Query 011005
Match_columns 496
No_of_seqs 442 out of 4708
Neff 10.0
Searched_HMMs 29240
Date Mon Mar 25 18:50:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011005.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011005hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4b9d_A Serine/threonine-protei 100.0 6.7E-58 2.3E-62 441.1 16.9 259 205-478 24-284 (350)
2 4aw0_A HPDK1, 3-phosphoinositi 100.0 8.2E-58 2.8E-62 433.2 16.5 267 205-495 32-303 (311)
3 4fih_A Serine/threonine-protei 100.0 1.9E-57 6.4E-62 437.3 17.5 259 205-480 74-333 (346)
4 3hyh_A Carbon catabolite-derep 100.0 4.8E-56 1.6E-60 415.5 19.7 255 205-479 13-271 (275)
5 3fpq_A Serine/threonine-protei 100.0 5E-56 1.7E-60 419.2 19.8 251 208-477 29-289 (290)
6 4fie_A Serine/threonine-protei 100.0 4.5E-56 1.5E-60 438.1 18.2 259 205-480 151-410 (423)
7 3omv_A RAF proto-oncogene seri 100.0 1.1E-55 3.7E-60 419.8 20.2 258 205-477 36-300 (307)
8 4gt4_A Tyrosine-protein kinase 100.0 8.2E-56 2.8E-60 422.6 17.9 256 205-474 26-303 (308)
9 4aoj_A High affinity nerve gro 100.0 4.6E-55 1.6E-59 421.3 21.7 259 205-479 41-321 (329)
10 4asz_A BDNF/NT-3 growth factor 100.0 1.3E-55 4.6E-60 419.3 17.3 258 205-477 13-289 (299)
11 3ubd_A Ribosomal protein S6 ki 100.0 2.3E-56 7.7E-61 423.5 9.5 254 205-476 24-287 (304)
12 4g3f_A NF-kappa-beta-inducing 100.0 8.4E-55 2.9E-59 417.6 16.9 265 205-490 58-330 (336)
13 4g31_A Eukaryotic translation 100.0 1.4E-54 4.7E-59 413.1 17.1 257 204-476 4-285 (299)
14 4ase_A Vascular endothelial gr 100.0 9.9E-54 3.4E-58 415.3 16.6 260 201-475 60-345 (353)
15 3hmm_A TGF-beta receptor type- 100.0 7E-53 2.4E-57 403.3 21.2 267 205-478 3-298 (303)
16 4b99_A Mitogen-activated prote 100.0 1.9E-51 6.4E-56 406.2 18.7 267 205-478 54-352 (398)
17 4f9c_A Cell division cycle 7-r 100.0 2.4E-50 8.1E-55 394.2 20.9 264 201-476 17-358 (361)
18 3uto_A Twitchin; kinase, muscl 100.0 3.5E-49 1.2E-53 408.8 21.7 261 204-479 156-419 (573)
19 3v5w_A G-protein coupled recep 100.0 4.5E-49 1.5E-53 405.2 20.1 255 205-476 189-455 (689)
20 3fxz_A Serine/threonine-protei 100.0 4.9E-47 1.7E-51 363.6 20.8 261 204-481 19-280 (297)
21 3fe3_A MAP/microtubule affinit 100.0 7.7E-47 2.6E-51 366.7 20.4 256 204-478 14-272 (328)
22 3zgw_A Maternal embryonic leuc 100.0 5.1E-47 1.8E-51 370.0 17.1 259 203-479 8-269 (347)
23 1tki_A Titin; serine kinase, m 100.0 2.4E-46 8.1E-51 362.6 20.0 262 204-481 4-268 (321)
24 2c30_A Serine/threonine-protei 100.0 7E-46 2.4E-50 359.5 22.8 269 193-478 23-302 (321)
25 1o6l_A RAC-beta serine/threoni 100.0 4.8E-46 1.6E-50 362.1 21.0 254 205-476 5-266 (337)
26 3uim_A Brassinosteroid insensi 100.0 3.2E-46 1.1E-50 363.1 19.6 282 193-477 18-311 (326)
27 3niz_A Rhodanese family protei 100.0 7.2E-46 2.5E-50 357.9 21.9 266 204-479 20-309 (311)
28 3soa_A Calcium/calmodulin-depe 100.0 3.1E-46 1.1E-50 376.2 20.1 261 203-477 9-274 (444)
29 3tki_A Serine/threonine-protei 100.0 4.8E-46 1.6E-50 360.9 19.5 260 204-478 6-269 (323)
30 2yab_A Death-associated protei 100.0 5.7E-46 1.9E-50 364.8 19.8 259 203-476 10-278 (361)
31 3qd2_B Eukaryotic translation 100.0 3E-46 1E-50 364.0 17.6 258 203-476 4-331 (332)
32 3txo_A PKC-L, NPKC-ETA, protei 100.0 2.2E-46 7.5E-51 366.9 16.4 255 204-476 22-286 (353)
33 3p86_A Serine/threonine-protei 100.0 8.4E-46 2.9E-50 356.9 19.9 260 204-477 36-298 (309)
34 2zv2_A Calcium/calmodulin-depe 100.0 1.1E-45 3.7E-50 354.7 19.5 256 204-476 12-298 (298)
35 2bdw_A Hypothetical protein K1 100.0 1.3E-45 4.4E-50 363.2 20.4 260 203-477 27-291 (362)
36 4dc2_A Protein kinase C IOTA t 100.0 9.2E-46 3.1E-50 366.6 18.2 262 204-476 51-324 (396)
37 3kn6_A Ribosomal protein S6 ki 100.0 7.3E-46 2.5E-50 359.9 17.1 262 210-482 16-282 (325)
38 3c0i_A Peripheral plasma membr 100.0 1E-45 3.6E-50 362.8 18.3 263 203-477 22-293 (351)
39 4aw2_A Serine/threonine-protei 100.0 1.5E-46 5E-51 377.1 12.4 264 197-476 66-344 (437)
40 3h4j_B AMPK kdaid, SNF1-like p 100.0 1.2E-45 4.2E-50 358.8 17.9 253 205-479 9-267 (336)
41 2y0a_A Death-associated protei 100.0 2.2E-45 7.4E-50 356.9 19.0 260 203-477 9-278 (326)
42 3a8x_A Protein kinase C IOTA t 100.0 2.9E-45 1E-49 358.1 19.6 261 205-476 9-281 (345)
43 1fot_A TPK1 delta, CAMP-depend 100.0 6.2E-45 2.1E-49 351.7 21.5 251 205-476 6-264 (318)
44 2qkw_B Protein kinase; three-h 100.0 1.9E-45 6.5E-50 356.8 17.8 273 198-477 32-315 (321)
45 1xjd_A Protein kinase C, theta 100.0 1.3E-45 4.3E-50 360.1 16.0 256 203-476 15-275 (345)
46 1ob3_A PFPK5, cell division co 100.0 1.1E-45 3.7E-50 352.8 15.1 266 205-476 2-286 (288)
47 4euu_A Serine/threonine-protei 100.0 8.9E-45 3E-49 351.8 21.5 265 205-477 9-309 (319)
48 2pmi_A Negative RE, cyclin-dep 100.0 3.8E-45 1.3E-49 353.9 18.8 274 204-481 4-304 (317)
49 2qr7_A Ribosomal protein S6 ki 100.0 1.9E-45 6.6E-50 358.9 16.5 259 203-477 20-284 (342)
50 3a62_A Ribosomal protein S6 ki 100.0 4.1E-45 1.4E-49 355.1 18.6 255 204-476 16-282 (327)
51 3uc3_A Serine/threonine-protei 100.0 3.8E-45 1.3E-49 359.9 18.6 262 204-480 19-284 (361)
52 2psq_A Fibroblast growth facto 100.0 1.3E-44 4.4E-49 357.4 22.4 258 204-475 80-362 (370)
53 3kul_A Ephrin type-A receptor 100.0 7.8E-45 2.7E-49 352.8 20.3 261 205-481 49-317 (325)
54 2i0e_A Protein kinase C-beta I 100.0 3.4E-45 1.2E-49 358.2 17.7 255 204-476 19-282 (353)
55 3s95_A LIMK-1, LIM domain kina 100.0 2E-44 6.9E-49 347.8 22.8 259 204-477 9-282 (310)
56 3kk8_A Calcium/calmodulin depe 100.0 1.1E-44 3.9E-49 345.0 20.6 267 204-485 5-276 (284)
57 3o0g_A Cell division protein k 100.0 2.4E-45 8.1E-50 351.2 15.7 262 205-478 2-290 (292)
58 2y94_A 5'-AMP-activated protei 100.0 3E-44 1E-48 364.0 24.2 256 205-479 16-275 (476)
59 2w4o_A Calcium/calmodulin-depe 100.0 6.2E-45 2.1E-49 356.8 17.7 261 203-480 51-315 (349)
60 1rdq_E PKA C-alpha, CAMP-depen 100.0 1.2E-44 4E-49 354.4 19.6 252 204-476 40-299 (350)
61 4eqm_A Protein kinase; transfe 100.0 8.6E-45 3E-49 347.5 18.3 259 204-475 10-273 (294)
62 3soc_A Activin receptor type-2 100.0 1.2E-44 4E-49 351.3 19.0 264 204-477 23-318 (322)
63 3gni_B Strad alpha; kinase fol 100.0 3.2E-44 1.1E-48 357.5 22.7 264 204-478 24-341 (389)
64 3hko_A Calcium/calmodulin-depe 100.0 1.2E-44 4.2E-49 354.8 19.0 268 200-478 21-338 (345)
65 1kob_A Twitchin; kinase, intra 100.0 2.2E-44 7.5E-49 356.7 20.9 261 204-479 50-313 (387)
66 4fr4_A YANK1, serine/threonine 100.0 2.6E-44 9.1E-49 355.0 20.6 257 204-476 14-277 (384)
67 4agu_A Cyclin-dependent kinase 100.0 2.6E-44 8.8E-49 347.2 19.7 266 205-480 3-294 (311)
68 2yex_A Serine/threonine-protei 100.0 4.8E-44 1.6E-48 339.2 21.2 263 203-480 5-271 (276)
69 3cok_A Serine/threonine-protei 100.0 1.8E-44 6E-49 342.6 18.1 259 204-479 10-271 (278)
70 2nru_A Interleukin-1 receptor- 100.0 1E-43 3.6E-48 342.3 23.7 275 193-476 13-305 (307)
71 3fdn_A Serine/threonine-protei 100.0 3.7E-44 1.3E-48 340.6 20.3 257 204-480 8-267 (279)
72 3sxs_A Cytoplasmic tyrosine-pr 100.0 3.5E-44 1.2E-48 338.6 19.9 256 204-477 7-264 (268)
73 4ejn_A RAC-alpha serine/threon 100.0 4.3E-45 1.5E-49 370.2 14.5 256 204-476 147-410 (446)
74 2eue_A Carbon catabolite derep 100.0 1.8E-44 6.3E-49 341.9 17.8 255 205-479 13-271 (275)
75 2vd5_A DMPK protein; serine/th 100.0 2.7E-45 9.1E-50 365.5 12.6 265 197-476 53-333 (412)
76 3lb7_A RAF proto-oncogene seri 100.0 5E-44 1.7E-48 344.2 21.0 261 204-478 35-301 (307)
77 3dbq_A Dual specificity protei 100.0 1.9E-44 6.5E-49 352.9 18.2 258 205-479 9-282 (343)
78 4hcu_A Tyrosine-protein kinase 100.0 2.2E-44 7.7E-49 340.2 18.0 255 205-477 10-266 (269)
79 3f3z_A Calcium/calmodulin-depe 100.0 3.1E-44 1.1E-48 340.7 19.0 262 203-481 7-272 (277)
80 3i6u_A CDS1, serine/threonine- 100.0 2.4E-44 8.2E-49 361.2 19.1 260 202-476 132-405 (419)
81 3llt_A Serine/threonine kinase 100.0 4.7E-44 1.6E-48 352.7 20.7 263 203-475 33-360 (360)
82 2a2a_A Death-associated protei 100.0 3.4E-44 1.2E-48 347.9 19.3 259 203-476 10-278 (321)
83 3v8s_A RHO-associated protein 100.0 3.5E-45 1.2E-49 364.4 12.4 260 199-477 63-336 (410)
84 3p1a_A MYT1 kinase, membrane-a 100.0 3.4E-44 1.2E-48 346.2 18.7 252 204-476 56-310 (311)
85 3q4u_A Activin receptor type-1 100.0 5.4E-44 1.9E-48 343.2 19.9 259 204-474 7-299 (301)
86 2zmd_A Dual specificity protei 100.0 5.2E-44 1.8E-48 355.4 20.3 258 205-479 56-329 (390)
87 3l9p_A Anaplastic lymphoma kin 100.0 1.7E-44 5.8E-49 356.2 16.6 262 204-479 70-347 (367)
88 3mtl_A Cell division protein k 100.0 4E-45 1.4E-49 354.8 11.7 269 205-479 2-290 (324)
89 3is5_A Calcium-dependent prote 100.0 1.8E-44 6.2E-49 343.8 15.8 259 204-476 21-284 (285)
90 2x4f_A Myosin light chain kina 100.0 3.2E-44 1.1E-48 354.6 18.0 253 210-477 94-349 (373)
91 3ttj_A Mitogen-activated prote 100.0 1E-43 3.5E-48 360.6 22.2 263 204-476 61-361 (464)
92 1nxk_A MAP kinase-activated pr 100.0 7.7E-44 2.6E-48 355.2 20.9 261 204-479 60-330 (400)
93 3vhe_A Vascular endothelial gr 100.0 1.6E-44 5.6E-49 355.8 15.7 264 199-475 16-353 (359)
94 3a7i_A MST3 kinase, serine/thr 100.0 7.7E-44 2.6E-48 342.6 19.8 259 204-480 21-280 (303)
95 1u5q_A Serine/threonine protei 100.0 5E-44 1.7E-48 350.0 18.8 258 204-481 53-316 (348)
96 1rjb_A FL cytokine receptor; k 100.0 7.5E-44 2.6E-48 349.0 19.9 263 203-478 43-335 (344)
97 3cbl_A C-FES, proto-oncogene t 100.0 2E-44 6.8E-49 357.2 15.8 257 204-476 113-373 (377)
98 3dls_A PAS domain-containing s 100.0 1.6E-44 5.4E-49 351.9 14.8 251 203-478 22-282 (335)
99 2rku_A Serine/threonine-protei 100.0 1.5E-43 5.1E-48 339.1 21.3 258 204-479 14-274 (294)
100 2vgo_A Serine/threonine-protei 100.0 1.3E-43 4.5E-48 337.7 20.8 264 204-487 13-279 (284)
101 2y7j_A Phosphorylase B kinase 100.0 1.3E-43 4.6E-48 349.5 21.5 265 197-476 86-365 (365)
102 2qol_A Ephrin receptor; recept 100.0 3.8E-44 1.3E-48 354.2 17.6 258 204-477 44-309 (373)
103 2r5t_A Serine/threonine-protei 100.0 2.5E-44 8.6E-49 354.5 16.1 255 204-476 37-299 (373)
104 3mwu_A Calmodulin-domain prote 100.0 8E-44 2.7E-48 364.8 20.0 262 203-480 20-286 (486)
105 3tt0_A Basic fibroblast growth 100.0 1.6E-43 5.6E-48 351.3 21.5 261 204-478 68-353 (382)
106 3c4z_A Rhodopsin kinase; Ser/T 100.0 1.3E-43 4.3E-48 363.4 21.1 261 205-476 185-454 (543)
107 2owb_A Serine/threonine-protei 100.0 1.5E-43 5.1E-48 345.4 20.6 258 204-479 40-300 (335)
108 3bhy_A Death-associated protei 100.0 7.9E-44 2.7E-48 339.0 17.9 260 204-478 4-273 (283)
109 3g33_A Cell division protein k 100.0 5.8E-44 2E-48 344.3 17.0 263 203-478 7-304 (308)
110 1luf_A Muscle-specific tyrosin 100.0 9.6E-44 3.3E-48 348.1 18.7 261 203-477 45-335 (343)
111 2jam_A Calcium/calmodulin-depe 100.0 1.1E-43 3.8E-48 341.6 18.6 262 203-481 7-272 (304)
112 3oz6_A Mitogen-activated prote 100.0 3E-44 1E-48 357.6 15.1 261 202-477 6-335 (388)
113 2ivs_A Proto-oncogene tyrosine 100.0 1.5E-43 5.3E-48 342.2 19.4 258 204-475 22-309 (314)
114 3gbz_A Kinase, CMGC CDK; ssgci 100.0 1.6E-44 5.5E-49 351.4 12.4 261 203-477 32-325 (329)
115 3nyv_A Calmodulin-domain prote 100.0 5.6E-44 1.9E-48 366.0 17.1 261 203-479 24-290 (484)
116 3mdy_A Bone morphogenetic prot 100.0 4.9E-43 1.7E-47 342.1 22.9 269 199-479 31-333 (337)
117 3gen_A Tyrosine-protein kinase 100.0 9.1E-44 3.1E-48 338.6 17.2 255 204-476 23-279 (283)
118 2acx_A G protein-coupled recep 100.0 6.5E-44 2.2E-48 366.3 17.3 259 204-476 183-450 (576)
119 3poz_A Epidermal growth factor 100.0 1.4E-43 4.9E-48 344.3 18.9 257 204-477 14-278 (327)
120 1ua2_A CAK, cell division prot 100.0 8.8E-44 3E-48 348.6 17.4 263 203-478 8-299 (346)
121 4aaa_A Cyclin-dependent kinase 100.0 3.3E-44 1.1E-48 349.6 13.9 268 204-477 24-313 (331)
122 3eqc_A Dual specificity mitoge 100.0 6.5E-44 2.2E-48 351.7 16.1 265 204-478 32-332 (360)
123 1t46_A HOMO sapiens V-KIT hard 100.0 1.6E-43 5.5E-48 341.9 18.5 260 204-476 22-306 (313)
124 3lm5_A Serine/threonine-protei 100.0 7.1E-44 2.4E-48 346.5 15.8 272 193-477 16-294 (327)
125 3q5i_A Protein kinase; CDPK, m 100.0 2.3E-43 7.9E-48 362.9 20.5 263 203-481 34-312 (504)
126 1csn_A Casein kinase-1; phosph 100.0 1.3E-43 4.4E-48 340.1 17.3 261 204-477 9-283 (298)
127 2ac3_A MAP kinase-interacting 100.0 6.5E-44 2.2E-48 345.2 15.2 268 204-479 11-304 (316)
128 3n9x_A Phosphotransferase; mal 100.0 2.8E-43 9.5E-48 355.1 20.4 268 204-478 25-369 (432)
129 3lij_A Calcium/calmodulin depe 100.0 1.4E-43 4.7E-48 363.6 18.3 259 203-477 35-298 (494)
130 2h6d_A 5'-AMP-activated protei 100.0 2.9E-43 1E-47 333.8 19.1 257 205-480 11-271 (276)
131 3ork_A Serine/threonine protei 100.0 2.4E-44 8.2E-49 347.4 11.8 260 204-477 11-280 (311)
132 3rp9_A Mitogen-activated prote 100.0 1.3E-43 4.4E-48 360.8 17.8 267 204-477 52-403 (458)
133 1t4h_A Serine/threonine-protei 100.0 3.5E-43 1.2E-47 335.8 19.5 254 206-477 27-289 (290)
134 3dtc_A Mitogen-activated prote 100.0 2.3E-43 7.8E-48 333.6 18.0 249 205-473 7-269 (271)
135 1mp8_A Focal adhesion kinase 1 100.0 3.2E-43 1.1E-47 334.5 18.9 255 204-475 14-274 (281)
136 4eut_A Serine/threonine-protei 100.0 2.8E-43 9.4E-48 351.3 19.0 268 204-478 8-310 (396)
137 2w5a_A Serine/threonine-protei 100.0 4.8E-44 1.7E-48 339.8 12.9 262 204-479 5-276 (279)
138 2clq_A Mitogen-activated prote 100.0 3.3E-43 1.1E-47 336.7 18.8 262 206-480 23-288 (295)
139 1cm8_A Phosphorylated MAP kina 100.0 2.4E-43 8.1E-48 347.9 18.2 266 204-480 24-317 (367)
140 1x8b_A WEE1HU, WEE1-like prote 100.0 1.4E-43 4.8E-48 338.0 16.0 254 203-477 9-286 (289)
141 2izr_A Casein kinase I isoform 100.0 9.7E-44 3.3E-48 346.1 15.1 258 204-475 8-279 (330)
142 3kvw_A DYRK2, dual specificity 100.0 2.2E-43 7.4E-48 355.2 17.8 270 204-483 96-421 (429)
143 2xrw_A Mitogen-activated prote 100.0 8.3E-43 2.8E-47 344.9 21.7 263 204-476 24-324 (371)
144 2pvf_A Fibroblast growth facto 100.0 7.5E-43 2.6E-47 340.4 20.8 260 204-477 34-318 (334)
145 2r3i_A Cell division protein k 100.0 2.7E-43 9.3E-48 338.1 17.0 264 205-480 3-293 (299)
146 3com_A Serine/threonine-protei 100.0 6.6E-43 2.2E-47 337.8 19.7 261 203-480 27-288 (314)
147 2a19_B Interferon-induced, dou 100.0 4E-43 1.4E-47 334.2 17.8 256 203-484 9-281 (284)
148 3q60_A ROP5B; pseudokinase, tr 100.0 1.8E-43 6.1E-48 349.9 15.9 261 205-477 62-359 (371)
149 3qup_A Tyrosine-protein kinase 100.0 5.7E-43 1.9E-47 339.7 19.2 264 203-480 21-301 (323)
150 2eva_A TAK1 kinase - TAB1 chim 100.0 1.1E-42 3.8E-47 335.0 21.1 254 205-477 8-263 (307)
151 3ugc_A Tyrosine-protein kinase 100.0 6.7E-44 2.3E-48 341.7 12.4 265 204-477 9-291 (295)
152 2ycf_A Serine/threonine-protei 100.0 2.6E-43 8.8E-48 341.9 16.6 259 203-476 8-280 (322)
153 3kex_A Receptor tyrosine-prote 100.0 2.2E-43 7.4E-48 342.8 15.7 256 205-477 13-276 (325)
154 2x7f_A TRAF2 and NCK-interacti 100.0 4.9E-43 1.7E-47 340.6 18.3 260 203-478 22-294 (326)
155 2b9h_A MAP kinase FUS3, mitoge 100.0 1E-42 3.5E-47 342.2 20.7 279 204-490 10-325 (353)
156 2i1m_A Macrophage colony-stimu 100.0 6.9E-44 2.3E-48 347.7 12.1 261 203-476 44-325 (333)
157 3qyz_A Mitogen-activated prote 100.0 6.4E-43 2.2E-47 344.9 19.1 260 204-478 26-321 (364)
158 1u59_A Tyrosine-protein kinase 100.0 1.4E-42 4.8E-47 331.1 20.8 255 205-476 9-271 (287)
159 3pfq_A PKC-B, PKC-beta, protei 100.0 4.1E-43 1.4E-47 371.2 18.9 255 204-476 340-603 (674)
160 3mi9_A Cell division protein k 100.0 2.2E-43 7.7E-48 346.6 15.6 272 204-481 16-322 (351)
161 4hgt_A Casein kinase I isoform 100.0 4.7E-43 1.6E-47 335.8 17.1 277 203-494 7-295 (296)
162 3kmu_A ILK, integrin-linked ki 100.0 9E-43 3.1E-47 329.4 18.8 253 204-476 9-269 (271)
163 1p4o_A Insulin-like growth fac 100.0 1E-43 3.5E-48 344.8 12.5 263 201-477 21-299 (322)
164 3og7_A AKAP9-BRAF fusion prote 100.0 4.5E-43 1.6E-47 334.8 16.5 259 204-476 23-287 (289)
165 3t9t_A Tyrosine-protein kinase 100.0 5.4E-43 1.8E-47 330.3 16.8 255 205-477 8-264 (267)
166 3pg1_A Mitogen-activated prote 100.0 3.5E-43 1.2E-47 346.7 16.2 276 196-478 13-324 (362)
167 1k9a_A Carboxyl-terminal SRC k 100.0 1.7E-42 5.7E-47 351.1 21.0 251 204-477 192-445 (450)
168 2pml_X PFPK7, Ser/Thr protein 100.0 4.4E-43 1.5E-47 344.1 16.2 262 204-477 30-329 (348)
169 2xir_A Vascular endothelial gr 100.0 9.1E-43 3.1E-47 337.1 18.1 261 203-476 25-309 (316)
170 3uzp_A CKI-delta, CKID, casein 100.0 1.1E-42 3.6E-47 333.4 18.3 276 204-494 8-295 (296)
171 2wtk_C Serine/threonine-protei 100.0 4.9E-42 1.7E-46 330.3 22.8 262 203-481 3-274 (305)
172 3gxj_A TGF-beta receptor type- 100.0 4.1E-44 1.4E-48 344.4 8.3 264 204-478 2-298 (303)
173 3byv_A Rhoptry kinase; malaria 100.0 1.1E-43 3.6E-48 352.2 11.5 249 204-476 72-365 (377)
174 2j7t_A Serine/threonine-protei 100.0 2.6E-43 8.8E-48 338.7 13.8 261 203-478 17-283 (302)
175 3nsz_A CK II alpha, casein kin 100.0 9.4E-43 3.2E-47 339.2 17.9 260 204-477 35-326 (330)
176 1qcf_A Haematopoetic cell kina 100.0 4.5E-43 1.5E-47 355.9 16.1 256 203-477 186-444 (454)
177 2yfx_A Tyrosine-protein kinase 100.0 8.9E-43 3E-47 338.9 17.5 262 204-479 29-306 (327)
178 1vzo_A Ribosomal protein S6 ki 100.0 2.6E-43 9E-48 346.2 13.7 259 204-476 53-327 (355)
179 2vwi_A Serine/threonine-protei 100.0 1.6E-43 5.3E-48 340.3 11.8 264 204-477 14-294 (303)
180 1phk_A Phosphorylase kinase; g 100.0 1.9E-42 6.4E-47 332.0 19.3 260 203-477 15-290 (298)
181 3fme_A Dual specificity mitoge 100.0 4.2E-43 1.4E-47 335.2 14.6 260 204-477 6-273 (290)
182 2fst_X Mitogen-activated prote 100.0 4.4E-43 1.5E-47 345.6 15.2 265 204-479 28-320 (367)
183 4f0f_A Serine/threonine-protei 100.0 3.2E-42 1.1E-46 328.6 20.5 252 204-473 18-285 (287)
184 4e5w_A Tyrosine-protein kinase 100.0 7.2E-43 2.5E-47 335.6 16.1 262 205-474 21-299 (302)
185 3lxp_A Non-receptor tyrosine-p 100.0 1.6E-42 5.4E-47 335.7 18.2 260 207-476 33-309 (318)
186 1opk_A P150, C-ABL, proto-onco 100.0 5E-43 1.7E-47 358.9 15.4 256 204-476 219-477 (495)
187 3cc6_A Protein tyrosine kinase 100.0 3E-42 1E-46 327.8 19.7 256 204-476 11-272 (281)
188 1wak_A Serine/threonine-protei 100.0 1.9E-42 6.4E-47 345.8 19.0 262 204-475 36-396 (397)
189 3lzb_A Epidermal growth factor 100.0 1.4E-42 4.9E-47 337.1 17.5 258 204-478 14-279 (327)
190 1mqb_A Ephrin type-A receptor 100.0 2.9E-42 1E-46 335.9 19.7 257 205-478 44-310 (333)
191 3an0_A Dual specificity mitoge 100.0 8.8E-43 3E-47 340.9 15.9 262 204-479 50-319 (340)
192 3f66_A Hepatocyte growth facto 100.0 7.1E-42 2.4E-46 328.1 21.6 257 205-477 25-291 (298)
193 3c1x_A Hepatocyte growth facto 100.0 2E-42 7E-47 341.5 18.3 258 206-479 90-357 (373)
194 4e7w_A Glycogen synthase kinas 100.0 2.1E-43 7.3E-48 351.6 11.4 264 205-477 40-328 (394)
195 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 1.3E-42 4.4E-47 352.1 16.9 255 204-477 183-440 (452)
196 3kfa_A Tyrosine-protein kinase 100.0 1.8E-42 6.2E-47 330.5 17.0 257 203-476 11-270 (288)
197 2wei_A Calmodulin-domain prote 100.0 2.3E-42 7.7E-47 329.7 17.5 260 202-477 19-283 (287)
198 3pls_A Macrophage-stimulating 100.0 6.4E-42 2.2E-46 328.3 20.7 257 206-477 22-287 (298)
199 1z57_A Dual specificity protei 100.0 6.7E-42 2.3E-46 334.2 21.1 259 204-477 13-335 (339)
200 2wqm_A Serine/threonine-protei 100.0 3.7E-42 1.3E-46 332.0 18.8 266 204-480 31-300 (310)
201 3cek_A Dual specificity protei 100.0 3.4E-42 1.2E-46 332.7 18.6 262 204-482 27-304 (313)
202 1b6c_B TGF-B superfamily recep 100.0 1E-41 3.4E-46 333.6 21.7 273 196-479 33-338 (342)
203 3brb_A Proto-oncogene tyrosine 100.0 8.3E-42 2.9E-46 330.0 20.7 259 203-475 32-306 (313)
204 3e3p_A Protein kinase, putativ 100.0 2.2E-42 7.6E-47 340.7 16.9 269 198-478 16-322 (360)
205 2vx3_A Dual specificity tyrosi 100.0 7.3E-42 2.5E-46 339.6 20.4 267 203-477 52-379 (382)
206 4exu_A Mitogen-activated prote 100.0 3.1E-42 1.1E-46 340.8 17.6 262 204-477 41-330 (371)
207 1qpc_A LCK kinase; alpha beta 100.0 4.3E-42 1.5E-46 326.3 17.7 254 204-475 12-267 (279)
208 2h34_A Serine/threonine-protei 100.0 4.8E-42 1.6E-46 330.9 18.3 260 204-478 33-297 (309)
209 3fhr_A MAP kinase-activated pr 100.0 5.2E-42 1.8E-46 334.5 18.7 263 203-480 26-297 (336)
210 3eb0_A Putative uncharacterize 100.0 9.1E-43 3.1E-47 346.2 13.6 258 202-476 4-327 (383)
211 1zy4_A Serine/threonine-protei 100.0 1.4E-42 4.8E-47 333.5 14.5 256 203-477 4-290 (303)
212 3g2f_A Bone morphogenetic prot 100.0 2.8E-42 9.6E-47 336.7 16.8 260 204-476 12-317 (336)
213 3op5_A Serine/threonine-protei 100.0 1.6E-42 5.4E-47 342.1 15.0 257 204-477 34-329 (364)
214 1fvr_A Tyrosine-protein kinase 100.0 4.9E-42 1.7E-46 333.6 18.2 259 204-477 24-300 (327)
215 4fvq_A Tyrosine-protein kinase 100.0 1.9E-42 6.6E-47 330.5 15.0 252 204-480 7-278 (289)
216 3rgf_A Cyclin-dependent kinase 100.0 1.5E-42 5.2E-47 347.2 14.6 268 204-478 19-341 (405)
217 3lxl_A Tyrosine-protein kinase 100.0 5.1E-42 1.8E-46 333.5 17.7 264 204-476 22-302 (327)
218 2v62_A Serine/threonine-protei 100.0 1.8E-42 6.1E-47 339.2 14.3 263 205-477 37-328 (345)
219 1j1b_A Glycogen synthase kinas 100.0 1.1E-42 3.6E-47 349.4 12.5 262 205-477 54-343 (420)
220 2buj_A Serine/threonine-protei 100.0 1.2E-41 4E-46 329.5 19.3 264 204-480 28-309 (317)
221 3aln_A Dual specificity mitoge 100.0 1.9E-42 6.6E-47 336.5 13.7 262 205-477 22-292 (327)
222 2i6l_A Mitogen-activated prote 100.0 7E-42 2.4E-46 331.4 17.6 260 204-479 10-314 (320)
223 1blx_A Cyclin-dependent kinase 100.0 4.9E-42 1.7E-46 333.5 16.4 264 203-479 9-305 (326)
224 1q8y_A SR protein kinase; tran 100.0 8.7E-42 3E-46 338.1 18.4 268 204-482 18-345 (373)
225 1xbb_A Tyrosine-protein kinase 100.0 1E-41 3.5E-46 325.8 18.2 253 204-474 15-276 (291)
226 2ozo_A Tyrosine-protein kinase 100.0 8E-42 2.7E-46 358.1 18.8 250 207-474 337-595 (613)
227 3ll6_A Cyclin G-associated kin 100.0 1.1E-41 3.7E-46 332.5 18.1 256 205-479 28-310 (337)
228 2rio_A Serine/threonine-protei 100.0 9.1E-42 3.1E-46 344.1 17.3 254 206-476 16-301 (434)
229 3coi_A Mitogen-activated prote 100.0 1.6E-41 5.4E-46 333.7 18.2 263 204-478 23-313 (353)
230 3e7e_A HBUB1, BUB1A, mitotic c 100.0 4E-41 1.4E-45 332.3 20.9 246 204-472 64-334 (365)
231 2eu9_A Dual specificity protei 100.0 4.2E-41 1.4E-45 330.8 20.6 261 204-479 18-342 (355)
232 2jii_A Serine/threonine-protei 100.0 2.5E-42 8.5E-47 339.2 11.6 259 205-480 42-339 (352)
233 3sv0_A Casein kinase I-like; t 100.0 1.3E-41 4.4E-46 345.3 16.8 259 204-475 6-276 (483)
234 1u46_A ACK-1, activated CDC42 100.0 9.9E-42 3.4E-46 325.8 15.0 259 204-478 17-285 (291)
235 1byg_A CSK, protein (C-termina 100.0 1.3E-41 4.5E-46 322.8 15.6 252 204-477 20-273 (278)
236 2h8h_A Proto-oncogene tyrosine 100.0 6.6E-42 2.3E-46 353.7 14.1 254 204-476 266-522 (535)
237 2w1i_A JAK2; chromosomal rearr 100.0 2.7E-41 9.2E-46 328.3 16.0 264 204-476 40-321 (326)
238 4fl3_A Tyrosine-protein kinase 100.0 5.3E-41 1.8E-45 352.7 19.3 246 211-474 375-628 (635)
239 2iwi_A Serine/threonine-protei 100.0 2.4E-41 8.2E-46 326.6 14.8 255 199-479 25-292 (312)
240 3p23_A Serine/threonine-protei 100.0 1.9E-41 6.3E-46 340.9 14.5 253 205-476 24-289 (432)
241 3a99_A Proto-oncogene serine/t 100.0 1.6E-41 5.4E-46 328.9 12.5 250 203-478 41-301 (320)
242 2dyl_A Dual specificity mitoge 100.0 4.8E-41 1.6E-45 325.3 14.7 259 204-477 24-290 (318)
243 3qa8_A MGC80376 protein; kinas 100.0 1.1E-41 3.8E-46 353.1 10.7 268 204-476 13-303 (676)
244 2j0j_A Focal adhesion kinase 1 100.0 2.2E-40 7.5E-45 349.3 19.0 255 204-475 389-649 (656)
245 2y4i_B KSR2, HKSR2, kinase sup 100.0 3.3E-41 1.1E-45 326.7 10.3 258 204-479 32-304 (319)
246 3m2w_A MAP kinase-activated pr 100.0 2.2E-39 7.6E-44 310.8 18.2 241 204-480 16-266 (299)
247 2pzi_A Probable serine/threoni 100.0 3E-39 1E-43 343.8 16.7 239 204-474 79-324 (681)
248 2vuw_A Serine/threonine-protei 100.0 1.7E-39 5.7E-44 317.0 10.1 248 204-475 19-336 (336)
249 3dzo_A Rhoptry kinase domain; 100.0 4.9E-39 1.7E-43 322.0 12.6 248 205-476 78-369 (413)
250 3uqc_A Probable conserved tran 100.0 7.3E-38 2.5E-42 297.8 19.6 234 204-478 30-266 (286)
251 4azs_A Methyltransferase WBDD; 100.0 3.4E-32 1.2E-36 281.7 5.9 186 213-408 242-438 (569)
252 3en9_A Glycoprotease, O-sialog 99.9 9.5E-28 3.2E-32 247.1 10.2 184 208-408 339-538 (540)
253 1zar_A RIO2 kinase; serine kin 99.9 2.2E-24 7.7E-29 203.7 11.0 163 200-393 85-274 (282)
254 1zth_A RIO1 serine protein kin 99.8 6.4E-20 2.2E-24 171.0 11.4 138 207-358 49-219 (258)
255 4gyi_A RIO2 kinase; protein ki 99.7 4.4E-18 1.5E-22 164.7 9.4 138 207-358 97-265 (397)
256 2v9t_B SLIT homolog 2 protein 99.7 9.5E-18 3.3E-22 152.4 10.7 127 1-128 41-168 (220)
257 2v70_A SLIT-2, SLIT homolog 2 99.7 1.2E-17 4E-22 151.8 10.6 127 1-128 41-169 (220)
258 2wfh_A SLIT homolog 2 protein 99.7 2.8E-17 9.6E-22 146.0 10.7 124 1-128 19-142 (193)
259 1w8a_A SLIT protein; signaling 99.7 2.4E-17 8.2E-22 146.4 9.6 124 1-127 17-141 (192)
260 3e6j_A Variable lymphocyte rec 99.7 9.6E-17 3.3E-21 146.7 12.6 126 1-128 49-175 (229)
261 3m19_A Variable lymphocyte rec 99.7 3.3E-16 1.1E-20 145.4 12.9 115 2-116 45-160 (251)
262 2o6s_A Variable lymphocyte rec 99.7 6.3E-16 2.2E-20 139.1 13.0 126 1-127 37-163 (208)
263 1p9a_G Platelet glycoprotein I 99.6 7E-16 2.4E-20 146.2 12.6 124 2-127 87-210 (290)
264 2o6r_A Variable lymphocyte rec 99.6 9.8E-16 3.3E-20 134.1 12.6 124 1-127 16-139 (177)
265 3rfs_A Internalin B, repeat mo 99.6 1.2E-15 4.2E-20 143.3 13.1 124 2-126 95-219 (272)
266 3rgz_A Protein brassinosteroid 99.6 2.2E-16 7.6E-21 170.2 9.0 130 6-139 623-752 (768)
267 2o6q_A Variable lymphocyte rec 99.6 1.7E-15 5.8E-20 142.2 13.0 114 2-115 71-185 (270)
268 2v9t_B SLIT homolog 2 protein 99.6 9.2E-16 3.1E-20 139.2 10.2 120 1-123 20-139 (220)
269 3m19_A Variable lymphocyte rec 99.6 2.8E-15 9.5E-20 139.1 12.5 125 2-127 69-194 (251)
270 1w8a_A SLIT protein; signaling 99.6 1.3E-15 4.3E-20 135.2 7.6 104 1-104 38-143 (192)
271 2wfh_A SLIT homolog 2 protein 99.6 2.7E-15 9.2E-20 133.1 9.3 101 1-101 40-140 (193)
272 3g39_A Variable lymphocyte rec 99.6 4E-15 1.4E-19 129.1 9.9 106 18-127 12-117 (170)
273 2r9u_A Variable lymphocyte rec 99.6 4.1E-15 1.4E-19 129.5 9.9 106 18-127 15-120 (174)
274 1ogq_A PGIP-2, polygalacturona 99.6 1.2E-15 4.1E-20 146.4 6.7 124 2-129 184-308 (313)
275 2je0_A Acidic leucine-rich nuc 99.6 1.1E-15 3.9E-20 129.6 5.7 113 2-116 27-145 (149)
276 4fcg_A Uncharacterized protein 99.6 3.2E-15 1.1E-19 144.4 9.3 100 14-115 182-281 (328)
277 3e6j_A Variable lymphocyte rec 99.6 8.6E-15 2.9E-19 133.7 11.7 118 1-122 28-145 (229)
278 3oja_A Leucine-rich immune mol 99.6 8.1E-16 2.8E-20 156.7 4.6 121 2-127 130-252 (487)
279 2ell_A Acidic leucine-rich nuc 99.6 3E-15 1E-19 129.8 7.5 114 1-116 33-152 (168)
280 1ogq_A PGIP-2, polygalacturona 99.6 1.4E-15 4.9E-20 145.9 5.3 120 2-122 60-184 (313)
281 2v70_A SLIT-2, SLIT homolog 2 99.6 6.3E-15 2.1E-19 133.7 9.3 119 1-122 20-139 (220)
282 1ozn_A Reticulon 4 receptor; N 99.6 3.8E-15 1.3E-19 140.9 8.1 120 2-122 90-211 (285)
283 3rfs_A Internalin B, repeat mo 99.6 1.9E-14 6.6E-19 135.1 12.3 114 2-116 73-186 (272)
284 2o6q_A Variable lymphocyte rec 99.6 2.2E-14 7.4E-19 134.6 12.5 117 1-117 46-163 (270)
285 3v47_A TOLL-like receptor 5B a 99.5 1E-14 3.4E-19 147.6 9.8 126 2-128 285-411 (455)
286 2xot_A Amphoterin-induced prot 99.5 2.8E-15 9.6E-20 146.8 5.6 115 1-115 48-167 (361)
287 3g39_A Variable lymphocyte rec 99.5 2.7E-14 9.1E-19 123.9 10.9 100 1-102 18-117 (170)
288 1p9a_G Platelet glycoprotein I 99.5 2.5E-14 8.7E-19 135.5 11.1 104 12-116 74-177 (290)
289 4fcg_A Uncharacterized protein 99.5 1.2E-14 4E-19 140.4 8.8 111 2-115 114-233 (328)
290 2o6s_A Variable lymphocyte rec 99.5 4.9E-14 1.7E-18 126.7 12.2 118 2-122 17-134 (208)
291 4g8a_A TOLL-like receptor 4; l 99.5 1.4E-14 4.7E-19 152.9 9.5 115 2-116 62-178 (635)
292 2o6r_A Variable lymphocyte rec 99.5 2.5E-14 8.5E-19 125.1 9.5 104 1-104 37-141 (177)
293 2r9u_A Variable lymphocyte rec 99.5 5.1E-14 1.7E-18 122.6 10.8 99 1-101 21-119 (174)
294 2xot_A Amphoterin-induced prot 99.5 1.4E-14 4.9E-19 141.8 8.1 119 1-122 27-146 (361)
295 3zyj_A Leucine-rich repeat-con 99.5 2.4E-14 8E-19 144.3 9.7 124 2-128 171-295 (440)
296 4g8a_A TOLL-like receptor 4; l 99.5 2.1E-14 7.3E-19 151.4 9.3 126 2-128 455-583 (635)
297 1ozn_A Reticulon 4 receptor; N 99.5 5.5E-14 1.9E-18 132.9 11.1 115 2-116 42-158 (285)
298 2z66_A Variable lymphocyte rec 99.5 2.4E-14 8.3E-19 136.9 8.6 114 2-115 111-227 (306)
299 3zyi_A Leucine-rich repeat-con 99.5 4.4E-14 1.5E-18 142.8 9.9 124 2-128 182-306 (452)
300 2z62_A TOLL-like receptor 4, v 99.5 6.2E-14 2.1E-18 131.9 9.3 114 2-115 38-153 (276)
301 1dce_A Protein (RAB geranylger 99.5 4.3E-14 1.5E-18 146.1 8.5 97 2-102 451-548 (567)
302 4ezg_A Putative uncharacterize 99.5 6.7E-14 2.3E-18 124.6 8.0 111 1-116 53-164 (197)
303 2z62_A TOLL-like receptor 4, v 99.5 1.2E-13 4.2E-18 129.9 9.9 109 2-110 62-172 (276)
304 2ifg_A High affinity nerve gro 99.5 6.8E-14 2.3E-18 136.3 8.3 98 2-101 19-117 (347)
305 3rgz_A Protein brassinosteroid 99.5 6.8E-14 2.3E-18 150.8 9.0 120 2-122 404-524 (768)
306 3oja_B Anopheles plasmodium-re 99.5 9.8E-14 3.4E-18 145.2 9.7 120 2-122 61-181 (597)
307 3o6n_A APL1; leucine-rich repe 99.5 1.3E-13 4.6E-18 136.5 9.8 121 1-122 54-175 (390)
308 3vq2_A TLR4, TOLL-like recepto 99.5 1.3E-13 4.6E-18 144.6 10.3 116 1-116 41-158 (606)
309 4b8c_D Glucose-repressible alc 99.4 1.6E-14 5.4E-19 154.0 2.7 116 3-123 212-327 (727)
310 2z66_A Variable lymphocyte rec 99.4 1.3E-13 4.5E-18 131.7 8.6 115 2-116 88-204 (306)
311 4ezg_A Putative uncharacterize 99.4 1.3E-13 4.4E-18 122.8 8.0 102 10-115 83-185 (197)
312 2id5_A Lingo-1, leucine rich r 99.4 1.1E-13 3.7E-18 141.0 8.5 100 16-115 33-132 (477)
313 1a9n_A U2A', U2A'; complex (nu 99.4 4.7E-14 1.6E-18 123.2 4.9 82 16-100 43-126 (176)
314 4eco_A Uncharacterized protein 99.4 4.5E-14 1.5E-18 148.8 4.6 119 2-122 193-340 (636)
315 4b8c_D Glucose-repressible alc 99.4 1.9E-13 6.4E-18 145.7 9.1 121 1-124 233-353 (727)
316 2z63_A TOLL-like receptor 4, v 99.4 1.9E-13 6.5E-18 142.3 8.7 125 2-127 406-533 (570)
317 2z80_A TOLL-like receptor 2, v 99.4 2E-13 6.8E-18 133.3 8.2 113 2-116 41-154 (353)
318 2xwt_C Thyrotropin receptor; s 99.4 1.2E-13 4.1E-18 127.0 6.0 111 2-114 41-158 (239)
319 2z80_A TOLL-like receptor 2, v 99.4 3.2E-13 1.1E-17 131.8 8.3 117 1-117 61-180 (353)
320 1ziw_A TOLL-like receptor 3; i 99.4 5.3E-13 1.8E-17 142.0 10.7 116 1-116 34-150 (680)
321 3j0a_A TOLL-like receptor 5; m 99.4 1.9E-13 6.3E-18 148.9 7.1 90 33-128 474-563 (844)
322 4ecn_A Leucine-rich repeat pro 99.4 7.6E-14 2.6E-18 150.3 4.0 119 2-122 435-583 (876)
323 2je0_A Acidic leucine-rich nuc 99.4 1.8E-13 6.1E-18 115.9 5.3 107 13-122 15-123 (149)
324 3vq2_A TLR4, TOLL-like recepto 99.4 5.5E-13 1.9E-17 140.0 10.1 119 1-122 20-138 (606)
325 2z81_A CD282 antigen, TOLL-lik 99.4 3.3E-13 1.1E-17 139.9 8.2 113 2-116 15-128 (549)
326 3zyi_A Leucine-rich repeat-con 99.4 7E-13 2.4E-17 134.0 10.2 113 2-116 64-176 (452)
327 2z7x_B TOLL-like receptor 1, v 99.4 2.3E-13 7.7E-18 140.2 6.7 111 1-116 9-120 (520)
328 3t6q_A CD180 antigen; protein- 99.4 5.5E-13 1.9E-17 140.0 9.5 115 2-116 43-158 (606)
329 1xku_A Decorin; proteoglycan, 99.4 9.6E-13 3.3E-17 127.1 10.4 106 7-116 163-268 (330)
330 4eco_A Uncharacterized protein 99.4 1.2E-13 4E-18 145.6 4.2 113 7-122 239-363 (636)
331 3zyj_A Leucine-rich repeat-con 99.4 8.7E-13 3E-17 132.7 10.3 112 3-116 54-165 (440)
332 2ft3_A Biglycan; proteoglycan, 99.4 9.1E-13 3.1E-17 127.4 10.0 106 2-110 182-287 (332)
333 2z63_A TOLL-like receptor 4, v 99.4 6.3E-13 2.2E-17 138.4 9.3 116 1-116 37-154 (570)
334 2ell_A Acidic leucine-rich nuc 99.4 5E-13 1.7E-17 115.6 7.2 99 1-101 58-161 (168)
335 2id5_A Lingo-1, leucine rich r 99.4 3.5E-13 1.2E-17 137.2 7.1 117 1-117 41-158 (477)
336 3v47_A TOLL-like receptor 5B a 99.4 4.2E-13 1.4E-17 135.7 7.3 115 2-116 40-159 (455)
337 3t6q_A CD180 antigen; protein- 99.4 3E-13 1E-17 142.0 6.2 103 11-113 421-526 (606)
338 3a79_B TLR6, VLRB.59, TOLL-lik 99.4 6.2E-13 2.1E-17 138.2 8.6 112 1-117 40-152 (562)
339 2z81_A CD282 antigen, TOLL-lik 99.4 5.8E-13 2E-17 138.0 8.0 117 1-117 35-154 (549)
340 3a79_B TLR6, VLRB.59, TOLL-lik 99.4 1.7E-12 5.8E-17 134.9 11.2 113 11-127 399-512 (562)
341 3oja_B Anopheles plasmodium-re 99.4 1.4E-12 4.6E-17 136.6 10.0 112 1-115 84-196 (597)
342 2z7x_B TOLL-like receptor 1, v 99.4 1.2E-12 3.9E-17 134.9 9.1 114 10-127 369-483 (520)
343 2ifg_A High affinity nerve gro 99.3 1.3E-12 4.5E-17 127.1 8.9 106 18-127 11-118 (347)
344 2ft3_A Biglycan; proteoglycan, 99.3 1.7E-12 6E-17 125.4 9.5 115 2-122 43-157 (332)
345 3o6n_A APL1; leucine-rich repe 99.3 2E-12 6.8E-17 128.0 10.1 113 1-116 78-191 (390)
346 4ecn_A Leucine-rich repeat pro 99.3 5.2E-13 1.8E-17 143.9 5.6 112 7-122 481-605 (876)
347 1dce_A Protein (RAB geranylger 99.3 7.7E-13 2.6E-17 136.7 6.7 102 16-123 442-544 (567)
348 1ziw_A TOLL-like receptor 3; i 99.3 2.2E-12 7.6E-17 137.3 10.4 118 2-122 14-131 (680)
349 1xku_A Decorin; proteoglycan, 99.3 2E-12 6.7E-17 124.9 8.9 110 2-116 41-150 (330)
350 1wwl_A Monocyte differentiatio 99.3 5.3E-13 1.8E-17 127.9 4.5 98 2-100 105-214 (312)
351 3o53_A Protein LRIM1, AGAP0063 99.3 5.7E-13 1.9E-17 128.0 4.3 121 2-127 130-252 (317)
352 3j0a_A TOLL-like receptor 5; m 99.3 1.8E-12 6.2E-17 141.1 8.6 115 2-116 34-153 (844)
353 2xwt_C Thyrotropin receptor; s 99.3 9E-13 3.1E-17 121.1 5.2 118 1-122 64-189 (239)
354 1h6t_A Internalin B; cell adhe 99.3 5.9E-12 2E-16 119.2 11.0 105 2-115 56-160 (291)
355 1wwl_A Monocyte differentiatio 99.3 7E-13 2.4E-17 127.0 3.9 103 13-116 93-206 (312)
356 3tm0_A Aminoglycoside 3'-phosp 99.3 6E-12 2.1E-16 117.3 10.1 146 201-356 10-212 (263)
357 1xeu_A Internalin C; cellular 99.3 5.4E-12 1.8E-16 117.6 9.4 105 2-116 51-155 (263)
358 1xeu_A Internalin C; cellular 99.3 7.2E-12 2.5E-16 116.7 9.9 116 1-127 72-187 (263)
359 1h6t_A Internalin B; cell adhe 99.3 9.2E-12 3.2E-16 117.9 10.0 106 2-116 78-183 (291)
360 1h6u_A Internalin H; cell adhe 99.3 9.5E-12 3.2E-16 118.8 10.0 107 1-116 50-156 (308)
361 1h6u_A Internalin H; cell adhe 99.3 1E-11 3.6E-16 118.5 10.3 105 2-115 73-177 (308)
362 1ds9_A Outer arm dynein; leuci 99.3 7E-14 2.4E-18 124.6 -5.2 115 3-123 36-151 (198)
363 4fmz_A Internalin; leucine ric 99.3 7.5E-12 2.6E-16 121.7 8.4 114 2-123 209-322 (347)
364 1a9n_A U2A', U2A'; complex (nu 99.3 1.8E-12 6.1E-17 113.1 3.5 97 1-100 51-153 (176)
365 1m9s_A Internalin B; cell inva 99.2 2.3E-11 8E-16 126.4 11.8 105 2-115 75-179 (605)
366 4ay9_X Follicle-stimulating ho 99.2 7.9E-12 2.7E-16 121.7 7.6 114 1-116 18-133 (350)
367 1m9s_A Internalin B; cell inva 99.2 1.7E-11 5.9E-16 127.4 9.9 113 1-123 96-208 (605)
368 1nd4_A Aminoglycoside 3'-phosp 99.2 1.7E-11 5.9E-16 114.0 8.5 136 206-356 21-213 (264)
369 4glp_A Monocyte differentiatio 99.2 6.3E-12 2.2E-16 120.2 5.6 104 11-115 141-255 (310)
370 4glp_A Monocyte differentiatio 99.2 1.2E-11 4.1E-16 118.3 7.4 118 1-123 154-283 (310)
371 3oja_A Leucine-rich immune mol 99.2 4.1E-12 1.4E-16 129.3 3.6 116 2-123 109-225 (487)
372 1ds9_A Outer arm dynein; leuci 99.2 7.1E-14 2.4E-18 124.5 -9.2 112 1-116 57-179 (198)
373 3dxp_A Putative acyl-COA dehyd 99.2 1.1E-10 3.9E-15 113.9 10.8 142 210-357 43-248 (359)
374 3o53_A Protein LRIM1, AGAP0063 99.1 5.6E-12 1.9E-16 121.0 1.1 112 1-116 153-267 (317)
375 1o6v_A Internalin A; bacterial 99.1 5.9E-11 2E-15 120.3 8.6 105 2-115 253-357 (466)
376 4fmz_A Internalin; leucine ric 99.1 5E-11 1.7E-15 115.8 7.7 106 2-116 187-292 (347)
377 3bz5_A Internalin-J, INLJ; leu 99.1 2.1E-10 7E-15 115.7 10.7 102 2-116 52-153 (457)
378 1o6v_A Internalin A; bacterial 99.1 1.6E-10 5.4E-15 117.1 9.7 111 2-122 231-341 (466)
379 3cvr_A Invasion plasmid antige 99.1 1.7E-10 5.8E-15 118.7 9.7 84 2-100 110-193 (571)
380 3cvr_A Invasion plasmid antige 99.1 3E-10 1E-14 116.9 10.8 85 2-100 69-153 (571)
381 4ay9_X Follicle-stimulating ho 99.1 1.7E-10 5.8E-15 112.3 7.2 122 1-122 39-164 (350)
382 3bz5_A Internalin-J, INLJ; leu 99.0 4.6E-10 1.6E-14 113.1 10.2 98 3-111 160-257 (457)
383 3g06_A SSPH2 (leucine-rich rep 99.0 1E-09 3.5E-14 114.2 10.9 46 63-113 241-286 (622)
384 2ast_B S-phase kinase-associat 99.0 9E-12 3.1E-16 120.5 -4.8 100 15-115 70-172 (336)
385 3sg8_A APH(2'')-ID; antibiotic 99.0 3.9E-10 1.3E-14 107.3 5.7 183 210-408 25-287 (304)
386 1jl5_A Outer protein YOPM; leu 98.9 2.5E-09 8.6E-14 107.6 10.9 79 15-101 131-209 (454)
387 3g06_A SSPH2 (leucine-rich rep 98.9 3.1E-10 1.1E-14 118.2 4.0 99 2-112 211-309 (622)
388 2ast_B S-phase kinase-associat 98.9 5.3E-11 1.8E-15 115.1 -3.8 91 7-97 110-205 (336)
389 2ca6_A RAN GTPase-activating p 98.9 4.6E-11 1.6E-15 118.0 -4.5 107 9-115 181-307 (386)
390 3goz_A Leucine-rich repeat-con 98.9 1.8E-10 6E-15 112.7 -1.2 106 2-107 8-129 (362)
391 2ca6_A RAN GTPase-activating p 98.8 1.4E-10 4.7E-15 114.5 -2.4 97 7-103 208-319 (386)
392 1jl5_A Outer protein YOPM; leu 98.8 6.9E-09 2.4E-13 104.4 10.0 100 2-116 101-200 (454)
393 3goz_A Leucine-rich repeat-con 98.8 4.3E-10 1.5E-14 109.9 -1.5 104 1-104 31-155 (362)
394 3sb4_A Hypothetical leucine ri 98.7 7.7E-09 2.6E-13 99.5 6.0 102 14-117 225-327 (329)
395 3r70_A Aminoglycoside phosphot 98.7 8.5E-08 2.9E-12 91.8 12.8 137 206-358 38-238 (320)
396 1z7x_W Ribonuclease inhibitor; 98.6 2.3E-10 7.7E-15 115.7 -8.4 88 13-100 254-354 (461)
397 3rw6_A Nuclear RNA export fact 98.6 1.6E-09 5.4E-14 99.8 -2.4 103 11-116 137-256 (267)
398 3sb4_A Hypothetical leucine ri 98.6 4.7E-08 1.6E-12 94.0 7.1 52 62-114 225-276 (329)
399 3rw6_A Nuclear RNA export fact 98.6 1.3E-08 4.5E-13 93.7 2.7 80 12-93 167-257 (267)
400 1z7x_W Ribonuclease inhibitor; 98.5 2E-09 7E-14 108.7 -6.0 87 14-100 198-297 (461)
401 3tdw_A Gentamicin resistance p 98.5 9.6E-07 3.3E-11 83.8 12.9 136 210-357 24-224 (306)
402 4gkh_A Aminoglycoside 3'-phosp 98.5 9.1E-07 3.1E-11 82.3 12.2 134 212-356 31-222 (272)
403 3d1u_A Putative fructosamine-3 98.4 1.2E-06 4.2E-11 82.1 10.5 75 210-289 20-97 (288)
404 3ovc_A Hygromycin-B 4-O-kinase 98.4 2.1E-06 7E-11 83.5 12.3 75 209-290 45-122 (362)
405 3un9_A NLR family member X1; l 98.3 1.1E-08 3.7E-13 100.0 -7.3 88 14-101 125-225 (372)
406 3ats_A Putative uncharacterize 98.2 1.9E-06 6.3E-11 83.7 8.3 81 211-291 26-122 (357)
407 4fdw_A Leucine rich hypothetic 98.2 2.1E-06 7.1E-11 84.6 7.2 115 3-122 236-356 (401)
408 2q83_A YTAA protein; 2635576, 98.2 6E-06 2E-10 79.5 10.3 139 212-356 39-251 (346)
409 3un9_A NLR family member X1; l 98.2 9.7E-08 3.3E-12 93.2 -2.6 90 13-102 153-254 (372)
410 3ogk_B Coronatine-insensitive 98.1 2.3E-07 8E-12 96.6 -0.9 92 11-102 432-528 (592)
411 1io0_A Tropomodulin; LRR prote 98.1 4.4E-07 1.5E-11 79.2 -0.4 92 10-101 31-137 (185)
412 4fdw_A Leucine rich hypothetic 98.0 9.1E-06 3.1E-10 80.0 7.2 113 2-118 212-330 (401)
413 2olc_A MTR kinase, methylthior 98.0 2.2E-05 7.5E-10 77.3 9.9 76 210-287 35-120 (397)
414 3ogk_B Coronatine-insensitive 98.0 7.2E-07 2.5E-11 92.9 -0.9 83 13-96 162-252 (592)
415 1io0_A Tropomodulin; LRR prote 98.0 2.6E-07 8.8E-12 80.7 -3.6 94 7-100 57-164 (185)
416 3e4g_A ATP synthase subunit S, 98.0 1.1E-06 3.9E-11 74.9 0.1 92 7-98 53-150 (176)
417 3jr1_A Putative fructosamine-3 97.9 0.00013 4.3E-09 69.0 13.0 138 210-353 41-232 (312)
418 2p1m_B Transport inhibitor res 97.8 1.3E-06 4.5E-11 91.0 -2.5 103 13-116 395-511 (594)
419 2ppq_A HSK, HK, homoserine kin 97.6 0.00037 1.3E-08 66.2 12.2 158 195-356 7-216 (322)
420 2pyw_A Uncharacterized protein 97.6 0.00018 6.1E-09 71.3 9.9 78 326-405 231-313 (420)
421 3f7w_A Putative fructosamine-3 97.6 0.00035 1.2E-08 65.3 11.1 78 207-289 17-97 (288)
422 2ra8_A Uncharacterized protein 97.6 1.1E-05 3.8E-10 78.1 0.4 103 14-116 192-312 (362)
423 2p1m_B Transport inhibitor res 97.6 3.1E-06 1.1E-10 88.1 -4.2 86 13-98 103-195 (594)
424 1zyl_A Hypothetical protein YI 97.5 0.0014 4.7E-08 62.4 14.4 158 195-357 11-223 (328)
425 3rfe_A Platelet glycoprotein I 97.4 0.00013 4.6E-09 59.1 4.8 55 19-75 12-67 (130)
426 3dxq_A Choline/ethanolamine ki 97.4 0.00065 2.2E-08 63.9 10.1 71 210-289 23-95 (301)
427 3rfe_A Platelet glycoprotein I 97.4 0.00027 9.2E-09 57.3 6.3 57 42-100 11-68 (130)
428 3csv_A Aminoglycoside phosphot 97.4 0.00047 1.6E-08 65.9 8.9 141 212-358 25-218 (333)
429 1nw1_A Choline kinase (49.2 KD 97.3 0.00057 2E-08 67.7 8.8 72 211-289 79-159 (429)
430 4h09_A Hypothetical leucine ri 97.3 0.00032 1.1E-08 68.4 6.9 104 10-116 235-338 (379)
431 4gt6_A Cell surface protein; l 97.3 0.00029 1E-08 69.1 6.6 103 10-116 260-362 (394)
432 4h09_A Hypothetical leucine ri 97.3 0.00034 1.2E-08 68.2 6.9 107 4-113 251-358 (379)
433 3feg_A Choline/ethanolamine ki 97.2 0.0013 4.4E-08 63.8 10.4 141 211-357 56-254 (379)
434 4fs7_A Uncharacterized protein 97.2 0.00025 8.4E-09 69.7 4.8 101 10-116 271-371 (394)
435 2ra8_A Uncharacterized protein 97.2 2.2E-05 7.6E-10 75.9 -2.6 107 7-117 164-285 (362)
436 4gt6_A Cell surface protein; l 97.1 0.00041 1.4E-08 68.0 5.1 106 5-116 277-383 (394)
437 4fs7_A Uncharacterized protein 96.9 0.0012 4.2E-08 64.6 7.0 101 10-116 248-348 (394)
438 3e4g_A ATP synthase subunit S, 96.9 6.1E-05 2.1E-09 64.2 -2.2 85 32-116 54-144 (176)
439 3i1a_A Spectinomycin phosphotr 96.8 0.0038 1.3E-07 59.7 9.5 66 216-289 34-108 (339)
440 2qg7_A Ethanolamine kinase PV0 96.8 0.004 1.4E-07 62.0 9.5 74 210-289 113-188 (458)
441 3c5i_A Choline kinase; choline 96.7 0.0045 1.6E-07 59.9 9.3 73 211-289 39-121 (369)
442 2yle_A Protein spire homolog 1 96.7 0.01 3.5E-07 51.8 9.7 103 287-407 33-135 (229)
443 1pgv_A TMD-1, tropomodulin TMD 96.6 0.00044 1.5E-08 60.0 0.5 87 12-98 38-137 (197)
444 3f2s_A CK, chetk-alpha, cholin 96.1 0.018 6.2E-07 56.0 9.3 142 211-356 58-279 (401)
445 1pgv_A TMD-1, tropomodulin TMD 95.3 0.0017 5.7E-08 56.3 -1.7 89 10-98 65-168 (197)
446 3mes_A Choline kinase; malaria 95.1 0.084 2.9E-06 51.8 9.6 73 211-289 76-157 (424)
447 3g15_A CK, chetk-alpha, cholin 94.3 0.22 7.6E-06 48.5 10.5 30 328-357 245-280 (401)
448 2ks1_B Epidermal growth factor 94.1 0.074 2.5E-06 33.1 4.2 11 160-170 29-39 (44)
449 2l2t_A Receptor tyrosine-prote 93.5 0.11 3.6E-06 32.3 4.1 14 140-153 7-20 (44)
450 4ann_A ESSB; membrane protein, 91.9 0.61 2.1E-05 40.6 8.3 118 260-411 43-160 (215)
451 2jwa_A Receptor tyrosine-prote 91.7 0.18 6.1E-06 31.2 3.3 17 154-170 23-39 (44)
452 4ano_A ESSB; membrane protein, 86.9 2.3 8E-05 37.1 8.1 117 260-411 48-165 (219)
453 3cxl_A N-chimerin; SH2, RHO-GA 85.3 0.093 3.2E-06 52.2 -1.8 61 209-272 146-214 (463)
454 2lz0_A Uncharacterized protein 64.5 13 0.00044 27.8 5.4 46 26-72 7-52 (100)
455 2lz0_A Uncharacterized protein 60.5 13 0.00043 27.8 4.8 47 2-49 6-53 (100)
456 2ks1_B Epidermal growth factor 55.3 21 0.00072 22.0 4.2 11 157-167 29-39 (44)
457 2jwa_A Receptor tyrosine-prote 47.3 14 0.00049 22.8 2.5 18 152-169 24-41 (44)
458 1pi7_A VPU protein, U ORF prot 39.9 27 0.00091 20.5 2.7 22 150-171 12-33 (36)
459 1iij_A ERBB-2 receptor protein 36.4 13 0.00045 21.6 1.0 6 163-168 28-33 (35)
460 2l9u_A Receptor tyrosine-prote 35.4 47 0.0016 18.9 3.2 8 162-169 27-34 (40)
461 3ls8_A Phosphatidylinositol 3- 32.9 3.6E+02 0.012 27.3 11.6 25 332-356 477-501 (614)
462 1cja_A Protein (actin-fragmin 28.0 1.6E+02 0.0055 27.3 7.4 77 276-357 156-237 (342)
No 1
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=6.7e-58 Score=441.06 Aligned_cols=259 Identities=23% Similarity=0.391 Sum_probs=211.7
Q ss_pred hCCCCcceeeecCCeeEEEEEe-CCCcEEEEEEcccch-hHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEE
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSE-ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYE 282 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e 282 (496)
++|++.+.||+|+||+||+|.+ .+|+.||||++.... .....+.+.+|+.++++++|||||++++++.+++.+|+|||
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE 103 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD 103 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEe
Confidence 6899999999999999999976 469999999997643 33445778999999999999999999999999999999999
Q ss_pred ecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCC
Q 011005 283 YMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADS 362 (496)
Q Consensus 283 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 362 (496)
||+||+|.+++.... ...+++..++.|+.||+.||+||| +++|+||||||+|||++.++.+||+|||+|+......
T Consensus 104 y~~gg~L~~~i~~~~-~~~~~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~ 179 (350)
T 4b9d_A 104 YCEGGDLFKRINAQK-GVLFQEDQILDWFVQICLALKHVH---DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTV 179 (350)
T ss_dssp CCTTCBHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHH---HTTCEETTCCGGGEEECTTCCEEECSTTEESCCCHHH
T ss_pred CCCCCcHHHHHHHcC-CCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCCHHHEEECCCCCEEEcccccceeecCCc
Confidence 999999999997543 235789999999999999999999 7899999999999999999999999999998765433
Q ss_pred CCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHHH
Q 011005 363 SNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVIR 442 (496)
Q Consensus 363 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (496)
......+||+.|||||++.+..|+.++||||+||++|||++|+.||... ........+.....++....
T Consensus 180 ~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~-------~~~~~~~~i~~~~~~~~~~~---- 248 (350)
T 4b9d_A 180 ELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAG-------SMKNLVLKIISGSFPPVSLH---- 248 (350)
T ss_dssp HHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCS-------SHHHHHHHHHHTCCCCCCTT----
T ss_pred ccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc-------CHHHHHHHHHcCCCCCCCcc----
Confidence 3334568999999999999999999999999999999999999999632 22233344444443322211
Q ss_pred HHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccC
Q 011005 443 DILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKT 478 (496)
Q Consensus 443 ~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~ 478 (496)
....+.+|+.+||+.||++|||++|+++|+|+.+..
T Consensus 249 ~s~~~~~li~~~L~~dP~~R~s~~e~l~hp~~~~~~ 284 (350)
T 4b9d_A 249 YSYDLRSLVSQLFKRNPRDRPSVNSILEKGFIAKRI 284 (350)
T ss_dssp SCHHHHHHHHHHTCSSGGGSCCHHHHHTSHHHHTTG
T ss_pred CCHHHHHHHHHHccCChhHCcCHHHHhcCHHhhcCC
Confidence 122477899999999999999999999999997653
No 2
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=8.2e-58 Score=433.23 Aligned_cols=267 Identities=22% Similarity=0.355 Sum_probs=223.7
Q ss_pred hCCCCcceeeecCCeeEEEEEe-CCCcEEEEEEcccch--hHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEE
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIY 281 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~ 281 (496)
++|++.+.||+|+||+||+|.+ .+|+.||||++.... .....+.+.+|++++++++|||||++++++.+++..|+||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm 111 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 5799999999999999999976 479999999997643 2234567899999999999999999999999999999999
Q ss_pred EecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCC
Q 011005 282 EYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHAD 361 (496)
Q Consensus 282 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 361 (496)
|||+||+|.+++.+.. .+++..+..++.||+.||+||| +++|+||||||+|||++.++.+||+|||+|+.+...
T Consensus 112 Ey~~gG~L~~~i~~~~---~l~e~~~~~~~~qi~~al~ylH---~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~ 185 (311)
T 4aw0_A 112 SYAKNGELLKYIRKIG---SFDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE 185 (311)
T ss_dssp CCCTTEEHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred ecCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCHHHeEEcCCCCEEEEEcCCceecCCC
Confidence 9999999999998654 6899999999999999999999 779999999999999999999999999999987543
Q ss_pred CC--CccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChh
Q 011005 362 SS--NRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRK 439 (496)
Q Consensus 362 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 439 (496)
.. .....+||+.|||||++.+..|+.++||||+||++|||++|+.||... ........+.......+..
T Consensus 186 ~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~-------~~~~~~~~i~~~~~~~p~~-- 256 (311)
T 4aw0_A 186 SKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG-------NEGLIFAKIIKLEYDFPEK-- 256 (311)
T ss_dssp TTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCS-------SHHHHHHHHHHTCCCCCTT--
T ss_pred CCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC-------CHHHHHHHHHcCCCCCCcc--
Confidence 32 344578999999999999999999999999999999999999999632 2222333344433322211
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCCCCCcccccccchhhhc
Q 011005 440 VIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTPLVKHAAIQDISISELR 495 (496)
Q Consensus 440 ~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~~~~~~~~~~i~~~~~~ 495 (496)
. ...+.+|+.+||+.||++|||++|++.+.|+. .++++++|.|+.++
T Consensus 257 ~---s~~~~dli~~lL~~dp~~R~t~~e~~~~~~i~------~Hp~F~~idw~~l~ 303 (311)
T 4aw0_A 257 F---FPKARDLVEKLLVLDATKRLGCEEMEGYGPLK------AHPFFESVTWENLH 303 (311)
T ss_dssp C---CHHHHHHHHHHSCSSGGGSTTSGGGTCHHHHH------TSGGGTTCCCTTGG
T ss_pred c---CHHHHHHHHHHccCCHhHCcChHHHcCCHHHH------CCCCcCCCCHHHhc
Confidence 1 12467899999999999999999987777764 46777888888765
No 3
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=1.9e-57 Score=437.25 Aligned_cols=259 Identities=25% Similarity=0.383 Sum_probs=217.0
Q ss_pred hCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEe
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEY 283 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~ 283 (496)
+.|++.+.||+|+||+||+|.++ +|+.||||++..... ...+.+.+|+.+++.++|||||++++++.+++.+||||||
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~-~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy 152 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ-QRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF 152 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGC-SSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCch-hHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeC
Confidence 56889999999999999999765 699999999965432 2235578999999999999999999999999999999999
Q ss_pred cCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCC
Q 011005 284 MERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSS 363 (496)
Q Consensus 284 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 363 (496)
|+||+|.+++... .+++..+..++.||+.||+||| +++|+||||||+|||++.++.+||+|||+|+.+.....
T Consensus 153 ~~gg~L~~~l~~~----~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~ 225 (346)
T 4fih_A 153 LEGGALTDIVTHT----RMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP 225 (346)
T ss_dssp CTTEEHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSC
T ss_pred CCCCcHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHH---HCCcccccCCHHHEEECCCCCEEEecCcCceecCCCCC
Confidence 9999999999753 5899999999999999999999 77999999999999999999999999999998866655
Q ss_pred CccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHHHH
Q 011005 364 NRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVIRD 443 (496)
Q Consensus 364 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 443 (496)
.....+||+.|||||++.+..|+.++||||+||++|||++|+.||.... .......+... .++.... ....
T Consensus 226 ~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~-------~~~~~~~i~~~-~~~~~~~-~~~~ 296 (346)
T 4fih_A 226 RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEP-------PLKAMKMIRDN-LPPRLKN-LHKV 296 (346)
T ss_dssp CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC-------HHHHHHHHHHS-SCCCCSC-GGGS
T ss_pred cccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC-------HHHHHHHHHcC-CCCCCCc-cccC
Confidence 5667899999999999999999999999999999999999999996321 11222222222 2111111 1112
Q ss_pred HHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCCC
Q 011005 444 ILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTPL 480 (496)
Q Consensus 444 ~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~~ 480 (496)
...+.+|+.+||+.||++|||++|+++|+|+.+..+.
T Consensus 297 s~~~~dli~~~L~~dP~~R~ta~e~l~Hp~~~~~~~p 333 (346)
T 4fih_A 297 SPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPP 333 (346)
T ss_dssp CHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGCCCG
T ss_pred CHHHHHHHHHHcCCChhHCcCHHHHhcCHhhcCCCCC
Confidence 2357799999999999999999999999999876554
No 4
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=4.8e-56 Score=415.55 Aligned_cols=255 Identities=22% Similarity=0.343 Sum_probs=199.1
Q ss_pred hCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccch--hHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEE
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIY 281 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~ 281 (496)
++|++.+.||+|+||+||+|.++ +|+.||+|++.... .....+.+.+|++++++++|||||++++++.+++..++||
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm 92 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence 68999999999999999999764 69999999997543 2233467899999999999999999999999999999999
Q ss_pred EecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCC
Q 011005 282 EYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHAD 361 (496)
Q Consensus 282 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 361 (496)
||+ +|+|.+++.+.. .+++..+..++.||+.||+||| +++|+||||||+|||++.++.+||+|||+|+.....
T Consensus 93 Ey~-~g~L~~~l~~~~---~l~e~~~~~~~~qi~~al~ylH---~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~ 165 (275)
T 3hyh_A 93 EYA-GNELFDYIVQRD---KMSEQEARRFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG 165 (275)
T ss_dssp ECC-CEEHHHHHHHSC---SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCTTTEEECTTCCEEECCSSCC------
T ss_pred eCC-CCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---HCCcccccCChHHeEECCCCCEEEeecCCCeecCCC
Confidence 999 679999987654 6899999999999999999999 779999999999999999999999999999876443
Q ss_pred CCCccccccccccccccccccCCc-CcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhH
Q 011005 362 SSNRTLLAGTYGYIAPELAYTMVM-TEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKV 440 (496)
Q Consensus 362 ~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 440 (496)
. .....+||+.|||||++.+..+ +.++||||+||++|+|++|+.||... ........+.......+..
T Consensus 166 ~-~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~-------~~~~~~~~i~~~~~~~p~~--- 234 (275)
T 3hyh_A 166 N-FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDE-------SIPVLFKNISNGVYTLPKF--- 234 (275)
T ss_dssp ----------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCS-------SHHHHHHHHHHTCCCCCTT---
T ss_pred C-ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCC-------CHHHHHHHHHcCCCCCCCC---
Confidence 2 3345789999999999998886 57999999999999999999999632 1222223333333322211
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCC
Q 011005 441 IRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTP 479 (496)
Q Consensus 441 ~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~ 479 (496)
....+.+|+.+||+.||++|||++|+++|+|++...|
T Consensus 235 --~s~~~~~li~~~L~~dP~~R~s~~eil~hpw~k~~~p 271 (275)
T 3hyh_A 235 --LSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFKVDLP 271 (275)
T ss_dssp --SCHHHHHHHHHHSCSSGGGSCCHHHHHHCHHHHTTCC
T ss_pred --CCHHHHHHHHHHccCChhHCcCHHHHHcCcccccCCC
Confidence 1124678999999999999999999999999976654
No 5
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=5e-56 Score=419.16 Aligned_cols=251 Identities=25% Similarity=0.393 Sum_probs=201.8
Q ss_pred CCcceeeecCCeeEEEEEeC-CCcEEEEEEcccch-hHHHHHHHHHHHHHHHhhcccccccccceeec----CCeEEEEE
Q 011005 208 DIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSE-ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLH----KKCMFLIY 281 (496)
Q Consensus 208 ~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~----~~~~~lV~ 281 (496)
.+.+.||+|+||+||+|.+. +++.||+|++.... .....+.+.+|+.++++++|||||++++++.. +..+++||
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm 108 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence 55678999999999999764 68899999997543 33345778999999999999999999999865 35689999
Q ss_pred EecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCC--eEEeCCCCCceEecC-CCCeEEccccccccc
Q 011005 282 EYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPS--IIHRDISSNNILLNS-KLEAFVADFGTARLL 358 (496)
Q Consensus 282 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~--i~H~dlkp~Nil~~~-~~~~kl~Dfg~~~~~ 358 (496)
|||+||+|.+++.+.. .+++..+..++.||+.||+||| +++ |+||||||+|||++. ++.+||+|||+|+..
T Consensus 109 Ey~~gg~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~ylH---~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~ 182 (290)
T 3fpq_A 109 ELMTSGTLKTYLKRFK---VMKIKVLRSWCRQILKGLQFLH---TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLK 182 (290)
T ss_dssp ECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHH---TSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGC
T ss_pred eCCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---HCCCCEEecccChhheeEECCCCCEEEEeCcCCEeC
Confidence 9999999999998644 6899999999999999999999 556 999999999999984 789999999999864
Q ss_pred cCCCCCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCC-CCCCCC
Q 011005 359 HADSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQR-LPPPVD 437 (496)
Q Consensus 359 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 437 (496)
. .......+||+.|||||++.+ .|+.++|||||||++|||+||+.||.... ........+... .+....
T Consensus 183 ~--~~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~-------~~~~~~~~i~~~~~~~~~~ 252 (290)
T 3fpq_A 183 R--ASFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQ-------NAAQIYRRVTSGVKPASFD 252 (290)
T ss_dssp C--TTSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCS-------SHHHHHHHHTTTCCCGGGG
T ss_pred C--CCccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCC-------cHHHHHHHHHcCCCCCCCC
Confidence 3 233455789999999998865 69999999999999999999999996321 111222222222 221111
Q ss_pred hhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhcc
Q 011005 438 RKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRK 477 (496)
Q Consensus 438 ~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~ 477 (496)
. .....+.+|+.+||+.||++|||++|+++|+|+..+
T Consensus 253 ~---~~~~~~~~li~~~L~~dP~~R~s~~e~l~Hp~~~~~ 289 (290)
T 3fpq_A 253 K---VAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQEE 289 (290)
T ss_dssp G---CCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC--
T ss_pred c---cCCHHHHHHHHHHccCChhHCcCHHHHhcCccccCC
Confidence 1 112247789999999999999999999999999764
No 6
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=4.5e-56 Score=438.07 Aligned_cols=259 Identities=25% Similarity=0.381 Sum_probs=216.6
Q ss_pred hCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEe
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEY 283 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~ 283 (496)
+.|++.+.||+|+||+||+|.++ +|+.||||++...... ..+.+.+|+.+|+.++|||||++++++.+++.+||||||
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~-~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy 229 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ-RRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF 229 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCS-SGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchh-HHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeC
Confidence 56999999999999999999764 6999999999754322 235678999999999999999999999999999999999
Q ss_pred cCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCC
Q 011005 284 MERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSS 363 (496)
Q Consensus 284 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 363 (496)
|+||+|.+++... .+++..+..++.||+.||+||| +++|+||||||+|||++.++.+||+|||+|+.+.....
T Consensus 230 ~~gG~L~~~i~~~----~l~e~~~~~~~~qil~aL~ylH---~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~ 302 (423)
T 4fie_A 230 LEGGALTDIVTHT----RMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP 302 (423)
T ss_dssp CTTEEHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSTTTEEECTTCCEEECCCTTCEECCSSCC
T ss_pred CCCCcHHHHHhcc----CCCHHHHHHHHHHHHHHHHHHH---HCCeecccCCHHHEEEcCCCCEEEecCccceECCCCCc
Confidence 9999999999753 5899999999999999999999 77999999999999999999999999999998866655
Q ss_pred CccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHHHH
Q 011005 364 NRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVIRD 443 (496)
Q Consensus 364 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 443 (496)
.....+||+.|||||++.+..|+.++||||+||++|||++|+.||.... .......+... .+..... ....
T Consensus 303 ~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~-------~~~~~~~i~~~-~~~~~~~-~~~~ 373 (423)
T 4fie_A 303 RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEP-------PLKAMKMIRDN-LPPRLKN-LHKV 373 (423)
T ss_dssp CBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC-------HHHHHHHHHHS-CCCCCSC-TTSS
T ss_pred cccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC-------HHHHHHHHHcC-CCCCCcc-cccC
Confidence 5667899999999999999999999999999999999999999996321 11122222222 1111110 0111
Q ss_pred HHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCCC
Q 011005 444 ILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTPL 480 (496)
Q Consensus 444 ~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~~ 480 (496)
...+.+|+.+||+.||++|||++|+++|+|+.+..+.
