeec
Confidence 9999996 57877776443 6899999999999999999999 789999999999999999999999999999765
Q ss_pred cCCCC-CccccccccccccccccccC-CcCcccchhhHHHHHHHHHhCCCCCccccccC---------CCCCCcc-----
Q 011005 359 HADSS-NRTLLAGTYGYIAPELAYTM-VMTEKCDVYSFGVVTLEVLMGKHPRDILSSLS---------SSSDPKI----- 422 (496)
Q Consensus 359 ~~~~~-~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~el~~g~~p~~~~~~~~---------~~~~~~~----- 422 (496)
..... ......+++.|+|||.+.+. .++.++||||+||++|||++|+.||....... .......
T Consensus 154 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~ 233 (372)
T cd07853 154 EPDESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSAC 233 (372)
T ss_pred ccCccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhh
Confidence 43222 22334678899999998874 47899999999999999999999996432110 0000000
Q ss_pred -hhHh-hhcCCCCCCCChh----HHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhc
Q 011005 423 -MLID-VLDQRLPPPVDRK----VIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITR 476 (496)
Q Consensus 423 -~~~~-~~~~~~~~~~~~~----~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~ 476 (496)
.... ........+.... .......+.+|+.+||+.||++|||+.|+++|+|+..
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~ 293 (372)
T cd07853 234 EGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAHPYLDE 293 (372)
T ss_pred HHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcCHhhCC
Confidence 0000 0000000000000 0001234678999999999999999999999999876
No 121
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=1.2e-40 Score=336.21 Aligned_cols=264 Identities=20% Similarity=0.277 Sum_probs=194.4
Q ss_pred HhCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecC--------
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHK-------- 274 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~-------- 274 (496)
..+|++.+.||+|+||.||+|... +++.||||++.... ....+|+.+++.++||||+++++++...
T Consensus 65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~-----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~ 139 (440)
T PTZ00036 65 NKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP-----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKN 139 (440)
T ss_pred CCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc-----chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCc
Confidence 357999999999999999999764 68899999886543 2235799999999999999999876432
Q ss_pred CeEEEEEEecCCCChhhhhhCC-CCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCC-CeEEccc
Q 011005 275 KCMFLIYEYMERGSLFCNLHNN-EDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKL-EAFVADF 352 (496)
Q Consensus 275 ~~~~lV~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~-~~kl~Df 352 (496)
..+++||||+++ ++.+++... .....+++..+..++.||+.||+||| +.+|+||||||+|||++.++ .+||+||
T Consensus 140 ~~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH---~~~IiHrDLKp~NILl~~~~~~vkL~DF 215 (440)
T PTZ00036 140 IFLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIH---SKFICHRDLKPQNLLIDPNTHTLKLCDF 215 (440)
T ss_pred eEEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCcCHHHEEEcCCCCceeeecc
Confidence 246799999975 676665432 22346899999999999999999999 78999999999999999664 7999999
Q ss_pred cccccccCCCCCccccccccccccccccccC-CcCcccchhhHHHHHHHHHhCCCCCccccccCC-------CCCCcchh
Q 011005 353 GTARLLHADSSNRTLLAGTYGYIAPELAYTM-VMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSS-------SSDPKIML 424 (496)
Q Consensus 353 g~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~-------~~~~~~~~ 424 (496)
|+++.+.... ......||+.|+|||++.+. .++.++||||+||++|||++|.+||........ ...+....
T Consensus 216 Gla~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~~ 294 (440)
T PTZ00036 216 GSAKNLLAGQ-RSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQ 294 (440)
T ss_pred ccchhccCCC-CcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHH
Confidence 9998764332 22345689999999998764 689999999999999999999999964321100 00000000
Q ss_pred Hhhhc-----CCCCCCCChhHH-----HHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhcc
Q 011005 425 IDVLD-----QRLPPPVDRKVI-----RDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRK 477 (496)
Q Consensus 425 ~~~~~-----~~~~~~~~~~~~-----~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~ 477 (496)
..... ...+........ .....+.+|+.+||+.||.+|||+.|+++|+|+...
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~f~~~ 357 (440)
T PTZ00036 295 LKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPFFDDL 357 (440)
T ss_pred HHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCChhHHhh
Confidence 00000 000100000000 112357899999999999999999999999998653
No 122
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=1.2e-40 Score=340.17 Aligned_cols=260 Identities=25% Similarity=0.287 Sum_probs=206.4
Q ss_pred HHhCCCCcceeeecCCeeEEEEEe-CCCcEEEEEEcccch-hHHHHHHHHHHHHHHHhhcccccccccceeecCC-----
Q 011005 203 ATEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSE-ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKK----- 275 (496)
Q Consensus 203 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~----- 275 (496)
..++|.+.+.||+|+||+||+|.. .+++.||||.+.... .......+.+|+.++..++|+|++++++.+...+
T Consensus 30 ~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~ 109 (496)
T PTZ00283 30 QAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPE 109 (496)
T ss_pred cCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCcc
Confidence 357899999999999999999965 478999999986542 2334566789999999999999999988775432
Q ss_pred ---eEEEEEEecCCCChhhhhhCCC-CCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEcc
Q 011005 276 ---CMFLIYEYMERGSLFCNLHNNE-DAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVAD 351 (496)
Q Consensus 276 ---~~~lV~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~D 351 (496)
..++||||+++|+|.+++.... ....+++..+..++.|++.||.||| +.+|+||||||+|||++.++.+||+|
T Consensus 110 ~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH---~~~IiHrDLKP~NILl~~~~~vkL~D 186 (496)
T PTZ00283 110 NVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVH---SKHMIHRDIKSANILLCSNGLVKLGD 186 (496)
T ss_pred cceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEeCCCCEEEEe
Confidence 3689999999999999887532 2346889999999999999999999 78999999999999999999999999
Q ss_pred ccccccccCCC--CCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhc
Q 011005 352 FGTARLLHADS--SNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLD 429 (496)
Q Consensus 352 fg~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 429 (496)
||+++.+.... ......+||+.|+|||++.+..++.++||||||+++|||++|+.||.... ..........
T Consensus 187 FGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~-------~~~~~~~~~~ 259 (496)
T PTZ00283 187 FGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGEN-------MEEVMHKTLA 259 (496)
T ss_pred cccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCC-------HHHHHHHHhc
Confidence 99998764321 12334579999999999999999999999999999999999999996321 1111222222
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhc
Q 011005 430 QRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITR 476 (496)
Q Consensus 430 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~ 476 (496)
....+.. . .....+.+++.+||+.||.+||++.++++|+|...
T Consensus 260 ~~~~~~~-~---~~~~~l~~li~~~L~~dP~~RPs~~ell~~p~~~~ 302 (496)
T PTZ00283 260 GRYDPLP-P---SISPEMQEIVTALLSSDPKRRPSSSKLLNMPICKL 302 (496)
T ss_pred CCCCCCC-C---CCCHHHHHHHHHHcccChhhCcCHHHHHhCHHHHH
Confidence 2221111 1 11234778999999999999999999999987654
No 123
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=2.5e-40 Score=315.03 Aligned_cols=252 Identities=23% Similarity=0.287 Sum_probs=196.0
Q ss_pred eeecCCeeEEEEEeC-CCcEEEEEEcccchh--HHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEecCCCCh
Q 011005 213 IGTGGYGSVYKAQLP-NGKVFALKKLHTSEE--LAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEYMERGSL 289 (496)
Q Consensus 213 lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~~~~g~L 289 (496)
||+|+||.||++..+ +|+.||+|.+..... ....+.+..|++++++++||||+++++++..+...++||||++|++|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 699999999999764 689999999865321 11234456799999999999999999999999999999999999999
Q ss_pred hhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCCCccccc
Q 011005 290 FCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLA 369 (496)
Q Consensus 290 ~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 369 (496)
.+.+..... ..+++..+..++.|++.||+||| +.+++||||||+||+++.++.++|+|||++....... ......
T Consensus 81 ~~~~~~~~~-~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~-~~~~~~ 155 (277)
T cd05607 81 KYHIYNVGE-RGLEMERVIHYSAQITCGILHLH---SMDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGK-TITQRA 155 (277)
T ss_pred HHHHHhccc-cCCCHHHHHHHHHHHHHHHHHHH---HCCEEEccCChHhEEEcCCCCEEEeeceeeeecCCCc-eeeccC
Confidence 888865432 25788999999999999999999 7899999999999999999999999999997764322 223356
Q ss_pred cccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHHHHHHHHHH
Q 011005 370 GTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVIRDILLIST 449 (496)
Q Consensus 370 gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 449 (496)
|++.|+|||++.+..++.++||||+||++|||++|+.||..... ..................... .....+.+
T Consensus 156 ~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~---~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 228 (277)
T cd05607 156 GTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKE---KVAKEELKRRTLEDEVKFEHQ----NFTEESKD 228 (277)
T ss_pred CCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcc---hhhHHHHHHHhhccccccccc----cCCHHHHH
Confidence 88999999999998999999999999999999999999863211 000111111111112111111 11234679
Q ss_pred HHHhcccCCCCCCCCH----HHHHHHHHHhc
Q 011005 450 VSFACLQSNPKSRPTM----QSVSQEFLITR 476 (496)
Q Consensus 450 li~~cl~~dP~~Rps~----~evl~~~~~~~ 476 (496)
++.+||+.||++||++ ++++.|.|+..
T Consensus 229 li~~~L~~~P~~R~~~~~~~~~~~~h~~f~~ 259 (277)
T cd05607 229 ICRLFLAKKPEDRLGSREKNDDPRKHEFFKT 259 (277)
T ss_pred HHHHHhccCHhhCCCCccchhhhhcChhhcC
Confidence 9999999999999999 55667777743
No 124
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=9.7e-41 Score=325.24 Aligned_cols=248 Identities=25% Similarity=0.343 Sum_probs=197.1
Q ss_pred ceeeecCCeeEEEEEeC-CCcEEEEEEcccch--hHHHHHHHHHHHH-HHHhhcccccccccceeecCCeEEEEEEecCC
Q 011005 211 YCIGTGGYGSVYKAQLP-NGKVFALKKLHTSE--ELAFIKSFKNEAQ-VLSQVLHRNIVKLYGYCLHKKCMFLIYEYMER 286 (496)
Q Consensus 211 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~-~l~~l~h~niv~~~~~~~~~~~~~lV~e~~~~ 286 (496)
+.||+|+||+||+|..+ +|+.||+|++.... .......+..|.. +++.++||||+++++++..++..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG 80 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence 35999999999999754 68999999987542 1222344555554 46778999999999999999999999999999
Q ss_pred CChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCCCcc
Q 011005 287 GSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRT 366 (496)
Q Consensus 287 g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 366 (496)
|+|..++.... .+++..+..++.||+.||+||| +.||+||||||+|||++.++.+||+|||+++..........
T Consensus 81 ~~L~~~l~~~~---~~~~~~~~~~~~qi~~al~~lH---~~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~ 154 (325)
T cd05604 81 GELFFHLQRER---SFPEPRARFYAAEIASALGYLH---SINIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSDTTT 154 (325)
T ss_pred CCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHeEECCCCCEEEeecCCcccCCCCCCCcc
Confidence 99998887543 6889999999999999999999 78999999999999999999999999999976433333344
Q ss_pred ccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHHHHHHH
Q 011005 367 LLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVIRDILL 446 (496)
Q Consensus 367 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (496)
..+||+.|+|||++.+..++.++||||+||++|+|++|+.||.... .................. ....
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~-------~~~~~~~~~~~~~~~~~~-----~~~~ 222 (325)
T cd05604 155 TFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRD-------VAEMYDNILHKPLVLRPG-----ASLT 222 (325)
T ss_pred cccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCC-------HHHHHHHHHcCCccCCCC-----CCHH
Confidence 5679999999999999999999999999999999999999986321 122222223222211111 1124
Q ss_pred HHHHHHhcccCCCCCCCCH----HHHHHHHHHhc
Q 011005 447 ISTVSFACLQSNPKSRPTM----QSVSQEFLITR 476 (496)
Q Consensus 447 l~~li~~cl~~dP~~Rps~----~evl~~~~~~~ 476 (496)
+.+++.+|++.||.+||++ .++++|+|+..
T Consensus 223 ~~~ll~~ll~~~p~~R~~~~~~~~~i~~h~~f~~ 256 (325)
T cd05604 223 AWSILEELLEKDRQRRLGAKEDFLEIQEHPFFES 256 (325)
T ss_pred HHHHHHHHhccCHHhcCCCCCCHHHHhcCCCcCC
Confidence 6688999999999999976 58999988764
No 125
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=1.9e-40 Score=323.25 Aligned_cols=247 Identities=24% Similarity=0.322 Sum_probs=194.4
Q ss_pred ceeeecCCeeEEEEEeC-CCcEEEEEEcccchh--HHHHHHHHHHH-HHHHhhcccccccccceeecCCeEEEEEEecCC
Q 011005 211 YCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEE--LAFIKSFKNEA-QVLSQVLHRNIVKLYGYCLHKKCMFLIYEYMER 286 (496)
Q Consensus 211 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~-~~l~~l~h~niv~~~~~~~~~~~~~lV~e~~~~ 286 (496)
+.||+|+||+||+|.++ +++.||+|.+..... ......+..|. .+++.++|+||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING 80 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence 36999999999999765 578899999875431 12223344444 456778999999999999999999999999999
Q ss_pred CChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCCCcc
Q 011005 287 GSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRT 366 (496)
Q Consensus 287 g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 366 (496)
|+|.+++.... .++...+..++.||+.||.||| +.||+||||||+||+++.++.++|+|||+++..........
T Consensus 81 ~~L~~~~~~~~---~~~~~~~~~~~~qi~~~L~~lH---~~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~~~~ 154 (325)
T cd05602 81 GELFYHLQRER---CFLEPRARFYAAEIASALGYLH---SLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNGTTS 154 (325)
T ss_pred CcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHeEECCCCCEEEccCCCCcccccCCCCcc
Confidence 99999987643 5788888899999999999999 78999999999999999999999999999976543333344
Q ss_pred ccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHHHHHHH
Q 011005 367 LLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVIRDILL 446 (496)
Q Consensus 367 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (496)
..+||+.|+|||++.+..++.++||||+||++|+|++|+.||.... ................. .....
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~-------~~~~~~~i~~~~~~~~~-----~~~~~ 222 (325)
T cd05602 155 TFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRN-------TAEMYDNILNKPLQLKP-----NITNS 222 (325)
T ss_pred cccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCC-------HHHHHHHHHhCCcCCCC-----CCCHH
Confidence 5679999999999999999999999999999999999999986321 11122222222221111 11224
Q ss_pred HHHHHHhcccCCCCCCCCHH----HHHHHHHHh
Q 011005 447 ISTVSFACLQSNPKSRPTMQ----SVSQEFLIT 475 (496)
Q Consensus 447 l~~li~~cl~~dP~~Rps~~----evl~~~~~~ 475 (496)
+.+++.+||+.||.+||++. ++.+|+|+.
T Consensus 223 ~~~li~~~l~~~p~~R~~~~~~~~~i~~~~~~~ 255 (325)
T cd05602 223 ARHLLEGLLQKDRTKRLGAKDDFMEIKNHIFFS 255 (325)
T ss_pred HHHHHHHHcccCHHHCCCCCCCHHHHhcCcccC
Confidence 67899999999999999876 788887763
No 126
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=1.9e-40 Score=322.65 Aligned_cols=247 Identities=23% Similarity=0.347 Sum_probs=195.3
Q ss_pred ceeeecCCeeEEEEEeC-CCcEEEEEEcccch--hHHHHHHHHHHHH-HHHhhcccccccccceeecCCeEEEEEEecCC
Q 011005 211 YCIGTGGYGSVYKAQLP-NGKVFALKKLHTSE--ELAFIKSFKNEAQ-VLSQVLHRNIVKLYGYCLHKKCMFLIYEYMER 286 (496)
Q Consensus 211 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~-~l~~l~h~niv~~~~~~~~~~~~~lV~e~~~~ 286 (496)
+.||+|+||.||+|... +++.||+|.+.... .......+.+|.. +++.++||||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG 80 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 36999999999999764 68899999987543 1222334455544 57788999999999999999999999999999
Q ss_pred CChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCCCcc
Q 011005 287 GSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRT 366 (496)
Q Consensus 287 g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 366 (496)
|+|...+.... .++...+..++.||+.||.||| ..+|+||||||+||+++.++.+||+|||+++..........
T Consensus 81 ~~L~~~l~~~~---~~~~~~~~~~~~qi~~~L~~lH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~ 154 (321)
T cd05603 81 GELFFHLQRER---CFLEPRARFYAAEVASAIGYLH---SLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEETTS 154 (321)
T ss_pred CCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeEECCCCCEEEccCCCCccCCCCCCccc
Confidence 99998887543 6788889999999999999999 78999999999999999999999999999876433333344
Q ss_pred ccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHHHHHHH
Q 011005 367 LLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVIRDILL 446 (496)
Q Consensus 367 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (496)
...||+.|+|||++.+..++.++||||+||++|||++|+.||.... .......+.......+.. ....
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~-------~~~~~~~i~~~~~~~~~~-----~~~~ 222 (321)
T cd05603 155 TFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRD-------VSQMYDNILHKPLQLPGG-----KTVA 222 (321)
T ss_pred cccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCC-------HHHHHHHHhcCCCCCCCC-----CCHH
Confidence 4678999999999999999999999999999999999999986321 122222333322221111 1224
Q ss_pred HHHHHHhcccCCCCCCCCH----HHHHHHHHHh
Q 011005 447 ISTVSFACLQSNPKSRPTM----QSVSQEFLIT 475 (496)
Q Consensus 447 l~~li~~cl~~dP~~Rps~----~evl~~~~~~ 475 (496)
+.+++.+||+.||.+||++ .|+++|+|+.
T Consensus 223 ~~~li~~~l~~~p~~R~~~~~~~~~~~~~~~~~ 255 (321)
T cd05603 223 ACDLLVGLLHKDQRRRLGAKADFLEIKNHVFFS 255 (321)
T ss_pred HHHHHHHHccCCHhhcCCCCCCHHHHhCCCCcC
Confidence 6789999999999999975 5888888764
No 127
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=6.4e-41 Score=316.08 Aligned_cols=257 Identities=30% Similarity=0.462 Sum_probs=204.3
Q ss_pred CCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchhHHH-HHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEec
Q 011005 207 FDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAF-IKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEYM 284 (496)
Q Consensus 207 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~-~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~~ 284 (496)
|++.+.||+|+||+||++..+ +++.||+|.+........ .....+|+.++++++||||+++++++......++|||++
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~ 80 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC 80 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence 567889999999999999776 466899999988654332 223456999999999999999999999999999999999
Q ss_pred CCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCCC
Q 011005 285 ERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSN 364 (496)
Q Consensus 285 ~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 364 (496)
++++|.+++.... .+++..+..++.|++.||.+|| +.+++|+||||+||+++.++.++|+|||.+.........
T Consensus 81 ~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~L~~Lh---~~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~~~~ 154 (260)
T PF00069_consen 81 PGGSLQDYLQKNK---PLSEEEILKIAYQILEALAYLH---SKGIVHRDIKPENILLDENGEVKLIDFGSSVKLSENNEN 154 (260)
T ss_dssp TTEBHHHHHHHHS---SBBHHHHHHHHHHHHHHHHHHH---HTTEEESSBSGGGEEESTTSEEEESSGTTTEESTSTTSE
T ss_pred ccccccccccccc---cccccccccccccccccccccc---ccccccccccccccccccccccccccccccccccccccc
Confidence 9999999998322 6899999999999999999999 679999999999999999999999999999765333344
Q ss_pred ccccccccccccccccc-cCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHHHH
Q 011005 365 RTLLAGTYGYIAPELAY-TMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVIRD 443 (496)
Q Consensus 365 ~~~~~gt~~y~aPE~~~-~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 443 (496)
.....+++.|+|||.+. +..++.++||||+|+++|+|++|..||..... ..................... ....
T Consensus 155 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~----~~~~~~~~~~~~~~~~~~~~~-~~~~ 229 (260)
T PF00069_consen 155 FNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNS----DDQLEIIEKILKRPLPSSSQQ-SREK 229 (260)
T ss_dssp BSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSH----HHHHHHHHHHHHTHHHHHTTS-HTTS
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccc----hhhhhhhhhcccccccccccc-cchh
Confidence 45567899999999998 88899999999999999999999999874310 001111111111111100000 0000
Q ss_pred HHHHHHHHHhcccCCCCCCCCHHHHHHHHHH
Q 011005 444 ILLISTVSFACLQSNPKSRPTMQSVSQEFLI 474 (496)
Q Consensus 444 ~~~l~~li~~cl~~dP~~Rps~~evl~~~~~ 474 (496)
...+.+++.+||+.||++|||+.++++|+|+
T Consensus 230 ~~~l~~li~~~l~~~p~~R~~~~~l~~~~~~ 260 (260)
T PF00069_consen 230 SEELRDLIKKMLSKDPEQRPSAEELLKHPWF 260 (260)
T ss_dssp HHHHHHHHHHHSSSSGGGSTTHHHHHTSGGG
T ss_pred HHHHHHHHHHHccCChhHCcCHHHHhcCCCC
Confidence 1468899999999999999999999999985
No 128
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=4.4e-40 Score=313.48 Aligned_cols=256 Identities=24% Similarity=0.356 Sum_probs=201.8
Q ss_pred HHhCCCCcceeeecCCeeEEEEEeC------CCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCe
Q 011005 203 ATEDFDIRYCIGTGGYGSVYKAQLP------NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKC 276 (496)
Q Consensus 203 ~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 276 (496)
..++|++.+.||+|+||.||+|.++ .+..||+|++...........+.+|+.+++.++|+||+++++++..+..
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~ 83 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQP 83 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence 4678999999999999999999653 3567999998654433445678899999999999999999999999999
Q ss_pred EEEEEEecCCCChhhhhhCCCC-------CccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEE
Q 011005 277 MFLIYEYMERGSLFCNLHNNED-------AVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFV 349 (496)
Q Consensus 277 ~~lV~e~~~~g~L~~~l~~~~~-------~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl 349 (496)
.++||||+++|+|.+++..... ...+++..+..++.|++.||+||| +.+++|+||||+||++++++.++|
T Consensus 84 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~~vH~dlkp~Nil~~~~~~~~l 160 (277)
T cd05062 84 TLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKI 160 (277)
T ss_pred eEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCcchheEEEcCCCCEEE
Confidence 9999999999999999875322 124678888999999999999999 779999999999999999999999
Q ss_pred ccccccccccCCCCC--ccccccccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccCCCCCCcchhHh
Q 011005 350 ADFGTARLLHADSSN--RTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSSDPKIMLID 426 (496)
Q Consensus 350 ~Dfg~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~ 426 (496)
+|||+++........ .....+++.|+|||++.+..++.++||||||+++|||++ |..||.... .......
T Consensus 161 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~-------~~~~~~~ 233 (277)
T cd05062 161 GDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMS-------NEQVLRF 233 (277)
T ss_pred CCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCC-------HHHHHHH
Confidence 999998765332211 112345678999999999999999999999999999999 788885321 1111111
Q ss_pred hhcCCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHH
Q 011005 427 VLDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEF 472 (496)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~ 472 (496)
........... .....+.+++.+||+.||++|||+.|+++.+
T Consensus 234 ~~~~~~~~~~~----~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l 275 (277)
T cd05062 234 VMEGGLLDKPD----NCPDMLFELMRMCWQYNPKMRPSFLEIISSI 275 (277)
T ss_pred HHcCCcCCCCC----CCCHHHHHHHHHHcCCChhhCcCHHHHHHHh
Confidence 11222111111 1123578999999999999999999999876
No 129
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=4.5e-40 Score=327.10 Aligned_cols=258 Identities=22% Similarity=0.362 Sum_probs=202.9
Q ss_pred HhCCCCcceeeecCCeeEEEEEeC------CCcEEEEEEcccchhHHHHHHHHHHHHHHHhhc-ccccccccceeecCCe
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLP------NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVL-HRNIVKLYGYCLHKKC 276 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~ 276 (496)
.++|.+.+.||+|+||.||+|.+. .+..||||++.........+.+.+|+++++++. ||||+++++++.....
T Consensus 36 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~~ 115 (400)
T cd05105 36 RDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGP 115 (400)
T ss_pred ccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCCc
Confidence 467889999999999999999752 234799999976554445567899999999996 9999999999999999
Q ss_pred EEEEEEecCCCChhhhhhCCCC----------------------------------------------------------
Q 011005 277 MFLIYEYMERGSLFCNLHNNED---------------------------------------------------------- 298 (496)
Q Consensus 277 ~~lV~e~~~~g~L~~~l~~~~~---------------------------------------------------------- 298 (496)
.++||||+++|+|.+++.....
T Consensus 116 ~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (400)
T cd05105 116 IYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEIK 195 (400)
T ss_pred eEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhhh
Confidence 9999999999999988865311
Q ss_pred -----------------------------------CccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecC
Q 011005 299 -----------------------------------AVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNS 343 (496)
Q Consensus 299 -----------------------------------~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~ 343 (496)
...+++..+..++.|++.||+||| +.+++||||||+||+++.
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivH~dikp~Nill~~ 272 (400)
T cd05105 196 EASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLA---SKNCVHRDLAARNVLLAQ 272 (400)
T ss_pred hhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChHhEEEeC
Confidence 124778888999999999999999 789999999999999999
Q ss_pred CCCeEEccccccccccCCCC--CccccccccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccCCCCCC
Q 011005 344 KLEAFVADFGTARLLHADSS--NRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSSDP 420 (496)
Q Consensus 344 ~~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~~~ 420 (496)
++.+||+|||+++....... ......+++.|+|||.+.+..++.++||||||+++|||++ |..||.....
T Consensus 273 ~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~------- 345 (400)
T cd05105 273 GKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIV------- 345 (400)
T ss_pred CCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccch-------
Confidence 99999999999986543222 1222346778999999999999999999999999999997 9999863211
Q ss_pred cchhHhhhcCCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHH
Q 011005 421 KIMLIDVLDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLI 474 (496)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~ 474 (496)
.................. .....+.+++.+||+.||++|||+.++.+.+..
T Consensus 346 ~~~~~~~~~~~~~~~~~~---~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~ 396 (400)
T cd05105 346 DSTFYNKIKSGYRMAKPD---HATQEVYDIMVKCWNSEPEKRPSFLHLSDIVES 396 (400)
T ss_pred hHHHHHHHhcCCCCCCCc---cCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHH
Confidence 111111111111111111 122357889999999999999999999998764
No 130
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=6.1e-40 Score=310.04 Aligned_cols=254 Identities=24% Similarity=0.368 Sum_probs=204.3
Q ss_pred hCCCCcceeeecCCeeEEEEEe-CCCcEEEEEEcccch----hHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEE
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSE----ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFL 279 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 279 (496)
++|++.+.||+|++|.||+|.. .+++.||+|.+.... .....+.+.+|++++++++||||+++++++..++..++
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 81 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI 81 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence 4688999999999999999975 468999999886532 12234568899999999999999999999999999999
Q ss_pred EEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEcccccccccc
Q 011005 280 IYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLH 359 (496)
Q Consensus 280 V~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 359 (496)
|+||+++++|.+.+.... .++...+..++.|++.||.||| ..+++|+||+|+||++++++.++|+|||+++...
T Consensus 82 v~e~~~~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~l~~lH---~~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~ 155 (263)
T cd06625 82 FMEYMPGGSVKDQLKAYG---ALTETVTRKYTRQILEGVEYLH---SNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQ 155 (263)
T ss_pred EEEECCCCcHHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeecccceecc
Confidence 999999999999987643 5788899999999999999999 7899999999999999999999999999997654
Q ss_pred CCCCCc---cccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCC
Q 011005 360 ADSSNR---TLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPV 436 (496)
Q Consensus 360 ~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (496)
...... ....++..|+|||.+.+..++.++||||+|+++|++++|+.||..... ................
T Consensus 156 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~-------~~~~~~~~~~~~~~~~ 228 (263)
T cd06625 156 TICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEA-------MAAIFKIATQPTNPQL 228 (263)
T ss_pred ccccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccch-------HHHHHHHhccCCCCCC
Confidence 322111 234577899999999999999999999999999999999999863211 1111111111111111
Q ss_pred ChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHH
Q 011005 437 DRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLI 474 (496)
Q Consensus 437 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~ 474 (496)
.. .....+.+++.+||..+|++|||+.|+++|+|+
T Consensus 229 ~~---~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~ 263 (263)
T cd06625 229 PS---HVSPDARNFLRRTFVENAKKRPSAEELLRHFFV 263 (263)
T ss_pred Cc---cCCHHHHHHHHHHhhcCcccCCCHHHHhhCCCC
Confidence 11 122346789999999999999999999999885
No 131
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=1.9e-40 Score=328.27 Aligned_cols=262 Identities=24% Similarity=0.341 Sum_probs=205.4
Q ss_pred HHHHHHhCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccch--hHHHHHHHHHHHHHHHhhcccccccccceeecCC
Q 011005 199 DLIEATEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKK 275 (496)
Q Consensus 199 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~ 275 (496)
++....++|++.+.||+|+||.||+|.++ +++.||+|.+.... .....+.+.+|+.+++.++||||+++++++..+.
T Consensus 37 ~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~ 116 (371)
T cd05622 37 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDR 116 (371)
T ss_pred hcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCC
Confidence 34445689999999999999999999765 68899999986532 2223455788999999999999999999999999
Q ss_pred eEEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEcccccc
Q 011005 276 CMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTA 355 (496)
Q Consensus 276 ~~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~ 355 (496)
..++||||+++|+|.+++... .++...+..++.||+.||.||| +++|+||||||+|||++.++.+||+|||++
T Consensus 117 ~~~lv~Ey~~gg~L~~~~~~~----~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDLkp~NIll~~~~~ikL~DfG~a 189 (371)
T cd05622 117 YLYMVMEYMPGGDLVNLMSNY----DVPEKWARFYTAEVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTC 189 (371)
T ss_pred EEEEEEcCCCCCcHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHH---HCCEEeCCCCHHHEEECCCCCEEEEeCCce
Confidence 999999999999999998753 4788888999999999999999 789999999999999999999999999999
Q ss_pred ccccCCCC-CccccccccccccccccccC----CcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcC
Q 011005 356 RLLHADSS-NRTLLAGTYGYIAPELAYTM----VMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQ 430 (496)
Q Consensus 356 ~~~~~~~~-~~~~~~gt~~y~aPE~~~~~----~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 430 (496)
........ .....+||+.|+|||++.+. .++.++||||+||++|||++|+.||.... .......+...
T Consensus 190 ~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~-------~~~~~~~i~~~ 262 (371)
T cd05622 190 MKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADS-------LVGTYSKIMNH 262 (371)
T ss_pred eEcCcCCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCC-------HHHHHHHHHcC
Confidence 87643322 22346799999999998754 37889999999999999999999996322 11122222221
Q ss_pred C--CCCCCChhHHHHHHHHHHHHHhcccCCCCC--CCCHHHHHHHHHHhcc
Q 011005 431 R--LPPPVDRKVIRDILLISTVSFACLQSNPKS--RPTMQSVSQEFLITRK 477 (496)
Q Consensus 431 ~--~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--Rps~~evl~~~~~~~~ 477 (496)
. ...+.. ......+.+++.+||..++.+ |++++|+++|+|+...
T Consensus 263 ~~~~~~~~~---~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~~~~~~ 310 (371)
T cd05622 263 KNSLTFPDD---NDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKND 310 (371)
T ss_pred CCcccCCCc---CCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCcccCCC
Confidence 1 111111 011224678889999844433 7899999999998653
No 132
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=1.6e-40 Score=314.79 Aligned_cols=256 Identities=27% Similarity=0.398 Sum_probs=202.7
Q ss_pred HhCCCCcceeeecCCeeEEEEEe-CCCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEE
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYE 282 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e 282 (496)
.++|.+.+.||+|+||.||+|.. .+++.||+|.++..... ....+.+|+.+++.++||||+++++++...+..++|||
T Consensus 8 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e 86 (267)
T cd06645 8 QEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGE-DFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICME 86 (267)
T ss_pred HHHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchh-HHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEe
Confidence 35788888999999999999965 46889999998765322 23557889999999999999999999999999999999
Q ss_pred ecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCC
Q 011005 283 YMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADS 362 (496)
Q Consensus 283 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 362 (496)
|+++++|.+++.... .+++.++..++.|++.|+.||| ..+++|+||||+||+++.++.++|+|||++.......
T Consensus 87 ~~~~~~L~~~~~~~~---~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~ 160 (267)
T cd06645 87 FCGGGSLQDIYHVTG---PLSESQIAYVSRETLQGLYYLH---SKGKMHRDIKGANILLTDNGHVKLADFGVSAQITATI 160 (267)
T ss_pred ccCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEECcceeeeEccCcc
Confidence 999999999987544 6889999999999999999999 7799999999999999999999999999997665443
Q ss_pred CCccccccccccccccccc---cCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChh
Q 011005 363 SNRTLLAGTYGYIAPELAY---TMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRK 439 (496)
Q Consensus 363 ~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 439 (496)
.......|++.|+|||.+. ...++.++||||+||++|+|++|+.||..... ..............+....
T Consensus 161 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~-------~~~~~~~~~~~~~~~~~~~ 233 (267)
T cd06645 161 AKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHP-------MRALFLMTKSNFQPPKLKD 233 (267)
T ss_pred cccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccc-------hhhHHhhhccCCCCCcccc
Confidence 3344557899999999874 45578899999999999999999999853221 1111111111111111110
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHH
Q 011005 440 VIRDILLISTVSFACLQSNPKSRPTMQSVSQEFL 473 (496)
Q Consensus 440 ~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~ 473 (496)
.......+.+++.+||+.+|++|||++++++|+|
T Consensus 234 ~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~~~~ 267 (267)
T cd06645 234 KMKWSNSFHHFVKMALTKNPKKRPTAEKLLQHPF 267 (267)
T ss_pred cCCCCHHHHHHHHHHccCCchhCcCHHHHhcCCC
Confidence 1111234678999999999999999999999876
No 133
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=2.2e-40 Score=314.76 Aligned_cols=256 Identities=26% Similarity=0.408 Sum_probs=201.7
Q ss_pred HHhCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchhHHHHHHHHHHHHHHHhh-cccccccccceeecC------
Q 011005 203 ATEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFKNEAQVLSQV-LHRNIVKLYGYCLHK------ 274 (496)
Q Consensus 203 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~------ 274 (496)
+.+.|++.+.||+|+||.||+|... +++.||+|.+..... ....+.+|+.+++++ +|+||+++++++...
T Consensus 4 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~--~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~ 81 (272)
T cd06637 4 PAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD--EEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMD 81 (272)
T ss_pred hhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCc--cHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCC
Confidence 5678899999999999999999764 688899999865432 225678899999998 699999999998753
Q ss_pred CeEEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccc
Q 011005 275 KCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGT 354 (496)
Q Consensus 275 ~~~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~ 354 (496)
...++||||+.+++|.+++.... ...+++..+..++.|++.|++||| +.+++|+||+|+||++++++.++|+|||+
T Consensus 82 ~~~~iv~e~~~~~~L~~~l~~~~-~~~l~~~~~~~~~~qi~~~l~~LH---~~~ivh~dl~~~nili~~~~~~~l~Dfg~ 157 (272)
T cd06637 82 DQLWLVMEFCGAGSVTDLIKNTK-GNTLKEEWIAYICREILRGLSHLH---QHKVIHRDIKGQNVLLTENAEVKLVDFGV 157 (272)
T ss_pred cEEEEEEEcCCCCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCHHHEEECCCCCEEEccCCC
Confidence 46899999999999999987643 235889999999999999999999 77999999999999999999999999999
Q ss_pred cccccCCCCCccccccccccccccccc-----cCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhc
Q 011005 355 ARLLHADSSNRTLLAGTYGYIAPELAY-----TMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLD 429 (496)
Q Consensus 355 ~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 429 (496)
+..............|++.|+|||++. +..++.++||||+|+++|||++|+.||...... ........
T Consensus 158 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~-------~~~~~~~~ 230 (272)
T cd06637 158 SAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPM-------RALFLIPR 230 (272)
T ss_pred ceecccccccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHH-------HHHHHHhc
Confidence 986644333344567899999999986 346788999999999999999999998633211 11111111
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHH
Q 011005 430 QRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLI 474 (496)
Q Consensus 430 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~ 474 (496)
......... .....+.+++.+||..||.+|||+.|+++|+|+
T Consensus 231 ~~~~~~~~~---~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~~ 272 (272)
T cd06637 231 NPAPRLKSK---KWSKKFQSFIESCLVKNHSQRPTTEQLMKHPFI 272 (272)
T ss_pred CCCCCCCCC---CcCHHHHHHHHHHcCCChhhCCCHHHHhhCCCC
Confidence 111111111 112247789999999999999999999999985
No 134
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=1e-39 Score=309.10 Aligned_cols=253 Identities=28% Similarity=0.398 Sum_probs=203.7
Q ss_pred hCCCCcceeeecCCeeEEEEEeCC----CcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEE
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLPN----GKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLI 280 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV 280 (496)
++|++.+.||+|+||+||+|.++. ...||+|.++..........+.+|+.++++++|+||+++++++...+..++|
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv 83 (266)
T cd05033 4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMII 83 (266)
T ss_pred HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEE
Confidence 578999999999999999997642 4579999987655444556788999999999999999999999999999999
Q ss_pred EEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccC
Q 011005 281 YEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHA 360 (496)
Q Consensus 281 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 360 (496)
|||+++++|.+++..... .+++..++.++.|++.|++||| +.+++|+||||+||++++++.++|+|||+++....
T Consensus 84 ~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~Lh---~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~ 158 (266)
T cd05033 84 TEYMENGSLDKFLRENDG--KFTVGQLVGMLRGIASGMKYLS---EMNYVHRDLAARNILVNSNLVCKVSDFGLSRRLED 158 (266)
T ss_pred EEcCCCCCHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCcceEEEcCCCCEEECccchhhcccc
Confidence 999999999999876432 6899999999999999999999 78999999999999999999999999999987752
Q ss_pred CCCCc--cccccccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccCCCCCCcchhHhhhcCCCCCCCC
Q 011005 361 DSSNR--TLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVD 437 (496)
Q Consensus 361 ~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (496)
..... ....++..|+|||.+.+..++.++||||||+++|++++ |..||.... ..............+..
T Consensus 159 ~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~-------~~~~~~~~~~~~~~~~~- 230 (266)
T cd05033 159 SEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMS-------NQDVIKAVEDGYRLPPP- 230 (266)
T ss_pred cccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCC-------HHHHHHHHHcCCCCCCC-
Confidence 22211 12234578999999999999999999999999999998 999985321 11111111111111111
Q ss_pred hhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHH
Q 011005 438 RKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFL 473 (496)
Q Consensus 438 ~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~ 473 (496)
. .....+.+++.+||+.+|++||++.|+++++.
T Consensus 231 ~---~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~ 263 (266)
T cd05033 231 M---DCPSALYQLMLDCWQKDRNERPTFSQIVSTLD 263 (266)
T ss_pred C---CCCHHHHHHHHHHcCCCcccCcCHHHHHHHHH
Confidence 1 12235779999999999999999999999875
No 135
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=6.6e-40 Score=318.29 Aligned_cols=258 Identities=24% Similarity=0.407 Sum_probs=203.6
Q ss_pred hCCCCcceeeecCCeeEEEEEeC-CCc----EEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEE
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLP-NGK----VFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFL 279 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~----~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 279 (496)
.+|++.+.||+|+||.||+|.+. +++ .||+|.+.........+.+.+|+.+++.++||||+++++++... ..++
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~~ 85 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL 85 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Ccee
Confidence 56999999999999999999753 333 48999987654444557788999999999999999999999765 4679
Q ss_pred EEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEcccccccccc
Q 011005 280 IYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLH 359 (496)
Q Consensus 280 V~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 359 (496)
|+||+++|+|.+++.... ..+++..++.++.||+.||+||| +.+++||||||+||+++.++.+||+|||+++...
T Consensus 86 v~e~~~~g~l~~~l~~~~--~~~~~~~~~~~~~qi~~~L~~LH---~~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~ 160 (316)
T cd05108 86 ITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLE---ERRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG 160 (316)
T ss_pred eeecCCCCCHHHHHHhcc--ccCCHHHHHHHHHHHHHHHHHHH---hcCeeccccchhheEecCCCcEEEcccccccccc
Confidence 999999999999998643 25788999999999999999999 7899999999999999999999999999998765
Q ss_pred CCCCCc--cccccccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccCCCCCCcchhHhhhcCCCCCCC
Q 011005 360 ADSSNR--TLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPV 436 (496)
Q Consensus 360 ~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (496)
...... ....++..|+|||.+.+..++.++||||||+++|||++ |+.||+.... .............+.
T Consensus 161 ~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~--------~~~~~~~~~~~~~~~ 232 (316)
T cd05108 161 ADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA--------SEISSILEKGERLPQ 232 (316)
T ss_pred CCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCH--------HHHHHHHhCCCCCCC
Confidence 433221 11234568999999999999999999999999999998 9999863211 111222222111111
Q ss_pred ChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCC
Q 011005 437 DRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTP 479 (496)
Q Consensus 437 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~ 479 (496)
.. .....+.+++.+||+.||++||++.+++.++....+.+
T Consensus 233 ~~---~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~~~ 272 (316)
T cd05108 233 PP---ICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDP 272 (316)
T ss_pred CC---CCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHcCC
Confidence 11 11224678999999999999999999999987766544
No 136
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=7.2e-40 Score=316.74 Aligned_cols=264 Identities=26% Similarity=0.349 Sum_probs=206.1
Q ss_pred hCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEe
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEY 283 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~ 283 (496)
++|++.+.||+|+||.||+|.+. ++..+|+|.+...........+.+|++++++++||||+++++++..++..++||||
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey 80 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEH 80 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeec
Confidence 36889999999999999999764 67889999887654444456788999999999999999999999999999999999
Q ss_pred cCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCC
Q 011005 284 MERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSS 363 (496)
Q Consensus 284 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 363 (496)
+++++|.+++.... .+++..+..++.|++.||.|||+ ..+++|+||||+||+++.++.++|+|||++......
T Consensus 81 ~~~~~L~~~l~~~~---~~~~~~~~~~~~~i~~~l~~lH~--~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~-- 153 (308)
T cd06615 81 MDGGSLDQVLKKAG---RIPENILGKISIAVLRGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS-- 153 (308)
T ss_pred cCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHh--hCCEEECCCChHHEEEecCCcEEEccCCCccccccc--
Confidence 99999999997653 68899999999999999999994 258999999999999999999999999998765332
Q ss_pred CccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCC--------CC---------------
Q 011005 364 NRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSS--------DP--------------- 420 (496)
Q Consensus 364 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~--------~~--------------- 420 (496)
......+++.|+|||.+.+..++.++||||||+++|+|++|+.||.......... ..
T Consensus 154 ~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (308)
T cd06615 154 MANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPVSGHPPDS 233 (308)
T ss_pred ccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccccccCCcccccCCCCCc
Confidence 2234568899999999988889999999999999999999999985321100000 00
Q ss_pred --cchhHhhhcC---CCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhcc
Q 011005 421 --KIMLIDVLDQ---RLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRK 477 (496)
Q Consensus 421 --~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~ 477 (496)
.....+..+. ..++... .......+.+++.+||+.||++|||+.|+++|+|+.+.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~ 293 (308)
T cd06615 234 PRPMAIFELLDYIVNEPPPKLP--SGAFSDEFQDFVDKCLKKNPKERADLKELTKHPFIKRA 293 (308)
T ss_pred cchhhHHHHHHHHhcCCCccCc--CcccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhhc
Confidence 0000000000 0000000 00112347899999999999999999999999999763
No 137
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=3.2e-40 Score=324.23 Aligned_cols=268 Identities=23% Similarity=0.267 Sum_probs=202.2
Q ss_pred HHHHhCCCCcceeeecCCeeEEEEEe-CCCcEEEEEEcccch-hHHHHHHHHHHHHHHHhhcccccccccceeecC----
Q 011005 201 IEATEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSE-ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHK---- 274 (496)
Q Consensus 201 ~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~---- 274 (496)
.+..++|++.+.||+|+||.||+|.. .+++.||||++.... .....+.+.+|+.++++++|+||+++++++...
T Consensus 11 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 90 (343)
T cd07878 11 WEVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIE 90 (343)
T ss_pred hhhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhccccccc
Confidence 34568899999999999999999965 468899999987643 223345677899999999999999999987543
Q ss_pred --CeEEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccc
Q 011005 275 --KCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADF 352 (496)
Q Consensus 275 --~~~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Df 352 (496)
...+++++++ +++|.+++... .+++..+..++.||+.||.||| +.+|+||||||+||+++.++.+||+||
T Consensus 91 ~~~~~~~~~~~~-~~~l~~~~~~~----~l~~~~~~~i~~qi~~aL~~LH---~~~ivHrdikp~Nil~~~~~~~kl~Df 162 (343)
T cd07878 91 NFNEVYLVTNLM-GADLNNIVKCQ----KLSDEHVQFLIYQLLRGLKYIH---SAGIIHRDLKPSNVAVNEDCELRILDF 162 (343)
T ss_pred ccCcEEEEeecC-CCCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---HCCeecccCChhhEEECCCCCEEEcCC
Confidence 3478999987 77888877542 5899999999999999999999 789999999999999999999999999
Q ss_pred cccccccCCCCCcccccccccccccccccc-CCcCcccchhhHHHHHHHHHhCCCCCccccccCC--------CCCCcch
Q 011005 353 GTARLLHADSSNRTLLAGTYGYIAPELAYT-MVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSS--------SSDPKIM 423 (496)
Q Consensus 353 g~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~--------~~~~~~~ 423 (496)
|+++..... .....||+.|+|||++.+ ..++.++||||+||++|+|++|+.||........ .......
T Consensus 163 g~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 239 (343)
T cd07878 163 GLARQADDE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEV 239 (343)
T ss_pred ccceecCCC---cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHH
Confidence 999865432 234568999999999877 5688999999999999999999999863221000 0000000
Q ss_pred hH-------hhhcCCCCCCCChhH----HHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCC
Q 011005 424 LI-------DVLDQRLPPPVDRKV----IRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTP 479 (496)
Q Consensus 424 ~~-------~~~~~~~~~~~~~~~----~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~ 479 (496)
.. ......++....... ......+.+++.+||+.||++|||+.|+++|+|+.....
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~hp~~~~~~~ 306 (343)
T cd07878 240 LKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAHPYFSQYHD 306 (343)
T ss_pred HHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhccCC
Confidence 00 000000000000000 001123678999999999999999999999999987543
No 138
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=8.3e-41 Score=330.34 Aligned_cols=255 Identities=24% Similarity=0.368 Sum_probs=202.2
Q ss_pred hCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccch--hHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEE
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIY 281 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~ 281 (496)
++|++.+.||+|+||.||+|..+ +++.||+|.+.... .......+.+|+.++..++|++|+++++.+..++..++||
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~ 80 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM 80 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 36888999999999999999765 68899999987543 2233466788999999999999999999999999999999
Q ss_pred EecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCC
Q 011005 282 EYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHAD 361 (496)
Q Consensus 282 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 361 (496)
||+++|+|.+++.... .++...+..++.|++.||+||| +.+|+||||||+||+++.++.++|+|||++......
T Consensus 81 E~~~gg~L~~~l~~~~---~l~~~~~~~~~~qi~~~L~~lH---~~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~ 154 (360)
T cd05627 81 EFLPGGDMMTLLMKKD---TLSEEATQFYIAETVLAIDAIH---QLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKA 154 (360)
T ss_pred eCCCCccHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---HCCeEccCCCHHHEEECCCCCEEEeeccCCcccccc
Confidence 9999999999987654 6889999999999999999999 789999999999999999999999999998754321
Q ss_pred CC-----------------------------------CccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCC
Q 011005 362 SS-----------------------------------NRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKH 406 (496)
Q Consensus 362 ~~-----------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~ 406 (496)
.. .....+||+.|+|||++.+..++.++||||+||++|||++|+.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~ 234 (360)
T cd05627 155 HRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYP 234 (360)
T ss_pred cccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCC
Confidence 00 0113468999999999999999999999999999999999999
Q ss_pred CCccccccCCCCCCcchhHhhhc--CCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCC---CHHHHHHHHHHhc
Q 011005 407 PRDILSSLSSSSDPKIMLIDVLD--QRLPPPVDRKVIRDILLISTVSFACLQSNPKSRP---TMQSVSQEFLITR 476 (496)
Q Consensus 407 p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp---s~~evl~~~~~~~ 476 (496)
||.... .......+.. ..+..+.... ....+.+++.+|+ .||.+|+ +++|+++|+|+..
T Consensus 235 Pf~~~~-------~~~~~~~i~~~~~~~~~p~~~~---~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~hp~f~~ 298 (360)
T cd05627 235 PFCSET-------PQETYRKVMNWKETLVFPPEVP---ISEKAKDLILRFC-TDSENRIGSNGVEEIKSHPFFEG 298 (360)
T ss_pred CCCCCC-------HHHHHHHHHcCCCceecCCCCC---CCHHHHHHHHHhc-cChhhcCCCCCHHHHhcCCCCCC
Confidence 996322 1122222221 1111111100 1123567777776 4999998 4899999999865
No 139
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=3.8e-40 Score=316.94 Aligned_cols=270 Identities=24% Similarity=0.355 Sum_probs=216.9
Q ss_pred HhCCCCcceeeecCCeeEEEEEe-CCCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEE
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYE 282 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e 282 (496)
..+|++.+.||+|+||.||+|.. .+++.||+|.+...... ..+.+.+|+.+++.++|+||+++++++..++..++|||
T Consensus 18 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e 96 (297)
T cd06656 18 KKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQP-KKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVME 96 (297)
T ss_pred hhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccc-hHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeec
Confidence 46799999999999999999975 57999999998754432 23567899999999999999999999999999999999
Q ss_pred ecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCC
Q 011005 283 YMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADS 362 (496)
Q Consensus 283 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 362 (496)
|+++++|.+++.+. .+++..+..++.|++.||.||| +.+++||||||+||+++.++.++|+|||++.......
T Consensus 97 ~~~~~~L~~~~~~~----~~~~~~~~~~~~~l~~~L~~LH---~~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~ 169 (297)
T cd06656 97 YLAGGSLTDVVTET----CMDEGQIAAVCRECLQALDFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ 169 (297)
T ss_pred ccCCCCHHHHHHhC----CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEECcCccceEccCCc
Confidence 99999999998653 4788899999999999999999 7899999999999999999999999999997664443
Q ss_pred CCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHHH
Q 011005 363 SNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVIR 442 (496)
Q Consensus 363 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (496)
.......+++.|+|||.+.+..++.++||||+|+++|++++|+.||....... ..........+. . .....
T Consensus 170 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~-------~~~~~~~~~~~~-~-~~~~~ 240 (297)
T cd06656 170 SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLR-------ALYLIATNGTPE-L-QNPER 240 (297)
T ss_pred cCcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcch-------heeeeccCCCCC-C-CCccc
Confidence 33344568889999999999999999999999999999999999996322110 000000010000 0 00111
Q ss_pred HHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCCCCCcccccccc
Q 011005 443 DILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTPLVKHAAIQDIS 490 (496)
Q Consensus 443 ~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~~~~~~~~~~i~ 490 (496)
....+.+++.+||+.+|++||+++++++|+|+....+..+....+.|.
T Consensus 241 ~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~~~~~~~~~~~~ 288 (297)
T cd06656 241 LSAVFRDFLNRCLEMDVDRRGSAKELLQHPFLKLAKPLSSLTPLIIAA 288 (297)
T ss_pred cCHHHHHHHHHHccCChhhCcCHHHHhcCchhcccccccccCHHHHHH
Confidence 223467899999999999999999999999999888877766555443
No 140
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=3e-40 Score=322.37 Aligned_cols=258 Identities=26% Similarity=0.351 Sum_probs=200.1
Q ss_pred hCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccch--hHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEE
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIY 281 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~ 281 (496)
++|++.+.||+|+||+||++..+ +++.||+|.+.... .....+.+.+|+.+++.++|+||+++++++..++..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM 80 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence 47899999999999999999765 58899999987532 2233456788999999999999999999999999999999
Q ss_pred EecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCC
Q 011005 282 EYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHAD 361 (496)
Q Consensus 282 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 361 (496)
||+++|+|.+++.+.. ..+++..+..++.||+.||+||| +++|+||||||+|||++.++.++|+|||++......
T Consensus 81 e~~~g~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 155 (331)
T cd05597 81 DYYVGGDLLTLLSKFE--DRLPEDMARFYLAEMVLAIDSVH---QLGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLAD 155 (331)
T ss_pred ecCCCCcHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---hCCeEECCCCHHHEEECCCCCEEEEECCceeecCCC
Confidence 9999999999997532 25788999999999999999999 789999999999999999999999999999766433
Q ss_pred CCC-cccccccccccccccccc-----CCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCC--CC
Q 011005 362 SSN-RTLLAGTYGYIAPELAYT-----MVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQR--LP 433 (496)
Q Consensus 362 ~~~-~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~ 433 (496)
... .....||+.|+|||++.. ..++.++||||+||++|+|++|+.||..... ......+.... ..
T Consensus 156 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~-------~~~~~~i~~~~~~~~ 228 (331)
T cd05597 156 GTVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESL-------VETYGKIMNHKEHFQ 228 (331)
T ss_pred CCccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCH-------HHHHHHHHcCCCccc
Confidence 222 223468999999999873 4578899999999999999999999863211 11111121111 11
Q ss_pred CCCChhHHHHHHHHHHHHHhcccCCCC--CCCCHHHHHHHHHHhc
Q 011005 434 PPVDRKVIRDILLISTVSFACLQSNPK--SRPTMQSVSQEFLITR 476 (496)
Q Consensus 434 ~~~~~~~~~~~~~l~~li~~cl~~dP~--~Rps~~evl~~~~~~~ 476 (496)
.+.. .......+.+++.+|+..+++ .||+++++++|+|+..
T Consensus 229 ~~~~--~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~hp~~~~ 271 (331)
T cd05597 229 FPPD--VTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDHPFFEG 271 (331)
T ss_pred CCCc--cCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCCCCCC
Confidence 1110 001122456778887755443 4889999999999854
No 141
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=5e-40 Score=309.28 Aligned_cols=253 Identities=30% Similarity=0.460 Sum_probs=207.1
Q ss_pred hCCCCcceeeecCCeeEEEEEeCC-CcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEe
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLPN-GKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEY 283 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~ 283 (496)
++|++.+.||+|+||.||+|...+ ++.+++|.+..... .+.+.+|++++++++|+||+++++++..+...++++||
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~---~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~ 79 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED---LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEY 79 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH---HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEec
Confidence 578899999999999999998764 78999999876543 46789999999999999999999999999999999999
Q ss_pred cCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCC
Q 011005 284 MERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSS 363 (496)
Q Consensus 284 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 363 (496)
+++++|.+++.... ..+++..+..++.|++.|+.||| ..+++|+||+|+||+++.++.++|+|||++........
T Consensus 80 ~~~~~L~~~l~~~~--~~l~~~~~~~~~~~l~~~l~~lh---~~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~ 154 (256)
T cd06612 80 CGAGSVSDIMKITN--KTLTEEEIAAILYQTLKGLEYLH---SNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMA 154 (256)
T ss_pred CCCCcHHHHHHhCc--cCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcceEEECCCCcEEEcccccchhcccCcc
Confidence 99999999987533 36899999999999999999999 77999999999999999999999999999987654433
Q ss_pred CccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHHHH
Q 011005 364 NRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVIRD 443 (496)
Q Consensus 364 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 443 (496)
......++..|+|||++.+..++.++||||||+++|+|++|+.||...... ...... ......... .....
T Consensus 155 ~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~-------~~~~~~-~~~~~~~~~-~~~~~ 225 (256)
T cd06612 155 KRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPM-------RAIFMI-PNKPPPTLS-DPEKW 225 (256)
T ss_pred ccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchh-------hhhhhh-ccCCCCCCC-chhhc
Confidence 334455788999999999999999999999999999999999998643221 011111 111111111 11112
Q ss_pred HHHHHHHHHhcccCCCCCCCCHHHHHHHHHH
Q 011005 444 ILLISTVSFACLQSNPKSRPTMQSVSQEFLI 474 (496)
Q Consensus 444 ~~~l~~li~~cl~~dP~~Rps~~evl~~~~~ 474 (496)
...+.+++.+||+.||++|||+.|+++|+|+
T Consensus 226 ~~~~~~~i~~~l~~~P~~Rps~~~il~~~~~ 256 (256)
T cd06612 226 SPEFNDFVKKCLVKDPEERPSAIQLLQHPFI 256 (256)
T ss_pred CHHHHHHHHHHHhcChhhCcCHHHHhcCCCC
Confidence 2347889999999999999999999999874
No 142
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=2.4e-40 Score=316.69 Aligned_cols=265 Identities=22% Similarity=0.253 Sum_probs=200.9
Q ss_pred CCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccch-hHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEe
Q 011005 206 DFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSE-ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEY 283 (496)
Q Consensus 206 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~ 283 (496)
+|++.+.||+|++|.||+|..+ +++.||+|++.... .......+.+|+.++++++||||+++++++..++..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEF 80 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEec
Confidence 4788899999999999999764 68999999986543 222335678899999999999999999999999999999999
Q ss_pred cCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCC
Q 011005 284 MERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSS 363 (496)
Q Consensus 284 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 363 (496)
++ ++|.+++........+++..+..++.|++.||+||| +.+++|+||+|+||+++.++.++|+|||++........
T Consensus 81 ~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~ 156 (285)
T cd07861 81 LS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCH---SRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPVR 156 (285)
T ss_pred CC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHH---hCCeeecCCCHHHEEEcCCCcEEECcccceeecCCCcc
Confidence 97 588888876554457899999999999999999999 78999999999999999999999999999976543333
Q ss_pred CccccccccccccccccccC-CcCcccchhhHHHHHHHHHhCCCCCccccccCC---------CCCC----cchhHhhhc
Q 011005 364 NRTLLAGTYGYIAPELAYTM-VMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSS---------SSDP----KIMLIDVLD 429 (496)
Q Consensus 364 ~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~---------~~~~----~~~~~~~~~ 429 (496)
......+++.|+|||.+.+. .++.++||||+|+++|+|++|+.||........ .... .........
T Consensus 157 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (285)
T cd07861 157 VYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDYK 236 (285)
T ss_pred cccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHHH
Confidence 33334578899999988654 578899999999999999999999863221000 0000 000000000
Q ss_pred CCCCCCC----ChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHH
Q 011005 430 QRLPPPV----DRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLI 474 (496)
Q Consensus 430 ~~~~~~~----~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~ 474 (496)
...+... ..........+.+++.+||+.||++|||+.++++|+|+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~~~~ 285 (285)
T cd07861 237 NTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNHPYF 285 (285)
T ss_pred hhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcCCCC
Confidence 0000000 00000012346789999999999999999999999874
No 143
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=7.9e-40 Score=309.02 Aligned_cols=256 Identities=29% Similarity=0.434 Sum_probs=207.4
Q ss_pred hCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEe
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEY 283 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~ 283 (496)
++|++.+.||+|+||.||+|... +++.+++|.+...... ..+.+.+|++++++++||||+++++++..+...+++|||
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~ 81 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGD-DFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEY 81 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchh-hHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeC
Confidence 57889999999999999999764 5788999998765432 457789999999999999999999999999999999999
Q ss_pred cCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCC
Q 011005 284 MERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSS 363 (496)
Q Consensus 284 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 363 (496)
+++++|.+++.... ..++...+..++.|++.||.||| ..+++|+||+|+||+++.++.++|+|||.+........
T Consensus 82 ~~~~~l~~~~~~~~--~~l~~~~~~~~~~ql~~~l~~lh---~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~ 156 (262)
T cd06613 82 CGGGSLQDIYQVTR--GPLSELQIAYVCRETLKGLAYLH---ETGKIHRDIKGANILLTEDGDVKLADFGVSAQLTATIA 156 (262)
T ss_pred CCCCcHHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHH---hCCceecCCChhhEEECCCCCEEECccccchhhhhhhh
Confidence 99999999887642 26889999999999999999999 78999999999999999999999999999987654333
Q ss_pred CccccccccccccccccccC---CcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhH
Q 011005 364 NRTLLAGTYGYIAPELAYTM---VMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKV 440 (496)
Q Consensus 364 ~~~~~~gt~~y~aPE~~~~~---~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 440 (496)
......++..|+|||.+.+. .++.++||||+|+++|+|++|+.||..... ....................
T Consensus 157 ~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~-------~~~~~~~~~~~~~~~~~~~~ 229 (262)
T cd06613 157 KRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHP-------MRALFLISKSNFPPPKLKDK 229 (262)
T ss_pred ccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCH-------HHHHHHHHhccCCCccccch
Confidence 33445688899999998876 888999999999999999999999863221 11111111121111111112
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHH
Q 011005 441 IRDILLISTVSFACLQSNPKSRPTMQSVSQEFL 473 (496)
Q Consensus 441 ~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~ 473 (496)
......+.+++.+||+.+|.+|||+.+++.|.|
T Consensus 230 ~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~ 262 (262)
T cd06613 230 EKWSPVFHDFIKKCLTKDPKKRPTATKLLQHPF 262 (262)
T ss_pred hhhhHHHHHHHHHHcCCChhhCCCHHHHhcCCC
Confidence 233446889999999999999999999998865
No 144
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=3.8e-40 Score=315.06 Aligned_cols=258 Identities=23% Similarity=0.295 Sum_probs=203.5
Q ss_pred CCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccch--hHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEE
Q 011005 206 DFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYE 282 (496)
Q Consensus 206 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e 282 (496)
.|+..+.||+|+||.||+|... +++.||+|.+.... .......+.+|+.++++++|++++++++.+...+..++|||
T Consensus 1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e 80 (285)
T cd05630 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEE
Confidence 3677889999999999999664 68899999986542 12223456789999999999999999999999999999999
Q ss_pred ecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCC
Q 011005 283 YMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADS 362 (496)
Q Consensus 283 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 362 (496)
|+++++|.+++..... ..+++..+..++.|++.||.||| +.+++||||||+||+++.++.++|+|||++.......
T Consensus 81 ~~~g~~L~~~l~~~~~-~~l~~~~~~~~~~qi~~~l~~lH---~~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~ 156 (285)
T cd05630 81 LMNGGDLKFHIYHMGE-AGFEEGRAVFYAAEICCGLEDLH---QERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ 156 (285)
T ss_pred ecCCCcHHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCCCHHHEEECCCCCEEEeeccceeecCCCc
Confidence 9999999988865332 35889999999999999999999 7899999999999999999999999999997653322
Q ss_pred CCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHHH
Q 011005 363 SNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVIR 442 (496)
Q Consensus 363 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (496)
......|++.|+|||.+.+..++.++||||+|+++|+|++|+.||..... ............ ........ .
T Consensus 157 -~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~----~~~~~~~~~~~~-~~~~~~~~---~ 227 (285)
T cd05630 157 -TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKK----KIKREEVERLVK-EVQEEYSE---K 227 (285)
T ss_pred -cccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCc----cchHHHHHhhhh-hhhhhcCc---c
Confidence 22334689999999999999999999999999999999999999963211 000001111111 01110000 1
Q ss_pred HHHHHHHHHHhcccCCCCCCCC-----HHHHHHHHHHhc
Q 011005 443 DILLISTVSFACLQSNPKSRPT-----MQSVSQEFLITR 476 (496)
Q Consensus 443 ~~~~l~~li~~cl~~dP~~Rps-----~~evl~~~~~~~ 476 (496)
....+.+++.+||+.||++||| ++|+++|+|+..
T Consensus 228 ~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h~~~~~ 266 (285)
T cd05630 228 FSPDARSLCKMLLCKDPKERLGCQGGGAREVKEHPLFKQ 266 (285)
T ss_pred CCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcChhhhc
Confidence 1224678999999999999999 999999999865
No 145
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=8e-40 Score=319.79 Aligned_cols=259 Identities=24% Similarity=0.369 Sum_probs=201.9
Q ss_pred HhCCCCcceeeecCCeeEEEEEeC------CCcEEEEEEcccchhHHHHHHHHHHHHHHHhh-cccccccccceeecC-C
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLP------NGKVFALKKLHTSEELAFIKSFKNEAQVLSQV-LHRNIVKLYGYCLHK-K 275 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~-~ 275 (496)
.++|++.+.||+|+||.||+|... .++.||+|++.........+.+.+|+.+++++ +|+||+++++++... .
T Consensus 6 ~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~ 85 (337)
T cd05054 6 RDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGG 85 (337)
T ss_pred HHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCC
Confidence 457999999999999999999532 35789999997654444456778999999999 799999999988654 5
Q ss_pred eEEEEEEecCCCChhhhhhCCCC---------------------------------------------------------
Q 011005 276 CMFLIYEYMERGSLFCNLHNNED--------------------------------------------------------- 298 (496)
Q Consensus 276 ~~~lV~e~~~~g~L~~~l~~~~~--------------------------------------------------------- 298 (496)
..+++|||+++++|.+++.....
T Consensus 86 ~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (337)
T cd05054 86 PLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDEL 165 (337)
T ss_pred CEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHH
Confidence 68899999999999998864221
Q ss_pred -CccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCCC--ccccccccccc
Q 011005 299 -AVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSN--RTLLAGTYGYI 375 (496)
Q Consensus 299 -~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~gt~~y~ 375 (496)
...+++..+..++.||+.||+||| +.+|+||||||+||+++.++.++|+|||++..+...... .....++..|+
T Consensus 166 ~~~~l~~~~~~~~~~qi~~aL~~lH---~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~ 242 (337)
T cd05054 166 YKEPLTLEDLISYSFQVARGMEFLA---SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWM 242 (337)
T ss_pred hhcCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCcccc
Confidence 125789999999999999999999 789999999999999999999999999999876433221 22234567899
Q ss_pred cccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHHHHHHHHHHHHHhc
Q 011005 376 APELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVIRDILLISTVSFAC 454 (496)
Q Consensus 376 aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 454 (496)
|||++.+..++.++||||+||++|||++ |..||.... ........+.......... .....+.+++.+|
T Consensus 243 aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~-------~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~c 312 (337)
T cd05054 243 APESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQ-------IDEEFCRRLKEGTRMRAPE---YATPEIYSIMLDC 312 (337)
T ss_pred CcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCC-------ccHHHHHHHhccCCCCCCc---cCCHHHHHHHHHH
Confidence 9999999999999999999999999998 999986321 1111212222211111111 1123477899999
Q ss_pred ccCCCCCCCCHHHHHHHHHHh
Q 011005 455 LQSNPKSRPTMQSVSQEFLIT 475 (496)
Q Consensus 455 l~~dP~~Rps~~evl~~~~~~ 475 (496)
|+.+|++||++.|+++++-..
T Consensus 313 l~~~p~~RPs~~ell~~l~~~ 333 (337)
T cd05054 313 WHNNPEDRPTFSELVEILGDL 333 (337)
T ss_pred ccCChhhCcCHHHHHHHHHHH
Confidence 999999999999999998643
No 146
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=1.2e-39 Score=310.59 Aligned_cols=257 Identities=28% Similarity=0.428 Sum_probs=209.9
Q ss_pred hCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEe
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEY 283 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~ 283 (496)
+.|+..+.||+|+||.||+|... +++.||+|.+...........+.+|++++++++|+||+++++++..+...++||||
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEY 83 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEec
Confidence 45778889999999999999764 58899999987654444557789999999999999999999999999999999999
Q ss_pred cCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCC
Q 011005 284 MERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSS 363 (496)
Q Consensus 284 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 363 (496)
+++|+|.+++... .++...+..++.|++.|++||| ..+++|+||+|+||+++.++.++++|||++........
T Consensus 84 ~~~~~L~~~i~~~----~l~~~~~~~~~~~l~~~l~~lh---~~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~ 156 (277)
T cd06640 84 LGGGSALDLLRAG----PFDEFQIATMLKEILKGLDYLH---SEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI 156 (277)
T ss_pred CCCCcHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---hCCccCcCCChhhEEEcCCCCEEEcccccceeccCCcc
Confidence 9999999988653 5788889999999999999999 78999999999999999999999999999977644333
Q ss_pred CccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHHHH
Q 011005 364 NRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVIRD 443 (496)
Q Consensus 364 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 443 (496)
......++..|+|||++.+..++.++|+||||+++|||++|+.||...... . .........++.. ....
T Consensus 157 ~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~-------~-~~~~~~~~~~~~~---~~~~ 225 (277)
T cd06640 157 KRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPM-------R-VLFLIPKNNPPTL---TGEF 225 (277)
T ss_pred ccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChH-------h-HhhhhhcCCCCCC---chhh
Confidence 333456788999999999888999999999999999999999998643211 0 1111111111111 1123
Q ss_pred HHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCC
Q 011005 444 ILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTP 479 (496)
Q Consensus 444 ~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~ 479 (496)
...+.+++.+||+.+|++||++.++++|.|+.+...
T Consensus 226 ~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~ 261 (277)
T cd06640 226 SKPFKEFIDACLNKDPSFRPTAKELLKHKFIVKNAK 261 (277)
T ss_pred hHHHHHHHHHHcccCcccCcCHHHHHhChHhhhcch
Confidence 345789999999999999999999999999876543
No 147
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=7.8e-40 Score=307.98 Aligned_cols=250 Identities=24% Similarity=0.402 Sum_probs=201.1
Q ss_pred hCCCCcceeeecCCeeEEEEEeCCCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEec
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEYM 284 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~~ 284 (496)
++|++.+.||+|+||+||+|.+.++..+|+|.+...... ...+.+|+.++++++||||+++++++......++||||+
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~~~--~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 81 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS--EDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYM 81 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCccc--HHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcC
Confidence 468888999999999999998877778999998754321 256889999999999999999999999888899999999
Q ss_pred CCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCCC
Q 011005 285 ERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSN 364 (496)
Q Consensus 285 ~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 364 (496)
.+|+|.+++..... .+++..++.++.||+.||+||| +.+++|+||||+||+++.++.+||+|||.++........
T Consensus 82 ~~~~l~~~i~~~~~--~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~ 156 (256)
T cd05113 82 SNGCLLNYLREHGK--RFQPSQLLEMCKDVCEGMAYLE---SKQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYT 156 (256)
T ss_pred CCCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHH---hCCeeccccCcceEEEcCCCCEEECCCccceecCCCcee
Confidence 99999999876432 6899999999999999999999 789999999999999999999999999999766443221
Q ss_pred c-cccccccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHHH
Q 011005 365 R-TLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVIR 442 (496)
Q Consensus 365 ~-~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (496)
. ....++..|+|||.+.+..++.++||||||+++|+|++ |+.||..... ................. .
T Consensus 157 ~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~-------~~~~~~~~~~~~~~~~~----~ 225 (256)
T cd05113 157 SSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNN-------SETVEKVSQGLRLYRPH----L 225 (256)
T ss_pred ecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCH-------HHHHHHHhcCCCCCCCC----C
Confidence 1 11234567999999998889999999999999999998 9999863221 11111222221111111 1
Q ss_pred HHHHHHHHHHhcccCCCCCCCCHHHHHHHH
Q 011005 443 DILLISTVSFACLQSNPKSRPTMQSVSQEF 472 (496)
Q Consensus 443 ~~~~l~~li~~cl~~dP~~Rps~~evl~~~ 472 (496)
....+.+++.+||+.||++||++.++++.+
T Consensus 226 ~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~ 255 (256)
T cd05113 226 ASEKVYAIMYSCWHEKAEERPTFQQLLSSI 255 (256)
T ss_pred CCHHHHHHHHHHcCCCcccCCCHHHHHHhh
Confidence 123578999999999999999999999875
No 148
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=3.7e-40 Score=336.38 Aligned_cols=271 Identities=19% Similarity=0.285 Sum_probs=200.2
Q ss_pred HHHhCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchhHHHHHHHHHHHHHHHhhccc------ccccccceeecC
Q 011005 202 EATEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHR------NIVKLYGYCLHK 274 (496)
Q Consensus 202 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~------niv~~~~~~~~~ 274 (496)
...++|.+.+.||+|+||+||+|.+. .++.||||+++.... .......|+.+++.++|. +++++++++...
T Consensus 126 ~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~--~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~ 203 (467)
T PTZ00284 126 VSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPK--YTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNE 203 (467)
T ss_pred cCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecchh--hHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcC
Confidence 35678999999999999999999764 678899999865322 224456788888887654 588888888764
Q ss_pred -CeEEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCC--------
Q 011005 275 -KCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKL-------- 345 (496)
Q Consensus 275 -~~~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~-------- 345 (496)
.+.++|||++ +++|.+++.+.. .+++..+..|+.||+.||+|||+ ..+|+||||||+|||++.++
T Consensus 204 ~~~~~iv~~~~-g~~l~~~l~~~~---~l~~~~~~~i~~qi~~aL~yLH~--~~gIiHrDlKP~NILl~~~~~~~~~~~~ 277 (467)
T PTZ00284 204 TGHMCIVMPKY-GPCLLDWIMKHG---PFSHRHLAQIIFQTGVALDYFHT--ELHLMHTDLKPENILMETSDTVVDPVTN 277 (467)
T ss_pred CceEEEEEecc-CCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHh--cCCeecCCCCHHHEEEecCCcccccccc
Confidence 5788999988 778988887543 68999999999999999999993 25999999999999998765
Q ss_pred --------CeEEccccccccccCCCCCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCC-
Q 011005 346 --------EAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSS- 416 (496)
Q Consensus 346 --------~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~- 416 (496)
.+||+|||.+.... ......+||+.|+|||++.+..++.++|||||||++|||++|+.||+.......
T Consensus 278 ~~~~~~~~~vkl~DfG~~~~~~---~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~ 354 (467)
T PTZ00284 278 RALPPDPCRVRICDLGGCCDER---HSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHL 354 (467)
T ss_pred cccCCCCceEEECCCCccccCc---cccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHH
Confidence 49999999885432 223456799999999999999999999999999999999999999964321100
Q ss_pred -------CCCCcch--------hHhhhcC--CCCCCCCh------------hHHHHHHHHHHHHHhcccCCCCCCCCHHH
Q 011005 417 -------SSDPKIM--------LIDVLDQ--RLPPPVDR------------KVIRDILLISTVSFACLQSNPKSRPTMQS 467 (496)
Q Consensus 417 -------~~~~~~~--------~~~~~~~--~~~~~~~~------------~~~~~~~~l~~li~~cl~~dP~~Rps~~e 467 (496)
...+... ....... .+.+.... ........+.+|+.+||+.||++|||++|
T Consensus 355 ~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e 434 (467)
T PTZ00284 355 HLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQ 434 (467)
T ss_pred HHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHH
Confidence 0000000 0000000 00000000 00011234679999999999999999999
Q ss_pred HHHHHHHhccCCCCCc
Q 011005 468 VSQEFLITRKTPLVKH 483 (496)
Q Consensus 468 vl~~~~~~~~~~~~~~ 483 (496)
+++|+|+....+..+.
T Consensus 435 ~L~Hp~~~~~~~~~~~ 450 (467)
T PTZ00284 435 MTTHPYVLKYYPECRQ 450 (467)
T ss_pred HhcCccccccCCcccc
Confidence 9999999987765433
No 149
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=1.4e-39 Score=308.25 Aligned_cols=260 Identities=22% Similarity=0.286 Sum_probs=206.8
Q ss_pred hCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccch--hHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEE
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIY 281 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~ 281 (496)
++|++.+.||+|+||.||+|..+ +++.||+|.+.... .......+.+|+++++.++||||+++++++...+..++|+
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL 81 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence 47899999999999999999764 78999999876422 2334466889999999999999999999999999999999
Q ss_pred EecCCCChhhhhhCCCC-CccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccC
Q 011005 282 EYMERGSLFCNLHNNED-AVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHA 360 (496)
Q Consensus 282 e~~~~g~L~~~l~~~~~-~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 360 (496)
||+++|+|.+++..... ...++...+..++.|++.||+||| ..+++|+||+|+||+++.++.++|+|||++.....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~ 158 (267)
T cd08228 82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHh---hCCeeCCCCCHHHEEEcCCCCEEECccccceeccc
Confidence 99999999988864321 235788999999999999999999 78999999999999999999999999999987654
Q ss_pred CCCCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhH
Q 011005 361 DSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKV 440 (496)
Q Consensus 361 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 440 (496)
.........+++.|+|||.+.+..++.++|+||+|+++|+|++|+.||.... .........+.....++.. .
T Consensus 159 ~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~------~~~~~~~~~~~~~~~~~~~--~ 230 (267)
T cd08228 159 KTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDK------MNLFSLCQKIEQCDYPPLP--T 230 (267)
T ss_pred hhHHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCcccc------ccHHHHHHHHhcCCCCCCC--h
Confidence 3333334568889999999998889999999999999999999999985211 1111122222221111111 1
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHh
Q 011005 441 IRDILLISTVSFACLQSNPKSRPTMQSVSQEFLIT 475 (496)
Q Consensus 441 ~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~ 475 (496)
......+.+++.+||+.+|++||++.++++.+...
T Consensus 231 ~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~ 265 (267)
T cd08228 231 EHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQM 265 (267)
T ss_pred hhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHh
Confidence 12234578999999999999999999999987654
No 150
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=8.7e-40 Score=308.64 Aligned_cols=253 Identities=25% Similarity=0.409 Sum_probs=203.4
Q ss_pred HhCCCCcceeeecCCeeEEEEEeCCCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEe
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEY 283 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~ 283 (496)
.++|++.+.||+|+||.||+|...+++.||+|.+..... ..+.+.+|+.++++++|+||+++++++...+..++||||
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 82 (261)
T cd05072 5 RESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTM--SVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEY 82 (261)
T ss_pred hHHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCch--hHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEec
Confidence 367899999999999999999988888999999875432 236788999999999999999999999999999999999
Q ss_pred cCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCC
Q 011005 284 MERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSS 363 (496)
Q Consensus 284 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 363 (496)
+++++|.+++.... ...+++..++.++.|++.||+||| ..+++||||||+||+++.++.++|+|||++........
T Consensus 83 ~~~~~L~~~l~~~~-~~~~~~~~~~~~~~~l~~~l~~LH---~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~ 158 (261)
T cd05072 83 MAKGSLLDFLKSDE-GGKVLLPKLIDFSAQIAEGMAYIE---RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEY 158 (261)
T ss_pred CCCCcHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccccchhhEEecCCCcEEECCCccceecCCCce
Confidence 99999999987643 236788999999999999999999 78999999999999999999999999999987643221
Q ss_pred C-ccccccccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHH
Q 011005 364 N-RTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVI 441 (496)
Q Consensus 364 ~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (496)
. .....++..|+|||.+.+..++.++||||||+++|+|++ |+.||.... ........ ......+...
T Consensus 159 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~-------~~~~~~~~-~~~~~~~~~~--- 227 (261)
T cd05072 159 TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMS-------NSDVMSAL-QRGYRMPRME--- 227 (261)
T ss_pred eccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCC-------HHHHHHHH-HcCCCCCCCC---
Confidence 1 122335668999999998889999999999999999998 999985321 11111111 1111111111
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCHHHHHHHHH
Q 011005 442 RDILLISTVSFACLQSNPKSRPTMQSVSQEFL 473 (496)
Q Consensus 442 ~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~ 473 (496)
.....+.+++.+||..+|++||+++++.+.+.
T Consensus 228 ~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 259 (261)
T cd05072 228 NCPDELYDIMKTCWKEKAEERPTFDYLQSVLD 259 (261)
T ss_pred CCCHHHHHHHHHHccCCcccCcCHHHHHHHHh
Confidence 11234778999999999999999999988764
No 151
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=6e-40 Score=309.75 Aligned_cols=254 Identities=28% Similarity=0.487 Sum_probs=207.7
Q ss_pred HHhCCCCcceeeecCCeeEEEEEeCCCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEE
Q 011005 203 ATEDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYE 282 (496)
Q Consensus 203 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e 282 (496)
...+|++.+.||+|+||.||+|..++++.+++|.+..... .....+.+|+.+++.++|+||+++++++...+..++|||
T Consensus 4 ~~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 82 (261)
T cd05148 4 PREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDL-LKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITE 82 (261)
T ss_pred cHHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccch-hhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEe
Confidence 4567999999999999999999988899999999876543 224568899999999999999999999999999999999
Q ss_pred ecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCC
Q 011005 283 YMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADS 362 (496)
Q Consensus 283 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 362 (496)
|+++++|.+++.... ...+++..+..++.|++.|++||| +.+++|+||+|+||++++++.++|+|||.+.......
T Consensus 83 ~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~al~~lH---~~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~ 158 (261)
T cd05148 83 LMEKGSLLAFLRSPE-GQVLPVASLIDMACQVAEGMAYLE---EQNSIHRDLAARNILVGEDLVCKVADFGLARLIKEDV 158 (261)
T ss_pred ecccCCHHHHHhcCC-CCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccccCcceEEEcCCceEEEccccchhhcCCcc
Confidence 999999999998653 336899999999999999999999 7799999999999999999999999999998765433
Q ss_pred CCccccccccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccCCCCCCcchhHhhhcC-CCCCCCChhH
Q 011005 363 SNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSSDPKIMLIDVLDQ-RLPPPVDRKV 440 (496)
Q Consensus 363 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 440 (496)
.......++..|+|||.+.+..++.++||||||+++|+|++ |+.||.... ........... +.+.+.
T Consensus 159 ~~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~-------~~~~~~~~~~~~~~~~~~---- 227 (261)
T cd05148 159 YLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMN-------NHEVYDQITAGYRMPCPA---- 227 (261)
T ss_pred ccccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCC-------HHHHHHHHHhCCcCCCCC----
Confidence 33333345678999999998899999999999999999998 899986322 11122222211 111111
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHH
Q 011005 441 IRDILLISTVSFACLQSNPKSRPTMQSVSQEFL 473 (496)
Q Consensus 441 ~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~ 473 (496)
.....+.+++.+||+.||++|||+.++++.+.
T Consensus 228 -~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~ 259 (261)
T cd05148 228 -KCPQEIYKIMLECWAAEPEDRPSFKALREELD 259 (261)
T ss_pred -CCCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence 11234779999999999999999999999874
No 152
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.5e-41 Score=310.48 Aligned_cols=262 Identities=24% Similarity=0.317 Sum_probs=197.4
Q ss_pred CCCCcceeeecCCeeEEEEEe-CCCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCC-----eEEE
Q 011005 206 DFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKK-----CMFL 279 (496)
Q Consensus 206 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-----~~~l 279 (496)
.|.-.+.+|.|+||.||+|.. .+++.||||+.-.+.. .-.+|+++|++++|||||++.-+|.... +..+
T Consensus 25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r-----~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnl 99 (364)
T KOG0658|consen 25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR-----YKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNL 99 (364)
T ss_pred EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCC-----cCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHH
Confidence 466678999999999999965 4579999999876542 2258999999999999999998886532 3568
Q ss_pred EEEecCCCChhhhhhCC-CCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCC-CCeEEcccccccc
Q 011005 280 IYEYMERGSLFCNLHNN-EDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSK-LEAFVADFGTARL 357 (496)
Q Consensus 280 V~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~-~~~kl~Dfg~~~~ 357 (496)
|||||+. +|...+... .....++...+.-+.+||.+||.||| +.+|+||||||.|+|+|.+ |.+||||||.|+.
T Consensus 100 VleymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh---~~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~ 175 (364)
T KOG0658|consen 100 VLEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLH---SHGICHRDIKPQNLLVDPDTGVLKICDFGSAKV 175 (364)
T ss_pred HHHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHH---hcCcccCCCChheEEEcCCCCeEEeccCCccee
Confidence 9999976 888887732 22336777888889999999999999 7899999999999999977 9999999999998
Q ss_pred ccCCCCCccccccccccccccccccC-CcCcccchhhHHHHHHHHHhCCCCCccccccC----------CCCCCcchh--
Q 011005 358 LHADSSNRTLLAGTYGYIAPELAYTM-VMTEKCDVYSFGVVTLEVLMGKHPRDILSSLS----------SSSDPKIML-- 424 (496)
Q Consensus 358 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~el~~g~~p~~~~~~~~----------~~~~~~~~~-- 424 (496)
+.....+ .....|..|+|||.+.|. .|+.+.||||.||++.||+-|++-|...+... .....+...
T Consensus 176 L~~~epn-iSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~mn 254 (364)
T KOG0658|consen 176 LVKGEPN-ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSMN 254 (364)
T ss_pred eccCCCc-eeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhcC
Confidence 8665444 456688999999998875 79999999999999999999999987433210 000000000
Q ss_pred ---HhhhcCCCCC-CCCh-hHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhcc
Q 011005 425 ---IDVLDQRLPP-PVDR-KVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRK 477 (496)
Q Consensus 425 ---~~~~~~~~~~-~~~~-~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~ 477 (496)
.+.....+.. +... ..........+|+.++|+.+|.+|.++.|++.|+|+...
T Consensus 255 ~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~fFdel 312 (364)
T KOG0658|consen 255 PNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHPFFDEL 312 (364)
T ss_pred cccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcchhhHHh
Confidence 0000000100 0000 011223457799999999999999999999999988654
No 153
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=7.6e-40 Score=311.88 Aligned_cols=255 Identities=30% Similarity=0.439 Sum_probs=206.2
Q ss_pred CCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEec
Q 011005 206 DFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEYM 284 (496)
Q Consensus 206 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~~ 284 (496)
.|+..+.||+|+||.||+|.+. +++.||+|.+.........+.+.+|++++++++||||+++++++..+...++||||+
T Consensus 5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06642 5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYL 84 (277)
T ss_pred HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEcc
Confidence 4566778999999999999654 578899998875543344567899999999999999999999999999999999999
Q ss_pred CCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCCC
Q 011005 285 ERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSN 364 (496)
Q Consensus 285 ~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 364 (496)
++++|.+++... .+++..+..++.|++.|+.||| ..+++|+||+|+||++++++.++++|||++.........
T Consensus 85 ~~~~L~~~~~~~----~~~~~~~~~~~~~i~~~l~~lH---~~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~ 157 (277)
T cd06642 85 GGGSALDLLKPG----PLEETYIATILREILKGLDYLH---SERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIK 157 (277)
T ss_pred CCCcHHHHhhcC----CCCHHHHHHHHHHHHHHHHHHh---cCCeeccCCChheEEEeCCCCEEEccccccccccCcchh
Confidence 999999888643 5788999999999999999999 789999999999999999999999999999776543323
Q ss_pred ccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHHHHH
Q 011005 365 RTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVIRDI 444 (496)
Q Consensus 365 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (496)
.....++..|+|||++.+..++.++||||||+++|||++|+.|+..... ...... .......... ....
T Consensus 158 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~-------~~~~~~-~~~~~~~~~~---~~~~ 226 (277)
T cd06642 158 RNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHP-------MRVLFL-IPKNSPPTLE---GQYS 226 (277)
T ss_pred hhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccch-------hhHHhh-hhcCCCCCCC---cccC
Confidence 3334678899999999999999999999999999999999999863221 111111 1111111111 1122
Q ss_pred HHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccC
Q 011005 445 LLISTVSFACLQSNPKSRPTMQSVSQEFLITRKT 478 (496)
Q Consensus 445 ~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~ 478 (496)
..+.+++.+||+.+|++||++.++++|+|+.+..
T Consensus 227 ~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~ 260 (277)
T cd06642 227 KPFKEFVEACLNKDPRFRPTAKELLKHKFITRYT 260 (277)
T ss_pred HHHHHHHHHHccCCcccCcCHHHHHHhHHHHHHh
Confidence 3477899999999999999999999999987643
No 154
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=5.2e-40 Score=316.85 Aligned_cols=267 Identities=20% Similarity=0.232 Sum_probs=202.7
Q ss_pred hCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEe
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEY 283 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~ 283 (496)
++|.+.+.||+|+||.||+|..+ +++.||+|.+...........+.+|+.++++++|+||+++++++..++..++||||
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~ 85 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 85 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEec
Confidence 56889999999999999999765 68899999987544333334577899999999999999999999999999999999
Q ss_pred cCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCC
Q 011005 284 MERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSS 363 (496)
Q Consensus 284 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 363 (496)
++ ++|.+++.... ..+++..+..++.|++.||.||| +.+++|+||||+||+++.++.++|+|||++........
T Consensus 86 ~~-~~l~~~l~~~~--~~~~~~~~~~~~~qi~~aL~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~ 159 (301)
T cd07873 86 LD-KDLKQYLDDCG--NSINMHNVKLFLFQLLRGLNYCH---RRKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTK 159 (301)
T ss_pred cc-cCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCHHHEEECCCCcEEECcCcchhccCCCCC
Confidence 97 58888887543 25788999999999999999999 78999999999999999999999999999976543333
Q ss_pred CccccccccccccccccccC-CcCcccchhhHHHHHHHHHhCCCCCccccccCC--------CCCCcchhHhhh------
Q 011005 364 NRTLLAGTYGYIAPELAYTM-VMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSS--------SSDPKIMLIDVL------ 428 (496)
Q Consensus 364 ~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~--------~~~~~~~~~~~~------ 428 (496)
......+++.|+|||.+.+. .++.++||||+|+++|+|++|+.||........ ............
T Consensus 160 ~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (301)
T cd07873 160 TYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFK 239 (301)
T ss_pred cccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhcccccc
Confidence 33344678899999988654 578899999999999999999999863321000 000000000000
Q ss_pred cCCCCCCCC----hhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhcc
Q 011005 429 DQRLPPPVD----RKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRK 477 (496)
Q Consensus 429 ~~~~~~~~~----~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~ 477 (496)
....+.... .........+.+++.+||+.||.+|||++|+++|+|+..-
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h~~f~~~ 292 (301)
T cd07873 240 SYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPYFHCL 292 (301)
T ss_pred ccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcCcccccc
Confidence 000000000 0000112246789999999999999999999999999543
No 155
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=1.2e-39 Score=322.79 Aligned_cols=264 Identities=23% Similarity=0.253 Sum_probs=200.0
Q ss_pred HHhCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccch-hHHHHHHHHHHHHHHHhhcccccccccceeecC------
Q 011005 203 ATEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSE-ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHK------ 274 (496)
Q Consensus 203 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~------ 274 (496)
..++|.+.+.||+|+||.||+|... .++.||||++.... .....+.+.+|+.+++.++||||+++++++...
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~ 101 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 101 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeeccccccccc
Confidence 4578999999999999999999754 68899999987542 223346678999999999999999999987543
Q ss_pred CeEEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccc
Q 011005 275 KCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGT 354 (496)
Q Consensus 275 ~~~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~ 354 (496)
...++||||+++ ++...+.. .+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+
T Consensus 102 ~~~~lv~e~~~~-~l~~~~~~-----~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~DfG~ 172 (364)
T cd07875 102 QDVYIVMELMDA-NLCQVIQM-----ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGL 172 (364)
T ss_pred CeEEEEEeCCCC-CHHHHHHh-----cCCHHHHHHHHHHHHHHHHHHh---hCCeecCCCCHHHEEECCCCcEEEEeCCC
Confidence 357999999975 67666643 4788889999999999999999 78999999999999999999999999999
Q ss_pred cccccCCCCCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCC---------CCCCcc---
Q 011005 355 ARLLHADSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSS---------SSDPKI--- 422 (496)
Q Consensus 355 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~---------~~~~~~--- 422 (496)
++..... .......+|+.|+|||++.+..++.++|||||||++|+|++|+.||........ ...+..
T Consensus 173 a~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (364)
T cd07875 173 ARTAGTS-FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKK 251 (364)
T ss_pred ccccCCC-CcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHh
Confidence 9765332 222345689999999999999999999999999999999999999964321100 000000
Q ss_pred ---hhHhhhcCCC---------------CCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhc
Q 011005 423 ---MLIDVLDQRL---------------PPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITR 476 (496)
Q Consensus 423 ---~~~~~~~~~~---------------~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~ 476 (496)
........+. ..............+.+++.+||+.||.+|||+.|+++|+|+..
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~hp~~~~ 323 (364)
T cd07875 252 LQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINV 323 (364)
T ss_pred hhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcCccccc
Confidence 0000000000 00000000011234679999999999999999999999999964
No 156
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=5.2e-40 Score=310.87 Aligned_cols=261 Identities=25% Similarity=0.355 Sum_probs=209.8
Q ss_pred hCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEe
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEY 283 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~ 283 (496)
++|+..+.||+|+||.||+|..+ +++.+|+|.+...........+.+|++++++++||||+++++.+..++..++|+||
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEY 80 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEe
Confidence 35778889999999999999775 68899999987764445557788999999999999999999999999999999999
Q ss_pred cCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCC-CCeEEeCCCCCceEecCCCCeEEccccccccccCCC
Q 011005 284 MERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCS-PSIIHRDISSNNILLNSKLEAFVADFGTARLLHADS 362 (496)
Q Consensus 284 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~-~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 362 (496)
+++++|.+++.... ..++...+..++.|++.|++||| + .+++|+||+|+||++++++.++|+|||.+.......
T Consensus 81 ~~~~~L~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lH---~~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~ 155 (265)
T cd06605 81 MDGGSLDKILKEVQ--GRIPERILGKIAVAVLKGLTYLH---EKHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSL 155 (265)
T ss_pred cCCCcHHHHHHHcc--CCCCHHHHHHHHHHHHHHHHHHc---CCCCeecCCCCHHHEEECCCCCEEEeecccchhhHHHH
Confidence 99999999987653 36888999999999999999999 6 899999999999999999999999999987664322
Q ss_pred CCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHHH
Q 011005 363 SNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVIR 442 (496)
Q Consensus 363 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (496)
.. ...++..|+|||.+.+..++.++||||+|+++|+|++|+.||...... ................+. .... .
T Consensus 156 ~~--~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~--~~~~~~~~~~~~~~~~~~-~~~~--~ 228 (265)
T cd06605 156 AK--TFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDP--PDGIFELLQYIVNEPPPR-LPSG--K 228 (265)
T ss_pred hh--cccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccc--cccHHHHHHHHhcCCCCC-CChh--h
Confidence 11 256788999999999999999999999999999999999998643210 000111111112111111 1111 1
Q ss_pred HHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhcc
Q 011005 443 DILLISTVSFACLQSNPKSRPTMQSVSQEFLITRK 477 (496)
Q Consensus 443 ~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~ 477 (496)
....+.+++.+||..||++|||+.|+++++|+++.
T Consensus 229 ~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~~~~ 263 (265)
T cd06605 229 FSPDFQDFVNLCLIKDPRERPSYKELLEHPFIKKY 263 (265)
T ss_pred cCHHHHHHHHHHcCCCchhCcCHHHHhhCchhhcc
Confidence 23347799999999999999999999999999764
No 157
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=1.6e-39 Score=310.63 Aligned_cols=255 Identities=23% Similarity=0.397 Sum_probs=202.0
Q ss_pred hCCCCcceeeecCCeeEEEEEe-----CCCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEE
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQL-----PNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFL 279 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 279 (496)
++|++.+.||+|+||.||+|.. ..+..|++|.+...........+.+|+.++++++||||+++++++..+...++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 84 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCM 84 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEE
Confidence 4688889999999999999964 35678999999765544455678899999999999999999999999999999
Q ss_pred EEEecCCCChhhhhhCCCC--------------CccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCC
Q 011005 280 IYEYMERGSLFCNLHNNED--------------AVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKL 345 (496)
Q Consensus 280 V~e~~~~g~L~~~l~~~~~--------------~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~ 345 (496)
||||+++++|.+++..... ...+++..+..++.|++.||.||| +++++||||||+||++++++
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH---~~~i~H~dlkp~nili~~~~ 161 (283)
T cd05090 85 LFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLS---SHFFVHKDLAARNILIGEQL 161 (283)
T ss_pred EEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHH---hcCeehhccccceEEEcCCC
Confidence 9999999999998853221 224788899999999999999999 77999999999999999999
Q ss_pred CeEEccccccccccCCCC--CccccccccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccCCCCCCcc
Q 011005 346 EAFVADFGTARLLHADSS--NRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSSDPKI 422 (496)
Q Consensus 346 ~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~~~~~ 422 (496)
.++|+|||+++....... ......++..|+|||++.+..++.++||||||+++|||++ |..||.... ..
T Consensus 162 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~--------~~ 233 (283)
T cd05090 162 HVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFS--------NQ 233 (283)
T ss_pred cEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCC--------HH
Confidence 999999999987643221 1222345678999999998889999999999999999998 998985321 11
Q ss_pred hhHhhhcCCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHH
Q 011005 423 MLIDVLDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFL 473 (496)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~ 473 (496)
...+........+... .....+.+++.+||+.||++||++.++++++.
T Consensus 234 ~~~~~~~~~~~~~~~~---~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~ 281 (283)
T cd05090 234 EVIEMVRKRQLLPCSE---DCPPRMYSLMTECWQEGPSRRPRFKDIHTRLR 281 (283)
T ss_pred HHHHHHHcCCcCCCCC---CCCHHHHHHHHHHcccCcccCcCHHHHHHHhh
Confidence 1222222221111111 11234778999999999999999999998863
No 158
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=1e-39 Score=312.08 Aligned_cols=258 Identities=22% Similarity=0.286 Sum_probs=203.5
Q ss_pred CCCcceeeecCCeeEEEEEe-CCCcEEEEEEcccch--hHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEe
Q 011005 207 FDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEY 283 (496)
Q Consensus 207 ~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~ 283 (496)
|+..+.||+|+||+||+|.+ .+++.||+|.+.... .......+.+|++++++++|+||+++++++..++..++||||
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEe
Confidence 66778899999999999966 468899999986543 122234567899999999999999999999999999999999
Q ss_pred cCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCC
Q 011005 284 MERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSS 363 (496)
Q Consensus 284 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 363 (496)
+++++|.+.+.... ...+++..+..++.|++.||.||| +.+|+||||||+||++++++.++|+|||++.......
T Consensus 82 ~~~~~L~~~~~~~~-~~~~~~~~~~~~~~ql~~~l~~lH---~~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~- 156 (285)
T cd05632 82 MNGGDLKFHIYNMG-NPGFEEERALFYAAEILCGLEDLH---RENTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGE- 156 (285)
T ss_pred ccCccHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecCCCHHHEEECCCCCEEEecCCcceecCCCC-
Confidence 99999998886533 236899999999999999999999 7899999999999999999999999999997653322
Q ss_pred CccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHHHH
Q 011005 364 NRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVIRD 443 (496)
Q Consensus 364 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 443 (496)
......|+..|+|||.+.+..++.++|+||+|+++|+|++|+.||..... ...... ................
T Consensus 157 ~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~-------~~~~~~-~~~~~~~~~~~~~~~~ 228 (285)
T cd05632 157 SIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKE-------KVKREE-VDRRVLETEEVYSAKF 228 (285)
T ss_pred cccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCH-------HHHHHH-HHHhhhccccccCccC
Confidence 22334689999999999999999999999999999999999999963211 111111 1111110000000111
Q ss_pred HHHHHHHHHhcccCCCCCCCC-----HHHHHHHHHHhcc
Q 011005 444 ILLISTVSFACLQSNPKSRPT-----MQSVSQEFLITRK 477 (496)
Q Consensus 444 ~~~l~~li~~cl~~dP~~Rps-----~~evl~~~~~~~~ 477 (496)
...+.+++.+||+.||++||+ +.++++|.|+...
T Consensus 229 ~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~ 267 (285)
T cd05632 229 SEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRHPFFRNM 267 (285)
T ss_pred CHHHHHHHHHHccCCHhHcCCCcccChHHHHcChhhhcC
Confidence 224678999999999999999 8899999998664
No 159
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1e-39 Score=313.73 Aligned_cols=259 Identities=24% Similarity=0.373 Sum_probs=209.4
Q ss_pred hCCCCcceeeecCCeeEEEEEe-CCCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEe
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEY 283 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~ 283 (496)
.+|++.+.||.|++|.||+|.. .+++.|++|.+...... ..+.+.+|+.+++.++|+|++++++++...+..++|+||
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~-~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 97 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQP-KKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEY 97 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCc-hHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEe
Confidence 4688899999999999999965 57899999988654322 235678999999999999999999999999999999999
Q ss_pred cCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCC
Q 011005 284 MERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSS 363 (496)
Q Consensus 284 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 363 (496)
+++++|..++... .+++.++..++.|++.|++||| +.+++||||+|+||+++.++.++|+|||++........
T Consensus 98 ~~~~~L~~~~~~~----~l~~~~~~~i~~~l~~al~~LH---~~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~ 170 (296)
T cd06655 98 LAGGSLTDVVTET----CMDEAQIAAVCRECLQALEFLH---ANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQS 170 (296)
T ss_pred cCCCcHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEccCccchhcccccc
Confidence 9999999988643 5789999999999999999999 78999999999999999999999999999886654433
Q ss_pred CccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHHHH
Q 011005 364 NRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVIRD 443 (496)
Q Consensus 364 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 443 (496)
......+++.|+|||.+.+..++.++||||||+++|++++|+.||..... ............+ ... .....
T Consensus 171 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~-------~~~~~~~~~~~~~-~~~-~~~~~ 241 (296)
T cd06655 171 KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENP-------LRALYLIATNGTP-ELQ-NPEKL 241 (296)
T ss_pred cCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-------HHHHHHHHhcCCc-ccC-CcccC
Confidence 33345688899999999998899999999999999999999999864221 1111111111111 000 01112
Q ss_pred HHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCCC
Q 011005 444 ILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTPL 480 (496)
Q Consensus 444 ~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~~ 480 (496)
...+.+++.+||..||++|||+.++++|+|+....+.
T Consensus 242 ~~~~~~li~~~l~~dp~~Rpt~~~il~~~~~~~~~~~ 278 (296)
T cd06655 242 SPIFRDFLNRCLEMDVEKRGSAKELLQHPFLKLAKPL 278 (296)
T ss_pred CHHHHHHHHHHhhcChhhCCCHHHHhhChHhhhcccc
Confidence 2347789999999999999999999999999876553
No 160
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=1.7e-39 Score=305.58 Aligned_cols=251 Identities=23% Similarity=0.383 Sum_probs=203.9
Q ss_pred CCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEec
Q 011005 206 DFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEYM 284 (496)
Q Consensus 206 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~~ 284 (496)
+|++.+.||+|+||.||++..+ +++.+|+|.+.........+.+.+|+.+++.++|+||+++++.+..++..++||||+
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYC 80 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeC
Confidence 4788899999999999999765 688999999865443444567889999999999999999999999999999999999
Q ss_pred CCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCCC
Q 011005 285 ERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSN 364 (496)
Q Consensus 285 ~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 364 (496)
++|+|.+.+.... ...++...++.++.|++.||.||| +.+++|+||||+||++++++.++++|||.+.........
T Consensus 81 ~~~~l~~~~~~~~-~~~~~~~~~~~~~~~i~~al~~lH---~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~ 156 (255)
T cd08219 81 DGGDLMQKIKLQR-GKLFPEDTILQWFVQMCLGVQHIH---EKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGAY 156 (255)
T ss_pred CCCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHh---hCCcccCCCCcceEEECCCCcEEEcccCcceeecccccc
Confidence 9999998886532 235788999999999999999999 789999999999999999999999999999876544333
Q ss_pred ccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHHHHH
Q 011005 365 RTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVIRDI 444 (496)
Q Consensus 365 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (496)
.....+++.|+|||++.+..++.++|+||+|+++|+|++|+.||.... ..............+. .. ...
T Consensus 157 ~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~-------~~~~~~~~~~~~~~~~-~~---~~~ 225 (255)
T cd08219 157 ACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANS-------WKNLILKVCQGSYKPL-PS---HYS 225 (255)
T ss_pred cccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCC-------HHHHHHHHhcCCCCCC-Cc---ccC
Confidence 344568899999999999899999999999999999999999986321 1111222222222111 11 112
Q ss_pred HHHHHHHHhcccCCCCCCCCHHHHHHH
Q 011005 445 LLISTVSFACLQSNPKSRPTMQSVSQE 471 (496)
Q Consensus 445 ~~l~~li~~cl~~dP~~Rps~~evl~~ 471 (496)
..+.+++.+||+.||++|||+.+++..
T Consensus 226 ~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 226 YELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred HHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 246789999999999999999999865
No 161
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=1.3e-39 Score=308.34 Aligned_cols=259 Identities=28% Similarity=0.448 Sum_probs=208.5
Q ss_pred hCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEe
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEY 283 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~ 283 (496)
++|++.+.||.|+||+||+|... ++..+++|.+.........+.+.+|+++++.++|+|++++++.+..++..++|+|+
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~ 80 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPY 80 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEec
Confidence 46889999999999999999754 67889999987654333557789999999999999999999999999999999999
Q ss_pred cCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCC
Q 011005 284 MERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSS 363 (496)
Q Consensus 284 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 363 (496)
+++++|.+++........+++..+..++.|++.|+.||| +.+++||||+|+||++++++.++|+|||++..+.....
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh---~~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~ 157 (267)
T cd06610 81 LSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLH---SNGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGD 157 (267)
T ss_pred cCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHhEEEcCCCCEEEcccchHHHhccCcc
Confidence 999999999976543346899999999999999999999 78999999999999999999999999999987654332
Q ss_pred C----ccccccccccccccccccC-CcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCCh
Q 011005 364 N----RTLLAGTYGYIAPELAYTM-VMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDR 438 (496)
Q Consensus 364 ~----~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (496)
. .....++..|+|||++... .++.++|+||||+++|+|++|+.||...... .......... +.....
T Consensus 158 ~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~-------~~~~~~~~~~-~~~~~~ 229 (267)
T cd06610 158 RTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPM-------KVLMLTLQND-PPSLET 229 (267)
T ss_pred ccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChh-------hhHHHHhcCC-CCCcCC
Confidence 2 1334688899999998877 7889999999999999999999998643221 1111111111 111111
Q ss_pred hH--HHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHH
Q 011005 439 KV--IRDILLISTVSFACLQSNPKSRPTMQSVSQEFLI 474 (496)
Q Consensus 439 ~~--~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~ 474 (496)
.. ......+.+++.+||+.||++|||+.++++|+|+
T Consensus 230 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~p~~ 267 (267)
T cd06610 230 GADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKHKFF 267 (267)
T ss_pred ccccccccHHHHHHHHHHcCCChhhCcCHHHHhhCCCC
Confidence 00 1122357799999999999999999999999885
No 162
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=1.4e-39 Score=316.26 Aligned_cols=258 Identities=23% Similarity=0.348 Sum_probs=188.7
Q ss_pred cceeeecCCeeEEEEEeC---CCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeec--CCeEEEEEEec
Q 011005 210 RYCIGTGGYGSVYKAQLP---NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLH--KKCMFLIYEYM 284 (496)
Q Consensus 210 ~~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~--~~~~~lV~e~~ 284 (496)
..+||+|+||+||+|..+ +++.||+|.+..... ...+.+|+.++++++||||+++++++.. +...++||||+
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~---~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~ 82 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGI---SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYA 82 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCC---cHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEecc
Confidence 457999999999999764 467899999865432 2446789999999999999999998854 45689999998
Q ss_pred CCCChhhhhhCCC------CCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEe----cCCCCeEEccccc
Q 011005 285 ERGSLFCNLHNNE------DAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILL----NSKLEAFVADFGT 354 (496)
Q Consensus 285 ~~g~L~~~l~~~~------~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~----~~~~~~kl~Dfg~ 354 (496)
. ++|.+++.... ....++...+..++.||+.||+||| +.+|+||||||+|||+ +.++.+||+|||+
T Consensus 83 ~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH---~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~ 158 (317)
T cd07868 83 E-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLH---ANWVLHRDLKPANILVMGEGPERGRVKIADMGF 158 (317)
T ss_pred C-CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHH---hCCEEcCCCCHHHEEEecCCCCcCcEEEeecCc
Confidence 6 47877765321 1235889999999999999999999 7899999999999999 4567899999999
Q ss_pred cccccCCCC---CccccccccccccccccccC-CcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCC--cchhHhhh
Q 011005 355 ARLLHADSS---NRTLLAGTYGYIAPELAYTM-VMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDP--KIMLIDVL 428 (496)
Q Consensus 355 ~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~--~~~~~~~~ 428 (496)
++....... ......+|+.|+|||++.+. .++.++||||+||++|+|++|+.||...........+ ........
T Consensus 159 a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~ 238 (317)
T cd07868 159 ARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIF 238 (317)
T ss_pred eeccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCcccccccccccHHHHHHHH
Confidence 987643321 22345789999999998774 5889999999999999999999999633211000000 00000000
Q ss_pred cC-------------CCCC----------------CCChh----HHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHH
Q 011005 429 DQ-------------RLPP----------------PVDRK----VIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLI 474 (496)
Q Consensus 429 ~~-------------~~~~----------------~~~~~----~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~ 474 (496)
.. ..+. ..... .......+.+++.+||+.||++|||++|+++|+|+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~hp~f 317 (317)
T cd07868 239 NVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYF 317 (317)
T ss_pred HhcCCCChHHhHHHhhccchhhhhhhhhccccCcccccchHHhcCCCCChHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 00 0000 00000 00001236789999999999999999999999985
No 163
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=5.4e-40 Score=320.85 Aligned_cols=260 Identities=26% Similarity=0.326 Sum_probs=200.9
Q ss_pred hCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccch--hHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEE
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIY 281 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~ 281 (496)
++|++.+.||+|+||+||++..+ +++.+|+|.+.... .......+.+|+.++..++|++|+++++++...+..++||
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM 80 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence 46889999999999999999765 57789999986532 2223345788999999999999999999999999999999
Q ss_pred EecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCC
Q 011005 282 EYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHAD 361 (496)
Q Consensus 282 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 361 (496)
||+++|+|.+++..... .+++..+..++.||+.||.||| +.+|+||||||+||+++.++.++|+|||++......
T Consensus 81 ey~~~g~L~~~l~~~~~--~l~~~~~~~~~~qi~~al~~lH---~~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~ 155 (332)
T cd05623 81 DYYVGGDLLTLLSKFED--RLPEDMARFYLAEMVIAIDSVH---QLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMED 155 (332)
T ss_pred eccCCCcHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHEEECCCCCEEEeecchheecccC
Confidence 99999999999976322 5788999999999999999999 789999999999999999999999999999765433
Q ss_pred CCC-ccccccccccccccccc-----cCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCC
Q 011005 362 SSN-RTLLAGTYGYIAPELAY-----TMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPP 435 (496)
Q Consensus 362 ~~~-~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (496)
... ....+||+.|+|||++. ...++.++|||||||++|||++|+.||.... .......+........
T Consensus 156 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~-------~~~~~~~i~~~~~~~~ 228 (332)
T cd05623 156 GTVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAES-------LVETYGKIMNHKERFQ 228 (332)
T ss_pred CcceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCC-------HHHHHHHHhCCCcccc
Confidence 222 23357999999999986 3467889999999999999999999996322 1112222222111111
Q ss_pred CChhHHHHHHHHHHHHHhcccCCCCC--CCCHHHHHHHHHHhc
Q 011005 436 VDRKVIRDILLISTVSFACLQSNPKS--RPTMQSVSQEFLITR 476 (496)
Q Consensus 436 ~~~~~~~~~~~l~~li~~cl~~dP~~--Rps~~evl~~~~~~~ 476 (496)
...........+.+++.+|+..+|.+ |++++|+++|+|+..
T Consensus 229 ~p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h~~f~~ 271 (332)
T cd05623 229 FPAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQHPFFTG 271 (332)
T ss_pred CCCccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCCCCcCC
Confidence 11111111234667888888654444 789999999999864
No 164
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=8.1e-40 Score=322.88 Aligned_cols=265 Identities=23% Similarity=0.249 Sum_probs=200.6
Q ss_pred HHhCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccch-hHHHHHHHHHHHHHHHhhcccccccccceeecC------
Q 011005 203 ATEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSE-ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHK------ 274 (496)
Q Consensus 203 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~------ 274 (496)
..++|++.+.||+|+||.||+|... .++.||+|++.... .......+.+|+.+++.++||||+++++++...
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 94 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEF 94 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeecccccccc
Confidence 4578999999999999999999654 68899999987542 233346678899999999999999999988643
Q ss_pred CeEEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccc
Q 011005 275 KCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGT 354 (496)
Q Consensus 275 ~~~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~ 354 (496)
...++||||+++ ++.+.+.. .+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||+
T Consensus 95 ~~~~lv~e~~~~-~l~~~~~~-----~l~~~~~~~~~~qi~~aL~~LH---~~givHrDikp~Nill~~~~~~kl~Dfg~ 165 (355)
T cd07874 95 QDVYLVMELMDA-NLCQVIQM-----ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGL 165 (355)
T ss_pred ceeEEEhhhhcc-cHHHHHhh-----cCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChHHEEECCCCCEEEeeCcc
Confidence 357999999975 66666643 4788889999999999999999 78999999999999999999999999999
Q ss_pred cccccCCCCCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCC---------CCCCc----
Q 011005 355 ARLLHADSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSS---------SSDPK---- 421 (496)
Q Consensus 355 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~---------~~~~~---- 421 (496)
++..... .......+|+.|+|||++.+..++.++||||+||++|+|++|+.||........ ...+.
T Consensus 166 ~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (355)
T cd07874 166 ARTAGTS-FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 244 (355)
T ss_pred cccCCCc-cccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHh
Confidence 9765332 222345789999999999999999999999999999999999999963221000 00000
Q ss_pred --chhHhhhcCCC---------------CCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhcc
Q 011005 422 --IMLIDVLDQRL---------------PPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRK 477 (496)
Q Consensus 422 --~~~~~~~~~~~---------------~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~ 477 (496)
........... .+............+.+++.+||+.||++|||+.|+++|+|+...
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~hp~~~~~ 317 (355)
T cd07874 245 LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQHPYINVW 317 (355)
T ss_pred hcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcCcchhcc
Confidence 00000000000 000000001112346799999999999999999999999999643
No 165
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=2.6e-40 Score=323.09 Aligned_cols=247 Identities=23% Similarity=0.322 Sum_probs=194.8
Q ss_pred eeecCCeeEEEEEeC-CCcEEEEEEcccchh--HHHHHHHHHHHHHHHhh---cccccccccceeecCCeEEEEEEecCC
Q 011005 213 IGTGGYGSVYKAQLP-NGKVFALKKLHTSEE--LAFIKSFKNEAQVLSQV---LHRNIVKLYGYCLHKKCMFLIYEYMER 286 (496)
Q Consensus 213 lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l---~h~niv~~~~~~~~~~~~~lV~e~~~~ 286 (496)
||+|+||+||+|..+ +++.||+|.+..... .........|..++.+. .||||+++++++......++||||+++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 699999999999764 689999999865431 12233455677777665 699999999999999999999999999
Q ss_pred CChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCCCcc
Q 011005 287 GSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRT 366 (496)
Q Consensus 287 g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 366 (496)
|+|..++.... .+++..+..++.||+.||+||| +.+|+||||||+|||++.++.++|+|||++...........
T Consensus 81 g~L~~~l~~~~---~~~~~~~~~~~~qil~al~~LH---~~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~ 154 (330)
T cd05586 81 GELFWHLQKEG---RFSEDRAKFYIAELVLALEHLH---KYDIVYRDLKPENILLDATGHIALCDFGLSKANLTDNKTTN 154 (330)
T ss_pred ChHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCCCcc
Confidence 99998887543 6899999999999999999999 78999999999999999999999999999976443333344
Q ss_pred ccccccccccccccccC-CcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHHHHHH
Q 011005 367 LLAGTYGYIAPELAYTM-VMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVIRDIL 445 (496)
Q Consensus 367 ~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (496)
..+||+.|+|||++.+. .++.++||||+||++|+|++|+.||.... .......+.......+... ...
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~-------~~~~~~~i~~~~~~~~~~~----~~~ 223 (330)
T cd05586 155 TFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAED-------TQQMYRNIAFGKVRFPKNV----LSD 223 (330)
T ss_pred CccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCC-------HHHHHHHHHcCCCCCCCcc----CCH
Confidence 56799999999998765 47899999999999999999999986321 1112222222222111110 122
Q ss_pred HHHHHHHhcccCCCCCCC----CHHHHHHHHHHhc
Q 011005 446 LISTVSFACLQSNPKSRP----TMQSVSQEFLITR 476 (496)
Q Consensus 446 ~l~~li~~cl~~dP~~Rp----s~~evl~~~~~~~ 476 (496)
.+.+++.+||+.||.+|| ++.++++|+|+..
T Consensus 224 ~~~~li~~~L~~~P~~R~~~~~~~~~ll~h~~~~~ 258 (330)
T cd05586 224 EGRQFVKGLLNRNPQHRLGAHRDAVELKEHPFFAD 258 (330)
T ss_pred HHHHHHHHHcCCCHHHCCCCCCCHHHHhcCccccC
Confidence 466899999999999998 7999999999864
No 166
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=5.1e-40 Score=320.80 Aligned_cols=260 Identities=22% Similarity=0.312 Sum_probs=202.6
Q ss_pred hCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccch--hHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEE
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIY 281 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~ 281 (496)
++|.+.+.||+|+||+||++..+ +++.||+|.+.... .......+.+|..++..++|++|+++++++...+..++||
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~ 80 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM 80 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 47899999999999999999765 67889999987532 2233455788999999999999999999999999999999
Q ss_pred EecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCC
Q 011005 282 EYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHAD 361 (496)
Q Consensus 282 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 361 (496)
||++||+|.+++.... ..+++..+..++.|++.||.||| +++|+||||||+||+++.++.+||+|||++......
T Consensus 81 Ey~~gg~L~~~l~~~~--~~l~~~~~~~~~~qi~~~L~~lH---~~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~ 155 (331)
T cd05624 81 DYYVGGDLLTLLSKFE--DRLPEDMARFYIAEMVLAIHSIH---QLHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQD 155 (331)
T ss_pred eCCCCCcHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCchHHEEEcCCCCEEEEeccceeeccCC
Confidence 9999999999997632 26788999999999999999999 789999999999999999999999999999876543
Q ss_pred CCC-cccccccccccccccccc-----CCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCC
Q 011005 362 SSN-RTLLAGTYGYIAPELAYT-----MVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPP 435 (496)
Q Consensus 362 ~~~-~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (496)
... .....||+.|+|||++.+ ..++.++||||+|+++|+|++|+.||.... .......+.......+
T Consensus 156 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~-------~~~~~~~i~~~~~~~~ 228 (331)
T cd05624 156 GTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAES-------LVETYGKIMNHEERFQ 228 (331)
T ss_pred CceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCC-------HHHHHHHHHcCCCccc
Confidence 322 233568999999999876 467889999999999999999999996321 1112222222111111
Q ss_pred CChhHHHHHHHHHHHHHhcccCCCCC--CCCHHHHHHHHHHhc
Q 011005 436 VDRKVIRDILLISTVSFACLQSNPKS--RPTMQSVSQEFLITR 476 (496)
Q Consensus 436 ~~~~~~~~~~~l~~li~~cl~~dP~~--Rps~~evl~~~~~~~ 476 (496)
...........+.+++.+|+..++++ |++++++++|+|+..
T Consensus 229 ~p~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h~~f~~ 271 (331)
T cd05624 229 FPSHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKHAFFEG 271 (331)
T ss_pred CCCccccCCHHHHHHHHHHccCchhhcCCCCHHHHhcCCCcCC
Confidence 11111111234678888999876554 568999999998754
No 167
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=3.4e-39 Score=304.65 Aligned_cols=253 Identities=25% Similarity=0.429 Sum_probs=203.6
Q ss_pred HhCCCCcceeeecCCeeEEEEEeCCCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEe
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEY 283 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~ 283 (496)
.++|++.+.||+|++|.||+|...+++.||+|.++.... ..+.+.+|+.++++++|+||+++++++...+..++||||
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 82 (261)
T cd05068 5 RTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGTM--DPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTEL 82 (261)
T ss_pred hhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCcc--cHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeec
Confidence 467899999999999999999887888999999876432 235688999999999999999999999999999999999
Q ss_pred cCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCC
Q 011005 284 MERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSS 363 (496)
Q Consensus 284 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 363 (496)
+++++|.+++.... ...+++..+..++.|++.|+.||| +.+++||||||+||++++++.++|+|||++........