T Consensus 374 s~~~~dli~~~L~~dP~~R~ta~ell~Hp~~~~~~~p 410 (423)
T 4fie_A 374 SPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPP 410 (423)
T ss_dssp CHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGCCCG
T ss_pred CHHHHHHHHHHcCCChhHCcCHHHHhcCHHhcCCCCC
Confidence 2247789999999999999999999999999876554
No 7
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=1.1e-55 Score=419.84 Aligned_cols=258 Identities=25% Similarity=0.439 Sum_probs=203.1
Q ss_pred hCCCCcceeeecCCeeEEEEEeCCCcEEEEEEcccch-hHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEe
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSE-ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEY 283 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~ 283 (496)
+++.+.+.||+|+||+||+|.+++ .||||+++... +.+..+.|.+|+.++++++|||||++++++.+ +..+|||||
T Consensus 36 ~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmEy 112 (307)
T 3omv_A 36 SEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQW 112 (307)
T ss_dssp TSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEEC
T ss_pred HHeEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEEc
Confidence 578889999999999999998753 69999987533 34456789999999999999999999998865 457899999
Q ss_pred cCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCC
Q 011005 284 MERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSS 363 (496)
Q Consensus 284 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 363 (496)
|+||+|.+++.... ..+++.+++.|+.||+.||+||| +++|+||||||+|||+++++.+||+|||+|+.......
T Consensus 113 ~~gGsL~~~l~~~~--~~l~~~~~~~i~~qia~gL~yLH---~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~ 187 (307)
T 3omv_A 113 CEGSSLYKHLHVQE--TKFQMFQLIDIARQTAQGMDYLH---AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSG 187 (307)
T ss_dssp CSSCBHHHHHHTSC--CCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCCSSSEEEETTEEEEECCCSSCBC------
T ss_pred CCCCCHHHHHhhcC--CCCCHHHHHHHHHHHHHHHHHHH---HCCccCCccCHHHEEECCCCcEEEeeccCceecccCCc
Confidence 99999999997643 26899999999999999999999 67999999999999999999999999999987643322
Q ss_pred --Ccccccccccccccccccc---CCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCC-CCCCCC
Q 011005 364 --NRTLLAGTYGYIAPELAYT---MVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQR-LPPPVD 437 (496)
Q Consensus 364 --~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 437 (496)
.....+||+.|||||++.+ ..|+.++|||||||++|||+||+.||.... ........+... ..+...
T Consensus 188 ~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~-------~~~~~~~~~~~~~~~p~~~ 260 (307)
T 3omv_A 188 SQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHIN-------NRDQIIFMVGRGYASPDLS 260 (307)
T ss_dssp ------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCC-------CHHHHHHHHHTTCCCCCST
T ss_pred ceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCC-------hHHHHHHHHhcCCCCCCcc
Confidence 2345689999999999864 358999999999999999999999996322 111222222222 121111
Q ss_pred hhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhcc
Q 011005 438 RKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRK 477 (496)
Q Consensus 438 ~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~ 477 (496)
......+..+.+|+.+||+.||++|||+.|+++++...+.
T Consensus 261 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~ 300 (307)
T 3omv_A 261 KLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQH 300 (307)
T ss_dssp TSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHT
T ss_pred cccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhc
Confidence 1111223457899999999999999999999999876543
No 8
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=8.2e-56 Score=422.56 Aligned_cols=256 Identities=23% Similarity=0.351 Sum_probs=208.7
Q ss_pred hCCCCcceeeecCCeeEEEEEeC------CCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEE
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLP------NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMF 278 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 278 (496)
+++++.+.||+|+||+||+|.+. +++.||||+++........+.|.+|+.++++++|||||+++|+|.+++..+
T Consensus 26 ~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~ 105 (308)
T 4gt4_A 26 SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLS 105 (308)
T ss_dssp GGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred HHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEE
Confidence 45667889999999999999863 468899999987654455578999999999999999999999999999999
Q ss_pred EEEEecCCCChhhhhhCCCC-------------CccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCC
Q 011005 279 LIYEYMERGSLFCNLHNNED-------------AVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKL 345 (496)
Q Consensus 279 lV~e~~~~g~L~~~l~~~~~-------------~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~ 345 (496)
+|||||++|+|.+++..... ...+++.+++.|+.||+.||+||| +++|+||||||+|||+++++
T Consensus 106 lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDLK~~NILl~~~~ 182 (308)
T 4gt4_A 106 MIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLS---SHHVVHKDLATRNVLVYDKL 182 (308)
T ss_dssp EEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGG
T ss_pred EEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHH---hCCCCCCCccccceEECCCC
Confidence 99999999999999975421 235899999999999999999999 67999999999999999999
Q ss_pred CeEEccccccccccCCCC--CccccccccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccCCCCCCcc
Q 011005 346 EAFVADFGTARLLHADSS--NRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSSDPKI 422 (496)
Q Consensus 346 ~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~~~~~ 422 (496)
.+||+|||+++....... .....+||+.|||||++.+..|+.++|||||||++|||+| |+.||.... ...
T Consensus 183 ~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~-------~~~ 255 (308)
T 4gt4_A 183 NVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYS-------NQD 255 (308)
T ss_dssp CEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCC-------HHH
T ss_pred CEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCC-------HHH
Confidence 999999999987644322 2344679999999999999999999999999999999998 899996332 122
Q ss_pred hhHhhhcCCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHH
Q 011005 423 MLIDVLDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLI 474 (496)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~ 474 (496)
....+......+ .... .+..+.+|+.+||+.||++|||+.||++++.-
T Consensus 256 ~~~~i~~~~~~~-~p~~---~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a 303 (308)
T 4gt4_A 256 VVEMIRNRQVLP-CPDD---CPAWVYALMIECWNEFPSRRPRFKDIHSRLRA 303 (308)
T ss_dssp HHHHHHTTCCCC-CCTT---CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred HHHHHHcCCCCC-Cccc---chHHHHHHHHHHcCCChhHCcCHHHHHHHHHh
Confidence 222222222222 1111 22357799999999999999999999999854
No 9
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=4.6e-55 Score=421.33 Aligned_cols=259 Identities=24% Similarity=0.432 Sum_probs=206.2
Q ss_pred hCCCCcceeeecCCeeEEEEEeC------CCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEE
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLP------NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMF 278 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 278 (496)
++|.+.+.||+|+||+||+|.++ +++.||||+++... ....+.|.+|++++++++|||||+++++|.+++..+
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~ 119 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEAS-ESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLL 119 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCS-HHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEE
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCC-HHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEE
Confidence 46778889999999999999864 47889999997654 344578999999999999999999999999999999
Q ss_pred EEEEecCCCChhhhhhCCCC------------CccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCC
Q 011005 279 LIYEYMERGSLFCNLHNNED------------AVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLE 346 (496)
Q Consensus 279 lV~e~~~~g~L~~~l~~~~~------------~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~ 346 (496)
+|||||++|+|.++++.... ...+++.+++.|+.||+.||+||| +++|+||||||+|||+++++.
T Consensus 120 lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDLKp~NILl~~~~~ 196 (329)
T 4aoj_A 120 MVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLA---GLHFVHRDLATRNCLVGQGLV 196 (329)
T ss_dssp EEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEETTTE
T ss_pred EEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHh---cCCeecccccHhhEEECCCCc
Confidence 99999999999999976432 235899999999999999999999 679999999999999999999
Q ss_pred eEEccccccccccCCCC--CccccccccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccCCCCCCcch
Q 011005 347 AFVADFGTARLLHADSS--NRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSSDPKIM 423 (496)
Q Consensus 347 ~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~~~~~~ 423 (496)
+||+|||+|+....... .....+||+.|||||++.+..|+.++|||||||++|||+| |+.||.... ....
T Consensus 197 ~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~-------~~~~ 269 (329)
T 4aoj_A 197 VKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLS-------NTEA 269 (329)
T ss_dssp EEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSC-------HHHH
T ss_pred EEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCC-------HHHH
Confidence 99999999987644332 2234679999999999999999999999999999999999 899996332 1222
Q ss_pred hHhhhcCC-CCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCC
Q 011005 424 LIDVLDQR-LPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTP 479 (496)
Q Consensus 424 ~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~ 479 (496)
...+.... ++.+.. .+..+.+|+.+||+.||++|||++||++++....+.|
T Consensus 270 ~~~i~~g~~~~~p~~-----~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~p 321 (329)
T 4aoj_A 270 IDCITQGRELERPRA-----CPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQAP 321 (329)
T ss_dssp HHHHHHTCCCCCCTT-----CCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHSC
T ss_pred HHHHHcCCCCCCccc-----ccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhCC
Confidence 22222222 222111 1235779999999999999999999999998776654
No 10
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=1.3e-55 Score=419.28 Aligned_cols=258 Identities=25% Similarity=0.420 Sum_probs=209.8
Q ss_pred hCCCCcceeeecCCeeEEEEEeC------CCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEE
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLP------NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMF 278 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 278 (496)
++|.+.+.||+|+||+||+|.+. +++.||||+++.... ...+.|.+|++++++++|||||+++|+|.+++..+
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~-~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~ 91 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASD-NARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLI 91 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCH-HHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEE
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCCh-HHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEE
Confidence 56888999999999999999764 478899999986543 34578999999999999999999999999999999
Q ss_pred EEEEecCCCChhhhhhCCC----------CCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeE
Q 011005 279 LIYEYMERGSLFCNLHNNE----------DAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAF 348 (496)
Q Consensus 279 lV~e~~~~g~L~~~l~~~~----------~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~k 348 (496)
+|||||++|+|.+++.... ....+++.+++.|+.||+.||+||| +++|+||||||+|||++.++.+|
T Consensus 92 lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDlKp~NILl~~~~~~K 168 (299)
T 4asz_A 92 MVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLA---SQHFVHRDLATRNCLVGENLLVK 168 (299)
T ss_dssp EEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEE
T ss_pred EEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCccCHhhEEECCCCcEE
Confidence 9999999999999997542 2346999999999999999999999 67999999999999999999999
Q ss_pred EccccccccccCCCCC--ccccccccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccCCCCCCcchhH
Q 011005 349 VADFGTARLLHADSSN--RTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSSDPKIMLI 425 (496)
Q Consensus 349 l~Dfg~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~ 425 (496)
|+|||+|+........ .....||+.|||||++.+..|+.++|||||||++|||+| |+.||.... ......
T Consensus 169 i~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~-------~~~~~~ 241 (299)
T 4asz_A 169 IGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLS-------NNEVIE 241 (299)
T ss_dssp ECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSC-------HHHHHH
T ss_pred ECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCC-------HHHHHH
Confidence 9999999876443322 223468999999999999999999999999999999998 899996432 222233
Q ss_pred hhhcCCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhcc
Q 011005 426 DVLDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRK 477 (496)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~ 477 (496)
.+.....+..... .+..+.+|+.+||+.||++|||++|+.+.+....+
T Consensus 242 ~i~~~~~~~~p~~----~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~ 289 (299)
T 4asz_A 242 CITQGRVLQRPRT----CPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAK 289 (299)
T ss_dssp HHHHTCCCCCCTT----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHcCCCCCCCcc----chHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence 3333332221111 12357799999999999999999999887765443
No 11
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=2.3e-56 Score=423.48 Aligned_cols=254 Identities=25% Similarity=0.349 Sum_probs=205.0
Q ss_pred hCCCCcceeeecCCeeEEEEEeC----CCcEEEEEEcccch-hHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEE
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLP----NGKVFALKKLHTSE-ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFL 279 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 279 (496)
++|++.+.||+|+||+||+|+.. .++.||+|+++... .......+.+|++++++++|||||++++++.+++..++
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i 103 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL 103 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 57999999999999999999752 47899999997542 11122457889999999999999999999999999999
Q ss_pred EEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEcccccccccc
Q 011005 280 IYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLH 359 (496)
Q Consensus 280 V~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 359 (496)
|||||+||+|.+++.+.. .+++.++..++.||+.||+||| +++|+||||||+|||++.++.+||+|||+|+...
T Consensus 104 vmEy~~gg~L~~~l~~~~---~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~ 177 (304)
T 3ubd_A 104 ILDFLRGGDLFTRLSKEV---MFTEEDVKFYLAELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESI 177 (304)
T ss_dssp EECCCTTCEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECTTSCEEEESSEEEEC--
T ss_pred EEEcCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHeEEcCCCCEEecccccceecc
Confidence 999999999999998654 6899999999999999999999 7799999999999999999999999999998765
Q ss_pred CCCCCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChh
Q 011005 360 ADSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRK 439 (496)
Q Consensus 360 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 439 (496)
.........+||+.|||||++.+..|+.++||||+||++|||++|+.||... ........+.......+..
T Consensus 178 ~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~-------~~~~~~~~i~~~~~~~p~~-- 248 (304)
T 3ubd_A 178 DHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGK-------DRKETMTMILKAKLGMPQF-- 248 (304)
T ss_dssp ---CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCS-------SHHHHHHHHHHCCCCCCTT--
T ss_pred CCCccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCc-------CHHHHHHHHHcCCCCCCCc--
Confidence 5555556678999999999999999999999999999999999999999632 2222333344443332211
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCC-----HHHHHHHHHHhc
Q 011005 440 VIRDILLISTVSFACLQSNPKSRPT-----MQSVSQEFLITR 476 (496)
Q Consensus 440 ~~~~~~~l~~li~~cl~~dP~~Rps-----~~evl~~~~~~~ 476 (496)
....+.+|+.+||+.||++||| ++|+++|+|+..
T Consensus 249 ---~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~Hp~f~~ 287 (304)
T 3ubd_A 249 ---LSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFST 287 (304)
T ss_dssp ---SCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHTSGGGTT
T ss_pred ---CCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHcCccccC
Confidence 1224678999999999999998 579999998743
No 12
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=8.4e-55 Score=417.63 Aligned_cols=265 Identities=22% Similarity=0.240 Sum_probs=210.5
Q ss_pred hCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEe
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEY 283 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~ 283 (496)
+.|++.++||+|+||+||+|.++ +|+.||||+++.... ..+|+.+++.++|||||++++++.+++.+||||||
T Consensus 58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~------~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy 131 (336)
T 4g3f_A 58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF------RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMEL 131 (336)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC------CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh------HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEec
Confidence 46778889999999999999764 699999999975431 24799999999999999999999999999999999
Q ss_pred cCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCC-CeEEccccccccccCCC
Q 011005 284 MERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKL-EAFVADFGTARLLHADS 362 (496)
Q Consensus 284 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~-~~kl~Dfg~~~~~~~~~ 362 (496)
|+||+|.+++.... .+++..+..++.||+.||+||| +++|+||||||+|||++.++ .+||+|||+|+.+....
T Consensus 132 ~~gg~L~~~l~~~~---~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~ 205 (336)
T 4g3f_A 132 LEGGSLGQLIKQMG---CLPEDRALYYLGQALEGLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDG 205 (336)
T ss_dssp CTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC----
T ss_pred cCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---HCCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCC
Confidence 99999999998654 6899999999999999999999 78999999999999999987 69999999998775432
Q ss_pred CC-----ccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCC
Q 011005 363 SN-----RTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVD 437 (496)
Q Consensus 363 ~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (496)
.. ....+||+.|||||++.+..|+.++||||+||++|||++|+.||.... .......+.....+..
T Consensus 206 ~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~-------~~~~~~~i~~~~~~~~-- 276 (336)
T 4g3f_A 206 LGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYF-------RGPLCLKIASEPPPIR-- 276 (336)
T ss_dssp --------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTC-------CSCCHHHHHHSCCGGG--
T ss_pred cccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCC-------HHHHHHHHHcCCCCch--
Confidence 21 233579999999999999999999999999999999999999996322 1222233333222110
Q ss_pred hhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhcc-CCCCCcccccccc
Q 011005 438 RKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRK-TPLVKHAAIQDIS 490 (496)
Q Consensus 438 ~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~-~~~~~~~~~~~i~ 490 (496)
..+......+.+++.+||+.||++|||+.|+++++...-. .....+++++++.
T Consensus 277 ~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~~~l~hPw~~~~~ 330 (336)
T 4g3f_A 277 EIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEVGGLKSPWKGEYK 330 (336)
T ss_dssp GSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTTSSCSCSSSSCC
T ss_pred hcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhhhhccCCCcCCCC
Confidence 0011112347789999999999999999999999765433 2334556665543
No 13
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=1.4e-54 Score=413.10 Aligned_cols=257 Identities=22% Similarity=0.376 Sum_probs=199.9
Q ss_pred HhCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCC-------
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKK------- 275 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~------- 275 (496)
.++|++.+.||+|+||+||+|.++ +|+.||||+++........+.+.+|+.++++++|||||++++++.+.+
T Consensus 4 l~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~ 83 (299)
T 4g31_A 4 LTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQP 83 (299)
T ss_dssp HHHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC-------
T ss_pred chhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccc
Confidence 356999999999999999999764 789999999976655555678899999999999999999999987544
Q ss_pred -----eEEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEc
Q 011005 276 -----CMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVA 350 (496)
Q Consensus 276 -----~~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~ 350 (496)
..|+|||||++|+|.+++.........++..++.++.||+.||+||| +++|+||||||+|||++.++.+||+
T Consensus 84 ~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH---~~~IiHRDlKp~NILl~~~~~vKl~ 160 (299)
T 4g31_A 84 SSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVG 160 (299)
T ss_dssp ---CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEEC
T ss_pred cCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHH---HCcCccccCcHHHeEECCCCcEEEc
Confidence 37899999999999999987765556777888999999999999999 7799999999999999999999999
Q ss_pred cccccccccCCCCC------------ccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCC
Q 011005 351 DFGTARLLHADSSN------------RTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSS 418 (496)
Q Consensus 351 Dfg~~~~~~~~~~~------------~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~ 418 (496)
|||+|+........ ....+||+.|||||++.+..|+.++||||+||++|||++ ||....
T Consensus 161 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~------ 231 (299)
T 4g31_A 161 DFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQM------ 231 (299)
T ss_dssp CCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHH------
T ss_pred cCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCcc------
Confidence 99999877543221 233579999999999999999999999999999999996 664211
Q ss_pred CCcchhHhhhcCCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhc
Q 011005 419 DPKIMLIDVLDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITR 476 (496)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~ 476 (496)
..............+ ...........+|+.+||+.||++|||+.|+++|+|+..
T Consensus 232 ~~~~~~~~~~~~~~p----~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~ 285 (299)
T 4g31_A 232 ERVRTLTDVRNLKFP----PLFTQKYPCEYVMVQDMLSPSPMERPEAINIIENAVFED 285 (299)
T ss_dssp HHHHHHHHHHTTCCC----HHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGCC
T ss_pred HHHHHHHHHhcCCCC----CCCcccCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhCC
Confidence 011111222222222 122223334678999999999999999999999999854
No 14
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=9.9e-54 Score=415.27 Aligned_cols=260 Identities=24% Similarity=0.355 Sum_probs=210.7
Q ss_pred HHHHhCCCCcceeeecCCeeEEEEEeCC------CcEEEEEEcccchhHHHHHHHHHHHHHHHhhcc-cccccccceeec
Q 011005 201 IEATEDFDIRYCIGTGGYGSVYKAQLPN------GKVFALKKLHTSEELAFIKSFKNEAQVLSQVLH-RNIVKLYGYCLH 273 (496)
Q Consensus 201 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h-~niv~~~~~~~~ 273 (496)
+...++|++.+.||+|+||+||+|.+.. ++.||||++.........+.+.+|++++++++| ||||+++|+|.+
T Consensus 60 Ei~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~ 139 (353)
T 4ase_A 60 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTK 139 (353)
T ss_dssp BCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECC
T ss_pred EecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEe
Confidence 3345789999999999999999997542 468999999876655556789999999999975 899999999876
Q ss_pred C-CeEEEEEEecCCCChhhhhhCCCC-------------CccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCce
Q 011005 274 K-KCMFLIYEYMERGSLFCNLHNNED-------------AVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNI 339 (496)
Q Consensus 274 ~-~~~~lV~e~~~~g~L~~~l~~~~~-------------~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Ni 339 (496)
. +.+++|||||++|+|.++++.... ...+++..++.++.||+.||+||| +++|+||||||+||
T Consensus 140 ~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH---~~~iiHRDLK~~NI 216 (353)
T 4ase_A 140 PGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNI 216 (353)
T ss_dssp TTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGE
T ss_pred cCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHh---hCCeecCccCccce
Confidence 4 568999999999999999975321 235899999999999999999999 77999999999999
Q ss_pred EecCCCCeEEccccccccccCCCCC--ccccccccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccCC
Q 011005 340 LLNSKLEAFVADFGTARLLHADSSN--RTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSS 416 (496)
Q Consensus 340 l~~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~ 416 (496)
|+++++.+||+|||+|+........ ....+||+.|||||++.+..|+.++|||||||++|||+| |+.||....
T Consensus 217 Ll~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~---- 292 (353)
T 4ase_A 217 LLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK---- 292 (353)
T ss_dssp EECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC----
T ss_pred eeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCC----
Confidence 9999999999999999876544332 334678999999999999999999999999999999998 999996322
Q ss_pred CCCCcchhHhhh-cC-CCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHh
Q 011005 417 SSDPKIMLIDVL-DQ-RLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLIT 475 (496)
Q Consensus 417 ~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~ 475 (496)
........+ .. +++.+.. ....+.+++.+||+.||++|||+.|+++|+...
T Consensus 293 ---~~~~~~~~i~~g~~~~~p~~-----~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~l 345 (353)
T 4ase_A 293 ---IDEEFCRRLKEGTRMRAPDY-----TTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 345 (353)
T ss_dssp ---CSHHHHHHHHHTCCCCCCTT-----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred ---HHHHHHHHHHcCCCCCCCcc-----CCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHH
Confidence 112222222 22 2222211 123477899999999999999999999998654
No 15
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=7e-53 Score=403.31 Aligned_cols=267 Identities=23% Similarity=0.330 Sum_probs=203.0
Q ss_pred hCCCCcceeeecCCeeEEEEEeCCCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCC----eEEEE
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKK----CMFLI 280 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~----~~~lV 280 (496)
.+|.+.+.||+|+||+||+|.+ +|+.||||++....... .....|+..+.+++|||||++++++.+++ .++||
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~~~~--~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV 79 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERS--WFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLV 79 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGGHHH--HHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccchhh--HHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEE
Confidence 4577889999999999999998 58999999997654322 22345666667889999999999998653 58999
Q ss_pred EEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhC-----CCCCeEEeCCCCCceEecCCCCeEEcccccc
Q 011005 281 YEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHD-----CSPSIIHRDISSNNILLNSKLEAFVADFGTA 355 (496)
Q Consensus 281 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~-----~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~ 355 (496)
||||++|+|.++++.. .+++..+.+++.|++.||+|||+. +..+|+||||||+|||++.++++||+|||+|
T Consensus 80 ~Ey~~~gsL~~~l~~~----~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla 155 (303)
T 3hmm_A 80 SDYHEHGSLFDYLNRY----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 155 (303)
T ss_dssp EECCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTC
T ss_pred ecCCCCCcHHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCC
Confidence 9999999999999864 589999999999999999999943 1239999999999999999999999999999
Q ss_pred ccccCCCCC----ccccccccccccccccccC------CcCcccchhhHHHHHHHHHhCCCCCccccccCCCC-------
Q 011005 356 RLLHADSSN----RTLLAGTYGYIAPELAYTM------VMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSS------- 418 (496)
Q Consensus 356 ~~~~~~~~~----~~~~~gt~~y~aPE~~~~~------~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~------- 418 (496)
+........ ....+||+.|||||++.+. .++.++|||||||++|||+||+.|+..........
T Consensus 156 ~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~ 235 (303)
T 3hmm_A 156 VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSD 235 (303)
T ss_dssp EEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSS
T ss_pred ccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhccccc
Confidence 877544322 2235799999999998764 46789999999999999999998875433211110
Q ss_pred -CCcchhHhhhcCCCCCCCChh--HHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccC
Q 011005 419 -DPKIMLIDVLDQRLPPPVDRK--VIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKT 478 (496)
Q Consensus 419 -~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~ 478 (496)
...............+..... .......+.+|+.+||+.||++|||+.|+++.+....+.
T Consensus 236 ~~~~~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~ 298 (303)
T 3hmm_A 236 PSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 298 (303)
T ss_dssp CCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred chHHHHHHHHhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHH
Confidence 011112222333333332221 223445678999999999999999999999998766543
No 16
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.9e-51 Score=406.22 Aligned_cols=267 Identities=23% Similarity=0.325 Sum_probs=205.4
Q ss_pred hCCCCcceeeecCCeeEEEEEe-CCCcEEEEEEcccch-hHHHHHHHHHHHHHHHhhcccccccccceeec------CCe
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSE-ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLH------KKC 276 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~------~~~ 276 (496)
++|++.+.||+|+||+||+|.+ .+|+.||||+++... .....+.+.+|+++|+.++|||||++++++.. .+.
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~ 133 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS 133 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence 5799999999999999999976 479999999997643 23345678899999999999999999998754 357
Q ss_pred EEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccc
Q 011005 277 MFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTAR 356 (496)
Q Consensus 277 ~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~ 356 (496)
+|+|||||+ |+|.+++.... .+++..+..++.||+.||.||| ++||+||||||+|||++.++.+||+|||+|+
T Consensus 134 ~~ivmE~~~-g~L~~~i~~~~---~l~~~~~~~~~~qil~al~ylH---~~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~ 206 (398)
T 4b99_A 134 VYVVLDLME-SDLHQIIHSSQ---PLTLEHVRYFLYQLLRGLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMAR 206 (398)
T ss_dssp EEEEEECCS-EEHHHHHTSSS---CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTCCEEECCCTTCB
T ss_pred EEEEEeCCC-CCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---HCcCcCCCcCccccccCCCCCEEEeecceee
Confidence 899999996 67999997654 7999999999999999999999 7899999999999999999999999999998
Q ss_pred cccCCC----CCccccccccccccccccccC-CcCcccchhhHHHHHHHHHhCCCCCccccccC---------CCCCC--
Q 011005 357 LLHADS----SNRTLLAGTYGYIAPELAYTM-VMTEKCDVYSFGVVTLEVLMGKHPRDILSSLS---------SSSDP-- 420 (496)
Q Consensus 357 ~~~~~~----~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~el~~g~~p~~~~~~~~---------~~~~~-- 420 (496)
.+.... ......+||+.|||||++.+. .++.++||||+||++|||++|++||...+... .....
T Consensus 207 ~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~~ 286 (398)
T 4b99_A 207 GLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAV 286 (398)
T ss_dssp CC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGGG
T ss_pred ecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChHH
Confidence 764322 223457899999999998875 46899999999999999999999996432100 00000
Q ss_pred -----cchhHhhhc---CCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccC
Q 011005 421 -----KIMLIDVLD---QRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKT 478 (496)
Q Consensus 421 -----~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~ 478 (496)
......... ...+.+...........+.+|+.+||..||++|||++|+++|+|+....
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~ 352 (398)
T 4b99_A 287 IQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFLAKYH 352 (398)
T ss_dssp TC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTSGGGTTTC
T ss_pred hhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcCHhhCcCC
Confidence 000000000 1111110000001123467899999999999999999999999998653
No 17
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=2.4e-50 Score=394.22 Aligned_cols=264 Identities=25% Similarity=0.260 Sum_probs=201.2
Q ss_pred HHHHhCCCCcceeeecCCeeEEEEEeC----CCcEEEEEEcccchhHHHHHHHHHHHHHHHhh-cccccccccceeecCC
Q 011005 201 IEATEDFDIRYCIGTGGYGSVYKAQLP----NGKVFALKKLHTSEELAFIKSFKNEAQVLSQV-LHRNIVKLYGYCLHKK 275 (496)
Q Consensus 201 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~ 275 (496)
.+..++|++.+.||+|+||+||+|..+ .++.||+|++..... ...+.+|+++++.+ +||||+++++++.+++
T Consensus 17 p~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~---~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~ 93 (361)
T 4f9c_A 17 PQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSH---PIRIAAELQCLTVAGGQDNVMGVKYCFRKND 93 (361)
T ss_dssp GGGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTSC---HHHHHHHHHHHHHTCSBTTBCCCSEEEEETT
T ss_pred CCccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccccC---HHHHHHHHHHHHHhcCCCCCceEEEEEEECC
Confidence 345678999999999999999999653 468899999876543 24578999999998 6999999999999999
Q ss_pred eEEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCC-CCeEEccccc
Q 011005 276 CMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSK-LEAFVADFGT 354 (496)
Q Consensus 276 ~~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~-~~~kl~Dfg~ 354 (496)
+.++||||++||+|.+++. .+++.++..++.||+.||+||| ++||+||||||+|||++.+ +.+||+|||+
T Consensus 94 ~~~lvmE~~~g~~L~~~~~------~l~~~~~~~~~~qll~al~ylH---~~gIiHRDiKPeNiLl~~~~~~~kl~DFGl 164 (361)
T 4f9c_A 94 HVVIAMPYLEHESFLDILN------SLSFQEVREYMLNLFKALKRIH---QFGIVHRDVKPSNFLYNRRLKKYALVDFGL 164 (361)
T ss_dssp EEEEEEECCCCCCHHHHHT------TCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEETTTTEEEECCCTT
T ss_pred EEEEEEeCCCcccHHHHHc------CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCcCCHHHeEEeCCCCeEEECcCCC
Confidence 9999999999999999984 4789999999999999999999 7899999999999999877 7999999999
Q ss_pred cccccCCCC----------------------------CccccccccccccccccccC-CcCcccchhhHHHHHHHHHhCC
Q 011005 355 ARLLHADSS----------------------------NRTLLAGTYGYIAPELAYTM-VMTEKCDVYSFGVVTLEVLMGK 405 (496)
Q Consensus 355 ~~~~~~~~~----------------------------~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~el~~g~ 405 (496)
|+....... .....+||+.|+|||++.+. .|+.++||||+||++|||++|+
T Consensus 165 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~ 244 (361)
T 4f9c_A 165 AQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGR 244 (361)
T ss_dssp CEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTC
T ss_pred CcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCC
Confidence 976543211 12235799999999999875 5899999999999999999999
Q ss_pred CCCccccccC----------------------------CCCCCcch---hHhhhc---CCCCCCCC---------hhHHH
Q 011005 406 HPRDILSSLS----------------------------SSSDPKIM---LIDVLD---QRLPPPVD---------RKVIR 442 (496)
Q Consensus 406 ~p~~~~~~~~----------------------------~~~~~~~~---~~~~~~---~~~~~~~~---------~~~~~ 442 (496)
.||....... ....+... ..+... ...+.... .....
T Consensus 245 ~Pf~~~~~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 324 (361)
T 4f9c_A 245 YPFYKASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEGWNE 324 (361)
T ss_dssp SSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC----------------------CTT
T ss_pred CCCCCCCCHHHHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhcccccccccccccccccccccccccc
Confidence 9994321100 00000000 000000 00000000 00000
Q ss_pred HHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhc
Q 011005 443 DILLISTVSFACLQSNPKSRPTMQSVSQEFLITR 476 (496)
Q Consensus 443 ~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~ 476 (496)
....+.+|+.+||+.||++|||++|+++|+|+..
T Consensus 325 is~~a~DLl~~lL~~dP~~R~ta~eaL~Hp~f~~ 358 (361)
T 4f9c_A 325 VPDEAYDLLDKLLDLNPASRITAEEALLHPFFKD 358 (361)
T ss_dssp CCHHHHHHHHHHTCSCTTTSCCHHHHHTSGGGTT
T ss_pred CCHHHHHHHHHHCcCChhHCcCHHHHhcCcccCC
Confidence 1124679999999999999999999999999853
No 18
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=3.5e-49 Score=408.80 Aligned_cols=261 Identities=23% Similarity=0.303 Sum_probs=214.7
Q ss_pred HhCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEE
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYE 282 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e 282 (496)
.++|++.+.||+|+||+||+|.++ +|+.||+|.+..... ...+.+.+|+.+|+.++|||||++++++.+++.+++|||
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~-~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E 234 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHE-SDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYE 234 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSH-HHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEE
T ss_pred ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccch-hhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEe
Confidence 368999999999999999999764 799999999876543 234678899999999999999999999999999999999
Q ss_pred ecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCC--CCeEEccccccccccC
Q 011005 283 YMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSK--LEAFVADFGTARLLHA 360 (496)
Q Consensus 283 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~--~~~kl~Dfg~~~~~~~ 360 (496)
||+||+|.+++.... ..+++.++..++.||+.||+||| +++|+||||||+|||++.+ +.+||+|||+|+.+..
T Consensus 235 ~~~gg~L~~~i~~~~--~~l~e~~~~~~~~qi~~al~ylH---~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~ 309 (573)
T 3uto_A 235 FMSGGELFEKVADEH--NKMSEDEAVEYMRQVCKGLCHMH---ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDP 309 (573)
T ss_dssp CCCCCBHHHHHTCTT--SCEEHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCT
T ss_pred ecCCCcHHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCChhhccccCCCCCCEEEeeccceeEccC
Confidence 999999999987532 26899999999999999999999 7799999999999999854 8999999999988754
Q ss_pred CCCCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhH
Q 011005 361 DSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKV 440 (496)
Q Consensus 361 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 440 (496)
. ......+||+.|||||++.+..|+.++||||+||++|||++|+.||.... .......+.......+. ...
T Consensus 310 ~-~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~-------~~~~~~~i~~~~~~~~~-~~~ 380 (573)
T 3uto_A 310 K-QSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGEN-------DDETLRNVKSCDWNMDD-SAF 380 (573)
T ss_dssp T-SEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSS-------HHHHHHHHHTTCCCCCS-GGG
T ss_pred C-CceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC-------HHHHHHHHHhCCCCCCc-ccc
Confidence 3 33445689999999999999999999999999999999999999996322 22222333322222111 111
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCC
Q 011005 441 IRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTP 479 (496)
Q Consensus 441 ~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~ 479 (496)
......+.+|+.+||+.||++|||+.|+++|+|+.....
T Consensus 381 ~~~s~~~~dli~~~L~~dp~~R~t~~e~l~Hpw~~~~~~ 419 (573)
T 3uto_A 381 SGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNA 419 (573)
T ss_dssp TTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTTSCCCC
T ss_pred cCCCHHHHHHHHHHccCChhHCcCHHHHhcCcCcCCCCC
Confidence 111234678999999999999999999999999976543
No 19
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=4.5e-49 Score=405.18 Aligned_cols=255 Identities=22% Similarity=0.256 Sum_probs=205.4
Q ss_pred hCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchh--HHHHHHHH---HHHHHHHhhcccccccccceeecCCeEE
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEE--LAFIKSFK---NEAQVLSQVLHRNIVKLYGYCLHKKCMF 278 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~---~e~~~l~~l~h~niv~~~~~~~~~~~~~ 278 (496)
++|++.+.||+|+||+||+|..+ +|+.||+|++.+..- ........ +++.+++.++|||||++++++.+++.+|
T Consensus 189 ddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~ly 268 (689)
T 3v5w_A 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS 268 (689)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEE
T ss_pred HHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEE
Confidence 67999999999999999999765 699999999975421 11112233 3456666778999999999999999999
Q ss_pred EEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccc
Q 011005 279 LIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLL 358 (496)
Q Consensus 279 lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 358 (496)
+|||||+||+|.+++.+.. .+++..+..++.||+.||+||| ++||+||||||+|||++.+|++||+|||+|+.+
T Consensus 269 lVmEy~~GGdL~~~l~~~~---~l~E~~a~~y~~qIl~aL~yLH---~~gIiHRDLKPeNILld~~G~vKL~DFGlA~~~ 342 (689)
T 3v5w_A 269 FILDLMNGGDLHYHLSQHG---VFSEADMRFYAAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDF 342 (689)
T ss_dssp EEECCCCSCBHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEEecCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCchHHeEEeCCCCEEecccceeeec
Confidence 9999999999999998654 6899999999999999999999 889999999999999999999999999999877
Q ss_pred cCCCCCcccccccccccccccccc-CCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCC
Q 011005 359 HADSSNRTLLAGTYGYIAPELAYT-MVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVD 437 (496)
Q Consensus 359 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (496)
... .....+||+.|||||++.+ ..|+.++||||+||++|||++|++||..... .................+..
T Consensus 343 ~~~--~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~----~~~~~i~~~i~~~~~~~p~~ 416 (689)
T 3v5w_A 343 SKK--KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKT----KDKHEIDRMTLTMAVELPDS 416 (689)
T ss_dssp SSC--CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGC----CCHHHHHHHHHHCCCCCCTT
T ss_pred CCC--CCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCh----HHHHHHHHhhcCCCCCCCcc
Confidence 543 2345689999999999974 5799999999999999999999999964321 11111222222332222211
Q ss_pred hhHHHHHHHHHHHHHhcccCCCCCCCC-----HHHHHHHHHHhc
Q 011005 438 RKVIRDILLISTVSFACLQSNPKSRPT-----MQSVSQEFLITR 476 (496)
Q Consensus 438 ~~~~~~~~~l~~li~~cl~~dP~~Rps-----~~evl~~~~~~~ 476 (496)
....+.+|+.+||+.||++|++ ++|+++|+|+..
T Consensus 417 -----~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~HpfF~~ 455 (689)
T 3v5w_A 417 -----FSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRS 455 (689)
T ss_dssp -----SCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTSGGGTT
T ss_pred -----CCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhcCccccC
Confidence 1124678999999999999998 799999999864
No 20
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=4.9e-47 Score=363.56 Aligned_cols=261 Identities=24% Similarity=0.357 Sum_probs=215.8
Q ss_pred HhCCCCcceeeecCCeeEEEEEe-CCCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEE
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYE 282 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e 282 (496)
.++|++.+.||+|+||+||+|.+ .+++.||+|.+...... ..+.+.+|+.+++.++||||+++++++..++..++|||
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 97 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQP-KKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVME 97 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCS-CHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeeccccc-HHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEE
Confidence 46899999999999999999975 57899999998754422 23568899999999999999999999999999999999
Q ss_pred ecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCC
Q 011005 283 YMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADS 362 (496)
Q Consensus 283 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 362 (496)
|+++|+|.+++... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++.......
T Consensus 98 ~~~~~~L~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 170 (297)
T 3fxz_A 98 YLAGGSLTDVVTET----CMDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ 170 (297)
T ss_dssp CCTTCBHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred CCCCCCHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHH---hCCceeCCCCHHHEEECCCCCEEEeeCCCceecCCcc
Confidence 99999999999764 5889999999999999999999 6799999999999999999999999999998876655
Q ss_pred CCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHHH
Q 011005 363 SNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVIR 442 (496)
Q Consensus 363 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (496)
.......||+.|+|||++.+..++.++||||+|+++|+|++|+.||..... ............+.... ...
T Consensus 171 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-------~~~~~~~~~~~~~~~~~--~~~ 241 (297)
T 3fxz_A 171 SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENP-------LRALYLIATNGTPELQN--PEK 241 (297)
T ss_dssp CCBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH-------HHHHHHHHHHCSCCCSC--GGG
T ss_pred cccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH-------HHHHHHHHhCCCCCCCC--ccc
Confidence 555667899999999999999999999999999999999999999963221 11111111111111100 011
Q ss_pred HHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCCCC
Q 011005 443 DILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTPLV 481 (496)
Q Consensus 443 ~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~~~ 481 (496)
....+.+++.+||+.||++|||++|+++|+|+....+..
T Consensus 242 ~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~~~~ 280 (297)
T 3fxz_A 242 LSAIFRDFLNRCLEMDVEKRGSAKELLQHQFLKIAKPLS 280 (297)
T ss_dssp SCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGCCCGG
T ss_pred cCHHHHHHHHHHccCChhHCcCHHHHhhChhhcccCccc
Confidence 123477899999999999999999999999998776553
No 21
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=7.7e-47 Score=366.66 Aligned_cols=256 Identities=24% Similarity=0.363 Sum_probs=214.4
Q ss_pred HhCCCCcceeeecCCeeEEEEEe-CCCcEEEEEEcccch-hHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEE
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSE-ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIY 281 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~ 281 (496)
.++|++.+.||+|+||.||+|.+ .+|+.||||++.... .....+.+.+|+.+++.++||||+++++++...+..++||
T Consensus 14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 93 (328)
T 3fe3_A 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIM 93 (328)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence 46799999999999999999976 579999999997643 3344567889999999999999999999999999999999
Q ss_pred EecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCC
Q 011005 282 EYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHAD 361 (496)
Q Consensus 282 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 361 (496)
||+++|+|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++......
T Consensus 94 e~~~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~al~~lH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~ 167 (328)
T 3fe3_A 94 EYASGGEVFDYLVAHG---RMKEKEARSKFRQIVSAVQYCH---QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVG 167 (328)
T ss_dssp CCCTTCBHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSS
T ss_pred ECCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---HCCEeccCCCHHHEEEcCCCCEEEeeccCceecCCC
Confidence 9999999999997654 6899999999999999999999 779999999999999999999999999999876543
Q ss_pred CCCccccccccccccccccccCCcC-cccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhH
Q 011005 362 SSNRTLLAGTYGYIAPELAYTMVMT-EKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKV 440 (496)
Q Consensus 362 ~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 440 (496)
......+||+.|+|||++.+..++ .++||||+|+++|+|++|+.||.... ...............+..
T Consensus 168 -~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~-------~~~~~~~i~~~~~~~p~~--- 236 (328)
T 3fe3_A 168 -GKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN-------LKELRERVLRGKYRIPFY--- 236 (328)
T ss_dssp -CGGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSS-------HHHHHHHHHHCCCCCCTT---
T ss_pred -CccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCC-------HHHHHHHHHhCCCCCCCC---
Confidence 334556899999999999988875 79999999999999999999996321 222233333333322211
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccC
Q 011005 441 IRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKT 478 (496)
Q Consensus 441 ~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~ 478 (496)
....+.+++.+||+.||++|||++|+++|+|+....
T Consensus 237 --~s~~~~~li~~~L~~dP~~R~t~~eil~h~~~~~~~ 272 (328)
T 3fe3_A 237 --MSTDCENLLKRFLVLNPIKRGTLEQIMKDRWINAGH 272 (328)
T ss_dssp --SCHHHHHHHHHHCCSSTTTSCCHHHHTTCTTTTTTC
T ss_pred --CCHHHHHHHHHHCCCChhHCcCHHHHhcCHhhcCCC
Confidence 112467899999999999999999999999997654
No 22
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=5.1e-47 Score=369.98 Aligned_cols=259 Identities=22% Similarity=0.331 Sum_probs=205.9
Q ss_pred HHhCCCCcceeeecCCeeEEEEEe-CCCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEE
Q 011005 203 ATEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIY 281 (496)
Q Consensus 203 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~ 281 (496)
..++|++.+.||+|+||+||+|.+ .+|+.||||++...........+.+|++++++++||||+++++++...+..++||
T Consensus 8 l~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 87 (347)
T 3zgw_A 8 LLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVL 87 (347)
T ss_dssp TTTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HhcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEE
Confidence 457899999999999999999975 5799999999876543333456889999999999999999999999999999999
Q ss_pred EecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCC
Q 011005 282 EYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHAD 361 (496)
Q Consensus 282 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 361 (496)
||+++|+|.+++.... .+++..++.++.||+.||+||| +.+|+||||||+||+++.++.+||+|||++......
T Consensus 88 E~~~gg~L~~~l~~~~---~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~ 161 (347)
T 3zgw_A 88 EYCPGGELFDYIISQD---RLSEEETRVVFRQIVSAVAYVH---SQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGN 161 (347)
T ss_dssp ECCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBC----
T ss_pred eCCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCccHHHEEEcCCCCEEEEeccCcccccCC
Confidence 9999999999987644 6899999999999999999999 679999999999999999999999999999765433
Q ss_pred CC-CccccccccccccccccccCCc-CcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChh
Q 011005 362 SS-NRTLLAGTYGYIAPELAYTMVM-TEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRK 439 (496)
Q Consensus 362 ~~-~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 439 (496)
.. .....+||+.|+|||++.+..+ +.++||||+|+++|+|++|..||.... .......+.......+..
T Consensus 162 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~-------~~~~~~~i~~~~~~~p~~-- 232 (347)
T 3zgw_A 162 KDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDN-------VMALYKKIMRGKYDVPKW-- 232 (347)
T ss_dssp ----------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSS-------HHHHHHHHHHTCCCCCTT--
T ss_pred CCccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCC-------HHHHHHHHHcCCCCCCCC--
Confidence 22 2345679999999999998876 889999999999999999999996321 222223333333322211
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCC
Q 011005 440 VIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTP 479 (496)
Q Consensus 440 ~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~ 479 (496)
....+.+++.+||+.||++|||++|+++|+|+.....
T Consensus 233 ---~s~~~~~li~~~L~~dP~~Rps~~eil~hp~~~~~~~ 269 (347)
T 3zgw_A 233 ---LSPSSILLLQQMLQVDPKKRISMKNLLNHPWIMQDYN 269 (347)
T ss_dssp ---CCHHHHHHHHHHTCSSGGGSCCHHHHHTCHHHHTTTC
T ss_pred ---CCHHHHHHHHHHcccCHhHCcCHHHHhcCcchhcCCC
Confidence 1123668999999999999999999999999987543
No 23
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.4e-46 Score=362.59 Aligned_cols=262 Identities=23% Similarity=0.295 Sum_probs=215.8
Q ss_pred HhCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEE
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYE 282 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e 282 (496)
.++|++.+.||+|+||+||+|.++ +++.||+|.+..... ....+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~--~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e 81 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGT--DQVLVKKEISILNIARHRNILHLHESFESMEELVMIFE 81 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTH--HHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEEC
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCcc--cHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEE
Confidence 468999999999999999999765 688999999876543 23568899999999999999999999999999999999
Q ss_pred ecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecC--CCCeEEccccccccccC
Q 011005 283 YMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNS--KLEAFVADFGTARLLHA 360 (496)
Q Consensus 283 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~--~~~~kl~Dfg~~~~~~~ 360 (496)
|+++|+|.+++.... ..+++..++.++.|++.||.||| +.+|+||||||+||+++. ++.+||+|||+++....
T Consensus 82 ~~~g~~L~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH---~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~ 156 (321)
T 1tki_A 82 FISGLDIFERINTSA--FELNEREIVSYVHQVCEALQFLH---SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKP 156 (321)
T ss_dssp CCCCCBHHHHHTSSS--CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCT
T ss_pred eCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHH---HCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCC
Confidence 999999999997543 26899999999999999999999 779999999999999987 78999999999987653
Q ss_pred CCCCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhH
Q 011005 361 DSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKV 440 (496)
Q Consensus 361 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 440 (496)
. .......||+.|+|||++.+..++.++||||+|+++|+|++|..||.... .......+.......+ ....
T Consensus 157 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~-------~~~~~~~i~~~~~~~~-~~~~ 227 (321)
T 1tki_A 157 G-DNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAET-------NQQIIENIMNAEYTFD-EEAF 227 (321)
T ss_dssp T-CEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSS-------HHHHHHHHHHTCCCCC-HHHH
T ss_pred C-CccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCC-------HHHHHHHHHcCCCCCC-hhhh
Confidence 3 23345679999999999999989999999999999999999999996321 2222333333333221 1111
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCCCC
Q 011005 441 IRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTPLV 481 (496)
Q Consensus 441 ~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~~~ 481 (496)
......+.+++.+||+.||++|||+.|+++|+|+.......
T Consensus 228 ~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~hp~~~~~~~~~ 268 (321)
T 1tki_A 228 KEISIEAMDFVDRLLVKERKSRMTASEALQHPWLKQKIERV 268 (321)
T ss_dssp TTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHSCGGGS
T ss_pred ccCCHHHHHHHHHHcCCChhHCcCHHHHhcChhhccCcccc
Confidence 12234578999999999999999999999999998765443
No 24
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=7e-46 Score=359.51 Aligned_cols=269 Identities=25% Similarity=0.359 Sum_probs=219.8
Q ss_pred ccccHHHHHHHHhC----------CCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcc
Q 011005 193 GRIVYEDLIEATED----------FDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLH 261 (496)
Q Consensus 193 ~~~~~~~~~~~~~~----------~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h 261 (496)
+.++++++..+++. |...+.||+|+||.||+|..+ +|+.||||++..... ...+.+.+|+.++++++|
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h 101 (321)
T 2c30_A 23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQ-QRRELLFNEVVIMRDYQH 101 (321)
T ss_dssp --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-CSHHHHHHHHHHHTTCCC
T ss_pred CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccch-hHHHHHHHHHHHHHhCCC
Confidence 45677888777764 667789999999999999876 799999999875432 224568899999999999
Q ss_pred cccccccceeecCCeEEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEe
Q 011005 262 RNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILL 341 (496)
Q Consensus 262 ~niv~~~~~~~~~~~~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~ 341 (496)
|||+++++++...+..++||||+++|+|.+++... .+++..+..++.|++.||.||| +.+|+||||||+||++
T Consensus 102 ~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~----~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll 174 (321)
T 2c30_A 102 FNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQV----RLNEEQIATVCEAVLQALAYLH---AQGVIHRDIKSDSILL 174 (321)
T ss_dssp TTBCCEEEEEEETTEEEEEECCCCSCBHHHHHTTC----CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEE
T ss_pred CCcceEEEEEEECCEEEEEEecCCCCCHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEE
Confidence 99999999999999999999999999999998753 5899999999999999999999 6799999999999999
Q ss_pred cCCCCeEEccccccccccCCCCCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCc
Q 011005 342 NSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPK 421 (496)
Q Consensus 342 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~ 421 (496)
+.++.+||+|||++..............||+.|+|||++.+..++.++||||||+++|+|++|+.||.... ..
T Consensus 175 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~-------~~ 247 (321)
T 2c30_A 175 TLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDS-------PV 247 (321)
T ss_dssp CTTCCEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC-------HH
T ss_pred CCCCcEEEeeeeeeeecccCccccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-------HH
Confidence 99999999999999877655444455689999999999999999999999999999999999999986321 11
Q ss_pred chhHhhhcCCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccC
Q 011005 422 IMLIDVLDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKT 478 (496)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~ 478 (496)
...........+.... .......+.+++.+||+.||++|||+.|+++|+|+....
T Consensus 248 ~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~~~~~~ 302 (321)
T 2c30_A 248 QAMKRLRDSPPPKLKN--SHKVSPVLRDFLERMLVRDPQERATAQELLDHPFLLQTG 302 (321)
T ss_dssp HHHHHHHHSSCCCCTT--GGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGGGCC
T ss_pred HHHHHHhcCCCCCcCc--cccCCHHHHHHHHHHccCChhhCcCHHHHhcChhhccCC
Confidence 1122222221111111 111123477899999999999999999999999998654
No 25
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=4.8e-46 Score=362.11 Aligned_cols=254 Identities=23% Similarity=0.317 Sum_probs=212.8
Q ss_pred hCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccch--hHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEE
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIY 281 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~ 281 (496)
++|++.+.||+|+||.||+|..+ +|+.||+|.++... .......+.+|+.+++.++||||+++++++...+..++||
T Consensus 5 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~ 84 (337)
T 1o6l_A 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVM 84 (337)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEE
Confidence 67999999999999999999765 68999999997643 2233466889999999999999999999999999999999
Q ss_pred EecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCC
Q 011005 282 EYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHAD 361 (496)
Q Consensus 282 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 361 (496)
||++||+|.+++.... .+++..++.++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+++.....
T Consensus 85 E~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~ 158 (337)
T 1o6l_A 85 EYANGGELFFHLSRER---VFTEERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD 158 (337)
T ss_dssp ECCTTCBHHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCT
T ss_pred eCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---HCCeecCcCCHHHEEECCCCCEEEeeccchhhcccC
Confidence 9999999999987643 6899999999999999999999 779999999999999999999999999999875544
Q ss_pred CCCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHH
Q 011005 362 SSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVI 441 (496)
Q Consensus 362 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (496)
.......+||+.|+|||++.+..++.++||||+|+++|||++|+.||... ........+.......+..
T Consensus 159 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~-------~~~~~~~~i~~~~~~~p~~---- 227 (337)
T 1o6l_A 159 GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ-------DHERLFELILMEEIRFPRT---- 227 (337)
T ss_dssp TCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCS-------SHHHHHHHHHHCCCCCCTT----
T ss_pred CCcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCC-------CHHHHHHHHHcCCCCCCCC----
Confidence 44455678999999999999999999999999999999999999999632 1222222333332222111
Q ss_pred HHHHHHHHHHHhcccCCCCCCC-----CHHHHHHHHHHhc
Q 011005 442 RDILLISTVSFACLQSNPKSRP-----TMQSVSQEFLITR 476 (496)
Q Consensus 442 ~~~~~l~~li~~cl~~dP~~Rp-----s~~evl~~~~~~~ 476 (496)
....+.+++.+||+.||++|| +++|+++|+|+..
T Consensus 228 -~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h~~f~~ 266 (337)
T 1o6l_A 228 -LSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLS 266 (337)
T ss_dssp -SCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTT
T ss_pred -CCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcCCCcCC
Confidence 112467899999999999999 9999999999854
No 26
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=3.2e-46 Score=363.06 Aligned_cols=282 Identities=33% Similarity=0.576 Sum_probs=224.7
Q ss_pred ccccHHHHHHHHhCCCCcceeeecCCeeEEEEEeCCCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceee
Q 011005 193 GRIVYEDLIEATEDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCL 272 (496)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~ 272 (496)
..+++.++....++|.+.+.||+|+||.||+|..++++.||||++...........+.+|+++++.++||||+++++++.
T Consensus 18 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~ 97 (326)
T 3uim_A 18 KRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCM 97 (326)
T ss_dssp EECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEEC
T ss_pred ceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEEe
Confidence 45678899999999999999999999999999988899999999987554333346889999999999999999999999
Q ss_pred cCCeEEEEEEecCCCChhhhhhCCCC-CccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEcc
Q 011005 273 HKKCMFLIYEYMERGSLFCNLHNNED-AVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVAD 351 (496)
Q Consensus 273 ~~~~~~lV~e~~~~g~L~~~l~~~~~-~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~D 351 (496)
..+..++||||+++|+|.+++..... ...+++..+..++.|++.||+|||+.+..+|+||||||+||+++.++.+||+|
T Consensus 98 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~D 177 (326)
T 3uim_A 98 TPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGD 177 (326)
T ss_dssp CSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEECC
T ss_pred cCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEecc
Confidence 99999999999999999999987542 33589999999999999999999953333999999999999999999999999
Q ss_pred ccccccccCCCCC-ccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCC----------
Q 011005 352 FGTARLLHADSSN-RTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDP---------- 420 (496)
Q Consensus 352 fg~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~---------- 420 (496)
||+++........ .....||+.|+|||++.+..++.++||||+|+++|+|++|+.||+...........
T Consensus 178 fg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 257 (326)
T 3uim_A 178 FGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLK 257 (326)
T ss_dssp CSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTTS
T ss_pred CccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHhh
Confidence 9999876543322 33456999999999999999999999999999999999999999643221111000
Q ss_pred cchhHhhhcCCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhcc
Q 011005 421 KIMLIDVLDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRK 477 (496)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~ 477 (496)
........+....... .......+.+++.+||+.||++|||+.|+++++.....
T Consensus 258 ~~~~~~~~~~~~~~~~---~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~~~ 311 (326)
T 3uim_A 258 EKKLEALVDVDLQGNY---KDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDGL 311 (326)
T ss_dssp SCCSTTSSCTTCTTSC---CHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTSSC
T ss_pred chhhhhhcChhhcccc---CHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCcch
Confidence 0011111111222222 23344568899999999999999999999999986443
No 27
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=7.2e-46 Score=357.88 Aligned_cols=266 Identities=24% Similarity=0.325 Sum_probs=208.1
Q ss_pred HhCCCCcceeeecCCeeEEEEEeCCCcEEEEEEcccchh-HHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEE
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEE-LAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYE 282 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e 282 (496)
.++|++.+.||+|+||+||+|.+.+++.||+|++..... ......+.+|++++++++||||+++++++..+...++|||
T Consensus 20 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 99 (311)
T 3niz_A 20 MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFE 99 (311)
T ss_dssp SCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEE
T ss_pred HhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEc
Confidence 478999999999999999999998899999999976432 2334678899999999999999999999999999999999
Q ss_pred ecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCC
Q 011005 283 YMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADS 362 (496)
Q Consensus 283 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 362 (496)
|+++ +|.+.+.... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++......
T Consensus 100 ~~~~-~l~~~~~~~~--~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~ 173 (311)
T 3niz_A 100 FMEK-DLKKVLDENK--TGLQDSQIKIYLYQLLRGVAHCH---QHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPV 173 (311)
T ss_dssp CCSE-EHHHHHHTCT--TCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEETTSCC
T ss_pred CCCC-CHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCchHhEEECCCCCEEEccCcCceecCCCc
Confidence 9985 8888877543 25899999999999999999999 7799999999999999999999999999998776554
Q ss_pred CCcccccccccccccccccc-CCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCC------
Q 011005 363 SNRTLLAGTYGYIAPELAYT-MVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPP------ 435 (496)
Q Consensus 363 ~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 435 (496)
.......+|+.|+|||++.+ ..++.++||||+|+++|+|++|+.||...... ..............+..
T Consensus 174 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~----~~~~~i~~~~~~~~~~~~~~~~~ 249 (311)
T 3niz_A 174 RSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDD----DQLPKIFSILGTPNPREWPQVQE 249 (311)
T ss_dssp C---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTT----THHHHHHHHHCCCCTTTSGGGTT
T ss_pred ccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChH----HHHHHHHHHHCCCChHHhhhhhc
Confidence 44555678999999999876 56899999999999999999999999643211 00001111111100000
Q ss_pred -----------CChhH-----HHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCC
Q 011005 436 -----------VDRKV-----IRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTP 479 (496)
Q Consensus 436 -----------~~~~~-----~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~ 479 (496)
..... ......+.+|+.+||+.||++|||++|+++|+|+..-.+
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~ 309 (311)
T 3niz_A 250 LPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKDLDP 309 (311)
T ss_dssp SHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTSCT
T ss_pred cchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcCcccccCCc
Confidence 00000 001124678999999999999999999999999976543
No 28
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=3.1e-46 Score=376.17 Aligned_cols=261 Identities=21% Similarity=0.276 Sum_probs=214.2
Q ss_pred HHhCCCCcceeeecCCeeEEEEEe-CCCcEEEEEEcccch-hHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEE
Q 011005 203 ATEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSE-ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLI 280 (496)
Q Consensus 203 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV 280 (496)
..++|++.+.||+|+||+||+|.. .+|+.||+|.+.... .....+.+.+|+.+++.++||||+++++++.+++..++|
T Consensus 9 ~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv 88 (444)
T 3soa_A 9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLI 88 (444)
T ss_dssp HHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEE
T ss_pred ccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEE
Confidence 567899999999999999999965 478999999987643 333456789999999999999999999999999999999
Q ss_pred EEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEec---CCCCeEEcccccccc
Q 011005 281 YEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLN---SKLEAFVADFGTARL 357 (496)
Q Consensus 281 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~---~~~~~kl~Dfg~~~~ 357 (496)
|||++||+|.+.+.... .+++..+..++.||+.||.||| +.+|+||||||+|||++ .++.+||+|||++..
T Consensus 89 ~E~~~gg~L~~~i~~~~---~~~e~~~~~i~~qil~aL~~lH---~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~ 162 (444)
T 3soa_A 89 FDLVTGGELFEDIVARE---YYSEADASHCIQQILEAVLHCH---QMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIE 162 (444)
T ss_dssp ECCCBCCBHHHHHHHCS---CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBC
T ss_pred EEeCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEeccCCCCcEEEccCceeEE
Confidence 99999999999988654 6899999999999999999999 77999999999999998 467899999999987
Q ss_pred ccCCCCCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCC
Q 011005 358 LHADSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVD 437 (496)
Q Consensus 358 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (496)
............||+.|+|||++.+..++.++||||+|+++|+|++|+.||.... .......+.......+..
T Consensus 163 ~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~-------~~~~~~~i~~~~~~~~~~ 235 (444)
T 3soa_A 163 VEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDED-------QHRLYQQIKAGAYDFPSP 235 (444)
T ss_dssp CCTTCCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSS-------HHHHHHHHHHTCCCCCTT
T ss_pred ecCCCceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCcc-------HHHHHHHHHhCCCCCCcc
Confidence 7655544456789999999999999999999999999999999999999996321 222223333332221111
Q ss_pred hhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhcc
Q 011005 438 RKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRK 477 (496)
Q Consensus 438 ~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~ 477 (496)
. .......+.+++.+||+.||++|||+.|+++|+|+...
T Consensus 236 ~-~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~hp~~~~~ 274 (444)
T 3soa_A 236 E-WDTVTPEAKDLINKMLTINPSKRITAAEALKHPWISHR 274 (444)
T ss_dssp T-TTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSCTTHHH
T ss_pred c-cccCCHHHHHHHHHHcCCChhHCCCHHHHhcCccccCC
Confidence 0 11112347799999999999999999999999999754
No 29
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=4.8e-46 Score=360.87 Aligned_cols=260 Identities=25% Similarity=0.354 Sum_probs=209.3
Q ss_pred HhCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEE
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYE 282 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e 282 (496)
.++|++.+.||+|+||+||+|.+. +++.||+|++.........+.+.+|+.+++.++||||+++++++.+++..++|||
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e 85 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEE
Confidence 468999999999999999999765 7899999999765544444678899999999999999999999999999999999
Q ss_pred ecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCC
Q 011005 283 YMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADS 362 (496)
Q Consensus 283 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 362 (496)
|+++|+|.+++.... .+++..++.++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++.+....
T Consensus 86 ~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 159 (323)
T 3tki_A 86 YCSGGELFDRIEPDI---GMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN 159 (323)
T ss_dssp CCTTEEGGGGSBTTT---BCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETT
T ss_pred cCCCCcHHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHH---HCCccccccchHHEEEeCCCCEEEEEeeccceeccCC
Confidence 999999999997653 6899999999999999999999 7799999999999999999999999999998664332
Q ss_pred --CCccccccccccccccccccCCc-CcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChh
Q 011005 363 --SNRTLLAGTYGYIAPELAYTMVM-TEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRK 439 (496)
Q Consensus 363 --~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 439 (496)
.......||+.|+|||++.+..+ +.++||||+|+++|+|++|+.||..... ...................
T Consensus 160 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~------~~~~~~~~~~~~~~~~~~~- 232 (323)
T 3tki_A 160 RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD------SCQEYSDWKEKKTYLNPWK- 232 (323)
T ss_dssp EECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCT------TSHHHHHHHTTCTTSTTGG-
T ss_pred cccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCch------HHHHHHHHhcccccCCccc-
Confidence 12334679999999999988776 7799999999999999999999963221 1112222222222111111
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccC
Q 011005 440 VIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKT 478 (496)
Q Consensus 440 ~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~ 478 (496)
.....+.+|+.+||+.||++|||++|+++|+|+....
T Consensus 233 --~~~~~~~~li~~~L~~dP~~R~t~~eil~h~~~~~~~ 269 (323)
T 3tki_A 233 --KIDSAPLALLHKILVENPSARITIPDIKKDRWYNKPL 269 (323)
T ss_dssp --GSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTCCC
T ss_pred --cCCHHHHHHHHHHccCChhhCcCHHHHhhChhhcccc
Confidence 1123467899999999999999999999999997654
No 30
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=5.7e-46 Score=364.83 Aligned_cols=259 Identities=24% Similarity=0.313 Sum_probs=212.5
Q ss_pred HHhCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchhH-----HHHHHHHHHHHHHHhhcccccccccceeecCCe
Q 011005 203 ATEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEEL-----AFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKC 276 (496)
Q Consensus 203 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-----~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 276 (496)
..++|++.+.||+|+||+||+|..+ +|+.||+|.+...... ...+.+.+|+.+++.++||||+++++++.....
T Consensus 10 ~~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 89 (361)
T 2yab_A 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTD 89 (361)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSE
T ss_pred hhhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCE
Confidence 3467999999999999999999765 6899999999764321 124678899999999999999999999999999
Q ss_pred EEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCC----CeEEccc
Q 011005 277 MFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKL----EAFVADF 352 (496)
Q Consensus 277 ~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~----~~kl~Df 352 (496)
.++||||++||+|.+++.... .+++..+..++.||+.||.||| +.||+||||||+||+++.++ .+||+||
T Consensus 90 ~~lv~e~~~gg~L~~~l~~~~---~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~~~~vkl~DF 163 (361)
T 2yab_A 90 VVLILELVSGGELFDFLAQKE---SLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDF 163 (361)
T ss_dssp EEEEEECCCSCBHHHHHTTCS---CCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESCTTSSSCCEEECCC
T ss_pred EEEEEEcCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEeCCCCCccCEEEEec
Confidence 999999999999999997643 6899999999999999999999 67999999999999998877 7999999
Q ss_pred cccccccCCCCCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCC
Q 011005 353 GTARLLHADSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRL 432 (496)
Q Consensus 353 g~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (496)
|+++...... .....+||+.|+|||++.+..++.++||||+|+++|+|++|..||.... .......+.....
T Consensus 164 G~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~-------~~~~~~~i~~~~~ 235 (361)
T 2yab_A 164 GLAHEIEDGV-EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT-------KQETLANITAVSY 235 (361)
T ss_dssp SSCEECCTTC-CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSS-------HHHHHHHHHTTCC
T ss_pred CCceEcCCCC-ccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCC-------HHHHHHHHHhcCC
Confidence 9998765432 3345679999999999999999999999999999999999999996321 1222222222222
Q ss_pred CCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhc
Q 011005 433 PPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITR 476 (496)
Q Consensus 433 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~ 476 (496)
..+ ..........+.+|+.+||..||++|||+.|+++|+|+..
T Consensus 236 ~~~-~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~ 278 (361)
T 2yab_A 236 DFD-EEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWITP 278 (361)
T ss_dssp CCC-HHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTSC
T ss_pred CCC-chhccCCCHHHHHHHHHHCCCChhHCcCHHHHhcCcCcCC
Confidence 211 1111122235779999999999999999999999999864
No 31
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=3e-46 Score=364.03 Aligned_cols=258 Identities=20% Similarity=0.342 Sum_probs=209.6
Q ss_pred HHhCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCC------
Q 011005 203 ATEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKK------ 275 (496)
Q Consensus 203 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~------ 275 (496)
..++|++.+.||+|+||.||+|.++ +++.||||++.........+.+.+|+.++++++||||+++++++.+..
T Consensus 4 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 83 (332)
T 3qd2_B 4 YLTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQE 83 (332)
T ss_dssp HHHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHH
T ss_pred hhhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhh
Confidence 4578999999999999999999875 799999999976554445578899999999999999999999885533
Q ss_pred ---------------------------------------------------eEEEEEEecCCCChhhhhhCCCCCccCCH
Q 011005 276 ---------------------------------------------------CMFLIYEYMERGSLFCNLHNNEDAVELDW 304 (496)
Q Consensus 276 ---------------------------------------------------~~~lV~e~~~~g~L~~~l~~~~~~~~~~~ 304 (496)
..++||||+++|+|.+++.........++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~ 163 (332)
T 3qd2_B 84 EMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREH 163 (332)
T ss_dssp HHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCH
T ss_pred hhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhh
Confidence 37999999999999999998776667788
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCC------------Ccccccccc
Q 011005 305 AKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSS------------NRTLLAGTY 372 (496)
Q Consensus 305 ~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~------------~~~~~~gt~ 372 (496)
..++.++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++....... ......||+
T Consensus 164 ~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~ 240 (332)
T 3qd2_B 164 GVCLHIFIQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTK 240 (332)
T ss_dssp HHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CG
T ss_pred HHHHHHHHHHHHHHHHHH---hCCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCc
Confidence 889999999999999999 77999999999999999999999999999987754421 123356999
Q ss_pred ccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHHHHHHHHHHHHH
Q 011005 373 GYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVIRDILLISTVSF 452 (496)
Q Consensus 373 ~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 452 (496)
.|+|||++.+..++.++||||+|+++|+|++|..|+.... .......... ...........+.+++.
T Consensus 241 ~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~~---------~~~~~~~~~~----~~~~~~~~~~~~~~li~ 307 (332)
T 3qd2_B 241 LYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERV---------RIITDVRNLK----FPLLFTQKYPQEHMMVQ 307 (332)
T ss_dssp GGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHHH---------HHHHHHHTTC----CCHHHHHHCHHHHHHHH
T ss_pred CccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHHH---------HHHHHhhccC----CCcccccCChhHHHHHH
Confidence 9999999999999999999999999999999988753211 1111111111 11222333345688999
Q ss_pred hcccCCCCCCCCHHHHHHHHHHhc
Q 011005 453 ACLQSNPKSRPTMQSVSQEFLITR 476 (496)
Q Consensus 453 ~cl~~dP~~Rps~~evl~~~~~~~ 476 (496)
+||+.||++|||++|+++|+|+..
T Consensus 308 ~~l~~~p~~Rps~~~~l~~~~f~~ 331 (332)
T 3qd2_B 308 DMLSPSPTERPEATDIIENAIFEN 331 (332)
T ss_dssp HHHCSSGGGSCCHHHHHHSTTCCC
T ss_pred HHccCCCCcCCCHHHHhhchhhhc
Confidence 999999999999999999999753
No 32
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=2.2e-46 Score=366.87 Aligned_cols=255 Identities=22% Similarity=0.371 Sum_probs=209.0
Q ss_pred HhCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccch--hHHHHHHHHHHHHHHHhh-cccccccccceeecCCeEEE
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQV-LHRNIVKLYGYCLHKKCMFL 279 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~l 279 (496)
.++|++.+.||+|+||+||+|.++ +++.||+|+++... .......+.+|..+++.+ +||||+++++++...+..++
T Consensus 22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 101 (353)
T 3txo_A 22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFF 101 (353)
T ss_dssp -CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEE
Confidence 478999999999999999999765 68999999997643 223346678999999988 69999999999999999999
Q ss_pred EEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEcccccccccc
Q 011005 280 IYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLH 359 (496)
Q Consensus 280 V~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 359 (496)
||||++||+|.+++.... .+++..++.++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+++...
T Consensus 102 v~E~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NILl~~~g~ikL~DFG~a~~~~ 175 (353)
T 3txo_A 102 VMEFVNGGDLMFHIQKSR---RFDEARARFYAAEIISALMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGI 175 (353)
T ss_dssp EEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSC
T ss_pred EEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---HCCCcccCCCHHHEEECCCCCEEEccccceeecc
Confidence 999999999999997654 6899999999999999999999 7799999999999999999999999999998654
Q ss_pred CCCCCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChh
Q 011005 360 ADSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRK 439 (496)
Q Consensus 360 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 439 (496)
.........+||+.|+|||++.+..++.++||||+||++|||++|+.||... ........+.......+..
T Consensus 176 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~-------~~~~~~~~i~~~~~~~p~~-- 246 (353)
T 3txo_A 176 CNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAE-------NEDDLFEAILNDEVVYPTW-- 246 (353)
T ss_dssp C---------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCS-------SHHHHHHHHHHCCCCCCTT--
T ss_pred cCCccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCC-------CHHHHHHHHHcCCCCCCCC--
Confidence 4444455678999999999999999999999999999999999999999632 2223334444443332211
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCCH------HHHHHHHHHhc
Q 011005 440 VIRDILLISTVSFACLQSNPKSRPTM------QSVSQEFLITR 476 (496)
Q Consensus 440 ~~~~~~~l~~li~~cl~~dP~~Rps~------~evl~~~~~~~ 476 (496)
....+.+++.+||+.||++||++ +|+++|+|+..
T Consensus 247 ---~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~hp~f~~ 286 (353)
T 3txo_A 247 ---LHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRHPFFKE 286 (353)
T ss_dssp ---SCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHTSGGGTT
T ss_pred ---CCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhhCCcccC
Confidence 11246789999999999999998 89999999864
No 33
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=8.4e-46 Score=356.88 Aligned_cols=260 Identities=28% Similarity=0.434 Sum_probs=202.5
Q ss_pred HhCCCCcceeeecCCeeEEEEEeCCCcEEEEEEcccch-hHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEE
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSE-ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYE 282 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e 282 (496)
.++|++.+.||+|+||+||+|.+ +++.||||++.... .....+.+.+|++++++++||||+++++++......++|||
T Consensus 36 ~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 114 (309)
T 3p86_A 36 WCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTE 114 (309)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEEE
T ss_pred hhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEEe
Confidence 56899999999999999999987 68899999987643 33445678999999999999999999999999999999999
Q ss_pred ecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCC--eEEeCCCCCceEecCCCCeEEccccccccccC
Q 011005 283 YMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPS--IIHRDISSNNILLNSKLEAFVADFGTARLLHA 360 (496)
Q Consensus 283 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~--i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 360 (496)
|+++|+|.+++........+++..++.++.|++.||+||| +.+ |+||||||+||+++.++.+||+|||+++....
T Consensus 115 ~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~ 191 (309)
T 3p86_A 115 YLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH---NRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKAS 191 (309)
T ss_dssp CCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHH---TSSSCCCCTTCCGGGEEECTTCCEEECCCC-------
T ss_pred cCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHH---cCCCCEECCCCChhhEEEeCCCcEEECCCCCCccccc
Confidence 9999999999987654445899999999999999999999 678 99999999999999999999999999986654
Q ss_pred CCCCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhH
Q 011005 361 DSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKV 440 (496)
Q Consensus 361 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 440 (496)
.........||+.|+|||++.+..++.++||||||+++|+|++|+.||.... ...................
T Consensus 192 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~-------~~~~~~~~~~~~~~~~~~~-- 262 (309)
T 3p86_A 192 TFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLN-------PAQVVAAVGFKCKRLEIPR-- 262 (309)
T ss_dssp ----------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSC-------HHHHHHHHHHSCCCCCCCT--
T ss_pred cccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-------HHHHHHHHHhcCCCCCCCc--
Confidence 4334455679999999999999999999999999999999999999996322 1111111111111111111
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhcc
Q 011005 441 IRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRK 477 (496)
Q Consensus 441 ~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~ 477 (496)
.....+.+++.+||+.||++|||++|+++.+...-+
T Consensus 263 -~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~ 298 (309)
T 3p86_A 263 -NLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIK 298 (309)
T ss_dssp -TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC
T ss_pred -cCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 111247789999999999999999999997765544
No 34
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.1e-45 Score=354.68 Aligned_cols=256 Identities=22% Similarity=0.309 Sum_probs=202.6
Q ss_pred HhCCCCcceeeecCCeeEEEEEe-CCCcEEEEEEcccchhH-------------------------HHHHHHHHHHHHHH
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSEEL-------------------------AFIKSFKNEAQVLS 257 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-------------------------~~~~~~~~e~~~l~ 257 (496)
.++|++.+.||+|+||.||+|.. .+++.||+|.+...... ...+.+.+|+++++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 36799999999999999999976 46889999998654311 12356889999999
Q ss_pred hhcccccccccceeec--CCeEEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCC
Q 011005 258 QVLHRNIVKLYGYCLH--KKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDIS 335 (496)
Q Consensus 258 ~l~h~niv~~~~~~~~--~~~~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlk 335 (496)
+++||||+++++++.. ....++||||+++++|.+++.. ..+++..++.++.||+.||+||| +.+|+|||||
T Consensus 92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlk 164 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL----KPLSEDQARFYFQDLIKGIEYLH---YQKIIHRDIK 164 (298)
T ss_dssp TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS----SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCC
T ss_pred hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCC
Confidence 9999999999999986 5689999999999999876543 26899999999999999999999 6799999999
Q ss_pred CCceEecCCCCeEEccccccccccCCCCCccccccccccccccccccCC---cCcccchhhHHHHHHHHHhCCCCCcccc
Q 011005 336 SNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYTMV---MTEKCDVYSFGVVTLEVLMGKHPRDILS 412 (496)
Q Consensus 336 p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~DvwslG~il~el~~g~~p~~~~~ 412 (496)
|+||+++.++.+||+|||+++.............||+.|+|||++.+.. ++.++||||||+++|+|++|+.||....
T Consensus 165 p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~ 244 (298)
T 2zv2_A 165 PSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDER 244 (298)
T ss_dssp GGGEEECTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred HHHEEECCCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCcc
Confidence 9999999999999999999987765444445567999999999998765 4778999999999999999999986321
Q ss_pred ccCCCCCCcchhHhhhcCCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhc
Q 011005 413 SLSSSSDPKIMLIDVLDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITR 476 (496)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~ 476 (496)
...............+.... ....+.+++.+||+.||++|||+.|+++|+|+.+
T Consensus 245 -------~~~~~~~~~~~~~~~~~~~~---~~~~l~~li~~~l~~dp~~R~s~~e~l~hp~~~~ 298 (298)
T 2zv2_A 245 -------IMCLHSKIKSQALEFPDQPD---IAEDLKDLITRMLDKNPESRIVVPEIKLHPWVTR 298 (298)
T ss_dssp -------HHHHHHHHHHCCCCCCSSSC---CCHHHHHHHHHHTCSCTTTSCCHHHHTTCHHHHC
T ss_pred -------HHHHHHHHhcccCCCCCccc---cCHHHHHHHHHHhhcChhhCCCHHHHhcCccccC
Confidence 11111222222222111111 1124778999999999999999999999999864
No 35
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=1.3e-45 Score=363.20 Aligned_cols=260 Identities=23% Similarity=0.343 Sum_probs=213.5
Q ss_pred HHhCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccch-hHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEE
Q 011005 203 ATEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSE-ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLI 280 (496)
Q Consensus 203 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV 280 (496)
..++|++.+.||+|+||.||+|.++ +++.||+|.+.... .....+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 27 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv 106 (362)
T 2bdw_A 27 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 106 (362)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 4678999999999999999999764 68999999997643 233456789999999999999999999999999999999
Q ss_pred EEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCC---CCeEEcccccccc
Q 011005 281 YEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSK---LEAFVADFGTARL 357 (496)
Q Consensus 281 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~---~~~kl~Dfg~~~~ 357 (496)
|||+++|+|.+.+.... .+++..+..++.||+.||.||| +.+|+||||||+||+++.+ +.+||+|||++..
T Consensus 107 ~e~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~al~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~ 180 (362)
T 2bdw_A 107 FDLVTGGELFEDIVARE---FYSEADASHCIQQILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIE 180 (362)
T ss_dssp ECCCCSCBHHHHHTTCS---CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBC
T ss_pred EecCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCchHHEEEecCCCCCCEEEeecCcceE
Confidence 99999999999987653 6899999999999999999999 6799999999999999865 4599999999987
Q ss_pred ccCCCCCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCC
Q 011005 358 LHADSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVD 437 (496)
Q Consensus 358 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (496)
.... .......||+.|+|||++.+..++.++||||+||++|+|++|+.||.... .......+.......+..
T Consensus 181 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~-------~~~~~~~i~~~~~~~~~~ 252 (362)
T 2bdw_A 181 VNDS-EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDED-------QHRLYAQIKAGAYDYPSP 252 (362)
T ss_dssp CTTC-CSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS-------HHHHHHHHHHTCCCCCTT
T ss_pred ecCC-cccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCC-------HHHHHHHHHhCCCCCCcc
Confidence 6533 23345679999999999999999999999999999999999999986321 122222233332222211
Q ss_pred hhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhcc
Q 011005 438 RKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRK 477 (496)
Q Consensus 438 ~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~ 477 (496)
. .......+.+++.+||+.||++|||+.|+++|+|+...
T Consensus 253 ~-~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~ 291 (362)
T 2bdw_A 253 E-WDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWICNR 291 (362)
T ss_dssp G-GGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTSHHHHTH
T ss_pred c-ccCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcccCCC
Confidence 1 11122357799999999999999999999999999754
No 36
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=9.2e-46 Score=366.61 Aligned_cols=262 Identities=23% Similarity=0.378 Sum_probs=211.7
Q ss_pred HhCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccch--hHHHHHHHHHHHHHHHhh-cccccccccceeecCCeEEE
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQV-LHRNIVKLYGYCLHKKCMFL 279 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~l 279 (496)
.++|++.+.||+|+||+||+|..+ +++.||+|+++... .....+.+.+|..+++++ +||||+++++++..++..++
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 130 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 130 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence 367999999999999999999765 58899999997643 222334578899999887 79999999999999999999
Q ss_pred EEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEcccccccccc
Q 011005 280 IYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLH 359 (496)
Q Consensus 280 V~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 359 (496)
||||++||+|..++.... .+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+++...
T Consensus 131 V~E~~~gg~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~LH---~~givHrDLKp~NILl~~~g~ikL~DFGla~~~~ 204 (396)
T 4dc2_A 131 VIEYVNGGDLMFHMQRQR---KLPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL 204 (396)
T ss_dssp EEECCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCC
T ss_pred EEEcCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---HCCEEeccCCHHHEEECCCCCEEEeecceeeecc
Confidence 999999999999998643 6899999999999999999999 7799999999999999999999999999998754
Q ss_pred CCCCCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCC--CCcchhHhhhcCCCCCCCC
Q 011005 360 ADSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSS--DPKIMLIDVLDQRLPPPVD 437 (496)
Q Consensus 360 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 437 (496)
.........+||+.|+|||++.+..++.++||||+||++|||++|+.||.......... ........+.......+..
T Consensus 205 ~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~ 284 (396)
T 4dc2_A 205 RPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRS 284 (396)
T ss_dssp CTTCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCCCCCTT
T ss_pred cCCCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhccccCCCCc
Confidence 44455566789999999999999999999999999999999999999996432211111 1111222333333322211
Q ss_pred hhHHHHHHHHHHHHHhcccCCCCCCCCH------HHHHHHHHHhc
Q 011005 438 RKVIRDILLISTVSFACLQSNPKSRPTM------QSVSQEFLITR 476 (496)
Q Consensus 438 ~~~~~~~~~l~~li~~cl~~dP~~Rps~------~evl~~~~~~~ 476 (496)
....+.+|+.+||+.||++||++ +|+++|+|+..
T Consensus 285 -----~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~Hpff~~ 324 (396)
T 4dc2_A 285 -----LSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRN 324 (396)
T ss_dssp -----SCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHSTTTTT
T ss_pred -----CCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcCccccC
Confidence 11246789999999999999985 89999999864
No 37
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=7.3e-46 Score=359.91 Aligned_cols=262 Identities=21% Similarity=0.300 Sum_probs=191.2
Q ss_pred cceeeecCCeeEEEEEeC-CCcEEEEEEcccchhHHHHHHHHHHHHHHHhhc-ccccccccceeecCCeEEEEEEecCCC
Q 011005 210 RYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVL-HRNIVKLYGYCLHKKCMFLIYEYMERG 287 (496)
Q Consensus 210 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lV~e~~~~g 287 (496)
.+.||+|+||+||+|.++ +++.||||++.... ...+.+|+.+++.+. ||||+++++++.++...++||||+++|
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~ 91 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKRM----EANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGG 91 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGGG----HHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChhh----hhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCC
Confidence 378999999999999765 68999999986543 255678999999997 999999999999999999999999999
Q ss_pred ChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCC---CeEEccccccccccCCCCC
Q 011005 288 SLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKL---EAFVADFGTARLLHADSSN 364 (496)
Q Consensus 288 ~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~---~~kl~Dfg~~~~~~~~~~~ 364 (496)
+|.+++.... .+++..+..++.||+.||+||| +.+|+||||||+||+++.++ .+||+|||+++........
T Consensus 92 ~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~ 165 (325)
T 3kn6_A 92 ELFERIKKKK---HFSETEASYIMRKLVSAVSHMH---DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQP 165 (325)
T ss_dssp BHHHHHHHCS---CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC----
T ss_pred cHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---HCCCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCCc
Confidence 9999998754 6899999999999999999999 77999999999999998765 7999999999876555444
Q ss_pred ccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHHHHH
Q 011005 365 RTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVIRDI 444 (496)
Q Consensus 365 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (496)
....+||+.|+|||++.+..++.++||||+|+++|+|++|+.||..................+....... .........
T Consensus 166 ~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~s 244 (325)
T 3kn6_A 166 LKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSF-EGEAWKNVS 244 (325)
T ss_dssp ------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCCCC-CSHHHHTSC
T ss_pred ccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCCC-CcccccCCC
Confidence 5566789999999999999999999999999999999999999975432111111111222222222222 222222233
Q ss_pred HHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCCCCC
Q 011005 445 LLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTPLVK 482 (496)
Q Consensus 445 ~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~~~~ 482 (496)
..+.+|+.+||+.||++|||++|+++|+|+........
T Consensus 245 ~~~~~li~~~L~~dP~~Rpt~~ell~h~w~~~~~~~~~ 282 (325)
T 3kn6_A 245 QEAKDLIQGLLTVDPNKRLKMSGLRYNEWLQDGSQLSS 282 (325)
T ss_dssp HHHHHHHHHHHCCCTTTCCCTTTSTTCGGGCTTCCCCC
T ss_pred HHHHHHHHHHCCCChhHCCCHHHHhcChhhccCccCCC
Confidence 45789999999999999999999999999987655443
No 38
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=1e-45 Score=362.76 Aligned_cols=263 Identities=20% Similarity=0.275 Sum_probs=212.8
Q ss_pred HHhCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchhH----HHHHHHHHHHHHHHhhcccccccccceeecCCeE
Q 011005 203 ATEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEEL----AFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCM 277 (496)
Q Consensus 203 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~----~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 277 (496)
..++|++.+.||+|+||+||+|..+ +++.||+|++...... ...+.+.+|+.+++.++||||+++++++...+..
T Consensus 22 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~ 101 (351)
T 3c0i_A 22 FEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGML 101 (351)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEE
T ss_pred cccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence 3567999999999999999999764 6899999998653311 1246789999999999999999999999999999
Q ss_pred EEEEEecCCCChhhhhhCCC-CCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCC---eEEcccc
Q 011005 278 FLIYEYMERGSLFCNLHNNE-DAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLE---AFVADFG 353 (496)
Q Consensus 278 ~lV~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~---~kl~Dfg 353 (496)
++||||+++|+|.+.+.... ....+++..+..++.||+.||+||| +.+|+||||||+||+++.++. +||+|||
T Consensus 102 ~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg 178 (351)
T 3c0i_A 102 YMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCH---DNNIIHRDVKPHCVLLASKENSAPVKLGGFG 178 (351)
T ss_dssp EEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECSSSTTCCEEECCCT
T ss_pred EEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCChHHeEEecCCCCCcEEEecCc
Confidence 99999999999988776432 2235899999999999999999999 779999999999999987654 9999999
Q ss_pred ccccccCCCCCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCC
Q 011005 354 TARLLHADSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLP 433 (496)
Q Consensus 354 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (496)
++.............+||+.|+|||++.+..++.++||||+|+++|+|++|+.||.... .............
T Consensus 179 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~--------~~~~~~i~~~~~~ 250 (351)
T 3c0i_A 179 VAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTK--------ERLFEGIIKGKYK 250 (351)
T ss_dssp TCEECCTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSH--------HHHHHHHHHTCCC
T ss_pred ceeEecCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcH--------HHHHHHHHcCCCC
Confidence 99887654444455679999999999999999999999999999999999999996321 1222222223222
Q ss_pred CCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhcc
Q 011005 434 PPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRK 477 (496)
Q Consensus 434 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~ 477 (496)
... .........+.+++.+||+.||++|||+.|+++|+|+...
T Consensus 251 ~~~-~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~hp~~~~~ 293 (351)
T 3c0i_A 251 MNP-RQWSHISESAKDLVRRMLMLDPAERITVYEALNHPWLKER 293 (351)
T ss_dssp CCH-HHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHTH
T ss_pred CCc-cccccCCHHHHHHHHHHCCCChhHCcCHHHHhcChhhcCC
Confidence 111 1111123357899999999999999999999999999764
No 39
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=1.5e-46 Score=377.15 Aligned_cols=264 Identities=25% Similarity=0.318 Sum_probs=212.3
Q ss_pred HHHHHHHHhCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchh--HHHHHHHHHHHHHHHhhcccccccccceeec
Q 011005 197 YEDLIEATEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEE--LAFIKSFKNEAQVLSQVLHRNIVKLYGYCLH 273 (496)
Q Consensus 197 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~ 273 (496)
+.++....++|++.+.||+|+||+||+|.++ +++.||+|++..... ......+.+|..++..++||||+++++++.+
T Consensus 66 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~ 145 (437)
T 4aw2_A 66 VKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQD 145 (437)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEEC
T ss_pred hhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee
Confidence 3444445689999999999999999999876 478999999976432 1122347899999999999999999999999
Q ss_pred CCeEEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEcccc
Q 011005 274 KKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFG 353 (496)
Q Consensus 274 ~~~~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg 353 (496)
++..++||||++||+|.+++.... ..+++..++.++.||+.||.||| +.+|+||||||+|||++.++.+||+|||
T Consensus 146 ~~~~~lV~Ey~~gg~L~~~l~~~~--~~l~e~~~~~~~~qi~~aL~~LH---~~giiHrDLKp~NILl~~~g~vkL~DFG 220 (437)
T 4aw2_A 146 DNNLYLVMDYYVGGDLLTLLSKFE--DRLPEEMARFYLAEMVIAIDSVH---QLHYVHRDIKPDNILMDMNGHIRLADFG 220 (437)
T ss_dssp SSEEEEEECCCTTCBHHHHHHTTT--TCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCT
T ss_pred CCEEEEEEecCCCCcHHHHHHHcc--CCCCHHHHHHHHHHHHHHHHHHH---hCCeEecccCHHHeeEcCCCCEEEcchh
Confidence 999999999999999999998632 26899999999999999999999 7799999999999999999999999999
Q ss_pred ccccccCCCCC-ccccccccccccccccc-----cCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhh
Q 011005 354 TARLLHADSSN-RTLLAGTYGYIAPELAY-----TMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDV 427 (496)
Q Consensus 354 ~~~~~~~~~~~-~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~ 427 (496)
+++........ ....+||+.|+|||++. ...++.++||||+||++|||++|+.||.... .......+
T Consensus 221 la~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~-------~~~~~~~i 293 (437)
T 4aw2_A 221 SCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAES-------LVETYGKI 293 (437)
T ss_dssp TCEECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSS-------HHHHHHHH
T ss_pred hhhhcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCC-------hhHHHHhh
Confidence 99876544332 23468999999999987 5678999999999999999999999996321 11222222
Q ss_pred hc----CCCCCCCChhHHHHHHHHHHHHHhcccCCCCC--CCCHHHHHHHHHHhc
Q 011005 428 LD----QRLPPPVDRKVIRDILLISTVSFACLQSNPKS--RPTMQSVSQEFLITR 476 (496)
Q Consensus 428 ~~----~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--Rps~~evl~~~~~~~ 476 (496)
+. ...+..... ....+.+|+.+||..+|++ ||+++|+++|+|+..
T Consensus 294 ~~~~~~~~~p~~~~~----~s~~~~dLi~~lL~~~~~r~~r~~~~eil~Hpff~~ 344 (437)
T 4aw2_A 294 MNHKERFQFPTQVTD----VSENAKDLIRRLICSREHRLGQNGIEDFKKHPFFSG 344 (437)
T ss_dssp HTHHHHCCCCSSCCC----SCHHHHHHHHTTSSCGGGCTTTTTTHHHHTSGGGTT
T ss_pred hhccccccCCccccc----CCHHHHHHHHHHhcccccccCCCCHHHHhCCCccCC
Confidence 21 122221111 1124678999999988888 999999999999964
No 40
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.2e-45 Score=358.84 Aligned_cols=253 Identities=23% Similarity=0.350 Sum_probs=208.1
Q ss_pred hCCCCcceeeecCCeeEEEEEe-CCCcEEEEEEcccch--hHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEE
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIY 281 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~ 281 (496)
++|.+.+.||+|+||.||+|.+ .+++.||+|++.... .......+.+|+.+++.++||||+++++++..++..++||
T Consensus 9 ~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 88 (336)
T 3h4j_B 9 GPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVI 88 (336)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 6799999999999999999976 578999999987542 1122356889999999999999999999999999999999
Q ss_pred EecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCC
Q 011005 282 EYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHAD 361 (496)
Q Consensus 282 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 361 (496)
||+ +|+|.+++.... .+++..++.++.|++.||.||| +.||+||||||+||+++.++.+||+|||++......
T Consensus 89 E~~-~g~l~~~l~~~~---~l~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~ 161 (336)
T 3h4j_B 89 EYA-GGELFDYIVEKK---RMTEDEGRRFFQQIICAIEYCH---RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDG 161 (336)
T ss_dssp CCC-CEEHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHH---HHTCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTS
T ss_pred ECC-CCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCchhhEEEcCCCCEEEEEeccceeccCC
Confidence 999 789988887543 6899999999999999999999 679999999999999999999999999999876443
Q ss_pred CCCccccccccccccccccccCCc-CcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcC--CCCCCCCh
Q 011005 362 SSNRTLLAGTYGYIAPELAYTMVM-TEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQ--RLPPPVDR 438 (496)
Q Consensus 362 ~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 438 (496)
. .....+||+.|+|||++.+..+ +.++||||+|+++|+|++|+.||+...... ........ ..+...
T Consensus 162 ~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~-------~~~~i~~~~~~~p~~~-- 231 (336)
T 3h4j_B 162 N-FLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPN-------LFKKVNSCVYVMPDFL-- 231 (336)
T ss_dssp B-TTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTT-------CBCCCCSSCCCCCTTS--
T ss_pred c-ccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHH-------HHHHHHcCCCCCcccC--
Confidence 2 2344679999999999998876 689999999999999999999997432110 00001111 111111
Q ss_pred hHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCC
Q 011005 439 KVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTP 479 (496)
Q Consensus 439 ~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~ 479 (496)
...+.+++.+||+.||.+|||++|+++|+|+....+
T Consensus 232 -----s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~~~~~ 267 (336)
T 3h4j_B 232 -----SPGAQSLIRRMIVADPMQRITIQEIRRDPWFNVNLP 267 (336)
T ss_dssp -----CHHHHHHHHTTSCSSGGGSCCHHHHTTCHHHHTTCC
T ss_pred -----CHHHHHHHHHHcCCChhHCcCHHHHHhChhhccCCc
Confidence 124678999999999999999999999999987654
No 41
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.2e-45 Score=356.86 Aligned_cols=260 Identities=25% Similarity=0.312 Sum_probs=211.6
Q ss_pred HHhCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchhH-----HHHHHHHHHHHHHHhhcccccccccceeecCCe
Q 011005 203 ATEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEEL-----AFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKC 276 (496)
Q Consensus 203 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-----~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 276 (496)
..++|.+.+.||+|+||.||+|..+ +++.||+|.+...... ...+.+.+|+.++++++||||+++++++..+..
T Consensus 9 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 88 (326)
T 2y0a_A 9 VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTD 88 (326)
T ss_dssp HHHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred cccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCE
Confidence 3467999999999999999999765 6899999998754311 124678899999999999999999999999999
Q ss_pred EEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCC----CeEEccc
Q 011005 277 MFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKL----EAFVADF 352 (496)
Q Consensus 277 ~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~----~~kl~Df 352 (496)
.++||||+++|+|.+++.... .+++..++.++.||+.||.||| +.+|+||||||+||+++.++ .+||+||
T Consensus 89 ~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Df 162 (326)
T 2y0a_A 89 VILILELVAGGELFDFLAEKE---SLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDF 162 (326)
T ss_dssp EEEEEECCCSCBHHHHHTTSS---CCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESCSSSSSCCEEECCC
T ss_pred EEEEEEcCCCCCHHHHHHhcC---CcCHHHHHHHHHHHHHHHHHHH---HCCeEcCCCCHHHEEEecCCCCCCCEEEEEC
Confidence 999999999999999997543 6899999999999999999999 77999999999999999887 7999999
Q ss_pred cccccccCCCCCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCC
Q 011005 353 GTARLLHADSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRL 432 (496)
Q Consensus 353 g~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (496)
|+++...... ......||+.|+|||++.+..++.++||||+|+++|+|++|+.||.... .............
T Consensus 163 g~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~-------~~~~~~~~~~~~~ 234 (326)
T 2y0a_A 163 GLAHKIDFGN-EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT-------KQETLANVSAVNY 234 (326)
T ss_dssp TTCEECCTTS-CCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSS-------HHHHHHHHHHTCC
T ss_pred CCCeECCCCC-ccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCC-------HHHHHHHHHhcCC
Confidence 9998765332 2334579999999999999999999999999999999999999985321 1112222222221
Q ss_pred CCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhcc
Q 011005 433 PPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRK 477 (496)
Q Consensus 433 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~ 477 (496)
..+ ..........+.+++.+||+.||++|||+.|+++|+|+...
T Consensus 235 ~~~-~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~ 278 (326)
T 2y0a_A 235 EFE-DEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPK 278 (326)
T ss_dssp CCC-HHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHSTTTSCC
T ss_pred CcC-ccccccCCHHHHHHHHHHccCChhhCCCHHHHhcCCCccCC
Confidence 111 11111122357799999999999999999999999999754
No 42
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=2.9e-45 Score=358.09 Aligned_cols=261 Identities=24% Similarity=0.383 Sum_probs=212.4
Q ss_pred hCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccch--hHHHHHHHHHHHHHHHhh-cccccccccceeecCCeEEEE
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQV-LHRNIVKLYGYCLHKKCMFLI 280 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lV 280 (496)
++|++.+.||+|+||.||+|..+ +++.||+|++.... .....+.+.+|..+++++ +||||+++++++...+..++|
T Consensus 9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv 88 (345)
T 3a8x_A 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV 88 (345)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEE
Confidence 57999999999999999999765 68899999997643 233456788999999988 899999999999999999999
Q ss_pred EEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccC
Q 011005 281 YEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHA 360 (496)
Q Consensus 281 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 360 (496)
|||+++|+|.+++.... .+++..++.++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+++....
T Consensus 89 ~e~~~gg~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~ 162 (345)
T 3a8x_A 89 IEYVNGGDLMFHMQRQR---KLPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR 162 (345)
T ss_dssp ECCCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCGGGCBCSCC
T ss_pred EeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEECCCCCEEEEeccccccccC
Confidence 99999999999997643 6899999999999999999999 77999999999999999999999999999986544
Q ss_pred CCCCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCC--CCCcchhHhhhcCCCCCCCCh
Q 011005 361 DSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSS--SDPKIMLIDVLDQRLPPPVDR 438 (496)
Q Consensus 361 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 438 (496)
........+||+.|+|||++.+..++.++||||+||++|||++|+.||......... .........+.......+..
T Consensus 163 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~- 241 (345)
T 3a8x_A 163 PGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRS- 241 (345)
T ss_dssp TTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCCCCCTT-
T ss_pred CCCcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCCCCCCC-
Confidence 444455678999999999999999999999999999999999999999643221111 11111222223333222211
Q ss_pred hHHHHHHHHHHHHHhcccCCCCCCCCH------HHHHHHHHHhc
Q 011005 439 KVIRDILLISTVSFACLQSNPKSRPTM------QSVSQEFLITR 476 (496)
Q Consensus 439 ~~~~~~~~l~~li~~cl~~dP~~Rps~------~evl~~~~~~~ 476 (496)
....+.+++.+||+.||++||++ +|+++|+|+..
T Consensus 242 ----~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~hp~f~~ 281 (345)
T 3a8x_A 242 ----LSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRN 281 (345)
T ss_dssp ----SCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTSGGGTT
T ss_pred ----CCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcCCccCC
Confidence 12246789999999999999995 89999999864
No 43
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=6.2e-45 Score=351.72 Aligned_cols=251 Identities=27% Similarity=0.386 Sum_probs=211.1
Q ss_pred hCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchh--HHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEE
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEE--LAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIY 281 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~ 281 (496)
++|++.+.||+|+||.||+|..+ +|+.||+|.+..... ....+.+.+|+.+++.++||||+++++++.+....++||
T Consensus 6 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~ 85 (318)
T 1fot_A 6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM 85 (318)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEE
Confidence 67999999999999999999765 689999999976431 223466789999999999999999999999999999999
Q ss_pred EecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCC
Q 011005 282 EYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHAD 361 (496)
Q Consensus 282 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 361 (496)
||++||+|.+++.... .+++..+..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++....
T Consensus 86 e~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~- 158 (318)
T 1fot_A 86 DYIEGGELFSLLRKSQ---RFPNPVAKFYAAEVCLALEYLH---SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPD- 158 (318)
T ss_dssp CCCCSCBHHHHHHHTS---SCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECTTSCEEECCCSSCEECSS-
T ss_pred eCCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChheEEEcCCCCEEEeecCcceecCC-
Confidence 9999999999998654 6899999999999999999999 78999999999999999999999999999987543
Q ss_pred CCCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHH
Q 011005 362 SSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVI 441 (496)
Q Consensus 362 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (496)
.....+||+.|+|||++.+..++.++||||+|+++|||++|+.||... ........+.......+..
T Consensus 159 --~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~-------~~~~~~~~i~~~~~~~p~~---- 225 (318)
T 1fot_A 159 --VTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDS-------NTMKTYEKILNAELRFPPF---- 225 (318)
T ss_dssp --CBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCS-------SHHHHHHHHHHCCCCCCTT----
T ss_pred --ccccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCC-------CHHHHHHHHHhCCCCCCCC----
Confidence 233467999999999999999999999999999999999999999632 1222333333333322211
Q ss_pred HHHHHHHHHHHhcccCCCCCCC-----CHHHHHHHHHHhc
Q 011005 442 RDILLISTVSFACLQSNPKSRP-----TMQSVSQEFLITR 476 (496)
Q Consensus 442 ~~~~~l~~li~~cl~~dP~~Rp-----s~~evl~~~~~~~ 476 (496)
....+.+++.+||+.||++|| +++|+++|+|+..
T Consensus 226 -~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~hp~f~~ 264 (318)
T 1fot_A 226 -FNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKE 264 (318)
T ss_dssp -SCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTSGGGSS
T ss_pred -CCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhcCccccC
Confidence 112467899999999999999 9999999999864
No 44
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=1.9e-45 Score=356.79 Aligned_cols=273 Identities=33% Similarity=0.515 Sum_probs=218.4
Q ss_pred HHHHHHHhCCCCcceeeecCCeeEEEEEeCCCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeE
Q 011005 198 EDLIEATEDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCM 277 (496)
Q Consensus 198 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 277 (496)
.++..++++|++.+.||+|+||+||+|.+++++.||+|++..... ...+.+.+|+.+++.++||||+++++++...+..
T Consensus 32 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 110 (321)
T 2qkw_B 32 VDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESS-QGIEEFETEIETLSFCRHPHLVSLIGFCDERNEM 110 (321)
T ss_dssp SCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCS-SHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCC
T ss_pred HHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccCh-HHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeE
Confidence 344456789999999999999999999988899999999876542 2346789999999999999999999999999999
Q ss_pred EEEEEecCCCChhhhhhCCCC-CccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccc
Q 011005 278 FLIYEYMERGSLFCNLHNNED-AVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTAR 356 (496)
Q Consensus 278 ~lV~e~~~~g~L~~~l~~~~~-~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~ 356 (496)
++||||+++|+|.+++..... ...+++..++.++.|++.||+||| +.+++||||||+||+++.++.+||+|||+++
T Consensus 111 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~ 187 (321)
T 2qkw_B 111 ILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISK 187 (321)
T ss_dssp EEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCSTTEEECTTCCEEECCCTTCE
T ss_pred EEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhc---CCCeecCCCCHHHEEECCCCCEEEeeccccc
Confidence 999999999999999976532 235899999999999999999999 6799999999999999999999999999998
Q ss_pred cccCCCC--CccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchh--------Hh
Q 011005 357 LLHADSS--NRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIML--------ID 426 (496)
Q Consensus 357 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~--------~~ 426 (496)
....... ......||+.|+|||++.+..++.++||||||+++|||++|+.||................ ..
T Consensus 188 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (321)
T 2qkw_B 188 KGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQ 267 (321)
T ss_dssp ECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCS
T ss_pred ccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHHH
Confidence 6543222 2234568999999999999999999999999999999999999986433211100000000 00
Q ss_pred hhcCCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhcc
Q 011005 427 VLDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRK 477 (496)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~ 477 (496)
..+...... ........+.+++.+||+.||++|||+.|+++++....+
T Consensus 268 ~~~~~~~~~---~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~ 315 (321)
T 2qkw_B 268 IVDPNLADK---IRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALR 315 (321)
T ss_dssp SSSSSCTTC---SCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred hcChhhccc---cCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhh
Confidence 111111111 123445568899999999999999999999999987654
No 45
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=1.3e-45 Score=360.09 Aligned_cols=256 Identities=23% Similarity=0.361 Sum_probs=211.7
Q ss_pred HHhCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchh--HHHHHHHHHHHHHHHhh-cccccccccceeecCCeEE
Q 011005 203 ATEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEE--LAFIKSFKNEAQVLSQV-LHRNIVKLYGYCLHKKCMF 278 (496)
Q Consensus 203 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~ 278 (496)
..++|.+.+.||+|+||.||+|.++ +++.||+|.++.... ......+..|..+++.+ +||||+++++++...+..+
T Consensus 15 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~ 94 (345)
T 1xjd_A 15 KIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLF 94 (345)
T ss_dssp -CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEE
T ss_pred ChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEE
Confidence 4578999999999999999999875 689999999976431 22345678899999887 8999999999999999999
Q ss_pred EEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccc
Q 011005 279 LIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLL 358 (496)
Q Consensus 279 lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 358 (496)
+||||++||+|.+++.... .+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+++..
T Consensus 95 lv~E~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~ 168 (345)
T 1xjd_A 95 FVMEYLNGGDLMYHIQSCH---KFDLSRATFYAAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKEN 168 (345)
T ss_dssp EEEECCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred EEEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCChhhEEECCCCCEEEeEChhhhhc
Confidence 9999999999999997643 6899999999999999999999 779999999999999999999999999999865
Q ss_pred cCCCCCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCCh
Q 011005 359 HADSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDR 438 (496)
Q Consensus 359 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (496)
..........+||+.|+|||++.+..++.++||||+|+++|||++|+.||.... .......+.......+..
T Consensus 169 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~-------~~~~~~~i~~~~~~~p~~- 240 (345)
T 1xjd_A 169 MLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQD-------EEELFHSIRMDNPFYPRW- 240 (345)
T ss_dssp CCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS-------HHHHHHHHHHCCCCCCTT-
T ss_pred ccCCCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCC-------HHHHHHHHHhCCCCCCcc-
Confidence 444444556789999999999999999999999999999999999999996321 122222222222221110
Q ss_pred hHHHHHHHHHHHHHhcccCCCCCCCCHH-HHHHHHHHhc
Q 011005 439 KVIRDILLISTVSFACLQSNPKSRPTMQ-SVSQEFLITR 476 (496)
Q Consensus 439 ~~~~~~~~l~~li~~cl~~dP~~Rps~~-evl~~~~~~~ 476 (496)
....+.+++.+||+.||++||++. |+++|+|+..
T Consensus 241 ----~s~~~~~li~~lL~~dp~~R~~~~~~i~~hp~f~~ 275 (345)
T 1xjd_A 241 ----LEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFRE 275 (345)
T ss_dssp ----SCHHHHHHHHHHSCSSGGGSBTTBSCGGGSGGGTT
T ss_pred ----cCHHHHHHHHHHhcCCHhHcCCChHHHHcCccccC
Confidence 112467899999999999999998 9999999864
No 46
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=1.1e-45 Score=352.84 Aligned_cols=266 Identities=26% Similarity=0.324 Sum_probs=202.6
Q ss_pred hCCCCcceeeecCCeeEEEEEeCCCcEEEEEEcccchh-HHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEe
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEE-LAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEY 283 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~ 283 (496)
++|++.+.||+|+||+||+|...+++.||+|++..... ....+.+.+|+.++++++||||+++++++..++..++||||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence 47889999999999999999888899999999865432 22335678999999999999999999999999999999999
Q ss_pred cCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCC
Q 011005 284 MERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSS 363 (496)
Q Consensus 284 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 363 (496)
+++ +|.+++.... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.......
T Consensus 82 ~~~-~l~~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 155 (288)
T 1ob3_A 82 LDQ-DLKKLLDVCE--GGLESVTAKSFLLQLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVR 155 (288)
T ss_dssp CSE-EHHHHHHTST--TCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC---
T ss_pred cCC-CHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCCEEEeECccccccCcccc
Confidence 985 8988887643 26889999999999999999999 67999999999999999999999999999987754444
Q ss_pred CccccccccccccccccccC-CcCcccchhhHHHHHHHHHhCCCCCccccccC----------C---CCCCcchhHhhhc
Q 011005 364 NRTLLAGTYGYIAPELAYTM-VMTEKCDVYSFGVVTLEVLMGKHPRDILSSLS----------S---SSDPKIMLIDVLD 429 (496)
Q Consensus 364 ~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~el~~g~~p~~~~~~~~----------~---~~~~~~~~~~~~~ 429 (496)
......+|+.|+|||++.+. .++.++||||+|+++|+|++|+.||....... . ...+........+
T Consensus 156 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (288)
T 1ob3_A 156 KYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYD 235 (288)
T ss_dssp ------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCC
T ss_pred ccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhcccccc
Confidence 44456789999999998764 58999999999999999999999996432100 0 0000000000000
Q ss_pred CCCC----CCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhc
Q 011005 430 QRLP----PPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITR 476 (496)
Q Consensus 430 ~~~~----~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~ 476 (496)
.... .+...........+.+++.+||+.||++|||++|+++|+|+..
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~ 286 (288)
T 1ob3_A 236 PNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE 286 (288)
T ss_dssp TTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGGC
T ss_pred cccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcCcchhh
Confidence 0000 0000000011234678999999999999999999999999864
No 47
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=8.9e-45 Score=351.75 Aligned_cols=265 Identities=22% Similarity=0.296 Sum_probs=212.2
Q ss_pred hCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCC--eEEEEE
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKK--CMFLIY 281 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~--~~~lV~ 281 (496)
++|.+.+.||+|+||+||+|.+. +++.||||++.........+.+.+|++++++++||||+++++++.... ..++||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (319)
T 4euu_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (319)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEE
Confidence 57899999999999999999775 589999999987554444567789999999999999999999987755 789999
Q ss_pred EecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEe----cCCCCeEEcccccccc
Q 011005 282 EYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILL----NSKLEAFVADFGTARL 357 (496)
Q Consensus 282 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~----~~~~~~kl~Dfg~~~~ 357 (496)
||+++|+|.+++........+++..++.++.||+.||+||| +.+|+||||||+||++ +.++.+||+|||+++.
T Consensus 89 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~ 165 (319)
T 4euu_A 89 EFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARE 165 (319)
T ss_dssp ECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEECTTSCEEEEECCCTTCEE
T ss_pred eCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEEeccCCCCceEEEccCCCcee
Confidence 99999999999987654445899999999999999999999 7799999999999999 7788899999999987
Q ss_pred ccCCCCCccccccccccccccccc--------cCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhc
Q 011005 358 LHADSSNRTLLAGTYGYIAPELAY--------TMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLD 429 (496)
Q Consensus 358 ~~~~~~~~~~~~gt~~y~aPE~~~--------~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 429 (496)
..... ......||+.|+|||++. +..++.++||||||+++|||++|+.||....... ...........
T Consensus 166 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~---~~~~~~~~~~~ 241 (319)
T 4euu_A 166 LEDDE-QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPR---RNKEVMYKIIT 241 (319)
T ss_dssp CCTTC-CBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGG---GCHHHHHHHHH
T ss_pred cCCCC-ceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccc---hhHHHHHHHhc
Confidence 65433 233457999999999986 5788999999999999999999999997432211 11111111111
Q ss_pred CC---------------------CCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhcc
Q 011005 430 QR---------------------LPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRK 477 (496)
Q Consensus 430 ~~---------------------~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~ 477 (496)
.. .+.. ..........+.+++.+||+.||++|||++|+++|+.....
T Consensus 242 ~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~~ 309 (319)
T 4euu_A 242 GKPSGAISGVQKAENGPIDWSGDMPVS-CSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILH 309 (319)
T ss_dssp HCCTTCCEEEECSTTCCEEEESSCCTT-CSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHTC
T ss_pred CCCcccchhhhcccCCccccCccCCcc-cccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHhh
Confidence 11 1111 11123344467899999999999999999999999986544
No 48
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=3.8e-45 Score=353.86 Aligned_cols=274 Identities=20% Similarity=0.259 Sum_probs=196.7
Q ss_pred HhCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEE
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYE 282 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e 282 (496)
.++|++.+.||+|+||+||+|..+ +++.||+|.+.........+.+.+|+.++++++||||+++++++..++..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 83 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFE 83 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEE
Confidence 468999999999999999999765 6899999999765433334667899999999999999999999999999999999
Q ss_pred ecCCCChhhhhhCCC---CCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEcccccccccc
Q 011005 283 YMERGSLFCNLHNNE---DAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLH 359 (496)
Q Consensus 283 ~~~~g~L~~~l~~~~---~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 359 (496)
|++ |+|.+++.... ....+++..+..++.||+.||.||| +.||+||||||+||+++.++.+||+|||+++...
T Consensus 84 ~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 159 (317)
T 2pmi_A 84 FMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCH---ENKILHRDLKPQNLLINKRGQLKLGDFGLARAFG 159 (317)
T ss_dssp CCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCSSCEETT
T ss_pred ecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCChHHeEEcCCCCEEECcCccceecC
Confidence 998 59988876431 2235899999999999999999999 7799999999999999999999999999998775
Q ss_pred CCCCCccccccccccccccccccC-CcCcccchhhHHHHHHHHHhCCCCCccccccC----------CCCC-CcchhHh-
Q 011005 360 ADSSNRTLLAGTYGYIAPELAYTM-VMTEKCDVYSFGVVTLEVLMGKHPRDILSSLS----------SSSD-PKIMLID- 426 (496)
Q Consensus 360 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~el~~g~~p~~~~~~~~----------~~~~-~~~~~~~- 426 (496)
..........||+.|+|||++.+. .++.++||||+|+++|+|++|+.||....... .... .......
T Consensus 160 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 239 (317)
T 2pmi_A 160 IPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKL 239 (317)
T ss_dssp SCCCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGGGC
T ss_pred CCcccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhhhhh
Confidence 544444556789999999998764 68999999999999999999999996432100 0000 0000000
Q ss_pred -hhcCCC----CCCCChh-----HHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCCCC
Q 011005 427 -VLDQRL----PPPVDRK-----VIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTPLV 481 (496)
Q Consensus 427 -~~~~~~----~~~~~~~-----~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~~~ 481 (496)
...... +...... .......+.+|+.+||+.||++|||++|+++|+|+.......
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~~~ 304 (317)
T 2pmi_A 240 PKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWFAEYYHHA 304 (317)
T ss_dssp TTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGCC--
T ss_pred hhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCChhhhcccchh
Confidence 000000 0000000 000122578999999999999999999999999998765543
No 49
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=1.9e-45 Score=358.94 Aligned_cols=259 Identities=21% Similarity=0.307 Sum_probs=209.4
Q ss_pred HHhCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchhHHHHHHHHHHHHHHHhh-cccccccccceeecCCeEEEE
Q 011005 203 ATEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFKNEAQVLSQV-LHRNIVKLYGYCLHKKCMFLI 280 (496)
Q Consensus 203 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lV 280 (496)
..++|++.+.||+|+||.||+|.++ +++.||+|.+..... ...+|++++.++ +||||+++++++.+++..++|
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~-----~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv 94 (342)
T 2qr7_A 20 FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR-----DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVV 94 (342)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC-----CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEE
T ss_pred ccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC-----ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEE
Confidence 5678999999999999999999765 688999999976542 235788888888 799999999999999999999
Q ss_pred EEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCC----CCeEEccccccc
Q 011005 281 YEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSK----LEAFVADFGTAR 356 (496)
Q Consensus 281 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~----~~~kl~Dfg~~~ 356 (496)
|||++||+|.+.+.... .+++..+..++.||+.||+||| +.||+||||||+||++.++ +.+||+|||+++
T Consensus 95 ~E~~~gg~L~~~i~~~~---~~~~~~~~~~~~qi~~al~~lH---~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~ 168 (342)
T 2qr7_A 95 TELMKGGELLDKILRQK---FFSEREASAVLFTITKTVEYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAK 168 (342)
T ss_dssp ECCCCSCBHHHHHHTCT---TCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCE
T ss_pred EeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---HCCcEeccCCHHHEEEecCCCCcCeEEEEECCCcc
Confidence 99999999999998654 6899999999999999999999 7799999999999998543 359999999998
Q ss_pred cccCCCCCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCC
Q 011005 357 LLHADSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPV 436 (496)
Q Consensus 357 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (496)
............+||+.|+|||++.+..++.++||||+|+++|+|++|+.||.... ..........+.........
T Consensus 169 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~----~~~~~~~~~~i~~~~~~~~~ 244 (342)
T 2qr7_A 169 QLRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGP----DDTPEEILARIGSGKFSLSG 244 (342)
T ss_dssp ECBCTTCCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSST----TSCHHHHHHHHHHCCCCCCS
T ss_pred cCcCCCCceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCC----cCCHHHHHHHHccCCcccCc
Confidence 87655545556789999999999998889999999999999999999999996321 11112222222222222111
Q ss_pred ChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhcc
Q 011005 437 DRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRK 477 (496)
Q Consensus 437 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~ 477 (496)
..+......+.+|+.+||+.||++|||+.|+++|+|+...
T Consensus 245 -~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~hp~~~~~ 284 (342)
T 2qr7_A 245 -GYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHPWIVHW 284 (342)
T ss_dssp -TTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHHHHTG
T ss_pred -cccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCCeecCc
Confidence 0011112347789999999999999999999999999754
No 50
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=4.1e-45 Score=355.08 Aligned_cols=255 Identities=26% Similarity=0.354 Sum_probs=201.5
Q ss_pred HhCCCCcceeeecCCeeEEEEEe----CCCcEEEEEEcccch---hHHHHHHHHHHHHHHHhhcccccccccceeecCCe
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQL----PNGKVFALKKLHTSE---ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKC 276 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 276 (496)
.++|++.+.||+|+||.||+|.. .+++.||+|+++... .......+.+|+.+++.++||||+++++++...+.
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 95 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK 95 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence 46799999999999999999976 478999999997643 22234567899999999999999999999999999
Q ss_pred EEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccc
Q 011005 277 MFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTAR 356 (496)
Q Consensus 277 ~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~ 356 (496)
.++||||+++|+|.+++.... .+++..+..++.||+.||.||| +.+|+||||||+||+++.++.+||+|||+++
T Consensus 96 ~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~al~~lH---~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~ 169 (327)
T 3a62_A 96 LYLILEYLSGGELFMQLEREG---IFMEDTACFYLAEISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCK 169 (327)
T ss_dssp EEEEEECCTTEEHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCTTTEEECTTSCEEECCCSCC-
T ss_pred EEEEEeCCCCCcHHHHHHhCC---CCCHHHHHHHHHHHHHHHHHHH---hCCEEcccCCHHHeEECCCCcEEEEeCCccc
Confidence 999999999999999997643 6889999999999999999999 6799999999999999999999999999998
Q ss_pred cccCCCCCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCC
Q 011005 357 LLHADSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPV 436 (496)
Q Consensus 357 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (496)
............+||+.|+|||++.+..++.++||||+|+++|+|++|+.||.... .......+.......+.
T Consensus 170 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~-------~~~~~~~i~~~~~~~p~ 242 (327)
T 3a62_A 170 ESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGEN-------RKKTIDKILKCKLNLPP 242 (327)
T ss_dssp ---------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSS-------HHHHHHHHHHTCCCCCT
T ss_pred ccccCCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCC-------HHHHHHHHHhCCCCCCC
Confidence 65444444445679999999999999999999999999999999999999996321 22222333333322211
Q ss_pred ChhHHHHHHHHHHHHHhcccCCCCCCC-----CHHHHHHHHHHhc
Q 011005 437 DRKVIRDILLISTVSFACLQSNPKSRP-----TMQSVSQEFLITR 476 (496)
Q Consensus 437 ~~~~~~~~~~l~~li~~cl~~dP~~Rp-----s~~evl~~~~~~~ 476 (496)
. ....+.+++.+||+.||++|| ++.|+++|+|+..
T Consensus 243 ~-----~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~hp~f~~ 282 (327)
T 3a62_A 243 Y-----LTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRH 282 (327)
T ss_dssp T-----SCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHSGGGSS
T ss_pred C-----CCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcCCcccC
Confidence 1 112467899999999999999 8899999999864
No 51
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=3.8e-45 Score=359.92 Aligned_cols=262 Identities=21% Similarity=0.310 Sum_probs=201.8
Q ss_pred HhCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEE
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYE 282 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e 282 (496)
.++|++.+.||+|+||+||+|... +++.||+|++...... .+.+.+|+.+++.++||||+++++++..+...++|||
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 96 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAI--DENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIME 96 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTS--CHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCccc--cHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEE
Confidence 468999999999999999999775 7899999999764422 2567899999999999999999999999999999999
Q ss_pred ecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCC--eEEccccccccccC
Q 011005 283 YMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLE--AFVADFGTARLLHA 360 (496)
Q Consensus 283 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~--~kl~Dfg~~~~~~~ 360 (496)
|+++|+|.+++.... .+++..++.++.|++.||+||| ++||+||||||+||+++.++. +||+|||+++....
T Consensus 97 ~~~~~~L~~~l~~~~---~~~~~~~~~i~~ql~~~L~~LH---~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~ 170 (361)
T 3uc3_A 97 YASGGELYERICNAG---RFSEDEARFFFQQLLSGVSYCH---SMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVL 170 (361)
T ss_dssp CCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHH---HTTCCSCCCCGGGEEECSSSSCCEEECCCCCC-----
T ss_pred eCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEcCCCCceEEEeecCccccccc
Confidence 999999999987543 6899999999999999999999 779999999999999987765 99999999975432
Q ss_pred CCCCccccccccccccccccccCCcCcc-cchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChh
Q 011005 361 DSSNRTLLAGTYGYIAPELAYTMVMTEK-CDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRK 439 (496)
Q Consensus 361 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 439 (496)
. ......+||+.|+|||++.+..++.+ +||||+|+++|+|++|+.||..... ..................+....
T Consensus 171 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 246 (361)
T 3uc3_A 171 H-SQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEE---PRDYRKTIQRILSVKYSIPDDIR 246 (361)
T ss_dssp -----------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC-------CCCHHHHHHHHHTTCCCCCTTSC
T ss_pred c-CCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCcc---HHHHHHHHHHHhcCCCCCCCcCC
Confidence 2 22334579999999999988888765 8999999999999999999974321 11111122222222222111110
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCCC
Q 011005 440 VIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTPL 480 (496)
Q Consensus 440 ~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~~ 480 (496)
....+.+|+.+||+.||++|||+.|+++|+|+.+..+.
T Consensus 247 ---~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f~~~~~~ 284 (361)
T 3uc3_A 247 ---ISPECCHLISRIFVADPATRISIPEIKTHSWFLKNLPA 284 (361)
T ss_dssp ---CCHHHHHHHHHHSCSCTTTSCCHHHHHTSHHHHTTCCC
T ss_pred ---CCHHHHHHHHHHccCChhHCcCHHHHHhCcchhcCCch
Confidence 11246789999999999999999999999999776544
No 52
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=1.3e-44 Score=357.36 Aligned_cols=258 Identities=22% Similarity=0.362 Sum_probs=209.8
Q ss_pred HhCCCCcceeeecCCeeEEEEEe--------CCCcEEEEEEcccchhHHHHHHHHHHHHHHHhh-cccccccccceeecC
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQL--------PNGKVFALKKLHTSEELAFIKSFKNEAQVLSQV-LHRNIVKLYGYCLHK 274 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~--------~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~ 274 (496)
.++|++.+.||+|+||.||+|.+ .++..||||.++........+.+.+|+.+++++ +||||+++++++...
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 159 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 159 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence 36789999999999999999975 245679999998765555667899999999999 899999999999999
Q ss_pred CeEEEEEEecCCCChhhhhhCCCC-------------CccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEe
Q 011005 275 KCMFLIYEYMERGSLFCNLHNNED-------------AVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILL 341 (496)
Q Consensus 275 ~~~~lV~e~~~~g~L~~~l~~~~~-------------~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~ 341 (496)
+..++||||+++|+|.+++..... ...+++..++.++.||+.||+||| .++|+||||||+|||+
T Consensus 160 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll 236 (370)
T 2psq_A 160 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLV 236 (370)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEE
T ss_pred CCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCeeccccchhhEEE
Confidence 999999999999999999976432 235899999999999999999999 7799999999999999
Q ss_pred cCCCCeEEccccccccccCCCC--CccccccccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccCCCC
Q 011005 342 NSKLEAFVADFGTARLLHADSS--NRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSS 418 (496)
Q Consensus 342 ~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~ 418 (496)
+.++.+||+|||+++....... ......+|+.|+|||++.+..++.++||||||+++|||++ |+.||....
T Consensus 237 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~------ 310 (370)
T 2psq_A 237 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP------ 310 (370)
T ss_dssp CTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC------
T ss_pred CCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCC------
Confidence 9999999999999987654322 1233457789999999999999999999999999999999 999986321
Q ss_pred CCcchhHhhhcCCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHh
Q 011005 419 DPKIMLIDVLDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLIT 475 (496)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~ 475 (496)
.............. .... .....+.+++.+||+.||++|||+.|+++++...
T Consensus 311 -~~~~~~~~~~~~~~-~~~~---~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~i 362 (370)
T 2psq_A 311 -VEELFKLLKEGHRM-DKPA---NCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 362 (370)
T ss_dssp -GGGHHHHHHTTCCC-CCCT---TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred -HHHHHHHHhcCCCC-CCCC---CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 11122222222111 1111 1122477899999999999999999999998654
No 53
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=7.8e-45 Score=352.79 Aligned_cols=261 Identities=25% Similarity=0.383 Sum_probs=209.3
Q ss_pred hCCCCcceeeecCCeeEEEEEeC----CCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEE
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLP----NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLI 280 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV 280 (496)
++|.+.+.||+|+||+||+|.+. .+..||||.++........+.+.+|+.++++++||||+++++++..++..++|
T Consensus 49 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 128 (325)
T 3kul_A 49 SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIV 128 (325)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEEE
T ss_pred hHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEEE
Confidence 57888999999999999999874 45569999998765555567899999999999999999999999999999999
Q ss_pred EEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccC
Q 011005 281 YEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHA 360 (496)
Q Consensus 281 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 360 (496)
|||+++|+|.+++.... ..+++..++.++.|++.||.||| +.+|+||||||+||+++.++.+||+|||+++....
T Consensus 129 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 203 (325)
T 3kul_A 129 TEYMENGSLDTFLRTHD--GQFTIMQLVGMLRGVGAGMRYLS---DLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLED 203 (325)
T ss_dssp EECCTTCBHHHHHHTTT--TCSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCSSCEECC-
T ss_pred eeCCCCCcHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCcceEEECCCCCEEECCCCccccccc
Confidence 99999999999997543 26899999999999999999999 77999999999999999999999999999987754
Q ss_pred CCCC---ccccccccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccCCCCCCcchhHhhhcCCCCCCC
Q 011005 361 DSSN---RTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPV 436 (496)
Q Consensus 361 ~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (496)
.... .....+|+.|+|||++.+..++.++||||||+++|+|++ |+.||.... ........... ...+.
T Consensus 204 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~-------~~~~~~~~~~~-~~~~~ 275 (325)
T 3kul_A 204 DPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMT-------NRDVISSVEEG-YRLPA 275 (325)
T ss_dssp ---CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSC-------HHHHHHHHHTT-CCCCC
T ss_pred CccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCC-------HHHHHHHHHcC-CCCCC
Confidence 3322 122345778999999999999999999999999999999 999986321 11122222222 11111
Q ss_pred ChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCCCC
Q 011005 437 DRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTPLV 481 (496)
Q Consensus 437 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~~~ 481 (496)
.. .....+.+++.+||+.||++|||+.|+++.+....+.+..
T Consensus 276 ~~---~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~~~ 317 (325)
T 3kul_A 276 PM---GCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSPES 317 (325)
T ss_dssp CT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSCC-
T ss_pred CC---CcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCccc
Confidence 11 1123477899999999999999999999999887665543
No 54
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=3.4e-45 Score=358.17 Aligned_cols=255 Identities=21% Similarity=0.328 Sum_probs=212.6
Q ss_pred HhCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccch--hHHHHHHHHHHHHHHHhh-cccccccccceeecCCeEEE
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQV-LHRNIVKLYGYCLHKKCMFL 279 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~l 279 (496)
.++|++.+.||+|+||.||+|..+ +++.||+|+++... .......+.+|..+++.+ +||+|+++++++...+..++
T Consensus 19 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l 98 (353)
T 2i0e_A 19 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYF 98 (353)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEE
Confidence 468999999999999999999876 47899999997643 223345678899999888 79999999999999999999
Q ss_pred EEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEcccccccccc
Q 011005 280 IYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLH 359 (496)
Q Consensus 280 V~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 359 (496)
||||++||+|.+++.... .+++..++.++.||+.||+||| +.||+||||||+|||++.++.+||+|||+++...
T Consensus 99 v~E~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~ 172 (353)
T 2i0e_A 99 VMEYVNGGDLMYHIQQVG---RFKEPHAVFYAAEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENI 172 (353)
T ss_dssp EEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCC
T ss_pred EEeCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---HCCEEeccCCHHHEEEcCCCcEEEEeCCcccccc
Confidence 999999999999997643 6899999999999999999999 7799999999999999999999999999998654
Q ss_pred CCCCCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChh
Q 011005 360 ADSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRK 439 (496)
Q Consensus 360 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 439 (496)
.........+||+.|+|||++.+..++.++||||+|+++|||++|+.||... ........+.......+..
T Consensus 173 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~-------~~~~~~~~i~~~~~~~p~~-- 243 (353)
T 2i0e_A 173 WDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGE-------DEDELFQSIMEHNVAYPKS-- 243 (353)
T ss_dssp CTTCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCS-------SHHHHHHHHHHCCCCCCTT--
T ss_pred cCCcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCC-------CHHHHHHHHHhCCCCCCCC--
Confidence 4444455678999999999999999999999999999999999999999632 2222333333333332211
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCC-----HHHHHHHHHHhc
Q 011005 440 VIRDILLISTVSFACLQSNPKSRPT-----MQSVSQEFLITR 476 (496)
Q Consensus 440 ~~~~~~~l~~li~~cl~~dP~~Rps-----~~evl~~~~~~~ 476 (496)
....+.+++.+||+.||++||+ ++|+++|+|+..
T Consensus 244 ---~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h~~f~~ 282 (353)
T 2i0e_A 244 ---MSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRY 282 (353)
T ss_dssp ---SCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTSGGGTT
T ss_pred ---CCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCccccC
Confidence 1224678999999999999994 699999999853
No 55
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=2e-44 Score=347.79 Aligned_cols=259 Identities=27% Similarity=0.447 Sum_probs=210.0
Q ss_pred HhCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEE
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYE 282 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e 282 (496)
.++|.+.+.||+|+||+||+|.+. +++.||+|++.... ....+.+.+|++++++++||||+++++++.+++..++|||
T Consensus 9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 87 (310)
T 3s95_A 9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFD-EETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITE 87 (310)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCC-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCC-HHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEE
Confidence 367889999999999999999764 68999999886543 3345778999999999999999999999999999999999
Q ss_pred ecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCC
Q 011005 283 YMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADS 362 (496)
Q Consensus 283 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 362 (496)
|+++|+|.+++.... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++......
T Consensus 88 ~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 162 (310)
T 3s95_A 88 YIKGGTLRGIIKSMD--SQYPWSQRVSFAKDIASGMAYLH---SMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEK 162 (310)
T ss_dssp CCTTCBHHHHHHHCC--TTSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEECTTSCEEECCCTTCEECC---
T ss_pred ecCCCcHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCcCeEEECCCCCEEEeecccceeccccc
Confidence 999999999998643 26899999999999999999999 7799999999999999999999999999998764332
Q ss_pred CCc--------------cccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhh
Q 011005 363 SNR--------------TLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVL 428 (496)
Q Consensus 363 ~~~--------------~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~ 428 (496)
... ....||+.|+|||++.+..++.++||||||+++|+|++|..|+........ ..........
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~--~~~~~~~~~~ 240 (310)
T 3s95_A 163 TQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTM--DFGLNVRGFL 240 (310)
T ss_dssp -----------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCT--TSSBCHHHHH
T ss_pred ccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHH--HHhhhhhccc
Confidence 211 145799999999999999999999999999999999999999864332111 1111222222
Q ss_pred cCCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhcc
Q 011005 429 DQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRK 477 (496)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~ 477 (496)
....+.... ..+.+++.+||+.||++|||+.|+++.+...+.
T Consensus 241 ~~~~~~~~~-------~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~ 282 (310)
T 3s95_A 241 DRYCPPNCP-------PSFFPITVRCCDLDPEKRPSFVKLEHWLETLRM 282 (310)
T ss_dssp HHTCCTTCC-------TTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred cccCCCCCC-------HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 222222222 136789999999999999999999998776543
No 56
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=1.1e-44 Score=345.04 Aligned_cols=267 Identities=22% Similarity=0.336 Sum_probs=216.4
Q ss_pred HhCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccch-hHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEE
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSE-ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIY 281 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~ 281 (496)
.++|++.+.||+|+||.||+|.++ +++.||+|++.... .....+.+.+|+.++++++||||+++++++..+...++||
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 84 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 84 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence 578999999999999999999764 68999999987643 3344567889999999999999999999999999999999
Q ss_pred EecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCC---eEEccccccccc
Q 011005 282 EYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLE---AFVADFGTARLL 358 (496)
Q Consensus 282 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~---~kl~Dfg~~~~~ 358 (496)
||+++++|.+.+.... .+++..+..++.|++.||.||| +.+++||||||+||+++.++. +||+|||++...
T Consensus 85 e~~~~~~l~~~~~~~~---~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~ 158 (284)
T 3kk8_A 85 DLVTGGELFEDIVARE---FYSEADASHCIQQILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEV 158 (284)
T ss_dssp CCCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEEC
T ss_pred ecCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---HCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEc
Confidence 9999999988887643 6899999999999999999999 779999999999999986655 999999999776
Q ss_pred cCCCCCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCCh
Q 011005 359 HADSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDR 438 (496)
Q Consensus 359 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (496)
.... ......||+.|+|||.+.+..++.++||||+|+++|+|++|+.||.... ...............+...
T Consensus 159 ~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~-------~~~~~~~~~~~~~~~~~~~ 230 (284)
T 3kk8_A 159 NDSE-AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDED-------QHRLYAQIKAGAYDYPSPE 230 (284)
T ss_dssp CSSC-BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS-------HHHHHHHHHHTCCCCCTTT
T ss_pred ccCc-cccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCc-------hhHHHHHHHhccccCCchh
Confidence 4332 2344678999999999999999999999999999999999999986321 1222222222222211110
Q ss_pred hHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCCCCCccc
Q 011005 439 KVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTPLVKHAA 485 (496)
Q Consensus 439 ~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~~~~~~~ 485 (496)
.......+.+++.+||+.||++|||++|+++|+|+...........
T Consensus 231 -~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~~~~~~~ 276 (284)
T 3kk8_A 231 -WDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWICNRERVASAIH 276 (284)
T ss_dssp -TTTSCHHHHHHHHHHSCSSTTTSCCHHHHTTSHHHHSCCCGGGSCC
T ss_pred -hcccCHHHHHHHHHHcccChhhCCCHHHHhcCccccCChhHHhHhh
Confidence 0111234778999999999999999999999999988766654433
No 57
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=2.4e-45 Score=351.24 Aligned_cols=262 Identities=21% Similarity=0.275 Sum_probs=204.6
Q ss_pred hCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccch-hHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEE
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSE-ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYE 282 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e 282 (496)
++|++.+.||+|+||+||+|.+. +++.||+|++.... .......+.+|+.++++++||||+++++++..++..++|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 81 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence 47899999999999999999765 68999999997543 23344678899999999999999999999999999999999
Q ss_pred ecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCC
Q 011005 283 YMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADS 362 (496)
Q Consensus 283 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 362 (496)
|+++ ++.+.+.... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++......
T Consensus 82 ~~~~-~l~~~~~~~~--~~l~~~~~~~~~~ql~~~l~~lH---~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 155 (292)
T 3o0g_A 82 FCDQ-DLKKYFDSCN--GDLDPEIVKSFLFQLLKGLGFCH---SRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPV 155 (292)
T ss_dssp CCSE-EHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCSCC
T ss_pred cCCC-CHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeecccceecCCcc
Confidence 9986 5555554322 26899999999999999999999 6799999999999999999999999999998776555
Q ss_pred CCccccccccccccccccccCC-cCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhc------------
Q 011005 363 SNRTLLAGTYGYIAPELAYTMV-MTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLD------------ 429 (496)
Q Consensus 363 ~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~------------ 429 (496)
.......||+.|+|||++.+.. ++.++||||+|+++|+|++|..|+-.... .......+..
T Consensus 156 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~------~~~~~~~i~~~~~~~~~~~~~~ 229 (292)
T 3o0g_A 156 RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGND------VDDQLKRIFRLLGTPTEEQWPS 229 (292)
T ss_dssp SCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSS------HHHHHHHHHHHHCCCCTTTCTT
T ss_pred ccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCC------HHHHHHHHHHHhCCCChhhhhh
Confidence 5555667899999999998765 79999999999999999999888532111 0000000000
Q ss_pred -----CCCC-------CCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccC
Q 011005 430 -----QRLP-------PPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKT 478 (496)
Q Consensus 430 -----~~~~-------~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~ 478 (496)
...+ .............+.+|+.+||+.||++|||++|+++|+|+....
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~ 290 (292)
T 3o0g_A 230 MTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDFC 290 (292)
T ss_dssp GGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTC-
T ss_pred hcccccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcCcccccCC
Confidence 0000 000000001123467899999999999999999999999997643
No 58
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=3e-44 Score=364.03 Aligned_cols=256 Identities=23% Similarity=0.383 Sum_probs=213.9
Q ss_pred hCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchh--HHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEE
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEE--LAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIY 281 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~ 281 (496)
++|.+.+.||+|+||.||+|.+. +|+.||||++..... ......+.+|+.+++.++||||+++++++...+..++||
T Consensus 16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~ 95 (476)
T 2y94_A 16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVM 95 (476)
T ss_dssp TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 57999999999999999999775 799999999976432 223467899999999999999999999999999999999
Q ss_pred EecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCC
Q 011005 282 EYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHAD 361 (496)
Q Consensus 282 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 361 (496)
||+++|+|.+++.... .+++..++.++.||+.||+||| +.+|+||||||+||+++.++.+||+|||++......
T Consensus 96 E~~~gg~L~~~l~~~~---~l~~~~~~~i~~qi~~aL~~LH---~~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~ 169 (476)
T 2y94_A 96 EYVSGGELFDYICKNG---RLDEKESRRLFQQILSGVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG 169 (476)
T ss_dssp ECCSSEEHHHHTTSSS---SCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCSGGGEEECTTCCEEECCCSSCEECCTT
T ss_pred eCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---HCCCCcccccHHHEEEecCCCeEEEeccchhhcccc
Confidence 9999999999997643 6899999999999999999999 789999999999999999999999999999876543
Q ss_pred CCCccccccccccccccccccCCc-CcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhH
Q 011005 362 SSNRTLLAGTYGYIAPELAYTMVM-TEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKV 440 (496)
Q Consensus 362 ~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 440 (496)
......+||+.|+|||++.+..+ +.++||||+|+++|+|++|+.||... ........+.......+..
T Consensus 170 -~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~-------~~~~~~~~i~~~~~~~p~~--- 238 (476)
T 2y94_A 170 -EFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDD-------HVPTLFKKICDGIFYTPQY--- 238 (476)
T ss_dssp -CCBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCS-------SSHHHHHHHHTTCCCCCTT---
T ss_pred -ccccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCC-------CHHHHHHHHhcCCcCCCcc---
Confidence 23345679999999999998776 68999999999999999999999632 1222233333333222211
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCC
Q 011005 441 IRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTP 479 (496)
Q Consensus 441 ~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~ 479 (496)
....+.+|+.+||+.||++|||++|+++|+|+....+
T Consensus 239 --~s~~~~~Li~~~L~~dP~~Rpt~~eil~hp~~~~~~~ 275 (476)
T 2y94_A 239 --LNPSVISLLKHMLQVDPMKRATIKDIREHEWFKQDLP 275 (476)
T ss_dssp --CCHHHHHHHHHHTCSSTTTSCCHHHHHTCHHHHTTCC
T ss_pred --CCHHHHHHHHHHcCCCchhCcCHHHHHhCHHhhhcCc
Confidence 1124678999999999999999999999999987654
No 59
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=6.2e-45 Score=356.83 Aligned_cols=261 Identities=25% Similarity=0.320 Sum_probs=197.7
Q ss_pred HHhCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEE
Q 011005 203 ATEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIY 281 (496)
Q Consensus 203 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~ 281 (496)
..++|++.+.||+|+||.||+|.++ +++.||||.+..... .+.+.+|+.++++++||||+++++++..+...++||
T Consensus 51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 127 (349)
T 2w4o_A 51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVD---KKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVL 127 (349)
T ss_dssp GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC-------------CHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccchh---HHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEE
Confidence 3567999999999999999999876 588999999976542 356789999999999999999999999999999999
Q ss_pred EecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecC---CCCeEEccccccccc
Q 011005 282 EYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNS---KLEAFVADFGTARLL 358 (496)
Q Consensus 282 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~---~~~~kl~Dfg~~~~~ 358 (496)
||+++|+|.+++.... .+++..++.++.|++.||.||| +.+|+||||||+||+++. ++.+||+|||+++..
T Consensus 128 e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~ 201 (349)
T 2w4o_A 128 ELVTGGELFDRIVEKG---YYSERDAADAVKQILEAVAYLH---ENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIV 201 (349)
T ss_dssp CCCCSCBHHHHHTTCS---SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEESSSSTTCCEEECCCC-----
T ss_pred EeCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCcccEEEecCCCCCCEEEccCcccccc
Confidence 9999999999997643 6899999999999999999999 679999999999999975 889999999999876
Q ss_pred cCCCCCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCCh
Q 011005 359 HADSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDR 438 (496)
Q Consensus 359 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (496)
.... ......||+.|+|||++.+..++.++||||||+++|||++|+.||.... ........+......... .
T Consensus 202 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~------~~~~~~~~i~~~~~~~~~-~ 273 (349)
T 2w4o_A 202 EHQV-LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDER------GDQFMFRRILNCEYYFIS-P 273 (349)
T ss_dssp ------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTT------CHHHHHHHHHTTCCCCCT-T
T ss_pred Cccc-ccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCc------ccHHHHHHHHhCCCccCC-c
Confidence 4322 2334678999999999999999999999999999999999999985321 111122223322221111 0
Q ss_pred hHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCCC
Q 011005 439 KVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTPL 480 (496)
Q Consensus 439 ~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~~ 480 (496)
........+.+++.+||+.||++|||+.|+++|+|+......
T Consensus 274 ~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~~~~ 315 (349)
T 2w4o_A 274 WWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQHPWVTGKAAN 315 (349)
T ss_dssp TTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTTTSTTCC
T ss_pred hhhhCCHHHHHHHHHHccCChhhCcCHHHHhcCcccCCCccc
Confidence 011122347799999999999999999999999999876554
No 60
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=1.2e-44 Score=354.38 Aligned_cols=252 Identities=22% Similarity=0.316 Sum_probs=212.0
Q ss_pred HhCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccch--hHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEE
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLI 280 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV 280 (496)
.++|++.+.||+|+||.||+|..+ +|+.||+|.+.... .....+.+.+|+.+++.++||||+++++++.+....++|
T Consensus 40 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 119 (350)
T 1rdq_E 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV 119 (350)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEE
Confidence 367999999999999999999765 68999999997643 223346788999999999999999999999999999999
Q ss_pred EEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccC
Q 011005 281 YEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHA 360 (496)
Q Consensus 281 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 360 (496)
|||++||+|.+++.... .+++..++.++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+++....
T Consensus 120 ~e~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~ 193 (350)
T 1rdq_E 120 MEYVAGGEMFSHLRRIG---RFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193 (350)
T ss_dssp EECCTTCBHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred EcCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---HCCcccccCccceEEECCCCCEEEcccccceeccC
Confidence 99999999999998643 6899999999999999999999 77999999999999999999999999999987643
Q ss_pred CCCCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhH
Q 011005 361 DSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKV 440 (496)
Q Consensus 361 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 440 (496)
. ....+||+.|+|||++.+..++.++||||+|+++|||++|+.||... ........+.......+..
T Consensus 194 ~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~-------~~~~~~~~i~~~~~~~p~~--- 260 (350)
T 1rdq_E 194 R---TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD-------QPIQIYEKIVSGKVRFPSH--- 260 (350)
T ss_dssp C---BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCS-------SHHHHHHHHHHCCCCCCTT---
T ss_pred C---cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCC-------CHHHHHHHHHcCCCCCCCC---
Confidence 2 33467999999999999999999999999999999999999999632 1222333333333322211
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCC-----HHHHHHHHHHhc
Q 011005 441 IRDILLISTVSFACLQSNPKSRPT-----MQSVSQEFLITR 476 (496)
Q Consensus 441 ~~~~~~l~~li~~cl~~dP~~Rps-----~~evl~~~~~~~ 476 (496)
....+.+++.+||+.||++||+ ++|+++|+|+..
T Consensus 261 --~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h~~f~~ 299 (350)
T 1rdq_E 261 --FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFAT 299 (350)
T ss_dssp --CCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTSGGGTT
T ss_pred --CCHHHHHHHHHHhhcCHHhccCCccCCHHHHHhCcCcCC
Confidence 1224778999999999999998 999999999864
No 61
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=8.6e-45 Score=347.52 Aligned_cols=259 Identities=25% Similarity=0.371 Sum_probs=202.8
Q ss_pred HhCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccch--hHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEE
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLI 280 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV 280 (496)
.++|++.+.||+|+||.||+|.+. +++.||+|.+.... .....+.+.+|+.++++++||||+++++++..++..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 89 (294)
T 4eqm_A 10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLV 89 (294)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEE
T ss_pred hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEE
Confidence 467999999999999999999754 68999999985432 334457789999999999999999999999999999999
Q ss_pred EEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccC
Q 011005 281 YEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHA 360 (496)
Q Consensus 281 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 360 (496)
|||+++++|.+++.... .+++..++.++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++....
T Consensus 90 ~e~~~g~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 163 (294)
T 4eqm_A 90 MEYIEGPTLSEYIESHG---PLSVDTAINFTNQILDGIKHAH---DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSE 163 (294)
T ss_dssp EECCCSCBHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCSSSTTC--
T ss_pred EeCCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEEeCCCcccccc
Confidence 99999999999997654 6899999999999999999999 77999999999999999999999999999987654
Q ss_pred CCC-CccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChh
Q 011005 361 DSS-NRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRK 439 (496)
Q Consensus 361 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 439 (496)
... ......||+.|+|||.+.+..++.++||||+|+++|+|++|+.||.... .............+......
T Consensus 164 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~-------~~~~~~~~~~~~~~~~~~~~ 236 (294)
T 4eqm_A 164 TSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGET-------AVSIAIKHIQDSVPNVTTDV 236 (294)
T ss_dssp -----------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSC-------HHHHHHHHHSSCCCCHHHHS
T ss_pred ccccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCC-------hHHHHHHHhhccCCCcchhc
Confidence 322 2334568999999999999999999999999999999999999996322 11112222222222111000
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCC-CHHHHHHHHHHh
Q 011005 440 VIRDILLISTVSFACLQSNPKSRP-TMQSVSQEFLIT 475 (496)
Q Consensus 440 ~~~~~~~l~~li~~cl~~dP~~Rp-s~~evl~~~~~~ 475 (496)
....+..+.+++.+||+.||++|| +++++.+.+...
T Consensus 237 ~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~ 273 (294)
T 4eqm_A 237 RKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSV 273 (294)
T ss_dssp CTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTS
T ss_pred ccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHH
Confidence 111223577899999999999999 666666666543
No 62
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=1.2e-44 Score=351.27 Aligned_cols=264 Identities=26% Similarity=0.344 Sum_probs=206.9
Q ss_pred HhCCCCcceeeecCCeeEEEEEeCCCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCC----eEEE
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKK----CMFL 279 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~----~~~l 279 (496)
.++|++.+.||+|+||+||+|.+. ++.||||++...... .....+|+.++++++||||+++++++.... ..++
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~~~--~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~l 99 (322)
T 3soc_A 23 SMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQDKQ--SWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWL 99 (322)
T ss_dssp TEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGGHH--HHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEE
T ss_pred hhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCchH--HHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEE
Confidence 367999999999999999999885 789999999765432 244567899999999999999999998743 4799
Q ss_pred EEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCC----------CeEEeCCCCCceEecCCCCeEE
Q 011005 280 IYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSP----------SIIHRDISSNNILLNSKLEAFV 349 (496)
Q Consensus 280 V~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~----------~i~H~dlkp~Nil~~~~~~~kl 349 (496)
||||+++|+|.+++... .+++..++.++.|++.||+||| +. +|+||||||+|||++.++.+||
T Consensus 100 v~e~~~~g~L~~~l~~~----~~~~~~~~~i~~qi~~al~~LH---~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL 172 (322)
T 3soc_A 100 ITAFHEKGSLSDFLKAN----VVSWNELCHIAETMARGLAYLH---EDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACI 172 (322)
T ss_dssp EEECCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHT---CCEEEETTEEECEEECSCCSGGGEEECTTCCEEE
T ss_pred EEecCCCCCHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHH---hhccccccccCCCEEeCCCChHhEEECCCCeEEE
Confidence 99999999999999764 5899999999999999999999 67 9999999999999999999999
Q ss_pred ccccccccccCCCCC--cccccccccccccccccc-----CCcCcccchhhHHHHHHHHHhCCCCCccccccCCCC----
Q 011005 350 ADFGTARLLHADSSN--RTLLAGTYGYIAPELAYT-----MVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSS---- 418 (496)
Q Consensus 350 ~Dfg~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~---- 418 (496)
+|||+++........ .....||+.|+|||++.+ ..++.++||||||+++|||++|+.||..........
T Consensus 173 ~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~ 252 (322)
T 3soc_A 173 ADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEE 252 (322)
T ss_dssp CCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHH
T ss_pred ccCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhh
Confidence 999999876543322 233578999999999987 456678999999999999999999987432211100
Q ss_pred -----CCcchhHhhhcCCCCCCCCh--hHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhcc
Q 011005 419 -----DPKIMLIDVLDQRLPPPVDR--KVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRK 477 (496)
Q Consensus 419 -----~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~ 477 (496)
...............+.... ........+.+++.+||+.||++|||+.|+++.+....+
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~ 318 (322)
T 3soc_A 253 IGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQR 318 (322)
T ss_dssp HCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred hccCCchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 01111111222222222222 112334458899999999999999999999999876554
No 63
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=3.2e-44 Score=357.53 Aligned_cols=264 Identities=17% Similarity=0.282 Sum_probs=209.0
Q ss_pred HhCCCCcceeeec--CCeeEEEEEeC-CCcEEEEEEcccch-hHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEE
Q 011005 204 TEDFDIRYCIGTG--GYGSVYKAQLP-NGKVFALKKLHTSE-ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFL 279 (496)
Q Consensus 204 ~~~~~~~~~lg~G--~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 279 (496)
.++|++.+.||+| +||+||+|.++ +++.||||++.... .....+.+.+|+.+++.++||||+++++++..++..++
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 103 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWV 103 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEE
Confidence 4679999999999 99999999775 79999999997653 23445678899999999999999999999999999999
Q ss_pred EEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEcccccccccc
Q 011005 280 IYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLH 359 (496)
Q Consensus 280 V~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 359 (496)
||||+++|+|.+++..... ..+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||.+....
T Consensus 104 v~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~ 179 (389)
T 3gni_B 104 VTSFMAYGSAKDLICTHFM-DGMNELAIAYILQGVLKALDYIH---HMGYVHRSVKASHILISVDGKVYLSGLRSNLSMI 179 (389)
T ss_dssp EEECCTTCBHHHHHHHTCT-TCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCGGGCEECE
T ss_pred EEEccCCCCHHHHHhhhcc-cCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEcccccceeec
Confidence 9999999999999976532 25899999999999999999999 7799999999999999999999999999986543
Q ss_pred CCC-------CCcccccccccccccccccc--CCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcC
Q 011005 360 ADS-------SNRTLLAGTYGYIAPELAYT--MVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQ 430 (496)
Q Consensus 360 ~~~-------~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 430 (496)
... .......||+.|+|||++.+ ..++.++||||+||++|+|++|+.||...... .........
T Consensus 180 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-------~~~~~~~~~ 252 (389)
T 3gni_B 180 SHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPAT-------QMLLEKLNG 252 (389)
T ss_dssp ETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCST-------THHHHC---
T ss_pred cccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHH-------HHHHHHhcC
Confidence 221 11223478899999999987 67899999999999999999999999643211 111111100
Q ss_pred CCCC-----------------------------------------CCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHH
Q 011005 431 RLPP-----------------------------------------PVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVS 469 (496)
Q Consensus 431 ~~~~-----------------------------------------~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl 469 (496)
..+. +...........+.+|+.+||+.||++|||++|++
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell 332 (389)
T 3gni_B 253 TVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLL 332 (389)
T ss_dssp -----------------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHT
T ss_pred CCCccccccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHh
Confidence 0000 00000011123478899999999999999999999
Q ss_pred HHHHHhccC
Q 011005 470 QEFLITRKT 478 (496)
Q Consensus 470 ~~~~~~~~~ 478 (496)
+|+|+....
T Consensus 333 ~hp~f~~~~ 341 (389)
T 3gni_B 333 NHSFFKQIK 341 (389)
T ss_dssp TSGGGGGC-
T ss_pred cCHHHHHHh
Confidence 999997654
No 64
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.2e-44 Score=354.78 Aligned_cols=268 Identities=25% Similarity=0.310 Sum_probs=210.7
Q ss_pred HHHHHhCCCCcceeeecCCeeEEEEEe-CCCcEEEEEEcccch----hHHHHHHHHHHHHHHHhhcccccccccceeecC
Q 011005 200 LIEATEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSE----ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHK 274 (496)
Q Consensus 200 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~ 274 (496)
+....++|++.+.||+|+||+||+|.. .+++.||+|.+.... .....+.+.+|+.++++++||||+++++++.+.
T Consensus 21 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~ 100 (345)
T 3hko_A 21 LLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDE 100 (345)
T ss_dssp HHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred hhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccC
Confidence 345678999999999999999999976 468899999987542 223456789999999999999999999999999
Q ss_pred CeEEEEEEecCCCChhhhhhCCC-------------------------------------CCccCCHHHHHHHHHHHHHH
Q 011005 275 KCMFLIYEYMERGSLFCNLHNNE-------------------------------------DAVELDWAKRVNIVKAMAHA 317 (496)
Q Consensus 275 ~~~~lV~e~~~~g~L~~~l~~~~-------------------------------------~~~~~~~~~~~~i~~~i~~~ 317 (496)
+..++||||+++|+|.+++.... ....+++..++.++.||+.|
T Consensus 101 ~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~ 180 (345)
T 3hko_A 101 QYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSA 180 (345)
T ss_dssp SEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHH
Confidence 99999999999999999885210 01124677788999999999
Q ss_pred HHHHHhCCCCCeEEeCCCCCceEecCCC--CeEEccccccccccCCCC----Ccccccccccccccccccc--CCcCccc
Q 011005 318 LAYLHHDCSPSIIHRDISSNNILLNSKL--EAFVADFGTARLLHADSS----NRTLLAGTYGYIAPELAYT--MVMTEKC 389 (496)
Q Consensus 318 l~~lh~~~~~~i~H~dlkp~Nil~~~~~--~~kl~Dfg~~~~~~~~~~----~~~~~~gt~~y~aPE~~~~--~~~~~~~ 389 (496)
|+||| +.+|+||||||+||+++.++ .+||+|||+++.+..... ......||+.|+|||++.+ ..++.++
T Consensus 181 l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~ 257 (345)
T 3hko_A 181 LHYLH---NQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKC 257 (345)
T ss_dssp HHHHH---HTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHH
T ss_pred HHHHH---HCCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHH
Confidence 99999 67999999999999998776 899999999987643222 1234579999999999875 6788999
Q ss_pred chhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHH
Q 011005 390 DVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVS 469 (496)
Q Consensus 390 DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl 469 (496)
||||||+++|+|++|+.||.... ...............+... .......+.+++.+||+.||++|||+.|++
T Consensus 258 DiwslG~il~el~~g~~pf~~~~-------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~~p~~Rps~~~~l 329 (345)
T 3hko_A 258 DAWSAGVLLHLLLMGAVPFPGVN-------DADTISQVLNKKLCFENPN-YNVLSPLARDLLSNLLNRNVDERFDAMRAL 329 (345)
T ss_dssp HHHHHHHHHHHHHHSSCSSCCSS-------HHHHHHHHHHCCCCTTSGG-GGGSCHHHHHHHHHHSCSCTTTSCCHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCCCCCC-------hHHHHHHHHhcccccCCcc-cccCCHHHHHHHHHHcCCChhHCCCHHHHh
Confidence 99999999999999999996322 2223333333333322211 111223577999999999999999999999
Q ss_pred HHHHHhccC
Q 011005 470 QEFLITRKT 478 (496)
Q Consensus 470 ~~~~~~~~~ 478 (496)
+|+|+....
T Consensus 330 ~hp~~~~~~ 338 (345)
T 3hko_A 330 QHPWISQFS 338 (345)
T ss_dssp HSHHHHTTS
T ss_pred cChhhccCh
Confidence 999997653
No 65
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=2.2e-44 Score=356.69 Aligned_cols=261 Identities=23% Similarity=0.297 Sum_probs=211.7
Q ss_pred HhCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEE
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYE 282 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e 282 (496)
.++|++.+.||+|+||.||+|..+ +++.||+|.+...... ....+.+|+.+++.++||||+++++++......++|||
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~-~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E 128 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPL-DKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILE 128 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHH-HHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEE
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchh-hHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEE
Confidence 467999999999999999999765 6889999998765432 23568899999999999999999999999999999999
Q ss_pred ecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecC--CCCeEEccccccccccC
Q 011005 283 YMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNS--KLEAFVADFGTARLLHA 360 (496)
Q Consensus 283 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~--~~~~kl~Dfg~~~~~~~ 360 (496)
|+++|+|.+++.... ..+++..++.++.||+.||+||| +.+|+||||||+|||++. ++.+||+|||+++....
T Consensus 129 ~~~gg~L~~~l~~~~--~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~ 203 (387)
T 1kob_A 129 FLSGGELFDRIAAED--YKMSEAEVINYMRQACEGLKHMH---EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNP 203 (387)
T ss_dssp CCCCCBHHHHTTCTT--CCBCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCT
T ss_pred cCCCCcHHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccchHHeEEecCCCCceEEEecccceecCC
Confidence 999999999987543 26899999999999999999999 779999999999999974 47799999999987654
Q ss_pred CCCCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhH
Q 011005 361 DSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKV 440 (496)
Q Consensus 361 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 440 (496)
.. ......||+.|+|||++.+..++.++||||+||++|+|++|+.||.... .......+.......+... .
T Consensus 204 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~-------~~~~~~~i~~~~~~~~~~~-~ 274 (387)
T 1kob_A 204 DE-IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGED-------DLETLQNVKRCDWEFDEDA-F 274 (387)
T ss_dssp TS-CEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSS-------HHHHHHHHHHCCCCCCSST-T
T ss_pred Cc-ceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCC-------HHHHHHHHHhCCCCCCccc-c
Confidence 32 2344579999999999999999999999999999999999999996322 1112222222221111100 1
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCC
Q 011005 441 IRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTP 479 (496)
Q Consensus 441 ~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~ 479 (496)
......+.+++.+||+.||++|||+.|+++|+|+.....
T Consensus 275 ~~~s~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~ 313 (387)
T 1kob_A 275 SSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWLKGDHS 313 (387)
T ss_dssp TTSCHHHHHHHHTTSCSSGGGSCCHHHHHTSTTTSSCCT
T ss_pred ccCCHHHHHHHHHHcCCChhHCcCHHHHhhCccccCCcc
Confidence 111234779999999999999999999999999976543
No 66
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=2.6e-44 Score=354.97 Aligned_cols=257 Identities=26% Similarity=0.381 Sum_probs=210.0
Q ss_pred HhCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccch--hHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEE
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLI 280 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV 280 (496)
.++|++.+.||+|+||.||+|..+ +++.||+|.+.... .....+.+.+|+.+++.++||||+++++++......++|
T Consensus 14 ~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv 93 (384)
T 4fr4_A 14 FDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMV 93 (384)
T ss_dssp GGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 367999999999999999999765 58899999987643 223346788999999999999999999999999999999
Q ss_pred EEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccC
Q 011005 281 YEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHA 360 (496)
Q Consensus 281 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 360 (496)
|||+.||+|.+++.... .+++..+..++.||+.||.||| +.||+||||||+|||++.++.+||+|||+++....
T Consensus 94 ~e~~~gg~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~ 167 (384)
T 4fr4_A 94 VDLLLGGDLRYHLQQNV---HFKEETVKLFICELVMALDYLQ---NQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPR 167 (384)
T ss_dssp ECCCTTEEHHHHHHTTC---CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EecCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---HCCceeccCcHHHeEECCCCCEEEeccceeeeccC
Confidence 99999999999998654 6899999999999999999999 77999999999999999999999999999987643
Q ss_pred CCCCcccccccccccccccccc---CCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCC
Q 011005 361 DSSNRTLLAGTYGYIAPELAYT---MVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVD 437 (496)
Q Consensus 361 ~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (496)
. ......+||+.|+|||++.+ ..++.++||||+||++|+|++|+.||..... .................+..
T Consensus 168 ~-~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~----~~~~~~~~~~~~~~~~~p~~ 242 (384)
T 4fr4_A 168 E-TQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSS----TSSKEIVHTFETTVVTYPSA 242 (384)
T ss_dssp T-CCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTT----SCHHHHHHHHHHCCCCCCTT
T ss_pred C-CceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCC----ccHHHHHHHHhhcccCCCCc
Confidence 3 33455689999999999874 4589999999999999999999999963221 11111122222222221111
Q ss_pred hhHHHHHHHHHHHHHhcccCCCCCCCC-HHHHHHHHHHhc
Q 011005 438 RKVIRDILLISTVSFACLQSNPKSRPT-MQSVSQEFLITR 476 (496)
Q Consensus 438 ~~~~~~~~~l~~li~~cl~~dP~~Rps-~~evl~~~~~~~ 476 (496)
....+.+++.+||+.||++||+ ++++++|+|+..