T Consensus 83 ~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~ 158 (261)
T cd05068 83 MKYGSLLEYLQGGA-GRALKLPQLIDMAAQVASGMAYLE---AQNYIHRDLAARNVLVGENNICKVADFGLARVIKEDIY 158 (261)
T ss_pred ccCCcHHHHHhccC-CCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeccCCcceEEEcCCCCEEECCcceEEEccCCcc
Confidence 99999999987644 336899999999999999999999 78999999999999999999999999999987653221
Q ss_pred Cc-cccccccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHH
Q 011005 364 NR-TLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVI 441 (496)
Q Consensus 364 ~~-~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (496)
.. .....+..|+|||.+.+..++.++||||||+++|+|++ |+.||.... ...... .+......+...
T Consensus 159 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~-------~~~~~~-~~~~~~~~~~~~--- 227 (261)
T cd05068 159 EAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMT-------NAEVLQ-QVDQGYRMPCPP--- 227 (261)
T ss_pred cccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCC-------HHHHHH-HHHcCCCCCCCC---
Confidence 11 11123457999999999999999999999999999999 999986321 111111 112211111111
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCHHHHHHHHH
Q 011005 442 RDILLISTVSFACLQSNPKSRPTMQSVSQEFL 473 (496)
Q Consensus 442 ~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~ 473 (496)
.....+.+++.+|++.+|++||++.++++.+.
T Consensus 228 ~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~ 259 (261)
T cd05068 228 GCPKELYDIMLDCWKEDPDDRPTFETLQWKLE 259 (261)
T ss_pred cCCHHHHHHHHHHhhcCcccCCCHHHHHHHHh
Confidence 12235788999999999999999999998764
No 168
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=3.2e-39 Score=309.31 Aligned_cols=269 Identities=24% Similarity=0.340 Sum_probs=207.3
Q ss_pred HHhCCCCcceeeecCCeeEEEEEeC------CCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCe
Q 011005 203 ATEDFDIRYCIGTGGYGSVYKAQLP------NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKC 276 (496)
Q Consensus 203 ~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 276 (496)
..++|++.+.||+|+||.||+|..+ .+..||+|.+...........+.+|+.++++++|+||+++++++..+..
T Consensus 4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 83 (288)
T cd05061 4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQP 83 (288)
T ss_pred cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence 4578999999999999999999643 2458999998765443444567889999999999999999999999999
Q ss_pred EEEEEEecCCCChhhhhhCCCC-------CccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEE
Q 011005 277 MFLIYEYMERGSLFCNLHNNED-------AVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFV 349 (496)
Q Consensus 277 ~~lV~e~~~~g~L~~~l~~~~~-------~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl 349 (496)
.++||||+++|+|.+++..... ....++..+..++.|++.||.||| +++++||||||+||++++++.++|
T Consensus 84 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~i~H~dikp~nili~~~~~~~L 160 (288)
T cd05061 84 TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKI 160 (288)
T ss_pred cEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCCcCCCCChheEEEcCCCcEEE
Confidence 9999999999999999975321 124567788899999999999999 789999999999999999999999
Q ss_pred ccccccccccCCCCC--ccccccccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccCCCCCCcchhHh
Q 011005 350 ADFGTARLLHADSSN--RTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSSDPKIMLID 426 (496)
Q Consensus 350 ~Dfg~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~ 426 (496)
+|||+++........ .....++..|+|||.+.+..++.++||||||+++|||++ |..||.... .......
T Consensus 161 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~-------~~~~~~~ 233 (288)
T cd05061 161 GDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLS-------NEQVLKF 233 (288)
T ss_pred CcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCC-------HHHHHHH
Confidence 999999765432221 112234678999999999999999999999999999998 788885321 1111111
Q ss_pred hhcCCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCCCCCcccccccch
Q 011005 427 VLDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTPLVKHAAIQDISI 491 (496)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~~~~~~~~~~i~~ 491 (496)
........... .....+.+++.+||+.||++|||+.++++.+... -++.+.+|+|
T Consensus 234 ~~~~~~~~~~~----~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~------~~~~~~~~~~ 288 (288)
T cd05061 234 VMDGGYLDQPD----NCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD------LHPSFPEVSF 288 (288)
T ss_pred HHcCCCCCCCC----CCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhh------cCCCCCCCCC
Confidence 11111111111 1123578999999999999999999999887553 2445555554
No 169
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=6.8e-40 Score=313.72 Aligned_cols=266 Identities=26% Similarity=0.411 Sum_probs=205.3
Q ss_pred ccHHHHHHHHhCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchhHHHHHHHHHHHHHHHhh-cccccccccceee
Q 011005 195 IVYEDLIEATEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFKNEAQVLSQV-LHRNIVKLYGYCL 272 (496)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~ 272 (496)
+.++.+..+.++|++.+.||+|+||.||+|..+ +++.+|+|.+...... ...+.+|+.+++.+ +|+||+++++++.
T Consensus 8 ~~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~--~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 85 (286)
T cd06638 8 IIFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDI--DEEIEAEYNILKALSDHPNVVKFYGMYY 85 (286)
T ss_pred EEeecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccccch--HHHHHHHHHHHHHHhcCCCeeeeeeeee
Confidence 334556667889999999999999999999664 6789999987653322 25577899999999 6999999999874
Q ss_pred -----cCCeEEEEEEecCCCChhhhhhCC-CCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCC
Q 011005 273 -----HKKCMFLIYEYMERGSLFCNLHNN-EDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLE 346 (496)
Q Consensus 273 -----~~~~~~lV~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~ 346 (496)
.++..++||||+++++|.+++... .....+++..+..++.|++.||.||| +.+++||||||+||+++.++.
T Consensus 86 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~nili~~~~~ 162 (286)
T cd06638 86 KKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLH---VNKTIHRDVKGNNILLTTEGG 162 (286)
T ss_pred ecccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHH---hCCccccCCCHHhEEECCCCC
Confidence 345789999999999999887642 22336788999999999999999999 789999999999999999999
Q ss_pred eEEccccccccccCCCCCcccccccccccccccccc-----CCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCc
Q 011005 347 AFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYT-----MVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPK 421 (496)
Q Consensus 347 ~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~ 421 (496)
++|+|||++..............|++.|+|||++.. ..++.++||||+|+++|+|++|+.||......
T Consensus 163 ~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~------- 235 (286)
T cd06638 163 VKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPM------- 235 (286)
T ss_pred EEEccCCceeecccCCCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchh-------
Confidence 999999999876543333344568999999998753 45788999999999999999999998643211
Q ss_pred chhHhhhcCCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHH
Q 011005 422 IMLIDVLDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLI 474 (496)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~ 474 (496)
...... .......... .......+.+++.+||+.||++|||+.|+++|+|+
T Consensus 236 ~~~~~~-~~~~~~~~~~-~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~~~ 286 (286)
T cd06638 236 RALFKI-PRNPPPTLHQ-PELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHVFI 286 (286)
T ss_pred HHHhhc-cccCCCcccC-CCCcCHHHHHHHHHHccCCcccCCCHHHHhhcccC
Confidence 111111 1111111000 00112247789999999999999999999999885
No 170
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=2.3e-39 Score=304.95 Aligned_cols=254 Identities=27% Similarity=0.400 Sum_probs=204.8
Q ss_pred CCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccch-hHHHHHHHHHHHHHHHhhcccccccccceeec-CCeEEEEEE
Q 011005 206 DFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSE-ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLH-KKCMFLIYE 282 (496)
Q Consensus 206 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-~~~~~lV~e 282 (496)
+|++.+.||+|++|.||++..+ +++.||+|.+.... .....+.+.+|++++++++|+|++++++.+.. ....++|||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e 80 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG 80 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence 4888999999999999999764 57889999986543 22344568899999999999999999998764 446899999
Q ss_pred ecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCC
Q 011005 283 YMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADS 362 (496)
Q Consensus 283 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 362 (496)
|+++++|.+++.... ...+++.++..++.|++.|+++|| +.+++||||+|+||+++.++.++|+|||++.......
T Consensus 81 ~~~~~~l~~~l~~~~-~~~l~~~~~~~~~~~l~~~l~~lH---~~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~ 156 (257)
T cd08223 81 FCEGGDLYHKLKEQK-GKLLPENQVVEWFVQIAMALQYLH---EKHILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQC 156 (257)
T ss_pred ccCCCcHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCchhEEEecCCcEEEecccceEEecccC
Confidence 999999999987642 235899999999999999999999 7899999999999999999999999999998765443
Q ss_pred CCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHHH
Q 011005 363 SNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVIR 442 (496)
Q Consensus 363 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (496)
.......+++.|+|||++.+..++.++||||+|+++|++++|+.||.... .............+... ..
T Consensus 157 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~-------~~~~~~~~~~~~~~~~~----~~ 225 (257)
T cd08223 157 DMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKD-------MNSLVYRIIEGKLPPMP----KD 225 (257)
T ss_pred CccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCC-------HHHHHHHHHhcCCCCCc----cc
Confidence 33444568899999999999999999999999999999999999986221 11122222222222211 11
Q ss_pred HHHHHHHHHHhcccCCCCCCCCHHHHHHHHHH
Q 011005 443 DILLISTVSFACLQSNPKSRPTMQSVSQEFLI 474 (496)
Q Consensus 443 ~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~ 474 (496)
....+.+++.+|++.||++|||+.++++|+|+
T Consensus 226 ~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~~ 257 (257)
T cd08223 226 YSPELGELIATMLSKRPEKRPSVKSILRQPYI 257 (257)
T ss_pred cCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 22357799999999999999999999999874
No 171
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=2.6e-39 Score=304.52 Aligned_cols=253 Identities=23% Similarity=0.360 Sum_probs=207.3
Q ss_pred CCCCcceeeecCCeeEEEEEe-CCCcEEEEEEcccch-hHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEe
Q 011005 206 DFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSE-ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEY 283 (496)
Q Consensus 206 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~ 283 (496)
+|+..+.||+|+||.||.+.. .+++.+++|.+.... +....+.+.+|+.++++++|+||+++++++.+.+..++||||
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~ 80 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEY 80 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEe
Confidence 478899999999999999964 468899999886543 234456788999999999999999999999999999999999
Q ss_pred cCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCC
Q 011005 284 MERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSS 363 (496)
Q Consensus 284 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 363 (496)
+++++|.+++.... ...+++..+..++.|++.|+.||| +.+++|+||+|+||++++++.+||+|||.+........
T Consensus 81 ~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~ 156 (256)
T cd08221 81 ANGGTLYDKIVRQK-GQLFEEEMVLWYLFQIVSAVSYIH---KAGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYS 156 (256)
T ss_pred cCCCcHHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHH---hCCccccCCChHhEEEeCCCCEEECcCcceEEcccccc
Confidence 99999999997653 336899999999999999999999 77999999999999999999999999999987654443
Q ss_pred CccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHHHH
Q 011005 364 NRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVIRD 443 (496)
Q Consensus 364 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 443 (496)
......+++.|+|||.+.+..++.++||||+|+++|+|++|..||... .................. ...
T Consensus 157 ~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~-------~~~~~~~~~~~~~~~~~~----~~~ 225 (256)
T cd08221 157 MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDAT-------NPLNLVVKIVQGNYTPVV----SVY 225 (256)
T ss_pred cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCC-------CHHHHHHHHHcCCCCCCc----ccc
Confidence 334456899999999999888999999999999999999999998632 112222222222222211 111
Q ss_pred HHHHHHHHHhcccCCCCCCCCHHHHHHHHH
Q 011005 444 ILLISTVSFACLQSNPKSRPTMQSVSQEFL 473 (496)
Q Consensus 444 ~~~l~~li~~cl~~dP~~Rps~~evl~~~~ 473 (496)
...+.+++.+||+.+|++||++.++++++|
T Consensus 226 ~~~~~~~i~~~l~~~p~~R~s~~~ll~~~~ 255 (256)
T cd08221 226 SSELISLVHSLLQQDPEKRPTADEVLDQPL 255 (256)
T ss_pred CHHHHHHHHHHcccCcccCCCHHHHhhCcC
Confidence 234778999999999999999999999876
No 172
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=1.4e-39 Score=310.93 Aligned_cols=258 Identities=26% Similarity=0.355 Sum_probs=204.4
Q ss_pred CCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEecC
Q 011005 207 FDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEYME 285 (496)
Q Consensus 207 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~~~ 285 (496)
|++.+.||+|+||.||+|... ++..+++|.+..... ...+.+.+|+++++.++|+|++++++++..++..++|+||++
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~ 85 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSE-EELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCA 85 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCH-HHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecC
Confidence 677888999999999999765 477888888865432 334678899999999999999999999999999999999999
Q ss_pred CCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCCCc
Q 011005 286 RGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNR 365 (496)
Q Consensus 286 ~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 365 (496)
+++|...+.... ..+++..+..++.|++.||.||| +.+++||||||+||+++.++.++++|||++..........
T Consensus 86 ~~~l~~~~~~~~--~~l~~~~~~~~~~qi~~~L~~LH---~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~ 160 (282)
T cd06643 86 GGAVDAVMLELE--RPLTEPQIRVVCKQTLEALNYLH---ENKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRR 160 (282)
T ss_pred CCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCcccEEEccCCCEEEcccccccccccccccc
Confidence 999988876532 26899999999999999999999 7899999999999999999999999999997654333333
Q ss_pred cccccccccccccccc-----cCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhH
Q 011005 366 TLLAGTYGYIAPELAY-----TMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKV 440 (496)
Q Consensus 366 ~~~~gt~~y~aPE~~~-----~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 440 (496)
....+++.|+|||++. +..++.++||||+||++|+|++|+.||..... ............+.... .
T Consensus 161 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~-------~~~~~~~~~~~~~~~~~--~ 231 (282)
T cd06643 161 DSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNP-------MRVLLKIAKSEPPTLAQ--P 231 (282)
T ss_pred ccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCH-------HHHHHHHhhcCCCCCCC--c
Confidence 4456889999999874 44577899999999999999999999863321 11111221111111000 1
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCC
Q 011005 441 IRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTP 479 (496)
Q Consensus 441 ~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~ 479 (496)
......+.+++.+||+.||++||++.++++|+|+.....
T Consensus 232 ~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~ 270 (282)
T cd06643 232 SRWSSEFKDFLKKCLEKNVDARWTTTQLLQHPFVTVNSN 270 (282)
T ss_pred cccCHHHHHHHHHHccCChhhCcCHHHHhcCCCEeccCC
Confidence 112235789999999999999999999999999876544
No 173
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=9.7e-40 Score=328.35 Aligned_cols=260 Identities=21% Similarity=0.260 Sum_probs=198.4
Q ss_pred HhCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEE
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYE 282 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e 282 (496)
..+|.+.+.||+|+||.||+|.++ .++.||||.... ..+.+|++++++++|+||+++++++..++..++|||
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~-------~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e 240 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY-------ASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLP 240 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc-------cCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEE
Confidence 457999999999999999999765 478899996432 335689999999999999999999999999999999
Q ss_pred ecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCC
Q 011005 283 YMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADS 362 (496)
Q Consensus 283 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 362 (496)
++. ++|..++.... ..+++..++.|+.|++.||.||| ..+|+||||||+|||++.++.++|+|||+++......
T Consensus 241 ~~~-~~L~~~l~~~~--~~l~~~~~~~i~~qi~~aL~yLH---~~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~ 314 (461)
T PHA03211 241 KYR-SDLYTYLGARL--RPLGLAQVTAVARQLLSAIDYIH---GEGIIHRDIKTENVLVNGPEDICLGDFGAACFARGSW 314 (461)
T ss_pred ccC-CCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHH---HCCEEECcCCHHHEEECCCCCEEEcccCCceeccccc
Confidence 995 68888876532 26899999999999999999999 7899999999999999999999999999998664322
Q ss_pred CC--ccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCC---------
Q 011005 363 SN--RTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQR--------- 431 (496)
Q Consensus 363 ~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~--------- 431 (496)
.. .....||+.|+|||++.+..++.++|||||||++|||++|..|+-..................+...
T Consensus 315 ~~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~ 394 (461)
T PHA03211 315 STPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQ 394 (461)
T ss_pred ccccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCC
Confidence 21 2235689999999999999999999999999999999998876422111000000001111111100
Q ss_pred ------------------CCCCCChhH---HHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhc
Q 011005 432 ------------------LPPPVDRKV---IRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITR 476 (496)
Q Consensus 432 ------------------~~~~~~~~~---~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~ 476 (496)
.+......+ ......+.+|+.+||+.||++|||+.|+++|+|+..
T Consensus 395 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~hp~f~~ 460 (461)
T PHA03211 395 HAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRLPLFQS 460 (461)
T ss_pred CcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhCcccCC
Confidence 000000000 011124678999999999999999999999999864
No 174
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=1.8e-39 Score=307.83 Aligned_cols=260 Identities=23% Similarity=0.364 Sum_probs=201.3
Q ss_pred HHHhCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEE
Q 011005 202 EATEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLI 280 (496)
Q Consensus 202 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV 280 (496)
.+++.+.....||+|+||.||+|.+. ++..|++|.+..... ...+.+.+|+.++++++|+||+++++++..++..++|
T Consensus 5 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 83 (268)
T cd06624 5 YEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDS-RYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIF 83 (268)
T ss_pred cccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCH-HHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEE
Confidence 34566666778999999999999754 678899998876543 2346788999999999999999999999999999999
Q ss_pred EEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecC-CCCeEEcccccccccc
Q 011005 281 YEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNS-KLEAFVADFGTARLLH 359 (496)
Q Consensus 281 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~-~~~~kl~Dfg~~~~~~ 359 (496)
+||+++++|.+.+.........+...+..++.|++.||+||| ..+++||||||+||+++. ++.++|+|||.+....
T Consensus 84 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~ 160 (268)
T cd06624 84 MEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLH---DNQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLA 160 (268)
T ss_pred EecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHH---HCCEeecCCCHHHEEEcCCCCeEEEecchhheecc
Confidence 999999999999876432222377888899999999999999 789999999999999976 6789999999997664
Q ss_pred CCCCCccccccccccccccccccCC--cCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCC
Q 011005 360 ADSSNRTLLAGTYGYIAPELAYTMV--MTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVD 437 (496)
Q Consensus 360 ~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (496)
..........+++.|+|||++.+.. ++.++||||+|+++|+|++|+.||...... .............+...
T Consensus 161 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~------~~~~~~~~~~~~~~~~~ 234 (268)
T cd06624 161 GINPCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEP------QAAMFKVGMFKIHPEIP 234 (268)
T ss_pred cCCCccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccCh------hhhHhhhhhhccCCCCC
Confidence 3333333346788999999986643 788999999999999999999998632210 00000000000111111
Q ss_pred hhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHH
Q 011005 438 RKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLI 474 (496)
Q Consensus 438 ~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~ 474 (496)
. .....+.+++.+||+.+|++|||+.|+++|+|+
T Consensus 235 ~---~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~ 268 (268)
T cd06624 235 E---SLSAEAKNFILRCFEPDPDKRASAHDLLQDPFL 268 (268)
T ss_pred c---ccCHHHHHHHHHHcCCCchhCCCHHHHHhCCCC
Confidence 1 112347789999999999999999999999884
No 175
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=2.2e-39 Score=304.94 Aligned_cols=250 Identities=25% Similarity=0.429 Sum_probs=199.5
Q ss_pred hCCCCcceeeecCCeeEEEEEeCCCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEec
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEYM 284 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~~ 284 (496)
.+|++.+.||+|+||.||+|.++++..+|+|.+...... ...+.+|++++++++|+||+++++++...+..++||||+
T Consensus 4 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (256)
T cd05059 4 SELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGAMS--EDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYM 81 (256)
T ss_pred HHcchhhhhccCCCceEEEeEecCCccEEEEEeccCCCC--HHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecC
Confidence 358889999999999999998888888999998654321 245788999999999999999999999999999999999
Q ss_pred CCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCCC
Q 011005 285 ERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSN 364 (496)
Q Consensus 285 ~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 364 (496)
++++|.+++..... .+++..++.++.|++.|++||| +.+++||||||+||+++.++.+||+|||+++........
T Consensus 82 ~~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~ 156 (256)
T cd05059 82 ANGCLLNYLRERKG--KLGTEWLLDMCSDVCEAMEYLE---SNGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYT 156 (256)
T ss_pred CCCCHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHH---HCCcccccccHhhEEECCCCcEEECCcccceeccccccc
Confidence 99999999876432 6899999999999999999999 789999999999999999999999999999765432211
Q ss_pred c-cccccccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHHH
Q 011005 365 R-TLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVIR 442 (496)
Q Consensus 365 ~-~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (496)
. ....++..|+|||.+.+..++.++||||||+++|++++ |+.||..... . ................ .
T Consensus 157 ~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~-------~-~~~~~~~~~~~~~~~~---~ 225 (256)
T cd05059 157 SSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSN-------S-EVVESVSAGYRLYRPK---L 225 (256)
T ss_pred ccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCH-------H-HHHHHHHcCCcCCCCC---C
Confidence 1 11123457999999999999999999999999999999 8999863221 1 1111111111111111 1
Q ss_pred HHHHHHHHHHhcccCCCCCCCCHHHHHHHH
Q 011005 443 DILLISTVSFACLQSNPKSRPTMQSVSQEF 472 (496)
Q Consensus 443 ~~~~l~~li~~cl~~dP~~Rps~~evl~~~ 472 (496)
....+.+++.+||..+|++|||+.|+++.+
T Consensus 226 ~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 226 APTEVYTIMYSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred CCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence 233578999999999999999999999875
No 176
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=8.9e-40 Score=313.24 Aligned_cols=263 Identities=25% Similarity=0.318 Sum_probs=194.4
Q ss_pred CCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchh-HHHHHHHHHHHHHHHhh---cccccccccceeec-----CC
Q 011005 206 DFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEE-LAFIKSFKNEAQVLSQV---LHRNIVKLYGYCLH-----KK 275 (496)
Q Consensus 206 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l---~h~niv~~~~~~~~-----~~ 275 (496)
+|++.+.||+|+||+||+|..+ +++.||+|.+..... ......+.+|+.+++++ +||||+++++++.. ..
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 4888999999999999999765 688999998875321 11123456777777766 69999999998864 34
Q ss_pred eEEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEcccccc
Q 011005 276 CMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTA 355 (496)
Q Consensus 276 ~~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~ 355 (496)
..++|||++.+ +|.+++..... ..+++..+..++.|++.||.||| +.+++||||||+||+++.++.+||+|||++
T Consensus 81 ~~~lv~e~~~~-~l~~~~~~~~~-~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dikp~Nili~~~~~~kl~dfg~~ 155 (288)
T cd07863 81 KVTLVFEHVDQ-DLRTYLDKVPP-PGLPAETIKDLMRQFLRGLDFLH---ANCIVHRDLKPENILVTSGGQVKLADFGLA 155 (288)
T ss_pred eEEEEEccccc-CHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEECccCcc
Confidence 57999999975 88888875432 35899999999999999999999 789999999999999999999999999999
Q ss_pred ccccCCCCCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCC---------CCCCcchhH-
Q 011005 356 RLLHADSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSS---------SSDPKIMLI- 425 (496)
Q Consensus 356 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~---------~~~~~~~~~- 425 (496)
....... ......+++.|+|||++.+..++.++||||+||++|+|++|++||........ .........
T Consensus 156 ~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (288)
T cd07863 156 RIYSCQM-ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRD 234 (288)
T ss_pred ccccCcc-cCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCccc
Confidence 8664322 22335678999999999999999999999999999999999999853211000 000000000
Q ss_pred -----hhhcCCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHH
Q 011005 426 -----DVLDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLI 474 (496)
Q Consensus 426 -----~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~ 474 (496)
.........+...........+.+++.+||+.||++|||+.|+++|+|+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~hp~f 288 (288)
T cd07863 235 VTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQHPFF 288 (288)
T ss_pred ccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 0000000000000001112346799999999999999999999999885
No 177
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=2.9e-39 Score=305.81 Aligned_cols=253 Identities=24% Similarity=0.371 Sum_probs=203.1
Q ss_pred CCCCcceeeecCCeeEEEEEeCCCcEEEEEEcccch-----hHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEE
Q 011005 206 DFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSE-----ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLI 280 (496)
Q Consensus 206 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-----~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV 280 (496)
+|++.+.||+|+||+||+|...+++.+|+|.+.... .......+.+|++++++++|+||+++++++.+.+..++|
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 80 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIF 80 (265)
T ss_pred CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEE
Confidence 478889999999999999988889999999886432 123345688999999999999999999999999999999
Q ss_pred EEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccC
Q 011005 281 YEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHA 360 (496)
Q Consensus 281 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 360 (496)
+||+++++|.+++.... .+++..+..++.|++.||+||| +.+++|+||+|+||+++.++.++|+|||++.....
T Consensus 81 ~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~ 154 (265)
T cd06631 81 MEFVPGGSISSILNRFG---PLPEPVFCKYTKQILDGVAYLH---NNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAW 154 (265)
T ss_pred EecCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---hCCcccCCcCHHhEEECCCCeEEeccchhhHhhhh
Confidence 99999999999997643 5788999999999999999999 77999999999999999999999999999976532
Q ss_pred CC------CCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcC-CCC
Q 011005 361 DS------SNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQ-RLP 433 (496)
Q Consensus 361 ~~------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~ 433 (496)
.. .......++..|+|||.+.+..++.++||||+|+++|++++|+.||..... .......... ...
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~-------~~~~~~~~~~~~~~ 227 (265)
T cd06631 155 VGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDR-------LAAMFYIGAHRGLM 227 (265)
T ss_pred ccccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCCh-------HHHHHHhhhccCCC
Confidence 11 112234578899999999999999999999999999999999999963221 1111111111 011
Q ss_pred CCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHH
Q 011005 434 PPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLI 474 (496)
Q Consensus 434 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~ 474 (496)
+.... .....+.+++.+||+.+|++||++.|+++|+|+
T Consensus 228 ~~~~~---~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~ 265 (265)
T cd06631 228 PRLPD---SFSAAAIDFVTSCLTRDQHERPSALQLLRHDFL 265 (265)
T ss_pred CCCCC---CCCHHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence 11111 112346789999999999999999999999874
No 178
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=1.1e-39 Score=311.18 Aligned_cols=259 Identities=27% Similarity=0.419 Sum_probs=208.0
Q ss_pred HhCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEE
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYE 282 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e 282 (496)
.++|++.+.||+|+||.||+|... +++.+|+|.+..... ...+.+.+|++++++++|+||+++++++..+...++|||
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESE-EELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIE 82 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCH-HHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEee
Confidence 457899999999999999999764 688999999875543 334678899999999999999999999999999999999
Q ss_pred ecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCC
Q 011005 283 YMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADS 362 (496)
Q Consensus 283 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 362 (496)
|+++++|.+++..... .+++..+..++.|++.||.||| +.+++|+||+|+||+++.++.++|+|||++.......
T Consensus 83 ~~~~~~L~~~~~~~~~--~l~~~~~~~~~~ql~~~l~~lh---~~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~ 157 (280)
T cd06611 83 FCDGGALDSIMLELER--GLTEPQIRYVCRQMLEALNFLH---SHKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTL 157 (280)
T ss_pred ccCCCcHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChhhEEECCCCCEEEccCccchhhcccc
Confidence 9999999999876432 5899999999999999999999 7799999999999999999999999999987664443
Q ss_pred CCccccccccccccccccc-----cCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCC
Q 011005 363 SNRTLLAGTYGYIAPELAY-----TMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVD 437 (496)
Q Consensus 363 ~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (496)
.......+++.|+|||.+. +..++.++||||+|+++|+|++|+.||..... ............+. ..
T Consensus 158 ~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~-------~~~~~~~~~~~~~~-~~ 229 (280)
T cd06611 158 QKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNP-------MRVLLKILKSEPPT-LD 229 (280)
T ss_pred cccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCH-------HHHHHHHhcCCCCC-cC
Confidence 3344456889999999875 34567799999999999999999999864321 11112221111111 00
Q ss_pred hhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhcc
Q 011005 438 RKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRK 477 (496)
Q Consensus 438 ~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~ 477 (496)
. .......+.+++.+||+.+|++||++.++++|+|+...
T Consensus 230 ~-~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~ 268 (280)
T cd06611 230 Q-PSKWSSSFNDFLKSCLVKDPDDRPTAAELLKHPFVSDQ 268 (280)
T ss_pred C-cccCCHHHHHHHHHHhccChhhCcCHHHHhcChhhccc
Confidence 0 11122346789999999999999999999999999766
No 179
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=3.2e-39 Score=307.53 Aligned_cols=255 Identities=25% Similarity=0.344 Sum_probs=203.3
Q ss_pred HhCCCCcceeeecCCeeEEEEEeCC------CcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeE
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLPN------GKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCM 277 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 277 (496)
.++|++.+.||+|+||.||+|..++ +..||+|.+...........+.+|+.+++.++|+||+++++++......
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~ 84 (277)
T cd05032 5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPT 84 (277)
T ss_pred hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCc
Confidence 4578899999999999999997642 4689999987665444456788999999999999999999999999999
Q ss_pred EEEEEecCCCChhhhhhCCCC-------CccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEc
Q 011005 278 FLIYEYMERGSLFCNLHNNED-------AVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVA 350 (496)
Q Consensus 278 ~lV~e~~~~g~L~~~l~~~~~-------~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~ 350 (496)
++||||+++|+|.+++..... ...+++..++.++.|++.||.||| ..+++||||||+||+++.++.++|+
T Consensus 85 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~di~p~nill~~~~~~kl~ 161 (277)
T cd05032 85 LVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLA---AKKFVHRDLAARNCMVAEDLTVKIG 161 (277)
T ss_pred EEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHH---hCCccccccChheEEEcCCCCEEEC
Confidence 999999999999999875322 224788899999999999999999 7899999999999999999999999
Q ss_pred cccccccccCCCC--CccccccccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccCCCCCCcchhHhh
Q 011005 351 DFGTARLLHADSS--NRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSSDPKIMLIDV 427 (496)
Q Consensus 351 Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~ 427 (496)
|||+++....... ......++..|+|||.+.+..++.++||||||+++||+++ |+.||.... ........
T Consensus 162 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~-------~~~~~~~~ 234 (277)
T cd05032 162 DFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLS-------NEEVLKFV 234 (277)
T ss_pred CcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCC-------HHHHHHHH
Confidence 9999976543321 1223346778999999998889999999999999999998 999985321 11111111
Q ss_pred hcCCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHH
Q 011005 428 LDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEF 472 (496)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~ 472 (496)
........... ....+.+++.+||+.+|++|||+.++++.+
T Consensus 235 ~~~~~~~~~~~----~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l 275 (277)
T cd05032 235 IDGGHLDLPEN----CPDKLLELMRMCWQYNPKMRPTFLEIVSSL 275 (277)
T ss_pred hcCCCCCCCCC----CCHHHHHHHHHHcCCChhhCCCHHHHHHHh
Confidence 11111111111 133578999999999999999999999875
No 180
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=1.8e-39 Score=310.11 Aligned_cols=263 Identities=25% Similarity=0.384 Sum_probs=205.6
Q ss_pred cHHHHHHHHhCCCCcceeeecCCeeEEEEEe-CCCcEEEEEEcccchhHHHHHHHHHHHHHHHhh-cccccccccceeec
Q 011005 196 VYEDLIEATEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSEELAFIKSFKNEAQVLSQV-LHRNIVKLYGYCLH 273 (496)
Q Consensus 196 ~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~ 273 (496)
+..++....+.|++.+.||+|+||.||+|.. .+++.+|+|.+..... ....+..|+.+++++ +|+||+++++++..
T Consensus 7 ~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~~--~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 84 (282)
T cd06636 7 DLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTED--EEEEIKLEINMLKKYSHHRNIATYYGAFIK 84 (282)
T ss_pred hhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecChH--HHHHHHHHHHHHHHhcCCCcEEEEeeehhc
Confidence 3445555778999999999999999999976 4688999998865432 235678899999998 69999999999853
Q ss_pred ------CCeEEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCe
Q 011005 274 ------KKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEA 347 (496)
Q Consensus 274 ------~~~~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~ 347 (496)
....+++|||+++|+|.+++..... ..+++..+..++.|++.|++||| +.+++|+||+|+||++++++.+
T Consensus 85 ~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~qi~~al~~LH---~~~ivH~dl~~~nili~~~~~~ 160 (282)
T cd06636 85 KSPPGHDDQLWLVMEFCGAGSVTDLVKNTKG-NALKEDWIAYICREILRGLAHLH---AHKVIHRDIKGQNVLLTENAEV 160 (282)
T ss_pred ccccCCCCEEEEEEEeCCCCcHHHHHHHccC-CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCE
Confidence 4578999999999999998875432 25788888999999999999999 7899999999999999999999
Q ss_pred EEccccccccccCCCCCccccccccccccccccc-----cCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcc
Q 011005 348 FVADFGTARLLHADSSNRTLLAGTYGYIAPELAY-----TMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKI 422 (496)
Q Consensus 348 kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~ 422 (496)
+|+|||++..............|++.|+|||.+. +..++.++||||+|+++|+|++|+.||...... .
T Consensus 161 ~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~-------~ 233 (282)
T cd06636 161 KLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPM-------R 233 (282)
T ss_pred EEeeCcchhhhhccccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHH-------h
Confidence 9999999876543333334456889999999876 346788999999999999999999998643211 1
Q ss_pred hhHhhhcCCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHH
Q 011005 423 MLIDVLDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLI 474 (496)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~ 474 (496)
.............. .......+.+++.+||+.||.+|||+.|+++|+|+
T Consensus 234 ~~~~~~~~~~~~~~---~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~~~~ 282 (282)
T cd06636 234 ALFLIPRNPPPKLK---SKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKHPFI 282 (282)
T ss_pred hhhhHhhCCCCCCc---ccccCHHHHHHHHHHhCCChhhCcCHHHHhcCCCC
Confidence 11111111111111 11122357899999999999999999999999885
No 181
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=3.5e-39 Score=307.30 Aligned_cols=256 Identities=25% Similarity=0.342 Sum_probs=201.1
Q ss_pred HhCCCCcceeeecCCeeEEEEEeCC------CcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeE
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLPN------GKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCM 277 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 277 (496)
.++|.+.+.||+|++|.||+|.+.+ +..|++|.+...........+.+|+.++++++|+||+++++++.+....
T Consensus 5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 84 (277)
T cd05036 5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLPR 84 (277)
T ss_pred HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCc
Confidence 5679999999999999999997653 5678999887654444446788999999999999999999999998899
Q ss_pred EEEEEecCCCChhhhhhCCCC----CccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCC---CeEEc
Q 011005 278 FLIYEYMERGSLFCNLHNNED----AVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKL---EAFVA 350 (496)
Q Consensus 278 ~lV~e~~~~g~L~~~l~~~~~----~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~---~~kl~ 350 (496)
++||||+++++|.+++..... ...+++..++.++.||+.||+||| +.+++||||||+||+++.++ .+||+
T Consensus 85 ~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~nil~~~~~~~~~~kl~ 161 (277)
T cd05036 85 FILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLE---ENHFIHRDIAARNCLLTCKGPGRVAKIA 161 (277)
T ss_pred EEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccchheEEEeccCCCcceEec
Confidence 999999999999999876432 235899999999999999999999 77999999999999998754 58999
Q ss_pred cccccccccCCCCC--ccccccccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccCCCCCCcchhHhh
Q 011005 351 DFGTARLLHADSSN--RTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSSDPKIMLIDV 427 (496)
Q Consensus 351 Dfg~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~ 427 (496)
|||+++........ ......+..|+|||++.+..++.++|||||||++|||++ |+.||+.... ......
T Consensus 162 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~--------~~~~~~ 233 (277)
T cd05036 162 DFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTN--------QEVMEF 233 (277)
T ss_pred cCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCH--------HHHHHH
Confidence 99999876322211 112233567999999999999999999999999999997 9999863211 111222
Q ss_pred hcCCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHH
Q 011005 428 LDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFL 473 (496)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~ 473 (496)
+.......... .....+.+++.+||+.+|++|||+.++++++.
T Consensus 234 ~~~~~~~~~~~---~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~ 276 (277)
T cd05036 234 VTGGGRLDPPK---GCPGPVYRIMTDCWQHTPEDRPNFATILERIQ 276 (277)
T ss_pred HHcCCcCCCCC---CCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence 21111111101 11235778999999999999999999999874
No 182
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=6.9e-40 Score=292.62 Aligned_cols=273 Identities=22% Similarity=0.351 Sum_probs=221.5
Q ss_pred cHHHHHHHHhCCCCcceeeecCCeeEEEE-EeCCCcEEEEEEcccchhHHHHHHHHHHHHHHHhhc-ccccccccceeec
Q 011005 196 VYEDLIEATEDFDIRYCIGTGGYGSVYKA-QLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVL-HRNIVKLYGYCLH 273 (496)
Q Consensus 196 ~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~ 273 (496)
+|+|..+.+++. ||+|+|+.|-.+ ...+|..||||++.+.. .....++.+|++++...+ |+||++++++|++
T Consensus 74 ~F~d~YkLt~e~-----LGeGAyasVqtcv~i~t~~EYAVKiidKq~-gHsR~RvfREVe~f~~Cqgh~nilqLiefFEd 147 (463)
T KOG0607|consen 74 KFEDMYKLTSEL-----LGEGAYASVQTCVSIQTGKEYAVKIIDKQP-GHSRSRVFREVETFYQCQGHKNILQLIEFFED 147 (463)
T ss_pred hHHHHHHhHHHH-----hcCccceeeeeeeeeccchhhhhhhhhcCC-chHHHHHHHHHHHHHHhcCCccHHHHHHHhcc
Confidence 478888877754 999999999998 57789999999997763 234567889999999995 9999999999999
Q ss_pred CCeEEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCC---eEEc
Q 011005 274 KKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLE---AFVA 350 (496)
Q Consensus 274 ~~~~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~---~kl~ 350 (496)
+...|+|||.|.||+|..++++.. .|++.++..+.++|+.||.+|| ++||.|||+||+|||...... +|||
T Consensus 148 d~~FYLVfEKm~GGplLshI~~~~---~F~E~EAs~vvkdia~aLdFlH---~kgIAHRDlKPENiLC~~pn~vsPvKiC 221 (463)
T KOG0607|consen 148 DTRFYLVFEKMRGGPLLSHIQKRK---HFNEREASRVVKDIASALDFLH---TKGIAHRDLKPENILCESPNKVSPVKIC 221 (463)
T ss_pred cceEEEEEecccCchHHHHHHHhh---hccHHHHHHHHHHHHHHHHHHh---hcCcccccCCccceeecCCCCcCceeee
Confidence 999999999999999999998766 7999999999999999999999 889999999999999976544 7999
Q ss_pred cccccccccCCCC-------Cccccccccccccccccc-----cCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCC
Q 011005 351 DFGTARLLHADSS-------NRTLLAGTYGYIAPELAY-----TMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSS 418 (496)
Q Consensus 351 Dfg~~~~~~~~~~-------~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~ 418 (496)
||.+...+..... ...+.+|+..|||||+.. ...|+.++|.||||+|+|-|++|.+||.......=.+
T Consensus 222 DfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGW 301 (463)
T KOG0607|consen 222 DFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGW 301 (463)
T ss_pred ccccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCc
Confidence 9999876532211 123467888999999753 2468899999999999999999999997554322111
Q ss_pred CC-------cchhHhhhcCCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCCC
Q 011005 419 DP-------KIMLIDVLDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTPL 480 (496)
Q Consensus 419 ~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~~ 480 (496)
+. .....+-+...-....+..+........+++...+..|+.+|.++.++++|+|+.+-.+.
T Consensus 302 drGe~Cr~CQ~~LFesIQEGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vlnhPw~~~~~~e 370 (463)
T KOG0607|consen 302 DRGEVCRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLNHPWVQRCAPE 370 (463)
T ss_pred cCCCccHHHHHHHHHHHhccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccCCccccccchh
Confidence 11 223344444444444555566666778899999999999999999999999999876554
No 183
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=6.7e-39 Score=303.59 Aligned_cols=260 Identities=23% Similarity=0.301 Sum_probs=207.3
Q ss_pred hCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccch--hHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEE
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIY 281 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~ 281 (496)
++|++.+.||+|+||.||+|... +|+.||+|.++... .....+.+.+|++++++++|+|++++++++...+..++||
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 81 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL 81 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 57899999999999999999776 78999999886422 2233567889999999999999999999999999999999
Q ss_pred EecCCCChhhhhhCCC-CCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccC
Q 011005 282 EYMERGSLFCNLHNNE-DAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHA 360 (496)
Q Consensus 282 e~~~~g~L~~~l~~~~-~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 360 (496)
||+++|+|..++.... ....++...+..++.|++.||+||| +.+++||||+|+||+++.++.++|+|||++.....
T Consensus 82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~ 158 (267)
T cd08224 82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMH---SKRIMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHH---hCCEecCCcChhhEEECCCCcEEEeccceeeeccC
Confidence 9999999999886532 2335889999999999999999999 78999999999999999999999999999987654
Q ss_pred CCCCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhH
Q 011005 361 DSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKV 440 (496)
Q Consensus 361 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 440 (496)
.........+++.|+|||.+.+..++.++||||+|+++|+|++|+.||.... .......+........+.. .
T Consensus 159 ~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~------~~~~~~~~~~~~~~~~~~~--~ 230 (267)
T cd08224 159 KTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDK------MNLYSLCKKIEKCDYPPLP--A 230 (267)
T ss_pred CCcccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCC------ccHHHHHhhhhcCCCCCCC--h
Confidence 4333344568889999999999899999999999999999999999985321 0000111111111111111 1
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHh
Q 011005 441 IRDILLISTVSFACLQSNPKSRPTMQSVSQEFLIT 475 (496)
Q Consensus 441 ~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~ 475 (496)
......+.+++.+||..+|++|||+.++++.+...
T Consensus 231 ~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~ 265 (267)
T cd08224 231 DHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEM 265 (267)
T ss_pred hhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHh
Confidence 12223577899999999999999999999887543
No 184
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=2.6e-39 Score=315.60 Aligned_cols=265 Identities=17% Similarity=0.269 Sum_probs=197.6
Q ss_pred Ccceeeec--CCeeEEEEEe-CCCcEEEEEEcccch-hHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEec
Q 011005 209 IRYCIGTG--GYGSVYKAQL-PNGKVFALKKLHTSE-ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEYM 284 (496)
Q Consensus 209 ~~~~lg~G--~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~~ 284 (496)
+.+.||+| +|++||++.. ++|+.||+|.+.... .....+.+.+|+.+++.++||||+++++++..++..++||||+
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 81 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM 81 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEecc
Confidence 45679999 6789999965 578999999987643 2233456788999999999999999999999999999999999
Q ss_pred CCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCCC
Q 011005 285 ERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSN 364 (496)
Q Consensus 285 ~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 364 (496)
++|+|.+++..... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.++++||+.+.........
T Consensus 82 ~~~~l~~~~~~~~~-~~l~~~~~~~i~~qi~~~L~~LH---~~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~ 157 (327)
T cd08227 82 AYGSAKDLICTHFM-DGMSELAIAYILQGVLKALDYIH---HMGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQR 157 (327)
T ss_pred CCCcHHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCChhhEEEecCCcEEEcccchhhcccccccc
Confidence 99999999875432 25889999999999999999999 789999999999999999999999999876543221111
Q ss_pred -------cccccccccccccccccc--CCcCcccchhhHHHHHHHHHhCCCCCccccccCC------CCCC-----cchh
Q 011005 365 -------RTLLAGTYGYIAPELAYT--MVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSS------SSDP-----KIML 424 (496)
Q Consensus 365 -------~~~~~gt~~y~aPE~~~~--~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~------~~~~-----~~~~ 424 (496)
.....++..|+|||++.+ ..++.++||||+||++|||++|+.||........ ...+ ....
T Consensus 158 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (327)
T cd08227 158 LRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTTTIP 237 (327)
T ss_pred ccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCccccccccchh
Confidence 112346678999999876 4688999999999999999999999964321000 0000 0000
Q ss_pred Hhhh---------cC----------CCCCC----CChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhcc
Q 011005 425 IDVL---------DQ----------RLPPP----VDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRK 477 (496)
Q Consensus 425 ~~~~---------~~----------~~~~~----~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~ 477 (496)
.+.. +. ..+.. ...........+.+++.+||+.||++|||++|+++|+|+.+.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~p~f~~~ 313 (327)
T cd08227 238 AEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQI 313 (327)
T ss_pred hhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcChhhhhc
Confidence 0000 00 00000 000011122357899999999999999999999999999764
No 185
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=4.9e-39 Score=301.90 Aligned_cols=246 Identities=26% Similarity=0.405 Sum_probs=195.3
Q ss_pred ceeeecCCeeEEEEEeC-CCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEecCCCCh
Q 011005 211 YCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEYMERGSL 289 (496)
Q Consensus 211 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~~~~g~L 289 (496)
+.||+|+||.||+|..+ +++.||+|.+......+....+.+|++++++++||||+++++++......++||||+++++|
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF 80 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcH
Confidence 35899999999999764 78899999887654444456789999999999999999999999999999999999999999
Q ss_pred hhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCCCc--cc
Q 011005 290 FCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNR--TL 367 (496)
Q Consensus 290 ~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~--~~ 367 (496)
.+++.... ..+++..++.++.|++.||+||| +.+++||||||+||+++.++.++|+|||++.......... ..
T Consensus 81 ~~~~~~~~--~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 155 (252)
T cd05084 81 LTFLRTEG--PRLKVKELIQMVENAAAGMEYLE---SKHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGM 155 (252)
T ss_pred HHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHH---hCCccccccchheEEEcCCCcEEECccccCcccccccccccCCC
Confidence 99987533 25789999999999999999999 7899999999999999999999999999987643221111 11
Q ss_pred cccccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHHHHHHH
Q 011005 368 LAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVIRDILL 446 (496)
Q Consensus 368 ~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (496)
...+..|+|||.+.+..++.++||||+|+++|||++ |..||..... ................. .....
T Consensus 156 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~--------~~~~~~~~~~~~~~~~~---~~~~~ 224 (252)
T cd05084 156 KQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSN--------QQTREAIEQGVRLPCPE---LCPDA 224 (252)
T ss_pred CCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCH--------HHHHHHHHcCCCCCCcc---cCCHH
Confidence 123456999999999999999999999999999998 8888863221 11122222221111111 11235
Q ss_pred HHHHHHhcccCCCCCCCCHHHHHHHH
Q 011005 447 ISTVSFACLQSNPKSRPTMQSVSQEF 472 (496)
Q Consensus 447 l~~li~~cl~~dP~~Rps~~evl~~~ 472 (496)
+.+++.+||+.+|++|||+.|+++.+
T Consensus 225 ~~~li~~~l~~~p~~Rps~~~~~~~l 250 (252)
T cd05084 225 VYRLMERCWEYDPGQRPSFSTVHQEL 250 (252)
T ss_pred HHHHHHHHcCCChhhCcCHHHHHHHH
Confidence 77899999999999999999999875
No 186
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=2.9e-39 Score=304.13 Aligned_cols=254 Identities=24% Similarity=0.386 Sum_probs=205.9
Q ss_pred CCCCcceeeecCCeeEEEEEe-CCCcEEEEEEcccch-hHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEe
Q 011005 206 DFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSE-ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEY 283 (496)
Q Consensus 206 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~ 283 (496)
+|++.+.||+|+||.+|++.. .+++.||+|.+.... .....+.+.+|+.++++++|+||+++++++...+..++|+||
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDY 80 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEec
Confidence 588899999999999999965 468899999986532 223346788999999999999999999999999999999999
Q ss_pred cCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCC
Q 011005 284 MERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSS 363 (496)
Q Consensus 284 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 363 (496)
+++++|.+.+..... ..+++..++.++.|++.|+.||| +.+++|+||+|+||+++.++.++++|||++........
T Consensus 81 ~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~ 156 (256)
T cd08218 81 CEGGDLYKKINAQRG-VLFPEDQILDWFVQICLALKHVH---DRKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVE 156 (256)
T ss_pred CCCCcHHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCEEEeeccceeecCcchh
Confidence 999999998875432 25788999999999999999999 78999999999999999999999999999976644332
Q ss_pred CccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHHHH
Q 011005 364 NRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVIRD 443 (496)
Q Consensus 364 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 443 (496)
......+++.|+|||++.+..++.++|+||||+++|++++|+.||... ..............+.... ..
T Consensus 157 ~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~-------~~~~~~~~~~~~~~~~~~~----~~ 225 (256)
T cd08218 157 LARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAG-------NMKNLVLKIIRGSYPPVSS----HY 225 (256)
T ss_pred hhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCC-------CHHHHHHHHhcCCCCCCcc----cC
Confidence 233345788999999999999999999999999999999999998622 1112222222222221111 11
Q ss_pred HHHHHHHHHhcccCCCCCCCCHHHHHHHHHH
Q 011005 444 ILLISTVSFACLQSNPKSRPTMQSVSQEFLI 474 (496)
Q Consensus 444 ~~~l~~li~~cl~~dP~~Rps~~evl~~~~~ 474 (496)
...+.+++.+||+.+|++||++.++++|+|+
T Consensus 226 ~~~~~~li~~~l~~~p~~Rp~~~~vl~~~~~ 256 (256)
T cd08218 226 SYDLRNLVSQLFKRNPRDRPSVNSILEKNFI 256 (256)
T ss_pred CHHHHHHHHHHhhCChhhCcCHHHHhhCcCC
Confidence 2347789999999999999999999999874
No 187
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=9.5e-40 Score=326.01 Aligned_cols=262 Identities=23% Similarity=0.286 Sum_probs=201.3
Q ss_pred HhCCCCcceeeecCCeeEEEEEeC---CCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEE
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLP---NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLI 280 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV 280 (496)
..+|.+.+.||+|+||.||+|... .++.||+|.+.... ...+|++++++++||||+++++++......++|
T Consensus 91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~~------~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv 164 (392)
T PHA03207 91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGGK------TPGREIDILKTISHRAIINLIHAYRWKSTVCMV 164 (392)
T ss_pred cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEeccccc------cHHHHHHHHHhcCCCCccceeeeEeeCCEEEEE
Confidence 357999999999999999999643 46789999886532 346899999999999999999999999999999
Q ss_pred EEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccC
Q 011005 281 YEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHA 360 (496)
Q Consensus 281 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 360 (496)
||++. ++|.+++... ..+++..++.++.||+.||.||| ..+|+||||||+|||++.++.++|+|||+++....
T Consensus 165 ~e~~~-~~l~~~l~~~---~~l~~~~~~~i~~ql~~aL~~LH---~~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~ 237 (392)
T PHA03207 165 MPKYK-CDLFTYVDRS---GPLPLEQAITIQRRLLEALAYLH---GRGIIHRDVKTENIFLDEPENAVLGDFGAACKLDA 237 (392)
T ss_pred ehhcC-CCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEcCCCCEEEccCccccccCc
Confidence 99996 5888888433 26899999999999999999999 78999999999999999999999999999976644
Q ss_pred CCCC--ccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCC------------------CCCC
Q 011005 361 DSSN--RTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSS------------------SSDP 420 (496)
Q Consensus 361 ~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~------------------~~~~ 420 (496)
.... .....||+.|+|||++.+..++.++||||+||++|||++|+.||........ ....
T Consensus 238 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~ 317 (392)
T PHA03207 238 HPDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNG 317 (392)
T ss_pred ccccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCcc
Confidence 3222 2245789999999999999999999999999999999999999854321100 0000
Q ss_pred cchhHhh---hcCCCCCCCC--hh--HHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccC
Q 011005 421 KIMLIDV---LDQRLPPPVD--RK--VIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKT 478 (496)
Q Consensus 421 ~~~~~~~---~~~~~~~~~~--~~--~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~ 478 (496)
....... .......+.. .. .......+.+++.+||..||++|||+.|++.|+|+.+..
T Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p~f~~~~ 382 (392)
T PHA03207 318 STNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSLPLFTKEP 382 (392)
T ss_pred chhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhCchhhccc
Confidence 0000000 0000000000 00 001123467899999999999999999999999997653
No 188
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=5.5e-39 Score=303.53 Aligned_cols=252 Identities=26% Similarity=0.417 Sum_probs=200.9
Q ss_pred hCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEe
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEY 283 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~ 283 (496)
.+|.+.+.||+|+||.||+|..+ .++.||+|.+..... ....+.+|++++++++|+||+++++++...+..++||||
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (263)
T cd05052 6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM--EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF 83 (263)
T ss_pred HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCch--HHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEe
Confidence 45888899999999999999764 588999999875432 245688999999999999999999999999999999999
Q ss_pred cCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCC
Q 011005 284 MERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSS 363 (496)
Q Consensus 284 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 363 (496)
+++++|.+++.... ...+++..++.++.|++.||+||| +.+++||||||+||++++++.++|+|||++........
T Consensus 84 ~~~~~L~~~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lH---~~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~ 159 (263)
T cd05052 84 MTYGNLLDYLRECN-RQEVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY 159 (263)
T ss_pred CCCCcHHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHH---hCCEeecccCcceEEEcCCCcEEeCCCcccccccccee
Confidence 99999999987543 235889999999999999999999 78999999999999999999999999999987643322
Q ss_pred Cc-cccccccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHH
Q 011005 364 NR-TLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVI 441 (496)
Q Consensus 364 ~~-~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (496)
.. ....++..|+|||.+.+..++.++||||||+++|||++ |..||.... .. ................
T Consensus 160 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~-------~~-~~~~~~~~~~~~~~~~--- 228 (263)
T cd05052 160 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID-------LS-QVYELLEKGYRMERPE--- 228 (263)
T ss_pred eccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCC-------HH-HHHHHHHCCCCCCCCC---
Confidence 11 11223567999999999999999999999999999998 999985321 11 1111122211111111
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCHHHHHHHHH
Q 011005 442 RDILLISTVSFACLQSNPKSRPTMQSVSQEFL 473 (496)
Q Consensus 442 ~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~ 473 (496)
.....+.+++.+||+.||++|||+.++++.+.
T Consensus 229 ~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~ 260 (263)
T cd05052 229 GCPPKVYELMRACWQWNPSDRPSFAEIHQAFE 260 (263)
T ss_pred CCCHHHHHHHHHHccCCcccCCCHHHHHHHHH
Confidence 11235778999999999999999999998864
No 189
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=6.1e-39 Score=305.84 Aligned_cols=258 Identities=23% Similarity=0.352 Sum_probs=200.6
Q ss_pred hCCCCcceeeecCCeeEEEEEeC-CCc----EEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEE
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLP-NGK----VFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFL 279 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~----~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 279 (496)
++|++.+.||+|+||+||+|.+. +++ .+++|.+...........+..|+.++++++||||+++++++.. ...++
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~-~~~~~ 85 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPG-ASLQL 85 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECC-CccEE
Confidence 56888999999999999999763 344 4788887654433445677888889999999999999998754 45778
Q ss_pred EEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEcccccccccc
Q 011005 280 IYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLH 359 (496)
Q Consensus 280 V~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 359 (496)
++||+++|+|.+++.... ..+++..+..++.||+.||+||| +.+++||||||+||++++++.+||+|||+++...
T Consensus 86 i~e~~~~gsL~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~lH---~~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~ 160 (279)
T cd05111 86 VTQLSPLGSLLDHVRQHR--DSLDPQRLLNWCVQIAKGMYYLE---EHRMVHRNLAARNILLKSDSIVQIADFGVADLLY 160 (279)
T ss_pred EEEeCCCCcHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHH---HCCEeccccCcceEEEcCCCcEEEcCCccceecc
Confidence 999999999999997543 26889999999999999999999 7799999999999999999999999999998664
Q ss_pred CCCC--CccccccccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccCCCCCCcchhHhhhcCCCCCCC
Q 011005 360 ADSS--NRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPV 436 (496)
Q Consensus 360 ~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (496)
.... ......++..|+|||.+.+..++.++||||||+++||+++ |+.||..... ....+.+........
T Consensus 161 ~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~--------~~~~~~~~~~~~~~~ 232 (279)
T cd05111 161 PDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRP--------HEVPDLLEKGERLAQ 232 (279)
T ss_pred CCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCH--------HHHHHHHHCCCcCCC
Confidence 3322 1223446778999999999999999999999999999998 9999863221 111222222111111
Q ss_pred ChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCC
Q 011005 437 DRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTP 479 (496)
Q Consensus 437 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~ 479 (496)
... ....+.+++.+||..||++|||+.|+++.+....+.+
T Consensus 233 ~~~---~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~~~ 272 (279)
T cd05111 233 PQI---CTIDVYMVMVKCWMIDENVRPTFKELANEFTRMARDP 272 (279)
T ss_pred CCC---CCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHhCC
Confidence 111 1224567889999999999999999999887655443
No 190
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=1.5e-39 Score=311.25 Aligned_cols=264 Identities=25% Similarity=0.335 Sum_probs=202.6
Q ss_pred hCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchh-HHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEE
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEE-LAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYE 282 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e 282 (496)
++|++.+.||+|++|.||+|..+ +++.||+|++..... ....+.+.+|+.++++++|+|++++++++..+...++|||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e 80 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFE 80 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEe
Confidence 46888999999999999999775 589999998865432 2233567899999999999999999999999999999999
Q ss_pred ecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCC
Q 011005 283 YMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADS 362 (496)
Q Consensus 283 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 362 (496)
|++++++..+..... .+++..+..++.|++.||+||| +.+++||||||+||+++.++.++|+|||++.......
T Consensus 81 ~~~~~~l~~~~~~~~---~~~~~~~~~~~~ql~~~l~~LH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~ 154 (286)
T cd07847 81 YCDHTVLNELEKNPR---GVPEHLIKKIIWQTLQAVNFCH---KHNCIHRDVKPENILITKQGQIKLCDFGFARILTGPG 154 (286)
T ss_pred ccCccHHHHHHhCCC---CCCHHHHHHHHHHHHHHHHHHH---HCCceecCCChhhEEEcCCCcEEECccccceecCCCc
Confidence 999988887765433 5899999999999999999999 7899999999999999999999999999998775443
Q ss_pred CCcccccccccccccccccc-CCcCcccchhhHHHHHHHHHhCCCCCccccccCC----------CCCCcchh---Hhhh
Q 011005 363 SNRTLLAGTYGYIAPELAYT-MVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSS----------SSDPKIML---IDVL 428 (496)
Q Consensus 363 ~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~----------~~~~~~~~---~~~~ 428 (496)
.......++..|+|||.+.+ ..++.++||||+|+++|+|++|+.||........ ........ ....
T Consensus 155 ~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (286)
T cd07847 155 DDYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFF 234 (286)
T ss_pred ccccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhccccccc
Confidence 33334567889999999876 5678899999999999999999999964321100 00000000 0000
Q ss_pred cC-CCCCCCChh-----HHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHH
Q 011005 429 DQ-RLPPPVDRK-----VIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLI 474 (496)
Q Consensus 429 ~~-~~~~~~~~~-----~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~ 474 (496)
.. ..+.+.... .......+.+++.+||+.||++|||+.|+++|+|+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~~~f 286 (286)
T cd07847 235 KGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEHPYF 286 (286)
T ss_pred ccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcCCCC
Confidence 00 001000000 00112457899999999999999999999999885
No 191
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=3.8e-39 Score=309.64 Aligned_cols=257 Identities=24% Similarity=0.379 Sum_probs=203.3
Q ss_pred HhCCCCcceeeecCCeeEEEEEeC------CCcEEEEEEcccchhHHHHHHHHHHHHHHHhh-cccccccccceeecCCe
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLP------NGKVFALKKLHTSEELAFIKSFKNEAQVLSQV-LHRNIVKLYGYCLHKKC 276 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~ 276 (496)
.++|++.+.||+|+||.||+|... ....+|+|.+...........+.+|+.+++++ +|+||+++++++..++.
T Consensus 11 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~ 90 (293)
T cd05053 11 RDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEGP 90 (293)
T ss_pred HhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCCC
Confidence 467889999999999999999764 24679999987654444456788999999999 79999999999999999
Q ss_pred EEEEEEecCCCChhhhhhCC-------------CCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecC
Q 011005 277 MFLIYEYMERGSLFCNLHNN-------------EDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNS 343 (496)
Q Consensus 277 ~~lV~e~~~~g~L~~~l~~~-------------~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~ 343 (496)
.+++|||+++|+|..++... .....+++..++.++.|++.||+||| ..+++||||||+||+++.
T Consensus 91 ~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH---~~~ivH~dlkp~Nil~~~ 167 (293)
T cd05053 91 LYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLA---SKKCIHRDLAARNVLVTE 167 (293)
T ss_pred eEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHH---HCCccccccceeeEEEcC
Confidence 99999999999999998643 22346899999999999999999999 789999999999999999
Q ss_pred CCCeEEccccccccccCCCCC--ccccccccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccCCCCCC
Q 011005 344 KLEAFVADFGTARLLHADSSN--RTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSSDP 420 (496)
Q Consensus 344 ~~~~kl~Dfg~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~~~ 420 (496)
++.++|+|||+++.+...... .....++..|+|||.+.+..++.++||||||+++||+++ |..||.... .
T Consensus 168 ~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~-------~ 240 (293)
T cd05053 168 DHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIP-------V 240 (293)
T ss_pred CCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCC-------H
Confidence 999999999999876433211 112234568999999999999999999999999999997 999875321 1
Q ss_pred cchhHhhhcCCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHH
Q 011005 421 KIMLIDVLDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLI 474 (496)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~ 474 (496)
. ................ .....+.+++.+||+.||++|||+.|+++++..
T Consensus 241 ~-~~~~~~~~~~~~~~~~---~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~ 290 (293)
T cd05053 241 E-ELFKLLKEGYRMEKPQ---NCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDR 290 (293)
T ss_pred H-HHHHHHHcCCcCCCCC---CCCHHHHHHHHHHcccCcccCcCHHHHHHHHHH
Confidence 1 1111111111111111 112347789999999999999999999999754
No 192
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=6.1e-39 Score=309.27 Aligned_cols=256 Identities=24% Similarity=0.369 Sum_probs=203.8
Q ss_pred HhCCCCcceeeecCCeeEEEEEeC------CCcEEEEEEcccchhHHHHHHHHHHHHHHHhh-cccccccccceeecCCe
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLP------NGKVFALKKLHTSEELAFIKSFKNEAQVLSQV-LHRNIVKLYGYCLHKKC 276 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~ 276 (496)
.++|.+.+.||+|+||.||+|... .+..||+|.++........+.+.+|+++++++ +|+||+++++++...+.
T Consensus 34 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 113 (302)
T cd05055 34 RNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGP 113 (302)
T ss_pred HHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCc
Confidence 467999999999999999999641 35579999987654444456789999999999 79999999999999999
Q ss_pred EEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccc
Q 011005 277 MFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTAR 356 (496)
Q Consensus 277 ~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~ 356 (496)
.++||||+.+|+|.+++..... ..+++.++..++.|++.||+||| +.+++|+||||+||+++.++.++++|||+++
T Consensus 114 ~~lv~e~~~~~~L~~~i~~~~~-~~l~~~~~~~i~~~i~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~~l~dfg~~~ 189 (302)
T cd05055 114 ILVITEYCCYGDLLNFLRRKRE-SFLTLEDLLSFSYQVAKGMAFLA---SKNCIHRDLAARNVLLTHGKIVKICDFGLAR 189 (302)
T ss_pred eEEEEEcCCCCcHHHHHHhCCC-CCCCHHHHHHHHHHHHHHHHHHH---HCCeehhhhccceEEEcCCCeEEECCCcccc
Confidence 9999999999999999975432 24899999999999999999999 7799999999999999999999999999998
Q ss_pred cccCCCCC--ccccccccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccCCCCCCcchhHhhhcCCCC
Q 011005 357 LLHADSSN--RTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSSDPKIMLIDVLDQRLP 433 (496)
Q Consensus 357 ~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (496)
........ .....++..|+|||.+.+..++.++||||+|+++|+|++ |..||..... .............
T Consensus 190 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~-------~~~~~~~~~~~~~ 262 (302)
T cd05055 190 DIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPV-------DSKFYKLIKEGYR 262 (302)
T ss_pred cccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCc-------hHHHHHHHHcCCc
Confidence 66433211 112345678999999999999999999999999999998 9999863221 1111222222111
Q ss_pred CCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHH
Q 011005 434 PPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFL 473 (496)
Q Consensus 434 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~ 473 (496)
..... .....+.+++.+||+.+|++|||+.|+++.+.
T Consensus 263 ~~~~~---~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~ 299 (302)
T cd05055 263 MAQPE---HAPAEIYDIMKTCWDADPLKRPTFKQIVQLIG 299 (302)
T ss_pred CCCCC---CCCHHHHHHHHHHcCCCchhCcCHHHHHHHHH
Confidence 11111 11235789999999999999999999998874
No 193
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=3.8e-39 Score=313.05 Aligned_cols=258 Identities=23% Similarity=0.327 Sum_probs=209.3
Q ss_pred hCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchhH--HHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEE
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEEL--AFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIY 281 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~ 281 (496)
++|++.+.||+|++|+||+|... +++.||+|.+...... ...+.+.+|+++++.++|+||+++++.+...+..++||
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 80 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVM 80 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEE
Confidence 36888999999999999999765 4899999999764322 34567889999999999999999999999999999999
Q ss_pred EecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCC
Q 011005 282 EYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHAD 361 (496)
Q Consensus 282 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 361 (496)
||+.+++|.+++.... ...+++..+..++.|++.||+||| +.+++|+||||+||+++.++.++|+|||++......
T Consensus 81 e~~~~~~L~~~~~~~~-~~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~ 156 (316)
T cd05574 81 DYCPGGELFRLLQRQP-GKCLSEEVARFYAAEVLLALEYLH---LLGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVE 156 (316)
T ss_pred EecCCCCHHHHHHhCC-CCccCHHHHHHHHHHHHHHHHHHH---HCCeeccCCChHHeEEcCCCCEEEeecchhhccccc
Confidence 9999999999987543 336899999999999999999999 789999999999999999999999999998754321
Q ss_pred CC-----------------------------CccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCcccc
Q 011005 362 SS-----------------------------NRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILS 412 (496)
Q Consensus 362 ~~-----------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~ 412 (496)
.. ......|+..|+|||++.+..++.++||||||+++|+|++|+.||....
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~ 236 (316)
T cd05574 157 PPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSN 236 (316)
T ss_pred ccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCc
Confidence 11 0112357889999999999999999999999999999999999986322
Q ss_pred ccCCCCCCcchhHhhhcCCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCC----HHHHHHHHHHhc
Q 011005 413 SLSSSSDPKIMLIDVLDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPT----MQSVSQEFLITR 476 (496)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps----~~evl~~~~~~~ 476 (496)
...............+... .....+.+++.+||+.||++||| ++|+++|+|+..
T Consensus 237 -------~~~~~~~~~~~~~~~~~~~---~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~~~~~~ 294 (316)
T cd05574 237 -------RDETFSNILKKEVTFPGSP---PVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQHPFFRG 294 (316)
T ss_pred -------hHHHHHHHhcCCccCCCcc---ccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcCchhhc
Confidence 1222233333322222111 12345789999999999999999 999999999865
No 194
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=4.5e-39 Score=304.19 Aligned_cols=260 Identities=29% Similarity=0.435 Sum_probs=213.2
Q ss_pred hCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEe
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEY 283 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~ 283 (496)
++|++.+.||+|++|.||+|..+ +++.|++|++...........+.+|+.++++++|+|++++++++..++..++||||
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEY 80 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEe
Confidence 36888999999999999999776 58999999987765434557789999999999999999999999999999999999
Q ss_pred cCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCC-CCeEEeCCCCCceEecCCCCeEEccccccccccCCC
Q 011005 284 MERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCS-PSIIHRDISSNNILLNSKLEAFVADFGTARLLHADS 362 (496)
Q Consensus 284 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~-~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 362 (496)
+++++|.+++... ..++...+..++.|++.|++||| + .+++|+||+|+||+++.++.++|+|||.+.......
T Consensus 81 ~~~~~L~~~l~~~---~~l~~~~~~~~~~~l~~~l~~lh---~~~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~ 154 (264)
T cd06623 81 MDGGSLADLLKKV---GKIPEPVLAYIARQILKGLDYLH---TKRHIIHRDIKPSNLLINSKGEVKIADFGISKVLENTL 154 (264)
T ss_pred cCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHh---ccCCCccCCCCHHHEEECCCCCEEEccCccceecccCC
Confidence 9999999999765 26899999999999999999999 7 899999999999999999999999999998775544
Q ss_pred CCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHHH
Q 011005 363 SNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVIR 442 (496)
Q Consensus 363 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (496)
.......++..|+|||.+.+..++.++|+||||+++|+|++|+.||..... ...............+ ..... .
T Consensus 155 ~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~----~~~~~~~~~~~~~~~~-~~~~~--~ 227 (264)
T cd06623 155 DQCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQ----PSFFELMQAICDGPPP-SLPAE--E 227 (264)
T ss_pred CcccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccc----cCHHHHHHHHhcCCCC-CCCcc--c
Confidence 433345678899999999999999999999999999999999999864431 0111111222211111 11111 0
Q ss_pred HHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhcc
Q 011005 443 DILLISTVSFACLQSNPKSRPTMQSVSQEFLITRK 477 (496)
Q Consensus 443 ~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~ 477 (496)
....+.+++.+||..+|++|||+.|+++++|+...
T Consensus 228 ~~~~l~~li~~~l~~~p~~R~~~~~ll~~~~~~~~ 262 (264)
T cd06623 228 FSPEFRDFISACLQKDPKKRPSAAELLQHPFIKKA 262 (264)
T ss_pred CCHHHHHHHHHHccCChhhCCCHHHHHhCHHHHhc
Confidence 23457899999999999999999999999998643
No 195
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=5e-39 Score=308.63 Aligned_cols=261 Identities=25% Similarity=0.362 Sum_probs=206.6
Q ss_pred HhCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEE
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYE 282 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e 282 (496)
.+.|++.+.||+|+||.||+|... +++.|++|.+.... ....+.+.+|+.+++.++|+||+++++.+..++..++|||
T Consensus 11 ~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 89 (292)
T cd06644 11 NEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKS-EEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIE 89 (292)
T ss_pred chhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCC-HHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEe
Confidence 367889999999999999999765 58899999987654 3345678899999999999999999999999999999999
Q ss_pred ecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCC
Q 011005 283 YMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADS 362 (496)
Q Consensus 283 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 362 (496)
|+++++|..++.... ..+++..+..++.|++.|+.||| +.+++||||||+||+++.++.++|+|||++.......
T Consensus 90 ~~~~~~l~~~~~~~~--~~l~~~~~~~~~~ql~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~ 164 (292)
T cd06644 90 FCPGGAVDAIMLELD--RGLTEPQIQVICRQMLEALQYLH---SMKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTL 164 (292)
T ss_pred cCCCCcHHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHh---cCCeeecCCCcceEEEcCCCCEEEccCccceeccccc
Confidence 999999988876433 25789999999999999999999 7899999999999999999999999999987654333
Q ss_pred CCccccccccccccccccc-----cCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCC
Q 011005 363 SNRTLLAGTYGYIAPELAY-----TMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVD 437 (496)
Q Consensus 363 ~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (496)
.......+++.|+|||++. ...++.++||||||+++|+|++|+.||..... ............+....
T Consensus 165 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~-------~~~~~~~~~~~~~~~~~ 237 (292)
T cd06644 165 QRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNP-------MRVLLKIAKSEPPTLSQ 237 (292)
T ss_pred cccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccH-------HHHHHHHhcCCCccCCC
Confidence 3334456788999999985 34567899999999999999999999864321 11112221111111000
Q ss_pred hhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCC
Q 011005 438 RKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTP 479 (496)
Q Consensus 438 ~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~ 479 (496)
.......+.+++.+||+.||++||++.|+++|+|+.....
T Consensus 238 --~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~ 277 (292)
T cd06644 238 --PSKWSMEFRDFLKTALDKHPETRPSAAQLLEHPFVSSVTS 277 (292)
T ss_pred --CcccCHHHHHHHHHHhcCCcccCcCHHHHhcCcccccccc
Confidence 1111224678999999999999999999999999865433
No 196
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=7.6e-39 Score=305.32 Aligned_cols=259 Identities=25% Similarity=0.409 Sum_probs=203.8
Q ss_pred HhCCCCcceeeecCCeeEEEEEe-CCCc----EEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEE
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQL-PNGK----VFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMF 278 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~----~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 278 (496)
.++|++.+.||+|+||+||+|.+ .+++ .||+|.+...........+.+|+.+++.+.|+||+++++++... ..+
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~ 84 (279)
T cd05109 6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLTS-TVQ 84 (279)
T ss_pred hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcCC-CcE
Confidence 35788999999999999999975 3444 48999987655444557788999999999999999999998764 467
Q ss_pred EEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccc
Q 011005 279 LIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLL 358 (496)
Q Consensus 279 lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 358 (496)
+++||+++|+|.+.+.... ..+++..++.++.|++.||+||| +.+++||||||+||++++++.+||+|||+++..
T Consensus 85 l~~~~~~~g~l~~~l~~~~--~~~~~~~~~~~~~qi~~~L~~lH---~~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~ 159 (279)
T cd05109 85 LVTQLMPYGCLLDYVRENK--DRIGSQDLLNWCVQIAKGMSYLE---EVRLVHRDLAARNVLVKSPNHVKITDFGLARLL 159 (279)
T ss_pred EEEEcCCCCCHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccccccceEEEcCCCcEEECCCCceeec
Confidence 9999999999999987543 26899999999999999999999 789999999999999999999999999999876
Q ss_pred cCCCCCc--cccccccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccCCCCCCcchhHhhhcCCCCCC
Q 011005 359 HADSSNR--TLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSSDPKIMLIDVLDQRLPPP 435 (496)
Q Consensus 359 ~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (496)
....... ....+++.|+|||...+..++.++||||||+++|||++ |..||+... .......+......+
T Consensus 160 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~--------~~~~~~~~~~~~~~~ 231 (279)
T cd05109 160 DIDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIP--------AREIPDLLEKGERLP 231 (279)
T ss_pred ccccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCC--------HHHHHHHHHCCCcCC
Confidence 4332211 11234568999999999999999999999999999998 899986321 111122222211111
Q ss_pred CChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCC
Q 011005 436 VDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTP 479 (496)
Q Consensus 436 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~ 479 (496)
... .....+.+++.+||+.||++||++.++++.+......+
T Consensus 232 ~~~---~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~~ 272 (279)
T cd05109 232 QPP---ICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMARDP 272 (279)
T ss_pred CCc---cCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhcCC
Confidence 111 12234678999999999999999999999887766655
No 197
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=2.3e-39 Score=310.85 Aligned_cols=265 Identities=27% Similarity=0.378 Sum_probs=205.9
Q ss_pred cHHHHHHHHhCCCCcceeeecCCeeEEEEEe-CCCcEEEEEEcccchhHHHHHHHHHHHHHHHhh-cccccccccceeec
Q 011005 196 VYEDLIEATEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSEELAFIKSFKNEAQVLSQV-LHRNIVKLYGYCLH 273 (496)
Q Consensus 196 ~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~ 273 (496)
.+.++..+.++|.+.+.||+|+||.||+|.. .+++.+|+|.+..... ....+.+|+.+++++ +|||++++++++..
T Consensus 13 ~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~--~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~ 90 (291)
T cd06639 13 GLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISD--VDEEIEAEYNILQSLPNHPNVVKFYGMFYK 90 (291)
T ss_pred hcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEeccccc--HHHHHHHHHHHHHHhcCCCCeEEEEEEEEe
Confidence 3445555678999999999999999999976 4688999999865432 225567899999999 79999999999875
Q ss_pred C-----CeEEEEEEecCCCChhhhhhCCC-CCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCe
Q 011005 274 K-----KCMFLIYEYMERGSLFCNLHNNE-DAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEA 347 (496)
Q Consensus 274 ~-----~~~~lV~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~ 347 (496)
. ...++||||+++++|.+++.... ....+++..++.++.|++.||.||| ..+++|+||||+||+++.++.+
T Consensus 91 ~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dlkp~nili~~~~~~ 167 (291)
T cd06639 91 ADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLH---NNRIIHRDVKGNNILLTTEGGV 167 (291)
T ss_pred ccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHEEEcCCCCE
Confidence 3 35899999999999999886421 2336899999999999999999999 7799999999999999999999
Q ss_pred EEccccccccccCCCCCccccccccccccccccccC-----CcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcc
Q 011005 348 FVADFGTARLLHADSSNRTLLAGTYGYIAPELAYTM-----VMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKI 422 (496)
Q Consensus 348 kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~ 422 (496)
+|+|||++..............++..|+|||.+... .++.++||||+|+++|+|++|+.||..... ..
T Consensus 168 kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~-------~~ 240 (291)
T cd06639 168 KLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHP-------VK 240 (291)
T ss_pred EEeecccchhcccccccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcH-------HH
Confidence 999999998765433333345688899999987643 367899999999999999999999863221 11
Q ss_pred hhHhhhcCCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHH
Q 011005 423 MLIDVLDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLI 474 (496)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~ 474 (496)
......... ...... .......+.+++.+||+.+|++||++.|+++|+|+
T Consensus 241 ~~~~~~~~~-~~~~~~-~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~ 290 (291)
T cd06639 241 TLFKIPRNP-PPTLLH-PEKWCRSFNHFISQCLIKDFEARPSVTHLLEHPFI 290 (291)
T ss_pred HHHHHhcCC-CCCCCc-ccccCHHHHHHHHHHhhcChhhCcCHHHHhcCccc
Confidence 111111111 111100 11122347899999999999999999999999987
No 198
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=7.1e-39 Score=302.25 Aligned_cols=252 Identities=27% Similarity=0.432 Sum_probs=201.9
Q ss_pred HhCCCCcceeeecCCeeEEEEEeCCCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEe
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEY 283 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~ 283 (496)
.++|++.+.||+|+||.||+|..++++.||+|.+...... ...+.+|+.++++++|+||+++++++. .+..++||||
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~~--~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~ 81 (260)
T cd05067 5 RETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSMS--PEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYIITEY 81 (260)
T ss_pred hHHceeeeeeccCccceEEeeecCCCceEEEEEecCCCCc--HHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEEEEEc
Confidence 4678999999999999999999888999999998764422 256889999999999999999999874 4568999999
Q ss_pred cCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCC
Q 011005 284 MERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSS 363 (496)
Q Consensus 284 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 363 (496)
+++++|.+++.... ...+++..+..++.|++.||+||| +.+++||||||+||+++.++.++|+|||++........
T Consensus 82 ~~~~~L~~~~~~~~-~~~~~~~~~~~i~~~i~~al~~LH---~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~ 157 (260)
T cd05067 82 MENGSLVDFLKTPE-GIKLTINKLIDMAAQIAEGMAFIE---RKNYIHRDLRAANILVSETLCCKIADFGLARLIEDNEY 157 (260)
T ss_pred CCCCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHh---cCCeecccccHHhEEEcCCCCEEEccCcceeecCCCCc
Confidence 99999999987543 336899999999999999999999 78999999999999999999999999999977653222
Q ss_pred C-ccccccccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHH
Q 011005 364 N-RTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVI 441 (496)
Q Consensus 364 ~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (496)
. .....++..|+|||.+.+..++.++||||||+++||+++ |+.||..... . .....+......+...
T Consensus 158 ~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~-------~-~~~~~~~~~~~~~~~~--- 226 (260)
T cd05067 158 TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTN-------P-EVIQNLERGYRMPRPD--- 226 (260)
T ss_pred ccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCCh-------H-HHHHHHHcCCCCCCCC---
Confidence 1 222345678999999999999999999999999999999 9999863221 1 1111111111111111
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCHHHHHHHHH
Q 011005 442 RDILLISTVSFACLQSNPKSRPTMQSVSQEFL 473 (496)
Q Consensus 442 ~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~ 473 (496)
.....+.+++.+||+.+|++|||++++++.+.
T Consensus 227 ~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 258 (260)
T cd05067 227 NCPEELYELMRLCWKEKPEERPTFEYLRSVLE 258 (260)
T ss_pred CCCHHHHHHHHHHccCChhhCCCHHHHHHHhh
Confidence 11235789999999999999999999988764
No 199
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=3.7e-39 Score=309.25 Aligned_cols=258 Identities=25% Similarity=0.374 Sum_probs=205.7
Q ss_pred CCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEec
Q 011005 206 DFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEYM 284 (496)
Q Consensus 206 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~~ 284 (496)
.|.....||+|+||.||++... ++..||||.+..... ...+.+.+|+.+++.++|+||+++++.+..++..++||||+
T Consensus 23 ~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~ 101 (292)
T cd06658 23 YLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQ-QRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFL 101 (292)
T ss_pred HHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchH-HHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCC
Confidence 3444566999999999999764 688999999865432 33466889999999999999999999999999999999999
Q ss_pred CCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCCC
Q 011005 285 ERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSN 364 (496)
Q Consensus 285 ~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 364 (496)
++++|.+++... .+++.++..++.||+.||+||| +.+++||||||+||++++++.++|+|||++.........
T Consensus 102 ~~~~L~~~~~~~----~l~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~~ 174 (292)
T cd06658 102 EGGALTDIVTHT----RMNEEQIATVCLSVLRALSYLH---NQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPK 174 (292)
T ss_pred CCCcHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---HCCEeecCCCHHHEEEcCCCCEEEccCcchhhccccccc
Confidence 999999988543 5788999999999999999999 779999999999999999999999999999765443333
Q ss_pred ccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHHHHH
Q 011005 365 RTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVIRDI 444 (496)
Q Consensus 365 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (496)
.....++..|+|||.+.+..++.++||||+|+++|||++|+.||..... ..... ......+..... .....
T Consensus 175 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~-------~~~~~-~~~~~~~~~~~~-~~~~~ 245 (292)
T cd06658 175 RKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPP-------LQAMR-RIRDNLPPRVKD-SHKVS 245 (292)
T ss_pred CceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-------HHHHH-HHHhcCCCcccc-ccccC
Confidence 3445688999999999988999999999999999999999999863221 11111 111111111111 11122
Q ss_pred HHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCCC
Q 011005 445 LLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTPL 480 (496)
Q Consensus 445 ~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~~ 480 (496)
..+.+++.+||..||.+|||++|+++|+|+....+.
T Consensus 246 ~~~~~li~~~l~~~P~~Rpt~~~il~~~~~~~~~~~ 281 (292)
T cd06658 246 SVLRGFLDLMLVREPSQRATAQELLQHPFLKLAGPP 281 (292)
T ss_pred HHHHHHHHHHccCChhHCcCHHHHhhChhhhccCCc
Confidence 346788999999999999999999999999865544
No 200
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=6.9e-39 Score=308.36 Aligned_cols=258 Identities=26% Similarity=0.375 Sum_probs=200.1
Q ss_pred hCCCCcceeeecCCeeEEEEEeCC-C--cEEEEEEcccchhHHHHHHHHHHHHHHHhh-cccccccccceeecCCeEEEE
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLPN-G--KVFALKKLHTSEELAFIKSFKNEAQVLSQV-LHRNIVKLYGYCLHKKCMFLI 280 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~~-~--~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lV 280 (496)
++|++.+.||+|+||.||+|..++ + ..+++|.++........+.+.+|+.+++++ +||||+++++++......++|
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 81 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIA 81 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEE
Confidence 578899999999999999997653 3 347888887543334456789999999999 699999999999999999999
Q ss_pred EEecCCCChhhhhhCCC-------------CCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCe
Q 011005 281 YEYMERGSLFCNLHNNE-------------DAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEA 347 (496)
Q Consensus 281 ~e~~~~g~L~~~l~~~~-------------~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~ 347 (496)
+||+++|+|.+++.... ....+++..++.++.|++.||+||| +.+++||||||+||+++.++.+
T Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH---~~~ivH~dlkp~Nill~~~~~~ 158 (297)
T cd05089 82 IEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLS---EKQFIHRDLAARNVLVGENLAS 158 (297)
T ss_pred EEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCcCCcceEEECCCCeE
Confidence 99999999999987532 1125788999999999999999999 7899999999999999999999
Q ss_pred EEccccccccccCCCCCccccccccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccCCCCCCcchhHh
Q 011005 348 FVADFGTARLLHADSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSSDPKIMLID 426 (496)
Q Consensus 348 kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~ 426 (496)
||+|||++....... .......+..|+|||++.+..++.++||||||+++|||++ |..||.... .......
T Consensus 159 kl~dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~-------~~~~~~~ 230 (297)
T cd05089 159 KIADFGLSRGEEVYV-KKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMT-------CAELYEK 230 (297)
T ss_pred EECCcCCCcccccee-ccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCC-------HHHHHHH
Confidence 999999986432111 1111223457999999999899999999999999999997 999986321 1111111
Q ss_pred hhcCCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhcc
Q 011005 427 VLDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRK 477 (496)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~ 477 (496)
. .......... .....+.+++.+||+.+|.+|||++++++.+.....
T Consensus 231 ~-~~~~~~~~~~---~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~ 277 (297)
T cd05089 231 L-PQGYRMEKPR---NCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLE 277 (297)
T ss_pred H-hcCCCCCCCC---CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 1 1211111111 112347789999999999999999999888655443
No 201
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=3.3e-39 Score=309.05 Aligned_cols=268 Identities=28% Similarity=0.334 Sum_probs=207.7
Q ss_pred hCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeec--CCeEEEEE
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLH--KKCMFLIY 281 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~--~~~~~lV~ 281 (496)
++|...+.||.|++|.||+|..+ +++.+|+|.+...........+.+|++++++++||||+++++++.. .+..++||
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 80 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAM 80 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEE
Confidence 36788899999999999999774 6889999998765444455778999999999999999999998865 34789999
Q ss_pred EecCCCChhhhhhCCC-CCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccC
Q 011005 282 EYMERGSLFCNLHNNE-DAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHA 360 (496)
Q Consensus 282 e~~~~g~L~~~l~~~~-~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 360 (496)
||+++++|.+++.... ....++...+..++.|++.||.||| ..+++|+||+|+||+++.++.++|+|||++.....
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH---~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~ 157 (287)
T cd06621 81 EYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLH---SRKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVN 157 (287)
T ss_pred EecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEecCCeEEEeeccccccccc
Confidence 9999999988875422 2335788999999999999999999 78999999999999999999999999999876533
Q ss_pred CCCCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChh-
Q 011005 361 DSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRK- 439 (496)
Q Consensus 361 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 439 (496)
.. .....++..|+|||.+.+..++.++||||+|+++|+|++|+.||+..... ................+......
T Consensus 158 ~~--~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 233 (287)
T cd06621 158 SL--AGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEP--PLGPIELLSYIVNMPNPELKDEPG 233 (287)
T ss_pred cc--cccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCC--CCChHHHHHHHhcCCchhhccCCC
Confidence 22 22345788999999999999999999999999999999999999744220 01111111111111111100000
Q ss_pred -HHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCC
Q 011005 440 -VIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTP 479 (496)
Q Consensus 440 -~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~ 479 (496)
.......+.+++.+||+.+|++|||+.|+++|+|+.+...
T Consensus 234 ~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~~~~~~~~~ 274 (287)
T cd06621 234 NGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEHPWIKAQMK 274 (287)
T ss_pred CCCchHHHHHHHHHHHcCCCcccCCCHHHHHhCcccccccc
Confidence 0122345789999999999999999999999999955543
No 202
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=2.6e-39 Score=310.50 Aligned_cols=264 Identities=22% Similarity=0.305 Sum_probs=199.2
Q ss_pred hCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEe
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEY 283 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~ 283 (496)
++|++.+.||+|++|.||+|..+ +++.||+|.+...........+.+|++++++++|+||+++++++..++..++||||
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEY 84 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEec
Confidence 57889999999999999999765 68899999986543222224467899999999999999999999999999999999
Q ss_pred cCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCC
Q 011005 284 MERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSS 363 (496)
Q Consensus 284 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 363 (496)
+.+ +|.+++..... .+++..+..++.|++.||.||| +.+++||||||+||+++.++.++|+|||+++.......
T Consensus 85 ~~~-~L~~~~~~~~~--~~~~~~~~~~~~ql~~al~~lH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~ 158 (291)
T cd07844 85 LDT-DLKQYMDDCGG--GLSMHNVRLFLFQLLRGLAYCH---QRRVLHRDLKPQNLLISERGELKLADFGLARAKSVPSK 158 (291)
T ss_pred CCC-CHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHH---hCCeecccCCHHHEEEcCCCCEEECccccccccCCCCc
Confidence 985 89988875432 6788999999999999999999 78999999999999999999999999999876533222
Q ss_pred Ccccccccccccccccccc-CCcCcccchhhHHHHHHHHHhCCCCCccccccCC----------CCCCcch--hH---hh
Q 011005 364 NRTLLAGTYGYIAPELAYT-MVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSS----------SSDPKIM--LI---DV 427 (496)
Q Consensus 364 ~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~----------~~~~~~~--~~---~~ 427 (496)
......++..|+|||.+.+ ..++.++||||+|+++|+|++|+.||........ ....... .. ..
T Consensus 159 ~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (291)
T cd07844 159 TYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPEF 238 (291)
T ss_pred cccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhcccc
Confidence 2233456789999999876 4578899999999999999999999863321000 0000000 00 00
Q ss_pred hcCCCCCCCChh------HHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHH
Q 011005 428 LDQRLPPPVDRK------VIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLI 474 (496)
Q Consensus 428 ~~~~~~~~~~~~------~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~ 474 (496)
............ .......+.+++.+||+.+|++|||+.|+++|+|+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~~~f 291 (291)
T cd07844 239 KPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKHPYF 291 (291)
T ss_pred ccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence 000000000000 00001346789999999999999999999999875
No 203
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=9e-39 Score=302.76 Aligned_cols=259 Identities=21% Similarity=0.294 Sum_probs=205.2
Q ss_pred hCCCCcceeeecCCeeEEEEEe-CCCcEEEEEEcccch--hHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEE
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIY 281 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~ 281 (496)
++|++.+.||+|++|.||+|.. .+++.+|+|.+.... .......+.+|+.+++.++|+||+++++++..++..+++|
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 81 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence 4688889999999999999975 578999999886532 2334467889999999999999999999999999999999
Q ss_pred EecCCCChhhhhhCCC-CCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccC
Q 011005 282 EYMERGSLFCNLHNNE-DAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHA 360 (496)
Q Consensus 282 e~~~~g~L~~~l~~~~-~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 360 (496)
||+++++|.+++.... ....+++..++.++.|++.||.||| +.+++|+||+|+||+++.++.++|+|||++.....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd08229 82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCCEEECcchhhhcccc
Confidence 9999999999886422 2336899999999999999999999 78999999999999999999999999999877654
Q ss_pred CCCCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhH
Q 011005 361 DSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKV 440 (496)
Q Consensus 361 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 440 (496)
.........++..|+|||.+.+..++.++||||+|+++|+|++|..||..... ..............++...
T Consensus 159 ~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~--- 230 (267)
T cd08229 159 KTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM-----NLYSLCKKIEQCDYPPLPS--- 230 (267)
T ss_pred CCcccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccc-----hHHHHhhhhhcCCCCCCCc---
Confidence 43333345688899999999998999999999999999999999999853211 0011111111111111111
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHH
Q 011005 441 IRDILLISTVSFACLQSNPKSRPTMQSVSQEFLI 474 (496)
Q Consensus 441 ~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~ 474 (496)
......+.+++.+||+.||++|||+.+|++.+..
T Consensus 231 ~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~ 264 (267)
T cd08229 231 DHYSEELRQLVNMCINPDPEKRPDITYVYDVAKR 264 (267)
T ss_pred ccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhh
Confidence 1123357899999999999999999999887643
No 204
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=9.3e-39 Score=306.10 Aligned_cols=258 Identities=25% Similarity=0.418 Sum_probs=203.8
Q ss_pred hCCCCcceeeecCCeeEEEEEeC------CCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEE
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLP------NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMF 278 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 278 (496)
.+|.+.+.||+|+||.||++... ++..+|+|.+..... ...+.+.+|++++++++||||+++++++...+..+
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 83 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASD-NARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLI 83 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCH-HHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccE
Confidence 56888999999999999999642 345689998876543 33467899999999999999999999999999999
Q ss_pred EEEEecCCCChhhhhhCCC----------CCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeE
Q 011005 279 LIYEYMERGSLFCNLHNNE----------DAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAF 348 (496)
Q Consensus 279 lV~e~~~~g~L~~~l~~~~----------~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~k 348 (496)
+||||+++++|.+++.... ....+++..++.++.|++.||+||| ..+++||||||+||++++++.++
T Consensus 84 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH---~~~i~H~dlkp~Nili~~~~~~k 160 (288)
T cd05093 84 MVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLA---SQHFVHRDLATRNCLVGENLLVK 160 (288)
T ss_pred EEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccCcceEEEccCCcEE
Confidence 9999999999999987432 1224899999999999999999999 78999999999999999999999
Q ss_pred EccccccccccCCCCC--ccccccccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccCCCCCCcchhH
Q 011005 349 VADFGTARLLHADSSN--RTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSSDPKIMLI 425 (496)
Q Consensus 349 l~Dfg~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~ 425 (496)
|+|||+++........ .....++..|+|||++.+..++.++||||||+++|+|++ |..||.... ......
T Consensus 161 l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~-------~~~~~~ 233 (288)
T cd05093 161 IGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLS-------NNEVIE 233 (288)
T ss_pred eccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC-------HHHHHH
Confidence 9999999765432211 122335678999999999999999999999999999998 899986322 111122
Q ss_pred hhhcCCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhcc
Q 011005 426 DVLDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRK 477 (496)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~ 477 (496)
............ .....+.+++.+||+.||.+|||+.|+++.+....+
T Consensus 234 ~i~~~~~~~~~~----~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~ 281 (288)
T cd05093 234 CITQGRVLQRPR----TCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAK 281 (288)
T ss_pred HHHcCCcCCCCC----CCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHH
Confidence 222222111111 112347899999999999999999999888766543
No 205
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=1.1e-38 Score=303.86 Aligned_cols=255 Identities=30% Similarity=0.450 Sum_probs=207.5
Q ss_pred hCCCCcceeeecCCeeEEEEEe-CCCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEe
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEY 283 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~ 283 (496)
+-|+..+.||+|+||.||+|.. .+++.||+|.+.........+.+.+|+.++++++||||+++++++..+...++||||
T Consensus 4 ~~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 83 (277)
T cd06641 4 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEY 83 (277)
T ss_pred HhhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEe
Confidence 3477788999999999999965 468899999886554444456788999999999999999999999999999999999
Q ss_pred cCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCC
Q 011005 284 MERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSS 363 (496)
Q Consensus 284 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 363 (496)
+++++|.+++... .+++..+..++.|++.|+.+|| ..+++|+||+|+||+++.++.++|+|||++........
T Consensus 84 ~~~~~l~~~i~~~----~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~ 156 (277)
T cd06641 84 LGGGSALDLLEPG----PLDETQIATILREILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI 156 (277)
T ss_pred CCCCcHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHc---cCCeecCCCCHHhEEECCCCCEEEeecccceecccchh
Confidence 9999999988643 5789999999999999999999 78999999999999999999999999999876644333
Q ss_pred CccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHHHH
Q 011005 364 NRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVIRD 443 (496)
Q Consensus 364 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 443 (496)
......++..|+|||.+.+..++.++|+||+|+++|+|++|..||..... . .....+.....+.... ..
T Consensus 157 ~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~-------~-~~~~~~~~~~~~~~~~---~~ 225 (277)
T cd06641 157 KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHP-------M-KVLFLIPKNNPPTLEG---NY 225 (277)
T ss_pred hhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccch-------H-HHHHHHhcCCCCCCCc---cc
Confidence 33345678899999999888889999999999999999999999863221 1 1111111111111111 11
Q ss_pred HHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhcc
Q 011005 444 ILLISTVSFACLQSNPKSRPTMQSVSQEFLITRK 477 (496)
Q Consensus 444 ~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~ 477 (496)
...+.+++.+||+.+|++||++.++++|+|+.+.
T Consensus 226 ~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~~~~ 259 (277)
T cd06641 226 SKPLKEFVEACLNKEPSFRPTAKELLKHKFIVRF 259 (277)
T ss_pred CHHHHHHHHHHccCChhhCcCHHHHHhCHHHhhh
Confidence 2346789999999999999999999999999875
No 206
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=4.1e-39 Score=307.86 Aligned_cols=255 Identities=24% Similarity=0.351 Sum_probs=200.3
Q ss_pred hCCCCcceeeecCCeeEEEEEeC------CCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEE
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLP------NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMF 278 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 278 (496)
.+|.+.+.||+|+||.||+|... .++.||+|++...........+.+|+.+++.++||||+++++++......+
T Consensus 5 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~ 84 (283)
T cd05091 5 STVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLS 84 (283)
T ss_pred HHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceE
Confidence 34777888999999999999753 357899999986554444567889999999999999999999999999999
Q ss_pred EEEEecCCCChhhhhhCCC-------------CCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCC
Q 011005 279 LIYEYMERGSLFCNLHNNE-------------DAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKL 345 (496)
Q Consensus 279 lV~e~~~~g~L~~~l~~~~-------------~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~ 345 (496)
+++||+.+++|.+++.... ....+++..+..++.|++.||+|+| +++++||||||+||++++++
T Consensus 85 ~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH---~~gi~H~dlkp~Nil~~~~~ 161 (283)
T cd05091 85 MIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLS---SHHVVHKDLATRNVLVFDKL 161 (283)
T ss_pred EEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHH---HcCccccccchhheEecCCC
Confidence 9999999999999885321 1224788889999999999999999 78999999999999999999
Q ss_pred CeEEccccccccccCCCCC--ccccccccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccCCCCCCcc
Q 011005 346 EAFVADFGTARLLHADSSN--RTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSSDPKI 422 (496)
Q Consensus 346 ~~kl~Dfg~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~~~~~ 422 (496)
.+||+|||+++........ .....+++.|+|||.+.+..++.++||||+|+++|||++ |..||.... ...
T Consensus 162 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~-------~~~ 234 (283)
T cd05091 162 NVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYS-------NQD 234 (283)
T ss_pred ceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCC-------HHH
Confidence 9999999998765432211 122345678999999998889999999999999999998 888875321 111
Q ss_pred hhHhhhcCCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHH
Q 011005 423 MLIDVLDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFL 473 (496)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~ 473 (496)
............ ... .....+.+++.+||+.+|++||++.++++.+.
T Consensus 235 ~~~~i~~~~~~~-~~~---~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~ 281 (283)
T cd05091 235 VIEMIRNRQVLP-CPD---DCPAWVYTLMLECWNEFPSRRPRFKDIHSRLR 281 (283)
T ss_pred HHHHHHcCCcCC-CCC---CCCHHHHHHHHHHhCCCcccCCCHHHHHHHhh
Confidence 222222222211 111 12234778999999999999999999998763
No 207
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=6.3e-39 Score=318.75 Aligned_cols=259 Identities=23% Similarity=0.363 Sum_probs=203.1
Q ss_pred HHhCCCCcceeeecCCeeEEEEEeC------CCcEEEEEEcccchhHHHHHHHHHHHHHHHhhc-ccccccccceeecCC
Q 011005 203 ATEDFDIRYCIGTGGYGSVYKAQLP------NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVL-HRNIVKLYGYCLHKK 275 (496)
Q Consensus 203 ~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~ 275 (496)
..++|.+.+.||+|+||.||+|.+. .++.||+|++.........+.+.+|++++.++. ||||+++++++...+
T Consensus 35 ~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~ 114 (401)
T cd05107 35 PRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGG 114 (401)
T ss_pred cHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCC
Confidence 3456888899999999999999753 346899999986544444457889999999997 999999999999999
Q ss_pred eEEEEEEecCCCChhhhhhCCCC---------------------------------------------------------
Q 011005 276 CMFLIYEYMERGSLFCNLHNNED--------------------------------------------------------- 298 (496)
Q Consensus 276 ~~~lV~e~~~~g~L~~~l~~~~~--------------------------------------------------------- 298 (496)
..++||||+++|+|.++++....
T Consensus 115 ~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (401)
T cd05107 115 PIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQD 194 (401)
T ss_pred CcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchhc
Confidence 99999999999999999875321
Q ss_pred --------------------------------------CccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceE
Q 011005 299 --------------------------------------AVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNIL 340 (496)
Q Consensus 299 --------------------------------------~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil 340 (496)
...+++..++.++.|++.||+||| ..+++||||||+||+
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrdlkp~NiL 271 (401)
T cd05107 195 MKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLA---SKNCVHRDLAARNVL 271 (401)
T ss_pred chhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHh---cCCcCcccCCcceEE
Confidence 123677788999999999999999 789999999999999
Q ss_pred ecCCCCeEEccccccccccCCCC--CccccccccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccCCC
Q 011005 341 LNSKLEAFVADFGTARLLHADSS--NRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSS 417 (496)
Q Consensus 341 ~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~ 417 (496)
+++++.++|+|||+++....... ......+++.|+|||.+.+..++.++||||||+++|||++ |..||....
T Consensus 272 l~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~----- 346 (401)
T cd05107 272 ICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELP----- 346 (401)
T ss_pred EeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCC-----
Confidence 99999999999999986533221 1222356788999999999889999999999999999998 889985321
Q ss_pred CCCcchhHhhhcCCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHH
Q 011005 418 SDPKIMLIDVLDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLI 474 (496)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~ 474 (496)
........+.......... .....+.+++.+||..+|++||+++|+++.+..
T Consensus 347 --~~~~~~~~~~~~~~~~~p~---~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~ 398 (401)
T cd05107 347 --MNEQFYNAIKRGYRMAKPA---HASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGD 398 (401)
T ss_pred --chHHHHHHHHcCCCCCCCC---CCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence 1111122222211111111 112357889999999999999999999998754
No 208
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=9.7e-39 Score=306.45 Aligned_cols=259 Identities=25% Similarity=0.411 Sum_probs=205.6
Q ss_pred hCCCCcceeeecCCeeEEEEEeC------CCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEE
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLP------NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMF 278 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 278 (496)
.+|.+.+.||+|+||.||+|... ++..+++|.+..... ...+.+.+|+.++++++|+||+++++++...+..+
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 83 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTL-AARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLI 83 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccH-HHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceE
Confidence 45888899999999999999642 355688898865443 23466889999999999999999999999999999
Q ss_pred EEEEecCCCChhhhhhCCCC-------------CccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCC
Q 011005 279 LIYEYMERGSLFCNLHNNED-------------AVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKL 345 (496)
Q Consensus 279 lV~e~~~~g~L~~~l~~~~~-------------~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~ 345 (496)
+||||+++++|.+++..... ...+++..++.++.||+.|++||| .++++||||||+||+++.++
T Consensus 84 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH---~~~i~H~dlkp~Nil~~~~~ 160 (291)
T cd05094 84 MVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLA---SQHFVHRDLATRNCLVGANL 160 (291)
T ss_pred EEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccCcceEEEccCC
Confidence 99999999999999875421 235899999999999999999999 78999999999999999999
Q ss_pred CeEEccccccccccCCCC--CccccccccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccCCCCCCcc
Q 011005 346 EAFVADFGTARLLHADSS--NRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSSDPKI 422 (496)
Q Consensus 346 ~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~~~~~ 422 (496)
.++|+|||++........ ......++..|+|||++.+..++.++||||||+++|||++ |+.||..... ..
T Consensus 161 ~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~-------~~ 233 (291)
T cd05094 161 LVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSN-------TE 233 (291)
T ss_pred cEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH-------HH
Confidence 999999999976543221 1223456788999999999999999999999999999999 9999853221 11
Q ss_pred hhHhhhcCCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccC
Q 011005 423 MLIDVLDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKT 478 (496)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~ 478 (496)
.............. ...+..+.+++.+||+.||++|||+.++++.+....+.
T Consensus 234 ~~~~~~~~~~~~~~----~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~~ 285 (291)
T cd05094 234 VIECITQGRVLERP----RVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGKA 285 (291)
T ss_pred HHHHHhCCCCCCCC----ccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHhh
Confidence 11112222221111 11223577999999999999999999999999877553
No 209
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=3e-39 Score=339.90 Aligned_cols=266 Identities=23% Similarity=0.350 Sum_probs=204.9
Q ss_pred HHhCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccch-hHHHHHHHHHHHHHHHhhcccccccccceeec--CCeEE
Q 011005 203 ATEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSE-ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLH--KKCMF 278 (496)
Q Consensus 203 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~--~~~~~ 278 (496)
..++|.+.+.||+|+||+||+|.+. .+..||+|.+.... .......+..|+.+++.++||||++++++|.. ...++
T Consensus 11 ~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~ly 90 (1021)
T PTZ00266 11 RLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKLY 90 (1021)
T ss_pred ccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEEE
Confidence 4578999999999999999999765 57788999886532 23345678899999999999999999998854 45789
Q ss_pred EEEEecCCCChhhhhhCCC-CCccCCHHHHHHHHHHHHHHHHHHHhCC----CCCeEEeCCCCCceEecC----------
Q 011005 279 LIYEYMERGSLFCNLHNNE-DAVELDWAKRVNIVKAMAHALAYLHHDC----SPSIIHRDISSNNILLNS---------- 343 (496)
Q Consensus 279 lV~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~i~~~i~~~l~~lh~~~----~~~i~H~dlkp~Nil~~~---------- 343 (496)
+||||+++|+|.+++.... ....+++..++.|+.||+.||+|||+.. ..+|+||||||+|||++.
T Consensus 91 IVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~ 170 (1021)
T PTZ00266 91 ILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITA 170 (1021)
T ss_pred EEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccccc
Confidence 9999999999999987532 2236899999999999999999999531 146999999999999964
Q ss_pred -------CCCeEEccccccccccCCCCCcccccccccccccccccc--CCcCcccchhhHHHHHHHHHhCCCCCcccccc
Q 011005 344 -------KLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYT--MVMTEKCDVYSFGVVTLEVLMGKHPRDILSSL 414 (496)
Q Consensus 344 -------~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwslG~il~el~~g~~p~~~~~~~ 414 (496)
.+.+||+|||++..+.... ......||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.....
T Consensus 171 ~~~n~ng~~iVKLsDFGlAr~l~~~s-~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~- 248 (1021)
T PTZ00266 171 QANNLNGRPIAKIGDFGLSKNIGIES-MAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKANN- 248 (1021)
T ss_pred cccccCCCCceEEccCCccccccccc-cccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCCc-
Confidence 2348999999998664332 2234578999999999864 4588999999999999999999999963221
Q ss_pred CCCCCCcchhHhhhcCCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCCC
Q 011005 415 SSSSDPKIMLIDVLDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTPL 480 (496)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~~ 480 (496)
.......+......+.. .....+.+|+..||+.+|++||++.|++++.|+....+.
T Consensus 249 ------~~qli~~lk~~p~lpi~----~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h~~ik~i~~p 304 (1021)
T PTZ00266 249 ------FSQLISELKRGPDLPIK----GKSKELNILIKNLLNLSAKERPSALQCLGYQIIKNVGPP 304 (1021)
T ss_pred ------HHHHHHHHhcCCCCCcC----CCCHHHHHHHHHHhcCChhHCcCHHHHhccHHHhhcCCC
Confidence 11111122111111111 112347789999999999999999999999999765443
No 210
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=8.9e-39 Score=306.83 Aligned_cols=265 Identities=25% Similarity=0.371 Sum_probs=213.1
Q ss_pred HhCCCCcceeeecCCeeEEEEEe-CCCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEE
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYE 282 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e 282 (496)
.++|.+.+.||+|+||.||+|.. .+++.||+|.+...... ..+.+.+|+.+++.++|||++++++++...+..++|+|
T Consensus 18 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~-~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e 96 (293)
T cd06647 18 KKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQP-KKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVME 96 (293)
T ss_pred hhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccch-HHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEe
Confidence 36799999999999999999965 46789999998654322 23567899999999999999999999999999999999
Q ss_pred ecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCC
Q 011005 283 YMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADS 362 (496)
Q Consensus 283 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 362 (496)
|+++++|.+++.+. .+++..+..++.|++.|+.||| +.+++|+||+|+||+++.++.++|+|||++.......
T Consensus 97 ~~~~~~L~~~~~~~----~l~~~~~~~i~~~l~~al~~LH---~~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~ 169 (293)
T cd06647 97 YLAGGSLTDVVTET----CMDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ 169 (293)
T ss_pred cCCCCcHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHH---hCCEeeccCCHHHEEEcCCCCEEEccCcceecccccc
Confidence 99999999998753 4788899999999999999999 7899999999999999999999999999987665444
Q ss_pred CCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHHH
Q 011005 363 SNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVIR 442 (496)
Q Consensus 363 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (496)
.......+++.|+|||.+.+..++.++||||||+++|++++|+.||....... ..........+ .. .....
T Consensus 170 ~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~-------~~~~~~~~~~~-~~-~~~~~ 240 (293)
T cd06647 170 SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLR-------ALYLIATNGTP-EL-QNPEK 240 (293)
T ss_pred cccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhh-------heeehhcCCCC-CC-CCccc
Confidence 33444568889999999988889999999999999999999999996432210 00000000000 00 01111
Q ss_pred HHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCCCCCccc
Q 011005 443 DILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTPLVKHAA 485 (496)
Q Consensus 443 ~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~~~~~~~ 485 (496)
....+.+++.+||+.+|++||++.++++|.|+....+..+-+.
T Consensus 241 ~~~~l~~li~~~l~~~p~~Rp~~~~il~h~~~~~~~~~~~~~~ 283 (293)
T cd06647 241 LSAIFRDFLNRCLEMDVEKRGSAKELLQHPFLKIAKPLSSLTP 283 (293)
T ss_pred cCHHHHHHHHHHccCChhhCcCHHHHhcCHHHhcCcccccccc
Confidence 2234778999999999999999999999999998887765543
No 211
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=8.4e-39 Score=302.95 Aligned_cols=252 Identities=27% Similarity=0.425 Sum_probs=202.2
Q ss_pred CCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccch--------hHHHHHHHHHHHHHHHhhcccccccccceeecCCe
Q 011005 206 DFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSE--------ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKC 276 (496)
Q Consensus 206 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--------~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 276 (496)
+|.+...||+|++|.||+|... +++.||+|.+.... .....+.+.+|+.++++++||||+++++++...+.
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 80 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADH 80 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCc
Confidence 4778889999999999999754 68899999886432 11233567899999999999999999999999999
Q ss_pred EEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccc
Q 011005 277 MFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTAR 356 (496)
Q Consensus 277 ~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~ 356 (496)
.++||||+++++|.+++.... .++...+..++.|++.||+||| +.+++||||+|+||++++++.++|+|||.++
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~~l~~~l~~lH---~~~ivH~di~p~nil~~~~~~~~l~dfg~~~ 154 (267)
T cd06628 81 LNIFLEYVPGGSVAALLNNYG---AFEETLVRNFVRQILKGLNYLH---NRGIIHRDIKGANILVDNKGGIKISDFGISK 154 (267)
T ss_pred cEEEEEecCCCCHHHHHHhcc---CccHHHHHHHHHHHHHHHHHHH---hcCcccccCCHHHEEEcCCCCEEecccCCCc
Confidence 999999999999999997643 5788899999999999999999 7799999999999999999999999999998
Q ss_pred cccCCCC------CccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcC
Q 011005 357 LLHADSS------NRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQ 430 (496)
Q Consensus 357 ~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 430 (496)
....... ......++..|+|||.+.+..++.++|+||+|+++|+|++|+.||..... ..........
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~-------~~~~~~~~~~ 227 (267)
T cd06628 155 KLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQ-------LQAIFKIGEN 227 (267)
T ss_pred ccccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccH-------HHHHHHHhcc
Confidence 7653211 11223578899999999998999999999999999999999999963221 1111111111
Q ss_pred CCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHH
Q 011005 431 RLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLI 474 (496)
Q Consensus 431 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~ 474 (496)
..+. .. ......+.+++.+||+.||.+||++.|+++++|+
T Consensus 228 ~~~~-~~---~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~ 267 (267)
T cd06628 228 ASPE-IP---SNISSEAIDFLEKTFEIDHNKRPTAAELLKHPFL 267 (267)
T ss_pred CCCc-CC---cccCHHHHHHHHHHccCCchhCcCHHHHhhCCCC
Confidence 1111 11 1122357789999999999999999999999874
No 212
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=9.4e-39 Score=306.41 Aligned_cols=256 Identities=25% Similarity=0.405 Sum_probs=201.6
Q ss_pred CCCCcceeeecCCeeEEEEEeC------CCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEE
Q 011005 206 DFDIRYCIGTGGYGSVYKAQLP------NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFL 279 (496)
Q Consensus 206 ~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 279 (496)
+|++.+.||+|+||.||+|... ....+++|.+...........+.+|+.+++.++||||+++++.+...+..++
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 80 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLL 80 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEE
Confidence 4778899999999999999653 2357889988765544445778999999999999999999999999999999
Q ss_pred EEEecCCCChhhhhhCCC---------------------CCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCc
Q 011005 280 IYEYMERGSLFCNLHNNE---------------------DAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNN 338 (496)
Q Consensus 280 V~e~~~~g~L~~~l~~~~---------------------~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~N 338 (496)
|+||+.+|+|.+++.... ....+++..++.++.|++.||.||| +.+++||||||+|
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH---~~~ivH~dikp~n 157 (290)
T cd05045 81 IVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLA---EMKLVHRDLAARN 157 (290)
T ss_pred EEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHH---HCCeehhhhhhhe
Confidence 999999999999876421 1124788999999999999999999 7899999999999
Q ss_pred eEecCCCCeEEccccccccccCCCC--CccccccccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccC
Q 011005 339 ILLNSKLEAFVADFGTARLLHADSS--NRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLS 415 (496)
Q Consensus 339 il~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~ 415 (496)
|++++++.++|+|||+++....... ......++..|+|||.+.+..++.++||||||+++|||++ |..||....
T Consensus 158 ill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~--- 234 (290)
T cd05045 158 VLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIA--- 234 (290)
T ss_pred EEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCC---
Confidence 9999999999999999976533221 1122345678999999998899999999999999999998 999985321
Q ss_pred CCCCCcchhHhhhcCCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHh
Q 011005 416 SSSDPKIMLIDVLDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLIT 475 (496)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~ 475 (496)
.....+........+... .....+.+++.+||+.+|++||+++|+++.+...
T Consensus 235 -----~~~~~~~~~~~~~~~~~~---~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~ 286 (290)
T cd05045 235 -----PERLFNLLKTGYRMERPE---NCSEEMYNLMLTCWKQEPDKRPTFADISKELEKM 286 (290)
T ss_pred -----HHHHHHHHhCCCCCCCCC---CCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHH
Confidence 112222222221111111 1123477899999999999999999999987643
No 213
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=1e-38 Score=301.15 Aligned_cols=252 Identities=27% Similarity=0.457 Sum_probs=200.8
Q ss_pred HhCCCCcceeeecCCeeEEEEEeCCCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEe
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEY 283 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~ 283 (496)
.++|++.+.||+|+||.||+|..+++..+|+|.+...... .+.+.+|+.++++++|+|++++++++.. ...++||||
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~~--~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~~~lv~e~ 81 (260)
T cd05070 5 RESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTMS--PESFLEEAQIMKKLRHDKLVQLYAVVSE-EPIYIVTEY 81 (260)
T ss_pred hHHhhhhheeccccCceEEEEEecCCceeEEEEecCCCCC--HHHHHHHHHHHHhcCCCceEEEEeEECC-CCcEEEEEe
Confidence 3578999999999999999999888889999998764322 2568899999999999999999998854 457899999
Q ss_pred cCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCC
Q 011005 284 MERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSS 363 (496)
Q Consensus 284 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 363 (496)
+++++|.+++.... ...+++..+..++.|++.||.||| +.+++||||||+||++++++.++|+|||++........
T Consensus 82 ~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~al~~lH---~~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~ 157 (260)
T cd05070 82 MSKGSLLDFLKDGE-GRALKLPNLVDMAAQVAAGMAYIE---RMNYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEY 157 (260)
T ss_pred cCCCcHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCccceEEEeCCceEEeCCceeeeeccCccc
Confidence 99999999987643 235799999999999999999999 77999999999999999999999999999987643322
Q ss_pred C-ccccccccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHH
Q 011005 364 N-RTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVI 441 (496)
Q Consensus 364 ~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (496)
. .....++..|+|||.+.+..++.++||||||+++|+|++ |..||.... .. ...+.+......+...
T Consensus 158 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~-------~~-~~~~~~~~~~~~~~~~--- 226 (260)
T cd05070 158 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMN-------NR-EVLEQVERGYRMPCPQ--- 226 (260)
T ss_pred ccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCC-------HH-HHHHHHHcCCCCCCCC---
Confidence 1 112234567999999998899999999999999999999 899986321 11 1222222221211111
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCHHHHHHHHH
Q 011005 442 RDILLISTVSFACLQSNPKSRPTMQSVSQEFL 473 (496)
Q Consensus 442 ~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~ 473 (496)
.....+.+++.+|+..+|++|||+.++.+.+.
T Consensus 227 ~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~ 258 (260)
T cd05070 227 DCPISLHELMLQCWKKDPEERPTFEYLQSFLE 258 (260)
T ss_pred cCCHHHHHHHHHHcccCcccCcCHHHHHHHHh
Confidence 12235789999999999999999999988764
No 214
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=5.1e-39 Score=336.90 Aligned_cols=256 Identities=26% Similarity=0.401 Sum_probs=198.3
Q ss_pred hCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccch--hHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEE
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIY 281 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~ 281 (496)
++|++.+.||+|+||.||+|... +++.||+|++.... .....+.+.+|++++++++||||+++++++.+++..++||
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM 81 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM 81 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence 57899999999999999999765 58999999987532 2334467899999999999999999999999999999999
Q ss_pred EecCCCChhhhhhCCC--------CCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEcccc
Q 011005 282 EYMERGSLFCNLHNNE--------DAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFG 353 (496)
Q Consensus 282 e~~~~g~L~~~l~~~~--------~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg 353 (496)
||++||+|.+++.... .....++..++.++.||+.||+||| +.+|+||||||+||+++.++.++|+|||
T Consensus 82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLH---s~GIIHRDLKPeNILLd~dg~vKLiDFG 158 (932)
T PRK13184 82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVH---SKGVLHRDLKPDNILLGLFGEVVILDWG 158 (932)
T ss_pred EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHH---HCCccccCCchheEEEcCCCCEEEEecC
Confidence 9999999999886421 1224567788999999999999999 7799999999999999999999999999
Q ss_pred ccccccCCCC------------------CccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccC
Q 011005 354 TARLLHADSS------------------NRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLS 415 (496)
Q Consensus 354 ~~~~~~~~~~------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~ 415 (496)
+++....... .....+||+.|+|||++.+..++.++||||+||++|||++|+.||......
T Consensus 159 LAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~- 237 (932)
T PRK13184 159 AAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGR- 237 (932)
T ss_pred cceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchh-
Confidence 9986621110 011246899999999999999999999999999999999999999642110
Q ss_pred CCCCCcchhHhhhcCCCCCCCC-hhHHHHHHHHHHHHHhcccCCCCCCCC-HHHHHHHHH
Q 011005 416 SSSDPKIMLIDVLDQRLPPPVD-RKVIRDILLISTVSFACLQSNPKSRPT-MQSVSQEFL 473 (496)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~dP~~Rps-~~evl~~~~ 473 (496)
..... .....+.. ......+..+.+++.+|++.||++||+ ++++++.+.
T Consensus 238 -----ki~~~----~~i~~P~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le 288 (932)
T PRK13184 238 -----KISYR----DVILSPIEVAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLE 288 (932)
T ss_pred -----hhhhh----hhccChhhccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 00001 11110000 001112234778999999999999975 555555443
No 215
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=3.9e-39 Score=310.88 Aligned_cols=257 Identities=25% Similarity=0.380 Sum_probs=199.7
Q ss_pred HhCCCCcceeeecCCeeEEEEEeC-CCc--EEEEEEcccchhHHHHHHHHHHHHHHHhh-cccccccccceeecCCeEEE
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLP-NGK--VFALKKLHTSEELAFIKSFKNEAQVLSQV-LHRNIVKLYGYCLHKKCMFL 279 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~--~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~l 279 (496)
.++|++.+.||+|+||.||+|.++ ++. .+++|.+...........+.+|++++.++ +|+||+++++++...+..++
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~l 85 (303)
T cd05088 6 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL 85 (303)
T ss_pred hhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceE
Confidence 357889999999999999999764 444 46777776543344456788999999999 89999999999999999999
Q ss_pred EEEecCCCChhhhhhCCC-------------CCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCC
Q 011005 280 IYEYMERGSLFCNLHNNE-------------DAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLE 346 (496)
Q Consensus 280 V~e~~~~g~L~~~l~~~~-------------~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~ 346 (496)
||||+++|+|.+++.... ....+++.+++.++.|++.|++||| +.+++||||||+||+++.++.