T Consensus 243 -----~s~~~~~li~~lL~~dP~~R~s~~~~l~~hp~f~~ 277 (384)
T 4fr4_A 243 -----WSQEMVSLLKKLLEPNPDQRFSQLSDVQNFPYMND 277 (384)
T ss_dssp -----SCHHHHHHHHHHSCSSGGGSCCSHHHHHTSGGGTT
T ss_pred -----CCHHHHHHHHHHhcCCHhHhcccHHHHHcChhhhc
Confidence 1124778999999999999998 999999999854
No 67
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=2.6e-44 Score=347.22 Aligned_cols=266 Identities=25% Similarity=0.319 Sum_probs=203.8
Q ss_pred hCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccch-hHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEE
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSE-ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYE 282 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e 282 (496)
++|++.+.||+|+||+||+|.+. +|+.||+|++.... .....+.+.+|+.++++++||||+++++++...+..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFE 82 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEE
Confidence 67999999999999999999775 58999999986643 33345678899999999999999999999999999999999
Q ss_pred ecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCC
Q 011005 283 YMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADS 362 (496)
Q Consensus 283 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 362 (496)
|+++++|.+++.... .+++..+..++.|++.||+||| +.+++||||||+||+++.++.+||+|||++.......
T Consensus 83 ~~~~~~l~~~~~~~~---~~~~~~~~~i~~~l~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 156 (311)
T 4agu_A 83 YCDHTVLHELDRYQR---GVPEHLVKSITWQTLQAVNFCH---KHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPS 156 (311)
T ss_dssp CCSEEHHHHHHHTSS---CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECC---
T ss_pred eCCCchHHHHHhhhc---CCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCCChhhEEEcCCCCEEEeeCCCchhccCcc
Confidence 999999998887543 6899999999999999999999 7799999999999999999999999999998776544
Q ss_pred CCcccccccccccccccccc-CCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhh-------------
Q 011005 363 SNRTLLAGTYGYIAPELAYT-MVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVL------------- 428 (496)
Q Consensus 363 ~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~------------- 428 (496)
.......||+.|+|||++.+ ..++.++||||+|+++|+|++|+.||........ ........
T Consensus 157 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 232 (311)
T 4agu_A 157 DYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQ----LYLIRKTLGDLIPRHQQVFST 232 (311)
T ss_dssp ---------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH----HHHHHHHHCSCCHHHHHHHHT
T ss_pred cccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHH----HHHHHHHhccccccccccccc
Confidence 44455678999999999876 6789999999999999999999999964321100 00000000
Q ss_pred -----cCCCCCCCChhH-----HHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCCC
Q 011005 429 -----DQRLPPPVDRKV-----IRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTPL 480 (496)
Q Consensus 429 -----~~~~~~~~~~~~-----~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~~ 480 (496)
....+.+..... ......+.+++.+||+.||++|||++|+++|+|+......
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~~ 294 (311)
T 4agu_A 233 NQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYFENIREI 294 (311)
T ss_dssp CGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTSGGGTTCC--
T ss_pred ccccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcChHHHhccCH
Confidence 001111110000 0112347789999999999999999999999999875444
No 68
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=4.8e-44 Score=339.19 Aligned_cols=263 Identities=24% Similarity=0.341 Sum_probs=213.1
Q ss_pred HHhCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEE
Q 011005 203 ATEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIY 281 (496)
Q Consensus 203 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~ 281 (496)
..++|++.+.||+|+||.||+|... +++.||+|.+.........+.+.+|+.+++.++||||+++++++..++..++||
T Consensus 5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 84 (276)
T 2yex_A 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFL 84 (276)
T ss_dssp HHHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred eecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEE
Confidence 4578999999999999999999765 789999999876554445577899999999999999999999999999999999
Q ss_pred EecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCC
Q 011005 282 EYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHAD 361 (496)
Q Consensus 282 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 361 (496)
||+++++|.+++.... .+++..++.++.|++.||.||| +.+++||||||+||+++.++.++|+|||++......
T Consensus 85 e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~ 158 (276)
T 2yex_A 85 EYCSGGELFDRIEPDI---GMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYN 158 (276)
T ss_dssp ECCTTEEGGGGSBTTT---BCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEECEET
T ss_pred EecCCCcHHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCChHHEEEccCCCEEEeeCCCccccCCC
Confidence 9999999999987543 6899999999999999999999 779999999999999999999999999999866432
Q ss_pred C--CCccccccccccccccccccCCc-CcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCCh
Q 011005 362 S--SNRTLLAGTYGYIAPELAYTMVM-TEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDR 438 (496)
Q Consensus 362 ~--~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (496)
. .......|++.|+|||.+.+..+ +.++||||+|+++|+|++|+.||..... .................
T Consensus 159 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~------~~~~~~~~~~~~~~~~~-- 230 (276)
T 2yex_A 159 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD------SCQEYSDWKEKKTYLNP-- 230 (276)
T ss_dssp TEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCT------TSHHHHHHHTTCTTSTT--
T ss_pred cchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCch------HHHHHHHhhhcccccCc--
Confidence 2 12334578999999999988765 7799999999999999999999964221 11112222222111111
Q ss_pred hHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCCC
Q 011005 439 KVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTPL 480 (496)
Q Consensus 439 ~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~~ 480 (496)
.......+.+++.+||+.||++|||++|+++|+|+......
T Consensus 231 -~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~~ 271 (276)
T 2yex_A 231 -WKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKPLKK 271 (276)
T ss_dssp -GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTCCCC-
T ss_pred -hhhcCHHHHHHHHHHCCCCchhCCCHHHHhcCccccChhhc
Confidence 11112346789999999999999999999999999766443
No 69
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=1.8e-44 Score=342.64 Aligned_cols=259 Identities=26% Similarity=0.426 Sum_probs=187.8
Q ss_pred HhCCCCcceeeecCCeeEEEEEe-CCCcEEEEEEcccchh--HHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEE
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSEE--LAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLI 280 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV 280 (496)
.++|.+.+.||+|+||.||+|.. .+++.||+|.+..... ....+.+.+|+.++++++||||+++++++...+..++|
T Consensus 10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (278)
T 3cok_A 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLV 89 (278)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEE
T ss_pred cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEE
Confidence 35799999999999999999976 5789999999975432 22346788999999999999999999999999999999
Q ss_pred EEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccC
Q 011005 281 YEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHA 360 (496)
Q Consensus 281 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 360 (496)
|||+++++|.+++.... ..+++..++.++.|++.||.||| +.+++||||||+||+++.++.++|+|||++.....
T Consensus 90 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~ 164 (278)
T 3cok_A 90 LEMCHNGEMNRYLKNRV--KPFSENEARHFMHQIITGMLYLH---SHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKM 164 (278)
T ss_dssp EECCTTEEHHHHHHTCS--SCCCHHHHHHHHHHHHHHHHHHH---HTTEECSSCCGGGEEECTTCCEEECCCTTCEECC-
T ss_pred EecCCCCcHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCCEEEEeecceeeccC
Confidence 99999999999998643 36899999999999999999999 67999999999999999999999999999987654
Q ss_pred CCCCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhH
Q 011005 361 DSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKV 440 (496)
Q Consensus 361 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 440 (496)
.........||+.|+|||.+.+..++.++||||+|+++|+|++|+.||...... .............+.
T Consensus 165 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-------~~~~~~~~~~~~~~~---- 233 (278)
T 3cok_A 165 PHEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVK-------NTLNKVVLADYEMPS---- 233 (278)
T ss_dssp ---------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC------------CCSSCCCCCT----
T ss_pred CCCcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHH-------HHHHHHhhcccCCcc----
Confidence 443344567899999999999999999999999999999999999999643211 111111111111110
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCC
Q 011005 441 IRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTP 479 (496)
Q Consensus 441 ~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~ 479 (496)
.....+.+++.+||+.||++|||++|+++|+|+.....
T Consensus 234 -~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~ 271 (278)
T 3cok_A 234 -FLSIEAKDLIHQLLRRNPADRLSLSSVLDHPFMSRNSS 271 (278)
T ss_dssp -TSCHHHHHHHHHHSCSSGGGSCCHHHHTTSTTTC----
T ss_pred -ccCHHHHHHHHHHcccCHhhCCCHHHHhcCccccCCCC
Confidence 01124678999999999999999999999999976543
No 70
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=1e-43 Score=342.32 Aligned_cols=275 Identities=31% Similarity=0.500 Sum_probs=221.0
Q ss_pred ccccHHHHHHHHhCCCCc------ceeeecCCeeEEEEEeCCCcEEEEEEcccch---hHHHHHHHHHHHHHHHhhcccc
Q 011005 193 GRIVYEDLIEATEDFDIR------YCIGTGGYGSVYKAQLPNGKVFALKKLHTSE---ELAFIKSFKNEAQVLSQVLHRN 263 (496)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~------~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~---~~~~~~~~~~e~~~l~~l~h~n 263 (496)
..+++.++..++++|... +.||+|+||.||+|.. +++.||+|++.... .....+.+.+|+.++++++|||
T Consensus 13 ~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ 91 (307)
T 2nru_A 13 HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHEN 91 (307)
T ss_dssp EECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTT
T ss_pred CcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCC
Confidence 357789999999998877 8999999999999987 68899999987532 2334567899999999999999
Q ss_pred cccccceeecCCeEEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecC
Q 011005 264 IVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNS 343 (496)
Q Consensus 264 iv~~~~~~~~~~~~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~ 343 (496)
|+++++++...+..++||||+++|+|.+++........+++..++.++.|++.||.||| +.+++||||||+||+++.
T Consensus 92 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dlkp~Nili~~ 168 (307)
T 2nru_A 92 LVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDE 168 (307)
T ss_dssp BCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECT
T ss_pred eEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHh---cCCeecCCCCHHHEEEcC
Confidence 99999999999999999999999999999986544456899999999999999999999 679999999999999999
Q ss_pred CCCeEEccccccccccCCCCC--ccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCC--
Q 011005 344 KLEAFVADFGTARLLHADSSN--RTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSD-- 419 (496)
Q Consensus 344 ~~~~kl~Dfg~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~-- 419 (496)
++.+||+|||++......... .....||+.|+|||.+.+ .++.++||||||+++|+|++|+.||...........
T Consensus 169 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~ 247 (307)
T 2nru_A 169 AFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIK 247 (307)
T ss_dssp TCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHHH
T ss_pred CCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHHH
Confidence 999999999999876543222 233568999999998875 588999999999999999999999974332110000
Q ss_pred -----CcchhHhhhcCCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhc
Q 011005 420 -----PKIMLIDVLDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITR 476 (496)
Q Consensus 420 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~ 476 (496)
........+...+.. ........+.+++.+||+.||++|||+.++++++....
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~ 305 (307)
T 2nru_A 248 EEIEDEEKTIEDYIDKKMND----ADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMT 305 (307)
T ss_dssp HHHHTTSCCHHHHSCSSCSC----CCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC
T ss_pred HHhhhhhhhhhhhccccccc----cchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHh
Confidence 000112222222221 12234456889999999999999999999999987653
No 71
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=3.7e-44 Score=340.57 Aligned_cols=257 Identities=30% Similarity=0.460 Sum_probs=208.3
Q ss_pred HhCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchh--HHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEE
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEE--LAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLI 280 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV 280 (496)
.++|++.+.||+|+||+||+|.+. +++.||+|.+..... ......+.+|+.++++++||||+++++++......++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 87 (279)
T 3fdn_A 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 87 (279)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEE
Confidence 467999999999999999999664 577999999866432 22346788999999999999999999999999999999
Q ss_pred EEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccC
Q 011005 281 YEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHA 360 (496)
Q Consensus 281 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 360 (496)
|||+++|+|.+.+.... .+++..++.++.|++.||+||| +.+++||||||+||+++.++.++|+|||++.....
T Consensus 88 ~e~~~~~~l~~~l~~~~---~~~~~~~~~~~~qi~~~l~~LH---~~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~ 161 (279)
T 3fdn_A 88 LEYAPLGTVYRELQKLS---KFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS 161 (279)
T ss_dssp ECCCTTEEHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHH---TTTCEECCCCGGGEEECTTSCEEECSCCEESCC--
T ss_pred EecCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---hCCEecccCChHhEEEcCCCCEEEEeccccccCCc
Confidence 99999999999987643 6899999999999999999999 78999999999999999999999999999865432
Q ss_pred CCCCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhH
Q 011005 361 DSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKV 440 (496)
Q Consensus 361 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 440 (496)
. ......|++.|+|||.+.+..++.++||||+|+++|+|++|+.||.... ...............+..
T Consensus 162 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-------~~~~~~~~~~~~~~~~~~--- 229 (279)
T 3fdn_A 162 S--RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT-------YQETYKRISRVEFTFPDF--- 229 (279)
T ss_dssp --------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSS-------HHHHHHHHHHTCCCCCTT---
T ss_pred c--cccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCc-------HHHHHHHHHhCCCCCCCc---
Confidence 2 2344578999999999999999999999999999999999999986321 111222222222211111
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCCC
Q 011005 441 IRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTPL 480 (496)
Q Consensus 441 ~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~~ 480 (496)
....+.+++.+||+.||++|||++|+++|+|+......
T Consensus 230 --~~~~~~~li~~~l~~~p~~Rps~~e~l~h~~~~~~~~~ 267 (279)
T 3fdn_A 230 --VTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSK 267 (279)
T ss_dssp --SCHHHHHHHHHHCCSSGGGSCCHHHHHHCHHHHHHCSS
T ss_pred --CCHHHHHHHHHHhccChhhCCCHHHHhhCccccCCccC
Confidence 11246789999999999999999999999999876543
No 72
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=3.5e-44 Score=338.64 Aligned_cols=256 Identities=24% Similarity=0.395 Sum_probs=209.4
Q ss_pred HhCCCCcceeeecCCeeEEEEEeCCCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEe
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEY 283 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~ 283 (496)
.++|++.+.||+|+||.||+|.++++..||+|++...... .+.+.+|++++++++||||+++++++......++||||
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~--~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMS--EDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEY 84 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTBC--HHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCCc--HHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEc
Confidence 4678999999999999999999988889999999765432 25688999999999999999999999999999999999
Q ss_pred cCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCC
Q 011005 284 MERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSS 363 (496)
Q Consensus 284 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 363 (496)
+++++|.+++.... ..+++..++.++.|++.||+||| +.+++||||||+||+++.++.++|+|||++........
T Consensus 85 ~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~ 159 (268)
T 3sxs_A 85 ISNGCLLNYLRSHG--KGLEPSQLLEMCYDVCEGMAFLE---SHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQY 159 (268)
T ss_dssp CTTCBHHHHHHHHG--GGCCHHHHHHHHHHHHHHHHHHH---HTTEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCE
T ss_pred cCCCcHHHHHHHcC--CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCcCcceEEECCCCCEEEccCccceecchhhh
Confidence 99999999997642 25899999999999999999999 77999999999999999999999999999987644322
Q ss_pred C-ccccccccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHH
Q 011005 364 N-RTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVI 441 (496)
Q Consensus 364 ~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (496)
. .....+|+.|+|||.+.+..++.++||||+|+++|+|++ |+.||.... ...................
T Consensus 160 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~-------~~~~~~~~~~~~~~~~~~~--- 229 (268)
T 3sxs_A 160 VSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYT-------NSEVVLKVSQGHRLYRPHL--- 229 (268)
T ss_dssp EECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSC-------HHHHHHHHHTTCCCCCCTT---
T ss_pred hcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccC-------hHHHHHHHHcCCCCCCCCc---
Confidence 1 222346678999999999999999999999999999999 999986322 1112222222211111111
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhcc
Q 011005 442 RDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRK 477 (496)
Q Consensus 442 ~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~ 477 (496)
....+.+++.+||+.||++|||+.|+++++...++
T Consensus 230 -~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~ 264 (268)
T 3sxs_A 230 -ASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLRE 264 (268)
T ss_dssp -SCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC
T ss_pred -ChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhh
Confidence 11247789999999999999999999999977654
No 73
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=4.3e-45 Score=370.16 Aligned_cols=256 Identities=21% Similarity=0.294 Sum_probs=202.3
Q ss_pred HhCCCCcceeeecCCeeEEEEEe-CCCcEEEEEEcccch--hHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEE
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLI 280 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV 280 (496)
.++|++.+.||+|+||.||+|.. .+|+.||+|++.... .......+.+|+.+++.++||||+++++++...+..++|
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 226 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV 226 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence 46799999999999999999975 468999999997642 223345678899999999999999999999999999999
Q ss_pred EEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccC
Q 011005 281 YEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHA 360 (496)
Q Consensus 281 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 360 (496)
|||+++|+|.+++.... .+++..+..++.||+.||+|||+ ..||+||||||+|||++.++.+||+|||+++....
T Consensus 227 ~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~--~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 301 (446)
T 4ejn_A 227 MEYANGGELFFHLSRER---VFSEDRARFYGAEIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIK 301 (446)
T ss_dssp ECCCSSCBHHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHH--HTCCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC
T ss_pred EeeCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHhh--cCCEEECCCCHHHEEECCCCCEEEccCCCceeccC
Confidence 99999999999997644 68999999999999999999993 17999999999999999999999999999987554
Q ss_pred CCCCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhH
Q 011005 361 DSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKV 440 (496)
Q Consensus 361 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 440 (496)
........+||+.|+|||++.+..++.++||||||+++|||++|+.||.... .......+.......+..
T Consensus 302 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~-------~~~~~~~i~~~~~~~p~~--- 371 (446)
T 4ejn_A 302 DGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD-------HEKLFELILMEEIRFPRT--- 371 (446)
T ss_dssp -----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS-------HHHHHHHHHHCCCCCCTT---
T ss_pred CCcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCC-------HHHHHHHHHhCCCCCCcc---
Confidence 4444556789999999999999999999999999999999999999996321 222222333332222111
Q ss_pred HHHHHHHHHHHHhcccCCCCCCC-----CHHHHHHHHHHhc
Q 011005 441 IRDILLISTVSFACLQSNPKSRP-----TMQSVSQEFLITR 476 (496)
Q Consensus 441 ~~~~~~l~~li~~cl~~dP~~Rp-----s~~evl~~~~~~~ 476 (496)
....+.+|+.+||+.||++|| |++|+++|+|+..
T Consensus 372 --~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~hp~f~~ 410 (446)
T 4ejn_A 372 --LGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAG 410 (446)
T ss_dssp --SCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTT
T ss_pred --CCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhCccccC
Confidence 112467899999999999999 9999999999875
No 74
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=1.8e-44 Score=341.93 Aligned_cols=255 Identities=22% Similarity=0.337 Sum_probs=188.2
Q ss_pred hCCCCcceeeecCCeeEEEEEe-CCCcEEEEEEcccch--hHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEE
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIY 281 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~ 281 (496)
++|++.+.||+|+||.||+|.+ .+++.||+|++.... .....+.+.+|+.+++.++||||+++++++...+..++||
T Consensus 13 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 92 (275)
T 2eue_A 13 GNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp CCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEE
T ss_pred cceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEe
Confidence 5799999999999999999975 478999999987642 2233467889999999999999999999999999999999
Q ss_pred EecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCC
Q 011005 282 EYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHAD 361 (496)
Q Consensus 282 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 361 (496)
||+ ++++.+.+.... .+++..++.++.|++.||.||| +.+++||||||+||+++.++.+||+|||++......
T Consensus 93 e~~-~~~l~~~~~~~~---~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 165 (275)
T 2eue_A 93 EYA-GNELFDYIVQRD---KMSEQEARRFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG 165 (275)
T ss_dssp ECC-CEEHHHHHHTSS---SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTSCEEECCSSCC------
T ss_pred hhc-CCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---HCCCeeccCChHhEEECCCCCEEEeecccceeccCc
Confidence 999 678888887653 6899999999999999999999 779999999999999999999999999999766433
Q ss_pred CCCccccccccccccccccccCCc-CcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhH
Q 011005 362 SSNRTLLAGTYGYIAPELAYTMVM-TEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKV 440 (496)
Q Consensus 362 ~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 440 (496)
. ......||+.|+|||.+.+..+ +.++||||+|+++|+|++|+.||.... ...............+..
T Consensus 166 ~-~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-------~~~~~~~~~~~~~~~~~~--- 234 (275)
T 2eue_A 166 N-FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES-------IPVLFKNISNGVYTLPKF--- 234 (275)
T ss_dssp ----------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSS-------HHHHHHHHHHTCCCCCTT---
T ss_pred c-cccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCC-------HHHHHHHHHhCCCCCCcc---
Confidence 2 2334568999999999988766 689999999999999999999996321 112222222222221111
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCC
Q 011005 441 IRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTP 479 (496)
Q Consensus 441 ~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~ 479 (496)
....+.+++.+||+.||++|||++|+++|+|+....+
T Consensus 235 --~~~~~~~li~~~l~~dP~~Rps~~e~l~h~~f~~~~~ 271 (275)
T 2eue_A 235 --LSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFKVDLP 271 (275)
T ss_dssp --SCHHHHHHHHHHSCSSGGGSCCHHHHTTCHHHHTTCC
T ss_pred --CCHHHHHHHHHHhhcCHhHCCCHHHHhhCCeecccch
Confidence 1124678999999999999999999999999987644
No 75
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.7e-45 Score=365.51 Aligned_cols=265 Identities=23% Similarity=0.304 Sum_probs=210.8
Q ss_pred HHHHHHHHhCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccch--hHHHHHHHHHHHHHHHhhcccccccccceeec
Q 011005 197 YEDLIEATEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLH 273 (496)
Q Consensus 197 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~ 273 (496)
+++.....++|++.+.||+|+||+||+|..+ +++.||+|++.... .......+.+|..++..++||||+++++++.+
T Consensus 53 ~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~ 132 (412)
T 2vd5_A 53 LKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQD 132 (412)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEEC
T ss_pred hhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEee
Confidence 3444445688999999999999999999775 79999999997643 12223457899999999999999999999999
Q ss_pred CCeEEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEcccc
Q 011005 274 KKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFG 353 (496)
Q Consensus 274 ~~~~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg 353 (496)
.+..++||||++||+|.+++.+.. ..+++..++.++.||+.||+||| +.+|+||||||+|||++.++++||+|||
T Consensus 133 ~~~~~lVmE~~~gg~L~~~l~~~~--~~l~~~~~~~~~~qi~~aL~~LH---~~giiHrDLKp~NILld~~g~vkL~DFG 207 (412)
T 2vd5_A 133 ENYLYLVMEYYVGGDLLTLLSKFG--ERIPAEMARFYLAEIVMAIDSVH---RLGYVHRDIKPDNILLDRCGHIRLADFG 207 (412)
T ss_dssp SSEEEEEECCCCSCBHHHHHHHHS--SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCT
T ss_pred CCEEEEEEcCCCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHH---HCCeeecccCHHHeeecCCCCEEEeech
Confidence 999999999999999999997542 26899999999999999999999 7799999999999999999999999999
Q ss_pred ccccccCCCCC-ccccccccccccccccc-------cCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhH
Q 011005 354 TARLLHADSSN-RTLLAGTYGYIAPELAY-------TMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLI 425 (496)
Q Consensus 354 ~~~~~~~~~~~-~~~~~gt~~y~aPE~~~-------~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~ 425 (496)
+++........ ....+||+.|+|||++. +..++.++|||||||++|||++|+.||.... ......
T Consensus 208 la~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~-------~~~~~~ 280 (412)
T 2vd5_A 208 SCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADS-------TAETYG 280 (412)
T ss_dssp TCEECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSS-------HHHHHH
T ss_pred hheeccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCC-------HHHHHH
Confidence 99877544332 23468999999999987 4578999999999999999999999996321 112222
Q ss_pred hhhcC--CCCCCCChhHHHHHHHHHHHHHhcccCCCCCC---CCHHHHHHHHHHhc
Q 011005 426 DVLDQ--RLPPPVDRKVIRDILLISTVSFACLQSNPKSR---PTMQSVSQEFLITR 476 (496)
Q Consensus 426 ~~~~~--~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R---ps~~evl~~~~~~~ 476 (496)
.+... ....+.. .......+.+|+.+||. +|++| |+++|+++|+|+..
T Consensus 281 ~i~~~~~~~~~p~~--~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~Hpff~~ 333 (412)
T 2vd5_A 281 KIVHYKEHLSLPLV--DEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTHPFFFG 333 (412)
T ss_dssp HHHTHHHHCCCC------CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTSGGGTT
T ss_pred HHHhcccCcCCCcc--ccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcCCCcCC
Confidence 22211 1111100 00112247789999999 99998 59999999999864
No 76
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=5e-44 Score=344.21 Aligned_cols=261 Identities=25% Similarity=0.431 Sum_probs=202.2
Q ss_pred HhCCCCcceeeecCCeeEEEEEeCCCcEEEEEEcccch-hHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEE
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSE-ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYE 282 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e 282 (496)
.++|.+.+.||+|+||+||+|.+.+ .+|+|.++... .....+.+.+|+.++++++||||+++++++.. +..++|||
T Consensus 35 ~~~~~~~~~lG~G~~g~Vy~~~~~~--~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~lv~e 111 (307)
T 3lb7_A 35 ASEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQ 111 (307)
T ss_dssp TTSCCEEEEEEECSSCEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEE
T ss_pred ccceEEEeEecCCCCeEEEEEEECC--EEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc-CcEEEEEe
Confidence 3689999999999999999998743 58899887532 33445778999999999999999999998764 45789999
Q ss_pred ecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCC-
Q 011005 283 YMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHAD- 361 (496)
Q Consensus 283 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~- 361 (496)
|+++++|.+++.... ..+++..++.++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 112 ~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~~ 186 (307)
T 3lb7_A 112 WCEGSSLYKHLHVQE--TKFQMFQLIDIARQTAQGMDYLH---AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWS 186 (307)
T ss_dssp CCSSCBHHHHHHTSC--CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCSSSEEECTTSCEEECCCCSSCC-----
T ss_pred cCCCCcHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHH---hCCEeeCCCChhhEEEcCCCCEEEccCCCceeccccc
Confidence 999999999997543 36899999999999999999999 679999999999999999999999999999765422
Q ss_pred -CCCccccccccccccccccc---cCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCC
Q 011005 362 -SSNRTLLAGTYGYIAPELAY---TMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVD 437 (496)
Q Consensus 362 -~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (496)
........||+.|+|||++. +..++.++||||||+++|||++|+.||..... ..............+...
T Consensus 187 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~------~~~~~~~~~~~~~~~~~~ 260 (307)
T 3lb7_A 187 GSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINN------RDQIIFMVGRGYASPDLS 260 (307)
T ss_dssp -------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCC------HHHHHHHHHHTCCCCCST
T ss_pred ccccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCc------HHHHHHHHhcCCCCcchh
Confidence 12233457999999999986 66788999999999999999999999963221 111111111121221111
Q ss_pred hhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccC
Q 011005 438 RKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKT 478 (496)
Q Consensus 438 ~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~ 478 (496)
.........+.+++.+||+.||++|||+.|++++++.....
T Consensus 261 ~~~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~~ 301 (307)
T 3lb7_A 261 KLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHS 301 (307)
T ss_dssp TSCSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHTT
T ss_pred hhhcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHHhh
Confidence 11111223578999999999999999999999999987654
No 77
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.9e-44 Score=352.93 Aligned_cols=258 Identities=22% Similarity=0.366 Sum_probs=203.5
Q ss_pred hCCCCcceeeecCCeeEEEEEeCCCcEEEEEEcccch-hHHHHHHHHHHHHHHHhhcc--cccccccceeecCCeEEEEE
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSE-ELAFIKSFKNEAQVLSQVLH--RNIVKLYGYCLHKKCMFLIY 281 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h--~niv~~~~~~~~~~~~~lV~ 281 (496)
++|++.+.||+|+||.||+|...+++.||||++.... .....+.+.+|+.++++++| +||+++++++..+...++||
T Consensus 9 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 88 (343)
T 3dbq_A 9 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 88 (343)
T ss_dssp CEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEE
Confidence 5689999999999999999998899999999987543 33445778999999999986 99999999999999999999
Q ss_pred EecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCC
Q 011005 282 EYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHAD 361 (496)
Q Consensus 282 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 361 (496)
| +.+++|.+++.... .+++..+..++.||+.||.||| +.+|+||||||+|||++ ++.+||+|||+++.....
T Consensus 89 e-~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~al~~lH---~~~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~ 160 (343)
T 3dbq_A 89 E-CGNIDLNSWLKKKK---SIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPD 160 (343)
T ss_dssp C-CCSEEHHHHHHHSC---CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEE-TTEEEECCCSSSCCC---
T ss_pred e-CCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCcceEEEE-CCcEEEeecccccccCcc
Confidence 9 56889999998654 6899999999999999999999 67999999999999997 578999999999876543
Q ss_pred CCC--cccccccccccccccccc-----------CCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhh
Q 011005 362 SSN--RTLLAGTYGYIAPELAYT-----------MVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVL 428 (496)
Q Consensus 362 ~~~--~~~~~gt~~y~aPE~~~~-----------~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~ 428 (496)
... ....+||+.|+|||++.+ ..++.++||||||+++|+|++|+.||.... ..........
T Consensus 161 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~------~~~~~~~~~~ 234 (343)
T 3dbq_A 161 TTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII------NQISKLHAII 234 (343)
T ss_dssp ---------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCC------SHHHHHHHHH
T ss_pred cccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhh------hHHHHHHHHh
Confidence 321 234679999999999865 678899999999999999999999996321 1111222222
Q ss_pred cCCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCC
Q 011005 429 DQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTP 479 (496)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~ 479 (496)
............ ...+.+++.+||+.||++|||+.|+++|+|+.....
T Consensus 235 ~~~~~~~~~~~~---~~~l~~li~~~L~~dp~~Rpt~~e~l~hp~~~~~~~ 282 (343)
T 3dbq_A 235 DPNHEIEFPDIP---EKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTH 282 (343)
T ss_dssp CTTSCCCCCCCS---CHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHSCCC
T ss_pred cCCcccCCcccC---CHHHHHHHHHHcCCChhHCCCHHHHHhCccccccCC
Confidence 222221111111 124678999999999999999999999999986544
No 78
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=2.2e-44 Score=340.20 Aligned_cols=255 Identities=25% Similarity=0.386 Sum_probs=208.7
Q ss_pred hCCCCcceeeecCCeeEEEEEeCCCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEec
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEYM 284 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~~ 284 (496)
++|++.+.||+|+||+||+|.+.+++.||+|++...... .+.+.+|++++++++||||+++++++.+....++||||+
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~--~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 87 (269)
T 4hcu_A 10 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMS--EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFM 87 (269)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSBC--HHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred hhceeeheecCCCccEEEEEEecCCCeEEEEEecccccC--HHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeC
Confidence 578899999999999999999988999999999865432 256889999999999999999999999999999999999
Q ss_pred CCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCC-
Q 011005 285 ERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSS- 363 (496)
Q Consensus 285 ~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~- 363 (496)
++++|.+++.... ..+++..++.++.|++.||+||| +.+++||||||+||+++.++.++|+|||+++.......
T Consensus 88 ~~~~L~~~l~~~~--~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 162 (269)
T 4hcu_A 88 EHGCLSDYLRTQR--GLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT 162 (269)
T ss_dssp TTCBHHHHHHTTT--TCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHH
T ss_pred CCCcHHHHHHhcC--cccCHHHHHHHHHHHHHHHHHHH---hCCeecCCcchheEEEcCCCCEEeccccccccccccccc
Confidence 9999999997643 25899999999999999999999 77999999999999999999999999999986643211
Q ss_pred CccccccccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHHH
Q 011005 364 NRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVIR 442 (496)
Q Consensus 364 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (496)
......+|+.|+|||.+.+..++.++||||+|+++|+|++ |+.||.... ........... ........
T Consensus 163 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~-------~~~~~~~~~~~-~~~~~~~~--- 231 (269)
T 4hcu_A 163 SSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRS-------NSEVVEDISTG-FRLYKPRL--- 231 (269)
T ss_dssp STTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC-------HHHHHHHHHTT-CCCCCCTT---
T ss_pred cccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCC-------HHHHHHHHhcC-ccCCCCCc---
Confidence 1223456778999999999999999999999999999999 999986321 12222222222 11111111
Q ss_pred HHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhcc
Q 011005 443 DILLISTVSFACLQSNPKSRPTMQSVSQEFLITRK 477 (496)
Q Consensus 443 ~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~ 477 (496)
....+.+++.+||+.||++|||+.|+++++....+
T Consensus 232 ~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~ 266 (269)
T 4hcu_A 232 ASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 266 (269)
T ss_dssp SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHH
Confidence 12247789999999999999999999999977654
No 79
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=3.1e-44 Score=340.73 Aligned_cols=262 Identities=21% Similarity=0.304 Sum_probs=213.3
Q ss_pred HHhCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEE
Q 011005 203 ATEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIY 281 (496)
Q Consensus 203 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~ 281 (496)
..++|++.+.||+|+||.||+|.++ ++..||+|++...... ..+.+.+|++++++++||||+++++++..+...++||
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 85 (277)
T 3f3z_A 7 INQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVE-DVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVM 85 (277)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCS-CHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccc-hHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEE
Confidence 4578999999999999999999765 5778999998764322 2467889999999999999999999999999999999
Q ss_pred EecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEe---cCCCCeEEccccccccc
Q 011005 282 EYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILL---NSKLEAFVADFGTARLL 358 (496)
Q Consensus 282 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~---~~~~~~kl~Dfg~~~~~ 358 (496)
||+++++|.+++.... .+++..++.++.|++.||+||| +.+++||||||+||++ +.++.++|+|||++...
T Consensus 86 e~~~~~~L~~~~~~~~---~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~ 159 (277)
T 3f3z_A 86 ELCTGGELFERVVHKR---VFRESDAARIMKDVLSAVAYCH---KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARF 159 (277)
T ss_dssp ECCCSCBHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEEC
T ss_pred eccCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHEEEecCCCCCcEEEEecccceec
Confidence 9999999999887643 6899999999999999999999 7799999999999999 78899999999999876
Q ss_pred cCCCCCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCCh
Q 011005 359 HADSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDR 438 (496)
Q Consensus 359 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (496)
.... ......||+.|+|||.+.+. ++.++||||+|+++|+|++|+.||.... ...............+. .
T Consensus 160 ~~~~-~~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~-------~~~~~~~~~~~~~~~~~-~ 229 (277)
T 3f3z_A 160 KPGK-MMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPT-------DSEVMLKIREGTFTFPE-K 229 (277)
T ss_dssp CTTS-CBCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSS-------HHHHHHHHHHCCCCCCH-H
T ss_pred cCcc-chhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCC-------HHHHHHHHHhCCCCCCc-h
Confidence 5432 33445799999999998765 8999999999999999999999996321 22222233333222211 1
Q ss_pred hHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCCCC
Q 011005 439 KVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTPLV 481 (496)
Q Consensus 439 ~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~~~ 481 (496)
........+.+++.+||+.||++|||+.|+++|+|+.......
T Consensus 230 ~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~~~~ 272 (277)
T 3f3z_A 230 DWLNVSPQAESLIRRLLTKSPKQRITSLQALEHEWFEKQLSSS 272 (277)
T ss_dssp HHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHHHHHHHCCS
T ss_pred hhhcCCHHHHHHHHHHccCChhhCcCHHHHhcCHHHhcccccc
Confidence 1112234578999999999999999999999999998765543
No 80
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=2.4e-44 Score=361.25 Aligned_cols=260 Identities=24% Similarity=0.309 Sum_probs=198.0
Q ss_pred HHHhCCCCcceeeecCCeeEEEEEe-CCCcEEEEEEcccch-------hHHHHHHHHHHHHHHHhhcccccccccceeec
Q 011005 202 EATEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSE-------ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLH 273 (496)
Q Consensus 202 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-------~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~ 273 (496)
...++|.+.+.||+|+||+||+|.. .+++.||+|++.... .......+.+|+.++++++||||+++++++..
T Consensus 132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~ 211 (419)
T 3i6u_A 132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA 211 (419)
T ss_dssp HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES
T ss_pred hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec
Confidence 3568999999999999999999965 468999999987542 11222357899999999999999999999854
Q ss_pred CCeEEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCC---CeEEc
Q 011005 274 KKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKL---EAFVA 350 (496)
Q Consensus 274 ~~~~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~---~~kl~ 350 (496)
+..++||||+++|+|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+|||++.++ .+||+
T Consensus 212 -~~~~lv~e~~~~g~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~LH---~~~ivHrDlkp~NIll~~~~~~~~~kl~ 284 (419)
T 3i6u_A 212 -EDYYIVLELMEGGELFDKVVGNK---RLKEATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKIT 284 (419)
T ss_dssp -SEEEEEEECCTTCBGGGGTSSSC---CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESSSSSSCCEEEC
T ss_pred -CceEEEEEcCCCCcHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEecCCCcceEEEe
Confidence 45789999999999999887654 6899999999999999999999 67999999999999997544 59999
Q ss_pred cccccccccCCCCCcccccccccccccccccc---CCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhh
Q 011005 351 DFGTARLLHADSSNRTLLAGTYGYIAPELAYT---MVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDV 427 (496)
Q Consensus 351 Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~ 427 (496)
|||+++..... ......+||+.|+|||++.+ ..++.++||||+|+++|+|++|+.||.... ........
T Consensus 285 DFG~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~-------~~~~~~~~ 356 (419)
T 3i6u_A 285 DFGHSKILGET-SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR-------TQVSLKDQ 356 (419)
T ss_dssp CSSTTTSCC------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCS-------SSCCHHHH
T ss_pred ecccceecCCC-ccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCc-------chHHHHHH
Confidence 99999876433 22345679999999999864 567889999999999999999999996321 11112222
Q ss_pred hcCCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhc
Q 011005 428 LDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITR 476 (496)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~ 476 (496)
+..................+.+++.+||+.||++|||++|+++|+|+..
T Consensus 357 i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~~ 405 (419)
T 3i6u_A 357 ITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 405 (419)
T ss_dssp HHTTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGCC
T ss_pred HhcCCCCCCchhhcccCHHHHHHHHHHccCChhHCcCHHHHhCCcccCC
Confidence 2222111111111122345789999999999999999999999999864
No 81
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=4.7e-44 Score=352.73 Aligned_cols=263 Identities=25% Similarity=0.335 Sum_probs=205.7
Q ss_pred HHhCCCCcceeeecCCeeEEEEEe-CCCcEEEEEEcccchhHHHHHHHHHHHHHHHhhc-----ccccccccceeecCCe
Q 011005 203 ATEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVL-----HRNIVKLYGYCLHKKC 276 (496)
Q Consensus 203 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~-----h~niv~~~~~~~~~~~ 276 (496)
..++|.+.+.||+|+||+||+|.+ .+++.||||++..... ....+..|+.+++.+. ||||+++++++...+.
T Consensus 33 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~~ 110 (360)
T 3llt_A 33 LNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKK--YTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDH 110 (360)
T ss_dssp ETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCHH--HHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETTE
T ss_pred ecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccchh--hhhhhHHHHHHHHHhcccCCCCCCeecccceeeECCe
Confidence 467899999999999999999976 4789999999975432 3356788999999996 9999999999999999
Q ss_pred EEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecC-------------
Q 011005 277 MFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNS------------- 343 (496)
Q Consensus 277 ~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~------------- 343 (496)
.++||||+ +++|.+++...... .+++..+..++.||+.||+||| +.+|+||||||+|||++.
T Consensus 111 ~~lv~e~~-~~~L~~~~~~~~~~-~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~~~~~~~~~~ 185 (360)
T 3llt_A 111 MCLIFEPL-GPSLYEIITRNNYN-GFHIEDIKLYCIEILKALNYLR---KMSLTHTDLKPENILLDDPYFEKSLITVRRV 185 (360)
T ss_dssp EEEEECCC-CCBHHHHHHHTTTC-CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCTTCCEEEEEEECT
T ss_pred eEEEEcCC-CCCHHHHHHhcCCC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCcccEEEccccccccccchhcc
Confidence 99999999 89999999865432 5899999999999999999999 779999999999999975
Q ss_pred ------------CCCeEEccccccccccCCCCCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccc
Q 011005 344 ------------KLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDIL 411 (496)
Q Consensus 344 ------------~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~ 411 (496)
++.+||+|||+++..... .....||+.|+|||++.+..++.++||||+||++|+|++|+.||...
T Consensus 186 ~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~ 262 (360)
T 3llt_A 186 TDGKKIQIYRTKSTGIKLIDFGCATFKSDY---HGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTH 262 (360)
T ss_dssp TTCCEEEEEEESCCCEEECCCTTCEETTSC---CCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred cccccccccccCCCCEEEEeccCceecCCC---CcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCCC
Confidence 788999999999865432 23457899999999999999999999999999999999999999642
Q ss_pred cccC--------CCCCCcchhHhhh-------------cCCCCCCCChhH-H------------HHHHHHHHHHHhcccC
Q 011005 412 SSLS--------SSSDPKIMLIDVL-------------DQRLPPPVDRKV-I------------RDILLISTVSFACLQS 457 (496)
Q Consensus 412 ~~~~--------~~~~~~~~~~~~~-------------~~~~~~~~~~~~-~------------~~~~~l~~li~~cl~~ 457 (496)
.... ....+........ ....+....... . .....+.+|+.+||+.
T Consensus 263 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~ 342 (360)
T 3llt_A 263 EHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYSILQI 342 (360)
T ss_dssp SHHHHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHHHHHCCS
T ss_pred cHHHHHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHHHHHHHHHHhcC
Confidence 2110 0000000000000 000010000000 0 0013467999999999
Q ss_pred CCCCCCCHHHHHHHHHHh
Q 011005 458 NPKSRPTMQSVSQEFLIT 475 (496)
Q Consensus 458 dP~~Rps~~evl~~~~~~ 475 (496)
||++|||++|+++|+|+.
T Consensus 343 dP~~Rpta~elL~hp~f~ 360 (360)
T 3llt_A 343 DPTLRPSPAELLKHKFLE 360 (360)
T ss_dssp SGGGSCCHHHHTTSGGGC
T ss_pred ChhhCCCHHHHhcCcccC
Confidence 999999999999999973
No 82
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=3.4e-44 Score=347.95 Aligned_cols=259 Identities=24% Similarity=0.311 Sum_probs=211.3
Q ss_pred HHhCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchhH-----HHHHHHHHHHHHHHhhcccccccccceeecCCe
Q 011005 203 ATEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEEL-----AFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKC 276 (496)
Q Consensus 203 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-----~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 276 (496)
..++|++.+.||+|+||.||+|..+ +|+.||+|.+...... ...+.+.+|+.+++.++||||+++++++.....
T Consensus 10 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 89 (321)
T 2a2a_A 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTD 89 (321)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred hhccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCE
Confidence 3567999999999999999999765 6899999998764321 124678899999999999999999999999999
Q ss_pred EEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCC----CeEEccc
Q 011005 277 MFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKL----EAFVADF 352 (496)
Q Consensus 277 ~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~----~~kl~Df 352 (496)
.++||||+++++|.+++.... .+++..++.++.|++.||+||| +.+++||||||+||+++.++ .++|+||
T Consensus 90 ~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~lH---~~~ivH~dikp~NIl~~~~~~~~~~~kl~Df 163 (321)
T 2a2a_A 90 VVLILELVSGGELFDFLAQKE---SLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDF 163 (321)
T ss_dssp EEEEECCCCSCBHHHHHHTCS---CEEHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESCTTSSSCCEEECCC
T ss_pred EEEEEEcCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCChHHEEEecCCCCcCCEEEccC
Confidence 999999999999999998643 6899999999999999999999 67999999999999999887 7999999
Q ss_pred cccccccCCCCCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCC
Q 011005 353 GTARLLHADSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRL 432 (496)
Q Consensus 353 g~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (496)
|++....... ......||+.|+|||++.+..++.++||||+|+++|+|++|+.||.... .............
T Consensus 164 g~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-------~~~~~~~i~~~~~ 235 (321)
T 2a2a_A 164 GLAHEIEDGV-EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT-------KQETLANITSVSY 235 (321)
T ss_dssp TTCEECCTTC-CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSS-------HHHHHHHHHTTCC
T ss_pred ccceecCccc-cccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCC-------HHHHHHHHHhccc
Confidence 9998765432 2344578999999999999999999999999999999999999996321 1112222222221
Q ss_pred CCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhc
Q 011005 433 PPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITR 476 (496)
Q Consensus 433 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~ 476 (496)
..+ ..........+.+++.+||+.||++|||+.|+++|+|+..
T Consensus 236 ~~~-~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~hp~~~~ 278 (321)
T 2a2a_A 236 DFD-EEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPWITP 278 (321)
T ss_dssp CCC-HHHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHHSTTTSC
T ss_pred ccC-hhhhcccCHHHHHHHHHHcCCChhhCcCHHHHhcCccccC
Confidence 111 1111112235789999999999999999999999999864
No 83
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=3.5e-45 Score=364.44 Aligned_cols=260 Identities=24% Similarity=0.338 Sum_probs=210.7
Q ss_pred HHHHHHhCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchh--HHHHHHHHHHHHHHHhhcccccccccceeecCC
Q 011005 199 DLIEATEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEE--LAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKK 275 (496)
Q Consensus 199 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~ 275 (496)
++....++|++.+.||+|+||+||+|.++ +++.||+|++..... ......+.+|+.+++.++||||+++++++.+..
T Consensus 63 ~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~ 142 (410)
T 3v8s_A 63 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDR 142 (410)
T ss_dssp HHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred hcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECC
Confidence 33445678999999999999999999775 588999999876331 112234789999999999999999999999999
Q ss_pred eEEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEcccccc
Q 011005 276 CMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTA 355 (496)
Q Consensus 276 ~~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~ 355 (496)
..++||||++||+|.+++... .+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||++
T Consensus 143 ~~~lV~E~~~gg~L~~~l~~~----~~~e~~~~~~~~qi~~aL~~LH---~~givHrDLKp~NILl~~~g~ikL~DFG~a 215 (410)
T 3v8s_A 143 YLYMVMEYMPGGDLVNLMSNY----DVPEKWARFYTAEVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTC 215 (410)
T ss_dssp EEEEEECCCTTEEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred EEEEEEeCCCCCcHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeeECCCCCEEEecccee
Confidence 999999999999999999753 5899999999999999999999 779999999999999999999999999999
Q ss_pred ccccCCCC-CccccccccccccccccccCC----cCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcC
Q 011005 356 RLLHADSS-NRTLLAGTYGYIAPELAYTMV----MTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQ 430 (496)
Q Consensus 356 ~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~----~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 430 (496)
+....... .....+||+.|+|||++.+.. ++.++|||||||++|||++|+.||.... .......+...
T Consensus 216 ~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~-------~~~~~~~i~~~ 288 (410)
T 3v8s_A 216 MKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADS-------LVGTYSKIMNH 288 (410)
T ss_dssp EECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSS-------HHHHHHHHHTH
T ss_pred EeeccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCC-------hhhHHHHHHhc
Confidence 87654332 233568999999999998765 8899999999999999999999996321 12222222221
Q ss_pred ----CCCCCCChhHHHHHHHHHHHHHhcccCCCCC--CCCHHHHHHHHHHhcc
Q 011005 431 ----RLPPPVDRKVIRDILLISTVSFACLQSNPKS--RPTMQSVSQEFLITRK 477 (496)
Q Consensus 431 ----~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--Rps~~evl~~~~~~~~ 477 (496)
..+.... ....+.+|+.+||+.+|.+ ||+++|+++|+|+...
T Consensus 289 ~~~~~~p~~~~-----~s~~~~~li~~lL~~~~~rlgR~~~~ei~~Hp~f~~~ 336 (410)
T 3v8s_A 289 KNSLTFPDDND-----ISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKND 336 (410)
T ss_dssp HHHCCCCTTCC-----CCHHHHHHHHHHSSCGGGCTTSSCHHHHHTSGGGCCS
T ss_pred cccccCCCccc-----ccHHHHHHHHHHccChhhhCCCCCHHHHhcCccccCC
Confidence 1221100 1124678999999999988 9999999999999753
No 84
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=3.4e-44 Score=346.21 Aligned_cols=252 Identities=23% Similarity=0.253 Sum_probs=198.4
Q ss_pred HhCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccch-hHHHHHHHHHHHHHHHhh-cccccccccceeecCCeEEEE
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSE-ELAFIKSFKNEAQVLSQV-LHRNIVKLYGYCLHKKCMFLI 280 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lV 280 (496)
.++|++.+.||+|+||+||+|.+. +++.||||++.... ..........|+..+.++ +||||+++++++.+++..++|
T Consensus 56 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv 135 (311)
T 3p1a_A 56 QQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQ 135 (311)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEE
Confidence 467999999999999999999776 79999999986532 222334455666666666 899999999999999999999
Q ss_pred EEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccC
Q 011005 281 YEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHA 360 (496)
Q Consensus 281 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 360 (496)
|||+ +++|.+++.... ..+++..++.++.|++.||+||| +.+|+||||||+|||++.++.+||+|||++.....
T Consensus 136 ~e~~-~~~L~~~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~ 209 (311)
T 3p1a_A 136 TELC-GPSLQQHCEAWG--ASLPEAQVWGYLRDTLLALAHLH---SQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGT 209 (311)
T ss_dssp EECC-CCBHHHHHHHHC--SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECGGGCEEECCCTTCEECC-
T ss_pred Eecc-CCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEECCCCCEEEccceeeeeccc
Confidence 9999 679988887543 26899999999999999999999 67999999999999999999999999999987643
Q ss_pred CCCCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhH
Q 011005 361 DSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKV 440 (496)
Q Consensus 361 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 440 (496)
.. ......||+.|+|||++.+ .++.++||||||+++|||++|..|+.... ..........+. ...
T Consensus 210 ~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~----------~~~~~~~~~~~~---~~~ 274 (311)
T 3p1a_A 210 AG-AGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGE----------GWQQLRQGYLPP---EFT 274 (311)
T ss_dssp ------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHH----------HHHHHTTTCCCH---HHH
T ss_pred CC-CCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCcc----------HHHHHhccCCCc---ccc
Confidence 32 2344569999999999876 78999999999999999999976653211 111111111111 001
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhc
Q 011005 441 IRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITR 476 (496)
Q Consensus 441 ~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~ 476 (496)
......+.+++.+||+.||++|||++|+++|+|+..
T Consensus 275 ~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 310 (311)
T 3p1a_A 275 AGLSSELRSVLVMMLEPDPKLRATAEALLALPVLRQ 310 (311)
T ss_dssp TTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGSC
T ss_pred cCCCHHHHHHHHHHcCCChhhCcCHHHHHhCccccC
Confidence 112235789999999999999999999999999864
No 85
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=5.4e-44 Score=343.24 Aligned_cols=259 Identities=26% Similarity=0.405 Sum_probs=199.4
Q ss_pred HhCCCCcceeeecCCeeEEEEEeCCCcEEEEEEcccchhHHHHHHHHHHHHHHHh--hcccccccccceeec----CCeE
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQ--VLHRNIVKLYGYCLH----KKCM 277 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~~~~~~~~----~~~~ 277 (496)
.++|++.+.||+|+||+||+|.+ +++.||||++..... ..+.+|.+++.. ++||||+++++++.. ....
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~----~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ 81 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSRDE----KSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQL 81 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGGGH----HHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccccc----hhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCcee
Confidence 46899999999999999999988 689999999876542 445667777766 789999999998654 3468
Q ss_pred EEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCC-----CCCeEEeCCCCCceEecCCCCeEEccc
Q 011005 278 FLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDC-----SPSIIHRDISSNNILLNSKLEAFVADF 352 (496)
Q Consensus 278 ~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~-----~~~i~H~dlkp~Nil~~~~~~~kl~Df 352 (496)
++||||+++|+|.+++... .+++..++.++.|++.||+|||+.. +++|+||||||+|||++.++.+||+||
T Consensus 82 ~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~Df 157 (301)
T 3q4u_A 82 WLITHYHEMGSLYDYLQLT----TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADL 157 (301)
T ss_dssp EEEECCCTTCBHHHHHTTC----CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCC
T ss_pred EEehhhccCCCHHHHHhhc----ccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEEeeC
Confidence 9999999999999999643 6899999999999999999999321 458999999999999999999999999
Q ss_pred cccccccCCCCC----ccccccccccccccccccC------CcCcccchhhHHHHHHHHHhC----------CCCCcccc
Q 011005 353 GTARLLHADSSN----RTLLAGTYGYIAPELAYTM------VMTEKCDVYSFGVVTLEVLMG----------KHPRDILS 412 (496)
Q Consensus 353 g~~~~~~~~~~~----~~~~~gt~~y~aPE~~~~~------~~~~~~DvwslG~il~el~~g----------~~p~~~~~ 412 (496)
|+++........ .....||+.|+|||++.+. .++.++||||||+++|||++| +.||....
T Consensus 158 g~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~ 237 (301)
T 3q4u_A 158 GLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVV 237 (301)
T ss_dssp TTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTS
T ss_pred CCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccC
Confidence 999876543322 2234799999999999877 556799999999999999999 66664322
Q ss_pred ccCCCCCCcchhHhhh-cCCCCCCCCh--hHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHH
Q 011005 413 SLSSSSDPKIMLIDVL-DQRLPPPVDR--KVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLI 474 (496)
Q Consensus 413 ~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~ 474 (496)
.. ........... .....+.... ........+.+++.+||+.||++|||+.|+++.+..
T Consensus 238 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~ 299 (301)
T 3q4u_A 238 PN---DPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTK 299 (301)
T ss_dssp CS---SCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHH
T ss_pred CC---CcchhhhhHHHhccCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhc
Confidence 11 11111111111 1111111111 122344568899999999999999999999998864
No 86
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=5.2e-44 Score=355.36 Aligned_cols=258 Identities=22% Similarity=0.357 Sum_probs=204.8
Q ss_pred hCCCCcceeeecCCeeEEEEEeCCCcEEEEEEcccch-hHHHHHHHHHHHHHHHhhc--ccccccccceeecCCeEEEEE
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSE-ELAFIKSFKNEAQVLSQVL--HRNIVKLYGYCLHKKCMFLIY 281 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~--h~niv~~~~~~~~~~~~~lV~ 281 (496)
.+|.+.+.||+|+||.||+|...+++.||||++.... .....+.+.+|+.++++++ ||||+++++++...+..++||
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 135 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 135 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEE
Confidence 4599999999999999999998889999999986543 3344577899999999996 599999999999999999999
Q ss_pred EecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCC
Q 011005 282 EYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHAD 361 (496)
Q Consensus 282 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 361 (496)
| +.+++|.+++.... .+++..+..++.||+.||.||| +.+|+||||||+|||++ ++.+||+|||+++.....
T Consensus 136 E-~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~lH---~~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~ 207 (390)
T 2zmd_A 136 E-CGNIDLNSWLKKKK---SIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPD 207 (390)
T ss_dssp E-CCSEEHHHHHHHCS---SCCHHHHHHHHHHHHHHHHHHH---TTTCCCCCCCGGGEEES-SSCEEECCCSSSCCC---
T ss_pred e-cCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHEEEE-CCeEEEEecCccccccCC
Confidence 9 66889999998654 6788999999999999999999 78999999999999996 578999999999876543
Q ss_pred CC--Ccccccccccccccccccc-----------CCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhh
Q 011005 362 SS--NRTLLAGTYGYIAPELAYT-----------MVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVL 428 (496)
Q Consensus 362 ~~--~~~~~~gt~~y~aPE~~~~-----------~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~ 428 (496)
.. .....+||+.|+|||++.+ ..++.++|||||||++|||++|+.||.... ..........
T Consensus 208 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~------~~~~~~~~~~ 281 (390)
T 2zmd_A 208 TTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII------NQISKLHAII 281 (390)
T ss_dssp ------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCC------CHHHHHHHHH
T ss_pred CccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhh------HHHHHHHHHh
Confidence 22 1234679999999999875 468899999999999999999999996321 1112223333
Q ss_pred cCCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCC
Q 011005 429 DQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTP 479 (496)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~ 479 (496)
............ ...+.+++.+||+.||++|||+.|+++|+|+.....
T Consensus 282 ~~~~~~~~~~~~---~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~~~~~ 329 (390)
T 2zmd_A 282 DPNHEIEFPDIP---EKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTH 329 (390)
T ss_dssp CTTSCCCCCCCS---CHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHSCC-
T ss_pred CccccCCCCccc---hHHHHHHHHHHcccChhhCCCHHHHhhCcCccccCc
Confidence 322221111111 124678999999999999999999999999986543
No 87
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.7e-44 Score=356.19 Aligned_cols=262 Identities=25% Similarity=0.341 Sum_probs=210.6
Q ss_pred HhCCCCcceeeecCCeeEEEEEeC------CCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeE
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLP------NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCM 277 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 277 (496)
.++|++.+.||+|+||+||+|.+. +++.||||++...........+.+|+.++++++||||+++++++......
T Consensus 70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~ 149 (367)
T 3l9p_A 70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 149 (367)
T ss_dssp GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence 467899999999999999999843 46789999997654445556788999999999999999999999999999
Q ss_pred EEEEEecCCCChhhhhhCCC----CCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCC---CeEEc
Q 011005 278 FLIYEYMERGSLFCNLHNNE----DAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKL---EAFVA 350 (496)
Q Consensus 278 ~lV~e~~~~g~L~~~l~~~~----~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~---~~kl~ 350 (496)
++||||+++|+|.+++.... ....+++..++.++.||+.||+||| +.+|+||||||+|||++.++ .+||+
T Consensus 150 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~~~~kL~ 226 (367)
T 3l9p_A 150 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIG 226 (367)
T ss_dssp EEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred EEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChhhEEEecCCCCceEEEC
Confidence 99999999999999997543 2235899999999999999999999 77999999999999999554 59999
Q ss_pred cccccccccCCC--CCccccccccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccCCCCCCcchhHhh
Q 011005 351 DFGTARLLHADS--SNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSSDPKIMLIDV 427 (496)
Q Consensus 351 Dfg~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~ 427 (496)
|||+++...... .......+|+.|+|||++.+..++.++|||||||++|||++ |..||.... ........
T Consensus 227 DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~-------~~~~~~~i 299 (367)
T 3l9p_A 227 DFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS-------NQEVLEFV 299 (367)
T ss_dssp CCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC-------HHHHHHHH
T ss_pred CCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCC-------HHHHHHHH
Confidence 999998653322 22334567899999999999999999999999999999998 999986321 11122222
Q ss_pred hcCCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCC
Q 011005 428 LDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTP 479 (496)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~ 479 (496)
......... .. ....+.+++.+||+.||++|||+.|++++++.....+
T Consensus 300 ~~~~~~~~~-~~---~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~~ 347 (367)
T 3l9p_A 300 TSGGRMDPP-KN---CPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP 347 (367)
T ss_dssp HTTCCCCCC-TT---CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCH
T ss_pred HcCCCCCCC-cc---CCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhCh
Confidence 222211111 11 1224778999999999999999999999999876643
No 88
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=4e-45 Score=354.81 Aligned_cols=269 Identities=20% Similarity=0.237 Sum_probs=199.1
Q ss_pred hCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEe
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEY 283 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~ 283 (496)
++|.+.+.||+|+||+||+|... +++.||+|++...........+.+|+.++++++||||+++++++..++..++||||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 81 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence 57889999999999999999765 78999999997654333223456899999999999999999999999999999999
Q ss_pred cCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCC
Q 011005 284 MERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSS 363 (496)
Q Consensus 284 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 363 (496)
++ |+|.+++..... .+++..+..++.||+.||.||| +.||+||||||+||+++.++.+||+|||+++.......
T Consensus 82 ~~-~~l~~~~~~~~~--~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~ 155 (324)
T 3mtl_A 82 LD-KDLKQYLDDCGN--IINMHNVKLFLFQLLRGLAYCH---RQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTK 155 (324)
T ss_dssp CS-EEHHHHHHHTTT--CCCHHHHHHHHHHHHHHHHHHH---HTTEEESSCCGGGEEECTTCCEEECSSSEEECC-----
T ss_pred cc-cCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHH---HCCccCCCcCHHHEEECCCCCEEEccCcccccccCCcc
Confidence 97 588888876432 5899999999999999999999 77999999999999999999999999999987654444
Q ss_pred Ccccccccccccccccccc-CCcCcccchhhHHHHHHHHHhCCCCCccccccC-------------CCCCCcc-hhHhhh
Q 011005 364 NRTLLAGTYGYIAPELAYT-MVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLS-------------SSSDPKI-MLIDVL 428 (496)
Q Consensus 364 ~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~-------------~~~~~~~-~~~~~~ 428 (496)
......||+.|+|||++.+ ..++.++||||+|+++|+|++|+.||....... ....+.. ......
T Consensus 156 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 235 (324)
T 3mtl_A 156 TYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFK 235 (324)
T ss_dssp -------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCHHHH
T ss_pred ccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcchhhc
Confidence 4455678999999999876 568999999999999999999999996432100 0000000 000000
Q ss_pred cCCCCCCCCh----hHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCC
Q 011005 429 DQRLPPPVDR----KVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTP 479 (496)
Q Consensus 429 ~~~~~~~~~~----~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~ 479 (496)
....+..... ........+.+|+.+||+.||++|||++|+++|+|+.....
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~ 290 (324)
T 3mtl_A 236 TYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLSLGE 290 (324)
T ss_dssp HTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGCS
T ss_pred ccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcChhhhhccc
Confidence 0000000000 00011234679999999999999999999999999987643
No 89
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=1.8e-44 Score=343.77 Aligned_cols=259 Identities=25% Similarity=0.354 Sum_probs=202.7
Q ss_pred HhCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEE
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYE 282 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e 282 (496)
.++|.+.+.||+|+||+||+|... +++.||+|++.........+.+.+|++++++++||||+++++++......++|||
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 100 (285)
T 3is5_A 21 DDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVME 100 (285)
T ss_dssp HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred hhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEE
Confidence 467999999999999999999764 6889999999776544445778999999999999999999999999999999999
Q ss_pred ecCCCChhhhhhCCC-CCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEe---cCCCCeEEccccccccc
Q 011005 283 YMERGSLFCNLHNNE-DAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILL---NSKLEAFVADFGTARLL 358 (496)
Q Consensus 283 ~~~~g~L~~~l~~~~-~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~---~~~~~~kl~Dfg~~~~~ 358 (496)
|+++|+|.+.+.... ....+++..++.++.|++.||+||| +.+|+||||||+||++ +.++.+||+|||++...
T Consensus 101 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~ 177 (285)
T 3is5_A 101 TCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFH---SQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELF 177 (285)
T ss_dssp CCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC-
T ss_pred eCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHH---hCCEEECCCCHHHEEEecCCCCCCEEEEeeecceec
Confidence 999999999885431 1236899999999999999999999 7799999999999999 45678999999999866
Q ss_pred cCCCCCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCCh
Q 011005 359 HADSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDR 438 (496)
Q Consensus 359 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (496)
.... ......||+.|+|||++. ..++.++||||+|+++|+|++|+.||.... ...................
T Consensus 178 ~~~~-~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~-------~~~~~~~~~~~~~~~~~~~ 248 (285)
T 3is5_A 178 KSDE-HSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTS-------LEEVQQKATYKEPNYAVEC 248 (285)
T ss_dssp ----------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSS-------HHHHHHHHHHCCCCCCC--
T ss_pred CCcc-cCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCC-------HHHHHhhhccCCccccccc
Confidence 4432 234457899999999876 468899999999999999999999996322 1111111111111111100
Q ss_pred hHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhc
Q 011005 439 KVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITR 476 (496)
Q Consensus 439 ~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~ 476 (496)
. .....+.+++.+||+.||++|||+.|+++|+|+.+
T Consensus 249 ~--~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~f~~ 284 (285)
T 3is5_A 249 R--PLTPQAVDLLKQMLTKDPERRPSAAQVLHHEWFKQ 284 (285)
T ss_dssp C--CCCHHHHHHHHHHTCSCTTTSCCHHHHHTSGGGGC
T ss_pred C--cCCHHHHHHHHHHccCChhhCcCHHHHhcCHHhhc
Confidence 0 01224678999999999999999999999999875
No 90
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=3.2e-44 Score=354.60 Aligned_cols=253 Identities=22% Similarity=0.274 Sum_probs=202.0
Q ss_pred cceeeecCCeeEEEEEe-CCCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEecCCCC
Q 011005 210 RYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEYMERGS 288 (496)
Q Consensus 210 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~~~~g~ 288 (496)
.+.||+|+||.||+|.. .+|+.||+|++..... ...+.+.+|+.++++++||||+++++++...+..++||||+++|+
T Consensus 94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~ 172 (373)
T 2x4f_A 94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGM-KDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGE 172 (373)
T ss_dssp EEECC-----CEEEEEETTTCCEEEEEEEECCSH-HHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCE
T ss_pred ceEEecCcCEEEEEEEEcCCCcEEEEEEEccccc-ccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCc
Confidence 56799999999999976 4689999999976542 234678999999999999999999999999999999999999999
Q ss_pred hhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEe--cCCCCeEEccccccccccCCCCCcc
Q 011005 289 LFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILL--NSKLEAFVADFGTARLLHADSSNRT 366 (496)
Q Consensus 289 L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~--~~~~~~kl~Dfg~~~~~~~~~~~~~ 366 (496)
|.+++.... ..+++..++.++.||+.||+||| +.+|+||||||+|||+ +.++.+||+|||+++...... ...
T Consensus 173 L~~~l~~~~--~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~-~~~ 246 (373)
T 2x4f_A 173 LFDRIIDES--YNLTELDTILFMKQICEGIRHMH---QMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPRE-KLK 246 (373)
T ss_dssp EHHHHHHTG--GGCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTC-BCC
T ss_pred HHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCcc-ccc
Confidence 999887532 36899999999999999999999 6799999999999999 567889999999998765432 233
Q ss_pred ccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHHHHHHH
Q 011005 367 LLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVIRDILL 446 (496)
Q Consensus 367 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (496)
...||+.|+|||++.+..++.++||||||+++|||++|+.||.... .......+.......+.. ........
T Consensus 247 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~-------~~~~~~~i~~~~~~~~~~-~~~~~~~~ 318 (373)
T 2x4f_A 247 VNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDN-------DAETLNNILACRWDLEDE-EFQDISEE 318 (373)
T ss_dssp CCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSS-------HHHHHHHHHHTCCCSCSG-GGTTSCHH
T ss_pred cccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCC-------HHHHHHHHHhccCCCChh-hhccCCHH
Confidence 4579999999999999999999999999999999999999996322 122233333333222111 11112235
Q ss_pred HHHHHHhcccCCCCCCCCHHHHHHHHHHhcc
Q 011005 447 ISTVSFACLQSNPKSRPTMQSVSQEFLITRK 477 (496)
Q Consensus 447 l~~li~~cl~~dP~~Rps~~evl~~~~~~~~ 477 (496)
+.+|+.+||+.||++|||+.|+++|+|+...
T Consensus 319 ~~~li~~~L~~dp~~Rps~~e~l~hp~~~~~ 349 (373)
T 2x4f_A 319 AKEFISKLLIKEKSWRISASEALKHPWLSDH 349 (373)
T ss_dssp HHHHHHTTSCSSGGGSCCHHHHHHSHHHHCH
T ss_pred HHHHHHHHcCCChhhCCCHHHHhcCcCcCCC
Confidence 7899999999999999999999999998754
No 91
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=1e-43 Score=360.58 Aligned_cols=263 Identities=24% Similarity=0.251 Sum_probs=199.9
Q ss_pred HhCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccch-hHHHHHHHHHHHHHHHhhcccccccccceeecC------C
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSE-ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHK------K 275 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~------~ 275 (496)
.++|++.+.||+|+||+||+|.+. +++.||||++.... .....+.+.+|+.+++.++||||+++++++... .
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 140 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 140 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence 468999999999999999999654 68999999997642 334456788999999999999999999999654 4
Q ss_pred eEEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEcccccc
Q 011005 276 CMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTA 355 (496)
Q Consensus 276 ~~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~ 355 (496)
..++||||+++ ++.+.+.. .+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||++
T Consensus 141 ~~~lv~E~~~~-~l~~~~~~-----~l~~~~~~~~~~qil~aL~~lH---~~~iiHrDlkp~NIll~~~~~~kl~DFG~a 211 (464)
T 3ttj_A 141 DVYLVMELMDA-NLCQVIQM-----ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLA 211 (464)
T ss_dssp EEEEEEECCSE-EHHHHHTS-----CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCCCC
T ss_pred eEEEEEeCCCC-CHHHHHhh-----cCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChHhEEEeCCCCEEEEEEEee
Confidence 67999999976 46666643 4789999999999999999999 779999999999999999999999999999
Q ss_pred ccccCCCCCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccC---------CCCC------C
Q 011005 356 RLLHADSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLS---------SSSD------P 420 (496)
Q Consensus 356 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~---------~~~~------~ 420 (496)
+..... ......+||+.|+|||++.+..++.++||||+||++|||++|+.||....... .... .
T Consensus 212 ~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~ 290 (464)
T 3ttj_A 212 RTAGTS-FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL 290 (464)
T ss_dssp -----C-CCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTS
T ss_pred eecCCC-cccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHc
Confidence 876433 23345689999999999999999999999999999999999999996432100 0000 0
Q ss_pred cchhHhhhcCC---------------CCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhc
Q 011005 421 KIMLIDVLDQR---------------LPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITR 476 (496)
Q Consensus 421 ~~~~~~~~~~~---------------~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~ 476 (496)
........... ..+............+.+|+.+||+.||++|||++|+++|+|+..
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~~~~ 361 (464)
T 3ttj_A 291 QPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINV 361 (464)
T ss_dssp CHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTGG
T ss_pred chhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcChhhhh
Confidence 00000111110 011111112222445789999999999999999999999999975
No 92
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=7.7e-44 Score=355.18 Aligned_cols=261 Identities=23% Similarity=0.328 Sum_probs=198.6
Q ss_pred HhCCCCc-ceeeecCCeeEEEEEeC-CCcEEEEEEcccchhHHHHHHHHHHHHHHHhh-cccccccccceeec----CCe
Q 011005 204 TEDFDIR-YCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFKNEAQVLSQV-LHRNIVKLYGYCLH----KKC 276 (496)
Q Consensus 204 ~~~~~~~-~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~----~~~ 276 (496)
.++|.+. +.||+|+||+||+|.++ +++.||||++... ..+.+|+.++.++ +||||+++++++.. ...
T Consensus 60 ~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~------~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~ 133 (400)
T 1nxk_A 60 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC------PKARREVELHWRASQCPHIVRIVDVYENLYAGRKC 133 (400)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEE
T ss_pred cccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc------hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcE
Confidence 3567666 68999999999999765 6899999998643 3456788887555 79999999998875 567
Q ss_pred EEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecC---CCCeEEcccc
Q 011005 277 MFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNS---KLEAFVADFG 353 (496)
Q Consensus 277 ~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~---~~~~kl~Dfg 353 (496)
.++||||++||+|.+++.... ...+++..+..++.||+.||.||| +.+|+||||||+|||++. ++.+||+|||
T Consensus 134 ~~lv~E~~~gg~L~~~l~~~~-~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG 209 (400)
T 1nxk_A 134 LLIVMECLDGGELFSRIQDRG-DQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFG 209 (400)
T ss_dssp EEEEEECCCSEEHHHHHHCC----CCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSTTCCEEECCCT
T ss_pred EEEEEEeCCCCcHHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCcCcceEEEecCCCCccEEEEecc
Confidence 899999999999999998643 235899999999999999999999 679999999999999998 7889999999
Q ss_pred ccccccCCCCCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCC
Q 011005 354 TARLLHADSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLP 433 (496)
Q Consensus 354 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (496)
+++..... ......+||+.|+|||++.+..++.++|||||||++|+|++|+.||........ .......+......
T Consensus 210 ~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~---~~~~~~~i~~~~~~ 285 (400)
T 1nxk_A 210 FAKETTSH-NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI---SPGMKTRIRMGQYE 285 (400)
T ss_dssp TCEECC------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSS---CCSHHHHHHHTCCC
T ss_pred cccccCCC-CccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccc---cHHHHHHHHcCccc
Confidence 99876432 223456789999999999999999999999999999999999999974332111 11112222222221
Q ss_pred CCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCC
Q 011005 434 PPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTP 479 (496)
Q Consensus 434 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~ 479 (496)
.+... .......+.+|+.+||+.||++|||+.|+++|+|+.....
T Consensus 286 ~~~~~-~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~~~~~ 330 (400)
T 1nxk_A 286 FPNPE-WSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTK 330 (400)
T ss_dssp CCTTT-TTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHTTTT
T ss_pred CCCcc-cccCCHHHHHHHHHHCCCChhHCcCHHHHhcCccccCCCC
Confidence 11100 0111234779999999999999999999999999987544
No 93
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=1.6e-44 Score=355.82 Aligned_cols=264 Identities=23% Similarity=0.338 Sum_probs=209.6
Q ss_pred HHHHHHhCCCCcceeeecCCeeEEEEEe------CCCcEEEEEEcccchhHHHHHHHHHHHHHHHhh-ccccccccccee
Q 011005 199 DLIEATEDFDIRYCIGTGGYGSVYKAQL------PNGKVFALKKLHTSEELAFIKSFKNEAQVLSQV-LHRNIVKLYGYC 271 (496)
Q Consensus 199 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~ 271 (496)
+.....++|.+.+.||+|+||.||+|.+ .+++.||||+++........+.+.+|+++++++ +||||+++++++
T Consensus 16 ~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~ 95 (359)
T 3vhe_A 16 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGAC 95 (359)
T ss_dssp HHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred cccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeeee
Confidence 3334568899999999999999999963 346899999998765555567899999999999 799999999998
Q ss_pred ecCC-eEEEEEEecCCCChhhhhhCCCC----------------------------------------------------
Q 011005 272 LHKK-CMFLIYEYMERGSLFCNLHNNED---------------------------------------------------- 298 (496)
Q Consensus 272 ~~~~-~~~lV~e~~~~g~L~~~l~~~~~---------------------------------------------------- 298 (496)
...+ ..++||||+++|+|.+++.....
T Consensus 96 ~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (359)
T 3vhe_A 96 TKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSD 175 (359)
T ss_dssp CSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC----------------------------------------------
T ss_pred ecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccch
Confidence 8755 48999999999999999986542
Q ss_pred -----------CccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCC--Cc
Q 011005 299 -----------AVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSS--NR 365 (496)
Q Consensus 299 -----------~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~--~~ 365 (496)
...+++..++.++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++....... ..
T Consensus 176 ~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~ 252 (359)
T 3vhe_A 176 VEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 252 (359)
T ss_dssp --------CTTTTCBCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC
T ss_pred hhhcccccchhccccCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChhhEEEcCCCcEEEEeccceeeecccccchhc
Confidence 112899999999999999999999 67999999999999999999999999999987644332 23
Q ss_pred cccccccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHHHHH
Q 011005 366 TLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVIRDI 444 (496)
Q Consensus 366 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (496)
....||+.|+|||++.+..++.++||||||+++|||++ |+.||.... ........+........... ..
T Consensus 253 ~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~-------~~~~~~~~~~~~~~~~~~~~---~~ 322 (359)
T 3vhe_A 253 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK-------IDEEFCRRLKEGTRMRAPDY---TT 322 (359)
T ss_dssp --CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC-------CSHHHHHHHHHTCCCCCCTT---CC
T ss_pred cccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccc-------hhHHHHHHHHcCCCCCCCCC---CC
Confidence 34568889999999999999999999999999999998 999986321 11112111111111111111 11
Q ss_pred HHHHHHHHhcccCCCCCCCCHHHHHHHHHHh
Q 011005 445 LLISTVSFACLQSNPKSRPTMQSVSQEFLIT 475 (496)
Q Consensus 445 ~~l~~li~~cl~~dP~~Rps~~evl~~~~~~ 475 (496)
..+.+++.+||+.||++|||+.|+++++...
T Consensus 323 ~~l~~li~~~l~~dP~~Rps~~ell~~L~~~ 353 (359)
T 3vhe_A 323 PEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 353 (359)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHccCChhhCCCHHHHHHHHHHH
Confidence 2477899999999999999999999998654
No 94
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=7.7e-44 Score=342.61 Aligned_cols=259 Identities=30% Similarity=0.433 Sum_probs=214.7
Q ss_pred HhCCCCcceeeecCCeeEEEEEe-CCCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEE
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYE 282 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e 282 (496)
.+.|++.+.||+|+||.||+|.. .+++.||+|.+.........+.+.+|+.+++.++||||+++++++......++|||
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 100 (303)
T 3a7i_A 21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIME 100 (303)
T ss_dssp GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEE
Confidence 45789999999999999999975 46899999999765544445778999999999999999999999999999999999
Q ss_pred ecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCC
Q 011005 283 YMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADS 362 (496)
Q Consensus 283 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 362 (496)
|+++++|.+++... .+++..+..++.|++.||.||| +.+++||||||+||+++.++.++|+|||++.......
T Consensus 101 ~~~~~~L~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~ 173 (303)
T 3a7i_A 101 YLGGGSALDLLEPG----PLDETQIATILREILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ 173 (303)
T ss_dssp CCTTEEHHHHHTTS----CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECBTTB
T ss_pred eCCCCcHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCChheEEECCCCCEEEeecccceecCccc
Confidence 99999999998753 6899999999999999999999 6799999999999999999999999999998776544
Q ss_pred CCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHHH
Q 011005 363 SNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVIR 442 (496)
Q Consensus 363 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (496)
.......|++.|+|||.+.+..++.++||||||+++|+|++|+.||..... ............+. ....
T Consensus 174 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-------~~~~~~~~~~~~~~-~~~~--- 242 (303)
T 3a7i_A 174 IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHP-------MKVLFLIPKNNPPT-LEGN--- 242 (303)
T ss_dssp CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH-------HHHHHHHHHSCCCC-CCSS---
T ss_pred cccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCH-------HHHHHHhhcCCCCC-Cccc---
Confidence 444556789999999999999999999999999999999999999863221 11111111111111 1110
Q ss_pred HHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCCC
Q 011005 443 DILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTPL 480 (496)
Q Consensus 443 ~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~~ 480 (496)
....+.+++.+||+.||++|||+.|+++|+|+.+....
T Consensus 243 ~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~~~~~~ 280 (303)
T 3a7i_A 243 YSKPLKEFVEACLNKEPSFRPTAKELLKHKFILRNAKK 280 (303)
T ss_dssp CCHHHHHHHHHHCCSSGGGSCCHHHHTTCHHHHHHCCC
T ss_pred cCHHHHHHHHHHcCCChhhCcCHHHHhhChhhhcCCCc
Confidence 11247789999999999999999999999999876543
No 95
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=5e-44 Score=349.99 Aligned_cols=258 Identities=27% Similarity=0.377 Sum_probs=208.6
Q ss_pred HhCCCCcceeeecCCeeEEEEEe-CCCcEEEEEEcccch--hHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEE
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLI 280 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV 280 (496)
.+.|...+.||+|+||+||+|.. .+++.||||++.... .....+.+.+|++++++++||||+++++++..++..++|
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 132 (348)
T 1u5q_A 53 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLV 132 (348)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEE
Confidence 35688899999999999999975 578999999986532 334456789999999999999999999999999999999
Q ss_pred EEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccC
Q 011005 281 YEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHA 360 (496)
Q Consensus 281 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 360 (496)
|||+. |++.+.+.... ..+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||+++....
T Consensus 133 ~e~~~-g~l~~~l~~~~--~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~ 206 (348)
T 1u5q_A 133 MEYCL-GSASDLLEVHK--KPLQEVEIAAVTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP 206 (348)
T ss_dssp EECCS-EEHHHHHHHHT--SCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSS
T ss_pred EecCC-CCHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEECCCCCEEEeeccCceecCC
Confidence 99997 58887775432 26899999999999999999999 67999999999999999999999999999976543
Q ss_pred CCCCccccccccccccccccc---cCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCC
Q 011005 361 DSSNRTLLAGTYGYIAPELAY---TMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVD 437 (496)
Q Consensus 361 ~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (496)
. ....||+.|+|||++. +..++.++||||||+++|||++|+.||..... ............+....
T Consensus 207 ~----~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~-------~~~~~~~~~~~~~~~~~ 275 (348)
T 1u5q_A 207 A----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA-------MSALYHIAQNESPALQS 275 (348)
T ss_dssp B----CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH-------HHHHHHHHHSCCCCCCC
T ss_pred C----CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCh-------HHHHHHHHhcCCCCCCC
Confidence 2 3457899999999985 56789999999999999999999999863221 11122222222221111
Q ss_pred hhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCCCC
Q 011005 438 RKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTPLV 481 (496)
Q Consensus 438 ~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~~~ 481 (496)
.. ....+.+++.+||+.||++|||++|+++|+|+.+..+..
T Consensus 276 ~~---~~~~l~~li~~~l~~dP~~Rps~~~ll~h~~~~~~~~~~ 316 (348)
T 1u5q_A 276 GH---WSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRERPPT 316 (348)
T ss_dssp TT---SCHHHHHHHHHHTCSSGGGSCCHHHHTTCHHHHSCCCTT
T ss_pred CC---CCHHHHHHHHHHcccChhhCcCHHHHhhChhhhccCCcc
Confidence 11 122467899999999999999999999999998876543
No 96
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=7.5e-44 Score=349.01 Aligned_cols=263 Identities=22% Similarity=0.364 Sum_probs=209.1
Q ss_pred HHhCCCCcceeeecCCeeEEEEEe------CCCcEEEEEEcccchhHHHHHHHHHHHHHHHhh-cccccccccceeecCC
Q 011005 203 ATEDFDIRYCIGTGGYGSVYKAQL------PNGKVFALKKLHTSEELAFIKSFKNEAQVLSQV-LHRNIVKLYGYCLHKK 275 (496)
Q Consensus 203 ~~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~ 275 (496)
..++|.+.+.||+|+||.||+|.+ .+++.||+|.+.........+.+.+|+.+++++ +||||+++++++...+
T Consensus 43 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~ 122 (344)
T 1rjb_A 43 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSG 122 (344)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred CHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCC
Confidence 357899999999999999999975 246689999998655444557789999999999 8999999999999999
Q ss_pred eEEEEEEecCCCChhhhhhCCCCC--------------------ccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCC
Q 011005 276 CMFLIYEYMERGSLFCNLHNNEDA--------------------VELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDIS 335 (496)
Q Consensus 276 ~~~lV~e~~~~g~L~~~l~~~~~~--------------------~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlk 335 (496)
..++||||+++|+|.+++...... ..+++..++.++.||+.||+||| +.||+|||||
T Consensus 123 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dik 199 (344)
T 1rjb_A 123 PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLE---FKSCVHRDLA 199 (344)
T ss_dssp SCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHH---HTTEEETTCS
T ss_pred ccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCC
Confidence 999999999999999999865421 24789999999999999999999 7799999999
Q ss_pred CCceEecCCCCeEEccccccccccCCCCC--ccccccccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCcccc
Q 011005 336 SNNILLNSKLEAFVADFGTARLLHADSSN--RTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILS 412 (496)
Q Consensus 336 p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~ 412 (496)
|+||+++.++.+||+|||++......... .....+|+.|+|||.+.+..++.++||||||+++|+|++ |..||....
T Consensus 200 p~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~ 279 (344)
T 1rjb_A 200 ARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIP 279 (344)
T ss_dssp GGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC
T ss_pred hhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCC
Confidence 99999999999999999999876544322 223457889999999999999999999999999999998 999996322
Q ss_pred ccCCCCCCcchhHhhhcCCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccC
Q 011005 413 SLSSSSDPKIMLIDVLDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKT 478 (496)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~ 478 (496)
........+........... ....+.+++.+||+.||++|||+.|+++++......
T Consensus 280 -------~~~~~~~~~~~~~~~~~~~~---~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~ 335 (344)
T 1rjb_A 280 -------VDANFYKLIQNGFKMDQPFY---ATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLAD 335 (344)
T ss_dssp -------CSHHHHHHHHTTCCCCCCTT---CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC--
T ss_pred -------cHHHHHHHHhcCCCCCCCCC---CCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHH
Confidence 12222222222222211111 123477899999999999999999999999876554
No 97
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=2e-44 Score=357.18 Aligned_cols=257 Identities=25% Similarity=0.384 Sum_probs=208.0
Q ss_pred HhCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEE
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYE 282 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e 282 (496)
.++|.+.+.||+|+||.||+|.++ +++.||||.++..........+.+|+.++++++||||+++++++..++..++|||
T Consensus 113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 192 (377)
T 3cbl_A 113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVME 192 (377)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEE
Confidence 467889999999999999999876 7899999999865444445678899999999999999999999999999999999
Q ss_pred ecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCC
Q 011005 283 YMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADS 362 (496)
Q Consensus 283 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 362 (496)
|+++|+|.+++.... ..+++..++.++.|++.||+||| +.+++||||||+|||++.++.+||+|||+++......
T Consensus 193 ~~~~g~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~ 267 (377)
T 3cbl_A 193 LVQGGDFLTFLRTEG--ARLRVKTLLQMVGDAAAGMEYLE---SKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGV 267 (377)
T ss_dssp CCTTCBHHHHHHHHG--GGCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCGGGCEECTTSE
T ss_pred cCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHH---HCCcCCcccCHHHEEEcCCCcEEECcCCCceecCCCc
Confidence 999999999997532 25899999999999999999999 7799999999999999999999999999997653321
Q ss_pred CC--ccccccccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccCCCCCCcchhHhhhcCCCCCCCChh
Q 011005 363 SN--RTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRK 439 (496)
Q Consensus 363 ~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 439 (496)
.. .....+++.|+|||.+.+..++.++||||||+++|||++ |..||..... ....+.+......+....
T Consensus 268 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~--------~~~~~~~~~~~~~~~~~~ 339 (377)
T 3cbl_A 268 YAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSN--------QQTREFVEKGGRLPCPEL 339 (377)
T ss_dssp EECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCH--------HHHHHHHHTTCCCCCCTT
T ss_pred eeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH--------HHHHHHHHcCCCCCCCCC
Confidence 11 112235678999999999999999999999999999998 9999864321 112222222111111111
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhc
Q 011005 440 VIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITR 476 (496)
Q Consensus 440 ~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~ 476 (496)
.+..+.+++.+||+.||++|||++++++.+....
T Consensus 340 ---~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~ 373 (377)
T 3cbl_A 340 ---CPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIR 373 (377)
T ss_dssp ---CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ---CCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHH
Confidence 1234778999999999999999999999887654
No 98
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.6e-44 Score=351.94 Aligned_cols=251 Identities=23% Similarity=0.343 Sum_probs=208.6
Q ss_pred HHhCCCCcceeeecCCeeEEEEEe-CCCcEEEEEEcccchh-------HHHHHHHHHHHHHHHhhcccccccccceeecC
Q 011005 203 ATEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSEE-------LAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHK 274 (496)
Q Consensus 203 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-------~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~ 274 (496)
..++|++.+.||+|+||+||+|.+ .+++.||||.+..... ......+.+|+.++++++||||+++++++...
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~ 101 (335)
T 3dls_A 22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQ 101 (335)
T ss_dssp HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeC
Confidence 467899999999999999999975 5789999999876431 11223567899999999999999999999999
Q ss_pred CeEEEEEEecCCC-ChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEcccc
Q 011005 275 KCMFLIYEYMERG-SLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFG 353 (496)
Q Consensus 275 ~~~~lV~e~~~~g-~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg 353 (496)
+..++||||+.+| +|.+++.... .+++..+..++.||+.||.||| ..+|+||||||+||+++.++.+||+|||
T Consensus 102 ~~~~lv~e~~~~g~~l~~~~~~~~---~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~Dfg 175 (335)
T 3dls_A 102 GFFQLVMEKHGSGLDLFAFIDRHP---RLDEPLASYIFRQLVSAVGYLR---LKDIIHRDIKDENIVIAEDFTIKLIDFG 175 (335)
T ss_dssp SEEEEEEECCTTSCBHHHHHHTCC---CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCT
T ss_pred CEEEEEEEeCCCCccHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---hCCeEEeccCHHHEEEcCCCcEEEeecc
Confidence 9999999999777 9999998654 6899999999999999999999 7799999999999999999999999999
Q ss_pred ccccccCCCCCccccccccccccccccccCCc-CcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCC
Q 011005 354 TARLLHADSSNRTLLAGTYGYIAPELAYTMVM-TEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRL 432 (496)
Q Consensus 354 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (496)
+++...... ......||+.|+|||++.+..+ +.++||||||+++|+|++|+.||...... .....
T Consensus 176 ~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-------------~~~~~ 241 (335)
T 3dls_A 176 SAAYLERGK-LFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET-------------VEAAI 241 (335)
T ss_dssp TCEECCTTC-CBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG-------------TTTCC
T ss_pred cceECCCCC-ceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH-------------Hhhcc
Confidence 998765433 3344679999999999998877 78999999999999999999999643221 11111
Q ss_pred CCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccC
Q 011005 433 PPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKT 478 (496)
Q Consensus 433 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~ 478 (496)
..+.. ....+.+++.+||+.||++|||+.|+++|+|+....
T Consensus 242 ~~~~~-----~~~~l~~li~~~L~~dP~~Rps~~ell~hp~~~~~~ 282 (335)
T 3dls_A 242 HPPYL-----VSKELMSLVSGLLQPVPERRTTLEKLVTDPWVTQPV 282 (335)
T ss_dssp CCSSC-----CCHHHHHHHHHHTCSSGGGSCCHHHHHHCTTTTCCC
T ss_pred CCCcc-----cCHHHHHHHHHHccCChhhCcCHHHHhcCccccCCc
Confidence 11111 112477899999999999999999999999997643
No 99
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=1.5e-43 Score=339.06 Aligned_cols=258 Identities=23% Similarity=0.364 Sum_probs=214.2
Q ss_pred HhCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccch--hHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEE
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLI 280 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV 280 (496)
.++|.+.+.||+|+||.||+|.++ +++.||+|.+.... .....+.+.+|+.+++.++||||+++++++...+..++|
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 93 (294)
T 2rku_A 14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 93 (294)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEE
Confidence 367899999999999999999775 58899999986542 234456788999999999999999999999999999999
Q ss_pred EEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccC
Q 011005 281 YEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHA 360 (496)
Q Consensus 281 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 360 (496)
|||+++++|.+++.... .+++..++.++.|++.||+||| +.+++||||||+||+++.++.+||+|||++.....
T Consensus 94 ~e~~~~~~L~~~~~~~~---~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~ 167 (294)
T 2rku_A 94 LELCRRRSLLELHKRRK---ALTEPEARYYLRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEY 167 (294)
T ss_dssp EECCTTCBHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECCS
T ss_pred EecCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEcCCCCEEEEeccCceeccc
Confidence 99999999999887543 6899999999999999999999 67999999999999999999999999999987755
Q ss_pred CCCCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhH
Q 011005 361 DSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKV 440 (496)
Q Consensus 361 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 440 (496)
.........||+.|+|||.+.+..++.++||||+|+++|+|++|+.||.... ...............+..
T Consensus 168 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~-------~~~~~~~~~~~~~~~~~~--- 237 (294)
T 2rku_A 168 DGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSC-------LKETYLRIKKNEYSIPKH--- 237 (294)
T ss_dssp TTCCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSS-------HHHHHHHHHTTCCCCCTT---
T ss_pred CccccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-------HHHHHHHHhhccCCCccc---
Confidence 4444555679999999999999999999999999999999999999986322 111122222222211111
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCC
Q 011005 441 IRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTP 479 (496)
Q Consensus 441 ~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~ 479 (496)
....+.+++.+||+.||++|||++|+++|+|+.....
T Consensus 238 --~~~~~~~li~~~l~~~p~~Rps~~~ll~~~~~~~~~~ 274 (294)
T 2rku_A 238 --INPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYI 274 (294)
T ss_dssp --SCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHTSCC
T ss_pred --cCHHHHHHHHHHcccChhhCcCHHHHhhChheecCCc
Confidence 1124678999999999999999999999999987643
No 100
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=1.3e-43 Score=337.70 Aligned_cols=264 Identities=28% Similarity=0.415 Sum_probs=215.3
Q ss_pred HhCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchh--HHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEE
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEE--LAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLI 280 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV 280 (496)
.++|++.+.||+|+||.||+|... +++.||+|.+..... ......+.+|+.++++++||||+++++++...+..++|
T Consensus 13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 92 (284)
T 2vgo_A 13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLM 92 (284)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEE
Confidence 367999999999999999999765 678899999865432 22346788999999999999999999999999999999
Q ss_pred EEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccC
Q 011005 281 YEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHA 360 (496)
Q Consensus 281 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 360 (496)
|||+++|+|.+++.... .+++..++.++.|++.||.||| +.+++||||||+||+++.++.++|+|||++.....
T Consensus 93 ~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~ 166 (284)
T 2vgo_A 93 LEFAPRGELYKELQKHG---RFDEQRSATFMEELADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPS 166 (284)
T ss_dssp ECCCTTEEHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECTTCCEEECCCTTCEECSS
T ss_pred EEeCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEEcCCCCEEEecccccccCcc
Confidence 99999999999987643 6899999999999999999999 78999999999999999999999999999976543
Q ss_pred CCCCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhH
Q 011005 361 DSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKV 440 (496)
Q Consensus 361 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 440 (496)
. ......|++.|+|||.+.+..++.++||||+|+++|+|++|+.||.... ...............+..
T Consensus 167 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-------~~~~~~~~~~~~~~~~~~--- 234 (284)
T 2vgo_A 167 L--RRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPS-------HTETHRRIVNVDLKFPPF--- 234 (284)
T ss_dssp S--CBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSS-------HHHHHHHHHTTCCCCCTT---
T ss_pred c--ccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCC-------HhHHHHHHhccccCCCCc---
Confidence 2 2334578999999999999999999999999999999999999996321 111222222222211110
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCCCCCccccc
Q 011005 441 IRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTPLVKHAAIQ 487 (496)
Q Consensus 441 ~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~~~~~~~~~ 487 (496)
....+.+++.+||+.||++|||++|+++|+|+........++..+
T Consensus 235 --~~~~~~~li~~~l~~~p~~Rps~~~ll~h~~~~~~~~~~~p~~~~ 279 (284)
T 2vgo_A 235 --LSDGSKDLISKLLRYHPPQRLPLKGVMEHPWVKANSRRVLPPVYQ 279 (284)
T ss_dssp --SCHHHHHHHHHHSCSSGGGSCCHHHHHTCHHHHHHCCCCCCCCC-
T ss_pred --CCHHHHHHHHHHhhcCHhhCCCHHHHhhCHHHHhhccccCCCccc
Confidence 112467899999999999999999999999998876655544433
No 101
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=1.3e-43 Score=349.54 Aligned_cols=265 Identities=25% Similarity=0.377 Sum_probs=213.3
Q ss_pred HHHHHHHHhCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccch-------hHHHHHHHHHHHHHHHhh-cccccccc
Q 011005 197 YEDLIEATEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSE-------ELAFIKSFKNEAQVLSQV-LHRNIVKL 267 (496)
Q Consensus 197 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-------~~~~~~~~~~e~~~l~~l-~h~niv~~ 267 (496)
.+......++|.+.+.||+|+||.||+|.++ +|+.||||++.... .....+.+.+|+.+++++ +||||+++
T Consensus 86 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~ 165 (365)
T 2y7j_A 86 WAAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITL 165 (365)
T ss_dssp HHHHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCE
T ss_pred chhhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEE
Confidence 3444556788999999999999999999875 79999999986532 122345678999999999 79999999
Q ss_pred cceeecCCeEEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCe
Q 011005 268 YGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEA 347 (496)
Q Consensus 268 ~~~~~~~~~~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~ 347 (496)
++++......++||||+++++|.+++.... .+++..+..++.||+.||.||| +.|++||||||+||+++.++.+
T Consensus 166 ~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~---~l~~~~~~~i~~qi~~~L~~LH---~~gi~H~Dlkp~NIl~~~~~~i 239 (365)
T 2y7j_A 166 IDSYESSSFMFLVFDLMRKGELFDYLTEKV---ALSEKETRSIMRSLLEAVSFLH---ANNIVHRDLKPENILLDDNMQI 239 (365)
T ss_dssp EEEEEBSSEEEEEECCCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCE
T ss_pred EEEEeeCCEEEEEEEeCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCE
Confidence 999999999999999999999999987543 6899999999999999999999 6799999999999999999999
Q ss_pred EEccccccccccCCCCCcccccccccccccccccc------CCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCc
Q 011005 348 FVADFGTARLLHADSSNRTLLAGTYGYIAPELAYT------MVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPK 421 (496)
Q Consensus 348 kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~ 421 (496)
+|+|||++....... ......||+.|+|||++.+ ..++.++||||||+++|+|++|+.||.... ..
T Consensus 240 kl~DfG~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~-------~~ 311 (365)
T 2y7j_A 240 RLSDFGFSCHLEPGE-KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRR-------QI 311 (365)
T ss_dssp EECCCTTCEECCTTC-CBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSS-------HH
T ss_pred EEEecCcccccCCCc-ccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCC-------HH
Confidence 999999998765432 3345679999999999864 358889999999999999999999986321 11
Q ss_pred chhHhhhcCCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhc
Q 011005 422 IMLIDVLDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITR 476 (496)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~ 476 (496)
.....+......... .........+.+++.+||+.||++|||+.|+++|+|+.+
T Consensus 312 ~~~~~i~~~~~~~~~-~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~f~r 365 (365)
T 2y7j_A 312 LMLRMIMEGQYQFSS-PEWDDRSSTVKDLISRLLQVDPEARLTAEQALQHPFFER 365 (365)
T ss_dssp HHHHHHHHTCCCCCH-HHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGCC
T ss_pred HHHHHHHhCCCCCCC-cccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCcccCC
Confidence 122222222222111 111112234779999999999999999999999999853
No 102
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=3.8e-44 Score=354.20 Aligned_cols=258 Identities=26% Similarity=0.404 Sum_probs=198.4
Q ss_pred HhCCCCcceeeecCCeeEEEEEeC----CCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEE
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLP----NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFL 279 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 279 (496)
.++|++.+.||+|+||.||+|.++ ++..||||.++........+.+.+|+.++++++||||+++++++...+..++
T Consensus 44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 123 (373)
T 2qol_A 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI 123 (373)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEE
Confidence 357999999999999999999764 5778999999876544556789999999999999999999999999999999
Q ss_pred EEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEcccccccccc
Q 011005 280 IYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLH 359 (496)
Q Consensus 280 V~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 359 (496)
||||+++|+|.+++.... ..+++..++.++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++...
T Consensus 124 v~e~~~~~sL~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 198 (373)
T 2qol_A 124 VTEYMENGSLDSFLRKHD--AQFTVIQLVGMLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLGRVLE 198 (373)
T ss_dssp EEECCTTCBHHHHHHTTT--TCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCC-------
T ss_pred EEeCCCCCcHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCcceEEEcCCCCEEECcCccccccc
Confidence 999999999999998643 36899999999999999999999 6799999999999999999999999999998765
Q ss_pred CCCCCc---cccccccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccCCCCCCcchhHhhhcCCCCCC
Q 011005 360 ADSSNR---TLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSSDPKIMLIDVLDQRLPPP 435 (496)
Q Consensus 360 ~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (496)
...... ....+++.|+|||++.+..++.++||||||+++|||++ |+.||.... . ......+......+
T Consensus 199 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~-------~-~~~~~~i~~~~~~~ 270 (373)
T 2qol_A 199 DDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMS-------N-QDVIKAVDEGYRLP 270 (373)
T ss_dssp ---------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCC-------H-HHHHHHHHTTEECC
T ss_pred cCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCC-------H-HHHHHHHHcCCCCC
Confidence 432211 12235678999999999999999999999999999998 999986321 1 11222222221111
Q ss_pred CChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhcc
Q 011005 436 VDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRK 477 (496)
Q Consensus 436 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~ 477 (496)
... .....+.+++.+||+.||++||++.|+++.+.....
T Consensus 271 ~~~---~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~ 309 (373)
T 2qol_A 271 PPM---DCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIR 309 (373)
T ss_dssp CCT---TCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCc---cccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHh
Confidence 111 112347789999999999999999999998876543
No 103
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=2.5e-44 Score=354.50 Aligned_cols=255 Identities=24% Similarity=0.327 Sum_probs=202.5
Q ss_pred HhCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccch--hHHHHHHHHHHHHH-HHhhcccccccccceeecCCeEEE
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSE--ELAFIKSFKNEAQV-LSQVLHRNIVKLYGYCLHKKCMFL 279 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~-l~~l~h~niv~~~~~~~~~~~~~l 279 (496)
.++|++.+.||+|+||.||+|..+ +++.||+|++.... .......+.+|..+ ++.++||||+++++++...+..++
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~l 116 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYF 116 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEE
Confidence 367999999999999999999775 58899999997653 22233456667766 466799999999999999999999
Q ss_pred EEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEcccccccccc
Q 011005 280 IYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLH 359 (496)
Q Consensus 280 V~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 359 (496)
||||++||+|.+++.... .+++..++.++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+++...
T Consensus 117 v~E~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~ikL~DFG~a~~~~ 190 (373)
T 2r5t_A 117 VLDYINGGELFYHLQRER---CFLEPRARFYAAEIASALGYLH---SLNIVYRDLKPENILLDSQGHIVLTDFGLCKENI 190 (373)
T ss_dssp EEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCCBCGGGB
T ss_pred EEeCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEECCCCCEEEeeCccccccc
Confidence 999999999999997643 6889999999999999999999 7799999999999999999999999999998755
Q ss_pred CCCCCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChh
Q 011005 360 ADSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRK 439 (496)
Q Consensus 360 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 439 (496)
.........+||+.|+|||++.+..++.++|||||||++|||++|+.||.... .......+.......+..
T Consensus 191 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~-------~~~~~~~i~~~~~~~~~~-- 261 (373)
T 2r5t_A 191 EHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRN-------TAEMYDNILNKPLQLKPN-- 261 (373)
T ss_dssp CCCCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSB-------HHHHHHHHHHSCCCCCSS--
T ss_pred cCCCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCC-------HHHHHHHHHhcccCCCCC--
Confidence 44445556789999999999999999999999999999999999999996321 222333333333322211
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCCH----HHHHHHHHHhc
Q 011005 440 VIRDILLISTVSFACLQSNPKSRPTM----QSVSQEFLITR 476 (496)
Q Consensus 440 ~~~~~~~l~~li~~cl~~dP~~Rps~----~evl~~~~~~~ 476 (496)
....+.+++.+||+.||++||++ .|+++|+|+..
T Consensus 262 ---~~~~~~~li~~lL~~dp~~R~~~~~~~~~i~~h~~f~~ 299 (373)
T 2r5t_A 262 ---ITNSARHLLEGLLQKDRTKRLGAKDDFMEIKSHVFFSL 299 (373)
T ss_dssp ---SCHHHHHHHHHHTCSSGGGSTTTTTTHHHHHTSGGGTT
T ss_pred ---CCHHHHHHHHHHcccCHHhCCCCCCCHHHHhCCccccC
Confidence 11246789999999999999987 68888888753
No 104
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=8e-44 Score=364.81 Aligned_cols=262 Identities=23% Similarity=0.326 Sum_probs=211.7
Q ss_pred HHhCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccch-hHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEE
Q 011005 203 ATEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSE-ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLI 280 (496)
Q Consensus 203 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV 280 (496)
..++|++.+.||+|+||+||+|..+ +++.||||++.... .......+.+|++++++++||||+++++++......++|
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 99 (486)
T 3mwu_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV 99 (486)
T ss_dssp HHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEE
Confidence 4578999999999999999999765 78999999986532 122346788999999999999999999999999999999
Q ss_pred EEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEec---CCCCeEEcccccccc
Q 011005 281 YEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLN---SKLEAFVADFGTARL 357 (496)
Q Consensus 281 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~---~~~~~kl~Dfg~~~~ 357 (496)
|||+++|+|.+.+.... .+++..+..++.||+.||.||| +.+|+||||||+||+++ .++.+||+|||+++.
T Consensus 100 ~e~~~~~~L~~~~~~~~---~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~ 173 (486)
T 3mwu_A 100 GELYTGGELFDEIIKRK---RFSEHDAARIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTC 173 (486)
T ss_dssp ECCCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTT
T ss_pred EEcCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCchHHEEEecCCCCCCEEEEECCcCeE
Confidence 99999999999887643 6899999999999999999999 77999999999999995 456799999999987
Q ss_pred ccCCCCCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCC
Q 011005 358 LHADSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVD 437 (496)
Q Consensus 358 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (496)
..... .....+||+.|+|||++.+ .++.++||||+||++|+|++|+.||.... .......+..........
T Consensus 174 ~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~-------~~~~~~~i~~~~~~~~~~ 244 (486)
T 3mwu_A 174 FQQNT-KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKN-------EYDILKRVETGKYAFDLP 244 (486)
T ss_dssp BCCC-----CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSS-------HHHHHHHHHHTCCCSCSG
T ss_pred CCCCC-ccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCC-------HHHHHHHHHhCCCCCCCc
Confidence 64432 2344679999999999876 58999999999999999999999996321 222223333333322211
Q ss_pred hhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCCC
Q 011005 438 RKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTPL 480 (496)
Q Consensus 438 ~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~~ 480 (496)
. +......+.+++.+||+.||++|||+.|+++|+|+......
T Consensus 245 ~-~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~hp~~~~~~~~ 286 (486)
T 3mwu_A 245 Q-WRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKYSSE 286 (486)
T ss_dssp G-GGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHCHHHHHTCCC
T ss_pred c-cCCCCHHHHHHHHHHcCCChhhCcCHHHHhcCHhhccCccc
Confidence 1 11223357799999999999999999999999999876544
No 105
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.6e-43 Score=351.34 Aligned_cols=261 Identities=23% Similarity=0.355 Sum_probs=211.9
Q ss_pred HhCCCCcceeeecCCeeEEEEEeC--------CCcEEEEEEcccchhHHHHHHHHHHHHHHHhh-cccccccccceeecC
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLP--------NGKVFALKKLHTSEELAFIKSFKNEAQVLSQV-LHRNIVKLYGYCLHK 274 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~ 274 (496)
.++|.+.+.||+|+||+||+|.+. .+..||+|++.........+.+.+|+++++++ +||||+++++++..+
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 147 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 147 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccC
Confidence 467899999999999999999752 34679999998765555667889999999999 899999999999999
Q ss_pred CeEEEEEEecCCCChhhhhhCCCC-------------CccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEe
Q 011005 275 KCMFLIYEYMERGSLFCNLHNNED-------------AVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILL 341 (496)
Q Consensus 275 ~~~~lV~e~~~~g~L~~~l~~~~~-------------~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~ 341 (496)
+..++||||+++|+|.+++..... ...+++..++.++.||+.||+||| +.+|+||||||+|||+
T Consensus 148 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll 224 (382)
T 3tt0_A 148 GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLA---SKKCIHRDLAARNVLV 224 (382)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEE
T ss_pred CceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCcceEEE
Confidence 999999999999999999976532 235899999999999999999999 6799999999999999
Q ss_pred cCCCCeEEccccccccccCCCC--CccccccccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccCCCC
Q 011005 342 NSKLEAFVADFGTARLLHADSS--NRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSS 418 (496)
Q Consensus 342 ~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~ 418 (496)
+.++.+||+|||+++....... ......+|+.|+|||++.+..++.++||||||+++|+|++ |..||....
T Consensus 225 ~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~------ 298 (382)
T 3tt0_A 225 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP------ 298 (382)
T ss_dssp CTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC------
T ss_pred cCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCC------
Confidence 9999999999999987654322 2233457889999999999999999999999999999999 999986321
Q ss_pred CCcchhHhhhcCCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccC
Q 011005 419 DPKIMLIDVLDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKT 478 (496)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~ 478 (496)
.. .....+........... ....+.+++.+||+.||++|||++|+++++......
T Consensus 299 -~~-~~~~~~~~~~~~~~~~~---~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~ 353 (382)
T 3tt0_A 299 -VE-ELFKLLKEGHRMDKPSN---CTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVAL 353 (382)
T ss_dssp -HH-HHHHHHHTTCCCCCCSS---CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred -HH-HHHHHHHcCCCCCCCcc---CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 11 12222222211111111 122477899999999999999999999998776543
No 106
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=1.3e-43 Score=363.42 Aligned_cols=261 Identities=25% Similarity=0.315 Sum_probs=214.0
Q ss_pred hCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchh--HHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEE
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEE--LAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIY 281 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~ 281 (496)
++|.+.+.||+|+||.||+|.++ +|+.||+|++..... ......+.+|+.++++++||||+++++++......++||
T Consensus 185 ~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVm 264 (543)
T 3c4z_A 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVM 264 (543)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEE
Confidence 67889999999999999999875 699999999976432 223467889999999999999999999999999999999
Q ss_pred EecCCCChhhhhhCCCC-CccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccC
Q 011005 282 EYMERGSLFCNLHNNED-AVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHA 360 (496)
Q Consensus 282 e~~~~g~L~~~l~~~~~-~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 360 (496)
||++||+|.+++..... ...+++..++.++.||+.||.||| +.+|+||||||+|||++.++.+||+|||+++....
T Consensus 265 E~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH---~~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~ 341 (543)
T 3c4z_A 265 TIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKA 341 (543)
T ss_dssp CCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHH---HcCCcccCCChHHEEEeCCCCEEEeecceeeeccC
Confidence 99999999999876432 336899999999999999999999 77999999999999999999999999999988755
Q ss_pred CCCCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhH
Q 011005 361 DSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKV 440 (496)
Q Consensus 361 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 440 (496)
........+||+.|+|||++.+..++.++||||+||++|||++|+.||..... ..........+.......+..
T Consensus 342 ~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~---~~~~~~~~~~i~~~~~~~p~~--- 415 (543)
T 3c4z_A 342 GQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGE---KVENKELKQRVLEQAVTYPDK--- 415 (543)
T ss_dssp TCCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTC---CCCHHHHHHHHHHCCCCCCTT---
T ss_pred CCcccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCcc---chhHHHHHHHHhhcccCCCcc---
Confidence 44444456899999999999999999999999999999999999999974321 111122222233332222211
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCC-----HHHHHHHHHHhc
Q 011005 441 IRDILLISTVSFACLQSNPKSRPT-----MQSVSQEFLITR 476 (496)
Q Consensus 441 ~~~~~~l~~li~~cl~~dP~~Rps-----~~evl~~~~~~~ 476 (496)
....+.+++.+||+.||++||+ ++++++|+|+..
T Consensus 416 --~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~Hpff~~ 454 (543)
T 3c4z_A 416 --FSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRD 454 (543)
T ss_dssp --SCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHTSGGGTT
T ss_pred --cCHHHHHHHHHhccCCHhHCCCCcccCHHHHHcCccccC
Confidence 1224678999999999999996 489999999875
No 107
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=1.5e-43 Score=345.44 Aligned_cols=258 Identities=23% Similarity=0.364 Sum_probs=214.3
Q ss_pred HhCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccch--hHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEE
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLI 280 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV 280 (496)
.++|.+.+.||+|+||.||+|.+. +++.||+|.+.... .....+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 119 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 119 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence 467999999999999999999765 57899999987542 234456788999999999999999999999999999999
Q ss_pred EEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccC
Q 011005 281 YEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHA 360 (496)
Q Consensus 281 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 360 (496)
|||+++++|.+++.... .+++..++.++.||+.||.||| +.+|+||||||+||+++.++.+||+|||++.....
T Consensus 120 ~e~~~~~~L~~~~~~~~---~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~ 193 (335)
T 2owb_A 120 LELCRRRSLLELHKRRK---ALTEPEARYYLRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEY 193 (335)
T ss_dssp ECCCTTCBHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCCTTCEECCS
T ss_pred EecCCCCCHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHH---HCCCEecCCCchhEEEcCCCCEEEeeccCceeccc
Confidence 99999999999887543 6899999999999999999999 67999999999999999999999999999987765
Q ss_pred CCCCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhH
Q 011005 361 DSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKV 440 (496)
Q Consensus 361 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 440 (496)
.........||+.|+|||++.+..++.++||||||+++|+|++|+.||.... ...............+..
T Consensus 194 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-------~~~~~~~~~~~~~~~~~~--- 263 (335)
T 2owb_A 194 DGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSC-------LKETYLRIKKNEYSIPKH--- 263 (335)
T ss_dssp TTCCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSS-------HHHHHHHHHHTCCCCCTT---
T ss_pred CcccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCC-------HHHHHHHHhcCCCCCCcc---
Confidence 4444555679999999999999999999999999999999999999996321 111122222222211110
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCC
Q 011005 441 IRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTP 479 (496)
Q Consensus 441 ~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~ 479 (496)
....+.+++.+||+.||++|||++|+++|+|+.....
T Consensus 264 --~~~~~~~li~~~l~~dp~~Rps~~ell~~~~~~~~~~ 300 (335)
T 2owb_A 264 --INPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYI 300 (335)
T ss_dssp --SCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHTSCC
T ss_pred --CCHHHHHHHHHHccCChhHCcCHHHHhcCccccCCCc
Confidence 1124678999999999999999999999999987643
No 108
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=7.9e-44 Score=339.01 Aligned_cols=260 Identities=24% Similarity=0.311 Sum_probs=207.9
Q ss_pred HhCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchhH-----HHHHHHHHHHHHHHhhcccccccccceeecCCeE
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEEL-----AFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCM 277 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-----~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 277 (496)
.++|++.+.||+|+||.||+|..+ +++.||+|.+...... ...+.+.+|+.++++++||||+++++++..+...
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 83 (283)
T 3bhy_A 4 EDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDV 83 (283)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeE
Confidence 467999999999999999999776 6899999998754211 1246789999999999999999999999999999
Q ss_pred EEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCC----CeEEcccc
Q 011005 278 FLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKL----EAFVADFG 353 (496)
Q Consensus 278 ~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~----~~kl~Dfg 353 (496)
++||||+++++|.+++.... .+++..+..++.|++.||.||| +.+++||||||+||+++.++ .++|+|||
T Consensus 84 ~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg 157 (283)
T 3bhy_A 84 VLILELVSGGELFDFLAEKE---SLTEDEATQFLKQILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFG 157 (283)
T ss_dssp EEEEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSSSSCCEEECCCT
T ss_pred EEEEeecCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCChHHEEEecCCCCCCceEEEecc
Confidence 99999999999999997543 6899999999999999999999 77999999999999998877 79999999
Q ss_pred ccccccCCCCCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCC
Q 011005 354 TARLLHADSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLP 433 (496)
Q Consensus 354 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (496)
++....... ......+++.|+|||++.+..++.++||||||+++|+|++|+.||.... ..............
T Consensus 158 ~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-------~~~~~~~~~~~~~~ 229 (283)
T 3bhy_A 158 IAHKIEAGN-EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGET-------KQETLTNISAVNYD 229 (283)
T ss_dssp TCEECC---------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSS-------HHHHHHHHHTTCCC
T ss_pred cceeccCCC-cccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcc-------hHHHHHHhHhcccC
Confidence 998764332 2334568999999999999999999999999999999999999986321 11111222111111
Q ss_pred CCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccC
Q 011005 434 PPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKT 478 (496)
Q Consensus 434 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~ 478 (496)
. ...........+.+++.+||+.||++|||+.|+++|+|+....
T Consensus 230 ~-~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~ 273 (283)
T 3bhy_A 230 F-DEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIR 273 (283)
T ss_dssp C-CHHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHHH
T ss_pred C-cchhcccCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHHH
Confidence 1 1111112233578999999999999999999999999987653
No 109
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=5.8e-44 Score=344.27 Aligned_cols=263 Identities=26% Similarity=0.328 Sum_probs=200.9
Q ss_pred HHhCCCCcceeeecCCeeEEEEEe-CCCcEEEEEEcccchh----HHHHHHHHHHHHHHHhhc---ccccccccceeecC
Q 011005 203 ATEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSEE----LAFIKSFKNEAQVLSQVL---HRNIVKLYGYCLHK 274 (496)
Q Consensus 203 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~----~~~~~~~~~e~~~l~~l~---h~niv~~~~~~~~~ 274 (496)
..++|++.+.||+|+||+||+|.+ .+++.||+|++..... ......+.+|+.++++++ ||||+++++++...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 467899999999999999999986 4789999999864321 111235667888877775 99999999999775
Q ss_pred C-----eEEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEE
Q 011005 275 K-----CMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFV 349 (496)
Q Consensus 275 ~-----~~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl 349 (496)
. ..++||||+. |+|.+++..... ..+++..++.++.||+.||+||| +.+|+||||||+||+++.++.+||
T Consensus 87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~~-~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~Nil~~~~~~~kl 161 (308)
T 3g33_A 87 RTDREIKVTLVFEHVD-QDLRTYLDKAPP-PGLPAETIKDLMRQFLRGLDFLH---ANCIVHRDLKPENILVTSGGTVKL 161 (308)
T ss_dssp CSSSEEEEEEEEECCC-CBHHHHHHTCCT-TCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCTTTEEECTTSCEEE
T ss_pred CCCCceeEEEEehhhh-cCHHHHHhhccC-CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEcCCCCEEE
Confidence 4 5899999997 599999987543 24899999999999999999999 679999999999999999999999
Q ss_pred ccccccccccCCCCCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhc
Q 011005 350 ADFGTARLLHADSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLD 429 (496)
Q Consensus 350 ~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 429 (496)
+|||+++...... ......||+.|+|||++.+..++.++||||+|+++|+|++|+.||...... .....+..
T Consensus 162 ~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~-------~~~~~i~~ 233 (308)
T 3g33_A 162 ADFGLARIYSYQM-ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEA-------DQLGKIFD 233 (308)
T ss_dssp CSCSCTTTSTTCC-CSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHH-------HHHHHHHH
T ss_pred eeCccccccCCCc-ccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHH-------HHHHHHHH
Confidence 9999998764332 334567899999999999999999999999999999999999999632210 00000000
Q ss_pred ----------------------CCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccC
Q 011005 430 ----------------------QRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKT 478 (496)
Q Consensus 430 ----------------------~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~ 478 (496)
...+.+...........+.+++.+||+.||++|||+.|+++|+|+.+..
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h~~~~~~~ 304 (308)
T 3g33_A 234 LIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKDE 304 (308)
T ss_dssp HHCCCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSTTC----
T ss_pred HhCCCChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcCccccCCC
Confidence 0000000000001123577899999999999999999999999998653
No 110
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=9.6e-44 Score=348.09 Aligned_cols=261 Identities=25% Similarity=0.391 Sum_probs=211.8
Q ss_pred HHhCCCCcceeeecCCeeEEEEEeC------CCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCe
Q 011005 203 ATEDFDIRYCIGTGGYGSVYKAQLP------NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKC 276 (496)
Q Consensus 203 ~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 276 (496)
..++|++.+.||+|+||.||+|.+. +++.||+|.++........+.+.+|+.++++++||||+++++++...+.
T Consensus 45 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 124 (343)
T 1luf_A 45 PRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKP 124 (343)
T ss_dssp CGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSS
T ss_pred cHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCCc
Confidence 3578999999999999999999764 3488999999876555556789999999999999999999999999999
Q ss_pred EEEEEEecCCCChhhhhhCCCC---------------------CccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCC
Q 011005 277 MFLIYEYMERGSLFCNLHNNED---------------------AVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDIS 335 (496)
Q Consensus 277 ~~lV~e~~~~g~L~~~l~~~~~---------------------~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlk 335 (496)
.++||||+++|+|.+++..... ...+++.+++.++.||+.||.||| +.+|+|||||
T Consensus 125 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlk 201 (343)
T 1luf_A 125 MCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLS---ERKFVHRDLA 201 (343)
T ss_dssp CEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCS
T ss_pred eEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCC
Confidence 9999999999999999976421 146899999999999999999999 7799999999
Q ss_pred CCceEecCCCCeEEccccccccccCCC--CCccccccccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCcccc
Q 011005 336 SNNILLNSKLEAFVADFGTARLLHADS--SNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILS 412 (496)
Q Consensus 336 p~Nil~~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~ 412 (496)
|+||+++.++.+||+|||+++...... .......+|+.|+|||++.+..++.++||||||+++|+|++ |+.||....
T Consensus 202 p~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~ 281 (343)
T 1luf_A 202 TRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMA 281 (343)
T ss_dssp GGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSC
T ss_pred cceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCC
Confidence 999999999999999999998764332 12233567889999999999999999999999999999999 999986321
Q ss_pred ccCCCCCCcchhHhhhcCCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhcc
Q 011005 413 SLSSSSDPKIMLIDVLDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRK 477 (496)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~ 477 (496)
................... ....+.+++.+||+.||++|||+.|+++++.....
T Consensus 282 -------~~~~~~~~~~~~~~~~~~~----~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~ 335 (343)
T 1luf_A 282 -------HEEVIYYVRDGNILACPEN----CPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCE 335 (343)
T ss_dssp -------HHHHHHHHHTTCCCCCCTT----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred -------hHHHHHHHhCCCcCCCCCC----CCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHh
Confidence 1222222222222211111 12247789999999999999999999999877554
No 111
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=1.1e-43 Score=341.62 Aligned_cols=262 Identities=23% Similarity=0.329 Sum_probs=210.8
Q ss_pred HHhCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEE
Q 011005 203 ATEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIY 281 (496)
Q Consensus 203 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~ 281 (496)
..++|.+.+.||+|+||.||+|... +|+.||+|.+...... ....+.+|+.++++++||||+++++++......++||
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 85 (304)
T 2jam_A 7 IRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAF-RDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVM 85 (304)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC-------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhccceeeeeccCCCCceEEEEEECCCCCEEEEEEEeccccc-chHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEE
Confidence 4578999999999999999999765 7899999999765422 2356889999999999999999999999999999999
Q ss_pred EecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEe---cCCCCeEEccccccccc
Q 011005 282 EYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILL---NSKLEAFVADFGTARLL 358 (496)
Q Consensus 282 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~---~~~~~~kl~Dfg~~~~~ 358 (496)
||+++++|.+++.... .+++..+..++.|++.||.||| +.+++||||||+||++ +.++.++|+|||++...
T Consensus 86 e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~ 159 (304)
T 2jam_A 86 QLVSGGELFDRILERG---VYTEKDASLVIQQVLSAVKYLH---ENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKME 159 (304)
T ss_dssp CCCCSCBHHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCC
T ss_pred EcCCCccHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEecCCCCCCEEEccCCcceec
Confidence 9999999999887543 6899999999999999999999 6799999999999999 78899999999999754
Q ss_pred cCCCCCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCCh
Q 011005 359 HADSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDR 438 (496)
Q Consensus 359 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (496)
... ......||+.|+|||.+.+..++.++||||+|+++|+|++|+.||.... .......+.......+..
T Consensus 160 ~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-------~~~~~~~i~~~~~~~~~~- 229 (304)
T 2jam_A 160 QNG--IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEET-------ESKLFEKIKEGYYEFESP- 229 (304)
T ss_dssp CCB--TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSC-------HHHHHHHHHHCCCCCCTT-
T ss_pred CCC--ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCC-------HHHHHHHHHcCCCCCCcc-
Confidence 322 2334568999999999999999999999999999999999999986321 111222222222211110
Q ss_pred hHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCCCC
Q 011005 439 KVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTPLV 481 (496)
Q Consensus 439 ~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~~~ 481 (496)
........+.+++.+||+.||++|||++|+++|+|+....+..
T Consensus 230 ~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~~~ 272 (304)
T 2jam_A 230 FWDDISESAKDFICHLLEKDPNERYTCEKALSHPWIDGNTALH 272 (304)
T ss_dssp TTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHHHHSSCSCC
T ss_pred ccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCccccCCCccc
Confidence 0011123577999999999999999999999999998876543
No 112
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=3e-44 Score=357.63 Aligned_cols=261 Identities=25% Similarity=0.318 Sum_probs=194.8
Q ss_pred HHHhCCCCcceeeecCCeeEEEEEe-CCCcEEEEEEcccch-hHHHHHHHHHHHHHHHhhc-ccccccccceeecCC--e
Q 011005 202 EATEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSE-ELAFIKSFKNEAQVLSQVL-HRNIVKLYGYCLHKK--C 276 (496)
Q Consensus 202 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~--~ 276 (496)
...++|++.+.||+|+||.||+|.+ .+|+.||||++.... .....+.+.+|+.+++++. ||||+++++++...+ .
T Consensus 6 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~ 85 (388)
T 3oz6_A 6 HVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRD 85 (388)
T ss_dssp HHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSC
T ss_pred cccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCE
Confidence 3567899999999999999999975 478999999986532 2334567789999999997 999999999997544 7
Q ss_pred EEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccc
Q 011005 277 MFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTAR 356 (496)
Q Consensus 277 ~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~ 356 (496)
.++||||++ |+|..++... .++...+..++.||+.||+||| +.||+||||||+|||++.++.+||+|||+++
T Consensus 86 ~~lv~e~~~-~~L~~~~~~~----~~~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~ 157 (388)
T 3oz6_A 86 VYLVFDYME-TDLHAVIRAN----ILEPVHKQYVVYQLIKVIKYLH---SGGLLHRDMKPSNILLNAECHVKVADFGLSR 157 (388)
T ss_dssp EEEEEECCS-EEHHHHHHHT----CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred EEEEecccC-cCHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCCCHHHeEEcCCCCEEecCCcccc
Confidence 899999997 5898888753 6889999999999999999999 7799999999999999999999999999998
Q ss_pred cccCC---------------------CCCcccccccccccccccccc-CCcCcccchhhHHHHHHHHHhCCCCCcccccc
Q 011005 357 LLHAD---------------------SSNRTLLAGTYGYIAPELAYT-MVMTEKCDVYSFGVVTLEVLMGKHPRDILSSL 414 (496)
Q Consensus 357 ~~~~~---------------------~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~el~~g~~p~~~~~~~ 414 (496)
..... .......+||+.|+|||++.+ ..++.++||||+||++|||++|+.||......
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~ 237 (388)
T 3oz6_A 158 SFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTM 237 (388)
T ss_dssp ESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH
T ss_pred cccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 65321 111233579999999999987 67899999999999999999999999643211
Q ss_pred CCCCCCcchhHhhhcC-------------------------------CC-CCCCChhHH----------HHHHHHHHHHH
Q 011005 415 SSSSDPKIMLIDVLDQ-------------------------------RL-PPPVDRKVI----------RDILLISTVSF 452 (496)
Q Consensus 415 ~~~~~~~~~~~~~~~~-------------------------------~~-~~~~~~~~~----------~~~~~l~~li~ 452 (496)
.....+... .. ......... .....+.+|+.
T Consensus 238 -------~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~ 310 (388)
T 3oz6_A 238 -------NQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLD 310 (388)
T ss_dssp -------HHHHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHH
T ss_pred -------HHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHH
Confidence 000000000 00 000000000 01234779999
Q ss_pred hcccCCCCCCCCHHHHHHHHHHhcc
Q 011005 453 ACLQSNPKSRPTMQSVSQEFLITRK 477 (496)
Q Consensus 453 ~cl~~dP~~Rps~~evl~~~~~~~~ 477 (496)
+||+.||++|||++|+++|+|+..-
T Consensus 311 ~~L~~dP~~R~t~~e~l~Hp~~~~~ 335 (388)
T 3oz6_A 311 KLLQFNPNKRISANDALKHPFVSIF 335 (388)
T ss_dssp HHCCSSGGGSCCHHHHTTSTTTTTT
T ss_pred HhhccCcccCCCHHHHhCCHHHHHh
Confidence 9999999999999999999998653
No 113
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=1.5e-43 Score=342.20 Aligned_cols=258 Identities=24% Similarity=0.406 Sum_probs=209.8
Q ss_pred HhCCCCcceeeecCCeeEEEEEe------CCCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeE
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQL------PNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCM 277 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 277 (496)
.++|.+.+.||+|+||.||+|.+ .+++.||+|.+.........+.+.+|+.++++++||||+++++++...+..
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 101 (314)
T 2ivs_A 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPL 101 (314)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSC
T ss_pred hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCce
Confidence 46789999999999999999975 345889999998765555667889999999999999999999999999999
Q ss_pred EEEEEecCCCChhhhhhCCCC---------------------CccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCC
Q 011005 278 FLIYEYMERGSLFCNLHNNED---------------------AVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISS 336 (496)
Q Consensus 278 ~lV~e~~~~g~L~~~l~~~~~---------------------~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp 336 (496)
++||||+++|+|.+++..... ...+++..++.++.||+.||.||| +.+++||||||
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dikp 178 (314)
T 2ivs_A 102 LLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLA---EMKLVHRDLAA 178 (314)
T ss_dssp EEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHH---HTTEECCCCSG
T ss_pred EEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHH---HCCCcccccch
Confidence 999999999999999986532 124899999999999999999999 67999999999
Q ss_pred CceEecCCCCeEEccccccccccCCCCC--ccccccccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccc
Q 011005 337 NNILLNSKLEAFVADFGTARLLHADSSN--RTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSS 413 (496)
Q Consensus 337 ~Nil~~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~ 413 (496)
+||+++.++.+||+|||+++........ .....+++.|+|||.+.+..++.++||||+|+++|+|++ |+.||....
T Consensus 179 ~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~- 257 (314)
T 2ivs_A 179 RNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIP- 257 (314)
T ss_dssp GGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCC-
T ss_pred heEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCC-
Confidence 9999999999999999999876443322 223456788999999999999999999999999999999 999986322
Q ss_pred cCCCCCCcchhHhhhcCCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHh
Q 011005 414 LSSSSDPKIMLIDVLDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLIT 475 (496)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~ 475 (496)
... ....+.......... .....+.+++.+||+.||++|||+.|+++++...
T Consensus 258 ------~~~-~~~~~~~~~~~~~~~---~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~ 309 (314)
T 2ivs_A 258 ------PER-LFNLLKTGHRMERPD---NCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKM 309 (314)
T ss_dssp ------GGG-HHHHHHTTCCCCCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred ------HHH-HHHHhhcCCcCCCCc---cCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 111 222222211111111 1123477899999999999999999999998654
No 114
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=1.6e-44 Score=351.35 Aligned_cols=261 Identities=22% Similarity=0.276 Sum_probs=197.8
Q ss_pred HHhCCCCcceeeecCCeeEEEEEe-CCCcEEEEEEcccchh-HHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEE
Q 011005 203 ATEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSEE-LAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLI 280 (496)
Q Consensus 203 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV 280 (496)
..++|++.+.||+|+||+||+|.+ .+++.||+|++..... ....+.+.+|+.++++++||||+++++++..+...++|
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 111 (329)
T 3gbz_A 32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLI 111 (329)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEE
T ss_pred chhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEE
Confidence 457899999999999999999975 4789999999976432 23345678999999999999999999999999999999
Q ss_pred EEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEec-----CCCCeEEcccccc
Q 011005 281 YEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLN-----SKLEAFVADFGTA 355 (496)
Q Consensus 281 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~-----~~~~~kl~Dfg~~ 355 (496)
|||+++ +|.+++.... .+++..++.++.||+.||+||| +.+|+||||||+|||++ ..+.+||+|||++
T Consensus 112 ~e~~~~-~L~~~~~~~~---~~~~~~~~~i~~ql~~~l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a 184 (329)
T 3gbz_A 112 FEYAEN-DLKKYMDKNP---DVSMRVIKSFLYQLINGVNFCH---SRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLA 184 (329)
T ss_dssp EECCSE-EHHHHHHHCT---TCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEC-----CCEEEECCTTHH
T ss_pred EecCCC-CHHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHH---hCCEECCCCCHHHEEEecCCCCccceEEECcCCCc
Confidence 999985 9999988654 5899999999999999999999 67999999999999994 4556999999999
Q ss_pred ccccCCCCCccccccccccccccccccC-CcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhh------
Q 011005 356 RLLHADSSNRTLLAGTYGYIAPELAYTM-VMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVL------ 428 (496)
Q Consensus 356 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~------ 428 (496)
+.............+|+.|+|||++.+. .++.++||||+|+++|+|++|+.||...... .......
T Consensus 185 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-------~~~~~~~~~~~~~ 257 (329)
T 3gbz_A 185 RAFGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEI-------DQLFKIFEVLGLP 257 (329)
T ss_dssp HHHC-----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-------HHHHHHHHHHCCC
T ss_pred cccCCcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHH-------HHHHHHHHHhCCC
Confidence 8876544445556789999999999875 4899999999999999999999999633210 0000000
Q ss_pred --------------cCCCCCCCChhHH-----HHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhcc
Q 011005 429 --------------DQRLPPPVDRKVI-----RDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRK 477 (496)
Q Consensus 429 --------------~~~~~~~~~~~~~-----~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~ 477 (496)
....+........ .....+.+|+.+||+.||++|||++|+++|+|+...
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~ 325 (329)
T 3gbz_A 258 DDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPYFSHN 325 (329)
T ss_dssp CTTTSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSS
T ss_pred chhhhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCCcccCCC
Confidence 0000000000000 012357799999999999999999999999999754
No 115
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=5.6e-44 Score=366.01 Aligned_cols=261 Identities=24% Similarity=0.341 Sum_probs=214.1
Q ss_pred HHhCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccch--hHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEE
Q 011005 203 ATEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFL 279 (496)
Q Consensus 203 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 279 (496)
..++|.+.+.||+|+||.||+|..+ +++.||||++.... .......+.+|+.++++++||||+++++++......++
T Consensus 24 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 103 (484)
T 3nyv_A 24 FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYL 103 (484)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ccCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 3568999999999999999999765 78999999986532 12234678999999999999999999999999999999
Q ss_pred EEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEe---cCCCCeEEccccccc
Q 011005 280 IYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILL---NSKLEAFVADFGTAR 356 (496)
Q Consensus 280 V~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~---~~~~~~kl~Dfg~~~ 356 (496)
||||+.+|+|.+.+.... .+++..+..++.||+.||.||| +.+|+||||||+||++ +.++.+||+|||+++
T Consensus 104 v~e~~~~~~L~~~~~~~~---~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~ 177 (484)
T 3nyv_A 104 VGEVYTGGELFDEIISRK---RFSEVDAARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLST 177 (484)
T ss_dssp EECCCCSCBHHHHHHTCS---CCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHH
T ss_pred EEecCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeE
Confidence 999999999999987654 6899999999999999999999 7799999999999999 567899999999998
Q ss_pred cccCCCCCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCC
Q 011005 357 LLHADSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPV 436 (496)
Q Consensus 357 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (496)
...... .....+||+.|+|||++.+ .++.++||||+|+++|+|++|+.||.... .......+.......+.
T Consensus 178 ~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~-------~~~~~~~i~~~~~~~~~ 248 (484)
T 3nyv_A 178 HFEASK-KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGAN-------EYDILKKVEKGKYTFEL 248 (484)
T ss_dssp HBCCCC-SHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSS-------HHHHHHHHHHCCCCCCS
T ss_pred Eccccc-ccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCC-------HHHHHHHHHcCCCCCCC
Confidence 775432 3344679999999999876 68999999999999999999999996322 22222333333332221
Q ss_pred ChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCC
Q 011005 437 DRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTP 479 (496)
Q Consensus 437 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~ 479 (496)
.. +......+.+|+.+||+.||++|||+.|+++|+|+.....
T Consensus 249 ~~-~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h~~~~~~~~ 290 (484)
T 3nyv_A 249 PQ-WKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQTYTK 290 (484)
T ss_dssp GG-GGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSHHHHHHTC
T ss_pred cc-cccCCHHHHHHHHHHCCCChhHCcCHHHHhhChhhccccc
Confidence 11 1122335779999999999999999999999999987654
No 116
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.9e-43 Score=342.13 Aligned_cols=269 Identities=25% Similarity=0.370 Sum_probs=203.2
Q ss_pred HHHHHHhCCCCcceeeecCCeeEEEEEeCCCcEEEEEEcccchhHHHHHHHHHHHHHHHhh--cccccccccceeecC--
Q 011005 199 DLIEATEDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQV--LHRNIVKLYGYCLHK-- 274 (496)
Q Consensus 199 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l--~h~niv~~~~~~~~~-- 274 (496)
......++|++.+.||+|+||.||+|.+. ++.||||++..... ....+|.+++... +||||+++++++...
T Consensus 31 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~----~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~ 105 (337)
T 3mdy_A 31 VQRTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTEE----ASWFRETEIYQTVLMRHENILGFIAADIKGTG 105 (337)
T ss_dssp HHTTHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGGGH----HHHHHHHHHHTSTTCCCTTBCCEEEEEEESCG
T ss_pred cccccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEecccc----chhhhHHHHHHHHhhcCCCeeeEEEEEccCCC
Confidence 33445688999999999999999999885 89999999865442 3345566666555 899999999999877
Q ss_pred --CeEEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCC--------CeEEeCCCCCceEecCC
Q 011005 275 --KCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSP--------SIIHRDISSNNILLNSK 344 (496)
Q Consensus 275 --~~~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~--------~i~H~dlkp~Nil~~~~ 344 (496)
...++||||+++|+|.+++... .+++..++.++.|++.||+||| .. +|+||||||+||+++.+
T Consensus 106 ~~~~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~~i~~~l~~lH---~~~~~~~~~~~ivH~Dikp~Nill~~~ 178 (337)
T 3mdy_A 106 SWTQLYLITDYHENGSLYDYLKST----TLDAKSMLKLAYSSVSGLCHLH---TEIFSTQGKPAIAHRDLKSKNILVKKN 178 (337)
T ss_dssp GGCEEEEEECCCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHH---SCBCSTTCBCCEECSCCCGGGEEECTT
T ss_pred CCCceEEEEeccCCCcHHHHhhcc----CCCHHHHHHHHHHHHHHHHHHH---HhhhhhccCCCEEecccchHHEEECCC
Confidence 6899999999999999999754 5899999999999999999999 66 99999999999999999
Q ss_pred CCeEEccccccccccCCCCC----ccccccccccccccccccCCcCcc------cchhhHHHHHHHHHhCCCCCcccccc
Q 011005 345 LEAFVADFGTARLLHADSSN----RTLLAGTYGYIAPELAYTMVMTEK------CDVYSFGVVTLEVLMGKHPRDILSSL 414 (496)
Q Consensus 345 ~~~kl~Dfg~~~~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~------~DvwslG~il~el~~g~~p~~~~~~~ 414 (496)
+.+||+|||+++........ .....||+.|+|||++.+..++.. +||||||+++|||++|..|+......
T Consensus 179 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~ 258 (337)
T 3mdy_A 179 GTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEY 258 (337)
T ss_dssp SCEEECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCC
T ss_pred CCEEEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccc
Confidence 99999999999776443322 124579999999999988776665 99999999999999994444321111
Q ss_pred CC-------CCCCcchhHh-hhcCCCCCCCCh--hHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCC
Q 011005 415 SS-------SSDPKIMLID-VLDQRLPPPVDR--KVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTP 479 (496)
Q Consensus 415 ~~-------~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~ 479 (496)
.. .......... ............ ........+.+++.+||+.||++|||+.|+++++....+..
T Consensus 259 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~ 333 (337)
T 3mdy_A 259 QLPYHDLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQ 333 (337)
T ss_dssp CCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred cccHhhhcCCCCchhhhHHHHhhhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhhc
Confidence 00 0111111111 112222222221 11234456889999999999999999999999998765543
No 117
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=9.1e-44 Score=338.61 Aligned_cols=255 Identities=24% Similarity=0.394 Sum_probs=205.4
Q ss_pred HhCCCCcceeeecCCeeEEEEEeCCCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEe
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEY 283 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~ 283 (496)
.++|++.+.||+|+||+||+|.+.++..||+|++...... .+.+.+|++++++++||||+++++++...+..++||||
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~--~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 100 (283)
T 3gen_A 23 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS--EDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEY 100 (283)
T ss_dssp GGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSBC--HHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECC
T ss_pred HHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCCC--HHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEec
Confidence 4678999999999999999999988999999999865432 25688999999999999999999999999999999999
Q ss_pred cCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCC
Q 011005 284 MERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSS 363 (496)
Q Consensus 284 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 363 (496)
+++++|.+++.... ..+++..++.++.|++.||.||| +.+++||||||+||+++.++.++|+|||+++.......
T Consensus 101 ~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~ 175 (283)
T 3gen_A 101 MANGCLLNYLREMR--HRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY 175 (283)
T ss_dssp CTTCBHHHHHHCGG--GCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHH
T ss_pred cCCCcHHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCccceEEEcCCCCEEEcccccccccccccc
Confidence 99999999997632 26899999999999999999999 77999999999999999999999999999986643211
Q ss_pred -CccccccccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHH
Q 011005 364 -NRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVI 441 (496)
Q Consensus 364 -~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (496)
......+|+.|+|||.+.+..++.++||||+|+++|+|++ |+.||.... ........... .........
T Consensus 176 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~-------~~~~~~~~~~~-~~~~~~~~~- 246 (283)
T 3gen_A 176 TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFT-------NSETAEHIAQG-LRLYRPHLA- 246 (283)
T ss_dssp HSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSC-------HHHHHHHHHTT-CCCCCCTTC-
T ss_pred ccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccC-------hhHHHHHHhcc-cCCCCCCcC-
Confidence 1223446788999999999999999999999999999998 999986322 11122222222 111111111
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhc
Q 011005 442 RDILLISTVSFACLQSNPKSRPTMQSVSQEFLITR 476 (496)
Q Consensus 442 ~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~ 476 (496)
...+.+++.+||+.||++|||++|+++++....
T Consensus 247 --~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~ 279 (283)
T 3gen_A 247 --SEKVYTIMYSCWHEKADERPTFKILLSNILDVM 279 (283)
T ss_dssp --CHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred --CHHHHHHHHHHccCChhHCcCHHHHHHHHHHHh
Confidence 124778999999999999999999999987643
No 118
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=6.5e-44 Score=366.35 Aligned_cols=259 Identities=24% Similarity=0.286 Sum_probs=211.4
Q ss_pred HhCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccch--hHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEE
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLI 280 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV 280 (496)
.++|.+.+.||+|+||.||+|..+ +|+.||+|++.... .......+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 262 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLV 262 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEE
Confidence 467999999999999999999765 79999999997643 122345678999999999999999999999999999999
Q ss_pred EEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccC
Q 011005 281 YEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHA 360 (496)
Q Consensus 281 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 360 (496)
|||++||+|.+++..... ..+++..++.++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+++....
T Consensus 263 mEy~~gg~L~~~l~~~~~-~~l~e~~~~~i~~qIl~aL~yLH---~~gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~ 338 (576)
T 2acx_A 263 LTLMNGGDLKFHIYHMGQ-AGFPEARAVFYAAEICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPE 338 (576)
T ss_dssp ECCCCSCBHHHHHHSSSS-CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EEcCCCCcHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHH---HCCEeccCCchheEEEeCCCCeEEEecccceeccc
Confidence 999999999999986542 25899999999999999999999 67999999999999999999999999999987643
Q ss_pred CCCCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHh-hhcCCCCCCCChh
Q 011005 361 DSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLID-VLDQRLPPPVDRK 439 (496)
Q Consensus 361 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 439 (496)
.. .....+||+.|+|||++.+..++.++||||+||++|||++|+.||..... ......... ........+ .
T Consensus 339 ~~-~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~----~~~~~~i~~~i~~~~~~~p--~- 410 (576)
T 2acx_A 339 GQ-TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKK----KIKREEVERLVKEVPEEYS--E- 410 (576)
T ss_dssp TC-CEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSS----CCCHHHHHHHHHHCCCCCC--T-
T ss_pred Cc-cccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCccccc----chhHHHHHHHhhcccccCC--c-
Confidence 32 23446899999999999999999999999999999999999999974321 011111111 111111111 1
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCC-----CHHHHHHHHHHhc
Q 011005 440 VIRDILLISTVSFACLQSNPKSRP-----TMQSVSQEFLITR 476 (496)
Q Consensus 440 ~~~~~~~l~~li~~cl~~dP~~Rp-----s~~evl~~~~~~~ 476 (496)
.....+.+|+.+||+.||++|| +++|+++|+|+..
T Consensus 411 --~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~HpfF~~ 450 (576)
T 2acx_A 411 --RFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKK 450 (576)
T ss_dssp --TSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTSGGGTT
T ss_pred --cCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhChhhcc
Confidence 0112467899999999999999 8999999999975
No 119
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=1.4e-43 Score=344.32 Aligned_cols=257 Identities=24% Similarity=0.398 Sum_probs=200.3
Q ss_pred HhCCCCcceeeecCCeeEEEEEeC-CCc----EEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEE
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLP-NGK----VFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMF 278 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~----~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 278 (496)
.++|++.+.||+|+||+||+|.+. +++ .||+|.+.........+.+.+|+.++++++||||+++++++..+. .+
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~ 92 (327)
T 3poz_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ 92 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EE
T ss_pred HHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eE
Confidence 357999999999999999999754 344 468888876554455678899999999999999999999998765 77
Q ss_pred EEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccc
Q 011005 279 LIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLL 358 (496)
Q Consensus 279 lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 358 (496)
+|+||+.+|+|.+++.... ..+++..++.++.||+.||.||| +.+|+||||||+|||++.++.+||+|||+++..
T Consensus 93 ~v~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~ 167 (327)
T 3poz_A 93 LITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 167 (327)
T ss_dssp EEEECCTTCBHHHHHHHST--TSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEETTEEEECCTTHHHHH
T ss_pred EEEEecCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHh---hCCeeCCCCChheEEECCCCCEEEccCcceeEc
Confidence 9999999999999998643 26899999999999999999999 679999999999999999999999999999877
Q ss_pred cCCCCC--ccccccccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccCCCCCCcchhHhhhcCCCCCC
Q 011005 359 HADSSN--RTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSSDPKIMLIDVLDQRLPPP 435 (496)
Q Consensus 359 ~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (496)
...... .....+|+.|+|||++.+..++.++||||||+++|||++ |+.||.... .......+......+
T Consensus 168 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~--------~~~~~~~~~~~~~~~ 239 (327)
T 3poz_A 168 GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP--------ASEISSILEKGERLP 239 (327)
T ss_dssp TTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC--------GGGHHHHHHTTCCCC
T ss_pred cCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCC--------HHHHHHHHHcCCCCC
Confidence 544332 223456789999999999999999999999999999999 999996322 112222222222111
Q ss_pred CChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhcc
Q 011005 436 VDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRK 477 (496)
Q Consensus 436 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~ 477 (496)
.... ....+.+++.+||+.||++|||+.|+++++.....
T Consensus 240 ~~~~---~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~ 278 (327)
T 3poz_A 240 QPPI---CTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 278 (327)
T ss_dssp CCTT---BCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHT
T ss_pred CCcc---CCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 1111 12247789999999999999999999999876543
No 120
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=8.8e-44 Score=348.61 Aligned_cols=263 Identities=23% Similarity=0.306 Sum_probs=202.4
Q ss_pred HHhCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchhH----HHHHHHHHHHHHHHhhcccccccccceeecCCeE
Q 011005 203 ATEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEEL----AFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCM 277 (496)
Q Consensus 203 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~----~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 277 (496)
..++|++.+.||+|+||.||+|.+. +|+.||+|.+...... ...+.+.+|+.++++++||||+++++++......
T Consensus 8 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 87 (346)
T 1ua2_A 8 RAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNI 87 (346)
T ss_dssp -----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCC
T ss_pred HhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCce
Confidence 4578999999999999999999875 5899999999754321 1224678999999999999999999999999999
Q ss_pred EEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEcccccccc
Q 011005 278 FLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARL 357 (496)
Q Consensus 278 ~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 357 (496)
++||||+++ +|.+++.... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.
T Consensus 88 ~lv~e~~~~-~l~~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~ 161 (346)
T 1ua2_A 88 SLVFDFMET-DLEVIIKDNS--LVLTPSHIKAYMLMTLQGLEYLH---QHWILHRDLKPNNLLLDENGVLKLADFGLAKS 161 (346)
T ss_dssp EEEEECCSE-EHHHHHTTCC--SSCCSSHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECCCGGGST
T ss_pred EEEEEcCCC-CHHHHHHhcC--cCCCHHHHHHHHHHHHHHHHHHH---HCCEECCCCCHHHEEEcCCCCEEEEeccccee
Confidence 999999986 8888887543 35788899999999999999999 77999999999999999999999999999987
Q ss_pred ccCCCCCccccccccccccccccccC-CcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcC------
Q 011005 358 LHADSSNRTLLAGTYGYIAPELAYTM-VMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQ------ 430 (496)
Q Consensus 358 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~------ 430 (496)
............+|+.|+|||++.+. .++.++||||+|+++|+|++|.+||...... .....+...
T Consensus 162 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~-------~~~~~i~~~~~~~~~ 234 (346)
T 1ua2_A 162 FGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDL-------DQLTRIFETLGTPTE 234 (346)
T ss_dssp TTSCCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH-------HHHHHHHHHHCCCCT
T ss_pred ccCCcccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHH-------HHHHHHHHHcCCCCh
Confidence 76554445556799999999998764 5889999999999999999999998643210 000100000
Q ss_pred ----------------CCCC-CCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccC
Q 011005 431 ----------------RLPP-PVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKT 478 (496)
Q Consensus 431 ----------------~~~~-~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~ 478 (496)
..+. +...........+.+|+.+||+.||++|||++|+++|+|+....
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h~~f~~~~ 299 (346)
T 1ua2_A 235 EQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRP 299 (346)
T ss_dssp TTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGGGTSSS
T ss_pred hhhhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcChhhhcCC
Confidence 0000 00000011123578999999999999999999999999997654
No 121
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=3.3e-44 Score=349.59 Aligned_cols=268 Identities=26% Similarity=0.355 Sum_probs=203.5
Q ss_pred HhCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccch-hHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEE
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSE-ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIY 281 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~ 281 (496)
.++|++.+.||+|+||.||+|... +++.||+|++.... .....+.+.+|+.++++++||||+++++++...+..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 103 (331)
T 4aaa_A 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVF 103 (331)
T ss_dssp GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEE
Confidence 467999999999999999999765 58999999986543 2334466789999999999999999999999999999999
Q ss_pred EecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCC
Q 011005 282 EYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHAD 361 (496)
Q Consensus 282 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 361 (496)
||+++++|.++..... .+++..+..++.|++.||.||| +.+++||||||+||+++.++.+||+|||+++.....
T Consensus 104 e~~~~~~l~~~~~~~~---~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 177 (331)
T 4aaa_A 104 EFVDHTILDDLELFPN---GLDYQVVQKYLFQIINGIGFCH---SHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAP 177 (331)
T ss_dssp ECCSEEHHHHHHHSTT---CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCTTC------
T ss_pred ecCCcchHHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHH---HCCEEccCcChheEEEcCCCcEEEEeCCCceeecCC
Confidence 9999999988876543 5899999999999999999999 779999999999999999999999999999876554
Q ss_pred CCCccccccccccccccccccC-CcCcccchhhHHHHHHHHHhCCCCCccccccCC---------CCCCcc-h---hHhh
Q 011005 362 SSNRTLLAGTYGYIAPELAYTM-VMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSS---------SSDPKI-M---LIDV 427 (496)
Q Consensus 362 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~---------~~~~~~-~---~~~~ 427 (496)
........||+.|+|||++.+. .++.++||||+|+++|+|++|+.||........ ...+.. . ....
T Consensus 178 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (331)
T 4aaa_A 178 GEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPV 257 (331)
T ss_dssp ------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGG
T ss_pred ccccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhccc
Confidence 4444556789999999999875 789999999999999999999999964321100 000000 0 0000
Q ss_pred hc-CCCCCCCCh-----hHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhcc
Q 011005 428 LD-QRLPPPVDR-----KVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRK 477 (496)
Q Consensus 428 ~~-~~~~~~~~~-----~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~ 477 (496)
.. ...+..... ........+.+|+.+||+.||++|||+.|+++|+|+...
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~f~~~ 313 (331)
T 4aaa_A 258 FAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQMD 313 (331)
T ss_dssp GTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHGG
T ss_pred cccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcCchhccC
Confidence 00 001100000 000112357899999999999999999999999999764
No 122
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=6.5e-44 Score=351.68 Aligned_cols=265 Identities=26% Similarity=0.344 Sum_probs=210.2
Q ss_pred HhCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEE
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYE 282 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e 282 (496)
.++|++.+.||+|+||+||+|.+. +++.||+|.+.........+.+.+|+.+++.++||||+++++++..++..++|||
T Consensus 32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 111 (360)
T 3eqc_A 32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 111 (360)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEE
Confidence 367999999999999999999765 6899999999876555556788999999999999999999999999999999999
Q ss_pred ecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCC
Q 011005 283 YMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADS 362 (496)
Q Consensus 283 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 362 (496)
|+++++|.+++.... .+++..+..++.|++.||.|||+ ..+|+||||||+||+++.++.++|+|||++.......
T Consensus 112 ~~~~~~L~~~l~~~~---~~~~~~~~~i~~~i~~~l~~lh~--~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 186 (360)
T 3eqc_A 112 HMDGGSLDQVLKKAG---RIPEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM 186 (360)
T ss_dssp CCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHH--HHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHC
T ss_pred CCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHH--hCCEEcCCccHHHEEECCCCCEEEEECCCCccccccc
Confidence 999999999997643 68999999999999999999994 1389999999999999999999999999997654322
Q ss_pred CCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccC---------------------------
Q 011005 363 SNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLS--------------------------- 415 (496)
Q Consensus 363 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~--------------------------- 415 (496)
.....||+.|+|||++.+..++.++||||+|+++|+|++|+.||.......
T Consensus 187 --~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (360)
T 3eqc_A 187 --ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPL 264 (360)
T ss_dssp ------CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC---------------------
T ss_pred --ccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCcc
Confidence 234578999999999999999999999999999999999999996422100
Q ss_pred ----CCCCCc----chhHhhhcCCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccC
Q 011005 416 ----SSSDPK----IMLIDVLDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKT 478 (496)
Q Consensus 416 ----~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~ 478 (496)
...... ...........+..... .....+.+|+.+||+.||++|||++|+++|+|+....
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 332 (360)
T 3eqc_A 265 NKFGMDSRPPMAIFELLDYIVNEPPPKLPSG---VFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSD 332 (360)
T ss_dssp ---------CCCHHHHHHHHHHSCCCCCCTT---TSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHHHHHHH
T ss_pred cccccCCCCcccchhhhhHHhccCCCCCCcc---cccHHHHHHHHHHhhcChhhCCCHHHHhhChHhhcch
Confidence 000000 00011111111111100 0122477999999999999999999999999998754
No 123
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=1.6e-43 Score=341.89 Aligned_cols=260 Identities=26% Similarity=0.378 Sum_probs=210.6
Q ss_pred HhCCCCcceeeecCCeeEEEEEe------CCCcEEEEEEcccchhHHHHHHHHHHHHHHHhh-cccccccccceeecCCe
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQL------PNGKVFALKKLHTSEELAFIKSFKNEAQVLSQV-LHRNIVKLYGYCLHKKC 276 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~ 276 (496)
.++|.+.+.||+|+||.||+|.+ .+++.||+|.+.........+.+.+|+.+++++ +||||+++++++..++.
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~ 101 (313)
T 1t46_A 22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGP 101 (313)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCC
Confidence 46799999999999999999974 357889999998765545567889999999999 89999999999999999
Q ss_pred EEEEEEecCCCChhhhhhCCCC---------------CccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEe
Q 011005 277 MFLIYEYMERGSLFCNLHNNED---------------AVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILL 341 (496)
Q Consensus 277 ~~lV~e~~~~g~L~~~l~~~~~---------------~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~ 341 (496)
.++||||+++|+|.+++..... ...+++..++.++.|++.||.||| +.+++||||||+||++
T Consensus 102 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~ 178 (313)
T 1t46_A 102 TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLA---SKNCIHRDLAARNILL 178 (313)
T ss_dssp CEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEE
T ss_pred cEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCccceEEE
Confidence 9999999999999999976532 124899999999999999999999 6799999999999999
Q ss_pred cCCCCeEEccccccccccCCCCC--ccccccccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccCCCC
Q 011005 342 NSKLEAFVADFGTARLLHADSSN--RTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSS 418 (496)
Q Consensus 342 ~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~ 418 (496)
+.++.+||+|||++......... .....+|+.|+|||.+.+..++.++||||||+++|+|++ |+.||....
T Consensus 179 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~------ 252 (313)
T 1t46_A 179 THGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMP------ 252 (313)
T ss_dssp ETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCC------
T ss_pred cCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCccc------
Confidence 99999999999999876544322 223457789999999999999999999999999999999 999986321
Q ss_pred CCcchhHhhhcCCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhc
Q 011005 419 DPKIMLIDVLDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITR 476 (496)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~ 476 (496)
.................... ....+.+++.+||+.||++|||+.|+++++...-
T Consensus 253 -~~~~~~~~~~~~~~~~~~~~---~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~ 306 (313)
T 1t46_A 253 -VDSKFYKMIKEGFRMLSPEH---APAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQI 306 (313)
T ss_dssp -SSHHHHHHHHHTCCCCCCTT---SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred -chhHHHHHhccCCCCCCccc---CCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHH
Confidence 11122222222211111111 1234778999999999999999999999986543
No 124
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=7.1e-44 Score=346.49 Aligned_cols=272 Identities=19% Similarity=0.268 Sum_probs=213.5
Q ss_pred ccccHHHHHHHHhCCCCc-ceeeecCCeeEEEEEeC-CCcEEEEEEcccchh-HHHHHHHHHHHHHHHhhc-cccccccc
Q 011005 193 GRIVYEDLIEATEDFDIR-YCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEE-LAFIKSFKNEAQVLSQVL-HRNIVKLY 268 (496)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~-~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~-h~niv~~~ 268 (496)
+.+.++......++|.+. +.||+|+||.||+|..+ +++.||+|++..... ......+.+|+.+++.+. ||||++++
T Consensus 16 ~n~~~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~ 95 (327)
T 3lm5_A 16 ENLYFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLH 95 (327)
T ss_dssp CCCCSBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEE
T ss_pred hhhHHHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEE
Confidence 345555666778889887 88999999999999765 689999999876432 223467889999999995 79999999
Q ss_pred ceeecCCeEEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecC---CC
Q 011005 269 GYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNS---KL 345 (496)
Q Consensus 269 ~~~~~~~~~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~---~~ 345 (496)
+++......++||||+++|+|.+++.... ...+++..++.++.|++.||+||| +.+|+||||||+||+++. ++
T Consensus 96 ~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~i~~ql~~~L~~LH---~~givH~Dikp~NIl~~~~~~~~ 171 (327)
T 3lm5_A 96 EVYENTSEIILILEYAAGGEIFSLCLPEL-AEMVSENDVIRLIKQILEGVYYLH---QNNIVHLDLKPQNILLSSIYPLG 171 (327)
T ss_dssp EEEECSSEEEEEEECCTTEEGGGGGSSCC--CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESCBTTBC
T ss_pred EEEEeCCeEEEEEEecCCCcHHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHH---HCCeecCcCChHHEEEecCCCCC
Confidence 99999999999999999999999986542 236899999999999999999999 779999999999999998 78
Q ss_pred CeEEccccccccccCCCCCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhH
Q 011005 346 EAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLI 425 (496)
Q Consensus 346 ~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~ 425 (496)
.+||+|||+++...... ......||+.|+|||++.+..++.++||||+|+++|+|++|+.||.... ......
T Consensus 172 ~~kL~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~-------~~~~~~ 243 (327)
T 3lm5_A 172 DIKIVDFGMSRKIGHAC-ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGED-------NQETYL 243 (327)
T ss_dssp CEEECCGGGCEEC----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS-------HHHHHH
T ss_pred cEEEeeCccccccCCcc-ccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-------chHHHH
Confidence 99999999998764332 2334579999999999999999999999999999999999999996322 111222
Q ss_pred hhhcCCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhcc
Q 011005 426 DVLDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRK 477 (496)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~ 477 (496)
.........+... .......+.+++.+||+.||++|||++|+++|+|+...
T Consensus 244 ~i~~~~~~~~~~~-~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h~~~~~~ 294 (327)
T 3lm5_A 244 NISQVNVDYSEET-FSSVSQLATDFIQSLLVKNPEKRPTAEICLSHSWLQQW 294 (327)
T ss_dssp HHHHTCCCCCTTT-TTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTCGGGCCC
T ss_pred HHHhcccccCchh-hcccCHHHHHHHHHHcCCChhhCcCHHHHhCCHhhccc
Confidence 2222211111110 11122347789999999999999999999999998654
No 125
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=2.3e-43 Score=362.92 Aligned_cols=263 Identities=27% Similarity=0.345 Sum_probs=211.3
Q ss_pred HHhCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchhH------------HHHHHHHHHHHHHHhhcccccccccc
Q 011005 203 ATEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEEL------------AFIKSFKNEAQVLSQVLHRNIVKLYG 269 (496)
Q Consensus 203 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------------~~~~~~~~e~~~l~~l~h~niv~~~~ 269 (496)
..++|.+.+.||+|+||+||+|..+ +++.||+|++...... ...+.+.+|+.++++++||||+++++
T Consensus 34 i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~ 113 (504)
T 3q5i_A 34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFD 113 (504)
T ss_dssp GGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred cccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence 3578999999999999999999765 6889999998764311 23467889999999999999999999
Q ss_pred eeecCCeEEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCC---C
Q 011005 270 YCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKL---E 346 (496)
Q Consensus 270 ~~~~~~~~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~---~ 346 (496)
++..+...++||||+++|+|.+.+.... .+++..+..++.||+.||+||| +.+|+||||||+||+++.++ .
T Consensus 114 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~ 187 (504)
T 3q5i_A 114 VFEDKKYFYLVTEFYEGGELFEQIINRH---KFDECDAANIMKQILSGICYLH---KHNIVHRDIKPENILLENKNSLLN 187 (504)
T ss_dssp EEECSSEEEEEEECCTTCBHHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESSTTCCSS
T ss_pred EEEcCCEEEEEEecCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCcHHHEEEecCCCCcc
Confidence 9999999999999999999999887643 6899999999999999999999 67999999999999998775 6
Q ss_pred eEEccccccccccCCCCCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHh
Q 011005 347 AFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLID 426 (496)
Q Consensus 347 ~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~ 426 (496)
+||+|||+++...... .....+||+.|+|||++.+ .++.++||||+|+++|+|++|+.||.... .......
T Consensus 188 ~kl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~-------~~~~~~~ 258 (504)
T 3q5i_A 188 IKIVDFGLSSFFSKDY-KLRDRLGTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLCGYPPFGGQN-------DQDIIKK 258 (504)
T ss_dssp EEECCCTTCEECCTTS-CBCCCCSCTTTCCHHHHTT-CBCTHHHHHHHHHHHHHHHHSSCSSCCSS-------HHHHHHH
T ss_pred EEEEECCCCEEcCCCC-ccccccCCcCCCCHHHhcc-CCCchHHHHHHHHHHHHHHhCCCCCCCCC-------HHHHHHH
Confidence 9999999998765432 3345679999999999874 68999999999999999999999996321 2222333
Q ss_pred hhcCCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCCCC
Q 011005 427 VLDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTPLV 481 (496)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~~~ 481 (496)
+.......+. ..+......+.+|+.+||+.||.+|||++|+++|+|+.+.....