T Consensus 86 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH---~~gi~H~dlkp~Nili~~~~~ 162 (303)
T cd05088 86 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYV 162 (303)
T ss_pred EEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHH---hCCccccccchheEEecCCCc
Confidence 999999999999987542 1235789999999999999999999 789999999999999999999
Q ss_pred eEEccccccccccCCCCCccccccccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccCCCCCCcchhH
Q 011005 347 AFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSSDPKIMLI 425 (496)
Q Consensus 347 ~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~ 425 (496)
++|+|||++...... .......++..|+|||++.+..++.++||||||+++|||+| |..||..... ... .
T Consensus 163 ~kl~dfg~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~-------~~~-~ 233 (303)
T cd05088 163 AKIADFGLSRGQEVY-VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC-------AEL-Y 233 (303)
T ss_pred EEeCccccCcccchh-hhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCCh-------HHH-H
Confidence 999999998643211 11112234567999999988889999999999999999998 9999853211 111 1
Q ss_pred hhhcCCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHh
Q 011005 426 DVLDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLIT 475 (496)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~ 475 (496)
+............ .....+.+++.+||+.+|++||+++++++.+...
T Consensus 234 ~~~~~~~~~~~~~---~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~ 280 (303)
T cd05088 234 EKLPQGYRLEKPL---NCDDEVYDLMRQCWREKPYERPSFAQILVSLNRM 280 (303)
T ss_pred HHHhcCCcCCCCC---CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 1111111111111 1123467899999999999999999999987654
No 216
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1e-39 Score=317.67 Aligned_cols=253 Identities=25% Similarity=0.393 Sum_probs=207.2
Q ss_pred eeeecCCeeEEEEEeCC-CcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEecCCCChh
Q 011005 212 CIGTGGYGSVYKAQLPN-GKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEYMERGSLF 290 (496)
Q Consensus 212 ~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~~~~g~L~ 290 (496)
.||+|.||+||-|++.+ ...+|||-+....+ .+.+.+.+|+.+.++++|.|||+++|.+.+++..-+.||-.+||+|.
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekds-r~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLS 660 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDS-REVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLS 660 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeecccccc-hhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHH
Confidence 59999999999997654 55789999877654 34577899999999999999999999999999999999999999999
Q ss_pred hhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEec-CCCCeEEccccccccccCCCCCccccc
Q 011005 291 CNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLN-SKLEAFVADFGTARLLHADSSNRTLLA 369 (496)
Q Consensus 291 ~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~-~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 369 (496)
+++...=..-.-++.++-.+.+||++||.||| ...|||||||-+|||++ -.|.+||+|||-++++..-.....++.
T Consensus 661 sLLrskWGPlKDNEstm~fYtkQILeGLkYLH---en~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP~TETFT 737 (1226)
T KOG4279|consen 661 SLLRSKWGPLKDNESTMNFYTKQILEGLKYLH---ENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINPCTETFT 737 (1226)
T ss_pred HHHHhccCCCccchhHHHHHHHHHHHHhhhhh---hcceeeccccCCcEEEeeccceEEecccccchhhccCCccccccc
Confidence 99976432223367777789999999999999 77999999999999995 579999999999999877777777889
Q ss_pred cccccccccccccC--CcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHHHHHHHH
Q 011005 370 GTYGYIAPELAYTM--VMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVIRDILLI 447 (496)
Q Consensus 370 gt~~y~aPE~~~~~--~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 447 (496)
||..|||||++..+ .|..++|||||||++.||.||++||-.+... ......+=-.+..++... ......
T Consensus 738 GTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~Elgsp------qAAMFkVGmyKvHP~iPe---elsaea 808 (1226)
T KOG4279|consen 738 GTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSP------QAAMFKVGMYKVHPPIPE---ELSAEA 808 (1226)
T ss_pred cchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCCh------hHhhhhhcceecCCCCcH---HHHHHH
Confidence 99999999999865 5888999999999999999999999654321 111111111222333322 222346
Q ss_pred HHHHHhcccCCCCCCCCHHHHHHHHHHhcc
Q 011005 448 STVSFACLQSNPKSRPTMQSVSQEFLITRK 477 (496)
Q Consensus 448 ~~li~~cl~~dP~~Rps~~evl~~~~~~~~ 477 (496)
..++.+|+.+||.+||++.++++.+|....
T Consensus 809 k~FilrcFepd~~~R~sA~~LL~DpFlq~~ 838 (1226)
T KOG4279|consen 809 KNFILRCFEPDPCDRPSAKDLLQDPFLQHN 838 (1226)
T ss_pred HHHHHHHcCCCcccCccHHHhccCcccccC
Confidence 789999999999999999999999998766
No 217
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=7.2e-39 Score=307.18 Aligned_cols=251 Identities=26% Similarity=0.390 Sum_probs=207.0
Q ss_pred hCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccch--hHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEE
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIY 281 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~ 281 (496)
++|++.+.||+|+||.||++... +++.||+|.+.... .....+.+.+|++++++++||||+++++++..+...++||
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 80 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM 80 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence 46889999999999999999764 68999999987543 2233466889999999999999999999999999999999
Q ss_pred EecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCC
Q 011005 282 EYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHAD 361 (496)
Q Consensus 282 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 361 (496)
||+++++|.+++.... .++...+..++.|++.||.||| +.+++|+||+|+||+++.++.++|+|||++......
T Consensus 81 e~~~~~~L~~~~~~~~---~l~~~~~~~~~~qil~~l~~lH---~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~ 154 (290)
T cd05580 81 EYVPGGELFSHLRKSG---RFPEPVARFYAAQVVLALEYLH---SLDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR 154 (290)
T ss_pred ecCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEECCCCCEEEeeCCCccccCCC
Confidence 9999999999987653 6889999999999999999999 789999999999999999999999999999876433
Q ss_pred CCCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHH
Q 011005 362 SSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVI 441 (496)
Q Consensus 362 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (496)
.....+++.|+|||.+.+...+.++||||||+++|+|++|+.||.... ...............+..
T Consensus 155 ---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-------~~~~~~~~~~~~~~~~~~---- 220 (290)
T cd05580 155 ---TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDN-------PIQIYEKILEGKVRFPSF---- 220 (290)
T ss_pred ---CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCC-------HHHHHHHHhcCCccCCcc----
Confidence 234468899999999988888999999999999999999999986322 111222222222221111
Q ss_pred HHHHHHHHHHHhcccCCCCCCC-----CHHHHHHHHHHhc
Q 011005 442 RDILLISTVSFACLQSNPKSRP-----TMQSVSQEFLITR 476 (496)
Q Consensus 442 ~~~~~l~~li~~cl~~dP~~Rp-----s~~evl~~~~~~~ 476 (496)
....+.+++.+||..||.+|+ +++|+++|+|+..
T Consensus 221 -~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~ 259 (290)
T cd05580 221 -FSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNHPWFAG 259 (290)
T ss_pred -CCHHHHHHHHHHccCCHHHccCcccCCHHHHHcCccccc
Confidence 123567899999999999999 8999999998744
No 218
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=1.9e-38 Score=297.51 Aligned_cols=245 Identities=24% Similarity=0.381 Sum_probs=196.1
Q ss_pred eeeecCCeeEEEEEeCCCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEecCCCChhh
Q 011005 212 CIGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEYMERGSLFC 291 (496)
Q Consensus 212 ~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~~~~g~L~~ 291 (496)
.||+|+||.||+|..++++.+|+|.+...........+.+|++++++++||||+++++++......++||||+++++|.+
T Consensus 2 ~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~ 81 (250)
T cd05085 2 LLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFLS 81 (250)
T ss_pred ccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHHH
Confidence 58999999999999888999999998765444444568899999999999999999999999999999999999999999
Q ss_pred hhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCCCc-ccccc
Q 011005 292 NLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNR-TLLAG 370 (496)
Q Consensus 292 ~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~-~~~~g 370 (496)
++.... ..+++..+..++.|++.||.|+| ..+++||||+|+||+++.++.++++|||++.......... ....+
T Consensus 82 ~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH---~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~ 156 (250)
T cd05085 82 FLRKKK--DELKTKQLVKFALDAAAGMAYLE---SKNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLKQI 156 (250)
T ss_pred HHHhcC--CCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccChheEEEcCCCeEEECCCccceeccccccccCCCCCC
Confidence 887543 25789999999999999999999 7899999999999999999999999999987543222111 12234
Q ss_pred ccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHHHHHHHHHH
Q 011005 371 TYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVIRDILLIST 449 (496)
Q Consensus 371 t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 449 (496)
+..|+|||++.+..++.++||||||+++|++++ |..||..... ...... ........... .....+.+
T Consensus 157 ~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~-------~~~~~~-~~~~~~~~~~~---~~~~~~~~ 225 (250)
T cd05085 157 PIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTN-------QQAREQ-VEKGYRMSCPQ---KCPDDVYK 225 (250)
T ss_pred cccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCH-------HHHHHH-HHcCCCCCCCC---CCCHHHHH
Confidence 567999999998899999999999999999998 9999863221 111111 11111111101 11235788
Q ss_pred HHHhcccCCCCCCCCHHHHHHHH
Q 011005 450 VSFACLQSNPKSRPTMQSVSQEF 472 (496)
Q Consensus 450 li~~cl~~dP~~Rps~~evl~~~ 472 (496)
++.+||+.+|++||++.|+++.+
T Consensus 226 li~~~l~~~p~~Rp~~~~l~~~l 248 (250)
T cd05085 226 VMQRCWDYKPENRPKFSELQKEL 248 (250)
T ss_pred HHHHHcccCcccCCCHHHHHHHh
Confidence 99999999999999999999875
No 219
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=1e-38 Score=301.47 Aligned_cols=252 Identities=26% Similarity=0.403 Sum_probs=199.7
Q ss_pred HhCCCCcceeeecCCeeEEEEEeCCCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEe
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEY 283 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~ 283 (496)
.++|++.+.||+|+||+||+|.++++..||+|++..... ....+.+|++++++++|+||+++++.+.. ...++||||
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~--~~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~~~lv~e~ 81 (262)
T cd05071 5 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM--SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEY 81 (262)
T ss_pred hHHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCcc--CHHHHHHHHHHHHhCCCCCcceEEEEECC-CCcEEEEEc
Confidence 357999999999999999999887777899999875432 12567899999999999999999998754 457899999
Q ss_pred cCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCC
Q 011005 284 MERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSS 363 (496)
Q Consensus 284 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 363 (496)
+++|+|.+++.... ...+++..+..++.|++.||+||| +.+++|+||||+||++++++.++|+|||.+........
T Consensus 82 ~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~aL~~lH---~~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~ 157 (262)
T cd05071 82 MSKGSLLDFLKGEM-GKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY 157 (262)
T ss_pred CCCCcHHHHHhhcc-ccCCCHHHHHHHHHHHHHHHHHHH---HCCccccccCcccEEEcCCCcEEeccCCceeecccccc
Confidence 99999999997542 235789999999999999999999 78999999999999999999999999999976643332
Q ss_pred Cc-cccccccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHH
Q 011005 364 NR-TLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVI 441 (496)
Q Consensus 364 ~~-~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (496)
.. ....++..|+|||+..+..++.++||||||+++|+|++ |+.||.... ......... .....+.. .
T Consensus 158 ~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~-------~~~~~~~~~-~~~~~~~~---~ 226 (262)
T cd05071 158 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMV-------NREVLDQVE-RGYRMPCP---P 226 (262)
T ss_pred ccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCC-------hHHHHHHHh-cCCCCCCc---c
Confidence 21 22345678999999998899999999999999999999 888885321 111111111 11111111 1
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCHHHHHHHHH
Q 011005 442 RDILLISTVSFACLQSNPKSRPTMQSVSQEFL 473 (496)
Q Consensus 442 ~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~ 473 (496)
.....+.+++.+|++.||++||++.++++.+.
T Consensus 227 ~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~ 258 (262)
T cd05071 227 ECPESLHDLMCQCWRKEPEERPTFEYLQAFLE 258 (262)
T ss_pred ccCHHHHHHHHHHccCCcccCCCHHHHHHHHH
Confidence 22335789999999999999999999988764
No 220
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=3.7e-39 Score=309.96 Aligned_cols=260 Identities=22% Similarity=0.322 Sum_probs=198.8
Q ss_pred HhCCCCcceeeecCCeeEEEEEeCC---------------CcEEEEEEcccchhHHHHHHHHHHHHHHHhhccccccccc
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLPN---------------GKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLY 268 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~~---------------~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~ 268 (496)
..+|.+.+.||+|+||.||+|...+ ...||+|.++..........+.+|++++++++|+|+++++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~ 83 (295)
T cd05097 4 RQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLL 83 (295)
T ss_pred hHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEE
Confidence 3579999999999999999986532 2358999987654444456789999999999999999999
Q ss_pred ceeecCCeEEEEEEecCCCChhhhhhCCCC---------CccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCce
Q 011005 269 GYCLHKKCMFLIYEYMERGSLFCNLHNNED---------AVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNI 339 (496)
Q Consensus 269 ~~~~~~~~~~lV~e~~~~g~L~~~l~~~~~---------~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Ni 339 (496)
+++......++||||+++++|.+++..... ...+++..++.++.|++.||+||| +.+++||||||+||
T Consensus 84 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH---~~~i~H~dlkp~Ni 160 (295)
T cd05097 84 GVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLA---SLNFVHRDLATRNC 160 (295)
T ss_pred EEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHH---hcCeeccccChhhE
Confidence 999999999999999999999998865321 124688899999999999999999 78999999999999
Q ss_pred EecCCCCeEEccccccccccCCCCC--ccccccccccccccccccCCcCcccchhhHHHHHHHHHh--CCCCCccccccC
Q 011005 340 LLNSKLEAFVADFGTARLLHADSSN--RTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM--GKHPRDILSSLS 415 (496)
Q Consensus 340 l~~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~--g~~p~~~~~~~~ 415 (496)
++++++.+||+|||++......... .....++..|+|||.+.+..++.++||||||+++|+|++ |..||.......
T Consensus 161 ll~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~ 240 (295)
T cd05097 161 LVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQ 240 (295)
T ss_pred EEcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccChHH
Confidence 9999999999999999765432211 122344678999999999999999999999999999998 566765322100
Q ss_pred CCCCCcchhHhhhc---CCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHH
Q 011005 416 SSSDPKIMLIDVLD---QRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFL 473 (496)
Q Consensus 416 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~ 473 (496)
......+... ......... ..+..+.+++.+||+.||++|||++++++.+.
T Consensus 241 ----~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~ 294 (295)
T cd05097 241 ----VIENTGEFFRNQGRQIYLSQTP---LCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLR 294 (295)
T ss_pred ----HHHHHHHhhhhccccccCCCCC---CCCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence 0000000000 100000000 11235789999999999999999999988763
No 221
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=1.1e-38 Score=303.90 Aligned_cols=256 Identities=29% Similarity=0.466 Sum_probs=206.7
Q ss_pred CCCCcceeeecCCeeEEEEEe-CCCcEEEEEEcccchhHHHHHHHHHHHHHHHhhc---ccccccccceeecCCeEEEEE
Q 011005 206 DFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVL---HRNIVKLYGYCLHKKCMFLIY 281 (496)
Q Consensus 206 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~~~~~~~~~~~~~lV~ 281 (496)
.|+..+.||+|+||.||+|.+ .+++.||+|.+...........+.+|+.++++++ |||++++++++..+...++||
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~ 81 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIM 81 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEE
Confidence 477788899999999999975 5789999999876544444567889999999997 999999999999999999999
Q ss_pred EecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCC
Q 011005 282 EYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHAD 361 (496)
Q Consensus 282 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 361 (496)
||+++++|.+++... .+++..++.++.|++.||.||| ..+++|+||+|+||+++.++.++|+|||++......
T Consensus 82 e~~~~~~L~~~~~~~----~l~~~~~~~i~~~i~~~l~~lh---~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~ 154 (277)
T cd06917 82 EYAEGGSVRTLMKAG----PIAEKYISVIIREVLVALKYIH---KVGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQN 154 (277)
T ss_pred ecCCCCcHHHHHHcc----CCCHHHHHHHHHHHHHHHHHHH---hCCcccCCcCHHHEEEcCCCCEEEccCCceeecCCC
Confidence 999999999988653 6889999999999999999999 789999999999999999999999999999877554
Q ss_pred CCCccccccccccccccccccC-CcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhH
Q 011005 362 SSNRTLLAGTYGYIAPELAYTM-VMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKV 440 (496)
Q Consensus 362 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 440 (496)
........|+..|+|||.+.++ .++.++|+||||+++|+|++|+.||....... .. .......++.....
T Consensus 155 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~-------~~-~~~~~~~~~~~~~~- 225 (277)
T cd06917 155 SSKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFR-------AM-MLIPKSKPPRLEDN- 225 (277)
T ss_pred ccccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhh-------hh-hccccCCCCCCCcc-
Confidence 4334445788999999988754 56889999999999999999999996432211 00 11111111111110
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccC
Q 011005 441 IRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKT 478 (496)
Q Consensus 441 ~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~ 478 (496)
.....+.+++.+||+.||++||++.|++++.|+....
T Consensus 226 -~~~~~~~~~i~~~l~~~p~~R~~~~~il~~~~~~~~~ 262 (277)
T cd06917 226 -GYSKLLREFVAACLDEEPKERLSAEELLKSKWIKAHS 262 (277)
T ss_pred -cCCHHHHHHHHHHcCCCcccCcCHHHHhhChHhhccc
Confidence 0223577899999999999999999999999996654
No 222
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=2.5e-39 Score=309.52 Aligned_cols=263 Identities=22% Similarity=0.290 Sum_probs=197.7
Q ss_pred CCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchh-HHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEe
Q 011005 206 DFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEE-LAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEY 283 (496)
Q Consensus 206 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~ 283 (496)
+|++.+.||+|+||.||+|..+ +|+.||+|.+..... ......+.+|++++++++|+||+++++++.+....++|+||
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEY 80 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEec
Confidence 4788899999999999999764 688999999865321 22234567899999999999999999999999999999999
Q ss_pred cCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCC
Q 011005 284 MERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSS 363 (496)
Q Consensus 284 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 363 (496)
++ ++|.+++.... ..+++..++.++.||++||.||| ..+++||||||+||+++.++.++|+|||+++.......
T Consensus 81 ~~-~~l~~~~~~~~--~~~~~~~~~~~~~qi~~al~~LH---~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~ 154 (284)
T cd07839 81 CD-QDLKKYFDSCN--GDIDPEIVKSFMFQLLKGLAFCH---SHNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVR 154 (284)
T ss_pred CC-CCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEEcCCCcEEECccchhhccCCCCC
Confidence 97 47877776432 25899999999999999999999 78999999999999999999999999999986644333
Q ss_pred CccccccccccccccccccC-CcCcccchhhHHHHHHHHHhCCCCCccccccCC----------CCCCcc--hhHhhhcC
Q 011005 364 NRTLLAGTYGYIAPELAYTM-VMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSS----------SSDPKI--MLIDVLDQ 430 (496)
Q Consensus 364 ~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~----------~~~~~~--~~~~~~~~ 430 (496)
......+++.|+|||.+.+. .++.++||||+|+++|+|++|+.|+........ ...... ........
T Consensus 155 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (284)
T cd07839 155 CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDY 234 (284)
T ss_pred CcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhcccc
Confidence 33345678899999998765 468899999999999999999998632111000 000000 00000000
Q ss_pred CCCCCCC-h-----hHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHH
Q 011005 431 RLPPPVD-R-----KVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLI 474 (496)
Q Consensus 431 ~~~~~~~-~-----~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~ 474 (496)
....... . ........+.+++.+||+.||.+|||++|+++|+|+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h~~f 284 (284)
T cd07839 235 KPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQHPYF 284 (284)
T ss_pred cccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcCCCC
Confidence 0000000 0 000112346789999999999999999999999885
No 223
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.1e-38 Score=308.49 Aligned_cols=260 Identities=23% Similarity=0.359 Sum_probs=203.7
Q ss_pred HhCCCCcceeeecCCeeEEEEEeC--------CCcEEEEEEcccchhHHHHHHHHHHHHHHHhh-cccccccccceeecC
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLP--------NGKVFALKKLHTSEELAFIKSFKNEAQVLSQV-LHRNIVKLYGYCLHK 274 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~ 274 (496)
.++|.+.+.||+|+||.||+|... +...+|+|.+...........+.+|+.+++++ +|+||+++++++...
T Consensus 17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~ 96 (307)
T cd05098 17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 96 (307)
T ss_pred hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecC
Confidence 357999999999999999999652 23579999998654334456788899999999 799999999999999
Q ss_pred CeEEEEEEecCCCChhhhhhCCCC-------------CccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEe
Q 011005 275 KCMFLIYEYMERGSLFCNLHNNED-------------AVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILL 341 (496)
Q Consensus 275 ~~~~lV~e~~~~g~L~~~l~~~~~-------------~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~ 341 (496)
+..++||||+++|+|.+++..... ...+++.+++.++.|++.||+||| +.+++||||||+||++
T Consensus 97 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH---~~gi~H~dlkp~Nill 173 (307)
T cd05098 97 GPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLA---SKKCIHRDLAARNVLV 173 (307)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHH---HCCcccccccHHheEE
Confidence 999999999999999999976432 125889999999999999999999 7799999999999999
Q ss_pred cCCCCeEEccccccccccCCCCCc--cccccccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccCCCC
Q 011005 342 NSKLEAFVADFGTARLLHADSSNR--TLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSS 418 (496)
Q Consensus 342 ~~~~~~kl~Dfg~~~~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~ 418 (496)
+.++.++|+|||.++......... ....+++.|+|||.+.+..++.++||||+|+++|+|++ |+.||....
T Consensus 174 ~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~------ 247 (307)
T cd05098 174 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP------ 247 (307)
T ss_pred cCCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCC------
Confidence 999999999999997654322111 11224568999999999999999999999999999998 888875211
Q ss_pred CCcchhHhhhcCCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhcc
Q 011005 419 DPKIMLIDVLDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRK 477 (496)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~ 477 (496)
.......+......+... .....+.+++.+||..+|++|||+.++++.+.....
T Consensus 248 --~~~~~~~~~~~~~~~~~~---~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~ 301 (307)
T cd05098 248 --VEELFKLLKEGHRMDKPS---NCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILA 301 (307)
T ss_pred --HHHHHHHHHcCCCCCCCC---cCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHH
Confidence 111222222221111111 112357789999999999999999999999876544
No 224
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=6.6e-39 Score=308.39 Aligned_cols=260 Identities=23% Similarity=0.357 Sum_probs=199.8
Q ss_pred HhCCCCcceeeecCCeeEEEEEeC-----------------CCcEEEEEEcccchhHHHHHHHHHHHHHHHhhccccccc
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLP-----------------NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVK 266 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~-----------------~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~ 266 (496)
.++|++.+.||+|+||.||++... ++..||+|.+...........+.+|+.+++.++|+||++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~ 83 (296)
T cd05095 4 RKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIR 83 (296)
T ss_pred hhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcce
Confidence 357999999999999999998543 244689999876544444567899999999999999999
Q ss_pred ccceeecCCeEEEEEEecCCCChhhhhhCCCC--------CccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCc
Q 011005 267 LYGYCLHKKCMFLIYEYMERGSLFCNLHNNED--------AVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNN 338 (496)
Q Consensus 267 ~~~~~~~~~~~~lV~e~~~~g~L~~~l~~~~~--------~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~N 338 (496)
+++++...+..++||||+++|+|.+++..... ...+++..+..++.|++.||+||| +.+++|+||||+|
T Consensus 84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH---~~~i~H~dlkp~N 160 (296)
T cd05095 84 LLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLS---SLNFVHRDLATRN 160 (296)
T ss_pred EEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHH---HCCeecccCChhe
Confidence 99999999999999999999999999876421 124778889999999999999999 7799999999999
Q ss_pred eEecCCCCeEEccccccccccCCCCC--ccccccccccccccccccCCcCcccchhhHHHHHHHHHh--CCCCCcccccc
Q 011005 339 ILLNSKLEAFVADFGTARLLHADSSN--RTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM--GKHPRDILSSL 414 (496)
Q Consensus 339 il~~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~--g~~p~~~~~~~ 414 (496)
|+++.++.++|+|||+++.+...... .....+++.|+|||...+..++.++||||||+++|||++ |..||......
T Consensus 161 ili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~ 240 (296)
T cd05095 161 CLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDE 240 (296)
T ss_pred EEEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccChH
Confidence 99999999999999999765432211 122334678999999888889999999999999999998 77887532211
Q ss_pred CCCCCCcchhHhhhcC---CCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHH
Q 011005 415 SSSSDPKIMLIDVLDQ---RLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFL 473 (496)
Q Consensus 415 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~ 473 (496)
.. .......... ....+... .....+.+++.+||+.||++||++.|+++.+.
T Consensus 241 ~~----~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~ 295 (296)
T cd05095 241 QV----IENTGEFFRDQGRQVYLPKPA---LCPDSLYKLMLSCWRRNAKERPSFQEIHATLL 295 (296)
T ss_pred HH----HHHHHHHHhhccccccCCCCC---CCCHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 00 0000010000 00000000 11235779999999999999999999998763
No 225
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.7e-38 Score=306.83 Aligned_cols=259 Identities=23% Similarity=0.361 Sum_probs=203.6
Q ss_pred HhCCCCcceeeecCCeeEEEEEe--------CCCcEEEEEEcccchhHHHHHHHHHHHHHHHhh-cccccccccceeecC
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQL--------PNGKVFALKKLHTSEELAFIKSFKNEAQVLSQV-LHRNIVKLYGYCLHK 274 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~--------~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~ 274 (496)
.++|.+.+.||+|+||.||+|.. .++..||+|.+.........+.+.+|+.+++.+ +||||+++++++...
T Consensus 14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~ 93 (304)
T cd05101 14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 93 (304)
T ss_pred HHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecC
Confidence 46788999999999999999964 134579999987654444457789999999999 799999999999999
Q ss_pred CeEEEEEEecCCCChhhhhhCCCC-------------CccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEe
Q 011005 275 KCMFLIYEYMERGSLFCNLHNNED-------------AVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILL 341 (496)
Q Consensus 275 ~~~~lV~e~~~~g~L~~~l~~~~~-------------~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~ 341 (496)
...++||||+++|+|.+++..... ...+++..+..++.||+.||+||| +.+++||||||+||++
T Consensus 94 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH---~~givH~dlkp~Nili 170 (304)
T cd05101 94 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLA---SQKCIHRDLAARNVLV 170 (304)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHH---HCCeeecccccceEEE
Confidence 999999999999999999875421 235788899999999999999999 7899999999999999
Q ss_pred cCCCCeEEccccccccccCCCCC--ccccccccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccCCCC
Q 011005 342 NSKLEAFVADFGTARLLHADSSN--RTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSS 418 (496)
Q Consensus 342 ~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~ 418 (496)
+.++.++|+|||+++........ .....+++.|+|||++.+..++.++||||||+++|++++ |..||....
T Consensus 171 ~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~------ 244 (304)
T cd05101 171 TENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP------ 244 (304)
T ss_pred cCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCC------
Confidence 99999999999999876433221 122345678999999999899999999999999999998 788875221
Q ss_pred CCcchhHhhhcCCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhc
Q 011005 419 DPKIMLIDVLDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITR 476 (496)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~ 476 (496)
.......+.......... .....+.+++.+||+.+|++|||+.|+++.+...-
T Consensus 245 --~~~~~~~~~~~~~~~~~~---~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~ 297 (304)
T cd05101 245 --VEELFKLLKEGHRMDKPA---NCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRIL 297 (304)
T ss_pred --HHHHHHHHHcCCcCCCCC---CCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHH
Confidence 111122221111111111 12235778999999999999999999999985543
No 226
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=3.4e-39 Score=308.82 Aligned_cols=264 Identities=26% Similarity=0.354 Sum_probs=201.8
Q ss_pred hCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchh-HHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEE
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEE-LAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYE 282 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e 282 (496)
++|++.+.||+|+||.||+|.++ +++.||+|.+..... ....+.+.+|+++++.++||||+++++++..++..++|+|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFE 80 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEe
Confidence 46888999999999999999875 589999998865432 2234567899999999999999999999999999999999
Q ss_pred ecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCC
Q 011005 283 YMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADS 362 (496)
Q Consensus 283 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 362 (496)
|++++++..+..... .+++..+..++.|++.||+||| +.+++|+||+|+||++++++.++|+|||++.......
T Consensus 81 ~~~~~~l~~~~~~~~---~~~~~~~~~~~~~i~~~l~~LH---~~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~ 154 (286)
T cd07846 81 FVDHTVLDDLEKYPN---GLDESRVRKYLFQILRGIEFCH---SHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG 154 (286)
T ss_pred cCCccHHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEECCCCcEEEEeeeeeeeccCCc
Confidence 999998887765432 4899999999999999999999 7799999999999999999999999999998765443
Q ss_pred CCcccccccccccccccccc-CCcCcccchhhHHHHHHHHHhCCCCCccccccCC---------CCCCcc----hhHhhh
Q 011005 363 SNRTLLAGTYGYIAPELAYT-MVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSS---------SSDPKI----MLIDVL 428 (496)
Q Consensus 363 ~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~---------~~~~~~----~~~~~~ 428 (496)
.......++..|+|||++.+ ..++.++||||||+++|||++|+.||........ ...... ......
T Consensus 155 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (286)
T cd07846 155 EVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLF 234 (286)
T ss_pred cccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchHh
Confidence 33344567889999998875 4577899999999999999999999853221000 000000 000000
Q ss_pred cC-CCCCCCChh-----HHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHH
Q 011005 429 DQ-RLPPPVDRK-----VIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLI 474 (496)
Q Consensus 429 ~~-~~~~~~~~~-----~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~ 474 (496)
.. ..+...... .......+.+++.+||+.+|++||++.++++|+|+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~ 286 (286)
T cd07846 235 AGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHHEFF 286 (286)
T ss_pred hccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcCCCC
Confidence 00 000000000 00113457899999999999999999999999875
No 227
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=1.3e-38 Score=303.84 Aligned_cols=259 Identities=19% Similarity=0.298 Sum_probs=206.0
Q ss_pred HhCCCCcceeeecCCeeEEEEEeCC-----CcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeec-CCeE
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLPN-----GKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLH-KKCM 277 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-~~~~ 277 (496)
.++|++.+.||+|+||.||+|.+.+ +..|++|.+...........+.+|+.++++++|+||+++++++.. +...
T Consensus 5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~ 84 (280)
T cd05043 5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEPP 84 (280)
T ss_pred hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCC
Confidence 4678899999999999999998765 788999998765555556778999999999999999999998776 4678
Q ss_pred EEEEEecCCCChhhhhhCCCCC-----ccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccc
Q 011005 278 FLIYEYMERGSLFCNLHNNEDA-----VELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADF 352 (496)
Q Consensus 278 ~lV~e~~~~g~L~~~l~~~~~~-----~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Df 352 (496)
++++||+++|+|.+++...... ..+++..+..++.|++.||+||| +.+++|+||||+||++++++.+||+||
T Consensus 85 ~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH---~~~i~H~di~p~nil~~~~~~~kl~d~ 161 (280)
T cd05043 85 FVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLH---KRGVIHKDIAARNCVIDEELQVKITDN 161 (280)
T ss_pred EEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccCHhhEEEcCCCcEEECCC
Confidence 8999999999999998764322 46899999999999999999999 789999999999999999999999999
Q ss_pred cccccccCCCCC--ccccccccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccCCCCCCcchhHhhhc
Q 011005 353 GTARLLHADSSN--RTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSSDPKIMLIDVLD 429 (496)
Q Consensus 353 g~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~ 429 (496)
|+++.+...... .....++..|+|||++.+..++.++||||||+++||+++ |+.||..... ........
T Consensus 162 g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~--------~~~~~~~~ 233 (280)
T cd05043 162 ALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDP--------FEMAAYLK 233 (280)
T ss_pred CCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCH--------HHHHHHHH
Confidence 999865432211 112235667999999998899999999999999999999 9999863221 11122221
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhc
Q 011005 430 QRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITR 476 (496)
Q Consensus 430 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~ 476 (496)
......... .....+.+++.+||+.||++|||+.|+++.+....
T Consensus 234 ~~~~~~~~~---~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~ 277 (280)
T cd05043 234 DGYRLAQPI---NCPDELFAVMACCWALDPEERPSFSQLVQCLTDFH 277 (280)
T ss_pred cCCCCCCCC---cCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHH
Confidence 111111111 11235789999999999999999999999886543
No 228
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-40 Score=316.23 Aligned_cols=255 Identities=29% Similarity=0.395 Sum_probs=207.0
Q ss_pred CCCcceeeecCCeeEEEEEe-CCCcEEEEEEcccch--hHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEe
Q 011005 207 FDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEY 283 (496)
Q Consensus 207 ~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~ 283 (496)
|.-.+.||.|+||.||-|++ .+.+.||||++..+. ..+....+..|+.++++++|||++.+-|+|......|+||||
T Consensus 28 f~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVMEY 107 (948)
T KOG0577|consen 28 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVMEY 107 (948)
T ss_pred HHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHHH
Confidence 44456799999999999965 578899999997643 234457789999999999999999999999999999999999
Q ss_pred cCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCC
Q 011005 284 MERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSS 363 (496)
Q Consensus 284 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 363 (496)
|- ||-.+++.-... .+-+-++..|+.+.+.||+||| +.+.||||||+.|||+++.|.|||+|||.|....+
T Consensus 108 Cl-GSAsDlleVhkK--plqEvEIAAi~~gaL~gLaYLH---S~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~P--- 178 (948)
T KOG0577|consen 108 CL-GSASDLLEVHKK--PLQEVEIAAITHGALQGLAYLH---SHNRIHRDIKAGNILLSEPGLVKLADFGSASIMAP--- 178 (948)
T ss_pred Hh-ccHHHHHHHHhc--cchHHHHHHHHHHHHHHHHHHH---HhhHHhhhccccceEecCCCeeeeccccchhhcCc---
Confidence 96 477777765432 5778888999999999999999 78999999999999999999999999999987643
Q ss_pred Cccccccccccccccccc---cCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhH
Q 011005 364 NRTLLAGTYGYIAPELAY---TMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKV 440 (496)
Q Consensus 364 ~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 440 (496)
...++|||.|||||++. .+.|+-++||||+|++..||...++|+-.++-+ .....+....-|. .. .
T Consensus 179 -AnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAM-------SALYHIAQNesPt-Lq--s 247 (948)
T KOG0577|consen 179 -ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM-------SALYHIAQNESPT-LQ--S 247 (948)
T ss_pred -hhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHH-------HHHHHHHhcCCCC-CC--C
Confidence 34579999999999875 568999999999999999999999995322110 1111222222221 11 2
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCCCC
Q 011005 441 IRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTPLV 481 (496)
Q Consensus 441 ~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~~~ 481 (496)
..+...+.+|+..||+.-|.+|||.+++++|.|+.+.-|..
T Consensus 248 ~eWS~~F~~Fvd~CLqKipqeRptse~ll~H~fv~R~Rp~t 288 (948)
T KOG0577|consen 248 NEWSDYFRNFVDSCLQKIPQERPTSEELLKHRFVLRERPPT 288 (948)
T ss_pred chhHHHHHHHHHHHHhhCcccCCcHHHHhhcchhccCCCch
Confidence 24455788999999999999999999999999999887653
No 229
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=8.4e-39 Score=310.84 Aligned_cols=257 Identities=23% Similarity=0.340 Sum_probs=187.4
Q ss_pred ceeeecCCeeEEEEEeC---CCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeec--CCeEEEEEEecC
Q 011005 211 YCIGTGGYGSVYKAQLP---NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLH--KKCMFLIYEYME 285 (496)
Q Consensus 211 ~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~--~~~~~lV~e~~~ 285 (496)
..||+|+||+||+|..+ ++..||+|.+..... ...+.+|+.++++++||||+++++++.. +...++||||+.
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~---~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~ 83 (317)
T cd07867 7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGI---SMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAE 83 (317)
T ss_pred eEeccCCCeeEEEEEecCCCccceEEEEEecCCCC---cHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeC
Confidence 57999999999999865 457899998875432 2456789999999999999999998854 557899999987
Q ss_pred CCChhhhhhCC------CCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEe----cCCCCeEEcccccc
Q 011005 286 RGSLFCNLHNN------EDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILL----NSKLEAFVADFGTA 355 (496)
Q Consensus 286 ~g~L~~~l~~~------~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~----~~~~~~kl~Dfg~~ 355 (496)
+ +|.+.+... .....+++..+..++.||+.||.||| +.+++||||||+||++ +.++.+||+|||++
T Consensus 84 ~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a 159 (317)
T cd07867 84 H-DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLH---ANWVLHRDLKPANILVMGEGPERGRVKIADMGFA 159 (317)
T ss_pred C-cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHH---hCCEEcCCCCHHHEEEccCCCCCCcEEEeeccce
Confidence 5 777766422 12235888999999999999999999 7899999999999999 55678999999999
Q ss_pred ccccCCCC---Ccccccccccccccccccc-CCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCC--cchhHhhhc
Q 011005 356 RLLHADSS---NRTLLAGTYGYIAPELAYT-MVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDP--KIMLIDVLD 429 (496)
Q Consensus 356 ~~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~--~~~~~~~~~ 429 (496)
+....... ......+|+.|+|||++.+ ..++.++||||+|+++|||+||+.||............ .........
T Consensus 160 ~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~ 239 (317)
T cd07867 160 RLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFS 239 (317)
T ss_pred eccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHHHHHHH
Confidence 87643322 1233568899999999876 45789999999999999999999998633211000000 000000000
Q ss_pred ----------------------------CCCCCCCC-----hhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHH
Q 011005 430 ----------------------------QRLPPPVD-----RKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLI 474 (496)
Q Consensus 430 ----------------------------~~~~~~~~-----~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~ 474 (496)
........ .........+.+++.+||+.||.+|||+.|+++|+|+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~hp~f 317 (317)
T cd07867 240 VMGFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQDPYF 317 (317)
T ss_pred hcCCCChhhhhhhhhcccchhhhhhhcccccCCchhhhhhhcccCCCChHHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence 00000000 0000011246789999999999999999999999985
No 230
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=2e-38 Score=298.53 Aligned_cols=245 Identities=22% Similarity=0.357 Sum_probs=193.0
Q ss_pred eeecCCeeEEEEEeC---CCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEecCCCCh
Q 011005 213 IGTGGYGSVYKAQLP---NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEYMERGSL 289 (496)
Q Consensus 213 lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~~~~g~L 289 (496)
||+|+||.||+|.+. .+..||+|.+.........+.+.+|+.++++++|+||+++++++.. ...++||||+++++|
T Consensus 3 ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~-~~~~lv~e~~~~~~L 81 (257)
T cd05115 3 LGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCEA-EALMLVMEMASGGPL 81 (257)
T ss_pred cCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcC-CCeEEEEEeCCCCCH
Confidence 899999999999653 3557999998766544455678999999999999999999998854 468999999999999
Q ss_pred hhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCCCc---c
Q 011005 290 FCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNR---T 366 (496)
Q Consensus 290 ~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~---~ 366 (496)
.+++.... ..+++..++.++.|++.||+||| +.+++||||||+||+++.++.++|+|||++.......... .
T Consensus 82 ~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 156 (257)
T cd05115 82 NKFLSGKK--DEITVSNVVELMHQVSMGMKYLE---GKNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARS 156 (257)
T ss_pred HHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHH---hcCeeecccchheEEEcCCCcEEeccCCccccccCCccceeccC
Confidence 99987533 26899999999999999999999 7799999999999999999999999999998654332211 1
Q ss_pred ccccccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHHHHHH
Q 011005 367 LLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVIRDIL 445 (496)
Q Consensus 367 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (496)
...+++.|+|||.+....++.++||||||+++|++++ |..||..... ......+.......... ....
T Consensus 157 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~--------~~~~~~~~~~~~~~~~~---~~~~ 225 (257)
T cd05115 157 AGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKG--------PEVMSFIEQGKRLDCPA---ECPP 225 (257)
T ss_pred CCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCH--------HHHHHHHHCCCCCCCCC---CCCH
Confidence 1223568999999988889999999999999999996 9999863321 11112222211111111 1123
Q ss_pred HHHHHHHhcccCCCCCCCCHHHHHHHHHH
Q 011005 446 LISTVSFACLQSNPKSRPTMQSVSQEFLI 474 (496)
Q Consensus 446 ~l~~li~~cl~~dP~~Rps~~evl~~~~~ 474 (496)
.+.+++.+||+.||++||++.++.+.+..
T Consensus 226 ~l~~li~~c~~~~~~~Rp~~~~i~~~l~~ 254 (257)
T cd05115 226 EMYALMKDCWIYKWEDRPNFAKVEERMRT 254 (257)
T ss_pred HHHHHHHHHcCCChhhCcCHHHHHHHHhh
Confidence 57789999999999999999999988754
No 231
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=1.4e-38 Score=301.37 Aligned_cols=254 Identities=23% Similarity=0.357 Sum_probs=198.9
Q ss_pred hCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccch----hHHHHHHHHHHHHHHHhhcccccccccceeec--CCeE
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSE----ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLH--KKCM 277 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~--~~~~ 277 (496)
.+|+..+.||+|+||.||+|... .++.|++|.+.... .......+.+|+.++++++||||+++++++.. ....
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL 81 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence 36888999999999999999764 68899999886431 22344568899999999999999999998865 3578
Q ss_pred EEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEcccccccc
Q 011005 278 FLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARL 357 (496)
Q Consensus 278 ~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 357 (496)
++++||+++++|.+.+.... .+++...+.++.|++.||.||| +.+++||||+|+||+++.++.++|+|||++..
T Consensus 82 ~l~~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~~l~~LH---~~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~ 155 (266)
T cd06651 82 TIFMEYMPGGSVKDQLKAYG---ALTESVTRKYTRQILEGMSYLH---SNMIVHRDIKGANILRDSAGNVKLGDFGASKR 155 (266)
T ss_pred EEEEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEECCCCCEEEccCCCccc
Confidence 89999999999999987643 5788999999999999999999 78999999999999999999999999999976
Q ss_pred ccCCC---CCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCC
Q 011005 358 LHADS---SNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPP 434 (496)
Q Consensus 358 ~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (496)
..... .......++..|+|||.+.+..++.++||||+|+++|||++|+.||.... ..............+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~-------~~~~~~~~~~~~~~~ 228 (266)
T cd06651 156 LQTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYE-------AMAAIFKIATQPTNP 228 (266)
T ss_pred cccccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccc-------hHHHHHHHhcCCCCC
Confidence 53211 11223457889999999999889999999999999999999999986321 111111111111111
Q ss_pred CCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHh
Q 011005 435 PVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLIT 475 (496)
Q Consensus 435 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~ 475 (496)
... ......+.+++ +||..+|++||+++|+++|+|+.
T Consensus 229 ~~~---~~~~~~~~~li-~~~~~~p~~Rp~~~eil~hp~~~ 265 (266)
T cd06651 229 QLP---SHISEHARDFL-GCIFVEARHRPSAEELLRHPFAQ 265 (266)
T ss_pred CCc---hhcCHHHHHHH-HHhcCChhhCcCHHHHhcCcccc
Confidence 111 11122355666 68889999999999999999864
No 232
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=1.2e-38 Score=312.66 Aligned_cols=259 Identities=23% Similarity=0.348 Sum_probs=199.8
Q ss_pred HhCCCCcceeeecCCeeEEEEEe------CCCcEEEEEEcccchhHHHHHHHHHHHHHHHhh-cccccccccceeecC-C
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQL------PNGKVFALKKLHTSEELAFIKSFKNEAQVLSQV-LHRNIVKLYGYCLHK-K 275 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~-~ 275 (496)
.++|.+.+.||+|+||.||+|.+ .+++.||||.++..........+.+|+.++.++ +|+||+++++++... .
T Consensus 6 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 85 (343)
T cd05103 6 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG 85 (343)
T ss_pred hhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCC
Confidence 46799999999999999999963 357889999997654444456788999999999 689999999988654 4
Q ss_pred eEEEEEEecCCCChhhhhhCCCC---------------------------------------------------------
Q 011005 276 CMFLIYEYMERGSLFCNLHNNED--------------------------------------------------------- 298 (496)
Q Consensus 276 ~~~lV~e~~~~g~L~~~l~~~~~--------------------------------------------------------- 298 (496)
..++||||+++|+|.+++.....
T Consensus 86 ~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (343)
T cd05103 86 PLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEE 165 (343)
T ss_pred ceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhh
Confidence 67899999999999998864311
Q ss_pred -------CccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCCC--ccccc
Q 011005 299 -------AVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSN--RTLLA 369 (496)
Q Consensus 299 -------~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~ 369 (496)
...+++..+..++.|++.||+||| +.+++||||||+||+++.++.++|+|||++......... .....
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~ 242 (343)
T cd05103 166 AEQEDLYKKVLTLEDLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDAR 242 (343)
T ss_pred hhhhhhhhccCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCC
Confidence 123678888999999999999999 789999999999999999999999999999765332211 11233
Q ss_pred cccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHHHHHHHHH
Q 011005 370 GTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVIRDILLIS 448 (496)
Q Consensus 370 gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 448 (496)
+++.|+|||.+.+..++.++||||||+++|+|++ |..||..... .......+........... ....+.
T Consensus 243 ~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~-------~~~~~~~~~~~~~~~~~~~---~~~~~~ 312 (343)
T cd05103 243 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI-------DEEFCRRLKEGTRMRAPDY---TTPEMY 312 (343)
T ss_pred CCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccc-------cHHHHHHHhccCCCCCCCC---CCHHHH
Confidence 5668999999999999999999999999999997 9999863211 1111111111111111110 112467
Q ss_pred HHHHhcccCCCCCCCCHHHHHHHHHHh
Q 011005 449 TVSFACLQSNPKSRPTMQSVSQEFLIT 475 (496)
Q Consensus 449 ~li~~cl~~dP~~Rps~~evl~~~~~~ 475 (496)
+++.+||+.||++|||+.|+++++...
T Consensus 313 ~~~~~cl~~~p~~Rps~~eil~~l~~~ 339 (343)
T cd05103 313 QTMLDCWHGEPSQRPTFSELVEHLGNL 339 (343)
T ss_pred HHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 889999999999999999999998654
No 233
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=5.8e-39 Score=308.85 Aligned_cols=259 Identities=23% Similarity=0.338 Sum_probs=202.1
Q ss_pred HhCCCCcceeeecCCeeEEEEEeCC-----------------CcEEEEEEcccchhHHHHHHHHHHHHHHHhhccccccc
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLPN-----------------GKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVK 266 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~~-----------------~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~ 266 (496)
.++|++.+.||+|+||.||+|..++ +..||+|.+.........+.+.+|++++++++||||++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~ 83 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIAR 83 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeE
Confidence 4679999999999999999997542 24689999887654455678899999999999999999
Q ss_pred ccceeecCCeEEEEEEecCCCChhhhhhCCC--------CCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCc
Q 011005 267 LYGYCLHKKCMFLIYEYMERGSLFCNLHNNE--------DAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNN 338 (496)
Q Consensus 267 ~~~~~~~~~~~~lV~e~~~~g~L~~~l~~~~--------~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~N 338 (496)
+++++..+...++|||++++++|.+++.... ....+++..++.++.|++.||+||| +.+++|+||||+|
T Consensus 84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH---~~~i~H~dlkp~N 160 (296)
T cd05051 84 LLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLE---SLNFVHRDLATRN 160 (296)
T ss_pred EEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHH---HcCccccccchhc
Confidence 9999999999999999999999999987643 1225899999999999999999999 7799999999999
Q ss_pred eEecCCCCeEEccccccccccCCCC--CccccccccccccccccccCCcCcccchhhHHHHHHHHHh--CCCCCcccccc
Q 011005 339 ILLNSKLEAFVADFGTARLLHADSS--NRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM--GKHPRDILSSL 414 (496)
Q Consensus 339 il~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~--g~~p~~~~~~~ 414 (496)
|+++.++.++|+|||+++....... ......+++.|+|||.+.+..++.++||||||+++|||++ |..||.....
T Consensus 161 ili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~- 239 (296)
T cd05051 161 CLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTD- 239 (296)
T ss_pred eeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcCh-
Confidence 9999999999999999976533221 1223446778999999998889999999999999999998 6777753211
Q ss_pred CCCCCCcchhHhhhcC----CCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHH
Q 011005 415 SSSSDPKIMLIDVLDQ----RLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFL 473 (496)
Q Consensus 415 ~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~ 473 (496)
.......... ........ .......+.+++.+||+.||++|||+.|+++.+.
T Consensus 240 ------~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~ 295 (296)
T cd05051 240 ------QQVIENAGHFFRDDGRQIYLPR-PPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQ 295 (296)
T ss_pred ------HHHHHHHHhccccccccccCCC-ccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence 1111111100 00000000 0111235789999999999999999999988763
No 234
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=2.3e-38 Score=298.77 Aligned_cols=248 Identities=28% Similarity=0.448 Sum_probs=201.4
Q ss_pred ceeeecCCeeEEEEEeCC----CcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEecCC
Q 011005 211 YCIGTGGYGSVYKAQLPN----GKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEYMER 286 (496)
Q Consensus 211 ~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~~~~ 286 (496)
+.||+|+||.||+|.... +..|++|.+.........+.+.+|+++++.++|+|++++++++......++||||+++
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG 80 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence 358999999999997653 7889999998765444467889999999999999999999999999999999999999
Q ss_pred CChhhhhhCCCC------CccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccC
Q 011005 287 GSLFCNLHNNED------AVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHA 360 (496)
Q Consensus 287 g~L~~~l~~~~~------~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 360 (496)
++|.+++..... ...+++..++.++.|++.||+||| +.+++|+||+|+||+++.++.++|+|||.+.....
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH---~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~ 157 (262)
T cd00192 81 GDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLA---SKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYD 157 (262)
T ss_pred CcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHH---cCCcccCccCcceEEECCCCcEEEccccccccccc
Confidence 999999987521 247899999999999999999999 78999999999999999999999999999987754
Q ss_pred CC--CCccccccccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccCCCCCCcchhHhhhcCCCCCCCC
Q 011005 361 DS--SNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVD 437 (496)
Q Consensus 361 ~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (496)
.. .......+++.|+|||.+.+..++.++||||+|+++|+|++ |..||.... ............ .....
T Consensus 158 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~-------~~~~~~~~~~~~-~~~~~ 229 (262)
T cd00192 158 DDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLS-------NEEVLEYLRKGY-RLPKP 229 (262)
T ss_pred ccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCC-------HHHHHHHHHcCC-CCCCC
Confidence 32 12233457789999999998899999999999999999999 699986431 111112221111 11111
Q ss_pred hhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHH
Q 011005 438 RKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEF 472 (496)
Q Consensus 438 ~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~ 472 (496)
. .....+.+++.+||+.+|++|||+.|+++++
T Consensus 230 ~---~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l 261 (262)
T cd00192 230 E---YCPDELYELMLSCWQLDPEDRPTFSELVERL 261 (262)
T ss_pred c---cCChHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence 1 1133578999999999999999999999876
No 235
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=1.9e-38 Score=303.19 Aligned_cols=258 Identities=26% Similarity=0.356 Sum_probs=197.8
Q ss_pred CCCcceeeecCCeeEEEEEe-----CCCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecC--CeEEE
Q 011005 207 FDIRYCIGTGGYGSVYKAQL-----PNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHK--KCMFL 279 (496)
Q Consensus 207 ~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~l 279 (496)
|++.+.||+|+||+||++.. .+++.||+|.+...........+.+|++++++++||||+++++++... ...++
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (283)
T cd05080 6 LKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQL 85 (283)
T ss_pred ceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEE
Confidence 38889999999999988642 357889999987654334456788999999999999999999988653 46889
Q ss_pred EEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEcccccccccc
Q 011005 280 IYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLH 359 (496)
Q Consensus 280 V~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 359 (496)
||||+++++|.+++... .+++..++.++.|++.||.||| +.+++||||||+||++++++.++|+|||+++...
T Consensus 86 v~e~~~~~~l~~~~~~~----~l~~~~~~~i~~~l~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~ 158 (283)
T cd05080 86 IMEYVPLGSLRDYLPKH----KLNLAQLLLFAQQICEGMAYLH---SQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVP 158 (283)
T ss_pred EecCCCCCCHHHHHHHc----CCCHHHHHHHHHHHHHHHHHHH---HCCeeccccChheEEEcCCCcEEEeecccccccC
Confidence 99999999999998753 5899999999999999999999 7799999999999999999999999999998764
Q ss_pred CCCCC---ccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccC----CC---CCCcchhHhhhc
Q 011005 360 ADSSN---RTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLS----SS---SDPKIMLIDVLD 429 (496)
Q Consensus 360 ~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~----~~---~~~~~~~~~~~~ 429 (496)
..... .....++..|+|||.+.+..++.++||||||+++|||++|+.|+....... .. ........+...
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (283)
T cd05080 159 EGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELLE 238 (283)
T ss_pred CcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhhhh
Confidence 33221 112235567999999998899999999999999999999999975322100 00 000001111111
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHH
Q 011005 430 QRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLI 474 (496)
Q Consensus 430 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~ 474 (496)
.....+... .....+.+++.+||+.||++|||++++++.+..
T Consensus 239 ~~~~~~~~~---~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~ 280 (283)
T cd05080 239 RGMRLPCPK---NCPQEVYILMKNCWETEAKFRPTFRSLIPILKE 280 (283)
T ss_pred cCCCCCCCC---CCCHHHHHHHHHHhccChhhCCCHHHHHHHHHH
Confidence 111111111 112357899999999999999999999988754
No 236
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=1.5e-38 Score=300.13 Aligned_cols=253 Identities=28% Similarity=0.463 Sum_probs=203.4
Q ss_pred HhCCCCcceeeecCCeeEEEEEeCCCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEe
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEY 283 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~ 283 (496)
.++|.+.+.||+|+||.||+|..++++.||+|.+..... ..+.+.+|+.++++++|+||+++++++......++||||
T Consensus 5 ~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 82 (261)
T cd05034 5 RESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTM--SPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEY 82 (261)
T ss_pred hhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCcc--CHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEec
Confidence 467999999999999999999988888999999876432 235688999999999999999999999988899999999
Q ss_pred cCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCC
Q 011005 284 MERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSS 363 (496)
Q Consensus 284 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 363 (496)
+++++|.+++.... ...+++..+..++.|++.|+.||| +.+++|+||+|+||++++++.++|+|||++........
T Consensus 83 ~~~~~L~~~i~~~~-~~~~~~~~~~~~~~~i~~al~~lh---~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~ 158 (261)
T cd05034 83 MSKGSLLDFLKSGE-GKKLRLPQLVDMAAQIAEGMAYLE---SRNYIHRDLAARNILVGENLVCKIADFGLARLIEDDEY 158 (261)
T ss_pred cCCCCHHHHHhccc-cCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCcchheEEEcCCCCEEECccccceeccchhh
Confidence 99999999997643 236899999999999999999999 77999999999999999999999999999976643211
Q ss_pred C-ccccccccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHH
Q 011005 364 N-RTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVI 441 (496)
Q Consensus 364 ~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (496)
. .....++..|+|||.+.+..++.++||||+|+++|++++ |+.||.... ......... .....+....
T Consensus 159 ~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~-------~~~~~~~~~-~~~~~~~~~~-- 228 (261)
T cd05034 159 TAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMT-------NREVLEQVE-RGYRMPRPPN-- 228 (261)
T ss_pred hhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCC-------HHHHHHHHH-cCCCCCCCCC--
Confidence 1 112234568999999999899999999999999999998 999985321 111222222 2111111111
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCHHHHHHHHH
Q 011005 442 RDILLISTVSFACLQSNPKSRPTMQSVSQEFL 473 (496)
Q Consensus 442 ~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~ 473 (496)
....+.+++.+|++.+|++||+++++.+.+.
T Consensus 229 -~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~ 259 (261)
T cd05034 229 -CPEELYDLMLQCWDKDPEERPTFEYLQSFLE 259 (261)
T ss_pred -CCHHHHHHHHHHcccCcccCCCHHHHHHHHh
Confidence 1235788999999999999999999988764
No 237
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=6.5e-39 Score=316.06 Aligned_cols=259 Identities=21% Similarity=0.282 Sum_probs=194.1
Q ss_pred HhCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEE
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYE 282 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e 282 (496)
..+|.+.+.||+|+||.||+|... +++.||+|...... ...|+.++++++|+||+++++++......++|+|
T Consensus 65 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~~-------~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 137 (357)
T PHA03209 65 SLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKGT-------TLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLP 137 (357)
T ss_pred hcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCccc-------cHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEE
Confidence 457999999999999999999765 56789999754322 3468999999999999999999999999999999
Q ss_pred ecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCC
Q 011005 283 YMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADS 362 (496)
Q Consensus 283 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 362 (496)
++. ++|.+++.... ..+++..+..|+.||+.||.||| .++|+||||||+||+++.++.++|+|||+++.....
T Consensus 138 ~~~-~~l~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~- 210 (357)
T PHA03209 138 HYS-SDLYTYLTKRS--RPLPIDQALIIEKQILEGLRYLH---AQRIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVA- 210 (357)
T ss_pred ccC-CcHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEEecCccccccccC-
Confidence 995 58888876533 26899999999999999999999 789999999999999999999999999999754322
Q ss_pred CCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCC-ccccccCCC--CCCcchhHhhhcC------CCC
Q 011005 363 SNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPR-DILSSLSSS--SDPKIMLIDVLDQ------RLP 433 (496)
Q Consensus 363 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~-~~~~~~~~~--~~~~~~~~~~~~~------~~~ 433 (496)
.......||+.|+|||++.+..++.++|||||||++|||+++..|+ ......... ..........+.. ..+
T Consensus 211 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 290 (357)
T PHA03209 211 PAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEEFP 290 (357)
T ss_pred cccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChhhcC
Confidence 2223456899999999999999999999999999999999865553 321100000 0000000000000 000
Q ss_pred -------------------CCCChh-HH---HHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhc
Q 011005 434 -------------------PPVDRK-VI---RDILLISTVSFACLQSNPKSRPTMQSVSQEFLITR 476 (496)
Q Consensus 434 -------------------~~~~~~-~~---~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~ 476 (496)
.+.... .. .......+++.+||+.||++|||+.|+++|+|+..
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~hp~f~~ 356 (357)
T PHA03209 291 RDPGSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILNYPMFAQ 356 (357)
T ss_pred CCCccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhcCchhcc
Confidence 000000 00 01123456899999999999999999999999864
No 238
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=6e-39 Score=305.15 Aligned_cols=258 Identities=28% Similarity=0.410 Sum_probs=204.1
Q ss_pred HHhCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchhHHHHHHHHHHHHHHHhh-cccccccccceeecCC-----
Q 011005 203 ATEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFKNEAQVLSQV-LHRNIVKLYGYCLHKK----- 275 (496)
Q Consensus 203 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~----- 275 (496)
.+++|++.+.||+|++|.||+|..+ +++.+++|.+..... ..+.+.+|+.+++++ .|+||+++++++....
T Consensus 4 ~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~ 81 (275)
T cd06608 4 PTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED--EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGND 81 (275)
T ss_pred chhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch--hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcc
Confidence 4688999999999999999999775 578899999876543 235688999999999 6999999999997644
Q ss_pred -eEEEEEEecCCCChhhhhhCCC-CCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEcccc
Q 011005 276 -CMFLIYEYMERGSLFCNLHNNE-DAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFG 353 (496)
Q Consensus 276 -~~~lV~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg 353 (496)
..++||||+++++|.+++.... ....+++..+..++.|++.||.||| +.+++|+||+|+||+++.++.++|+|||
T Consensus 82 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH---~~~i~H~~l~p~ni~~~~~~~~~l~d~~ 158 (275)
T cd06608 82 DQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLH---ENKVIHRDIKGQNILLTKNAEVKLVDFG 158 (275)
T ss_pred eEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHh---cCCcccCCCCHHHEEEccCCeEEECCCc
Confidence 5899999999999999886532 2236899999999999999999999 7899999999999999999999999999
Q ss_pred ccccccCCCCCcccccccccccccccccc-----CCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhh
Q 011005 354 TARLLHADSSNRTLLAGTYGYIAPELAYT-----MVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVL 428 (496)
Q Consensus 354 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~ 428 (496)
++..............++..|+|||.+.. ..++.++||||+|+++|+|++|+.||..... ........
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~-------~~~~~~~~ 231 (275)
T cd06608 159 VSAQLDSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHP-------MRALFKIP 231 (275)
T ss_pred cceecccchhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccch-------HHHHHHhh
Confidence 99766443333344568889999998754 3467899999999999999999999863221 11122222
Q ss_pred cCCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHH
Q 011005 429 DQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLI 474 (496)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~ 474 (496)
....+ .... .......+.+++.+||..||++|||+.|+++|+|.
T Consensus 232 ~~~~~-~~~~-~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~~~~ 275 (275)
T cd06608 232 RNPPP-TLKS-PENWSKKFNDFISECLIKNYEQRPFMEELLEHPFI 275 (275)
T ss_pred ccCCC-CCCc-hhhcCHHHHHHHHHHhhcChhhCcCHHHHhcCCCC
Confidence 21111 1111 11123357799999999999999999999999874
No 239
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=1.8e-38 Score=300.66 Aligned_cols=253 Identities=26% Similarity=0.403 Sum_probs=200.9
Q ss_pred hCCCCcceeeecCCeeEEEEEeC----CCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEE
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLP----NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLI 280 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV 280 (496)
++|++.+.||+|+||.||+|... .+..+|+|.+.........+.+.+|+.++++++||||+++++++..++..++|
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 83 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIV 83 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEE
Confidence 56888999999999999999753 23479999987654344456789999999999999999999999999999999
Q ss_pred EEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccC
Q 011005 281 YEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHA 360 (496)
Q Consensus 281 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 360 (496)
|||+++++|.+++.... ..+++.++..++.|++.|++||| +.+++||||||+||+++.++.++++|||++.....
T Consensus 84 ~e~~~~~~L~~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lH---~~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd05066 84 TEYMENGSLDAFLRKHD--GQFTVIQLVGMLRGIASGMKYLS---DMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLED 158 (267)
T ss_pred EEcCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHH---HCCEeehhhchhcEEECCCCeEEeCCCCccccccc
Confidence 99999999999997643 25799999999999999999999 78999999999999999999999999999987654
Q ss_pred CCCCc---cccccccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccCCCCCCcchhHhhhcCCCCCCC
Q 011005 361 DSSNR---TLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPV 436 (496)
Q Consensus 361 ~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (496)
..... ....++..|+|||.+.+..++.++|+||||+++|++++ |..||..... .......... ...+.
T Consensus 159 ~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~-------~~~~~~~~~~-~~~~~ 230 (267)
T cd05066 159 DPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSN-------QDVIKAIEEG-YRLPA 230 (267)
T ss_pred ccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCH-------HHHHHHHhCC-CcCCC
Confidence 32211 11223467999999998899999999999999999886 9999863321 1111111111 11111
Q ss_pred ChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHH
Q 011005 437 DRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFL 473 (496)
Q Consensus 437 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~ 473 (496)
.. ..+..+.+++.+|++.+|++||++.++++.+.
T Consensus 231 ~~---~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 264 (267)
T cd05066 231 PM---DCPAALHQLMLDCWQKDRNERPKFEQIVSILD 264 (267)
T ss_pred CC---CCCHHHHHHHHHHcccCchhCCCHHHHHHHHH
Confidence 11 11234679999999999999999999998864
No 240
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=1.9e-38 Score=305.54 Aligned_cols=270 Identities=25% Similarity=0.297 Sum_probs=206.0
Q ss_pred CCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchh----HHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEE
Q 011005 206 DFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEE----LAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLI 280 (496)
Q Consensus 206 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~----~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV 280 (496)
+|++.+.||+|+||.||+|... +++.||+|.+..... ......+..|++++++++|+||+++++++...+..++|
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV 80 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence 4778889999999999999764 689999999976432 22334567899999999999999999999999999999
Q ss_pred EEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccC
Q 011005 281 YEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHA 360 (496)
Q Consensus 281 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 360 (496)
|||+ +|+|.+++.... ..+++..+..++.||++||.||| ..+++|+||+|+||+++.++.++|+|||++.....
T Consensus 81 ~e~~-~~~L~~~i~~~~--~~~~~~~~~~~~~qi~~al~~lH---~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~ 154 (298)
T cd07841 81 FEFM-ETDLEKVIKDKS--IVLTPADIKSYMLMTLRGLEYLH---SNWILHRDLKPNNLLIASDGVLKLADFGLARSFGS 154 (298)
T ss_pred Eccc-CCCHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHH---hCCeeecCCChhhEEEcCCCCEEEccceeeeeccC
Confidence 9999 899999997643 36899999999999999999999 78999999999999999999999999999987755
Q ss_pred CCCCcccccccccccccccccc-CCcCcccchhhHHHHHHHHHhCCCCCccccccCC---------CCCCcc-----hhH
Q 011005 361 DSSNRTLLAGTYGYIAPELAYT-MVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSS---------SSDPKI-----MLI 425 (496)
Q Consensus 361 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~---------~~~~~~-----~~~ 425 (496)
.........+++.|+|||.+.+ ..++.++||||+|+++|+|++|..||........ ...... ...
T Consensus 155 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (298)
T cd07841 155 PNRKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLP 234 (298)
T ss_pred CCccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhccccc
Confidence 4333333456788999998865 4678899999999999999999887753221100 000000 000
Q ss_pred hhhcCCC--CCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCCCC
Q 011005 426 DVLDQRL--PPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTPLV 481 (496)
Q Consensus 426 ~~~~~~~--~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~~~ 481 (496)
....... ..+...........+.+++.+||++||++|||+.|+++|.|+.+.....
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~~~~~~~~~~~ 292 (298)
T cd07841 235 DYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEHPYFSNDPAPT 292 (298)
T ss_pred ccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhCccccCCCCCC
Confidence 0000000 0000000111234578999999999999999999999999998865443
No 241
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=2.7e-38 Score=306.71 Aligned_cols=262 Identities=23% Similarity=0.355 Sum_probs=204.8
Q ss_pred HhCCCCcceeeecCCeeEEEEEeC--------CCcEEEEEEcccchhHHHHHHHHHHHHHHHhh-cccccccccceeecC
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLP--------NGKVFALKKLHTSEELAFIKSFKNEAQVLSQV-LHRNIVKLYGYCLHK 274 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~ 274 (496)
.++|.+.+.||+|+||.||+|... ....+|+|.+...........+.+|+.+++++ +||||+++++++...
T Consensus 11 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 90 (314)
T cd05099 11 RDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQE 90 (314)
T ss_pred HHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccC
Confidence 467889999999999999999642 24578999987654444456788999999999 599999999999998
Q ss_pred CeEEEEEEecCCCChhhhhhCCCC-------------CccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEe
Q 011005 275 KCMFLIYEYMERGSLFCNLHNNED-------------AVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILL 341 (496)
Q Consensus 275 ~~~~lV~e~~~~g~L~~~l~~~~~-------------~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~ 341 (496)
...++||||+++|+|.+++..... ...+++.++..++.|++.||.||| +.|++||||||+||++
T Consensus 91 ~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH---~~gi~H~dlkp~Nill 167 (314)
T cd05099 91 GPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLE---SRRCIHRDLAARNVLV 167 (314)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHH---HCCeeeccccceeEEE
Confidence 899999999999999999875321 235889999999999999999999 7899999999999999
Q ss_pred cCCCCeEEccccccccccCCCCCc--cccccccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccCCCC
Q 011005 342 NSKLEAFVADFGTARLLHADSSNR--TLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSS 418 (496)
Q Consensus 342 ~~~~~~kl~Dfg~~~~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~ 418 (496)
+.++.+||+|||+++......... ....++..|+|||.+.+..++.++||||||+++|+|++ |..||....
T Consensus 168 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~------ 241 (314)
T cd05099 168 TEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIP------ 241 (314)
T ss_pred cCCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCC------
Confidence 999999999999998664322111 11224467999999999999999999999999999999 888885321
Q ss_pred CCcchhHhhhcCCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCC
Q 011005 419 DPKIMLIDVLDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTP 479 (496)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~ 479 (496)
. ....+.+......... ......+.+++.+||+.||++|||+.|+++.+.......
T Consensus 242 -~-~~~~~~~~~~~~~~~~---~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~~ 297 (314)
T cd05099 242 -V-EELFKLLREGHRMDKP---SNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLAAV 297 (314)
T ss_pred -H-HHHHHHHHcCCCCCCC---CCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHHh
Confidence 1 1111221111111111 111224678999999999999999999999988766543
No 242
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=1.7e-38 Score=300.93 Aligned_cols=256 Identities=25% Similarity=0.434 Sum_probs=203.4
Q ss_pred CCCCcceeeecCCeeEEEEEe-CCCcEEEEEEcccch-----hHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEE
Q 011005 206 DFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSE-----ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFL 279 (496)
Q Consensus 206 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-----~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 279 (496)
+|+..+.||+|+||.||+|.. .+++.||+|.+.... .....+.+.+|++++++++|+||+++++++.+.+..++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 80 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL 80 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence 477888999999999999965 578999999986532 12345678999999999999999999999999999999
Q ss_pred EEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCC-CeEEccccccccc
Q 011005 280 IYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKL-EAFVADFGTARLL 358 (496)
Q Consensus 280 V~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~-~~kl~Dfg~~~~~ 358 (496)
|+||+++++|.+++.... .+++..+..++.|++.||+||| +.+++|+||+|+||+++.++ .++|+|||.+...
T Consensus 81 v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~ql~~al~~LH---~~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~ 154 (268)
T cd06630 81 FVEWMAGGSVSHLLSKYG---AFKEAVIINYTEQLLRGLSYLH---ENQIIHRDVKGANLLIDSTGQRLRIADFGAAARL 154 (268)
T ss_pred EEeccCCCcHHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEEccccccccc
Confidence 999999999999987543 6788999999999999999999 78999999999999998776 5999999999876
Q ss_pred cCCCCC----ccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCC
Q 011005 359 HADSSN----RTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPP 434 (496)
Q Consensus 359 ~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (496)
...... .....++..|+|||.+.+..++.++||||+|+++|+|++|+.||..... ........+........
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~----~~~~~~~~~~~~~~~~~ 230 (268)
T cd06630 155 AAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKH----SNHLALIFKIASATTAP 230 (268)
T ss_pred ccccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCC----cchHHHHHHHhccCCCC
Confidence 543211 1234578899999999988999999999999999999999999863221 11111111111111111
Q ss_pred CCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHH
Q 011005 435 PVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLI 474 (496)
Q Consensus 435 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~ 474 (496)
... ......+.+++.+||..+|++||++.|+++|+|+
T Consensus 231 ~~~---~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~~~~~ 267 (268)
T cd06630 231 SIP---EHLSPGLRDVTLRCLELQPEDRPPSRELLKHPVF 267 (268)
T ss_pred CCc---hhhCHHHHHHHHHHcCCCcccCcCHHHHhcCccc
Confidence 111 1122357789999999999999999999999986
No 243
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=5.5e-40 Score=287.39 Aligned_cols=261 Identities=23% Similarity=0.312 Sum_probs=208.9
Q ss_pred CCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchhHHHHHHHHHHHHHHHhhc-ccccccccceeecCCeEEEEEEec
Q 011005 207 FDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVL-HRNIVKLYGYCLHKKCMFLIYEYM 284 (496)
Q Consensus 207 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lV~e~~ 284 (496)
.+....||.|.-|.||++.+. .|...|||.+....+.+..+++...+.++..-+ +|.||+.+|||..+...++.||.|
T Consensus 94 l~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMelM 173 (391)
T KOG0983|consen 94 LENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMELM 173 (391)
T ss_pred hhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHHH
Confidence 444566999999999999765 589999999998877777788888888887775 899999999999999999999988
Q ss_pred CCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCCC
Q 011005 285 ERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSN 364 (496)
Q Consensus 285 ~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 364 (496)
. .....++..... .+++.-+-++...+++||.||.+ +++|+|||+||+|||+|+.|++|+||||.+-++.+. ..
T Consensus 174 s-~C~ekLlkrik~--piPE~ilGk~tva~v~AL~YLKe--KH~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdS-kA 247 (391)
T KOG0983|consen 174 S-TCAEKLLKRIKG--PIPERILGKMTVAIVKALYYLKE--KHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDS-KA 247 (391)
T ss_pred H-HHHHHHHHHhcC--CchHHhhhhhHHHHHHHHHHHHH--hcceeecccCccceEEccCCCEEeecccccceeecc-cc
Confidence 4 366666654432 57777777899999999999998 669999999999999999999999999999877543 33
Q ss_pred ccccccccccccccccccC---CcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHH
Q 011005 365 RTLLAGTYGYIAPELAYTM---VMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVI 441 (496)
Q Consensus 365 ~~~~~gt~~y~aPE~~~~~---~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (496)
.+...|-+.|||||.+... .|+.++||||||++++||.||+.||..- .........+++...+.-... .
T Consensus 248 htrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c------~tdFe~ltkvln~ePP~L~~~--~ 319 (391)
T KOG0983|consen 248 HTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGC------KTDFEVLTKVLNEEPPLLPGH--M 319 (391)
T ss_pred cccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCC------CccHHHHHHHHhcCCCCCCcc--c
Confidence 4445788899999998754 6888999999999999999999999632 223334444444333211111 1
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCCCC
Q 011005 442 RDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTPLV 481 (496)
Q Consensus 442 ~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~~~ 481 (496)
.-...+.+++..||.+|+.+||...++++|+|+..+.+.+
T Consensus 320 gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h~Fi~~ye~a~ 359 (391)
T KOG0983|consen 320 GFSPDFQSFVKDCLTKDHRKRPKYNKLLEHPFIKRYETAE 359 (391)
T ss_pred CcCHHHHHHHHHHhhcCcccCcchHHHhcCcceeecchhh
Confidence 1223478899999999999999999999999999887765
No 244
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=1.6e-38 Score=301.33 Aligned_cols=249 Identities=25% Similarity=0.348 Sum_probs=188.5
Q ss_pred eeeecCCeeEEEEEeCC---CcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEecCCCC
Q 011005 212 CIGTGGYGSVYKAQLPN---GKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEYMERGS 288 (496)
Q Consensus 212 ~lg~G~~g~Vy~~~~~~---~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~~~~g~ 288 (496)
.||+|+||.||+|...+ +..+|+|.+...........+.+|+.++++++||||+++++++.+....++||||+++|+
T Consensus 2 ~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~ 81 (269)
T cd05087 2 EIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLGD 81 (269)
T ss_pred cccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCCc
Confidence 58999999999997543 457999998765544444678899999999999999999999999889999999999999
Q ss_pred hhhhhhCCCC--CccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCC--C
Q 011005 289 LFCNLHNNED--AVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSS--N 364 (496)
Q Consensus 289 L~~~l~~~~~--~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~--~ 364 (496)
|.+++..... ....++..+..++.|++.|++||| +.+++|+||||+||+++.++.++|+|||++........ .
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~ 158 (269)
T cd05087 82 LKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLH---KNNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYVT 158 (269)
T ss_pred HHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHH---HCCEeccccCcceEEEcCCCcEEECCccccccccCcceeec
Confidence 9999875432 224567788889999999999999 78999999999999999999999999999975433221 1
Q ss_pred ccccccccccccccccccC-------CcCcccchhhHHHHHHHHHh-CCCCCccccccCCCCCCcchhHhhhcC--CCCC
Q 011005 365 RTLLAGTYGYIAPELAYTM-------VMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSSDPKIMLIDVLDQ--RLPP 434 (496)
Q Consensus 365 ~~~~~gt~~y~aPE~~~~~-------~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 434 (496)
.....++..|+|||++.+. .++.++||||||+++|||++ |+.||..... ........... ..+.
T Consensus 159 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~------~~~~~~~~~~~~~~~~~ 232 (269)
T cd05087 159 PDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSD------EQVLTYTVREQQLKLPK 232 (269)
T ss_pred CCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCCh------HHHHHHHhhcccCCCCC
Confidence 1234567889999988642 35789999999999999996 9999863221 11111111111 1111
Q ss_pred CCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHH
Q 011005 435 PVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEF 472 (496)
Q Consensus 435 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~ 472 (496)
+... ......+.+++..|+ .+|++|||++|+++.+
T Consensus 233 ~~~~--~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l 267 (269)
T cd05087 233 PRLK--LPLSDRWYEVMQFCW-LQPEQRPSAEEVHLLL 267 (269)
T ss_pred CccC--CCCChHHHHHHHHHh-cCcccCCCHHHHHHHh
Confidence 1110 011223667888998 6899999999998764
No 245
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=2.1e-38 Score=303.73 Aligned_cols=256 Identities=27% Similarity=0.426 Sum_probs=202.5
Q ss_pred HhCCCCcceeeecCCeeEEEEEeC------CCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeE
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLP------NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCM 277 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 277 (496)
.++|++.+.||+|+||.||+|..+ ++..||+|.+.........+.+.+|+.++++++||||+++++++..+...
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~ 83 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPM 83 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCcc
Confidence 467899999999999999999753 46789999987655444557789999999999999999999999999999
Q ss_pred EEEEEecCCCChhhhhhCCC-------------------CCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCc
Q 011005 278 FLIYEYMERGSLFCNLHNNE-------------------DAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNN 338 (496)
Q Consensus 278 ~lV~e~~~~g~L~~~l~~~~-------------------~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~N 338 (496)
++||||+++|+|.+++.... ....+++..++.++.|++.||+||| ..+++||||||+|
T Consensus 84 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH---~~~i~H~dl~p~n 160 (288)
T cd05050 84 CLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLS---ERKFVHRDLATRN 160 (288)
T ss_pred EEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHH---hCCeecccccHhh
Confidence 99999999999999986421 1124788889999999999999999 7799999999999
Q ss_pred eEecCCCCeEEccccccccccCCCC--CccccccccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccC
Q 011005 339 ILLNSKLEAFVADFGTARLLHADSS--NRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLS 415 (496)
Q Consensus 339 il~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~ 415 (496)
|+++.++.++|+|||++........ .......+..|+|||.+.+..++.++||||||+++|||++ |..||....
T Consensus 161 il~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~--- 237 (288)
T cd05050 161 CLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMA--- 237 (288)
T ss_pred eEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCC---
Confidence 9999999999999999876533221 1122334667999999998999999999999999999997 888875221
Q ss_pred CCCCCcchhHhhhcCCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHH
Q 011005 416 SSSDPKIMLIDVLDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFL 473 (496)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~ 473 (496)
.................. .....+.+++.+||+.||++|||+.|+++.+.
T Consensus 238 ----~~~~~~~~~~~~~~~~~~----~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~ 287 (288)
T cd05050 238 ----HEEVIYYVRDGNVLSCPD----NCPLELYNLMRLCWSKLPSDRPSFASINRILQ 287 (288)
T ss_pred ----HHHHHHHHhcCCCCCCCC----CCCHHHHHHHHHHcccCcccCCCHHHHHHHhh
Confidence 111112222222211111 11235788999999999999999999998763
No 246
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=3.3e-38 Score=297.73 Aligned_cols=251 Identities=25% Similarity=0.431 Sum_probs=199.5
Q ss_pred hCCCCcceeeecCCeeEEEEEeCCCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEec
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEYM 284 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~~ 284 (496)
++|.+.+.||+|++|.||+|..+.+..+|+|.+..... ..+.+.+|+.++++++|+|++++++++.. +..++||||+
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~~--~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~~ 82 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGTM--MPEAFLQEAQIMKKLRHDKLVPLYAVVSE-EPIYIVTEFM 82 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCCc--cHHHHHHHHHHHHhCCCCCeeeEEEEEcC-CCcEEEEEcC
Confidence 56888999999999999999888777899998865432 23567889999999999999999998754 5578999999
Q ss_pred CCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCCC
Q 011005 285 ERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSN 364 (496)
Q Consensus 285 ~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 364 (496)
++++|.+++.... ...+++..+..++.|++.||+||| +.+++|+||+|+||++++++.++|+|||.+.........
T Consensus 83 ~~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~al~~lH---~~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~ 158 (260)
T cd05069 83 GKGSLLDFLKEGD-GKYLKLPQLVDMAAQIADGMAYIE---RMNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYT 158 (260)
T ss_pred CCCCHHHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHH---hCCEeecccCcceEEEcCCCeEEECCCccceEccCCccc
Confidence 9999999997643 235789999999999999999999 779999999999999999999999999999766433221
Q ss_pred -ccccccccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHHH
Q 011005 365 -RTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVIR 442 (496)
Q Consensus 365 -~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (496)
.....++..|+|||...+..++.++||||||+++|+|++ |+.||.... ....... +......+... .
T Consensus 159 ~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~-------~~~~~~~-~~~~~~~~~~~---~ 227 (260)
T cd05069 159 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMV-------NREVLEQ-VERGYRMPCPQ---G 227 (260)
T ss_pred ccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCC-------HHHHHHH-HHcCCCCCCCc---c
Confidence 122345678999999998899999999999999999999 899986321 1111111 22221111111 1
Q ss_pred HHHHHHHHHHhcccCCCCCCCCHHHHHHHHH
Q 011005 443 DILLISTVSFACLQSNPKSRPTMQSVSQEFL 473 (496)
Q Consensus 443 ~~~~l~~li~~cl~~dP~~Rps~~evl~~~~ 473 (496)
....+.+++.+||..||++||+++++++.+.
T Consensus 228 ~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 258 (260)
T cd05069 228 CPESLHELMKLCWKKDPDERPTFEYIQSFLE 258 (260)
T ss_pred cCHHHHHHHHHHccCCcccCcCHHHHHHHHh
Confidence 2345789999999999999999999998764
No 247
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=2.9e-38 Score=297.56 Aligned_cols=245 Identities=24% Similarity=0.374 Sum_probs=193.3
Q ss_pred eeeecCCeeEEEEEe---CCCcEEEEEEcccch-hHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEecCCC
Q 011005 212 CIGTGGYGSVYKAQL---PNGKVFALKKLHTSE-ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEYMERG 287 (496)
Q Consensus 212 ~lg~G~~g~Vy~~~~---~~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~~~~g 287 (496)
.||+|+||.||+|.+ ++++.+|+|++.... .....+.+.+|+.+++.++|+||+++++++. .+..++||||+++|
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~~ 80 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAELG 80 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCCC
Confidence 589999999999964 357889999986543 2334567889999999999999999999875 44678999999999
Q ss_pred ChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCCC---
Q 011005 288 SLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSN--- 364 (496)
Q Consensus 288 ~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~--- 364 (496)
+|.+++.... .+++..+..++.|++.||+||| +++++||||||+||+++.++.++|+|||++.........
T Consensus 81 ~L~~~l~~~~---~~~~~~~~~i~~qi~~al~~lH---~~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~ 154 (257)
T cd05116 81 PLNKFLQKNK---HVTEKNITELVHQVSMGMKYLE---ETNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKA 154 (257)
T ss_pred cHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---HCCEeecccchhhEEEcCCCeEEECCCccccccCCCCCeeee
Confidence 9999987543 6889999999999999999999 789999999999999999999999999999876443221
Q ss_pred ccccccccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHHHH
Q 011005 365 RTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVIRD 443 (496)
Q Consensus 365 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 443 (496)
.....++..|+|||.+....++.++||||||+++|||++ |+.||..... . .....+......+... ..
T Consensus 155 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~-------~-~~~~~i~~~~~~~~~~---~~ 223 (257)
T cd05116 155 KTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKG-------N-EVTQMIESGERMECPQ---RC 223 (257)
T ss_pred cCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCH-------H-HHHHHHHCCCCCCCCC---CC
Confidence 112234578999999988889999999999999999998 9999863221 1 1222222211111111 12
Q ss_pred HHHHHHHHHhcccCCCCCCCCHHHHHHHHHH
Q 011005 444 ILLISTVSFACLQSNPKSRPTMQSVSQEFLI 474 (496)
Q Consensus 444 ~~~l~~li~~cl~~dP~~Rps~~evl~~~~~ 474 (496)
...+.+++.+||+.||++||++++|.+.+..
T Consensus 224 ~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~ 254 (257)
T cd05116 224 PPEMYDLMKLCWTYGVDERPGFAVVELRLRN 254 (257)
T ss_pred CHHHHHHHHHHhccCchhCcCHHHHHHHHhc
Confidence 2357799999999999999999999888753
No 248
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=3.7e-38 Score=308.39 Aligned_cols=261 Identities=23% Similarity=0.358 Sum_probs=204.6
Q ss_pred hCCCCcceeeecCCeeEEEEEeC--------CCcEEEEEEcccchhHHHHHHHHHHHHHHHhh-cccccccccceeecCC
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLP--------NGKVFALKKLHTSEELAFIKSFKNEAQVLSQV-LHRNIVKLYGYCLHKK 275 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~ 275 (496)
.+|++.+.||+|+||.||+|... .+..||+|.+.........+.+.+|+.+++++ +|+||+++++++...+
T Consensus 12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 91 (334)
T cd05100 12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG 91 (334)
T ss_pred hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCC
Confidence 46899999999999999999642 12368999887654444557889999999999 7999999999999999
Q ss_pred eEEEEEEecCCCChhhhhhCCC-------------CCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEec
Q 011005 276 CMFLIYEYMERGSLFCNLHNNE-------------DAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLN 342 (496)
Q Consensus 276 ~~~lV~e~~~~g~L~~~l~~~~-------------~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~ 342 (496)
..++++||+++|+|.+++.... ....+++..+..++.|++.||+||| ..+++||||||+||+++
T Consensus 92 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH---~~givH~dlkp~Nill~ 168 (334)
T cd05100 92 PLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLA---SQKCIHRDLAARNVLVT 168 (334)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHH---HCCeeccccccceEEEc
Confidence 9999999999999999987532 1235788999999999999999999 78999999999999999
Q ss_pred CCCCeEEccccccccccCCCCC--ccccccccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccCCCCC
Q 011005 343 SKLEAFVADFGTARLLHADSSN--RTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSSD 419 (496)
Q Consensus 343 ~~~~~kl~Dfg~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~~ 419 (496)
.++.++|+|||+++........ .....++..|+|||.+.+..++.++||||||+++|||++ |..||....
T Consensus 169 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~------- 241 (334)
T cd05100 169 EDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIP------- 241 (334)
T ss_pred CCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCC-------
Confidence 9999999999999765432211 111234567999999999999999999999999999998 888885321
Q ss_pred CcchhHhhhcCCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCC
Q 011005 420 PKIMLIDVLDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTP 479 (496)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~ 479 (496)
.......+.......... .....+.+++.+||+.+|++|||+.|+++++.......
T Consensus 242 -~~~~~~~~~~~~~~~~~~---~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~~~ 297 (334)
T cd05100 242 -VEELFKLLKEGHRMDKPA---NCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLTVT 297 (334)
T ss_pred -HHHHHHHHHcCCCCCCCC---CCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhhhc
Confidence 111222121111111111 11224778999999999999999999999998766433
No 249
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=3.9e-38 Score=299.24 Aligned_cols=254 Identities=25% Similarity=0.369 Sum_probs=194.1
Q ss_pred CCCcceeeecCCeeEEEEEeCCC-c--EEEEEEcccch-hHHHHHHHHHHHHHHHhhcccccccccceeecC------Ce
Q 011005 207 FDIRYCIGTGGYGSVYKAQLPNG-K--VFALKKLHTSE-ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHK------KC 276 (496)
Q Consensus 207 ~~~~~~lg~G~~g~Vy~~~~~~~-~--~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~------~~ 276 (496)
|.+.+.||+|+||.||+|.+.+. . .||+|.++... .....+.+.+|+.+++.++|+||+++++++... ..
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 80 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPS 80 (272)
T ss_pred CccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCC
Confidence 35678899999999999976543 2 58999886542 233456788999999999999999999987532 24
Q ss_pred EEEEEEecCCCChhhhhhCCC---CCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEcccc
Q 011005 277 MFLIYEYMERGSLFCNLHNNE---DAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFG 353 (496)
Q Consensus 277 ~~lV~e~~~~g~L~~~l~~~~---~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg 353 (496)
.+++|||+++|+|.+++.... ....+++..+..++.|++.||+||| .++|+||||||+||++++++.++|+|||
T Consensus 81 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg 157 (272)
T cd05075 81 PVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLS---SKSFIHRDLAARNCMLNENMNVCVADFG 157 (272)
T ss_pred cEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHH---HCCeeccccchhheEEcCCCCEEECCCC
Confidence 689999999999988874321 2235789999999999999999999 7899999999999999999999999999
Q ss_pred ccccccCCCCC--ccccccccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccCCCCCCcchhHhhhcC
Q 011005 354 TARLLHADSSN--RTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSSDPKIMLIDVLDQ 430 (496)
Q Consensus 354 ~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 430 (496)
+++........ .....+++.|+|||.+.+..++.++||||||+++|||++ |+.||..... ..........
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~-------~~~~~~~~~~ 230 (272)
T cd05075 158 LSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVEN-------SEIYDYLRQG 230 (272)
T ss_pred cccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCH-------HHHHHHHHcC
Confidence 99876433211 122345678999999999999999999999999999999 8889863211 1111111111
Q ss_pred CCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHH
Q 011005 431 RLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLI 474 (496)
Q Consensus 431 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~ 474 (496)
....... .....+.+++.+||+.||++|||+.++++.+..
T Consensus 231 ~~~~~~~----~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~ 270 (272)
T cd05075 231 NRLKQPP----DCLDGLYSLMSSCWLLNPKDRPSFETLRCELEK 270 (272)
T ss_pred CCCCCCC----CCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHh
Confidence 1111111 112246799999999999999999999998753
No 250
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=1.1e-38 Score=306.08 Aligned_cols=266 Identities=23% Similarity=0.245 Sum_probs=199.0
Q ss_pred HHhCCCCcceeeecCCeeEEEEEe-CCCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEE
Q 011005 203 ATEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIY 281 (496)
Q Consensus 203 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~ 281 (496)
++++|.+.+.||+|+||.||+|.. .+++.||+|.+...........+.+|+.+++.++|+||+++++++..++..++||
T Consensus 3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~ 82 (291)
T cd07870 3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVF 82 (291)
T ss_pred ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEE
Confidence 356799999999999999999965 4688999999865443333345678999999999999999999999999999999
Q ss_pred EecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCC
Q 011005 282 EYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHAD 361 (496)
Q Consensus 282 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 361 (496)
||+. +++.+.+.... ..+++..+..++.|++.||.||| ..+++|+||||+||+++.++.++|+|||+++.....
T Consensus 83 e~~~-~~l~~~~~~~~--~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~ 156 (291)
T cd07870 83 EYMH-TDLAQYMIQHP--GGLHPYNVRLFMFQLLRGLAYIH---GQHILHRDLKPQNLLISYLGELKLADFGLARAKSIP 156 (291)
T ss_pred eccc-CCHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChHHEEEcCCCcEEEeccccccccCCC
Confidence 9996 67776665432 25678888899999999999999 779999999999999999999999999999765433
Q ss_pred CCCccccccccccccccccccC-CcCcccchhhHHHHHHHHHhCCCCCccccccCC----------CCCCcc--------
Q 011005 362 SSNRTLLAGTYGYIAPELAYTM-VMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSS----------SSDPKI-------- 422 (496)
Q Consensus 362 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~----------~~~~~~-------- 422 (496)
........+++.|+|||.+.+. .++.++||||+|+++|+|++|+.||+....... ......
T Consensus 157 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (291)
T cd07870 157 SQTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLP 236 (291)
T ss_pred CCCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhcc
Confidence 3333344578899999998764 578899999999999999999999964321000 000000
Q ss_pred -hhHhhhcCCCCCCCChh--HHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHH
Q 011005 423 -MLIDVLDQRLPPPVDRK--VIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLI 474 (496)
Q Consensus 423 -~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~ 474 (496)
..........+...... .......+.+++.+|+..||++|||++|++.|+|+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h~~~ 291 (291)
T cd07870 237 NYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLHPYF 291 (291)
T ss_pred cccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhcCCCC
Confidence 00000000000000000 00112356789999999999999999999999875
No 251
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=7.3e-39 Score=306.26 Aligned_cols=257 Identities=24% Similarity=0.308 Sum_probs=198.8
Q ss_pred CCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchh-HHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEe
Q 011005 206 DFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEE-LAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEY 283 (496)
Q Consensus 206 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~ 283 (496)
+|+..+.||+|++|.||+|..+ +++.||+|.+..... ......+.+|++++++++||||+++++++..++..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 80 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeec
Confidence 4788899999999999999764 689999998875432 22235678999999999999999999999999999999999
Q ss_pred cCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCC
Q 011005 284 MERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSS 363 (496)
Q Consensus 284 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 363 (496)
+. ++|.+++.... ...+++..+..++.|++.||+||| ..+++|+||+|+||+++.++.++|+|||++........
T Consensus 81 ~~-~~l~~~~~~~~-~~~l~~~~~~~~~~~i~~~l~~lh---~~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~ 155 (284)
T cd07860 81 LH-QDLKKFMDASP-LSGIPLPLIKSYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR 155 (284)
T ss_pred cc-cCHHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEEeeccchhhcccCcc
Confidence 96 58888886543 236899999999999999999999 77999999999999999999999999999976644333
Q ss_pred CccccccccccccccccccCC-cCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhc-------------
Q 011005 364 NRTLLAGTYGYIAPELAYTMV-MTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLD------------- 429 (496)
Q Consensus 364 ~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~------------- 429 (496)
......+++.|+|||.+.+.. ++.++||||||+++|+|+||+.||...... ........
T Consensus 156 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~ 228 (284)
T cd07860 156 TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI-------DQLFRIFRTLGTPDEVVWPGV 228 (284)
T ss_pred ccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHH-------HHHHHHHHHhCCCChhhhhhh
Confidence 333345688999999887654 588999999999999999999998532110 00000000
Q ss_pred -------CCCCC----CCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHH
Q 011005 430 -------QRLPP----PVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLI 474 (496)
Q Consensus 430 -------~~~~~----~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~ 474 (496)
...+. ............+.+++.+||+.||++|||++|+++|+|+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~f 284 (284)
T cd07860 229 TSLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAHPFF 284 (284)
T ss_pred hHHHHHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcCCCC
Confidence 00000 0000000012346789999999999999999999999885
No 252
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=2.6e-38 Score=299.00 Aligned_cols=255 Identities=31% Similarity=0.447 Sum_probs=204.0
Q ss_pred CCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchh-HHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEe
Q 011005 206 DFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEE-LAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEY 283 (496)
Q Consensus 206 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~ 283 (496)
+|++.+.||+|+||.||+|... +++.|++|.++.... ....+.+.+|+.++++++|+||+++++.+...+..++|+||
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEY 80 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEec
Confidence 5788899999999999999754 788999999876543 24567889999999999999999999999999999999999
Q ss_pred cCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCC
Q 011005 284 MERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSS 363 (496)
Q Consensus 284 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 363 (496)
+++++|.+++.... .+++..+..++.|++.|+.||| +.+++|+||+|+||++++++.++|+|||++........
T Consensus 81 ~~~~~L~~~~~~~~---~~~~~~~~~i~~~i~~~l~~lh---~~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~ 154 (264)
T cd06626 81 CSGGTLEELLEHGR---ILDEHVIRVYTLQLLEGLAYLH---SHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTT 154 (264)
T ss_pred CCCCcHHHHHhhcC---CCChHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEcccccccccCCCCC
Confidence 99999999987643 4788899999999999999999 78999999999999999999999999999987654332
Q ss_pred Ccc----ccccccccccccccccCC---cCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCC
Q 011005 364 NRT----LLAGTYGYIAPELAYTMV---MTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPV 436 (496)
Q Consensus 364 ~~~----~~~gt~~y~aPE~~~~~~---~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (496)
... ...+++.|+|||++.+.. ++.++||||||+++|++++|+.||.... ..............+ ..
T Consensus 155 ~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~------~~~~~~~~~~~~~~~-~~ 227 (264)
T cd06626 155 TMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELD------NEFQIMFHVGAGHKP-PI 227 (264)
T ss_pred cccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCc------chHHHHHHHhcCCCC-CC
Confidence 211 245788999999998776 8899999999999999999999996332 111111111111111 11
Q ss_pred ChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHH
Q 011005 437 DRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLI 474 (496)
Q Consensus 437 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~ 474 (496)
.. .......+.+++.+||+.+|++|||+.|++.|+|.
T Consensus 228 ~~-~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~~~~ 264 (264)
T cd06626 228 PD-SLQLSPEGKDFLDRCLESDPKKRPTASELLQHPFV 264 (264)
T ss_pred Cc-ccccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence 00 11112346789999999999999999999999873
No 253
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=2.5e-38 Score=299.07 Aligned_cols=258 Identities=24% Similarity=0.380 Sum_probs=205.3
Q ss_pred CCCCcceeeecCCeeEEEEEe-CCCcEEEEEEcccch-hHHHHHHHHHHHHHHHhhcccccccccceeec--CCeEEEEE
Q 011005 206 DFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSE-ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLH--KKCMFLIY 281 (496)
Q Consensus 206 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~--~~~~~lV~ 281 (496)
+|++.+.||.|+||.||+|.. .+++.||+|.+.... .....+.+.+|++++++++|+||+++++++.. +...+++|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM 80 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence 478889999999999999965 468899999886532 23344678899999999999999999998754 45689999
Q ss_pred EecCCCChhhhhhCC-CCCccCCHHHHHHHHHHHHHHHHHHHhCC--CCCeEEeCCCCCceEecCCCCeEEccccccccc
Q 011005 282 EYMERGSLFCNLHNN-EDAVELDWAKRVNIVKAMAHALAYLHHDC--SPSIIHRDISSNNILLNSKLEAFVADFGTARLL 358 (496)
Q Consensus 282 e~~~~g~L~~~l~~~-~~~~~~~~~~~~~i~~~i~~~l~~lh~~~--~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 358 (496)
||+++++|.+++... .....+++..++.++.|++.||.|||..+ +.+++|+||+|+||+++.++.++|+|||++...
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~ 160 (265)
T cd08217 81 EYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKIL 160 (265)
T ss_pred hhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEecccccccc
Confidence 999999999998653 22346899999999999999999999432 468999999999999999999999999999877
Q ss_pred cCCCCCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCCh
Q 011005 359 HADSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDR 438 (496)
Q Consensus 359 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (496)
...........+++.|+|||.+.+..++.++|+||||+++|+|++|+.||.... .. ...+.+..........
T Consensus 161 ~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~-------~~-~~~~~~~~~~~~~~~~ 232 (265)
T cd08217 161 GHDSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARN-------QL-QLASKIKEGKFRRIPY 232 (265)
T ss_pred cCCcccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcC-------HH-HHHHHHhcCCCCCCcc
Confidence 544432344568999999999999999999999999999999999999986321 11 1222222222111111
Q ss_pred hHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHH
Q 011005 439 KVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLI 474 (496)
Q Consensus 439 ~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~ 474 (496)
.....+.+++.+|++.+|++||++.++++|+|.
T Consensus 233 ---~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~~~~ 265 (265)
T cd08217 233 ---RYSSELNEVIKSMLNVDPDKRPSTEELLQLPLI 265 (265)
T ss_pred ---ccCHHHHHHHHHHccCCcccCCCHHHHhhCCCC
Confidence 223457799999999999999999999999873
No 254
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=4.4e-38 Score=298.96 Aligned_cols=254 Identities=23% Similarity=0.372 Sum_probs=197.8
Q ss_pred CCCcceeeecCCeeEEEEEeCC----CcEEEEEEcccch-hHHHHHHHHHHHHHHHhhcccccccccceeecCCe-----
Q 011005 207 FDIRYCIGTGGYGSVYKAQLPN----GKVFALKKLHTSE-ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKC----- 276 (496)
Q Consensus 207 ~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~----- 276 (496)
|.+.+.||+|+||.||+|.... +..||+|.++... .......+.+|+..++.++|+||+++++++.....
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 5678899999999999997642 3679999987543 23345678999999999999999999998866554
Q ss_pred -EEEEEEecCCCChhhhhhCCC---CCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccc
Q 011005 277 -MFLIYEYMERGSLFCNLHNNE---DAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADF 352 (496)
Q Consensus 277 -~~lV~e~~~~g~L~~~l~~~~---~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Df 352 (496)
.++|+||+++|+|..++.... ....+++..+..++.|++.||+||| +.+++||||||+||++++++.+||+||
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~df 157 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLS---NRNFIHRDLAARNCMLREDMTVCVADF 157 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHH---hCCeeccccchheEEECCCCeEEECCc
Confidence 789999999999998885432 2236899999999999999999999 779999999999999999999999999
Q ss_pred cccccccCCCCC--ccccccccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccCCCCCCcchhHhhhc
Q 011005 353 GTARLLHADSSN--RTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSSDPKIMLIDVLD 429 (496)
Q Consensus 353 g~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~ 429 (496)
|+++........ .....++..|+|||.+.+..++.++||||||+++|||++ |..||.... ..........
T Consensus 158 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~-------~~~~~~~~~~ 230 (273)
T cd05035 158 GLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVE-------NHEIYDYLRH 230 (273)
T ss_pred cceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCC-------HHHHHHHHHc
Confidence 999876433221 112234668999999998899999999999999999999 888885322 1111111121
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHH
Q 011005 430 QRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLI 474 (496)
Q Consensus 430 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~ 474 (496)
.... .... .....+.+++.+||+.||++|||+.|+++++..
T Consensus 231 ~~~~-~~~~---~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~ 271 (273)
T cd05035 231 GNRL-KQPE---DCLDELYDLMYSCWRADPKDRPTFTKLREVLEN 271 (273)
T ss_pred CCCC-CCCc---CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHh
Confidence 1111 1111 122357899999999999999999999998753
No 255
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=2e-38 Score=303.04 Aligned_cols=260 Identities=25% Similarity=0.368 Sum_probs=199.5
Q ss_pred hCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchhHHHHHHHHHHHHH-HHhhcccccccccceeecCCeEEEEEE
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFKNEAQV-LSQVLHRNIVKLYGYCLHKKCMFLIYE 282 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~-l~~l~h~niv~~~~~~~~~~~~~lV~e 282 (496)
++|++.+.||+|+||.||+|..+ +|+.||+|.+...........+..|+.. ++..+||||+++++++..++..++|||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e 80 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICME 80 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhh
Confidence 36888999999999999999765 6999999998765332223455556665 555689999999999999999999999
Q ss_pred ecCCCChhhhhhCC-CCCccCCHHHHHHHHHHHHHHHHHHHhCCCC-CeEEeCCCCCceEecCCCCeEEccccccccccC
Q 011005 283 YMERGSLFCNLHNN-EDAVELDWAKRVNIVKAMAHALAYLHHDCSP-SIIHRDISSNNILLNSKLEAFVADFGTARLLHA 360 (496)
Q Consensus 283 ~~~~g~L~~~l~~~-~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~-~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 360 (496)
|++ |+|.+.+... .....+++..++.++.||+.||+||| ++ +++||||||+||+++.++.+||+|||++.....
T Consensus 81 ~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~ 156 (283)
T cd06617 81 VMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLH---SKLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVD 156 (283)
T ss_pred hhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHh---hcCCeecCCCCHHHEEECCCCCEEEeeccccccccc
Confidence 997 5887777542 22346899999999999999999999 54 899999999999999999999999999976543
Q ss_pred CCCCcccccccccccccccccc----CCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCC
Q 011005 361 DSSNRTLLAGTYGYIAPELAYT----MVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPV 436 (496)
Q Consensus 361 ~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (496)
.. ......++..|+|||.+.+ ..++.++|+||+|+++|+|++|+.||.... ..............+...
T Consensus 157 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~------~~~~~~~~~~~~~~~~~~ 229 (283)
T cd06617 157 SV-AKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWK------TPFQQLKQVVEEPSPQLP 229 (283)
T ss_pred cc-ccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccc------cCHHHHHHHHhcCCCCCC
Confidence 21 2233467889999998865 446889999999999999999999985311 111112222221111111
Q ss_pred ChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccC
Q 011005 437 DRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKT 478 (496)
Q Consensus 437 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~ 478 (496)
.. .....+.+++.+||..+|++||++.++++|+|+....
T Consensus 230 ~~---~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~ 268 (283)
T cd06617 230 AE---KFSPEFQDFVNKCLKKNYKERPNYPELLQHPFFELHL 268 (283)
T ss_pred cc---ccCHHHHHHHHHHccCChhhCcCHHHHhcCchhhhcc
Confidence 01 1123477899999999999999999999999998864
No 256
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=5.6e-38 Score=295.43 Aligned_cols=249 Identities=24% Similarity=0.416 Sum_probs=202.3
Q ss_pred HhCCCCcceeeecCCeeEEEEEeCCCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEe
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEY 283 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~ 283 (496)
.++|++.+.||.|+||.||+|... ++.||+|.+..... ..+.+.+|+.++++++|+||+++++++......++||||
T Consensus 5 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 81 (256)
T cd05039 5 SKELKLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDST--AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEY 81 (256)
T ss_pred hhhccceeeeecCCCceEEEEEec-CcEEEEEEeccchh--HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEe
Confidence 357889999999999999999874 78899999976653 346789999999999999999999999998899999999
Q ss_pred cCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCC
Q 011005 284 MERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSS 363 (496)
Q Consensus 284 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 363 (496)
+++++|.+++..... ..+++..+..++.|++.||.||| ..+++|+||||+||+++.++.++|+|||.++......
T Consensus 82 ~~~~~L~~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lh---~~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~- 156 (256)
T cd05039 82 MAKGSLVDYLRSRGR-AVITLAQQLGFALDVCEGMEYLE---EKNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQ- 156 (256)
T ss_pred cCCCcHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHH---hCCccchhcccceEEEeCCCCEEEccccccccccccc-
Confidence 999999999876432 25899999999999999999999 7899999999999999999999999999998763221
Q ss_pred CccccccccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHHH
Q 011005 364 NRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVIR 442 (496)
Q Consensus 364 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (496)
.....+..|+|||.+.+..++.++||||+|+++|++++ |..||.... .................. .
T Consensus 157 --~~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~--------~~~~~~~~~~~~~~~~~~---~ 223 (256)
T cd05039 157 --DSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP--------LKDVVPHVEKGYRMEAPE---G 223 (256)
T ss_pred --ccCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCC--------HHHHHHHHhcCCCCCCcc---C
Confidence 12334567999999998889999999999999999997 999985321 111112211111111111 1
Q ss_pred HHHHHHHHHHhcccCCCCCCCCHHHHHHHHH
Q 011005 443 DILLISTVSFACLQSNPKSRPTMQSVSQEFL 473 (496)
Q Consensus 443 ~~~~l~~li~~cl~~dP~~Rps~~evl~~~~ 473 (496)
.+..+.+++.+||..+|++|||+.|+++.+.
T Consensus 224 ~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 254 (256)
T cd05039 224 CPPEVYKVMKDCWELDPAKRPTFKQLREQLA 254 (256)
T ss_pred CCHHHHHHHHHHhccChhhCcCHHHHHHHHh
Confidence 1235779999999999999999999999874
No 257
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-39 Score=286.89 Aligned_cols=269 Identities=25% Similarity=0.331 Sum_probs=217.5
Q ss_pred HHhCCCCc-ceeeecCCeeEEEEEeC-CCcEEEEEEcccchhHHHHHHHHHHHHHHHhh-cccccccccceeec----CC
Q 011005 203 ATEDFDIR-YCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFKNEAQVLSQV-LHRNIVKLYGYCLH----KK 275 (496)
Q Consensus 203 ~~~~~~~~-~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~----~~ 275 (496)
.+++|.+. +.||-|-.|.|-.+.++ .++.+|+|++... ....+|++..-+. .|||||.+++.++. ..
T Consensus 59 itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds------~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rk 132 (400)
T KOG0604|consen 59 ITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS------PKARREVELHWMASGHPHIVSIIDVYENSYQGRK 132 (400)
T ss_pred chhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC------HHHHhHhhhhhhhcCCCceEEeehhhhhhccCce
Confidence 46677775 46999999999999654 6889999998654 3457888887666 49999999998865 45
Q ss_pred eEEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecC---CCCeEEccc
Q 011005 276 CMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNS---KLEAFVADF 352 (496)
Q Consensus 276 ~~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~---~~~~kl~Df 352 (496)
++.+|||.|+||.|++.++..++. .|++.++..|++||..|+.||| +.+|.||||||+|+|.+. +..+||+||
T Consensus 133 cLLiVmE~meGGeLfsriq~~g~~-afTErea~eI~~qI~~Av~~lH---~~nIAHRDlKpENLLyt~t~~na~lKLtDf 208 (400)
T KOG0604|consen 133 CLLIVMECMEGGELFSRIQDRGDQ-AFTEREASEIMKQIGLAVRYLH---SMNIAHRDLKPENLLYTTTSPNAPLKLTDF 208 (400)
T ss_pred eeEeeeecccchHHHHHHHHcccc-cchHHHHHHHHHHHHHHHHHHH---hcchhhccCChhheeeecCCCCcceEeccc
Confidence 788999999999999999987643 5899999999999999999999 789999999999999965 456999999
Q ss_pred cccccccCCCCCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCC
Q 011005 353 GTARLLHADSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRL 432 (496)
Q Consensus 353 g~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (496)
|+|+.-.. .....+.+.||.|.|||++...+|+..+|+||+||++|-|++|.+||-..... .....+...+.....
T Consensus 209 GFAK~t~~-~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~---aispgMk~rI~~gqy 284 (400)
T KOG0604|consen 209 GFAKETQE-PGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL---AISPGMKRRIRTGQY 284 (400)
T ss_pred ccccccCC-CccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCc---cCChhHHhHhhccCc
Confidence 99987643 34456678999999999999999999999999999999999999999754432 222223333333333
Q ss_pred CCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCCCCCcccc
Q 011005 433 PPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTPLVKHAAI 486 (496)
Q Consensus 433 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~~~~~~~~ 486 (496)
..+ ...+.+......++|..+|..+|++|.|+.|++.|+|+.....+...+..
T Consensus 285 ~FP-~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~hpwi~~~~~vp~tpl~ 337 (400)
T KOG0604|consen 285 EFP-EPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDHPWINQYEAVPQTPLS 337 (400)
T ss_pred cCC-ChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcCchhcccccCCCCCch
Confidence 332 33366666678899999999999999999999999999988776655443
No 258
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=3e-38 Score=302.03 Aligned_cols=258 Identities=24% Similarity=0.373 Sum_probs=206.9
Q ss_pred CCCCcceeeecCCeeEEEEEe-CCCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEec
Q 011005 206 DFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEYM 284 (496)
Q Consensus 206 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~~ 284 (496)
.|...+.||+|++|.||+|.. .+++.+++|.+..... ...+.+.+|+.+++.++|+|++++++++..++..++|+||+
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~ 98 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQ-QRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFL 98 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccch-hHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEecc
Confidence 455567899999999999975 4688999998865432 22356789999999999999999999999999999999999
Q ss_pred CCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCCC
Q 011005 285 ERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSN 364 (496)
Q Consensus 285 ~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 364 (496)
++++|.+++... .+++..+..++.|++.|++||| +.+++||||+|+||+++.++.++|+|||.+.........
T Consensus 99 ~~~~L~~~~~~~----~~~~~~~~~~~~ql~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~~ 171 (285)
T cd06648 99 EGGALTDIVTHT----RMNEEQIATVCLAVLKALSFLH---AQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVPR 171 (285)
T ss_pred CCCCHHHHHHhC----CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCChhhEEEcCCCcEEEcccccchhhccCCcc
Confidence 999999998762 5788999999999999999999 789999999999999999999999999998765443333
Q ss_pred ccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHHHHH
Q 011005 365 RTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVIRDI 444 (496)
Q Consensus 365 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (496)
.....|++.|+|||.+.+..++.++||||+|+++|+|++|+.||..... ........ ...+..... .....
T Consensus 172 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~-------~~~~~~~~-~~~~~~~~~-~~~~~ 242 (285)
T cd06648 172 RKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPP-------LQAMKRIR-DNLPPKLKN-LHKVS 242 (285)
T ss_pred cccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCH-------HHHHHHHH-hcCCCCCcc-cccCC
Confidence 3345688999999999998899999999999999999999999853211 11111111 111111110 11122
Q ss_pred HHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCCC
Q 011005 445 LLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTPL 480 (496)
Q Consensus 445 ~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~~ 480 (496)
..+.+++.+||+.+|++|||+.++++|.|+....+.
T Consensus 243 ~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~~~ 278 (285)
T cd06648 243 PRLRSFLDRMLVRDPAQRATAAELLNHPFLAKAGPP 278 (285)
T ss_pred HHHHHHHHHHcccChhhCcCHHHHccCcccccCCCc
Confidence 357899999999999999999999999999776543
No 259
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=1.5e-38 Score=304.03 Aligned_cols=265 Identities=22% Similarity=0.301 Sum_probs=202.0
Q ss_pred CCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEec
Q 011005 206 DFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEYM 284 (496)
Q Consensus 206 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~~ 284 (496)
+|++.+.||+|++|.||+|..+ +|+.||+|.+...........+.+|+.++++++|+||+++++++...+..++||||+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYM 80 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecC
Confidence 4788999999999999999875 688999999876543333456778999999999999999999999999999999999
Q ss_pred CCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCCC
Q 011005 285 ERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSN 364 (496)
Q Consensus 285 ~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 364 (496)
++ +|.+++........+++..+..++.|++.||.||| +.+++||||+|+||++++++.++++|||++.........
T Consensus 81 ~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~~ 156 (284)
T cd07836 81 DK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCH---ENRVLHRDLKPQNLLINKRGELKLADFGLARAFGIPVNT 156 (284)
T ss_pred Cc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCccc
Confidence 85 88888776544446899999999999999999999 779999999999999999999999999999766443333
Q ss_pred ccccccccccccccccccC-CcCcccchhhHHHHHHHHHhCCCCCccccccCC-------CCCCcchhHh------hhcC
Q 011005 365 RTLLAGTYGYIAPELAYTM-VMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSS-------SSDPKIMLID------VLDQ 430 (496)
Q Consensus 365 ~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~-------~~~~~~~~~~------~~~~ 430 (496)
.....+++.|+|||.+.+. .++.++||||+|+++|+|++|+.||........ ...+.....+ ....
T Consensus 157 ~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (284)
T cd07836 157 FSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYKP 236 (284)
T ss_pred cccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCchhcc
Confidence 3344578899999988654 568899999999999999999999863221000 0000000000 0000
Q ss_pred CCCCCCChh----HHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHH
Q 011005 431 RLPPPVDRK----VIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLI 474 (496)
Q Consensus 431 ~~~~~~~~~----~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~ 474 (496)
..+...... .......+.+++.+|++.||++||++.|+++++|+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~f 284 (284)
T cd07836 237 TFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQHPWF 284 (284)
T ss_pred cccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence 000000000 00112347799999999999999999999999875
No 260
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=1.4e-38 Score=305.97 Aligned_cols=253 Identities=24% Similarity=0.375 Sum_probs=202.5
Q ss_pred CcceeeecCCeeEEEEEeC-CCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEecCCC
Q 011005 209 IRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEYMERG 287 (496)
Q Consensus 209 ~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~~~~g 287 (496)
....||+|+||.||+|... +++.||+|.+..... ...+.+.+|+.+++.++|||++++++++..++..++|+||++++
T Consensus 25 ~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~-~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~ 103 (297)
T cd06659 25 NYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQ-QRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGG 103 (297)
T ss_pred hhhhcCCCCceeEEEEEEcCCCCEEEEEEEEeccc-chHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCC
Confidence 3456999999999999764 689999999865432 22356789999999999999999999999999999999999999
Q ss_pred ChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCCCccc
Q 011005 288 SLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTL 367 (496)
Q Consensus 288 ~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 367 (496)
+|..++... .+++..++.++.|++.||+||| +.+++||||+|+||+++.++.++|+|||++............
T Consensus 104 ~L~~~~~~~----~~~~~~~~~~~~qi~~~L~~LH---~~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~ 176 (297)
T cd06659 104 ALTDIVSQT----RLNEEQIATVCESVLQALCYLH---SQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKS 176 (297)
T ss_pred CHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHeEEccCCcEEEeechhHhhcccccccccc
Confidence 999877542 5789999999999999999999 789999999999999999999999999999765443333344
Q ss_pred cccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHHHHHHHH
Q 011005 368 LAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVIRDILLI 447 (496)
Q Consensus 368 ~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 447 (496)
..++..|+|||++.+..++.++||||+|+++|||++|+.||..... .... ..+........ .........+
T Consensus 177 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~-------~~~~-~~~~~~~~~~~-~~~~~~~~~l 247 (297)
T cd06659 177 LVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSP-------VQAM-KRLRDSPPPKL-KNAHKISPVL 247 (297)
T ss_pred eecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-------HHHH-HHHhccCCCCc-cccCCCCHHH
Confidence 6688999999999998999999999999999999999999863211 1111 11111111110 0011112346
Q ss_pred HHHHHhcccCCCCCCCCHHHHHHHHHHhccC
Q 011005 448 STVSFACLQSNPKSRPTMQSVSQEFLITRKT 478 (496)
Q Consensus 448 ~~li~~cl~~dP~~Rps~~evl~~~~~~~~~ 478 (496)
.+++.+||+.+|++||++.++++|+|+....
T Consensus 248 ~~~i~~~l~~~P~~Rps~~~ll~~~~~~~~~ 278 (297)
T cd06659 248 RDFLERMLTREPQERATAQELLDHPFLLQTG 278 (297)
T ss_pred HHHHHHHhcCCcccCcCHHHHhhChhhccCC
Confidence 7899999999999999999999999987653
No 261
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=1.8e-38 Score=303.49 Aligned_cols=261 Identities=24% Similarity=0.364 Sum_probs=200.3
Q ss_pred CCCCcceeeecCCeeEEEEEe-----CCCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecC--CeEE
Q 011005 206 DFDIRYCIGTGGYGSVYKAQL-----PNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHK--KCMF 278 (496)
Q Consensus 206 ~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~ 278 (496)
.|++.+.||+|+||.||+|.+ .++..||+|.++..........+.+|+.+++.++|||++++++++... ...+
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 84 (284)
T cd05079 5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIK 84 (284)
T ss_pred hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCceE
Confidence 468889999999999999963 357889999987655445557789999999999999999999998775 5689
Q ss_pred EEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccc
Q 011005 279 LIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLL 358 (496)
Q Consensus 279 lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 358 (496)
+||||+++++|.+++.... ..+++..+..++.|++.||+||| +.+++||||||+||+++.++.++|+|||+++..
T Consensus 85 lv~e~~~g~~L~~~l~~~~--~~~~~~~~~~i~~~i~~aL~~lH---~~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~ 159 (284)
T cd05079 85 LIMEFLPSGSLKEYLPRNK--NKINLKQQLKYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAI 159 (284)
T ss_pred EEEEccCCCCHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeeecccchheEEEcCCCCEEECCCcccccc
Confidence 9999999999999987543 25799999999999999999999 789999999999999999999999999999876
Q ss_pred cCCCCC---ccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccc-c---CCCCCCcc---hhHhhh
Q 011005 359 HADSSN---RTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSS-L---SSSSDPKI---MLIDVL 428 (496)
Q Consensus 359 ~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~-~---~~~~~~~~---~~~~~~ 428 (496)
...... .....++..|+|||.+.+..++.++||||||+++|+|++++.|...... . ........ ......
T Consensus 160 ~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (284)
T cd05079 160 ETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRVL 239 (284)
T ss_pred ccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHHHH
Confidence 433221 1234466789999999988899999999999999999998776421110 0 00000000 011111
Q ss_pred cCCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHH
Q 011005 429 DQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLI 474 (496)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~ 474 (496)
......+... .....+.+++.+||+.+|++|||+.++++.+..