T Consensus 259 i~~~~~~~~~-~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~~~~~ 312 (504)
T 3q5i_A 259 VEKGKYYFDF-NDWKNISDEAKELIKLMLTYDYNKRCTAEEALNSRWIKKYANNI 312 (504)
T ss_dssp HHHCCCCCCH-HHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHHTCCCC
T ss_pred HHcCCCCCCc-cccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcCHhhhhchhcc
Confidence 3333322211 11112234578999999999999999999999999998876543
No 126
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=1.3e-43 Score=340.12 Aligned_cols=261 Identities=16% Similarity=0.197 Sum_probs=207.5
Q ss_pred HhCCCCcceeeecCCeeEEEEEe-CCCcEEEEEEcccchhHHHHHHHHHHHHHHHhh-cccccccccceeecCCeEEEEE
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSEELAFIKSFKNEAQVLSQV-LHRNIVKLYGYCLHKKCMFLIY 281 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lV~ 281 (496)
.++|++.+.||+|+||.||+|.. .+++.||+|.+...... +.+.+|+.+++.+ +|+|++++++++......++||
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~ 85 (298)
T 1csn_A 9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDA---PQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVI 85 (298)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTTS---CCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCcc---HHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEE
Confidence 46799999999999999999975 57999999998654422 4578899999999 7999999999999999999999
Q ss_pred EecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCC-----eEEccccccc
Q 011005 282 EYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLE-----AFVADFGTAR 356 (496)
Q Consensus 282 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~-----~kl~Dfg~~~ 356 (496)
||+ +++|.+++.... ..+++..++.++.||+.||+||| +.+|+||||||+||+++.++. +||+|||+++
T Consensus 86 e~~-~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~ 159 (298)
T 1csn_A 86 DLL-GPSLEDLLDLCG--RKFSVKTVAMAAKQMLARVQSIH---EKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVK 159 (298)
T ss_dssp ECC-CCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCE
T ss_pred Eec-CCCHHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEeccCCCCCCCeEEEEECcccc
Confidence 999 999999998643 25899999999999999999999 789999999999999987776 9999999998
Q ss_pred cccCCCC-------CccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhc
Q 011005 357 LLHADSS-------NRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLD 429 (496)
Q Consensus 357 ~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 429 (496)
....... ......||+.|+|||++.+..++.++||||||+++|+|++|+.||..... ............
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~----~~~~~~~~~~~~ 235 (298)
T 1csn_A 160 FYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKA----ATNKQKYERIGE 235 (298)
T ss_dssp ESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCS----CCHHHHHHHHHH
T ss_pred ccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhc----cccHHHHHHHHh
Confidence 7754322 12345799999999999999999999999999999999999999974321 111111111111
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhcc
Q 011005 430 QRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRK 477 (496)
Q Consensus 430 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~ 477 (496)
.....+...........+.+++.+||+.||++|||++++++.+.....
T Consensus 236 ~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~ 283 (298)
T 1csn_A 236 KKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLE 283 (298)
T ss_dssp HHHHSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHH
T ss_pred hccCccHHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHH
Confidence 111111100001112357899999999999999999999998876654
No 127
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=6.5e-44 Score=345.24 Aligned_cols=268 Identities=20% Similarity=0.330 Sum_probs=202.3
Q ss_pred HhCCCCc-ceeeecCCeeEEEEEeC-CCcEEEEEEcccchhHHHHHHHHHHHHHHHhh-cccccccccceeecCCeEEEE
Q 011005 204 TEDFDIR-YCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFKNEAQVLSQV-LHRNIVKLYGYCLHKKCMFLI 280 (496)
Q Consensus 204 ~~~~~~~-~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lV 280 (496)
.+.|.+. +.||+|+||+||+|... +++.||||++..... .....+.+|+.++.++ +||||+++++++..++..++|
T Consensus 11 ~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv 89 (316)
T 2ac3_A 11 EDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPG-HIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLV 89 (316)
T ss_dssp TTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSS-CCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred ceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcc-hhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEE
Confidence 3578874 78999999999999754 789999999976432 2346788999999985 799999999999999999999
Q ss_pred EEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCC---eEEcccccccc
Q 011005 281 YEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLE---AFVADFGTARL 357 (496)
Q Consensus 281 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~---~kl~Dfg~~~~ 357 (496)
|||+++|+|.+++.... .+++..+..++.||+.||+||| +.+|+||||||+||+++.++. +||+|||++..
T Consensus 90 ~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~ 163 (316)
T 2ac3_A 90 FEKMRGGSILSHIHKRR---HFNELEASVVVQDVASALDFLH---NKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSG 163 (316)
T ss_dssp EECCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC-
T ss_pred EEcCCCCcHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHH---hCCceeCCCCHHHEEEccCCCcCceEEEEccCccc
Confidence 99999999999997643 6899999999999999999999 679999999999999998776 99999999976
Q ss_pred ccCCCC-------Ccccccccccccccccccc-----CCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCC-----
Q 011005 358 LHADSS-------NRTLLAGTYGYIAPELAYT-----MVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDP----- 420 (496)
Q Consensus 358 ~~~~~~-------~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~----- 420 (496)
...... .....+||+.|+|||++.+ ..++.++||||+|+++|+|++|+.||............
T Consensus 164 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~ 243 (316)
T 2ac3_A 164 IKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACP 243 (316)
T ss_dssp ------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCH
T ss_pred cccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccch
Confidence 542211 1223468999999999875 56889999999999999999999999754321111000
Q ss_pred ---cchhHhhhcCCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCC
Q 011005 421 ---KIMLIDVLDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTP 479 (496)
Q Consensus 421 ---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~ 479 (496)
......+.......+. .........+.+++.+||+.||++|||++|+++|+|+....+
T Consensus 244 ~~~~~~~~~i~~~~~~~~~-~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~~~~~ 304 (316)
T 2ac3_A 244 ACQNMLFESIQEGKYEFPD-KDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGCAP 304 (316)
T ss_dssp HHHHHHHHHHHHCCCCCCH-HHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSTTCC----
T ss_pred hHHHHHHHHHhccCcccCc-hhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcChhhcCCCC
Confidence 0011222222222111 111112235789999999999999999999999999976544
No 128
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=2.8e-43 Score=355.07 Aligned_cols=268 Identities=24% Similarity=0.270 Sum_probs=202.1
Q ss_pred HhCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccch-hHHHHHHHHHHHHHHHhhcccccccccceeecC-----Ce
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSE-ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHK-----KC 276 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~-----~~ 276 (496)
.++|.+.+.||+|+||.||+|.+. +++.||||++.... .....+.+.+|+.++++++||||+++++++... ..
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 104 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE 104 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence 468999999999999999999764 68899999997642 334457789999999999999999999999776 57
Q ss_pred EEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccc
Q 011005 277 MFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTAR 356 (496)
Q Consensus 277 ~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~ 356 (496)
.++||||++ |+|.+++.... .+++..+..++.||+.||.||| +.+|+||||||+|||++.++.+||+|||+++
T Consensus 105 ~~lv~e~~~-~~L~~~~~~~~---~l~~~~~~~i~~qil~aL~~LH---~~givHrDlkp~NILl~~~~~~kL~DFGla~ 177 (432)
T 3n9x_A 105 LYIVLEIAD-SDLKKLFKTPI---FLTEEHIKTILYNLLLGENFIH---ESGIIHRDLKPANCLLNQDCSVKVCDFGLAR 177 (432)
T ss_dssp EEEEEECCS-EEHHHHHHSSC---CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred EEEEEecCC-cCHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHH---HCCCCCCCCCHHHeEECCCCCEEEccCCCcc
Confidence 899999986 59999997643 6899999999999999999999 7799999999999999999999999999998
Q ss_pred cccCCCC----------------------Ccccccccccccccccc-ccCCcCcccchhhHHHHHHHHHhCCCCCccccc
Q 011005 357 LLHADSS----------------------NRTLLAGTYGYIAPELA-YTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSS 413 (496)
Q Consensus 357 ~~~~~~~----------------------~~~~~~gt~~y~aPE~~-~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~ 413 (496)
....... .....+||+.|+|||++ .+..++.++||||+||++|||++|..||.....
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~ 257 (432)
T 3n9x_A 178 TINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPT 257 (432)
T ss_dssp EC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTCSSGG
T ss_pred cccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccccccc
Confidence 7654321 12456799999999986 566799999999999999999997666542211
Q ss_pred cCCCCCC--------------------------------------------cchhHhhhc---CCCCCCCChhHHHHHHH
Q 011005 414 LSSSSDP--------------------------------------------KIMLIDVLD---QRLPPPVDRKVIRDILL 446 (496)
Q Consensus 414 ~~~~~~~--------------------------------------------~~~~~~~~~---~~~~~~~~~~~~~~~~~ 446 (496)
......+ .......+. ...+.............
T Consensus 258 ~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~ql~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 337 (432)
T 3n9x_A 258 NRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKYPSISDD 337 (432)
T ss_dssp GCCCSCCCSCSCC----------CHHHHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHH
T ss_pred cccccCCCccccccCcccccccccccchHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCCCCCCCCHHHHCCCCCHH
Confidence 1000000 000000000 00000000000111235
Q ss_pred HHHHHHhcccCCCCCCCCHHHHHHHHHHhccC
Q 011005 447 ISTVSFACLQSNPKSRPTMQSVSQEFLITRKT 478 (496)
Q Consensus 447 l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~ 478 (496)
+.+|+.+||+.||++|||++|+++|+|+....
T Consensus 338 ~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~ 369 (432)
T 3n9x_A 338 GINLLESMLKFNPNKRITIDQALDHPYLKDVR 369 (432)
T ss_dssp HHHHHHHHSCSSTTTSCCHHHHHTCGGGTTTC
T ss_pred HHHHHHHHhcCCcccCCCHHHHhcChhhhhcc
Confidence 77999999999999999999999999998653
No 129
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=1.4e-43 Score=363.64 Aligned_cols=259 Identities=25% Similarity=0.333 Sum_probs=205.7
Q ss_pred HHhCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccch-hHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEE
Q 011005 203 ATEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSE-ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLI 280 (496)
Q Consensus 203 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV 280 (496)
..++|++.+.||+|+||+||+|..+ ++..||+|++.... .......+.+|+.+++.++||||+++++++......++|
T Consensus 35 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 114 (494)
T 3lij_A 35 LSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLV 114 (494)
T ss_dssp HHHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 3567999999999999999999765 68899999987643 122246688999999999999999999999999999999
Q ss_pred EEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCC---CCeEEcccccccc
Q 011005 281 YEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSK---LEAFVADFGTARL 357 (496)
Q Consensus 281 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~---~~~kl~Dfg~~~~ 357 (496)
|||+++|+|.+.+.... .+++..+..++.||+.||.||| +.+|+||||||+|||++.. +.+||+|||++..
T Consensus 115 ~e~~~~g~L~~~~~~~~---~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~ 188 (494)
T 3lij_A 115 MECYKGGELFDEIIHRM---KFNEVDAAVIIKQVLSGVTYLH---KHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAV 188 (494)
T ss_dssp EECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEE
T ss_pred EecCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---HCCceeccCChhhEEEeCCCCCCcEEEEECCCCeE
Confidence 99999999998887543 6899999999999999999999 7799999999999999764 5599999999987
Q ss_pred ccCCCCCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCC
Q 011005 358 LHADSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVD 437 (496)
Q Consensus 358 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (496)
..... .....+||+.|+|||++. ..++.++||||+||++|+|++|+.||.... .......+.......+..
T Consensus 189 ~~~~~-~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~-------~~~~~~~i~~~~~~~~~~ 259 (494)
T 3lij_A 189 FENQK-KMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQT-------DQEILRKVEKGKYTFDSP 259 (494)
T ss_dssp CBTTB-CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSS-------HHHHHHHHHHTCCCCCSG
T ss_pred CCCCc-cccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCC-------HHHHHHHHHhCCCCCCch
Confidence 65432 334467999999999886 468999999999999999999999996322 122222333332222111
Q ss_pred hhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhcc
Q 011005 438 RKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRK 477 (496)
Q Consensus 438 ~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~ 477 (496)
.+......+.+++.+||+.||++|||+.|+++|+|+...
T Consensus 260 -~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~hp~~~~~ 298 (494)
T 3lij_A 260 -EWKNVSEGAKDLIKQMLQFDSQRRISAQQALEHPWIKEM 298 (494)
T ss_dssp -GGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTCHHHHHH
T ss_pred -hcccCCHHHHHHHHHHCCCChhhCccHHHHhcCcccccC
Confidence 111222357799999999999999999999999999763
No 130
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=2.9e-43 Score=333.82 Aligned_cols=257 Identities=23% Similarity=0.380 Sum_probs=203.1
Q ss_pred hCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccch--hHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEE
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIY 281 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~ 281 (496)
++|.+.+.||+|+||.||+|.++ +++.||+|.+.... .....+.+.+|+.+++.++||||+++++++...+..++||
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 90 (276)
T 2h6d_A 11 GHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVM 90 (276)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEEE
Confidence 67999999999999999999875 78999999987643 2233467889999999999999999999999999999999
Q ss_pred EecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCC
Q 011005 282 EYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHAD 361 (496)
Q Consensus 282 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 361 (496)
||+++++|.+++.... .+++..+..++.|++.||.||| +.+++||||||+||+++.++.++|+|||++......
T Consensus 91 e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~ 164 (276)
T 2h6d_A 91 EYVSGGELFDYICKHG---RVEEMEARRLFQQILSAVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG 164 (276)
T ss_dssp ECCCSCBHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHH---HHCSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC-
T ss_pred eccCCCcHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCChhhEEECCCCCEEEeecccccccCCC
Confidence 9999999999997643 6899999999999999999999 679999999999999999999999999999876433
Q ss_pred CCCccccccccccccccccccCCc-CcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhH
Q 011005 362 SSNRTLLAGTYGYIAPELAYTMVM-TEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKV 440 (496)
Q Consensus 362 ~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 440 (496)
. ......+++.|+|||.+.+..+ +.++||||+|+++|+|++|+.||.... ...............+..
T Consensus 165 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~-------~~~~~~~~~~~~~~~~~~--- 233 (276)
T 2h6d_A 165 E-FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEH-------VPTLFKKIRGGVFYIPEY--- 233 (276)
T ss_dssp -------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSS-------HHHHHHHHHHCCCCCCTT---
T ss_pred c-ceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCc-------HHHHHHHhhcCcccCchh---
Confidence 2 2234568999999999988765 589999999999999999999986321 111122222222111111
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCCC
Q 011005 441 IRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTPL 480 (496)
Q Consensus 441 ~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~~ 480 (496)
....+.+++.+||+.||++|||+.|+++|+|+....+.
T Consensus 234 --~~~~l~~li~~~l~~~p~~Rps~~~~l~h~~~~~~~~~ 271 (276)
T 2h6d_A 234 --LNRSVATLLMHMLQVDPLKRATIKDIREHEWFKQDLPS 271 (276)
T ss_dssp --SCHHHHHHHHHHTCSSGGGSCCHHHHHHSHHHHTTCCG
T ss_pred --cCHHHHHHHHHHccCChhhCCCHHHHHhChhhccCchh
Confidence 11246789999999999999999999999999876543
No 131
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=2.4e-44 Score=347.42 Aligned_cols=260 Identities=25% Similarity=0.368 Sum_probs=202.1
Q ss_pred HhCCCCcceeeecCCeeEEEEEe-CCCcEEEEEEcccch--hHHHHHHHHHHHHHHHhhcccccccccceeecCC----e
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKK----C 276 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~----~ 276 (496)
.++|++.+.||+|+||.||+|.+ .+++.||+|++.... .......+.+|+.++++++||||+++++++.... .
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 90 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL 90 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence 46899999999999999999975 578999999997642 3344567899999999999999999999987644 3
Q ss_pred EEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccc
Q 011005 277 MFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTAR 356 (496)
Q Consensus 277 ~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~ 356 (496)
.++||||+++++|.+++.... .+++..++.++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++
T Consensus 91 ~~lv~e~~~g~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~ 164 (311)
T 3ork_A 91 PYIVMEYVDGVTLRDIVHTEG---PMTPKRAIEVIADACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIAR 164 (311)
T ss_dssp EEEEEECCCEEEHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEETTSCEEECCCSCC-
T ss_pred cEEEEecCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---HCCCCcCCCCHHHEEEcCCCCEEEeeccCcc
Confidence 599999999999999997643 6899999999999999999999 6799999999999999999999999999998
Q ss_pred cccCCCC---CccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCC
Q 011005 357 LLHADSS---NRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLP 433 (496)
Q Consensus 357 ~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (496)
....... ......||+.|+|||++.+..++.++||||||+++|+|++|+.||.... ..............
T Consensus 165 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~-------~~~~~~~~~~~~~~ 237 (311)
T 3ork_A 165 AIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDS-------PVSVAYQHVREDPI 237 (311)
T ss_dssp -----------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS-------HHHHHHHHHHCCCC
T ss_pred cccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCC-------hHHHHHHHhcCCCC
Confidence 7644322 1233568999999999999999999999999999999999999996322 11122222222221
Q ss_pred CCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhcc
Q 011005 434 PPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRK 477 (496)
Q Consensus 434 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~ 477 (496)
.+. .........+.+++.+||+.||++||++.+++++.|....
T Consensus 238 ~~~-~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~ 280 (311)
T 3ork_A 238 PPS-ARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVH 280 (311)
T ss_dssp CHH-HHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred Ccc-cccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHHh
Confidence 110 0001122347789999999999999999999999887643
No 132
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=1.3e-43 Score=360.77 Aligned_cols=267 Identities=24% Similarity=0.283 Sum_probs=189.6
Q ss_pred HhCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccch-hHHHHHHHHHHHHHHHhhcccccccccceeec-----CCe
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSE-ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLH-----KKC 276 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-----~~~ 276 (496)
.++|++.+.||+|+||+||+|.++ +++.||||++.... .....+.+.+|+.++++++||||+++++++.. ...
T Consensus 52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 131 (458)
T 3rp9_A 52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE 131 (458)
T ss_dssp CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCce
Confidence 368999999999999999999754 78999999986532 33445778999999999999999999999844 357
Q ss_pred EEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccc
Q 011005 277 MFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTAR 356 (496)
Q Consensus 277 ~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~ 356 (496)
.++||||+ +|+|.+++.... .+++..+..++.||+.||.||| +.+|+||||||+|||++.++.+||+|||+++
T Consensus 132 ~~lv~e~~-~~~L~~~~~~~~---~l~~~~~~~~~~qi~~aL~~LH---~~~iiHrDlKp~NILl~~~~~~kl~DFGla~ 204 (458)
T 3rp9_A 132 LYVVLEIA-DSDFKKLFRTPV---YLTELHIKTLLYNLLVGVKYVH---SAGILHRDLKPANCLVNQDCSVKVCDFGLAR 204 (458)
T ss_dssp EEEEECCC-SEEHHHHHHSSC---CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTCCEEECCCTTCB
T ss_pred EEEEEecc-ccchhhhcccCC---CCCHHHHHHHHHHHHHHHHHHH---hCCcCCCCCChhhEEECCCCCEeecccccch
Confidence 89999998 468998887643 6899999999999999999999 7799999999999999999999999999998
Q ss_pred cccCCCC---------------------------Ccccccccccccccccc-ccCCcCcccchhhHHHHHHHHHh-----
Q 011005 357 LLHADSS---------------------------NRTLLAGTYGYIAPELA-YTMVMTEKCDVYSFGVVTLEVLM----- 403 (496)
Q Consensus 357 ~~~~~~~---------------------------~~~~~~gt~~y~aPE~~-~~~~~~~~~DvwslG~il~el~~----- 403 (496)
....... .....+||+.|+|||++ .+..++.++||||+||++|||++
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~~~ 284 (458)
T 3rp9_A 205 TVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKEN 284 (458)
T ss_dssp CTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTTT
T ss_pred hccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhcccc
Confidence 7643221 12335789999999976 56679999999999999999999
Q ss_pred ------CCCCCccccccCCCCCCc-------------c---hhHhhh-----------------------cCCCCCCCCh
Q 011005 404 ------GKHPRDILSSLSSSSDPK-------------I---MLIDVL-----------------------DQRLPPPVDR 438 (496)
Q Consensus 404 ------g~~p~~~~~~~~~~~~~~-------------~---~~~~~~-----------------------~~~~~~~~~~ 438 (496)
|+++|............. . .+.+.+ ..........
T Consensus 285 ~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (458)
T 3rp9_A 285 VAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLAE 364 (458)
T ss_dssp CSSGGGCCCSCC--------------------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTTSCCCCCCCGGG
T ss_pred ccccccccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHhcCCCCCCCHHH
Confidence 455553322110000000 0 000000 0000000000
Q ss_pred hHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhcc
Q 011005 439 KVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRK 477 (496)
Q Consensus 439 ~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~ 477 (496)
........+.+|+.+||..||++|||++|+++|+|+...
T Consensus 365 ~~~~~s~~~~dLl~~mL~~dP~~R~t~~e~L~Hp~f~~~ 403 (458)
T 3rp9_A 365 RFPASSADAIHLLKRMLVFNPNKRITINECLAHPFFKEV 403 (458)
T ss_dssp GSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTT
T ss_pred HCCCCCHHHHHHHHHHhccCccccCCHHHHhcCHhhhhc
Confidence 001112347799999999999999999999999999865
No 133
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=3.5e-43 Score=335.80 Aligned_cols=254 Identities=25% Similarity=0.388 Sum_probs=201.8
Q ss_pred CCCCcceeeecCCeeEEEEEe-CCCcEEEEEEcccch-hHHHHHHHHHHHHHHHhhcccccccccceeec----CCeEEE
Q 011005 206 DFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSE-ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLH----KKCMFL 279 (496)
Q Consensus 206 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~----~~~~~l 279 (496)
.|.+.+.||+|+||+||+|.+ .++..||+|.+.... .....+.+.+|+.++++++||||+++++++.. ....++
T Consensus 27 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 106 (290)
T 1t4h_A 27 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL 106 (290)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEE
T ss_pred eEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEE
Confidence 477788999999999999976 468899999987643 33445778999999999999999999998865 456899
Q ss_pred EEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCC--eEEeCCCCCceEec-CCCCeEEccccccc
Q 011005 280 IYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPS--IIHRDISSNNILLN-SKLEAFVADFGTAR 356 (496)
Q Consensus 280 V~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~--i~H~dlkp~Nil~~-~~~~~kl~Dfg~~~ 356 (496)
||||+++|+|.+++.... .+++..++.++.|++.||.||| +.+ ++||||||+||+++ .++.+||+|||++.
T Consensus 107 v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH---~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~ 180 (290)
T 1t4h_A 107 VTELMTSGTLKTYLKRFK---VMKIKVLRSWCRQILKGLQFLH---TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLAT 180 (290)
T ss_dssp EEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHH---TSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGG
T ss_pred EEEecCCCCHHHHHHHcc---CCCHHHHHHHHHHHHHHHHHHH---cCCCCEEECCCCHHHEEEECCCCCEEEeeCCCcc
Confidence 999999999999997643 6899999999999999999999 667 99999999999998 78999999999997
Q ss_pred cccCCCCCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCC
Q 011005 357 LLHADSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPV 436 (496)
Q Consensus 357 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (496)
.... .......||+.|+|||++.+ .++.++||||+|+++|+|++|+.||.... ..............+...
T Consensus 181 ~~~~--~~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~pf~~~~------~~~~~~~~~~~~~~~~~~ 251 (290)
T 1t4h_A 181 LKRA--SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQ------NAAQIYRRVTSGVKPASF 251 (290)
T ss_dssp GCCT--TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCS------SHHHHHHHHTTTCCCGGG
T ss_pred cccc--cccccccCCcCcCCHHHHhc-cCCCcchHHHHHHHHHHHHhCCCCCCCcC------cHHHHHHHHhccCCcccc
Confidence 5433 23344578999999998874 58999999999999999999999996321 111111122212111111
Q ss_pred ChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhcc
Q 011005 437 DRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRK 477 (496)
Q Consensus 437 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~ 477 (496)
.. .....+.+++.+||+.||++|||+.|+++|+|+...
T Consensus 252 ~~---~~~~~l~~li~~~l~~dp~~Rps~~ell~h~~f~~~ 289 (290)
T 1t4h_A 252 DK---VAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQEE 289 (290)
T ss_dssp GG---CCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC--
T ss_pred CC---CCCHHHHHHHHHHccCChhhCCCHHHHhhCcccccC
Confidence 11 112347899999999999999999999999998654
No 134
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=2.3e-43 Score=333.62 Aligned_cols=249 Identities=28% Similarity=0.483 Sum_probs=192.6
Q ss_pred hCCCCcceeeecCCeeEEEEEeCCCcEEEEEEcccchh---HHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEE
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEE---LAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIY 281 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~ 281 (496)
++|++.+.||+|+||.||+|.+. ++.||+|.++.... ....+.+.+|+++++.++||||+++++++..++..++||
T Consensus 7 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 85 (271)
T 3dtc_A 7 AELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVM 85 (271)
T ss_dssp TSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEE
T ss_pred hheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEE
Confidence 57889999999999999999884 88999999876432 223467889999999999999999999999999999999
Q ss_pred EecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCC---eEEeCCCCCceEecC--------CCCeEEc
Q 011005 282 EYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPS---IIHRDISSNNILLNS--------KLEAFVA 350 (496)
Q Consensus 282 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~---i~H~dlkp~Nil~~~--------~~~~kl~ 350 (496)
||+++++|.+++... .+++..++.++.|++.||.||| +.+ ++||||||+||+++. ++.++|+
T Consensus 86 e~~~~~~L~~~~~~~----~~~~~~~~~i~~~l~~~l~~lH---~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~ 158 (271)
T 3dtc_A 86 EFARGGPLNRVLSGK----RIPPDILVNWAVQIARGMNYLH---DEAIVPIIHRDLKSSNILILQKVENGDLSNKILKIT 158 (271)
T ss_dssp ECCTTEEHHHHHTSS----CCCHHHHHHHHHHHHHHHHHHH---HSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEEC
T ss_pred EcCCCCCHHHHhhcC----CCCHHHHHHHHHHHHHHHHHHH---hCCCCceeecCCchHHEEEecccccccccCcceEEc
Confidence 999999999998643 6899999999999999999999 556 999999999999986 6789999
Q ss_pred cccccccccCCCCCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcC
Q 011005 351 DFGTARLLHADSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQ 430 (496)
Q Consensus 351 Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 430 (496)
|||++....... .....||+.|+|||.+.+..++.++||||+|+++|+|++|+.||.... ...........
T Consensus 159 Dfg~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~-------~~~~~~~~~~~ 229 (271)
T 3dtc_A 159 DFGLAREWHRTT--KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGID-------GLAVAYGVAMN 229 (271)
T ss_dssp CCCC---------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSC-------HHHHHHHHHTS
T ss_pred cCCccccccccc--ccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-------HHHHHHhhhcC
Confidence 999998664332 224578999999999999999999999999999999999999996322 11222222222
Q ss_pred CCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHH
Q 011005 431 RLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFL 473 (496)
Q Consensus 431 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~ 473 (496)
....+.... ....+.+++.+||+.||++|||+.|+++++.
T Consensus 230 ~~~~~~~~~---~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~ 269 (271)
T 3dtc_A 230 KLALPIPST---CPEPFAKLMEDCWNPDPHSRPSFTNILDQLT 269 (271)
T ss_dssp CCCCCCCTT---CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCCCCCcc---cCHHHHHHHHHHhcCCcccCcCHHHHHHHHh
Confidence 222221111 1224778999999999999999999999974
No 135
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=3.2e-43 Score=334.51 Aligned_cols=255 Identities=25% Similarity=0.357 Sum_probs=195.5
Q ss_pred HhCCCCcceeeecCCeeEEEEEeCC----CcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEE
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLPN----GKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFL 279 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 279 (496)
.++|++.+.||+|+||.||+|.+.. +..||+|.+.........+.+.+|+.++++++||||+++++++. .+..++
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~l 92 (281)
T 1mp8_A 14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWI 92 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEE
T ss_pred hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccEE
Confidence 4678999999999999999997643 45799999887655555678899999999999999999999985 456789
Q ss_pred EEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEcccccccccc
Q 011005 280 IYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLH 359 (496)
Q Consensus 280 V~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 359 (496)
||||+++|+|.+++.... ..+++..++.++.|++.||.||| +.+++||||||+||+++.++.+||+|||+++...
T Consensus 93 v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 167 (281)
T 1mp8_A 93 IMELCTLGELRSFLQVRK--YSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME 167 (281)
T ss_dssp EEECCTTEEHHHHHHHTT--TTSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECC--------
T ss_pred EEecCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHH---hCCeecccccHHHEEECCCCCEEECccccccccC
Confidence 999999999999997543 25899999999999999999999 6799999999999999999999999999998765
Q ss_pred CCCCC-ccccccccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccCCCCCCcchhHhhhcCCCCCCCC
Q 011005 360 ADSSN-RTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVD 437 (496)
Q Consensus 360 ~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (496)
..... .....+++.|+|||.+.+..++.++||||+|+++|||++ |..||.... .......+....... ..
T Consensus 168 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~-------~~~~~~~i~~~~~~~-~~ 239 (281)
T 1mp8_A 168 DSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVK-------NNDVIGRIENGERLP-MP 239 (281)
T ss_dssp -----------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCC-------GGGHHHHHHTTCCCC-CC
T ss_pred cccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCC-------HHHHHHHHHcCCCCC-CC
Confidence 43221 223456789999999999999999999999999999996 999986322 111222222221111 11
Q ss_pred hhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHh
Q 011005 438 RKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLIT 475 (496)
Q Consensus 438 ~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~ 475 (496)
. .....+.+++.+||+.||++|||+.|+++++...
T Consensus 240 ~---~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~ 274 (281)
T 1mp8_A 240 P---NCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 274 (281)
T ss_dssp T---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred C---CCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 1 1123477899999999999999999999998764
No 136
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.8e-43 Score=351.30 Aligned_cols=268 Identities=21% Similarity=0.289 Sum_probs=212.5
Q ss_pred HhCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCC--eEEEE
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKK--CMFLI 280 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~--~~~lV 280 (496)
.++|.+.+.||+|+||+||+|.+. +++.||||++.........+.+.+|++++++++||||+++++++.... ..++|
T Consensus 8 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv 87 (396)
T 4eut_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI 87 (396)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred CCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEE
Confidence 357899999999999999999765 589999999987554444567789999999999999999999998755 78999
Q ss_pred EEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEe----cCCCCeEEccccccc
Q 011005 281 YEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILL----NSKLEAFVADFGTAR 356 (496)
Q Consensus 281 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~----~~~~~~kl~Dfg~~~ 356 (496)
|||+++|+|.+++........+++..++.++.||+.||+||| +.+|+||||||+||++ +.++.+||+|||+++
T Consensus 88 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~ 164 (396)
T 4eut_A 88 MEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR 164 (396)
T ss_dssp ECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEECTTSCEEEEECCGGGCE
T ss_pred EecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHH---HCCEEECCcCHHHEEEeecCCCceeEEEecCCCce
Confidence 999999999999987654445899999999999999999999 7799999999999999 777889999999998
Q ss_pred cccCCCCCcccccccccccccccccc--------CCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhh
Q 011005 357 LLHADSSNRTLLAGTYGYIAPELAYT--------MVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVL 428 (496)
Q Consensus 357 ~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~ 428 (496)
...... ......||+.|+|||++.+ ..++.++||||||+++|||++|+.||..... ............
T Consensus 165 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~---~~~~~~~~~~~~ 240 (396)
T 4eut_A 165 ELEDDE-QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEG---PRRNKEVMYKII 240 (396)
T ss_dssp ECCCGG-GSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTC---TTTCHHHHHHHH
T ss_pred EccCCC-ccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCc---ccchHHHHHHHh
Confidence 764432 2334579999999999875 5678899999999999999999999974322 111112222222
Q ss_pred cCCCC--------------------CCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccC
Q 011005 429 DQRLP--------------------PPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKT 478 (496)
Q Consensus 429 ~~~~~--------------------~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~ 478 (496)
....+ +............+.+++.+||+.||++|||++|+++++...-..
T Consensus 241 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~ 310 (396)
T 4eut_A 241 TGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHR 310 (396)
T ss_dssp HSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTC
T ss_pred cCCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhhc
Confidence 22111 001111233445678999999999999999999999998765443
No 137
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=4.8e-44 Score=339.76 Aligned_cols=262 Identities=26% Similarity=0.406 Sum_probs=208.2
Q ss_pred HhCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccch-hHHHHHHHHHHHHHHHhhcccccccccceee--cCCeEEE
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSE-ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCL--HKKCMFL 279 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~--~~~~~~l 279 (496)
.++|++.+.||+|+||.||+|..+ +++.||+|.+.... .....+.+.+|+.++++++||||+++++++. .....++
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 84 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 84 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence 367999999999999999999765 68999999997643 2344567899999999999999999999874 4668999
Q ss_pred EEEecCCCChhhhhhCCC-CCccCCHHHHHHHHHHHHHHHHHHHhCCCCC-----eEEeCCCCCceEecCCCCeEEcccc
Q 011005 280 IYEYMERGSLFCNLHNNE-DAVELDWAKRVNIVKAMAHALAYLHHDCSPS-----IIHRDISSNNILLNSKLEAFVADFG 353 (496)
Q Consensus 280 V~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~-----i~H~dlkp~Nil~~~~~~~kl~Dfg 353 (496)
||||+++++|.+++.... ....+++..++.++.|++.||+||| ..+ ++||||||+||+++.++.+||+|||
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg 161 (279)
T 2w5a_A 85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECH---RRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFG 161 (279)
T ss_dssp EEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HHC------CCCCCSGGGEEECSSSCEEECCCC
T ss_pred EEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHh---cccCCCCeeEEeccchhhEEEcCCCCEEEecCc
Confidence 999999999999987532 2234899999999999999999999 556 9999999999999999999999999
Q ss_pred ccccccCCCCCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCC
Q 011005 354 TARLLHADSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLP 433 (496)
Q Consensus 354 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (496)
+++.............|++.|+|||.+.+..++.++||||||+++|+|++|+.||.... .............+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-------~~~~~~~i~~~~~~ 234 (279)
T 2w5a_A 162 LARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFS-------QKELAGKIREGKFR 234 (279)
T ss_dssp HHHHC---CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSS-------HHHHHHHHHHTCCC
T ss_pred hheeeccccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccC-------HHHHHHHHhhcccc
Confidence 99876544333334578999999999999999999999999999999999999986322 11122222222221
Q ss_pred CCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCC
Q 011005 434 PPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTP 479 (496)
Q Consensus 434 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~ 479 (496)
..... ....+.+++.+||+.||++|||+.|+++++|.....+
T Consensus 235 ~~~~~----~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~~~~~~ 276 (279)
T 2w5a_A 235 RIPYR----YSDELNEIITRMLNLKDYHRPSVEEILENPLILEHHH 276 (279)
T ss_dssp CCCTT----SCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTCCGGGS
T ss_pred cCCcc----cCHHHHHHHHHHcCCCcccCCCHHHHHhChhhhhhcc
Confidence 11111 1234778999999999999999999999999876644
No 138
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=3.3e-43 Score=336.73 Aligned_cols=262 Identities=23% Similarity=0.361 Sum_probs=204.1
Q ss_pred CCCCcceeeecCCeeEEEEEe-CCCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEec
Q 011005 206 DFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEYM 284 (496)
Q Consensus 206 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~~ 284 (496)
+|.....||+|+||.||+|.+ .+++.||+|.+..... ...+.+.+|+.+++.++||||+++++++...+..++||||+
T Consensus 23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 101 (295)
T 2clq_A 23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDS-RYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQV 101 (295)
T ss_dssp TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC----HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCch-HHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeC
Confidence 455566899999999999975 4688999999876542 33467889999999999999999999999999999999999
Q ss_pred CCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecC-CCCeEEccccccccccCCCC
Q 011005 285 ERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNS-KLEAFVADFGTARLLHADSS 363 (496)
Q Consensus 285 ~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~-~~~~kl~Dfg~~~~~~~~~~ 363 (496)
++++|.+++........+++..+..++.|++.||.||| +.+++||||||+||+++. ++.++|+|||++........
T Consensus 102 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~ 178 (295)
T 2clq_A 102 PGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLH---DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINP 178 (295)
T ss_dssp SEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC---
T ss_pred CCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHH---hCCEEccCCChhhEEEECCCCCEEEeecccccccCCCCC
Confidence 99999999987654456788999999999999999999 679999999999999987 89999999999987654433
Q ss_pred CccccccccccccccccccCC--cCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHH
Q 011005 364 NRTLLAGTYGYIAPELAYTMV--MTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVI 441 (496)
Q Consensus 364 ~~~~~~gt~~y~aPE~~~~~~--~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (496)
......|++.|+|||++.+.. ++.++||||||+++|+|++|+.||..... ...................
T Consensus 179 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~------~~~~~~~~~~~~~~~~~~~--- 249 (295)
T 2clq_A 179 CTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGE------PQAAMFKVGMFKVHPEIPE--- 249 (295)
T ss_dssp --CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSS------HHHHHHHHHHHCCCCCCCT---
T ss_pred cccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCc------hhHHHHhhccccccccccc---
Confidence 344567899999999987654 78999999999999999999999964321 1111111101111111111
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCCC
Q 011005 442 RDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTPL 480 (496)
Q Consensus 442 ~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~~ 480 (496)
.....+.+++.+||+.||++|||+.|+++|+|+......
T Consensus 250 ~~~~~~~~li~~~l~~dp~~Rps~~~ll~~~~~~~~~~~ 288 (295)
T 2clq_A 250 SMSAEAKAFILKCFEPDPDKRACANDLLVDEFLKVSSKK 288 (295)
T ss_dssp TSCHHHHHHHHHTTCSSTTTSCCHHHHHTSGGGCC----
T ss_pred cCCHHHHHHHHHHccCChhhCCCHHHHhcChhhhhcccc
Confidence 011246789999999999999999999999999765443
No 139
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.4e-43 Score=347.87 Aligned_cols=266 Identities=23% Similarity=0.273 Sum_probs=199.8
Q ss_pred HhCCCCcceeeecCCeeEEEEEe-CCCcEEEEEEcccch-hHHHHHHHHHHHHHHHhhcccccccccceeecCC------
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSE-ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKK------ 275 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~------ 275 (496)
.++|++.+.||+|+||.||+|.+ .+|+.||||++.... .....+.+.+|+.+++.++||||+++++++....
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 103 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT 103 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence 46799999999999999999976 479999999996532 3344567899999999999999999999997653
Q ss_pred eEEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEcccccc
Q 011005 276 CMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTA 355 (496)
Q Consensus 276 ~~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~ 355 (496)
..++||||+ +++|.+++... .+++..+..++.||+.||.||| +.||+||||||+||+++.++.+||+|||++
T Consensus 104 ~~~lv~e~~-~~~L~~~~~~~----~l~~~~~~~~~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 175 (367)
T 1cm8_A 104 DFYLVMPFM-GTDLGKLMKHE----KLGEDRIQFLVYQMLKGLRYIH---AAGIIHRDLKPGNLAVNEDCELKILDFGLA 175 (367)
T ss_dssp CCEEEEECC-SEEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred eEEEEEecC-CCCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---HCCccccCcCHHHEEEcCCCCEEEEeeecc
Confidence 469999999 78999998753 5899999999999999999999 779999999999999999999999999999
Q ss_pred ccccCCCCCcccccccccccccccccc-CCcCcccchhhHHHHHHHHHhCCCCCccccccCC--------CCCCcch---
Q 011005 356 RLLHADSSNRTLLAGTYGYIAPELAYT-MVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSS--------SSDPKIM--- 423 (496)
Q Consensus 356 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~--------~~~~~~~--- 423 (496)
+..... ....++|+.|+|||++.+ ..++.++||||+||++|||++|+.||........ ...+...
T Consensus 176 ~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~ 252 (367)
T 1cm8_A 176 RQADSE---MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQR 252 (367)
T ss_dssp EECCSS---CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHT
T ss_pred cccccc---cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHH
Confidence 875432 334578999999999887 6899999999999999999999999964321100 0000000
Q ss_pred -----hHhh---hcCCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCCC
Q 011005 424 -----LIDV---LDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTPL 480 (496)
Q Consensus 424 -----~~~~---~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~~ 480 (496)
.... +..................+.+|+.+||+.||++|||++|+++|+|+......
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~hp~f~~~~~~ 317 (367)
T 1cm8_A 253 LQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLHDT 317 (367)
T ss_dssp CSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC--
T ss_pred hhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcChHHHhhcCC
Confidence 0000 00000000000001112347799999999999999999999999999875443
No 140
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=1.4e-43 Score=337.99 Aligned_cols=254 Identities=18% Similarity=0.273 Sum_probs=202.8
Q ss_pred HHhCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccch-hHHHHHHHHHHHHHHHhh-cccccccccceeecCCeEEE
Q 011005 203 ATEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSE-ELAFIKSFKNEAQVLSQV-LHRNIVKLYGYCLHKKCMFL 279 (496)
Q Consensus 203 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~l 279 (496)
..++|++.+.||+|+||+||+|.+. +++.||+|.+.... .......+.+|+..+..+ +||||+++++++.+++..++
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~l 88 (289)
T 1x8b_A 9 YTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLI 88 (289)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEE
T ss_pred ccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEE
Confidence 4578999999999999999999775 79999999987642 223346788999999999 89999999999999999999
Q ss_pred EEEecCCCChhhhhhCCCC-CccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCC--------------
Q 011005 280 IYEYMERGSLFCNLHNNED-AVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSK-------------- 344 (496)
Q Consensus 280 V~e~~~~g~L~~~l~~~~~-~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~-------------- 344 (496)
||||+++++|.+++..... ...+++..++.++.||+.||+||| +.+|+||||||+||+++.+
T Consensus 89 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~ 165 (289)
T 1x8b_A 89 QNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIH---SMSLVHMDIKPSNIFISRTSIPNAASEEGDEDD 165 (289)
T ss_dssp EEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEC----------------
T ss_pred EEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHH---hCCEeecCCCHHHEEEcCCCCCccccccccccc
Confidence 9999999999999975421 125899999999999999999999 7799999999999999844
Q ss_pred -----CCeEEccccccccccCCCCCccccccccccccccccccC-CcCcccchhhHHHHHHHHHhCCCCCccccccCCCC
Q 011005 345 -----LEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYTM-VMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSS 418 (496)
Q Consensus 345 -----~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~ 418 (496)
..++|+|||.+....... ...||+.|+|||.+.+. .++.++||||||+++|+|++|..|+....
T Consensus 166 ~~~~~~~~kl~Dfg~~~~~~~~~----~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~------ 235 (289)
T 1x8b_A 166 WASNKVMFKIGDLGHVTRISSPQ----VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGD------ 235 (289)
T ss_dssp ----CCCEEECCCTTCEETTCSC----CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSH------
T ss_pred ccCCceEEEEcccccccccCCcc----ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchh------
Confidence 479999999998764332 34589999999999876 56689999999999999999998754211
Q ss_pred CCcchhHhhhcCCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhcc
Q 011005 419 DPKIMLIDVLDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRK 477 (496)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~ 477 (496)
..........+..... ....+.+++.+||+.||++|||+.|+++|+|+...
T Consensus 236 ----~~~~~~~~~~~~~~~~----~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~ 286 (289)
T 1x8b_A 236 ----QWHEIRQGRLPRIPQV----LSQEFTELLKVMIHPDPERRPSAMALVKHSVLLSA 286 (289)
T ss_dssp ----HHHHHHTTCCCCCSSC----CCHHHHHHHHHHTCSSGGGSCCHHHHHTCTTC---
T ss_pred ----HHHHHHcCCCCCCCcc----cCHHHHHHHHHHhCCCcccCCCHHHHhhChHhhhh
Confidence 1222222222211111 11247789999999999999999999999998764
No 141
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=9.7e-44 Score=346.11 Aligned_cols=258 Identities=17% Similarity=0.185 Sum_probs=205.0
Q ss_pred HhCCCCcceeeecCCeeEEEEEe-CCCcEEEEEEcccchhHHHHHHHHHHHHHHHhh-cccccccccceeecCCeEEEEE
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSEELAFIKSFKNEAQVLSQV-LHRNIVKLYGYCLHKKCMFLIY 281 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lV~ 281 (496)
.++|++.+.||+|+||+||+|.. .+++.||||.+..... .+.+.+|+.+++++ +||||+++++++..++..++||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~ 84 (330)
T 2izr_A 8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR---APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVL 84 (330)
T ss_dssp TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS---SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEE
T ss_pred cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc---hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEE
Confidence 36799999999999999999975 5789999999875432 13578999999999 8999999999999999999999
Q ss_pred EecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCC-----eEEccccccc
Q 011005 282 EYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLE-----AFVADFGTAR 356 (496)
Q Consensus 282 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~-----~kl~Dfg~~~ 356 (496)
||+ +++|.+++.... ..+++..++.++.|++.||+||| +.+|+||||||+|||++.++. +||+|||+++
T Consensus 85 e~~-~~~L~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~LH---~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~ 158 (330)
T 2izr_A 85 ELL-GPSLEDLFDLCD--RTFSLKTVLMIAIQLISRMEYVH---SKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAK 158 (330)
T ss_dssp ECC-CCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCE
T ss_pred EeC-CCCHHHHHHHcC--CCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeeeccCCCCCCceEEEEEcccce
Confidence 999 999999998642 26899999999999999999999 679999999999999998887 9999999998
Q ss_pred cccCCCCC-------ccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhc
Q 011005 357 LLHADSSN-------RTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLD 429 (496)
Q Consensus 357 ~~~~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 429 (496)
........ .....||+.|+|||++.+..++.++||||||+++|||++|+.||..... .........+..
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~----~~~~~~~~~i~~ 234 (330)
T 2izr_A 159 EYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKA----DTLKERYQKIGD 234 (330)
T ss_dssp ESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCC----SSHHHHHHHHHH
T ss_pred eeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCcccccc----ccHHHHHHHHHh
Confidence 76543321 2356799999999999999999999999999999999999999974321 111111111111
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHh
Q 011005 430 QRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLIT 475 (496)
Q Consensus 430 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~ 475 (496)
.....+........+ .+.+++.+||+.||.+||+++++++.+...
T Consensus 235 ~~~~~~~~~~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~ 279 (330)
T 2izr_A 235 TKRATPIEVLCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDL 279 (330)
T ss_dssp HHHHSCHHHHTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHH
T ss_pred hhccCCHHHHhccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHH
Confidence 111111110000112 688999999999999999999998876543
No 142
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=2.2e-43 Score=355.20 Aligned_cols=270 Identities=21% Similarity=0.270 Sum_probs=203.5
Q ss_pred HhCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchhHHHHHHHHHHHHHHHhhc------ccccccccceeecCCe
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVL------HRNIVKLYGYCLHKKC 276 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~------h~niv~~~~~~~~~~~ 276 (496)
..+|++.+.||+|+||+||+|.+. +++.||||++..... ....+.+|+.+++.++ |+||+++++++.....
T Consensus 96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~ 173 (429)
T 3kvw_A 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKR--FHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNH 173 (429)
T ss_dssp TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCHH--HHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTE
T ss_pred cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCccc--hHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCe
Confidence 457999999999999999999654 689999999976542 3356788999988884 6799999999999999
Q ss_pred EEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCC--eEEccccc
Q 011005 277 MFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLE--AFVADFGT 354 (496)
Q Consensus 277 ~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~--~kl~Dfg~ 354 (496)
.++||||+. ++|.+++..... ..+++..++.++.||+.||+||| +.+|+||||||+|||++.++. +||+|||+
T Consensus 174 ~~lv~e~~~-~~L~~~l~~~~~-~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlKp~NILl~~~~~~~vkL~DFG~ 248 (429)
T 3kvw_A 174 ICMTFELLS-MNLYELIKKNKF-QGFSLPLVRKFAHSILQCLDALH---KNRIIHCDLKPENILLKQQGRSGIKVIDFGS 248 (429)
T ss_dssp EEEEECCCC-CBHHHHHHHTTT-CCCCHHHHHHHHHHHHHHHHHHH---HHTEECSCCSGGGEEESSTTSCCEEECCCTT
T ss_pred EEEEEeccC-CCHHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEEccCCCcceEEeeccc
Confidence 999999996 699988876542 25899999999999999999999 679999999999999999887 99999999
Q ss_pred cccccCCCCCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCC--------CCCCcc----
Q 011005 355 ARLLHADSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSS--------SSDPKI---- 422 (496)
Q Consensus 355 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~--------~~~~~~---- 422 (496)
++..... ....+||+.|+|||++.+..++.++|||||||++|||++|+.||........ ......
T Consensus 249 a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~ 325 (429)
T 3kvw_A 249 SCYEHQR---VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDA 325 (429)
T ss_dssp CEETTCC---CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHT
T ss_pred ceecCCc---ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHh
Confidence 9765322 3345789999999999999999999999999999999999999864321000 000000
Q ss_pred --hhHhhhcC---------------------------CC-CCCCChhHHH-----HHHHHHHHHHhcccCCCCCCCCHHH
Q 011005 423 --MLIDVLDQ---------------------------RL-PPPVDRKVIR-----DILLISTVSFACLQSNPKSRPTMQS 467 (496)
Q Consensus 423 --~~~~~~~~---------------------------~~-~~~~~~~~~~-----~~~~l~~li~~cl~~dP~~Rps~~e 467 (496)
.....+.. .. ..+....... ....+.+|+.+||++||++|||++|
T Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dli~~~L~~dP~~Rpta~e 405 (429)
T 3kvw_A 326 SKRAKNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQ 405 (429)
T ss_dssp BTTHHHHBCTTSCBTTSCEECCCC--CEECCEECTTCCEECSTTCSCHHHHTTTCCCHHHHHHHHHHTCSSTTTSCCHHH
T ss_pred hhhhhhccCCCCCcccccccccccccccccccccchhhccCCccchhhHhhccccchHHHHHHHHHHCCCChhhCCCHHH
Confidence 00000000 00 0000010111 1234789999999999999999999
Q ss_pred HHHHHHHhccCCCCCc
Q 011005 468 VSQEFLITRKTPLVKH 483 (496)
Q Consensus 468 vl~~~~~~~~~~~~~~ 483 (496)
+++|+|+.+..+....
T Consensus 406 ~L~Hpw~~~~~~~~~~ 421 (429)
T 3kvw_A 406 ALRHPWLRRRLPKPPT 421 (429)
T ss_dssp HHTSTTTC--------
T ss_pred HhCChhhccCCCCCCc
Confidence 9999999987665443
No 143
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=8.3e-43 Score=344.87 Aligned_cols=263 Identities=23% Similarity=0.248 Sum_probs=197.0
Q ss_pred HhCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccch-hHHHHHHHHHHHHHHHhhcccccccccceeecCC------
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSE-ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKK------ 275 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~------ 275 (496)
.++|++.+.||+|+||.||+|... +++.||||++.... .....+.+.+|+.+++.++||||+++++++...+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 103 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 103 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence 368999999999999999999754 68999999987532 2344567889999999999999999999997654
Q ss_pred eEEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEcccccc
Q 011005 276 CMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTA 355 (496)
Q Consensus 276 ~~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~ 355 (496)
..++||||+++ +|.+.+.. .+++..+..++.||+.||.||| +.+|+||||||+||+++.++.+||+|||++
T Consensus 104 ~~~lv~e~~~~-~l~~~~~~-----~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a 174 (371)
T 2xrw_A 104 DVYIVMELMDA-NLCQVIQM-----ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLA 174 (371)
T ss_dssp EEEEEEECCSE-EHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCCCC-
T ss_pred ceEEEEEcCCC-CHHHHHhh-----ccCHHHHHHHHHHHHHHHHHHH---HCCeecccCCHHHEEEcCCCCEEEEEeecc
Confidence 78999999975 78887763 4789999999999999999999 679999999999999999999999999999
Q ss_pred ccccCCCCCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccC---------CCCCC------
Q 011005 356 RLLHADSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLS---------SSSDP------ 420 (496)
Q Consensus 356 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~---------~~~~~------ 420 (496)
+..... .......||+.|+|||++.+..++.++||||+|+++|+|++|+.||....... ....+
T Consensus 175 ~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 253 (371)
T 2xrw_A 175 RTAGTS-FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKL 253 (371)
T ss_dssp ----------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTS
T ss_pred cccccc-cccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHh
Confidence 866432 22334678999999999999999999999999999999999999996432110 00000
Q ss_pred cchhHhh---------------hcCCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhc
Q 011005 421 KIMLIDV---------------LDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITR 476 (496)
Q Consensus 421 ~~~~~~~---------------~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~ 476 (496)
....... ......+............+.+|+.+||+.||++|||++|+++|+|+..
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~ 324 (371)
T 2xrw_A 254 QPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINV 324 (371)
T ss_dssp CHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHT
T ss_pred hhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCCcchhh
Confidence 0000000 0000011111112233456889999999999999999999999999974
No 144
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=7.5e-43 Score=340.42 Aligned_cols=260 Identities=22% Similarity=0.355 Sum_probs=208.9
Q ss_pred HhCCCCcceeeecCCeeEEEEEeC--------CCcEEEEEEcccchhHHHHHHHHHHHHHHHhh-cccccccccceeecC
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLP--------NGKVFALKKLHTSEELAFIKSFKNEAQVLSQV-LHRNIVKLYGYCLHK 274 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~ 274 (496)
.++|++.+.||+|+||.||+|.+. +++.||+|.+.........+.+.+|+.+++++ +||||+++++++...
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 113 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 113 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccC
Confidence 468999999999999999999763 56789999998765555567889999999999 899999999999999
Q ss_pred CeEEEEEEecCCCChhhhhhCCCC-------------CccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEe
Q 011005 275 KCMFLIYEYMERGSLFCNLHNNED-------------AVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILL 341 (496)
Q Consensus 275 ~~~~lV~e~~~~g~L~~~l~~~~~-------------~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~ 341 (496)
+..++||||+++|+|.+++..... ...+++..++.++.||+.||.||| +.+|+||||||+||++
T Consensus 114 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll 190 (334)
T 2pvf_A 114 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLV 190 (334)
T ss_dssp SCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEE
T ss_pred CceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCccceEEE
Confidence 999999999999999999986542 124899999999999999999999 6799999999999999
Q ss_pred cCCCCeEEccccccccccCCCCC--ccccccccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccCCCC
Q 011005 342 NSKLEAFVADFGTARLLHADSSN--RTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSS 418 (496)
Q Consensus 342 ~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~ 418 (496)
+.++.+||+|||+++........ .....+++.|+|||++.+..++.++||||||+++|+|++ |+.||....
T Consensus 191 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~------ 264 (334)
T 2pvf_A 191 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP------ 264 (334)
T ss_dssp CTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCC------
T ss_pred cCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCC------
Confidence 99999999999999876543221 223456788999999999999999999999999999999 999986321
Q ss_pred CCcchhHhhhcCCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhcc
Q 011005 419 DPKIMLIDVLDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRK 477 (496)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~ 477 (496)
............... ... .....+.+++.+||+.||++|||+.|+++++.....
T Consensus 265 -~~~~~~~~~~~~~~~-~~~---~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~ 318 (334)
T 2pvf_A 265 -VEELFKLLKEGHRMD-KPA---NCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 318 (334)
T ss_dssp -HHHHHHHHHHTCCCC-CCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -HHHHHHHHhcCCCCC-CCc---cCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 111111222221111 111 112247789999999999999999999999876543
No 145
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=2.7e-43 Score=338.06 Aligned_cols=264 Identities=24% Similarity=0.294 Sum_probs=206.2
Q ss_pred hCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchh-HHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEE
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEE-LAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYE 282 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e 282 (496)
++|++.+.||+|+||.||+|..+ +++.||+|.+..... ......+.+|+.++++++||||+++++++..++..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 82 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEE
Confidence 57889999999999999999775 789999999876432 2223567899999999999999999999999999999999
Q ss_pred ecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCC
Q 011005 283 YMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADS 362 (496)
Q Consensus 283 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 362 (496)
|+. ++|.+++..... ..+++..+..++.|++.||.||| +.|++||||||+||+++.++.+||+|||++.......
T Consensus 83 ~~~-~~L~~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~ 157 (299)
T 2r3i_A 83 FLH-QDLKKFMDASAL-TGIPLPLIKSYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV 157 (299)
T ss_dssp CCS-EEHHHHHHHTTT-TCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCS
T ss_pred ccc-CCHHHHHHhhhc-cCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHeEEcCCCCEEECcchhhhhccCCc
Confidence 997 599998876532 25889999999999999999999 6799999999999999999999999999998775444
Q ss_pred CCccccccccccccccccccCC-cCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhc------------
Q 011005 363 SNRTLLAGTYGYIAPELAYTMV-MTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLD------------ 429 (496)
Q Consensus 363 ~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~------------ 429 (496)
.......+|+.|+|||.+.+.. ++.++||||||+++|+|++|+.||...... ........
T Consensus 158 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~-------~~~~~~~~~~~~~~~~~~~~ 230 (299)
T 2r3i_A 158 RTYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI-------DQLFRIFRTLGTPDEVVWPG 230 (299)
T ss_dssp BCTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-------HHHHHHHHHHCCCCTTTSTT
T ss_pred cccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHH-------HHHHHHHHHhCCCchhhhhH
Confidence 3444557899999999998765 789999999999999999999999643211 00000000
Q ss_pred --------CCCCCCCCh----hHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCCC
Q 011005 430 --------QRLPPPVDR----KVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTPL 480 (496)
Q Consensus 430 --------~~~~~~~~~----~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~~ 480 (496)
...+..... ........+.+++.+||+.||++|||+.|+++|+|+......
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~hp~~~~~~~~ 293 (299)
T 2r3i_A 231 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 293 (299)
T ss_dssp GGGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTCCCC
T ss_pred hhcCcccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcChhhhcCCCC
Confidence 000000000 000112347799999999999999999999999999765443
No 146
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=6.6e-43 Score=337.85 Aligned_cols=261 Identities=26% Similarity=0.383 Sum_probs=207.8
Q ss_pred HHhCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEE
Q 011005 203 ATEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIY 281 (496)
Q Consensus 203 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~ 281 (496)
..++|++.+.||+|+||.||+|.++ +|+.||+|.+..... .+.+.+|+.+++.++||||+++++++...+..++||
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~---~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 103 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESD---LQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVM 103 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTSC---CHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchHH---HHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEe
Confidence 4578999999999999999999765 589999999876432 356789999999999999999999999999999999
Q ss_pred EecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCC
Q 011005 282 EYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHAD 361 (496)
Q Consensus 282 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 361 (496)
||+++++|.+++.... ..+++..++.++.|++.||.||| +.+++|+||||+||+++.++.++|+|||++......
T Consensus 104 e~~~~~~L~~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~ 178 (314)
T 3com_A 104 EYCGAGSVSDIIRLRN--KTLTEDEIATILQSTLKGLEYLH---FMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDT 178 (314)
T ss_dssp ECCTTEEHHHHHHHHT--CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECBTT
T ss_pred ecCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHH---hCCCcCCCcCHHHEEECCCCCEEEeecccchhhhhh
Confidence 9999999999986322 26899999999999999999999 779999999999999999999999999999877554
Q ss_pred CCCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHH
Q 011005 362 SSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVI 441 (496)
Q Consensus 362 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (496)
........|++.|+|||.+.+..++.++||||||+++|+|++|+.||..... ............+.... ..
T Consensus 179 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-------~~~~~~~~~~~~~~~~~--~~ 249 (314)
T 3com_A 179 MAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHP-------MRAIFMIPTNPPPTFRK--PE 249 (314)
T ss_dssp BSCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCH-------HHHHHHHHHSCCCCCSS--GG
T ss_pred ccccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCCh-------HHHHHHHhcCCCcccCC--cc
Confidence 4444456789999999999999999999999999999999999999863221 11111111111111000 11
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCCC
Q 011005 442 RDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTPL 480 (496)
Q Consensus 442 ~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~~ 480 (496)
.....+.+++.+||+.||++|||+.++++|+|+......
T Consensus 250 ~~~~~l~~li~~~l~~dp~~Rpt~~~ll~~~~~~~~~~~ 288 (314)
T 3com_A 250 LWSDNFTDFVKQCLVKSPEQRATATQLLQHPFVRSAKGV 288 (314)
T ss_dssp GSCHHHHHHHHHHTCSCTTTSCCHHHHTTSHHHHTCCCG
T ss_pred cCCHHHHHHHHHHccCChhhCcCHHHHHhCHHHhcCCcc
Confidence 112357799999999999999999999999999876544
No 147
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=4e-43 Score=334.22 Aligned_cols=256 Identities=25% Similarity=0.430 Sum_probs=207.6
Q ss_pred HHhCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeec--------
Q 011005 203 ATEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLH-------- 273 (496)
Q Consensus 203 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-------- 273 (496)
..++|++.+.||+|+||.||+|.+. +++.||+|.+.... ..+.+|++++++++||||+++++++..
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 83 (284)
T 2a19_B 9 FGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN-----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETS 83 (284)
T ss_dssp HHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS-----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC----
T ss_pred hccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc-----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccc
Confidence 4578999999999999999999875 79999999997654 345789999999999999999998854
Q ss_pred --------CCeEEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCC
Q 011005 274 --------KKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKL 345 (496)
Q Consensus 274 --------~~~~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~ 345 (496)
....++||||+++|+|.+++.... ...+++..++.++.|++.||.||| +.+++||||||+||+++.++
T Consensus 84 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~ 159 (284)
T 2a19_B 84 SKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRR-GEKLDKVLALELFEQITKGVDYIH---SKKLINRDLKPSNIFLVDTK 159 (284)
T ss_dssp -----CCEEEEEEEEECCCCSCBHHHHHHHGG-GSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETT
T ss_pred cccccccCcceEEEEEeccCCCCHHHHHhhcc-CCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeccCCHHHEEEcCCC
Confidence 445899999999999999997542 236899999999999999999999 67999999999999999999
Q ss_pred CeEEccccccccccCCCCCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhH
Q 011005 346 EAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLI 425 (496)
Q Consensus 346 ~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~ 425 (496)
.+||+|||++....... ......|++.|+|||.+.+..++.++||||||+++|+|++|..|+.... ....
T Consensus 160 ~~kl~Dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~---------~~~~ 229 (284)
T 2a19_B 160 QVKIGDFGLVTSLKNDG-KRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETS---------KFFT 229 (284)
T ss_dssp EEEECCCTTCEESSCCS-CCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHH---------HHHH
T ss_pred CEEECcchhheeccccc-cccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHH---------HHHH
Confidence 99999999998765433 2334568999999999999999999999999999999999999875321 1112
Q ss_pred hhhcCCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCCCCCcc
Q 011005 426 DVLDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTPLVKHA 484 (496)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~~~~~~ 484 (496)
......++...+ ..+.+++.+||+.||++|||+.|++++++..++.+....+
T Consensus 230 ~~~~~~~~~~~~-------~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~~~~~~ 281 (284)
T 2a19_B 230 DLRDGIISDIFD-------KKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSPEKNER 281 (284)
T ss_dssp HHHTTCCCTTSC-------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC-------
T ss_pred HhhcccccccCC-------HHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhCCCcccc
Confidence 222222332222 2367899999999999999999999999999887765544
No 148
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=1.8e-43 Score=349.86 Aligned_cols=261 Identities=10% Similarity=0.023 Sum_probs=187.0
Q ss_pred hCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccch--hHHHHHHHHHHHHHHHhh--cccccccccc-------eee
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQV--LHRNIVKLYG-------YCL 272 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l--~h~niv~~~~-------~~~ 272 (496)
.+|.+.+.||+|+||+||+|.+. +++.||+|++.... .....+.+.+|+.+++.+ +||||++++. ++.
T Consensus 62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~ 141 (371)
T 3q60_A 62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVA 141 (371)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEE
T ss_pred eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhee
Confidence 45889999999999999999865 78999999998744 334456778887666666 5999887553 332
Q ss_pred cC-----------------CeEEEEEEecCCCChhhhhhCCCCCccCCHHHH------HHHHHHHHHHHHHHHhCCCCCe
Q 011005 273 HK-----------------KCMFLIYEYMERGSLFCNLHNNEDAVELDWAKR------VNIVKAMAHALAYLHHDCSPSI 329 (496)
Q Consensus 273 ~~-----------------~~~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~------~~i~~~i~~~l~~lh~~~~~~i 329 (496)
.. ...++||||++ |+|.+++..... .+++..+ ..++.||+.||+||| +++|
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~--~~~~~~~~~~~vk~~i~~qi~~aL~~LH---~~~i 215 (371)
T 3q60_A 142 VQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDF--VYVFRGDEGILALHILTAQLIRLAANLQ---SKGL 215 (371)
T ss_dssp ETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHH--SCCCCHHHHHHHHHHHHHHHHHHHHHHH---HTTE
T ss_pred cCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhcc--ccchhhhhhhhhHHHHHHHHHHHHHHHH---HCCC
Confidence 22 34899999998 899999986421 2344455 678899999999999 7799
Q ss_pred EEeCCCCCceEecCCCCeEEccccccccccCCCCCcccccccccccccccccc--CCcCcccchhhHHHHHHHHHhCCCC
Q 011005 330 IHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYT--MVMTEKCDVYSFGVVTLEVLMGKHP 407 (496)
Q Consensus 330 ~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwslG~il~el~~g~~p 407 (496)
+||||||+|||++.++.+||+|||+++.... ......+|+.|+|||++.+ ..++.++||||||+++|||++|+.|
T Consensus 216 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~P 292 (371)
T 3q60_A 216 VHGHFTPDNLFIMPDGRLMLGDVSALWKVGT---RGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLP 292 (371)
T ss_dssp EETTCSGGGEEECTTSCEEECCGGGEEETTC---EEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCS
T ss_pred ccCcCCHHHEEECCCCCEEEEecceeeecCC---CccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCC
Confidence 9999999999999999999999999986532 2224456799999999987 7899999999999999999999999
Q ss_pred CccccccCCCCCCcchhHhhhcCCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhcc
Q 011005 408 RDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRK 477 (496)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~ 477 (496)
|..........................+... .....+.+|+.+||+.||++|||+.|+++|+|+...
T Consensus 293 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~ 359 (371)
T 3q60_A 293 FGLVTPGIKGSWKRPSLRVPGTDSLAFGSCT---PLPDFVKTLIGRFLNFDRRRRLLPLEAMETPEFLQL 359 (371)
T ss_dssp TTBCCTTCTTCCCBCCTTSCCCCSCCCTTSS---CCCHHHHHHHHHHTCSSTTTCCCHHHHTTSHHHHHH
T ss_pred CCCcCcccccchhhhhhhhccccccchhhcc---CCCHHHHHHHHHHcCCChhhCCCHHHHhcCHHHHHH
Confidence 9754321111111100010001111111100 112347789999999999999999999999998754
No 149
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=5.7e-43 Score=339.70 Aligned_cols=264 Identities=23% Similarity=0.360 Sum_probs=190.6
Q ss_pred HHhCCCCcceeeecCCeeEEEEEeCCCc----EEEEEEcccch-hHHHHHHHHHHHHHHHhhcccccccccceeecCCeE
Q 011005 203 ATEDFDIRYCIGTGGYGSVYKAQLPNGK----VFALKKLHTSE-ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCM 277 (496)
Q Consensus 203 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~----~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 277 (496)
..++|++.+.||+|+||+||+|.+.... .||||.++... .....+.+.+|+.++++++||||+++++++......
T Consensus 21 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 100 (323)
T 3qup_A 21 PEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAK 100 (323)
T ss_dssp C---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC---
T ss_pred ChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccc
Confidence 3568999999999999999999875432 79999997643 233457789999999999999999999999877654
Q ss_pred ------EEEEEecCCCChhhhhhCCC---CCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeE
Q 011005 278 ------FLIYEYMERGSLFCNLHNNE---DAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAF 348 (496)
Q Consensus 278 ------~lV~e~~~~g~L~~~l~~~~---~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~k 348 (496)
++||||+++|+|.+++.... ....+++..++.++.|++.||+||| +.+|+||||||+||+++.++.+|
T Consensus 101 ~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH---~~~ivH~Dikp~NIli~~~~~~k 177 (323)
T 3qup_A 101 GRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLS---SRNFIHRDLAARNCMLAEDMTVC 177 (323)
T ss_dssp ----CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTSCEE
T ss_pred cCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHH---cCCcccCCCCcceEEEcCCCCEE
Confidence 99999999999999986432 2225899999999999999999999 67999999999999999999999
Q ss_pred EccccccccccCCCCC--ccccccccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccCCCCCCcchhH
Q 011005 349 VADFGTARLLHADSSN--RTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSSDPKIMLI 425 (496)
Q Consensus 349 l~Dfg~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~ 425 (496)
|+|||+++........ .....+++.|+|||.+.+..++.++||||||+++|+|++ |+.||.... ......
T Consensus 178 l~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~-------~~~~~~ 250 (323)
T 3qup_A 178 VADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIE-------NAEIYN 250 (323)
T ss_dssp ECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC-------GGGHHH
T ss_pred EeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccC-------hHHHHH
Confidence 9999999876443221 223456788999999999999999999999999999999 999986322 122222
Q ss_pred hhhcCCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCCC
Q 011005 426 DVLDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTPL 480 (496)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~~ 480 (496)
............. ....+.+++.+||+.||++|||+.++++.+...-..+.
T Consensus 251 ~~~~~~~~~~~~~----~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~ 301 (323)
T 3qup_A 251 YLIGGNRLKQPPE----CMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLS 301 (323)
T ss_dssp HHHTTCCCCCCTT----CCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC--
T ss_pred HHhcCCCCCCCCc----cCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhh
Confidence 2222221111111 12247799999999999999997777666655544443
No 150
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.1e-42 Score=335.01 Aligned_cols=254 Identities=31% Similarity=0.499 Sum_probs=198.2
Q ss_pred hCCCCcceeeecCCeeEEEEEeCCCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEec
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEYM 284 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~~ 284 (496)
++|++.+.||+|+||+||+|.+. ++.||+|.+.... ..+.+.+|+.++++++||||+++++++.+. .++||||+
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~---~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~--~~lv~e~~ 81 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESES---ERKAFIVELRQLSRVNHPNIVKLYGACLNP--VCLVMEYA 81 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSSTT---HHHHHHHHHHHHHHCCCTTBCCEEEBCTTT--TEEEEECC
T ss_pred hHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecChh---HHHHHHHHHHHHhcCCCCCcCeEEEEEcCC--cEEEEEcC
Confidence 57888999999999999999884 7889999997543 236788999999999999999999998744 68999999
Q ss_pred CCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCC-eEEccccccccccCCCC
Q 011005 285 ERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLE-AFVADFGTARLLHADSS 363 (496)
Q Consensus 285 ~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~-~kl~Dfg~~~~~~~~~~ 363 (496)
++|+|.+++........++...++.++.|++.||+|||+.+.++|+||||||+||+++.++. +||+|||++......
T Consensus 82 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~-- 159 (307)
T 2eva_A 82 EGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH-- 159 (307)
T ss_dssp TTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC---------
T ss_pred CCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc--
Confidence 99999999987665556889999999999999999999432279999999999999998886 799999999765432
Q ss_pred CccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhH-hhhcCCCCCCCChhHHH
Q 011005 364 NRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLI-DVLDQRLPPPVDRKVIR 442 (496)
Q Consensus 364 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 442 (496)
.....||+.|+|||++.+..++.++||||||+++|+|++|+.||..... ...... .......+. ....
T Consensus 160 -~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~------~~~~~~~~~~~~~~~~-~~~~--- 228 (307)
T 2eva_A 160 -MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGG------PAFRIMWAVHNGTRPP-LIKN--- 228 (307)
T ss_dssp ------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCS------SHHHHHHHHHTTCCCC-CBTT---
T ss_pred -cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCc------cHHHHHHHHhcCCCCC-cccc---
Confidence 2234689999999999999999999999999999999999999963221 111111 111111111 1111
Q ss_pred HHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhcc
Q 011005 443 DILLISTVSFACLQSNPKSRPTMQSVSQEFLITRK 477 (496)
Q Consensus 443 ~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~ 477 (496)
....+.+++.+||+.||++|||++|+++.+....+
T Consensus 229 ~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 263 (307)
T 2eva_A 229 LPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMR 263 (307)
T ss_dssp CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGG
T ss_pred cCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHH
Confidence 12247789999999999999999999999876543
No 151
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=6.7e-44 Score=341.66 Aligned_cols=265 Identities=26% Similarity=0.399 Sum_probs=203.1
Q ss_pred HhCCCCcceeeecCCeeEEEEEe-----CCCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecC--Ce
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQL-----PNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHK--KC 276 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~ 276 (496)
.++|++.+.||+|+||+||+|.+ .+++.||||++..... ...+.+.+|+.++++++||||+++++++... ..
T Consensus 9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 87 (295)
T 3ugc_A 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE-EHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN 87 (295)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCH-HHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTS
T ss_pred HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCH-HHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCc
Confidence 46799999999999999999974 3688999999976543 3446789999999999999999999998653 45
Q ss_pred EEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccc
Q 011005 277 MFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTAR 356 (496)
Q Consensus 277 ~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~ 356 (496)
.++||||+++|+|.+++.... ..+++..++.++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++
T Consensus 88 ~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~ 162 (295)
T 3ugc_A 88 LKLIMEYLPYGSLRDYLQKHK--ERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTK 162 (295)
T ss_dssp CEEEEECCTTCBHHHHHHHCG--GGCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCCSCC
T ss_pred eEEEEEeCCCCCHHHHHHhcc--cccCHHHHHHHHHHHHHHHHHHh---cCCcccCCCCHhhEEEcCCCeEEEccCcccc
Confidence 899999999999999998653 25899999999999999999999 7799999999999999999999999999998
Q ss_pred cccCCCC---CccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCcccccc-----CCCCCCcc---hhH
Q 011005 357 LLHADSS---NRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSL-----SSSSDPKI---MLI 425 (496)
Q Consensus 357 ~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~-----~~~~~~~~---~~~ 425 (496)
....... ......++..|+|||.+.+..++.++||||+|+++|+|++|..|+...... ........ ...
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (295)
T 3ugc_A 163 VLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI 242 (295)
T ss_dssp -------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHH
T ss_pred cccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHH
Confidence 7654322 122345677899999999999999999999999999999999997532210 00111100 111
Q ss_pred hhhcCCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhcc
Q 011005 426 DVLDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRK 477 (496)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~ 477 (496)
+........+... .....+.+++.+||+.||++|||+.|+++.+....+
T Consensus 243 ~~~~~~~~~~~~~---~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~ 291 (295)
T 3ugc_A 243 ELLKNNGRLPRPD---GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 291 (295)
T ss_dssp HHHHTTCCCCCCT---TCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHhccCcCCCCc---CcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHH
Confidence 1111111111111 112357789999999999999999999999876543
No 152
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=2.6e-43 Score=341.93 Aligned_cols=259 Identities=24% Similarity=0.318 Sum_probs=201.9
Q ss_pred HHhCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccch-------hHHHHHHHHHHHHHHHhhcccccccccceeecC
Q 011005 203 ATEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSE-------ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHK 274 (496)
Q Consensus 203 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-------~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~ 274 (496)
..++|.+.+.||+|+||.||+|.+. +++.||||.+.... .......+.+|+.++++++||||+++++++..+
T Consensus 8 l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 87 (322)
T 2ycf_A 8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE 87 (322)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESS
T ss_pred hhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCC
Confidence 4578999999999999999999764 68899999986532 112234578999999999999999999998766
Q ss_pred CeEEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCC---eEEcc
Q 011005 275 KCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLE---AFVAD 351 (496)
Q Consensus 275 ~~~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~---~kl~D 351 (496)
. .++||||+++++|.+++.... .+++..+..++.||+.||.||| +.+++||||||+||+++.++. +||+|
T Consensus 88 ~-~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~~~~kl~D 160 (322)
T 2ycf_A 88 D-YYIVLELMEGGELFDKVVGNK---RLKEATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITD 160 (322)
T ss_dssp S-EEEEEECCTTEETHHHHSTTC---CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSSSCCEEECC
T ss_pred c-eEEEEecCCCCcHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEEecCCCCCeEEEcc
Confidence 5 899999999999999887643 6899999999999999999999 779999999999999987654 99999
Q ss_pred ccccccccCCCCCccccccccccccccccc---cCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhh
Q 011005 352 FGTARLLHADSSNRTLLAGTYGYIAPELAY---TMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVL 428 (496)
Q Consensus 352 fg~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~ 428 (496)
||+++..... .......||+.|+|||++. ...++.++||||||+++|+|++|+.||..... .........
T Consensus 161 fg~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~------~~~~~~~~~ 233 (322)
T 2ycf_A 161 FGHSKILGET-SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT------QVSLKDQIT 233 (322)
T ss_dssp CTTCEECCCC-HHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTC------SSCHHHHHH
T ss_pred Cccceecccc-cccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccch------HHHHHHHHH
Confidence 9999876432 1223456899999999974 56788999999999999999999999963221 111111222
Q ss_pred cCCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhc
Q 011005 429 DQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITR 476 (496)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~ 476 (496)
...... ...........+.+++.+||+.||++|||+.|+++|+|+..
T Consensus 234 ~~~~~~-~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~h~~~~~ 280 (322)
T 2ycf_A 234 SGKYNF-IPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 280 (322)
T ss_dssp HTCCCC-CHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGCC
T ss_pred hCcccc-CchhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhhCcCcCC
Confidence 222211 11111112335789999999999999999999999999854
No 153
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=2.2e-43 Score=342.84 Aligned_cols=256 Identities=23% Similarity=0.356 Sum_probs=200.1
Q ss_pred hCCCCcceeeecCCeeEEEEEeC-CCcE----EEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEE
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLP-NGKV----FALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFL 279 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~----vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 279 (496)
++|++.+.||+|+||+||+|.+. +++. ||+|.+...........+.+|+.+++.++||||+++++++. ....++
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~ 91 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQL 91 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEE
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEE
Confidence 57889999999999999999764 3443 78888765443333355678999999999999999999986 456889
Q ss_pred EEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEcccccccccc
Q 011005 280 IYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLH 359 (496)
Q Consensus 280 V~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 359 (496)
||||+.+|+|.+++.... ..+++..++.++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+++...
T Consensus 92 v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~ 166 (325)
T 3kex_A 92 VTQYLPLGSLLDHVRQHR--GALGPQLLLNWGVQIAKGMYYLE---EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLP 166 (325)
T ss_dssp EEECCTTCBSHHHHHSSG--GGSCTTHHHHHHHHHHHHHHHHH---HTTCCCSCCSSTTEEESSSSCEEECSCSGGGGSC
T ss_pred EEEeCCCCCHHHHHHHcc--ccCCHHHHHHHHHHHHHHHHHHH---hCCCCCCccchheEEECCCCeEEECCCCcccccC
Confidence 999999999999998642 36888999999999999999999 6799999999999999999999999999998875
Q ss_pred CCCCC--ccccccccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccCCCCCCcchhHhhhcCCCCCCC
Q 011005 360 ADSSN--RTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPV 436 (496)
Q Consensus 360 ~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (496)
..... .....+++.|+|||++.+..++.++||||||+++|+|++ |+.||.... ... ....+........
T Consensus 167 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~-------~~~-~~~~~~~~~~~~~ 238 (325)
T 3kex_A 167 PDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLR-------LAE-VPDLLEKGERLAQ 238 (325)
T ss_dssp CCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSC-------TTH-HHHHHHTTCBCCC
T ss_pred cccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccC-------HHH-HHHHHHcCCCCCC
Confidence 43322 234567889999999999999999999999999999999 999996322 111 1111111111111
Q ss_pred ChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhcc
Q 011005 437 DRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRK 477 (496)
Q Consensus 437 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~ 477 (496)
... ....+.+++.+||+.||++|||+.|+++++....+
T Consensus 239 ~~~---~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~ 276 (325)
T 3kex_A 239 PQI---CTIDVYMVMVKCWMIDENIRPTFKELANEFTRMAR 276 (325)
T ss_dssp CTT---BCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTT
T ss_pred CCc---CcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 000 11136688999999999999999999999876644
No 154
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=4.9e-43 Score=340.57 Aligned_cols=260 Identities=25% Similarity=0.395 Sum_probs=201.2
Q ss_pred HHhCCCCcceeeecCCeeEEEEEe-CCCcEEEEEEcccchhHHHHHHHHHHHHHHHhh-cccccccccceeec------C
Q 011005 203 ATEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSEELAFIKSFKNEAQVLSQV-LHRNIVKLYGYCLH------K 274 (496)
Q Consensus 203 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~------~ 274 (496)
..++|++.+.||+|+||.||+|.+ .+++.||+|.+...... ...+.+|+.+++++ +||||+++++++.. .
T Consensus 22 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~--~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~ 99 (326)
T 2x7f_A 22 PAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDE--EEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMD 99 (326)
T ss_dssp CTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSST--THHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCC
T ss_pred CCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCccc--HHHHHHHHHHHHhccCCCCeeeeeeEEeeccCcccc
Confidence 467899999999999999999976 47899999998754322 25688999999999 79999999999976 4
Q ss_pred CeEEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccc
Q 011005 275 KCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGT 354 (496)
Q Consensus 275 ~~~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~ 354 (496)
...++||||+++|+|.+++.... ...++...++.++.||+.||.||| ..+++||||||+||+++.++.+||+|||+
T Consensus 100 ~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~ 175 (326)
T 2x7f_A 100 DQLWLVMEFCGAGSVTDLIKNTK-GNTLKEEWIAYICREILRGLSHLH---QHKVIHRDIKGQNVLLTENAEVKLVDFGV 175 (326)
T ss_dssp CEEEEEEECCTTEEHHHHHHHSG-GGCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTCCEEECCCTT
T ss_pred ceEEEEEEcCCCCcHHHHHHhcc-cCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCcHHHEEEcCCCCEEEeeCcC
Confidence 67899999999999999998643 236899999999999999999999 67999999999999999999999999999
Q ss_pred cccccCCCCCccccccccccccccccc-----cCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhc
Q 011005 355 ARLLHADSSNRTLLAGTYGYIAPELAY-----TMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLD 429 (496)
Q Consensus 355 ~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 429 (496)
+..............|++.|+|||++. +..++.++||||||+++|+|++|+.||..... .........
T Consensus 176 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-------~~~~~~~~~ 248 (326)
T 2x7f_A 176 SAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHP-------MRALFLIPR 248 (326)
T ss_dssp TC-------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCH-------HHHHHHHHH
T ss_pred ceecCcCccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcH-------HHHHHHhhc
Confidence 987654433344567899999999987 56788999999999999999999999863221 111111212
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccC
Q 011005 430 QRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKT 478 (496)
Q Consensus 430 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~ 478 (496)
...+...... ....+.+++.+||+.||++|||+.|+++|+|+....
T Consensus 249 ~~~~~~~~~~---~~~~l~~li~~~l~~dp~~Rps~~~ll~hp~~~~~~ 294 (326)
T 2x7f_A 249 NPAPRLKSKK---WSKKFQSFIESCLVKNHSQRPATEQLMKHPFIRDQP 294 (326)
T ss_dssp SCCCCCSCSC---SCHHHHHHHHHHCCSSGGGSCCHHHHHTSHHHHCCT
T ss_pred CccccCCccc---cCHHHHHHHHHHhccChhhCCCHHHHhhChHHhhCc
Confidence 2111111110 112477899999999999999999999999997653
No 155
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=1e-42 Score=342.15 Aligned_cols=279 Identities=21% Similarity=0.277 Sum_probs=211.7
Q ss_pred HhCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecC-----CeE
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHK-----KCM 277 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~-----~~~ 277 (496)
.++|.+.+.||+|+||.||+|.+. +|+.||||.+...........+.+|+.++++++||||+++++++... ...
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 89 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV 89 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCE
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceE
Confidence 468999999999999999999765 68999999997655555557788999999999999999999988654 678
Q ss_pred EEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEcccccccc
Q 011005 278 FLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARL 357 (496)
Q Consensus 278 ~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 357 (496)
++||||+. |+|.+++... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.
T Consensus 90 ~lv~e~~~-~~L~~~~~~~----~~~~~~~~~~~~qi~~~L~~LH---~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~ 161 (353)
T 2b9h_A 90 YIIQELMQ-TDLHRVISTQ----MLSDDHIQYFIYQTLRAVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARI 161 (353)
T ss_dssp EEEECCCS-EEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEEeccC-ccHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEEcCCCcEEEEecccccc
Confidence 99999997 5898888753 5899999999999999999999 77999999999999999999999999999987
Q ss_pred ccCCCCC----------cccccccccccccccccc-CCcCcccchhhHHHHHHHHHhCCCCCccccccC----------C
Q 011005 358 LHADSSN----------RTLLAGTYGYIAPELAYT-MVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLS----------S 416 (496)
Q Consensus 358 ~~~~~~~----------~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~----------~ 416 (496)
....... .....||+.|+|||++.+ ..++.++||||+|+++|+|++|+.||....... .
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~ 241 (353)
T 2b9h_A 162 IDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGT 241 (353)
T ss_dssp CC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCC
T ss_pred cccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCC
Confidence 6432211 122468999999998764 678999999999999999999999996432100 0
Q ss_pred -------CCCCcchhHhhhcCCCCCCC---ChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCCCCCcccc
Q 011005 417 -------SSDPKIMLIDVLDQRLPPPV---DRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTPLVKHAAI 486 (496)
Q Consensus 417 -------~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~~~~~~~~ 486 (496)
.........+........+. ..........+.+++.+||+.||++|||++|+++|+|+............
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~~~~~~~~ 321 (353)
T 2b9h_A 242 PHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTYHDPNDEPEG 321 (353)
T ss_dssp CCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTCCTTSSCCC
T ss_pred CchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcCccccccCCccccccc
Confidence 00000001111111100000 00001122357799999999999999999999999999887665555444
Q ss_pred cccc
Q 011005 487 QDIS 490 (496)
Q Consensus 487 ~~i~ 490 (496)
+.++
T Consensus 322 ~~~~ 325 (353)
T 2b9h_A 322 EPIP 325 (353)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 4444
No 156
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=6.9e-44 Score=347.68 Aligned_cols=261 Identities=24% Similarity=0.360 Sum_probs=208.9
Q ss_pred HHhCCCCcceeeecCCeeEEEEEeCC------CcEEEEEEcccchhHHHHHHHHHHHHHHHhh-cccccccccceeecCC
Q 011005 203 ATEDFDIRYCIGTGGYGSVYKAQLPN------GKVFALKKLHTSEELAFIKSFKNEAQVLSQV-LHRNIVKLYGYCLHKK 275 (496)
Q Consensus 203 ~~~~~~~~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~ 275 (496)
..++|.+.+.||+|+||.||+|.+.. ...||+|.+.........+.+.+|+.+++++ +||||+++++++...+
T Consensus 44 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 123 (333)
T 2i1m_A 44 PRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGG 123 (333)
T ss_dssp CTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred CHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCC
Confidence 35789999999999999999997642 3479999998765555567889999999999 8999999999999999
Q ss_pred eEEEEEEecCCCChhhhhhCCC-----------CCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCC
Q 011005 276 CMFLIYEYMERGSLFCNLHNNE-----------DAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSK 344 (496)
Q Consensus 276 ~~~lV~e~~~~g~L~~~l~~~~-----------~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~ 344 (496)
..++||||+++|+|.+++.... ....+++..++.++.|++.||+||| +.+|+||||||+||+++.+
T Consensus 124 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~NIl~~~~ 200 (333)
T 2i1m_A 124 PVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLA---SKNCIHRDVAARNVLLTNG 200 (333)
T ss_dssp SCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGCEEEGG
T ss_pred ceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHh---cCCcccCCcccceEEECCC
Confidence 9999999999999999987532 1235799999999999999999999 6799999999999999999
Q ss_pred CCeEEccccccccccCCCCC--ccccccccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccCCCCCCc
Q 011005 345 LEAFVADFGTARLLHADSSN--RTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSSDPK 421 (496)
Q Consensus 345 ~~~kl~Dfg~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~~~~ 421 (496)
+.+||+|||+++........ .....+|+.|+|||.+.+..++.++||||||+++|+|++ |..||.... ..
T Consensus 201 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~-------~~ 273 (333)
T 2i1m_A 201 HVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGIL-------VN 273 (333)
T ss_dssp GEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC-------SS
T ss_pred CeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccc-------hh
Confidence 99999999999876543322 223456789999999999999999999999999999998 999986321 11
Q ss_pred chhHhhhcCCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhc
Q 011005 422 IMLIDVLDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITR 476 (496)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~ 476 (496)
.................. ....+.+++.+||+.||++|||+.|+++++....
T Consensus 274 ~~~~~~~~~~~~~~~~~~---~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~ 325 (333)
T 2i1m_A 274 SKFYKLVKDGYQMAQPAF---APKNIYSIMQACWALEPTHRPTFQQICSFLQEQA 325 (333)
T ss_dssp HHHHHHHHHTCCCCCCTT---CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCCCCCCC---CCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHH
Confidence 122222222211111111 1234778999999999999999999999886543
No 157
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=6.4e-43 Score=344.92 Aligned_cols=260 Identities=24% Similarity=0.304 Sum_probs=206.1
Q ss_pred HhCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecC-----CeE
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHK-----KCM 277 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~-----~~~ 277 (496)
.++|++.+.||+|+||.||+|... +++.||+|++.........+.+.+|++++++++||||+++++++... ...
T Consensus 26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 105 (364)
T 3qyz_A 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV 105 (364)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceE
Confidence 468999999999999999999764 68899999998655555567889999999999999999999999765 368
Q ss_pred EEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEcccccccc
Q 011005 278 FLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARL 357 (496)
Q Consensus 278 ~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 357 (496)
++||||++ |+|.+++... .+++..+..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++.
T Consensus 106 ~iv~e~~~-~~L~~~l~~~----~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~ 177 (364)
T 3qyz_A 106 YIVQDLME-TDLYKLLKTQ----HLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARV 177 (364)
T ss_dssp EEEEECCS-EEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEEcccC-cCHHHHHHhC----CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCChHhEEECCCCCEEEEeCcceEe
Confidence 99999997 5899888753 5899999999999999999999 77999999999999999999999999999987
Q ss_pred ccCCCCC---cccccccccccccccccc-CCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhc----
Q 011005 358 LHADSSN---RTLLAGTYGYIAPELAYT-MVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLD---- 429 (496)
Q Consensus 358 ~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~---- 429 (496)
....... ....+||+.|+|||++.+ ..++.++||||+|+++|+|++|+.||...... .....+..
T Consensus 178 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-------~~~~~i~~~~~~ 250 (364)
T 3qyz_A 178 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL-------DQLNHILGILGS 250 (364)
T ss_dssp CCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGG-------GHHHHHHHHHCS
T ss_pred cCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChH-------HHHHHHHHHhCC
Confidence 6433221 234579999999998764 45899999999999999999999999643211 11111000
Q ss_pred ------------------CCCCCCC----ChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccC
Q 011005 430 ------------------QRLPPPV----DRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKT 478 (496)
Q Consensus 430 ------------------~~~~~~~----~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~ 478 (496)
...+... ..........+.+|+.+||+.||++|||+.|+++|+|+....
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~ 321 (364)
T 3qyz_A 251 PSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYY 321 (364)
T ss_dssp CCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTTC
T ss_pred CCHHHHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhhcc
Confidence 0000000 000001123477999999999999999999999999998753
No 158
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.4e-42 Score=331.13 Aligned_cols=255 Identities=24% Similarity=0.341 Sum_probs=205.1
Q ss_pred hCCCCcc-eeeecCCeeEEEEEeC---CCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEE
Q 011005 205 EDFDIRY-CIGTGGYGSVYKAQLP---NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLI 280 (496)
Q Consensus 205 ~~~~~~~-~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV 280 (496)
++|.+.+ .||+|+||.||+|.+. ++..||+|.++........+.+.+|+.++++++||||+++++++ ..+..++|
T Consensus 9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv 87 (287)
T 1u59_A 9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLV 87 (287)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEE
T ss_pred HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEE
Confidence 4566666 8999999999999753 57889999998765555567899999999999999999999999 45568999
Q ss_pred EEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccC
Q 011005 281 YEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHA 360 (496)
Q Consensus 281 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 360 (496)
|||+++++|.+++.... ..+++..++.++.|++.||.||| +.+++||||||+||+++.++.++|+|||++.....
T Consensus 88 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~ 162 (287)
T 1u59_A 88 MEMAGGGPLHKFLVGKR--EEIPVSNVAELLHQVSMGMKYLE---EKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGA 162 (287)
T ss_dssp EECCTTEEHHHHHTTCT--TTSCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEEETTEEEECCCTTCEECTT
T ss_pred EEeCCCCCHHHHHHhCC--ccCCHHHHHHHHHHHHHHHHHHH---HCCEeeCCCchheEEEcCCCCEEECcccceeeecc
Confidence 99999999999997543 36899999999999999999999 77999999999999999999999999999987654
Q ss_pred CCCC---ccccccccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccCCCCCCcchhHhhhcCCCCCCC
Q 011005 361 DSSN---RTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPV 436 (496)
Q Consensus 361 ~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (496)
.... .....+|+.|+|||++.+..++.++||||+|+++|+|++ |+.||.... .............. ..
T Consensus 163 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~-------~~~~~~~i~~~~~~-~~ 234 (287)
T 1u59_A 163 DDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMK-------GPEVMAFIEQGKRM-EC 234 (287)
T ss_dssp CSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCC-------THHHHHHHHTTCCC-CC
T ss_pred CcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCC-------HHHHHHHHhcCCcC-CC
Confidence 3321 222346789999999998899999999999999999998 999986322 11112222221111 11
Q ss_pred ChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhc
Q 011005 437 DRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITR 476 (496)
Q Consensus 437 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~ 476 (496)
.. .....+.+++.+||+.||++|||+.|++++++...
T Consensus 235 ~~---~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~ 271 (287)
T 1u59_A 235 PP---ECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACY 271 (287)
T ss_dssp CT---TCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CC---CcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 11 11235778999999999999999999999987653
No 159
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=4.1e-43 Score=371.15 Aligned_cols=255 Identities=21% Similarity=0.330 Sum_probs=214.7
Q ss_pred HhCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccch--hHHHHHHHHHHHHHHHhh-cccccccccceeecCCeEEE
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQV-LHRNIVKLYGYCLHKKCMFL 279 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~l 279 (496)
.++|++.+.||+|+||.||+|.++ +++.||||+++... .......+..|..++..+ +||+|+++++++.+.+..++
T Consensus 340 ~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~l 419 (674)
T 3pfq_A 340 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYF 419 (674)
T ss_dssp CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEE
T ss_pred ccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEE
Confidence 468999999999999999999765 68899999997642 223345678899999988 69999999999999999999
Q ss_pred EEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEcccccccccc
Q 011005 280 IYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLH 359 (496)
Q Consensus 280 V~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 359 (496)
||||++||+|.+++.... .+++..++.++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+++...
T Consensus 420 V~E~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH---~~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~ 493 (674)
T 3pfq_A 420 VMEYVNGGDLMYHIQQVG---RFKEPHAVFYAAEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENI 493 (674)
T ss_dssp EEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHH---HTSEECCCCCSTTEEECSSSCEEECCCTTCEECC
T ss_pred EEeCcCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---hCCeEeccCChhhEEEcCCCcEEEeecceeeccc
Confidence 999999999999998654 6899999999999999999999 7799999999999999999999999999998755
Q ss_pred CCCCCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChh
Q 011005 360 ADSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRK 439 (496)
Q Consensus 360 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 439 (496)
.........+||+.|+|||++.+..++.++||||||+++|||++|+.||... ........+.......+..
T Consensus 494 ~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~-------~~~~~~~~i~~~~~~~p~~-- 564 (674)
T 3pfq_A 494 WDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGE-------DEDELFQSIMEHNVAYPKS-- 564 (674)
T ss_dssp CTTCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCS-------SHHHHHHHHHSSCCCCCTT--
T ss_pred cCCcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCC-------CHHHHHHHHHhCCCCCCcc--
Confidence 5555556678999999999999999999999999999999999999999632 2233344444443332221
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCCH-----HHHHHHHHHhc
Q 011005 440 VIRDILLISTVSFACLQSNPKSRPTM-----QSVSQEFLITR 476 (496)
Q Consensus 440 ~~~~~~~l~~li~~cl~~dP~~Rps~-----~evl~~~~~~~ 476 (496)
....+.+|+.+||+.||++||++ +|+++|+|+..
T Consensus 565 ---~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~h~ff~~ 603 (674)
T 3pfq_A 565 ---MSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRY 603 (674)
T ss_dssp ---SCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHSSGGGSS
T ss_pred ---CCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhcCccccC
Confidence 12246789999999999999998 99999999864
No 160
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=2.2e-43 Score=346.59 Aligned_cols=272 Identities=22% Similarity=0.284 Sum_probs=205.0
Q ss_pred HhCCCCcceeeecCCeeEEEEEe-CCCcEEEEEEcccchh-HHHHHHHHHHHHHHHhhcccccccccceeec--------
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSEE-LAFIKSFKNEAQVLSQVLHRNIVKLYGYCLH-------- 273 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-------- 273 (496)
.++|++.+.||+|+||+||+|.+ .+|+.||+|++..... ......+.+|+.+++.++||||+++++++..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 95 (351)
T 3mi9_A 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC 95 (351)
T ss_dssp GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-------
T ss_pred ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccC
Confidence 36899999999999999999976 5789999999865432 2223567899999999999999999999877
Q ss_pred CCeEEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEcccc
Q 011005 274 KKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFG 353 (496)
Q Consensus 274 ~~~~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg 353 (496)
.+..++||||+++ +|.+.+.... ..+++..++.++.||+.||+||| +.||+||||||+||+++.++.+||+|||
T Consensus 96 ~~~~~lv~e~~~~-~l~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg 169 (351)
T 3mi9_A 96 KGSIYLVFDFCEH-DLAGLLSNVL--VKFTLSEIKRVMQMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFG 169 (351)
T ss_dssp -CEEEEEEECCSE-EHHHHHHCTT--SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCT
T ss_pred CceEEEEEeccCC-CHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCHHHEEEcCCCCEEEccch
Confidence 3468999999985 7777776543 25899999999999999999999 7799999999999999999999999999
Q ss_pred ccccccCCC----CCcccccccccccccccccc-CCcCcccchhhHHHHHHHHHhCCCCCcccccc-------------C
Q 011005 354 TARLLHADS----SNRTLLAGTYGYIAPELAYT-MVMTEKCDVYSFGVVTLEVLMGKHPRDILSSL-------------S 415 (496)
Q Consensus 354 ~~~~~~~~~----~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~el~~g~~p~~~~~~~-------------~ 415 (496)
+++.+.... .......||+.|+|||++.+ ..++.++||||+|+++|+|++|+.||...... .
T Consensus 170 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~ 249 (351)
T 3mi9_A 170 LARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSIT 249 (351)
T ss_dssp TCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCC
T ss_pred hcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCC
Confidence 998764322 22344578999999999876 45899999999999999999999998643210 0
Q ss_pred CCCCCcchhHhhhcCC-CCCCCChhHHH------HHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCCCC
Q 011005 416 SSSDPKIMLIDVLDQR-LPPPVDRKVIR------DILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTPLV 481 (496)
Q Consensus 416 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~------~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~~~ 481 (496)
....+........... ........... ....+.+|+.+||+.||++|||++|+++|+|+.......
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~~~ 322 (351)
T 3mi9_A 250 PEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWSDPMPS 322 (351)
T ss_dssp TTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGSSSCCC
T ss_pred hhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCCCCcCCCCCcc
Confidence 0000000000000000 00000000000 123477999999999999999999999999998654443
No 161
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=4.7e-43 Score=335.82 Aligned_cols=277 Identities=16% Similarity=0.229 Sum_probs=206.6
Q ss_pred HHhCCCCcceeeecCCeeEEEEEe-CCCcEEEEEEcccchhHHHHHHHHHHHHHHHhhccccccccccee-ecCCeEEEE
Q 011005 203 ATEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYC-LHKKCMFLI 280 (496)
Q Consensus 203 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~-~~~~~~~lV 280 (496)
..++|++.+.||+|+||+||+|.+ .+++.||+|++...... ..+.+|+.+++.++|++++..+..+ ......++|
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv 83 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH---PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMV 83 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC---C---CCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEE
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccccc---hHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEE
Confidence 467899999999999999999975 57899999987654322 3578899999999988877776655 567788999
Q ss_pred EEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEe---cCCCCeEEcccccccc
Q 011005 281 YEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILL---NSKLEAFVADFGTARL 357 (496)
Q Consensus 281 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~---~~~~~~kl~Dfg~~~~ 357 (496)
|||+ +++|.+++..... .+++..++.++.|++.||.||| +.+|+||||||+||++ +.++.+||+|||+++.
T Consensus 84 ~e~~-~~~L~~~~~~~~~--~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~ 157 (296)
T 4hgt_A 84 MELL-GPSLEDLFNFCSR--KFSLKTVLLLADQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKK 157 (296)
T ss_dssp EECC-CCBHHHHHHHTTS--CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECCGGGTTCEEECCCTTCEE
T ss_pred EEcc-CCCHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeeeeccCCCCeEEEecCcccee
Confidence 9999 9999999975332 5899999999999999999999 7799999999999999 7889999999999987
Q ss_pred ccCCCC-------CccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcC
Q 011005 358 LHADSS-------NRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQ 430 (496)
Q Consensus 358 ~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 430 (496)
...... ......||+.|+|||.+.+..++.++||||+|+++|+|++|+.||....... ...........
T Consensus 158 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~----~~~~~~~~~~~ 233 (296)
T 4hgt_A 158 YRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAAT----KRQKYERISEK 233 (296)
T ss_dssp CBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSS----SSSHHHHHHHH
T ss_pred ccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhh----hhhhhhhhhcc
Confidence 654332 1234578999999999999999999999999999999999999997533211 11111111111
Q ss_pred CCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCCCCCcccccccchhhh
Q 011005 431 RLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTPLVKHAAIQDISISEL 494 (496)
Q Consensus 431 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~~~~~~~~~~i~~~~~ 494 (496)
....+...........+.+++.+||+.||++|||++++++.+........ ......++|+.+
T Consensus 234 ~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~~--~~~~~~~dw~~~ 295 (296)
T 4hgt_A 234 KMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQG--FSYDYVFDWNML 295 (296)
T ss_dssp HHHSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHHT--CCTTCCCGGGGC
T ss_pred cccchhhhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhC--CCccCccchhhc
Confidence 11111100001112357899999999999999999999988766554322 222333445554
No 162
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=9e-43 Score=329.38 Aligned_cols=253 Identities=19% Similarity=0.294 Sum_probs=204.4
Q ss_pred HhCCCCcceeeecCCeeEEEEEeCCCcEEEEEEcccch-hHHHHHHHHHHHHHHHhhcccccccccceeecC--CeEEEE
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSE-ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHK--KCMFLI 280 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~lV 280 (496)
.++|.+.+.||+|+||+||+|.++ ++.||+|++.... .....+.+.+|+.++++++||||+++++++... ...++|
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 87 (271)
T 3kmu_A 9 FKQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLI 87 (271)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEE
T ss_pred HHHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEee
Confidence 367999999999999999999985 8899999997653 334456789999999999999999999999887 778999
Q ss_pred EEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCC--eEEeCCCCCceEecCCCCeEEccccccccc
Q 011005 281 YEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPS--IIHRDISSNNILLNSKLEAFVADFGTARLL 358 (496)
Q Consensus 281 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~--i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 358 (496)
|||+++|+|.+++..... ..+++..++.++.|++.||+||| +.+ ++||||||+||+++.++.++++|||++...
T Consensus 88 ~e~~~~~~L~~~l~~~~~-~~~~~~~~~~i~~qi~~~l~~lH---~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~ 163 (271)
T 3kmu_A 88 THWMPYGSLYNVLHEGTN-FVVDQSQAVKFALDMARGMAFLH---TLEPLIPRHALNSRSVMIDEDMTARISMADVKFSF 163 (271)
T ss_dssp EECCTTCBHHHHHHSCSS-CCCCHHHHHHHHHHHHHHHHHHT---TSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTT
T ss_pred ecccCCCcHHHHHhhccc-CCCCHHHHHHHHHHHHHHHHHHh---cCCCceecCCCccceEEEcCCcceeEEeccceeee
Confidence 999999999999987532 25899999999999999999999 667 999999999999999999999999887543
Q ss_pred cCCCCCccccccccccccccccccCCcCc---ccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCC
Q 011005 359 HADSSNRTLLAGTYGYIAPELAYTMVMTE---KCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPP 435 (496)
Q Consensus 359 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~---~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (496)
.. ....||+.|+|||.+.+..++. ++||||+|+++|+|++|+.||.... ................
T Consensus 164 ~~-----~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~-------~~~~~~~~~~~~~~~~ 231 (271)
T 3kmu_A 164 QS-----PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLS-------NMEIGMKVALEGLRPT 231 (271)
T ss_dssp SC-----TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSC-------HHHHHHHHHHSCCCCC
T ss_pred cc-----cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccC-------hHHHHHHHHhcCCCCC
Confidence 22 2346899999999998766554 7999999999999999999996322 1112222222222221
Q ss_pred CChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhc
Q 011005 436 VDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITR 476 (496)
Q Consensus 436 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~ 476 (496)
.... ....+.+++.+||+.||++|||++|+++.+....
T Consensus 232 ~~~~---~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~ 269 (271)
T 3kmu_A 232 IPPG---ISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQ 269 (271)
T ss_dssp CCTT---CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC
T ss_pred CCCC---CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhh
Confidence 1111 1224778999999999999999999999987654
No 163
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=1e-43 Score=344.79 Aligned_cols=263 Identities=24% Similarity=0.334 Sum_probs=211.7
Q ss_pred HHHHhCCCCcceeeecCCeeEEEEEeC------CCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecC
Q 011005 201 IEATEDFDIRYCIGTGGYGSVYKAQLP------NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHK 274 (496)
Q Consensus 201 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~ 274 (496)
....++|++.+.||+|+||.||+|.+. .++.||+|.+...........+.+|+.+++.++||||+++++++..+
T Consensus 21 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 100 (322)
T 1p4o_A 21 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQG 100 (322)
T ss_dssp BCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSS
T ss_pred cchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccC
Confidence 335678999999999999999999754 37789999998765555556789999999999999999999999999
Q ss_pred CeEEEEEEecCCCChhhhhhCCC-------CCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCe
Q 011005 275 KCMFLIYEYMERGSLFCNLHNNE-------DAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEA 347 (496)
Q Consensus 275 ~~~~lV~e~~~~g~L~~~l~~~~-------~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~ 347 (496)
+..++||||+++|+|.+++.... ....+++..++.++.||+.||.||| +.+|+||||||+||+++.++.+
T Consensus 101 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~NIli~~~~~~ 177 (322)
T 1p4o_A 101 QPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTV 177 (322)
T ss_dssp SSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCSGGGEEECTTCCE
T ss_pred CccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHH---HCCCccCCCccceEEEcCCCeE
Confidence 99999999999999999987532 1135789999999999999999999 6799999999999999999999
Q ss_pred EEccccccccccCCCCC--ccccccccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccCCCCCCcchh
Q 011005 348 FVADFGTARLLHADSSN--RTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSSDPKIML 424 (496)
Q Consensus 348 kl~Dfg~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~~~~~~~ 424 (496)
||+|||+++........ .....+|+.|+|||.+.+..++.++||||+|+++|+|++ |+.||.... .....
T Consensus 178 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~-------~~~~~ 250 (322)
T 1p4o_A 178 KIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLS-------NEQVL 250 (322)
T ss_dssp EECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSC-------HHHHH
T ss_pred EECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCC-------HHHHH
Confidence 99999999866433221 223456889999999999999999999999999999999 899986321 11222
Q ss_pred HhhhcCCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhcc
Q 011005 425 IDVLDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRK 477 (496)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~ 477 (496)
.............. ....+.+++.+||+.||++|||+.|+++++.....
T Consensus 251 ~~~~~~~~~~~~~~----~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~ 299 (322)
T 1p4o_A 251 RFVMEGGLLDKPDN----CPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 299 (322)
T ss_dssp HHHHTTCCCCCCTT----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred HHHHcCCcCCCCCC----CCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhc
Confidence 22222222211111 12347789999999999999999999999876533
No 164
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=4.5e-43 Score=334.84 Aligned_cols=259 Identities=27% Similarity=0.446 Sum_probs=194.6
Q ss_pred HhCCCCcceeeecCCeeEEEEEeCCCcEEEEEEcccch-hHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEE
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSE-ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYE 282 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e 282 (496)
.++|++.+.||+|+||+||+|.+.+ .||+|+++... .....+.+.+|+.++++++||||+++++++. ....++|||
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~~~~~~--~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e 99 (289)
T 3og7_A 23 DGQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST-APQLAIVTQ 99 (289)
T ss_dssp TTSCEEEEEEEECSSEEEEEEESSS--EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEE
T ss_pred ccceeeeeEecCCCCeEEEEEEEcC--ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeecc-CCccEEEEE
Confidence 4689999999999999999998743 59999987543 3344577899999999999999999999664 456789999
Q ss_pred ecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCC
Q 011005 283 YMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADS 362 (496)
Q Consensus 283 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 362 (496)
|+++++|.+++.... ..+++..++.++.|++.||.||| +.+++||||||+||+++.++.++|+|||++.......
T Consensus 100 ~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~L~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 174 (289)
T 3og7_A 100 WCEGSSLYHHLHASE--TKFEMKKLIDIARQTARGMDYLH---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWS 174 (289)
T ss_dssp CCCEEEHHHHHTTC-----CCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEETTTEEEECCCC---------
T ss_pred ecCCCcHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHH---hCCcccccCccceEEECCCCCEEEccceecccccccc
Confidence 999999999997543 36899999999999999999999 6799999999999999999999999999997654322
Q ss_pred --CCccccccccccccccccc---cCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCC
Q 011005 363 --SNRTLLAGTYGYIAPELAY---TMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVD 437 (496)
Q Consensus 363 --~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (496)
.......||+.|+|||.+. +..++.++||||+|+++|+|++|+.||.... ...................
T Consensus 175 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~------~~~~~~~~~~~~~~~~~~~ 248 (289)
T 3og7_A 175 GSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNIN------NRDQIIEMVGRGSLSPDLS 248 (289)
T ss_dssp ---------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCC------CHHHHHHHHHHTSCCCCTT
T ss_pred ccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccc------hHHHHHHHhcccccCcchh
Confidence 2223456899999999986 6678889999999999999999999996322 1111112222222222211
Q ss_pred hhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhc
Q 011005 438 RKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITR 476 (496)
Q Consensus 438 ~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~ 476 (496)
.........+.+++.+||+.||++|||+.|+++.+....
T Consensus 249 ~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~ 287 (289)
T 3og7_A 249 KVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELA 287 (289)
T ss_dssp SSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred hccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHh
Confidence 111112235789999999999999999999999987643
No 165
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=5.4e-43 Score=330.27 Aligned_cols=255 Identities=25% Similarity=0.369 Sum_probs=208.0
Q ss_pred hCCCCcceeeecCCeeEEEEEeCCCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEec
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEYM 284 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~~ 284 (496)
++|++.+.||+|+||.||+|.+.+++.||+|.+...... .+.+.+|+.++++++||||+++++++..++..++||||+
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~~--~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 85 (267)
T 3t9t_A 8 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMS--EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFM 85 (267)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTBC--HHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCC
T ss_pred hheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCCC--HHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCC
Confidence 578889999999999999999988999999999875432 256889999999999999999999999999999999999
Q ss_pred CCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCC-
Q 011005 285 ERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSS- 363 (496)
Q Consensus 285 ~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~- 363 (496)
++++|.+++.... ..+++..++.++.|++.||.||| +.+++||||||+||+++.++.++|+|||++........
T Consensus 86 ~~~~L~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~ 160 (267)
T 3t9t_A 86 EHGCLSDYLRTQR--GLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT 160 (267)
T ss_dssp TTCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHH
T ss_pred CCCcHHHHHhhCc--ccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCchheEEECCCCCEEEccccccccccccccc
Confidence 9999999997643 25889999999999999999999 77999999999999999999999999999986643211
Q ss_pred CccccccccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHHH
Q 011005 364 NRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVIR 442 (496)
Q Consensus 364 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (496)
......+++.|+|||.+.+..++.++||||+|+++|+|++ |+.||.... ............... ....
T Consensus 161 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~-------~~~~~~~i~~~~~~~-~~~~--- 229 (267)
T 3t9t_A 161 SSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRS-------NSEVVEDISTGFRLY-KPRL--- 229 (267)
T ss_dssp STTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC-------HHHHHHHHHTTCCCC-CCTT---
T ss_pred ccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCC-------HHHHHHHHhcCCcCC-CCcc---
Confidence 1223456788999999999999999999999999999999 899986321 111222222221111 1110
Q ss_pred HHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhcc
Q 011005 443 DILLISTVSFACLQSNPKSRPTMQSVSQEFLITRK 477 (496)
Q Consensus 443 ~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~ 477 (496)
....+.+++.+||+.||++|||+.|+++++....+
T Consensus 230 ~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~ 264 (267)
T 3t9t_A 230 ASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 264 (267)
T ss_dssp SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 12247789999999999999999999999876554
No 166
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=3.5e-43 Score=346.73 Aligned_cols=276 Identities=22% Similarity=0.263 Sum_probs=204.7
Q ss_pred cHHHHHHHHhCCCCcceeeecCCeeEEEEEeCCCcEEEEEEcccch----------hHHHHHHHHHHHHHHHhhcccccc
Q 011005 196 VYEDLIEATEDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSE----------ELAFIKSFKNEAQVLSQVLHRNIV 265 (496)
Q Consensus 196 ~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~----------~~~~~~~~~~e~~~l~~l~h~niv 265 (496)
..+++....++|.+.+.||+|+||.||+|...+|+.||||++.... .....+.+.+|+.++++++||||+
T Consensus 13 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv 92 (362)
T 3pg1_A 13 LIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNIL 92 (362)
T ss_dssp HHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred HHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCcc
Confidence 3567777889999999999999999999998889999999986532 122346789999999999999999
Q ss_pred cccceeec-----CCeEEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceE
Q 011005 266 KLYGYCLH-----KKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNIL 340 (496)
Q Consensus 266 ~~~~~~~~-----~~~~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil 340 (496)
++++++.. ....++||||++ |+|.+.+.... ..+++..+..++.||+.||.||| +.+|+||||||+||+
T Consensus 93 ~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~NIl 166 (362)
T 3pg1_A 93 GLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQR--IVISPQHIQYFMYHILLGLHVLH---EAGVVHRDLHPGNIL 166 (362)
T ss_dssp CCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTT--SCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEE
T ss_pred ceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHH---HCcCEecCCChHHEE
Confidence 99999843 346899999998 58888887543 36899999999999999999999 679999999999999
Q ss_pred ecCCCCeEEccccccccccCCCCCcccccccccccccccccc-CCcCcccchhhHHHHHHHHHhCCCCCccccccCC---
Q 011005 341 LNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYT-MVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSS--- 416 (496)
Q Consensus 341 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~--- 416 (496)
++.++.+||+|||+++...... ......+|+.|+|||++.+ ..++.++||||+|+++|+|++|+.||........
T Consensus 167 ~~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~ 245 (362)
T 3pg1_A 167 LADNNDITICDFNLAREDTADA-NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNK 245 (362)
T ss_dssp ECTTCCEEECCTTC----------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH
T ss_pred EcCCCCEEEEecCccccccccc-ccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 9999999999999997554332 2344578999999999887 6789999999999999999999999964221000
Q ss_pred ------CCCC-------cchhHhhhcCCCCCCCChhH----HHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccC
Q 011005 417 ------SSDP-------KIMLIDVLDQRLPPPVDRKV----IRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKT 478 (496)
Q Consensus 417 ------~~~~-------~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~ 478 (496)
.... .................... ......+.+|+.+||+.||++|||+.|+++|+|+....
T Consensus 246 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~ 324 (362)
T 3pg1_A 246 IVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHPYFESLF 324 (362)
T ss_dssp HHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGTTTC
T ss_pred HHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcCchhhhcc
Confidence 0000 00000111111111000000 01123477999999999999999999999999997653
No 167
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=1.7e-42 Score=351.09 Aligned_cols=251 Identities=24% Similarity=0.395 Sum_probs=203.4
Q ss_pred HhCCCCcceeeecCCeeEEEEEeCCCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCC-eEEEEEE
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKK-CMFLIYE 282 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-~~~lV~e 282 (496)
.++|++.+.||+|+||.||+|.++ ++.||||.++... ..+.+.+|+.++++++||||+++++++.... ..++|||
T Consensus 192 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e 267 (450)
T 1k9a_A 192 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA---TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTE 267 (450)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT---TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEE
T ss_pred hHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch---HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEE
Confidence 467888999999999999999885 7899999998654 2367899999999999999999999987655 7899999
Q ss_pred ecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCC
Q 011005 283 YMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADS 362 (496)
Q Consensus 283 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 362 (496)
|+++|+|.+++..... ..+++..++.++.||+.||+||| +++++||||||+|||++.++.+||+|||+++.....
T Consensus 268 ~~~~g~L~~~l~~~~~-~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~- 342 (450)
T 1k9a_A 268 YMAKGSLVDYLRSRGR-SVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST- 342 (450)
T ss_dssp CCTTCBHHHHHHHHCT-TTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTSCEEECCCTTCEECC---
T ss_pred ecCCCcHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCHhhEEECCCCCEEEeeCCCccccccc-
Confidence 9999999999986432 24789999999999999999999 779999999999999999999999999999854322
Q ss_pred CCccccccccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccCCCCCCcchhHhhhcC-CCCCCCChhH
Q 011005 363 SNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSSDPKIMLIDVLDQ-RLPPPVDRKV 440 (496)
Q Consensus 363 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 440 (496)
.....+++.|+|||.+.+..++.++||||||+++|||++ |+.||.... .......+... +++.+.
T Consensus 343 --~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~-------~~~~~~~i~~~~~~~~p~---- 409 (450)
T 1k9a_A 343 --QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP-------LKDVVPRVEKGYKMDAPD---- 409 (450)
T ss_dssp ------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSC-------TTTHHHHHHTTCCCCCCT----
T ss_pred --ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCC-------HHHHHHHHHcCCCCCCCC----
Confidence 222357889999999999999999999999999999998 999996432 11122222221 222111
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhcc
Q 011005 441 IRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRK 477 (496)
Q Consensus 441 ~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~ 477 (496)
.....+.+++.+||+.||++|||+.++++.+.....
T Consensus 410 -~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~ 445 (450)
T 1k9a_A 410 -GCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRT 445 (450)
T ss_dssp -TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -cCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHH
Confidence 112357789999999999999999999998876554
No 168
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=4.4e-43 Score=344.08 Aligned_cols=262 Identities=21% Similarity=0.315 Sum_probs=209.2
Q ss_pred HhCCCCcceeeecCCeeEEEEEeCCCcEEEEEEcccchhHH----------------HHHHHHHHHHHHHhhcccccccc
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEELA----------------FIKSFKNEAQVLSQVLHRNIVKL 267 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~----------------~~~~~~~e~~~l~~l~h~niv~~ 267 (496)
.++|.+.+.||+|+||.||+|.. +++.||+|.+....... ..+.+.+|+.++++++||||+++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 36899999999999999999988 89999999987643211 11678999999999999999999
Q ss_pred cceeecCCeEEEEEEecCCCChhhh------hhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEe
Q 011005 268 YGYCLHKKCMFLIYEYMERGSLFCN------LHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILL 341 (496)
Q Consensus 268 ~~~~~~~~~~~lV~e~~~~g~L~~~------l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~ 341 (496)
++++...+..++||||+++|+|.++ +.... ...+++..++.++.|++.||.|||+ ..|++||||||+||++
T Consensus 109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~--~~~i~H~dl~p~Nil~ 185 (348)
T 2pml_X 109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNY-TCFIPIQVIKCIIKSVLNSFSYIHN--EKNICHRDVKPSNILM 185 (348)
T ss_dssp SEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSS-CCCCCHHHHHHHHHHHHHHHHHHHH--TSCEECCCCCGGGEEE
T ss_pred EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhcc-ccCCCHHHHHHHHHHHHHHHHHHhc--cCCEeecCCChHhEEE
Confidence 9999999999999999999999998 55421 3478999999999999999999993 2799999999999999
Q ss_pred cCCCCeEEccccccccccCCCCCccccccccccccccccccC-CcCc-ccchhhHHHHHHHHHhCCCCCccccccCCCCC
Q 011005 342 NSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYTM-VMTE-KCDVYSFGVVTLEVLMGKHPRDILSSLSSSSD 419 (496)
Q Consensus 342 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~-~~DvwslG~il~el~~g~~p~~~~~~~~~~~~ 419 (496)
+.++.++|+|||++...... ......|++.|+|||.+.+. .++. ++||||+|+++|+|++|+.||.....
T Consensus 186 ~~~~~~kl~dfg~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~------ 257 (348)
T 2pml_X 186 DKNGRVKLSDFGESEYMVDK--KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKIS------ 257 (348)
T ss_dssp CTTSCEEECCCTTCEECBTT--EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSC------
T ss_pred cCCCcEEEeccccccccccc--cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCc------
Confidence 99999999999999876433 33446789999999999887 6666 99999999999999999999964321
Q ss_pred CcchhHhhhcCCCCCCCC--------------hhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhcc
Q 011005 420 PKIMLIDVLDQRLPPPVD--------------RKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRK 477 (496)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~ 477 (496)
...............+.. .........+.+++.+||+.||++|||+.|+++|+|+...
T Consensus 258 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~hp~f~~~ 329 (348)
T 2pml_X 258 LVELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHEWLADT 329 (348)
T ss_dssp SHHHHHHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGTTC
T ss_pred HHHHHHHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcCccccCC
Confidence 011111222121111100 0001122357899999999999999999999999998654
No 169
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=9.1e-43 Score=337.11 Aligned_cols=261 Identities=23% Similarity=0.340 Sum_probs=208.9
Q ss_pred HHhCCCCcceeeecCCeeEEEEEe------CCCcEEEEEEcccchhHHHHHHHHHHHHHHHhh-cccccccccceeecCC
Q 011005 203 ATEDFDIRYCIGTGGYGSVYKAQL------PNGKVFALKKLHTSEELAFIKSFKNEAQVLSQV-LHRNIVKLYGYCLHKK 275 (496)
Q Consensus 203 ~~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~ 275 (496)
..++|.+.+.||+|+||+||+|.+ .+++.||||.+.........+.+.+|+.+++++ +||||+++++++...+
T Consensus 25 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~ 104 (316)
T 2xir_A 25 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPG 104 (316)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTT
T ss_pred chhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCC
Confidence 457899999999999999999974 356899999998765555567889999999999 6999999999987754
Q ss_pred -eEEEEEEecCCCChhhhhhCCCCC-------------ccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEe
Q 011005 276 -CMFLIYEYMERGSLFCNLHNNEDA-------------VELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILL 341 (496)
Q Consensus 276 -~~~lV~e~~~~g~L~~~l~~~~~~-------------~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~ 341 (496)
..++||||+++|+|.+++...... ..+++..++.++.|++.||.||| +.+|+||||||+||++
T Consensus 105 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~H~dikp~Nil~ 181 (316)
T 2xir_A 105 GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILL 181 (316)
T ss_dssp SCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEE
T ss_pred CceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHH---hCCcccccCccceEEE
Confidence 589999999999999999875431 12789999999999999999999 6799999999999999
Q ss_pred cCCCCeEEccccccccccCCCCC--ccccccccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccCCCC
Q 011005 342 NSKLEAFVADFGTARLLHADSSN--RTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSS 418 (496)
Q Consensus 342 ~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~ 418 (496)
+.++.+||+|||+++........ .....+|+.|+|||++.+..++.++||||+|+++|+|++ |+.||....
T Consensus 182 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~------ 255 (316)
T 2xir_A 182 SEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK------ 255 (316)
T ss_dssp CGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC------
T ss_pred CCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccc------
Confidence 99999999999999876543322 233567889999999999999999999999999999998 999986321
Q ss_pred CCcchhHhhhcCCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhc
Q 011005 419 DPKIMLIDVLDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITR 476 (496)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~ 476 (496)
................ .... ....+.+++.+||+.||++|||+.|+++++....
T Consensus 256 ~~~~~~~~~~~~~~~~-~~~~---~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~ 309 (316)
T 2xir_A 256 IDEEFCRRLKEGTRMR-APDY---TTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 309 (316)
T ss_dssp CSHHHHHHHHHTCCCC-CCTT---CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred hhHHHHHHhccCccCC-CCCC---CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 1111111111111111 1110 1224778999999999999999999999987654
No 170
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=1.1e-42 Score=333.43 Aligned_cols=276 Identities=16% Similarity=0.224 Sum_probs=210.1
Q ss_pred HhCCCCcceeeecCCeeEEEEEe-CCCcEEEEEEcccchhHHHHHHHHHHHHHHHhhccccccccccee-ecCCeEEEEE
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYC-LHKKCMFLIY 281 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~-~~~~~~~lV~ 281 (496)
.++|++.+.||+|+||.||+|.+ .+++.||+|++...... +.+.+|+.+++.++|++++..+.++ ......++||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 84 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH---PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM 84 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSSC---CHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEE
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcch---hHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEE
Confidence 46899999999999999999976 57999999998664422 3578999999999988877666655 5667889999
Q ss_pred EecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEec---CCCCeEEccccccccc
Q 011005 282 EYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLN---SKLEAFVADFGTARLL 358 (496)
Q Consensus 282 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~---~~~~~kl~Dfg~~~~~ 358 (496)
||+ +++|.+++.... ..+++..++.++.|++.||+||| +.+|+||||||+||+++ .++.+||+|||++...
T Consensus 85 e~~-~~~L~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~ 158 (296)
T 3uzp_A 85 ELL-GPSLEDLFNFCS--RKFSLKTVLLLADQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKY 158 (296)
T ss_dssp ECC-CCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEEC
T ss_pred Eec-CCCHHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCcccc
Confidence 999 899999997433 26899999999999999999999 77999999999999994 7889999999999876
Q ss_pred cCCCCC-------ccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCC
Q 011005 359 HADSSN-------RTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQR 431 (496)
Q Consensus 359 ~~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 431 (496)
...... .....||+.|+|||.+.+..++.++||||||+++|+|++|+.||...... .............
T Consensus 159 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~----~~~~~~~~~~~~~ 234 (296)
T 3uzp_A 159 RDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAA----TKRQKYERISEKK 234 (296)
T ss_dssp BCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCS----SSSSHHHHHHHHH
T ss_pred cccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCch----hhhhhhhhhcccc
Confidence 544321 23457999999999999999999999999999999999999999743321 1111111111111
Q ss_pred CCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCCCCCcccccccchhhh
Q 011005 432 LPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTPLVKHAAIQDISISEL 494 (496)
Q Consensus 432 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~~~~~~~~~~i~~~~~ 494 (496)
...+...........+.+++.+||+.||++|||++++++.+.......... ....++|+.+
T Consensus 235 ~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~~~--~~~~~dw~~~ 295 (296)
T 3uzp_A 235 MSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFS--YDYVFDWNML 295 (296)
T ss_dssp HHSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHTTCC--SSCCCGGGGC
T ss_pred cCCchHHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhcCCc--cccccccccc
Confidence 111110000111235789999999999999999999998877655443332 2233556554
No 171
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=4.9e-42 Score=330.31 Aligned_cols=262 Identities=22% Similarity=0.272 Sum_probs=205.0
Q ss_pred HHhCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchh---HHHHHHHHHHHHHHHhhcccccccccceee--cCCe
Q 011005 203 ATEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEE---LAFIKSFKNEAQVLSQVLHRNIVKLYGYCL--HKKC 276 (496)
Q Consensus 203 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~--~~~~ 276 (496)
..++|.+.+.||+|+||.||+|... +++.||+|.+..... ......+.+|+.++++++||||+++++++. ....
T Consensus 3 l~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 82 (305)
T 2wtk_C 3 LIGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQK 82 (305)
T ss_dssp --CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---C
T ss_pred cccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCe
Confidence 3578999999999999999999764 688999999976432 234567899999999999999999999984 4557
Q ss_pred EEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccc
Q 011005 277 MFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTAR 356 (496)
Q Consensus 277 ~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~ 356 (496)
.++||||++++ +.+++.... ...+++..+..++.||+.||.||| +.+++||||||+||+++.++.++|+|||++.
T Consensus 83 ~~lv~e~~~~~-l~~~~~~~~-~~~~~~~~~~~~~~qi~~al~~LH---~~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~ 157 (305)
T 2wtk_C 83 MYMVMEYCVCG-MQEMLDSVP-EKRFPVCQAHGYFCQLIDGLEYLH---SQGIVHKDIKPGNLLLTTGGTLKISALGVAE 157 (305)
T ss_dssp EEEEEECCSEE-HHHHHHHST-TCSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCE
T ss_pred EEEEehhccCC-HHHHHHhCc-ccccCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCcccEEEcCCCcEEeecccccc
Confidence 89999999876 766666533 236899999999999999999999 6799999999999999999999999999998
Q ss_pred cccCCCC--CccccccccccccccccccCC--cCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCC
Q 011005 357 LLHADSS--NRTLLAGTYGYIAPELAYTMV--MTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRL 432 (496)
Q Consensus 357 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~--~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (496)
....... ......||+.|+|||++.+.. ++.++||||+|+++|+|++|+.||.... .......+.....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-------~~~~~~~i~~~~~ 230 (305)
T 2wtk_C 158 ALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDN-------IYKLFENIGKGSY 230 (305)
T ss_dssp ECCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSS-------HHHHHHHHHHCCC
T ss_pred ccCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCch-------HHHHHHHHhcCCC
Confidence 7643222 223456899999999988654 4779999999999999999999986321 1112222222222
Q ss_pred CCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCCCC
Q 011005 433 PPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTPLV 481 (496)
Q Consensus 433 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~~~ 481 (496)
..+.. ....+.+++.+||+.||++|||++|+++|+|+....+..
T Consensus 231 ~~~~~-----~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~~~~~~~ 274 (305)
T 2wtk_C 231 AIPGD-----CGPPLSDLLKGMLEYEPAKRFSIRQIRQHSWFRKKHPPA 274 (305)
T ss_dssp CCCSS-----SCHHHHHHHHHHTCSSTTTSCCHHHHHHSHHHHSCCCC-
T ss_pred CCCCc-----cCHHHHHHHHHHccCChhhCCCHHHHhcCcccccCCCCc
Confidence 21111 112467899999999999999999999999998776543
No 172
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=4.1e-44 Score=344.41 Aligned_cols=264 Identities=24% Similarity=0.380 Sum_probs=191.3
Q ss_pred HhCCCCcceeeecCCeeEEEEEeCCCcEEEEEEcccchhHHHHHHHHHHHHHHHh--hcccccccccceeecCC----eE
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQ--VLHRNIVKLYGYCLHKK----CM 277 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~~~~~~~~~~----~~ 277 (496)
.++|.+.+.||+|+||.||+|.+. ++.||||++..... ..+.+|.+++.. ++||||+++++++.... ..
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~----~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 76 (303)
T 3gxj_A 2 ARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSREE----RSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQL 76 (303)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CT-TSCEEEEECC-TTH----HHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEE
T ss_pred cceeeehhhccCCCCeEEEEEEEc-CcceEEEEecccch----hhHHHHHHHHHHHhccCcceeeeeeecccCCCcccee
Confidence 367999999999999999999874 88999999876442 456778888887 68999999999998776 78
Q ss_pred EEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCC-----CCCeEEeCCCCCceEecCCCCeEEccc
Q 011005 278 FLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDC-----SPSIIHRDISSNNILLNSKLEAFVADF 352 (496)
Q Consensus 278 ~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~-----~~~i~H~dlkp~Nil~~~~~~~kl~Df 352 (496)
++||||+++|+|.+++... .+++..++.++.|++.||+|||... +.+|+||||||+||+++.++.+||+||
T Consensus 77 ~lv~e~~~~g~L~~~l~~~----~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nil~~~~~~~kl~DF 152 (303)
T 3gxj_A 77 WLVSDYHEHGSLFDYLNRY----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADL 152 (303)
T ss_dssp EEEEECCTTCCHHHHHHHC----CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC-CCCSCCCGGGC-CCTTCCC-BCCC
T ss_pred EEEEeccCCCCHHHHHhcc----CcchHHHHHHHHHHHHHHHHHHHHHhhhccCCCEeeCcCCHHHeEECCCCCEEEeec
Confidence 9999999999999999754 5788889999999999999999321 458999999999999999999999999
Q ss_pred cccccccCCCCC----ccccccccccccccccccC------CcCcccchhhHHHHHHHHHhC----------CCCCcccc
Q 011005 353 GTARLLHADSSN----RTLLAGTYGYIAPELAYTM------VMTEKCDVYSFGVVTLEVLMG----------KHPRDILS 412 (496)
Q Consensus 353 g~~~~~~~~~~~----~~~~~gt~~y~aPE~~~~~------~~~~~~DvwslG~il~el~~g----------~~p~~~~~ 412 (496)
|+++........ .....||+.|+|||++.+. .++.++||||||+++|||++| ..||....
T Consensus 153 g~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~~~ 232 (303)
T 3gxj_A 153 GLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLV 232 (303)
T ss_dssp CC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTTTC
T ss_pred CcceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccccccC
Confidence 999776544322 2234799999999998876 455789999999999999999 55554322
Q ss_pred ccCCCCCCcchhHhhhcCCCCCCCCh--hHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccC
Q 011005 413 SLSSSSDPKIMLIDVLDQRLPPPVDR--KVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKT 478 (496)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~ 478 (496)
... ................+.... ........+.+++.+||+.||++|||++|+++.+......
T Consensus 233 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~~ 298 (303)
T 3gxj_A 233 PSD--PSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 298 (303)
T ss_dssp C-C--CCCC-CHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CCC
T ss_pred CCC--ccHHHHHHHHHHhhcCCCccccccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhhhh
Confidence 111 111222222333333332222 1123445688999999999999999999999998766554
No 173
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=1.1e-43 Score=352.16 Aligned_cols=249 Identities=16% Similarity=0.134 Sum_probs=192.7
Q ss_pred HhCCCCcceeeecCCeeEEEEEe-CCCcEEEEEEcccch--hHHHHHHHHHHHHH---HHhhccccccccc-------ce
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSE--ELAFIKSFKNEAQV---LSQVLHRNIVKLY-------GY 270 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~e~~~---l~~l~h~niv~~~-------~~ 270 (496)
.++|.+.+.||+|+||+||+|.+ .+|+.||||++.... .....+.+.+|+.+ +++++||||++++ ++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 36788899999999999999986 469999999987431 22345778899954 5555799999998 55
Q ss_pred eecCC-----------------eEEEEEEecCCCChhhhhhCCCC----CccCCHHHHHHHHHHHHHHHHHHHhCCCCCe
Q 011005 271 CLHKK-----------------CMFLIYEYMERGSLFCNLHNNED----AVELDWAKRVNIVKAMAHALAYLHHDCSPSI 329 (496)
Q Consensus 271 ~~~~~-----------------~~~lV~e~~~~g~L~~~l~~~~~----~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i 329 (496)
+..++ ..++||||+ +|+|.+++..... ...+++..++.|+.||+.||+||| +.+|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~i 227 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLH---HYGL 227 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHH---HTTE
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHH---hCCe
Confidence 44432 278999999 6799999975321 123445888899999999999999 6799
Q ss_pred EEeCCCCCceEecCCCCeEEccccccccccCCCCCccccccccccccccccccC-----------CcCcccchhhHHHHH
Q 011005 330 IHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYTM-----------VMTEKCDVYSFGVVT 398 (496)
Q Consensus 330 ~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~~~~~DvwslG~il 398 (496)
+||||||+|||++.++.+||+|||+++... ......+| +.|+|||++.+. .++.++||||||+++
T Consensus 228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~---~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il 303 (377)
T 3byv_A 228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDG---ARVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVI 303 (377)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETT---CEEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHH
T ss_pred ecCCCCHHHEEEcCCCCEEEEechhheecC---CcccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHH
Confidence 999999999999999999999999998532 23344567 999999999988 899999999999999
Q ss_pred HHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhc
Q 011005 399 LEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITR 476 (496)
Q Consensus 399 ~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~ 476 (496)
|||++|+.||....... ....... .. ... ...+.+++.+||+.||++|||+.|+++|+|+..
T Consensus 304 ~elltg~~Pf~~~~~~~-------~~~~~~~-~~-~~~-------~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~ 365 (377)
T 3byv_A 304 YWIWCADLPITKDAALG-------GSEWIFR-SC-KNI-------PQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQ 365 (377)
T ss_dssp HHHHHSSCCC------C-------CSGGGGS-SC-CCC-------CHHHHHHHHHHTCSSGGGCCCHHHHHTSHHHHH
T ss_pred HHHHHCCCCCccccccc-------chhhhhh-hc-cCC-------CHHHHHHHHHHcCCCchhCCCHHHHhhChHHHH
Confidence 99999999996432211 1111111 11 111 124778999999999999999999999999865
No 174
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=2.6e-43 Score=338.75 Aligned_cols=261 Identities=25% Similarity=0.377 Sum_probs=204.3
Q ss_pred HHhCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEE
Q 011005 203 ATEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIY 281 (496)
Q Consensus 203 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~ 281 (496)
..++|++.+.||+|+||.||+|.++ +++.||+|.+..... ...+.+.+|+.+++.++||||+++++++...+..++||
T Consensus 17 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 95 (302)
T 2j7t_A 17 PNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSE-EELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMI 95 (302)
T ss_dssp GGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC-----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEE
T ss_pred CccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCH-HHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEE
Confidence 3568999999999999999999875 588999999876432 23467889999999999999999999999999999999
Q ss_pred EecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCC
Q 011005 282 EYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHAD 361 (496)
Q Consensus 282 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 361 (496)
||+++++|.+++.... ..+++..+..++.|++.||.||| +.+++||||||+||+++.++.+||+|||++......
T Consensus 96 e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 170 (302)
T 2j7t_A 96 EFCPGGAVDAIMLELD--RGLTEPQIQVVCRQMLEALNFLH---SKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKT 170 (302)
T ss_dssp ECCTTEEHHHHHHHHT--SCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHH
T ss_pred EeCCCCcHHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHh---cCCcccCCCCHHHEEECCCCCEEEEECCCCcccccc
Confidence 9999999999887532 25899999999999999999999 679999999999999999999999999998654322
Q ss_pred CCCccccccccccccccccc-----cCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCC
Q 011005 362 SSNRTLLAGTYGYIAPELAY-----TMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPV 436 (496)
Q Consensus 362 ~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (496)
........||+.|+|||++. +..++.++||||||+++|+|++|+.||..... ............+...
T Consensus 171 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-------~~~~~~~~~~~~~~~~ 243 (302)
T 2j7t_A 171 LQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNP-------MRVLLKIAKSDPPTLL 243 (302)
T ss_dssp HHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCH-------HHHHHHHHHSCCCCCS
T ss_pred ccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCH-------HHHHHHHhccCCcccC
Confidence 22233456899999999983 66788999999999999999999999864321 1112222222211111
Q ss_pred ChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccC
Q 011005 437 DRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKT 478 (496)
Q Consensus 437 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~ 478 (496)
.. ......+.+++.+||+.||++|||+.|+++|+|+....
T Consensus 244 ~~--~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~ 283 (302)
T 2j7t_A 244 TP--SKWSVEFRDFLKIALDKNPETRPSAAQLLEHPFVSSIT 283 (302)
T ss_dssp SG--GGSCHHHHHHHHHHSCSCTTTSCCHHHHTTSTTTTTCC
T ss_pred Cc--cccCHHHHHHHHHHcccChhhCCCHHHHhcChHHhhhc
Confidence 11 11123477899999999999999999999999997654
No 175
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=9.4e-43 Score=339.18 Aligned_cols=260 Identities=18% Similarity=0.225 Sum_probs=202.5
Q ss_pred HhCCCCcceeeecCCeeEEEEEe-CCCcEEEEEEcccchhHHHHHHHHHHHHHHHhhc-ccccccccceeec--CCeEEE
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVL-HRNIVKLYGYCLH--KKCMFL 279 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~--~~~~~l 279 (496)
.++|++.+.||+|+||+||+|.+ .+++.||+|++..... +.+.+|+.++++++ ||||+++++++.. ....++
T Consensus 35 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~l 110 (330)
T 3nsz_A 35 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKK----KKIKREIKILENLRGGPNIITLADIVKDPVSRTPAL 110 (330)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCCH----HHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEE
T ss_pred CCceEEEEEecccCCeEEEEEEECCCCcEEEEEEecccch----HHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEE
Confidence 36799999999999999999965 5789999999976442 56889999999997 9999999999987 567899
Q ss_pred EEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCC-CeEEccccccccc
Q 011005 280 IYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKL-EAFVADFGTARLL 358 (496)
Q Consensus 280 V~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~-~~kl~Dfg~~~~~ 358 (496)
||||+++++|.+++. .++...+..++.|++.||+||| +.+|+||||||+|||++.++ .+||+|||+++..
T Consensus 111 v~e~~~~~~l~~~~~------~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~ 181 (330)
T 3nsz_A 111 VFEHVNNTDFKQLYQ------TLTDYDIRFYMYEILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFY 181 (330)
T ss_dssp EEECCCCCCHHHHGG------GCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred EEeccCchhHHHHHH------hCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEc
Confidence 999999999998885 4788999999999999999999 77999999999999999776 8999999999876
Q ss_pred cCCCCCcccccccccccccccccc-CCcCcccchhhHHHHHHHHHhCCCCCccccccCC---------------------
Q 011005 359 HADSSNRTLLAGTYGYIAPELAYT-MVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSS--------------------- 416 (496)
Q Consensus 359 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~--------------------- 416 (496)
.... ......+++.|+|||.+.+ ..++.++||||+|+++|+|++|+.||........
T Consensus 182 ~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 260 (330)
T 3nsz_A 182 HPGQ-EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKY 260 (330)
T ss_dssp CTTC-CCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHT
T ss_pred CCCC-ccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHh
Confidence 5433 3344578999999999887 6789999999999999999999999842110000
Q ss_pred CCCCcchhHhhhcCCCCCCCC-----hhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhcc
Q 011005 417 SSDPKIMLIDVLDQRLPPPVD-----RKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRK 477 (496)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~ 477 (496)
..................... .........+.+|+.+||+.||++|||++|+++|+|+...
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~hp~f~~~ 326 (330)
T 3nsz_A 261 NIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTV 326 (330)
T ss_dssp TCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTSGGGTTC
T ss_pred ccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcCccHhhh
Confidence 000000000000000000000 0000112357899999999999999999999999999754
No 176
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=4.5e-43 Score=355.87 Aligned_cols=256 Identities=25% Similarity=0.424 Sum_probs=207.1
Q ss_pred HHhCCCCcceeeecCCeeEEEEEeCCCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEE
Q 011005 203 ATEDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYE 282 (496)
Q Consensus 203 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e 282 (496)
..++|.+.+.||+|+||+||+|.++++..||||+++.... ..+.+.+|+.++++++||||+++++++. .+..++|||
T Consensus 186 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e 262 (454)
T 1qcf_A 186 PRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSM--SVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITE 262 (454)
T ss_dssp CGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTSB--CHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEC
T ss_pred chHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCCc--cHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEe
Confidence 3567889999999999999999998899999999986442 2467899999999999999999999986 556899999
Q ss_pred ecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCC
Q 011005 283 YMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADS 362 (496)
Q Consensus 283 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 362 (496)
|+++|+|.+++.... ...+++..++.++.||+.||+||| +++|+||||||+|||++.++.+||+|||+++......
T Consensus 263 ~~~~g~L~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~ 338 (454)
T 1qcf_A 263 FMAKGSLLDFLKSDE-GSKQPLPKLIDFSAQIAEGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNE 338 (454)
T ss_dssp CCTTCBHHHHHHSHH-HHTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHH
T ss_pred ecCCCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCc
Confidence 999999999997542 225788999999999999999999 6799999999999999999999999999998764321
Q ss_pred C-CccccccccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccCCCCCCcchhHhhhcC-CCCCCCChh
Q 011005 363 S-NRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSSDPKIMLIDVLDQ-RLPPPVDRK 439 (496)
Q Consensus 363 ~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 439 (496)
. ......+++.|+|||++.+..++.++||||||+++|||++ |+.||.... .......+... +.+.+.
T Consensus 339 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~-------~~~~~~~i~~~~~~~~~~--- 408 (454)
T 1qcf_A 339 YTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMS-------NPEVIRALERGYRMPRPE--- 408 (454)
T ss_dssp HHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC-------HHHHHHHHHHTCCCCCCT---
T ss_pred eeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCC-------HHHHHHHHHcCCCCCCCC---
Confidence 1 1122346778999999999999999999999999999999 999996322 11122222222 222211
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhcc
Q 011005 440 VIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRK 477 (496)
Q Consensus 440 ~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~ 477 (496)
.....+.+++.+||+.||++|||++++++.+.....
T Consensus 409 --~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~ 444 (454)
T 1qcf_A 409 --NCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYT 444 (454)
T ss_dssp --TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSS
T ss_pred --CCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHh
Confidence 112357789999999999999999999999876544
No 177
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=8.9e-43 Score=338.89 Aligned_cols=262 Identities=26% Similarity=0.347 Sum_probs=206.9
Q ss_pred HhCCCCcceeeecCCeeEEEEEe------CCCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeE
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQL------PNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCM 277 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 277 (496)
.++|++.+.||+|+||.||+|.+ .+++.||||.+...........+.+|+.++++++||||+++++++......
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 108 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 108 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCc
Confidence 47899999999999999999974 357789999997654445556789999999999999999999999999999
Q ss_pred EEEEEecCCCChhhhhhCCCC----CccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecC---CCCeEEc
Q 011005 278 FLIYEYMERGSLFCNLHNNED----AVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNS---KLEAFVA 350 (496)
Q Consensus 278 ~lV~e~~~~g~L~~~l~~~~~----~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~---~~~~kl~ 350 (496)
++||||+++|+|.+++..... ...+++..++.++.|++.||.||| +.+++||||||+||+++. +..++|+
T Consensus 109 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH---~~~i~H~dlkp~NIli~~~~~~~~~kl~ 185 (327)
T 2yfx_A 109 FILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIG 185 (327)
T ss_dssp EEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred EEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHh---hCCeecCcCCHhHEEEecCCCcceEEEC
Confidence 999999999999999986532 135899999999999999999999 779999999999999984 4569999
Q ss_pred cccccccccCCCC--CccccccccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccCCCCCCcchhHhh
Q 011005 351 DFGTARLLHADSS--NRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSSDPKIMLIDV 427 (496)
Q Consensus 351 Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~ 427 (496)
|||++........ ......+++.|+|||.+.+..++.++||||||+++|+|++ |+.||.... ........
T Consensus 186 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~-------~~~~~~~~ 258 (327)
T 2yfx_A 186 DFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS-------NQEVLEFV 258 (327)
T ss_dssp CCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC-------HHHHHHHH
T ss_pred ccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcC-------HHHHHHHH
Confidence 9999986543322 2233567889999999999999999999999999999998 999986321 11112222
Q ss_pred hcCCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCC
Q 011005 428 LDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTP 479 (496)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~ 479 (496)
........... ....+.+++.+||+.||++|||+.|++++++.....+
T Consensus 259 ~~~~~~~~~~~----~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~~ 306 (327)
T 2yfx_A 259 TSGGRMDPPKN----CPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP 306 (327)
T ss_dssp HTTCCCCCCTT----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCH
T ss_pred hcCCCCCCCCC----CCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcCH
Confidence 22211111111 1224778999999999999999999999999876644
No 178
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.6e-43 Score=346.21 Aligned_cols=259 Identities=26% Similarity=0.405 Sum_probs=205.1
Q ss_pred HhCCCCcceeeecCCeeEEEEEe----CCCcEEEEEEcccch---hHHHHHHHHHHHHHHHhh-cccccccccceeecCC
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQL----PNGKVFALKKLHTSE---ELAFIKSFKNEAQVLSQV-LHRNIVKLYGYCLHKK 275 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~---~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~ 275 (496)
.++|++.+.||+|+||.||+|.. .+++.||||+++... .......+.+|+.+++++ +||||+++++++....
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 132 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET 132 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence 36799999999999999999976 478999999987532 112234567899999999 5999999999999999
Q ss_pred eEEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEcccccc
Q 011005 276 CMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTA 355 (496)
Q Consensus 276 ~~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~ 355 (496)
..++||||+++|+|.+++.... .+++..+..++.||+.||.||| +.+|+||||||+|||++.++.+||+|||++
T Consensus 133 ~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a 206 (355)
T 1vzo_A 133 KLHLILDYINGGELFTHLSQRE---RFTEHEVQIYVGEIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLS 206 (355)
T ss_dssp EEEEEECCCCSCBHHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEESCSSEE
T ss_pred eEEEEeecCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCcEEEeeCCCC
Confidence 9999999999999999997643 6899999999999999999999 679999999999999999999999999999
Q ss_pred ccccCCCC-Ccccccccccccccccccc--CCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCC
Q 011005 356 RLLHADSS-NRTLLAGTYGYIAPELAYT--MVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRL 432 (496)
Q Consensus 356 ~~~~~~~~-~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (496)
+....... .....+||+.|+|||++.+ ..++.++||||||+++|||++|+.||..... ................
T Consensus 207 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~---~~~~~~~~~~~~~~~~ 283 (355)
T 1vzo_A 207 KEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGE---KNSQAEISRRILKSEP 283 (355)
T ss_dssp EECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTS---CCCHHHHHHHHHHCCC
T ss_pred eecccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCc---cchHHHHHHHHhccCC
Confidence 86643222 2334579999999999986 3578899999999999999999999963221 1111111122222222
Q ss_pred CCCCChhHHHHHHHHHHHHHhcccCCCCCCC-----CHHHHHHHHHHhc
Q 011005 433 PPPVDRKVIRDILLISTVSFACLQSNPKSRP-----TMQSVSQEFLITR 476 (496)
Q Consensus 433 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-----s~~evl~~~~~~~ 476 (496)
+.+.. ....+.+++.+||+.||++|| |++|+++|+|+..
T Consensus 284 ~~~~~-----~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~~f~~ 327 (355)
T 1vzo_A 284 PYPQE-----MSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQK 327 (355)
T ss_dssp CCCTT-----SCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGTT
T ss_pred CCCcc-----cCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCcchhc
Confidence 11111 112467899999999999999 9999999999975
No 179
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=1.6e-43 Score=340.34 Aligned_cols=264 Identities=25% Similarity=0.388 Sum_probs=188.3
Q ss_pred HhCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEE
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYE 282 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e 282 (496)
.++|.+.+.||+|+||.||+|... +++.||||.+.........+.+.+|+.++++++||||+++++++...+..++|||
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 93 (303)
T 2vwi_A 14 RDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMK 93 (303)
T ss_dssp CCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEEE
T ss_pred hhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEeh
Confidence 468999999999999999999764 6889999998765444445678899999999999999999999999999999999
Q ss_pred ecCCCChhhhhhCC-----CCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEcccccccc
Q 011005 283 YMERGSLFCNLHNN-----EDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARL 357 (496)
Q Consensus 283 ~~~~g~L~~~l~~~-----~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 357 (496)
|+++++|.+++... .....+++..++.++.||+.||.||| +.+++||||||+||+++.++.++|+|||++..
T Consensus 94 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~ 170 (303)
T 2vwi_A 94 LLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLH---KNGQIHRDVKAGNILLGEDGSVQIADFGVSAF 170 (303)
T ss_dssp CCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTCCEEECCCHHHHH
T ss_pred hccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHH---hCCCCCCCCChhhEEEcCCCCEEEEeccchhe
Confidence 99999999988631 12336899999999999999999999 67999999999999999999999999999987
Q ss_pred ccCCCC-----Ccccccccccccccccccc-CCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCC
Q 011005 358 LHADSS-----NRTLLAGTYGYIAPELAYT-MVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQR 431 (496)
Q Consensus 358 ~~~~~~-----~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 431 (496)
...... ......||+.|+|||.+.+ ..++.++||||+|+++|+|++|+.||..... ...........
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-------~~~~~~~~~~~ 243 (303)
T 2vwi_A 171 LATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPP-------MKVLMLTLQND 243 (303)
T ss_dssp CC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCG-------GGHHHHHHTSS
T ss_pred eccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCch-------hhHHHHHhccC
Confidence 643221 1233568999999999876 5689999999999999999999999964321 11111111111
Q ss_pred CCCCCChh-----HHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhcc
Q 011005 432 LPPPVDRK-----VIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRK 477 (496)
Q Consensus 432 ~~~~~~~~-----~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~ 477 (496)
.+...... .......+.+++.+||+.||++|||+.|+++|+|+...
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~ 294 (303)
T 2vwi_A 244 PPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQKA 294 (303)
T ss_dssp CCCTTC-----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTSTTC---
T ss_pred CCccccccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhhChhhhcC
Confidence 11000000 00011247789999999999999999999999998754
No 180
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=1.9e-42 Score=332.05 Aligned_cols=260 Identities=22% Similarity=0.310 Sum_probs=209.9
Q ss_pred HHhCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccch--------hHHHHHHHHHHHHHHHhhc-ccccccccceee
Q 011005 203 ATEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSE--------ELAFIKSFKNEAQVLSQVL-HRNIVKLYGYCL 272 (496)
Q Consensus 203 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--------~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~ 272 (496)
..++|++.+.||+|+||.||+|.++ +++.||+|.+.... .....+.+.+|+.+++++. ||||+++++++.
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 94 (298)
T 1phk_A 15 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE 94 (298)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred hhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeec
Confidence 3578999999999999999999775 68999999986532 1233466789999999996 999999999999
Q ss_pred cCCeEEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccc
Q 011005 273 HKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADF 352 (496)
Q Consensus 273 ~~~~~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Df 352 (496)
.+...++||||+++++|.+++.... .+++..++.++.||+.||.||| +.+++||||||+||+++.++.++|+||
T Consensus 95 ~~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~df 168 (298)
T 1phk_A 95 TNTFFFLVFDLMKKGELFDYLTEKV---TLSEKETRKIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDF 168 (298)
T ss_dssp CSSEEEEEEECCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCC
T ss_pred cCCeEEEEEeccCCCcHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcceEEEcCCCcEEEecc
Confidence 9999999999999999999997643 6899999999999999999999 779999999999999999999999999
Q ss_pred cccccccCCCCCccccccccccccccccc------cCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHh
Q 011005 353 GTARLLHADSSNRTLLAGTYGYIAPELAY------TMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLID 426 (496)
Q Consensus 353 g~~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~ 426 (496)
|++....... ......+++.|+|||++. ...++.++||||+|+++|+|++|+.||.... .......
T Consensus 169 g~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~-------~~~~~~~ 240 (298)
T 1phk_A 169 GFSCQLDPGE-KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRK-------QMLMLRM 240 (298)
T ss_dssp TTCEECCTTC-CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS-------HHHHHHH
T ss_pred cchhhcCCCc-ccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCcc-------HHHHHHH
Confidence 9998765432 334457899999999885 4568889999999999999999999986321 1112222
Q ss_pred hhcCCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhcc
Q 011005 427 VLDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRK 477 (496)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~ 477 (496)
........+... .......+.+++.+||+.||++|||+.|+++|+|+...
T Consensus 241 ~~~~~~~~~~~~-~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~ 290 (298)
T 1phk_A 241 IMSGNYQFGSPE-WDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQY 290 (298)
T ss_dssp HHHTCCCCCTTT-GGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGCTT
T ss_pred HhcCCcccCccc-ccccCHHHHHHHHHHccCCcccCCCHHHHHhChHhhhc
Confidence 222222211110 11122357799999999999999999999999998654
No 181
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=4.2e-43 Score=335.17 Aligned_cols=260 Identities=25% Similarity=0.361 Sum_probs=192.4
Q ss_pred HhCCCCcceeeecCCeeEEEEEe-CCCcEEEEEEcccchhHH-HHHHHHHHHHHHHhhcccccccccceeecCCeEEEEE
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSEELA-FIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIY 281 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~ 281 (496)
.++|++.+.||+|+||+||+|.. .+++.||+|++....... ..+.+.++...++.++||||+++++++..++..++||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~ 85 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM 85 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEE
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEE
Confidence 46799999999999999999976 578999999997654322 2334455555677789999999999999999999999
Q ss_pred EecCCCChhhhhhCC-CCCccCCHHHHHHHHHHHHHHHHHHHhCCCC-CeEEeCCCCCceEecCCCCeEEcccccccccc
Q 011005 282 EYMERGSLFCNLHNN-EDAVELDWAKRVNIVKAMAHALAYLHHDCSP-SIIHRDISSNNILLNSKLEAFVADFGTARLLH 359 (496)
Q Consensus 282 e~~~~g~L~~~l~~~-~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~-~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 359 (496)
||+++ +|.+++... .....+++..++.++.|++.||+||| +. +++||||||+||+++.++.+||+|||+++...
T Consensus 86 e~~~~-~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 161 (290)
T 3fme_A 86 ELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLH---SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLV 161 (290)
T ss_dssp ECCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HHSCCCCCCCSGGGCEECTTCCEEBCCC-------
T ss_pred ehhcc-chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hcCCeecCCCCHHHEEECCCCCEEEeecCCccccc
Confidence 99975 887776531 12236899999999999999999999 65 99999999999999999999999999998764
Q ss_pred CCCCCcccccccccccccccc----ccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCC
Q 011005 360 ADSSNRTLLAGTYGYIAPELA----YTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPP 435 (496)
Q Consensus 360 ~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (496)
... ......||+.|+|||++ .+..++.++||||+|+++|+|++|+.||... ...............+..
T Consensus 162 ~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~------~~~~~~~~~~~~~~~~~~ 234 (290)
T 3fme_A 162 DDV-AKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSW------GTPFQQLKQVVEEPSPQL 234 (290)
T ss_dssp ---------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCC------SCHHHHHHHHHHSCCCCC
T ss_pred ccc-cccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCcccc------CchHHHHHHHhccCCCCc
Confidence 432 23345789999999996 5667899999999999999999999999632 112222223333322221
Q ss_pred CChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhcc
Q 011005 436 VDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRK 477 (496)
Q Consensus 436 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~ 477 (496)
.... ....+.+++.+||+.||++|||+.|+++|+|+...
T Consensus 235 ~~~~---~~~~~~~li~~~l~~~p~~Rpt~~e~l~hp~f~~~ 273 (290)
T 3fme_A 235 PADK---FSAEFVDFTSQCLKKNSKERPTYPELMQHPFFTLH 273 (290)
T ss_dssp CTTT---SCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHH
T ss_pred cccc---CCHHHHHHHHHHhhcChhhCcCHHHHHhCcccccC
Confidence 1111 12247789999999999999999999999999764
No 182
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=4.4e-43 Score=345.63 Aligned_cols=265 Identities=22% Similarity=0.258 Sum_probs=188.1
Q ss_pred HhCCCCcceeeecCCeeEEEEEe-CCCcEEEEEEcccch-hHHHHHHHHHHHHHHHhhcccccccccceeecC------C
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSE-ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHK------K 275 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~------~ 275 (496)
.++|++.+.||+|+||.||+|.+ .+|+.||||++.... .....+.+.+|+.+++.++||||+++++++... .
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~ 107 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN 107 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence 46899999999999999999975 578999999996542 334456788999999999999999999998654 5
Q ss_pred eEEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEcccccc
Q 011005 276 CMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTA 355 (496)
Q Consensus 276 ~~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~ 355 (496)
..++|+|++ +++|.+++... .+++..+..++.||+.||.||| +.||+||||||+||+++.++.+||+|||++
T Consensus 108 ~~~lv~e~~-~~~L~~~~~~~----~l~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kL~DFG~a 179 (367)
T 2fst_X 108 DVYLVTHLM-GADLNNIVKCQ----KLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA 179 (367)
T ss_dssp CCEEEEECC-CEECC-----C----CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECC----
T ss_pred eEEEEeccc-CCCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHhhEEECCCCCEEEeecccc
Confidence 679999999 68998888652 6899999999999999999999 779999999999999999999999999999
Q ss_pred ccccCCCCCcccccccccccccccccc-CCcCcccchhhHHHHHHHHHhCCCCCccccccC---------CCC-------
Q 011005 356 RLLHADSSNRTLLAGTYGYIAPELAYT-MVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLS---------SSS------- 418 (496)
Q Consensus 356 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~---------~~~------- 418 (496)
+..... ....+||+.|+|||++.+ ..++.++||||+||++|||++|+.||....... ...
T Consensus 180 ~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~ 256 (367)
T 2fst_X 180 RHTADE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 256 (367)
T ss_dssp --------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHTT
T ss_pred cccccc---CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHH
Confidence 865432 334578999999999887 678999999999999999999999996432110 000
Q ss_pred CCcchhHhhhcCCCC---CCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCC
Q 011005 419 DPKIMLIDVLDQRLP---PPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTP 479 (496)
Q Consensus 419 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~ 479 (496)
............... .............+.+|+.+||+.||++|||+.|+++|+|+.....
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~hp~~~~~~~ 320 (367)
T 2fst_X 257 ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 320 (367)
T ss_dssp CCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTCC
T ss_pred hhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcChhhhhccC
Confidence 000000011111000 0000000011234789999999999999999999999999986543
No 183
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=3.2e-42 Score=328.60 Aligned_cols=252 Identities=29% Similarity=0.482 Sum_probs=199.9
Q ss_pred HhCCCCcceeeecCCeeEEEEEe-CCCcEEEEEEcccchhH---H---HHHHHHHHHHHHHhhcccccccccceeecCCe
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSEEL---A---FIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKC 276 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~---~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 276 (496)
.++|++.+.||+|+||+||+|.+ .+++.||+|.+...... . ..+.+.+|+.++++++||||+++++++....
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~- 96 (287)
T 4f0f_A 18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP- 96 (287)
T ss_dssp STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT-
T ss_pred hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC-
Confidence 36799999999999999999976 47899999998654321 1 1157889999999999999999999997776
Q ss_pred EEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCC--eEEeCCCCCceEecCCCC-----eEE
Q 011005 277 MFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPS--IIHRDISSNNILLNSKLE-----AFV 349 (496)
Q Consensus 277 ~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~--i~H~dlkp~Nil~~~~~~-----~kl 349 (496)
++||||+++|+|.+.+.... ..+++..++.++.|++.||+||| +.+ ++||||||+||+++.++. +||
T Consensus 97 -~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~l~~~l~~lH---~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl 170 (287)
T 4f0f_A 97 -RMVMEFVPCGDLYHRLLDKA--HPIKWSVKLRLMLDIALGIEYMQ---NQNPPIVHRDLRSPNIFLQSLDENAPVCAKV 170 (287)
T ss_dssp -EEEEECCTTCBHHHHHHCTT--SCCCHHHHHHHHHHHHHHHHHHH---TSSSCCBCSCCSGGGEEESCCCTTCSCCEEE
T ss_pred -eEEEEecCCCCHHHHHhccc--CCccHHHHHHHHHHHHHHHHHHH---hCCCCeecCCCCcceEEEeccCCCCceeEEe
Confidence 59999999999998887543 26899999999999999999999 678 999999999999988776 999
Q ss_pred ccccccccccCCCCCcccccccccccccccc--ccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhh
Q 011005 350 ADFGTARLLHADSSNRTLLAGTYGYIAPELA--YTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDV 427 (496)
Q Consensus 350 ~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~--~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~ 427 (496)
+|||+++.... ......||+.|+|||++ .+..++.++||||+|+++|+|++|+.||..... .........