T Consensus 240 ~~~~~~~~~~---~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~ 282 (284)
T cd05079 240 EEGKRLPRPP---NCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEA 282 (284)
T ss_pred HcCccCCCCC---CCCHHHHHHHHHHccCCcccCcCHHHHHHHHHh
Confidence 1111111111 122357899999999999999999999998753
No 262
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=5.3e-38 Score=297.67 Aligned_cols=254 Identities=28% Similarity=0.420 Sum_probs=201.2
Q ss_pred HhCCCCcceeeecCCeeEEEEEeCC-C---cEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEE
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLPN-G---KVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFL 279 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~~-~---~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 279 (496)
.++|+..+.||+|+||.||+|..+. + ..+|+|.+.........+.+..|++++++++|+|++++++++...+..++
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 83 (268)
T cd05063 4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMI 83 (268)
T ss_pred hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEE
Confidence 3568888999999999999997652 3 37999998765444445678899999999999999999999999999999
Q ss_pred EEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEcccccccccc
Q 011005 280 IYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLH 359 (496)
Q Consensus 280 V~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 359 (496)
||||+++++|.+++.... ..+++..+..++.|++.|++||| +.+++|+||||+||+++.++.++++|||++....
T Consensus 84 v~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~l~~al~~lH---~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~ 158 (268)
T cd05063 84 ITEYMENGALDKYLRDHD--GEFSSYQLVGMLRGIAAGMKYLS---DMNYVHRDLAARNILVNSNLECKVSDFGLSRVLE 158 (268)
T ss_pred EEEcCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccccchhhEEEcCCCcEEECCCccceecc
Confidence 999999999999987533 36899999999999999999999 7799999999999999999999999999997664
Q ss_pred CCCCCcc---ccccccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccCCCCCCcchhHhhhcCCCCCC
Q 011005 360 ADSSNRT---LLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSSDPKIMLIDVLDQRLPPP 435 (496)
Q Consensus 360 ~~~~~~~---~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (496)
....... ....++.|+|||++.+..++.++||||||+++||+++ |+.||.... .. .....+......+
T Consensus 159 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~-------~~-~~~~~i~~~~~~~ 230 (268)
T cd05063 159 DDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMS-------NH-EVMKAINDGFRLP 230 (268)
T ss_pred cccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCC-------HH-HHHHHHhcCCCCC
Confidence 3322111 1123457999999998889999999999999999997 999985321 11 1111111111111
Q ss_pred CChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHH
Q 011005 436 VDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFL 473 (496)
Q Consensus 436 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~ 473 (496)
... .....+.+++.+||+.+|++||++.++++.+.
T Consensus 231 ~~~---~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~ 265 (268)
T cd05063 231 APM---DCPSAVYQLMLQCWQQDRARRPRFVDIVNLLD 265 (268)
T ss_pred CCC---CCCHHHHHHHHHHcCCCcccCcCHHHHHHHHH
Confidence 111 12235789999999999999999999998874
No 263
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=3.3e-38 Score=302.08 Aligned_cols=261 Identities=29% Similarity=0.420 Sum_probs=212.2
Q ss_pred HHhCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEE
Q 011005 203 ATEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIY 281 (496)
Q Consensus 203 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~ 281 (496)
..+.|+..+.||+|++|.||+|.++ +++.|++|.+..... ....+.+|+++++.++|+|++++++++......++|+
T Consensus 17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 94 (286)
T cd06614 17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ--NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVM 94 (286)
T ss_pred ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch--hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEE
Confidence 4567888899999999999999776 688999999876543 3466789999999999999999999999999999999
Q ss_pred EecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCC
Q 011005 282 EYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHAD 361 (496)
Q Consensus 282 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 361 (496)
||+++++|.+++.... ..+++..+..++.|++.||.||| ..|++|+||+|+||+++.++.++|+|||++......
T Consensus 95 e~~~~~~L~~~l~~~~--~~l~~~~~~~i~~~i~~~L~~lH---~~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~ 169 (286)
T cd06614 95 EYMDGGSLTDIITQNF--VRMNEPQIAYVCREVLQGLEYLH---SQNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKE 169 (286)
T ss_pred eccCCCcHHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCChhhEEEcCCCCEEECccchhhhhccc
Confidence 9999999999998654 36899999999999999999999 789999999999999999999999999998766443
Q ss_pred CCCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHH
Q 011005 362 SSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVI 441 (496)
Q Consensus 362 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (496)
........+++.|+|||.+.+..++.++||||||+++|+|++|+.||..... ............+.... ..
T Consensus 170 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~-------~~~~~~~~~~~~~~~~~--~~ 240 (286)
T cd06614 170 KSKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPP-------LRALFLITTKGIPPLKN--PE 240 (286)
T ss_pred hhhhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCH-------HHHHHHHHhcCCCCCcc--hh
Confidence 3333344578899999999988899999999999999999999999863221 11111111111111111 11
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCC
Q 011005 442 RDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTP 479 (496)
Q Consensus 442 ~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~ 479 (496)
.....+.+++.+||+.+|.+|||+.+++++.|+.+.-.
T Consensus 241 ~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~~ 278 (286)
T cd06614 241 KWSPEFKDFLNKCLVKDPEKRPSAEELLQHPFLKKACP 278 (286)
T ss_pred hCCHHHHHHHHHHhccChhhCcCHHHHhhChHhhccCc
Confidence 12335789999999999999999999999999988433
No 264
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=3.4e-38 Score=298.49 Aligned_cols=253 Identities=23% Similarity=0.344 Sum_probs=199.1
Q ss_pred hCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccch----hHHHHHHHHHHHHHHHhhcccccccccceeecC--CeE
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSE----ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHK--KCM 277 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~ 277 (496)
.+|++.+.||+|+||.||+|..+ +++.||+|.+.... .....+.+.+|+.++++++|+||+++++++.+. ...
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence 46888999999999999999764 58999999875321 123446788999999999999999999988764 467
Q ss_pred EEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEcccccccc
Q 011005 278 FLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARL 357 (496)
Q Consensus 278 ~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 357 (496)
++||||+++++|.+++.... .+++..+..++.|++.||.||| +.+++|+||+|+||+++.++.++|+|||++..
T Consensus 82 ~~v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~l~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~ 155 (265)
T cd06652 82 SIFMEHMPGGSIKDQLKSYG---ALTENVTRKYTRQILEGVSYLH---SNMIVHRDIKGANILRDSVGNVKLGDFGASKR 155 (265)
T ss_pred EEEEEecCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEecCCCCEEECcCccccc
Confidence 89999999999999987543 5788888999999999999999 77999999999999999999999999999976
Q ss_pred ccCCC---CCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCC
Q 011005 358 LHADS---SNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPP 434 (496)
Q Consensus 358 ~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (496)
..... .......++..|+|||.+.+..++.++||||||+++|+|++|+.||.... ..............+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~-------~~~~~~~~~~~~~~~ 228 (265)
T cd06652 156 LQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFE-------AMAAIFKIATQPTNP 228 (265)
T ss_pred cccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccc-------hHHHHHHHhcCCCCC
Confidence 53211 11223457889999999988889999999999999999999999986321 111112211111111
Q ss_pred CCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHH
Q 011005 435 PVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLI 474 (496)
Q Consensus 435 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~ 474 (496)
.. +......+.+++.+|+. +|++||+++|+++|+|.
T Consensus 229 ~~---~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~~~~ 264 (265)
T cd06652 229 VL---PPHVSDHCRDFLKRIFV-EAKLRPSADELLRHTFV 264 (265)
T ss_pred CC---chhhCHHHHHHHHHHhc-ChhhCCCHHHHhcCccc
Confidence 11 11223346788889984 99999999999999886
No 265
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=4.5e-38 Score=300.07 Aligned_cols=253 Identities=25% Similarity=0.451 Sum_probs=199.3
Q ss_pred hCCCCcceeeecCCeeEEEEEeC------CCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEE
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLP------NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMF 278 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 278 (496)
.+|...+.||+|+||.||++... ++..+|+|.+..... .....+.+|+++++.++|+||+++++++..+...+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 83 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASE-SARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLL 83 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCH-HHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceE
Confidence 46778899999999999999632 356789998875442 33467899999999999999999999999999999
Q ss_pred EEEEecCCCChhhhhhCCCC------------CccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCC
Q 011005 279 LIYEYMERGSLFCNLHNNED------------AVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLE 346 (496)
Q Consensus 279 lV~e~~~~g~L~~~l~~~~~------------~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~ 346 (496)
+||||+++++|.+++..... ...+++..++.++.|++.|++||| +.+++||||||+||++++++.
T Consensus 84 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH---~~~i~H~dlkp~nil~~~~~~ 160 (280)
T cd05092 84 MVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLA---SLHFVHRDLATRNCLVGQGLV 160 (280)
T ss_pred EEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHH---HCCeecccccHhhEEEcCCCC
Confidence 99999999999999875432 125789999999999999999999 789999999999999999999
Q ss_pred eEEccccccccccCCCC--CccccccccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccCCCCCCcch
Q 011005 347 AFVADFGTARLLHADSS--NRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSSDPKIM 423 (496)
Q Consensus 347 ~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~~~~~~ 423 (496)
++|+|||++........ ......+++.|+|||.+.+..++.++||||||+++|||++ |+.||..... . .
T Consensus 161 ~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~-------~-~ 232 (280)
T cd05092 161 VKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSN-------T-E 232 (280)
T ss_pred EEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCH-------H-H
Confidence 99999999976533221 1122335678999999999999999999999999999998 8999853221 1 1
Q ss_pred hHhhhcCCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHH
Q 011005 424 LIDVLDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEF 472 (496)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~ 472 (496)
............... .....+.+++.+||+.||++||++.|+++.+
T Consensus 233 ~~~~~~~~~~~~~~~---~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l 278 (280)
T cd05092 233 AIECITQGRELERPR---TCPPEVYAIMQGCWQREPQQRMVIKDIHSRL 278 (280)
T ss_pred HHHHHHcCccCCCCC---CCCHHHHHHHHHHccCChhhCCCHHHHHHHH
Confidence 111111111111111 1123477999999999999999999999876
No 266
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=3.6e-38 Score=296.96 Aligned_cols=251 Identities=25% Similarity=0.388 Sum_probs=202.6
Q ss_pred CCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccch----hHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEE
Q 011005 206 DFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSE----ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLI 280 (496)
Q Consensus 206 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV 280 (496)
+|+..+.||+|++|.||+|..+ +++.|++|.+.... ..+..+.+.+|+.+++.++|+||+++++++..+...++|
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF 80 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence 4777889999999999999765 78999999886533 123456788999999999999999999999999999999
Q ss_pred EEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccC
Q 011005 281 YEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHA 360 (496)
Q Consensus 281 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 360 (496)
+||+++++|.+++.... .+++..+..++.|++.|++||| +.+++|+||+|+||+++.++.+||+|||++.....
T Consensus 81 ~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~ 154 (258)
T cd06632 81 LELVPGGSLAKLLKKYG---SFPEPVIRLYTRQILLGLEYLH---DRNTVHRDIKGANILVDTNGVVKLADFGMAKQVVE 154 (258)
T ss_pred EEecCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEccCccceeccc
Confidence 99999999999997653 5788999999999999999999 78999999999999999999999999999876543
Q ss_pred CCCCccccccccccccccccccCC-cCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhc-CCCCCCCCh
Q 011005 361 DSSNRTLLAGTYGYIAPELAYTMV-MTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLD-QRLPPPVDR 438 (496)
Q Consensus 361 ~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 438 (496)
.. ......+++.|+|||.+.... ++.++|+||+|+++|++++|+.||..... ......... ...+. ..
T Consensus 155 ~~-~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~-------~~~~~~~~~~~~~~~-~~- 224 (258)
T cd06632 155 FS-FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEG-------VAAVFKIGRSKELPP-IP- 224 (258)
T ss_pred cc-cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcH-------HHHHHHHHhcccCCC-cC-
Confidence 32 223456888999999987766 88999999999999999999999863221 111111111 11111 10
Q ss_pred hHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHH
Q 011005 439 KVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLI 474 (496)
Q Consensus 439 ~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~ 474 (496)
......+.+++.+||+.+|++||++.++++|+|+
T Consensus 225 --~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~~ 258 (258)
T cd06632 225 --DHLSDEAKDFILKCLQRDPSLRPTAAELLEHPFV 258 (258)
T ss_pred --CCcCHHHHHHHHHHhhcCcccCcCHHHHhcCCCC
Confidence 0112346789999999999999999999999873
No 267
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=1.1e-38 Score=305.70 Aligned_cols=262 Identities=24% Similarity=0.272 Sum_probs=200.0
Q ss_pred CCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchhHHHHHHHHHHHHHHHhhc-ccccccccceeecCCeEEEEEEe
Q 011005 206 DFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVL-HRNIVKLYGYCLHKKCMFLIYEY 283 (496)
Q Consensus 206 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lV~e~ 283 (496)
+|+..+.||+|+||.||++... +++.||+|.+...........+.+|+.++.++. |+||+++++++..+...+++|||
T Consensus 5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~ 84 (288)
T cd06616 5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMEL 84 (288)
T ss_pred HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEec
Confidence 4556678999999999999654 689999999876543344567889999999996 99999999999998899999999
Q ss_pred cCCCChhhhh---hCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccC
Q 011005 284 MERGSLFCNL---HNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHA 360 (496)
Q Consensus 284 ~~~g~L~~~l---~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 360 (496)
+.. ++.++. ... ....+++..+..++.|++.||+|||+ ..+++||||||+||+++.++.++|+|||++.....
T Consensus 85 ~~~-~l~~l~~~~~~~-~~~~l~~~~~~~i~~~i~~~l~~lh~--~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~ 160 (288)
T cd06616 85 MDI-SLDKFYKYVYEV-LKSVIPEEILGKIAVATVKALNYLKE--ELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVD 160 (288)
T ss_pred ccC-CHHHHHHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHhh--cCCeeccCCCHHHEEEccCCcEEEeecchhHHhcc
Confidence 864 554432 221 12368999999999999999999994 35899999999999999999999999999976543
Q ss_pred CCCCccccccccccccccccccC---CcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCC
Q 011005 361 DSSNRTLLAGTYGYIAPELAYTM---VMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVD 437 (496)
Q Consensus 361 ~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (496)
.. ......+++.|+|||.+.+. .++.++||||+|+++|+|++|+.||.... .......+......+....
T Consensus 161 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~------~~~~~~~~~~~~~~~~~~~ 233 (288)
T cd06616 161 SI-AKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWN------SVFDQLTQVVKGDPPILSN 233 (288)
T ss_pred CC-ccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcc------hHHHHHhhhcCCCCCcCCC
Confidence 32 22234578899999998876 68899999999999999999999986322 0111111111111111111
Q ss_pred hhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccC
Q 011005 438 RKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKT 478 (496)
Q Consensus 438 ~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~ 478 (496)
.........+.+|+.+||+.||++|||++++++|+|+....
T Consensus 234 ~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~~~~~~~~ 274 (288)
T cd06616 234 SEEREFSPSFVNFINLCLIKDESKRPKYKELLEHPFIKDYE 274 (288)
T ss_pred cCCCccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhchh
Confidence 11112233578999999999999999999999999997643
No 268
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=4.4e-38 Score=296.04 Aligned_cols=253 Identities=23% Similarity=0.388 Sum_probs=203.2
Q ss_pred CCCCcceeeecCCeeEEEEEe-CCCcEEEEEEcccch-hHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEe
Q 011005 206 DFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSE-ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEY 283 (496)
Q Consensus 206 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~ 283 (496)
+|+..+.||+|+||.||+|.. .+++.+|+|.+.... .......+.+|++++++++|||++++++.+..++..++||||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEY 80 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEec
Confidence 478889999999999999965 468889999986542 233456788999999999999999999999999999999999
Q ss_pred cCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCC-CCeEEccccccccccCCC
Q 011005 284 MERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSK-LEAFVADFGTARLLHADS 362 (496)
Q Consensus 284 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~-~~~kl~Dfg~~~~~~~~~ 362 (496)
+++++|.+++.... ...+++..+..++.|++.|+.||| +++++|+||+|+||+++.+ +.++++|||.+.......
T Consensus 81 ~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh---~~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~ 156 (256)
T cd08220 81 APGGTLAEYIQKRC-NSLLDEDTILHFFVQILLALHHVH---TKLILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKS 156 (256)
T ss_pred CCCCCHHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEEccCCCceecCCCc
Confidence 99999999997643 235789999999999999999999 7899999999999999865 457999999998764332
Q ss_pred CCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHHH
Q 011005 363 SNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVIR 442 (496)
Q Consensus 363 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (496)
......++..|+|||.+.+..++.++||||+|+++|+|++|+.||+... ................. . .
T Consensus 157 -~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~-~---~ 224 (256)
T cd08220 157 -KAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAAN-------LPALVLKIMSGTFAPIS-D---R 224 (256)
T ss_pred -cccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCc-------hHHHHHHHHhcCCCCCC-C---C
Confidence 2233567889999999998889999999999999999999999986321 11122222222111111 1 1
Q ss_pred HHHHHHHHHHhcccCCCCCCCCHHHHHHHHHH
Q 011005 443 DILLISTVSFACLQSNPKSRPTMQSVSQEFLI 474 (496)
Q Consensus 443 ~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~ 474 (496)
....+.+++.+||+.+|++|||+.|+++|+|+
T Consensus 225 ~~~~l~~li~~~l~~~p~~Rpt~~~ll~~p~~ 256 (256)
T cd08220 225 YSPDLRQLILSMLNLDPSKRPQLSQIMAQPIC 256 (256)
T ss_pred cCHHHHHHHHHHccCChhhCCCHHHHhhCCCC
Confidence 12247789999999999999999999999763
No 269
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=7.5e-38 Score=294.74 Aligned_cols=246 Identities=28% Similarity=0.402 Sum_probs=194.1
Q ss_pred ceeeecCCeeEEEEEeCC----CcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEecCC
Q 011005 211 YCIGTGGYGSVYKAQLPN----GKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEYMER 286 (496)
Q Consensus 211 ~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~~~~ 286 (496)
+.||+|+||.||+|.+.. +..+|+|.+.........+.+.+|+.+++.+.|+||+++++++. .+..++||||+++
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~ 79 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAPL 79 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCCC
Confidence 469999999999996532 36899999987654344567899999999999999999999876 4567999999999
Q ss_pred CChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCCCcc
Q 011005 287 GSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRT 366 (496)
Q Consensus 287 g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 366 (496)
|+|.+++.... .+++..+..++.|++.||+||| ..+++|+||||+||+++.++.++|+|||+++..........
T Consensus 80 ~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lh---~~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~ 153 (257)
T cd05060 80 GPLLKYLKKRR---EIPVSDLKELAHQVAMGMAYLE---SKHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYR 153 (257)
T ss_pred CcHHHHHHhCC---CCCHHHHHHHHHHHHHHHHHHh---hcCeeccCcccceEEEcCCCcEEeccccccceeecCCcccc
Confidence 99999998654 6899999999999999999999 77999999999999999999999999999987643332211
Q ss_pred ---ccccccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHHH
Q 011005 367 ---LLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVIR 442 (496)
Q Consensus 367 ---~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (496)
...++..|+|||.+.+..++.++||||||+++|++++ |..||..... ......+......+... .
T Consensus 154 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~--------~~~~~~~~~~~~~~~~~---~ 222 (257)
T cd05060 154 ATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKG--------AEVIAMLESGERLPRPE---E 222 (257)
T ss_pred cccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCH--------HHHHHHHHcCCcCCCCC---C
Confidence 1123457999999999999999999999999999998 9999864321 11111111111111111 1
Q ss_pred HHHHHHHHHHhcccCCCCCCCCHHHHHHHHHH
Q 011005 443 DILLISTVSFACLQSNPKSRPTMQSVSQEFLI 474 (496)
Q Consensus 443 ~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~ 474 (496)
....+.+++.+||+.+|++||++.++++.+..
T Consensus 223 ~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~ 254 (257)
T cd05060 223 CPQEIYSIMLSCWKYRPEDRPTFSELESTFRR 254 (257)
T ss_pred CCHHHHHHHHHHhcCChhhCcCHHHHHHHHHh
Confidence 12357799999999999999999999988754
No 270
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=2.4e-38 Score=300.67 Aligned_cols=256 Identities=25% Similarity=0.421 Sum_probs=200.1
Q ss_pred CCCCcceeeecCCeeEEEEEe-CCCcEEEEEEcccchh---------HHHHHHHHHHHHHHHhhcccccccccceeecCC
Q 011005 206 DFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSEE---------LAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKK 275 (496)
Q Consensus 206 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---------~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~ 275 (496)
+|.+.+.||+|+||.||+|.. .+++.||+|.+..... ....+.+.+|+.+++.++|+|++++++++...+
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 81 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE 81 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence 467788999999999999965 4688999998864211 112346788999999999999999999999999
Q ss_pred eEEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEcccccc
Q 011005 276 CMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTA 355 (496)
Q Consensus 276 ~~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~ 355 (496)
..++||||+++++|.+++.... .+++..+..++.|++.||.||| +.+++||||+|+||+++.++.++++|||++
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~~~nil~~~~~~~~l~d~~~~ 155 (272)
T cd06629 82 YLSIFLEYVPGGSIGSCLRTYG---RFEEQLVRFFTEQVLEGLAYLH---SKGILHRDLKADNLLVDADGICKISDFGIS 155 (272)
T ss_pred ceEEEEecCCCCcHHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHh---hCCeeecCCChhhEEEcCCCeEEEeecccc
Confidence 9999999999999999987653 6888999999999999999999 779999999999999999999999999999
Q ss_pred ccccCCCC--CccccccccccccccccccCC--cCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCC
Q 011005 356 RLLHADSS--NRTLLAGTYGYIAPELAYTMV--MTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQR 431 (496)
Q Consensus 356 ~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~--~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 431 (496)
........ ......++..|+|||.+.... ++.++|+||+|+++|++++|..||..... .....+.....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~-------~~~~~~~~~~~ 228 (272)
T cd06629 156 KKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEA-------IAAMFKLGNKR 228 (272)
T ss_pred ccccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcch-------HHHHHHhhccc
Confidence 76543211 122345788999999987654 78899999999999999999999853211 11111111111
Q ss_pred CCCCC-ChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHH
Q 011005 432 LPPPV-DRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLI 474 (496)
Q Consensus 432 ~~~~~-~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~ 474 (496)
..... ..........+.+++.+||..||++|||++++++|+|+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~ 272 (272)
T cd06629 229 SAPPIPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQHPFI 272 (272)
T ss_pred cCCcCCccccccCCHHHHHHHHHHhcCChhhCCCHHHHhhCCCC
Confidence 11111 11111123457789999999999999999999999874
No 271
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=1.2e-38 Score=300.33 Aligned_cols=252 Identities=26% Similarity=0.364 Sum_probs=205.7
Q ss_pred CCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccch--hHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEE
Q 011005 206 DFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYE 282 (496)
Q Consensus 206 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e 282 (496)
+|++.+.||+|+||.||+|..+ +++.||+|.+.... .....+.+.+|++++++++||||+++++++..+...++|+|
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD 80 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence 4788999999999999999775 68999999987543 22345778999999999999999999999999999999999
Q ss_pred ecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCC
Q 011005 283 YMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADS 362 (496)
Q Consensus 283 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 362 (496)
|+.+++|.+.+... ..++...+..++.|++.||.||| ..+++|+||+|+||++++++.++|+|||.+.......
T Consensus 81 ~~~~~~L~~~l~~~---~~l~~~~~~~~~~~i~~~l~~lh---~~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~ 154 (258)
T cd05578 81 LLLGGDLRYHLSQK---VKFSEEQVKFWICEIVLALEYLH---SKGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT 154 (258)
T ss_pred CCCCCCHHHHHHhc---CCcCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeEEcCCCCEEEeecccccccCCCc
Confidence 99999999998765 26888999999999999999999 7799999999999999999999999999997764432
Q ss_pred CCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhc-CCCCCCCChhHH
Q 011005 363 SNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLD-QRLPPPVDRKVI 441 (496)
Q Consensus 363 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 441 (496)
......++..|+|||.+.+..++.++|+||+|+++|+|++|..||...... .......... .....+ .
T Consensus 155 -~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~~-----~ 223 (258)
T cd05578 155 -LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRT-----IRDQIRAKQETADVLYP-----A 223 (258)
T ss_pred -cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCcc-----HHHHHHHHhccccccCc-----c
Confidence 223456788999999999888999999999999999999999998743210 1111111111 111111 1
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCH--HHHHHHHHH
Q 011005 442 RDILLISTVSFACLQSNPKSRPTM--QSVSQEFLI 474 (496)
Q Consensus 442 ~~~~~l~~li~~cl~~dP~~Rps~--~evl~~~~~ 474 (496)
.....+.+++.+||+.||.+||++ +|+++|+|+
T Consensus 224 ~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~~~~~~ 258 (258)
T cd05578 224 TWSTEAIDAINKLLERDPQKRLGDNLKDLKNHPYF 258 (258)
T ss_pred cCcHHHHHHHHHHccCChhHcCCccHHHHhcCCCC
Confidence 122457799999999999999999 999988774
No 272
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=5.9e-38 Score=298.53 Aligned_cols=256 Identities=23% Similarity=0.369 Sum_probs=203.2
Q ss_pred hCCCCcceeeecCCeeEEEEEeC------CCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEE
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLP------NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMF 278 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 278 (496)
++|++...||+|+||.||+|..+ +.+.|++|.+.........+.+.+|++++++++|+||+++++++.+....+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 84 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHY 84 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcce
Confidence 57889999999999999999754 346799998876554445677899999999999999999999999989999
Q ss_pred EEEEecCCCChhhhhhCCCCCc------cCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccc
Q 011005 279 LIYEYMERGSLFCNLHNNEDAV------ELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADF 352 (496)
Q Consensus 279 lV~e~~~~g~L~~~l~~~~~~~------~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Df 352 (496)
+||||+++|+|.+++....... .+++..+..++.|++.||.||| +.+++||||||+||+++.++.++++||
T Consensus 85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH---~~~i~H~dlkp~Nili~~~~~~~l~~~ 161 (275)
T cd05046 85 MILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLS---NARFVHRDLAARNCLVSSQREVKVSLL 161 (275)
T ss_pred EEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhh---hcCcccCcCccceEEEeCCCcEEEccc
Confidence 9999999999999997654222 5899999999999999999999 779999999999999999999999999
Q ss_pred cccccccCCCC-CccccccccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccCCCCCCcchhHhhhcC
Q 011005 353 GTARLLHADSS-NRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSSDPKIMLIDVLDQ 430 (496)
Q Consensus 353 g~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 430 (496)
|++........ ......++..|+|||.+.+..++.++||||||+++|++++ |..||..... ..........
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~-------~~~~~~~~~~ 234 (275)
T cd05046 162 SLSKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSD-------EEVLNRLQAG 234 (275)
T ss_pred ccccccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccch-------HHHHHHHHcC
Confidence 99875432211 1223346778999999988888999999999999999998 7888853211 1111122112
Q ss_pred CCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHH
Q 011005 431 RLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFL 473 (496)
Q Consensus 431 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~ 473 (496)
........ .....+.+++.+||+.+|++|||+.|+++.+.
T Consensus 235 ~~~~~~~~---~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 235 KLELPVPE---GCPSRLYKLMTRCWAVNPKDRPSFSELVSALG 274 (275)
T ss_pred CcCCCCCC---CCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence 21111111 11235778999999999999999999998864
No 273
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=4.2e-38 Score=296.39 Aligned_cols=247 Identities=26% Similarity=0.401 Sum_probs=196.8
Q ss_pred ceeeecCCeeEEEEEeCC--C--cEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEecCC
Q 011005 211 YCIGTGGYGSVYKAQLPN--G--KVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEYMER 286 (496)
Q Consensus 211 ~~lg~G~~g~Vy~~~~~~--~--~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~~~~ 286 (496)
+.||+|++|.||+|.+.+ + ..||+|.+.........+.+.+|+.++++++|+||+++++.+.. ...++||||+++
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~ 79 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPL 79 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCC
Confidence 358999999999997643 3 36899999876543556788999999999999999999999988 889999999999
Q ss_pred CChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCCC--
Q 011005 287 GSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSN-- 364 (496)
Q Consensus 287 g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~-- 364 (496)
++|.+.+..... ..+++..++.++.|++.||+||| +.+++|+||+|+||+++.++.+||+|||++.........
T Consensus 80 ~~L~~~l~~~~~-~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~ 155 (257)
T cd05040 80 GSLLDRLRKDAL-GHFLISTLCDYAVQIANGMRYLE---SKRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYV 155 (257)
T ss_pred CcHHHHHHhccc-ccCcHHHHHHHHHHHHHHHHHHH---hCCccccccCcccEEEecCCEEEecccccccccccccccee
Confidence 999999987543 46899999999999999999999 789999999999999999999999999999876543221
Q ss_pred -ccccccccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHHH
Q 011005 365 -RTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVIR 442 (496)
Q Consensus 365 -~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (496)
.....++..|+|||++.+..++.++||||||+++|+|++ |+.||..... ................ ...
T Consensus 156 ~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~-------~~~~~~~~~~~~~~~~---~~~ 225 (257)
T cd05040 156 MEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSG-------SQILKKIDKEGERLER---PEA 225 (257)
T ss_pred cccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCH-------HHHHHHHHhcCCcCCC---Ccc
Confidence 112346778999999999999999999999999999998 9999853221 1111111111100000 011
Q ss_pred HHHHHHHHHHhcccCCCCCCCCHHHHHHHH
Q 011005 443 DILLISTVSFACLQSNPKSRPTMQSVSQEF 472 (496)
Q Consensus 443 ~~~~l~~li~~cl~~dP~~Rps~~evl~~~ 472 (496)
.+..+.+++.+||+.+|++|||+.++++.+
T Consensus 226 ~~~~~~~li~~~l~~~p~~Rps~~~~~~~l 255 (257)
T cd05040 226 CPQDIYNVMLQCWAHNPADRPTFAALREFL 255 (257)
T ss_pred CCHHHHHHHHHHCCCCcccCCCHHHHHHHh
Confidence 223577899999999999999999999875
No 274
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=5.4e-38 Score=295.48 Aligned_cols=250 Identities=25% Similarity=0.423 Sum_probs=199.2
Q ss_pred hCCCCcceeeecCCeeEEEEEeCCCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEec
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEYM 284 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~~ 284 (496)
.+|++.+.||+|+||.||+|.+.+++.+|+|.+...... ...+.+|++++++++|||++++++++......++||||+
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 81 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAMS--EEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFM 81 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCCCC--HHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcC
Confidence 468888999999999999998877889999998754321 246789999999999999999999999999999999999
Q ss_pred CCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCCC
Q 011005 285 ERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSN 364 (496)
Q Consensus 285 ~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 364 (496)
++++|.+++.... ..+++..+..++.|++.|++||| +.+++|+||+|+||+++.++.++|+|||.+.........
T Consensus 82 ~~~~L~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lH---~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~ 156 (256)
T cd05112 82 EHGCLSDYLRAQR--GKFSQETLLGMCLDVCEGMAYLE---SSNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYT 156 (256)
T ss_pred CCCcHHHHHHhCc--cCCCHHHHHHHHHHHHHHHHHHH---HCCccccccccceEEEcCCCeEEECCCcceeecccCccc
Confidence 9999999987543 25788999999999999999999 779999999999999999999999999998765332211
Q ss_pred -ccccccccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHHH
Q 011005 365 -RTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVIR 442 (496)
Q Consensus 365 -~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (496)
.....++..|+|||.+.+..++.++||||+|+++|||++ |+.||.... .. ...+.+.......... .
T Consensus 157 ~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~-------~~-~~~~~~~~~~~~~~~~---~ 225 (256)
T cd05112 157 SSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRS-------NS-EVVETINAGFRLYKPR---L 225 (256)
T ss_pred ccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCC-------HH-HHHHHHhCCCCCCCCC---C
Confidence 112234568999999998899999999999999999998 999985321 11 1111111111100000 0
Q ss_pred HHHHHHHHHHhcccCCCCCCCCHHHHHHHH
Q 011005 443 DILLISTVSFACLQSNPKSRPTMQSVSQEF 472 (496)
Q Consensus 443 ~~~~l~~li~~cl~~dP~~Rps~~evl~~~ 472 (496)
....+.+++.+||+.+|++|||+.|+++++
T Consensus 226 ~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l 255 (256)
T cd05112 226 ASQSVYELMQHCWKERPEDRPSFSLLLHQL 255 (256)
T ss_pred CCHHHHHHHHHHcccChhhCCCHHHHHHhh
Confidence 123578899999999999999999999875
No 275
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=3.7e-38 Score=299.06 Aligned_cols=247 Identities=26% Similarity=0.395 Sum_probs=191.7
Q ss_pred eeeecCCeeEEEEEeCC-Cc--EEEEEEcccchhHHHHHHHHHHHHHHHhh-cccccccccceeecCCeEEEEEEecCCC
Q 011005 212 CIGTGGYGSVYKAQLPN-GK--VFALKKLHTSEELAFIKSFKNEAQVLSQV-LHRNIVKLYGYCLHKKCMFLIYEYMERG 287 (496)
Q Consensus 212 ~lg~G~~g~Vy~~~~~~-~~--~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lV~e~~~~g 287 (496)
.||+|+||.||+|..++ +. .+++|.++..........+.+|+++++++ +||||+++++++......++||||+++|
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 81 (270)
T cd05047 2 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHG 81 (270)
T ss_pred cCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCCC
Confidence 58999999999997753 33 46888887544334456788999999999 7999999999999999999999999999
Q ss_pred ChhhhhhCCC-------------CCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccc
Q 011005 288 SLFCNLHNNE-------------DAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGT 354 (496)
Q Consensus 288 ~L~~~l~~~~-------------~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~ 354 (496)
+|.+++.... ....+++..+..++.|++.|++||| +.+++||||||+||++++++.++++|||+
T Consensus 82 ~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH---~~~i~H~dikp~nili~~~~~~kl~dfgl 158 (270)
T cd05047 82 NLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGL 158 (270)
T ss_pred cHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccccceEEEcCCCeEEECCCCC
Confidence 9999987542 1224789999999999999999999 78999999999999999999999999999
Q ss_pred cccccCCCCCccccccccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccCCCCCCcchhHhhhcCCCC
Q 011005 355 ARLLHADSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSSDPKIMLIDVLDQRLP 433 (496)
Q Consensus 355 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (496)
+...... ........+..|+|||++....++.++||||||+++|||++ |..||..... .. ....+.....
T Consensus 159 ~~~~~~~-~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~-------~~-~~~~~~~~~~ 229 (270)
T cd05047 159 SRGQEVY-VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC-------AE-LYEKLPQGYR 229 (270)
T ss_pred ccccchh-hhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCH-------HH-HHHHHhCCCC
Confidence 8533211 11112234567999999988899999999999999999997 9999853211 11 1111111111
Q ss_pred CCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHH
Q 011005 434 PPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFL 473 (496)
Q Consensus 434 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~ 473 (496)
..... .....+.+++.+||+.+|.+|||+.++++.+.
T Consensus 230 ~~~~~---~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~ 266 (270)
T cd05047 230 LEKPL---NCDDEVYDLMRQCWREKPYERPSFAQILVSLN 266 (270)
T ss_pred CCCCC---cCCHHHHHHHHHHcccChhhCCCHHHHHHHHH
Confidence 11111 11224679999999999999999999999874
No 276
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=4.2e-38 Score=304.08 Aligned_cols=257 Identities=24% Similarity=0.310 Sum_probs=203.3
Q ss_pred hCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchh--HHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEE
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEE--LAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIY 281 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~ 281 (496)
++|++.+.||+|+||.||++..+ .++.|++|.+..... ......+.+|+++++.++||||+++++.+..++..++||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVM 80 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence 36888999999999999999765 578999998876432 233457789999999999999999999999999999999
Q ss_pred EecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCC
Q 011005 282 EYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHAD 361 (496)
Q Consensus 282 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 361 (496)
||++|++|.+++.... .+++..+..++.|++.|+.||| +.+++||||||+||+++.++.++++|||+++.....
T Consensus 81 e~~~g~~L~~~l~~~~---~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~ 154 (305)
T cd05609 81 EYVEGGDCATLLKNIG---ALPVDMARMYFAETVLALEYLH---NYGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMS 154 (305)
T ss_pred ecCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCchHHEEECCCCCEEEeeCCCccccCcC
Confidence 9999999999997643 5788999999999999999999 779999999999999999999999999998642110
Q ss_pred CC---------------CccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHh
Q 011005 362 SS---------------NRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLID 426 (496)
Q Consensus 362 ~~---------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~ 426 (496)
.. ......++..|+|||.+.+..++.++||||||+++||+++|..||... ........
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~-------~~~~~~~~ 227 (305)
T cd05609 155 LTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGD-------TPEELFGQ 227 (305)
T ss_pred ccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCC-------CHHHHHHH
Confidence 00 011235678899999999889999999999999999999999998521 11222222
Q ss_pred hhcCCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCC---HHHHHHHHHHhc
Q 011005 427 VLDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPT---MQSVSQEFLITR 476 (496)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps---~~evl~~~~~~~ 476 (496)
........+.... .....+.+++.+||+.||++||+ +.++++|+|+..
T Consensus 228 ~~~~~~~~~~~~~--~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~~~~~~ 278 (305)
T cd05609 228 VISDDIEWPEGDE--ALPADAQDLISRLLRQNPLERLGTGGAFEVKQHRFFLG 278 (305)
T ss_pred HHhcccCCCCccc--cCCHHHHHHHHHHhccChhhccCccCHHHHHhCccccC
Confidence 2222211111110 12234679999999999999998 799999998744
No 277
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=2e-38 Score=303.43 Aligned_cols=263 Identities=24% Similarity=0.287 Sum_probs=201.9
Q ss_pred CCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchh-HHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEe
Q 011005 206 DFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEE-LAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEY 283 (496)
Q Consensus 206 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~ 283 (496)
+|++.+.||+|+||.||+|.+. +|+.||+|++..... ......+.+|+.++++++||||+++++++..+...++|+||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~ 80 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEY 80 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEecc
Confidence 4788899999999999999764 689999999876442 23346788999999999999999999999999999999999
Q ss_pred cCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCC
Q 011005 284 MERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSS 363 (496)
Q Consensus 284 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 363 (496)
+ +++|.+++.... ..+++..++.++.||+.||+||| +.+++|+||+|+||+++.++.++|+|||++........
T Consensus 81 ~-~~~L~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~ 154 (286)
T cd07832 81 M-PSDLSEVLRDEE--RPLPEAQVKSYMRMLLKGVAYMH---ANGIMHRDLKPANLLISADGVLKIADFGLARLFSEEEP 154 (286)
T ss_pred c-CCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCC
Confidence 9 999999987543 36899999999999999999999 78999999999999999999999999999987654321
Q ss_pred -CccccccccccccccccccC-CcCcccchhhHHHHHHHHHhCCCCCccccccCC-------CCCCcc-hhH-----hhh
Q 011005 364 -NRTLLAGTYGYIAPELAYTM-VMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSS-------SSDPKI-MLI-----DVL 428 (496)
Q Consensus 364 -~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~-------~~~~~~-~~~-----~~~ 428 (496)
......++..|+|||.+.+. .++.++||||+|+++|+|++|.+||........ ...+.. ... ...
T Consensus 155 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (286)
T cd07832 155 RLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDY 234 (286)
T ss_pred CccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcchh
Confidence 12335688899999988654 468899999999999999999888753221000 000000 000 000
Q ss_pred cC-CCCCCCC----hhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHH
Q 011005 429 DQ-RLPPPVD----RKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLI 474 (496)
Q Consensus 429 ~~-~~~~~~~----~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~ 474 (496)
.. ..+.... .........+.+++.+||+.||++|||++++++|+|+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h~~~ 285 (286)
T cd07832 235 NKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRHPYF 285 (286)
T ss_pred hcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhCcCc
Confidence 00 0000000 0000112467899999999999999999999999986
No 278
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=1e-37 Score=294.34 Aligned_cols=252 Identities=25% Similarity=0.436 Sum_probs=201.0
Q ss_pred HhCCCCcceeeecCCeeEEEEEeCCCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEe
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEY 283 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~ 283 (496)
.++|.+.+.||+|+||.||+|...++..+|+|.+..... ....+.+|++++++++|+||+++++.+.. ...+++|||
T Consensus 5 ~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e~ 81 (260)
T cd05073 5 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSM--SVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEF 81 (260)
T ss_pred ccceeEEeEecCccceEEEEEEecCCccEEEEecCCChh--HHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEEe
Confidence 467899999999999999999887888899998876432 23568899999999999999999999887 678999999
Q ss_pred cCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCC
Q 011005 284 MERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSS 363 (496)
Q Consensus 284 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 363 (496)
+++++|.+++.... ...+++..+..++.|++.||.||| +.+++|+||+|+||+++.++.++|+|||.+........
T Consensus 82 ~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~aL~~lH---~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~ 157 (260)
T cd05073 82 MAKGSLLDFLKSDE-GSKQPLPKLIDFSAQIAEGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEY 157 (260)
T ss_pred CCCCcHHHHHHhCC-ccccCHHHHHHHHHHHHHHHHHHH---hCCccccccCcceEEEcCCCcEEECCCcceeeccCCCc
Confidence 99999999997643 236788999999999999999999 77999999999999999999999999999976543221
Q ss_pred C-ccccccccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHH
Q 011005 364 N-RTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVI 441 (496)
Q Consensus 364 ~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (496)
. .....++..|+|||++.+..++.++|+||||+++|++++ |+.||..... . .....+......+...
T Consensus 158 ~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~-------~-~~~~~~~~~~~~~~~~--- 226 (260)
T cd05073 158 TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSN-------P-EVIRALERGYRMPRPE--- 226 (260)
T ss_pred ccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCH-------H-HHHHHHhCCCCCCCcc---
Confidence 1 122335567999999998889999999999999999998 9999863211 1 1111111211111111
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCHHHHHHHHH
Q 011005 442 RDILLISTVSFACLQSNPKSRPTMQSVSQEFL 473 (496)
Q Consensus 442 ~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~ 473 (496)
.....+.+++.+|++.+|++||++.++++.+.
T Consensus 227 ~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~ 258 (260)
T cd05073 227 NCPEELYNIMMRCWKNRPEERPTFEYIQSVLD 258 (260)
T ss_pred cCCHHHHHHHHHHcccCcccCcCHHHHHHHHh
Confidence 12235779999999999999999999988763
No 279
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=6.6e-38 Score=297.19 Aligned_cols=251 Identities=30% Similarity=0.499 Sum_probs=199.4
Q ss_pred hCCCCcceeeecCCeeEEEEEeCC-C---cEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEE
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLPN-G---KVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLI 280 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~~-~---~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV 280 (496)
++|.+.+.||+|+||.||+|..+. + ..||+|.+...........+..|+.+++.++||||+++++++..+...++|
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv 83 (269)
T cd05065 4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMII 83 (269)
T ss_pred HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEE
Confidence 457888999999999999997643 3 369999987654444557899999999999999999999999999999999
Q ss_pred EEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccC
Q 011005 281 YEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHA 360 (496)
Q Consensus 281 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 360 (496)
|||+++++|.+++.... ..+++..++.++.|++.||+||| +.+++|+||||+||+++.++.++|+|||++.....
T Consensus 84 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~~l~~al~~lH---~~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~ 158 (269)
T cd05065 84 TEFMENGALDSFLRQND--GQFTVIQLVGMLRGIAAGMKYLS---EMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLED 158 (269)
T ss_pred EecCCCCcHHHHHhhCC--CCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccChheEEEcCCCcEEECCCcccccccc
Confidence 99999999999987543 26899999999999999999999 78999999999999999999999999999876543
Q ss_pred CCCCcc---ccc--cccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccCCCCCCcchhHhhhcC--CC
Q 011005 361 DSSNRT---LLA--GTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSSDPKIMLIDVLDQ--RL 432 (496)
Q Consensus 361 ~~~~~~---~~~--gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~--~~ 432 (496)
...... ... .+..|+|||.+.+..++.++||||+|+++||+++ |..||..... . .....+.. ..
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~-------~-~~~~~i~~~~~~ 230 (269)
T cd05065 159 DTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN-------Q-DVINAIEQDYRL 230 (269)
T ss_pred CccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCH-------H-HHHHHHHcCCcC
Confidence 222111 111 2357999999999999999999999999999886 9999863221 1 11111111 11
Q ss_pred CCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHH
Q 011005 433 PPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFL 473 (496)
Q Consensus 433 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~ 473 (496)
+.+. ..+..+.+++.+||+.+|++||++.++++.+.
T Consensus 231 ~~~~-----~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 266 (269)
T cd05065 231 PPPM-----DCPTALHQLMLDCWQKDRNARPKFGQIVSTLD 266 (269)
T ss_pred CCcc-----cCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 1111 11234678999999999999999999998753
No 280
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=4.6e-38 Score=297.07 Aligned_cols=249 Identities=26% Similarity=0.381 Sum_probs=201.9
Q ss_pred eeecCCeeEEEEEeC-CCcEEEEEEcccch--hHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEecCCCCh
Q 011005 213 IGTGGYGSVYKAQLP-NGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEYMERGSL 289 (496)
Q Consensus 213 lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~~~~g~L 289 (496)
||.|++|.||+|... +++.||+|.+.... .....+.+.+|+.+++.++||||+++++.+.++...++|+||+++++|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 689999999999775 48899999987543 223456789999999999999999999999999999999999999999
Q ss_pred hhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCCCccccc
Q 011005 290 FCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLA 369 (496)
Q Consensus 290 ~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 369 (496)
.+++.+.. .++...+..++.|++.||.||| +.+++|+||+|+||+++.++.++|+|||++....... ......
T Consensus 81 ~~~l~~~~---~l~~~~~~~~~~~i~~~l~~lH---~~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~-~~~~~~ 153 (262)
T cd05572 81 WTILRDRG---LFDEYTARFYIACVVLAFEYLH---NRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ-KTWTFC 153 (262)
T ss_pred HHHHhhcC---CCCHHHHHHHHHHHHHHHHHHh---hCCcccCCCCHHHEEEcCCCCEEEeeCCcccccCccc-cccccc
Confidence 99997653 5788999999999999999999 7899999999999999999999999999998765432 223346
Q ss_pred cccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHHHHHHHHHH
Q 011005 370 GTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVIRDILLIST 449 (496)
Q Consensus 370 gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 449 (496)
+++.|+|||.+.+..++.++|+||+|+++|+|++|..||..... ...................... ...+.+
T Consensus 154 ~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 225 (262)
T cd05572 154 GTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDE-----DPMEIYNDILKGNGKLEFPNYI---DKAAKD 225 (262)
T ss_pred CCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCC-----CHHHHHHHHhccCCCCCCCccc---CHHHHH
Confidence 78899999999888899999999999999999999999863321 1111222222111111111111 335789
Q ss_pred HHHhcccCCCCCCCC-----HHHHHHHHHHhc
Q 011005 450 VSFACLQSNPKSRPT-----MQSVSQEFLITR 476 (496)
Q Consensus 450 li~~cl~~dP~~Rps-----~~evl~~~~~~~ 476 (496)
++.+||+.+|++||+ ++|+++|+|+..
T Consensus 226 ~i~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~ 257 (262)
T cd05572 226 LIKQLLRRNPEERLGNLKGGIKDIKKHKWFNG 257 (262)
T ss_pred HHHHHccCChhhCcCCcccCHHHHhcChhhhC
Confidence 999999999999999 999999999864
No 281
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=4.2e-38 Score=298.50 Aligned_cols=248 Identities=25% Similarity=0.344 Sum_probs=186.5
Q ss_pred eeeecCCeeEEEEEeCC---CcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEecCCCC
Q 011005 212 CIGTGGYGSVYKAQLPN---GKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEYMERGS 288 (496)
Q Consensus 212 ~lg~G~~g~Vy~~~~~~---~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~~~~g~ 288 (496)
.||+|+||.||+|...+ ...+++|.+...........+.+|+.+++.++|+||+++++.+......++||||+++|+
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g~ 81 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLGD 81 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCCc
Confidence 58999999999996543 457888887655444445678899999999999999999999999999999999999999
Q ss_pred hhhhhhCCCC--CccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCC--C
Q 011005 289 LFCNLHNNED--AVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSS--N 364 (496)
Q Consensus 289 L~~~l~~~~~--~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~--~ 364 (496)
|.+++..... ....++.....++.||+.||+||| +.+|+||||||+||++++++.+||+|||++........ .
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~ 158 (269)
T cd05042 82 LKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLH---QADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYIT 158 (269)
T ss_pred HHHHHHhccccccccccHHHHHHHHHHHHHHHHHHH---hcCEecccccHhheEecCCCcEEEeccccccccccchheec
Confidence 9999876532 123567788899999999999999 78999999999999999999999999999865432221 1
Q ss_pred cccccccccccccccccc-------CCcCcccchhhHHHHHHHHHh-CCCCCccccccCCCCCCcchhHhhhcC---CCC
Q 011005 365 RTLLAGTYGYIAPELAYT-------MVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSSDPKIMLIDVLDQ---RLP 433 (496)
Q Consensus 365 ~~~~~gt~~y~aPE~~~~-------~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~---~~~ 433 (496)
.....+++.|+|||++.. ..++.++||||+|+++|||++ |..||..... .......... .++
T Consensus 159 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~-------~~~~~~~~~~~~~~~~ 231 (269)
T cd05042 159 KDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSD-------EQVLKQVVREQDIKLP 231 (269)
T ss_pred cCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCH-------HHHHHHHhhccCccCC
Confidence 122345678999998743 456789999999999999999 7888753221 1111111111 111
Q ss_pred CCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHH
Q 011005 434 PPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEF 472 (496)
Q Consensus 434 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~ 472 (496)
.+. ........+.+++..|+ .||++|||++||++.+
T Consensus 232 ~~~--~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l 267 (269)
T cd05042 232 KPQ--LDLKYSDRWYEVMQFCW-LDPETRPTAEEVHELL 267 (269)
T ss_pred CCc--ccccCCHHHHHHHHHHh-cCcccccCHHHHHHHh
Confidence 111 01112233556777888 5999999999998865
No 282
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=5.1e-38 Score=300.41 Aligned_cols=261 Identities=26% Similarity=0.395 Sum_probs=197.3
Q ss_pred hCCCCcceeeecCCeeEEEEEe-----CCCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeec--CCeE
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQL-----PNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLH--KKCM 277 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~--~~~~ 277 (496)
.+|++.+.||+|+||.||+|.. .+++.||+|.+..... ...+.+.+|++++++++||||+++++++.. ....
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 82 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTA-EHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 82 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCH-HHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCce
Confidence 4688899999999999999964 3578999999876543 334678899999999999999999998754 3468
Q ss_pred EEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEcccccccc
Q 011005 278 FLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARL 357 (496)
Q Consensus 278 ~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 357 (496)
++||||+++|+|.+++.... ..+++..+..++.|++.||+||| ..+++||||||+||++++++.++|+|||++..
T Consensus 83 ~lv~e~~~~~~L~~~l~~~~--~~l~~~~~~~~~~~l~~aL~~LH---~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~ 157 (284)
T cd05081 83 RLVMEYLPYGSLRDYLQKHR--ERLDHRKLLLYASQICKGMEYLG---SKRYVHRDLATRNILVESENRVKIGDFGLTKV 157 (284)
T ss_pred EEEEEecCCCCHHHHHHhcC--cCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCCHhhEEECCCCeEEECCCccccc
Confidence 99999999999999997543 25789999999999999999999 78999999999999999999999999999987
Q ss_pred ccCCCCCc---cccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCcccccc-----CCCCC---CcchhHh
Q 011005 358 LHADSSNR---TLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSL-----SSSSD---PKIMLID 426 (496)
Q Consensus 358 ~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~-----~~~~~---~~~~~~~ 426 (496)
........ ....++..|+|||++.+..++.++||||||+++|||++|..|+...... ..... ......+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (284)
T cd05081 158 LPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIE 237 (284)
T ss_pred ccCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHHHH
Confidence 64332211 1112344699999999989999999999999999999987765321110 00000 0000111
Q ss_pred hhcCCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHH
Q 011005 427 VLDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLI 474 (496)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~ 474 (496)
.+......+... .....+.+++.+||+.+|++|||+.|+++.+..
T Consensus 238 ~~~~~~~~~~~~---~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~ 282 (284)
T cd05081 238 LLKNNGRLPAPP---GCPAEIYAIMKECWNNDPSQRPSFSELALQVEA 282 (284)
T ss_pred HHhcCCcCCCCC---CCCHHHHHHHHHHccCChhhCCCHHHHHHHHHh
Confidence 111111111111 112347899999999999999999999998753
No 283
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=9.9e-38 Score=293.73 Aligned_cols=247 Identities=23% Similarity=0.392 Sum_probs=196.6
Q ss_pred hCCCCcceeeecCCeeEEEEEeCCCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceee-cCCeEEEEEEe
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCL-HKKCMFLIYEY 283 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~-~~~~~~lV~e~ 283 (496)
.+|++.+.||+|+||.||+|..+ |..||+|.+..... .+.+.+|+.++++++|+|++++++++. .+...++||||
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~~~---~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~ 81 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDAT---AQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 81 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEEc-CCcEEEEEeCCCch---HHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEEC
Confidence 47888999999999999999874 77899998865432 356889999999999999999999764 45678999999
Q ss_pred cCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCC
Q 011005 284 MERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSS 363 (496)
Q Consensus 284 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 363 (496)
+++++|.+++..... ..+++..++.++.|++.||+||| ..+++||||||+||++++++.+||+|||++.......
T Consensus 82 ~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~- 156 (256)
T cd05082 82 MAKGSLVDYLRSRGR-SVLGGDCLLKFSLDVCEAMEYLE---ANNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ- 156 (256)
T ss_pred CCCCcHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHH---hCCEeccccchheEEEcCCCcEEecCCccceeccccC-
Confidence 999999999876432 25789999999999999999999 7899999999999999999999999999987653322
Q ss_pred CccccccccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHHH
Q 011005 364 NRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVIR 442 (496)
Q Consensus 364 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (496)
....++..|+|||++.+..++.++||||||+++|+|++ |+.||..... . .....+.......... .
T Consensus 157 --~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~-------~-~~~~~~~~~~~~~~~~---~ 223 (256)
T cd05082 157 --DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL-------K-DVVPRVEKGYKMDAPD---G 223 (256)
T ss_pred --CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCH-------H-HHHHHHhcCCCCCCCC---C
Confidence 22334568999999999899999999999999999997 9999853211 1 1111111111111111 1
Q ss_pred HHHHHHHHHHhcccCCCCCCCCHHHHHHHHH
Q 011005 443 DILLISTVSFACLQSNPKSRPTMQSVSQEFL 473 (496)
Q Consensus 443 ~~~~l~~li~~cl~~dP~~Rps~~evl~~~~ 473 (496)
....+.+++.+||+.+|++|||+.++++.+.
T Consensus 224 ~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~ 254 (256)
T cd05082 224 CPPVVYDVMKQCWHLDAATRPSFLQLREQLE 254 (256)
T ss_pred CCHHHHHHHHHHhcCChhhCcCHHHHHHHHh
Confidence 2235778999999999999999999998764
No 284
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=4.1e-38 Score=296.46 Aligned_cols=254 Identities=23% Similarity=0.380 Sum_probs=203.9
Q ss_pred CCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccch-hHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEe
Q 011005 206 DFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSE-ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEY 283 (496)
Q Consensus 206 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~ 283 (496)
+|.+.+.||+|+||.||+|..+ +|..+|+|.+.... .....+.+.+|+.+++.++|+||+++++.+......++|+||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 80 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEY 80 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEec
Confidence 4778899999999999999765 58889999986542 122345678999999999999999999999999999999999
Q ss_pred cCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCC-eEEccccccccccCCC
Q 011005 284 MERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLE-AFVADFGTARLLHADS 362 (496)
Q Consensus 284 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~-~kl~Dfg~~~~~~~~~ 362 (496)
+++++|.+++..... ..+++..+..++.|++.||.||| ..+++|+||+|+||++++++. ++++|||.+.......
T Consensus 81 ~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh---~~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~ 156 (257)
T cd08225 81 CDGGDLMKRINRQRG-VLFSEDQILSWFVQISLGLKHIH---DRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSM 156 (257)
T ss_pred CCCCcHHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCCHHHEEEcCCCCeEEecccccchhccCCc
Confidence 999999999876432 25789999999999999999999 779999999999999998854 6999999998765433
Q ss_pred CCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHHH
Q 011005 363 SNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVIR 442 (496)
Q Consensus 363 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (496)
.......|++.|+|||.+.+..++.++|+||+|+++|++++|+.||.... .................. .
T Consensus 157 ~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~-------~~~~~~~~~~~~~~~~~~----~ 225 (257)
T cd08225 157 ELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNN-------LHQLVLKICQGYFAPISP----N 225 (257)
T ss_pred ccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCcc-------HHHHHHHHhcccCCCCCC----C
Confidence 33334568889999999988889999999999999999999999986321 111222222222221111 1
Q ss_pred HHHHHHHHHHhcccCCCCCCCCHHHHHHHHHH
Q 011005 443 DILLISTVSFACLQSNPKSRPTMQSVSQEFLI 474 (496)
Q Consensus 443 ~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~ 474 (496)
....+.+++.+||..+|++|||+.|+++|+|+
T Consensus 226 ~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~~~~ 257 (257)
T cd08225 226 FSRDLRSLISQLFKVSPRDRPSITSILKRPFL 257 (257)
T ss_pred CCHHHHHHHHHHhccChhhCcCHHHHhhCCCC
Confidence 12247789999999999999999999999874
No 285
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=3.3e-38 Score=302.31 Aligned_cols=264 Identities=29% Similarity=0.356 Sum_probs=202.2
Q ss_pred hCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccch-hHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEE
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSE-ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYE 282 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e 282 (496)
++|++.+.||+|+||.||+|..+ +++.||+|.++... .....+.+.+|++++++++|+||+++++++..++..++|||
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e 80 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFE 80 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEe
Confidence 36888999999999999999765 58899999887543 22334678899999999999999999999999999999999
Q ss_pred ecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCC
Q 011005 283 YMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADS 362 (496)
Q Consensus 283 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 362 (496)
|++++.+..+..... .+++..+..++.||+.|+.||| ..+++|+||+|+||++++++.++|+|||++.......
T Consensus 81 ~~~~~~l~~~~~~~~---~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~ 154 (288)
T cd07833 81 YVERTLLELLEASPG---GLPPDAVRSYIWQLLQAIAYCH---SHNIIHRDIKPENILVSESGVLKLCDFGFARALRARP 154 (288)
T ss_pred cCCCCHHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCCEEEEeeecccccCCCc
Confidence 999877765554332 5789999999999999999999 7799999999999999999999999999998765443
Q ss_pred C-CccccccccccccccccccC-CcCcccchhhHHHHHHHHHhCCCCCccccccCC---------CCCC----cchhHhh
Q 011005 363 S-NRTLLAGTYGYIAPELAYTM-VMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSS---------SSDP----KIMLIDV 427 (496)
Q Consensus 363 ~-~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~---------~~~~----~~~~~~~ 427 (496)
. ......++..|+|||++.+. .++.++||||+|+++|+|++|+.||........ ...+ .......
T Consensus 155 ~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (288)
T cd07833 155 ASPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPR 234 (288)
T ss_pred cccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCcc
Confidence 2 23345678899999999888 889999999999999999999999863221000 0000 0000000
Q ss_pred hcC-CCCCCCChhHH------HHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHH
Q 011005 428 LDQ-RLPPPVDRKVI------RDILLISTVSFACLQSNPKSRPTMQSVSQEFLI 474 (496)
Q Consensus 428 ~~~-~~~~~~~~~~~------~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~ 474 (496)
... ..+........ .....+.+++.+||..+|++|||+++++++.|+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~f 288 (288)
T cd07833 235 FAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQHPYF 288 (288)
T ss_pred ccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcCCCC
Confidence 000 00000000000 013457899999999999999999999999874
No 286
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=5.1e-39 Score=306.36 Aligned_cols=255 Identities=24% Similarity=0.374 Sum_probs=202.3
Q ss_pred hCCCCcceeeecCCeeEEEEEeCCCcEEEEEEcccc-hhHHHHHHHHHHHHHHHhhc-ccccccccceeecCCeEEEEEE
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTS-EELAFIKSFKNEAQVLSQVL-HRNIVKLYGYCLHKKCMFLIYE 282 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~-~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lV~e 282 (496)
..|++.+.||.||.+.||++...+.+.||+|++... .+.+....|.+|+..+.+++ |.+|+++++|-..++.+|||||
T Consensus 361 ~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvmE 440 (677)
T KOG0596|consen 361 REYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVME 440 (677)
T ss_pred chhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEee
Confidence 458899999999999999999888888999887653 35556788999999999996 9999999999999999999999
Q ss_pred ecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCC
Q 011005 283 YMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADS 362 (496)
Q Consensus 283 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 362 (496)
+-+ .+|..+|.+... ..+...++.+..||+.|+.+.| ..||||.||||.|+|+-. |.+||+|||.|..+..+.
T Consensus 441 ~Gd-~DL~kiL~k~~~--~~~~~~lk~ywkqML~aV~~IH---~~gIVHSDLKPANFLlVk-G~LKLIDFGIA~aI~~DT 513 (677)
T KOG0596|consen 441 CGD-IDLNKILKKKKS--IDPDWFLKFYWKQMLLAVKTIH---QHGIVHSDLKPANFLLVK-GRLKLIDFGIANAIQPDT 513 (677)
T ss_pred ccc-ccHHHHHHhccC--CCchHHHHHHHHHHHHHHHHHH---HhceeecCCCcccEEEEe-eeEEeeeechhcccCccc
Confidence 764 589999987543 2232367788999999999999 779999999999999976 589999999999887654
Q ss_pred CC--ccccccccccccccccccCC-----------cCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhc
Q 011005 363 SN--RTLLAGTYGYIAPELAYTMV-----------MTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLD 429 (496)
Q Consensus 363 ~~--~~~~~gt~~y~aPE~~~~~~-----------~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 429 (496)
.. ....+||+.||+||.+.... .+.++||||+|||||+|+.|+.||+..... ......+.+
T Consensus 514 TsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~------~aKl~aI~~ 587 (677)
T KOG0596|consen 514 TSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIINQ------IAKLHAITD 587 (677)
T ss_pred cceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHHH------HHHHHhhcC
Confidence 43 34578999999999886543 456899999999999999999999744311 111222222
Q ss_pred C--CCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhc
Q 011005 430 Q--RLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITR 476 (496)
Q Consensus 430 ~--~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~ 476 (496)
+ .+..+.-. ... .+.+++..||.+||.+|||..|+|+|+|...
T Consensus 588 P~~~Iefp~~~--~~~--~li~~mK~CL~rdPkkR~si~eLLqhpFl~~ 632 (677)
T KOG0596|consen 588 PNHEIEFPDIP--END--ELIDVMKCCLARDPKKRWSIPELLQHPFLQI 632 (677)
T ss_pred CCccccccCCC--Cch--HHHHHHHHHHhcCcccCCCcHHHhcCccccc
Confidence 2 11111111 111 2778999999999999999999999999876
No 287
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=6.9e-39 Score=308.71 Aligned_cols=253 Identities=28% Similarity=0.410 Sum_probs=206.1
Q ss_pred hCCCCcceeeecCCeeEEEEEeCC---Cc--EEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEE
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLPN---GK--VFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFL 279 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~~---~~--~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 279 (496)
+..+..++||.|-||.||+|.+.+ |+ .||||..+.+...+..+.|..|+.+|+.++||||++++|.|.+.. .|+
T Consensus 389 e~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e~P-~Wi 467 (974)
T KOG4257|consen 389 ELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVEQP-MWI 467 (974)
T ss_pred hhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeeccc-eeE
Confidence 445556789999999999996532 33 589999988776667889999999999999999999999998764 789
Q ss_pred EEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEcccccccccc
Q 011005 280 IYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLH 359 (496)
Q Consensus 280 V~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 359 (496)
|||.++-|.|..+++.+.. .++......++.||..||+||| +..+|||||..+|||+.....|||+|||+++.+.
T Consensus 468 vmEL~~~GELr~yLq~nk~--sL~l~tL~ly~~Qi~talaYLe---SkrfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~e 542 (974)
T KOG4257|consen 468 VMELAPLGELREYLQQNKD--SLPLRTLTLYCYQICTALAYLE---SKRFVHRDIAARNILVSSPQCVKLADFGLSRYLE 542 (974)
T ss_pred EEecccchhHHHHHHhccc--cchHHHHHHHHHHHHHHHHHHH---hhchhhhhhhhhheeecCcceeeecccchhhhcc
Confidence 9999999999999997654 6888999999999999999999 7899999999999999999999999999999987
Q ss_pred CCCCCccc-cccccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccCCCCCCcchhHhhhcCCCCCCCC
Q 011005 360 ADSSNRTL-LAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVD 437 (496)
Q Consensus 360 ~~~~~~~~-~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (496)
++...... ..-+..|||||.+.-.+++.+||||-||+.+||++. |..||+.... .+....-....++|.+..
T Consensus 543 d~~yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkN------sDVI~~iEnGeRlP~P~n 616 (974)
T KOG4257|consen 543 DDAYYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKN------SDVIGHIENGERLPCPPN 616 (974)
T ss_pred ccchhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccc------cceEEEecCCCCCCCCCC
Confidence 66543322 334568999999999999999999999999999876 9999974432 111111112345554443
Q ss_pred hhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHH
Q 011005 438 RKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLI 474 (496)
Q Consensus 438 ~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~ 474 (496)
.+..+..|+.+||..||.+||++.|+...+-.
T Consensus 617 -----CPp~LYslmskcWayeP~kRPrftei~~~lsd 648 (974)
T KOG4257|consen 617 -----CPPALYSLMSKCWAYEPSKRPRFTEIKAILSD 648 (974)
T ss_pred -----CChHHHHHHHHHhccCcccCCcHHHHHHHHHH
Confidence 34457789999999999999999988665443
No 288
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=3e-38 Score=309.31 Aligned_cols=268 Identities=23% Similarity=0.315 Sum_probs=201.8
Q ss_pred HhCCCCcceeeecCCeeEEEEEe-CCCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecC-----CeE
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHK-----KCM 277 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~-----~~~ 277 (496)
.++|++.+.||+|+||.||+|.. .+|+.||+|.+...........+.+|+.++++++|+||+++++++... ...
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 83 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDV 83 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceE
Confidence 46899999999999999999965 468999999987543334456678899999999999999999987654 357
Q ss_pred EEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEcccccccc
Q 011005 278 FLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARL 357 (496)
Q Consensus 278 ~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 357 (496)
++|+||+.+ ++...+... .+++..+..++.|++.||+||| +.+++||||||+||+++.++.++|+|||++..
T Consensus 84 ~lv~e~~~~-~l~~~~~~~----~l~~~~~~~i~~ql~~aL~~LH---~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~ 155 (336)
T cd07849 84 YIVQELMET-DLYKLIKTQ----HLSNDHIQYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTNCDLKICDFGLARI 155 (336)
T ss_pred EEEehhccc-CHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHEEECCCCCEEECcccceee
Confidence 999999964 787777543 6899999999999999999999 78999999999999999999999999999976
Q ss_pred ccCCCCC---cccccccccccccccccc-CCcCcccchhhHHHHHHHHHhCCCCCccccccC---------CCCCCcchh
Q 011005 358 LHADSSN---RTLLAGTYGYIAPELAYT-MVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLS---------SSSDPKIML 424 (496)
Q Consensus 358 ~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~---------~~~~~~~~~ 424 (496)
....... .....+++.|+|||.+.+ ..++.++||||+|+++|+|++|+.||....... .... ....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~-~~~~ 234 (336)
T cd07849 156 ADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPS-QEDL 234 (336)
T ss_pred ccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCC-HHHH
Confidence 5432211 123467889999998754 568899999999999999999999985321100 0000 0000
Q ss_pred Hhhhc-------CCCCCCCC----hhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCCC
Q 011005 425 IDVLD-------QRLPPPVD----RKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTPL 480 (496)
Q Consensus 425 ~~~~~-------~~~~~~~~----~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~~ 480 (496)
..... ...+.... .........+.+++.+||+.||++|||+.|+++|+|+......
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~~~~ 301 (336)
T cd07849 235 NCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQYHDP 301 (336)
T ss_pred HHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCccccccCCC
Confidence 00000 00000000 0001123357899999999999999999999999999776544
No 289
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=4.5e-38 Score=299.60 Aligned_cols=251 Identities=25% Similarity=0.297 Sum_probs=198.0
Q ss_pred eeecCCeeEEEEEeC-CCcEEEEEEcccch--hHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEecCCCCh
Q 011005 213 IGTGGYGSVYKAQLP-NGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEYMERGSL 289 (496)
Q Consensus 213 lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~~~~g~L 289 (496)
||+|+||+||+|..+ +|+.||+|.+.... .......+.+|++++++++||||+++++++...+..++||||+++++|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 689999999999654 68899999986532 122344567899999999999999999999999999999999999999
Q ss_pred hhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCCCccccc
Q 011005 290 FCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLA 369 (496)
Q Consensus 290 ~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 369 (496)
.+++..... ..+++..+..++.|++.||.||| ..+++||||+|+||++++++.++|+|||.+...... .......
T Consensus 81 ~~~l~~~~~-~~~~~~~~~~~~~ql~~~l~~lH---~~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~-~~~~~~~ 155 (277)
T cd05577 81 KYHIYNVGE-PGFPEARAIFYAAQIICGLEHLH---QRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGG-KKIKGRA 155 (277)
T ss_pred HHHHHHcCc-CCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEECCCCCEEEccCcchhhhccC-Ccccccc
Confidence 999876543 35899999999999999999999 789999999999999999999999999999766432 2223345
Q ss_pred cccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHHHHHHHHHH
Q 011005 370 GTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVIRDILLIST 449 (496)
Q Consensus 370 gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 449 (496)
++..|+|||.+.+..++.++||||+|+++|+|++|+.||...... . ............ +..... .....+.+
T Consensus 156 ~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~---~-~~~~~~~~~~~~-~~~~~~---~~~~~~~~ 227 (277)
T cd05577 156 GTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEK---V-EKEELKRRTLEM-AVEYPD---KFSPEAKD 227 (277)
T ss_pred CCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCccc---c-cHHHHHhccccc-cccCCc---cCCHHHHH
Confidence 778999999998888999999999999999999999998643210 0 001111111110 111100 11234678
Q ss_pred HHHhcccCCCCCCC-----CHHHHHHHHHHhc
Q 011005 450 VSFACLQSNPKSRP-----TMQSVSQEFLITR 476 (496)
Q Consensus 450 li~~cl~~dP~~Rp-----s~~evl~~~~~~~ 476 (496)
++.+||+.||++|| ++.++++|+|+.+
T Consensus 228 li~~~l~~~p~~R~~~~~~~~~~ll~h~~~~~ 259 (277)
T cd05577 228 LCEALLQKDPEKRLGCRGGSADEVREHPLFKD 259 (277)
T ss_pred HHHHHccCChhHccCCCcccHHHHHhChhhhc
Confidence 99999999999999 8888999999954
No 290
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=6.4e-38 Score=303.44 Aligned_cols=272 Identities=28% Similarity=0.333 Sum_probs=202.5
Q ss_pred HhCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchh-HHHHHHHHHHHHHHHhhcccccccccceeecC--CeEEE
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEE-LAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHK--KCMFL 279 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~l 279 (496)
.++|++.+.||+|+||.||+|..+ +|+.||+|.++.... ......+.+|+.++++++|+||+++++++... +..++
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFL 85 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEE
Confidence 467999999999999999999764 689999999865432 11223456899999999999999999998754 46899
Q ss_pred EEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEcccccccccc
Q 011005 280 IYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLH 359 (496)
Q Consensus 280 V~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 359 (496)
||||+++ +|.+++.... ..+++..+..++.|++.||+||| ..+++||||||+||+++.++.++|+|||++....
T Consensus 86 v~e~~~~-~l~~~l~~~~--~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~ 159 (309)
T cd07845 86 VMEYCEQ-DLASLLDNMP--TPFSESQVKCLMLQLLRGLQYLH---ENFIIHRDLKVSNLLLTDKGCLKIADFGLARTYG 159 (309)
T ss_pred EEecCCC-CHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEECccceeeecC
Confidence 9999975 7888877543 36899999999999999999999 7899999999999999999999999999998765
Q ss_pred CCCCCcccccccccccccccccc-CCcCcccchhhHHHHHHHHHhCCCCCccccccCC---------CCCCcc--hhHh-
Q 011005 360 ADSSNRTLLAGTYGYIAPELAYT-MVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSS---------SSDPKI--MLID- 426 (496)
Q Consensus 360 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~---------~~~~~~--~~~~- 426 (496)
..........+++.|+|||.+.+ ..++.++||||+|+++|+|++|+.||........ ...... ....
T Consensus 160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (309)
T cd07845 160 LPAKPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDL 239 (309)
T ss_pred CccCCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhhcc
Confidence 43333333446788999999875 4578999999999999999999999863321100 000000 0000
Q ss_pred -hhc-CCCCC-CCC---hhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCCCC
Q 011005 427 -VLD-QRLPP-PVD---RKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTPLV 481 (496)
Q Consensus 427 -~~~-~~~~~-~~~---~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~~~ 481 (496)
... ..... +.. .........+.+++.+||+.||++|||+.|+++|+|+....-..
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h~~f~~~~~~~ 300 (309)
T cd07845 240 PLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALESSYFKEKPLPC 300 (309)
T ss_pred cccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcChhhccCCCCC
Confidence 000 00000 000 00001123467899999999999999999999999998655443
No 291
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=1.8e-37 Score=295.79 Aligned_cols=258 Identities=26% Similarity=0.429 Sum_probs=203.4
Q ss_pred hCCCCcceeeecCCeeEEEEEeCC-Cc----EEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEE
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLPN-GK----VFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFL 279 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~~-~~----~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 279 (496)
.+|++.+.||+|+||.||+|..++ |+ .+|+|.............+.+|+.++++++|+||+++++++.. ...++
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~ 85 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQL 85 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceEE
Confidence 568889999999999999997542 32 5899988766544555778899999999999999999999987 67899
Q ss_pred EEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEcccccccccc
Q 011005 280 IYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLH 359 (496)
Q Consensus 280 V~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 359 (496)
||||+++|+|.+++..... .+++..+..++.|++.||+||| +.+++||||||+||+++.++.++|+|||.++...
T Consensus 86 v~e~~~~g~L~~~l~~~~~--~~~~~~~~~~~~qi~~~l~~LH---~~~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~ 160 (279)
T cd05057 86 ITQLMPLGCLLDYVRNHKD--NIGSQYLLNWCVQIAKGMSYLE---EKRLVHRDLAARNVLVKTPQHVKITDFGLAKLLD 160 (279)
T ss_pred EEecCCCCcHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHH---hCCEEecccCcceEEEcCCCeEEECCCccccccc
Confidence 9999999999999876433 5899999999999999999999 7899999999999999999999999999998765
Q ss_pred CCCCCcc--ccccccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccCCCCCCcchhHhhhcCCCCCCC
Q 011005 360 ADSSNRT--LLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPV 436 (496)
Q Consensus 360 ~~~~~~~--~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (496)
....... ...++..|+|||.+....++.++|+||||+++||+++ |+.||.... .. .....+......+.
T Consensus 161 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~-------~~-~~~~~~~~~~~~~~ 232 (279)
T cd05057 161 VDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIP-------AV-EIPDLLEKGERLPQ 232 (279)
T ss_pred CcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCC-------HH-HHHHHHhCCCCCCC
Confidence 3322111 1223567999999988889999999999999999998 999986321 11 11122222111111
Q ss_pred ChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCC
Q 011005 437 DRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTP 479 (496)
Q Consensus 437 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~ 479 (496)
.. .....+.+++.+||..||.+||++.++++.+....+.+
T Consensus 233 ~~---~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~~~ 272 (279)
T cd05057 233 PP---ICTIDVYMVLVKCWMIDAESRPTFKELINEFSKMARDP 272 (279)
T ss_pred CC---CCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhCC
Confidence 11 01124678899999999999999999999988765543
No 292
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=3.5e-38 Score=302.96 Aligned_cols=264 Identities=23% Similarity=0.289 Sum_probs=199.6
Q ss_pred hCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchh-HHHHHHHHHHHHHHHhhcccccccccceeecC--CeEEEE
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEE-LAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHK--KCMFLI 280 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~lV 280 (496)
++|++.+.||+|+||.||+|..+ +++.+|+|.++.... ......+.+|+.++++++||||+++++++... ...++|
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv 84 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMV 84 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEE
Confidence 57888999999999999999775 588999999875432 22234567899999999999999999998877 789999
Q ss_pred EEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccC
Q 011005 281 YEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHA 360 (496)
Q Consensus 281 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 360 (496)
|||+++ +|.+.+..... .+++..++.++.|++.||+||| +.+++|+||+|+||+++.++.++|+|||++.....
T Consensus 85 ~e~~~~-~L~~~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH---~~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~ 158 (293)
T cd07843 85 MEYVEH-DLKSLMETMKQ--PFLQSEVKCLMLQLLSGVAHLH---DNWILHRDLKTSNLLLNNRGILKICDFGLAREYGS 158 (293)
T ss_pred ehhcCc-CHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCCHHHEEECCCCcEEEeecCceeeccC
Confidence 999974 89888876432 6899999999999999999999 77999999999999999999999999999987655
Q ss_pred CCCCccccccccccccccccccC-CcCcccchhhHHHHHHHHHhCCCCCccccccCC---------CCCCcch--hHhh-
Q 011005 361 DSSNRTLLAGTYGYIAPELAYTM-VMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSS---------SSDPKIM--LIDV- 427 (496)
Q Consensus 361 ~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~---------~~~~~~~--~~~~- 427 (496)
.........+++.|+|||.+.+. .++.++||||+|+++|+|++|+.||........ ....... ....
T Consensus 159 ~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (293)
T cd07843 159 PLKPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELP 238 (293)
T ss_pred CccccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhccc
Confidence 43333345578899999988764 468899999999999999999999863321100 0000000 0000
Q ss_pred -hc-CC---C-CCCCChhHHH--HHHHHHHHHHhcccCCCCCCCCHHHHHHHHHH
Q 011005 428 -LD-QR---L-PPPVDRKVIR--DILLISTVSFACLQSNPKSRPTMQSVSQEFLI 474 (496)
Q Consensus 428 -~~-~~---~-~~~~~~~~~~--~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~ 474 (496)
.. .. . .......... ....+.+++.+||+.||++|||+.|+++|.|+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~~~f 293 (293)
T cd07843 239 GAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKHPYF 293 (293)
T ss_pred hhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhcCCCC
Confidence 00 00 0 0000000000 12346789999999999999999999999875
No 293
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=3.5e-39 Score=313.07 Aligned_cols=253 Identities=23% Similarity=0.382 Sum_probs=203.9
Q ss_pred cceeeecCCeeEEEEEeC-CCcEEEEEEcc---cchhHHHHHHHHHHHHHHHhhcccccccccceeecCC--eEEEEEEe
Q 011005 210 RYCIGTGGYGSVYKAQLP-NGKVFALKKLH---TSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKK--CMFLIYEY 283 (496)
Q Consensus 210 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~---~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~--~~~lV~e~ 283 (496)
...||+|+|-+||||.+. +|..||=-.++ ........+.|..|+.+++.|+||||+++|+++.+.. ...+|+|.
T Consensus 45 ~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTEL 124 (632)
T KOG0584|consen 45 DEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITEL 124 (632)
T ss_pred hhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeeec
Confidence 456999999999999654 46665532222 2334455688999999999999999999999997754 58899999
Q ss_pred cCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCC-CCeEEccccccccccCCC
Q 011005 284 MERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSK-LEAFVADFGTARLLHADS 362 (496)
Q Consensus 284 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~-~~~kl~Dfg~~~~~~~~~ 362 (496)
+..|+|..|+.+.+ ..+.....+|++||++||.|||++ ..+|+|||||-+|||++.+ |.|||+|+|+|+......
T Consensus 125 ~TSGtLr~Y~kk~~---~vn~kaik~W~RQILkGL~yLHs~-~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s~ 200 (632)
T KOG0584|consen 125 FTSGTLREYRKKHR---RVNIKAIKSWCRQILKGLVYLHSQ-DPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKSH 200 (632)
T ss_pred ccCCcHHHHHHHhc---cCCHHHHHHHHHHHHHHhhhhhcC-CCCccccccccceEEEcCCcCceeecchhHHHHhhccc
Confidence 99999999999876 678899999999999999999998 7899999999999999865 899999999999875443
Q ss_pred CCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHHH
Q 011005 363 SNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVIR 442 (496)
Q Consensus 363 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (496)
. ...+|||.|||||... ..|++.+||||||+.++||+|+..||.. -..+......+..+..|..... -
T Consensus 201 a--ksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsE------C~n~AQIYKKV~SGiKP~sl~k---V 268 (632)
T KOG0584|consen 201 A--KSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSE------CTNPAQIYKKVTSGIKPAALSK---V 268 (632)
T ss_pred c--ceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhh------hCCHHHHHHHHHcCCCHHHhhc---c
Confidence 2 3378999999999877 7899999999999999999999999852 1222233334444443332221 1
Q ss_pred HHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCC
Q 011005 443 DILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTP 479 (496)
Q Consensus 443 ~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~ 479 (496)
....+.++|.+|+.. .++|||+.|+|++.|+.....
T Consensus 269 ~dPevr~fIekCl~~-~~~R~sa~eLL~d~Ff~~d~g 304 (632)
T KOG0584|consen 269 KDPEVREFIEKCLAT-KSERLSAKELLKDPFFDEDGG 304 (632)
T ss_pred CCHHHHHHHHHHhcC-chhccCHHHHhhChhhccccc
Confidence 133578999999999 899999999999999987643
No 294
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=1.4e-37 Score=292.79 Aligned_cols=250 Identities=29% Similarity=0.454 Sum_probs=200.0
Q ss_pred CCCcceeeecCCeeEEEEEeCC-----CcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEE
Q 011005 207 FDIRYCIGTGGYGSVYKAQLPN-----GKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIY 281 (496)
Q Consensus 207 ~~~~~~lg~G~~g~Vy~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~ 281 (496)
|++.+.||.|+||.||+|...+ +..||+|.+.........+.+..|+.+++.++|+||+++++++...+..+++|
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~ 80 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVM 80 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEE
Confidence 4567889999999999997653 48899999977654445678899999999999999999999999999999999
Q ss_pred EecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCC
Q 011005 282 EYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHAD 361 (496)
Q Consensus 282 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 361 (496)
||+++++|.+++...... .+++..+..++.|++.||++|| +.+++|+||+|+||++++++.++|+|||++......
T Consensus 81 e~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~ql~~~l~~lh---~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~ 156 (258)
T smart00219 81 EYMEGGDLLDYLRKNRPK-ELSLSDLLSFALQIARGMEYLE---SKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDD 156 (258)
T ss_pred eccCCCCHHHHHHhhhhc-cCCHHHHHHHHHHHHHHHHHHh---cCCeeecccccceEEEccCCeEEEcccCCceecccc
Confidence 999999999998764421 2899999999999999999999 789999999999999999999999999999876543
Q ss_pred CCCcc-ccccccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccCCCCCCcchhHhhhcCCCCCCCChh
Q 011005 362 SSNRT-LLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRK 439 (496)
Q Consensus 362 ~~~~~-~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 439 (496)
..... ...+++.|+|||.+.+..++.++||||+|+++|+|++ |+.||.... ...................
T Consensus 157 ~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~-------~~~~~~~~~~~~~~~~~~~- 228 (258)
T smart00219 157 DYYKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMS-------NEEVLEYLKKGYRLPKPEN- 228 (258)
T ss_pred cccccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCC-------HHHHHHHHhcCCCCCCCCc-
Confidence 22111 2236789999999988889999999999999999998 788875311 1111111111111111111
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 011005 440 VIRDILLISTVSFACLQSNPKSRPTMQSVSQE 471 (496)
Q Consensus 440 ~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 471 (496)
....+.+++.+|+..||++|||+.|+++.
T Consensus 229 ---~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~ 257 (258)
T smart00219 229 ---CPPEIYKLMLQCWAEDPEDRPTFSELVEI 257 (258)
T ss_pred ---CCHHHHHHHHHHCcCChhhCcCHHHHHhh
Confidence 23357789999999999999999999875
No 295
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=1.4e-37 Score=291.72 Aligned_cols=246 Identities=26% Similarity=0.409 Sum_probs=196.4
Q ss_pred ceeeecCCeeEEEEEeCCCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEecCCCChh
Q 011005 211 YCIGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEYMERGSLF 290 (496)
Q Consensus 211 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~~~~g~L~ 290 (496)
+.||+|+||.||+|..++++.|++|.+...........+.+|++++++++|+||+++++++......++||||+++++|.
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~ 80 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLL 80 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHH
Confidence 36899999999999887799999999876544344567899999999999999999999999999999999999999999
Q ss_pred hhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCCCc--ccc
Q 011005 291 CNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNR--TLL 368 (496)
Q Consensus 291 ~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~--~~~ 368 (496)
+++..... .+++..+..++.+++.|++||| +.+++||||+|+||+++.++.++|+|||.+.......... ...
T Consensus 81 ~~l~~~~~--~~~~~~~~~~~~~~~~~l~~lH---~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~ 155 (251)
T cd05041 81 TFLRKKKN--RLTVKKLLQMSLDAAAGMEYLE---SKNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLK 155 (251)
T ss_pred HHHHhcCC--CCCHHHHHHHHHHHHHHHHHHH---hCCEehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccccC
Confidence 99875432 5788999999999999999999 7799999999999999999999999999997654221111 112
Q ss_pred ccccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHHHHHHHH
Q 011005 369 AGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVIRDILLI 447 (496)
Q Consensus 369 ~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 447 (496)
..+..|+|||.+.+..++.++||||||+++|+|++ |..||..... ................. .....+
T Consensus 156 ~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~--------~~~~~~~~~~~~~~~~~---~~~~~~ 224 (251)
T cd05041 156 QIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSN--------QQTRERIESGYRMPAPQ---LCPEEI 224 (251)
T ss_pred cceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCH--------HHHHHHHhcCCCCCCCc---cCCHHH
Confidence 23567999999998899999999999999999999 8888853221 11111121111111111 112357
Q ss_pred HHHHHhcccCCCCCCCCHHHHHHHH
Q 011005 448 STVSFACLQSNPKSRPTMQSVSQEF 472 (496)
Q Consensus 448 ~~li~~cl~~dP~~Rps~~evl~~~ 472 (496)
.+++.+||+.+|++|||+.|+++.+
T Consensus 225 ~~li~~~l~~~p~~Rp~~~ell~~l 249 (251)
T cd05041 225 YRLMLQCWAYDPENRPSFSEIYNEL 249 (251)
T ss_pred HHHHHHHhccChhhCcCHHHHHHHh
Confidence 8899999999999999999999876
No 296
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=1.4e-37 Score=293.74 Aligned_cols=249 Identities=25% Similarity=0.369 Sum_probs=190.4
Q ss_pred ceeeecCCeeEEEEEeC----CCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceee-cCCeEEEEEEecC
Q 011005 211 YCIGTGGYGSVYKAQLP----NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCL-HKKCMFLIYEYME 285 (496)
Q Consensus 211 ~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~-~~~~~~lV~e~~~ 285 (496)
+.||+|+||.||+|.+. ++..||+|.+.........+.+.+|+.+++.++||||+++++++. .+...++||||+.
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~ 80 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK 80 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence 35899999999999753 245799999865444444567889999999999999999999775 4556789999999
Q ss_pred CCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCC--
Q 011005 286 RGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSS-- 363 (496)
Q Consensus 286 ~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-- 363 (496)
+|+|.+++..... ..++..+..++.|++.||+||| ..+++||||||+||++++++.+||+|||+++.......
T Consensus 81 ~~~L~~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~ 155 (262)
T cd05058 81 HGDLRNFIRSETH--NPTVKDLIGFGLQVAKGMEYLA---SKKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYS 155 (262)
T ss_pred CCCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHH---hCCccccccCcceEEEcCCCcEEECCccccccccCCccee
Confidence 9999999875432 4577888899999999999999 77999999999999999999999999999976543211
Q ss_pred --CccccccccccccccccccCCcCcccchhhHHHHHHHHHhC-CCCCccccccCCCCCCcchhHhhhcCCCCCCCChhH
Q 011005 364 --NRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMG-KHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKV 440 (496)
Q Consensus 364 --~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 440 (496)
......+++.|+|||.+.+..++.++||||||+++|||++| .+||.... ............... ...
T Consensus 156 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~-------~~~~~~~~~~~~~~~-~~~-- 225 (262)
T cd05058 156 VHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVD-------SFDITVYLLQGRRLL-QPE-- 225 (262)
T ss_pred ecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCC-------HHHHHHHHhcCCCCC-CCC--
Confidence 11123456789999999888999999999999999999995 55554211 111111121111111 111
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHh
Q 011005 441 IRDILLISTVSFACLQSNPKSRPTMQSVSQEFLIT 475 (496)
Q Consensus 441 ~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~ 475 (496)
..+..+.+++.+||+.+|++||++.|+++.+...
T Consensus 226 -~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~ 259 (262)
T cd05058 226 -YCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQI 259 (262)
T ss_pred -cCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence 1123477899999999999999999999987643
No 297
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=1.4e-37 Score=300.66 Aligned_cols=256 Identities=28% Similarity=0.369 Sum_probs=202.4
Q ss_pred hCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccch--hHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEE
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIY 281 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~ 281 (496)
..|.+.+.||+|+||+||+|... +++.||+|.+.... .....+.+.+|+++++.++||||+++++++..++..++|+
T Consensus 15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~ 94 (307)
T cd06607 15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVM 94 (307)
T ss_pred hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEH
Confidence 56888899999999999999764 68999999886432 2233467889999999999999999999999999999999
Q ss_pred EecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCC
Q 011005 282 EYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHAD 361 (496)
Q Consensus 282 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 361 (496)
||+. |++.+.+.... ..+++..+..++.|++.||.||| +.+++||||+|+||++++++.++|+|||++......
T Consensus 95 e~~~-g~l~~~~~~~~--~~l~~~~~~~~~~ql~~~L~~LH---~~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~ 168 (307)
T cd06607 95 EYCL-GSASDILEVHK--KPLQEVEIAAICHGALQGLAYLH---SHERIHRDIKAGNILLTEPGTVKLADFGSASLVSPA 168 (307)
T ss_pred HhhC-CCHHHHHHHcc--cCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCcccEEECCCCCEEEeecCcceecCCC
Confidence 9997 57776665432 25889999999999999999999 779999999999999999999999999998755322
Q ss_pred CCCccccccccccccccccc---cCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCCh
Q 011005 362 SSNRTLLAGTYGYIAPELAY---TMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDR 438 (496)
Q Consensus 362 ~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (496)
....+++.|+|||.+. ...++.++||||||+++|||++|+.||..... ............+...
T Consensus 169 ----~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~-------~~~~~~~~~~~~~~~~-- 235 (307)
T cd06607 169 ----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA-------MSALYHIAQNDSPTLS-- 235 (307)
T ss_pred ----CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccH-------HHHHHHHhcCCCCCCC--
Confidence 2346788999999874 45688899999999999999999999853221 1111111111111111
Q ss_pred hHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCCC
Q 011005 439 KVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTPL 480 (496)
Q Consensus 439 ~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~~ 480 (496)
.......+.+++.+||+.||++||++.++++|+|+.+..+.
T Consensus 236 -~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~~ 276 (307)
T cd06607 236 -SNDWSDYFRNFVDSCLQKIPQDRPSSEELLKHRFVLRERPP 276 (307)
T ss_pred -chhhCHHHHHHHHHHhcCChhhCcCHHHHhcChhhcccCCc
Confidence 11123357899999999999999999999999999887653
No 298
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=2.2e-37 Score=293.74 Aligned_cols=255 Identities=27% Similarity=0.400 Sum_probs=200.6
Q ss_pred HhCCCCcceeeecCCeeEEEEEeCC----CcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEE
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLPN----GKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFL 279 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 279 (496)
.++|.+.+.||+|+||.||+|.+.+ ...|++|...........+.+.+|+.++++++||||+++++++... ..++
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~-~~~l 83 (270)
T cd05056 5 REDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITEN-PVWI 83 (270)
T ss_pred hhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcCC-CcEE
Confidence 3568889999999999999997543 3468999887655444557789999999999999999999988764 5679
Q ss_pred EEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEcccccccccc
Q 011005 280 IYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLH 359 (496)
Q Consensus 280 V~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 359 (496)
||||+++|+|.+++..... .+++..++.++.|++.||+||| +.+++|+||||+||+++.++.++|+|||+++...
T Consensus 84 v~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~l~~~l~~lH---~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~ 158 (270)
T cd05056 84 VMELAPLGELRSYLQVNKY--SLDLASLILYSYQLSTALAYLE---SKRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLE 158 (270)
T ss_pred EEEcCCCCcHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHH---hCCeeccccChheEEEecCCCeEEccCceeeecc
Confidence 9999999999999976432 5799999999999999999999 7899999999999999999999999999998764
Q ss_pred CCCCC-ccccccccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccCCCCCCcchhHhhhc-CCCCCCC
Q 011005 360 ADSSN-RTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSSDPKIMLIDVLD-QRLPPPV 436 (496)
Q Consensus 360 ~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 436 (496)
..... .....++..|+|||.+....++.++||||||+++||+++ |+.||..... ......... ...+.+.
T Consensus 159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~-------~~~~~~~~~~~~~~~~~ 231 (270)
T cd05056 159 DESYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKN-------NDVIGRIENGERLPMPP 231 (270)
T ss_pred cccceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCH-------HHHHHHHHcCCcCCCCC
Confidence 43211 112234568999999988889999999999999999986 9999863321 111111111 1111111
Q ss_pred ChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhc
Q 011005 437 DRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITR 476 (496)
Q Consensus 437 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~ 476 (496)
.....+.+++.+|+..+|++|||+.++++.+....
T Consensus 232 -----~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~ 266 (270)
T cd05056 232 -----NCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDIL 266 (270)
T ss_pred -----CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 11235778999999999999999999999886643
No 299
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=1.4e-37 Score=293.57 Aligned_cols=239 Identities=22% Similarity=0.320 Sum_probs=186.0
Q ss_pred ceeeecCCeeEEEEEeCC-------------CcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeE
Q 011005 211 YCIGTGGYGSVYKAQLPN-------------GKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCM 277 (496)
Q Consensus 211 ~~lg~G~~g~Vy~~~~~~-------------~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 277 (496)
+.||+|+||.||+|.... ...|++|.+.... ......+.+|+.+++.++||||+++++++..+...
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~-~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~ 79 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSH-RDISLAFFETASMMRQVSHKHIVLLYGVCVRDVEN 79 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhh-hhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCC
Confidence 358999999999997532 2358888876543 23446788899999999999999999999998889
Q ss_pred EEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCC-------eEEc
Q 011005 278 FLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLE-------AFVA 350 (496)
Q Consensus 278 ~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~-------~kl~ 350 (496)
++||||+++|+|..++.... ..+++..++.++.||+.||+||| +++++||||||+||+++.++. ++++
T Consensus 80 ~lv~e~~~~~~l~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~ 154 (262)
T cd05077 80 IMVEEFVEFGPLDLFMHRKS--DVLTTPWKFKVAKQLASALSYLE---DKDLVHGNVCTKNILLAREGIDGECGPFIKLS 154 (262)
T ss_pred EEEEecccCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHhh---hCCeECCCCCcccEEEecCCccCCCCceeEeC
Confidence 99999999999988886533 25889999999999999999999 789999999999999987654 8999
Q ss_pred cccccccccCCCCCccccccccccccccccc-cCCcCcccchhhHHHHHHHHH-hCCCCCccccccCCCCCCcchhHhhh
Q 011005 351 DFGTARLLHADSSNRTLLAGTYGYIAPELAY-TMVMTEKCDVYSFGVVTLEVL-MGKHPRDILSSLSSSSDPKIMLIDVL 428 (496)
Q Consensus 351 Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DvwslG~il~el~-~g~~p~~~~~~~~~~~~~~~~~~~~~ 428 (496)
|||++...... ....++..|+|||.+. +..++.++||||||+++|||+ +|..|+..... .......
T Consensus 155 d~g~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~--------~~~~~~~ 222 (262)
T cd05077 155 DPGIPITVLSR----QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTL--------AEKERFY 222 (262)
T ss_pred CCCCCccccCc----ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcch--------hHHHHHH
Confidence 99998655322 2345778899999887 567889999999999999998 58888753211 0111111
Q ss_pred cCCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHH
Q 011005 429 DQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEF 472 (496)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~ 472 (496)
......... ....+.+++.+||+.||++||++.++++++
T Consensus 223 ~~~~~~~~~-----~~~~~~~li~~cl~~dp~~Rp~~~~il~~~ 261 (262)
T cd05077 223 EGQCMLVTP-----SCKELADLMTHCMNYDPNQRPFFRAIMRDI 261 (262)
T ss_pred hcCccCCCC-----ChHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence 111111000 123477899999999999999999999875
No 300
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=8.5e-38 Score=300.67 Aligned_cols=265 Identities=25% Similarity=0.333 Sum_probs=203.7
Q ss_pred HhCCCCcceeeecCCeeEEEEEeCC-CcEEEEEEcccchhHHHHHHHHHHHHHHHhhc-ccccccccceeecCCeEEEEE
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLPN-GKVFALKKLHTSEELAFIKSFKNEAQVLSQVL-HRNIVKLYGYCLHKKCMFLIY 281 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lV~ 281 (496)
.++|++.+.||+|+||.||+|.+++ ++.||||.++..........+.+|+.++.+.. |+||+++++++..+...++||
T Consensus 14 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~ 93 (296)
T cd06618 14 LNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICM 93 (296)
T ss_pred cchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEe
Confidence 3678899999999999999998764 89999999976543333456677787777775 999999999999999999999
Q ss_pred EecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCC
Q 011005 282 EYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHAD 361 (496)
Q Consensus 282 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 361 (496)
||+. +++.+.+..... .+++..+..++.|++.|++|||+ ..+++||||+|+||++++++.++|+|||++......
T Consensus 94 e~~~-~~l~~l~~~~~~--~l~~~~~~~i~~~i~~~l~~lH~--~~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~ 168 (296)
T cd06618 94 ELMS-TCLDKLLKRIQG--PIPEDILGKMTVAIVKALHYLKE--KHGVIHRDVKPSNILLDASGNVKLCDFGISGRLVDS 168 (296)
T ss_pred eccC-cCHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHh--hCCEecCCCcHHHEEEcCCCCEEECccccchhccCC
Confidence 9985 477766654322 68899999999999999999994 258999999999999999999999999999766432
Q ss_pred CCCccccccccccccccccccCC----cCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCC
Q 011005 362 SSNRTLLAGTYGYIAPELAYTMV----MTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVD 437 (496)
Q Consensus 362 ~~~~~~~~gt~~y~aPE~~~~~~----~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (496)
.. .....+++.|+|||.+.+.. ++.++||||||+++|+|++|+.||..... .............+....
T Consensus 169 ~~-~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~------~~~~~~~~~~~~~~~~~~ 241 (296)
T cd06618 169 KA-KTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKT------EFEVLTKILQEEPPSLPP 241 (296)
T ss_pred Cc-ccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchh------HHHHHHHHhcCCCCCCCC
Confidence 22 22345778999999987654 78899999999999999999999863211 111122222222111110
Q ss_pred hhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCCCCC
Q 011005 438 RKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTPLVK 482 (496)
Q Consensus 438 ~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~~~~ 482 (496)
. ......+.+++.+||+.||++||++.++++++|+....+...
T Consensus 242 ~--~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~~~~ 284 (296)
T cd06618 242 N--EGFSPDFCSFVDLCLTKDHRKRPKYRELLQHPFIRRYETAEV 284 (296)
T ss_pred C--CCCCHHHHHHHHHHccCChhhCCCHHHHhcChhhhccchhHH
Confidence 0 012235789999999999999999999999999987655543
No 301
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=8e-38 Score=299.91 Aligned_cols=255 Identities=24% Similarity=0.390 Sum_probs=205.0
Q ss_pred cceeeecCCeeEEEEEe-CCCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEecCCCC
Q 011005 210 RYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEYMERGS 288 (496)
Q Consensus 210 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~~~~g~ 288 (496)
...||+|+||.||+|.. .+++.||+|++..... .....+.+|+.+++.++|+|++++++++...+..++||||+++++
T Consensus 25 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 103 (292)
T cd06657 25 FIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQ-QRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGA 103 (292)
T ss_pred HHHcCCCCCeEEEEEEEcCCCeEEEEEEecccch-hHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCc
Confidence 35699999999999976 4789999998865332 234668899999999999999999999999999999999999999
Q ss_pred hhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCCCcccc
Q 011005 289 LFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLL 368 (496)
Q Consensus 289 L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 368 (496)
|.+++... .+++..+..++.|++.|++||| ..|++||||+|+||+++.++.++|+|||++.............
T Consensus 104 L~~~~~~~----~~~~~~~~~~~~ql~~~l~~lH---~~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~~~~~~ 176 (292)
T cd06657 104 LTDIVTHT----RMNEEQIAAVCLAVLKALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSL 176 (292)
T ss_pred HHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEEcccccceeccccccccccc
Confidence 99887543 5788999999999999999999 7799999999999999999999999999987665433333445
Q ss_pred ccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHHHHHHHHH
Q 011005 369 AGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVIRDILLIS 448 (496)
Q Consensus 369 ~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 448 (496)
.+++.|+|||.+.+..++.++|+||+|+++|+|++|..||..... ...........+..... .......+.
T Consensus 177 ~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~--------~~~~~~~~~~~~~~~~~-~~~~~~~l~ 247 (292)
T cd06657 177 VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP--------LKAMKMIRDNLPPKLKN-LHKVSPSLK 247 (292)
T ss_pred ccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--------HHHHHHHHhhCCcccCC-cccCCHHHH
Confidence 688999999999888899999999999999999999999853211 11111111112111111 111223467
Q ss_pred HHHHhcccCCCCCCCCHHHHHHHHHHhccCCCC
Q 011005 449 TVSFACLQSNPKSRPTMQSVSQEFLITRKTPLV 481 (496)
Q Consensus 449 ~li~~cl~~dP~~Rps~~evl~~~~~~~~~~~~ 481 (496)
+++.+||+.||.+||++.++++|.|+.+..+..
T Consensus 248 ~li~~~l~~~P~~R~~~~~ll~~~~~~~~~~~~ 280 (292)
T cd06657 248 GFLDRLLVRDPAQRATAAELLKHPFLAKAGPPS 280 (292)
T ss_pred HHHHHHHhCCcccCcCHHHHhcChHHhccCCCc
Confidence 889999999999999999999999999887644
No 302
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=3.7e-38 Score=301.20 Aligned_cols=263 Identities=23% Similarity=0.284 Sum_probs=198.5
Q ss_pred CCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchh-HHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEec
Q 011005 207 FDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEE-LAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEYM 284 (496)
Q Consensus 207 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~~ 284 (496)
|++.+.||.|++|.||+|..+ +|+.||+|++..... ......+.+|++++++++|+|++++++++..++..++||||+
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~ 80 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL 80 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc
Confidence 677889999999999999764 799999999875432 222356788999999999999999999999999999999999
Q ss_pred CCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCCC
Q 011005 285 ERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSN 364 (496)
Q Consensus 285 ~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 364 (496)
+ ++|.+++..... ..+++..+..++.|++.||+||| +.+++||||+|+||+++.++.++|+|||++.........
T Consensus 81 ~-~~l~~~~~~~~~-~~~~~~~~~~~~~~i~~~L~~lH---~~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~ 155 (283)
T cd07835 81 D-LDLKKYMDSSPL-TGLDPPLIKSYLYQLLQGIAYCH---SHRVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVRT 155 (283)
T ss_pred C-cCHHHHHhhCCC-CCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCHHHEEEcCCCcEEEeecccccccCCCccc
Confidence 5 689988876542 35899999999999999999999 779999999999999999999999999999765433322
Q ss_pred ccccccccccccccccccC-CcCcccchhhHHHHHHHHHhCCCCCccccccCC---------CCCCcc-----hhHhhhc
Q 011005 365 RTLLAGTYGYIAPELAYTM-VMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSS---------SSDPKI-----MLIDVLD 429 (496)
Q Consensus 365 ~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~---------~~~~~~-----~~~~~~~ 429 (496)
.....+++.|+|||++.+. .++.++||||+|+++|+|++|+.||........ ...... ...+...
T Consensus 156 ~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (283)
T cd07835 156 YTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYKP 235 (283)
T ss_pred cCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhhh
Confidence 3334568899999988764 568899999999999999999999863221000 000000 0000000
Q ss_pred ---CCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHH
Q 011005 430 ---QRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLI 474 (496)
Q Consensus 430 ---~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~ 474 (496)
.................+.+++.+||+.||++|||++|+++|+|+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~ 283 (283)
T cd07835 236 TFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQHPYF 283 (283)
T ss_pred hcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcCCCC
Confidence 000000000000111357789999999999999999999999875
No 303
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=9.2e-39 Score=311.47 Aligned_cols=270 Identities=25% Similarity=0.430 Sum_probs=219.8
Q ss_pred CCCCcceeeecCCeeEEEEEeC--CCc--EEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEE
Q 011005 206 DFDIRYCIGTGGYGSVYKAQLP--NGK--VFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIY 281 (496)
Q Consensus 206 ~~~~~~~lg~G~~g~Vy~~~~~--~~~--~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~ 281 (496)
+....++||+|.||+|++|.|+ +|+ .||||.++..........|.+|+.+|.+++|+|++++||...+ ....|||
T Consensus 111 ~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~ 189 (1039)
T KOG0199|consen 111 QIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVF 189 (1039)
T ss_pred HHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHh
Confidence 4455678999999999999775 344 5899999887655577899999999999999999999999987 5578999
Q ss_pred EecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCC
Q 011005 282 EYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHAD 361 (496)
Q Consensus 282 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 361 (496)
|.++.|+|.+.|++ .....|.......++.||+.|+.||. .+++|||||.++|+++-....|||+|||+.+-+...
T Consensus 190 ELaplGSLldrLrk-a~~~~llv~~Lcdya~QiA~aM~YLe---skrlvHRDLAARNlllasprtVKI~DFGLmRaLg~n 265 (1039)
T KOG0199|consen 190 ELAPLGSLLDRLRK-AKKAILLVSRLCDYAMQIAKAMQYLE---SKRLVHRDLAARNLLLASPRTVKICDFGLMRALGEN 265 (1039)
T ss_pred hhcccchHHHHHhh-ccccceeHHHHHHHHHHHHHHHHHHh---hhhhhhhhhhhhhheecccceeeeecccceeccCCC
Confidence 99999999999998 44557888999999999999999999 789999999999999999999999999999987654
Q ss_pred CCCccc---cccccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccCCCCCCcchhHhhhc--CCCCCC
Q 011005 362 SSNRTL---LAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSSDPKIMLIDVLD--QRLPPP 435 (496)
Q Consensus 362 ~~~~~~---~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 435 (496)
...+.+ ..-...|+|||.+.-..++.++|||+|||++|||+| |..||-... ...+.+.++ .+++.+
T Consensus 266 ed~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~--------g~qIL~~iD~~erLpRP 337 (1039)
T KOG0199|consen 266 EDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCR--------GIQILKNIDAGERLPRP 337 (1039)
T ss_pred CcceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCC--------HHHHHHhccccccCCCC
Confidence 443322 123458999999999999999999999999999998 778875322 222333333 233333
Q ss_pred CChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCCCCCcccccccchhh
Q 011005 436 VDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTPLVKHAAIQDISISE 493 (496)
Q Consensus 436 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~~~~~~~~~~i~~~~ 493 (496)
.. ....+.+++..||..+|++||||..+.+.++.....+..-.+.-..++.+.
T Consensus 338 k~-----csedIY~imk~cWah~paDRptFsair~~~~l~eaqp~~a~~~~d~~ep~a 390 (1039)
T KOG0199|consen 338 KY-----CSEDIYQIMKNCWAHNPADRPTFSAIREDLVLAEAQPAVARETYDSIEPGA 390 (1039)
T ss_pred CC-----ChHHHHHHHHHhccCCccccccHHHHHHhHHHHhcCCceeeeeccccCCCc
Confidence 22 233578999999999999999999999999988888877666666555543
No 304
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=1.6e-37 Score=292.83 Aligned_cols=237 Identities=27% Similarity=0.429 Sum_probs=187.6
Q ss_pred ceeeecCCeeEEEEEeCCCc-----------EEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEE
Q 011005 211 YCIGTGGYGSVYKAQLPNGK-----------VFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFL 279 (496)
Q Consensus 211 ~~lg~G~~g~Vy~~~~~~~~-----------~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 279 (496)
+.||+|+||.||+|.+.+.. .+++|.+...... ...+.+|+.+++.++||||+++++++.. ...++
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~--~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~l 77 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD--SLAFFETASLMSQLSHKHLVKLYGVCVR-DENIM 77 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh--HHHHHHHHHHHHcCCCcchhheeeEEec-CCcEE
Confidence 35899999999999775433 5778877654432 4678899999999999999999999988 77899
Q ss_pred EEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCC-------CeEEccc
Q 011005 280 IYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKL-------EAFVADF 352 (496)
Q Consensus 280 V~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~-------~~kl~Df 352 (496)
||||+++|+|.+++..... .+++..+..++.||+.||+||| +++++||||||+||+++.++ .++|+||
T Consensus 78 v~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Df 152 (259)
T cd05037 78 VEEYVKFGPLDVFLHREKN--NVSLHWKLDVAKQLASALHYLE---DKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDP 152 (259)
T ss_pred EEEcCCCCcHHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHh---hCCeecccCccceEEEecCccccCCceeEEeCCC
Confidence 9999999999999886543 5788999999999999999999 78999999999999999887 7999999
Q ss_pred cccccccCCCCCccccccccccccccccccC--CcCcccchhhHHHHHHHHHh-CCCCCccccccCCCCCCcchhHhhhc
Q 011005 353 GTARLLHADSSNRTLLAGTYGYIAPELAYTM--VMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSSDPKIMLIDVLD 429 (496)
Q Consensus 353 g~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~ 429 (496)
|++..... .....++..|+|||++.+. .++.++||||+|+++|+|++ |..||..... ........ ..
T Consensus 153 g~a~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~-----~~~~~~~~-~~ 222 (259)
T cd05037 153 GIPITVLS----REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSS-----SEKERFYQ-DQ 222 (259)
T ss_pred Cccccccc----ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCc-----hhHHHHHh-cC
Confidence 99976543 2234566789999999877 78899999999999999999 5777753321 00000111 11
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHH
Q 011005 430 QRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEF 472 (496)
Q Consensus 430 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~ 472 (496)
...+.+.. ..+.+++.+||..+|++|||+.++++.+
T Consensus 223 ~~~~~~~~-------~~~~~li~~~l~~~p~~Rpt~~~il~~l 258 (259)
T cd05037 223 HRLPMPDC-------AELANLINQCWTYDPTKRPSFRAILRDL 258 (259)
T ss_pred CCCCCCCc-------hHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence 11111111 3577999999999999999999999865
No 305
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=1.5e-37 Score=299.85 Aligned_cols=258 Identities=25% Similarity=0.407 Sum_probs=200.4
Q ss_pred HhCCCCcceeeecCCeeEEEEEeC-CCc----EEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEE
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLP-NGK----VFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMF 278 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~----~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 278 (496)
.++|+..+.||+|+||.||+|.+. ++. .||+|.+...........+.+|+.+++.++||||+++++++... ..+
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~ 84 (303)
T cd05110 6 ETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQ 84 (303)
T ss_pred hhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Cce
Confidence 356888899999999999999753 343 57889887654444445688999999999999999999998764 467
Q ss_pred EEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccc
Q 011005 279 LIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLL 358 (496)
Q Consensus 279 lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 358 (496)
+++||+++|+|.+++.... ..+++..+..++.|++.||.||| +.+++|+||||+||+++.++.+||+|||+++..
T Consensus 85 ~v~e~~~~g~l~~~~~~~~--~~~~~~~~~~~~~qi~~~L~~LH---~~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~ 159 (303)
T cd05110 85 LVTQLMPHGCLLDYVHEHK--DNIGSQLLLNWCVQIAKGMMYLE---ERRLVHRDLAARNVLVKSPNHVKITDFGLARLL 159 (303)
T ss_pred eeehhcCCCCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHh---hcCeeccccccceeeecCCCceEEccccccccc
Confidence 9999999999999987543 25788999999999999999999 789999999999999999999999999999876
Q ss_pred cCCCCC--ccccccccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccCCCCCCcchhHhhhcCCCCCC
Q 011005 359 HADSSN--RTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSSDPKIMLIDVLDQRLPPP 435 (496)
Q Consensus 359 ~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (496)
...... .....++..|+|||.+.+..++.++||||||+++||+++ |+.||.... .....+.+......+
T Consensus 160 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~--------~~~~~~~~~~~~~~~ 231 (303)
T cd05110 160 EGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIP--------TREIPDLLEKGERLP 231 (303)
T ss_pred cCcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCC--------HHHHHHHHHCCCCCC
Confidence 433221 122335678999999999999999999999999999997 899985321 111112222111111
Q ss_pred CChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccC
Q 011005 436 VDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKT 478 (496)
Q Consensus 436 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~ 478 (496)
... .....+.+++.+||..+|++||+++++++.+......
T Consensus 232 ~~~---~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~ 271 (303)
T cd05110 232 QPP---ICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMARD 271 (303)
T ss_pred CCC---CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 111 0122467889999999999999999999998765443
No 306
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=1.5e-37 Score=291.44 Aligned_cols=252 Identities=33% Similarity=0.475 Sum_probs=205.4
Q ss_pred CCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEec
Q 011005 206 DFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEYM 284 (496)
Q Consensus 206 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~~ 284 (496)
+|+..+.||+|++|.||++..+ +++.+++|++..... ...+.+.+|+++++.++|+|++++++.+......++++||+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~ 79 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESK-EKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFC 79 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccch-hHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecC
Confidence 4778899999999999999775 688999999977553 34567889999999999999999999999999999999999
Q ss_pred CCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCCC
Q 011005 285 ERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSN 364 (496)
Q Consensus 285 ~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 364 (496)
++++|.+.+.... ..+++..+..++.|++.|+.+|| ..+++||||+|+||++++++.++|+|||.+........
T Consensus 80 ~~~~L~~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lh---~~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~- 153 (253)
T cd05122 80 SGGSLKDLLKSTN--QTLTESQIAYVCKELLKGLEYLH---SNGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA- 153 (253)
T ss_pred CCCcHHHHHhhcC--CCCCHHHHHHHHHHHHHHHHHhh---cCCEecCCCCHHHEEEccCCeEEEeecccccccccccc-
Confidence 9999999987653 36899999999999999999999 78999999999999999999999999999987654332
Q ss_pred ccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHHHHH
Q 011005 365 RTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVIRDI 444 (496)
Q Consensus 365 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (496)
.....++..|+|||.+.+..++.++||||+|+++|+|++|+.||..... ......... ........ .....
T Consensus 154 ~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~-------~~~~~~~~~-~~~~~~~~-~~~~~ 224 (253)
T cd05122 154 RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPP-------MKALFKIAT-NGPPGLRN-PEKWS 224 (253)
T ss_pred ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCch-------HHHHHHHHh-cCCCCcCc-ccccC
Confidence 3345688899999999988899999999999999999999999863321 111111111 11111111 11112
Q ss_pred HHHHHHHHhcccCCCCCCCCHHHHHHHHH
Q 011005 445 LLISTVSFACLQSNPKSRPTMQSVSQEFL 473 (496)
Q Consensus 445 ~~l~~li~~cl~~dP~~Rps~~evl~~~~ 473 (496)
..+.+++.+||+.||++|||+.|+++|+|
T Consensus 225 ~~~~~~i~~~l~~~p~~R~t~~~~l~~~~ 253 (253)
T cd05122 225 DEFKDFLKKCLQKNPEKRPTAEQLLKHPF 253 (253)
T ss_pred HHHHHHHHHHccCChhhCCCHHHHhcCCC
Confidence 35788999999999999999999999876
No 307
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=1.9e-37 Score=305.65 Aligned_cols=264 Identities=24% Similarity=0.294 Sum_probs=200.1
Q ss_pred HHhCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccch-hHHHHHHHHHHHHHHHhhcccccccccceeecC------
Q 011005 203 ATEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSE-ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHK------ 274 (496)
Q Consensus 203 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~------ 274 (496)
..++|+..+.||+|+||.||+|... +++.||+|.+.... .......+.+|+.++++++|+||+++++++...
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 93 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF 93 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence 4578999999999999999999754 78999999986532 223345677899999999999999999988643
Q ss_pred CeEEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccc
Q 011005 275 KCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGT 354 (496)
Q Consensus 275 ~~~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~ 354 (496)
...++||||+. ++|.+.+.. .++...+..++.|++.||+||| ..|++||||||+||+++.++.++|+|||+
T Consensus 94 ~~~~lv~e~~~-~~l~~~~~~-----~l~~~~~~~~~~ql~~aL~~LH---~~gi~H~dlkp~Nil~~~~~~~kL~Dfg~ 164 (353)
T cd07850 94 QDVYLVMELMD-ANLCQVIQM-----DLDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGL 164 (353)
T ss_pred CcEEEEEeccC-CCHHHHHhh-----cCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEECCCCCEEEccCcc
Confidence 35799999996 488877754 2788889999999999999999 77999999999999999999999999999
Q ss_pred cccccCCCCCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCC-------CCCCcch----
Q 011005 355 ARLLHADSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSS-------SSDPKIM---- 423 (496)
Q Consensus 355 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~-------~~~~~~~---- 423 (496)
++...... ......+++.|+|||.+.+..++.++||||+|+++|+|++|+.||........ ...+...
T Consensus 165 ~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (353)
T cd07850 165 ARTAGTSF-MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSR 243 (353)
T ss_pred ceeCCCCC-CCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHH
Confidence 98764322 22334578899999999999999999999999999999999999863221000 0000000
Q ss_pred ----hHhhhcCCC----------------CCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhc
Q 011005 424 ----LIDVLDQRL----------------PPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITR 476 (496)
Q Consensus 424 ----~~~~~~~~~----------------~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~ 476 (496)
.......+. +.............+.+++.+||+.||++|||+.|+++|+|+..
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~~~~~~ 316 (353)
T cd07850 244 LQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQHPYINV 316 (353)
T ss_pred hhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcChhHhh
Confidence 000000000 00000001112334679999999999999999999999999864
No 308
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=5.2e-38 Score=302.09 Aligned_cols=266 Identities=22% Similarity=0.253 Sum_probs=197.8
Q ss_pred hCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchh-HHHHHHHHHHHHHHHhhc-ccccccccceeecCCe-----
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEE-LAFIKSFKNEAQVLSQVL-HRNIVKLYGYCLHKKC----- 276 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~----- 276 (496)
++|++.+.||+|+||.||+|... +++.||+|.+..... ......+.+|+.+++.+. |+||+++++++...+.
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 46888999999999999999764 689999998865432 122356788999999995 6999999999877655
Q ss_pred EEEEEEecCCCChhhhhhCCCC--CccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecC-CCCeEEcccc
Q 011005 277 MFLIYEYMERGSLFCNLHNNED--AVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNS-KLEAFVADFG 353 (496)
Q Consensus 277 ~~lV~e~~~~g~L~~~l~~~~~--~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~-~~~~kl~Dfg 353 (496)
.++||||+++ +|.+++..... ...+++..++.++.||+.||.||| ..+++||||+|+||+++. ++.++|+|||
T Consensus 81 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH---~~~i~H~dl~~~nil~~~~~~~~kl~dfg 156 (295)
T cd07837 81 LYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCH---KHGVMHRDLKPQNLLVDKQKGLLKIADLG 156 (295)
T ss_pred EEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCChHHEEEecCCCeEEEeecc
Confidence 8999999986 78888765432 236899999999999999999999 789999999999999998 8899999999
Q ss_pred ccccccCCCCCcccccccccccccccccc-CCcCcccchhhHHHHHHHHHhCCCCCccccccCCC-------CCCc-ch-
Q 011005 354 TARLLHADSSNRTLLAGTYGYIAPELAYT-MVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSS-------SDPK-IM- 423 (496)
Q Consensus 354 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~-------~~~~-~~- 423 (496)
++..+...........+++.|+|||.+.+ ..++.++||||+|+++|+|++|..||......... ..+. ..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (295)
T cd07837 157 LGRAFSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVW 236 (295)
T ss_pred cceecCCCccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChhhC
Confidence 99866443333333456889999998865 45789999999999999999999998632211000 0000 00
Q ss_pred --hHhh-----hcCCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHH
Q 011005 424 --LIDV-----LDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLI 474 (496)
Q Consensus 424 --~~~~-----~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~ 474 (496)
.... .....+.............+.+++.+||++||.+||++.|++.|+|+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~~~~ 294 (295)
T cd07837 237 PGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTHPYF 294 (295)
T ss_pred cchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcCCCc
Confidence 0000 00000000000001122347789999999999999999999999986
No 309
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=2e-37 Score=293.86 Aligned_cols=254 Identities=25% Similarity=0.415 Sum_probs=199.8
Q ss_pred CCCCcceeeecCCeeEEEEEeCC--CcEEEEEEcccc---------hhHHHHHHHHHHHHHHHh-hcccccccccceeec
Q 011005 206 DFDIRYCIGTGGYGSVYKAQLPN--GKVFALKKLHTS---------EELAFIKSFKNEAQVLSQ-VLHRNIVKLYGYCLH 273 (496)
Q Consensus 206 ~~~~~~~lg~G~~g~Vy~~~~~~--~~~vavK~~~~~---------~~~~~~~~~~~e~~~l~~-l~h~niv~~~~~~~~ 273 (496)
+|++.+.||+|+||.||+|..+. ++.+|+|.+... ........+.+|+.++.+ ++|+||+++++++..
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 47888999999999999998764 788999987532 122334556788888875 689999999999999
Q ss_pred CCeEEEEEEecCCCChhhhhhCC-CCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccc
Q 011005 274 KKCMFLIYEYMERGSLFCNLHNN-EDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADF 352 (496)
Q Consensus 274 ~~~~~lV~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Df 352 (496)
++..++||||+++++|.+++... .....+++..++.++.|++.||.|||+ ..+++|+||+|+||+++.++.++|+||
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~--~~~i~H~dl~~~nil~~~~~~~~l~df 158 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHK--EKRIVHRDLTPNNIMLGEDDKVTITDF 158 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhcc--CCceeecCCCHHHEEECCCCcEEEecc
Confidence 99999999999999999887542 223368899999999999999999994 358999999999999999999999999
Q ss_pred cccccccCCCCCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCC
Q 011005 353 GTARLLHADSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRL 432 (496)
Q Consensus 353 g~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (496)
|.+....... ......++..|+|||.+.+..++.++||||||+++|+|++|+.||.... .............
T Consensus 159 g~~~~~~~~~-~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~-------~~~~~~~~~~~~~ 230 (269)
T cd08528 159 GLAKQKQPES-KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTN-------MLSLATKIVEAVY 230 (269)
T ss_pred cceeeccccc-ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccC-------HHHHHHHHhhccC
Confidence 9998764433 3344568889999999999889999999999999999999999985321 1111112222222
Q ss_pred CCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHH
Q 011005 433 PPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEF 472 (496)
Q Consensus 433 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~ 472 (496)
.+.... .....+.+++.+||+.||++||++.|+.+++
T Consensus 231 ~~~~~~---~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~ 267 (269)
T cd08528 231 EPLPEG---MYSEDVTDVITSCLTPDAEARPDIIQVSAMI 267 (269)
T ss_pred CcCCcc---cCCHHHHHHHHHHCCCCCccCCCHHHHHHHh
Confidence 111110 1123477899999999999999999998876
No 310
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-38 Score=314.30 Aligned_cols=255 Identities=26% Similarity=0.448 Sum_probs=209.4
Q ss_pred CCCcceeeecCCeeEEEEEe-CCCc----EEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEE
Q 011005 207 FDIRYCIGTGGYGSVYKAQL-PNGK----VFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIY 281 (496)
Q Consensus 207 ~~~~~~lg~G~~g~Vy~~~~-~~~~----~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~ 281 (496)
....+.||+|+||+||||.+ +.|+ +||+|++......+...++.+|+.+|.+++|||+++++++|.... +.||+
T Consensus 698 lkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvt 776 (1177)
T KOG1025|consen 698 LKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVT 776 (1177)
T ss_pred hhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHH
Confidence 34467899999999999954 4444 689999988776667789999999999999999999999998776 78999
Q ss_pred EecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCC
Q 011005 282 EYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHAD 361 (496)
Q Consensus 282 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 361 (496)
+|++.|+|.++++.+++ .+.....+.|+.||++|+.||| .+.++||||.++|||+..-..+||+|||+++....+
T Consensus 777 q~mP~G~LlDyvr~hr~--~igsq~lLnw~~QIAkgM~YLe---~qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d 851 (1177)
T KOG1025|consen 777 QLMPLGCLLDYVREHRD--NIGSQDLLNWCYQIAKGMKYLE---EQRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPD 851 (1177)
T ss_pred HhcccchHHHHHHHhhc--cccHHHHHHHHHHHHHHHHHHH---hcchhhhhhhhhheeecCCCeEEEEecchhhccCcc
Confidence 99999999999997654 6778889999999999999999 789999999999999999999999999999988776
Q ss_pred CCCccccc--cccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccCCCCCCcchhHhhhc--CCCCCCC
Q 011005 362 SSNRTLLA--GTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSSDPKIMLIDVLD--QRLPPPV 436 (496)
Q Consensus 362 ~~~~~~~~--gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 436 (496)
........ -.+.|||-|.+.-..|+.++|||||||++||++| |..|++.... ..+.+.+. .+++.+.
T Consensus 852 ~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~--------~eI~dlle~geRLsqPp 923 (1177)
T KOG1025|consen 852 EKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPA--------EEIPDLLEKGERLSQPP 923 (1177)
T ss_pred cccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCH--------HHhhHHHhccccCCCCC
Confidence 65544333 3468999999999999999999999999999998 8889864321 12222222 2333222
Q ss_pred ChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCCC
Q 011005 437 DRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTPL 480 (496)
Q Consensus 437 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~~ 480 (496)
.....+..++.+||..|++.||+++++..++-...+.|.
T Consensus 924 -----iCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ardpq 962 (1177)
T KOG1025|consen 924 -----ICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMARDPQ 962 (1177)
T ss_pred -----CccHHHHHHHHHHhccCcccCccHHHHHHHHHHHhcCcc
Confidence 223346778889999999999999999999877766554
No 311
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=9.9e-38 Score=295.94 Aligned_cols=248 Identities=27% Similarity=0.397 Sum_probs=194.0
Q ss_pred eeeecCCeeEEEEEeCC-------CcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEec
Q 011005 212 CIGTGGYGSVYKAQLPN-------GKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEYM 284 (496)
Q Consensus 212 ~lg~G~~g~Vy~~~~~~-------~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~~ 284 (496)
.||+|+||.||+|..++ ++.+|+|.+...........+.+|+.+++.++||||+++++++...+..++||||+
T Consensus 2 ~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 81 (269)
T cd05044 2 FLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMELM 81 (269)
T ss_pred ccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEecc
Confidence 58999999999997643 25789998876543344567889999999999999999999999999999999999
Q ss_pred CCCChhhhhhCCC----CCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCC-----CeEEcccccc
Q 011005 285 ERGSLFCNLHNNE----DAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKL-----EAFVADFGTA 355 (496)
Q Consensus 285 ~~g~L~~~l~~~~----~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~-----~~kl~Dfg~~ 355 (496)
++++|.+++.... ....+++.+++.++.|++.||+||| +.+++|+||+|+||+++.++ .++++|||++
T Consensus 82 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~ 158 (269)
T cd05044 82 EGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLE---QMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLA 158 (269)
T ss_pred CCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHH---hCCcccCCCChheEEEecCCCCCCcceEECCcccc
Confidence 9999999987532 2234788999999999999999999 77999999999999999887 8999999999
Q ss_pred ccccCCCC--CccccccccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccCCCCCCcchhHhhhcCCC
Q 011005 356 RLLHADSS--NRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSSDPKIMLIDVLDQRL 432 (496)
Q Consensus 356 ~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (496)
........ ......++..|+|||.+.+..++.++||||||+++|+|++ |+.||..... . .....+....
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~-------~-~~~~~~~~~~ 230 (269)
T cd05044 159 RDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNN-------Q-EVLQHVTAGG 230 (269)
T ss_pred cccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCH-------H-HHHHHHhcCC
Confidence 76533221 1122345678999999999999999999999999999998 9999863221 1 1111111111
Q ss_pred CCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHH
Q 011005 433 PPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFL 473 (496)
Q Consensus 433 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~ 473 (496)
..... ......+.+++.+||+.+|.+||+++++++.+.
T Consensus 231 ~~~~~---~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 268 (269)
T cd05044 231 RLQKP---ENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQ 268 (269)
T ss_pred ccCCc---ccchHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 11111 112235779999999999999999999988763
No 312
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=7.7e-38 Score=306.11 Aligned_cols=272 Identities=24% Similarity=0.302 Sum_probs=205.6
Q ss_pred HhCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchh-HHHHHHHHHHHHHHHhhcccccccccceeec----CCeE
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEE-LAFIKSFKNEAQVLSQVLHRNIVKLYGYCLH----KKCM 277 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~----~~~~ 277 (496)
.++|++.+.||+|+||.||+|..+ +++.||+|++..... ....+.+.+|+.++++++||||+++++++.. ....
T Consensus 4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 83 (334)
T cd07855 4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDV 83 (334)
T ss_pred hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceE
Confidence 478999999999999999999754 689999999876432 2334567789999999999999999998763 3468
Q ss_pred EEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEcccccccc
Q 011005 278 FLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARL 357 (496)
Q Consensus 278 ~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 357 (496)
++||||+. ++|.+.+.... .+++..+..++.||+.||+||| ..+++||||||+||++++++.++|+|||++..
T Consensus 84 ~lv~e~~~-~~l~~~~~~~~---~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~ 156 (334)
T cd07855 84 YVVMDLME-SDLHHIIHSDQ---PLTEEHIRYFLYQLLRGLKYIH---SANVIHRDLKPSNLLVNEDCELRIGDFGMARG 156 (334)
T ss_pred EEEEehhh-hhHHHHhccCC---CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCcEEeccccccee
Confidence 99999996 58888886543 5899999999999999999999 77999999999999999999999999999976
Q ss_pred ccCCCCC----cccccccccccccccccc-CCcCcccchhhHHHHHHHHHhCCCCCccccccC---------CCCCC---
Q 011005 358 LHADSSN----RTLLAGTYGYIAPELAYT-MVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLS---------SSSDP--- 420 (496)
Q Consensus 358 ~~~~~~~----~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~---------~~~~~--- 420 (496)
....... .....++..|+|||.+.+ ..++.++||||+|+++|+|++|+.||....... .....
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~ 236 (334)
T cd07855 157 LSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVL 236 (334)
T ss_pred ecccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhh
Confidence 5432221 123468889999998765 468899999999999999999999996432100 00000
Q ss_pred ----cchhHhhh---cCCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCCCCC
Q 011005 421 ----KIMLIDVL---DQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTPLVK 482 (496)
Q Consensus 421 ----~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~~~~ 482 (496)
.....+.. ......+...........+.+++.+||+.||++|||++++++|+|+.+......
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~~~~~~~~~~ 305 (334)
T cd07855 237 NRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQHPFLAQYHDPDD 305 (334)
T ss_pred hhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhChhhhhccCCcc
Confidence 00000000 001111101101112345889999999999999999999999999977665554
No 313
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=2.4e-37 Score=293.89 Aligned_cols=238 Identities=22% Similarity=0.347 Sum_probs=184.6
Q ss_pred eeeecCCeeEEEEEeC-------------------------CCcEEEEEEcccchhHHHHHHHHHHHHHHHhhccccccc
Q 011005 212 CIGTGGYGSVYKAQLP-------------------------NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVK 266 (496)
Q Consensus 212 ~lg~G~~g~Vy~~~~~-------------------------~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~ 266 (496)
.||+|+||.||+|... ....|++|.+..... .....+.+|+.+++.++||||++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~-~~~~~~~~~~~~~~~l~h~niv~ 80 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHR-DIALAFFETASLMSQVSHIHLAF 80 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHH-HHHHHHHHHHHHHhcCCCCCeee
Confidence 5899999999999642 123588888865432 33466888999999999999999
Q ss_pred ccceeecCCeEEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCC-
Q 011005 267 LYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKL- 345 (496)
Q Consensus 267 ~~~~~~~~~~~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~- 345 (496)
+++++..+...++||||+++|+|..++.... ..+++..+..++.||+.||+||| .++++||||||+||+++..+
T Consensus 81 ~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~lH---~~~iiH~dlkp~Nill~~~~~ 155 (274)
T cd05076 81 VHGVCVRGSENIMVEEFVEHGPLDVCLRKEK--GRVPVAWKITVAQQLASALSYLE---DKNLVHGNVCAKNILLARLGL 155 (274)
T ss_pred EEEEEEeCCceEEEEecCCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHH---cCCccCCCCCcccEEEeccCc
Confidence 9999999999999999999999998886532 26788999999999999999999 78999999999999997643
Q ss_pred ------CeEEccccccccccCCCCCcccccccccccccccccc-CCcCcccchhhHHHHHHHHH-hCCCCCccccccCCC
Q 011005 346 ------EAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYT-MVMTEKCDVYSFGVVTLEVL-MGKHPRDILSSLSSS 417 (496)
Q Consensus 346 ------~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~el~-~g~~p~~~~~~~~~~ 417 (496)
.++++|||.+...... ....++..|+|||.+.+ ..++.++||||||+++||++ +|+.||.....
T Consensus 156 ~~~~~~~~kl~d~g~~~~~~~~----~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~---- 227 (274)
T cd05076 156 AEGTSPFIKLSDPGVSFTALSR----EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTP---- 227 (274)
T ss_pred ccCccceeeecCCccccccccc----cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccCh----
Confidence 3799999988654322 12356778999998875 56889999999999999985 69999863221
Q ss_pred CCCcchhHhhhcCCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHH
Q 011005 418 SDPKIMLIDVLDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEF 472 (496)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~ 472 (496)
. ............+... ...+.+++.+||+.+|++|||+.++++++
T Consensus 228 ---~-~~~~~~~~~~~~~~~~-----~~~~~~li~~cl~~~p~~Rps~~~il~~L 273 (274)
T cd05076 228 ---S-EKERFYEKKHRLPEPS-----CKELATLISQCLTYEPTQRPSFRTILRDL 273 (274)
T ss_pred ---H-HHHHHHHhccCCCCCC-----ChHHHHHHHHHcccChhhCcCHHHHHHhh
Confidence 1 1111112111111110 12477899999999999999999999876
No 314
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=1.2e-37 Score=299.32 Aligned_cols=268 Identities=24% Similarity=0.297 Sum_probs=199.2
Q ss_pred hCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchh-HHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEE
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEE-LAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYE 282 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e 282 (496)
++|++.+.||+|++|+||+|..+ +++.||+|.+..... ....+.+.+|++++++++|+||+++++++..+...++|||
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 81 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE 81 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence 46889999999999999999765 688999999865432 2233567889999999999999999999999999999999
Q ss_pred ecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecC-CCCeEEccccccccccCC
Q 011005 283 YMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNS-KLEAFVADFGTARLLHAD 361 (496)
Q Consensus 283 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~-~~~~kl~Dfg~~~~~~~~ 361 (496)
|++ +++.+.+..... ..+++..+..++.||+.||+||| +++++|+||+|+||+++. ++.+||+|||++......
T Consensus 82 ~~~-~~l~~~~~~~~~-~~~~~~~~~~~~~qi~~aL~~LH---~~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~ 156 (294)
T PLN00009 82 YLD-LDLKKHMDSSPD-FAKNPRLIKTYLYQILRGIAYCH---SHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIP 156 (294)
T ss_pred ccc-ccHHHHHHhCCC-CCcCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCcceEEEECCCCEEEEcccccccccCCC
Confidence 996 578777765432 24678888899999999999999 779999999999999985 567999999999765433
Q ss_pred CCCccccccccccccccccccC-CcCcccchhhHHHHHHHHHhCCCCCccccccCC---------CCCCc-----chhHh
Q 011005 362 SSNRTLLAGTYGYIAPELAYTM-VMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSS---------SSDPK-----IMLID 426 (496)
Q Consensus 362 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~---------~~~~~-----~~~~~ 426 (496)
........+++.|+|||.+.+. .++.++||||+|+++|+|++|+.||........ ..... .....
T Consensus 157 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (294)
T PLN00009 157 VRTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPD 236 (294)
T ss_pred ccccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccchh
Confidence 3333334678899999988664 578899999999999999999999863221000 00000 00000
Q ss_pred hhc--CCCCCCC-ChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhcc
Q 011005 427 VLD--QRLPPPV-DRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRK 477 (496)
Q Consensus 427 ~~~--~~~~~~~-~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~ 477 (496)
... ....... ..........+.+++.+|++.+|++||++.++++|+|+..-
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~~~~~~~ 290 (294)
T PLN00009 237 YKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEHEYFKDL 290 (294)
T ss_pred hhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcCchHhHH
Confidence 000 0000000 00000112346789999999999999999999999998653
No 315
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=3.4e-38 Score=305.86 Aligned_cols=256 Identities=24% Similarity=0.343 Sum_probs=214.6
Q ss_pred HhCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccch-hHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEE
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSE-ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIY 281 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~ 281 (496)
...|.+...||+|.|+.|..|.+. .+..||||.+.+.. +....+.+.+|+++|+.++|||||+++.+......+|+||
T Consensus 55 vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV~ 134 (596)
T KOG0586|consen 55 VGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLVM 134 (596)
T ss_pred ccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEEE
Confidence 467889999999999999999654 69999999998754 3334456899999999999999999999999999999999
Q ss_pred EecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCC
Q 011005 282 EYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHAD 361 (496)
Q Consensus 282 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 361 (496)
||+.+|.+++++.+.. ......+..++.|++.|++||| .+.|+|||||++|+|++.+.++||+|||++..+. .
T Consensus 135 eya~~ge~~~yl~~~g---r~~e~~ar~~F~q~vsaveYcH---~k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~-~ 207 (596)
T KOG0586|consen 135 EYASGGELFDYLVKHG---RMKEKEARAKFRQIVSAVEYCH---SKNIVHRDLKAENILLDENMNIKIADFGFSTFFD-Y 207 (596)
T ss_pred EeccCchhHHHHHhcc---cchhhhhhhhhHHHHHHHHHHh---hcceeccccchhhcccccccceeeeccccceeec-c
Confidence 9999999999999876 4455888899999999999999 7899999999999999999999999999999886 3
Q ss_pred CCCccccccccccccccccccCCcC-cccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcC--CCCCCCCh
Q 011005 362 SSNRTLLAGTYGYIAPELAYTMVMT-EKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQ--RLPPPVDR 438 (496)
Q Consensus 362 ~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 438 (496)
.....+.+|++.|.|||++.+..|. +++|+||+|+++|-|+.|..||+.-.. .......+.. +++.....
T Consensus 208 ~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~l-------k~Lr~rvl~gk~rIp~~ms~ 280 (596)
T KOG0586|consen 208 GLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNL-------KELRPRVLRGKYRIPFYMSC 280 (596)
T ss_pred cccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCccc-------ccccchheeeeecccceeec
Confidence 4456678999999999999998875 699999999999999999999984321 1111122222 23332222
Q ss_pred hHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCCC
Q 011005 439 KVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTPL 480 (496)
Q Consensus 439 ~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~~ 480 (496)
.+.+++.+++..+|.+|++.+++.++.|.-.....
T Consensus 281 -------dce~lLrk~lvl~Pskr~~~dqim~~~W~n~~~~~ 315 (596)
T KOG0586|consen 281 -------DCEDLLRKFLVLNPSKRGPCDQIMKDRWRNDLLEA 315 (596)
T ss_pred -------hhHHHHHHhhccCccccCCHHHhhhhcccchhhhh
Confidence 35578889999999999999999999998766554
No 316
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1e-38 Score=297.49 Aligned_cols=260 Identities=24% Similarity=0.296 Sum_probs=208.7
Q ss_pred HhCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccch--hHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEE
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLI 280 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV 280 (496)
.+.|...+.||+|+||.||-++.+ +|+-||.|++.+.. ......-..+|-.++++++.+.||.+-.+|+.++.+++|
T Consensus 184 ~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClV 263 (591)
T KOG0986|consen 184 KNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLV 263 (591)
T ss_pred ccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEE
Confidence 356888899999999999999654 69999999886543 222334568999999999999999999999999999999
Q ss_pred EEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccC
Q 011005 281 YEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHA 360 (496)
Q Consensus 281 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 360 (496)
+..|.||+|.-++...+. ..|++..++-++.+|+.||++|| ..+||+||+||+|||+|+.|+++|+|+|+|..+..
T Consensus 264 LtlMNGGDLkfHiyn~g~-~gF~e~ra~FYAAEi~cGLehlH---~~~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~ 339 (591)
T KOG0986|consen 264 LTLMNGGDLKFHIYNHGN-PGFDEQRARFYAAEIICGLEHLH---RRRIVYRDLKPENILLDDHGHVRISDLGLAVEIPE 339 (591)
T ss_pred EEeecCCceeEEeeccCC-CCCchHHHHHHHHHHHhhHHHHH---hcceeeccCChhheeeccCCCeEeeccceEEecCC
Confidence 999999999999887654 47999999999999999999999 77999999999999999999999999999998854
Q ss_pred CCCCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhH
Q 011005 361 DSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKV 440 (496)
Q Consensus 361 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 440 (496)
.. .....+||.+|||||++.+..|+...|.||+||++|||+.|+.||.... +....+.++.+.........
T Consensus 340 g~-~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~K--------eKvk~eEvdrr~~~~~~ey~ 410 (591)
T KOG0986|consen 340 GK-PIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRK--------EKVKREEVDRRTLEDPEEYS 410 (591)
T ss_pred CC-ccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhh--------hhhhHHHHHHHHhcchhhcc
Confidence 33 3344589999999999999999999999999999999999999997322 11222222222222211111
Q ss_pred HHHHHHHHHHHHhcccCCCCCCC-----CHHHHHHHHHHhc
Q 011005 441 IRDILLISTVSFACLQSNPKSRP-----TMQSVSQEFLITR 476 (496)
Q Consensus 441 ~~~~~~l~~li~~cl~~dP~~Rp-----s~~evl~~~~~~~ 476 (496)
..-......+....|..||++|. .++++-+|+++..
T Consensus 411 ~kFS~eakslc~~LL~Kdp~~RLGcrg~ga~evk~HpfFk~ 451 (591)
T KOG0986|consen 411 DKFSEEAKSLCEGLLTKDPEKRLGCRGEGAQEVKEHPFFKD 451 (591)
T ss_pred cccCHHHHHHHHHHHccCHHHhccCCCcCcchhhhCccccc
Confidence 12222356777789999999987 4668888877754
No 317
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=2.9e-37 Score=290.71 Aligned_cols=254 Identities=29% Similarity=0.431 Sum_probs=207.5
Q ss_pred CCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchh-HHHHHHHHHHHHHHHhhcccccccccceeecC--CeEEEEE
Q 011005 206 DFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEE-LAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHK--KCMFLIY 281 (496)
Q Consensus 206 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~lV~ 281 (496)
+|...+.||+|++|.||+|... +++.|++|.+..... ....+.+.+|++++++++|+||+++++.+... ...++|+
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 80 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFL 80 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEE
Confidence 4777889999999999999775 789999999876542 23457789999999999999999999999988 8899999
Q ss_pred EecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCC
Q 011005 282 EYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHAD 361 (496)
Q Consensus 282 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 361 (496)
||+++++|.+++.... .+++..+..++.|++.|++||| +.+++|+||+|+||+++.++.++|+|||.+......
T Consensus 81 e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~l~~~l~~lh---~~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~ 154 (260)
T cd06606 81 EYVSGGSLSSLLKKFG---KLPEPVIRKYTRQILEGLAYLH---SNGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDI 154 (260)
T ss_pred EecCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEcCCCCEEEcccccEEecccc
Confidence 9999999999998654 7899999999999999999999 789999999999999999999999999999877554
Q ss_pred CC--CccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChh
Q 011005 362 SS--NRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRK 439 (496)
Q Consensus 362 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 439 (496)
.. ......++..|+|||.+.+..++.++||||+|+++|+|++|..||.... ....................
T Consensus 155 ~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~------~~~~~~~~~~~~~~~~~~~~- 227 (260)
T cd06606 155 ETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELG------NPMAALYKIGSSGEPPEIPE- 227 (260)
T ss_pred cccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC------chHHHHHhccccCCCcCCCc-
Confidence 32 1334568889999999998889999999999999999999999987432 01111111111111111111
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHH
Q 011005 440 VIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLI 474 (496)
Q Consensus 440 ~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~ 474 (496)
.....+.+++.+|++.||++||++.|+++|+|+
T Consensus 228 --~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 260 (260)
T cd06606 228 --HLSEEAKDFLRKCLRRDPKKRPTADELLQHPFL 260 (260)
T ss_pred --ccCHHHHHHHHHhCcCChhhCCCHHHHhhCCCC
Confidence 113457899999999999999999999999884
No 318
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=2.3e-37 Score=291.19 Aligned_cols=255 Identities=27% Similarity=0.435 Sum_probs=207.9
Q ss_pred CCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchh-HHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEe
Q 011005 206 DFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEE-LAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEY 283 (496)
Q Consensus 206 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~ 283 (496)
+|.+.+.||.|+||.||++... +++.+++|.+..... ....+.+.+|+++++.++|+|++++++.+..+...++|+||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~ 80 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEY 80 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEe
Confidence 4788899999999999999764 688999999876432 24456788999999999999999999999999999999999
Q ss_pred cCCCChhhhhhCCC-CCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCC
Q 011005 284 MERGSLFCNLHNNE-DAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADS 362 (496)
Q Consensus 284 ~~~g~L~~~l~~~~-~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 362 (496)
+++++|.+.+.... ....+++..+..++.+++.||.||| +.+++|+||+|+||+++.++.++|+|||.+.......
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh---~~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~ 157 (258)
T cd08215 81 ADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLH---SRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTV 157 (258)
T ss_pred cCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHH---hCCEecccCChHHeEEcCCCcEEECCccceeecccCc
Confidence 99999999987642 1247899999999999999999999 7799999999999999999999999999998765443
Q ss_pred CCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHHH
Q 011005 363 SNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVIR 442 (496)
Q Consensus 363 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (496)
.......+++.|+|||...+..++.++|+||+|+++|+|++|+.||.... ............... ... .
T Consensus 158 ~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~-------~~~~~~~~~~~~~~~-~~~---~ 226 (258)
T cd08215 158 DLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGEN-------LLELALKILKGQYPP-IPS---Q 226 (258)
T ss_pred ceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCc-------HHHHHHHHhcCCCCC-CCC---C
Confidence 33344568889999999999899999999999999999999999986321 111222222222211 111 1
Q ss_pred HHHHHHHHHHhcccCCCCCCCCHHHHHHHHHH
Q 011005 443 DILLISTVSFACLQSNPKSRPTMQSVSQEFLI 474 (496)
Q Consensus 443 ~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~ 474 (496)
....+.+++.+||..+|++|||+.|+++++|+
T Consensus 227 ~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 258 (258)
T cd08215 227 YSSELRNLVSSLLQKDPEERPSIAQILQSPFI 258 (258)
T ss_pred CCHHHHHHHHHHcCCChhhCcCHHHHhcCCCC
Confidence 12347789999999999999999999999874
No 319
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=1.5e-37 Score=293.68 Aligned_cols=248 Identities=27% Similarity=0.403 Sum_probs=201.2
Q ss_pred eeecCCeeEEEEEeC-CCcEEEEEEcccchh--HHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEecCCCCh
Q 011005 213 IGTGGYGSVYKAQLP-NGKVFALKKLHTSEE--LAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEYMERGSL 289 (496)
Q Consensus 213 lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~~~~g~L 289 (496)
||.|+||.||+|... +++.+++|.+..... ....+.+.+|+.++++++|+||+++++.+..+...++|+||+++++|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 689999999999876 489999999865432 23456788999999999999999999999999999999999999999
Q ss_pred hhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCC------
Q 011005 290 FCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSS------ 363 (496)
Q Consensus 290 ~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~------ 363 (496)
.+++.+.. .+++..+..++.||+.||+||| ..+++|+||+|+||++++++.++|+|||++........
T Consensus 81 ~~~l~~~~---~~~~~~~~~i~~qi~~~L~~lH---~~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~ 154 (265)
T cd05579 81 ASLLENVG---SLDEDVARIYIAEIVLALEYLH---SNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDD 154 (265)
T ss_pred HHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---HcCeecCCCCHHHeEEcCCCCEEEEecccchhcccCcccccccc
Confidence 99998644 6899999999999999999999 78999999999999999999999999999876543321
Q ss_pred --CccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHH
Q 011005 364 --NRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVI 441 (496)
Q Consensus 364 --~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (496)
......++..|+|||...+..++.++||||||+++|++++|+.||.... ...............+...
T Consensus 155 ~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~-------~~~~~~~~~~~~~~~~~~~--- 224 (265)
T cd05579 155 EKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGET-------PEEIFQNILNGKIEWPEDV--- 224 (265)
T ss_pred cccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCC-------HHHHHHHHhcCCcCCCccc---
Confidence 2233457889999999998889999999999999999999999986322 1222222222222221111
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCH---HHHHHHHHHhc
Q 011005 442 RDILLISTVSFACLQSNPKSRPTM---QSVSQEFLITR 476 (496)
Q Consensus 442 ~~~~~l~~li~~cl~~dP~~Rps~---~evl~~~~~~~ 476 (496)
.....+.+++.+||+.+|++|||+ .++++|+|+..
T Consensus 225 ~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~~~~~~~ 262 (265)
T cd05579 225 EVSDEAIDLISKLLVPDPEKRLGAKSIEEIKNHPFFKG 262 (265)
T ss_pred cCCHHHHHHHHHHhcCCHhhcCCCccHHHHhcCccccC
Confidence 013457799999999999999999 99999998853
No 320
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=2.8e-37 Score=292.66 Aligned_cols=249 Identities=21% Similarity=0.294 Sum_probs=184.6
Q ss_pred eeeecCCeeEEEEEeCCC---cEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEecCCCC
Q 011005 212 CIGTGGYGSVYKAQLPNG---KVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEYMERGS 288 (496)
Q Consensus 212 ~lg~G~~g~Vy~~~~~~~---~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~~~~g~ 288 (496)
.||+|+||.||+|...++ ..+++|.+.........+.+.+|+.+++.++||||+++++.+......++||||+++|+
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 81 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELGD 81 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCCc
Confidence 589999999999965433 34667776654434445788999999999999999999999999999999999999999
Q ss_pred hhhhhhCCCC-CccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCC--CCc
Q 011005 289 LFCNLHNNED-AVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADS--SNR 365 (496)
Q Consensus 289 L~~~l~~~~~-~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~--~~~ 365 (496)
|.+++..... ....+...+..++.||+.||+||| +.+++||||||+||+++.++.++|+|||++....... ...
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH---~~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~ 158 (268)
T cd05086 82 LKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMH---KHNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIETE 158 (268)
T ss_pred HHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHH---HCCeeccCCccceEEEcCCccEEecccccccccCcchhhhcc
Confidence 9999976432 234667778899999999999999 7799999999999999999999999999986432211 112
Q ss_pred ccccccccccccccccc-------CCcCcccchhhHHHHHHHHHh-CCCCCccccccCCCCCCcchhHhhhcCC---CCC
Q 011005 366 TLLAGTYGYIAPELAYT-------MVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSSDPKIMLIDVLDQR---LPP 434 (496)
Q Consensus 366 ~~~~gt~~y~aPE~~~~-------~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 434 (496)
....++..|+|||++.. ..++.++||||||+++|||++ |..||..... ........... +..
T Consensus 159 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~-------~~~~~~~~~~~~~~~~~ 231 (268)
T cd05086 159 DDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSD-------REVLNHVIKDQQVKLFK 231 (268)
T ss_pred cCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCH-------HHHHHHHHhhcccccCC
Confidence 33567889999998753 245779999999999999997 5667753211 11111111111 111
Q ss_pred CCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHH
Q 011005 435 PVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFL 473 (496)
Q Consensus 435 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~ 473 (496)
+.... .....+.+++..|| .+|++||+++|+++.+.
T Consensus 232 ~~~~~--~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 232 PQLEL--PYSERWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred CccCC--CCcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 10000 01224567888899 67999999999988763
No 321
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=2.4e-37 Score=300.48 Aligned_cols=265 Identities=25% Similarity=0.355 Sum_probs=197.4
Q ss_pred CCCCcceeeecCCeeEEEEEeC---CCcEEEEEEcccch--hHHHHHHHHHHHHHHHhhcccccccccceeecC--CeEE
Q 011005 206 DFDIRYCIGTGGYGSVYKAQLP---NGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHK--KCMF 278 (496)
Q Consensus 206 ~~~~~~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~ 278 (496)
+|.+.+.||+|+||.||+|..+ +++.||+|.+.... .......+.+|+.++++++||||+++++++... ...+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY 80 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence 4788899999999999999765 47899999987632 112235678899999999999999999999988 7899
Q ss_pred EEEEecCCCChhhhhhCCCC--CccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecC----CCCeEEccc
Q 011005 279 LIYEYMERGSLFCNLHNNED--AVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNS----KLEAFVADF 352 (496)
Q Consensus 279 lV~e~~~~g~L~~~l~~~~~--~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~----~~~~kl~Df 352 (496)
+||||+++ ++.+.+..... ...++...++.++.|++.||+||| +.+++||||||+||+++. ++.+||+||
T Consensus 81 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Df 156 (316)
T cd07842 81 LLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLH---SNWVLHRDLKPANILVMGEGPERGVVKIGDL 156 (316)
T ss_pred EEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHH---hCCEeeCCCCHHHEEEcCCCCccceEEECCC
Confidence 99999975 66666643221 236889999999999999999999 789999999999999999 899999999
Q ss_pred cccccccCCCC---CccccccccccccccccccC-CcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCC--cchhH-
Q 011005 353 GTARLLHADSS---NRTLLAGTYGYIAPELAYTM-VMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDP--KIMLI- 425 (496)
Q Consensus 353 g~~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~--~~~~~- 425 (496)
|++........ ......+++.|+|||.+.+. .++.++||||||+++|+|++|+.||...........+ .....
T Consensus 157 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (316)
T cd07842 157 GLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLER 236 (316)
T ss_pred ccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHH
Confidence 99987643322 12234678899999987764 5789999999999999999999998643321100000 00000
Q ss_pred --hhh-----------------------cCCCCCCCChhHH------HHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHH
Q 011005 426 --DVL-----------------------DQRLPPPVDRKVI------RDILLISTVSFACLQSNPKSRPTMQSVSQEFLI 474 (496)
Q Consensus 426 --~~~-----------------------~~~~~~~~~~~~~------~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~ 474 (496)
+.+ ......+...... .....+.+++.+||++||++|||+.|+++|+|+
T Consensus 237 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~~~f 316 (316)
T cd07842 237 IFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEHPYF 316 (316)
T ss_pred HHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhcCCCC
Confidence 000 0000000000000 112357889999999999999999999999885
No 322
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=1.5e-37 Score=303.88 Aligned_cols=268 Identities=24% Similarity=0.284 Sum_probs=206.0
Q ss_pred CCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchh-HHHHHHHHHHHHHHHhhcccccccccceeecCC-----eEE
Q 011005 206 DFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEE-LAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKK-----CMF 278 (496)
Q Consensus 206 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-----~~~ 278 (496)
+|++.+.||+|++|.||+|... +++.||+|++..... ....+.+.+|+.+++.++|+||+++++++.... ..+
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY 80 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence 5888999999999999999765 589999999876432 334567889999999999999999999998775 789
Q ss_pred EEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccc
Q 011005 279 LIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLL 358 (496)
Q Consensus 279 lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 358 (496)
+||||+. ++|.+.+.... .+++..+..++.|++.||+||| +.|++||||||+||+++.++.++|+|||++...
T Consensus 81 lv~e~~~-~~l~~~l~~~~---~l~~~~~~~i~~~l~~~l~~LH---~~gi~H~dlkp~nili~~~~~~~L~dfg~~~~~ 153 (330)
T cd07834 81 IVTELME-TDLHKVIKSPQ---PLTDDHIQYFLYQILRGLKYLH---SANVIHRDLKPSNILVNSNCDLKICDFGLARGV 153 (330)
T ss_pred EEecchh-hhHHHHHhCCC---CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEcccCceEee
Confidence 9999997 48888887544 7899999999999999999999 789999999999999999999999999999877
Q ss_pred cCCCC---CccccccccccccccccccC-CcCcccchhhHHHHHHHHHhCCCCCccccccC---------CCCC------
Q 011005 359 HADSS---NRTLLAGTYGYIAPELAYTM-VMTEKCDVYSFGVVTLEVLMGKHPRDILSSLS---------SSSD------ 419 (496)
Q Consensus 359 ~~~~~---~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~el~~g~~p~~~~~~~~---------~~~~------ 419 (496)
..... ......+++.|+|||.+.+. .++.++|+||+|+++|+|++|+.||....... ....
T Consensus 154 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 233 (330)
T cd07834 154 DPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKF 233 (330)
T ss_pred cccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhh
Confidence 54431 22334578899999999888 78999999999999999999999996432100 0000
Q ss_pred -CcchhHhhhcCCCC---CCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCCC
Q 011005 420 -PKIMLIDVLDQRLP---PPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTPL 480 (496)
Q Consensus 420 -~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~~ 480 (496)
......+....... .............+.+++.+||+++|++|||++++++|+|+.+....
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~~ 298 (330)
T cd07834 234 ITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLHDP 298 (330)
T ss_pred ccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhccc
Confidence 00000000000000 00000000122357789999999999999999999999999765544
No 323
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=3.8e-37 Score=289.42 Aligned_cols=245 Identities=24% Similarity=0.436 Sum_probs=195.6
Q ss_pred hCCCCcceeeecCCeeEEEEEeCCCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEec
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEYM 284 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~~ 284 (496)
++|++.+.||+|+||.||+|.. +++.||+|.+..... ...+.+|+.++++++|||++++++++.... .++||||+
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~~---~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~-~~~v~e~~ 80 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDVT---AQAFLEETAVMTKLHHKNLVRLLGVILHNG-LYIVMELM 80 (254)
T ss_pred HHceeeeeeccCCCCceEeccc-CCCceEEEeecCcch---HHHHHHHHHHHHhCCCCCcCeEEEEEcCCC-cEEEEECC
Confidence 5688999999999999999975 678899999865432 256789999999999999999999987654 78999999
Q ss_pred CCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCCC
Q 011005 285 ERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSN 364 (496)
Q Consensus 285 ~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 364 (496)
++++|.+++.... ...+++..++.++.|++.|+.||| +.+++||||||+||+++.++.++|+|||++......
T Consensus 81 ~~~~L~~~l~~~~-~~~~~~~~~~~~~~qi~~al~~lH---~~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~--- 153 (254)
T cd05083 81 SKGNLVNFLRTRG-RALVSVIQLLQFSLDVAEGMEYLE---SKKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMG--- 153 (254)
T ss_pred CCCCHHHHHHhcC-cCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccccCcceEEEcCCCcEEECCCccceecccc---
Confidence 9999999997643 235789999999999999999999 789999999999999999999999999998754322
Q ss_pred ccccccccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHHHH
Q 011005 365 RTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVIRD 443 (496)
Q Consensus 365 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 443 (496)
......+..|+|||.+.+..++.++|+||+|+++|+|++ |+.||..... .. ............... ..
T Consensus 154 ~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~-------~~-~~~~~~~~~~~~~~~---~~ 222 (254)
T cd05083 154 VDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSL-------KE-VKECVEKGYRMEPPE---GC 222 (254)
T ss_pred CCCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCH-------HH-HHHHHhCCCCCCCCC---cC
Confidence 112234568999999998899999999999999999997 9999863221 11 111121211111111 12
Q ss_pred HHHHHHHHHhcccCCCCCCCCHHHHHHHH
Q 011005 444 ILLISTVSFACLQSNPKSRPTMQSVSQEF 472 (496)
Q Consensus 444 ~~~l~~li~~cl~~dP~~Rps~~evl~~~ 472 (496)
+..+.+++.+||+.+|++||+++++++.+
T Consensus 223 ~~~~~~li~~~l~~~p~~Rp~~~~l~~~l 251 (254)
T cd05083 223 PADVYVLMTSCWETEPKKRPSFHKLREKL 251 (254)
T ss_pred CHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence 23577999999999999999999999875
No 324
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=2.3e-37 Score=295.83 Aligned_cols=262 Identities=25% Similarity=0.350 Sum_probs=202.9
Q ss_pred hCCCCcceeeecCCeeEEEEEeC-----CCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeec--CCeE
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLP-----NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLH--KKCM 277 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~--~~~~ 277 (496)
.+|++.+.||+|+||.||+|.+. .++.+|+|.+.........+.+.+|+++++.+.|+||+++++++.. +...
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~ 83 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSL 83 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCce
Confidence 46778899999999999999753 4788999999765543345778999999999999999999999877 5578
Q ss_pred EEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEcccccccc
Q 011005 278 FLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARL 357 (496)
Q Consensus 278 ~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 357 (496)
++||||+++++|.+++..... .+++..+..++.|++.||+||| +.+++|+||||+||+++.++.++|+|||.+..
T Consensus 84 ~lv~e~~~~~~l~~~l~~~~~--~~~~~~~~~~~~~l~~aL~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~ 158 (284)
T cd05038 84 RLIMEYLPSGSLRDYLQRHRD--QINLKRLLLFSSQICKGMDYLG---SQRYIHRDLAARNILVESEDLVKISDFGLAKV 158 (284)
T ss_pred EEEEecCCCCCHHHHHHhCcc--ccCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHhEEEcCCCCEEEcccccccc
Confidence 999999999999999986532 5899999999999999999999 78999999999999999999999999999987
Q ss_pred ccCCCCCc---cccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCC----C---CCcchhHhh
Q 011005 358 LHADSSNR---TLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSS----S---DPKIMLIDV 427 (496)
Q Consensus 358 ~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~----~---~~~~~~~~~ 427 (496)
........ ....++..|+|||.+.+..++.++||||||+++|||++|+.|+......... . .......+.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (284)
T cd05038 159 LPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLEL 238 (284)
T ss_pred cccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHHH
Confidence 65332211 1123455799999999889999999999999999999999997532111000 0 001111122
Q ss_pred hcCCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHH
Q 011005 428 LDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLI 474 (496)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~ 474 (496)
+......+... .....+.+++.+||+.+|++|||+.|+++.+..
T Consensus 239 ~~~~~~~~~~~---~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~ 282 (284)
T cd05038 239 LKEGERLPRPP---SCPDEVYDLMKLCWEAEPQDRPSFADLILIVDR 282 (284)
T ss_pred HHcCCcCCCCc---cCCHHHHHHHHHHhccChhhCCCHHHHHHHHhh
Confidence 22211111111 112457899999999999999999999998754
No 325
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=1.4e-37 Score=304.49 Aligned_cols=268 Identities=22% Similarity=0.246 Sum_probs=201.4
Q ss_pred HhCCCCcceeeecCCeeEEEEEe-CCCcEEEEEEcccch-hHHHHHHHHHHHHHHHhhcccccccccceeecC-----Ce
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSE-ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHK-----KC 276 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~-----~~ 276 (496)
.++|.+.+.||+|+||+||+|.. .+++.||+|.+.... .......+.+|+.+++.++|+||+++++++... ..
T Consensus 4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 83 (337)
T cd07858 4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND 83 (337)
T ss_pred ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence 46799999999999999999965 468999999987532 222335667899999999999999999988654 34
Q ss_pred EEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccc
Q 011005 277 MFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTAR 356 (496)
Q Consensus 277 ~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~ 356 (496)
.++|+||+. ++|.+++.... .+++..+..++.|++.||.||| +.+++||||||+||+++.++.++|+|||++.
T Consensus 84 ~~lv~e~~~-~~L~~~~~~~~---~l~~~~~~~i~~qi~~aL~~LH---~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~ 156 (337)
T cd07858 84 VYIVYELMD-TDLHQIIRSSQ---TLSDDHCQYFLYQLLRGLKYIH---SANVLHRDLKPSNLLLNANCDLKICDFGLAR 156 (337)
T ss_pred EEEEEeCCC-CCHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCEEECcCcccc
Confidence 799999996 68888887543 6899999999999999999999 7899999999999999999999999999998
Q ss_pred cccCCCCCcccccccccccccccccc-CCcCcccchhhHHHHHHHHHhCCCCCcccccc----------CCCCC------
Q 011005 357 LLHADSSNRTLLAGTYGYIAPELAYT-MVMTEKCDVYSFGVVTLEVLMGKHPRDILSSL----------SSSSD------ 419 (496)
Q Consensus 357 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~el~~g~~p~~~~~~~----------~~~~~------ 419 (496)
.............++..|+|||.+.+ ..++.++||||||+++|+|++|+.||...... .....
T Consensus 157 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (337)
T cd07858 157 TTSEKGDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFI 236 (337)
T ss_pred ccCCCcccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhc
Confidence 76443322334567889999998765 46889999999999999999999998632110 00000
Q ss_pred CcchhHhhhcCC---CCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccC
Q 011005 420 PKIMLIDVLDQR---LPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKT 478 (496)
Q Consensus 420 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~ 478 (496)
............ ...............+.+++.+||+.||++|||++|+++|+|+..-.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~~ 298 (337)
T cd07858 237 RNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASLH 298 (337)
T ss_pred CchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhhc
Confidence 000000000000 00000000011233577999999999999999999999999996543
No 326
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3e-38 Score=304.02 Aligned_cols=263 Identities=25% Similarity=0.391 Sum_probs=212.8
Q ss_pred HHHHHHHhCCCCcceeeecCCeeEEEEEeCC-CcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCe
Q 011005 198 EDLIEATEDFDIRYCIGTGGYGSVYKAQLPN-GKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKC 276 (496)
Q Consensus 198 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 276 (496)
++++--..+.++.++||-|.||.||.|.|+. .-.||||.++.+. ....+|..|+.+|+.++|||+|+++|+|.....
T Consensus 260 DkWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDt--MeveEFLkEAAvMKeikHpNLVqLLGVCT~EpP 337 (1157)
T KOG4278|consen 260 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT--MEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPP 337 (1157)
T ss_pred chhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhcc--hhHHHHHHHHHHHHhhcCccHHHHhhhhccCCC
Confidence 3333344567788999999999999998864 5679999998754 345889999999999999999999999999999
Q ss_pred EEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccc
Q 011005 277 MFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTAR 356 (496)
Q Consensus 277 ~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~ 356 (496)
.|||+|||..|+|.++|...... .++.-..+.++.||..|++||. ++.+|||||.++|+|+.++..||++|||+++
T Consensus 338 FYIiTEfM~yGNLLdYLRecnr~-ev~avvLlyMAtQIsSaMeYLE---kknFIHRDLAARNCLVgEnhiVKvADFGLsR 413 (1157)
T KOG4278|consen 338 FYIITEFMCYGNLLDYLRECNRS-EVPAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHIVKVADFGLSR 413 (1157)
T ss_pred eEEEEecccCccHHHHHHHhchh-hcchhHHHHHHHHHHHHHHHHH---HhhhhhhhhhhhhccccccceEEeeccchhh
Confidence 99999999999999999876533 5677777899999999999999 8899999999999999999999999999999
Q ss_pred cccCCCCCccc-cccccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccCCCCCCcchhHhhhcCCCCC
Q 011005 357 LLHADSSNRTL-LAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSSDPKIMLIDVLDQRLPP 434 (496)
Q Consensus 357 ~~~~~~~~~~~-~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (496)
.+..+...... ..-...|.|||.+.-..++.++|||+|||+|||+.| |-.||.... -....+.+.+....
T Consensus 414 lMtgDTYTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGid--------lSqVY~LLEkgyRM 485 (1157)
T KOG4278|consen 414 LMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGID--------LSQVYGLLEKGYRM 485 (1157)
T ss_pred hhcCCceecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCcc--------HHHHHHHHhccccc
Confidence 99766543221 223568999999999999999999999999999998 777875322 11223333333332
Q ss_pred CCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhcc
Q 011005 435 PVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRK 477 (496)
Q Consensus 435 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~ 477 (496)
.... .++....+|+..||++.|.+||++.|+-+.+...-.
T Consensus 486 ~~Pe---GCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtmf~ 525 (1157)
T KOG4278|consen 486 DGPE---GCPPKVYELMRACWNWSPSDRPSFAEIHQAFETMFS 525 (1157)
T ss_pred cCCC---CCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHHhc
Confidence 2222 234467899999999999999999999877765433
No 327
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=2.8e-37 Score=294.33 Aligned_cols=249 Identities=22% Similarity=0.251 Sum_probs=190.9
Q ss_pred eeeecCCeeEEEEEeC-CCcEEEEEEcccchh--HHHHHHHHHHHHHHHhh---cccccccccceeecCCeEEEEEEecC
Q 011005 212 CIGTGGYGSVYKAQLP-NGKVFALKKLHTSEE--LAFIKSFKNEAQVLSQV---LHRNIVKLYGYCLHKKCMFLIYEYME 285 (496)
Q Consensus 212 ~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l---~h~niv~~~~~~~~~~~~~lV~e~~~ 285 (496)
.||+|+||.||++... +++.+|+|.+..... ......+.+|..+++.+ +|+||+.+++++...+..++||||++
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 3899999999999764 688999998865321 11122334454444443 69999999999999999999999999
Q ss_pred CCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCCCc
Q 011005 286 RGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNR 365 (496)
Q Consensus 286 ~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 365 (496)
+|+|.+++.... .+++..+..++.|++.||+||| +.+++||||||+||++++++.++|+|||++...... ..
T Consensus 81 ~~~L~~~i~~~~---~l~~~~~~~i~~qi~~al~~lH---~~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~--~~ 152 (279)
T cd05633 81 GGDLHYHLSQHG---VFSEKEMRFYATEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK--KP 152 (279)
T ss_pred CCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---HCCcCCCCCCHHHEEECCCCCEEEccCCcceecccc--Cc
Confidence 999998887544 6899999999999999999999 789999999999999999999999999998755332 22
Q ss_pred cccccccccccccccc-cCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHHHHH
Q 011005 366 TLLAGTYGYIAPELAY-TMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVIRDI 444 (496)
Q Consensus 366 ~~~~gt~~y~aPE~~~-~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (496)
....|++.|+|||.+. +..++.++||||+|+++|+|++|+.||..... . ........ ......... ....
T Consensus 153 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~----~-~~~~~~~~-~~~~~~~~~---~~~~ 223 (279)
T cd05633 153 HASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKT----K-DKHEIDRM-TLTVNVELP---DSFS 223 (279)
T ss_pred cCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCC----c-CHHHHHHH-hhcCCcCCc---cccC
Confidence 3346899999999886 45688999999999999999999999964321 0 11111111 111111111 1122
Q ss_pred HHHHHHHHhcccCCCCCCC-----CHHHHHHHHHHhcc
Q 011005 445 LLISTVSFACLQSNPKSRP-----TMQSVSQEFLITRK 477 (496)
Q Consensus 445 ~~l~~li~~cl~~dP~~Rp-----s~~evl~~~~~~~~ 477 (496)
..+.+++.+||+.||++|| |++|+++|+|+...
T Consensus 224 ~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h~~~~~~ 261 (279)
T cd05633 224 PELKSLLEGLLQRDVSKRLGCLGRGAQEVKEHVFFKGI 261 (279)
T ss_pred HHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhCccccCC
Confidence 3577899999999999999 69999999999764
No 328
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=3.3e-37 Score=291.85 Aligned_cols=254 Identities=24% Similarity=0.334 Sum_probs=196.5
Q ss_pred HHHHHHHhCCCCccee--eecCCeeEEEEEe-CCCcEEEEEEcccchhHHHHHHHHHHHHHHHhh-cccccccccceeec
Q 011005 198 EDLIEATEDFDIRYCI--GTGGYGSVYKAQL-PNGKVFALKKLHTSEELAFIKSFKNEAQVLSQV-LHRNIVKLYGYCLH 273 (496)
Q Consensus 198 ~~~~~~~~~~~~~~~l--g~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~ 273 (496)
.+.....++|++.+.+ |+|+||.||++.. .++..+|+|.+....... .|+.....+ +|+||+++++++..
T Consensus 7 ~~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~------~e~~~~~~~~~h~~iv~~~~~~~~ 80 (267)
T PHA03390 7 SELVQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA------IEPMVHQLMKDNPNFIKLYYSVTT 80 (267)
T ss_pred HHHHHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch------hhHHHHHHhhcCCCEEEEEEEEec
Confidence 4455556788887776 9999999999975 468889999886542111 122222223 69999999999999
Q ss_pred CCeEEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCC-CeEEccc
Q 011005 274 KKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKL-EAFVADF 352 (496)
Q Consensus 274 ~~~~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~-~~kl~Df 352 (496)
.+..++||||+++++|.+++.... .+++.++..++.|+++||.||| +.+++||||+|+||+++.++ .++|+||
T Consensus 81 ~~~~~iv~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~~~l~df 154 (267)
T PHA03390 81 LKGHVLIMDYIKDGDLFDLLKKEG---KLSEAEVKKIIRQLVEALNDLH---KHNIIHNDIKLENVLYDRAKDRIYLCDY 154 (267)
T ss_pred CCeeEEEEEcCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEEeCCCCeEEEecC
Confidence 999999999999999999997654 7899999999999999999999 78999999999999999998 9999999
Q ss_pred cccccccCCCCCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCC
Q 011005 353 GTARLLHADSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRL 432 (496)
Q Consensus 353 g~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (496)
|++...... ....++..|+|||++.+..++.++||||+|+++|+|++|+.||..... ........... .
T Consensus 155 g~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~------~~~~~~~~~~~-~ 223 (267)
T PHA03390 155 GLCKIIGTP----SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDED------EELDLESLLKR-Q 223 (267)
T ss_pred ccceecCCC----ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCc------chhhHHHHHHh-h
Confidence 998765322 234578899999999999999999999999999999999999963211 11111111111 1
Q ss_pred CCCCChhHHHHHHHHHHHHHhcccCCCCCCCC-HHHHHHHHHHh
Q 011005 433 PPPVDRKVIRDILLISTVSFACLQSNPKSRPT-MQSVSQEFLIT 475 (496)
Q Consensus 433 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps-~~evl~~~~~~ 475 (496)
..... ........+.+++.+||+.+|.+||+ ++|+++|+|+.
T Consensus 224 ~~~~~-~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~h~~~~ 266 (267)
T PHA03390 224 QKKLP-FIKNVSKNANDFVQSMLKYNINYRLTNYNEIIKHPFLK 266 (267)
T ss_pred cccCC-cccccCHHHHHHHHHHhccChhhCCchHHHHhcCCccc
Confidence 11110 01122335789999999999999996 69999999975
No 329
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=1.9e-37 Score=296.05 Aligned_cols=260 Identities=22% Similarity=0.258 Sum_probs=194.1
Q ss_pred CCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchhHHHHHHHHHHHHHHHhhc-ccccccccceeecC--CeEEEEEE
Q 011005 207 FDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVL-HRNIVKLYGYCLHK--KCMFLIYE 282 (496)
Q Consensus 207 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~--~~~~lV~e 282 (496)
|++.+.||+|+||.||+|..+ +++.||+|.++............+|+.+++++. |+|++++++++.++ +..++|||
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e 80 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE 80 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence 567888999999999999754 688999999876432222234457888999885 99999999999887 88999999
Q ss_pred ecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCC
Q 011005 283 YMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADS 362 (496)
Q Consensus 283 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 362 (496)
|++ |++.+.+.... ..+++.++..++.|++.||.||| ..+++||||+|+||+++. +.++|+|||++.......
T Consensus 81 ~~~-~~l~~~l~~~~--~~~~~~~~~~~~~qi~~~L~~LH---~~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~ 153 (282)
T cd07831 81 LMD-MNLYELIKGRK--RPLPEKRVKSYMYQLLKSLDHMH---RNGIFHRDIKPENILIKD-DILKLADFGSCRGIYSKP 153 (282)
T ss_pred cCC-ccHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHH---HCCceecccCHHHEEEcC-CCeEEEecccccccccCC
Confidence 997 47877776533 26899999999999999999999 779999999999999999 999999999998764332
Q ss_pred CCccccccccccccccccc-cCCcCcccchhhHHHHHHHHHhCCCCCccccccCC-------CCCCcchhHhhhcC----
Q 011005 363 SNRTLLAGTYGYIAPELAY-TMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSS-------SSDPKIMLIDVLDQ---- 430 (496)
Q Consensus 363 ~~~~~~~gt~~y~aPE~~~-~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~-------~~~~~~~~~~~~~~---- 430 (496)
. .....+++.|+|||.+. +..++.++||||+||++|||++|+.||........ ..............
T Consensus 154 ~-~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (282)
T cd07831 154 P-YTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHM 232 (282)
T ss_pred C-cCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhcccccc
Confidence 2 23345788999999765 45678899999999999999999999964321100 00000000000000
Q ss_pred --CCCCCCC----hhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHH
Q 011005 431 --RLPPPVD----RKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLI 474 (496)
Q Consensus 431 --~~~~~~~----~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~ 474 (496)
..+.... .........+.+++.+||+.+|++||+++++++|+|+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~~~~ 282 (282)
T cd07831 233 NYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRHPYF 282 (282)
T ss_pred cccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhCCCC
Confidence 0000000 0001223568899999999999999999999999885
No 330
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=2.6e-38 Score=326.11 Aligned_cols=258 Identities=27% Similarity=0.420 Sum_probs=199.8
Q ss_pred HHhCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeec--------
Q 011005 203 ATEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLH-------- 273 (496)
Q Consensus 203 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-------- 273 (496)
-..+|+..+.||+||||.|||++.+ +|+.||||++....+........+|+.++++++|||||+++..+.+
T Consensus 477 Y~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~~ 556 (1351)
T KOG1035|consen 477 YLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTVL 556 (1351)
T ss_pred HhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccccc
Confidence 4567888999999999999999876 8999999999877666666788999999999999999998743311
Q ss_pred -----------------------------------------------C--------------------------------
Q 011005 274 -----------------------------------------------K-------------------------------- 274 (496)
Q Consensus 274 -----------------------------------------------~-------------------------------- 274 (496)
.
T Consensus 557 ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~~ 636 (1351)
T KOG1035|consen 557 EIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSDS 636 (1351)
T ss_pred cccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccccccccccccc
Confidence 0
Q ss_pred --------------------------------CeEEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHH
Q 011005 275 --------------------------------KCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLH 322 (496)
Q Consensus 275 --------------------------------~~~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh 322 (496)
-.+||-||||+..++.+++..+.-.. .....++++++|+.||.|+|
T Consensus 637 e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~--~~d~~wrLFreIlEGLaYIH 714 (1351)
T KOG1035|consen 637 EGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNS--QRDEAWRLFREILEGLAYIH 714 (1351)
T ss_pred CCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccch--hhHHHHHHHHHHHHHHHHHH
Confidence 12467788888877777777654211 46778899999999999999
Q ss_pred hCCCCCeEEeCCCCCceEecCCCCeEEcccccccccc------------------CCCCCccccccccccccccccccCC
Q 011005 323 HDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLH------------------ADSSNRTLLAGTYGYIAPELAYTMV 384 (496)
Q Consensus 323 ~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~------------------~~~~~~~~~~gt~~y~aPE~~~~~~ 384 (496)
++|+|||||||.|||++++..|||+|||+|+... ......+..+||..|+|||++.+..
T Consensus 715 ---~~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~ 791 (1351)
T KOG1035|consen 715 ---DQGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTS 791 (1351)
T ss_pred ---hCceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccc
Confidence 7899999999999999999999999999998721 0011234568999999999998765
Q ss_pred ---cCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHHHHHHHHHHHHHhcccCCCCC
Q 011005 385 ---MTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVIRDILLISTVSFACLQSNPKS 461 (496)
Q Consensus 385 ---~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~ 461 (496)
|+.|+|+||+|++++||+ .||+. ..+....+....+..++.+ ..........-..+|.+|+++||.+
T Consensus 792 ~~~Yn~KiDmYSLGIVlFEM~---yPF~T------sMERa~iL~~LR~g~iP~~-~~f~~~~~~~e~slI~~Ll~hdP~k 861 (1351)
T KOG1035|consen 792 SNKYNSKIDMYSLGIVLFEML---YPFGT------SMERASILTNLRKGSIPEP-ADFFDPEHPEEASLIRWLLSHDPSK 861 (1351)
T ss_pred cccccchhhhHHHHHHHHHHh---ccCCc------hHHHHHHHHhcccCCCCCC-cccccccchHHHHHHHHHhcCCCcc
Confidence 999999999999999998 34542 2333334444444555544 1112222233467889999999999
Q ss_pred CCCHHHHHHHHHHh
Q 011005 462 RPTMQSVSQEFLIT 475 (496)
Q Consensus 462 Rps~~evl~~~~~~ 475 (496)
|||+.|+|+.-+.-
T Consensus 862 RPtA~eLL~s~llp 875 (1351)
T KOG1035|consen 862 RPTATELLNSELLP 875 (1351)
T ss_pred CCCHHHHhhccCCC
Confidence 99999999987664
No 331
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=3.6e-38 Score=280.71 Aligned_cols=272 Identities=24% Similarity=0.297 Sum_probs=203.7
Q ss_pred HHhCCCCcceeeecCCeeEEEEEeC---C--CcEEEEEEcccchh-HHHHHHHHHHHHHHHhhcccccccccceeec-CC
Q 011005 203 ATEDFDIRYCIGTGGYGSVYKAQLP---N--GKVFALKKLHTSEE-LAFIKSFKNEAQVLSQVLHRNIVKLYGYCLH-KK 275 (496)
Q Consensus 203 ~~~~~~~~~~lg~G~~g~Vy~~~~~---~--~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-~~ 275 (496)
-...|+.+..||+|.||.||||..+ + .+.+|+|+++...+ ........+|+.+++.++|||++.+..++.. +.
T Consensus 22 ~l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~ 101 (438)
T KOG0666|consen 22 DLFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDK 101 (438)
T ss_pred HHHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCc
Confidence 3467999999999999999999433 2 33799999987532 2344677999999999999999999999877 77
Q ss_pred eEEEEEEecCCCChhhhhhCC--CCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCC----CCeEE
Q 011005 276 CMFLIYEYMERGSLFCNLHNN--EDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSK----LEAFV 349 (496)
Q Consensus 276 ~~~lV~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~----~~~kl 349 (496)
.+++++||.+. +|.++++.. .....++...+.+|++||+.|+.||| +.-|+||||||.||++..+ |.|||
T Consensus 102 ~v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH---~NWvlHRDLKPaNIlvmgdgperG~VKI 177 (438)
T KOG0666|consen 102 KVWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLH---SNWVLHRDLKPANILVMGDGPERGRVKI 177 (438)
T ss_pred eEEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHh---hhheeeccCCcceEEEeccCCccCeeEe
Confidence 89999999987 888887643 23347899999999999999999999 6789999999999999877 89999
Q ss_pred ccccccccccCCCCC---ccccccccccccccccccC-CcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCc----
Q 011005 350 ADFGTARLLHADSSN---RTLLAGTYGYIAPELAYTM-VMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPK---- 421 (496)
Q Consensus 350 ~Dfg~~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~---- 421 (496)
+|||+++.+...-.. ....+-|.+|+|||.+.|. .||.+.||||+|||+.||+|-++-|.....-.....+.
T Consensus 178 aDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQ 257 (438)
T KOG0666|consen 178 ADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQ 257 (438)
T ss_pred ecccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHH
Confidence 999999988654332 3346779999999998876 68999999999999999999877664322110000000
Q ss_pred -chhHhhhcC------------------------CCCCCCC-hhHHH----HHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 011005 422 -IMLIDVLDQ------------------------RLPPPVD-RKVIR----DILLISTVSFACLQSNPKSRPTMQSVSQE 471 (496)
Q Consensus 422 -~~~~~~~~~------------------------~~~~~~~-~~~~~----~~~~l~~li~~cl~~dP~~Rps~~evl~~ 471 (496)
..+.+++.. ......+ ..... ......+|+.++|..||.+|.|+++.++|
T Consensus 258 l~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh 337 (438)
T KOG0666|consen 258 LDRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALEH 337 (438)
T ss_pred HHHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhcc
Confidence 000111100 0000000 00000 01125688999999999999999999999
Q ss_pred HHHhccC
Q 011005 472 FLITRKT 478 (496)
Q Consensus 472 ~~~~~~~ 478 (496)
.+++...
T Consensus 338 ~yF~~d~ 344 (438)
T KOG0666|consen 338 PYFTEDP 344 (438)
T ss_pred cccccCC
Confidence 9998763
No 332
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=100.00 E-value=2.4e-37 Score=294.97 Aligned_cols=252 Identities=27% Similarity=0.400 Sum_probs=205.1
Q ss_pred hCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccch--hHHHHHHHHHHHHHHHhhc-ccccccccceeecCCeEEEE
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVL-HRNIVKLYGYCLHKKCMFLI 280 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lV 280 (496)
++|.+.+.||+|+||.||+|... +++.||+|.+.... .....+.+.+|++++++++ |+||+++++++..++..++|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 80 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV 80 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence 46888999999999999999764 78999999987532 2233467889999999998 99999999999999999999
Q ss_pred EEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccC
Q 011005 281 YEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHA 360 (496)
Q Consensus 281 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 360 (496)
||++++++|.+++.+.. .+++..+..++.|++.||.+|| +.+++|+||+|+||+++.++.++++|||++.....
T Consensus 81 ~e~~~~~~L~~~l~~~~---~l~~~~~~~i~~ql~~~l~~Lh---~~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~ 154 (280)
T cd05581 81 LEYAPNGELLQYIRKYG---SLDEKCTRFYAAEILLALEYLH---SKGIIHRDLKPENILLDKDMHIKITDFGTAKVLDP 154 (280)
T ss_pred EcCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHeEECCCCCEEecCCccccccCC
Confidence 99999999999998654 6899999999999999999999 78999999999999999999999999999987644
Q ss_pred CCC--------------------CccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCC
Q 011005 361 DSS--------------------NRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDP 420 (496)
Q Consensus 361 ~~~--------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~ 420 (496)
... ......++..|+|||...+..++.++||||+|++++++++|+.||.... .
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~-------~ 227 (280)
T cd05581 155 NSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSN-------E 227 (280)
T ss_pred ccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCcc-------H
Confidence 321 1222457789999999998889999999999999999999999986332 1
Q ss_pred cchhHhhhcCCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCH----HHHHHHHHH
Q 011005 421 KIMLIDVLDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTM----QSVSQEFLI 474 (496)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~----~evl~~~~~ 474 (496)
..............+. .....+.+++.+||+.+|.+|||+ +++++|+|+
T Consensus 228 ~~~~~~~~~~~~~~~~-----~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~~~~ 280 (280)
T cd05581 228 YLTFQKILKLEYSFPP-----NFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAHPFF 280 (280)
T ss_pred HHHHHHHHhcCCCCCC-----ccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcCCCC
Confidence 1111122111111111 112347799999999999999999 999999874
No 333
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=4.9e-37 Score=298.04 Aligned_cols=257 Identities=19% Similarity=0.231 Sum_probs=194.7
Q ss_pred cceeeecCCeeEEEEEeCCCcEEEEEEcccc-hhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEecCCCC
Q 011005 210 RYCIGTGGYGSVYKAQLPNGKVFALKKLHTS-EELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEYMERGS 288 (496)
Q Consensus 210 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~~~~g~ 288 (496)
.+.+|.|+++.||++.. +++.||+|++... ......+.+.+|+++++.++|+||+++++++...+..+++|||+++|+
T Consensus 7 ~~~~~~~~~v~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~ 85 (314)
T cd08216 7 GKCFEDLMIVHLAKHKP-TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGS 85 (314)
T ss_pred hHhhcCCceEEEEEecC-CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCC
Confidence 34455555555555554 6899999998764 233455778999999999999999999999999999999999999999
Q ss_pred hhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCCC----
Q 011005 289 LFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSN---- 364 (496)
Q Consensus 289 L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~---- 364 (496)
|.+++..... ..++...+..++.|++.||+||| +.+|+||||||+||+++.++.++|+|||.+.........
T Consensus 86 l~~~l~~~~~-~~~~~~~~~~~~~~l~~~L~~LH---~~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~ 161 (314)
T cd08216 86 CEDLLKTHFP-EGLPELAIAFILKDVLNALDYIH---SKGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVV 161 (314)
T ss_pred HHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCcceEEEecCCceEEecCccceeecccccccccc
Confidence 9999886432 25788999999999999999999 789999999999999999999999999998765332211
Q ss_pred ---cccccccccccccccccc--CCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCC--------
Q 011005 365 ---RTLLAGTYGYIAPELAYT--MVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQR-------- 431 (496)
Q Consensus 365 ---~~~~~gt~~y~aPE~~~~--~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~-------- 431 (496)
.....++..|+|||++.+ ..++.++||||+|+++|||++|+.||....... ...+.....
T Consensus 162 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~-------~~~~~~~~~~~~~~~~~ 234 (314)
T cd08216 162 HDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQ-------MLLEKVRGTVPCLLDKS 234 (314)
T ss_pred ccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHH-------HHHHHHhccCccccccC
Confidence 122346778999999876 357889999999999999999999996432110 000000000
Q ss_pred --------C------------CC-CCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccC
Q 011005 432 --------L------------PP-PVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKT 478 (496)
Q Consensus 432 --------~------------~~-~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~ 478 (496)
. .. ............+.+++.+||+.||++|||++|+++|+|+..-.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p~~~~~~ 302 (314)
T cd08216 235 TYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNHSFFKQCK 302 (314)
T ss_pred chhhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcCchHhhhc
Confidence 0 00 00000111123577899999999999999999999999997543
No 334
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=6.8e-37 Score=289.41 Aligned_cols=252 Identities=23% Similarity=0.325 Sum_probs=199.4
Q ss_pred hCCCCcceeeecCCeeEEEEEe-CCCcEEEEEEcccc----hhHHHHHHHHHHHHHHHhhcccccccccceeecC--CeE
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTS----EELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHK--KCM 277 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~----~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~ 277 (496)
.+|.+.+.||+|+||.||+|.. .+++.||+|.+... ........+.+|++++++++|+||+++++++... ...
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence 4688999999999999999975 46899999987532 1233456788999999999999999999998764 468
Q ss_pred EEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEcccccccc
Q 011005 278 FLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARL 357 (496)
Q Consensus 278 ~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 357 (496)
++|+||+++++|.+++.... .+++..+..++.|++.||.||| +.+++|+||+|+||+++.++.++|+|||+++.
T Consensus 82 ~~v~e~~~~~~L~~~~~~~~---~l~~~~~~~~~~~i~~al~~LH---~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~ 155 (264)
T cd06653 82 SIFVEYMPGGSIKDQLKAYG---ALTENVTRRYTRQILQGVSYLH---SNMIVHRDIKGANILRDSAGNVKLGDFGASKR 155 (264)
T ss_pred EEEEEeCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCEEECccccccc
Confidence 89999999999999987543 5788889999999999999999 77999999999999999999999999999986
Q ss_pred ccCCC---CCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCC
Q 011005 358 LHADS---SNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPP 434 (496)
Q Consensus 358 ~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (496)
..... .......++..|+|||.+.+..++.++|+||||+++|++++|+.||.... ...............
T Consensus 156 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-------~~~~~~~~~~~~~~~ 228 (264)
T cd06653 156 IQTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYE-------AMAAIFKIATQPTKP 228 (264)
T ss_pred cccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccC-------HHHHHHHHHcCCCCC
Confidence 53211 11223458889999999999889999999999999999999999986321 111222222111111
Q ss_pred CCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHH
Q 011005 435 PVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFL 473 (496)
Q Consensus 435 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~ 473 (496)
... ......+.+++.+||. +|.+||++.+++.|+|
T Consensus 229 ~~p---~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~~~~ 263 (264)
T cd06653 229 MLP---DGVSDACRDFLKQIFV-EEKRRPTAEFLLRHPF 263 (264)
T ss_pred CCC---cccCHHHHHHHHHHhc-CcccCccHHHHhcCCC
Confidence 111 1122347789999999 5799999999999876
No 335
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=6.4e-37 Score=298.85 Aligned_cols=258 Identities=21% Similarity=0.290 Sum_probs=196.7
Q ss_pred eeeec--CCeeEEEEEe-CCCcEEEEEEcccch-hHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEecCCC
Q 011005 212 CIGTG--GYGSVYKAQL-PNGKVFALKKLHTSE-ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEYMERG 287 (496)
Q Consensus 212 ~lg~G--~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~~~~g 287 (496)
.||+| +||+||+|.+ ..|+.||+|.+.... .....+.+.+|+.+++.++||||+++++++..++..++|+||+.++
T Consensus 5 ~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~~ 84 (328)
T cd08226 5 EIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAYG 84 (328)
T ss_pred HhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccCC
Confidence 46666 9999999976 479999999987543 2334577889999999999999999999999999999999999999
Q ss_pred ChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCCCc--
Q 011005 288 SLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNR-- 365 (496)
Q Consensus 288 ~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~-- 365 (496)
++.+++..... ..+++..+..++.|++.||+||| +.+++||||||+||+++.++.++++||+.+..........
T Consensus 85 ~l~~~l~~~~~-~~~~~~~~~~~~~qi~~aL~~lH---~~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (328)
T cd08226 85 SANSLLKTYFP-EGMSEALIGNILFGALRGLNYLH---QNGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKV 160 (328)
T ss_pred CHHHHHHhhcc-cCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCccccc
Confidence 99998876432 25888999999999999999999 7899999999999999999999999998664432211111
Q ss_pred -----cccccccccccccccccC--CcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcC--------
Q 011005 366 -----TLLAGTYGYIAPELAYTM--VMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQ-------- 430 (496)
Q Consensus 366 -----~~~~gt~~y~aPE~~~~~--~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~-------- 430 (496)
....++..|+|||++.+. .++.++||||+|+++|+|++|+.||...... ......+..
T Consensus 161 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~-------~~~~~~~~~~~~~~~~~ 233 (328)
T cd08226 161 VYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRT-------QMLLQKLKGPPYSPLDI 233 (328)
T ss_pred cccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChH-------HHHHHHhcCCCCCCccc
Confidence 112345679999998764 4788999999999999999999998643210 000000000
Q ss_pred --------------------------------CCCCC--CChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhc
Q 011005 431 --------------------------------RLPPP--VDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITR 476 (496)
Q Consensus 431 --------------------------------~~~~~--~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~ 476 (496)
..... ...........+.+|+.+||+.||++|||+.|+++|+|+..
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~~~ 313 (328)
T cd08226 234 TTFPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAFFKQ 313 (328)
T ss_pred cccchhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHHHHH
Confidence 00000 00001123345789999999999999999999999999987
Q ss_pred cCCC
Q 011005 477 KTPL 480 (496)
Q Consensus 477 ~~~~ 480 (496)
....
T Consensus 314 ~~~~ 317 (328)
T cd08226 314 VKEQ 317 (328)
T ss_pred HHHh
Confidence 7654
No 336
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=7.1e-37 Score=297.05 Aligned_cols=256 Identities=27% Similarity=0.373 Sum_probs=202.3
Q ss_pred CCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccch--hHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEE
Q 011005 206 DFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYE 282 (496)
Q Consensus 206 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e 282 (496)
.|...+.||+|+||.||+|... ++..||+|.+.... .......+.+|+.++++++|+|++++++++..+...++|||
T Consensus 26 ~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 105 (317)
T cd06635 26 LFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVME 105 (317)
T ss_pred hhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEe
Confidence 3777888999999999999754 68899999986432 22334578899999999999999999999999999999999
Q ss_pred ecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCC
Q 011005 283 YMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADS 362 (496)
Q Consensus 283 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 362 (496)
|+.+ ++.+.+.... ..+++..+..++.|++.|+.||| +.+++||||+|+||+++.++.++|+|||++.....
T Consensus 106 ~~~g-~l~~~~~~~~--~~l~~~~~~~i~~~i~~~l~~lH---~~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~-- 177 (317)
T cd06635 106 YCLG-SASDLLEVHK--KPLQEVEIAAITHGALQGLAYLH---SHNMIHRDIKAGNILLTEPGQVKLADFGSASIASP-- 177 (317)
T ss_pred CCCC-CHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcccEEECCCCCEEEecCCCccccCC--
Confidence 9975 7777765432 25889999999999999999999 78999999999999999999999999999865432
Q ss_pred CCccccccccccccccccc---cCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChh
Q 011005 363 SNRTLLAGTYGYIAPELAY---TMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRK 439 (496)
Q Consensus 363 ~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 439 (496)
.....+++.|+|||.+. +..++.++||||||+++|+|++|+.||.... .............+.....
T Consensus 178 --~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~-------~~~~~~~~~~~~~~~~~~~- 247 (317)
T cd06635 178 --ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN-------AMSALYHIAQNESPTLQSN- 247 (317)
T ss_pred --cccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCcc-------HHHHHHHHHhccCCCCCCc-
Confidence 22346788999999874 4568899999999999999999999985321 1111222222222211111
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCCCC
Q 011005 440 VIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTPLV 481 (496)
Q Consensus 440 ~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~~~ 481 (496)
.....+.+++.+||+.+|.+||++.++++|+|.....+..
T Consensus 248 --~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~~~~ 287 (317)
T cd06635 248 --EWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVLRERPET 287 (317)
T ss_pred --cccHHHHHHHHHHccCCcccCcCHHHHHhChhhhccCccc
Confidence 1223477899999999999999999999999997766644
No 337
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=3.8e-37 Score=289.57 Aligned_cols=252 Identities=25% Similarity=0.334 Sum_probs=204.6
Q ss_pred CCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccch-hHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEe
Q 011005 206 DFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSE-ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEY 283 (496)
Q Consensus 206 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~ 283 (496)
+|++.+.||+|+||.||++..+ +++.+++|.+.... .......+.+|+++++.++|+||+++++++......++|+||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEY 80 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehh
Confidence 4788899999999999999654 68899999987543 223345678899999999999999999999999999999999
Q ss_pred cCCCChhhhhhCCC-CCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCC
Q 011005 284 MERGSLFCNLHNNE-DAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADS 362 (496)
Q Consensus 284 ~~~g~L~~~l~~~~-~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 362 (496)
+++++|.+++.... ....+++..++.++.|++.||+||| +.+++|+||+|+||++++++.++++|||++......
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh---~~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~- 156 (256)
T cd08530 81 APFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALH---EQKILHRDLKSANILLVANDLVKIGDLGISKVLKKN- 156 (256)
T ss_pred cCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHh---hCCcccCCCCcceEEEecCCcEEEeeccchhhhccC-
Confidence 99999999886532 1236889999999999999999999 789999999999999999999999999999876544
Q ss_pred CCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHHH
Q 011005 363 SNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVIR 442 (496)
Q Consensus 363 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (496)
......+++.|+|||.+.+..++.++|+||+|+++|+|++|+.||.... .............+. ... .
T Consensus 157 -~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~-------~~~~~~~~~~~~~~~-~~~---~ 224 (256)
T cd08530 157 -MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARS-------MQDLRYKVQRGKYPP-IPP---I 224 (256)
T ss_pred -CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-------HHHHHHHHhcCCCCC-Cch---h
Confidence 2233467889999999999999999999999999999999999986322 111111222222221 111 2
Q ss_pred HHHHHHHHHHhcccCCCCCCCCHHHHHHHHH
Q 011005 443 DILLISTVSFACLQSNPKSRPTMQSVSQEFL 473 (496)
Q Consensus 443 ~~~~l~~li~~cl~~dP~~Rps~~evl~~~~ 473 (496)
....+.+++.+||+.+|++|||+.|+++|++
T Consensus 225 ~~~~~~~li~~~l~~~p~~Rp~~~~~l~~p~ 255 (256)
T cd08530 225 YSQDLQNFIRSMLQVKPKLRPNCDKILASPA 255 (256)
T ss_pred hCHHHHHHHHHHcCCCcccCCCHHHHhcCCC
Confidence 3345789999999999999999999999874
No 338
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=5.1e-37 Score=289.56 Aligned_cols=249 Identities=24% Similarity=0.317 Sum_probs=192.7
Q ss_pred ceeeecCCeeEEEEEeC-CCcEEEEEEcccchh--HHHHHHHHHHHHHHH-hhcccccccccceeecCCeEEEEEEecCC
Q 011005 211 YCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEE--LAFIKSFKNEAQVLS-QVLHRNIVKLYGYCLHKKCMFLIYEYMER 286 (496)
Q Consensus 211 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~-~l~h~niv~~~~~~~~~~~~~lV~e~~~~ 286 (496)
+.||+|+||.||+|... +++.||+|.+..... ......+..|..++. ..+|+|++++++++..++..++|+||+++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 45899999999999764 688999999875431 122233445554443 44799999999999999999999999999
Q ss_pred CChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCCCcc
Q 011005 287 GSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRT 366 (496)
Q Consensus 287 g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 366 (496)
++|.+++.... .++...+..++.|++.||.||| +.+++||||+|+||+++.++.++|+|||++..... ..
T Consensus 82 ~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~----~~ 151 (260)
T cd05611 82 GDCASLIKTLG---GLPEDWAKQYIAEVVLGVEDLH---QRGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE----NK 151 (260)
T ss_pred CCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCcEEEeecccceeccc----cc
Confidence 99999987643 5788999999999999999999 77999999999999999999999999999875432 22
Q ss_pred ccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHHHHHHH
Q 011005 367 LLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVIRDILL 446 (496)
Q Consensus 367 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (496)
...+++.|+|||.+.+..++.++||||+|+++|+|++|..||.... ...............+... .......
T Consensus 152 ~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~-------~~~~~~~~~~~~~~~~~~~-~~~~~~~ 223 (260)
T cd05611 152 KFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAET-------PDAVFDNILSRRINWPEEV-KEFCSPE 223 (260)
T ss_pred cCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCC-------HHHHHHHHHhcccCCCCcc-cccCCHH
Confidence 3467889999999988888999999999999999999999986321 1112222222221111111 1112235
Q ss_pred HHHHHHhcccCCCCCCCC---HHHHHHHHHHhcc
Q 011005 447 ISTVSFACLQSNPKSRPT---MQSVSQEFLITRK 477 (496)
Q Consensus 447 l~~li~~cl~~dP~~Rps---~~evl~~~~~~~~ 477 (496)
+.+++.+||+.+|++||+ ++|++.|+|+...
T Consensus 224 ~~~~i~~~l~~~p~~R~~~~~~~~~l~~~~~~~~ 257 (260)
T cd05611 224 AVDLINRLLCMDPAKRLGANGYQEIKSHPFFKSI 257 (260)
T ss_pred HHHHHHHHccCCHHHccCCCcHHHHHcChHhhcC
Confidence 789999999999999995 5799999988543
No 339
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.2e-37 Score=319.13 Aligned_cols=266 Identities=19% Similarity=0.217 Sum_probs=191.0
Q ss_pred HHhCCCCcceeeecCCeeEEEEEeCC--CcEEEEEE--------------ccc--chhHHHHHHHHHHHHHHHhhccccc
Q 011005 203 ATEDFDIRYCIGTGGYGSVYKAQLPN--GKVFALKK--------------LHT--SEELAFIKSFKNEAQVLSQVLHRNI 264 (496)
Q Consensus 203 ~~~~~~~~~~lg~G~~g~Vy~~~~~~--~~~vavK~--------------~~~--~~~~~~~~~~~~e~~~l~~l~h~ni 264 (496)
..++|.+.+.||+|+||+||+|..+. +..++.|. +.. .........+.+|+.++++++|+||
T Consensus 146 ~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnI 225 (501)
T PHA03210 146 FLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENI 225 (501)
T ss_pred hhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCc
Confidence 45789999999999999999986532 22222221 100 0111234567899999999999999
Q ss_pred ccccceeecCCeEEEEEEecCCCChhhhhhCCCC--CccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEec
Q 011005 265 VKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNED--AVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLN 342 (496)
Q Consensus 265 v~~~~~~~~~~~~~lV~e~~~~g~L~~~l~~~~~--~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~ 342 (496)
+++++++...+..++|++++. +++.+++..... ........+..++.||+.||.||| +++|+||||||+|||++
T Consensus 226 v~l~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH---~~gIiHrDLKP~NILl~ 301 (501)
T PHA03210 226 LKIEEILRSEANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIH---DKKLIHRDIKLENIFLN 301 (501)
T ss_pred CcEeEEEEECCeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEC
Confidence 999999999999999999985 467666653221 123346677889999999999999 78999999999999999
Q ss_pred CCCCeEEccccccccccCCCCC-ccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCC-CccccccCCCCCC
Q 011005 343 SKLEAFVADFGTARLLHADSSN-RTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP-RDILSSLSSSSDP 420 (496)
Q Consensus 343 ~~~~~kl~Dfg~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p-~~~~~~~~~~~~~ 420 (496)
.++.+||+|||+++.+...... .....||+.|+|||++.+..++.++|||||||++|||++|..+ +..... ..
T Consensus 302 ~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~-----~~ 376 (501)
T PHA03210 302 CDGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGG-----KP 376 (501)
T ss_pred CCCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCC-----CH
Confidence 9999999999999876543222 2345799999999999999999999999999999999998764 321110 00
Q ss_pred cchhHh---------------------hhcCC-CCC---CCChh--HHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHH
Q 011005 421 KIMLID---------------------VLDQR-LPP---PVDRK--VIRDILLISTVSFACLQSNPKSRPTMQSVSQEFL 473 (496)
Q Consensus 421 ~~~~~~---------------------~~~~~-~~~---~~~~~--~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~ 473 (496)
.....+ .+... ... ..... .......+.+++.+||+.||.+|||+.|+++|+|
T Consensus 377 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~hp~ 456 (501)
T PHA03210 377 GKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLALPL 456 (501)
T ss_pred HHHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhChh
Confidence 000111 00000 000 00000 0001123567788999999999999999999999
Q ss_pred Hhcc
Q 011005 474 ITRK 477 (496)
Q Consensus 474 ~~~~ 477 (496)
+...
T Consensus 457 f~~~ 460 (501)
T PHA03210 457 FSAE 460 (501)
T ss_pred hhcC
Confidence 8654
No 340
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=5.1e-37 Score=293.27 Aligned_cols=262 Identities=25% Similarity=0.336 Sum_probs=201.2
Q ss_pred CCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchh-HHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEec
Q 011005 207 FDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEE-LAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEYM 284 (496)
Q Consensus 207 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~~ 284 (496)
|.+.+.||+|++|.||+|..+ +++.+++|.+..... ......+.+|+.++++++|+||+++++++..+...++|+||+
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFM 80 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEecc
Confidence 567788999999999999764 688999999876432 233467788999999999999999999999999999999999
Q ss_pred CCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCCC
Q 011005 285 ERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSN 364 (496)
Q Consensus 285 ~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 364 (496)
++ ++.+.+.... ..+++..+..++.|++.||.||| ..+++|+||+|+||+++.++.++|+|||.+.........
T Consensus 81 ~~-~l~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~~~ 154 (283)
T cd05118 81 DT-DLYKLIKDRQ--RGLPESLIKSYLYQLLQGLAFCH---SHGILHRDLKPENLLINTEGVLKLADFGLARSFGSPVRP 154 (283)
T ss_pred CC-CHHHHHHhhc--ccCCHHHHHHHHHHHHHHHHHHH---HCCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCccc
Confidence 75 8887776543 36899999999999999999999 789999999999999999999999999999877554322
Q ss_pred ccccccccccccccccccC-CcCcccchhhHHHHHHHHHhCCCCCccccccCC---------CCCCc--chhHh---h--
Q 011005 365 RTLLAGTYGYIAPELAYTM-VMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSS---------SSDPK--IMLID---V-- 427 (496)
Q Consensus 365 ~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~---------~~~~~--~~~~~---~-- 427 (496)
.....++..|+|||.+.+. .++.++||||+|+++|+|++|+.||...+.... ..... ..... .
T Consensus 155 ~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (283)
T cd05118 155 YTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYK 234 (283)
T ss_pred ccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhhh
Confidence 3334577889999998876 788999999999999999999999853221100 00000 00000 0
Q ss_pred --hcCCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHH
Q 011005 428 --LDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLI 474 (496)
Q Consensus 428 --~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~ 474 (496)
...................+.+++.+||++||.+||++.+++.|+|+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~~~~ 283 (283)
T cd05118 235 FSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAHPYF 283 (283)
T ss_pred hhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhCCCC
Confidence 00000000011111223467899999999999999999999999884
No 341
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=8e-37 Score=287.00 Aligned_cols=252 Identities=28% Similarity=0.425 Sum_probs=206.0
Q ss_pred CCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchh-HHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEe
Q 011005 206 DFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEE-LAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEY 283 (496)
Q Consensus 206 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~ 283 (496)
+|++.+.||+|++|.||+|..+ +++.|++|.+..... ......+.+|++++++++|+|++++++++..++..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEY 80 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEec
Confidence 4788899999999999999765 678999999876542 23456789999999999999999999999999999999999
Q ss_pred cCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCC
Q 011005 284 MERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSS 363 (496)
Q Consensus 284 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 363 (496)
+++++|.+++.... .+++..+..++.|++.|+.+|| +.|++||||+|+||+++.++.++|+|||.+........
T Consensus 81 ~~~~~L~~~~~~~~---~l~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~ 154 (254)
T cd06627 81 AENGSLRQIIKKFG---PFPESLVAVYVYQVLQGLAYLH---EQGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSK 154 (254)
T ss_pred CCCCcHHHHHHhcc---CCCHHHHHHHHHHHHHHHHHHh---hCCcccCCCCHHHEEECCCCCEEEeccccceecCCCcc
Confidence 99999999987653 6899999999999999999999 78999999999999999999999999999987755443
Q ss_pred CccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHHHH
Q 011005 364 NRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVIRD 443 (496)
Q Consensus 364 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 443 (496)
......++..|+|||...+..++.++||||+|+++|+|++|+.||..... ............+. ... ..
T Consensus 155 ~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~-------~~~~~~~~~~~~~~-~~~---~~ 223 (254)
T cd06627 155 DDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNP-------MAALFRIVQDDHPP-LPE---GI 223 (254)
T ss_pred cccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccH-------HHHHHHHhccCCCC-CCC---CC
Confidence 33445688899999999888889999999999999999999999863221 11111111111111 111 11
Q ss_pred HHHHHHHHHhcccCCCCCCCCHHHHHHHHHH
Q 011005 444 ILLISTVSFACLQSNPKSRPTMQSVSQEFLI 474 (496)
Q Consensus 444 ~~~l~~li~~cl~~dP~~Rps~~evl~~~~~ 474 (496)
...+.+++.+||..+|++|||+.+++.+.|+
T Consensus 224 ~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~~ 254 (254)
T cd06627 224 SPELKDFLMQCFQKDPNLRPTAKQLLKHPWI 254 (254)
T ss_pred CHHHHHHHHHHHhCChhhCcCHHHHhcCCCC
Confidence 2356789999999999999999999998764
No 342
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=5.3e-37 Score=297.20 Aligned_cols=265 Identities=23% Similarity=0.324 Sum_probs=195.1
Q ss_pred HhCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccch-hHHHHHHHHHHHHHHHhhcccccccccceeecCC------
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSE-ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKK------ 275 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~------ 275 (496)
.++|++.+.||+|+||.||+|... +++.||+|.+.... .......+.+|+.++++++||||+++++++...+
T Consensus 11 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 90 (310)
T cd07865 11 VSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRY 90 (310)
T ss_pred hhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCC
Confidence 457999999999999999999764 68999999886532 1222345578999999999999999999886543
Q ss_pred --eEEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEcccc
Q 011005 276 --CMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFG 353 (496)
Q Consensus 276 --~~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg 353 (496)
..++||||+.+ ++.+.+.... ..+++.+++.++.|++.||+||| +.+++|+||+|+||+++.++.++|+|||
T Consensus 91 ~~~~~lv~e~~~~-~l~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH---~~~i~H~dl~p~nil~~~~~~~kl~dfg 164 (310)
T cd07865 91 KGSFYLVFEFCEH-DLAGLLSNKN--VKFTLSEIKKVMKMLLNGLYYIH---RNKILHRDMKAANILITKDGILKLADFG 164 (310)
T ss_pred CceEEEEEcCCCc-CHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEECCCCcEEECcCC
Confidence 45999999964 7877776532 25899999999999999999999 7799999999999999999999999999
Q ss_pred ccccccCCCCC----ccccccccccccccccccC-CcCcccchhhHHHHHHHHHhCCCCCccccccC-------------
Q 011005 354 TARLLHADSSN----RTLLAGTYGYIAPELAYTM-VMTEKCDVYSFGVVTLEVLMGKHPRDILSSLS------------- 415 (496)
Q Consensus 354 ~~~~~~~~~~~----~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~el~~g~~p~~~~~~~~------------- 415 (496)
++......... .....++..|+|||.+.+. .++.++||||+|+++|+|++|+.||.......
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (310)
T cd07865 165 LARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSIT 244 (310)
T ss_pred CcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCC
Confidence 99866433221 1234567889999988764 46889999999999999999999986332100
Q ss_pred CCCCCcchhHhhhcC-CCCCCCChhHH------HHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHH
Q 011005 416 SSSDPKIMLIDVLDQ-RLPPPVDRKVI------RDILLISTVSFACLQSNPKSRPTMQSVSQEFLI 474 (496)
Q Consensus 416 ~~~~~~~~~~~~~~~-~~~~~~~~~~~------~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~ 474 (496)
....+.......... ..+........ .....+.+++.+||..||++|||++|+++|+|+
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h~~f 310 (310)
T cd07865 245 PEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNHDFF 310 (310)
T ss_pred hhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcCCCC
Confidence 000000000000000 00000000000 011245689999999999999999999999885
No 343
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=1.1e-36 Score=291.54 Aligned_cols=262 Identities=25% Similarity=0.296 Sum_probs=197.5
Q ss_pred CCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchh-HHHHHHHHHHHHHHHhh---cccccccccceeecCCe-----
Q 011005 207 FDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEE-LAFIKSFKNEAQVLSQV---LHRNIVKLYGYCLHKKC----- 276 (496)
Q Consensus 207 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l---~h~niv~~~~~~~~~~~----- 276 (496)
|++.+.||+|+||.||+|..+ +++.||+|.+..... ......+.+|+.+++++ +|+|++++++++...+.
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 567889999999999999876 489999999975432 12234566788887777 49999999999988776
Q ss_pred EEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccc
Q 011005 277 MFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTAR 356 (496)
Q Consensus 277 ~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~ 356 (496)
.+++|||+.+ +|.+++..... ..+++..++.++.|++.||.||| +.+++|+||+|+||+++.++.++|+|||.+.
T Consensus 81 ~~l~~e~~~~-~l~~~l~~~~~-~~l~~~~~~~~~~~i~~al~~LH---~~~i~h~~l~~~nili~~~~~~~l~dfg~~~ 155 (287)
T cd07838 81 LTLVFEHVDQ-DLATYLSKCPK-PGLPPETIKDLMRQLLRGVDFLH---SHRIVHRDLKPQNILVTSDGQVKIADFGLAR 155 (287)
T ss_pred eEEEehhccc-CHHHHHHHccC-CCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCChhhEEEccCCCEEEeccCcce
Confidence 8999999974 88888876432 25899999999999999999999 7799999999999999999999999999997
Q ss_pred cccCCCCCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCC----------CC-----CCc
Q 011005 357 LLHADSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSS----------SS-----DPK 421 (496)
Q Consensus 357 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~----------~~-----~~~ 421 (496)
....... .....++..|+|||.+.+..++.++||||+|+++|+|++|+.||........ .. ...
T Consensus 156 ~~~~~~~-~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (287)
T cd07838 156 IYSFEMA-LTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNV 234 (287)
T ss_pred eccCCcc-cccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCCCc
Confidence 7643322 2233578899999999999999999999999999999999999864321100 00 000
Q ss_pred chhHhhhcCCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHH
Q 011005 422 IMLIDVLDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLI 474 (496)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~ 474 (496)
.........................+.+++.+||+.||++||+++|+++|+|+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~~~~ 287 (287)
T cd07838 235 SLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQHPYF 287 (287)
T ss_pred ccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcCcCC
Confidence 00000000111111111111223457789999999999999999999999874
No 344
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00 E-value=7.5e-37 Score=300.23 Aligned_cols=275 Identities=23% Similarity=0.262 Sum_probs=205.3
Q ss_pred HHHHHHHHhCCCCcceeeecCCeeEEEEEe-CCCcEEEEEEcccch-hHHHHHHHHHHHHHHHhhcccccccccceeecC
Q 011005 197 YEDLIEATEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSE-ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHK 274 (496)
Q Consensus 197 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~ 274 (496)
.+++..+.++|++.+.||+|+||.||+|.. .+++.||+|++.... .....+.+.+|+.++++++|+||+++++++...
T Consensus 9 ~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~ 88 (345)
T cd07877 9 NKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPA 88 (345)
T ss_pred HHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeec
Confidence 456667889999999999999999999964 578999999987543 222345678899999999999999999988543
Q ss_pred ------CeEEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeE
Q 011005 275 ------KCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAF 348 (496)
Q Consensus 275 ------~~~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~k 348 (496)
...+++++++ +++|.+++... .+++..+..++.|++.||+||| +.+++||||||+||+++.++.++
T Consensus 89 ~~~~~~~~~~lv~~~~-~~~L~~~~~~~----~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIll~~~~~~k 160 (345)
T cd07877 89 RSLEEFNDVYLVTHLM-GADLNNIVKCQ----KLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELK 160 (345)
T ss_pred ccccccccEEEEehhc-ccCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCChHHEEEcCCCCEE
Confidence 3467888876 78998877643 5889999999999999999999 78999999999999999999999
Q ss_pred EccccccccccCCCCCcccccccccccccccccc-CCcCcccchhhHHHHHHHHHhCCCCCccccccCC--------CCC
Q 011005 349 VADFGTARLLHADSSNRTLLAGTYGYIAPELAYT-MVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSS--------SSD 419 (496)
Q Consensus 349 l~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~--------~~~ 419 (496)
|+|||++..... ......++..|+|||.+.+ ..++.++||||+|+++|+|++|+.||........ ...
T Consensus 161 l~dfg~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~ 237 (345)
T cd07877 161 ILDFGLARHTDD---EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 237 (345)
T ss_pred Eecccccccccc---cccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCC
Confidence 999999876432 2233467889999998866 5678899999999999999999999853221000 000
Q ss_pred Ccchh--------Hhh---hcCCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCCCCC
Q 011005 420 PKIML--------IDV---LDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTPLVK 482 (496)
Q Consensus 420 ~~~~~--------~~~---~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~~~~ 482 (496)
..... ... ...................+.+++.+|++.||.+||++.++++|+|+........
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~f~~~~~~~~ 311 (345)
T cd07877 238 GAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDD 311 (345)
T ss_pred CHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcChhhhhcCCCCc
Confidence 00000 000 0000000000000011234679999999999999999999999999986554433
No 345
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-37 Score=278.33 Aligned_cols=252 Identities=24% Similarity=0.347 Sum_probs=209.9
Q ss_pred HhCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccch--hHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEE
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLI 280 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV 280 (496)
-++|+..+.||+|.||.|-+++-+ .++.||+|++++.- ..++...-..|-.+++..+||.+..+-..|+..+++|+|
T Consensus 167 m~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFV 246 (516)
T KOG0690|consen 167 MEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFV 246 (516)
T ss_pred cchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEE
Confidence 367889999999999999999654 79999999998753 122334456788999999999999999999999999999
Q ss_pred EEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccC
Q 011005 281 YEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHA 360 (496)
Q Consensus 281 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 360 (496)
|||..||.|+-++...+ .+++...+-+...|+.||.||| +++|++||+|.+|.++|.+|++||+|||+++.--.
T Consensus 247 MeyanGGeLf~HLsrer---~FsE~RtRFYGaEIvsAL~YLH---s~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~ 320 (516)
T KOG0690|consen 247 MEYANGGELFFHLSRER---VFSEDRTRFYGAEIVSALGYLH---SRNIVYRDLKLENLLLDKDGHIKITDFGLCKEEIK 320 (516)
T ss_pred EEEccCceEeeehhhhh---cccchhhhhhhHHHHHHhhhhh---hCCeeeeechhhhheeccCCceEeeecccchhccc
Confidence 99999999999988754 7899999999999999999999 78999999999999999999999999999987766
Q ss_pred CCCCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhc--CCCCCCCCh
Q 011005 361 DSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLD--QRLPPPVDR 438 (496)
Q Consensus 361 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 438 (496)
......+.||||.|+|||++.+..|..++|.|.+|+++|||++|+.||.. .+......-++- -+.|...+.
T Consensus 321 ~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn-------~dh~kLFeLIl~ed~kFPr~ls~ 393 (516)
T KOG0690|consen 321 YGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYN-------KDHEKLFELILMEDLKFPRTLSP 393 (516)
T ss_pred ccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccc-------cchhHHHHHHHhhhccCCccCCH
Confidence 66677789999999999999999999999999999999999999999852 222222211222 223332222
Q ss_pred hHHHHHHHHHHHHHhcccCCCCCCC-----CHHHHHHHHHHh
Q 011005 439 KVIRDILLISTVSFACLQSNPKSRP-----TMQSVSQEFLIT 475 (496)
Q Consensus 439 ~~~~~~~~l~~li~~cl~~dP~~Rp-----s~~evl~~~~~~ 475 (496)
....|+...|.+||.+|. .+.||.+|.|+.
T Consensus 394 -------eAktLLsGLL~kdP~kRLGgGpdDakEi~~h~FF~ 428 (516)
T KOG0690|consen 394 -------EAKTLLSGLLKKDPKKRLGGGPDDAKEIMRHRFFA 428 (516)
T ss_pred -------HHHHHHHHHhhcChHhhcCCCchhHHHHHhhhhhc
Confidence 345777899999999997 588888888764
No 346
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=100.00 E-value=3.3e-37 Score=290.83 Aligned_cols=254 Identities=24% Similarity=0.342 Sum_probs=197.7
Q ss_pred CCCCcceeeecCCeeEEEEEeCC-CcEEEEEEcccc---h-hHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEE
Q 011005 206 DFDIRYCIGTGGYGSVYKAQLPN-GKVFALKKLHTS---E-ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLI 280 (496)
Q Consensus 206 ~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~---~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV 280 (496)
+|.+.+.||+|+||.||++.... +..+++|.++.. . .......+.+|+.++++++||||+++++++.+....++|
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII 80 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence 57888999999999999997643 444555554431 1 122334567899999999999999999999999999999
Q ss_pred EEecCCCChhhhhhCC-CCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEcccccccccc
Q 011005 281 YEYMERGSLFCNLHNN-EDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLH 359 (496)
Q Consensus 281 ~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 359 (496)
+||+++++|.+.+... .....+++..++.++.|++.|+.||| +.+++|+||+|+||+++. +.++|+|||.+....
T Consensus 81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~ 156 (260)
T cd08222 81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMH---QRRILHRDLKAKNIFLKN-NLLKIGDFGVSRLLM 156 (260)
T ss_pred EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHH---HcCccccCCChhheEeec-CCEeecccCceeecC
Confidence 9999999999888642 22346899999999999999999999 789999999999999986 569999999998765
Q ss_pred CCCCCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChh
Q 011005 360 ADSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRK 439 (496)
Q Consensus 360 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 439 (496)
..........+++.|+|||.+.+..++.++|+||+|+++|+|++|..||.... .............+. ..
T Consensus 157 ~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~-------~~~~~~~~~~~~~~~-~~-- 226 (260)
T cd08222 157 GSCDLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQN-------FLSVVLRIVEGPTPS-LP-- 226 (260)
T ss_pred CCcccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCcc-------HHHHHHHHHcCCCCC-Cc--
Confidence 44433444567889999999988888999999999999999999999985221 111112222221111 11
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHH
Q 011005 440 VIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLI 474 (496)
Q Consensus 440 ~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~ 474 (496)
......+.+++.+||+.+|++||++.|+++|+|+
T Consensus 227 -~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~ 260 (260)
T cd08222 227 -ETYSRQLNSIMQSMLNKDPSLRPSAAEILRNPFI 260 (260)
T ss_pred -chhcHHHHHHHHHHhcCChhhCcCHHHHhhCCCC
Confidence 1223357789999999999999999999999874
No 347
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00 E-value=1.6e-36 Score=289.88 Aligned_cols=262 Identities=23% Similarity=0.310 Sum_probs=197.9
Q ss_pred CCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchhHHHHHHHHHHHHHHHhhc-ccccccccceeecCCeEEEEEEec
Q 011005 207 FDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVL-HRNIVKLYGYCLHKKCMFLIYEYM 284 (496)
Q Consensus 207 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lV~e~~ 284 (496)
|++.+.||+|++|+||+|... +++.|++|.+.............+|+..+++++ |+|++++++++..++..++||||+
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM 80 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC
Confidence 567889999999999999875 578899999866432222234467899999998 999999999999999999999999
Q ss_pred CCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCCC
Q 011005 285 ERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSN 364 (496)
Q Consensus 285 ~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 364 (496)
+|+|.+.+.... ...+++..+..++.|++.+|.||| +.+++|+||+|+||++++++.++|+|||.+....... .
T Consensus 81 -~~~l~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~Lh---~~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~-~ 154 (283)
T cd07830 81 -EGNLYQLMKDRK-GKPFSESVIRSIIYQILQGLAHIH---KHGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRP-P 154 (283)
T ss_pred -CCCHHHHHHhcc-cccCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChhhEEEcCCCCEEEeecccceeccCCC-C
Confidence 789998887654 236799999999999999999999 7799999999999999999999999999998664322 2
Q ss_pred ccccccccccccccccc-cCCcCcccchhhHHHHHHHHHhCCCCCccccccCC---------CCCCcc-----hhHhhhc
Q 011005 365 RTLLAGTYGYIAPELAY-TMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSS---------SSDPKI-----MLIDVLD 429 (496)
Q Consensus 365 ~~~~~gt~~y~aPE~~~-~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~---------~~~~~~-----~~~~~~~ 429 (496)
.....++..|+|||.+. ...++.++|+||||+++|+|++|+.||........ ...... .......
T Consensus 155 ~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (283)
T cd07830 155 YTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLG 234 (283)
T ss_pred cCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhcccc
Confidence 23346788999999875 45578999999999999999999999853321100 000000 0000000
Q ss_pred CCCCCCC----ChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHH
Q 011005 430 QRLPPPV----DRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLI 474 (496)
Q Consensus 430 ~~~~~~~----~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~ 474 (496)
...+... ..........+.+++.+||+.||++|||++|++.++|+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~~~~ 283 (283)
T cd07830 235 FRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQHPYF 283 (283)
T ss_pred ccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhCCCC
Confidence 0111000 00000112457899999999999999999999999874
No 348
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=6.2e-37 Score=300.54 Aligned_cols=271 Identities=24% Similarity=0.279 Sum_probs=200.9
Q ss_pred HhCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccch-hHHHHHHHHHHHHHHHhhcccccccccceeecCC------
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSE-ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKK------ 275 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~------ 275 (496)
.++|.+.+.||+|+||.||+|... +|+.||+|++.... .......+.+|+.+++.++|+||+++++++....
T Consensus 14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 93 (342)
T cd07879 14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQ 93 (342)
T ss_pred ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCc
Confidence 478999999999999999999764 68999999987532 2223356789999999999999999999986542
Q ss_pred eEEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEcccccc
Q 011005 276 CMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTA 355 (496)
Q Consensus 276 ~~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~ 355 (496)
..++|+||+.. ++..... ..+++..+..++.|++.||+||| ..+++||||||+||+++.++.++|+|||++
T Consensus 94 ~~~lv~e~~~~-~l~~~~~-----~~~~~~~~~~~~~qi~~aL~~LH---~~~i~H~dlkp~NIll~~~~~~kL~dfg~~ 164 (342)
T cd07879 94 DFYLVMPYMQT-DLQKIMG-----HPLSEDKVQYLVYQMLCGLKYIH---SAGIIHRDLKPGNLAVNEDCELKILDFGLA 164 (342)
T ss_pred eEEEEeccccc-CHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEeeCCCC
Confidence 46899999864 6665542 15788999999999999999999 779999999999999999999999999998
Q ss_pred ccccCCCCCcccccccccccccccccc-CCcCcccchhhHHHHHHHHHhCCCCCccccccCCC-------CCCcchh---
Q 011005 356 RLLHADSSNRTLLAGTYGYIAPELAYT-MVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSS-------SDPKIML--- 424 (496)
Q Consensus 356 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~-------~~~~~~~--- 424 (496)
+.... ......+++.|+|||.+.+ ..++.++||||||+++|||++|+.||......... ..+....
T Consensus 165 ~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (342)
T cd07879 165 RHADA---EMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQK 241 (342)
T ss_pred cCCCC---CCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHH
Confidence 76432 2223467889999999876 46888999999999999999999999642210000 0000000
Q ss_pred ------HhhhcC--CCC-CCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCCCCCcccc
Q 011005 425 ------IDVLDQ--RLP-PPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTPLVKHAAI 486 (496)
Q Consensus 425 ------~~~~~~--~~~-~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~~~~~~~~ 486 (496)
...... ..+ .............+.+++.+||+.||++||+++|+++|+|+....+.......
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~~~~~~~~~ 312 (342)
T cd07879 242 LEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFRDADEETEQ 312 (342)
T ss_pred hcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhcccccccCCC
Confidence 000000 000 00000000112347799999999999999999999999999887765544443
No 349
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=1.6e-36 Score=297.25 Aligned_cols=267 Identities=29% Similarity=0.343 Sum_probs=199.8
Q ss_pred HHhCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccch-hHHHHHHHHHHHHHHHhh-cccccccccceeecC--CeE
Q 011005 203 ATEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSE-ELAFIKSFKNEAQVLSQV-LHRNIVKLYGYCLHK--KCM 277 (496)
Q Consensus 203 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~--~~~ 277 (496)
..++|++.+.||+|+||.||+|.+. +++.+|+|++.... .......+.+|+.+++++ +|+||+++++++... ...
T Consensus 5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~ 84 (337)
T cd07852 5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDI 84 (337)
T ss_pred hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceE
Confidence 4678999999999999999999765 68899999885421 222335577899999999 999999999988653 468
Q ss_pred EEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEcccccccc
Q 011005 278 FLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARL 357 (496)
Q Consensus 278 ~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 357 (496)
++||||+. ++|..++... .+++..+..++.||+.||+||| +.+++||||||+||+++.++.++|+|||++..
T Consensus 85 ~lv~e~~~-~~L~~~~~~~----~~~~~~~~~i~~qi~~~L~~LH---~~~i~H~dl~p~nill~~~~~~kl~d~g~~~~ 156 (337)
T cd07852 85 YLVFEYME-TDLHAVIRAN----ILEDVHKRYIMYQLLKALKYIH---SGNVIHRDLKPSNILLNSDCRVKLADFGLARS 156 (337)
T ss_pred EEEecccc-cCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCcEEEeeccchhc
Confidence 99999997 5898888653 5788888999999999999999 78999999999999999999999999999987
Q ss_pred ccCCCC-----Ccccccccccccccccccc-CCcCcccchhhHHHHHHHHHhCCCCCccccccCC--------CCCCcch
Q 011005 358 LHADSS-----NRTLLAGTYGYIAPELAYT-MVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSS--------SSDPKIM 423 (496)
Q Consensus 358 ~~~~~~-----~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~--------~~~~~~~ 423 (496)
...... ......+++.|+|||.+.+ ..++.++||||||+++|+|++|+.||........ .......
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 236 (337)
T cd07852 157 LSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAED 236 (337)
T ss_pred cccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHH
Confidence 643321 1223467889999998765 4578899999999999999999999863221100 0000000
Q ss_pred --------hHhhhcCCC---CCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhcc
Q 011005 424 --------LIDVLDQRL---PPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRK 477 (496)
Q Consensus 424 --------~~~~~~~~~---~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~ 477 (496)
....+.... ..............+.+++.+||+.||++|||+.++++++|+..-
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~~~~~~~ 301 (337)
T cd07852 237 IESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEHPYVAQF 301 (337)
T ss_pred HHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhChhhhhh
Confidence 000000000 000000000113457899999999999999999999999988654
No 350
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00 E-value=5.5e-37 Score=298.91 Aligned_cols=273 Identities=22% Similarity=0.289 Sum_probs=204.5
Q ss_pred HHHHhCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccch-hHHHHHHHHHHHHHHHhhcccccccccceeec-CCeE
Q 011005 201 IEATEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSE-ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLH-KKCM 277 (496)
Q Consensus 201 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-~~~~ 277 (496)
..++++|++.+.||+|+||.||+|..+ +++.||+|++.... .....+.+.+|+++++.++||||+++++++.. ....
T Consensus 6 ~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 85 (328)
T cd07856 6 FEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDI 85 (328)
T ss_pred eccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcE
Confidence 446789999999999999999999654 78999999876432 22234667889999999999999999998865 5578
Q ss_pred EEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEcccccccc
Q 011005 278 FLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARL 357 (496)
Q Consensus 278 ~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 357 (496)
++|+||+ +++|..++... .++...+..++.|++.||.||| ..+++||||+|+||++++++.++|+|||.+..
T Consensus 86 ~lv~e~~-~~~L~~~~~~~----~~~~~~~~~~~~ql~~aL~~LH---~~~iiH~dl~p~Nili~~~~~~~l~dfg~~~~ 157 (328)
T cd07856 86 YFVTELL-GTDLHRLLTSR----PLEKQFIQYFLYQILRGLKYVH---SAGVVHRDLKPSNILINENCDLKICDFGLARI 157 (328)
T ss_pred EEEeehh-ccCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEeECCCCCEEeCccccccc
Confidence 8999998 56888887643 4678888899999999999999 78999999999999999999999999999975
Q ss_pred ccCCCCCcccccccccccccccccc-CCcCcccchhhHHHHHHHHHhCCCCCccccccCC--------CCCCcch-----
Q 011005 358 LHADSSNRTLLAGTYGYIAPELAYT-MVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSS--------SSDPKIM----- 423 (496)
Q Consensus 358 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~--------~~~~~~~----- 423 (496)
.... .....+++.|+|||.+.+ ..++.++||||+|+++|+|++|+.||........ ...+...
T Consensus 158 ~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (328)
T cd07856 158 QDPQ---MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTIC 234 (328)
T ss_pred cCCC---cCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhcc
Confidence 4322 223457889999998766 5688999999999999999999999853221000 0000000
Q ss_pred ---hHhhhcC---CCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCCCCCcc
Q 011005 424 ---LIDVLDQ---RLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTPLVKHA 484 (496)
Q Consensus 424 ---~~~~~~~---~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~~~~~~ 484 (496)
..+.... ..+.+...........+.+++.+||+.+|++|||+++++.++|+.........+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~~~~~~~~~~~~~~ 301 (328)
T cd07856 235 SENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAHPYLAPYHDPTDEP 301 (328)
T ss_pred chhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCCccccccCCcccc
Confidence 0000000 000010000011124578999999999999999999999999997766554443
No 351
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=7.9e-37 Score=287.92 Aligned_cols=239 Identities=22% Similarity=0.409 Sum_probs=186.4
Q ss_pred ceeeecCCeeEEEEEeCC--------CcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEE
Q 011005 211 YCIGTGGYGSVYKAQLPN--------GKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYE 282 (496)
Q Consensus 211 ~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e 282 (496)
+.||+|+||.||+|.... ...|++|.+.... ....+.+.+|+.+++.++||||+++++++..+...++|||
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e 79 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSH-RNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQE 79 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchh-HHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEe
Confidence 358999999999996532 2347888875433 2344678889999999999999999999999889999999
Q ss_pred ecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCC--------eEEccccc
Q 011005 283 YMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLE--------AFVADFGT 354 (496)
Q Consensus 283 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~--------~kl~Dfg~ 354 (496)
|+++|+|.+++..... .+++..++.++.||+.||+||| +++++||||||+||+++.++. ++++|||.
T Consensus 80 ~~~~g~L~~~l~~~~~--~~~~~~~~~~~~qi~~~l~~lH---~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~ 154 (258)
T cd05078 80 YVKFGSLDTYLKKNKN--LINISWKLEVAKQLAWALHFLE---DKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGI 154 (258)
T ss_pred cCCCCcHHHHHhcCCC--CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCccceEEEecccccccCCCceEEeccccc
Confidence 9999999999986543 5788999999999999999999 789999999999999987765 68999998
Q ss_pred cccccCCCCCccccccccccccccccccC-CcCcccchhhHHHHHHHHHhCC-CCCccccccCCCCCCcchhHhhhcCCC
Q 011005 355 ARLLHADSSNRTLLAGTYGYIAPELAYTM-VMTEKCDVYSFGVVTLEVLMGK-HPRDILSSLSSSSDPKIMLIDVLDQRL 432 (496)
Q Consensus 355 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~el~~g~-~p~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (496)
+..... .....++..|+|||.+.+. .++.++||||||+++|+|++|. .|+..... ...........
T Consensus 155 ~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~--------~~~~~~~~~~~ 222 (258)
T cd05078 155 SITVLP----KEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDS--------QKKLQFYEDRH 222 (258)
T ss_pred ccccCC----chhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccH--------HHHHHHHHccc
Confidence 865432 2234678899999999874 5789999999999999999984 56542211 11111122211
Q ss_pred CCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHH
Q 011005 433 PPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEF 472 (496)
Q Consensus 433 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~ 472 (496)
..+.. ....+.+++.+||+.||++|||++++++.+
T Consensus 223 ~~~~~-----~~~~~~~li~~~l~~~p~~Rps~~~il~~l 257 (258)
T cd05078 223 QLPAP-----KWTELANLINQCMDYEPDFRPSFRAIIRDL 257 (258)
T ss_pred cCCCC-----CcHHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence 11111 112467999999999999999999999874
No 352
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=9.3e-37 Score=292.01 Aligned_cols=262 Identities=28% Similarity=0.367 Sum_probs=198.4
Q ss_pred CCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccch-hHHHHHHHHHHHHHHHhhcccccccccceeecC--CeEEEEEE
Q 011005 207 FDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSE-ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHK--KCMFLIYE 282 (496)
Q Consensus 207 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~lV~e 282 (496)
|++.+.||+|+||.||+|... +++.+|+|.+.... .......+.+|+.++++++|+|++++++++... +..++|+|
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 80 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE 80 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence 567889999999999999765 58899999998653 223345678999999999999999999999888 78999999
Q ss_pred ecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCC
Q 011005 283 YMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADS 362 (496)
Q Consensus 283 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 362 (496)
|+++ +|.+++.... ..+++..++.++.||+.||+||| ..+++|+||+|+||++++++.++|+|||++.......
T Consensus 81 ~~~~-~l~~~~~~~~--~~~~~~~~~~i~~~i~~al~~LH---~~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~ 154 (287)
T cd07840 81 YMDH-DLTGLLDSPE--VKFTESQIKCYMKQLLEGLQYLH---SNGILHRDIKGSNILINNDGVLKLADFGLARPYTKRN 154 (287)
T ss_pred cccc-cHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCcHHHeEEcCCCCEEEccccceeeccCCC
Confidence 9975 8888876542 36899999999999999999999 7799999999999999999999999999998765433
Q ss_pred C-Ccccccccccccccccccc-CCcCcccchhhHHHHHHHHHhCCCCCccccccCC---------CCCCcc--hhHh--h
Q 011005 363 S-NRTLLAGTYGYIAPELAYT-MVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSS---------SSDPKI--MLID--V 427 (496)
Q Consensus 363 ~-~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~---------~~~~~~--~~~~--~ 427 (496)
. ......++..|+|||.+.+ ..++.++||||||+++|+|++|+.||........ ...... .... .
T Consensus 155 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (287)
T cd07840 155 SADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPW 234 (287)
T ss_pred cccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccchh
Confidence 1 1223456788999998765 4578999999999999999999999863321100 000000 0000 0
Q ss_pred hc-CCCCCCCCh---hHHH--HHHHHHHHHHhcccCCCCCCCCHHHHHHHHHH
Q 011005 428 LD-QRLPPPVDR---KVIR--DILLISTVSFACLQSNPKSRPTMQSVSQEFLI 474 (496)
Q Consensus 428 ~~-~~~~~~~~~---~~~~--~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~ 474 (496)
.. ......... .... ....+.+++.+||+.+|++||++.++++++|+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~~~~ 287 (287)
T cd07840 235 FENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQHEYF 287 (287)
T ss_pred hhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhCcCC
Confidence 00 000000000 0000 13457899999999999999999999999885
No 353
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.8e-38 Score=321.70 Aligned_cols=261 Identities=26% Similarity=0.340 Sum_probs=212.3
Q ss_pred HHHHHHhCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccch--hHHHHHHHHHHHHHHHhhcccccccccceeecCC
Q 011005 199 DLIEATEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKK 275 (496)
Q Consensus 199 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~ 275 (496)
++.-..++|.+.+.||+|+||.|..++++ .++.||.|++.+-. .......|..|-.+|..-+.+=|+.++-.|.+..
T Consensus 69 ~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~ 148 (1317)
T KOG0612|consen 69 ELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDER 148 (1317)
T ss_pred HHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCcc
Confidence 33444688999999999999999999876 58889999997732 2234567899999999999999999999999999
Q ss_pred eEEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEcccccc
Q 011005 276 CMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTA 355 (496)
Q Consensus 276 ~~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~ 355 (496)
++|+|||||+||+|..++.+.. .+++.-++.++..|+-||..+| ..|+|||||||+|||+|..|++||+|||.+
T Consensus 149 ~LYlVMdY~pGGDlltLlSk~~---~~pE~~ArFY~aEiVlAldslH---~mgyVHRDiKPDNvLld~~GHikLADFGsC 222 (1317)
T KOG0612|consen 149 YLYLVMDYMPGGDLLTLLSKFD---RLPEDWARFYTAEIVLALDSLH---SMGYVHRDIKPDNVLLDKSGHIKLADFGSC 222 (1317)
T ss_pred ceEEEEecccCchHHHHHhhcC---CChHHHHHHHHHHHHHHHHHHH---hccceeccCCcceeEecccCcEeeccchhH
Confidence 9999999999999999999865 6888999999999999999999 789999999999999999999999999999
Q ss_pred ccccCCCCC-ccccccccccccccccc----c-CCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhc
Q 011005 356 RLLHADSSN-RTLLAGTYGYIAPELAY----T-MVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLD 429 (496)
Q Consensus 356 ~~~~~~~~~-~~~~~gt~~y~aPE~~~----~-~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 429 (496)
-.+..++.. ....+|||.|.+||++. + +.|+..+|.||+||++|||+.|..||-..+ .-.....+++
T Consensus 223 lkm~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYads-------lveTY~KIm~ 295 (1317)
T KOG0612|consen 223 LKMDADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADS-------LVETYGKIMN 295 (1317)
T ss_pred HhcCCCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHH-------HHHHHHHHhc
Confidence 988765543 45678999999999986 3 578999999999999999999999995221 1223344444
Q ss_pred C--CCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCC---HHHHHHHHHHhc
Q 011005 430 Q--RLPPPVDRKVIRDILLISTVSFACLQSNPKSRPT---MQSVSQEFLITR 476 (496)
Q Consensus 430 ~--~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps---~~evl~~~~~~~ 476 (496)
. .+..|.... ......+||.+.+. +|+.|.. ++++-.|+||.+
T Consensus 296 hk~~l~FP~~~~---VSeeakdLI~~ll~-~~e~RLgrngiedik~HpFF~g 343 (1317)
T KOG0612|consen 296 HKESLSFPDETD---VSEEAKDLIEALLC-DREVRLGRNGIEDIKNHPFFEG 343 (1317)
T ss_pred hhhhcCCCcccc---cCHHHHHHHHHHhc-ChhhhcccccHHHHHhCccccC
Confidence 4 333331111 22235677766554 7888888 999999988753
No 354
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00 E-value=2.1e-36 Score=292.59 Aligned_cols=256 Identities=27% Similarity=0.379 Sum_probs=200.9
Q ss_pred hCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccc--hhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEE
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTS--EELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIY 281 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~ 281 (496)
..|+..+.||+|+||.||+|... +++.+|+|.+... ......+.+.+|+++++.++|+|++++++++..+...++||
T Consensus 15 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 94 (308)
T cd06634 15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 94 (308)
T ss_pred HHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEE
Confidence 34777788999999999999764 6788999988642 12233456788999999999999999999999999999999
Q ss_pred EecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCC
Q 011005 282 EYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHAD 361 (496)
Q Consensus 282 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 361 (496)
||+. |++.+.+.... ..+++..+..++.|++.|+.||| +.+++||||+|+||+++.++.++|+|||++......
T Consensus 95 e~~~-~~l~~~~~~~~--~~l~~~~~~~~~~~l~~~l~~LH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~ 168 (308)
T cd06634 95 EYCL-GSASDLLEVHK--KPLQEVEIAAVTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA 168 (308)
T ss_pred EccC-CCHHHHHHHcC--CCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHhEEECCCCcEEECCcccceeecCc
Confidence 9996 57877765432 25788999999999999999999 779999999999999999999999999998765322
Q ss_pred CCCccccccccccccccccc---cCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCCh
Q 011005 362 SSNRTLLAGTYGYIAPELAY---TMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDR 438 (496)
Q Consensus 362 ~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (496)
....+++.|+|||.+. ...++.++||||||+++|+|++|+.||.... .............+....
T Consensus 169 ----~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~-------~~~~~~~~~~~~~~~~~~- 236 (308)
T cd06634 169 ----NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN-------AMSALYHIAQNESPALQS- 236 (308)
T ss_pred ----ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCcccc-------HHHHHHHHhhcCCCCcCc-
Confidence 2346788999999874 3567889999999999999999999985321 111111112122211111
Q ss_pred hHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCCC
Q 011005 439 KVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTPL 480 (496)
Q Consensus 439 ~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~~ 480 (496)
......+.+++.+||+.+|++||++.++++|+|+....+.
T Consensus 237 --~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~~~~~~~~ 276 (308)
T cd06634 237 --GHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRERPP 276 (308)
T ss_pred --ccccHHHHHHHHHHhhCCcccCCCHHHHhhCccccccCCh
Confidence 1122347789999999999999999999999999886553
No 355
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=5.3e-37 Score=307.17 Aligned_cols=259 Identities=26% Similarity=0.420 Sum_probs=222.9
Q ss_pred HHhCCCCcceeeecCCeeEEEEEe-CCCcEEEEEEcccchhHHHHHHHHHHHHHHHhh-cccccccccceeec-----CC
Q 011005 203 ATEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSEELAFIKSFKNEAQVLSQV-LHRNIVKLYGYCLH-----KK 275 (496)
Q Consensus 203 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~-----~~ 275 (496)
.++.|++.+.||.|.+|.||+++. ++++.+|+|+.....+.+ .+...|+++++.. .|||++.++|++.. ++
T Consensus 17 p~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~d--eEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~D 94 (953)
T KOG0587|consen 17 PADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDEE--EEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGD 94 (953)
T ss_pred CCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCcccc--HHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCC
Confidence 456799999999999999999964 578999999988766544 5677899999988 59999999999864 46
Q ss_pred eEEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEcccccc
Q 011005 276 CMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTA 355 (496)
Q Consensus 276 ~~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~ 355 (496)
.+|+|||||.|||.-++++... +..+.|+.+..|++.++.|+.||| ...++|||||-.|||++.++.||++|||.+
T Consensus 95 qLWLVMEfC~gGSVTDLVKn~~-g~rl~E~~IaYI~re~lrgl~HLH---~nkviHRDikG~NiLLT~e~~VKLvDFGvS 170 (953)
T KOG0587|consen 95 QLWLVMEFCGGGSVTDLVKNTK-GNRLKEEWIAYILREILRGLAHLH---NNKVIHRDIKGQNVLLTENAEVKLVDFGVS 170 (953)
T ss_pred eEEEEeeccCCccHHHHHhhhc-ccchhhHHHHHHHHHHHHHHHHHh---hcceeeecccCceEEEeccCcEEEeeeeee
Confidence 8999999999999999999876 668999999999999999999999 778999999999999999999999999999
Q ss_pred ccccCCCCCccccccccccccccccccC-----CcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcC
Q 011005 356 RLLHADSSNRTLLAGTYGYIAPELAYTM-----VMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQ 430 (496)
Q Consensus 356 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 430 (496)
..+...-....+.+|||.|||||++... .|+.++|+||||++..||..|.+|+-.+.+ +..-+...
T Consensus 171 aQldsT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHP---------mraLF~Ip 241 (953)
T KOG0587|consen 171 AQLDSTVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHP---------MRALFLIP 241 (953)
T ss_pred eeeecccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcch---------hhhhccCC
Confidence 9887766677788999999999998643 577799999999999999999999764432 23333344
Q ss_pred CCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhc
Q 011005 431 RLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITR 476 (496)
Q Consensus 431 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~ 476 (496)
+-|++....+..+...+.++|..||..|-++||++.++++|+|++.
T Consensus 242 RNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~hpFi~e 287 (953)
T KOG0587|consen 242 RNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLKHPFITE 287 (953)
T ss_pred CCCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhccCCcccc
Confidence 5555555667777788999999999999999999999999999983
No 356
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00 E-value=2.6e-36 Score=287.55 Aligned_cols=249 Identities=21% Similarity=0.235 Sum_probs=190.4
Q ss_pred eeeecCCeeEEEEEeC-CCcEEEEEEcccchh--HHHHHHHHHHHHH---HHhhcccccccccceeecCCeEEEEEEecC
Q 011005 212 CIGTGGYGSVYKAQLP-NGKVFALKKLHTSEE--LAFIKSFKNEAQV---LSQVLHRNIVKLYGYCLHKKCMFLIYEYME 285 (496)
Q Consensus 212 ~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~---l~~l~h~niv~~~~~~~~~~~~~lV~e~~~ 285 (496)
.||+|+||.||+|... +++.||+|.+..... ......+..|..+ ++...||+|+.+++++...+..++||||+.
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 3899999999999764 588999998865321 1111223344433 344469999999999999999999999999
Q ss_pred CCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCCCc
Q 011005 286 RGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNR 365 (496)
Q Consensus 286 ~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 365 (496)
||+|..++.... .+++..+..++.|++.|+.||| +.+++||||||+||+++.++.++|+|||++...... ..
T Consensus 81 g~~L~~~l~~~~---~l~~~~~~~~~~ql~~~l~~lH---~~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~--~~ 152 (278)
T cd05606 81 GGDLHYHLSQHG---VFSEAEMRFYAAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK--KP 152 (278)
T ss_pred CCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---HCCEEcCCCCHHHEEECCCCCEEEccCcCccccCcc--CC
Confidence 999998887543 6899999999999999999999 789999999999999999999999999998765332 22
Q ss_pred cccccccccccccccccC-CcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHHHHH
Q 011005 366 TLLAGTYGYIAPELAYTM-VMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVIRDI 444 (496)
Q Consensus 366 ~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (496)
....|+..|+|||.+.+. .++.++||||+|+++|+|++|+.||...... .......... ........ ...
T Consensus 153 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~-----~~~~~~~~~~-~~~~~~~~---~~s 223 (278)
T cd05606 153 HASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTK-----DKHEIDRMTL-TMAVELPD---SFS 223 (278)
T ss_pred cCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCcc-----chHHHHHHhh-ccCCCCCC---cCC
Confidence 334689999999998754 6889999999999999999999999643211 0011111111 11111111 012
Q ss_pred HHHHHHHHhcccCCCCCCC-----CHHHHHHHHHHhcc
Q 011005 445 LLISTVSFACLQSNPKSRP-----TMQSVSQEFLITRK 477 (496)
Q Consensus 445 ~~l~~li~~cl~~dP~~Rp-----s~~evl~~~~~~~~ 477 (496)
..+.+++.+|+..+|.+|| ++.++++|+|+...
T Consensus 224 ~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~~~~~~~ 261 (278)
T cd05606 224 PELRSLLEGLLQRDVNRRLGCLGRGAQEVKEHPFFRSL 261 (278)
T ss_pred HHHHHHHHHHhhcCHHhccCCCCCCHHHHHhCccccCC
Confidence 3577899999999999999 99999999998664
No 357
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=100.00 E-value=7e-37 Score=299.59 Aligned_cols=266 Identities=24% Similarity=0.244 Sum_probs=199.8
Q ss_pred HhCCCC-cceeeecCCeeEEEEEeC-CCcEEEEEEcccchhHH-------------HHHHHHHHHHHHHhhccccccccc
Q 011005 204 TEDFDI-RYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELA-------------FIKSFKNEAQVLSQVLHRNIVKLY 268 (496)
Q Consensus 204 ~~~~~~-~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-------------~~~~~~~e~~~l~~l~h~niv~~~ 268 (496)
.++|.. .+.||+|+||+||+|..+ +++.||+|.+....... ....+.+|+++++.++|+||++++
T Consensus 7 ~~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~ 86 (335)
T PTZ00024 7 SERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLV 86 (335)
T ss_pred ccchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeee
Confidence 356654 567999999999999754 68999999986543211 012467899999999999999999
Q ss_pred ceeecCCeEEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeE
Q 011005 269 GYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAF 348 (496)
Q Consensus 269 ~~~~~~~~~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~k 348 (496)
+++..++..++||||+. |+|.+++.... .+++.....++.|++.||.||| +.+++|+||+|+||+++.++.++
T Consensus 87 ~~~~~~~~~~lv~e~~~-~~l~~~l~~~~---~~~~~~~~~~~~ql~~aL~~LH---~~~i~H~dl~~~nill~~~~~~k 159 (335)
T PTZ00024 87 DVYVEGDFINLVMDIMA-SDLKKVVDRKI---RLTESQVKCILLQILNGLNVLH---KWYFMHRDLSPANIFINSKGICK 159 (335)
T ss_pred EEEecCCcEEEEEeccc-cCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---hCCeecccccHHHeEECCCCCEE
Confidence 99999999999999997 58988886543 6889999999999999999999 78999999999999999999999
Q ss_pred EccccccccccCC--------------CCCccccccccccccccccccC-CcCcccchhhHHHHHHHHHhCCCCCccccc
Q 011005 349 VADFGTARLLHAD--------------SSNRTLLAGTYGYIAPELAYTM-VMTEKCDVYSFGVVTLEVLMGKHPRDILSS 413 (496)
Q Consensus 349 l~Dfg~~~~~~~~--------------~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~el~~g~~p~~~~~~ 413 (496)
|+|||++...... ........+++.|+|||.+.+. .++.++||||+|+++|+|++|+.||.....
T Consensus 160 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~ 239 (335)
T PTZ00024 160 IADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENE 239 (335)
T ss_pred ECCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH
Confidence 9999999766411 1111223467889999998764 468899999999999999999999863321
Q ss_pred cCCCCCCcchhHhhhc--------------------CCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHH
Q 011005 414 LSSSSDPKIMLIDVLD--------------------QRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFL 473 (496)
Q Consensus 414 ~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~ 473 (496)
... ......... ...+.............+.+++.+||+.+|++|||++|++.|+|
T Consensus 240 ~~~----~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~~~ 315 (335)
T PTZ00024 240 IDQ----LGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKHEY 315 (335)
T ss_pred HHH----HHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhcCcc
Confidence 100 000000000 00000000000011234779999999999999999999999999
Q ss_pred HhccCCC
Q 011005 474 ITRKTPL 480 (496)
Q Consensus 474 ~~~~~~~ 480 (496)
+......
T Consensus 316 ~~~~~~~ 322 (335)
T PTZ00024 316 FKSDPLP 322 (335)
T ss_pred cCCCCCC
Confidence 9866444
No 358
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=100.00 E-value=1.9e-36 Score=283.84 Aligned_cols=244 Identities=27% Similarity=0.378 Sum_probs=199.8
Q ss_pred eeecCCeeEEEEEeC-CCcEEEEEEcccchh--HHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEecCCCCh
Q 011005 213 IGTGGYGSVYKAQLP-NGKVFALKKLHTSEE--LAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEYMERGSL 289 (496)
Q Consensus 213 lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~~~~g~L 289 (496)
||+|+||.||++... +++.+|+|.+..... ......+.+|+++++.++|+|++++++.+..+...++||||+++++|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 689999999999765 588999999876432 22446788999999999999999999999999999999999999999
Q ss_pred hhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCCCccccc
Q 011005 290 FCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLA 369 (496)
Q Consensus 290 ~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 369 (496)
.+++.... .+++..+..++.|++.|+.||| +.+++|+||+|+||+++.++.++|+|||++..............
T Consensus 81 ~~~l~~~~---~l~~~~~~~~~~qi~~~l~~lh---~~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~ 154 (250)
T cd05123 81 FSHLSKEG---RFSEERARFYAAEIVLALEYLH---SLGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSRTNTFC 154 (250)
T ss_pred HHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCcceEEEcCCCcEEEeecCcceecccCCCcccCCc
Confidence 99997654 5789999999999999999999 78999999999999999999999999999987654433344456
Q ss_pred cccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHHHHHHHHHH
Q 011005 370 GTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVIRDILLIST 449 (496)
Q Consensus 370 gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 449 (496)
++..|+|||...+...+.++|+||||+++|++++|+.||.... ...............+.. ....+.+
T Consensus 155 ~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~-------~~~~~~~~~~~~~~~~~~-----~~~~l~~ 222 (250)
T cd05123 155 GTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAED-------RKEIYEKILKDPLRFPEF-----LSPEARD 222 (250)
T ss_pred CCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCC-------HHHHHHHHhcCCCCCCCC-----CCHHHHH
Confidence 7889999999998888999999999999999999999986322 111222222222221111 1234678
Q ss_pred HHHhcccCCCCCCCCH---HHHHHHHHH
Q 011005 450 VSFACLQSNPKSRPTM---QSVSQEFLI 474 (496)
Q Consensus 450 li~~cl~~dP~~Rps~---~evl~~~~~ 474 (496)
++.+||..||++||++ +++++|+|+
T Consensus 223 ~i~~~l~~~p~~R~~~~~~~~l~~~~~f 250 (250)
T cd05123 223 LISGLLQKDPTKRLGSGGAEEIKAHPFF 250 (250)
T ss_pred HHHHHhcCCHhhCCCcccHHHHHhCCCC
Confidence 9999999999999999 899998875
No 359
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00 E-value=2.1e-36 Score=293.14 Aligned_cols=256 Identities=28% Similarity=0.354 Sum_probs=199.9
Q ss_pred CCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccch--hHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEe
Q 011005 207 FDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEY 283 (496)
Q Consensus 207 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~ 283 (496)
|...+.||+|+||+||+|... +++.|++|.+.... .......+.+|+.+++.++|+|++++++++.+....++||||
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 102 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY 102 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence 666778999999999999764 68899999986432 223345678899999999999999999999999999999999
Q ss_pred cCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCC
Q 011005 284 MERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSS 363 (496)
Q Consensus 284 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 363 (496)
+. |++.+.+.... ..+++..+..++.|++.|+.||| +.+++|+||+|+||+++.++.++|+|||++.....
T Consensus 103 ~~-~~l~~~l~~~~--~~l~~~~~~~~~~qi~~al~~LH---~~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~--- 173 (313)
T cd06633 103 CL-GSASDLLEVHK--KPLQEVEIAAITHGALQGLAYLH---SHNMIHRDIKAGNILLTEPGQVKLADFGSASKSSP--- 173 (313)
T ss_pred CC-CCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCChhhEEECCCCCEEEeecCCCcccCC---
Confidence 96 57777775432 25889999999999999999999 77999999999999999999999999999864321
Q ss_pred Cccccccccccccccccc---cCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhH
Q 011005 364 NRTLLAGTYGYIAPELAY---TMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKV 440 (496)
Q Consensus 364 ~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 440 (496)
.....++..|+|||.+. ...++.++||||||+++|+|++|..||..... ............+.....
T Consensus 174 -~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~-------~~~~~~~~~~~~~~~~~~-- 243 (313)
T cd06633 174 -ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA-------MSALYHIAQNDSPTLQSN-- 243 (313)
T ss_pred -CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCh-------HHHHHHHHhcCCCCCCcc--
Confidence 22356888999999974 45678899999999999999999999853221 111111111111111111
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCCCCC
Q 011005 441 IRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTPLVK 482 (496)
Q Consensus 441 ~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~~~~ 482 (496)
.....+.+++.+||+.+|.+||++.++++|+|+....+...
T Consensus 244 -~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~~~~~~~~~~~~ 284 (313)
T cd06633 244 -EWTDSFRGFVDYCLQKIPQERPASAELLRHDFVRRDRPARV 284 (313)
T ss_pred -ccCHHHHHHHHHHccCChhhCcCHHHHhcCcccCCCchhHH
Confidence 11224678999999999999999999999999987655433
No 360
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=9.3e-37 Score=294.36 Aligned_cols=263 Identities=29% Similarity=0.367 Sum_probs=198.4
Q ss_pred HHHhCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchh-HHHHHHHHHHHHHHHhhcccccccccceeecCC----
Q 011005 202 EATEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEE-LAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKK---- 275 (496)
Q Consensus 202 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~---- 275 (496)
...++|++.+.||+|+||.||+|..+ +++.||+|.++.... ......+.+|++++++++|||++++++++....
T Consensus 4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~ 83 (302)
T cd07864 4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALD 83 (302)
T ss_pred hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhh
Confidence 35678999999999999999999775 588999999865432 222346678999999999999999999987654
Q ss_pred ------eEEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEE
Q 011005 276 ------CMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFV 349 (496)
Q Consensus 276 ------~~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl 349 (496)
..++|+||+++ ++...+... ...+++..+..++.|++.||+||| ..+++|+||+|+||++++++.+||
T Consensus 84 ~~~~~~~~~lv~e~~~~-~l~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH---~~~i~H~dl~p~nili~~~~~~kl 157 (302)
T cd07864 84 FKKDKGAFYLVFEYMDH-DLMGLLESG--LVHFSEDHIKSFMKQLLEGLNYCH---KKNFLHRDIKCSNILLNNKGQIKL 157 (302)
T ss_pred ccccCCcEEEEEcccCc-cHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCcEEe
Confidence 78999999986 676666643 236899999999999999999999 779999999999999999999999
Q ss_pred ccccccccccCCCC-Ccccccccccccccccccc-CCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhh
Q 011005 350 ADFGTARLLHADSS-NRTLLAGTYGYIAPELAYT-MVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDV 427 (496)
Q Consensus 350 ~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~ 427 (496)
+|||++........ ......++..|+|||.+.+ ..++.++||||+|+++|+|++|+.||........ -......
T Consensus 158 ~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~----~~~~~~~ 233 (302)
T cd07864 158 ADFGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQ----LELISRL 233 (302)
T ss_pred CcccccccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH----HHHHHHH
Confidence 99999987644332 1222345778999998765 4578899999999999999999999864321100 0000000
Q ss_pred hcCCCC----------------------CCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHH
Q 011005 428 LDQRLP----------------------PPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLI 474 (496)
Q Consensus 428 ~~~~~~----------------------~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~ 474 (496)
.....+ ..........+..+.+++.+||+.||++|||+.++++++|+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~ 302 (302)
T cd07864 234 CGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNSPWL 302 (302)
T ss_pred hCCCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhcCCCC
Confidence 000000 00000000113457899999999999999999999999874
No 361
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=1.3e-36 Score=291.60 Aligned_cols=258 Identities=26% Similarity=0.385 Sum_probs=201.4
Q ss_pred CCCCcceeeecCCeeEEEEEe----CCCcEEEEEEcccchh---HHHHHHHHHHHHHHHhh-cccccccccceeecCCeE
Q 011005 206 DFDIRYCIGTGGYGSVYKAQL----PNGKVFALKKLHTSEE---LAFIKSFKNEAQVLSQV-LHRNIVKLYGYCLHKKCM 277 (496)
Q Consensus 206 ~~~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~ 277 (496)
+|++.+.||+|+||.||+|.. .+|+.||+|.+..... ....+.+.+|+.+++++ +|+||+++++++..+...
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL 80 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence 477889999999999999975 3688999999875321 12335678899999999 599999999999999999
Q ss_pred EEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEcccccccc
Q 011005 278 FLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARL 357 (496)
Q Consensus 278 ~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 357 (496)
++||||+++++|.+++.... .+++..+..++.|++.||.||| ..+++||||+|+||+++.++.++|+|||++..
T Consensus 81 ~lv~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~al~~lH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~ 154 (290)
T cd05613 81 HLILDYINGGELFTHLSQRE---RFKEQEVQIYSGEIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSKE 154 (290)
T ss_pred EEEEecCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeEECCCCCEEEeeCcccee
Confidence 99999999999999987643 5788899999999999999999 78999999999999999999999999999976
Q ss_pred ccCCCCC-ccccccccccccccccccC--CcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCC
Q 011005 358 LHADSSN-RTLLAGTYGYIAPELAYTM--VMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPP 434 (496)
Q Consensus 358 ~~~~~~~-~~~~~gt~~y~aPE~~~~~--~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (496)
....... .....|+..|+|||.+.+. .++.++||||+|+++|+|++|+.||..... ................+.
T Consensus 155 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~---~~~~~~~~~~~~~~~~~~ 231 (290)
T cd05613 155 FHEDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGE---KNSQAEISRRILKSEPPY 231 (290)
T ss_pred cccccccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCc---cccHHHHHHHhhccCCCC
Confidence 5433211 2234578899999998753 467899999999999999999999863211 001111111111111111
Q ss_pred CCChhHHHHHHHHHHHHHhcccCCCCCCC-----CHHHHHHHHHHhcc
Q 011005 435 PVDRKVIRDILLISTVSFACLQSNPKSRP-----TMQSVSQEFLITRK 477 (496)
Q Consensus 435 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-----s~~evl~~~~~~~~ 477 (496)
+. .....+.+++.+||+.||++|| +.+++++|+|+.+.
T Consensus 232 ~~-----~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~ 274 (290)
T cd05613 232 PQ-----EMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKHPFFQKI 274 (290)
T ss_pred Cc-----cCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcCcccccC
Confidence 11 1123467899999999999997 89999999998664
No 362
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=100.00 E-value=8.7e-37 Score=291.51 Aligned_cols=262 Identities=26% Similarity=0.323 Sum_probs=201.0
Q ss_pred CCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccch-hHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEec
Q 011005 207 FDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSE-ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEYM 284 (496)
Q Consensus 207 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~~ 284 (496)
|+..+.||+|++|.||+|... +++.||+|.+.... .....+.+.+|+.++++++|+|++++++++......++|+||+
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYC 80 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCc
Confidence 566788999999999999765 58999999987653 2233456788999999999999999999999999999999999
Q ss_pred CCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCCC
Q 011005 285 ERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSN 364 (496)
Q Consensus 285 ~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 364 (496)
+ ++|.+++.... ..+++..+..++.|++.||.||| +.+++||||+|+||++++++.++|+|||.+.........
T Consensus 81 ~-~~l~~~i~~~~--~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~ 154 (282)
T cd07829 81 D-MDLKKYLDKRP--GPLSPNLIKSIMYQLLRGLAYCH---SHRILHRDLKPQNILINRDGVLKLADFGLARAFGIPLRT 154 (282)
T ss_pred C-cCHHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChheEEEcCCCCEEEecCCcccccCCCccc
Confidence 7 58999988653 26899999999999999999999 779999999999999999999999999999876544333
Q ss_pred ccccccccccccccccccC-CcCcccchhhHHHHHHHHHhCCCCCccccccCC---------CCCCcch--hHhh--hcC
Q 011005 365 RTLLAGTYGYIAPELAYTM-VMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSS---------SSDPKIM--LIDV--LDQ 430 (496)
Q Consensus 365 ~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~---------~~~~~~~--~~~~--~~~ 430 (496)
.....++..|+|||.+.+. .++.++||||+|+++||+++|+.||........ ....... .... ...
T Consensus 155 ~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (282)
T cd07829 155 YTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKP 234 (282)
T ss_pred cCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhcccccccc
Confidence 3334567789999998776 788999999999999999999999853221000 0000000 0000 000
Q ss_pred CCCC----CCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHH
Q 011005 431 RLPP----PVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLI 474 (496)
Q Consensus 431 ~~~~----~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~ 474 (496)
..+. ............+.+++.+||+.||++||++.+++.|+|+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~p~~ 282 (282)
T cd07829 235 TFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKHPYF 282 (282)
T ss_pred cccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhhCcCC
Confidence 0000 0000000113357899999999999999999999999985
No 363
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-37 Score=303.89 Aligned_cols=203 Identities=31% Similarity=0.454 Sum_probs=178.3
Q ss_pred CCCcceeeecCCeeEEEEE-eCCCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCC------eEEE
Q 011005 207 FDIRYCIGTGGYGSVYKAQ-LPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKK------CMFL 279 (496)
Q Consensus 207 ~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~------~~~l 279 (496)
+...+.||+|+||.||+|+ .+.|+.||||.++........+...+|++++++++|+|||++++.-+... ...+
T Consensus 15 W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vl 94 (732)
T KOG4250|consen 15 WEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVL 94 (732)
T ss_pred eeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceE
Confidence 4456779999999999998 45799999999988665556678899999999999999999998776544 5789
Q ss_pred EEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEec--CCCC--eEEcccccc
Q 011005 280 IYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLN--SKLE--AFVADFGTA 355 (496)
Q Consensus 280 V~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~--~~~~--~kl~Dfg~~ 355 (496)
|||||.||+|+..+.+-+....+++.+.+.++.+++.||.||| .+||+||||||.||++- .+|+ -||+|||+|
T Consensus 95 vmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~Lr---En~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~A 171 (732)
T KOG4250|consen 95 VMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLR---ENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAA 171 (732)
T ss_pred EEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHH---HcCceeccCCCCcEEEeecCCCceEEeeeccccc
Confidence 9999999999999998887788999999999999999999999 78999999999999984 3333 699999999
Q ss_pred ccccCCCCCccccccccccccccccc-cCCcCcccchhhHHHHHHHHHhCCCCCccccc
Q 011005 356 RLLHADSSNRTLLAGTYGYIAPELAY-TMVMTEKCDVYSFGVVTLEVLMGKHPRDILSS 413 (496)
Q Consensus 356 ~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DvwslG~il~el~~g~~p~~~~~~ 413 (496)
+...++. .....+||..|.+||... .+.|+..+|.|||||++|+++||..||.+...
T Consensus 172 rel~d~s-~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~ 229 (732)
T KOG4250|consen 172 RELDDNS-LFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGG 229 (732)
T ss_pred ccCCCCC-eeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCC
Confidence 9886544 566789999999999998 58899999999999999999999999975543
No 364
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00 E-value=1.7e-36 Score=297.51 Aligned_cols=268 Identities=25% Similarity=0.304 Sum_probs=201.4
Q ss_pred HHHhCCCCcceeeecCCeeEEEEEe-CCCcEEEEEEcccch-hHHHHHHHHHHHHHHHhhcccccccccceeecCC----
Q 011005 202 EATEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSE-ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKK---- 275 (496)
Q Consensus 202 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~---- 275 (496)
...++|++.+.||+|+||.||+|.. .+++.||+|.+.... .......+.+|+.++++++|+||+++++++....
T Consensus 12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07880 12 EVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDR 91 (343)
T ss_pred ccccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccc
Confidence 3567899999999999999999964 478999999986532 2233456789999999999999999999887643
Q ss_pred --eEEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEcccc
Q 011005 276 --CMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFG 353 (496)
Q Consensus 276 --~~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg 353 (496)
..++||||+ +++|.+++... .+++..+..++.|++.||+||| ..+++||||||+||+++.++.++++|||
T Consensus 92 ~~~~~lv~e~~-~~~l~~~~~~~----~l~~~~~~~i~~qi~~al~~LH---~~gi~H~dlkp~Nill~~~~~~kl~dfg 163 (343)
T cd07880 92 FHDFYLVMPFM-GTDLGKLMKHE----KLSEDRIQFLVYQMLKGLKYIH---AAGIIHRDLKPGNLAVNEDCELKILDFG 163 (343)
T ss_pred cceEEEEEecC-CCCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeecc
Confidence 468999998 77888877642 5889999999999999999999 7899999999999999999999999999
Q ss_pred ccccccCCCCCcccccccccccccccccc-CCcCcccchhhHHHHHHHHHhCCCCCccccccCC-------CCCCcchhH
Q 011005 354 TARLLHADSSNRTLLAGTYGYIAPELAYT-MVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSS-------SSDPKIMLI 425 (496)
Q Consensus 354 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~-------~~~~~~~~~ 425 (496)
++...... .....+++.|+|||.+.+ ..++.++|+||+|+++|++++|+.||........ .........
T Consensus 164 ~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 240 (343)
T cd07880 164 LARQTDSE---MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFV 240 (343)
T ss_pred cccccccC---ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHH
Confidence 99765322 223457889999998876 4578899999999999999999999863321000 000000000
Q ss_pred hhh--------cCCCCCCCCh----hHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCCC
Q 011005 426 DVL--------DQRLPPPVDR----KVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTPL 480 (496)
Q Consensus 426 ~~~--------~~~~~~~~~~----~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~~ 480 (496)
..+ ...++..... ........+.+++.+|++.||++|||+.++++|+|+......
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~~~~~~~~~ 307 (343)
T cd07880 241 QKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHPYFEEFHDP 307 (343)
T ss_pred HhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcCccHhhhcCc
Confidence 000 0000000000 000112247799999999999999999999999999875443
No 365
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=5.6e-36 Score=284.60 Aligned_cols=253 Identities=26% Similarity=0.419 Sum_probs=194.2
Q ss_pred CCCcceeeecCCeeEEEEEeC----CCcEEEEEEcccch-hHHHHHHHHHHHHHHHhhcccccccccceeecCC------
Q 011005 207 FDIRYCIGTGGYGSVYKAQLP----NGKVFALKKLHTSE-ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKK------ 275 (496)
Q Consensus 207 ~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~------ 275 (496)
|.+.+.||+|+||.||+|.+. +++.||+|.+.... .....+.+.+|+.++++++||||+++++++....
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 567788999999999999653 46889999987643 2233567889999999999999999999886532
Q ss_pred eEEEEEEecCCCChhhhhhCCC---CCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccc
Q 011005 276 CMFLIYEYMERGSLFCNLHNNE---DAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADF 352 (496)
Q Consensus 276 ~~~lV~e~~~~g~L~~~l~~~~---~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Df 352 (496)
..+++++|+.+|+|..++.... ....+++..+..++.|++.||+||| +.+++||||||+||+++.++.++++||
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~nili~~~~~~kl~df 157 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLS---SKNFIHRDLAARNCMLNENMTVCVADF 157 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCEeecccchhhEEEcCCCCEEECcc
Confidence 2478899999999988765321 2235788999999999999999999 779999999999999999999999999
Q ss_pred cccccccCCCC--CccccccccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccCCCCCCcchhHhhhc
Q 011005 353 GTARLLHADSS--NRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSSDPKIMLIDVLD 429 (496)
Q Consensus 353 g~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~ 429 (496)
|+++....... ......+++.|++||.+.+..++.++||||||+++|+|++ |+.||..... .........
T Consensus 158 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~-------~~~~~~~~~ 230 (273)
T cd05074 158 GLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVEN-------SEIYNYLIK 230 (273)
T ss_pred cccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCH-------HHHHHHHHc
Confidence 99986643221 1122345678999999999899999999999999999999 8888753211 111111111
Q ss_pred C-CCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHH
Q 011005 430 Q-RLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLI 474 (496)
Q Consensus 430 ~-~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~ 474 (496)
. ....+. .....+.+++.+||+.+|++|||+.|+++.+..
T Consensus 231 ~~~~~~~~-----~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~ 271 (273)
T cd05074 231 GNRLKQPP-----DCLEDVYELMCQCWSPEPKCRPSFQHLRDQLEL 271 (273)
T ss_pred CCcCCCCC-----CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHh
Confidence 1 111111 112357899999999999999999999998753
No 366
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=100.00 E-value=1e-36 Score=295.36 Aligned_cols=265 Identities=25% Similarity=0.318 Sum_probs=194.6
Q ss_pred HhCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchhH-HHHHHHHHHHHHHHhhcccccccccceeecC-------
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEEL-AFIKSFKNEAQVLSQVLHRNIVKLYGYCLHK------- 274 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~------- 274 (496)
.++|++.+.||+|+||.||+|..+ +++.+|+|.+...... .....+.+|++++++++|+||+++++++...
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence 468999999999999999999764 6889999988653321 1224567899999999999999999987543
Q ss_pred -CeEEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEcccc
Q 011005 275 -KCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFG 353 (496)
Q Consensus 275 -~~~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg 353 (496)
...++|+||+.+ ++...+.... ..+++..+..++.|+++||+||| +.+++|+||||+||++++++.++|+|||
T Consensus 87 ~~~~~lv~~~~~~-~l~~~~~~~~--~~~~~~~~~~i~~~l~~al~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg 160 (311)
T cd07866 87 RGSVYMVTPYMDH-DLSGLLENPS--VKLTESQIKCYMLQLLEGINYLH---ENHILHRDIKAANILIDNQGILKIADFG 160 (311)
T ss_pred CceEEEEEecCCc-CHHHHHhccc--cCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEECcCc
Confidence 346999999975 6766665432 36899999999999999999999 7899999999999999999999999999
Q ss_pred ccccccCCCCC-----------ccccccccccccccccccC-CcCcccchhhHHHHHHHHHhCCCCCccccccCC-----
Q 011005 354 TARLLHADSSN-----------RTLLAGTYGYIAPELAYTM-VMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSS----- 416 (496)
Q Consensus 354 ~~~~~~~~~~~-----------~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~----- 416 (496)
++......... .....+++.|+|||.+.+. .++.++||||+|+++|+|++|++||........
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~ 240 (311)
T cd07866 161 LARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIF 240 (311)
T ss_pred cchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 99765432211 1223567889999987654 578899999999999999999999863322100
Q ss_pred ----CCCCcchh-----Hh----hhcCCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHH
Q 011005 417 ----SSDPKIML-----ID----VLDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLI 474 (496)
Q Consensus 417 ----~~~~~~~~-----~~----~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~ 474 (496)
...+.... .. ......+.............+.+++.+||+.||++|||+.|++.|+|+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~~~f 311 (311)
T cd07866 241 KLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEHPYF 311 (311)
T ss_pred HHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhcCCCC
Confidence 00000000 00 000000000000001111357899999999999999999999999885
No 367
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4e-38 Score=326.27 Aligned_cols=261 Identities=29% Similarity=0.380 Sum_probs=207.2
Q ss_pred HhCCCCcceeeecCCeeEEEEE-eCCCcEEEEEEcccchh-HHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEE
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQ-LPNGKVFALKKLHTSEE-LAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIY 281 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~ 281 (496)
+-+++-...||.|.||.||.|. ..+|...|+|-++.... ....+...+|..++..++|||+|+++|+-.+.+..+|.|
T Consensus 1234 ~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFM 1313 (1509)
T KOG4645|consen 1234 TFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFM 1313 (1509)
T ss_pred eeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHHH
Confidence 3467778889999999999995 56799999998876432 334566789999999999999999999999999999999
Q ss_pred EecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCC
Q 011005 282 EYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHAD 361 (496)
Q Consensus 282 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 361 (496)
|||++|+|.+.+.... -.++.....+..|++.|++||| +.|||||||||.||+++.+|.+|++|||.|..+...
T Consensus 1314 EyC~~GsLa~ll~~gr---i~dE~vt~vyt~qll~gla~LH---~~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~ 1387 (1509)
T KOG4645|consen 1314 EYCEGGSLASLLEHGR---IEDEMVTRVYTKQLLEGLAYLH---EHGIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNN 1387 (1509)
T ss_pred HHhccCcHHHHHHhcc---hhhhhHHHHHHHHHHHHHHHHH---hcCceecCCCccceeeecCCcEEeecccceeEecCc
Confidence 9999999999997653 3556666778899999999999 789999999999999999999999999999988654
Q ss_pred CCC----ccccccccccccccccccCC---cCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCC
Q 011005 362 SSN----RTLLAGTYGYIAPELAYTMV---MTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPP 434 (496)
Q Consensus 362 ~~~----~~~~~gt~~y~aPE~~~~~~---~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (496)
... ....+||+.|||||++.+.. ...++||||+||+..||+||+.||..+.. .-..+..........-
T Consensus 1388 ~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dn-----e~aIMy~V~~gh~Pq~ 1462 (1509)
T KOG4645|consen 1388 AQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDN-----EWAIMYHVAAGHKPQI 1462 (1509)
T ss_pred hhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccc-----hhHHHhHHhccCCCCC
Confidence 321 23467999999999998654 45689999999999999999999974321 1112222222222222
Q ss_pred CCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCCC
Q 011005 435 PVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTPL 480 (496)
Q Consensus 435 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~~ 480 (496)
|.. ....-.+++..||..||++|.++.|+++|-|-......
T Consensus 1463 P~~-----ls~~g~dFle~Cl~~dP~~Rw~~~qlle~~f~~~~~d~ 1503 (1509)
T KOG4645|consen 1463 PER-----LSSEGRDFLEHCLEQDPKMRWTASQLLEHAFGKSCTDE 1503 (1509)
T ss_pred chh-----hhHhHHHHHHHHHhcCchhhhHHHHHHHhhcccccccc
Confidence 211 12234588999999999999999999999876555433
No 368
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=100.00 E-value=2.3e-36 Score=296.62 Aligned_cols=269 Identities=22% Similarity=0.265 Sum_probs=203.0
Q ss_pred HHhCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccch-hHHHHHHHHHHHHHHHhhcccccccccceeecCCe----
Q 011005 203 ATEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSE-ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKC---- 276 (496)
Q Consensus 203 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~---- 276 (496)
..++|++.+.||+|++|.||+|... +++.||+|++.... .....+.+.+|+.+++.++|+|++++++++...+.
T Consensus 13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07851 13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDF 92 (343)
T ss_pred ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccc
Confidence 4678999999999999999999765 57899999986532 22334567789999999999999999998876554
Q ss_pred --EEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccc
Q 011005 277 --MFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGT 354 (496)
Q Consensus 277 --~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~ 354 (496)
.++|+||+ +++|.+++... .+++..+..++.|++.||+||| +.|++||||+|+||+++.++.++|+|||+
T Consensus 93 ~~~~lv~e~~-~~~L~~~~~~~----~l~~~~~~~~~~ql~~aL~~LH---~~gi~H~dlkp~Nill~~~~~~kL~dfg~ 164 (343)
T cd07851 93 QDVYLVTHLM-GADLNNIVKCQ----KLSDDHIQFLVYQILRGLKYIH---SAGIIHRDLKPSNIAVNEDCELKILDFGL 164 (343)
T ss_pred ccEEEEEecC-CCCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCCEEEccccc
Confidence 89999998 66998888752 6899999999999999999999 78999999999999999999999999999
Q ss_pred cccccCCCCCcccccccccccccccccc-CCcCcccchhhHHHHHHHHHhCCCCCccccccCC--------CCCCcch--
Q 011005 355 ARLLHADSSNRTLLAGTYGYIAPELAYT-MVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSS--------SSDPKIM-- 423 (496)
Q Consensus 355 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~--------~~~~~~~-- 423 (496)
+...... .....++..|+|||.+.+ ..++.++||||+|+++|++++|+.||........ .......
T Consensus 165 ~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 241 (343)
T cd07851 165 ARHTDDE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQ 241 (343)
T ss_pred ccccccc---ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHh
Confidence 9765332 233467889999998865 3678899999999999999999999853221000 0000000
Q ss_pred ------hHhhhcCCC---CCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCCCCC
Q 011005 424 ------LIDVLDQRL---PPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTPLVK 482 (496)
Q Consensus 424 ------~~~~~~~~~---~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~~~~ 482 (496)
....+.... ..............+.+++.+||+.||++|||+.|+++|+|+........
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h~~~~~~~~~~~ 309 (343)
T cd07851 242 KISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAHPYLAEYHDPED 309 (343)
T ss_pred hccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcCCCccccCCCcc
Confidence 000000000 00000000011345789999999999999999999999999987655543
No 369
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.2e-37 Score=298.71 Aligned_cols=244 Identities=24% Similarity=0.320 Sum_probs=199.9
Q ss_pred HHhCCCCcceeeecCCeeEEEEEe-CCCcEEEEEEcccchhHHHHHHHHHHHHHHHhh-cccccccccceeecCCeEEEE
Q 011005 203 ATEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSEELAFIKSFKNEAQVLSQV-LHRNIVKLYGYCLHKKCMFLI 280 (496)
Q Consensus 203 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lV 280 (496)
+++.|.+...+|.|+|+.|-.+.+ .+++..++|++.... ....+|+.++.+. +||||+++.+.+.++.+.|+|
T Consensus 320 ~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~-----~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v 394 (612)
T KOG0603|consen 320 FTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA-----DDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLV 394 (612)
T ss_pred cchhhccccccCCCCccceeeeeccccccchhheeccccc-----cccccccchhhhhcCCCcceeecceecCCceeeee
Confidence 467888999999999999999954 568889999997762 2345678777777 699999999999999999999
Q ss_pred EEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEe-cCCCCeEEcccccccccc
Q 011005 281 YEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILL-NSKLEAFVADFGTARLLH 359 (496)
Q Consensus 281 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~-~~~~~~kl~Dfg~~~~~~ 359 (496)
||.+.|+-+.+.+.... .+. .++..|+.+|+.|+.||| .+|++|||+||+|||+ +..++++|+|||.++...
T Consensus 395 ~e~l~g~ell~ri~~~~---~~~-~e~~~w~~~lv~Av~~LH---~~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~ 467 (612)
T KOG0603|consen 395 MELLDGGELLRRIRSKP---EFC-SEASQWAAELVSAVDYLH---EQGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELE 467 (612)
T ss_pred ehhccccHHHHHHHhcc---hhH-HHHHHHHHHHHHHHHHHH---hcCeeecCCChhheeecCCCCcEEEEEechhhhCc
Confidence 99999998888877654 333 677789999999999999 7899999999999999 688999999999998775
Q ss_pred CCCCCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChh
Q 011005 360 ADSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRK 439 (496)
Q Consensus 360 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 439 (496)
.+ ....+-|..|.|||++....|++++|+||||++||+|++|+.||..... . .++......+..+.
T Consensus 468 ~~---~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~-------~---~ei~~~i~~~~~s~- 533 (612)
T KOG0603|consen 468 RS---CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPA-------G---IEIHTRIQMPKFSE- 533 (612)
T ss_pred hh---hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCc-------h---HHHHHhhcCCcccc-
Confidence 54 3345678899999999999999999999999999999999999973211 1 22222222222221
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHH
Q 011005 440 VIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLI 474 (496)
Q Consensus 440 ~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~ 474 (496)
.......+|+.+||+.||.+||++.++..|+|+
T Consensus 534 --~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h~w~ 566 (612)
T KOG0603|consen 534 --CVSDEAKDLLQQLLQVDPALRLGADEIGAHPWF 566 (612)
T ss_pred --ccCHHHHHHHHHhccCChhhCcChhhhccCcch
Confidence 122246789999999999999999999999999
No 370
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00 E-value=2.7e-36 Score=289.09 Aligned_cols=257 Identities=26% Similarity=0.377 Sum_probs=198.3
Q ss_pred CCCCcceeeecCCeeEEEEEe----CCCcEEEEEEcccch---hHHHHHHHHHHHHHHHhh-cccccccccceeecCCeE
Q 011005 206 DFDIRYCIGTGGYGSVYKAQL----PNGKVFALKKLHTSE---ELAFIKSFKNEAQVLSQV-LHRNIVKLYGYCLHKKCM 277 (496)
Q Consensus 206 ~~~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~---~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~ 277 (496)
+|++.+.||+|+||.||++.. .+++.||+|.++... .....+.+.+|++++.++ +|+||+++++.+..+...
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~ 80 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL 80 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence 477889999999999999964 357889999987532 123345678999999999 599999999999999999
Q ss_pred EEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEcccccccc
Q 011005 278 FLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARL 357 (496)
Q Consensus 278 ~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 357 (496)
++||||+++|+|.+.+.... .+++..+..++.|+++||.||| ..+++||||+|+||+++.++.++|+|||++..
T Consensus 81 ~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~ql~~~l~~lH---~~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~ 154 (288)
T cd05583 81 HLILDYVNGGELFTHLYQRE---HFTESEVRVYIAEIVLALDHLH---QLGIIYRDIKLENILLDSEGHVVLTDFGLSKE 154 (288)
T ss_pred EEEEecCCCCcHHHHHhhcC---CcCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHeEECCCCCEEEEECccccc
Confidence 99999999999999887543 5788999999999999999999 78999999999999999999999999999876
Q ss_pred ccCCCCC-ccccccccccccccccccCC--cCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCC
Q 011005 358 LHADSSN-RTLLAGTYGYIAPELAYTMV--MTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPP 434 (496)
Q Consensus 358 ~~~~~~~-~~~~~gt~~y~aPE~~~~~~--~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (496)
....... .....++..|+|||.+.+.. .+.++||||+|+++|+|++|..||...... ...............+.
T Consensus 155 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~---~~~~~~~~~~~~~~~~~ 231 (288)
T cd05583 155 FLAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQ---NSQSEISRRILKSKPPF 231 (288)
T ss_pred cccccccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCccc---chHHHHHHHHHccCCCC
Confidence 5433221 22345788999999987765 788999999999999999999998632210 01111111122221111
Q ss_pred CCChhHHHHHHHHHHHHHhcccCCCCCCCCH---HHHHHHHHHhc
Q 011005 435 PVDRKVIRDILLISTVSFACLQSNPKSRPTM---QSVSQEFLITR 476 (496)
Q Consensus 435 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~---~evl~~~~~~~ 476 (496)
+. .....+.+++.+||+.||++|||+ .++++|+|+..
T Consensus 232 ~~-----~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~~~~~ 271 (288)
T cd05583 232 PK-----TMSAEARDFIQKLLEKDPKKRLGANGADEIKNHPFFQG 271 (288)
T ss_pred Cc-----ccCHHHHHHHHHHhcCCHhhccCcchHHHHhcCccccc
Confidence 11 112246789999999999999995 55577776543
No 371
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=100.00 E-value=2.1e-36 Score=296.80 Aligned_cols=265 Identities=22% Similarity=0.247 Sum_probs=195.4
Q ss_pred HhCCCCcceeeecCCeeEEEEEe-CCCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecC--------
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHK-------- 274 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~-------- 274 (496)
..+|.+.+.||.|+||.||+|.. .+++.||+|++..... ...+.+.+|++++++++||||+++++++...
T Consensus 4 ~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~-~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 82 (342)
T cd07854 4 GSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDP-QSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDV 82 (342)
T ss_pred CcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCC-chHHHHHHHHHHHHhcCCCcchhhHhhhccccccccccc
Confidence 36799999999999999999965 4688999999866543 3346688999999999999999999876553
Q ss_pred ------CeEEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecC-CCCe
Q 011005 275 ------KCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNS-KLEA 347 (496)
Q Consensus 275 ------~~~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~-~~~~ 347 (496)
...++||||++ ++|.+.+... .+++..+..++.||+.||.||| ..+++||||||+||+++. ++.+
T Consensus 83 ~~~~~~~~~~lv~e~~~-~~L~~~~~~~----~l~~~~~~~~~~qi~~aL~~LH---~~givH~dikp~Nili~~~~~~~ 154 (342)
T cd07854 83 GSLTELNSVYIVQEYME-TDLANVLEQG----PLSEEHARLFMYQLLRGLKYIH---SANVLHRDLKPANVFINTEDLVL 154 (342)
T ss_pred ccccccceEEEEeeccc-ccHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEcCCCceE
Confidence 35789999997 5888777542 5789999999999999999999 779999999999999974 5678
Q ss_pred EEccccccccccCCCC---Ccccccccccccccccccc-CCcCcccchhhHHHHHHHHHhCCCCCccccccCC-------
Q 011005 348 FVADFGTARLLHADSS---NRTLLAGTYGYIAPELAYT-MVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSS------- 416 (496)
Q Consensus 348 kl~Dfg~~~~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~------- 416 (496)
+++|||.+........ ......++..|+|||.+.+ ..++.++|||||||++|+|++|+.||........
T Consensus 155 kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~ 234 (342)
T cd07854 155 KIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILES 234 (342)
T ss_pred EECCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHh
Confidence 9999999976533211 1122357889999998654 5678899999999999999999999963321100
Q ss_pred CCCCcc-hhH-------hhhc--CCCC-CCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhcc
Q 011005 417 SSDPKI-MLI-------DVLD--QRLP-PPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRK 477 (496)
Q Consensus 417 ~~~~~~-~~~-------~~~~--~~~~-~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~ 477 (496)
...... ... .... .... .+...........+.+++.+||+.||++|||+.|+++|+|+...
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h~~~~~~ 306 (342)
T cd07854 235 VPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMHPYMSCY 306 (342)
T ss_pred cCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCCCccccc
Confidence 000000 000 0000 0000 00000000112346789999999999999999999999999743
No 372
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-38 Score=275.71 Aligned_cols=262 Identities=24% Similarity=0.289 Sum_probs=200.4
Q ss_pred cceeeecCCeeEEEEEe-CCCcEEEEEEcccchhHHHHHHHHHHHHHHHhh-cccccccccceeecCCeEEEEEEecCCC
Q 011005 210 RYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSEELAFIKSFKNEAQVLSQV-LHRNIVKLYGYCLHKKCMFLIYEYMERG 287 (496)
Q Consensus 210 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lV~e~~~~g 287 (496)
...||.|+||+|+|..+ +.|+..|||+++......+.+++..|.+...+- ++||||++||.+..++..|+.||.|+-
T Consensus 69 lg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELMd~- 147 (361)
T KOG1006|consen 69 LGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELMDI- 147 (361)
T ss_pred HHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHHhh-
Confidence 34599999999999965 479999999999877666678888888877666 699999999999999999999999953
Q ss_pred ChhhhhhC--CCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCCCc
Q 011005 288 SLFCNLHN--NEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNR 365 (496)
Q Consensus 288 ~L~~~l~~--~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 365 (496)
|+..+-.. .-....+++.-.-+|....+.||.||.. ...|+|||+||+|||++..|.+||||||.+-.+... ...
T Consensus 148 SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~--~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~S-iAk 224 (361)
T KOG1006|consen 148 SLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKE--ELKIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDS-IAK 224 (361)
T ss_pred hHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHH--HhhhhhccCChhheEEecCCCEeeecccchHhHHHH-HHh
Confidence 66433221 1122367888777888889999999997 568999999999999999999999999999766433 223
Q ss_pred ccccccccccccccccc--CCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCC-hhHHH
Q 011005 366 TLLAGTYGYIAPELAYT--MVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVD-RKVIR 442 (496)
Q Consensus 366 ~~~~gt~~y~aPE~~~~--~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 442 (496)
+..+|-..|||||.+.. ..|+.+|||||+|++|||+.||+.|++.-. ........+..+..+--.. .....
T Consensus 225 T~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~------svfeql~~Vv~gdpp~l~~~~~~~~ 298 (361)
T KOG1006|consen 225 TVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWD------SVFEQLCQVVIGDPPILLFDKECVH 298 (361)
T ss_pred hhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHH------HHHHHHHHHHcCCCCeecCcccccc
Confidence 34467778999999864 358899999999999999999999986321 1112222222222221111 11223
Q ss_pred HHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCCCC
Q 011005 443 DILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTPLV 481 (496)
Q Consensus 443 ~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~~~ 481 (496)
....+..++.-|+.+|-..||++.++.+++|........
T Consensus 299 ~s~~~~~fintCl~Kd~~~Rpky~~Lk~~~fyr~y~~~~ 337 (361)
T KOG1006|consen 299 YSFSMVRFINTCLIKDRSDRPKYDDLKKFPFYRMYAVEG 337 (361)
T ss_pred cCHHHHHHHHHHhhcccccCcchhhhhcCchhhhhhhcC
Confidence 445688999999999999999999999999988775543
No 373
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-37 Score=295.13 Aligned_cols=266 Identities=21% Similarity=0.271 Sum_probs=211.9
Q ss_pred HhCCCC--cceeeecCCeeEEEEEe-CCCcEEEEEEcccch-hHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEE
Q 011005 204 TEDFDI--RYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSE-ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFL 279 (496)
Q Consensus 204 ~~~~~~--~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 279 (496)
..-|++ .+.||.|.||+||-|.+ ++|+.||||++.+.. .......+.+|+.+++.+.||+||.+...|+..+..++
T Consensus 561 stvYQif~devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFV 640 (888)
T KOG4236|consen 561 STVYQIFADEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFV 640 (888)
T ss_pred HHHHHhhhHhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEE
Confidence 333444 56899999999999954 689999999986632 22233678999999999999999999999999999999
Q ss_pred EEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCC---CCeEEccccccc
Q 011005 280 IYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSK---LEAFVADFGTAR 356 (496)
Q Consensus 280 V~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~---~~~kl~Dfg~~~ 356 (496)
|||.+.| ++.+++-..+ ..++++....-++.||+.||.||| -++|+|+||||+|||+... -++||||||+|+
T Consensus 641 VMEKl~G-DMLEMILSsE-kgRL~er~TkFlvtQIL~ALr~LH---~knIvHCDLKPENVLLas~~~FPQvKlCDFGfAR 715 (888)
T KOG4236|consen 641 VMEKLHG-DMLEMILSSE-KGRLPERITKFLVTQILVALRYLH---FKNIVHCDLKPENVLLASASPFPQVKLCDFGFAR 715 (888)
T ss_pred Eehhhcc-hHHHHHHHhh-cccchHHHHHHHHHHHHHHHHHhh---hcceeeccCCchheeeccCCCCCceeecccccee
Confidence 9999965 5555554433 337888888889999999999999 7899999999999999654 469999999999
Q ss_pred cccCCCCCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCC
Q 011005 357 LLHADSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPV 436 (496)
Q Consensus 357 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (496)
.+..... ....+|||.|+|||++..+.|...-|+||.|+|+|--++|..||.. ++.+.+-+...-..-.
T Consensus 716 iIgEksF-RrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNE----------dEdIndQIQNAaFMyP 784 (888)
T KOG4236|consen 716 IIGEKSF-RRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNE----------DEDINDQIQNAAFMYP 784 (888)
T ss_pred ecchhhh-hhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCC----------ccchhHHhhccccccC
Confidence 8865443 4457899999999999999999999999999999999999999963 2222222222211111
Q ss_pred ChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCCCCCccc
Q 011005 437 DRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTPLVKHAA 485 (496)
Q Consensus 437 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~~~~~~~ 485 (496)
...+........+||...|+..-++|-|.+..+.|+|.+.++-+.+-+.
T Consensus 785 p~PW~eis~~AidlIn~LLqVkm~kRysvdk~lsh~Wlq~yq~w~DLRe 833 (888)
T KOG4236|consen 785 PNPWSEISPEAIDLINNLLQVKMRKRYSVDKSLSHPWLQDYQTWLDLRE 833 (888)
T ss_pred CCchhhcCHHHHHHHHHHHHHHHHHhcchHhhccchhhhcchHHHHHHH
Confidence 2234444455779999999999999999999999999998876655443
No 374
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-37 Score=283.43 Aligned_cols=267 Identities=22% Similarity=0.327 Sum_probs=205.8
Q ss_pred HHhCCCCcceeeecCCeeEEEEEe-CCCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcc--c----ccccccceeecCC
Q 011005 203 ATEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLH--R----NIVKLYGYCLHKK 275 (496)
Q Consensus 203 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h--~----niv~~~~~~~~~~ 275 (496)
.+++|.+...+|+|.||.|-.+.+ +.+..||+|+++.-.. +.+..+-|+++++++.+ | -+|++.+||...+
T Consensus 87 l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~k--YreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrg 164 (415)
T KOG0671|consen 87 LTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVDK--YREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRG 164 (415)
T ss_pred cccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHHH--HhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccC
Confidence 478999999999999999999954 4578999999876542 34566789999999952 2 3788899999999
Q ss_pred eEEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecC------------
Q 011005 276 CMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNS------------ 343 (496)
Q Consensus 276 ~~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~------------ 343 (496)
+.++|+|.+ |-|+++.+..+. ...++...++.|++|+++++++|| +.+++|.||||+|||+.+
T Consensus 165 hiCivfell-G~S~~dFlk~N~-y~~fpi~~ir~m~~QL~~sv~fLh---~~kl~HTDLKPENILfvss~~~~~~~~k~~ 239 (415)
T KOG0671|consen 165 HICIVFELL-GLSTFDFLKENN-YIPFPIDHIRHMGYQLLESVAFLH---DLKLTHTDLKPENILFVSSEYFKTYNPKKK 239 (415)
T ss_pred ceEEEEecc-ChhHHHHhccCC-ccccchHHHHHHHHHHHHHHHHHH---hcceeecCCChheEEEeccceEEEeccCCc
Confidence 999999988 669999998754 347999999999999999999999 889999999999999932
Q ss_pred --------CCCeEEccccccccccCCCCCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccC
Q 011005 344 --------KLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLS 415 (496)
Q Consensus 344 --------~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~ 415 (496)
+..++++|||.|+.-... ....+.|..|+|||++.+-.++.++||||+||||+|+.||..-|+.-....
T Consensus 240 ~~~~r~~ks~~I~vIDFGsAtf~~e~---hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~E 316 (415)
T KOG0671|consen 240 VCFIRPLKSTAIKVIDFGSATFDHEH---HSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHENLE 316 (415)
T ss_pred cceeccCCCcceEEEecCCcceeccC---cceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCcHH
Confidence 345899999999865433 356788999999999999999999999999999999999999886432110
Q ss_pred --------CCCCCcchhHhh------hcCCCC-----------------CCCC---hhHHHHHHHHHHHHHhcccCCCCC
Q 011005 416 --------SSSDPKIMLIDV------LDQRLP-----------------PPVD---RKVIRDILLISTVSFACLQSNPKS 461 (496)
Q Consensus 416 --------~~~~~~~~~~~~------~~~~~~-----------------~~~~---~~~~~~~~~l~~li~~cl~~dP~~ 461 (496)
..+.+..++... ...++. .+.. .....+...+.+|+++||..||.+
T Consensus 317 HLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~ 396 (415)
T KOG0671|consen 317 HLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPAR 396 (415)
T ss_pred HHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccc
Confidence 001111111100 000111 0000 001122345899999999999999
Q ss_pred CCCHHHHHHHHHHhccCC
Q 011005 462 RPTMQSVSQEFLITRKTP 479 (496)
Q Consensus 462 Rps~~evl~~~~~~~~~~ 479 (496)
|+|+.|++.|+|+.+-.+
T Consensus 397 RiTl~EAL~HpFF~~~~~ 414 (415)
T KOG0671|consen 397 RITLREALSHPFFARLTP 414 (415)
T ss_pred cccHHHHhcCHHhhcCCC
Confidence 999999999999987643
No 375
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-36 Score=250.77 Aligned_cols=266 Identities=22% Similarity=0.281 Sum_probs=201.7
Q ss_pred CCCCcceeeecCCeeEEEEEe-CCCcEEEEEEcccchh-HHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEe
Q 011005 206 DFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSEE-LAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEY 283 (496)
Q Consensus 206 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~ 283 (496)
+|...++||+|.||+||||+. ..++.||+|.++-+++ +..-....+|+.+++.++|+|||++++....++.+.+|+||
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~ 82 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEF 82 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHH
Confidence 355567899999999999964 4688999999987553 23345678999999999999999999999999999999999
Q ss_pred cCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCC
Q 011005 284 MERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSS 363 (496)
Q Consensus 284 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 363 (496)
|.. +|..+..... ..++.+.+.+++.|+++||.++| ++.+.|||+||.|.+++.+|+.|++|||+++-+.-+-.
T Consensus 83 cdq-dlkkyfdsln--g~~d~~~~rsfmlqllrgl~fch---shnvlhrdlkpqnllin~ngelkladfglarafgipvr 156 (292)
T KOG0662|consen 83 CDQ-DLKKYFDSLN--GDLDPEIVRSFMLQLLRGLGFCH---SHNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVR 156 (292)
T ss_pred hhH-HHHHHHHhcC--CcCCHHHHHHHHHHHHhhhhhhh---hhhhhhccCCcceEEeccCCcEEecccchhhhcCCceE
Confidence 964 7777776543 26888999999999999999999 78999999999999999999999999999998766555
Q ss_pred CccccccccccccccccccC-CcCcccchhhHHHHHHHHHhCCCC-Ccccccc----------C-CCCCCcchhHhhhcC
Q 011005 364 NRTLLAGTYGYIAPELAYTM-VMTEKCDVYSFGVVTLEVLMGKHP-RDILSSL----------S-SSSDPKIMLIDVLDQ 430 (496)
Q Consensus 364 ~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~el~~g~~p-~~~~~~~----------~-~~~~~~~~~~~~~~~ 430 (496)
..+..+-|.+|++|.++.+. -|+...|+||.|||+.|+.....| |...... . ...+........-+.
T Consensus 157 cysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpdy 236 (292)
T KOG0662|consen 157 CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPDY 236 (292)
T ss_pred eeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCCC
Confidence 56667789999999999886 578899999999999999874444 4322110 0 000011111111111
Q ss_pred CCCCC--CChhHHHHHH----HHHHHHHhcccCCCCCCCCHHHHHHHHHHhcc
Q 011005 431 RLPPP--VDRKVIRDIL----LISTVSFACLQSNPKSRPTMQSVSQEFLITRK 477 (496)
Q Consensus 431 ~~~~~--~~~~~~~~~~----~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~ 477 (496)
...+. ....+.+... .=.+++.+.+.-+|.+|.++++.++|+++..-
T Consensus 237 k~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalqhpyf~d~ 289 (292)
T KOG0662|consen 237 KPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQHPYFSDF 289 (292)
T ss_pred cccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcCcccccc
Confidence 11111 1111222222 23578888999999999999999999988654
No 376
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=100.00 E-value=9.1e-36 Score=314.45 Aligned_cols=146 Identities=29% Similarity=0.460 Sum_probs=130.9
Q ss_pred hCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccch--hHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEE
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIY 281 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~ 281 (496)
++|.+.+.||+|+||.||+|.+. +++.||+|+++... .......+.+|+.+++.++|+||+++++++......++||
T Consensus 4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVm 83 (669)
T cd05610 4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVM 83 (669)
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEE
Confidence 57899999999999999999765 68999999987543 2334467889999999999999999999999999999999
Q ss_pred EecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccc
Q 011005 282 EYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTAR 356 (496)
Q Consensus 282 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~ 356 (496)
||+.+++|.+++.... .+++..++.++.||+.||+||| ..+|+||||||+|||++.++.++|+|||+++
T Consensus 84 Ey~~g~~L~~li~~~~---~l~~~~~~~i~~qil~aL~yLH---~~gIiHrDLKP~NILl~~~g~vkL~DFGls~ 152 (669)
T cd05610 84 EYLIGGDVKSLLHIYG---YFDEEMAVKYISEVALALDYLH---RHGIIHRDLKPDNMLISNEGHIKLTDFGLSK 152 (669)
T ss_pred eCCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence 9999999999987543 5788999999999999999999 7799999999999999999999999999986
No 377
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=6.8e-36 Score=286.90 Aligned_cols=256 Identities=20% Similarity=0.241 Sum_probs=180.7
Q ss_pred HhCCCCcceeeecCCeeEEEEEeCC----CcEEEEEEcccchhHH--H--------HHHHHHHHHHHHhhcccccccccc
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLPN----GKVFALKKLHTSEELA--F--------IKSFKNEAQVLSQVLHRNIVKLYG 269 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~--~--------~~~~~~e~~~l~~l~h~niv~~~~ 269 (496)
.++|.+.+.||+|+||+||+|...+ +..+|+|......... . ......+...+..+.|+|++++++
T Consensus 11 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~ 90 (294)
T PHA02882 11 GKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYG 90 (294)
T ss_pred CCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEE
Confidence 3679999999999999999997654 3456666543222110 0 011122334455567999999998
Q ss_pred eeecCC----eEEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCC
Q 011005 270 YCLHKK----CMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKL 345 (496)
Q Consensus 270 ~~~~~~----~~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~ 345 (496)
++.... ..+++++++.. ++.+.+.... ..++..+..++.|++.||+||| +.+++||||||+|||++.++
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~---~~~~~~~~~i~~qi~~~l~~lH---~~~iiHrDiKp~Nill~~~~ 163 (294)
T PHA02882 91 CGSFKRCRMYYRFILLEKLVE-NTKEIFKRIK---CKNKKLIKNIMKDMLTTLEYIH---EHGISHGDIKPENIMVDGNN 163 (294)
T ss_pred eeeEecCCceEEEEEEehhcc-CHHHHHHhhc---cCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCC
Confidence 776543 34678887643 6666655432 3577888999999999999999 78999999999999999999
Q ss_pred CeEEccccccccccCCCC-------CccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCC
Q 011005 346 EAFVADFGTARLLHADSS-------NRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSS 418 (496)
Q Consensus 346 ~~kl~Dfg~~~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~ 418 (496)
.++|+|||+++.+..... ......||+.|+|||++.+..++.++||||+||++|||++|+.||..........
T Consensus 164 ~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~ 243 (294)
T PHA02882 164 RGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLI 243 (294)
T ss_pred cEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHH
Confidence 999999999987643221 1223468999999999999999999999999999999999999997442110000
Q ss_pred C-Ccc-hhHhhhcCCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHH
Q 011005 419 D-PKI-MLIDVLDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEF 472 (496)
Q Consensus 419 ~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~ 472 (496)
. ... ............+ .....+.+++..|++.+|++||++.++++.+
T Consensus 244 ~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~ 293 (294)
T PHA02882 244 HAAKCDFIKRLHEGKIKIK------NANKFIYDFIECVTKLSYEEKPDYDALIKIF 293 (294)
T ss_pred HHhHHHHHHHhhhhhhccC------CCCHHHHHHHHHHHhCCCCCCCCHHHHHHhh
Confidence 0 000 0111111111111 1124577999999999999999999998754
No 378
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-37 Score=286.98 Aligned_cols=264 Identities=26% Similarity=0.383 Sum_probs=204.9
Q ss_pred HHhCCCCcceeeecCCeeEEEE-EeCCCcEEEEEEcccch------hHHHHHHHHHHHHHHHhhcccccccccceeecC-
Q 011005 203 ATEDFDIRYCIGTGGYGSVYKA-QLPNGKVFALKKLHTSE------ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHK- 274 (496)
Q Consensus 203 ~~~~~~~~~~lg~G~~g~Vy~~-~~~~~~~vavK~~~~~~------~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~- 274 (496)
..++|-+.++||+|||+.|||| +....+.||||+-.... ...+.+-..+|..+.+.++||.||++|+|+..+
T Consensus 461 Ln~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDt 540 (775)
T KOG1151|consen 461 LNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDT 540 (775)
T ss_pred hHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeecc
Confidence 4567888899999999999999 45677889999764322 223445678999999999999999999999754
Q ss_pred CeEEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecC---CCCeEEcc
Q 011005 275 KCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNS---KLEAFVAD 351 (496)
Q Consensus 275 ~~~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~---~~~~kl~D 351 (496)
+..|-|.|||+|.+|.-+|.... .+++.++++|+.||+.||.||... +.+|+|.||||.|||+-+ -|.+||+|
T Consensus 541 dsFCTVLEYceGNDLDFYLKQhk---lmSEKEARSIiMQiVnAL~YLNEi-kpPIIHYDLKPgNILLv~GtacGeIKITD 616 (775)
T KOG1151|consen 541 DSFCTVLEYCEGNDLDFYLKQHK---LMSEKEARSIIMQIVNALKYLNEI-KPPIIHYDLKPGNILLVNGTACGEIKITD 616 (775)
T ss_pred ccceeeeeecCCCchhHHHHhhh---hhhHHHHHHHHHHHHHHHHHHhcc-CCCeeeeccCCccEEEecCcccceeEeee
Confidence 56889999999999999998776 689999999999999999999977 889999999999999954 47899999
Q ss_pred ccccccccCCCCC-------ccccccccccccccccccC----CcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCC
Q 011005 352 FGTARLLHADSSN-------RTLLAGTYGYIAPELAYTM----VMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDP 420 (496)
Q Consensus 352 fg~~~~~~~~~~~-------~~~~~gt~~y~aPE~~~~~----~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~ 420 (496)
||+++.+.++... .+...||.+|++||.+.-+ ..+.++||||+|||+|..+.|+.||............
T Consensus 617 FGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdILqe 696 (775)
T KOG1151|consen 617 FGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQE 696 (775)
T ss_pred cchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHHHhh
Confidence 9999999776554 2335799999999987533 5678999999999999999999999743221110000
Q ss_pred cchhHhhhcCCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhc
Q 011005 421 KIMLIDVLDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITR 476 (496)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~ 476 (496)
. .+...-.-..++... .......+|.+||+..-++|....++..++++..
T Consensus 697 N-TIlkAtEVqFP~KPv-----VsseAkaFIRRCLaYRKeDR~DV~qLA~dpyllP 746 (775)
T KOG1151|consen 697 N-TILKATEVQFPPKPV-----VSSEAKAFIRRCLAYRKEDRIDVQQLACDPYLLP 746 (775)
T ss_pred h-chhcceeccCCCCCc-----cCHHHHHHHHHHHHhhhhhhhhHHHHccCccccc
Confidence 0 000000011111110 1123568899999999999999999999988754
No 379
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=100.00 E-value=1.3e-35 Score=290.09 Aligned_cols=265 Identities=23% Similarity=0.290 Sum_probs=195.2
Q ss_pred CCCCcceeeecCCeeEEEEEeC-C--CcEEEEEEcccch-hHHHHHHHHHHHHHHHhh-cccccccccceeecC----Ce
Q 011005 206 DFDIRYCIGTGGYGSVYKAQLP-N--GKVFALKKLHTSE-ELAFIKSFKNEAQVLSQV-LHRNIVKLYGYCLHK----KC 276 (496)
Q Consensus 206 ~~~~~~~lg~G~~g~Vy~~~~~-~--~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~----~~ 276 (496)
+|++.+.||+|+||.||++... . +..||+|.+.... .....+.+.+|+.+++++ .||||+++++.+... ..
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~ 80 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE 80 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence 4778899999999999999764 3 7789999986532 222345678899999999 599999999875432 45
Q ss_pred EEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccc
Q 011005 277 MFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTAR 356 (496)
Q Consensus 277 ~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~ 356 (496)
.+++++++. ++|.+.+.... .+++..+..++.||+.||.||| ..+++||||||+||+++.++.++|+|||+++
T Consensus 81 ~~~~~e~~~-~~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH---~~givH~dlkp~Nili~~~~~~kl~Dfg~a~ 153 (332)
T cd07857 81 LYLYEELME-ADLHQIIRSGQ---PLTDAHFQSFIYQILCGLKYIH---SANVLHRDLKPGNLLVNADCELKICDFGLAR 153 (332)
T ss_pred EEEEEeccc-CCHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHeEEcCCCCEEeCcCCCce
Confidence 788899886 68888886543 6889999999999999999999 7899999999999999999999999999998
Q ss_pred cccCCCC----Ccccccccccccccccccc-CCcCcccchhhHHHHHHHHHhCCCCCccccccCC--------CCCCcch
Q 011005 357 LLHADSS----NRTLLAGTYGYIAPELAYT-MVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSS--------SSDPKIM 423 (496)
Q Consensus 357 ~~~~~~~----~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~--------~~~~~~~ 423 (496)
....... ......|++.|+|||.+.+ ..++.++||||+|+++|++++|+.||........ .......
T Consensus 154 ~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 233 (332)
T cd07857 154 GFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEET 233 (332)
T ss_pred ecccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHH
Confidence 6543221 1123468899999998765 4688999999999999999999999864321000 0000000
Q ss_pred hHhh-----------hcCCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhcc
Q 011005 424 LIDV-----------LDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRK 477 (496)
Q Consensus 424 ~~~~-----------~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~ 477 (496)
.... ...................+.+++.+||+.||++|||+.|+++|+|+..-
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~~~~~~~ 298 (332)
T cd07857 234 LSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEHPYLAIW 298 (332)
T ss_pred HHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhhhh
Confidence 0000 00000000000000112357899999999999999999999999999644
No 380
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4.2e-37 Score=266.29 Aligned_cols=268 Identities=23% Similarity=0.320 Sum_probs=200.8
Q ss_pred hCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccch-hHHHHHHHHHHHHHHHhhcccccccccceeecC--------
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSE-ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHK-------- 274 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~-------- 274 (496)
+.|.-..++|+|.||.||+|+.+ .|+.||+|++.-.. ....-....+|++++..++|+|++.+++.|...
T Consensus 17 ~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r 96 (376)
T KOG0669|consen 17 SKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDR 96 (376)
T ss_pred hHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCccccc
Confidence 45666778999999999999765 57788888764422 222334568999999999999999999988542
Q ss_pred CeEEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccc
Q 011005 275 KCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGT 354 (496)
Q Consensus 275 ~~~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~ 354 (496)
...++||.+|+. +|.-++... ...++..++.+++.++..||.|+| ...|+|||+||.|+|++.++.+||+|||+
T Consensus 97 ~t~ylVf~~ceh-DLaGlLsn~--~vr~sls~Ikk~Mk~Lm~GL~~iH---r~kilHRDmKaaNvLIt~dgilklADFGl 170 (376)
T KOG0669|consen 97 ATFYLVFDFCEH-DLAGLLSNR--KVRFSLSEIKKVMKGLMNGLYYIH---RNKILHRDMKAANVLITKDGILKLADFGL 170 (376)
T ss_pred ceeeeeHHHhhh-hHHHHhcCc--cccccHHHHHHHHHHHHHHHHHHH---HhhHHhhcccHhhEEEcCCceEEeecccc
Confidence 358999999987 777777654 237899999999999999999999 77999999999999999999999999999
Q ss_pred cccccCCCC----Ccccccccccccccccccc-CCcCcccchhhHHHHHHHHHhCCCCCcccccc-------------CC
Q 011005 355 ARLLHADSS----NRTLLAGTYGYIAPELAYT-MVMTEKCDVYSFGVVTLEVLMGKHPRDILSSL-------------SS 416 (496)
Q Consensus 355 ~~~~~~~~~----~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~el~~g~~p~~~~~~~-------------~~ 416 (496)
++.+..... ..+..+-|.+|++||.+.| ..|+++.|||+.|||+.||+||.+-++..... ..
T Consensus 171 ar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tk 250 (376)
T KOG0669|consen 171 ARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITK 250 (376)
T ss_pred ccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCc
Confidence 977654322 2445567999999998876 47899999999999999999999887643221 11
Q ss_pred CCCCcchhHhhhcCC----CCCCCChhHHHH------HHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccC
Q 011005 417 SSDPKIMLIDVLDQR----LPPPVDRKVIRD------ILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKT 478 (496)
Q Consensus 417 ~~~~~~~~~~~~~~~----~~~~~~~~~~~~------~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~ 478 (496)
...+.......+... ++.......... .....+|+.+++..||.+|+++++++.|.|+.+..
T Consensus 251 evWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~~F~kdp 322 (376)
T KOG0669|consen 251 EVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNHDFFWKDP 322 (376)
T ss_pred ccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhchhhhhcCC
Confidence 222222222222211 111110101111 11456899999999999999999999999998764
No 381
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=8.6e-35 Score=302.45 Aligned_cols=260 Identities=28% Similarity=0.403 Sum_probs=206.5
Q ss_pred HHhCCCCcceeeecCCeeEEEEEeC--------CCcEEEEEEcccchhHHHHHHHHHHHHHHHhh-cccccccccceeec
Q 011005 203 ATEDFDIRYCIGTGGYGSVYKAQLP--------NGKVFALKKLHTSEELAFIKSFKNEAQVLSQV-LHRNIVKLYGYCLH 273 (496)
Q Consensus 203 ~~~~~~~~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~ 273 (496)
..++..+.+.||+|+||.|++|... ....||||.++........+.+..|+++|+.+ .|+||+.++|+|..
T Consensus 294 ~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~ 373 (609)
T KOG0200|consen 294 PRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQ 373 (609)
T ss_pred chhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeecc
Confidence 3455566779999999999999642 14579999998876666778899999999999 59999999999999
Q ss_pred CCeEEEEEEecCCCChhhhhhCCC-----C------C--ccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceE
Q 011005 274 KKCMFLIYEYMERGSLFCNLHNNE-----D------A--VELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNIL 340 (496)
Q Consensus 274 ~~~~~lV~e~~~~g~L~~~l~~~~-----~------~--~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil 340 (496)
++..++|+||++.|+|.+++...+ . . ..++..+.++++.||+.|++||+ +.+++||||.++|||
T Consensus 374 ~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~---~~~~vHRDLAaRNVL 450 (609)
T KOG0200|consen 374 DGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLA---SVPCVHRDLAARNVL 450 (609)
T ss_pred CCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHh---hCCccchhhhhhhEE
Confidence 999999999999999999998765 0 0 13888999999999999999999 778999999999999
Q ss_pred ecCCCCeEEccccccccccCCCCCc-cccc--cccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccCC
Q 011005 341 LNSKLEAFVADFGTARLLHADSSNR-TLLA--GTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSS 416 (496)
Q Consensus 341 ~~~~~~~kl~Dfg~~~~~~~~~~~~-~~~~--gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~ 416 (496)
++++..+||+|||+|+......... .... -...|||||.+....|+.++||||||++|||++| |..||...
T Consensus 451 i~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~----- 525 (609)
T KOG0200|consen 451 ITKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGI----- 525 (609)
T ss_pred ecCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCC-----
Confidence 9999999999999998664433322 1112 2457999999999999999999999999999998 78887531
Q ss_pred CCCCcchhHhhhcCCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHh
Q 011005 417 SSDPKIMLIDVLDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLIT 475 (496)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~ 475 (496)
.......+.+........... ....+.+++..||+.+|++||++.|+.+.+...
T Consensus 526 --~~~~~l~~~l~~G~r~~~P~~---c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~ 579 (609)
T KOG0200|consen 526 --PPTEELLEFLKEGNRMEQPEH---CSDEIYDLMKSCWNADPEDRPTFSECVEFFEKH 579 (609)
T ss_pred --CcHHHHHHHHhcCCCCCCCCC---CCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHH
Confidence 111122333333222222121 233577899999999999999999999888763
No 382
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=100.00 E-value=6.6e-35 Score=271.06 Aligned_cols=228 Identities=24% Similarity=0.247 Sum_probs=181.0
Q ss_pred cCCeeEEEEEe-CCCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEecCCCChhhhhh
Q 011005 216 GGYGSVYKAQL-PNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLH 294 (496)
Q Consensus 216 G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~~~~g~L~~~l~ 294 (496)
|.+|.||++.+ .+++.||+|.+..... ..+|...+....||||+++++++...+..++||||+++|+|.+++.
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~~------~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~ 77 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSSE------YSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHIS 77 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchhh------hhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHH
Confidence 88999999966 4788999999876432 2334444555579999999999999999999999999999999987
Q ss_pred CCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCCCcccccccccc
Q 011005 295 NNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGY 374 (496)
Q Consensus 295 ~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y 374 (496)
... .+++..+..++.|++.||+||| +.+++||||||+||+++.++.++++|||.+...... .....++..|
T Consensus 78 ~~~---~l~~~~~~~~~~ql~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~---~~~~~~~~~y 148 (237)
T cd05576 78 KFL---NIPEECVKRWAAEMVVALDALH---REGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDS---CDGEAVENMY 148 (237)
T ss_pred Hhc---CCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHEEEcCCCCEEEecccchhccccc---cccCCcCccc
Confidence 643 5889999999999999999999 789999999999999999999999999988665432 1223456789
Q ss_pred ccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHHHHHHHHHHHHHhc
Q 011005 375 IAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVIRDILLISTVSFAC 454 (496)
Q Consensus 375 ~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 454 (496)
+|||...+..++.++||||+|+++|||++|+.|+....... .......++.. ....+.+++.+|
T Consensus 149 ~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~---------~~~~~~~~~~~-------~~~~~~~li~~~ 212 (237)
T cd05576 149 CAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSGI---------NTHTTLNIPEW-------VSEEARSLLQQL 212 (237)
T ss_pred cCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchhc---------ccccccCCccc-------CCHHHHHHHHHH
Confidence 99999988889999999999999999999998875321100 00000011111 122467899999
Q ss_pred ccCCCCCCCCH-----HHHHHHHHH
Q 011005 455 LQSNPKSRPTM-----QSVSQEFLI 474 (496)
Q Consensus 455 l~~dP~~Rps~-----~evl~~~~~ 474 (496)
++.||++||++ +|+++|+|+
T Consensus 213 l~~dp~~R~~~~~~~~~~~~~h~~~ 237 (237)
T cd05576 213 LQFNPTERLGAGVAGVEDIKSHPFF 237 (237)
T ss_pred ccCCHHHhcCCCccchHHHHcCCCC
Confidence 99999999996 888888874
No 383
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-35 Score=272.82 Aligned_cols=254 Identities=23% Similarity=0.365 Sum_probs=209.0
Q ss_pred hCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccch--hHHHHHHHHHHHHHHHhh-cccccccccceeecCCeEEEE
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQV-LHRNIVKLYGYCLHKKCMFLI 280 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lV 280 (496)
.+|.....||+|+||.|-+|..+ ..+.+|||+++++. +.+..+--+.|-++++.- +-|.+++++.+|+.-+.+|.|
T Consensus 349 tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyFV 428 (683)
T KOG0696|consen 349 TDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYFV 428 (683)
T ss_pred cccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheeeE
Confidence 46888999999999999999665 46789999998753 112223345667777666 478999999999999999999
Q ss_pred EEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccC
Q 011005 281 YEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHA 360 (496)
Q Consensus 281 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 360 (496)
|||+.||+|--+++..+ .+.+..+.-++..|+-||-+|| ++||++||||.+||+++.+|++||+|||+++.--.
T Consensus 429 MEyvnGGDLMyhiQQ~G---kFKEp~AvFYAaEiaigLFFLh---~kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~ 502 (683)
T KOG0696|consen 429 MEYVNGGDLMYHIQQVG---KFKEPVAVFYAAEIAIGLFFLH---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIF 502 (683)
T ss_pred EEEecCchhhhHHHHhc---ccCCchhhhhhHHHHHHhhhhh---cCCeeeeeccccceEeccCCceEeeeccccccccc
Confidence 99999999988887655 6777888899999999999999 88999999999999999999999999999987766
Q ss_pred CCCCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhH
Q 011005 361 DSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKV 440 (496)
Q Consensus 361 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 440 (496)
+.....+.+|||.|+|||++...+|...+|.||+|++||||+.|++||+ ..++++....+.++....+.+-
T Consensus 503 ~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFd-------GeDE~elF~aI~ehnvsyPKsl-- 573 (683)
T KOG0696|consen 503 DGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFD-------GEDEDELFQAIMEHNVSYPKSL-- 573 (683)
T ss_pred CCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCC-------CCCHHHHHHHHHHccCcCcccc--
Confidence 6666778999999999999999999999999999999999999999997 4445666667777766554322
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCC-----HHHHHHHHHHhc
Q 011005 441 IRDILLISTVSFACLQSNPKSRPT-----MQSVSQEFLITR 476 (496)
Q Consensus 441 ~~~~~~l~~li~~cl~~dP~~Rps-----~~evl~~~~~~~ 476 (496)
. .+...+....+...|.+|.. -++|.+|+|+++
T Consensus 574 S---kEAv~ickg~ltK~P~kRLGcg~~ge~di~~H~FFR~ 611 (683)
T KOG0696|consen 574 S---KEAVAICKGLLTKHPGKRLGCGPEGERDIREHPFFRR 611 (683)
T ss_pred c---HHHHHHHHHHhhcCCccccCCCCccccchhhCcchhh
Confidence 1 13456677889999999974 356666766643
No 384
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=100.00 E-value=1.9e-34 Score=297.02 Aligned_cols=270 Identities=20% Similarity=0.241 Sum_probs=175.8
Q ss_pred HHhCCCCcceeeecCCeeEEEEEeC-C----CcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccce------e
Q 011005 203 ATEDFDIRYCIGTGGYGSVYKAQLP-N----GKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGY------C 271 (496)
Q Consensus 203 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~----~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~------~ 271 (496)
..++|.+.+.||+|+||.||+|.+. + +..||+|++...... +....+ .++...+.++..++.. .
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~---e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~ 204 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAV---EIWMNE--RVRRACPNSCADFVYGFLEPVSS 204 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccchh---HHHHHH--HHHhhchhhHHHHHHhhhccccc
Confidence 4578999999999999999999765 4 689999987653321 111111 1122222333332222 2
Q ss_pred ecCCeEEEEEEecCCCChhhhhhCCCCC-----------------ccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCC
Q 011005 272 LHKKCMFLIYEYMERGSLFCNLHNNEDA-----------------VELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDI 334 (496)
Q Consensus 272 ~~~~~~~lV~e~~~~g~L~~~l~~~~~~-----------------~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl 334 (496)
......++|+||+.+++|.+++...... .......+..++.|++.||.||| +.+|+||||
T Consensus 205 ~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH---~~gIiHRDL 281 (566)
T PLN03225 205 KKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLH---STGIVHRDV 281 (566)
T ss_pred ccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHH---HCCEEeCcC
Confidence 3456789999999999999988754211 01123345679999999999999 789999999
Q ss_pred CCCceEecC-CCCeEEccccccccccCCC-CCccccccccccccccccccC----------------------CcCcccc
Q 011005 335 SSNNILLNS-KLEAFVADFGTARLLHADS-SNRTLLAGTYGYIAPELAYTM----------------------VMTEKCD 390 (496)
Q Consensus 335 kp~Nil~~~-~~~~kl~Dfg~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~----------------------~~~~~~D 390 (496)
||+|||++. ++.+||+|||+++.+.... .......+++.|+|||.+... .++.++|
T Consensus 282 KP~NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~D 361 (566)
T PLN03225 282 KPQNIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFD 361 (566)
T ss_pred CHHHEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcc
Confidence 999999986 5799999999998654322 223446789999999965422 2345679
Q ss_pred hhhHHHHHHHHHhCCCCCccccc-----cCCCCCCcchhHhhhcCCCCCCCChh---HHHHHHHHHHHHHhcccCCCCCC
Q 011005 391 VYSFGVVTLEVLMGKHPRDILSS-----LSSSSDPKIMLIDVLDQRLPPPVDRK---VIRDILLISTVSFACLQSNPKSR 462 (496)
Q Consensus 391 vwslG~il~el~~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~li~~cl~~dP~~R 462 (496)
|||+||++|||+++..|++.... .......................... .........+|+.+||+.||++|
T Consensus 362 VwSlGviL~el~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP~kR 441 (566)
T PLN03225 362 IYSAGLIFLQMAFPNLRSDSNLIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFKGRQR 441 (566)
T ss_pred cHHHHHHHHHHHhCcCCCchHHHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccCCcccC
Confidence 99999999999998777542100 00000000000011111100000000 00011124589999999999999
Q ss_pred CCHHHHHHHHHHhccCCC
Q 011005 463 PTMQSVSQEFLITRKTPL 480 (496)
Q Consensus 463 ps~~evl~~~~~~~~~~~ 480 (496)
||+.|+++|+|+.+....
T Consensus 442 ~ta~e~L~Hpff~~~~~~ 459 (566)
T PLN03225 442 ISAKAALAHPYFDREGLL 459 (566)
T ss_pred CCHHHHhCCcCcCCCCcc
Confidence 999999999999876554
No 385
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=100.00 E-value=1.3e-33 Score=283.51 Aligned_cols=268 Identities=16% Similarity=0.203 Sum_probs=185.2
Q ss_pred HhCCCCcceeeecCCeeEEEEEe-----------------CCCcEEEEEEcccchhHH-------------HHHHHHHHH
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQL-----------------PNGKVFALKKLHTSEELA-------------FIKSFKNEA 253 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~-----------------~~~~~vavK~~~~~~~~~-------------~~~~~~~e~ 253 (496)
.++|.+.++||+|+||+||+|.. ..++.||||++....... ..+....|+
T Consensus 144 ~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~ 223 (507)
T PLN03224 144 SDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEA 223 (507)
T ss_pred ccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHH
Confidence 56899999999999999999953 245689999986543211 012234577
Q ss_pred HHHHhhcccc-----cccccceeec--------CCeEEEEEEecCCCChhhhhhCCCC---------------------C
Q 011005 254 QVLSQVLHRN-----IVKLYGYCLH--------KKCMFLIYEYMERGSLFCNLHNNED---------------------A 299 (496)
Q Consensus 254 ~~l~~l~h~n-----iv~~~~~~~~--------~~~~~lV~e~~~~g~L~~~l~~~~~---------------------~ 299 (496)
.++.+++|.+ +++++++|.. ....++||||+++++|.++++.... .
T Consensus 224 ~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~ 303 (507)
T PLN03224 224 YMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQ 303 (507)
T ss_pred HHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhccc
Confidence 7777786654 4677787753 3468999999999999998874311 1
Q ss_pred ccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCCC-cccccccccccccc
Q 011005 300 VELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSN-RTLLAGTYGYIAPE 378 (496)
Q Consensus 300 ~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~gt~~y~aPE 378 (496)
..+++..+..++.|++.+|.||| ..+|+||||||+||+++.++.+||+|||++......... .....+++.|+|||
T Consensus 304 ~~~~~~~~~~i~~ql~~aL~~lH---~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aPE 380 (507)
T PLN03224 304 DKRDINVIKGVMRQVLTGLRKLH---RIGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPPE 380 (507)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeChh
Confidence 13467788899999999999999 779999999999999999999999999999765432211 11233578999999
Q ss_pred ccccCCc----------------------CcccchhhHHHHHHHHHhCCC-CCccccccCCCCCC-cchhH---hhhcCC
Q 011005 379 LAYTMVM----------------------TEKCDVYSFGVVTLEVLMGKH-PRDILSSLSSSSDP-KIMLI---DVLDQR 431 (496)
Q Consensus 379 ~~~~~~~----------------------~~~~DvwslG~il~el~~g~~-p~~~~~~~~~~~~~-~~~~~---~~~~~~ 431 (496)
.+..... ..+.||||+||++|+|++|.. |+............ ..... ......
T Consensus 381 ~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~~~ 460 (507)
T PLN03224 381 ELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKGQK 460 (507)
T ss_pred hhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhcccC
Confidence 8764321 124799999999999999986 66432211111000 00000 000111
Q ss_pred CCCCCChhHHHHHHHHHHHHHhcccCCC---CCCCCHHHHHHHHHHhcc
Q 011005 432 LPPPVDRKVIRDILLISTVSFACLQSNP---KSRPTMQSVSQEFLITRK 477 (496)
Q Consensus 432 ~~~~~~~~~~~~~~~l~~li~~cl~~dP---~~Rps~~evl~~~~~~~~ 477 (496)
..... .........+|+.+||..+| .+|+|++|+++|+|+...
T Consensus 461 ~~~~~---~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~Hp~f~~~ 506 (507)
T PLN03224 461 YDFSL---LDRNKEAGWDLACKLITKRDQANRGRLSVGQALSHRFFLPE 506 (507)
T ss_pred CCccc---ccccChHHHHHHHHHhccCCCCcccCCCHHHHhCCCCcCCC
Confidence 11110 11122346788999999766 789999999999999654
No 386
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=100.00 E-value=2.6e-33 Score=260.90 Aligned_cols=243 Identities=29% Similarity=0.395 Sum_probs=195.8
Q ss_pred CCeeEEEEEeC-CCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEecCCCChhhhhhC
Q 011005 217 GYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHN 295 (496)
Q Consensus 217 ~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~~~~g~L~~~l~~ 295 (496)
+||.||+|... +++.+|+|.+.........+.+.+|++.+++++|+|++++++++......++++|++++++|.+++..
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~ 80 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK 80 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence 58999999876 48999999997755433257889999999999999999999999999999999999999999999876
Q ss_pred CCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCCCccccccccccc
Q 011005 296 NEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYI 375 (496)
Q Consensus 296 ~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~ 375 (496)
.. .+++..+..++.+++.++.+|| ..+++|+||+|+||++++++.++++|||.+....... ......++..|+
T Consensus 81 ~~---~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~-~~~~~~~~~~~~ 153 (244)
T smart00220 81 RG---RLSEDEARFYARQILSALEYLH---SNGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG-LLTTFVGTPEYM 153 (244)
T ss_pred cc---CCCHHHHHHHHHHHHHHHHHHH---HcCeecCCcCHHHeEECCCCcEEEccccceeeecccc-ccccccCCcCCC
Confidence 54 3788999999999999999999 7799999999999999999999999999998765432 233456788999
Q ss_pred cccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHHHHHHHHHHHHHhcc
Q 011005 376 APELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVIRDILLISTVSFACL 455 (496)
Q Consensus 376 aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 455 (496)
|||.+.+..++.++||||+|+++|++++|..||... . ......+............ .......+.+++.+|+
T Consensus 154 ~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~------~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~l 225 (244)
T smart00220 154 APEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGD------D-QLLELFKKIGKPKPPFPPP-EWKISPEAKDLIRKLL 225 (244)
T ss_pred CHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCC------C-cHHHHHHHHhccCCCCccc-cccCCHHHHHHHHHHc
Confidence 999999888999999999999999999999998632 1 1111222222211111100 0002235778999999
Q ss_pred cCCCCCCCCHHHHHHHHHH
Q 011005 456 QSNPKSRPTMQSVSQEFLI 474 (496)
Q Consensus 456 ~~dP~~Rps~~evl~~~~~ 474 (496)
..+|++||++.++++++|+
T Consensus 226 ~~~p~~Rp~~~~~~~~~~~ 244 (244)
T smart00220 226 VKDPEKRLTAEEALQHPFF 244 (244)
T ss_pred cCCchhccCHHHHhhCCCC
Confidence 9999999999999998774
No 387
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-33 Score=254.39 Aligned_cols=261 Identities=23% Similarity=0.375 Sum_probs=210.3
Q ss_pred HhCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccc--hhHHHHHHHHHHHHHHHhh-cccccccccceeecCCeEEE
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTS--EELAFIKSFKNEAQVLSQV-LHRNIVKLYGYCLHKKCMFL 279 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~l 279 (496)
.++|.+...||+|+|+.|-.++++ ..+.||+|++++. .+.+..+-+..|-.+...- +||.+|-++.+|.....+++
T Consensus 249 l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlff 328 (593)
T KOG0695|consen 249 LQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFF 328 (593)
T ss_pred cccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEE
Confidence 367999999999999999999765 5788999998763 2223344556677776666 69999999999999999999
Q ss_pred EEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEcccccccccc
Q 011005 280 IYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLH 359 (496)
Q Consensus 280 V~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 359 (496)
|.||.+||+|--+++.++ .++++.++-+...|.-||.||| ++||++||+|.+|||++..|++|++|+|+++.--
T Consensus 329 vieyv~ggdlmfhmqrqr---klpeeharfys~ei~lal~flh---~rgiiyrdlkldnvlldaeghikltdygmcke~l 402 (593)
T KOG0695|consen 329 VIEYVNGGDLMFHMQRQR---KLPEEHARFYSAEICLALNFLH---ERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGL 402 (593)
T ss_pred EEEEecCcceeeehhhhh---cCcHHHhhhhhHHHHHHHHHHh---hcCeeeeeccccceEEccCCceeecccchhhcCC
Confidence 999999999987777665 7899999999999999999999 8899999999999999999999999999999877
Q ss_pred CCCCCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCC-CcchhHhhhcCCCCCCCCh
Q 011005 360 ADSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSD-PKIMLIDVLDQRLPPPVDR 438 (496)
Q Consensus 360 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 438 (496)
.+....++.+|||.|.|||++.+..|...+|.|++|++++||+.|+.||++.....+... ++....-++.+.+.-+.+-
T Consensus 403 ~~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilekqiriprsl 482 (593)
T KOG0695|consen 403 GPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQIRIPRSL 482 (593)
T ss_pred CCCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhhccccccee
Confidence 777778889999999999999999999999999999999999999999998763322222 2222233333433322211
Q ss_pred hHHHHHHHHHHHHHhcccCCCCCCC------CHHHHHHHHHHh
Q 011005 439 KVIRDILLISTVSFACLQSNPKSRP------TMQSVSQEFLIT 475 (496)
Q Consensus 439 ~~~~~~~~l~~li~~cl~~dP~~Rp------s~~evl~~~~~~ 475 (496)
......++..-|.+||.+|. .+.++-.|.|+.
T Consensus 483 -----svkas~vlkgflnkdp~erlgc~~~~g~~dik~h~ffr 520 (593)
T KOG0695|consen 483 -----SVKASHVLKGFLNKDPKERLGCRPQTGFSDIKSHAFFR 520 (593)
T ss_pred -----ehhhHHHHHHhhcCCcHHhcCCCcccchhhhhcchhhh
Confidence 11234566688999999985 367777777664
No 388
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-34 Score=273.36 Aligned_cols=255 Identities=22% Similarity=0.318 Sum_probs=206.2
Q ss_pred hCCCCcceeeecCCeeEEEEEeCCCc-EEEEEEcccch--hHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEE
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLPNGK-VFALKKLHTSE--ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIY 281 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~~~~-~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~ 281 (496)
.+++.+..||-|+||.|=++..++.. .+|+|.+++.. +....+.+..|-.+|...+.|.||++|..|.+.+..|+.|
T Consensus 420 ~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLm 499 (732)
T KOG0614|consen 420 SDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLM 499 (732)
T ss_pred hhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhH
Confidence 34556677999999999999876544 37888887643 2233456788999999999999999999999999999999
Q ss_pred EecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCC
Q 011005 282 EYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHAD 361 (496)
Q Consensus 282 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 361 (496)
|-|-||.+...+.+.+ .|+...+.-++.-+++|++||| .++||+|||||+|.+++.+|-+||.|||+|+.+...
T Consensus 500 EaClGGElWTiLrdRg---~Fdd~tarF~~acv~EAfeYLH---~k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g 573 (732)
T KOG0614|consen 500 EACLGGELWTILRDRG---SFDDYTARFYVACVLEAFEYLH---RKGIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSG 573 (732)
T ss_pred HhhcCchhhhhhhhcC---CcccchhhhhHHHHHHHHHHHH---hcCceeccCChhheeeccCCceEEeehhhHHHhccC
Confidence 9999999999998766 7888888999999999999999 889999999999999999999999999999998655
Q ss_pred CCCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHH
Q 011005 362 SSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVI 441 (496)
Q Consensus 362 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (496)
... -+++|||.|.|||++.....+.++|.||+|+++|||++|.+||+...++ .....++...-.-....
T Consensus 574 ~KT-wTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpm-------ktYn~ILkGid~i~~Pr--- 642 (732)
T KOG0614|consen 574 RKT-WTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPM-------KTYNLILKGIDKIEFPR--- 642 (732)
T ss_pred Cce-eeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchH-------HHHHHHHhhhhhhhccc---
Confidence 443 3579999999999999999999999999999999999999999743322 12222222111001111
Q ss_pred HHHHHHHHHHHhcccCCCCCCCC-----HHHHHHHHHHhc
Q 011005 442 RDILLISTVSFACLQSNPKSRPT-----MQSVSQEFLITR 476 (496)
Q Consensus 442 ~~~~~l~~li~~cl~~dP~~Rps-----~~evl~~~~~~~ 476 (496)
.......+++.+....+|.+|.- +.++-+|-|+..
T Consensus 643 ~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH~Wf~g 682 (732)
T KOG0614|consen 643 RITKTATDLIKKLCRDNPTERLGYQKGGINDIKKHRWFEG 682 (732)
T ss_pred ccchhHHHHHHHHHhcCcHhhhccccCChHHHHhhhhhhc
Confidence 11223568888999999999986 889999998853
No 389
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=100.00 E-value=2e-33 Score=257.60 Aligned_cols=261 Identities=20% Similarity=0.299 Sum_probs=208.8
Q ss_pred HHHHHHHhCCCCcceeeecCCeeEEEEEeC------CCcEEEEEEcccchhHHHHHHHHHHHHHHHhhccccccccccee
Q 011005 198 EDLIEATEDFDIRYCIGTGGYGSVYKAQLP------NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYC 271 (496)
Q Consensus 198 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~ 271 (496)
.++....++++....+-+|.||.||.|.+. +.+.|.+|.++...+.-....+..|.-.+..+.|||+.++.+.+
T Consensus 277 ~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ 356 (563)
T KOG1024|consen 277 QELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVS 356 (563)
T ss_pred HhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEE
Confidence 455555677888888999999999999543 45668888888777666667788898888889999999999988
Q ss_pred ecC-CeEEEEEEecCCCChhhhhh-----CCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCC
Q 011005 272 LHK-KCMFLIYEYMERGSLFCNLH-----NNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKL 345 (496)
Q Consensus 272 ~~~-~~~~lV~e~~~~g~L~~~l~-----~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~ 345 (496)
.+. ...+.++.++.-|+|..++. +......++..+...++.|++.|++||| +.+++|.||.++|+++++.-
T Consensus 357 ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh---~~~ViHkDiAaRNCvIdd~L 433 (563)
T KOG1024|consen 357 IEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLH---NHGVIHKDIAARNCVIDDQL 433 (563)
T ss_pred eeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHH---hcCcccchhhhhcceehhhe
Confidence 664 46788899999999999988 3344456777888899999999999999 88999999999999999999
Q ss_pred CeEEccccccccccCCCCC--ccccccccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccCCCCCCcc
Q 011005 346 EAFVADFGTARLLHADSSN--RTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSSDPKI 422 (496)
Q Consensus 346 ~~kl~Dfg~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~~~~~ 422 (496)
++||+|=.+++.+-+.... ......+..||+||.+....|+.++||||||+++|||+| |+.|+...+ +.+
T Consensus 434 qVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeID-------PfE 506 (563)
T KOG1024|consen 434 QVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEID-------PFE 506 (563)
T ss_pred eEEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccC-------HHH
Confidence 9999999999877544332 122335668999999999999999999999999999998 899986432 333
Q ss_pred hhHhhhcC-CCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHH
Q 011005 423 MLIDVLDQ-RLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFL 473 (496)
Q Consensus 423 ~~~~~~~~-~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~ 473 (496)
+..-..++ ++..+ .+.+.++..++.-||..+|++||+++|++.-+-
T Consensus 507 m~~ylkdGyRlaQP-----~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLs 553 (563)
T KOG1024|consen 507 MEHYLKDGYRLAQP-----FNCPDELFTVMACCWALLPEERPSFSQLVICLS 553 (563)
T ss_pred HHHHHhccceecCC-----CCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHH
Confidence 43333333 33222 234556888999999999999999999987654
No 390
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-34 Score=287.81 Aligned_cols=243 Identities=26% Similarity=0.368 Sum_probs=191.6
Q ss_pred cceeeecCCe-eEEEEEeCCCcEEEEEEcccchhHHHHHHHHHHHHHHHhhc-ccccccccceeecCCeEEEEEEecCCC
Q 011005 210 RYCIGTGGYG-SVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVL-HRNIVKLYGYCLHKKCMFLIYEYMERG 287 (496)
Q Consensus 210 ~~~lg~G~~g-~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lV~e~~~~g 287 (496)
.+.+|.|+.| .||+|.+ +|+.||||++-... .....+|+..++.-+ |||||++++.-.+....|++.|.|..
T Consensus 514 ~eilG~Gs~Gt~Vf~G~y-e~R~VAVKrll~e~----~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC~~- 587 (903)
T KOG1027|consen 514 KEILGYGSNGTVVFRGVY-EGREVAVKRLLEEF----FDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELCAC- 587 (903)
T ss_pred HHHcccCCCCcEEEEEee-CCceehHHHHhhHh----HHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHhhh-
Confidence 4568999987 6899998 67899999986543 345689999999984 99999999999999999999999964
Q ss_pred ChhhhhhCC-CCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecC---C--CCeEEccccccccccCC
Q 011005 288 SLFCNLHNN-EDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNS---K--LEAFVADFGTARLLHAD 361 (496)
Q Consensus 288 ~L~~~l~~~-~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~---~--~~~kl~Dfg~~~~~~~~ 361 (496)
+|.+++... .+.........+.+..|++.||+||| +.+||||||||.||||+. + ..++|+|||+++.+..+
T Consensus 588 sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLH---sl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~ 664 (903)
T KOG1027|consen 588 SLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLH---SLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGG 664 (903)
T ss_pred hHHHHHhccccchhhcccccHHHHHHHHHHHHHHHH---hcccccccCCCceEEEEccCCCcceeEEecccccccccCCC
Confidence 999999874 11111222445678999999999999 789999999999999976 2 46899999999998765
Q ss_pred CCC---ccccccccccccccccccCCcCcccchhhHHHHHHHHHhC-CCCCccccccCCCCCCcchhHhhhcCC-----C
Q 011005 362 SSN---RTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMG-KHPRDILSSLSSSSDPKIMLIDVLDQR-----L 432 (496)
Q Consensus 362 ~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~-----~ 432 (496)
... .....||.+|+|||++....-+.++||||+||++|+.++| .+||+..... + .+++... +
T Consensus 665 ~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R------~---~NIl~~~~~L~~L 735 (903)
T KOG1027|consen 665 KSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLER------Q---ANILTGNYTLVHL 735 (903)
T ss_pred cchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHh------h---hhhhcCccceeee
Confidence 433 3446799999999999999989999999999999998886 9999743211 1 1111111 1
Q ss_pred CCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhcc
Q 011005 433 PPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRK 477 (496)
Q Consensus 433 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~ 477 (496)
.+..+. ...+||.+|+.+||..||++.+|+.||++...
T Consensus 736 ~~~~d~-------eA~dLI~~ml~~dP~~RPsa~~VL~HPlFW~~ 773 (903)
T KOG1027|consen 736 EPLPDC-------EAKDLISRMLNPDPQLRPSATDVLNHPLFWDS 773 (903)
T ss_pred ccCchH-------HHHHHHHHhcCCCcccCCCHHHHhCCCccCCh
Confidence 111111 46799999999999999999999999998765
No 391
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.8e-33 Score=269.58 Aligned_cols=201 Identities=25% Similarity=0.387 Sum_probs=172.4
Q ss_pred hCCCCcceeeecCCeeEEEEE-eCCCcEEEEEEcccchh--HHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEE
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQ-LPNGKVFALKKLHTSEE--LAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIY 281 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~ 281 (496)
.-|..++.||-|+||+|.+++ ......||.|.+++.+- .....-++.|-.||..-+.+=||++|-.|.+++.+|+||
T Consensus 629 SmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVM 708 (1034)
T KOG0608|consen 629 SMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVM 708 (1034)
T ss_pred cceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEE
Confidence 347778889999999999994 44577899999987652 223345688999999999999999999999999999999
Q ss_pred EecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCC
Q 011005 282 EYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHAD 361 (496)
Q Consensus 282 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 361 (496)
+|++||++-.+|-+.+ -|.+..++.++..++.|+++.| +.|+|||||||+|||||.+|++||+|||+++.+...
T Consensus 709 dYIPGGDmMSLLIrmg---IFeE~LARFYIAEltcAiesVH---kmGFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWT 782 (1034)
T KOG0608|consen 709 DYIPGGDMMSLLIRMG---IFEEDLARFYIAELTCAIESVH---KMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWT 782 (1034)
T ss_pred eccCCccHHHHHHHhc---cCHHHHHHHHHHHHHHHHHHHH---hccceecccCccceEEccCCceeeeeccccccceec
Confidence 9999999999887655 6888889999999999999999 889999999999999999999999999999754210
Q ss_pred ---------CCC---------------------------------ccccccccccccccccccCCcCcccchhhHHHHHH
Q 011005 362 ---------SSN---------------------------------RTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTL 399 (496)
Q Consensus 362 ---------~~~---------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ 399 (496)
... ....+||+.|+|||++....|+..+|.||.|||||
T Consensus 783 HdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~ 862 (1034)
T KOG0608|consen 783 HDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILY 862 (1034)
T ss_pred cccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHH
Confidence 000 00136999999999999999999999999999999
Q ss_pred HHHhCCCCCccc
Q 011005 400 EVLMGKHPRDIL 411 (496)
Q Consensus 400 el~~g~~p~~~~ 411 (496)
||+.|++||-..
T Consensus 863 em~~g~~pf~~~ 874 (1034)
T KOG0608|consen 863 EMLVGQPPFLAD 874 (1034)
T ss_pred HHhhCCCCccCC
Confidence 999999999543
No 392
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-32 Score=257.66 Aligned_cols=131 Identities=23% Similarity=0.402 Sum_probs=112.9
Q ss_pred hCCCCcceeeecCCeeEEEEE-eCCCcEEEEEEcccchhHHHHHHHHHHHHHHHhhc-----c---cccccccceeec--
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQ-LPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVL-----H---RNIVKLYGYCLH-- 273 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~-----h---~niv~~~~~~~~-- 273 (496)
.+|.+.++||.|.|++||+|. ..+.+.||+|+.+... .+.+....|++++++++ | ..||++++.|..
T Consensus 78 gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAq--hYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsG 155 (590)
T KOG1290|consen 78 GRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQ--HYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSG 155 (590)
T ss_pred ceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhh--HHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecC
Confidence 689999999999999999995 4578899999998765 34566789999999995 2 479999999975
Q ss_pred --CCeEEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEe
Q 011005 274 --KKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILL 341 (496)
Q Consensus 274 --~~~~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~ 341 (496)
+.+++||+|++ |.+|..++.+.. ...++...+.+|++||+.||.|||.. .||||.||||+|||+
T Consensus 156 pNG~HVCMVfEvL-GdnLLklI~~s~-YrGlpl~~VK~I~~qvL~GLdYLH~e--cgIIHTDlKPENvLl 221 (590)
T KOG1290|consen 156 PNGQHVCMVFEVL-GDNLLKLIKYSN-YRGLPLSCVKEICRQVLTGLDYLHRE--CGIIHTDLKPENVLL 221 (590)
T ss_pred CCCcEEEEEehhh-hhHHHHHHHHhC-CCCCcHHHHHHHHHHHHHHHHHHHHh--cCccccCCCcceeee
Confidence 45899999998 668888888754 33689999999999999999999985 599999999999999
No 393
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=100.00 E-value=3.2e-33 Score=264.62 Aligned_cols=266 Identities=20% Similarity=0.217 Sum_probs=207.9
Q ss_pred HHHHhCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchhHHHHHHHHHHHHHHHhhc------ccccccccceeec
Q 011005 201 IEATEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVL------HRNIVKLYGYCLH 273 (496)
Q Consensus 201 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~------h~niv~~~~~~~~ 273 (496)
+....+|.+....|+|-|++|..|.+. -|..||||++....... +.=..|+++|++|+ --|+++++..|..
T Consensus 428 E~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M~--KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~h 505 (752)
T KOG0670|consen 428 ELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVMH--KTGLKELEILKKLNDADPEDKFHCLRLFRHFKH 505 (752)
T ss_pred hhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchHHh--hhhhHHHHHHHHhhccCchhhhHHHHHHHHhhh
Confidence 345678999999999999999999654 57899999998765332 44578999999996 3589999999999
Q ss_pred CCeEEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCC-CeEEccc
Q 011005 274 KKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKL-EAFVADF 352 (496)
Q Consensus 274 ~~~~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~-~~kl~Df 352 (496)
.+++|||+|-+ .-+|.+.|.+.+....+....+..++.|+.-||..|. ..+|+|.||||+|||+++.. .+|||||
T Consensus 506 knHLClVFE~L-slNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK---~c~vlHaDIKPDNiLVNE~k~iLKLCDf 581 (752)
T KOG0670|consen 506 KNHLCLVFEPL-SLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLK---KCGVLHADIKPDNILVNESKNILKLCDF 581 (752)
T ss_pred cceeEEEehhh-hchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHH---hcCeeecccCccceEeccCcceeeeccC
Confidence 99999999987 4599999999888888999999999999999999999 77999999999999999874 5799999
Q ss_pred cccccccCCCCCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCcccccc--------CCCCC-----
Q 011005 353 GTARLLHADSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSL--------SSSSD----- 419 (496)
Q Consensus 353 g~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~--------~~~~~----- 419 (496)
|.|....... .+.+.-+..|.|||++.|..|+...|+||.||+|||+.||+..|.....- .....
T Consensus 582 GSA~~~~ene--itPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KGk~p~Kml 659 (752)
T KOG0670|consen 582 GSASFASENE--ITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKGKFPNKML 659 (752)
T ss_pred cccccccccc--ccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcCCCcHHHh
Confidence 9998764332 22233466899999999999999999999999999999999887532110 00000
Q ss_pred -------------------------------------CcchhHhhhcCCCCCCCChhHHHHHHHHHHHHHhcccCCCCCC
Q 011005 420 -------------------------------------PKIMLIDVLDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSR 462 (496)
Q Consensus 420 -------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R 462 (496)
+...+...+.... ............+.+|+.+|+..||++|
T Consensus 660 RKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q--~~~deq~~~~~~~rdLLdkml~LdP~KR 737 (752)
T KOG0670|consen 660 RKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQ--RLPDEQPKIVQQLRDLLDKMLILDPEKR 737 (752)
T ss_pred hhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccC--CCCchhHHHHHHHHHHHHHHhccChhhc
Confidence 0000000000000 0112223344568899999999999999
Q ss_pred CCHHHHHHHHHHhc
Q 011005 463 PTMQSVSQEFLITR 476 (496)
Q Consensus 463 ps~~evl~~~~~~~ 476 (496)
.|..|+|+|+|++.
T Consensus 738 it~nqAL~HpFi~~ 751 (752)
T KOG0670|consen 738 ITVNQALKHPFITE 751 (752)
T ss_pred CCHHHHhcCCcccC
Confidence 99999999999875
No 394
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=100.00 E-value=4.7e-33 Score=234.48 Aligned_cols=200 Identities=26% Similarity=0.366 Sum_probs=165.5
Q ss_pred CCCCcceeeecCCeeEEEEEe-CCCcEEEEEEcccchhHHHHHHHHHHHHHHHhh-cccccccccceeecCCeEEEEEEe
Q 011005 206 DFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSEELAFIKSFKNEAQVLSQV-LHRNIVKLYGYCLHKKCMFLIYEY 283 (496)
Q Consensus 206 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lV~e~ 283 (496)
...-+..||+|+||.|-+.++ .+|+..|+|.++..-..+..++..+|+.+..+. .+|.+|.++|........++.||.
T Consensus 47 ~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcME~ 126 (282)
T KOG0984|consen 47 DLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICMEL 126 (282)
T ss_pred hhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeHHH
Confidence 344456699999999999865 589999999998876666678888999987776 699999999999999999999999
Q ss_pred cCCCChhhhhhC-CCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCC
Q 011005 284 MERGSLFCNLHN-NEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADS 362 (496)
Q Consensus 284 ~~~g~L~~~l~~-~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 362 (496)
|+. ||..+-.+ ...+..+++.-.-+|+..+++||.|||+ ...++|||+||+|||++.+|++|+||||.+-.+.+.-
T Consensus 127 M~t-Sldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~--kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dSi 203 (282)
T KOG0984|consen 127 MDT-SLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHS--KLSVIHRDVKPSNILINYDGQVKICDFGISGYLVDSI 203 (282)
T ss_pred hhh-hHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHH--HhhhhhccCCcceEEEccCCcEEEcccccceeehhhh
Confidence 964 66544322 1233468888888999999999999998 5689999999999999999999999999997765432
Q ss_pred CCcccccccccccccccccc----CCcCcccchhhHHHHHHHHHhCCCCCc
Q 011005 363 SNRTLLAGTYGYIAPELAYT----MVMTEKCDVYSFGVVTLEVLMGKHPRD 409 (496)
Q Consensus 363 ~~~~~~~gt~~y~aPE~~~~----~~~~~~~DvwslG~il~el~~g~~p~~ 409 (496)
..+...|-..|||||.+.. ..|+-++||||+|+++.||.+++.||+
T Consensus 204 -Akt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~ 253 (282)
T KOG0984|consen 204 -AKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYE 253 (282)
T ss_pred -HHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhcccccc
Confidence 2333456678999998764 478899999999999999999999986
No 395
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=100.00 E-value=2e-33 Score=251.82 Aligned_cols=260 Identities=27% Similarity=0.306 Sum_probs=196.5
Q ss_pred hCCCCcceeeecCCeeEEEEEe-CCCcEEEEEEcccch-hHHHHHHHHHHHHHHHhhcccccccccceeecCC------e
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSE-ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKK------C 276 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~------~ 276 (496)
.+|.-.+.+|.|.- .|..|.+ -.++.||+|++.... .....++..+|..++..++|+||++++.++.... .
T Consensus 17 ~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e 95 (369)
T KOG0665|consen 17 KRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQE 95 (369)
T ss_pred eeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHh
Confidence 46666777888888 6666643 368899999886532 2334567889999999999999999999996543 4
Q ss_pred EEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccc
Q 011005 277 MFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTAR 356 (496)
Q Consensus 277 ~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~ 356 (496)
.|+|||+|. ++|...+.- +++..++..|+.|++.|+.||| +.||+||||||+||++..++.+||.|||+|+
T Consensus 96 ~y~v~e~m~-~nl~~vi~~-----elDH~tis~i~yq~~~~ik~lh---s~~IihRdLkPsnivv~~~~~lKi~dfg~ar 166 (369)
T KOG0665|consen 96 VYLVMELMD-ANLCQVILM-----ELDHETISYILYQMLCGIKHLH---SAGIIHRDLKPSNIVVNSDCTLKILDFGLAR 166 (369)
T ss_pred HHHHHHhhh-hHHHHHHHH-----hcchHHHHHHHHHHHHHHHHHH---hcceeecccCcccceecchhheeeccchhhc
Confidence 789999995 588877772 6788999999999999999999 8899999999999999999999999999998
Q ss_pred cccCCCCCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccC---------CCCCC-------
Q 011005 357 LLHADSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLS---------SSSDP------- 420 (496)
Q Consensus 357 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~---------~~~~~------- 420 (496)
.-..+ ...+..+.|..|.|||++.+..+.+.+||||.||++.||++|+.-|....... +...+
T Consensus 167 ~e~~~-~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~ 245 (369)
T KOG0665|consen 167 TEDTD-FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQ 245 (369)
T ss_pred ccCcc-cccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhh
Confidence 76544 34566788999999999999999999999999999999999998875321110 00000
Q ss_pred -----------cc---hhHhhhcCCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHh
Q 011005 421 -----------KI---MLIDVLDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLIT 475 (496)
Q Consensus 421 -----------~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~ 475 (496)
.. ...+.+....-...............+++.+||..||++|.|++++|+|+++.
T Consensus 246 ~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~HPY~~ 314 (369)
T KOG0665|consen 246 PTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRHPYIK 314 (369)
T ss_pred HHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcCCeee
Confidence 00 00011111110111111112223467889999999999999999999999885
No 396
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.97 E-value=5.2e-33 Score=237.69 Aligned_cols=263 Identities=20% Similarity=0.265 Sum_probs=199.6
Q ss_pred HhCCCCcceeeecCCeeEEEEE-eCCCcEEEEEEcccchhHHHHHHHHHHHHHHHhhc-ccccccccceeecCC--eEEE
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQ-LPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVL-HRNIVKLYGYCLHKK--CMFL 279 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~--~~~l 279 (496)
.++|++.+++|+|.|++||.|. ..+.+.++||.++.-.. +.+.+|+++++.+. ||||+++++...++. ...+
T Consensus 37 ~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVkk----kKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaL 112 (338)
T KOG0668|consen 37 QDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVKK----KKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSL 112 (338)
T ss_pred cchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHHH----HHHHHHHHHHHhccCCCCeeehhhhhcCccccCchh
Confidence 4689999999999999999995 56788999999987553 67899999999997 999999999998754 5789
Q ss_pred EEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCC-CCeEEccccccccc
Q 011005 280 IYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSK-LEAFVADFGTARLL 358 (496)
Q Consensus 280 V~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~-~~~kl~Dfg~~~~~ 358 (496)
|+||.++.+...+.. .++.-++...+.+++.||.||| +.||+|||+||.|++++.. -.++|+|+|+|.++
T Consensus 113 iFE~v~n~Dfk~ly~------tl~d~dIryY~~elLkALdyCH---S~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFY 183 (338)
T KOG0668|consen 113 IFEYVNNTDFKQLYP------TLTDYDIRYYIYELLKALDYCH---SMGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFY 183 (338)
T ss_pred HhhhhccccHHHHhh------hhchhhHHHHHHHHHHHHhHHH---hcCcccccCCcceeeechhhceeeeeecchHhhc
Confidence 999998866654433 5677788899999999999999 8899999999999999865 56899999999988
Q ss_pred cCCCCCccccccccccccccccccC-CcCcccchhhHHHHHHHHHhCCCCCccccccCCC--------------------
Q 011005 359 HADSSNRTLLAGTYGYIAPELAYTM-VMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSS-------------------- 417 (496)
Q Consensus 359 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~-------------------- 417 (496)
... ......+.+..|..||.+.+- .|+..-|+|||||++..|+..+-||-.......+
T Consensus 184 Hp~-~eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY 262 (338)
T KOG0668|consen 184 HPG-KEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKY 262 (338)
T ss_pred CCC-ceeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHH
Confidence 654 344556778889999998764 5788999999999999999999997321110000
Q ss_pred -CCCcchhHhhhcCCCCCCCCh----h-HHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCCC
Q 011005 418 -SDPKIMLIDVLDQRLPPPVDR----K-VIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTPL 480 (496)
Q Consensus 418 -~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~~ 480 (496)
-..+.....+++.....++.. . ......+..+|+.+.|..|-.+|+|++|.+.|+++......
T Consensus 263 ~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~HpyF~~~~~~ 331 (338)
T KOG0668|consen 263 QIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAHPYFAPVREA 331 (338)
T ss_pred ccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcCchHHHHHHH
Confidence 000001111111111111100 0 00112457789999999999999999999999999765444
No 397
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=3e-33 Score=245.15 Aligned_cols=262 Identities=26% Similarity=0.305 Sum_probs=193.0
Q ss_pred CCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccc-hhHHHHHHHHHHHHHHHhhcccccccccceeecCC-----eEE
Q 011005 206 DFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTS-EELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKK-----CMF 278 (496)
Q Consensus 206 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-----~~~ 278 (496)
+.+..+.||.|+||.||.+.++ +|+.||.|++..- .+....+.+.+|++++..++|.|++..++...... ..|
T Consensus 54 Di~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiY 133 (449)
T KOG0664|consen 54 DIQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELY 133 (449)
T ss_pred cCCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHH
Confidence 3455677999999999999764 7999999998653 23445678899999999999999999988776543 357
Q ss_pred EEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccc
Q 011005 279 LIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLL 358 (496)
Q Consensus 279 lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 358 (496)
+++|.|.. +|..++..-. .++...+.-+.+||++||.||| +.+|.||||||.|.|++.+..+||||||+++..
T Consensus 134 V~TELmQS-DLHKIIVSPQ---~Ls~DHvKVFlYQILRGLKYLH---sA~ILHRDIKPGNLLVNSNCvLKICDFGLARve 206 (449)
T KOG0664|consen 134 VLTELMQS-DLHKIIVSPQ---ALTPDHVKVFVYQILRGLKYLH---TANILHRDIKPGNLLVNSNCILKICDFGLARTW 206 (449)
T ss_pred HHHHHHHh-hhhheeccCC---CCCcchhhhhHHHHHhhhHHHh---hcchhhccCCCccEEeccCceEEeccccccccc
Confidence 88888854 6776665433 5777777788999999999999 889999999999999999999999999999876
Q ss_pred cCCCCC-ccccccccccccccccccC-CcCcccchhhHHHHHHHHHhCCCCCccccccC---------CCCCCcc-----
Q 011005 359 HADSSN-RTLLAGTYGYIAPELAYTM-VMTEKCDVYSFGVVTLEVLMGKHPRDILSSLS---------SSSDPKI----- 422 (496)
Q Consensus 359 ~~~~~~-~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~el~~g~~p~~~~~~~~---------~~~~~~~----- 422 (496)
..+... .+..+-|..|+|||+++|. .|+.+.||||.|||+.|++..+.-|+..++.. .....+.
T Consensus 207 e~d~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~AC 286 (449)
T KOG0664|consen 207 DQRDRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYAC 286 (449)
T ss_pred chhhhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHh
Confidence 544322 3345678899999999986 68999999999999999999888876443321 0000000
Q ss_pred --hhHhhhcCCCCCCCCh------hHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHH
Q 011005 423 --MLIDVLDQRLPPPVDR------KVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLI 474 (496)
Q Consensus 423 --~~~~~~~~~~~~~~~~------~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~ 474 (496)
....+++.....+... ...........+..+++..||++|.+..+.+.|+..
T Consensus 287 EGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~~ 346 (449)
T KOG0664|consen 287 EGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRYL 346 (449)
T ss_pred hhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhcccccc
Confidence 0111222111111100 000111234567778999999999999999998764
No 398
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.97 E-value=1.1e-31 Score=257.43 Aligned_cols=198 Identities=24% Similarity=0.372 Sum_probs=170.1
Q ss_pred HhCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchhH--HH-----HHHHHHHHHHHHhhc---ccccccccceee
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEEL--AF-----IKSFKNEAQVLSQVL---HRNIVKLYGYCL 272 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~-----~~~~~~e~~~l~~l~---h~niv~~~~~~~ 272 (496)
..+|+..+.+|+|+||.|+.|.++ +...|+||.+.+..-. .+ ...+--|+.+|+.++ |+||++++++|+
T Consensus 560 ~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFE 639 (772)
T KOG1152|consen 560 FSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFE 639 (772)
T ss_pred cccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheee
Confidence 456899999999999999999776 5667899988765311 11 122456999999997 999999999999
Q ss_pred cCCeEEEEEEec-CCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEcc
Q 011005 273 HKKCMFLIYEYM-ERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVAD 351 (496)
Q Consensus 273 ~~~~~~lV~e~~-~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~D 351 (496)
+++.+|++||-. +|-+|++++.... .+++.++..|++||+.|+++|| +.||+|||||-+||.++.+|.+||+|
T Consensus 640 ddd~yyl~te~hg~gIDLFd~IE~kp---~m~E~eAk~IFkQV~agi~hlh---~~~ivhrdikdenvivd~~g~~klid 713 (772)
T KOG1152|consen 640 DDDYYYLETEVHGEGIDLFDFIEFKP---RMDEPEAKLIFKQVVAGIKHLH---DQGIVHRDIKDENVIVDSNGFVKLID 713 (772)
T ss_pred cCCeeEEEecCCCCCcchhhhhhccC---ccchHHHHHHHHHHHhcccccc---ccCceecccccccEEEecCCeEEEee
Confidence 999999999985 4568888887655 7889999999999999999999 78999999999999999999999999
Q ss_pred ccccccccCCCCCccccccccccccccccccCCcC-cccchhhHHHHHHHHHhCCCCCc
Q 011005 352 FGTARLLHADSSNRTLLAGTYGYIAPELAYTMVMT-EKCDVYSFGVVTLEVLMGKHPRD 409 (496)
Q Consensus 352 fg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DvwslG~il~el~~g~~p~~ 409 (496)
||.+...... ....++||..|.|||++.|..|- ..-|||++|++||.++....||-
T Consensus 714 fgsaa~~ksg--pfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 714 FGSAAYTKSG--PFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred ccchhhhcCC--CcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence 9999876433 35668999999999999999885 56899999999999999998873
No 399
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.97 E-value=5.7e-30 Score=232.76 Aligned_cols=212 Identities=35% Similarity=0.581 Sum_probs=184.7
Q ss_pred eeecCCeeEEEEEeCC-CcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEecCCCChhh
Q 011005 213 IGTGGYGSVYKAQLPN-GKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEYMERGSLFC 291 (496)
Q Consensus 213 lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~~~~g~L~~ 291 (496)
||+|++|.||++...+ ++.+++|.+...........+.+|+..++.+.|++++++++++......++++|++.+++|.+
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~ 80 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD 80 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence 6899999999998754 899999999876543234678999999999999999999999999999999999999999999
Q ss_pred hhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecC-CCCeEEccccccccccCCCCCcccccc
Q 011005 292 NLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNS-KLEAFVADFGTARLLHADSSNRTLLAG 370 (496)
Q Consensus 292 ~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~-~~~~kl~Dfg~~~~~~~~~~~~~~~~g 370 (496)
++.... ..++...+..++.+++.++.+|| ..+++|+||+|.||+++. ++.++|+|||.+..............+
T Consensus 81 ~~~~~~--~~~~~~~~~~~~~~l~~~l~~lh---~~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~ 155 (215)
T cd00180 81 LLKENE--GKLSEDEILRILLQILEGLEYLH---SNGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKSLLKTIVG 155 (215)
T ss_pred HHHhcc--CCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcchhhcccC
Confidence 987643 25789999999999999999999 779999999999999999 899999999999876543322333557
Q ss_pred ccccccccccccC-CcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHHHHHHHHHH
Q 011005 371 TYGYIAPELAYTM-VMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVIRDILLIST 449 (496)
Q Consensus 371 t~~y~aPE~~~~~-~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 449 (496)
...|++||..... .++.++|+|++|++++++ ..+.+
T Consensus 156 ~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l-------------------------------------------~~~~~ 192 (215)
T cd00180 156 TPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL-------------------------------------------PELKD 192 (215)
T ss_pred CCCccChhHhcccCCCCchhhhHHHHHHHHHH-------------------------------------------HHHHH
Confidence 7899999999887 888999999999999999 34778
Q ss_pred HHHhcccCCCCCCCCHHHHHHHH
Q 011005 450 VSFACLQSNPKSRPTMQSVSQEF 472 (496)
Q Consensus 450 li~~cl~~dP~~Rps~~evl~~~ 472 (496)
++.+|++.+|++||++.++++++
T Consensus 193 ~l~~~l~~~p~~R~~~~~l~~~~ 215 (215)
T cd00180 193 LIRKMLQKDPEKRPSAKEILEHL 215 (215)
T ss_pred HHHHHhhCCcccCcCHHHHhhCC
Confidence 99999999999999999998763
No 400
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.97 E-value=4e-32 Score=264.44 Aligned_cols=259 Identities=27% Similarity=0.411 Sum_probs=211.8
Q ss_pred HhCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEE
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYE 282 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e 282 (496)
.++|+....+|.|.||.||||+++ .++..|+|.++-....+ .+....|+-+++..+|+|||.+++.+...+..|++||
T Consensus 14 ~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd-~~~iqqei~~~~dc~h~nivay~gsylr~dklwicME 92 (829)
T KOG0576|consen 14 QDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDD-FSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICME 92 (829)
T ss_pred ccchhheeeecCCcccchhhhcccccCchhhheeeeccCCcc-ccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEE
Confidence 467999999999999999999764 68899999987654332 3556789999999999999999999999999999999
Q ss_pred ecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCC
Q 011005 283 YMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADS 362 (496)
Q Consensus 283 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 362 (496)
||.||+|.+.-+... .+++.++...++...+|+.||| +.|-+|||||-.||++++.|.+|+.|||.+-.+...-
T Consensus 93 ycgggslQdiy~~Tg---plselqiayvcRetl~gl~ylh---s~gk~hRdiKGanilltd~gDvklaDfgvsaqitati 166 (829)
T KOG0576|consen 93 YCGGGSLQDIYHVTG---PLSELQIAYVCRETLQGLKYLH---SQGKIHRDIKGANILLTDEGDVKLADFGVSAQITATI 166 (829)
T ss_pred ecCCCcccceeeecc---cchhHHHHHHHhhhhccchhhh---cCCcccccccccceeecccCceeecccCchhhhhhhh
Confidence 999999998887655 7888999999999999999999 7789999999999999999999999999998776555
Q ss_pred CCccccccccccccccccc---cCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCC-CCCCh
Q 011005 363 SNRTLLAGTYGYIAPELAY---TMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLP-PPVDR 438 (496)
Q Consensus 363 ~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 438 (496)
.....+.||+.|||||+.. .+.|...+|||+.|++..|+-.-++|.-...++ ...-.+.+... ++.-.
T Consensus 167 ~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpm--------r~l~LmTkS~~qpp~lk 238 (829)
T KOG0576|consen 167 AKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPM--------RALFLMTKSGFQPPTLK 238 (829)
T ss_pred hhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchH--------HHHHHhhccCCCCCccc
Confidence 5566688999999999764 567899999999999999999888884332221 11122222222 22222
Q ss_pred hHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhcc
Q 011005 439 KVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRK 477 (496)
Q Consensus 439 ~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~ 477 (496)
....+...+-+|++.|+..+|.+||+++.+++|+|....
T Consensus 239 Dk~kws~~fh~fvK~altknpKkRptaeklL~h~fvs~~ 277 (829)
T KOG0576|consen 239 DKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQHPFVSQT 277 (829)
T ss_pred CCccchHHHHHHHHHHhcCCCccCCChhhheeceeeccc
Confidence 233445568899999999999999999999999887655
No 401
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.5e-30 Score=228.08 Aligned_cols=265 Identities=22% Similarity=0.307 Sum_probs=194.2
Q ss_pred HHhCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchhHHHHHHHHHHHHHHHhhc-ccccccccc-eeecCCeEEE
Q 011005 203 ATEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVL-HRNIVKLYG-YCLHKKCMFL 279 (496)
Q Consensus 203 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~-~~~~~~~~~l 279 (496)
..+.|.+.+.||+|.||.+-++.++ ..+.+++|-++..... .++|.+|...--.+. |.||+.-|+ .|+..+.+++
T Consensus 22 l~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~tt--~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF 99 (378)
T KOG1345|consen 22 LEDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQTT--QADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVF 99 (378)
T ss_pred hhhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcchhh--HHHHHHHhccceeeccchhhhHHHHHHhhcCceEEE
Confidence 4578999999999999999999775 5678899988876543 377888887766664 899998886 5566778899
Q ss_pred EEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEec--CCCCeEEcccccccc
Q 011005 280 IYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLN--SKLEAFVADFGTARL 357 (496)
Q Consensus 280 V~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~--~~~~~kl~Dfg~~~~ 357 (496)
++||++.|+|..-+... .+.+.....++.|++.|+.|+| ++.+||||||.+|||+- +...+|+||||..+.
T Consensus 100 ~qE~aP~gdL~snv~~~----GigE~~~K~v~~ql~SAi~fMH---sknlVHRdlK~eNiLif~~df~rvKlcDFG~t~k 172 (378)
T KOG1345|consen 100 VQEFAPRGDLRSNVEAA----GIGEANTKKVFAQLLSAIEFMH---SKNLVHRDLKAENILIFDADFYRVKLCDFGLTRK 172 (378)
T ss_pred eeccCccchhhhhcCcc----cccHHHHHHHHHHHHHHHHHhh---ccchhhcccccceEEEecCCccEEEeeecccccc
Confidence 99999999998877664 4677888899999999999999 88999999999999993 335799999999875
Q ss_pred ccCCCCCccccccccccccccccccC-----CcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCC
Q 011005 358 LHADSSNRTLLAGTYGYIAPELAYTM-----VMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRL 432 (496)
Q Consensus 358 ~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (496)
....- ...-.+..|.+||..... ...+.+|||.||+++|.++||+.||+-.... ++.........++.
T Consensus 173 ~g~tV---~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~----d~~Y~~~~~w~~rk 245 (378)
T KOG1345|consen 173 VGTTV---KYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIM----DKPYWEWEQWLKRK 245 (378)
T ss_pred cCcee---hhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhcc----CchHHHHHHHhccc
Confidence 43211 112234568999976533 3467899999999999999999999844322 22222222222333
Q ss_pred CCCCChhHHHHHHHHHHHHHhcccCCCCCC---CCHHHHHHHHHHhccCCCCCc
Q 011005 433 PPPVDRKVIRDILLISTVSFACLQSNPKSR---PTMQSVSQEFLITRKTPLVKH 483 (496)
Q Consensus 433 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~R---ps~~evl~~~~~~~~~~~~~~ 483 (496)
.+........-...+..+..+-+.++|++| .++.......|.-......+.
T Consensus 246 ~~~~P~~F~~fs~~a~r~Fkk~lt~~~~drcki~~~kk~rk~~w~E~~i~t~k~ 299 (378)
T KOG1345|consen 246 NPALPKKFNPFSEKALRLFKKSLTPRFKDRCKIWTAKKMRKCLWKEKLIKTVKR 299 (378)
T ss_pred CccCchhhcccCHHHHHHHHHhcCCcccccchhHHHHHHHHHHHHHhhhccccC
Confidence 222222222223346678889999999999 566666666776554444333
No 402
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.96 E-value=2.8e-30 Score=240.24 Aligned_cols=267 Identities=24% Similarity=0.297 Sum_probs=198.9
Q ss_pred HHHHHHhCCCCcceeeecCCeeEEEEEeC----CCcEEEEEEcccchhHHHHHHHHHHHHHHHhhc-ccccccccceeec
Q 011005 199 DLIEATEDFDIRYCIGTGGYGSVYKAQLP----NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVL-HRNIVKLYGYCLH 273 (496)
Q Consensus 199 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~ 273 (496)
+.....+.|...++||+|.|++||+|.+. .++.||+|.+...... ..+.+|++++..+. +.||+++.+++..
T Consensus 30 ~~p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~p---~ri~~El~~L~~~gG~~ni~~~~~~~rn 106 (418)
T KOG1167|consen 30 DIPFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSSP---SRILNELEMLYRLGGSDNIIKLNGCFRN 106 (418)
T ss_pred hhhhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccCc---hHHHHHHHHHHHhccchhhhcchhhhcc
Confidence 34445678999999999999999999543 4778999999776543 45789999999995 8999999999999
Q ss_pred CCeEEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCC-CCeEEccc
Q 011005 274 KKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSK-LEAFVADF 352 (496)
Q Consensus 274 ~~~~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~-~~~kl~Df 352 (496)
++...+|+||++...-.++.. .++..++..+++.+..||.++| ..|||||||||+|++.+.. +.-.|+||
T Consensus 107 nd~v~ivlp~~~H~~f~~l~~------~l~~~~i~~Yl~~ll~Al~~~h---~~GIvHRDiKpsNFL~n~~t~rg~LvDF 177 (418)
T KOG1167|consen 107 NDQVAIVLPYFEHDRFRDLYR------SLSLAEIRWYLRNLLKALAHLH---KNGIVHRDIKPSNFLYNRRTQRGVLVDF 177 (418)
T ss_pred CCeeEEEecccCccCHHHHHh------cCCHHHHHHHHHHHHHHhhhhh---ccCccccCCCccccccccccCCceEEec
Confidence 999999999999988877776 4678899999999999999999 8899999999999999865 66789999
Q ss_pred cccccccCCC--------------C------------------C------------cccccccccccccccccc-CCcCc
Q 011005 353 GTARLLHADS--------------S------------------N------------RTLLAGTYGYIAPELAYT-MVMTE 387 (496)
Q Consensus 353 g~~~~~~~~~--------------~------------------~------------~~~~~gt~~y~aPE~~~~-~~~~~ 387 (496)
|+|....... . . .....||++|+|||++.. ...++
T Consensus 178 gLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~Qtt 257 (418)
T KOG1167|consen 178 GLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTT 257 (418)
T ss_pred hhHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCC
Confidence 9997321100 0 0 001359999999998764 56788
Q ss_pred ccchhhHHHHHHHHHhCCCCCcccccc-----------------------CC--CCC--CcchhHhhhcC-------CCC
Q 011005 388 KCDVYSFGVVTLEVLMGKHPRDILSSL-----------------------SS--SSD--PKIMLIDVLDQ-------RLP 433 (496)
Q Consensus 388 ~~DvwslG~il~el~~g~~p~~~~~~~-----------------------~~--~~~--~~~~~~~~~~~-------~~~ 433 (496)
++||||.|+|+.-+++++.||-....- .. ..+ ......+.... .+.
T Consensus 258 aiDiws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~ 337 (418)
T KOG1167|consen 258 AIDIWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIY 337 (418)
T ss_pred ccceeeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhcc
Confidence 999999999999999999997311100 00 000 00000000000 000
Q ss_pred C-CC---C-hhHH-HHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhcc
Q 011005 434 P-PV---D-RKVI-RDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRK 477 (496)
Q Consensus 434 ~-~~---~-~~~~-~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~ 477 (496)
. .. . .... .-+..+.+++.+|+..||.+|.|+++.|+|+|+...
T Consensus 338 ~~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkHpFF~~~ 387 (418)
T KOG1167|consen 338 KSRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKHPFFDEA 387 (418)
T ss_pred cccccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcCcCCcch
Confidence 0 00 0 0001 112357899999999999999999999999999743
No 403
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.96 E-value=4.1e-28 Score=223.21 Aligned_cols=198 Identities=34% Similarity=0.528 Sum_probs=171.4
Q ss_pred CCCcceeeecCCeeEEEEEeCC-CcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEecC
Q 011005 207 FDIRYCIGTGGYGSVYKAQLPN-GKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEYME 285 (496)
Q Consensus 207 ~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~~~ 285 (496)
|.+.+.||.|++|.||+|...+ ++.+++|.+.........+.+.+|++.+++++|+|++++++++......++++|+++
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCE 80 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccC
Confidence 5667889999999999998764 889999999875433245778899999999999999999999999899999999999
Q ss_pred CCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCC-CC
Q 011005 286 RGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADS-SN 364 (496)
Q Consensus 286 ~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~ 364 (496)
+++|.+++..... .+++..+..++.+++.++.+|| ..+++|+|++|+||+++.++.++|+|||.+....... ..
T Consensus 81 ~~~L~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~~ 155 (225)
T smart00221 81 GGDLFDYLRKKGG--KLSEEEARFYLRQILEALEYLH---SLGIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAAL 155 (225)
T ss_pred CCCHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCccccc
Confidence 9999999986542 1788999999999999999999 6799999999999999999999999999998775432 12
Q ss_pred cccccccccccccccc-ccCCcCcccchhhHHHHHHHHHhCCCCCc
Q 011005 365 RTLLAGTYGYIAPELA-YTMVMTEKCDVYSFGVVTLEVLMGKHPRD 409 (496)
Q Consensus 365 ~~~~~gt~~y~aPE~~-~~~~~~~~~DvwslG~il~el~~g~~p~~ 409 (496)
.....++..|++||.+ ....++.++|+|++|+++++|++|+.||.
T Consensus 156 ~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~ 201 (225)
T smart00221 156 LKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFS 201 (225)
T ss_pred ccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCcc
Confidence 2334577889999998 66778889999999999999999999995
No 404
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.95 E-value=9.4e-29 Score=267.61 Aligned_cols=201 Identities=19% Similarity=0.255 Sum_probs=145.6
Q ss_pred hhcc-ccccccccee-------ecCCeEEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCe
Q 011005 258 QVLH-RNIVKLYGYC-------LHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSI 329 (496)
Q Consensus 258 ~l~h-~niv~~~~~~-------~~~~~~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i 329 (496)
.++| +||++++++| ......+.++|++ +++|.+++.... ..+++.+++.++.||+.||+||| ++||
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH---~~gI 101 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNPD--RSVDAFECFHVFRQIVEIVNAAH---SQGI 101 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhccc--ccccHHHHHHHHHHHHHHHHHHH---hCCe
Confidence 4455 6888888887 2234567788877 569999997532 35899999999999999999999 7899
Q ss_pred EEeCCCCCceEecC-------------------CCCeEEccccccccccCCC----------------CCcccccccccc
Q 011005 330 IHRDISSNNILLNS-------------------KLEAFVADFGTARLLHADS----------------SNRTLLAGTYGY 374 (496)
Q Consensus 330 ~H~dlkp~Nil~~~-------------------~~~~kl~Dfg~~~~~~~~~----------------~~~~~~~gt~~y 374 (496)
+||||||+|||++. ++.+|++|||+++...... ......+||+.|
T Consensus 102 vHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y 181 (793)
T PLN00181 102 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWY 181 (793)
T ss_pred eeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcce
Confidence 99999999999954 4456677777765421100 001123578899
Q ss_pred ccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHHHHHHHHHHHHHhc
Q 011005 375 IAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVIRDILLISTVSFAC 454 (496)
Q Consensus 375 ~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 454 (496)
||||++.+..++.++|||||||++|||++|..|+.... ...........++.. .........++.+|
T Consensus 182 ~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~---------~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~ 248 (793)
T PLN00181 182 TSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKS---------RTMSSLRHRVLPPQI----LLNWPKEASFCLWL 248 (793)
T ss_pred EChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHH---------HHHHHHHHhhcChhh----hhcCHHHHHHHHHh
Confidence 99999999999999999999999999999988864211 011111111111111 11122345778899
Q ss_pred ccCCCCCCCCHHHHHHHHHHhcc
Q 011005 455 LQSNPKSRPTMQSVSQEFLITRK 477 (496)
Q Consensus 455 l~~dP~~Rps~~evl~~~~~~~~ 477 (496)
|+++|.+||++.|+++|+|+...
T Consensus 249 L~~~P~~Rps~~eil~h~~~~~~ 271 (793)
T PLN00181 249 LHPEPSCRPSMSELLQSEFINEP 271 (793)
T ss_pred CCCChhhCcChHHHhhchhhhhh
Confidence 99999999999999999999764
No 405
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.95 E-value=6.3e-27 Score=206.98 Aligned_cols=167 Identities=19% Similarity=0.113 Sum_probs=126.6
Q ss_pred CChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCCCcc
Q 011005 287 GSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRT 366 (496)
Q Consensus 287 g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 366 (496)
|+|.+++.... ..+++..++.++.|++.||.||| ..+ ||+||+++.++.+++ ||++.......
T Consensus 1 GsL~~~l~~~~--~~l~~~~~~~i~~qi~~~L~~lH---~~~------kp~Nil~~~~~~~~~--fG~~~~~~~~~---- 63 (176)
T smart00750 1 VSLADILEVRG--RPLNEEEIWAVCLQCLRALRELH---RQA------KSGNILLTWDGLLKL--DGSVAFKTPEQ---- 63 (176)
T ss_pred CcHHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHH---hcC------CcccEeEcCccceee--ccceEeecccc----
Confidence 68888887543 26899999999999999999999 445 999999999999999 99997664322
Q ss_pred ccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCC--ChhHHHHH
Q 011005 367 LLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPV--DRKVIRDI 444 (496)
Q Consensus 367 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 444 (496)
..|++.|+|||++.+..++.++|||||||++|||++|+.||..... ................. ........
T Consensus 64 -~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (176)
T smart00750 64 -SRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERE------LSAILEILLNGMPADDPRDRSNLESVS 136 (176)
T ss_pred -CCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccch------hcHHHHHHHHHhccCCccccccHHHHH
Confidence 2578999999999999999999999999999999999999863221 11111121111111100 00111111
Q ss_pred --HHHHHHHHhcccCCCCCCCCHHHHHHHHHHhcc
Q 011005 445 --LLISTVSFACLQSNPKSRPTMQSVSQEFLITRK 477 (496)
Q Consensus 445 --~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~ 477 (496)
..+.+++.+||+.||++||++.|+++|++....
T Consensus 137 ~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~~ 171 (176)
T smart00750 137 AARSFADFMRVCASRLPQRREAANHYLAHCRALFA 171 (176)
T ss_pred hhhhHHHHHHHHHhcccccccCHHHHHHHHHHHHH
Confidence 258899999999999999999999999998753
No 406
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.93 E-value=1.6e-25 Score=193.33 Aligned_cols=257 Identities=18% Similarity=0.255 Sum_probs=205.0
Q ss_pred HhCCCCcceeeecCCeeEEEE-EeCCCcEEEEEEcccchhHHHHHHHHHHHHHHHhhc-ccccccccceeecCCeEEEEE
Q 011005 204 TEDFDIRYCIGTGGYGSVYKA-QLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVL-HRNIVKLYGYCLHKKCMFLIY 281 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lV~ 281 (496)
.+.|.++++||.|+||.+|.| ...+|..||||.-..... ...+..|.++++.++ ..+|..+..+..++.+-.+||
T Consensus 14 ~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~---hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVM 90 (341)
T KOG1163|consen 14 GGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAK---HPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVM 90 (341)
T ss_pred ccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCC---CcchhHHHHHHHHhccCCCCchhhhhccccccceeee
Confidence 467999999999999999999 567899999998765432 245678999999997 578999999999999999999
Q ss_pred EecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCC---CCeEEccccccccc
Q 011005 282 EYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSK---LEAFVADFGTARLL 358 (496)
Q Consensus 282 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~---~~~kl~Dfg~~~~~ 358 (496)
+.+ |.||.+++.-... .++..+++-++-|++.-++|+| .++++||||||+|+|+.-+ ..+.++|||+|+.+
T Consensus 91 dLL-GPsLEdLfnfC~R--~ftmkTvLMLaDQml~RiEyvH---~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky 164 (341)
T KOG1163|consen 91 DLL-GPSLEDLFNFCSR--RFTMKTVLMLADQMLSRIEYVH---LRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKY 164 (341)
T ss_pred ecc-CccHHHHHHHHhh--hhhHHhHHHHHHHHHHHHHHHH---hhccccccCCccceeeccccccceEEEEeccchhhh
Confidence 988 7899998875543 6899999999999999999999 7899999999999999754 35789999999987
Q ss_pred cCCCCC-------ccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCC
Q 011005 359 HADSSN-------RTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQR 431 (496)
Q Consensus 359 ~~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 431 (496)
.+.... .....||..|.+-....+.+.+.+.|+=|+|.+|..+..|..||+.... .........+..+.
T Consensus 165 ~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka----~tk~QKyEkI~EkK 240 (341)
T KOG1163|consen 165 RDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKA----ATKKQKYEKISEKK 240 (341)
T ss_pred ccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccch----hhHHHHHHHHHHhh
Confidence 543222 2345799999999999999999999999999999999999999986543 22333444555556
Q ss_pred CCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHH
Q 011005 432 LPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFL 473 (496)
Q Consensus 432 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~ 473 (496)
+..+....+..-+.++.-.+.-|-..--++-|...-+.+-+.
T Consensus 241 ~s~~ie~LC~G~P~EF~myl~Y~R~L~F~E~Pdy~ylrqlFr 282 (341)
T KOG1163|consen 241 MSTPIEVLCKGFPAEFAMYLNYCRGLGFEEKPDYMYLRQLFR 282 (341)
T ss_pred cCCCHHHHhCCCcHHHHHHHHHHhhcCCCCCCcHHHHHHHHH
Confidence 665555555555556667777787777788888776655443
No 407
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.93 E-value=4e-26 Score=234.46 Aligned_cols=260 Identities=22% Similarity=0.282 Sum_probs=196.8
Q ss_pred CcceeeecCCeeEEEEEe-CCCcEEEEEEcc----cch-hHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEE
Q 011005 209 IRYCIGTGGYGSVYKAQL-PNGKVFALKKLH----TSE-ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYE 282 (496)
Q Consensus 209 ~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~----~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e 282 (496)
..+.+|.|++|.|+.+.. ...+..+.|.++ ... .......+..|+.+-..+.|+|++..+..+.+.....-+||
T Consensus 322 ~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~mE 401 (601)
T KOG0590|consen 322 PGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSME 401 (601)
T ss_pred ccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhhh
Confidence 456799999998887743 334444444433 222 22333347778888888999999999888887776666699
Q ss_pred ecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCC
Q 011005 283 YMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADS 362 (496)
Q Consensus 283 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 362 (496)
||++ +|+..+.... .+...++-.+++|+..|++|+| ..|+.|||+|++|++++.+|.+||+|||.+..+..+.
T Consensus 402 ~~~~-Dlf~~~~~~~---~~~~~e~~c~fKqL~~Gv~y~h---~~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~ 474 (601)
T KOG0590|consen 402 YCPY-DLFSLVMSNG---KLTPLEADCFFKQLLRGVKYLH---SMGLAHRDLKLENLLVTENGILKIIDFGAASVFRYPW 474 (601)
T ss_pred cccH-HHHHHHhccc---ccchhhhhHHHHHHHHHHHHHH---hcCceeccCccccEEEecCCceEEeecCcceeeccCc
Confidence 9999 9999988753 5777888889999999999999 8899999999999999999999999999998776544
Q ss_pred CC----ccccccccccccccccccCCcCc-ccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCC
Q 011005 363 SN----RTLLAGTYGYIAPELAYTMVMTE-KCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVD 437 (496)
Q Consensus 363 ~~----~~~~~gt~~y~aPE~~~~~~~~~-~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (496)
.. ....+|+..|+|||.+.+..|++ ..||||.|+++..|.+|+.||.......... .............+..
T Consensus 475 e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~---~~~~~~~~~~~~~~~~ 551 (601)
T KOG0590|consen 475 EKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSF---KTNNYSDQRNIFEGPN 551 (601)
T ss_pred chhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccch---hhhccccccccccChH
Confidence 32 34577999999999999999987 6899999999999999999998654422211 0001111111222222
Q ss_pred hhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccC
Q 011005 438 RKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKT 478 (496)
Q Consensus 438 ~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~ 478 (496)
......+.....++.+||++||.+|.|+++|++..|++.-.
T Consensus 552 ~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d~W~~~i~ 592 (601)
T KOG0590|consen 552 RLLSLLPRETRIIIYRMLQLDPTKRITIEQILNDEWIRSIE 592 (601)
T ss_pred HHHHhchhhHHHHHHHHccCChhheecHHHHhhChHhhhcc
Confidence 33334444577899999999999999999999999997643
No 408
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.92 E-value=1.4e-24 Score=195.99 Aligned_cols=254 Identities=18% Similarity=0.221 Sum_probs=200.7
Q ss_pred HhCCCCcceeeecCCeeEEEEE-eCCCcEEEEEEcccchhHHHHHHHHHHHHHHHhhc-ccccccccceeecCCeEEEEE
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQ-LPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVL-HRNIVKLYGYCLHKKCMFLIY 281 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lV~ 281 (496)
.-.|.+.++||+|.||+++.|. +-+++.||||.-....+ .-++..|+..++.+. .++|...+-+..++.+-.||+
T Consensus 27 G~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~---APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVi 103 (449)
T KOG1165|consen 27 GPHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKSE---APQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVI 103 (449)
T ss_pred cccceeccccccCcceeeecccccccCceEEEEeccccCC---cchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhh
Confidence 3479999999999999999994 45899999998655432 256788999999995 799999999999999999999
Q ss_pred EecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCC-----CeEEccccccc
Q 011005 282 EYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKL-----EAFVADFGTAR 356 (496)
Q Consensus 282 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~-----~~kl~Dfg~~~ 356 (496)
|.+ |.||.+++.-... .|+..++.-++.|++.-++|+| ++.+|+|||||+|+||...+ .+.++|||+|+
T Consensus 104 dLL-GPSLEDLFD~CgR--~FSvKTV~miA~Qmi~rie~vH---~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK 177 (449)
T KOG1165|consen 104 DLL-GPSLEDLFDLCGR--RFSVKTVAMIAKQMITRIEYVH---EKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAK 177 (449)
T ss_pred hhh-CcCHHHHHHHhcC--cccHHhHHHHHHHHHHHHHHHH---hcceeecccCccceeecCCCCCCCceEEEEeccchh
Confidence 988 7899999886543 7999999999999999999999 78999999999999997543 47899999999
Q ss_pred cccCCCCC-------ccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhc
Q 011005 357 LLHADSSN-------RTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLD 429 (496)
Q Consensus 357 ~~~~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 429 (496)
.+.++... .....||.+||+-....+.+.+.+.|.=|+|-+++.++-|..||+.+. ..........+=+
T Consensus 178 ~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLK----A~tnK~kYeKIGe 253 (449)
T KOG1165|consen 178 EYRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLK----ADTNKEKYEKIGE 253 (449)
T ss_pred hhcCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCcccccc----CcchHHHHHHhcc
Confidence 98765432 233569999999999999999999999999999999999999998653 2222333333333
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 011005 430 QRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQ 470 (496)
Q Consensus 430 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 470 (496)
++...+....+..-+..+..-+.-.-..+-.+-|..+-+..
T Consensus 254 ~Kr~T~i~~Lc~g~P~efa~Yl~yvR~L~F~E~PDYdylr~ 294 (449)
T KOG1165|consen 254 TKRSTPIEVLCEGFPEEFATYLRYVRRLDFFETPDYDYLRK 294 (449)
T ss_pred ccccCCHHHHHhcCHHHHHHHHHHHHhcCcccCCCHHHHHH
Confidence 44444444444444555666555566667777888765543
No 409
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.92 E-value=2.4e-24 Score=208.69 Aligned_cols=260 Identities=21% Similarity=0.215 Sum_probs=192.5
Q ss_pred CCCCcceeeecCCeeEEEEEeCCC--cEEEEEEcccchhHHHHHHHHHHHHHHHhhcc----ccccccccee-ecCCeEE
Q 011005 206 DFDIRYCIGTGGYGSVYKAQLPNG--KVFALKKLHTSEELAFIKSFKNEAQVLSQVLH----RNIVKLYGYC-LHKKCMF 278 (496)
Q Consensus 206 ~~~~~~~lg~G~~g~Vy~~~~~~~--~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h----~niv~~~~~~-~~~~~~~ 278 (496)
+|.+.+.||+|+||.||++..... ..+|+|........... .+..|..++..+.. +++..+++.. ..+...+
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~-~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~ 97 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPS-VLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNF 97 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCc-cchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeE
Confidence 799999999999999999976553 47888877654322222 57788999988873 6888999988 4777889
Q ss_pred EEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCC-----CCeEEcccc
Q 011005 279 LIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSK-----LEAFVADFG 353 (496)
Q Consensus 279 lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~-----~~~kl~Dfg 353 (496)
+||+.+ |.+|.++..... ...++..++..|+.|++.+|.++| +.|++||||||.|+.+... ..+.+.|||
T Consensus 98 iVM~l~-G~sL~dl~~~~~-~~~fs~~T~l~ia~q~l~~l~~lH---~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfG 172 (322)
T KOG1164|consen 98 IVMSLL-GPSLEDLRKRNP-PGRFSRKTVLRIAIQNLNALEDLH---SKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFG 172 (322)
T ss_pred EEEecc-CccHHHHHHhCC-CCCcCHhHHHHHHHHHHHHHHHHH---hcCcccCCcCHHHeeecCCCCcccceEEEEecC
Confidence 999977 789999886655 558999999999999999999999 8899999999999999865 358999999
Q ss_pred ccc--cccCCCC-------C-ccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcch
Q 011005 354 TAR--LLHADSS-------N-RTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIM 423 (496)
Q Consensus 354 ~~~--~~~~~~~-------~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~ 423 (496)
+++ .+..... . .....||..|+++....+...+.+.|+||++.++.++..|..||....... ....
T Consensus 173 lar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~----~~~~ 248 (322)
T KOG1164|consen 173 LARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTD----LKSK 248 (322)
T ss_pred CCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccc----hHHH
Confidence 998 3322211 1 223559999999999999999999999999999999999999996433211 1111
Q ss_pred hHhhhcCCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccC
Q 011005 424 LIDVLDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKT 478 (496)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~ 478 (496)
............. ....+..+.++...+-+.+...+|....+.+.+......
T Consensus 249 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~~~ 300 (322)
T KOG1164|consen 249 FEKDPRKLLTDRF---GDLKPEEFAKILEYIDSLDYEDKPDYEKLAELLKDVFDS 300 (322)
T ss_pred HHHHhhhhccccc---cCCChHHHHHHHHHhhccCCcCCCCHHHHHHHHHHHHHh
Confidence 1111111111110 001112344555555568999999999998886554443
No 410
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.92 E-value=9.7e-25 Score=210.49 Aligned_cols=164 Identities=18% Similarity=0.155 Sum_probs=128.5
Q ss_pred HHhCCCCcceeeecCCeeEEEEEeC--CCcEEEEEEcccc----hhHHHHHHHHHHHHHHHhhccccccc-ccceeecCC
Q 011005 203 ATEDFDIRYCIGTGGYGSVYKAQLP--NGKVFALKKLHTS----EELAFIKSFKNEAQVLSQVLHRNIVK-LYGYCLHKK 275 (496)
Q Consensus 203 ~~~~~~~~~~lg~G~~g~Vy~~~~~--~~~~vavK~~~~~----~~~~~~~~~~~e~~~l~~l~h~niv~-~~~~~~~~~ 275 (496)
..++|.+.+.||+|+||+||+|.++ +++.||||++... ........+.+|++++++++|+|+++ ++++ +
T Consensus 16 ~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~----~ 91 (365)
T PRK09188 16 LSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT----G 91 (365)
T ss_pred ccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc----C
Confidence 4578999999999999999999764 5778899986532 12233466899999999999999985 4432 3
Q ss_pred eEEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCC-CCCceEecCCCCeEEccccc
Q 011005 276 CMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDI-SSNNILLNSKLEAFVADFGT 354 (496)
Q Consensus 276 ~~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl-kp~Nil~~~~~~~kl~Dfg~ 354 (496)
..++||||++|++|.. .... . ...++.|++++|.||| .+||+|||| ||+|||++.++.++|+|||+
T Consensus 92 ~~~LVmE~~~G~~L~~-~~~~------~---~~~~~~~i~~aL~~lH---~~gIiHrDL~KP~NILv~~~~~ikLiDFGl 158 (365)
T PRK09188 92 KDGLVRGWTEGVPLHL-ARPH------G---DPAWFRSAHRALRDLH---RAGITHNDLAKPQNWLMGPDGEAAVIDFQL 158 (365)
T ss_pred CcEEEEEccCCCCHHH-hCcc------c---hHHHHHHHHHHHHHHH---HCCCeeCCCCCcceEEEcCCCCEEEEECcc
Confidence 5799999999999963 2111 1 1457889999999999 789999999 99999999999999999999
Q ss_pred cccccCCCCCc--------cccccccccccccccccC
Q 011005 355 ARLLHADSSNR--------TLLAGTYGYIAPELAYTM 383 (496)
Q Consensus 355 ~~~~~~~~~~~--------~~~~gt~~y~aPE~~~~~ 383 (496)
|+.+....... ....+++.|+|||.+...
T Consensus 159 A~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~ 195 (365)
T PRK09188 159 ASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTPR 195 (365)
T ss_pred ceecccCcchhhhhhhhhhhhhhccCccCCcccCChh
Confidence 99775443211 234577889999988654
No 411
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.92 E-value=9.7e-26 Score=198.00 Aligned_cols=248 Identities=21% Similarity=0.372 Sum_probs=187.4
Q ss_pred CCCcceeeecCCeeEEEEEeCCCcEEEEEEcccch-hHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEecC
Q 011005 207 FDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSE-ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEYME 285 (496)
Q Consensus 207 ~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~~~ 285 (496)
..+.-+|.+...|+.|+|+++ |..+++|++...+ .....+.|..|.-.++.+.||||.++++.|..+..+.++..||+
T Consensus 192 lnl~tkl~e~hsgelwrgrwq-gndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp 270 (448)
T KOG0195|consen 192 LNLITKLAESHSGELWRGRWQ-GNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMP 270 (448)
T ss_pred hhhhhhhccCCCccccccccc-CcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeecc
Confidence 344556899999999999995 5667778776543 33455778999999999999999999999999999999999999
Q ss_pred CCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCCCc
Q 011005 286 RGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNR 365 (496)
Q Consensus 286 ~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 365 (496)
.|+|+..++... ....+..++.+++.+|++|++|||+- ..-|..--+++..|++|++.+.+|.- +-+++ +.+.
T Consensus 271 ~gslynvlhe~t-~vvvd~sqav~faldiargmaflhsl-ep~ipr~~lns~hvmidedltarism-ad~kf----sfqe 343 (448)
T KOG0195|consen 271 FGSLYNVLHEQT-SVVVDHSQAVRFALDIARGMAFLHSL-EPMIPRFYLNSKHVMIDEDLTARISM-ADTKF----SFQE 343 (448)
T ss_pred chHHHHHHhcCc-cEEEecchHHHHHHHHHhhHHHHhhc-chhhhhhhcccceEEecchhhhheec-cccee----eeec
Confidence 999999999754 33567888999999999999999974 44444557999999999998877641 11111 1111
Q ss_pred cccccccccccccccccCCcC---cccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHHH
Q 011005 366 TLLAGTYGYIAPELAYTMVMT---EKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVIR 442 (496)
Q Consensus 366 ~~~~gt~~y~aPE~~~~~~~~---~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (496)
.....+|.||+||.+....-+ .++|+|||++++||+.|...||...+++.-.. ....+.++..+++..+.
T Consensus 344 ~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgm---kialeglrv~ippgis~---- 416 (448)
T KOG0195|consen 344 VGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGM---KIALEGLRVHIPPGISR---- 416 (448)
T ss_pred cccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhh---hhhhccccccCCCCccH----
Confidence 223457899999998876543 47999999999999999999998765532211 12233444455554443
Q ss_pred HHHHHHHHHHhcccCCCCCCCCHHHHHHHH
Q 011005 443 DILLISTVSFACLQSNPKSRPTMQSVSQEF 472 (496)
Q Consensus 443 ~~~~l~~li~~cl~~dP~~Rps~~evl~~~ 472 (496)
.+.+|+.-|+..||.+||.++.++--+
T Consensus 417 ---hm~klm~icmnedpgkrpkfdmivpil 443 (448)
T KOG0195|consen 417 ---HMNKLMNICMNEDPGKRPKFDMIVPIL 443 (448)
T ss_pred ---HHHHHHHHHhcCCCCcCCCcceehhhH
Confidence 345677789999999999999886544
No 412
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.90 E-value=2.1e-22 Score=196.53 Aligned_cols=262 Identities=30% Similarity=0.406 Sum_probs=200.2
Q ss_pred CCCcceeeecCCeeEEEEEeCCCcEEEEEEcccchhHH--HHHHHHHHHHHHHhhccc-ccccccceeecCCeEEEEEEe
Q 011005 207 FDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEELA--FIKSFKNEAQVLSQVLHR-NIVKLYGYCLHKKCMFLIYEY 283 (496)
Q Consensus 207 ~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--~~~~~~~e~~~l~~l~h~-niv~~~~~~~~~~~~~lV~e~ 283 (496)
|.+.+.||.|+||.||++... ..+++|.+....... ....+.+|+.+++.+.|+ +++++.+.+......++++++
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 79 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEY 79 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEec
Confidence 667788999999999999876 888999987755332 467889999999999988 799999999877778999999
Q ss_pred cCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCC-CeEEccccccccccCCC
Q 011005 284 MERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKL-EAFVADFGTARLLHADS 362 (496)
Q Consensus 284 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~-~~kl~Dfg~~~~~~~~~ 362 (496)
+.++++.+.+........++......++.|++.++.|+| ..+++|||+||+||+++..+ .++++|||.++......
T Consensus 80 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H---~~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~ 156 (384)
T COG0515 80 VDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLH---SKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPG 156 (384)
T ss_pred CCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeeecCCCCeEEEeccCcceecCCCC
Confidence 999999966665432125788889999999999999999 77899999999999999998 79999999998654433
Q ss_pred C------Ccccccccccccccccccc---CCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCC
Q 011005 363 S------NRTLLAGTYGYIAPELAYT---MVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLP 433 (496)
Q Consensus 363 ~------~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (496)
. ......|+..|+|||.+.+ ..+....|+||+|++++++++|..||...... .........+.....
T Consensus 157 ~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~----~~~~~~~~~~~~~~~ 232 (384)
T COG0515 157 STSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNS----SATSQTLKIILELPT 232 (384)
T ss_pred ccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCcc----ccHHHHHHHHHhcCC
Confidence 2 2355679999999999988 57888999999999999999999996533210 001111111111111
Q ss_pred C----CCChhH-HHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhcc
Q 011005 434 P----PVDRKV-IRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRK 477 (496)
Q Consensus 434 ~----~~~~~~-~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~ 477 (496)
+ ...... ......+.+++.+|+..+|..|.+..+...+.+....
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~ 281 (384)
T COG0515 233 PSLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSHDLLAHL 281 (384)
T ss_pred cccccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhchHhhCc
Confidence 1 111100 1112346788889999999999999998887544443
No 413
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.89 E-value=2.5e-24 Score=221.07 Aligned_cols=246 Identities=20% Similarity=0.278 Sum_probs=181.6
Q ss_pred CCCCcceeeecCCeeEEEEEeCCCcEEEEEEcccchhHHHHHHH---HHHHHHHHhhcccccccccceeecCCeEEEEEE
Q 011005 206 DFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSF---KNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYE 282 (496)
Q Consensus 206 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~---~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e 282 (496)
++...+.||.+.|=.|.+|++.+|. |+||++.+....-..+.+ .+|++ ...++|||++++.-+-...+..|||-+
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~kAAylvRq 101 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVTDKAAYLVRQ 101 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHhhHHHHHHHH
Confidence 5677888999999999999998887 889998765533223333 34444 445589999999988888888889999
Q ss_pred ecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEcccccccccc--C
Q 011005 283 YMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLH--A 360 (496)
Q Consensus 283 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~--~ 360 (496)
|..+ +|+|.+.... -+...+...|+.|++.|+..+| ..||+|||||.+|||++.-..+.|+||..-+..- .
T Consensus 102 yvkh-nLyDRlSTRP---FL~~iEKkWiaFQLL~al~qcH---~~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPe 174 (1431)
T KOG1240|consen 102 YVKH-NLYDRLSTRP---FLVLIEKKWIAFQLLKALSQCH---KLGVCHGDIKSENILITSWNWLYLTDFASFKPTYLPE 174 (1431)
T ss_pred HHhh-hhhhhhccch---HHHHHHHHHHHHHHHHHHHHHH---HcCccccccccceEEEeeechhhhhcccccCCccCCC
Confidence 9865 8999988654 5778888999999999999999 8899999999999999999999999998765321 1
Q ss_pred CC-CCcc----ccccccccccccccccC-----------CcCcccchhhHHHHHHHHHh-CCCCCccccccCCCCCCcch
Q 011005 361 DS-SNRT----LLAGTYGYIAPELAYTM-----------VMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSSDPKIM 423 (496)
Q Consensus 361 ~~-~~~~----~~~gt~~y~aPE~~~~~-----------~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~~~~~~ 423 (496)
++ .... +...-.+|.|||.+... ..+++.||||+||++.||++ |++||.....+.-.......
T Consensus 175 DNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LSQL~aYr~~~~~~ 254 (1431)
T KOG1240|consen 175 DNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLSQLLAYRSGNADD 254 (1431)
T ss_pred CCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHHHHHhHhccCccC
Confidence 11 1111 11233479999987652 15678999999999999987 78888643322111111111
Q ss_pred hHhhhcCCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 011005 424 LIDVLDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQE 471 (496)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 471 (496)
....+.+ +.. ..+.+++..|++.||++|.++++.|+.
T Consensus 255 ~e~~Le~-Ied----------~~~Rnlil~Mi~rdPs~RlSAedyL~~ 291 (1431)
T KOG1240|consen 255 PEQLLEK-IED----------VSLRNLILSMIQRDPSKRLSAEDYLQK 291 (1431)
T ss_pred HHHHHHh-CcC----------ccHHHHHHHHHccCchhccCHHHHHHh
Confidence 1122111 111 136788999999999999999999987
No 414
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.88 E-value=1.3e-22 Score=181.83 Aligned_cols=190 Identities=13% Similarity=0.173 Sum_probs=143.2
Q ss_pred ceeeecCCccccHHHHHH--HHhCCCCcceeeecCCeeEEEEEeCCCcEEEEEEcccchh--HHHHHH------HHHHHH
Q 011005 185 VFSIWNYDGRIVYEDLIE--ATEDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEE--LAFIKS------FKNEAQ 254 (496)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~------~~~e~~ 254 (496)
.+.++.......|.++.. ..++|...+.+|.|+||.||.+.. ++..+|+|.++.... ...... +.+|+.
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~l~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~ 87 (232)
T PRK10359 9 GYTVFYKDNDNKYKEIFDDFLSYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIV 87 (232)
T ss_pred ceEEEecCCcccHHHHHHHHhhCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHH
Confidence 344555555544554433 468999999999999999999866 577899999975432 222222 679999
Q ss_pred HHHhhcccccccccceeecC--------CeEEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCC
Q 011005 255 VLSQVLHRNIVKLYGYCLHK--------KCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCS 326 (496)
Q Consensus 255 ~l~~l~h~niv~~~~~~~~~--------~~~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~ 326 (496)
.+.++.|++|..+.+++... ...++||||++|.+|.+... ++. ....+++.++..+| .
T Consensus 88 ~l~rL~~~GI~~~~d~~~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~~-------~~~----~~~~~i~~~l~~lH---~ 153 (232)
T PRK10359 88 QTDRVRSEGLASLNDFYLLAERKTLRYAHTYIMLIEYIEGVELNDMPE-------ISE----DVKAKIKASIESLH---Q 153 (232)
T ss_pred HHHHHHHCCCCcceEeeeecccccccccCCeEEEEEEECCccHHHhhh-------ccH----HHHHHHHHHHHHHH---H
Confidence 99999999999998886543 35789999999999977632 222 24569999999999 7
Q ss_pred CCeEEeCCCCCceEecCCCCeEEccccccccccCCCCCccccccccccccccccccCCcCcccchhhHHHHHHHHH
Q 011005 327 PSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVL 402 (496)
Q Consensus 327 ~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~ 402 (496)
.|++|||++|+||++++++ ++++|||..+....+... ..+.....+..++|+||||+++..+.
T Consensus 154 ~gi~H~Dikp~Nili~~~g-i~liDfg~~~~~~e~~a~------------d~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 154 HGMVSGDPHKGNFIVSKNG-LRIIDLSGKRCTAQRKAK------------DRIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred cCCccCCCChHHEEEeCCC-EEEEECCCcccccchhhH------------HHHHHHhHhcccccccceeEeehHHH
Confidence 8999999999999999988 999999988655322111 11344556778999999999987765
No 415
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.88 E-value=3.3e-22 Score=177.60 Aligned_cols=140 Identities=20% Similarity=0.240 Sum_probs=108.9
Q ss_pred cceeeecCCeeEEEEEeCCCcEEEEEEcccchhH--H-----------------------HHHHHHHHHHHHHhhccccc
Q 011005 210 RYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEEL--A-----------------------FIKSFKNEAQVLSQVLHRNI 264 (496)
Q Consensus 210 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~-----------------------~~~~~~~e~~~l~~l~h~ni 264 (496)
...||+|++|.||+|..++|+.||||+++..... . .......|++.+.++.++++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v 81 (190)
T cd05147 2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI 81 (190)
T ss_pred CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 4679999999999998889999999999754210 0 01123459999999998887
Q ss_pred ccccceeecCCeEEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHH-HhCCCCCeEEeCCCCCceEecC
Q 011005 265 VKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYL-HHDCSPSIIHRDISSNNILLNS 343 (496)
Q Consensus 265 v~~~~~~~~~~~~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~l-h~~~~~~i~H~dlkp~Nil~~~ 343 (496)
.....+... ..++||||++|+++....... ..++...+..++.|++.+|.++ | ..||+||||||+||++++
T Consensus 82 ~~p~~~~~~--~~~iVmE~i~g~~l~~~~~~~---~~~~~~~~~~i~~qi~~~L~~l~H---~~giiHrDlkP~NIli~~ 153 (190)
T cd05147 82 PCPEPILLK--SHVLVMEFIGDDGWAAPRLKD---APLSESKARELYLQVIQIMRILYQ---DCRLVHADLSEYNLLYHD 153 (190)
T ss_pred CCCcEEEec--CCEEEEEEeCCCCCcchhhhc---CCCCHHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEEC
Confidence 544433222 237999999988775443222 2578899999999999999999 6 679999999999999984
Q ss_pred CCCeEEccccccccc
Q 011005 344 KLEAFVADFGTARLL 358 (496)
Q Consensus 344 ~~~~kl~Dfg~~~~~ 358 (496)
+.++|+|||+|...
T Consensus 154 -~~v~LiDFG~a~~~ 167 (190)
T cd05147 154 -GKLYIIDVSQSVEH 167 (190)
T ss_pred -CcEEEEEccccccC
Confidence 78999999999754
No 416
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.86 E-value=6.4e-21 Score=170.11 Aligned_cols=141 Identities=22% Similarity=0.296 Sum_probs=110.6
Q ss_pred cceeeecCCeeEEEEEeCCCcEEEEEEcccchhH-------------------------HHHHHHHHHHHHHHhhccccc
Q 011005 210 RYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEEL-------------------------AFIKSFKNEAQVLSQVLHRNI 264 (496)
Q Consensus 210 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-------------------------~~~~~~~~e~~~l~~l~h~ni 264 (496)
...||+|++|.||+|...+|+.||||.++..... .......+|...+.++.|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 81 (190)
T cd05145 2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV 81 (190)
T ss_pred CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 4679999999999998878999999998764210 001234678999999999987
Q ss_pred ccccceeecCCeEEEEEEecCCCChhhh-hhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecC
Q 011005 265 VKLYGYCLHKKCMFLIYEYMERGSLFCN-LHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNS 343 (496)
Q Consensus 265 v~~~~~~~~~~~~~lV~e~~~~g~L~~~-l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~ 343 (496)
.....+.... .++||||++|+++... +.. ..++..+...++.|++.++.++|+ ..||+||||||+||+++
T Consensus 82 ~~p~~~~~~~--~~lVmE~~~g~~~~~~~l~~----~~~~~~~~~~i~~~l~~~l~~lH~--~~givHrDlkP~NIll~- 152 (190)
T cd05145 82 PVPEPILLKK--NVLVMEFIGDDGSPAPRLKD----VPLEEEEAEELYEQVVEQMRRLYQ--EAGLVHGDLSEYNILYH- 152 (190)
T ss_pred CCceEEEecC--CEEEEEEecCCCchhhhhhh----ccCCHHHHHHHHHHHHHHHHHHHH--hCCEecCCCChhhEEEE-
Confidence 5544443332 4799999998865433 322 256778889999999999999993 27999999999999999
Q ss_pred CCCeEEcccccccccc
Q 011005 344 KLEAFVADFGTARLLH 359 (496)
Q Consensus 344 ~~~~kl~Dfg~~~~~~ 359 (496)
++.++|+|||+++...
T Consensus 153 ~~~~~liDFG~a~~~~ 168 (190)
T cd05145 153 DGKPYIIDVSQAVELD 168 (190)
T ss_pred CCCEEEEEcccceecC
Confidence 7899999999998764
No 417
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.85 E-value=4.5e-21 Score=177.16 Aligned_cols=233 Identities=21% Similarity=0.258 Sum_probs=147.0
Q ss_pred CCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccch--hHHHHHHHHHHHHHHHhhc----------ccccccccceee-
Q 011005 207 FDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVL----------HRNIVKLYGYCL- 272 (496)
Q Consensus 207 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~----------h~niv~~~~~~~- 272 (496)
+...+.||.|+++.||.+.+. +++.+|+|.+.... .....+.+.+|.-....+. |-.++-.++...
T Consensus 14 l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i 93 (288)
T PF14531_consen 14 LVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRI 93 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEE
T ss_pred EEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEE
Confidence 344667999999999999775 58999999886543 2334566666665554422 223333333221
Q ss_pred --------cC---Ce-----EEEEEEecCCCChhhhhhC---C-CCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEe
Q 011005 273 --------HK---KC-----MFLIYEYMERGSLFCNLHN---N-EDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHR 332 (496)
Q Consensus 273 --------~~---~~-----~~lV~e~~~~g~L~~~l~~---~-~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~ 332 (496)
.. .. .+++|+.+. ++|.+.+.. . .....+....++.+..|+++.+++|| ..|++|+
T Consensus 94 ~~~~~~~~~~~~~~~~~v~n~~~l~P~~~-~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh---~~GlVHg 169 (288)
T PF14531_consen 94 PGKPPFFERGPGQSIYWVLNRFLLMPRAQ-GDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLH---SYGLVHG 169 (288)
T ss_dssp TTS-SEEEECETTEEEEEESEEEEEE--S-EEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHH---HTTEEES
T ss_pred cCCCcceecCCCCccceeehhhhccchhh-hcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHh---hcceEec
Confidence 11 11 356788774 588776542 1 11223455666788899999999999 7899999
Q ss_pred CCCCCceEecCCCCeEEccccccccccCCCCCcccccccccccccccccc--------CCcCcccchhhHHHHHHHHHhC
Q 011005 333 DISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYT--------MVMTEKCDVYSFGVVTLEVLMG 404 (496)
Q Consensus 333 dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~DvwslG~il~el~~g 404 (496)
||+|+|++++.+|.++|+||+........ ......+..|.+||.... ..++.+.|.|++|+++|.|++|
T Consensus 170 di~~~nfll~~~G~v~Lg~F~~~~r~g~~---~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~ 246 (288)
T PF14531_consen 170 DIKPENFLLDQDGGVFLGDFSSLVRAGTR---YRCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCG 246 (288)
T ss_dssp T-SGGGEEE-TTS-EEE--GGGEEETTEE---EEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHS
T ss_pred ccceeeEEEcCCCCEEEcChHHHeecCce---eeccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHc
Confidence 99999999999999999999988654321 111334578999997644 2578899999999999999999
Q ss_pred CCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHHHHHHHHHHHHHhcccCCCCCC
Q 011005 405 KHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSR 462 (496)
Q Consensus 405 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R 462 (496)
..||+.......... ..-. +...+..+..||..+|+++|++|
T Consensus 247 ~lPf~~~~~~~~~~~------~f~~----------C~~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 247 RLPFGLSSPEADPEW------DFSR----------CRDMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp S-STCCCGGGSTSGG------GGTT----------SS---HHHHHHHHHHT-SSGGGS
T ss_pred cCCCCCCCccccccc------cchh----------cCCcCHHHHHHHHHHccCCcccC
Confidence 999985433211110 1111 11233457899999999999988
No 418
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.84 E-value=2.6e-20 Score=163.29 Aligned_cols=184 Identities=13% Similarity=0.094 Sum_probs=138.1
Q ss_pred CCcceeeecCCeeEEEEEeCCCcEEEEEEcccchh---HHHHHHHHHHHHHHHhhc-ccccccccceeecCCeEEEEEEe
Q 011005 208 DIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEE---LAFIKSFKNEAQVLSQVL-HRNIVKLYGYCLHKKCMFLIYEY 283 (496)
Q Consensus 208 ~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~---~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lV~e~ 283 (496)
.+...|+.|+||+||.+.. .+.+++.+.+..... ......+.+|+++++++. |+++++++++ +..+++|||
T Consensus 5 ~~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmey 79 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSY 79 (218)
T ss_pred ccceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEee
Confidence 3567799999999998877 677888777765432 112235789999999995 5889999886 346899999
Q ss_pred cCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCC-CCCceEecCCCCeEEccccccccccCCC
Q 011005 284 MERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDI-SSNNILLNSKLEAFVADFGTARLLHADS 362 (496)
Q Consensus 284 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dl-kp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 362 (496)
+.|.+|...... . ...++.|++.+|.++| ..||+|||| ||+||+++.++.++|+|||++.......
T Consensus 80 I~G~~L~~~~~~---------~-~~~~~~qi~~~L~~lH---~~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~ 146 (218)
T PRK12274 80 LAGAAMYQRPPR---------G-DLAYFRAARRLLQQLH---RCGVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRA 146 (218)
T ss_pred ecCccHHhhhhh---------h-hHHHHHHHHHHHHHHH---HCcCccCCCCCcceEEEcCCCCEEEEECCCceecCCcc
Confidence 999988644321 1 1347789999999999 789999999 7999999999999999999998654433
Q ss_pred CC-------------ccccccccccccccccccC-CcC-cccchhhHHHHHHHHHhCCCCCc
Q 011005 363 SN-------------RTLLAGTYGYIAPELAYTM-VMT-EKCDVYSFGVVTLEVLMGKHPRD 409 (496)
Q Consensus 363 ~~-------------~~~~~gt~~y~aPE~~~~~-~~~-~~~DvwslG~il~el~~g~~p~~ 409 (496)
.. ......++.|++|+...-. ..+ .+.+.++-|.-+|.++|+..|..
T Consensus 147 ~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~ 208 (218)
T PRK12274 147 RWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHW 208 (218)
T ss_pred hHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCcc
Confidence 21 0012256677777754322 223 46788999999999999999854
No 419
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.84 E-value=5.7e-22 Score=194.35 Aligned_cols=234 Identities=26% Similarity=0.338 Sum_probs=182.5
Q ss_pred eeecCCeeEEEEE----eCCCcEEEEEEcccchhH-HHHHHHHHHHHHHHhhc-ccccccccceeecCCeEEEEEEecCC
Q 011005 213 IGTGGYGSVYKAQ----LPNGKVFALKKLHTSEEL-AFIKSFKNEAQVLSQVL-HRNIVKLYGYCLHKKCMFLIYEYMER 286 (496)
Q Consensus 213 lg~G~~g~Vy~~~----~~~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lV~e~~~~ 286 (496)
+|+|+||.|+.+. ...|..+|.|..++.... ........|..++..++ ||.+|++...++.+...+++.++..|
T Consensus 2 lg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~rg 81 (612)
T KOG0603|consen 2 LGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLRG 81 (612)
T ss_pred CCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhccc
Confidence 6899999999873 335778888888764311 11114466888888887 99999999999999999999999999
Q ss_pred CChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCCCcc
Q 011005 287 GSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRT 366 (496)
Q Consensus 287 g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 366 (496)
|.+...+.... .+...........++-+++++| +.+++|||+|++||+++.+|++++.|||+++..-.....
T Consensus 82 g~lft~l~~~~---~f~~~~~~~~~aelaLald~lh---~l~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~~-- 153 (612)
T KOG0603|consen 82 GDLFTRLSKEV---MFDELDVAFYLAELALALDHLH---KLGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKIA-- 153 (612)
T ss_pred chhhhccccCC---chHHHHHHHHHHHHHHHHhhcc---hhHHHHhcccccceeecccCccccCCchhhhHhHhhhhc--
Confidence 99998887665 5667777778889999999999 889999999999999999999999999999876544322
Q ss_pred ccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHHHHHHH
Q 011005 367 LLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVIRDILL 446 (496)
Q Consensus 367 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (496)
+||.-|||||++. .....+|.||||++++||+||..||.. .....+....+..+. .....
T Consensus 154 --cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~-----------~~~~~Il~~~~~~p~-----~l~~~ 213 (612)
T KOG0603|consen 154 --CGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG-----------DTMKRILKAELEMPR-----ELSAE 213 (612)
T ss_pred --ccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch-----------HHHHHHhhhccCCch-----hhhHH
Confidence 8999999999999 557889999999999999999999973 222333332333222 12223
Q ss_pred HHHHHHhcccCCCCCCCCH-----HHHHHHHHH
Q 011005 447 ISTVSFACLQSNPKSRPTM-----QSVSQEFLI 474 (496)
Q Consensus 447 l~~li~~cl~~dP~~Rps~-----~evl~~~~~ 474 (496)
...++..++..+|..|.-. .|+.+|.++
T Consensus 214 a~~~~~~l~~r~p~nrLg~~~~~~~eik~h~f~ 246 (612)
T KOG0603|consen 214 ARSLFRQLFKRNPENRLGAGPDGVDEIKQHEFF 246 (612)
T ss_pred HHHHHHHHHhhCHHHHhccCcchhHHHhccchh
Confidence 5677788999999998754 455555444
No 420
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.83 E-value=1.5e-20 Score=173.84 Aligned_cols=246 Identities=25% Similarity=0.368 Sum_probs=164.2
Q ss_pred hCCCCcceeeecCCeeEEEEEeCC-C-----------------------------------cEEEEEEcccc----hhHH
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLPN-G-----------------------------------KVFALKKLHTS----EELA 244 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~~-~-----------------------------------~~vavK~~~~~----~~~~ 244 (496)
++|++.+.||+|+...||.|+.++ | -+.|||.+..- .+..
T Consensus 157 ddyeiG~~igkGC~AaVY~A~~~~dg~~le~~~~t~~~pgf~p~ts~p~e~~q~~~p~~~aFPLAiKmMfN~~~~s~~~~ 236 (598)
T KOG4158|consen 157 DDYEIGEFIGKGCNAAVYSARLANDGSDLESSGNTHYGPGFNPVTSIPAEIPQVSKPAQKAFPLAIKMMFNFEHDSGDAH 236 (598)
T ss_pred hhhcccchhhccchhhhhhhhcCCCcccccccCCCCcCCCcCCCcCCcccCCcccCccccccchHHHHhcccccCCchHH
Confidence 568899999999999999997543 0 02567766431 2223
Q ss_pred HHHHHHHHH--------------HHHHh--------hcccccccccceeec---------------------------CC
Q 011005 245 FIKSFKNEA--------------QVLSQ--------VLHRNIVKLYGYCLH---------------------------KK 275 (496)
Q Consensus 245 ~~~~~~~e~--------------~~l~~--------l~h~niv~~~~~~~~---------------------------~~ 275 (496)
..+.+.+|. ...+. -+|||||++.++|.+ +.
T Consensus 237 iL~sM~~ElvPa~~~a~~~e~~~~t~R~l~nqtvhLa~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~ 316 (598)
T KOG4158|consen 237 ILKSMGNELVPAPNAAKLLEGQMGTFRPLPNQTVHLAKHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPK 316 (598)
T ss_pred HHHHhhhhccCcchhhhhcccccceeeeCCCCCcccCCCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCc
Confidence 333333332 11111 249999999987754 23
Q ss_pred eEEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEec--CCC--CeEEcc
Q 011005 276 CMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLN--SKL--EAFVAD 351 (496)
Q Consensus 276 ~~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~--~~~--~~kl~D 351 (496)
.+|+||...+. +|..++..+ ..+.....-|+.|+++|+.||| .+||.|||+|++|||+. +++ ...++|
T Consensus 317 tlylvMkrY~~-tLr~yl~~~----~~s~r~~~~~laQlLEav~hL~---~hgvAhRDlKSDNiL~ElddD~~P~LVvaD 388 (598)
T KOG4158|consen 317 TLYLVMKRYRQ-TLREYLWTR----HRSYRTGRVILAQLLEAVTHLH---KHGVAHRDLKSDNILLELDDDEIPQLVVAD 388 (598)
T ss_pred eEEEehhcchh-hHHHHHhcC----CCchHHHHHHHHHHHHHHHHHH---HccchhhcccccceEEEecCCCCcEEEEcc
Confidence 57899998864 899888865 3455666778999999999999 88999999999999994 333 467999
Q ss_pred ccccccccCCC------CCccccccccccccccccccCC------cCcccchhhHHHHHHHHHhCCCCCccccccCCCCC
Q 011005 352 FGTARLLHADS------SNRTLLAGTYGYIAPELAYTMV------MTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSD 419 (496)
Q Consensus 352 fg~~~~~~~~~------~~~~~~~gt~~y~aPE~~~~~~------~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~ 419 (496)
||++---.... .......|.-.-||||+..... .-.++|.|+.|.+.||+++...||-.-..+..+.
T Consensus 389 FGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~- 467 (598)
T KOG4158|consen 389 FGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDT- 467 (598)
T ss_pred cceeeeccccccccccccccccCCCcceecchhhhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchheech-
Confidence 99984221110 1122345777899999876432 1248999999999999999999986422111110
Q ss_pred CcchhHhhhcCCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHH
Q 011005 420 PKIMLIDVLDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSV 468 (496)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ev 468 (496)
...-...++.-. ...+..+.+++...|++||.+|++..-.
T Consensus 468 -----r~Yqe~qLPalp----~~vpp~~rqlV~~lL~r~pskRvsp~iA 507 (598)
T KOG4158|consen 468 -----RTYQESQLPALP----SRVPPVARQLVFDLLKRDPSKRVSPNIA 507 (598)
T ss_pred -----hhhhhhhCCCCc----ccCChHHHHHHHHHhcCCccccCCccHH
Confidence 111111222211 1223346789999999999999986543
No 421
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.83 E-value=2.1e-20 Score=183.53 Aligned_cols=214 Identities=27% Similarity=0.466 Sum_probs=160.8
Q ss_pred HhhcccccccccceeecCCeEEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCC
Q 011005 257 SQVLHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISS 336 (496)
Q Consensus 257 ~~l~h~niv~~~~~~~~~~~~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp 336 (496)
+.+.|.|+.+++|.+.++...+.|.+||..|+|.+.+... ...+++.-...+.++|+.||+|+|+ +..-.|+.+++
T Consensus 2 ~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~--~~~~d~~F~~s~~rdi~~Gl~ylh~--s~i~~hg~l~s 77 (484)
T KOG1023|consen 2 RQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNE--DIKLDYFFILSFIRDISKGLAYLHN--SPIGYHGALKS 77 (484)
T ss_pred cccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhcc--ccCccHHHHHHHHHHHHHHHHHHhc--Ccceeeeeecc
Confidence 5678999999999999999999999999999999999873 3478888889999999999999995 33449999999
Q ss_pred CceEecCCCCeEEccccccccccCC--CCCccccccccccccccccccCC-------cCcccchhhHHHHHHHHHhCCCC
Q 011005 337 NNILLNSKLEAFVADFGTARLLHAD--SSNRTLLAGTYGYIAPELAYTMV-------MTEKCDVYSFGVVTLEVLMGKHP 407 (496)
Q Consensus 337 ~Nil~~~~~~~kl~Dfg~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~-------~~~~~DvwslG~il~el~~g~~p 407 (496)
.|++++....+|++|||+....... ........-..-|.|||.+.+.. .+.+.||||+|++++|+++.+.|
T Consensus 78 ~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~ 157 (484)
T KOG1023|consen 78 SNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGP 157 (484)
T ss_pred ccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCc
Confidence 9999999999999999999776421 11111122345799999987642 46689999999999999999999
Q ss_pred CccccccCCCCCCcchhHhhhc-CC--CCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccC
Q 011005 408 RDILSSLSSSSDPKIMLIDVLD-QR--LPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKT 478 (496)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~ 478 (496)
|+....... +.+....+.. .. ..+...... .....+..++.+||..+|++||+++++-..+....+.
T Consensus 158 ~~~~~~~~~---~~eii~~~~~~~~~~~rP~i~~~~-e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~~~ 227 (484)
T KOG1023|consen 158 FDLRNLVED---PDEIILRVKKGGSNPFRPSIELLN-ELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTINKG 227 (484)
T ss_pred cccccccCC---hHHHHHHHHhcCCCCcCcchhhhh-hcchHHHHHHHHhcccChhhCccHHHHHhhhhhhccc
Confidence 985432211 1222222222 11 111111111 2223578899999999999999999998877665554
No 422
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.81 E-value=6.1e-20 Score=192.54 Aligned_cols=195 Identities=26% Similarity=0.301 Sum_probs=159.5
Q ss_pred HHhCCCCcceeeecCCeeEEEEEeCCCcEEEEEEcccchhHHHHHHHHHHHHHHHhhc---ccccccccceeecCCeEEE
Q 011005 203 ATEDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVL---HRNIVKLYGYCLHKKCMFL 279 (496)
Q Consensus 203 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~~~~~~~~~~~~~l 279 (496)
-.+.|.|.+.+|+|+||+||+|...+|+.||+|+-+....-+ |.-=.+++.+|+ -+.|..+..++.-.+.-++
T Consensus 696 ~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~WE----fYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S~l 771 (974)
T KOG1166|consen 696 GGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPWE----FYICLQVMERLKPQMLPSIMHISSAHVFQNASVL 771 (974)
T ss_pred cceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCcee----eeehHHHHHhhchhhhcchHHHHHHHccCCccee
Confidence 456788899999999999999988889999999987654321 111233344444 3556777777777778899
Q ss_pred EEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecC-------CCCeEEccc
Q 011005 280 IYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNS-------KLEAFVADF 352 (496)
Q Consensus 280 V~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~-------~~~~kl~Df 352 (496)
|+||.+.|+|.+++...+ .+++.-++.+..|+++.+++|| ..+||||||||+|+++.. ...++|+||
T Consensus 772 v~ey~~~Gtlld~~N~~~---~m~e~lv~~~~~qml~ive~lH---~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDf 845 (974)
T KOG1166|consen 772 VSEYSPYGTLLDLINTNK---VMDEYLVMFFSCQMLRIVEHLH---AMGIIHGDIKPDNFLLRREICADSDSKGLYLIDF 845 (974)
T ss_pred eeeccccccHHHhhccCC---CCCchhhhHHHHHHHHHHHHHH---hcceecccCCcceeEeecccCCCCcccceEEEec
Confidence 999999999999998443 7889999999999999999999 889999999999999953 345899999
Q ss_pred cccccccCC--CCCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCC
Q 011005 353 GTARLLHAD--SSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 407 (496)
Q Consensus 353 g~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p 407 (496)
|.+..+.-- .......++|-.+-.+|...|..+++.+|-|.++.+++-|+.|+.-
T Consensus 846 G~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y~ 902 (974)
T KOG1166|consen 846 GRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKYM 902 (974)
T ss_pred ccceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHHH
Confidence 999876533 2334556788999999999999999999999999999999999765
No 423
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.79 E-value=5.5e-20 Score=177.11 Aligned_cols=178 Identities=25% Similarity=0.369 Sum_probs=137.1
Q ss_pred eEEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEcccccc
Q 011005 276 CMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTA 355 (496)
Q Consensus 276 ~~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~ 355 (496)
+.++.|++|+..+|.+++.........++.....++.|++.|+.| ++.+|+|+||.||+...+..+||+|||+.
T Consensus 330 ~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y------k~~ihrdlkp~nif~~~d~q~kIgDFgl~ 403 (516)
T KOG1033|consen 330 YLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY------KGLIHRDLKPSNIFFSDDDQLKIGDFGLV 403 (516)
T ss_pred chhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh------ccchhhhccccccccccchhhhhhhhhhe
Confidence 578999999999999999877767778899999999999999999 38999999999999999999999999999
Q ss_pred ccccCCC------CCccccccccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccCCCCCCcchhHhhh
Q 011005 356 RLLHADS------SNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSSDPKIMLIDVL 428 (496)
Q Consensus 356 ~~~~~~~------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~ 428 (496)
....... ...+..+||..||+||.+.+..|+.++||||||++|+|++. =..++. ......++-
T Consensus 404 ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~e----------r~~t~~d~r 473 (516)
T KOG1033|consen 404 TSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFE----------RIATLTDIR 473 (516)
T ss_pred eecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHH----------HHHhhhhhh
Confidence 8776544 12345679999999999999999999999999999999996 122221 111222233
Q ss_pred cCCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHH
Q 011005 429 DQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFL 473 (496)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~ 473 (496)
+..+++..- .+-..=..|+.+++...|.+||++.+..-+.|
T Consensus 474 ~g~ip~~~~----~d~p~e~~ll~~lls~~p~~RP~~~~~~~~~~ 514 (516)
T KOG1033|consen 474 DGIIPPEFL----QDYPEEYTLLQQLLSPSPEERPSAIEVALHEF 514 (516)
T ss_pred cCCCChHHh----hcCcHHHHHHHHhcCCCcccCchHHHHhhhhh
Confidence 333332111 11112347778999999999997766655544
No 424
>smart00090 RIO RIO-like kinase.
Probab=99.79 E-value=1.3e-18 Score=159.90 Aligned_cols=142 Identities=20% Similarity=0.224 Sum_probs=110.3
Q ss_pred CCCCcceeeecCCeeEEEEE--eCCCcEEEEEEcccchhH-----------------------HHHHHHHHHHHHHHhhc
Q 011005 206 DFDIRYCIGTGGYGSVYKAQ--LPNGKVFALKKLHTSEEL-----------------------AFIKSFKNEAQVLSQVL 260 (496)
Q Consensus 206 ~~~~~~~lg~G~~g~Vy~~~--~~~~~~vavK~~~~~~~~-----------------------~~~~~~~~e~~~l~~l~ 260 (496)
-|.+.+.||+|++|.||+|. ..+|+.||+|.++..... .....+.+|+..++++.
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~ 108 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY 108 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 47788999999999999997 568999999998753210 01133578999999997
Q ss_pred ccc--cccccceeecCCeEEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCC-eEEeCCCCC
Q 011005 261 HRN--IVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPS-IIHRDISSN 337 (496)
Q Consensus 261 h~n--iv~~~~~~~~~~~~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~-i~H~dlkp~ 337 (496)
+.+ +.+++++ . ..++||||++|+++........ .+...+...++.|++.++.+|| ..+ ++||||||+
T Consensus 109 ~~~i~~p~~~~~---~-~~~lV~E~~~g~~L~~~~~~~~---~~~~~~~~~i~~qi~~~l~~LH---~~g~iiH~Dikp~ 178 (237)
T smart00090 109 EAGVPVPKPIAW---R-RNVLVMEFIGGDGLPAPRLKDV---EPEEEEEFELYDDILEEMRKLY---KEGELVHGDLSEY 178 (237)
T ss_pred hcCCCCCeeeEe---c-CceEEEEEecCCcccccccccC---CcchHHHHHHHHHHHHHHHHHH---hcCCEEeCCCChh
Confidence 633 3344432 2 3479999999988876543222 3455667889999999999999 778 999999999
Q ss_pred ceEecCCCCeEEccccccccc
Q 011005 338 NILLNSKLEAFVADFGTARLL 358 (496)
Q Consensus 338 Nil~~~~~~~kl~Dfg~~~~~ 358 (496)
||+++ ++.++++|||.+...
T Consensus 179 NIli~-~~~i~LiDFg~a~~~ 198 (237)
T smart00090 179 NILVH-DGKVVIIDVSQSVEL 198 (237)
T ss_pred hEEEE-CCCEEEEEChhhhcc
Confidence 99999 889999999998754
No 425
>PRK10345 hypothetical protein; Provisional
Probab=99.78 E-value=1.6e-18 Score=155.26 Aligned_cols=135 Identities=18% Similarity=0.211 Sum_probs=104.1
Q ss_pred CcceeeecCCeeEEEEEeCCCcEEEEEEcccchhHHHHHHHHHHHHHHHhh-----cccccccccceeecCC---e-EEE
Q 011005 209 IRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQV-----LHRNIVKLYGYCLHKK---C-MFL 279 (496)
Q Consensus 209 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-----~h~niv~~~~~~~~~~---~-~~l 279 (496)
-.+.||+|+||.||. +++....+||++...... ..+.+.+|+.+++.+ .||||++++|++.++. . +.+
T Consensus 6 ~~~~LG~G~~~~Vy~--hp~~~~k~IKv~~~~~~~-~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~ 82 (210)
T PRK10345 6 EQSPLGTGRHRKCYA--HPEDAQRCIKIVYHRGDG-GDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDV 82 (210)
T ss_pred CcceecCCCceEEEE--CCCCcCeEEEEEeccccc-hHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEE
Confidence 356799999999996 544344479988654322 236789999999999 5799999999998864 3 347
Q ss_pred EEEe--cCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHH-HHHHhCCCCCeEEeCCCCCceEecC----CCCeEEcc-
Q 011005 280 IYEY--MERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHAL-AYLHHDCSPSIIHRDISSNNILLNS----KLEAFVAD- 351 (496)
Q Consensus 280 V~e~--~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l-~~lh~~~~~~i~H~dlkp~Nil~~~----~~~~kl~D- 351 (496)
|+|| +.+|+|.+++... .+++. ..++.+++.++ +||| +.+|+||||||+||+++. ++.++|+|
T Consensus 83 I~e~~G~~~~tL~~~l~~~----~~~e~--~~~~~~~L~~l~~yLh---~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg 153 (210)
T PRK10345 83 IADFDGKPSITLTEFAEQC----RYEED--VAQLRQLLKKLKRYLL---DNRIVTMELKPQNILCQRISESEVIPVVCDN 153 (210)
T ss_pred EecCCCCcchhHHHHHHcc----cccHh--HHHHHHHHHHHHHHHH---HCCEeecCCCHHHEEEeccCCCCCcEEEEEC
Confidence 8999 5579999999653 34444 35677888777 9999 789999999999999974 34799999
Q ss_pred cccc
Q 011005 352 FGTA 355 (496)
Q Consensus 352 fg~~ 355 (496)
||..
T Consensus 154 ~G~~ 157 (210)
T PRK10345 154 IGES 157 (210)
T ss_pred CCCc
Confidence 5543
No 426
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.76 E-value=7.3e-18 Score=153.53 Aligned_cols=135 Identities=21% Similarity=0.336 Sum_probs=112.9
Q ss_pred ceeeecCCeeEEEEEeCCCcEEEEEEcccch-------hHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEe
Q 011005 211 YCIGTGGYGSVYKAQLPNGKVFALKKLHTSE-------ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEY 283 (496)
Q Consensus 211 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-------~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~ 283 (496)
+.||+|++|.||+|.+ .|..+++|+..... .......+.+|+.++..+.|+++.....++......++||||
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~ 80 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEY 80 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEE
Confidence 4689999999999987 67788999765421 011224578899999999999998888777777788999999
Q ss_pred cCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEcccccccc
Q 011005 284 MERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARL 357 (496)
Q Consensus 284 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 357 (496)
++|++|.+.+.... . .+..++.+++.+|.++| ..+++|||++|+||+++ ++.++++|||.+..
T Consensus 81 ~~G~~L~~~~~~~~------~-~~~~i~~~i~~~l~~lH---~~~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 81 IEGEPLKDLINSNG------M-EELELSREIGRLVGKLH---SAGIIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred eCCcCHHHHHHhcc------H-HHHHHHHHHHHHHHHHH---hCCcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 99999999886432 1 77889999999999999 78999999999999999 78899999998864
No 427
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.76 E-value=9.1e-18 Score=151.06 Aligned_cols=144 Identities=19% Similarity=0.223 Sum_probs=110.4
Q ss_pred HHHHHhCCCCcceeeecCCeeEEEEEeCCCcEEEEEEcccchhH---------------------HHHHHHHHHHHHHHh
Q 011005 200 LIEATEDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEEL---------------------AFIKSFKNEAQVLSQ 258 (496)
Q Consensus 200 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~---------------------~~~~~~~~e~~~l~~ 258 (496)
+......|.+.+.||+|+||.||+|..++|+.||||++...... .......+|+.++..
T Consensus 10 ~~~~~~~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~ 89 (198)
T cd05144 10 LVKRGVVESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKA 89 (198)
T ss_pred HHHcCchhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHH
Confidence 33333347788999999999999998888999999987543200 011235778999999
Q ss_pred hcccc--cccccceeecCCeEEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCC
Q 011005 259 VLHRN--IVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISS 336 (496)
Q Consensus 259 l~h~n--iv~~~~~~~~~~~~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp 336 (496)
+.|++ ++..++. ...++||||++|++|...... .....++.+++.++.++| ..+++||||+|
T Consensus 90 l~~~~i~v~~~~~~----~~~~lv~e~~~g~~L~~~~~~---------~~~~~~~~~i~~~l~~lh---~~gi~H~Dl~p 153 (198)
T cd05144 90 LYEEGFPVPKPIDW----NRHAVVMEYIDGVELYRVRVL---------EDPEEVLDEILEEIVKAY---KHGIIHGDLSE 153 (198)
T ss_pred HHHcCCCCCceeec----CCceEEEEEeCCcchhhcccc---------ccHHHHHHHHHHHHHHHH---HCCCCcCCCCc
Confidence 98874 3444432 345899999999988755321 234568899999999999 78999999999
Q ss_pred CceEecCCCCeEEcccccccccc
Q 011005 337 NNILLNSKLEAFVADFGTARLLH 359 (496)
Q Consensus 337 ~Nil~~~~~~~kl~Dfg~~~~~~ 359 (496)
+||++++++.++|+|||.+....
T Consensus 154 ~Nill~~~~~~~liDfg~~~~~~ 176 (198)
T cd05144 154 FNILVDDDEKIYIIDWPQMVSTD 176 (198)
T ss_pred ccEEEcCCCcEEEEECCccccCC
Confidence 99999999999999999996554
No 428
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.74 E-value=1.2e-18 Score=179.61 Aligned_cols=219 Identities=26% Similarity=0.329 Sum_probs=148.8
Q ss_pred HhCCCCcceeeecCCeeEEEEEeCC-CcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEE
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLPN-GKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYE 282 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e 282 (496)
..+|..++.+..|+||.||..+++. .+.+|. ++.+... -+.+ ++.....|.+|
T Consensus 82 e~df~~IklisngAygavylvrh~~trqrfa~-kiNkq~l-----ilRn---ilt~a~npfvv----------------- 135 (1205)
T KOG0606|consen 82 ESDFNTIKLISNGAYGAVYLVRHKETRQRFAM-KINKQNL-----ILRN---ILTFAGNPFVV----------------- 135 (1205)
T ss_pred ccccceeEeeccCCCCceeeeeccccccchhh-cccccch-----hhhc---cccccCCccee-----------------
Confidence 3679999999999999999998864 556777 4433221 0111 22222333333
Q ss_pred ecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCC
Q 011005 283 YMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADS 362 (496)
Q Consensus 283 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 362 (496)
|+=...+...+ .++.. ++.+++|+| ..||+|||+||+|.+|+.-|++|++|||+++......
T Consensus 136 ----gDc~tllk~~g---~lPvd--------mvla~Eylh---~ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~ 197 (1205)
T KOG0606|consen 136 ----GDCATLLKNIG---PLPVD--------MVLAVEYLH---SYGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSL 197 (1205)
T ss_pred ----chhhhhcccCC---CCcch--------hhHHhHhhc---cCCeecCCCCCCcceeeecccccccchhhhhhhhhhc
Confidence 23233333322 33332 388999999 8899999999999999999999999999997542110
Q ss_pred ---------------CCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhh
Q 011005 363 ---------------SNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDV 427 (496)
Q Consensus 363 ---------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~ 427 (496)
......+|||.|.|||++....|...+|.|++|+|+||++-|+.||.. ..+++....+
T Consensus 198 atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffG-------dtpeelfg~v 270 (1205)
T KOG0606|consen 198 ATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFG-------DTPEELFGQV 270 (1205)
T ss_pred cchhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccC-------CCHHHHHhhh
Confidence 112235899999999999999999999999999999999999999862 2233333333
Q ss_pred hcCCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCC---CHHHHHHHHHHh
Q 011005 428 LDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRP---TMQSVSQEFLIT 475 (496)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp---s~~evl~~~~~~ 475 (496)
+...+..+.. ......+..+++.+.|+.+|..|. .+-++-+|.+++
T Consensus 271 isd~i~wpE~--dea~p~Ea~dli~~LL~qnp~~Rlgt~ga~evk~h~ff~ 319 (1205)
T KOG0606|consen 271 ISDDIEWPEE--DEALPPEAQDLIEQLLRQNPLCRLGTGGALEVKQHGFFQ 319 (1205)
T ss_pred hhhhcccccc--CcCCCHHHHHHHHHHHHhChHhhcccchhhhhhhcccee
Confidence 3333332222 112223467888999999999997 355555555443
No 429
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.74 E-value=1.4e-17 Score=150.21 Aligned_cols=131 Identities=20% Similarity=0.348 Sum_probs=106.5
Q ss_pred eeeecCCeeEEEEEeCCCcEEEEEEcccch-------hHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEec
Q 011005 212 CIGTGGYGSVYKAQLPNGKVFALKKLHTSE-------ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEYM 284 (496)
Q Consensus 212 ~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-------~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~~ 284 (496)
.||+|+||.||+|.+ ++..+++|...... .......+.+|+++++.+.|+++.....++......++||||+
T Consensus 1 ~ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~ 79 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYI 79 (199)
T ss_pred CCCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEE
Confidence 389999999999986 56789999864321 1112356778999999999888766666666666678999999
Q ss_pred CCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEcccccccc
Q 011005 285 ERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARL 357 (496)
Q Consensus 285 ~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 357 (496)
+|++|.+.+.... . .++.+++.+|.++| ..+++|||++|+||+++ ++.++++|||++..
T Consensus 80 ~g~~l~~~~~~~~---~-------~~~~~i~~~l~~lH---~~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~ 138 (199)
T TIGR03724 80 EGKPLKDVIEEGN---D-------ELLREIGRLVGKLH---KAGIVHGDLTTSNIIVR-DDKLYLIDFGLGKY 138 (199)
T ss_pred CCccHHHHHhhcH---H-------HHHHHHHHHHHHHH---HCCeecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence 9999998775421 0 68999999999999 78999999999999999 78999999999865
No 430
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.74 E-value=3.2e-17 Score=169.67 Aligned_cols=139 Identities=19% Similarity=0.274 Sum_probs=111.8
Q ss_pred HhCCCCcceeeecCCeeEEEEEeCCCcEEEEEE-cccc------hhHHHHHHHHHHHHHHHhhcccccccccceeecCCe
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLPNGKVFALKK-LHTS------EELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKC 276 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~-~~~~------~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 276 (496)
...|...+.||+|+||+||+|.+.+.. +++|+ .... ........+.+|+++++.++|++++....++.....
T Consensus 332 ~~~~~~~~~iG~G~~g~Vy~~~~~~~~-~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~ 410 (535)
T PRK09605 332 KRRKIPDHLIGKGAEADIKKGEYLGRD-AVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEE 410 (535)
T ss_pred ccccCccceeccCCcEEEEEEeecCcc-ceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCC
Confidence 445667889999999999999875544 34433 2221 111223567899999999999999988877777777
Q ss_pred EEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccc
Q 011005 277 MFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTAR 356 (496)
Q Consensus 277 ~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~ 356 (496)
.++||||++|++|.+.+. ....++.+++.+|.+|| ..+++|||+||+||++ .++.++|+|||+++
T Consensus 411 ~~lv~E~~~g~~L~~~l~-----------~~~~~~~~i~~~L~~lH---~~giiHrDlkp~NILl-~~~~~~liDFGla~ 475 (535)
T PRK09605 411 KTIVMEYIGGKDLKDVLE-----------GNPELVRKVGEIVAKLH---KAGIVHGDLTTSNFIV-RDDRLYLIDFGLGK 475 (535)
T ss_pred CEEEEEecCCCcHHHHHH-----------HHHHHHHHHHHHHHHHH---hCCCccCCCChHHEEE-ECCcEEEEeCcccc
Confidence 889999999999988775 34578999999999999 7899999999999999 57789999999997
Q ss_pred cc
Q 011005 357 LL 358 (496)
Q Consensus 357 ~~ 358 (496)
..
T Consensus 476 ~~ 477 (535)
T PRK09605 476 YS 477 (535)
T ss_pred cC
Confidence 53
No 431
>PLN03150 hypothetical protein; Provisional
Probab=99.69 E-value=4.9e-17 Score=170.03 Aligned_cols=152 Identities=31% Similarity=0.512 Sum_probs=119.7
Q ss_pred CCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCCCCccccCcccccccccc
Q 011005 16 NLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGSIPGEITKLSRLDYLNLS 95 (496)
Q Consensus 16 ~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~l~~L~~l~l~ 95 (496)
.++.|+|++|.+.|.+|..++.+++|+.|+|++|+|+|.+|..+..+++|+.|+|++|++++.+|..+++|++|+.|+|+
T Consensus 419 ~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls 498 (623)
T PLN03150 419 FIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLN 498 (623)
T ss_pred EEEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECc
Confidence 37889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCCCCCCCC-ccccccccCCCCCCCCCCCCCCCCCCCCCCccchhhhhhHHHHHHHHHHHHHHHhHhh
Q 011005 96 SNKLSGPVPFSNNDLS-SMHTVVSLSPNNGLCGNILDLPSCDTTKPATLFVEIFLPLTIVLSVIVFACLLLAKRK 169 (496)
Q Consensus 96 ~n~l~~~~~~~~~~l~-~l~~~~~~~~n~~~c~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~~~~~~~~~r~ 169 (496)
+|+++|.+|..+..+. ++ .-+.+..|+..|+.+ ..+.|.........+.++++++++++++++.++++++||
T Consensus 499 ~N~l~g~iP~~l~~~~~~~-~~l~~~~N~~lc~~p-~l~~C~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~r 571 (623)
T PLN03150 499 GNSLSGRVPAALGGRLLHR-ASFNFTDNAGLCGIP-GLRACGPHLSVGAKIGIAFGVSVAFLFLVICAMCWWKRR 571 (623)
T ss_pred CCcccccCChHHhhccccC-ceEEecCCccccCCC-CCCCCcccCCCceEEEEEhHHHHHHHHHHHHHhhheeeh
Confidence 9999999998887643 33 335688899999853 456776544433334444433333333333333444443
No 432
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.67 E-value=5.9e-16 Score=138.11 Aligned_cols=138 Identities=20% Similarity=0.234 Sum_probs=98.6
Q ss_pred cceeeecCCeeEEEEEeCCCcEEEEEEcccchhH--HHHH---------------------HHHHHHHHHHhhcccc--c
Q 011005 210 RYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEEL--AFIK---------------------SFKNEAQVLSQVLHRN--I 264 (496)
Q Consensus 210 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~~~~---------------------~~~~e~~~l~~l~h~n--i 264 (496)
.+.||+|+||+||+|...+++.||||.+...... .... ....|...+.++.+.+ +
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 4679999999999998888999999988653211 1001 1135566666665433 3
Q ss_pred ccccceeecCCeEEEEEEecCCCChhhh-hhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCC-CCeEEeCCCCCceEec
Q 011005 265 VKLYGYCLHKKCMFLIYEYMERGSLFCN-LHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCS-PSIIHRDISSNNILLN 342 (496)
Q Consensus 265 v~~~~~~~~~~~~~lV~e~~~~g~L~~~-l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~-~~i~H~dlkp~Nil~~ 342 (496)
.+.+++ ...++||||++++.+... +.... .. .++..++.+++.++.++| . .+++|+||||+||+++
T Consensus 82 ~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~----~~-~~~~~~~~~~~~~l~~lh---~~~~ivH~Dl~p~Nili~ 149 (187)
T cd05119 82 PKPIDL----NRHVLVMEFIGGDGIPAPRLKDVR----LL-EDPEELYDQILELMRKLY---REAGLVHGDLSEYNILVD 149 (187)
T ss_pred CceEec----CCCEEEEEEeCCCCccChhhhhhh----hc-ccHHHHHHHHHHHHHHHh---hccCcCcCCCChhhEEEE
Confidence 344433 235899999999654321 21111 11 567789999999999999 5 8999999999999999
Q ss_pred CCCCeEEccccccccccC
Q 011005 343 SKLEAFVADFGTARLLHA 360 (496)
Q Consensus 343 ~~~~~kl~Dfg~~~~~~~ 360 (496)
++.++++|||.+.....
T Consensus 150 -~~~~~liDfg~a~~~~~ 166 (187)
T cd05119 150 -DGKVYIIDVPQAVEIDH 166 (187)
T ss_pred -CCcEEEEECcccccccC
Confidence 88999999999976543
No 433
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.66 E-value=9.6e-16 Score=131.58 Aligned_cols=135 Identities=19% Similarity=0.174 Sum_probs=113.2
Q ss_pred CcceeeecCCeeEEEEEeCCCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcc--cccccccceeecCCeEEEEEEecCC
Q 011005 209 IRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLH--RNIVKLYGYCLHKKCMFLIYEYMER 286 (496)
Q Consensus 209 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h--~niv~~~~~~~~~~~~~lV~e~~~~ 286 (496)
+.+.||+|.++.||++...+ ..+++|....... ...+.+|+.+++.+.| .++++++++...++..+++|||+++
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~---~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g 77 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKD-EDYVLKINPSREK---GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEG 77 (155)
T ss_pred cceecccccccceEEEEecC-CeEEEEecCCCCc---hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCC
Confidence 35679999999999998855 7899999866543 3568899999999986 5889999988888889999999998
Q ss_pred CChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEcccccccc
Q 011005 287 GSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARL 357 (496)
Q Consensus 287 g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 357 (496)
+.+... +......++.+++.++.++|.....+++|+|++|+||++++.+.++++|||.+..
T Consensus 78 ~~~~~~----------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 78 ETLDEV----------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY 138 (155)
T ss_pred eecccC----------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence 776533 4566677899999999999954335799999999999999989999999998864
No 434
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.64 E-value=3.1e-17 Score=169.07 Aligned_cols=258 Identities=21% Similarity=0.292 Sum_probs=193.1
Q ss_pred hCCCCcceeeecCCeeEEEEEeC--CCcEEEEEEcccch-hHHHHHHHHHHHHHHHhhc-ccccccccceeecCCeEEEE
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLP--NGKVFALKKLHTSE-ELAFIKSFKNEAQVLSQVL-HRNIVKLYGYCLHKKCMFLI 280 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~--~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lV 280 (496)
..|.+.+.||+|+|+.|-..... ....+|+|.+.... ..........|..+-+.+. |+|++.+++........+++
T Consensus 20 ~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~ 99 (601)
T KOG0590|consen 20 SQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLLS 99 (601)
T ss_pred ccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCcccccc
Confidence 45777888999999999888653 34456666665542 2333445566888888887 99999999999999999999
Q ss_pred EEecCCCChhhhh-hCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCC-CeEEccccccccc
Q 011005 281 YEYMERGSLFCNL-HNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKL-EAFVADFGTARLL 358 (496)
Q Consensus 281 ~e~~~~g~L~~~l-~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~-~~kl~Dfg~~~~~ 358 (496)
+++..|+++.+-+ .... ...+...+..++.|+..++.|+|. ..++.|+|+||+|.+++..+ ..++.|||+|..+
T Consensus 100 ~~~s~g~~~f~~i~~~~~--~~~~~~~~~~~~~ql~s~l~~~H~--~~~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~ 175 (601)
T KOG0590|consen 100 LSYSDGGSLFSKISHPDS--TGTSSSSASRYLPQLNSGLSYLHP--ENGVTHRDIKPSNSLLDESGSALKIADFGLATAY 175 (601)
T ss_pred cCcccccccccccccCCc--cCCCCcchhhhhhhhccCccccCc--ccccccCCCCCccchhccCCCcccCCCchhhccc
Confidence 9999999999888 4322 134445566789999999999995 45899999999999999999 9999999999887
Q ss_pred cC-CCC--Ccccccc-ccccccccccccCC-cCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCC--
Q 011005 359 HA-DSS--NRTLLAG-TYGYIAPELAYTMV-MTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQR-- 431 (496)
Q Consensus 359 ~~-~~~--~~~~~~g-t~~y~aPE~~~~~~-~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~-- 431 (496)
.. .+. .....+| ++.|+|||...+.. ..+..|+||.|+++.-+++|..|++....... .........
T Consensus 176 ~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~------~~~~~~~~~~~ 249 (601)
T KOG0590|consen 176 RNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDG------RYSSWKSNKGR 249 (601)
T ss_pred cccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccc------cceeecccccc
Confidence 65 222 2334567 99999999998854 45789999999999999999999875433211 111111111
Q ss_pred -CCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhc
Q 011005 432 -LPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITR 476 (496)
Q Consensus 432 -~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~ 476 (496)
-..+.. .......++..+++..+|..|.+.+++-.+.|...
T Consensus 250 ~~~~~~~----~~~~~~~~~l~k~l~~~~~~r~s~~~~~~d~~~~~ 291 (601)
T KOG0590|consen 250 FTQLPWN----SISDQAHDLLHKILKENPSNRLSIEELKLDNWLSS 291 (601)
T ss_pred cccCccc----cCChhhhhcccccccCCchhccccccccccccccc
Confidence 011111 11123456777899999999999999999999988
No 435
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.63 E-value=3.9e-15 Score=137.16 Aligned_cols=137 Identities=20% Similarity=0.285 Sum_probs=105.4
Q ss_pred cceee-ecCCeeEEEEEeCCCcEEEEEEcccch------------hHHHHHHHHHHHHHHHhhccccc--ccccceeecC
Q 011005 210 RYCIG-TGGYGSVYKAQLPNGKVFALKKLHTSE------------ELAFIKSFKNEAQVLSQVLHRNI--VKLYGYCLHK 274 (496)
Q Consensus 210 ~~~lg-~G~~g~Vy~~~~~~~~~vavK~~~~~~------------~~~~~~~~~~e~~~l~~l~h~ni--v~~~~~~~~~ 274 (496)
...|| .|+.|+||.+... +..+++|.+.... +......+.+|+.++.++.|+++ +..+++....
T Consensus 36 ~~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~ 114 (239)
T PRK01723 36 ARVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR 114 (239)
T ss_pred CceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence 34688 8999999999884 6788999885421 01223467889999999998875 6667664432
Q ss_pred C----eEEEEEEecCC-CChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEE
Q 011005 275 K----CMFLIYEYMER-GSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFV 349 (496)
Q Consensus 275 ~----~~~lV~e~~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl 349 (496)
. ..++|||+++| .+|.+++... .++.. .+.+++.++.+|| ..||+||||||+|||++.++.++|
T Consensus 115 ~~~~~~~~lV~e~l~G~~~L~~~l~~~----~l~~~----~~~~i~~~l~~lH---~~GI~HrDlkp~NILv~~~~~v~L 183 (239)
T PRK01723 115 HGLFYRADILIERIEGARDLVALLQEA----PLSEE----QWQAIGQLIARFH---DAGVYHADLNAHNILLDPDGKFWL 183 (239)
T ss_pred cCcceeeeEEEEecCCCCCHHHHHhcC----CCCHH----HHHHHHHHHHHHH---HCCCCCCCCCchhEEEcCCCCEEE
Confidence 2 23599999997 6888887642 33433 3578999999999 789999999999999999899999
Q ss_pred ccccccccc
Q 011005 350 ADFGTARLL 358 (496)
Q Consensus 350 ~Dfg~~~~~ 358 (496)
+|||.+...
T Consensus 184 IDfg~~~~~ 192 (239)
T PRK01723 184 IDFDRGELR 192 (239)
T ss_pred EECCCcccC
Confidence 999998654
No 436
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.56 E-value=4e-16 Score=128.63 Aligned_cols=114 Identities=30% Similarity=0.524 Sum_probs=105.8
Q ss_pred CccccCChhccCCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCC-CCC
Q 011005 2 YKIGIIPPEIGNLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQG-SIP 80 (496)
Q Consensus 2 n~~~~lp~~~~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~-~~~ 80 (496)
|+++.+|+.+..|.+|+.|++++|+|+ .+|..++++++|+.|+++-|++. .+|..|+.+|.|+.|||++|++.. .+|
T Consensus 43 NKl~~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~levldltynnl~e~~lp 120 (264)
T KOG0617|consen 43 NKLTVVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALEVLDLTYNNLNENSLP 120 (264)
T ss_pred CceeecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhhhhhccccccccccCC
Confidence 889999999999999999999999998 88999999999999999999999 899999999999999999999963 689
Q ss_pred ccccCcccccccccccccCCCCCCCCCCCCCccccccc
Q 011005 81 GEITKLSRLDYLNLSSNKLSGPVPFSNNDLSSMHTVVS 118 (496)
Q Consensus 81 ~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~l~~~~~ 118 (496)
+.|..|..|+.|+|++|.+. .+|...+++++|+-+..
T Consensus 121 gnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~l 157 (264)
T KOG0617|consen 121 GNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSL 157 (264)
T ss_pred cchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEee
Confidence 99999999999999999999 78888999999975543
No 437
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.52 E-value=8.4e-14 Score=139.43 Aligned_cols=141 Identities=21% Similarity=0.215 Sum_probs=98.6
Q ss_pred cceeeecCCeeEEEEEeCCCcEEEEEEcccchhHHH---------------------------------------HHHHH
Q 011005 210 RYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEELAF---------------------------------------IKSFK 250 (496)
Q Consensus 210 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~---------------------------------------~~~~~ 250 (496)
.+.||.|++|.||+|.+++|+.||||+.+....... .-.+.
T Consensus 122 ~~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~ 201 (437)
T TIGR01982 122 EKPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLR 201 (437)
T ss_pred CcceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHH
Confidence 367999999999999999999999999876421100 00234
Q ss_pred HHHHHHHhhc-----cccccccccee-ecCCeEEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHH-HHHHHHh
Q 011005 251 NEAQVLSQVL-----HRNIVKLYGYC-LHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAH-ALAYLHH 323 (496)
Q Consensus 251 ~e~~~l~~l~-----h~niv~~~~~~-~~~~~~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~-~l~~lh~ 323 (496)
+|+..+.++. ++++ .+-..+ ......++||||++|++|.+....... ..+ ...++.+++. .+..+|
T Consensus 202 ~Ea~n~~~~~~~~~~~~~v-~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~--~~~---~~~ia~~~~~~~l~ql~- 274 (437)
T TIGR01982 202 REAANASELGENFKNDPGV-YVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEA--GLD---RKALAENLARSFLNQVL- 274 (437)
T ss_pred HHHHHHHHHHHhcCCCCCE-EeCCEehhhcCCceEEEEeECCcccccHHHHHhc--CCC---HHHHHHHHHHHHHHHHH-
Confidence 4555555553 2332 222222 223456899999999999887653211 122 2346666665 467788
Q ss_pred CCCCCeEEeCCCCCceEecCCCCeEEcccccccccc
Q 011005 324 DCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLH 359 (496)
Q Consensus 324 ~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 359 (496)
..|++|+|++|.||++++++.++++|||++..+.
T Consensus 275 --~~g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~ 308 (437)
T TIGR01982 275 --RDGFFHADLHPGNIFVLKDGKIIALDFGIVGRLS 308 (437)
T ss_pred --hCCceeCCCCcccEEECCCCcEEEEeCCCeeECC
Confidence 7799999999999999999999999999998764
No 438
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.46 E-value=1.5e-13 Score=125.01 Aligned_cols=205 Identities=24% Similarity=0.329 Sum_probs=142.2
Q ss_pred HHhhcccccccccceeecCC-----eEEEEEEecCCCChhhhhhCCCC-CccCCHHHHHHHHHHHHHHHHHHHhCCCCCe
Q 011005 256 LSQVLHRNIVKLYGYCLHKK-----CMFLIYEYMERGSLFCNLHNNED-AVELDWAKRVNIVKAMAHALAYLHHDCSPSI 329 (496)
Q Consensus 256 l~~l~h~niv~~~~~~~~~~-----~~~lV~e~~~~g~L~~~l~~~~~-~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i 329 (496)
+-.+.|.|+|+++.|+.+.+ ...++.|||..|++...|++... ...+......+|+.||..||.|||+. ...|
T Consensus 121 llqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~-~Ppi 199 (458)
T KOG1266|consen 121 LLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSC-DPPI 199 (458)
T ss_pred HHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhcc-CCcc
Confidence 34456999999999997654 47899999999999999886432 22467777789999999999999987 8999
Q ss_pred EEeCCCCCceEecCCCCeEEccccccccccC----CCCCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCC
Q 011005 330 IHRDISSNNILLNSKLEAFVADFGTARLLHA----DSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGK 405 (496)
Q Consensus 330 ~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~----~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~ 405 (496)
+|+++.-+-|++..++-+|++--.-...... .......-.+-++|.|||+-.....+.++|||+||+...||.-|.
T Consensus 200 ihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemailE 279 (458)
T KOG1266|consen 200 IHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAILE 279 (458)
T ss_pred ccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHHHhe
Confidence 9999999999999998888753221111100 000112223567999999877777788999999999999998776
Q ss_pred CCCccccccCCCCCCcchhHhhhcCCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHh
Q 011005 406 HPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLIT 475 (496)
Q Consensus 406 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~ 475 (496)
.--.. ..+....+......+. .+..+. -..++.+|++..|..||++.+++.|+...
T Consensus 280 iq~tn---seS~~~~ee~ia~~i~-~len~l----------qr~~i~kcl~~eP~~rp~ar~llfHpllf 335 (458)
T KOG1266|consen 280 IQSTN---SESKVEVEENIANVII-GLENGL----------QRGSITKCLEGEPNGRPDARLLLFHPLLF 335 (458)
T ss_pred eccCC---Ccceeehhhhhhhhee-eccCcc----------ccCcCcccccCCCCCCcchhhhhcCceee
Confidence 54110 0011111111111111 111111 12456689999999999999999997654
No 439
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.45 E-value=8.1e-14 Score=137.44 Aligned_cols=253 Identities=26% Similarity=0.264 Sum_probs=183.2
Q ss_pred hCCCCcceeee--cCCeeEEEEEe---CCCcEEEEEEcccchh-HHHHHHHHHHHHHHHhhc-ccccccccceeecCCeE
Q 011005 205 EDFDIRYCIGT--GGYGSVYKAQL---PNGKVFALKKLHTSEE-LAFIKSFKNEAQVLSQVL-HRNIVKLYGYCLHKKCM 277 (496)
Q Consensus 205 ~~~~~~~~lg~--G~~g~Vy~~~~---~~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~ 277 (496)
..|.+.+.+|. |.+|.||.+.. .++..+|+|+-+.... ......=.+|+...++++ |+|.++.+..+...+..
T Consensus 114 ~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~l 193 (524)
T KOG0601|consen 114 QRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGIL 193 (524)
T ss_pred hhcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCcc
Confidence 46777888999 99999999965 4678899988433211 111233357777777785 99999999999999999
Q ss_pred EEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHH----HHHHHHhCCCCCeEEeCCCCCceEecCC-CCeEEccc
Q 011005 278 FLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAH----ALAYLHHDCSPSIIHRDISSNNILLNSK-LEAFVADF 352 (496)
Q Consensus 278 ~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~----~l~~lh~~~~~~i~H~dlkp~Nil~~~~-~~~kl~Df 352 (496)
++-+|++. .++..+.+.... -++....+.+..+..+ |+.++| ...++|-|+||.||+...+ ...+++||
T Consensus 194 fiqtE~~~-~sl~~~~~~~~~--~~p~~~l~~~~~~~~~~~~~al~~~h---s~~~~~~~~kp~~i~~~~~~~s~~~~df 267 (524)
T KOG0601|consen 194 FIQTELCG-ESLQSYCHTPCN--FLPDNLLWNSLRDWLSRDVTALSHLH---SNNIVHDDLKPANIFTTSDWTSCKLTDF 267 (524)
T ss_pred eeeecccc-chhHHhhhcccc--cCCchhhhhHHhhhhhcccccccccC---CCcccccccchhheecccccceeecCCc
Confidence 99999885 677766654321 3667777888888888 999999 7899999999999999999 88999999
Q ss_pred cccccccCCCCCccc-----cccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccc--cccCCCCCCcchhH
Q 011005 353 GTARLLHADSSNRTL-----LAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDIL--SSLSSSSDPKIMLI 425 (496)
Q Consensus 353 g~~~~~~~~~~~~~~-----~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~--~~~~~~~~~~~~~~ 425 (496)
|+...+......... ..|...|++||...+ .++..+|+||+|.++.+..+|-.+.... ..+.. ..
T Consensus 268 ~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~-l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~-------~r 339 (524)
T KOG0601|consen 268 GLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNG-LATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQ-------LR 339 (524)
T ss_pred ceeEEccCCccccceeeeecCCCCceEeChhhhcc-ccchHhhhcchhhhhHhhHhhcccccCCCCCCccc-------cc
Confidence 999888665432222 257788999997665 5688999999999999998876664321 11000 00
Q ss_pred hhhcCCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhcc
Q 011005 426 DVLDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRK 477 (496)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~ 477 (496)
. ..++.+... .....+...+..|++.+|..|++.+.+..+.++...
T Consensus 340 ~---~~ip~e~~~---~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s~ 385 (524)
T KOG0601|consen 340 Q---GYIPLEFCE---GGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHSK 385 (524)
T ss_pred c---ccCchhhhc---CcchhhhhHHHHhcCcchhhhhHHHHHhccccccch
Confidence 0 001111111 111123347778999999999999999888777643
No 440
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.45 E-value=2.7e-13 Score=137.23 Aligned_cols=145 Identities=19% Similarity=0.199 Sum_probs=92.6
Q ss_pred HHhCCCCcceeeecCCeeEEEEEeCC-CcEEEEEEcccchhH---------------------------------HHHHH
Q 011005 203 ATEDFDIRYCIGTGGYGSVYKAQLPN-GKVFALKKLHTSEEL---------------------------------AFIKS 248 (496)
Q Consensus 203 ~~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~---------------------------------~~~~~ 248 (496)
....|+. +.||.|++|.||+|.+++ |+.||||+.+..-.. +..+.
T Consensus 118 ~F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~ 196 (537)
T PRK04750 118 WFDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKT 196 (537)
T ss_pred HHHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHH
Confidence 3456776 789999999999999887 999999999754210 11122
Q ss_pred HHHHHHHHHhhcccccccccceeec-------------CCeEEEEEEecCCCChhhh--hhCCC-CCccCCHHHHHHHHH
Q 011005 249 FKNEAQVLSQVLHRNIVKLYGYCLH-------------KKCMFLIYEYMERGSLFCN--LHNNE-DAVELDWAKRVNIVK 312 (496)
Q Consensus 249 ~~~e~~~l~~l~h~niv~~~~~~~~-------------~~~~~lV~e~~~~g~L~~~--l~~~~-~~~~~~~~~~~~i~~ 312 (496)
+.+|++..... +|+.++...+.. ....++||||++|+.+.+. +...+ +...+....+..++.
T Consensus 197 l~~ElD~~~Ea--~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~ 274 (537)
T PRK04750 197 LHDELDLMREA--ANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFT 274 (537)
T ss_pred HHHhhCHHHHH--HHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHH
Confidence 23333333333 233333322222 3345799999999999764 22211 111122222223333
Q ss_pred HHHHHHHHHHhCCCCCeEEeCCCCCceEecCCC----CeEEccccccccccC
Q 011005 313 AMAHALAYLHHDCSPSIIHRDISSNNILLNSKL----EAFVADFGTARLLHA 360 (496)
Q Consensus 313 ~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~----~~kl~Dfg~~~~~~~ 360 (496)
|+ . ..|++|+|++|.||+++.++ .++++|||++..+..
T Consensus 275 Qi-------f---~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~ 316 (537)
T PRK04750 275 QV-------F---RDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK 316 (537)
T ss_pred HH-------H---hCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence 33 2 45999999999999999888 999999999987743
No 441
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.44 E-value=2.8e-12 Score=127.89 Aligned_cols=168 Identities=14% Similarity=0.150 Sum_probs=128.1
Q ss_pred EeCCCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEecCCCChhhhhhCCCCCccCCH
Q 011005 225 QLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDW 304 (496)
Q Consensus 225 ~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~~~~g~L~~~l~~~~~~~~~~~ 304 (496)
+..++.+|.|...+.... .......+.++.++.++||||+++++.++..+..|+|+|.+. .|..++... ..
T Consensus 33 ~k~~~~~vsVF~~~~~~~-~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk~l------~~ 103 (690)
T KOG1243|consen 33 RKADGGPVSVFVYKRSNG-EVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR--PLETVLKEL------GK 103 (690)
T ss_pred eeccCCceEEEEEeCCCc-hhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc--cHHHHHHHh------HH
Confidence 344677888877766554 444667888999999999999999999999999999999984 566666643 34
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCCCccccccccccccccccccCC
Q 011005 305 AKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYTMV 384 (496)
Q Consensus 305 ~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~ 384 (496)
......++||+.||.+||+ +++++|++|+-+-|+++..|+.||++|.++...............--.|..|+.+....
T Consensus 104 ~~v~~Gl~qIl~AL~FL~~--d~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~~~~~~~~~~s~~~P~~~~~s~ 181 (690)
T KOG1243|consen 104 EEVCLGLFQILAALSFLND--DCNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNAPAKSLYLIESFDDPEEIDPSE 181 (690)
T ss_pred HHHHHHHHHHHHHHHHHhc--cCCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCcccccchhhhcccChhhcCccc
Confidence 5555678999999999997 56999999999999999999999999999866543332112222223466666544333
Q ss_pred cCcccchhhHHHHHHHHHhCC
Q 011005 385 MTEKCDVYSFGVVTLEVLMGK 405 (496)
Q Consensus 385 ~~~~~DvwslG~il~el~~g~ 405 (496)
-..|.|-||++++|++.|.
T Consensus 182 --~s~D~~~Lg~li~el~ng~ 200 (690)
T KOG1243|consen 182 --WSIDSWGLGCLIEELFNGS 200 (690)
T ss_pred --cchhhhhHHHHHHHHhCcc
Confidence 3469999999999999993
No 442
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.42 E-value=1e-14 Score=120.37 Aligned_cols=115 Identities=31% Similarity=0.487 Sum_probs=100.4
Q ss_pred CCccccCChhccCCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCC-CCCchhhcCCcccCeecccccccCCCC
Q 011005 1 MYKIGIIPPEIGNLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLS-GKIPPEIASMKYLTQLDLSNNNIQGSI 79 (496)
Q Consensus 1 ~n~~~~lp~~~~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~-~~~p~~~~~l~~L~~l~l~~N~l~~~~ 79 (496)
.|+|..+|.+++.|++|+.|+++-|++. .+|..|+.++.|+.|||++|++. ..+|..|..|+.|+-|+|+.|.+. .+
T Consensus 65 nnqie~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~levldltynnl~e~~lpgnff~m~tlralyl~dndfe-~l 142 (264)
T KOG0617|consen 65 NNQIEELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALEVLDLTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-IL 142 (264)
T ss_pred cchhhhcChhhhhchhhhheecchhhhh-cCccccCCCchhhhhhccccccccccCCcchhHHHHHHHHHhcCCCcc-cC
Confidence 3789999999999999999999999998 89999999999999999999986 347888888888888888888888 88
Q ss_pred CccccCcccccccccccccCCCCCCCCCCCCCccccccc
Q 011005 80 PGEITKLSRLDYLNLSSNKLSGPVPFSNNDLSSMHTVVS 118 (496)
Q Consensus 80 ~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~l~~~~~ 118 (496)
|..++.+++|+.|.+..|.+- .+|..++.++.|+.+..
T Consensus 143 p~dvg~lt~lqil~lrdndll-~lpkeig~lt~lrelhi 180 (264)
T KOG0617|consen 143 PPDVGKLTNLQILSLRDNDLL-SLPKEIGDLTRLRELHI 180 (264)
T ss_pred ChhhhhhcceeEEeeccCchh-hCcHHHHHHHHHHHHhc
Confidence 888888888888888888887 67888888888877654
No 443
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.41 E-value=3.9e-13 Score=150.16 Aligned_cols=113 Identities=42% Similarity=0.630 Sum_probs=99.1
Q ss_pred CCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCCCCccccCccccccc
Q 011005 13 NLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGSIPGEITKLSRLDYL 92 (496)
Q Consensus 13 ~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~l~~L~~l 92 (496)
.+++|+.|+|++|++++.+|..|.++++|+.|+|++|++++.+|+.+..+++|+.|+|++|++++.+|..+..+++|+.|
T Consensus 473 ~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 552 (968)
T PLN00113 473 GSKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQL 552 (968)
T ss_pred ccccceEEECcCCccCCccChhhhhhhccCEEECcCCcceeeCChHHcCccCCCEEECCCCcccccCChhHhCcccCCEE
Confidence 45678888888888888888889999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCCCCccccccccCCCCCCC
Q 011005 93 NLSSNKLSGPVPFSNNDLSSMHTVVSLSPNNGLC 126 (496)
Q Consensus 93 ~l~~n~l~~~~~~~~~~l~~l~~~~~~~~n~~~c 126 (496)
++++|++++.+|..+..+++|+.+ +++.|+..+
T Consensus 553 ~Ls~N~l~~~~p~~l~~l~~L~~l-~ls~N~l~~ 585 (968)
T PLN00113 553 DLSQNQLSGEIPKNLGNVESLVQV-NISHNHLHG 585 (968)
T ss_pred ECCCCcccccCChhHhcCcccCEE-eccCCccee
Confidence 999999999999999999888654 566666443
No 444
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.39 E-value=7e-12 Score=110.29 Aligned_cols=138 Identities=18% Similarity=0.191 Sum_probs=99.4
Q ss_pred cceeeecCCeeEEEEEeCC-------CcEEEEEEcccch------------h---------HHHHHH----HHHHHHHHH
Q 011005 210 RYCIGTGGYGSVYKAQLPN-------GKVFALKKLHTSE------------E---------LAFIKS----FKNEAQVLS 257 (496)
Q Consensus 210 ~~~lg~G~~g~Vy~~~~~~-------~~~vavK~~~~~~------------~---------~~~~~~----~~~e~~~l~ 257 (496)
...||.|--+.||.|...+ +..+|||..+... + ....+. ..+|+..|+
T Consensus 2 ~g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~ 81 (197)
T cd05146 2 NGCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLK 81 (197)
T ss_pred CCccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHH
Confidence 3569999999999996543 5799999886421 0 001122 248999999
Q ss_pred hhcc--cccccccceeecCCeEEEEEEecCCCChhh-hhhCCCCCccCCHHHHHHHHHHHHHHHHHH-HhCCCCCeEEeC
Q 011005 258 QVLH--RNIVKLYGYCLHKKCMFLIYEYMERGSLFC-NLHNNEDAVELDWAKRVNIVKAMAHALAYL-HHDCSPSIIHRD 333 (496)
Q Consensus 258 ~l~h--~niv~~~~~~~~~~~~~lV~e~~~~g~L~~-~l~~~~~~~~~~~~~~~~i~~~i~~~l~~l-h~~~~~~i~H~d 333 (496)
++.. -++..++++ ...++||||+.++.+.. .+... .++..+...+..+++.++..+ | ..+++|||
T Consensus 82 rl~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd~----~~~~~~~~~i~~~i~~~l~~l~H---~~glVHGD 150 (197)
T cd05146 82 RMQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKDA----KLNDEEMKNAYYQVLSMMKQLYK---ECNLVHAD 150 (197)
T ss_pred HHHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhcc----ccCHHHHHHHHHHHHHHHHHHHH---hCCeecCC
Confidence 9964 455666654 34679999997654422 22211 344456677889999999999 7 77999999
Q ss_pred CCCCceEecCCCCeEEcccccccccc
Q 011005 334 ISSNNILLNSKLEAFVADFGTARLLH 359 (496)
Q Consensus 334 lkp~Nil~~~~~~~kl~Dfg~~~~~~ 359 (496)
|++.||++++ +.+.++|||.+....
T Consensus 151 Ls~~NIL~~~-~~v~iIDF~qav~~~ 175 (197)
T cd05146 151 LSEYNMLWHD-GKVWFIDVSQSVEPT 175 (197)
T ss_pred CCHHHEEEEC-CcEEEEECCCceeCC
Confidence 9999999974 679999999997654
No 445
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.37 E-value=2.9e-12 Score=112.31 Aligned_cols=127 Identities=23% Similarity=0.300 Sum_probs=94.6
Q ss_pred ceeeecCCeeEEEEEeCCCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccc-cccceeecCCeEEEEEEecCCCCh
Q 011005 211 YCIGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIV-KLYGYCLHKKCMFLIYEYMERGSL 289 (496)
Q Consensus 211 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv-~~~~~~~~~~~~~lV~e~~~~g~L 289 (496)
+.++.|.++.||++... ++.|++|........ ...+.+|+.+++.+.+.+++ +++.+.. ...++||||++|.++
T Consensus 4 ~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~~--~~~~~~E~~~l~~l~~~~~~P~~~~~~~--~~~~lv~e~i~G~~l 78 (170)
T cd05151 4 SPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTEL--LINRENEAENSKLAAEAGIGPKLYYFDP--ETGVLITEFIEGSEL 78 (170)
T ss_pred eecCCcccCceEEEEEC-CeEEEEEeCCCCccc--ccCHHHHHHHHHHHHHhCCCCceEEEeC--CCCeEEEEecCCCcc
Confidence 56889999999999875 778999987654321 23467899999999765554 4444432 234799999999887
Q ss_pred hhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCC-----eEEeCCCCCceEecCCCCeEEcccccccc
Q 011005 290 FCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPS-----IIHRDISSNNILLNSKLEAFVADFGTARL 357 (496)
Q Consensus 290 ~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~-----i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 357 (496)
.+. . . . ...++.+++++++.|| ..+ ++|+|++|.||+++ ++.++++|||.+..
T Consensus 79 ~~~----~---~-~---~~~~~~~l~~~l~~LH---~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~ 136 (170)
T cd05151 79 LTE----D---F-S---DPENLEKIAKLLKKLH---SSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGM 136 (170)
T ss_pred ccc----c---c-c---CHHHHHHHHHHHHHHh---CCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence 643 0 1 1 1235678999999999 445 59999999999999 66899999998853
No 446
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.30 E-value=1.6e-12 Score=128.31 Aligned_cols=250 Identities=20% Similarity=0.189 Sum_probs=178.3
Q ss_pred HHhCCCCcceeeecCCeeEEEEEe--CCCcEEEEEEcccchhHHH-HHHHHHHHHHHHhhc-ccccccccceeecCCeEE
Q 011005 203 ATEDFDIRYCIGTGGYGSVYKAQL--PNGKVFALKKLHTSEELAF-IKSFKNEAQVLSQVL-HRNIVKLYGYCLHKKCMF 278 (496)
Q Consensus 203 ~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~~vavK~~~~~~~~~~-~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~ 278 (496)
-..+|..+..||.|.|+.|++... .++..|++|.....-.... ...-..|+.+...+. |.+++.....+......+
T Consensus 263 ~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~ 342 (524)
T KOG0601|consen 263 KLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGY 342 (524)
T ss_pred ecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCcccccccc
Confidence 456788899999999999999843 4688999998866432111 122356777777774 899999888887777778
Q ss_pred EEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCC-CCeEEcccccccc
Q 011005 279 LIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSK-LEAFVADFGTARL 357 (496)
Q Consensus 279 lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~-~~~kl~Dfg~~~~ 357 (496)
+=-|||+++++.....- ...++....+.+..|++.++.++| ++.++|+|++|+||++..+ +..+++|||+++.
T Consensus 343 ip~e~~~~~s~~l~~~~---~~~~d~~~~~~~~~q~~~~l~~i~---s~~~~~~d~~psni~i~~~~~~~~~~~~~~~t~ 416 (524)
T KOG0601|consen 343 IPLEFCEGGSSSLRSVT---SQMLDEDPRLRLTAQILTALNVIH---SKLFVHLDVKPSNILISNDGFFSKLGDFGCWTR 416 (524)
T ss_pred CchhhhcCcchhhhhHH---HHhcCcchhhhhHHHHHhcccccc---chhhhcccccccceeeccchhhhhccccccccc
Confidence 99999999988765522 225677788899999999999999 8899999999999999886 7889999999975
Q ss_pred ccCCCCCccccccccccc--cccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCC
Q 011005 358 LHADSSNRTLLAGTYGYI--APELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPP 435 (496)
Q Consensus 358 ~~~~~~~~~~~~gt~~y~--aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (496)
+.... ....+.-++. +|+......+..+.|++|||..+.+.++|..--.... ....+.....+..
T Consensus 417 ~~~~~---~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~----------~~~~i~~~~~p~~ 483 (524)
T KOG0601|consen 417 LAFSS---GVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGV----------QSLTIRSGDTPNL 483 (524)
T ss_pred cceec---ccccccccccccchhhccccccccccccccccccccccccCcccCcccc----------cceeeecccccCC
Confidence 32211 1122233344 5666667788889999999999999998875422111 1111111222211
Q ss_pred CChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhc
Q 011005 436 VDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITR 476 (496)
Q Consensus 436 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~ 476 (496)
... ...+..+...+..+|+..||.+.++..+..+.+
T Consensus 484 ~~~-----~~~~q~~~kv~~~~~~~~~~l~~~l~~~~~~~~ 519 (524)
T KOG0601|consen 484 PGL-----KLQLQVLLKVMINPDRKRRPSAVELSLHSEFYR 519 (524)
T ss_pred Cch-----HHhhhhhhhhhcCCccccchhhhhhcccchhhh
Confidence 111 123556677899999999999999988766544
No 447
>PLN03150 hypothetical protein; Provisional
Probab=99.29 E-value=9.1e-12 Score=130.62 Aligned_cols=95 Identities=33% Similarity=0.575 Sum_probs=88.6
Q ss_pred cCChhccCCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCCCCccccC
Q 011005 6 IIPPEIGNLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGSIPGEITK 85 (496)
Q Consensus 6 ~lp~~~~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~ 85 (496)
.+|..+++|++|+.|+|++|++.|.+|..++.+++|+.|+|++|+|++.+|+.+.+|++|+.|+|++|++++.+|..+..
T Consensus 433 ~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~ 512 (623)
T PLN03150 433 FIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRVPAALGG 512 (623)
T ss_pred cCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcCCcccccCChHHhh
Confidence 58889999999999999999999999999999999999999999999999999999999999999999999999998876
Q ss_pred c-ccccccccccccCC
Q 011005 86 L-SRLDYLNLSSNKLS 100 (496)
Q Consensus 86 l-~~L~~l~l~~n~l~ 100 (496)
+ .++..+++.+|...
T Consensus 513 ~~~~~~~l~~~~N~~l 528 (623)
T PLN03150 513 RLLHRASFNFTDNAGL 528 (623)
T ss_pred ccccCceEEecCCccc
Confidence 4 46788999998754
No 448
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=99.26 E-value=4.1e-13 Score=125.13 Aligned_cols=115 Identities=30% Similarity=0.517 Sum_probs=82.8
Q ss_pred CccccCChhccCCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhc-CCcccCeecccccccCCCCC
Q 011005 2 YKIGIIPPEIGNLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIA-SMKYLTQLDLSNNNIQGSIP 80 (496)
Q Consensus 2 n~~~~lp~~~~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~-~l~~L~~l~l~~N~l~~~~~ 80 (496)
|-++.+|++++.|.+|..|||..|.|. .+| .|+++..|.+|+++.|+|+ .+|.... .+++|..|||..|+++ .+|
T Consensus 193 N~L~tlP~~lg~l~~L~~LyL~~Nki~-~lP-ef~gcs~L~Elh~g~N~i~-~lpae~~~~L~~l~vLDLRdNklk-e~P 268 (565)
T KOG0472|consen 193 NLLETLPPELGGLESLELLYLRRNKIR-FLP-EFPGCSLLKELHVGENQIE-MLPAEHLKHLNSLLVLDLRDNKLK-EVP 268 (565)
T ss_pred hhhhcCChhhcchhhhHHHHhhhcccc-cCC-CCCccHHHHHHHhcccHHH-hhHHHHhcccccceeeeccccccc-cCc
Confidence 556777777777777777777777776 556 6777777777777777777 5666554 7778888888888887 777
Q ss_pred ccccCcccccccccccccCCCCCCCCCCCCCccccccccCCCC
Q 011005 81 GEITKLSRLDYLNLSSNKLSGPVPFSNNDLSSMHTVVSLSPNN 123 (496)
Q Consensus 81 ~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~l~~~~~~~~n~ 123 (496)
..++-+++|..||+++|.|+ ..|.+++++ .|.. +.+.+||
T Consensus 269 de~clLrsL~rLDlSNN~is-~Lp~sLgnl-hL~~-L~leGNP 308 (565)
T KOG0472|consen 269 DEICLLRSLERLDLSNNDIS-SLPYSLGNL-HLKF-LALEGNP 308 (565)
T ss_pred hHHHHhhhhhhhcccCCccc-cCCcccccc-eeee-hhhcCCc
Confidence 77788888888888888887 567777777 5533 3444443
No 449
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.24 E-value=1.3e-10 Score=98.66 Aligned_cols=131 Identities=19% Similarity=0.319 Sum_probs=101.6
Q ss_pred eeeecCCeeEEEEEeCCCcEEEEEEcccch------h-HHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEec
Q 011005 212 CIGTGGYGSVYKAQLPNGKVFALKKLHTSE------E-LAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEYM 284 (496)
Q Consensus 212 ~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~------~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~~ 284 (496)
.+++|+-+.+|.+.+.+ ..+++|.-.... + .-....-.+|+.++.++.--+|.-.+-+..+.+...|+|||.
T Consensus 3 ~i~~GAEa~i~~~~~~g-~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~I 81 (204)
T COG3642 3 LIKQGAEAIIYLTDFLG-LPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEYI 81 (204)
T ss_pred hhhCCcceeEEeeeccC-cceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEEe
Confidence 47899999999998744 446666432211 1 112234578999999998777776677777777788999999
Q ss_pred CCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEcccccccc
Q 011005 285 ERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARL 357 (496)
Q Consensus 285 ~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 357 (496)
+|..|.+.+... ...++..+-.-+.-|| ..||+|+||.++||.++.+. +.++|||++..
T Consensus 82 ~G~~lkd~l~~~----------~~~~~r~vG~~vg~lH---~~givHGDLTtsNiIl~~~~-i~~IDfGLg~~ 140 (204)
T COG3642 82 EGELLKDALEEA----------RPDLLREVGRLVGKLH---KAGIVHGDLTTSNIILSGGR-IYFIDFGLGEF 140 (204)
T ss_pred CChhHHHHHHhc----------chHHHHHHHHHHHHHH---hcCeecCCCccceEEEeCCc-EEEEECCcccc
Confidence 999998888764 1346677788888999 88999999999999999875 89999999964
No 450
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.24 E-value=6.5e-11 Score=108.56 Aligned_cols=143 Identities=22% Similarity=0.283 Sum_probs=109.6
Q ss_pred ceeeecCCeeEEEEEeCCCcEEEEEEcccchhHHHHHHHHHHHHHHHhhccc--ccccccceeecCC---eEEEEEEecC
Q 011005 211 YCIGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHR--NIVKLYGYCLHKK---CMFLIYEYME 285 (496)
Q Consensus 211 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~--niv~~~~~~~~~~---~~~lV~e~~~ 285 (496)
+.|+.|..+.||++...+|+.+++|.............+.+|+++++.+.+. .+.+++.+..... ..++||||++
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~ 83 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVD 83 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeC
Confidence 5689999999999988777899999986643222235678999999999753 4566777766542 5689999999
Q ss_pred CCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCC----------------------------------------
Q 011005 286 RGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDC---------------------------------------- 325 (496)
Q Consensus 286 ~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~---------------------------------------- 325 (496)
|.++.+.+.. ..++......++.+++++|..||+..
T Consensus 84 G~~l~~~~~~----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (223)
T cd05154 84 GRVLRDRLLR----PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMER 159 (223)
T ss_pred CEecCCCCCC----CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHH
Confidence 9888765532 14566777778888888888888521
Q ss_pred -------------CCCeEEeCCCCCceEecC--CCCeEEcccccccc
Q 011005 326 -------------SPSIIHRDISSNNILLNS--KLEAFVADFGTARL 357 (496)
Q Consensus 326 -------------~~~i~H~dlkp~Nil~~~--~~~~kl~Dfg~~~~ 357 (496)
...++|+|+.|.||+++. ++.+.++||+.+..
T Consensus 160 ~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 160 LLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred HHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 256799999999999998 56688999998753
No 451
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.22 E-value=3.5e-10 Score=95.42 Aligned_cols=144 Identities=18% Similarity=0.230 Sum_probs=106.8
Q ss_pred CcceeeecCCeeEEEEEeCCCcEEEEEEcccch------h-HHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEE
Q 011005 209 IRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSE------E-LAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIY 281 (496)
Q Consensus 209 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~------~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~ 281 (496)
....+.+|+-+.|+++.+ .|+.++||.-.... + .-..++..+|++.+.++.--+|.-..-++.+...-.++|
T Consensus 11 ~l~likQGAEArv~~~~~-~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~M 89 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSF-SGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYM 89 (229)
T ss_pred cceeeeccceeeEeeecc-CCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEE
Confidence 567799999999999998 56777777543321 1 112345678999999998667666666676666678999
Q ss_pred EecCC-CChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCC---eEEcccccccc
Q 011005 282 EYMER-GSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLE---AFVADFGTARL 357 (496)
Q Consensus 282 e~~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~---~kl~Dfg~~~~ 357 (496)
||++| .++.+++........ .......++.+|-+.+.-|| ..+++||||..+||++..++. +.++|||++..
T Consensus 90 E~~~g~~~vk~~i~~~~~~~~-~d~~~~~~~~~iG~~igklH---~ndiiHGDLTTSNill~~~~~~~~~~lIdfgls~~ 165 (229)
T KOG3087|consen 90 EFIDGASTVKDFILSTMEDES-EDEGLAELARRIGELIGKLH---DNDIIHGDLTTSNILLRSDGNQITPILIDFGLSSV 165 (229)
T ss_pred EeccchhHHHHHHHHHccCcc-cchhHHHHHHHHHHHHHHhh---hCCeecccccccceEEecCCCcCceEEEeecchhc
Confidence 99987 467777765443322 22233678899999999999 889999999999999976653 57999999854
No 452
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.20 E-value=4.7e-12 Score=131.60 Aligned_cols=249 Identities=21% Similarity=0.275 Sum_probs=167.7
Q ss_pred HHhCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchh--HHHHHHHHHHHHHHHhhcccccccccceeecCCeEEE
Q 011005 203 ATEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEE--LAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFL 279 (496)
Q Consensus 203 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 279 (496)
..+.+.+.+-+..|.++.++.+.-. .|...++|....... ....+....+-.+.-...+|-++...-.+.-....++
T Consensus 802 S~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~L 881 (1205)
T KOG0606|consen 802 SPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLPL 881 (1205)
T ss_pred CCccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcch
Confidence 3456777778888999999887432 333334443332211 0011222223333333345656655544444556789
Q ss_pred EEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEcccccccccc
Q 011005 280 IYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLH 359 (496)
Q Consensus 280 V~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 359 (496)
|++|..++++...++... ..+.+........+..++++|| ...+.|+|++|.|.+...+++.+++|||......
T Consensus 882 ~~~~~~~~~~~Skl~~~~---~~saepaRs~i~~~vqs~e~L~---s~~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg 955 (1205)
T KOG0606|consen 882 VGHYLNGGDLPSKLHNSG---CLSAEPARSPILERVQSLESLH---SSLRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVG 955 (1205)
T ss_pred hhHHhccCCchhhhhcCC---CcccccccchhHHHHhhhhccc---cchhhcccccccchhhcccCCcccCccccccccc
Confidence 999999999999988765 3444555667778899999999 6668999999999999999999999998433211
Q ss_pred CC---------------------C----------CCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCC
Q 011005 360 AD---------------------S----------SNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPR 408 (496)
Q Consensus 360 ~~---------------------~----------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~ 408 (496)
-- . .......+|+.|.+||...+......+|.|+.|++++|.++|..||
T Consensus 956 ~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~ 1035 (1205)
T KOG0606|consen 956 LIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPF 1035 (1205)
T ss_pred cccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCC
Confidence 00 0 0012245899999999999999999999999999999999999999
Q ss_pred ccccccCCCCCCcchhHhhhcCCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHH
Q 011005 409 DILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQ 466 (496)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ 466 (496)
.. ..+......+....++.+.. .........+++.+.+..+|.+|..+.
T Consensus 1036 na-------~tpq~~f~ni~~~~~~~p~g--~~~~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1036 NA-------ETPQQIFENILNRDIPWPEG--PEEGSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred CC-------cchhhhhhccccCCCCCCCC--ccccChhhhhhhhhhhccCchhccCcc
Confidence 73 33333334444444433322 222233466788889999999999876
No 453
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=99.16 E-value=2.1e-09 Score=101.83 Aligned_cols=258 Identities=16% Similarity=0.188 Sum_probs=164.0
Q ss_pred CCcceeeecCCeeEEEEEeCCCcEEEEEEcccchhHHHHHHHHHHHHHHHhh-cccccccccce------e-ecCCeEEE
Q 011005 208 DIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQV-LHRNIVKLYGY------C-LHKKCMFL 279 (496)
Q Consensus 208 ~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~------~-~~~~~~~l 279 (496)
.....||+|+.+.+|-.- .-...+.|+++....... ...+..|... .||-+-.=+.+ . ..+....+
T Consensus 14 ~~gr~LgqGgea~ly~l~--e~~d~VAKIYh~Pppa~~----aqk~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~iGf 87 (637)
T COG4248 14 PPGRPLGQGGEADLYTLG--EVRDQVAKIYHAPPPAAQ----AQKVAELAATPDAPLLNYRVAWPQATLHGGRRGKVIGF 87 (637)
T ss_pred CCCccccCCccceeeecc--hhhchhheeecCCCchHH----HHHHHHhccCCCCcchhhhhcccHHHhhCCCccceeEE
Confidence 346679999999999752 122336677766432211 1123334333 35543321111 1 11223667
Q ss_pred EEEecCCCCh-hhhh---hCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEcccccc
Q 011005 280 IYEYMERGSL-FCNL---HNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTA 355 (496)
Q Consensus 280 V~e~~~~g~L-~~~l---~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~ 355 (496)
.|..+.|.-- .++. .+..+....+|.-.+..++.++.+.+.|| ..|.+-||++++|+|+++++.|.|.|=..-
T Consensus 88 lmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH---~~Gh~vGDVn~~~~lVsd~~~V~LVdsDsf 164 (637)
T COG4248 88 LMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLH---EHGHVVGDVNQNSFLVSDDSKVVLVDSDSF 164 (637)
T ss_pred ecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHH---hcCCcccccCccceeeecCceEEEEcccce
Confidence 7887766422 1111 22334456889999999999999999999 789999999999999999999999874432
Q ss_pred ccccCCCCCccccccccccccccccc-----cCCcCcccchhhHHHHHHHHHhC-CCCCccccccCCCCCCcc-hh----
Q 011005 356 RLLHADSSNRTLLAGTYGYIAPELAY-----TMVMTEKCDVYSFGVVTLEVLMG-KHPRDILSSLSSSSDPKI-ML---- 424 (496)
Q Consensus 356 ~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwslG~il~el~~g-~~p~~~~~~~~~~~~~~~-~~---- 424 (496)
... ..+......+|.+.|.+||... +..-+...|-|.+|+++++++.| ++||...........+.+ .+
T Consensus 165 qi~-~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~Ia~g~ 243 (637)
T COG4248 165 QIN-ANGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDIAHGR 243 (637)
T ss_pred eec-cCCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhhhcce
Confidence 221 2222344467899999999754 44556789999999999999886 999976554333222222 11
Q ss_pred ----HhhhcCCCCCCCChhHHHHHHHHHHHHHhcccC--CCCCCCCHHHHHHHHHHh
Q 011005 425 ----IDVLDQRLPPPVDRKVIRDILLISTVSFACLQS--NPKSRPTMQSVSQEFLIT 475 (496)
Q Consensus 425 ----~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~--dP~~Rps~~evl~~~~~~ 475 (496)
.+.-....+.+.+-........+..++.+|+.. .|.-|||++.++.-+-..
T Consensus 244 f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~al 300 (637)
T COG4248 244 FAYASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAALDAL 300 (637)
T ss_pred eeechhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHH
Confidence 111123344444444555556677788888865 467899999987765443
No 454
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.15 E-value=3.5e-12 Score=125.23 Aligned_cols=112 Identities=29% Similarity=0.459 Sum_probs=72.9
Q ss_pred CccccCChhccCCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccC-CCCC
Q 011005 2 YKIGIIPPEIGNLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQ-GSIP 80 (496)
Q Consensus 2 n~~~~lp~~~~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~-~~~~ 80 (496)
|++..+|+.+.++++|+.|+||+|+|+ .+.-..+...+|++|+||.|+++ .+|+.++.|++|+.|++.+|+++ .-+|
T Consensus 232 N~Lp~vPecly~l~~LrrLNLS~N~it-eL~~~~~~W~~lEtLNlSrNQLt-~LP~avcKL~kL~kLy~n~NkL~FeGiP 309 (1255)
T KOG0444|consen 232 NNLPIVPECLYKLRNLRRLNLSGNKIT-ELNMTEGEWENLETLNLSRNQLT-VLPDAVCKLTKLTKLYANNNKLTFEGIP 309 (1255)
T ss_pred cCCCcchHHHhhhhhhheeccCcCcee-eeeccHHHHhhhhhhccccchhc-cchHHHhhhHHHHHHHhccCcccccCCc
Confidence 667777777777777777777777776 44445556666666666777666 56677777777777766666663 1356
Q ss_pred ccccCcccccccccccccCCCCCCCCCCCCCccccc
Q 011005 81 GEITKLSRLDYLNLSSNKLSGPVPFSNNDLSSMHTV 116 (496)
Q Consensus 81 ~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~l~~~ 116 (496)
++++.|.+|+.+..++|.+. ..|..++.+..|+.|
T Consensus 310 SGIGKL~~Levf~aanN~LE-lVPEglcRC~kL~kL 344 (1255)
T KOG0444|consen 310 SGIGKLIQLEVFHAANNKLE-LVPEGLCRCVKLQKL 344 (1255)
T ss_pred cchhhhhhhHHHHhhccccc-cCchhhhhhHHHHHh
Confidence 66666666666666666665 556666665555443
No 455
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=99.11 E-value=1.6e-11 Score=114.73 Aligned_cols=120 Identities=29% Similarity=0.451 Sum_probs=105.7
Q ss_pred CccccCChhccCCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCCCCc
Q 011005 2 YKIGIIPPEIGNLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGSIPG 81 (496)
Q Consensus 2 n~~~~lp~~~~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~ 81 (496)
|+++-+|-.++.+++|..|+|++|-+. .+|..++.+..|+.||+|.|++. .+|..+-.+..|+++-.++|++....|.
T Consensus 422 n~isfv~~~l~~l~kLt~L~L~NN~Ln-~LP~e~~~lv~Lq~LnlS~NrFr-~lP~~~y~lq~lEtllas~nqi~~vd~~ 499 (565)
T KOG0472|consen 422 NKISFVPLELSQLQKLTFLDLSNNLLN-DLPEEMGSLVRLQTLNLSFNRFR-MLPECLYELQTLETLLASNNQIGSVDPS 499 (565)
T ss_pred CccccchHHHHhhhcceeeecccchhh-hcchhhhhhhhhheecccccccc-cchHHHhhHHHHHHHHhccccccccChH
Confidence 566777779999999999999999998 88999999999999999999999 8999888888899999999999966667
Q ss_pred cccCcccccccccccccCCCCCCCCCCCCCccccccccCCCCCC
Q 011005 82 EITKLSRLDYLNLSSNKLSGPVPFSNNDLSSMHTVVSLSPNNGL 125 (496)
Q Consensus 82 ~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~l~~~~~~~~n~~~ 125 (496)
.+.+|.+|..|||.+|.|. .+|..++++++|.++ .+++||.-
T Consensus 500 ~l~nm~nL~tLDL~nNdlq-~IPp~LgnmtnL~hL-eL~gNpfr 541 (565)
T KOG0472|consen 500 GLKNMRNLTTLDLQNNDLQ-QIPPILGNMTNLRHL-ELDGNPFR 541 (565)
T ss_pred HhhhhhhcceeccCCCchh-hCChhhccccceeEE-EecCCccC
Confidence 7999999999999999999 778899999999775 45666544
No 456
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=99.11 E-value=6.7e-12 Score=122.40 Aligned_cols=120 Identities=26% Similarity=0.281 Sum_probs=75.0
Q ss_pred CCccccCCh-hccCCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCCC
Q 011005 1 MYKIGIIPP-EIGNLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGSI 79 (496)
Q Consensus 1 ~n~~~~lp~-~~~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~ 79 (496)
+|++..+.+ .+.+|+.|+.|+||+|.|..+-++...-.++|++|+|++|+|+..-+.+|..|..|++|+|++|.++..-
T Consensus 278 ~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~ 357 (873)
T KOG4194|consen 278 TNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSIDHLA 357 (873)
T ss_pred cchhhhhhcccccccchhhhhccchhhhheeecchhhhcccceeEeccccccccCChhHHHHHHHhhhhcccccchHHHH
Confidence 355666655 5666666666666666666666666666666666666666666544556666666677777777666333
Q ss_pred CccccCcccccccccccccCCCCCC---CCCCCCCccccccccC
Q 011005 80 PGEITKLSRLDYLNLSSNKLSGPVP---FSNNDLSSMHTVVSLS 120 (496)
Q Consensus 80 ~~~~~~l~~L~~l~l~~n~l~~~~~---~~~~~l~~l~~~~~~~ 120 (496)
-..|..|++|+.|||++|.|+..+- ..|++|++|+.|....
T Consensus 358 e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~LrkL~l~g 401 (873)
T KOG4194|consen 358 EGAFVGLSSLHKLDLRSNELSWCIEDAAVAFNGLPSLRKLRLTG 401 (873)
T ss_pred hhHHHHhhhhhhhcCcCCeEEEEEecchhhhccchhhhheeecC
Confidence 4456666777777777777665443 3355666665554433
No 457
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.10 E-value=6.5e-11 Score=102.12 Aligned_cols=114 Identities=33% Similarity=0.428 Sum_probs=36.0
Q ss_pred cccCChhccCCCCCCEEeccCCccCCCCCccCC-CCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCCCCcc
Q 011005 4 IGIIPPEIGNLKNLIKLDVGSNSLIGPIPSALG-SLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGSIPGE 82 (496)
Q Consensus 4 ~~~lp~~~~~l~~L~~L~l~~n~i~~~~p~~~~-~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~ 82 (496)
|..+| .+.+..+++.|+|++|.|+. +. .++ .+.+|+.|+|++|+|+. + +.+..++.|++|++++|+|+ .+.+.
T Consensus 9 i~~~~-~~~n~~~~~~L~L~~n~I~~-Ie-~L~~~l~~L~~L~Ls~N~I~~-l-~~l~~L~~L~~L~L~~N~I~-~i~~~ 82 (175)
T PF14580_consen 9 IEQIA-QYNNPVKLRELNLRGNQIST-IE-NLGATLDKLEVLDLSNNQITK-L-EGLPGLPRLKTLDLSNNRIS-SISEG 82 (175)
T ss_dssp ------------------------------S--TT-TT--EEE-TTS--S----TT----TT--EEE--SS----S-CHH
T ss_pred ccccc-cccccccccccccccccccc-cc-chhhhhcCCCEEECCCCCCcc-c-cCccChhhhhhcccCCCCCC-ccccc
Confidence 33443 34455678999999999984 43 455 57889999999999984 4 46888899999999999998 45444
Q ss_pred c-cCcccccccccccccCCCCCC-CCCCCCCccccccccCCCCC
Q 011005 83 I-TKLSRLDYLNLSSNKLSGPVP-FSNNDLSSMHTVVSLSPNNG 124 (496)
Q Consensus 83 ~-~~l~~L~~l~l~~n~l~~~~~-~~~~~l~~l~~~~~~~~n~~ 124 (496)
+ ..+++|+.|++++|+|..... ..+..+++|.. +++.+||.
T Consensus 83 l~~~lp~L~~L~L~~N~I~~l~~l~~L~~l~~L~~-L~L~~NPv 125 (175)
T PF14580_consen 83 LDKNLPNLQELYLSNNKISDLNELEPLSSLPKLRV-LSLEGNPV 125 (175)
T ss_dssp HHHH-TT--EEE-TTS---SCCCCGGGGG-TT--E-EE-TT-GG
T ss_pred hHHhCCcCCEEECcCCcCCChHHhHHHHcCCCcce-eeccCCcc
Confidence 4 468899999999999975433 23445556643 45556654
No 458
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.09 E-value=6.8e-12 Score=116.94 Aligned_cols=126 Identities=25% Similarity=0.335 Sum_probs=101.4
Q ss_pred CCccccCCh-hccCCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccC-CcCCCCCchhhcCCcccCeecccccccCCC
Q 011005 1 MYKIGIIPP-EIGNLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSS-NKLSGKIPPEIASMKYLTQLDLSNNNIQGS 78 (496)
Q Consensus 1 ~n~~~~lp~-~~~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~-n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~ 78 (496)
.|+|+.||+ .|+.+++|+.||||+|+|+.+-|++|..+++|..|-+.+ |+|+....+.|.+|..|+.|.+.-|++.-.
T Consensus 76 qN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F~gL~slqrLllNan~i~Ci 155 (498)
T KOG4237|consen 76 QNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITDLPKGAFGGLSSLQRLLLNANHINCI 155 (498)
T ss_pred cCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhhhhhhHhhhHHHHHHHhcChhhhcch
Confidence 488888888 788888899999999998888888888888887776555 888855556788888888888888888867
Q ss_pred CCccccCcccccccccccccCCCCCCCCCCCCCccccccccCCCCCCCC
Q 011005 79 IPGEITKLSRLDYLNLSSNKLSGPVPFSNNDLSSMHTVVSLSPNNGLCG 127 (496)
Q Consensus 79 ~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~l~~~~~~~~n~~~c~ 127 (496)
....|..|++|..|.+..|.+......+|..+..++++.. ..|+..|.
T Consensus 156 r~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhl-A~np~icd 203 (498)
T KOG4237|consen 156 RQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHL-AQNPFICD 203 (498)
T ss_pred hHHHHHHhhhcchhcccchhhhhhccccccchhccchHhh-hcCccccc
Confidence 7778888888989999999888666668888888877653 45666665
No 459
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=99.07 E-value=2.2e-09 Score=94.29 Aligned_cols=127 Identities=24% Similarity=0.361 Sum_probs=83.0
Q ss_pred eEEEEEeCCCcEEEEEEcccch-------------------------hHHHHHHHHHHHHHHHhhccc--ccccccceee
Q 011005 220 SVYKAQLPNGKVFALKKLHTSE-------------------------ELAFIKSFKNEAQVLSQVLHR--NIVKLYGYCL 272 (496)
Q Consensus 220 ~Vy~~~~~~~~~vavK~~~~~~-------------------------~~~~~~~~~~e~~~l~~l~h~--niv~~~~~~~ 272 (496)
.||.|..++|..+|+|..+... .........+|++.|.++... ++.+++++.
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~- 79 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN- 79 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE-
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe-
Confidence 4899999999999999886421 011223467899999999755 455665442
Q ss_pred cCCeEEEEEEecC--CCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHH-HHhCCCCCeEEeCCCCCceEecCCCCeEE
Q 011005 273 HKKCMFLIYEYME--RGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAY-LHHDCSPSIIHRDISSNNILLNSKLEAFV 349 (496)
Q Consensus 273 ~~~~~~lV~e~~~--~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~-lh~~~~~~i~H~dlkp~Nil~~~~~~~kl 349 (496)
+ .++||||++ |..+..+.... ++......++.+++..+.. +| ..|++|||+++.||+++++ .+.+
T Consensus 80 -~--~~ivME~I~~~G~~~~~l~~~~-----~~~~~~~~~~~~il~~~~~~~~---~~givHGDLs~~NIlv~~~-~~~i 147 (188)
T PF01163_consen 80 -R--NVIVMEYIGEDGVPLPRLKDVD-----LSPEEPKELLEEILEEIIKMLH---KAGIVHGDLSEYNILVDDG-KVYI 147 (188)
T ss_dssp -T--TEEEEE--EETTEEGGCHHHCG-----GGGSTHHHHHHHHHHHHHHHHH---CTTEEESS-STTSEEEETT-CEEE
T ss_pred -C--CEEEEEecCCCccchhhHHhcc-----ccchhHHHHHHHHHHHHHHHHH---hcCceecCCChhhEEeecc-eEEE
Confidence 2 369999998 54454333321 1123345577788885555 57 7899999999999999988 8999
Q ss_pred cccccccccc
Q 011005 350 ADFGTARLLH 359 (496)
Q Consensus 350 ~Dfg~~~~~~ 359 (496)
+|||.+....
T Consensus 148 IDf~qav~~~ 157 (188)
T PF01163_consen 148 IDFGQAVDSS 157 (188)
T ss_dssp --GTTEEETT
T ss_pred EecCcceecC
Confidence 9999987653
No 460
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=99.07 E-value=5.6e-11 Score=84.37 Aligned_cols=61 Identities=41% Similarity=0.581 Sum_probs=41.2
Q ss_pred CCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeeccccccc
Q 011005 15 KNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNI 75 (496)
Q Consensus 15 ~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l 75 (496)
++|+.|+|++|+|+...++.|..+++|++|+|++|+|+...|..|.++++|++|++++|+|
T Consensus 1 p~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred CcCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 4567777777777755556667777777777777777655555667777777777777654
No 461
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.06 E-value=1.7e-11 Score=120.51 Aligned_cols=113 Identities=29% Similarity=0.465 Sum_probs=102.3
Q ss_pred cccCChhccCCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCCCCccc
Q 011005 4 IGIIPPEIGNLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGSIPGEI 83 (496)
Q Consensus 4 ~~~lp~~~~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~ 83 (496)
+..+|.++..|.+|..+|||.|++. .+|+.+-++++|+.|+||+|+|+ .+.-......+|++|+||.|+++ .+|..+
T Consensus 211 l~N~Ptsld~l~NL~dvDlS~N~Lp-~vPecly~l~~LrrLNLS~N~it-eL~~~~~~W~~lEtLNlSrNQLt-~LP~av 287 (1255)
T KOG0444|consen 211 LDNIPTSLDDLHNLRDVDLSENNLP-IVPECLYKLRNLRRLNLSGNKIT-ELNMTEGEWENLETLNLSRNQLT-VLPDAV 287 (1255)
T ss_pred hhcCCCchhhhhhhhhccccccCCC-cchHHHhhhhhhheeccCcCcee-eeeccHHHHhhhhhhccccchhc-cchHHH
Confidence 3458999999999999999999998 89999999999999999999999 77778888899999999999999 899999
Q ss_pred cCcccccccccccccCC-CCCCCCCCCCCcccccccc
Q 011005 84 TKLSRLDYLNLSSNKLS-GPVPFSNNDLSSMHTVVSL 119 (496)
Q Consensus 84 ~~l~~L~~l~l~~n~l~-~~~~~~~~~l~~l~~~~~~ 119 (496)
+.|+.|+.|.+.+|+++ .-+|..++.|..|..+...
T Consensus 288 cKL~kL~kLy~n~NkL~FeGiPSGIGKL~~Levf~aa 324 (1255)
T KOG0444|consen 288 CKLTKLTKLYANNNKLTFEGIPSGIGKLIQLEVFHAA 324 (1255)
T ss_pred hhhHHHHHHHhccCcccccCCccchhhhhhhHHHHhh
Confidence 99999999999999997 3478899999999655443
No 462
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=99.06 E-value=3.9e-11 Score=117.19 Aligned_cols=115 Identities=23% Similarity=0.241 Sum_probs=72.2
Q ss_pred CccccCCh-hccCCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCCCC
Q 011005 2 YKIGIIPP-EIGNLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGSIP 80 (496)
Q Consensus 2 n~~~~lp~-~~~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~ 80 (496)
|+|+.+|. .|.+|++|+.|+|..|+|.-.---.|.+|++|+.|.|..|+|+..-...|..|.++++|+|+.|+++..-.
T Consensus 207 NrittLp~r~Fk~L~~L~~LdLnrN~irive~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~ 286 (873)
T KOG4194|consen 207 NRITTLPQRSFKRLPKLESLDLNRNRIRIVEGLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAVNE 286 (873)
T ss_pred CcccccCHHHhhhcchhhhhhccccceeeehhhhhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhhhhhc
Confidence 56666666 55556666666666666653323445666666666666666664444556666677777777777765455
Q ss_pred ccccCcccccccccccccCCCCCCCCCCCCCccccc
Q 011005 81 GEITKLSRLDYLNLSSNKLSGPVPFSNNDLSSMHTV 116 (496)
Q Consensus 81 ~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~l~~~ 116 (496)
+++.+|..|+.|+|+.|.|....++++...++|+.|
T Consensus 287 g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~L 322 (873)
T KOG4194|consen 287 GWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKEL 322 (873)
T ss_pred ccccccchhhhhccchhhhheeecchhhhcccceeE
Confidence 566667777777777777766666666666666544
No 463
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=99.04 E-value=5e-09 Score=97.65 Aligned_cols=140 Identities=19% Similarity=0.155 Sum_probs=100.4
Q ss_pred eeecCCeeEEEEEeCCCcEEEEEEcccchhHHHHH----------HHHHHHHHHHhhccccc--ccccceeec-----CC
Q 011005 213 IGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIK----------SFKNEAQVLSQVLHRNI--VKLYGYCLH-----KK 275 (496)
Q Consensus 213 lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~----------~~~~e~~~l~~l~h~ni--v~~~~~~~~-----~~ 275 (496)
+-......|.+..+ +|+.|.||......-....+ .+.+|...+.++...+| +.++++... ..
T Consensus 30 v~~~~~rrvvr~~~-~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~ 108 (268)
T PRK15123 30 FRELEGRRTLRFEL-AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPATR 108 (268)
T ss_pred EecCCCceEEEEEE-CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccc
Confidence 44444455777776 67889999775433111112 37799999999964444 455556543 23
Q ss_pred eEEEEEEecCCC-ChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecC-------CCCe
Q 011005 276 CMFLIYEYMERG-SLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNS-------KLEA 347 (496)
Q Consensus 276 ~~~lV~e~~~~g-~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~-------~~~~ 347 (496)
.-++|+|++++. +|.+++..... ...+...+..++.+++..+.-|| ..||+|+|++++|||++. +..+
T Consensus 109 ~s~LVte~l~~~~sL~~~~~~~~~-~~~~~~~~~~ll~~la~~i~~LH---~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~ 184 (268)
T PRK15123 109 TSFIITEDLAPTISLEDYCADWAT-NPPDPRLKRMLIKRVATMVRDMH---AAGINHRDCYICHFLLHLPFPGREEDLKL 184 (268)
T ss_pred eeEEEEeeCCCCccHHHHHHhhcc-cCCCHHHHHHHHHHHHHHHHHHH---HCcCccCCCChhhEEEeccccCCCCCceE
Confidence 468999999886 78888753211 23456677789999999999999 889999999999999975 4678
Q ss_pred EEcccccccc
Q 011005 348 FVADFGTARL 357 (496)
Q Consensus 348 kl~Dfg~~~~ 357 (496)
.++||+.+..
T Consensus 185 ~LIDl~r~~~ 194 (268)
T PRK15123 185 SVIDLHRAQI 194 (268)
T ss_pred EEEECCcccc
Confidence 9999998853
No 464
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=99.03 E-value=2.6e-09 Score=96.19 Aligned_cols=137 Identities=22% Similarity=0.251 Sum_probs=99.2
Q ss_pred CCCcceeeecCCeeEEEEEeCCCcEEEEEEcccch----------h-----------HHHHHHHHHHHHHHHhhccc--c
Q 011005 207 FDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSE----------E-----------LAFIKSFKNEAQVLSQVLHR--N 263 (496)
Q Consensus 207 ~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~----------~-----------~~~~~~~~~e~~~l~~l~h~--n 263 (496)
..+...||-|--+.||.|..++|.++|||.=+... + ........+|.++|.++... .
T Consensus 93 e~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~ 172 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVK 172 (304)
T ss_pred HhhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCC
Confidence 34567899999999999999999999999543211 0 11223467899999999644 6
Q ss_pred cccccceeecCCeEEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecC
Q 011005 264 IVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNS 343 (496)
Q Consensus 264 iv~~~~~~~~~~~~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~ 343 (496)
+.+.+++ +...+|||+.+|-.|...-. +....-.++..|+.-+.-+- ..|++|+|+++-||++++
T Consensus 173 VP~P~~~----nRHaVvMe~ieG~eL~~~r~--------~~en~~~il~~il~~~~~~~---~~GiVHGDlSefNIlV~~ 237 (304)
T COG0478 173 VPKPIAW----NRHAVVMEYIEGVELYRLRL--------DVENPDEILDKILEEVRKAY---RRGIVHGDLSEFNILVTE 237 (304)
T ss_pred CCCcccc----ccceeeeehcccceeecccC--------cccCHHHHHHHHHHHHHHHH---HcCccccCCchheEEEec
Confidence 7776664 35679999999866653321 12333345555555555555 468999999999999999
Q ss_pred CCCeEEccccccccc
Q 011005 344 KLEAFVADFGTARLL 358 (496)
Q Consensus 344 ~~~~kl~Dfg~~~~~ 358 (496)
+|.+.++||-.+...
T Consensus 238 dg~~~vIDwPQ~v~~ 252 (304)
T COG0478 238 DGDIVVIDWPQAVPI 252 (304)
T ss_pred CCCEEEEeCcccccC
Confidence 999999999877654
No 465
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.02 E-value=1.2e-10 Score=100.58 Aligned_cols=98 Identities=31% Similarity=0.444 Sum_probs=44.9
Q ss_pred CCccccCChhcc-CCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCchhh-cCCcccCeecccccccCCC
Q 011005 1 MYKIGIIPPEIG-NLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEI-ASMKYLTQLDLSNNNIQGS 78 (496)
Q Consensus 1 ~n~~~~lp~~~~-~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~-~~l~~L~~l~l~~N~l~~~ 78 (496)
+|+|..+. .++ .|.+|+.|+|++|+|+. ++ .+..+++|+.|+|++|+|+ .+++.+ ..+++|+.|+|++|+|...
T Consensus 28 ~n~I~~Ie-~L~~~l~~L~~L~Ls~N~I~~-l~-~l~~L~~L~~L~L~~N~I~-~i~~~l~~~lp~L~~L~L~~N~I~~l 103 (175)
T PF14580_consen 28 GNQISTIE-NLGATLDKLEVLDLSNNQITK-LE-GLPGLPRLKTLDLSNNRIS-SISEGLDKNLPNLQELYLSNNKISDL 103 (175)
T ss_dssp ---------S--TT-TT--EEE-TTS--S---T-T----TT--EEE--SS----S-CHHHHHH-TT--EEE-TTS---SC
T ss_pred cccccccc-chhhhhcCCCEEECCCCCCcc-cc-CccChhhhhhcccCCCCCC-ccccchHHhCCcCCEEECcCCcCCCh
Confidence 47777774 566 58999999999999995 43 5889999999999999999 565555 4699999999999999742
Q ss_pred C-CccccCcccccccccccccCCCC
Q 011005 79 I-PGEITKLSRLDYLNLSSNKLSGP 102 (496)
Q Consensus 79 ~-~~~~~~l~~L~~l~l~~n~l~~~ 102 (496)
- -..++.+++|+.|++.+|+++..
T Consensus 104 ~~l~~L~~l~~L~~L~L~~NPv~~~ 128 (175)
T PF14580_consen 104 NELEPLSSLPKLRVLSLEGNPVCEK 128 (175)
T ss_dssp CCCGGGGG-TT--EEE-TT-GGGGS
T ss_pred HHhHHHHcCCCcceeeccCCcccch
Confidence 2 24678899999999999999844
No 466
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=99.00 E-value=1.2e-10 Score=82.68 Aligned_cols=61 Identities=44% Similarity=0.660 Sum_probs=55.7
Q ss_pred CCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCCCCccccCcccccccccccccC
Q 011005 39 TNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGSIPGEITKLSRLDYLNLSSNKL 99 (496)
Q Consensus 39 ~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l 99 (496)
|+|++|+|++|+|+...+..|..+++|++|+|++|+++...|..|.++++|+.|++++|+|
T Consensus 1 p~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred CcCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 5799999999999966557899999999999999999977778999999999999999986
No 467
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=98.93 E-value=3.3e-08 Score=96.20 Aligned_cols=170 Identities=19% Similarity=0.316 Sum_probs=127.0
Q ss_pred CCeeEEEEEe-CCCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeec----CCeEEEEEEecCC-CChh
Q 011005 217 GYGSVYKAQL-PNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLH----KKCMFLIYEYMER-GSLF 290 (496)
Q Consensus 217 ~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~----~~~~~lV~e~~~~-g~L~ 290 (496)
...+.||+.. -+|..|++|+++...... ...-..-+++.+++.|.|+|++.+++.. ...+++|++|.++ ++|.
T Consensus 288 ~~~Ttyk~~s~~DG~~YvLkRlhg~r~~~-~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~ 366 (655)
T KOG3741|consen 288 FSITTYKATSNVDGNAYVLKRLHGDRDQS-TNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLY 366 (655)
T ss_pred ccceeEeeeeccCCceeeeeeeccccccC-cccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHH
Confidence 3468899954 489999999995433211 1122345788999999999999998873 3468999999876 5776
Q ss_pred hhhhCCC------------CCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccc
Q 011005 291 CNLHNNE------------DAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLL 358 (496)
Q Consensus 291 ~~l~~~~------------~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 358 (496)
++-.... .+...++...|.++.|++.||.++| +.|+.-+-|.|.+|+++.+.+++|...|.....
T Consensus 367 d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIH---ssGLAck~L~~~kIlv~G~~RIriS~C~i~Dvl 443 (655)
T KOG3741|consen 367 DLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIH---SSGLACKTLDLKKILVTGKMRIRISGCGIMDVL 443 (655)
T ss_pred HHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHH---hcCceeecccHhHeEeeCcceEEEecccceeee
Confidence 6543221 2234678899999999999999999 789999999999999999999999888877665
Q ss_pred cCCCCCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCC
Q 011005 359 HADSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 407 (496)
Q Consensus 359 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p 407 (496)
..+.. |-+.+ -.+-|.=.||.++..|.||..-
T Consensus 444 ~~d~~--------------~~le~---~Qq~D~~~lG~ll~aLAt~~~n 475 (655)
T KOG3741|consen 444 QEDPT--------------EPLES---QQQNDLRDLGLLLLALATGTEN 475 (655)
T ss_pred cCCCC--------------cchhH---HhhhhHHHHHHHHHHHhhcccc
Confidence 44431 00111 2367888999999999999543
No 468
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=98.92 E-value=1.8e-10 Score=112.42 Aligned_cols=116 Identities=37% Similarity=0.525 Sum_probs=88.0
Q ss_pred CccccCChhccCCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCCCCc
Q 011005 2 YKIGIIPPEIGNLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGSIPG 81 (496)
Q Consensus 2 n~~~~lp~~~~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~ 81 (496)
|.+..+|+.+.+|..|++|||+.|+++ .+|..++.|+ |+.|-+++|+++ .+|+.++.++.|.+||.++|.+. .+|.
T Consensus 108 n~~r~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkvli~sNNkl~-~lp~~ig~~~tl~~ld~s~nei~-slps 183 (722)
T KOG0532|consen 108 NCIRTIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKVLIVSNNKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPS 183 (722)
T ss_pred ccceecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-ceeEEEecCccc-cCCcccccchhHHHhhhhhhhhh-hchH
Confidence 778888888889999999999999887 7788888887 888888888888 67777777777777777777776 5555
Q ss_pred cccCccc----------------------ccccccccccCCCCCCCCCCCCCccccccccCCCC
Q 011005 82 EITKLSR----------------------LDYLNLSSNKLSGPVPFSNNDLSSMHTVVSLSPNN 123 (496)
Q Consensus 82 ~~~~l~~----------------------L~~l~l~~n~l~~~~~~~~~~l~~l~~~~~~~~n~ 123 (496)
.++++.+ |..||++.|+++ .+|..|..|+.|+.+ .+++||
T Consensus 184 ql~~l~slr~l~vrRn~l~~lp~El~~LpLi~lDfScNkis-~iPv~fr~m~~Lq~l-~LenNP 245 (722)
T KOG0532|consen 184 QLGYLTSLRDLNVRRNHLEDLPEELCSLPLIRLDFSCNKIS-YLPVDFRKMRHLQVL-QLENNP 245 (722)
T ss_pred HhhhHHHHHHHHHhhhhhhhCCHHHhCCceeeeecccCcee-ecchhhhhhhhheee-eeccCC
Confidence 5555544 455666777777 678888888888654 456665
No 469
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.87 E-value=7e-10 Score=111.45 Aligned_cols=155 Identities=20% Similarity=0.205 Sum_probs=104.5
Q ss_pred HHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCC----Cccc-----ccccccccccccccc
Q 011005 312 KAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSS----NRTL-----LAGTYGYIAPELAYT 382 (496)
Q Consensus 312 ~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~----~~~~-----~~gt~~y~aPE~~~~ 382 (496)
.+++.|+.|+|. ..++||++|.|++|.++..+..||+.|+.+........ .++. ......|.|||++.+
T Consensus 106 ~~v~dgl~flh~--sAk~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~ 183 (700)
T KOG2137|consen 106 GNVADGLAFLHR--SAKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLG 183 (700)
T ss_pred hcccchhhhhcc--CcceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhcc
Confidence 455699999997 78999999999999999999999999999876544211 1111 123457999999999
Q ss_pred CCcCcccchhhHHHHHHHHHhC-CCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHHHHHHHHHHHHHhcccCCCCC
Q 011005 383 MVMTEKCDVYSFGVVTLEVLMG-KHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVIRDILLISTVSFACLQSNPKS 461 (496)
Q Consensus 383 ~~~~~~~DvwslG~il~el~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~ 461 (496)
...+.++|+||+|+++|.+..| +.-+........ .......+..-.... ....+.++.+=+.+++..++..
T Consensus 184 ~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~-----~~~~~~~~~~~~~~~---s~~~p~el~~~l~k~l~~~~~~ 255 (700)
T KOG2137|consen 184 TTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLS-----YSFSRNLLNAGAFGY---SNNLPSELRESLKKLLNGDSAV 255 (700)
T ss_pred ccccccccceeeeeEEEEEecCCcchhhccCCcch-----hhhhhcccccccccc---cccCcHHHHHHHHHHhcCCccc
Confidence 8889999999999999999954 444432211100 000000000000000 0112234556666899999999
Q ss_pred CCCHHHHHHHHHHhc
Q 011005 462 RPTMQSVSQEFLITR 476 (496)
Q Consensus 462 Rps~~evl~~~~~~~ 476 (496)
||++.++...+++..
T Consensus 256 rp~~~~l~~~~ff~D 270 (700)
T KOG2137|consen 256 RPTLDLLLSIPFFSD 270 (700)
T ss_pred CcchhhhhcccccCC
Confidence 999998888776643
No 470
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=98.85 E-value=4e-10 Score=105.33 Aligned_cols=122 Identities=24% Similarity=0.316 Sum_probs=102.5
Q ss_pred cccCChhccCCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccc-cccCCCCCcc
Q 011005 4 IGIIPPEIGNLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSN-NNIQGSIPGE 82 (496)
Q Consensus 4 ~~~lp~~~~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~-N~l~~~~~~~ 82 (496)
++.+|.++. +....|+|..|+|+.+.|.+|..+++|+.||||+|+|+-+-|++|..+.+|.+|-+.+ |+|+....+.
T Consensus 58 L~eVP~~LP--~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~ 135 (498)
T KOG4237|consen 58 LTEVPANLP--PETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITDLPKGA 135 (498)
T ss_pred cccCcccCC--CcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhhhhhhH
Confidence 456675543 2578899999999988889999999999999999999988999999999998876555 9999655568
Q ss_pred ccCcccccccccccccCCCCCCCCCCCCCccccccccCCCC-CCCC
Q 011005 83 ITKLSRLDYLNLSSNKLSGPVPFSNNDLSSMHTVVSLSPNN-GLCG 127 (496)
Q Consensus 83 ~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~l~~~~~~~~n~-~~c~ 127 (496)
|.+|..|+-|.+.-|++.-.....|..++++..|..+++.. ..|.
T Consensus 136 F~gL~slqrLllNan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~ 181 (498)
T KOG4237|consen 136 FGGLSSLQRLLLNANHINCIRQDALRDLPSLSLLSLYDNKIQSICK 181 (498)
T ss_pred hhhHHHHHHHhcChhhhcchhHHHHHHhhhcchhcccchhhhhhcc
Confidence 99999999999999999988889999999997666555543 5555
No 471
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=98.85 E-value=2.6e-10 Score=111.23 Aligned_cols=110 Identities=35% Similarity=0.567 Sum_probs=95.6
Q ss_pred CccccCChhccCCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCCCCc
Q 011005 2 YKIGIIPPEIGNLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGSIPG 81 (496)
Q Consensus 2 n~~~~lp~~~~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~ 81 (496)
|+++.+|++++.++.|..||.+.|+|. .+|..++++.+|+.|.+..|++. .+|+.+..| .|..||+|+|+++ .+|-
T Consensus 153 Nkl~~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~-~lp~El~~L-pLi~lDfScNkis-~iPv 228 (722)
T KOG0532|consen 153 NKLTSLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE-DLPEELCSL-PLIRLDFSCNKIS-YLPV 228 (722)
T ss_pred CccccCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh-hCCHHHhCC-ceeeeecccCcee-ecch
Confidence 788999999999999999999999998 77888999999999999999998 688888854 5999999999999 8999
Q ss_pred cccCcccccccccccccCCCCCCCCCCCCCccccc
Q 011005 82 EITKLSRLDYLNLSSNKLSGPVPFSNNDLSSMHTV 116 (496)
Q Consensus 82 ~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~l~~~ 116 (496)
.|.+|+.|++|-|.+|+|+ .+|..++.....|-+
T Consensus 229 ~fr~m~~Lq~l~LenNPLq-SPPAqIC~kGkVHIF 262 (722)
T KOG0532|consen 229 DFRKMRHLQVLQLENNPLQ-SPPAQICEKGKVHIF 262 (722)
T ss_pred hhhhhhhheeeeeccCCCC-CChHHHHhccceeee
Confidence 9999999999999999999 666666655555433
No 472
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=98.78 E-value=4.7e-10 Score=115.37 Aligned_cols=87 Identities=37% Similarity=0.515 Sum_probs=49.5
Q ss_pred ccCCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCCCCccccCccccc
Q 011005 11 IGNLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGSIPGEITKLSRLD 90 (496)
Q Consensus 11 ~~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~l~~L~ 90 (496)
+.++++|+.|+|++|+|.......+.++..|+.|+||+|+|+ .+|+.+.++..|++|...+|++. .+| .+..++.|+
T Consensus 379 l~~~~hLKVLhLsyNrL~~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ahsN~l~-~fP-e~~~l~qL~ 455 (1081)
T KOG0618|consen 379 LVNFKHLKVLHLSYNRLNSFPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHTLRAHSNQLL-SFP-ELAQLPQLK 455 (1081)
T ss_pred hccccceeeeeecccccccCCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHHHhhcCCcee-ech-hhhhcCcce
Confidence 445566666666666665222234556666666666666666 55555555555555555555555 455 455555555
Q ss_pred ccccccccCC
Q 011005 91 YLNLSSNKLS 100 (496)
Q Consensus 91 ~l~l~~n~l~ 100 (496)
.+|++.|+|+
T Consensus 456 ~lDlS~N~L~ 465 (1081)
T KOG0618|consen 456 VLDLSCNNLS 465 (1081)
T ss_pred EEecccchhh
Confidence 5555555554
No 473
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.75 E-value=7.4e-10 Score=88.50 Aligned_cols=113 Identities=23% Similarity=0.331 Sum_probs=90.8
Q ss_pred hccCCCCCCEEeccCCccCCCCCccCC-CCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCCCCccccCccc
Q 011005 10 EIGNLKNLIKLDVGSNSLIGPIPSALG-SLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGSIPGEITKLSR 88 (496)
Q Consensus 10 ~~~~l~~L~~L~l~~n~i~~~~p~~~~-~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~l~~ 88 (496)
.+.....|+.++|++|.+. .+|..|. .++.++.|+|++|+|+ .+|..+..|+.|+.|+++.|.+. ..|.-+..|.+
T Consensus 48 ~l~~~~el~~i~ls~N~fk-~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~lNl~~N~l~-~~p~vi~~L~~ 124 (177)
T KOG4579|consen 48 MLSKGYELTKISLSDNGFK-KFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSLNLRFNPLN-AEPRVIAPLIK 124 (177)
T ss_pred HHhCCceEEEEecccchhh-hCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhcccccCccc-cchHHHHHHHh
Confidence 3445566888899999998 5666555 5568999999999999 78999999999999999999999 78888888999
Q ss_pred ccccccccccCCCCCCCCCCCCCccccccccCCCCCCCC
Q 011005 89 LDYLNLSSNKLSGPVPFSNNDLSSMHTVVSLSPNNGLCG 127 (496)
Q Consensus 89 L~~l~l~~n~l~~~~~~~~~~l~~l~~~~~~~~n~~~c~ 127 (496)
|..|+..+|.+. .+|.. .-.+++..++.+.++++--+
T Consensus 125 l~~Lds~~na~~-eid~d-l~~s~~~al~~lgnepl~~~ 161 (177)
T KOG4579|consen 125 LDMLDSPENARA-EIDVD-LFYSSLPALIKLGNEPLGDE 161 (177)
T ss_pred HHHhcCCCCccc-cCcHH-HhccccHHHHHhcCCccccc
Confidence 999999999998 55654 44556666777766665433
No 474
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=98.74 E-value=1.5e-09 Score=111.69 Aligned_cols=111 Identities=29% Similarity=0.438 Sum_probs=93.0
Q ss_pred CCccccCCh-hccCCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCC-
Q 011005 1 MYKIGIIPP-EIGNLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGS- 78 (496)
Q Consensus 1 ~n~~~~lp~-~~~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~- 78 (496)
+|++..+|. .+.+|+.|+.|+||+|.++ .+|+.+..++.|++|...+|+|. .+| .+..+++|+.+|+|.|+++..
T Consensus 392 yNrL~~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ahsN~l~-~fP-e~~~l~qL~~lDlS~N~L~~~~ 468 (1081)
T KOG0618|consen 392 YNRLNSFPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHTLRAHSNQLL-SFP-ELAQLPQLKVLDLSCNNLSEVT 468 (1081)
T ss_pred ccccccCCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHHHhhcCCcee-ech-hhhhcCcceEEecccchhhhhh
Confidence 589999999 7889999999999999998 88999999999999999999999 788 899999999999999999743
Q ss_pred CCccccCcccccccccccccCCCCCCCCCCCCCcccc
Q 011005 79 IPGEITKLSRLDYLNLSSNKLSGPVPFSNNDLSSMHT 115 (496)
Q Consensus 79 ~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~l~~ 115 (496)
+|..... ++|++||++||.-.......|..+.+++.
T Consensus 469 l~~~~p~-p~LkyLdlSGN~~l~~d~~~l~~l~~l~~ 504 (1081)
T KOG0618|consen 469 LPEALPS-PNLKYLDLSGNTRLVFDHKTLKVLKSLSQ 504 (1081)
T ss_pred hhhhCCC-cccceeeccCCcccccchhhhHHhhhhhh
Confidence 3444333 89999999999976555666666666643
No 475
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.69 E-value=1.2e-07 Score=85.60 Aligned_cols=106 Identities=25% Similarity=0.336 Sum_probs=84.0
Q ss_pred HHHHHHHHHHHhhccc--ccccccceeecCC----eEEEEEEecCCC-ChhhhhhCCCCCccCCHHHHHHHHHHHHHHHH
Q 011005 247 KSFKNEAQVLSQVLHR--NIVKLYGYCLHKK----CMFLIYEYMERG-SLFCNLHNNEDAVELDWAKRVNIVKAMAHALA 319 (496)
Q Consensus 247 ~~~~~e~~~l~~l~h~--niv~~~~~~~~~~----~~~lV~e~~~~g-~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~ 319 (496)
....+|...+.++... .+++.+++..... ..++|+|++++. +|.+++..... .+......++.+++..+.
T Consensus 56 ~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~---~~~~~~~~ll~~l~~~i~ 132 (206)
T PF06293_consen 56 SRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQ---LDPSQRRELLRALARLIA 132 (206)
T ss_pred hHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcc---cchhhHHHHHHHHHHHHH
Confidence 3567888888888643 3456667666532 458999999884 78888876332 455667789999999999
Q ss_pred HHHhCCCCCeEEeCCCCCceEecCCC---CeEEccccccccc
Q 011005 320 YLHHDCSPSIIHRDISSNNILLNSKL---EAFVADFGTARLL 358 (496)
Q Consensus 320 ~lh~~~~~~i~H~dlkp~Nil~~~~~---~~kl~Dfg~~~~~ 358 (496)
-|| ..||+|+|+++.|||++.+. .+.++||+-++..
T Consensus 133 ~lH---~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~ 171 (206)
T PF06293_consen 133 KLH---DAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFR 171 (206)
T ss_pred HHH---HCcCCCCCCCcccEEEeCCCCceeEEEEcchhceeC
Confidence 999 88999999999999999887 7999999988654
No 476
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.64 E-value=1.6e-07 Score=94.97 Aligned_cols=143 Identities=17% Similarity=0.145 Sum_probs=91.0
Q ss_pred ceeeecCCeeEEEEEeCCCcEEEEEEcccchhHH---------------------------------HH------HHHHH
Q 011005 211 YCIGTGGYGSVYKAQLPNGKVFALKKLHTSEELA---------------------------------FI------KSFKN 251 (496)
Q Consensus 211 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~---------------------------------~~------~~~~~ 251 (496)
..|+.++-|.||+|.+++|+.||||+.+..-... .. -.+.+
T Consensus 131 ~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~~ 210 (517)
T COG0661 131 EPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYRR 210 (517)
T ss_pred CchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHHH
Confidence 5688999999999999999999999987542111 00 11234
Q ss_pred HHHHHHhhc-----ccccccccceeecCCeEEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCC
Q 011005 252 EAQVLSQVL-----HRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCS 326 (496)
Q Consensus 252 e~~~l~~l~-----h~niv~~~~~~~~~~~~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~ 326 (496)
|..-+.+++ .+++.-..-|.+......|+|||++|-.+.+...-... ..+.........++.----+ .
T Consensus 211 EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~~--g~d~k~ia~~~~~~f~~q~~-----~ 283 (517)
T COG0661 211 EAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKSA--GIDRKELAELLVRAFLRQLL-----R 283 (517)
T ss_pred HHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHhc--CCCHHHHHHHHHHHHHHHHH-----h
Confidence 444444442 22222111222223456799999999888877432221 34433333222222222222 3
Q ss_pred CCeEEeCCCCCceEecCCCCeEEccccccccccC
Q 011005 327 PSIIHRDISSNNILLNSKLEAFVADFGTARLLHA 360 (496)
Q Consensus 327 ~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 360 (496)
.|+.|.|..|.||+++.++.+.+.|||+...+..
T Consensus 284 dgffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~~ 317 (517)
T COG0661 284 DGFFHADPHPGNILVRSDGRIVLLDFGIVGRLDP 317 (517)
T ss_pred cCccccCCCccceEEecCCcEEEEcCcceecCCH
Confidence 3899999999999999999999999999977643
No 477
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=98.63 E-value=5e-08 Score=102.95 Aligned_cols=35 Identities=37% Similarity=0.267 Sum_probs=18.7
Q ss_pred cccccccccccCCCCCCCCCCCCCccccccccCCCCC
Q 011005 88 RLDYLNLSSNKLSGPVPFSNNDLSSMHTVVSLSPNNG 124 (496)
Q Consensus 88 ~L~~l~l~~n~l~~~~~~~~~~l~~l~~~~~~~~n~~ 124 (496)
+|+.|++++|+|+ .+|.++.++++|.. +.+++|+.
T Consensus 423 ~L~~L~Ls~NqLt-~LP~sl~~L~~L~~-LdLs~N~L 457 (788)
T PRK15387 423 GLLSLSVYRNQLT-RLPESLIHLSSETT-VNLEGNPL 457 (788)
T ss_pred hhhhhhhccCccc-ccChHHhhccCCCe-EECCCCCC
Confidence 4455555555555 45555666666643 34555543
No 478
>PRK09902 hypothetical protein; Provisional
Probab=98.63 E-value=6.5e-07 Score=79.11 Aligned_cols=139 Identities=17% Similarity=0.109 Sum_probs=101.2
Q ss_pred eeecCCeeEEEEEeCCCcEEEEEEcccch--h---HHHHHHHHHHHHHHHhhcccc--cccccceeec-----CCeEEEE
Q 011005 213 IGTGGYGSVYKAQLPNGKVFALKKLHTSE--E---LAFIKSFKNEAQVLSQVLHRN--IVKLYGYCLH-----KKCMFLI 280 (496)
Q Consensus 213 lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~---~~~~~~~~~e~~~l~~l~h~n--iv~~~~~~~~-----~~~~~lV 280 (496)
-|+||-+.|++-.+. |+.+-+|.-...- + +-....|.+|...++++...+ +.++. ++.. ...-+||
T Consensus 26 ~~rgG~SgV~r~~~~-g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~LV 103 (216)
T PRK09902 26 YRRNGMSGVQCVERN-GKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRALLV 103 (216)
T ss_pred cCCCCcceEEEEEeC-CcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEEEE
Confidence 467899999998874 4468888764211 0 113367899999999996433 44444 3321 1246799
Q ss_pred EEecCC-CChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCC--eEEcccccccc
Q 011005 281 YEYMER-GSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLE--AFVADFGTARL 357 (496)
Q Consensus 281 ~e~~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~--~kl~Dfg~~~~ 357 (496)
+|-+.| -+|.+++..... ...+...+..+..+++.++.-|| ..|+.|+|+.+.||+++.++. ++++||.-++.
T Consensus 104 Te~L~g~~~L~~~l~~~~~-~~~~~~~k~~il~~va~~ia~LH---~~Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r~ 179 (216)
T PRK09902 104 TEDMAGFISIADWYAQHAV-SPYSDEVRQAMLKAVALAFKKMH---SVNRQHGCCYVRHIYVKTEGKAEAGFLDLEKSRR 179 (216)
T ss_pred EEeCCCCccHHHHHhcCCc-CCcchHHHHHHHHHHHHHHHHHH---HCCCcCCCCCHhheeecCCCCeeEEEEEhhccch
Confidence 998765 577777755322 24577777899999999999999 889999999999999986666 99999987754
No 479
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=98.63 E-value=1.5e-06 Score=77.97 Aligned_cols=155 Identities=21% Similarity=0.259 Sum_probs=104.7
Q ss_pred cccHHHHHHHHhCCCCcce---eeecCCeeEEEEEeCCCcEEEEEEcccchhHH-----------------------HHH
Q 011005 194 RIVYEDLIEATEDFDIRYC---IGTGGYGSVYKAQLPNGKVFALKKLHTSEELA-----------------------FIK 247 (496)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~---lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~-----------------------~~~ 247 (496)
..+.+.+....++..+... |++|--+.||+|...++..+|||+++.....- ...
T Consensus 34 ~~t~~~l~~L~~rg~i~~~~g~istGKEA~Vy~a~~~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~ 113 (268)
T COG1718 34 KRTLETLRRLLSRGVITELVGCISTGKEANVYLAETGDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFA 113 (268)
T ss_pred hHHHHHHHHHhcCCceeeeEeeecCCcceEEEeeccCCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHH
Confidence 4566777777787777665 55677789999988889999999997532110 011
Q ss_pred HHHHHHHHHHhhc--ccccccccceeecCCeEEEEEEecCCCCh-hhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhC
Q 011005 248 SFKNEAQVLSQVL--HRNIVKLYGYCLHKKCMFLIYEYMERGSL-FCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHD 324 (496)
Q Consensus 248 ~~~~e~~~l~~l~--h~niv~~~~~~~~~~~~~lV~e~~~~g~L-~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~ 324 (496)
-..+|+.-|+++. +-.+.+.+++. ...+||||+..... .=.|.. ..+...+...+..++++.+.-|-.
T Consensus 114 W~~kEf~NL~R~~eAGVrvP~Pi~~~----~nVLvMEfIg~~g~pAP~LkD----v~~e~~e~~~~~~~~v~~~~~l~~- 184 (268)
T COG1718 114 WARKEFRNLKRAYEAGVRVPEPIAFR----NNVLVMEFIGDDGLPAPRLKD----VPLELEEAEGLYEDVVEYMRRLYK- 184 (268)
T ss_pred HHHHHHHHHHHHHHcCCCCCCceeec----CCeEEEEeccCCCCCCCCccc----CCcCchhHHHHHHHHHHHHHHHHH-
Confidence 1245666666664 33334444433 24699999855311 111111 122333567788888888888873
Q ss_pred CCCCeEEeCCCCCceEecCCCCeEEcccccccccc
Q 011005 325 CSPSIIHRDISSNNILLNSKLEAFVADFGTARLLH 359 (496)
Q Consensus 325 ~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 359 (496)
..++||+||+.-|||+. ++.+.|+|||.|....
T Consensus 185 -~a~LVHgDLSEyNiL~~-~~~p~iID~~QaV~~~ 217 (268)
T COG1718 185 -EAGLVHGDLSEYNILVH-DGEPYIIDVSQAVTID 217 (268)
T ss_pred -hcCcccccchhhheEEE-CCeEEEEECccccccC
Confidence 47999999999999999 7899999999997664
No 480
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=98.62 E-value=1.6e-08 Score=106.59 Aligned_cols=88 Identities=27% Similarity=0.357 Sum_probs=66.9
Q ss_pred CCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCCCCccccCcccccccccc
Q 011005 16 NLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGSIPGEITKLSRLDYLNLS 95 (496)
Q Consensus 16 ~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~l~~L~~l~l~ 95 (496)
+|+.|+|++|+|+ .+|.. .++|+.|+|++|+|+ .+|..+ .+|+.|+|++|+|+ .+|..+.++++|+.|+|+
T Consensus 383 ~L~~LdLs~N~Lt-~LP~l---~s~L~~LdLS~N~Ls-sIP~l~---~~L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs 453 (788)
T PRK15387 383 GLKELIVSGNRLT-SLPVL---PSELKELMVSGNRLT-SLPMLP---SGLLSLSVYRNQLT-RLPESLIHLSSETTVNLE 453 (788)
T ss_pred ccceEEecCCccc-CCCCc---ccCCCEEEccCCcCC-CCCcch---hhhhhhhhccCccc-ccChHHhhccCCCeEECC
Confidence 4666777777776 34432 356788888888887 466533 46888999999999 789999999999999999
Q ss_pred cccCCCCCCCCCCCCCc
Q 011005 96 SNKLSGPVPFSNNDLSS 112 (496)
Q Consensus 96 ~n~l~~~~~~~~~~l~~ 112 (496)
+|+|++..+..+..+.+
T Consensus 454 ~N~Ls~~~~~~L~~l~s 470 (788)
T PRK15387 454 GNPLSERTLQALREITS 470 (788)
T ss_pred CCCCCchHHHHHHHHhc
Confidence 99999877766644443
No 481
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=98.61 E-value=3.9e-09 Score=95.40 Aligned_cols=84 Identities=29% Similarity=0.402 Sum_probs=56.4
Q ss_pred CCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCCCCccccCccccccc
Q 011005 13 NLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGSIPGEITKLSRLDYL 92 (496)
Q Consensus 13 ~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~l~~L~~l 92 (496)
..+.|+.||||+|.|+ .+.++..-+|.++.|++|+|.|+ .+ +++..|++|+.||||+|.++ .+.++-..+.|.+.|
T Consensus 282 TWq~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~-~v-~nLa~L~~L~~LDLS~N~Ls-~~~Gwh~KLGNIKtL 357 (490)
T KOG1259|consen 282 TWQELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIR-TV-QNLAELPQLQLLDLSGNLLA-ECVGWHLKLGNIKTL 357 (490)
T ss_pred hHhhhhhccccccchh-hhhhhhhhccceeEEecccccee-ee-hhhhhcccceEeecccchhH-hhhhhHhhhcCEeee
Confidence 3445777777777776 55666666777777777777777 33 34777777777777777776 455555556666666
Q ss_pred ccccccCC
Q 011005 93 NLSSNKLS 100 (496)
Q Consensus 93 ~l~~n~l~ 100 (496)
.|++|.|.
T Consensus 358 ~La~N~iE 365 (490)
T KOG1259|consen 358 KLAQNKIE 365 (490)
T ss_pred ehhhhhHh
Confidence 66666665
No 482
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=98.60 E-value=7e-09 Score=93.76 Aligned_cols=117 Identities=26% Similarity=0.278 Sum_probs=88.2
Q ss_pred CCccccCChhccCCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCCCC
Q 011005 1 MYKIGIIPPEIGNLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGSIP 80 (496)
Q Consensus 1 ~n~~~~lp~~~~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~ 80 (496)
.|.|+.+-++..-+|.++.|++|+|+|. .+. .+..|++|+.||||+|.++ .+...=..|-++++|.|+.|.|. .+
T Consensus 293 ~N~I~~iDESvKL~Pkir~L~lS~N~i~-~v~-nLa~L~~L~~LDLS~N~Ls-~~~Gwh~KLGNIKtL~La~N~iE-~L- 367 (490)
T KOG1259|consen 293 GNLITQIDESVKLAPKLRRLILSQNRIR-TVQ-NLAELPQLQLLDLSGNLLA-ECVGWHLKLGNIKTLKLAQNKIE-TL- 367 (490)
T ss_pred ccchhhhhhhhhhccceeEEecccccee-eeh-hhhhcccceEeecccchhH-hhhhhHhhhcCEeeeehhhhhHh-hh-
Confidence 4778888888888999999999999998 443 4899999999999999998 45454456778888888888887 33
Q ss_pred ccccCcccccccccccccCCCCCC-CCCCCCCccccccccCCCC
Q 011005 81 GEITKLSRLDYLNLSSNKLSGPVP-FSNNDLSSMHTVVSLSPNN 123 (496)
Q Consensus 81 ~~~~~l~~L~~l~l~~n~l~~~~~-~~~~~l~~l~~~~~~~~n~ 123 (496)
.++..+-+|..||+++|+|..... ..+++|+-|+.+ .+.+||
T Consensus 368 SGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l-~L~~NP 410 (490)
T KOG1259|consen 368 SGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETL-RLTGNP 410 (490)
T ss_pred hhhHhhhhheeccccccchhhHHHhcccccccHHHHH-hhcCCC
Confidence 457777888888888888874322 346666666443 344444
No 483
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=98.59 E-value=6.1e-08 Score=102.74 Aligned_cols=88 Identities=27% Similarity=0.540 Sum_probs=45.2
Q ss_pred CccccCChhccCCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCCCCc
Q 011005 2 YKIGIIPPEIGNLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGSIPG 81 (496)
Q Consensus 2 n~~~~lp~~~~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~ 81 (496)
|+|+.+|..+. ++|+.|+|++|+++ .+|..+. ++|+.|+|++|+|+ .+|..+. ++|+.|+|++|+|+ .+|.
T Consensus 209 N~LtsLP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~Ls~N~L~-~LP~~l~--s~L~~L~Ls~N~L~-~LP~ 279 (754)
T PRK15370 209 NELKSLPENLQ--GNIKTLYANSNQLT-SIPATLP--DTIQEMELSINRIT-ELPERLP--SALQSLDLFHNKIS-CLPE 279 (754)
T ss_pred CCCCcCChhhc--cCCCEEECCCCccc-cCChhhh--ccccEEECcCCccC-cCChhHh--CCCCEEECcCCccC-cccc
Confidence 55555555443 35666666666655 3443332 24555555555555 4444433 35555666666655 3444
Q ss_pred cccCcccccccccccccCC
Q 011005 82 EITKLSRLDYLNLSSNKLS 100 (496)
Q Consensus 82 ~~~~l~~L~~l~l~~n~l~ 100 (496)
.+. ++|+.|++++|+|+
T Consensus 280 ~l~--~sL~~L~Ls~N~Lt 296 (754)
T PRK15370 280 NLP--EELRYLSVYDNSIR 296 (754)
T ss_pred ccC--CCCcEEECCCCccc
Confidence 432 25555555555555
No 484
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=98.51 E-value=1.7e-06 Score=76.72 Aligned_cols=153 Identities=17% Similarity=0.211 Sum_probs=99.0
Q ss_pred eecCCccccHHHHHH--HHhCCCCcceeeecCCeeEEEEEeCCCcEEEEEEcccchhHH--HHH------HHHHHHHHHH
Q 011005 188 IWNYDGRIVYEDLIE--ATEDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEELA--FIK------SFKNEAQVLS 257 (496)
Q Consensus 188 ~~~~~~~~~~~~~~~--~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--~~~------~~~~e~~~l~ 257 (496)
++.......+.++.. ..++|...+.+.......|.+-.. +|+.+++|..+...... ... ...+++..+.
T Consensus 12 vy~~e~~~~y~~l~~~i~~~~~~~~kv~k~~~r~~ValIei-~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~ 90 (229)
T PF06176_consen 12 VYYKENDEKYLELGEKILDNNYKIIKVFKNTKRNYVALIEI-DGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTD 90 (229)
T ss_pred EEEecCchHHHHHHHHHHhCCceEEEeecCCCccEEEEEEE-CCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHH
Confidence 333333333444432 457788888888888888888877 57889999887643211 111 1234455455
Q ss_pred hhcccc---cccccceeec-----CCeEEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCe
Q 011005 258 QVLHRN---IVKLYGYCLH-----KKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSI 329 (496)
Q Consensus 258 ~l~h~n---iv~~~~~~~~-----~~~~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i 329 (496)
+++..+ ...++.+... ....+++|||++|..|.+... ++. .+...+++++.-+| ..|+
T Consensus 91 ~i~~~g~~~~~~~yl~~ekk~~~~~~~~~ll~EYIeG~~l~d~~~-------i~e----~~~~ki~~~ikqlH---~~G~ 156 (229)
T PF06176_consen 91 KIRNEGFTEPADPYLAAEKKIFRYTSSYVLLMEYIEGVELNDIED-------IDE----DLAEKIVEAIKQLH---KHGF 156 (229)
T ss_pred HHHHcCccccccceeeeeeeeccceeEEEEEEEEecCeecccchh-------cCH----HHHHHHHHHHHHHH---HcCC
Confidence 554333 3333333322 234578999999987765432 222 24456788899999 7899
Q ss_pred EEeCCCCCceEecCCCCeEEccccccc
Q 011005 330 IHRDISSNNILLNSKLEAFVADFGTAR 356 (496)
Q Consensus 330 ~H~dlkp~Nil~~~~~~~kl~Dfg~~~ 356 (496)
+|+|..|.|+++++++ ++++||+..+
T Consensus 157 ~HGD~hpgNFlv~~~~-i~iID~~~k~ 182 (229)
T PF06176_consen 157 YHGDPHPGNFLVSNNG-IRIIDTQGKR 182 (229)
T ss_pred ccCCCCcCcEEEECCc-EEEEECcccc
Confidence 9999999999999765 8999998764
No 485
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=98.51 E-value=2.3e-06 Score=78.24 Aligned_cols=137 Identities=19% Similarity=0.251 Sum_probs=85.3
Q ss_pred ceeeecCCeeEEEEEeCCCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccc--cccccceeecCCeEEEEEEecCCCC
Q 011005 211 YCIGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRN--IVKLYGYCLHKKCMFLIYEYMERGS 288 (496)
Q Consensus 211 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~~~~~~~~~~~~~lV~e~~~~g~ 288 (496)
..||+|..+.||+. .+..+++|..+..... ....+|.++++.+..-+ +.+.+++....+...+|||+++|.+
T Consensus 7 ~~i~~G~t~~~y~~---~~~~~VlR~~~~~~~~---~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G~~ 80 (226)
T TIGR02172 7 TQTGEGGNGESYTH---KTGKWMLKLYNPGFDK---ETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVGKR 80 (226)
T ss_pred eeecCCCCcceeEe---cCCCEEEEeCCCCCCH---HHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCCcc
Confidence 45899999999984 2446788888764322 34688999999997544 4677888777778889999999963
Q ss_pred -hhhh---------------------hhCCCCCccCCHHHHH-HHHH----------HHHHH-HHHH--HhCCCCCeEEe
Q 011005 289 -LFCN---------------------LHNNEDAVELDWAKRV-NIVK----------AMAHA-LAYL--HHDCSPSIIHR 332 (496)
Q Consensus 289 -L~~~---------------------l~~~~~~~~~~~~~~~-~i~~----------~i~~~-l~~l--h~~~~~~i~H~ 332 (496)
+... ++..... ..+..... .+.. .+... ..+| +.. ...++|+
T Consensus 81 ~~~~~~~~~~~~~~~l~~~la~~l~~lH~~~~~-~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~-~~~~~Hg 158 (226)
T TIGR02172 81 SFSRIISDNPSRLEEIAKIFAEMAKKLHSTKCD-TSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPD-TSTCLHG 158 (226)
T ss_pred chhhhhcCCHHHHHHHHHHHHHHHHHHhCCCCC-CCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCC-CCceEec
Confidence 2111 1111000 11111100 0000 00011 1111 111 3467899
Q ss_pred CCCCCceEecCCCCeEEccccccc
Q 011005 333 DISSNNILLNSKLEAFVADFGTAR 356 (496)
Q Consensus 333 dlkp~Nil~~~~~~~kl~Dfg~~~ 356 (496)
|+.|.||++++++ +.++||+.+.
T Consensus 159 D~~~~Nii~~~~~-~~iIDwe~a~ 181 (226)
T TIGR02172 159 DFQIGNLITSGKG-TYWIDLGDFG 181 (226)
T ss_pred CCCCCcEEEcCCC-cEEEechhcC
Confidence 9999999999988 9999999874
No 486
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=98.51 E-value=1.2e-07 Score=100.48 Aligned_cols=89 Identities=27% Similarity=0.502 Sum_probs=53.0
Q ss_pred CCccccCChhccCCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCCCC
Q 011005 1 MYKIGIIPPEIGNLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGSIP 80 (496)
Q Consensus 1 ~n~~~~lp~~~~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~ 80 (496)
+|++..+|..+. .+|+.|+|++|+++ .+|..+. ++|+.|+|++|+|+ .+|+.+. ++|+.|+|++|+|+ .+|
T Consensus 229 ~N~LtsLP~~l~--~~L~~L~Ls~N~L~-~LP~~l~--s~L~~L~Ls~N~L~-~LP~~l~--~sL~~L~Ls~N~Lt-~LP 299 (754)
T PRK15370 229 SNQLTSIPATLP--DTIQEMELSINRIT-ELPERLP--SALQSLDLFHNKIS-CLPENLP--EELRYLSVYDNSIR-TLP 299 (754)
T ss_pred CCccccCChhhh--ccccEEECcCCccC-cCChhHh--CCCCEEECcCCccC-ccccccC--CCCcEEECCCCccc-cCc
Confidence 366677776543 35777777777776 5555443 46777777777776 4565543 46677777777666 344
Q ss_pred ccccCcccccccccccccCC
Q 011005 81 GEITKLSRLDYLNLSSNKLS 100 (496)
Q Consensus 81 ~~~~~l~~L~~l~l~~n~l~ 100 (496)
..+. ++|+.|++++|.++
T Consensus 300 ~~lp--~sL~~L~Ls~N~Lt 317 (754)
T PRK15370 300 AHLP--SGITHLNVQSNSLT 317 (754)
T ss_pred ccch--hhHHHHHhcCCccc
Confidence 4332 24555555555555
No 487
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=98.50 E-value=2.5e-07 Score=104.58 Aligned_cols=110 Identities=27% Similarity=0.401 Sum_probs=70.0
Q ss_pred CccccCChhccCCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCCCCc
Q 011005 2 YKIGIIPPEIGNLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGSIPG 81 (496)
Q Consensus 2 n~~~~lp~~~~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~ 81 (496)
|.++.+|..| .+.+|+.|+|++|++. .++..+..+++|+.|+|++|...+.+| .+..+++|+.|+|++|.....+|.
T Consensus 599 ~~l~~lP~~f-~~~~L~~L~L~~s~l~-~L~~~~~~l~~Lk~L~Ls~~~~l~~ip-~ls~l~~Le~L~L~~c~~L~~lp~ 675 (1153)
T PLN03210 599 YPLRCMPSNF-RPENLVKLQMQGSKLE-KLWDGVHSLTGLRNIDLRGSKNLKEIP-DLSMATNLETLKLSDCSSLVELPS 675 (1153)
T ss_pred CCCCCCCCcC-CccCCcEEECcCcccc-ccccccccCCCCCEEECCCCCCcCcCC-ccccCCcccEEEecCCCCccccch
Confidence 4455666655 4567777777777776 556666777777777777665333555 366677777777777654446677
Q ss_pred cccCcccccccccccccCCCCCCCCCCCCCcccc
Q 011005 82 EITKLSRLDYLNLSSNKLSGPVPFSNNDLSSMHT 115 (496)
Q Consensus 82 ~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~l~~ 115 (496)
.+.++++|+.|++++|...+.+|..+ ++++|+.
T Consensus 676 si~~L~~L~~L~L~~c~~L~~Lp~~i-~l~sL~~ 708 (1153)
T PLN03210 676 SIQYLNKLEDLDMSRCENLEILPTGI-NLKSLYR 708 (1153)
T ss_pred hhhccCCCCEEeCCCCCCcCccCCcC-CCCCCCE
Confidence 77777777777777754444555443 4555543
No 488
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=98.47 E-value=5.6e-08 Score=97.35 Aligned_cols=94 Identities=48% Similarity=0.682 Sum_probs=44.3
Q ss_pred CccccCChhccCCC-CCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCCCC
Q 011005 2 YKIGIIPPEIGNLK-NLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGSIP 80 (496)
Q Consensus 2 n~~~~lp~~~~~l~-~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~ 80 (496)
|.+..+|+....+. +|+.|++++|++. .+|..+..+++|+.|++++|+++ .+|.....++.|+.|++++|+++ .+|
T Consensus 126 n~i~~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N~l~-~l~~~~~~~~~L~~L~ls~N~i~-~l~ 202 (394)
T COG4886 126 NNITDIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFNDLS-DLPKLLSNLSNLNNLDLSGNKIS-DLP 202 (394)
T ss_pred cccccCccccccchhhcccccccccchh-hhhhhhhccccccccccCCchhh-hhhhhhhhhhhhhheeccCCccc-cCc
Confidence 34444444444442 5555555555554 33334445555555555555554 34444434455555555555554 344
Q ss_pred ccccCccccccccccccc
Q 011005 81 GEITKLSRLDYLNLSSNK 98 (496)
Q Consensus 81 ~~~~~l~~L~~l~l~~n~ 98 (496)
.....+..|+.|.+++|+
T Consensus 203 ~~~~~~~~L~~l~~~~N~ 220 (394)
T COG4886 203 PEIELLSALEELDLSNNS 220 (394)
T ss_pred hhhhhhhhhhhhhhcCCc
Confidence 333333345555555553
No 489
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=98.45 E-value=3.9e-07 Score=102.99 Aligned_cols=108 Identities=26% Similarity=0.301 Sum_probs=87.4
Q ss_pred CCccccCChhccCCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCCCC
Q 011005 1 MYKIGIIPPEIGNLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGSIP 80 (496)
Q Consensus 1 ~n~~~~lp~~~~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~ 80 (496)
.|++..+|..+..+++|+.|+|++|...+.+|+ +..+++|+.|+|++|.....+|..+..+++|+.|+|++|..-+.+|
T Consensus 620 ~s~l~~L~~~~~~l~~Lk~L~Ls~~~~l~~ip~-ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp 698 (1153)
T PLN03210 620 GSKLEKLWDGVHSLTGLRNIDLRGSKNLKEIPD-LSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILP 698 (1153)
T ss_pred CccccccccccccCCCCCEEECCCCCCcCcCCc-cccCCcccEEEecCCCCccccchhhhccCCCCEEeCCCCCCcCccC
Confidence 367888999999999999999998765557774 8889999999999987666899999999999999999865433777
Q ss_pred ccccCcccccccccccccCCCCCCCCCCCC
Q 011005 81 GEITKLSRLDYLNLSSNKLSGPVPFSNNDL 110 (496)
Q Consensus 81 ~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l 110 (496)
..+ ++++|+.|++++|...+.+|....++
T Consensus 699 ~~i-~l~sL~~L~Lsgc~~L~~~p~~~~nL 727 (1153)
T PLN03210 699 TGI-NLKSLYRLNLSGCSRLKSFPDISTNI 727 (1153)
T ss_pred CcC-CCCCCCEEeCCCCCCccccccccCCc
Confidence 765 78899999999887665666544333
No 490
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=98.42 E-value=2.3e-06 Score=86.37 Aligned_cols=139 Identities=20% Similarity=0.218 Sum_probs=88.6
Q ss_pred cceeeecCCeeEEEEEeCCCcEEEEEEcccchhHH------------------------------HHH------HHHHHH
Q 011005 210 RYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEELA------------------------------FIK------SFKNEA 253 (496)
Q Consensus 210 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~------------------------------~~~------~~~~e~ 253 (496)
.+.||.-+.|.||+|+.++|+.||||+-+..-... ..+ +|.+|+
T Consensus 166 ~~piaaASlaQVhrA~L~~G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~EA 245 (538)
T KOG1235|consen 166 EEPIAAASLAQVHRARLKNGEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKEA 245 (538)
T ss_pred cchhhhcchhheEEEEecCCCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHHH
Confidence 35699999999999999999999999987542110 111 123333
Q ss_pred HHHHhh----cccc------cccccceeecCCeEEEEEEecCCCChhhh--hhCCCCCccCCHHHHHHHHHHHHHHHHHH
Q 011005 254 QVLSQV----LHRN------IVKLYGYCLHKKCMFLIYEYMERGSLFCN--LHNNEDAVELDWAKRVNIVKAMAHALAYL 321 (496)
Q Consensus 254 ~~l~~l----~h~n------iv~~~~~~~~~~~~~lV~e~~~~g~L~~~--l~~~~~~~~~~~~~~~~i~~~i~~~l~~l 321 (496)
+-..++ .|-+ |.+++..+ ....+|+||||+|..+.+. +.+. .++...+..-+.+...-.-+
T Consensus 246 ~Nae~~~~~f~~~~~~~~V~VP~Vy~~~--st~RVLtME~~~G~~i~Dl~~i~~~----gi~~~~i~~~l~~~~~~qIf- 318 (538)
T KOG1235|consen 246 KNAERFRENFKDFSLLTYVLVPKVYWDL--STKRVLTMEYVDGIKINDLDAIDKR----GISPHDILNKLVEAYLEQIF- 318 (538)
T ss_pred HhHHHHHHHHHhcccccceeCCeehhhc--CcceEEEEEecCCccCCCHHHHHHc----CCCHHHHHHHHHHHHHHHHH-
Confidence 333333 2444 33333222 2346899999999877655 3332 34444433333332222222
Q ss_pred HhCCCCCeEEeCCCCCceEecC----CCCeEEcccccccccc
Q 011005 322 HHDCSPSIIHRDISSNNILLNS----KLEAFVADFGTARLLH 359 (496)
Q Consensus 322 h~~~~~~i~H~dlkp~Nil~~~----~~~~kl~Dfg~~~~~~ 359 (496)
..|++|+|-.|.||+++. ++.+.+.|||+.....
T Consensus 319 ----~~GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is 356 (538)
T KOG1235|consen 319 ----KTGFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVIS 356 (538)
T ss_pred ----hcCCccCCCCCCcEEEecCCCCCccEEEEccccccccc
Confidence 448999999999999984 6789999999987664
No 491
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=98.40 E-value=5.6e-06 Score=76.32 Aligned_cols=142 Identities=20% Similarity=0.259 Sum_probs=83.7
Q ss_pred ceeeecCCeeEEEEEeCCCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccc--cccccceeec---CCeEEEEEEecC
Q 011005 211 YCIGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRN--IVKLYGYCLH---KKCMFLIYEYME 285 (496)
Q Consensus 211 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~~~~~~~~---~~~~~lV~e~~~ 285 (496)
+.++.|..+.||+....+ ..+++|..... .....+.+|..+++.+...+ +.+++.+... ....+++|++++
T Consensus 3 ~~l~~G~~n~~~~v~~~~-~~~vlK~~~~~---~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~~i~ 78 (239)
T PF01636_consen 3 RPLSGGFSNRVYRVTTDD-GRYVLKFYRPP---DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLMEYIP 78 (239)
T ss_dssp EEEEESSSSEEEEEEETT-SEEEEEEESSH---HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEEEES
T ss_pred ccCCCCCeeeEEEEEECC-cEEEEEEeCCC---CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEEEec
Confidence 568999999999999877 68999997665 23356778999999986443 4566654422 335789999999
Q ss_pred CCChhh----------------h---hhCC-CCCccCCHHH---------HHHH------------HHHHHH-HHHHHHh
Q 011005 286 RGSLFC----------------N---LHNN-EDAVELDWAK---------RVNI------------VKAMAH-ALAYLHH 323 (496)
Q Consensus 286 ~g~L~~----------------~---l~~~-~~~~~~~~~~---------~~~i------------~~~i~~-~l~~lh~ 323 (496)
|..+.. . ++.. .....+.... .... ...+.. .+..++.
T Consensus 79 g~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (239)
T PF01636_consen 79 GRPLDDELSPEQRPELLRQLGRALAQLHQVPPPFSPFADWPEWRLEFLRQLESWTARLRASELFDDLEELEERLLQELEA 158 (239)
T ss_dssp SEEHHHTSTHHHHHHHHHHHHHHHHHHHHSHTTCCCHTHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccchhhhhhcccccccccccccccccccccccccccccccccchhhhhhhHHHHHHHHHHHHh
Confidence 987776 0 1111 0000111000 0000 111222 2333331
Q ss_pred ----CCCCCeEEeCCCCCceEec-CCCCeEEccccccc
Q 011005 324 ----DCSPSIIHRDISSNNILLN-SKLEAFVADFGTAR 356 (496)
Q Consensus 324 ----~~~~~i~H~dlkp~Nil~~-~~~~~kl~Dfg~~~ 356 (496)
.....++|+|+.|.||+++ +++.+.|+||+.+.
T Consensus 159 ~~~~~~~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~ 196 (239)
T PF01636_consen 159 LLPKPLPPVLIHGDLHPGNILVDPSDGRIGIIDFEDAG 196 (239)
T ss_dssp HHHCCSCEEEE-SS-SGGGEEEESSTTEEEE--GTT-E
T ss_pred hhccCCCcEEEEeccccccceeeeccceeEEEecccce
Confidence 1256799999999999999 55666799998774
No 492
>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B ....
Probab=98.33 E-value=3.5e-07 Score=59.41 Aligned_cols=36 Identities=47% Similarity=0.826 Sum_probs=16.2
Q ss_pred CCCEEeccCCcCCCCCchhhcCCcccCeecccccccC
Q 011005 40 NLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQ 76 (496)
Q Consensus 40 ~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~ 76 (496)
+|++|+|++|+|+ .+|+.+.+|++|+.|++++|+|+
T Consensus 2 ~L~~L~l~~N~i~-~l~~~l~~l~~L~~L~l~~N~i~ 37 (44)
T PF12799_consen 2 NLEELDLSNNQIT-DLPPELSNLPNLETLNLSNNPIS 37 (44)
T ss_dssp T-SEEEETSSS-S-SHGGHGTTCTTSSEEEETSSCCS
T ss_pred cceEEEccCCCCc-ccCchHhCCCCCCEEEecCCCCC
Confidence 3444444444444 34444444455555555544444
No 493
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.32 E-value=1.5e-08 Score=101.93 Aligned_cols=122 Identities=30% Similarity=0.356 Sum_probs=93.8
Q ss_pred CCccccCChhccCCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCch-hhcCCcccCeecccccccCCCC
Q 011005 1 MYKIGIIPPEIGNLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPP-EIASMKYLTQLDLSNNNIQGSI 79 (496)
Q Consensus 1 ~n~~~~lp~~~~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~-~~~~l~~L~~l~l~~N~l~~~~ 79 (496)
.|++..+-.++.-++.|+.|||++|+++.+ +.+..++.|+.|||++|+|+ .+|. ....+. |+.|.|++|-++ .+
T Consensus 173 yN~L~~mD~SLqll~ale~LnLshNk~~~v--~~Lr~l~~LkhLDlsyN~L~-~vp~l~~~gc~-L~~L~lrnN~l~-tL 247 (1096)
T KOG1859|consen 173 YNRLVLMDESLQLLPALESLNLSHNKFTKV--DNLRRLPKLKHLDLSYNCLR-HVPQLSMVGCK-LQLLNLRNNALT-TL 247 (1096)
T ss_pred hhhHHhHHHHHHHHHHhhhhccchhhhhhh--HHHHhcccccccccccchhc-cccccchhhhh-heeeeecccHHH-hh
Confidence 377777878888899999999999999855 37999999999999999999 5664 333444 999999999998 44
Q ss_pred CccccCcccccccccccccCCCCCCCC-CCCCCccccccccCCCCCCCCCC
Q 011005 80 PGEITKLSRLDYLNLSSNKLSGPVPFS-NNDLSSMHTVVSLSPNNGLCGNI 129 (496)
Q Consensus 80 ~~~~~~l~~L~~l~l~~n~l~~~~~~~-~~~l~~l~~~~~~~~n~~~c~~~ 129 (496)
.++.+|++|..||++.|-|.+---.. +..|..| ..+.+.+||..|..+
T Consensus 248 -~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L-~~L~LeGNPl~c~p~ 296 (1096)
T KOG1859|consen 248 -RGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSL-IVLWLEGNPLCCAPW 296 (1096)
T ss_pred -hhHHhhhhhhccchhHhhhhcchhhhHHHHHHHH-HHHhhcCCccccCHH
Confidence 46889999999999999997532111 1223334 235788999888753
No 494
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=98.31 E-value=2.6e-07 Score=92.57 Aligned_cols=112 Identities=44% Similarity=0.632 Sum_probs=91.7
Q ss_pred CCccccCChhccCCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCCCC
Q 011005 1 MYKIGIIPPEIGNLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGSIP 80 (496)
Q Consensus 1 ~n~~~~lp~~~~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~ 80 (496)
.|++..+|..+.++++|+.|++++|++. .+|...+.+++|+.|++++|+++ .+|.....+..|+.|.+++|++. ..+
T Consensus 149 ~N~i~~l~~~~~~l~~L~~L~l~~N~l~-~l~~~~~~~~~L~~L~ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~-~~~ 225 (394)
T COG4886 149 DNKIESLPSPLRNLPNLKNLDLSFNDLS-DLPKLLSNLSNLNNLDLSGNKIS-DLPPEIELLSALEELDLSNNSII-ELL 225 (394)
T ss_pred ccchhhhhhhhhccccccccccCCchhh-hhhhhhhhhhhhhheeccCCccc-cCchhhhhhhhhhhhhhcCCcce-ecc
Confidence 4788889888999999999999999998 67766668999999999999999 78887777778999999999655 466
Q ss_pred ccccCcccccccccccccCCCCCCCCCCCCCccccc
Q 011005 81 GEITKLSRLDYLNLSSNKLSGPVPFSNNDLSSMHTV 116 (496)
Q Consensus 81 ~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~l~~~ 116 (496)
..+..++++..+.+.+|++.. .+.....+++++.+
T Consensus 226 ~~~~~~~~l~~l~l~~n~~~~-~~~~~~~l~~l~~L 260 (394)
T COG4886 226 SSLSNLKNLSGLELSNNKLED-LPESIGNLSNLETL 260 (394)
T ss_pred hhhhhcccccccccCCceeee-ccchhcccccccee
Confidence 778888888888888888873 35566666666544
No 495
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=98.29 E-value=4.8e-07 Score=90.46 Aligned_cols=254 Identities=19% Similarity=0.156 Sum_probs=160.2
Q ss_pred ceeeecCCeeEEEEEeCCCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccc-cccccceeecCCeEEEEEEecCCC-C
Q 011005 211 YCIGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRN-IVKLYGYCLHKKCMFLIYEYMERG-S 288 (496)
Q Consensus 211 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~n-iv~~~~~~~~~~~~~lV~e~~~~g-~ 288 (496)
+-+++|+++.++|.+..-.+....+.+... ....-+++++.+++||| .+..++-+..+...+++++++.++ +
T Consensus 248 h~fvK~altknpKkRptaeklL~h~fvs~~------l~~rl~~eLLdK~n~P~~~v~~~~d~~~E~~~~i~~~i~s~~rs 321 (829)
T KOG0576|consen 248 HNFVKGALTKNPKKRPTAEKLLQHPFVSQT------LSRRLAIELLDKVNNPNPVVRYLEDYDGEDYLWIPMRICSTGRS 321 (829)
T ss_pred HHHHHHHhcCCCccCCChhhheeceeeccc------hhhHHHHHHHHHccCCCCcccccccCCcccccchhhhhhcCCcc
Confidence 447899999999987644444445554433 23456789999999999 777777777778899999999887 2
Q ss_pred hhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCCCcccc
Q 011005 289 LFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLL 368 (496)
Q Consensus 289 L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 368 (496)
-...... ....+..-+...+.+.-+++++++|+ -.=+|+| ||+.++ +..+..||+....+.... .....
T Consensus 322 ~~~~~~~--se~~~~~~~~~~~~r~et~~l~~l~~---~~~~~~d----~~l~s~-~~~~~~~~~v~~~L~~~~-~~~t~ 390 (829)
T KOG0576|consen 322 SALEMTV--SEIALEQYQFAYPLRKETRPLAELHS---SYKVHRD----NILGSE-EEVKLLDFAVPPQLTRTM-KPRTA 390 (829)
T ss_pred ccccCCh--hhHhhhhhhhhhhhhhhccccccccc---ccccCcc----cccccc-cccccccccCCcccCccc-ccccC
Confidence 2211111 11123333444566777889999994 3347887 777766 578999999987765432 34456
Q ss_pred ccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHHHHHHHHH
Q 011005 369 AGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVIRDILLIS 448 (496)
Q Consensus 369 ~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 448 (496)
.+++.++|||+.....+....|+|+.|.-..++.-|-+|... +. ....++..- ...+.... ...+.....
T Consensus 391 ~~~~~~~~pev~~~~~~~~~p~~~~~~~~~~~~ap~~pPr~~--P~----~~~~~~g~~--p~s~~L~~--~~aw~~~~~ 460 (829)
T KOG0576|consen 391 IGTPEPLAPEVIQENTIDGCPDSGSLAVSAIQMAPGLPPRSS--PP----AVLPMIGNG--PNSPMLTD--KSAWSPVFH 460 (829)
T ss_pred CCCCCCCCchhhcccccccCCCccCCCcchhhcCCCCCCCCC--Cc----cccCCCCCC--CCccccch--hhhcCcccc
Confidence 789999999999999999999999999988888888777431 00 000000000 00000000 000000011
Q ss_pred -HHHHhcccCCCCCCCCHHHHHHHHHHhccCCCCCcccccccchh
Q 011005 449 -TVSFACLQSNPKSRPTMQSVSQEFLITRKTPLVKHAAIQDISIS 492 (496)
Q Consensus 449 -~li~~cl~~dP~~Rps~~evl~~~~~~~~~~~~~~~~~~~i~~~ 492 (496)
++...|+..-|..|+.....+.+-++-+ -|..-+.+..-|+++
T Consensus 461 ~~~~~~~~~g~P~~pkv~mgacfsKvfng-Cpl~i~~aaswIhp~ 504 (829)
T KOG0576|consen 461 RDFPAPCLNGLPPTPKVHMGACFSKVFNG-CPLRIHCAASWIHPS 504 (829)
T ss_pred cCCcccccCCCCCCCcchhhHHHHHHhcc-CcccceecccccCcc
Confidence 2445799999999999888887766543 334344444444444
No 496
>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B ....
Probab=98.28 E-value=5.9e-07 Score=58.34 Aligned_cols=37 Identities=43% Similarity=0.694 Sum_probs=32.5
Q ss_pred CCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCC
Q 011005 15 KNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLS 52 (496)
Q Consensus 15 ~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~ 52 (496)
++|++|+|++|+|+ .+|..+++|++|+.|+|++|+|+
T Consensus 1 ~~L~~L~l~~N~i~-~l~~~l~~l~~L~~L~l~~N~i~ 37 (44)
T PF12799_consen 1 KNLEELDLSNNQIT-DLPPELSNLPNLETLNLSNNPIS 37 (44)
T ss_dssp TT-SEEEETSSS-S-SHGGHGTTCTTSSEEEETSSCCS
T ss_pred CcceEEEccCCCCc-ccCchHhCCCCCCEEEecCCCCC
Confidence 58999999999999 67777999999999999999999
No 497
>PLN02876 acyl-CoA dehydrogenase
Probab=98.21 E-value=1.7e-05 Score=86.59 Aligned_cols=80 Identities=26% Similarity=0.411 Sum_probs=57.5
Q ss_pred cceeeecCCeeEEEEEeCCC---cEEEEEEcccchhHHHHHHHHHHHHHHHhhc-cccc--ccccceeecC---CeEEEE
Q 011005 210 RYCIGTGGYGSVYKAQLPNG---KVFALKKLHTSEELAFIKSFKNEAQVLSQVL-HRNI--VKLYGYCLHK---KCMFLI 280 (496)
Q Consensus 210 ~~~lg~G~~g~Vy~~~~~~~---~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~-h~ni--v~~~~~~~~~---~~~~lV 280 (496)
...++.|.+..+|+....++ ..+++|+............+.+|+++++.+. |.++ .+++.++.+. +..++|
T Consensus 43 v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~flV 122 (822)
T PLN02876 43 VSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAFYI 122 (822)
T ss_pred EEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCceEE
Confidence 45688999999999877554 4678887654332122346789999999995 6665 6777777654 357899
Q ss_pred EEecCCCCh
Q 011005 281 YEYMERGSL 289 (496)
Q Consensus 281 ~e~~~~g~L 289 (496)
|||++|..+
T Consensus 123 ME~v~G~~~ 131 (822)
T PLN02876 123 MEYLEGRIF 131 (822)
T ss_pred EEecCCccc
Confidence 999998653
No 498
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=98.21 E-value=1.6e-05 Score=73.99 Aligned_cols=139 Identities=15% Similarity=0.145 Sum_probs=84.9
Q ss_pred eeecCC-eeEEEEEeCCCcEEEEEEcccchhHHHHHHHHHHHHHHHhhc-ccccccccceeecCCeEEEEEEecCCCChh
Q 011005 213 IGTGGY-GSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVL-HRNIVKLYGYCLHKKCMFLIYEYMERGSLF 290 (496)
Q Consensus 213 lg~G~~-g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lV~e~~~~g~L~ 290 (496)
|..|.+ ..||+.... +..+++|...... ...+.+|+++++.+. +--+.+++++....+..++|||+++|.++.
T Consensus 6 ~~~g~~~~~v~~~~~~-~~~~~vk~~~~~~----~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~ 80 (244)
T cd05150 6 VTEGQSGATVYRLDGK-NPGLYLKIAPSGP----TYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVPGVPAA 80 (244)
T ss_pred cCCCCCcCeEEEEcCC-CCcEEEEecCCCc----ccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEeeCCccHh
Confidence 445555 789999775 4678888876543 234678999998885 444557777777666788999999998775
Q ss_pred hhh-------------------hCCCC-CccCC--HHHHHHHHH--------------------HHHHHHHHHHh----C
Q 011005 291 CNL-------------------HNNED-AVELD--WAKRVNIVK--------------------AMAHALAYLHH----D 324 (496)
Q Consensus 291 ~~l-------------------~~~~~-~~~~~--~~~~~~i~~--------------------~i~~~l~~lh~----~ 324 (496)
... +.... ...+. ......... .+......|-. .
T Consensus 81 ~~~~~~~~~~~~~~l~~~l~~lH~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 160 (244)
T cd05150 81 ALWEELEPERLVDALAEALRRLHALPVADCPFDRRLDRRLAEARARVENGLVDEDDFDDERRGWSAEELYAELEATRPAE 160 (244)
T ss_pred HhhcccCHHHHHHHHHHHHHHHhcCCcccCCcchhHHHHHHHHHHHHhcCCcChhhCcHhhcCCCHHHHHHHHHhhCCCc
Confidence 432 11110 00111 000000000 01111222211 0
Q ss_pred CCCCeEEeCCCCCceEecCCCCeEEccccccc
Q 011005 325 CSPSIIHRDISSNNILLNSKLEAFVADFGTAR 356 (496)
Q Consensus 325 ~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~ 356 (496)
....++|+|+.|.||+++++..+.|+||+.+.
T Consensus 161 ~~~~l~HgD~~~~Nil~~~~~~~~iIDwe~a~ 192 (244)
T cd05150 161 EDLVVTHGDACLPNIIVDPGKFSGFIDLGRLG 192 (244)
T ss_pred CceEEECCCCCCccEEEeCCcEEEEEEccccc
Confidence 13568999999999999998778899999774
No 499
>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=98.21 E-value=6.6e-06 Score=72.63 Aligned_cols=105 Identities=23% Similarity=0.297 Sum_probs=83.9
Q ss_pred HHHHHHHHhhcc-cccccccceeecCCeEEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCC
Q 011005 250 KNEAQVLSQVLH-RNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPS 328 (496)
Q Consensus 250 ~~e~~~l~~l~h-~niv~~~~~~~~~~~~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~ 328 (496)
..|.-+++.+.+ +++++++|+|- .++|.||...+++...-.........+|..+.+|+.++++.+.++++.....
T Consensus 7 ~~E~lll~~l~~~~~~pk~lG~CG----~~~v~E~~~~~~~~~~~~~l~~~~~~~w~~R~~iA~~lL~~l~~l~~~~~~~ 82 (188)
T PF12260_consen 7 NNEPLLLQLLQGSEPFPKLLGSCG----RFYVVEYVGAGSLYGIYRPLSQFLQSPWEQRAKIALQLLELLEELDHGPLGF 82 (188)
T ss_pred ccHHHHHHHcCCCCCCCCeeeECC----CEEEEEeecCccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence 468888999975 69999999994 3689999987766532111111125699999999999999999999765566
Q ss_pred eEEeCCCCCceEecCCCCeEEccccccccc
Q 011005 329 IIHRDISSNNILLNSKLEAFVADFGTARLL 358 (496)
Q Consensus 329 i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 358 (496)
+.-.|++|+|+-+++++.+|++|...+...
T Consensus 83 ~~lcDv~~~nfgv~~~~~lk~iDld~v~~~ 112 (188)
T PF12260_consen 83 FYLCDVSPDNFGVNDDGRLKLIDLDDVFVE 112 (188)
T ss_pred EEEeecchHHeEEeCCCcEEEEechhcchh
Confidence 888999999999999999999999887654
No 500
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.21 E-value=1.9e-07 Score=74.98 Aligned_cols=104 Identities=20% Similarity=0.238 Sum_probs=85.6
Q ss_pred CCccccCChhccC-CCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCCC
Q 011005 1 MYKIGIIPPEIGN-LKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGSI 79 (496)
Q Consensus 1 ~n~~~~lp~~~~~-l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~ 79 (496)
+|.+..+|+.|.. ++.++.|+|++|.|. .+|..+..++.|+.|+++.|.|. ..|..+..|.+|-.|+..+|.+. .+
T Consensus 62 ~N~fk~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~lNl~~N~l~-~~p~vi~~L~~l~~Lds~~na~~-ei 138 (177)
T KOG4579|consen 62 DNGFKKFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSLNLRFNPLN-AEPRVIAPLIKLDMLDSPENARA-EI 138 (177)
T ss_pred cchhhhCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhcccccCccc-cchHHHHHHHhHHHhcCCCCccc-cC
Confidence 4788889997775 568999999999998 78989999999999999999999 78888888999999999999998 66
Q ss_pred CccccCcccccccccccccCCCCCCCCC
Q 011005 80 PGEITKLSRLDYLNLSSNKLSGPVPFSN 107 (496)
Q Consensus 80 ~~~~~~l~~L~~l~l~~n~l~~~~~~~~ 107 (496)
|..+-.-..+-..++.++++.+.-+...
T Consensus 139 d~dl~~s~~~al~~lgnepl~~~~~~kl 166 (177)
T KOG4579|consen 139 DVDLFYSSLPALIKLGNEPLGDETKKKL 166 (177)
T ss_pred cHHHhccccHHHHHhcCCcccccCcccc
Confidence 6554443455556678888887655443
Done!