T Consensus 171 ~Dfg~~~~~~~---~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~-----~~~~~~~~~ 242 (287)
T 4f0f_A 171 ADFGLSQQSVH---SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSY-----GKIKFINMI 242 (287)
T ss_dssp CCCTTCBCCSS---CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCC-----CHHHHHHHH
T ss_pred CCCCccccccc---cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccc-----cHHHHHHHH
Confidence 99999975432 33446789999999998 455678999999999999999999999963221 111111222
Q ss_pred hcCCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHH
Q 011005 428 LDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFL 473 (496)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~ 473 (496)
............ ....+.+++.+||+.||++|||++|+++.+.
T Consensus 243 ~~~~~~~~~~~~---~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~ 285 (287)
T 4f0f_A 243 REEGLRPTIPED---CPPRLRNVIELCWSGDPKKRPHFSYIVKELS 285 (287)
T ss_dssp HHSCCCCCCCTT---SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred hccCCCCCCCcc---cCHHHHHHHHHHhcCChhhCcCHHHHHHHHH
Confidence 222222222111 1234779999999999999999999999874
No 184
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=7.2e-43 Score=335.61 Aligned_cols=262 Identities=23% Similarity=0.348 Sum_probs=203.1
Q ss_pred hCCCCcceeeecCCeeEEEEEe-----CCCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecC--CeE
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQL-----PNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHK--KCM 277 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~ 277 (496)
.+|++.+.||+|+||.||+|.+ .+++.||+|++.........+.+.+|+.++++++||||+++++++... ...
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 100 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI 100 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCE
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceE
Confidence 5688899999999999999983 468999999998665444557789999999999999999999999876 668
Q ss_pred EEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEcccccccc
Q 011005 278 FLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARL 357 (496)
Q Consensus 278 ~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 357 (496)
++||||+++|+|.+++.... ..+++..++.++.|++.||+||| +.+|+||||||+||+++.++.++|+|||++..
T Consensus 101 ~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~ 175 (302)
T 4e5w_A 101 KLIMEFLPSGSLKEYLPKNK--NKINLKQQLKYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKA 175 (302)
T ss_dssp EEEEECCTTCBHHHHHHHHT--TTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCCTTCEE
T ss_pred EEEEEeCCCCcHHHHHHhcc--ccCCHHHHHHHHHHHHHHHHHhh---cCCcccCCCchheEEEcCCCCEEECccccccc
Confidence 99999999999999996543 25899999999999999999999 77999999999999999999999999999987
Q ss_pred ccCCCC---CccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCcccccc----CCCCCCc---chhHhh
Q 011005 358 LHADSS---NRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSL----SSSSDPK---IMLIDV 427 (496)
Q Consensus 358 ~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~----~~~~~~~---~~~~~~ 427 (496)
...... ......+|..|+|||.+.+..++.++||||+|+++|+|++|+.|+...... ....... ......
T Consensus 176 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (302)
T 4e5w_A 176 IETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNT 255 (302)
T ss_dssp CCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHH
T ss_pred ccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHH
Confidence 754432 123356788899999999999999999999999999999999986422100 0000001 111111
Q ss_pred hcCCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHH
Q 011005 428 LDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLI 474 (496)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~ 474 (496)
.......+... .....+.+++.+||+.||++|||+.|+++.+..
T Consensus 256 ~~~~~~~~~~~---~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ 299 (302)
T 4e5w_A 256 LKEGKRLPCPP---NCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEA 299 (302)
T ss_dssp HHTTCCCCCCT---TCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHH
T ss_pred HhccCCCCCCC---CCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHH
Confidence 11111111111 112347799999999999999999999998754
No 185
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=1.6e-42 Score=335.72 Aligned_cols=260 Identities=23% Similarity=0.332 Sum_probs=205.9
Q ss_pred CCCcceeeecCCeeEEEEEeC-----CCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeec--CCeEEE
Q 011005 207 FDIRYCIGTGGYGSVYKAQLP-----NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLH--KKCMFL 279 (496)
Q Consensus 207 ~~~~~~lg~G~~g~Vy~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~--~~~~~l 279 (496)
|++.+.||+|+||+||++.+. +++.||||++.........+.+.+|++++++++||||+++++++.. ....++
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 112 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL 112 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence 488999999999999998643 6889999999876555556789999999999999999999999987 467899
Q ss_pred EEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEcccccccccc
Q 011005 280 IYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLH 359 (496)
Q Consensus 280 V~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 359 (496)
||||+++|+|.+++... .+++..++.++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++....
T Consensus 113 v~e~~~~~~L~~~l~~~----~~~~~~~~~i~~~l~~~l~~LH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~ 185 (318)
T 3lxp_A 113 VMEYVPLGSLRDYLPRH----SIGLAQLLLFAQQICEGMAYLH---AQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVP 185 (318)
T ss_dssp EECCCTTCBHHHHGGGS----CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCGGGCEECC
T ss_pred EEecccCCcHHHHHhhC----CCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCchheEEEcCCCCEEECCcccccccc
Confidence 99999999999999764 4899999999999999999999 6799999999999999999999999999998775
Q ss_pred CCCCC---ccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCcccccc----CCCCCC---cchhHhhhc
Q 011005 360 ADSSN---RTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSL----SSSSDP---KIMLIDVLD 429 (496)
Q Consensus 360 ~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~----~~~~~~---~~~~~~~~~ 429 (496)
..... .....+|+.|+|||++.+..++.++||||+|+++|+|++|+.||...... ...... .....+.+.
T Consensus 186 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (318)
T 3lxp_A 186 EGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLE 265 (318)
T ss_dssp TTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHH
T ss_pred ccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHh
Confidence 43321 23345788899999999999999999999999999999999998633210 000000 001112222
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhc
Q 011005 430 QRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITR 476 (496)
Q Consensus 430 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~ 476 (496)
.....+.... ....+.+++.+||+.||++|||+.|+++.+....
T Consensus 266 ~~~~~~~~~~---~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~ 309 (318)
T 3lxp_A 266 RGERLPRPDK---CPAEVYHLMKNCWETEASFRPTFENLIPILKTVH 309 (318)
T ss_dssp TTCCCCCCTT---CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred cccCCCCCcc---ccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHH
Confidence 2222111111 1235789999999999999999999998876543
No 186
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=5e-43 Score=358.90 Aligned_cols=256 Identities=25% Similarity=0.405 Sum_probs=208.4
Q ss_pred HhCCCCcceeeecCCeeEEEEEeCC-CcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEE
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLPN-GKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYE 282 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e 282 (496)
.++|++.+.||+|+||.||+|.++. +..||||.++.... ..+.+.+|+.++++++||||+++++++......++|||
T Consensus 219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E 296 (495)
T 1opk_A 219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM--EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITE 296 (495)
T ss_dssp GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSS--CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCccc--chHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEE
Confidence 4578889999999999999998764 88999999976542 24678999999999999999999999999999999999
Q ss_pred ecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCC
Q 011005 283 YMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADS 362 (496)
Q Consensus 283 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 362 (496)
|+++|+|.+++..... ..+++..++.++.||+.||+||| +++|+||||||+|||++.++.+||+|||+++......
T Consensus 297 ~~~~g~L~~~l~~~~~-~~~~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 372 (495)
T 1opk_A 297 FMTYGNLLDYLRECNR-QEVSAVVLLYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDT 372 (495)
T ss_dssp CCTTCBHHHHHHHSCT-TTSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECGGGCEEECCTTCEECCTTCC
T ss_pred ccCCCCHHHHHHhcCc-CCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChhhEEECCCCcEEEeecccceeccCCc
Confidence 9999999999986432 36899999999999999999999 7799999999999999999999999999998764332
Q ss_pred CC-ccccccccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhH
Q 011005 363 SN-RTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKV 440 (496)
Q Consensus 363 ~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 440 (496)
.. .....+++.|+|||++.+..++.++||||||+++|||++ |+.||.... .. ...+.+..........
T Consensus 373 ~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~-------~~-~~~~~~~~~~~~~~~~-- 442 (495)
T 1opk_A 373 YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID-------LS-QVYELLEKDYRMERPE-- 442 (495)
T ss_dssp EECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCC-------GG-GHHHHHHTTCCCCCCT--
T ss_pred eeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCC-------HH-HHHHHHHcCCCCCCCC--
Confidence 21 222345778999999999999999999999999999999 999986322 11 1222222222211111
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhc
Q 011005 441 IRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITR 476 (496)
Q Consensus 441 ~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~ 476 (496)
.....+.+|+.+||+.||++|||+.++++.+....
T Consensus 443 -~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~ 477 (495)
T 1opk_A 443 -GCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 477 (495)
T ss_dssp -TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred -CCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHH
Confidence 11234778999999999999999999999986543
No 187
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=3e-42 Score=327.75 Aligned_cols=256 Identities=26% Similarity=0.323 Sum_probs=202.2
Q ss_pred HhCCCCcceeeecCCeeEEEEEeCC----CcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEE
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLPN----GKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFL 279 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 279 (496)
.++|.+.+.||+|+||+||+|.+.+ +..||+|.+.........+.+.+|+.++++++||||+++++++.++ ..++
T Consensus 11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-~~~~ 89 (281)
T 3cc6_A 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEE-PTWI 89 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSS-SCEE
T ss_pred ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcCC-CCEE
Confidence 4679999999999999999997532 3469999998765445567889999999999999999999998765 4689
Q ss_pred EEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEcccccccccc
Q 011005 280 IYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLH 359 (496)
Q Consensus 280 V~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 359 (496)
||||+++++|.+++.... ..+++..++.++.|++.||.||| +.+++||||||+||+++.++.+||+|||++....
T Consensus 90 v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 164 (281)
T 3cc6_A 90 IMELYPYGELGHYLERNK--NSLKVLTLVLYSLQICKAMAYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSRYIE 164 (281)
T ss_dssp EEECCTTCBHHHHHHHHT--TTCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEEEETTEEEECCCCGGGCC-
T ss_pred EEecCCCCCHHHHHHhcc--ccCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCccceEEECCCCcEEeCccCCCcccc
Confidence 999999999999997543 25899999999999999999999 7799999999999999999999999999998765
Q ss_pred CCCC-CccccccccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccCCCCCCcchhHhhhcCCCCCCCC
Q 011005 360 ADSS-NRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVD 437 (496)
Q Consensus 360 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (496)
.... ......+++.|+|||.+.+..++.++||||||+++|+|++ |+.||..... .................
T Consensus 165 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~-------~~~~~~~~~~~~~~~~~ 237 (281)
T 3cc6_A 165 DEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLEN-------KDVIGVLEKGDRLPKPD 237 (281)
T ss_dssp --------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCG-------GGHHHHHHHTCCCCCCT
T ss_pred cccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCCh-------HHHHHHHhcCCCCCCCC
Confidence 4322 1233457889999999999999999999999999999998 9999863221 11111111111111111
Q ss_pred hhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhc
Q 011005 438 RKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITR 476 (496)
Q Consensus 438 ~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~ 476 (496)
. ....+.+++.+||+.||++|||+.|+++++....
T Consensus 238 ~----~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~ 272 (281)
T 3cc6_A 238 L----CPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVY 272 (281)
T ss_dssp T----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred C----CCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHH
Confidence 1 1224778999999999999999999999987643
No 188
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=1.9e-42 Score=345.83 Aligned_cols=262 Identities=19% Similarity=0.270 Sum_probs=202.0
Q ss_pred HhCCCCcceeeecCCeeEEEEEe-CCCcEEEEEEcccchhHHHHHHHHHHHHHHHhhc--------ccccccccceee--
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVL--------HRNIVKLYGYCL-- 272 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~--------h~niv~~~~~~~-- 272 (496)
.++|++.+.||+|+||+||+|.. .+++.||||++.... ...+.+.+|+.+++.++ |+||+++++++.
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~ 113 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAE--HYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKIS 113 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH--HHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEE
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecCC--cchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeec
Confidence 46899999999999999999975 468899999997653 23467889999999996 788999999987
Q ss_pred --cCCeEEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCC-CeEEeCCCCCceEecCCC----
Q 011005 273 --HKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSP-SIIHRDISSNNILLNSKL---- 345 (496)
Q Consensus 273 --~~~~~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~-~i~H~dlkp~Nil~~~~~---- 345 (496)
.....++||||+ ++++.+.+.... ...+++..++.++.||+.||.||| ++ ||+||||||+|||++.++
T Consensus 114 ~~~~~~~~lv~e~~-~~~l~~~~~~~~-~~~~~~~~~~~i~~qi~~aL~~lH---~~~givHrDikp~NIll~~~~~~~~ 188 (397)
T 1wak_A 114 GVNGTHICMVFEVL-GHHLLKWIIKSN-YQGLPLPCVKKIIQQVLQGLDYLH---TKCRIIHTDIKPENILLSVNEQYIR 188 (397)
T ss_dssp ETTEEEEEEEECCC-CCBHHHHHHHTT-TSCCCHHHHHHHHHHHHHHHHHHH---HTTCEECCCCSGGGEEECCCHHHHH
T ss_pred CCCCceEEEEEecc-CccHHHHHHhcc-cCCCCHHHHHHHHHHHHHHHHHHH---HhCCEecCCCCHHHeeEeccchhhh
Confidence 566899999999 566666665432 236899999999999999999999 66 999999999999999775
Q ss_pred ---------------------------------------------CeEEccccccccccCCCCCcccccccccccccccc
Q 011005 346 ---------------------------------------------EAFVADFGTARLLHADSSNRTLLAGTYGYIAPELA 380 (496)
Q Consensus 346 ---------------------------------------------~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~ 380 (496)
.+||+|||++...... ....+||+.|+|||++
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~---~~~~~gt~~y~aPE~~ 265 (397)
T 1wak_A 189 RLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH---FTEDIQTRQYRSLEVL 265 (397)
T ss_dssp HHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC---SCSCCSCGGGCCHHHH
T ss_pred hhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc---CccCCCCCcccCChhh
Confidence 7999999999876433 3345789999999999
Q ss_pred ccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCc--chhHhhhcC-----------------------CCCC-
Q 011005 381 YTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPK--IMLIDVLDQ-----------------------RLPP- 434 (496)
Q Consensus 381 ~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~--~~~~~~~~~-----------------------~~~~- 434 (496)
.+..++.++|||||||++|||++|+.||............. ....+.... .+..
T Consensus 266 ~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (397)
T 1wak_A 266 IGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKL 345 (397)
T ss_dssp HTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCC
T ss_pred cCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCcccccccccc
Confidence 99999999999999999999999999997433211000000 000000000 0000
Q ss_pred -CCC---------hhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHh
Q 011005 435 -PVD---------RKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLIT 475 (496)
Q Consensus 435 -~~~---------~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~ 475 (496)
+.. .........+.+|+.+||+.||++|||++|+++|+|+.
T Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~ 396 (397)
T 1wak_A 346 KPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHPWLN 396 (397)
T ss_dssp CCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTSGGGG
T ss_pred CCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhCcccc
Confidence 000 00123345688999999999999999999999999985
No 189
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.4e-42 Score=337.14 Aligned_cols=258 Identities=24% Similarity=0.403 Sum_probs=199.7
Q ss_pred HhCCCCcceeeecCCeeEEEEEeC-CCc----EEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEE
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLP-NGK----VFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMF 278 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~----~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 278 (496)
.++|++.+.||+|+||+||+|.+. +++ +||+|.+.........+.+.+|+.++++++||||+++++++..+. .+
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~ 92 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ 92 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EE
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ce
Confidence 367999999999999999999764 444 357887765544444577899999999999999999999998765 78
Q ss_pred EEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccc
Q 011005 279 LIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLL 358 (496)
Q Consensus 279 lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 358 (496)
+|+|++.+|+|.+++..... .+++..++.++.||+.||.||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 93 ~v~~~~~~g~L~~~l~~~~~--~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~ 167 (327)
T 3lzb_A 93 LITQLMPFGCLLDYVREHKD--NIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 167 (327)
T ss_dssp EEECCCSSCBHHHHHHHTTT--CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEETTEEEECCTTC----
T ss_pred EEEEecCCCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHh---hCCCcCCCCCHHHEEEcCCCCEEEccCcceeEc
Confidence 99999999999999986432 6899999999999999999999 779999999999999999999999999999876
Q ss_pred cCCCCC--ccccccccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccCCCCCCcchhHhhhcCCCCCC
Q 011005 359 HADSSN--RTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSSDPKIMLIDVLDQRLPPP 435 (496)
Q Consensus 359 ~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (496)
...... .....+|+.|+|||.+.+..++.++||||||+++|+|++ |+.||.... . ......+......+
T Consensus 168 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~-------~-~~~~~~~~~~~~~~ 239 (327)
T 3lzb_A 168 GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP-------A-SEISSILEKGERLP 239 (327)
T ss_dssp ------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC-------G-GGHHHHHHTTCCCC
T ss_pred cCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCC-------H-HHHHHHHHcCCCCC
Confidence 443222 223456788999999999999999999999999999999 999996322 1 12222222222111
Q ss_pred CChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccC
Q 011005 436 VDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKT 478 (496)
Q Consensus 436 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~ 478 (496)
.... ....+.+++.+||+.||++|||+.|+++.+......
T Consensus 240 ~~~~---~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 279 (327)
T 3lzb_A 240 QPPI---CTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp CCTT---BCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTS
T ss_pred CCcc---CCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhC
Confidence 1111 122477899999999999999999999998776543
No 190
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.9e-42 Score=335.89 Aligned_cols=257 Identities=30% Similarity=0.423 Sum_probs=201.1
Q ss_pred hCCCCcceeeecCCeeEEEEEeCC-----CcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEE
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLPN-----GKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFL 279 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 279 (496)
++|++.+.||+|+||.||+|.+.. +..||+|.++..........+.+|+.++++++||||+++++++...+..++
T Consensus 44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 123 (333)
T 1mqb_A 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMI 123 (333)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEE
Confidence 467778999999999999997542 346999999875544555678999999999999999999999999999999
Q ss_pred EEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEcccccccccc
Q 011005 280 IYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLH 359 (496)
Q Consensus 280 V~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 359 (496)
||||+++|+|.+++.... ..+++..++.++.||+.||.||| +.+|+||||||+||+++.++.+||+|||+++...
T Consensus 124 v~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~ 198 (333)
T 1mqb_A 124 ITEYMENGALDKFLREKD--GEFSVLQLVGMLRGIAAGMKYLA---NMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLE 198 (333)
T ss_dssp EEECCTTEEHHHHHHHTT--TCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCCCC-----
T ss_pred EEeCCCCCcHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChheEEECCCCcEEECCCCcchhhc
Confidence 999999999999997542 26899999999999999999999 6799999999999999999999999999998765
Q ss_pred CCCCC---ccccccccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccCCCCCCcchhHhhhcC-CCCC
Q 011005 360 ADSSN---RTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSSDPKIMLIDVLDQ-RLPP 434 (496)
Q Consensus 360 ~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 434 (496)
..... .....+|+.|+|||.+.+..++.++||||||+++|||++ |+.||.... .......+... +.+.
T Consensus 199 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~-------~~~~~~~~~~~~~~~~ 271 (333)
T 1mqb_A 199 DDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELS-------NHEVMKAINDGFRLPT 271 (333)
T ss_dssp ------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC-------HHHHHHHHHTTCCCCC
T ss_pred cccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCC-------HHHHHHHHHCCCcCCC
Confidence 43221 122345778999999999999999999999999999999 999986321 11112222222 1111
Q ss_pred CCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccC
Q 011005 435 PVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKT 478 (496)
Q Consensus 435 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~ 478 (496)
+. .....+.+++.+||+.||++||++.|+++++......
T Consensus 272 ~~-----~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~ 310 (333)
T 1mqb_A 272 PM-----DCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRA 310 (333)
T ss_dssp CT-----TCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred cc-----cCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 11 1123477899999999999999999999998765543
No 191
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=8.8e-43 Score=340.86 Aligned_cols=262 Identities=25% Similarity=0.365 Sum_probs=204.9
Q ss_pred HhCCCCcceeeecCCeeEEEEEe-CCCcEEEEEEcccchhHHHHHHHHHHHHH-HHhhcccccccccceeecCCeEEEEE
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSEELAFIKSFKNEAQV-LSQVLHRNIVKLYGYCLHKKCMFLIY 281 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~-l~~l~h~niv~~~~~~~~~~~~~lV~ 281 (496)
.++|++.+.||+|+||.||+|.. .+|+.||||++...........+..|..+ ++.++||||+++++++...+..++||
T Consensus 50 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~ 129 (340)
T 3an0_A 50 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM 129 (340)
T ss_dssp SSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEEE
T ss_pred hhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEEH
Confidence 46788899999999999999976 57899999999765433334555566655 67779999999999999999999999
Q ss_pred EecCCCChhhhhhCC-CCCccCCHHHHHHHHHHHHHHHHHHHhCCCC-CeEEeCCCCCceEecCCCCeEEcccccccccc
Q 011005 282 EYMERGSLFCNLHNN-EDAVELDWAKRVNIVKAMAHALAYLHHDCSP-SIIHRDISSNNILLNSKLEAFVADFGTARLLH 359 (496)
Q Consensus 282 e~~~~g~L~~~l~~~-~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~-~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 359 (496)
||+++ +|.+++... .....+++..++.++.||+.||+||| +. +|+||||||+||+++.++.+||+|||+++...
T Consensus 130 e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH---~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 205 (340)
T 3an0_A 130 ELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLH---SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLV 205 (340)
T ss_dssp CCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHH---HHTCCCCCSCCSTTEEECSTTCEEECCCSHHHHHS
T ss_pred HHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hcCCeecCCCCHHHEEECCCCCEEEeeCCCceecc
Confidence 99975 898887631 12236899999999999999999999 54 99999999999999999999999999998764
Q ss_pred CCCCCccccccccccccccccc----cCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCC
Q 011005 360 ADSSNRTLLAGTYGYIAPELAY----TMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPP 435 (496)
Q Consensus 360 ~~~~~~~~~~gt~~y~aPE~~~----~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (496)
.. .......||+.|+|||++. +..++.++||||||+++|||++|+.||.... ..............+..
T Consensus 206 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~------~~~~~~~~~~~~~~~~~ 278 (340)
T 3an0_A 206 DS-VAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWG------TPFQQLKQVVEEPSPQL 278 (340)
T ss_dssp CH-HHHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCS------CHHHHHHHHHHSCCCCC
T ss_pred cc-cccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCcccc------chHHHHHHHhcCCCCCC
Confidence 32 1223357899999999964 3478899999999999999999999996321 11122223333222221
Q ss_pred CChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCC
Q 011005 436 VDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTP 479 (496)
Q Consensus 436 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~ 479 (496)
... .....+.+++.+||+.||++|||+.|+++|+|+.....
T Consensus 279 ~~~---~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~ 319 (340)
T 3an0_A 279 PAD---KFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFTLHES 319 (340)
T ss_dssp CGG---GSCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHHTT
T ss_pred Ccc---cCCHHHHHHHHHHccCCcccCcCHHHHhcCcCcccccc
Confidence 111 11234789999999999999999999999999976543
No 192
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=7.1e-42 Score=328.06 Aligned_cols=257 Identities=24% Similarity=0.357 Sum_probs=201.7
Q ss_pred hCCCCcceeeecCCeeEEEEEeCC----CcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceee-cCCeEEE
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLPN----GKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCL-HKKCMFL 279 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~-~~~~~~l 279 (496)
.+|++.+.||+|+||+||+|.+.+ +..||+|.+.........+.+.+|+.++++++||||+++++++. .++..++
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 104 (298)
T 3f66_A 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV 104 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEE
T ss_pred eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEE
Confidence 468888999999999999997543 23689999887655556678899999999999999999999864 4567899
Q ss_pred EEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEcccccccccc
Q 011005 280 IYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLH 359 (496)
Q Consensus 280 V~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 359 (496)
||||+++|+|.+++.... ..+++..++.++.|++.||+||| +.+++||||||+||+++.++.+||+|||+++...
T Consensus 105 v~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~ql~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~ 179 (298)
T 3f66_A 105 VLPYMKHGDLRNFIRNET--HNPTVKDLIGFGLQVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMY 179 (298)
T ss_dssp EEECCTTCBHHHHHHCTT--CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTCCEEECSCGGGCCCS
T ss_pred EEeCCCCCCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCchheEEECCCCCEEECccccccccc
Confidence 999999999999997643 36789999999999999999999 7799999999999999999999999999998664
Q ss_pred CCC----CCccccccccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccCCCCCCcchhHhhhcCCCCC
Q 011005 360 ADS----SNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSSDPKIMLIDVLDQRLPP 434 (496)
Q Consensus 360 ~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (496)
... .......+|+.|+|||.+.+..++.++||||+|+++|+|++ |.+||.... ...............
T Consensus 180 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~-------~~~~~~~~~~~~~~~ 252 (298)
T 3f66_A 180 DKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN-------TFDITVYLLQGRRLL 252 (298)
T ss_dssp CGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSC-------TTTHHHHHHTTCCCC
T ss_pred ccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCC-------HHHHHHHHhcCCCCC
Confidence 322 11233457789999999999999999999999999999999 555654221 111122222222111
Q ss_pred CCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhcc
Q 011005 435 PVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRK 477 (496)
Q Consensus 435 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~ 477 (496)
.... ....+.+++.+||+.||++|||+.|+++.+.....
T Consensus 253 ~~~~----~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~ 291 (298)
T 3f66_A 253 QPEY----CPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFS 291 (298)
T ss_dssp CCTT----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCcc----CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 1111 11247789999999999999999999999876544
No 193
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2e-42 Score=341.47 Aligned_cols=258 Identities=24% Similarity=0.354 Sum_probs=195.0
Q ss_pred CCCCcceeeecCCeeEEEEEeC--C--CcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeec-CCeEEEE
Q 011005 206 DFDIRYCIGTGGYGSVYKAQLP--N--GKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLH-KKCMFLI 280 (496)
Q Consensus 206 ~~~~~~~lg~G~~g~Vy~~~~~--~--~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-~~~~~lV 280 (496)
.|.+.+.||+|+||+||+|.+. + +..||+|.+.........+.+.+|+.++++++||||+++++++.. .+..++|
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv 169 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVV 169 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEE
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEE
Confidence 4667789999999999999753 2 246899998765554556789999999999999999999998754 5578999
Q ss_pred EEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccC
Q 011005 281 YEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHA 360 (496)
Q Consensus 281 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 360 (496)
|||+++|+|.+++.... ..+++..++.++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++....
T Consensus 170 ~e~~~~g~L~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~ 244 (373)
T 3c1x_A 170 LPYMKHGDLRNFIRNET--HNPTVKDLIGFGLQVAKGMKFLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 244 (373)
T ss_dssp EECCTTCBHHHHHHCTT--CCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCC--------
T ss_pred EECCCCCCHHHHHhhcc--cCCCHHHHHHHHHHHHHHHHHHH---HCCEecCccchheEEECCCCCEEEeeccccccccc
Confidence 99999999999997643 25788999999999999999999 77999999999999999999999999999986643
Q ss_pred CCC----CccccccccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccCCCCCCcchhHhhhcCCCCCC
Q 011005 361 DSS----NRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSSDPKIMLIDVLDQRLPPP 435 (496)
Q Consensus 361 ~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (496)
... ......+|+.|+|||.+.+..++.++||||||+++|||++ |.+||..... ...............
T Consensus 245 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~-------~~~~~~~~~~~~~~~ 317 (373)
T 3c1x_A 245 KEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT-------FDITVYLLQGRRLLQ 317 (373)
T ss_dssp -------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCS-------SCHHHHHHTTCCCCC
T ss_pred cccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCH-------HHHHHHHHcCCCCCC
Confidence 321 1223457788999999999999999999999999999999 6777753221 111222222221111
Q ss_pred CChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCC
Q 011005 436 VDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTP 479 (496)
Q Consensus 436 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~ 479 (496)
... ....+.+++.+||+.||++|||+.|+++++......-
T Consensus 318 p~~----~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~ 357 (373)
T 3c1x_A 318 PEY----CPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTF 357 (373)
T ss_dssp CTT----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTC
T ss_pred CCC----CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhc
Confidence 111 1224778999999999999999999999988765543
No 194
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=2.1e-43 Score=351.58 Aligned_cols=264 Identities=22% Similarity=0.287 Sum_probs=197.5
Q ss_pred hCCCCcceeeecCCeeEEEEEeCCCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCC------eEE
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKK------CMF 278 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~------~~~ 278 (496)
.+|.+.+.||+|+||+||+|.+..+..||+|++..... ...+|+++++.++||||+++++++.... ..+
T Consensus 40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~-----~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~ 114 (394)
T 4e7w_A 40 IAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR-----FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLN 114 (394)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT-----SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEE
T ss_pred ceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc-----hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEE
Confidence 57999999999999999999988777799998865432 2247999999999999999999985433 378
Q ss_pred EEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEec-CCCCeEEcccccccc
Q 011005 279 LIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLN-SKLEAFVADFGTARL 357 (496)
Q Consensus 279 lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~-~~~~~kl~Dfg~~~~ 357 (496)
+||||++++.+............+++..+..++.||+.||+||| +.+|+||||||+|||++ .++.+||+|||+++.
T Consensus 115 lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~ 191 (394)
T 4e7w_A 115 LVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIH---SIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKI 191 (394)
T ss_dssp EEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred EEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHEEEcCCCCcEEEeeCCCccc
Confidence 99999987544433332222336899999999999999999999 77999999999999999 789999999999987
Q ss_pred ccCCCCCccccccccccccccccccC-CcCcccchhhHHHHHHHHHhCCCCCccccccCC--------CCCCcchhH---
Q 011005 358 LHADSSNRTLLAGTYGYIAPELAYTM-VMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSS--------SSDPKIMLI--- 425 (496)
Q Consensus 358 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~--------~~~~~~~~~--- 425 (496)
..... ......||+.|+|||++.+. .++.++||||+||++|||++|+.||........ .........
T Consensus 192 ~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~ 270 (394)
T 4e7w_A 192 LIAGE-PNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMN 270 (394)
T ss_dssp CCTTC-CCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHC
T ss_pred ccCCC-CCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhC
Confidence 64433 23345789999999998765 589999999999999999999999964321100 000000000
Q ss_pred -hhhcCCCCCCCChhHH-----HHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhcc
Q 011005 426 -DVLDQRLPPPVDRKVI-----RDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRK 477 (496)
Q Consensus 426 -~~~~~~~~~~~~~~~~-----~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~ 477 (496)
.......+........ .....+.+|+.+||+.||++|||+.|+++|+|+..-
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~ 328 (394)
T 4e7w_A 271 PNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDEL 328 (394)
T ss_dssp GGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGSTT
T ss_pred hhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcChhhhhh
Confidence 0000111110000000 012357899999999999999999999999999753
No 195
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=1.3e-42 Score=352.14 Aligned_cols=255 Identities=27% Similarity=0.416 Sum_probs=201.1
Q ss_pred HhCCCCcceeeecCCeeEEEEEeCCCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEe
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEY 283 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~ 283 (496)
.++|++.+.||+|+||.||+|.++++..||||.++..... .+.+.+|+.++++++||||+++++++.. +..++||||
T Consensus 183 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~--~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~ 259 (452)
T 1fmk_A 183 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS--PEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEY 259 (452)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSSC--HHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECC
T ss_pred hhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCCCC--HHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehh
Confidence 4678889999999999999999988889999999865422 3578999999999999999999999876 568999999
Q ss_pred cCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCC
Q 011005 284 MERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSS 363 (496)
Q Consensus 284 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 363 (496)
+++|+|.+++.... ...+++..++.++.||+.||+||| +++|+||||||+|||++.++.+||+|||+++.......
T Consensus 260 ~~~gsL~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 335 (452)
T 1fmk_A 260 MSKGSLLDFLKGET-GKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY 335 (452)
T ss_dssp CTTCBHHHHHSHHH-HTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCCTTC-------
T ss_pred hcCCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChhhEEECCCCCEEECCCccceecCCCce
Confidence 99999999997431 125899999999999999999999 77999999999999999999999999999987643322
Q ss_pred C-ccccccccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccCCCCCCcchhHhhhcC-CCCCCCChhH
Q 011005 364 N-RTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSSDPKIMLIDVLDQ-RLPPPVDRKV 440 (496)
Q Consensus 364 ~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 440 (496)
. .....+++.|+|||.+.+..++.++||||||+++|||++ |+.||.... .......+... +.+.+.
T Consensus 336 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~-------~~~~~~~i~~~~~~~~~~---- 404 (452)
T 1fmk_A 336 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMV-------NREVLDQVERGYRMPCPP---- 404 (452)
T ss_dssp -------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCC-------HHHHHHHHHTTCCCCCCT----
T ss_pred ecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCC-------HHHHHHHHHcCCCCCCCC----
Confidence 1 223456788999999999999999999999999999999 999986322 11122222221 122111
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhcc
Q 011005 441 IRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRK 477 (496)
Q Consensus 441 ~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~ 477 (496)
.....+.+++.+||+.||++|||++++++.+.....
T Consensus 405 -~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~ 440 (452)
T 1fmk_A 405 -ECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFT 440 (452)
T ss_dssp -TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTS
T ss_pred -CCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhc
Confidence 112347789999999999999999999998865543
No 196
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=1.8e-42 Score=330.45 Aligned_cols=257 Identities=26% Similarity=0.403 Sum_probs=209.3
Q ss_pred HHhCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEE
Q 011005 203 ATEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIY 281 (496)
Q Consensus 203 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~ 281 (496)
..++|++.+.||+|+||+||+|.++ +++.||+|.+..... ..+.+.+|+.++++++||||+++++++..+...++||
T Consensus 11 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 88 (288)
T 3kfa_A 11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM--EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 88 (288)
T ss_dssp CGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCST--HHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEE
T ss_pred cccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCHH--HHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEE
Confidence 3567999999999999999999775 488999999976543 3467889999999999999999999999999999999
Q ss_pred EecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCC
Q 011005 282 EYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHAD 361 (496)
Q Consensus 282 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 361 (496)
||+++++|.+++..... ..+++..++.++.|++.||.||| +.+++||||||+||+++.++.++|+|||++......
T Consensus 89 e~~~~~~L~~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~ 164 (288)
T 3kfa_A 89 EFMTYGNLLDYLRECNR-QEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 164 (288)
T ss_dssp ECCTTEEHHHHHHHCCT-TTSCHHHHHHHHHHHHHHHHHHH---HHTCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSS
T ss_pred EcCCCCcHHHHHHhccc-CCccHhHHHHHHHHHHHHHHHHH---HCCccCCCCCcceEEEcCCCCEEEccCccceeccCC
Confidence 99999999999986432 36899999999999999999999 679999999999999999999999999999876543
Q ss_pred CCC-ccccccccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccCCCCCCcchhHhhhcCCCCCCCChh
Q 011005 362 SSN-RTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRK 439 (496)
Q Consensus 362 ~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 439 (496)
... .....+|+.|+|||.+.+..++.++||||+|+++|+|++ |..||.... .. ...+.+...........
T Consensus 165 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~-------~~-~~~~~~~~~~~~~~~~~ 236 (288)
T 3kfa_A 165 TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID-------LS-QVYELLEKDYRMERPEG 236 (288)
T ss_dssp SSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC-------GG-GHHHHHHTTCCCCCCTT
T ss_pred ccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC-------HH-HHHHHHhccCCCCCCCC
Confidence 322 223456788999999999999999999999999999999 999986322 11 12222222222111111
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhc
Q 011005 440 VIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITR 476 (496)
Q Consensus 440 ~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~ 476 (496)
....+.+++.+||+.||++|||+.|+++.+....
T Consensus 237 ---~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~ 270 (288)
T 3kfa_A 237 ---CPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 270 (288)
T ss_dssp ---CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ---CCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHH
Confidence 1234779999999999999999999999876543
No 197
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=2.3e-42 Score=329.67 Aligned_cols=260 Identities=24% Similarity=0.335 Sum_probs=209.2
Q ss_pred HHHhCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccch-hHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEE
Q 011005 202 EATEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSE-ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFL 279 (496)
Q Consensus 202 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 279 (496)
...++|++.+.||+|+||.||+|..+ +++.||+|.+.... .......+.+|+.++++++||||+++++++...+..++
T Consensus 19 ~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 98 (287)
T 2wei_A 19 TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYI 98 (287)
T ss_dssp HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred HHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEE
Confidence 35678999999999999999999775 78999999986543 22234678899999999999999999999999999999
Q ss_pred EEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCC---CCeEEccccccc
Q 011005 280 IYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSK---LEAFVADFGTAR 356 (496)
Q Consensus 280 V~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~---~~~kl~Dfg~~~ 356 (496)
||||+++++|.+.+.... .+++..++.++.||+.||.||| +.+++||||||+||+++.+ +.+||+|||++.
T Consensus 99 v~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~ 172 (287)
T 2wei_A 99 VGELYTGGELFDEIIKRK---RFSEHDAARIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLST 172 (287)
T ss_dssp EECCCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGG
T ss_pred EEEccCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCChhhEEEecCCCcccEEEeccCcce
Confidence 999999999998887543 6899999999999999999999 6799999999999999764 469999999998
Q ss_pred cccCCCCCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCC
Q 011005 357 LLHADSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPV 436 (496)
Q Consensus 357 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (496)
...... ......+++.|+|||.+.+. ++.++||||+|+++|+|++|+.||.... ...............+.
T Consensus 173 ~~~~~~-~~~~~~~~~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~-------~~~~~~~~~~~~~~~~~ 243 (287)
T 2wei_A 173 CFQQNT-KMKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPFYGKN-------EYDILKRVETGKYAFDL 243 (287)
T ss_dssp TBCCCS-SCSCHHHHHTTCCHHHHTTC-CCTHHHHHHHHHHHHHHHHSSCSSCCSS-------HHHHHHHHHHCCCCCCS
T ss_pred eecCCC-ccccccCcccccChHHhcCC-CCCchhhHhHHHHHHHHHhCCCCCCCCC-------HHHHHHHHHcCCCCCCc
Confidence 764332 22344688999999988764 8999999999999999999999986322 11122222222222211
Q ss_pred ChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhcc
Q 011005 437 DRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRK 477 (496)
Q Consensus 437 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~ 477 (496)
.. .......+.+++.+||+.||++|||+.|+++|+|+...
T Consensus 244 ~~-~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~~~~~ 283 (287)
T 2wei_A 244 PQ-WRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKY 283 (287)
T ss_dssp GG-GTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHSHHHHHH
T ss_pred hh-hhhcCHHHHHHHHHHcccChhhCcCHHHHhcCHHHhcc
Confidence 11 11112347789999999999999999999999999764
No 198
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=6.4e-42 Score=328.28 Aligned_cols=257 Identities=25% Similarity=0.329 Sum_probs=202.2
Q ss_pred CCCCcceeeecCCeeEEEEEeC-C---CcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeE-EEE
Q 011005 206 DFDIRYCIGTGGYGSVYKAQLP-N---GKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCM-FLI 280 (496)
Q Consensus 206 ~~~~~~~lg~G~~g~Vy~~~~~-~---~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~-~lV 280 (496)
.|...+.||+|+||+||+|.+. + +..||+|.+.........+.+.+|+.++++++||||+++++++...+.. ++|
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v 101 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVL 101 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEE
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEE
Confidence 3556788999999999999753 2 3379999998765555667889999999999999999999999876654 899
Q ss_pred EEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccC
Q 011005 281 YEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHA 360 (496)
Q Consensus 281 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 360 (496)
|||+.+|+|.+++.... ..+++..++.++.|++.||+||| +.+++||||||+||+++.++.+||+|||+++....
T Consensus 102 ~e~~~~~~L~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~ 176 (298)
T 3pls_A 102 LPYMCHGDLLQFIRSPQ--RNPTVKDLISFGLQVARGMEYLA---EQKFVHRDLAARNCMLDESFTVKVADFGLARDILD 176 (298)
T ss_dssp ECCCTTCBHHHHHHCTT--CCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTCCEEECCTTSSCTTTT
T ss_pred EecccCCCHHHHHhccc--cCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCcceEEEcCCCcEEeCcCCCcccccC
Confidence 99999999999998643 36789999999999999999999 67999999999999999999999999999976533
Q ss_pred CC----CCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCC
Q 011005 361 DS----SNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPV 436 (496)
Q Consensus 361 ~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (496)
.. .......+++.|+|||.+.+..++.++||||+|+++|+|++|..|+.. ..... ............+.
T Consensus 177 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~------~~~~~-~~~~~~~~~~~~~~ 249 (298)
T 3pls_A 177 REYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYR------HIDPF-DLTHFLAQGRRLPQ 249 (298)
T ss_dssp GGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTT------TSCGG-GHHHHHHTTCCCCC
T ss_pred CcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCc------cCCHH-HHHHHhhcCCCCCC
Confidence 21 222345678899999999999999999999999999999996555421 11111 12222222211111
Q ss_pred ChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhcc
Q 011005 437 DRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRK 477 (496)
Q Consensus 437 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~ 477 (496)
... ....+.+++.+||+.||++|||+.|+++.+.....
T Consensus 250 ~~~---~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~ 287 (298)
T 3pls_A 250 PEY---CPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVS 287 (298)
T ss_dssp CTT---CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred Ccc---chHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 111 12247789999999999999999999999876543
No 199
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=6.7e-42 Score=334.20 Aligned_cols=259 Identities=20% Similarity=0.321 Sum_probs=205.4
Q ss_pred HhCCCCcceeeecCCeeEEEEEe--CCCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccc------cccccceeecCC
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQL--PNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRN------IVKLYGYCLHKK 275 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~--~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~n------iv~~~~~~~~~~ 275 (496)
.++|++.+.||+|+||+||+|.+ .+++.||+|++.... ...+.+.+|+.+++.++|++ ++++++++...+
T Consensus 13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~ 90 (339)
T 1z57_A 13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVD--RYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHG 90 (339)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSH--HHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETT
T ss_pred cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCC--chhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCC
Confidence 46899999999999999999975 368899999997654 23467889999999998765 899999999999
Q ss_pred eEEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecC------------
Q 011005 276 CMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNS------------ 343 (496)
Q Consensus 276 ~~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~------------ 343 (496)
..++||||+ +++|.+++..... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.
T Consensus 91 ~~~lv~e~~-~~~l~~~l~~~~~-~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~ 165 (339)
T 1z57_A 91 HICIVFELL-GLSTYDFIKENGF-LPFRLDHIRKMAYQICKSVNFLH---SNKLTHTDLKPENILFVQSDYTEAYNPKIK 165 (339)
T ss_dssp EEEEEEECC-CCBHHHHHHHTTT-CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESCCCEEEEEC----
T ss_pred cEEEEEcCC-CCCHHHHHHhcCC-CCCcHHHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHEEEeccccccccCCccc
Confidence 999999999 8899999876532 35889999999999999999999 779999999999999987
Q ss_pred -------CCCeEEccccccccccCCCCCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCC
Q 011005 344 -------KLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSS 416 (496)
Q Consensus 344 -------~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~ 416 (496)
++.+||+|||+++..... .....||+.|+|||++.+..++.++||||+|+++|||++|+.||.......
T Consensus 166 ~~~~~~~~~~~kl~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~- 241 (339)
T 1z57_A 166 RDERTLINPDIKVVDFGSATYDDEH---HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKE- 241 (339)
T ss_dssp CEEEEESCCCEEECCCSSCEETTSC---CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHH-
T ss_pred cccccccCCCceEeeCcccccCccc---cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHH-
Confidence 668999999999765332 334578999999999999999999999999999999999999996432100
Q ss_pred CCCCcchhHhhhcCCCCC-------------------------------------CCChhHHHHHHHHHHHHHhcccCCC
Q 011005 417 SSDPKIMLIDVLDQRLPP-------------------------------------PVDRKVIRDILLISTVSFACLQSNP 459 (496)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~-------------------------------------~~~~~~~~~~~~l~~li~~cl~~dP 459 (496)
......... ...+. ............+.+++.+||+.||
T Consensus 242 ---~~~~~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP 317 (339)
T 1z57_A 242 ---HLAMMERIL-GPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDP 317 (339)
T ss_dssp ---HHHHHHHHH-CSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSST
T ss_pred ---HHHHHHHHh-CCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCc
Confidence 000000000 00000 0000011223457899999999999
Q ss_pred CCCCCHHHHHHHHHHhcc
Q 011005 460 KSRPTMQSVSQEFLITRK 477 (496)
Q Consensus 460 ~~Rps~~evl~~~~~~~~ 477 (496)
++|||+.|+++|+|+...
T Consensus 318 ~~Rpt~~ell~hp~f~~~ 335 (339)
T 1z57_A 318 AKRITLREALKHPFFDLL 335 (339)
T ss_dssp TTSCCHHHHTTSGGGGGG
T ss_pred ccccCHHHHhcCHHHHHH
Confidence 999999999999999753
No 200
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=3.7e-42 Score=331.97 Aligned_cols=266 Identities=20% Similarity=0.285 Sum_probs=199.1
Q ss_pred HhCCCCcceeeecCCeeEEEEEe-CCCcEEEEEEcccch--hHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEE
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLI 280 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV 280 (496)
.++|++.+.||+|+||.||+|.. .+++.||+|++.... .......+.+|+.++++++||||+++++++...+..++|
T Consensus 31 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 110 (310)
T 2wqm_A 31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIV 110 (310)
T ss_dssp GGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred ccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEE
Confidence 35799999999999999999975 578999999987532 334456788999999999999999999999999999999
Q ss_pred EEecCCCChhhhhhCCC-CCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEcccccccccc
Q 011005 281 YEYMERGSLFCNLHNNE-DAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLH 359 (496)
Q Consensus 281 ~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 359 (496)
|||+++++|.+++.... ....+++..++.++.|++.||.||| +.+++||||||+||+++.++.++|+|||++....
T Consensus 111 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~ 187 (310)
T 2wqm_A 111 LELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFS 187 (310)
T ss_dssp EECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCC-------
T ss_pred EecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHh---hCCeeCCCCcHHHEEEcCCCCEEEEeccceeeec
Confidence 99999999999886421 1235899999999999999999999 7799999999999999999999999999998765
Q ss_pred CCCCCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChh
Q 011005 360 ADSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRK 439 (496)
Q Consensus 360 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 439 (496)
..........|++.|+|||.+.+..++.++||||||+++|+|++|+.||.... ...............+.....
T Consensus 188 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~~- 261 (310)
T 2wqm_A 188 SKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDK-----MNLYSLCKKIEQCDYPPLPSD- 261 (310)
T ss_dssp -----------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC--------CCHHHHHHHHHTTCSCCCCTT-
T ss_pred CCCccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccc-----hhHHHHHHHhhcccCCCCccc-
Confidence 44433445678999999999999999999999999999999999999985321 111111111222222211111
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCCC
Q 011005 440 VIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTPL 480 (496)
Q Consensus 440 ~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~~ 480 (496)
.....+.+++.+||+.||++|||+.++++.+........
T Consensus 262 --~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~~ 300 (310)
T 2wqm_A 262 --HYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTA 300 (310)
T ss_dssp --TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred --ccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhhh
Confidence 112247789999999999999999999999877665443
No 201
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=3.4e-42 Score=332.68 Aligned_cols=262 Identities=23% Similarity=0.359 Sum_probs=202.3
Q ss_pred HhCCCCcceeeecCCeeEEEEEeCCCcEEEEEEcccch-hHHHHHHHHHHHHHHHhhc--ccccccccceeecCCeEEEE
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSE-ELAFIKSFKNEAQVLSQVL--HRNIVKLYGYCLHKKCMFLI 280 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~--h~niv~~~~~~~~~~~~~lV 280 (496)
.++|.+.+.||+|+||.||+|..++++.||+|.+.... .....+.+.+|+.++++++ |+||+++++++..+...++|
T Consensus 27 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 106 (313)
T 3cek_A 27 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 106 (313)
T ss_dssp TEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEEE
T ss_pred cceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEEE
Confidence 46799999999999999999998889999999986542 3344577899999999997 59999999999999999999
Q ss_pred EEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccC
Q 011005 281 YEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHA 360 (496)
Q Consensus 281 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 360 (496)
|| +.+++|.+++.... .+++..++.++.|++.||.||| +.+++||||||+||++++ +.+||+|||+++....
T Consensus 107 ~e-~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~~~ 178 (313)
T 3cek_A 107 ME-CGNIDLNSWLKKKK---SIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIVD-GMLKLIDFGIANQMQP 178 (313)
T ss_dssp EC-CCSEEHHHHHHHCS---SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEET-TEEEECCCSSSCC---
T ss_pred Ee-cCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCcccEEEEC-CeEEEeeccccccccC
Confidence 99 66889999998654 6899999999999999999999 679999999999999975 7999999999987644
Q ss_pred CCCC--cccccccccccccccccc-----------CCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhh
Q 011005 361 DSSN--RTLLAGTYGYIAPELAYT-----------MVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDV 427 (496)
Q Consensus 361 ~~~~--~~~~~gt~~y~aPE~~~~-----------~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~ 427 (496)
.... .....|++.|+|||.+.+ ..++.++||||||+++|+|++|+.||.... .........
T Consensus 179 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~------~~~~~~~~~ 252 (313)
T 3cek_A 179 DTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII------NQISKLHAI 252 (313)
T ss_dssp -----------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCC------SHHHHHHHH
T ss_pred ccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHH------HHHHHHHHH
Confidence 3221 234568999999999875 468889999999999999999999986321 111122222
Q ss_pred hcCCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCCCCC
Q 011005 428 LDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTPLVK 482 (496)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~~~~ 482 (496)
............. ...+.+++.+||+.||++|||+.|+++|+|+........
T Consensus 253 ~~~~~~~~~~~~~---~~~l~~li~~~l~~dp~~Rps~~ell~h~~~~~~~~~~~ 304 (313)
T 3cek_A 253 IDPNHEIEFPDIP---EKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVN 304 (313)
T ss_dssp HCTTSCCCCCCCS---CHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHCC-----
T ss_pred HhcccccCCcccc---hHHHHHHHHHHccCCcccCcCHHHHhcCccccCCCCchh
Confidence 2222211111111 124778999999999999999999999999987655433
No 202
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=1e-41 Score=333.60 Aligned_cols=273 Identities=23% Similarity=0.347 Sum_probs=211.9
Q ss_pred cHHHHHHHHhCCCCcceeeecCCeeEEEEEeCCCcEEEEEEcccchhHHHHHHHHHHHHHHHh--hcccccccccceeec
Q 011005 196 VYEDLIEATEDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQ--VLHRNIVKLYGYCLH 273 (496)
Q Consensus 196 ~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~~~~~~~~ 273 (496)
...-.....++|.+.+.||+|+||.||+|.+ +++.||||.+.... ...+.+|.+++.. ++||||+++++++..
T Consensus 33 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~----~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~ 107 (342)
T 1b6c_B 33 PLLVQRTIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE----ERSWFREAEIYQTVMLRHENILGFIAADNK 107 (342)
T ss_dssp CHHHHHHHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGGG----HHHHHHHHHHHHHSCCCCTTBCCEEEEEEC
T ss_pred ceeecccccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCchh----HHHHHHHHHHHHHhhcCCCcEEEEEeeecc
Confidence 3334455678999999999999999999988 58999999997543 2556788888888 689999999999988
Q ss_pred CC----eEEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCC-----CCCeEEeCCCCCceEecCC
Q 011005 274 KK----CMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDC-----SPSIIHRDISSNNILLNSK 344 (496)
Q Consensus 274 ~~----~~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~-----~~~i~H~dlkp~Nil~~~~ 344 (496)
.. ..++||||+++|+|.+++... .+++..++.++.|++.||.|||+.. +.+|+||||||+||+++.+
T Consensus 108 ~~~~~~~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~ 183 (342)
T 1b6c_B 108 DNGTWTQLWLVSDYHEHGSLFDYLNRY----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKN 183 (342)
T ss_dssp CCSSCCCEEEEECCCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTT
T ss_pred cCCccceeEEEEeecCCCcHHHHHhcc----CccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCC
Confidence 76 789999999999999999754 5899999999999999999999311 3589999999999999999
Q ss_pred CCeEEccccccccccCCCCC----ccccccccccccccccccC------CcCcccchhhHHHHHHHHHhC----------
Q 011005 345 LEAFVADFGTARLLHADSSN----RTLLAGTYGYIAPELAYTM------VMTEKCDVYSFGVVTLEVLMG---------- 404 (496)
Q Consensus 345 ~~~kl~Dfg~~~~~~~~~~~----~~~~~gt~~y~aPE~~~~~------~~~~~~DvwslG~il~el~~g---------- 404 (496)
+.+||+|||++......... .....||+.|+|||++.+. .++.++||||||+++|||++|
T Consensus 184 ~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~ 263 (342)
T 1b6c_B 184 GTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDY 263 (342)
T ss_dssp SCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCC
T ss_pred CCEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCccccc
Confidence 99999999999876544321 2345789999999998876 344789999999999999999
Q ss_pred CCCCccccccCCCCCCcchhHhhhcCCCCCCCChh--HHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCC
Q 011005 405 KHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRK--VIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTP 479 (496)
Q Consensus 405 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~ 479 (496)
..||...... .................+..... .......+.+++.+||+.||++|||+.|+++++....+..
T Consensus 264 ~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~~~ 338 (342)
T 1b6c_B 264 QLPYYDLVPS--DPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 338 (342)
T ss_dssp CCTTTTTSCS--SCCHHHHHHHHTTSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred ccCccccCcC--cccHHHHHHHHHHHHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHHh
Confidence 6676532211 01111112222223333222221 1234456889999999999999999999999998776544
No 203
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=8.3e-42 Score=329.95 Aligned_cols=259 Identities=22% Similarity=0.360 Sum_probs=195.9
Q ss_pred HHhCCCCcceeeecCCeeEEEEEeC----CCcEEEEEEcccch-hHHHHHHHHHHHHHHHhhcccccccccceeecCC--
Q 011005 203 ATEDFDIRYCIGTGGYGSVYKAQLP----NGKVFALKKLHTSE-ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKK-- 275 (496)
Q Consensus 203 ~~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-- 275 (496)
..++|.+.+.||+|+||.||+|.+. .++.||+|.+.... .....+.+.+|+.++++++||||+++++++....
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 111 (313)
T 3brb_A 32 DRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQ 111 (313)
T ss_dssp CGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC----
T ss_pred CHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeecccc
Confidence 3567889999999999999999653 34589999987543 3344567899999999999999999999998755
Q ss_pred ---eEEEEEEecCCCChhhhhhCC---CCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEE
Q 011005 276 ---CMFLIYEYMERGSLFCNLHNN---EDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFV 349 (496)
Q Consensus 276 ---~~~lV~e~~~~g~L~~~l~~~---~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl 349 (496)
..++||||+++|+|.+++... .....+++..++.++.||+.||.||| +.+|+||||||+||+++.++.+||
T Consensus 112 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dikp~NIli~~~~~~kl 188 (313)
T 3brb_A 112 GIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLS---NRNFLHRDLAARNCMLRDDMTVCV 188 (313)
T ss_dssp ---CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHH---TTTCCCCCCSGGGEEECTTSCEEE
T ss_pred CCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCcceEEEcCCCcEEE
Confidence 359999999999999998532 22346899999999999999999999 789999999999999999999999
Q ss_pred ccccccccccCCCC--CccccccccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccCCCCCCcchhHh
Q 011005 350 ADFGTARLLHADSS--NRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSSDPKIMLID 426 (496)
Q Consensus 350 ~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~ 426 (496)
+|||+++....... ......+++.|+|||.+.+..++.++||||||+++|+|++ |..||.... .......
T Consensus 189 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~-------~~~~~~~ 261 (313)
T 3brb_A 189 ADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQ-------NHEMYDY 261 (313)
T ss_dssp CSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC-------GGGHHHH
T ss_pred eecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCC-------HHHHHHH
Confidence 99999987643321 1233457889999999999999999999999999999999 889986322 1222222
Q ss_pred hhcCCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHh
Q 011005 427 VLDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLIT 475 (496)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~ 475 (496)
............ ....+.+++.+||+.||++|||+.++++++...
T Consensus 262 ~~~~~~~~~~~~----~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l 306 (313)
T 3brb_A 262 LLHGHRLKQPED----CLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKL 306 (313)
T ss_dssp HHTTCCCCCBTT----CCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHcCCCCCCCcc----ccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 222221111111 123477899999999999999999999998654
No 204
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=2.2e-42 Score=340.71 Aligned_cols=269 Identities=21% Similarity=0.236 Sum_probs=192.5
Q ss_pred HHHHHHHhCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCC-
Q 011005 198 EDLIEATEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKK- 275 (496)
Q Consensus 198 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~- 275 (496)
+......++|++.+.||+|+||+||+|.+. +++.||||++...... .....++++.++.++||||+++++++....
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~ 93 (360)
T 3e3p_A 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRF--RNRELQIMQDLAVLHHPNIVQLQSYFYTLGE 93 (360)
T ss_dssp HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCTTC--CCHHHHHHHHHHHHCCTTBCCEEEEEEEECS
T ss_pred hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCccc--cHHHHHHHHHHHhcCCCCcccHHHhhhcccc
Confidence 345566789999999999999999999774 6899999998654321 234567788888899999999999986533
Q ss_pred ------eEEEEEEecCCCChhhhhh-CCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecC-CCCe
Q 011005 276 ------CMFLIYEYMERGSLFCNLH-NNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNS-KLEA 347 (496)
Q Consensus 276 ------~~~lV~e~~~~g~L~~~l~-~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~-~~~~ 347 (496)
..++||||+++ +|...+. .......+++..+..++.|++.||.|||.. +.+|+||||||+|||++. ++.+
T Consensus 94 ~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~-~~~ivH~Dlkp~NIll~~~~~~~ 171 (360)
T 3e3p_A 94 RDRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLP-SVNVCHRDIKPHNVLVNEADGTL 171 (360)
T ss_dssp SCTTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTST-TTCCBCSCCCGGGEEEETTTTEE
T ss_pred ccccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCC-CCCeecCcCCHHHEEEeCCCCcE
Confidence 37899999987 4443332 122233688999999999999999999943 569999999999999997 8999
Q ss_pred EEccccccccccCCCCCccccccccccccccccccCC-cCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHh
Q 011005 348 FVADFGTARLLHADSSNRTLLAGTYGYIAPELAYTMV-MTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLID 426 (496)
Q Consensus 348 kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~ 426 (496)
||+|||+++...... ......||+.|+|||++.+.. ++.++||||||+++|+|++|+.||..... ......
T Consensus 172 kl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~-------~~~~~~ 243 (360)
T 3e3p_A 172 KLCDFGSAKKLSPSE-PNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNS-------AGQLHE 243 (360)
T ss_dssp EECCCTTCBCCCTTS-CCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-------HHHHHH
T ss_pred EEeeCCCceecCCCC-CcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCCh-------HHHHHH
Confidence 999999998765433 233457899999999987654 89999999999999999999999964321 111111
Q ss_pred hhc--------------CCCC---------CCCC----hhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccC
Q 011005 427 VLD--------------QRLP---------PPVD----RKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKT 478 (496)
Q Consensus 427 ~~~--------------~~~~---------~~~~----~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~ 478 (496)
... .... .+.. .........+.+|+.+||+.||++|||+.|+++|+|+....
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~ 322 (360)
T 3e3p_A 244 IVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDELH 322 (360)
T ss_dssp HHHHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTSGGGGGGG
T ss_pred HHHHcCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcCccccccC
Confidence 100 0000 0000 00000234578999999999999999999999999998754
No 205
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=7.3e-42 Score=339.57 Aligned_cols=267 Identities=22% Similarity=0.308 Sum_probs=204.6
Q ss_pred HHhCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchhHHHHHHHHHHHHHHHhhc-cc-----ccccccceeecCC
Q 011005 203 ATEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVL-HR-----NIVKLYGYCLHKK 275 (496)
Q Consensus 203 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~-h~-----niv~~~~~~~~~~ 275 (496)
..++|++.+.||+|+||+||+|... +++.||||++.... .....+.+|+.+++.++ |+ +|+++++++...+
T Consensus 52 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~ 129 (382)
T 2vx3_A 52 WMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKK--AFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRN 129 (382)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSH--HHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETT
T ss_pred eeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccH--HHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCC
Confidence 3578999999999999999999765 68899999997643 23466788999998885 44 4999999999999
Q ss_pred eEEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEec--CCCCeEEcccc
Q 011005 276 CMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLN--SKLEAFVADFG 353 (496)
Q Consensus 276 ~~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~--~~~~~kl~Dfg 353 (496)
..++||||+. |+|.+++..... ..+++..+..++.|++.||.|||+. ..+|+||||||+|||++ .++.+||+|||
T Consensus 130 ~~~lv~e~~~-~~L~~~l~~~~~-~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~DFG 206 (382)
T 2vx3_A 130 HLCLVFEMLS-YNLYDLLRNTNF-RGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVDFG 206 (382)
T ss_dssp EEEEEEECCC-CBHHHHHHHTTT-SCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEECCCT
T ss_pred ceEEEEecCC-CCHHHHHhhcCc-CCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEEecc
Confidence 9999999996 599999886532 2589999999999999999999953 46999999999999995 47789999999
Q ss_pred ccccccCCCCCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCC--------CCCCc----
Q 011005 354 TARLLHADSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSS--------SSDPK---- 421 (496)
Q Consensus 354 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~--------~~~~~---- 421 (496)
+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||........ ...+.
T Consensus 207 ~a~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 283 (382)
T 2vx3_A 207 SSCQLGQR---IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILD 283 (382)
T ss_dssp TCEETTCC---CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHT
T ss_pred Cceecccc---cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHH
Confidence 99876432 2346789999999999999999999999999999999999999974321100 00000
Q ss_pred --chhHhhhcCC----------------CCCC----------------------CChhHHHHHHHHHHHHHhcccCCCCC
Q 011005 422 --IMLIDVLDQR----------------LPPP----------------------VDRKVIRDILLISTVSFACLQSNPKS 461 (496)
Q Consensus 422 --~~~~~~~~~~----------------~~~~----------------------~~~~~~~~~~~l~~li~~cl~~dP~~ 461 (496)
......+... ...+ .......+...+.+|+.+||+.||++
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~ 363 (382)
T 2vx3_A 284 QAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKT 363 (382)
T ss_dssp TCTTHHHHEEECTTSCEEECCCCTTCCCSCCTTCSCHHHHHTTTTTSGGGTTTTCTTCCHHHHHHHHHHHHHHTCSCTTT
T ss_pred hhHHHHHHHHhccccccccccccccccccCCcchhhHHHHhhccccCCCccccccccccchhhHHHHHHHHHhcCCChhh
Confidence 0000000000 0000 00001122346789999999999999
Q ss_pred CCCHHHHHHHHHHhcc
Q 011005 462 RPTMQSVSQEFLITRK 477 (496)
Q Consensus 462 Rps~~evl~~~~~~~~ 477 (496)
|||++|+++|+|+...
T Consensus 364 Rpta~e~L~hp~f~~~ 379 (382)
T 2vx3_A 364 RIQPYYALQHSFFKKT 379 (382)
T ss_dssp SCCHHHHTTSGGGCC-
T ss_pred CCCHHHHhcCcccccC
Confidence 9999999999999754
No 206
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=3.1e-42 Score=340.79 Aligned_cols=262 Identities=24% Similarity=0.284 Sum_probs=199.5
Q ss_pred HhCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccch-hHHHHHHHHHHHHHHHhhcccccccccceeecCCeE----
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSE-ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCM---- 277 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~---- 277 (496)
.++|.+.+.||+|+||.||+|.+. +|+.||+|++.... .....+.+.+|+.+++.++||||+++++++...+..
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 120 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 120 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCC
T ss_pred cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccce
Confidence 468999999999999999999764 68999999997643 334457788999999999999999999999876654
Q ss_pred --EEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEcccccc
Q 011005 278 --FLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTA 355 (496)
Q Consensus 278 --~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~ 355 (496)
++||||+. ++|.+.+.. .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++
T Consensus 121 ~~~lv~e~~~-~~l~~~~~~-----~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a 191 (371)
T 4exu_A 121 DFYLVMPFMQ-TDLQKIMGM-----EFSEEKIQYLVYQMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLA 191 (371)
T ss_dssp CCEEEEECCC-EEHHHHTTS-----CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECSTTCC
T ss_pred eEEEEEcccc-ccHHHHhhc-----CCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCcCHHHeEECCCCCEEEEecCcc
Confidence 99999997 588877743 4899999999999999999999 679999999999999999999999999999
Q ss_pred ccccCCCCCcccccccccccccccccc-CCcCcccchhhHHHHHHHHHhCCCCCccccccCC---------CC-------
Q 011005 356 RLLHADSSNRTLLAGTYGYIAPELAYT-MVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSS---------SS------- 418 (496)
Q Consensus 356 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~---------~~------- 418 (496)
+..... .....||+.|+|||++.+ ..++.++||||+|+++|+|++|+.||........ ..
T Consensus 192 ~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 268 (371)
T 4exu_A 192 RHADAE---MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQK 268 (371)
T ss_dssp -----------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTT
T ss_pred cccccC---cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHH
Confidence 865332 334578999999999887 7889999999999999999999999964321000 00
Q ss_pred CCcchhHhhhcCCCCCCCC---hhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhcc
Q 011005 419 DPKIMLIDVLDQRLPPPVD---RKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRK 477 (496)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~ 477 (496)
................... .........+.+|+.+||+.||++|||++|+++|+|+...
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~ 330 (371)
T 4exu_A 269 LNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPF 330 (371)
T ss_dssp CSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTT
T ss_pred hhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcCcccccC
Confidence 0000000000000000000 0000112357899999999999999999999999999754
No 207
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=4.3e-42 Score=326.33 Aligned_cols=254 Identities=25% Similarity=0.391 Sum_probs=203.6
Q ss_pred HhCCCCcceeeecCCeeEEEEEeCCCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEe
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEY 283 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~ 283 (496)
.++|++.+.||+|+||.||+|..++++.||+|.+...... .+.+.+|++++++++||||+++++++.. +..++||||
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~ 88 (279)
T 1qpc_A 12 RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS--PDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEY 88 (279)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTSSC--HHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEEC
T ss_pred HHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCccc--HHHHHHHHHHHHhCCCcCcceEEEEEcC-CCcEEEEec
Confidence 4678999999999999999999988889999999765422 3678899999999999999999999874 457899999
Q ss_pred cCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCC
Q 011005 284 MERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSS 363 (496)
Q Consensus 284 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 363 (496)
+++++|.+++.... ...+++..++.++.|++.||.||| +.+++||||||+||+++.++.+||+|||++........
T Consensus 89 ~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 164 (279)
T 1qpc_A 89 MENGSLVDFLKTPS-GIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEY 164 (279)
T ss_dssp CTTCBHHHHTTSHH-HHTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCE
T ss_pred CCCCCHHHHHhcCC-CCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHhhEEEcCCCCEEECCCcccccccCccc
Confidence 99999999987532 125899999999999999999999 77999999999999999999999999999987654322
Q ss_pred C-ccccccccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHH
Q 011005 364 N-RTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVI 441 (496)
Q Consensus 364 ~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (496)
. .....+++.|+|||.+.+..++.++||||||+++|+|++ |+.||.... ........... .......
T Consensus 165 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~-------~~~~~~~~~~~-~~~~~~~--- 233 (279)
T 1qpc_A 165 TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMT-------NPEVIQNLERG-YRMVRPD--- 233 (279)
T ss_dssp ECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCC-------HHHHHHHHHTT-CCCCCCT---
T ss_pred ccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccC-------HHHHHHHHhcc-cCCCCcc---
Confidence 1 223456788999999999999999999999999999999 999986321 11111222111 1111111
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHh
Q 011005 442 RDILLISTVSFACLQSNPKSRPTMQSVSQEFLIT 475 (496)
Q Consensus 442 ~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~ 475 (496)
.....+.+++.+||+.||++|||++++++.+...
T Consensus 234 ~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~ 267 (279)
T 1qpc_A 234 NCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDF 267 (279)
T ss_dssp TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHhccChhhCCCHHHHHHHHHHH
Confidence 1123577899999999999999999998877543
No 208
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=4.8e-42 Score=330.95 Aligned_cols=260 Identities=23% Similarity=0.306 Sum_probs=199.3
Q ss_pred HhCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccch--hHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEE
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLI 280 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV 280 (496)
.++|.+.+.||+|+||.||+|.+. +++.||+|.+.... .....+.+.+|+.++++++||||+++++++..++..++|
T Consensus 33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 112 (309)
T 2h34_A 33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVD 112 (309)
T ss_dssp -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEE
Confidence 478999999999999999999765 68899999997643 233457789999999999999999999999999999999
Q ss_pred EEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccC
Q 011005 281 YEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHA 360 (496)
Q Consensus 281 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 360 (496)
|||+++++|.+++.... .+++..++.++.|++.||.||| +.+|+||||||+||+++.++.+||+|||++.....
T Consensus 113 ~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~ 186 (309)
T 2h34_A 113 MRLINGVDLAAMLRRQG---PLAPPRAVAIVRQIGSALDAAH---AAGATHRDVKPENILVSADDFAYLVDFGIASATTD 186 (309)
T ss_dssp EECCCCEEHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECSCCC------
T ss_pred EEecCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---HCcCCcCCCChHHEEEcCCCCEEEecCccCccccc
Confidence 99999999999998643 6899999999999999999999 67999999999999999999999999999977644
Q ss_pred CCC-CccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChh
Q 011005 361 DSS-NRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRK 439 (496)
Q Consensus 361 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 439 (496)
... ......|++.|+|||.+.+..++.++||||||+++|+|++|+.||..... ......+....+.+. ..
T Consensus 187 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--------~~~~~~~~~~~~~~~-~~ 257 (309)
T 2h34_A 187 EKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQL--------SVMGAHINQAIPRPS-TV 257 (309)
T ss_dssp ----------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHH--------HHHHHHHHSCCCCGG-GT
T ss_pred cccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchH--------HHHHHHhccCCCCcc-cc
Confidence 322 22345689999999999999999999999999999999999999963221 112222222222110 00
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCC-CHHHHHHHHHHhccC
Q 011005 440 VIRDILLISTVSFACLQSNPKSRP-TMQSVSQEFLITRKT 478 (496)
Q Consensus 440 ~~~~~~~l~~li~~cl~~dP~~Rp-s~~evl~~~~~~~~~ 478 (496)
.......+.+++.+||+.||++|| |++++++.+...-..
T Consensus 258 ~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~ 297 (309)
T 2h34_A 258 RPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALAT 297 (309)
T ss_dssp STTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC-
T ss_pred CCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHh
Confidence 111122477899999999999999 899999988765443
No 209
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=5.2e-42 Score=334.50 Aligned_cols=263 Identities=24% Similarity=0.319 Sum_probs=179.9
Q ss_pred HHhCCCCcc-eeeecCCeeEEEEEeC-CCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeec----CCe
Q 011005 203 ATEDFDIRY-CIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLH----KKC 276 (496)
Q Consensus 203 ~~~~~~~~~-~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~----~~~ 276 (496)
..++|.+.+ .||+|+||+||+|.++ +++.||+|++..... ...+....++.+.||||+++++++.. +..
T Consensus 26 ~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-----~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~ 100 (336)
T 3fhr_A 26 VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPK-----ARQEVDHHWQASGGPHIVCILDVYENMHHGKRC 100 (336)
T ss_dssp GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSHH-----HHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEE
T ss_pred ccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcHH-----HHHHHHHHHHhcCCCChHHHHHHHhhccCCCce
Confidence 357888855 6999999999999775 689999999876432 11222334566689999999999876 456
Q ss_pred EEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecC---CCCeEEcccc
Q 011005 277 MFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNS---KLEAFVADFG 353 (496)
Q Consensus 277 ~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~---~~~~kl~Dfg 353 (496)
.++||||+++|+|.+++..... ..+++..++.++.|++.||.||| +.+|+||||||+||+++. ++.+||+|||
T Consensus 101 ~~lv~e~~~gg~L~~~l~~~~~-~~l~~~~~~~i~~ql~~~l~~LH---~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg 176 (336)
T 3fhr_A 101 LLIIMECMEGGELFSRIQERGD-QAFTEREAAEIMRDIGTAIQFLH---SHNIAHRDVKPENLLYTSKEKDAVLKLTDFG 176 (336)
T ss_dssp EEEEEECCTTEEHHHHHHTC-C-CCCBHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSTTCCEEECCCT
T ss_pred EEEEEeccCCCCHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEEecCCCceEEEeccc
Confidence 8999999999999999986532 36899999999999999999999 679999999999999986 4559999999
Q ss_pred ccccccCCCCCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCC
Q 011005 354 TARLLHADSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLP 433 (496)
Q Consensus 354 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (496)
+++..... ......+|+.|+|||++.+..++.++||||+|+++|+|++|+.||................ .......+
T Consensus 177 ~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~-~~~~~~~~ 253 (336)
T 3fhr_A 177 FAKETTQN--ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRI-RLGQYGFP 253 (336)
T ss_dssp TCEEC------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC----------------------CCC
T ss_pred cceecccc--ccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhh-hccccccC
Confidence 99866432 2334578999999999999999999999999999999999999996433211100000000 00001111
Q ss_pred CCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCCC
Q 011005 434 PPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTPL 480 (496)
Q Consensus 434 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~~ 480 (496)
.+... .....+.+++.+||+.||++|||++|+++|+|+......
T Consensus 254 ~~~~~---~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~~ 297 (336)
T 3fhr_A 254 NPEWS---EVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQSMVV 297 (336)
T ss_dssp TTTST---TCCHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHTGGGS
T ss_pred chhhc---cCCHHHHHHHHHHCCCChhHCcCHHHHhcCccccccccC
Confidence 11101 112347789999999999999999999999999875443
No 210
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=9.1e-43 Score=346.19 Aligned_cols=258 Identities=24% Similarity=0.317 Sum_probs=197.3
Q ss_pred HHHhCCCCcceeeecCCeeEEEEEe-CCCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeec-------
Q 011005 202 EATEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLH------- 273 (496)
Q Consensus 202 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~------- 273 (496)
...++|++.+.||+|+||+||+|.+ .+|+.||+|++..... ...+|+++++.++||||+++++++..
T Consensus 4 ~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~-----~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~ 78 (383)
T 3eb0_A 4 TSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR-----YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPK 78 (383)
T ss_dssp --CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT-----SCCHHHHHHTTCCCTTBCCEEEEEEEC------
T ss_pred cccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc-----hHHHHHHHHHHcCCCCccchhheeeecCccccc
Confidence 3467899999999999999999975 5799999999876532 23479999999999999999999843
Q ss_pred -------------------------------CCeEEEEEEecCCCChhhhhhCC-CCCccCCHHHHHHHHHHHHHHHHHH
Q 011005 274 -------------------------------KKCMFLIYEYMERGSLFCNLHNN-EDAVELDWAKRVNIVKAMAHALAYL 321 (496)
Q Consensus 274 -------------------------------~~~~~lV~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~i~~~i~~~l~~l 321 (496)
....++||||+++ +|.+.+... .....+++..+..++.||+.||.||
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~L 157 (383)
T 3eb0_A 79 PPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD-TLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFI 157 (383)
T ss_dssp -------------------------------CCEEEEEECCCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccCCCceEEEEEEecCCc-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 3348899999984 777666531 1223689999999999999999999
Q ss_pred HhCCCCCeEEeCCCCCceEec-CCCCeEEccccccccccCCCCCccccccccccccccccccC-CcCcccchhhHHHHHH
Q 011005 322 HHDCSPSIIHRDISSNNILLN-SKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYTM-VMTEKCDVYSFGVVTL 399 (496)
Q Consensus 322 h~~~~~~i~H~dlkp~Nil~~-~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~ 399 (496)
| +.||+||||||+||+++ .++.+||+|||+++...... ......+|+.|+|||++.+. .++.++||||+||++|
T Consensus 158 H---~~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ 233 (383)
T 3eb0_A 158 H---SLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSE-PSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFG 233 (383)
T ss_dssp H---TTTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTS-CCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHH
T ss_pred H---HCcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCC-CCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHH
Confidence 9 78999999999999997 68899999999998764433 33445789999999998875 4899999999999999
Q ss_pred HHHhCCCCCccccccCCCCCCcchhHhhhc--------------C-----CCCCCCChhHH-----HHHHHHHHHHHhcc
Q 011005 400 EVLMGKHPRDILSSLSSSSDPKIMLIDVLD--------------Q-----RLPPPVDRKVI-----RDILLISTVSFACL 455 (496)
Q Consensus 400 el~~g~~p~~~~~~~~~~~~~~~~~~~~~~--------------~-----~~~~~~~~~~~-----~~~~~l~~li~~cl 455 (496)
||++|+.||...... .....++. . ..+........ .....+.+|+.+||
T Consensus 234 ell~g~~pf~~~~~~-------~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L 306 (383)
T 3eb0_A 234 ELILGKPLFSGETSI-------DQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQIL 306 (383)
T ss_dssp HHHHSSCSSCCSSHH-------HHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHC
T ss_pred HHHhCCCCCCCCChH-------HHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHc
Confidence 999999999643211 00111000 0 00000000000 01234779999999
Q ss_pred cCCCCCCCCHHHHHHHHHHhc
Q 011005 456 QSNPKSRPTMQSVSQEFLITR 476 (496)
Q Consensus 456 ~~dP~~Rps~~evl~~~~~~~ 476 (496)
+.||++|||+.|+++|+|+..
T Consensus 307 ~~dP~~R~t~~e~l~hp~f~~ 327 (383)
T 3eb0_A 307 RYEPDLRINPYEAMAHPFFDH 327 (383)
T ss_dssp CSSGGGSCCHHHHHTSGGGHH
T ss_pred cCChhhCCCHHHHhcCHHHHH
Confidence 999999999999999999864
No 211
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=1.4e-42 Score=333.54 Aligned_cols=256 Identities=26% Similarity=0.455 Sum_probs=196.7
Q ss_pred HHhCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeec--------
Q 011005 203 ATEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLH-------- 273 (496)
Q Consensus 203 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-------- 273 (496)
..++|++.+.||+|+||.||+|... +++.||+|.+.... ...+.+.+|+.++++++||||+++++++.+
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 81 (303)
T 1zy4_A 4 YASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTE--EKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPM 81 (303)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEEH--HHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC--
T ss_pred ccccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEeccH--HHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhh
Confidence 4578999999999999999999764 78999999996543 334678999999999999999999998754
Q ss_pred -----CCeEEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeE
Q 011005 274 -----KKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAF 348 (496)
Q Consensus 274 -----~~~~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~k 348 (496)
....++||||+++|+|.+++.... ..+++..++.++.|++.||+||| +.+++||||||+||+++.++.+|
T Consensus 82 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dlkp~Nil~~~~~~~k 156 (303)
T 1zy4_A 82 TAVKKKSTLFIQMEYCENGTLYDLIHSEN--LNQQRDEYWRLFRQILEALSYIH---SQGIIHRDLKPMNIFIDESRNVK 156 (303)
T ss_dssp ----CEEEEEEEEECCCSCBHHHHHHHSC--GGGCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEE
T ss_pred cccccCCceEEEEecCCCCCHHHhhhccc--cccchHHHHHHHHHHHHHHHHHH---hCCeecccCCHHhEEEcCCCCEE
Confidence 456899999999999999998543 35788999999999999999999 67999999999999999999999
Q ss_pred EccccccccccCCC--------------CCccccccccccccccccccC-CcCcccchhhHHHHHHHHHhCCCCCccccc
Q 011005 349 VADFGTARLLHADS--------------SNRTLLAGTYGYIAPELAYTM-VMTEKCDVYSFGVVTLEVLMGKHPRDILSS 413 (496)
Q Consensus 349 l~Dfg~~~~~~~~~--------------~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~el~~g~~p~~~~~~ 413 (496)
|+|||++....... .......||+.|+|||.+.+. .++.++||||+|+++|+|++ ||.....
T Consensus 157 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~~ 233 (303)
T 1zy4_A 157 IGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGME 233 (303)
T ss_dssp ECCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHHH
T ss_pred EeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCchh
Confidence 99999998664321 122345689999999999865 68999999999999999998 4431110
Q ss_pred cCCCCCCcchhHhhhc--CCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhcc
Q 011005 414 LSSSSDPKIMLIDVLD--QRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRK 477 (496)
Q Consensus 414 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~ 477 (496)
.......... ...+..... .....+.+++.+||+.||++|||+.|+++|+|+...
T Consensus 234 ------~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~ 290 (303)
T 1zy4_A 234 ------RVNILKKLRSVSIEFPPDFDD---NKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWLPVK 290 (303)
T ss_dssp ------HHHHHHHHHSTTCCCCTTCCT---TTSHHHHHHHHHHTCSSGGGSCCHHHHHHSSCSCCC
T ss_pred ------HHHHHHhccccccccCccccc---cchHHHHHHHHHHHhcCcccCcCHHHHhCCCCcCCC
Confidence 0011111111 111221111 112346789999999999999999999999998643
No 212
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=2.8e-42 Score=336.68 Aligned_cols=260 Identities=23% Similarity=0.361 Sum_probs=193.1
Q ss_pred HhCCCCcceeeecCCeeEEEEEeCCCcEEEEEEcccchhHHHHHHHHHHHHH--HHhhcccccccccceee-----cCCe
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQV--LSQVLHRNIVKLYGYCL-----HKKC 276 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~--l~~l~h~niv~~~~~~~-----~~~~ 276 (496)
.++|++.+.||+|+||+||+|.. +++.||||++..... ..+..|.++ +..++||||+++++.+. ....
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~----~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 86 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFANR----QNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRME 86 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGGH----HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEE
T ss_pred hHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccch----hhHHHHHHHHHHHhccCcchhhheecccccccCCCce
Confidence 36799999999999999999987 689999999976543 233344444 44578999999997543 2346
Q ss_pred EEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCC---------CeEEeCCCCCceEecCCCCe
Q 011005 277 MFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSP---------SIIHRDISSNNILLNSKLEA 347 (496)
Q Consensus 277 ~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~---------~i~H~dlkp~Nil~~~~~~~ 347 (496)
.++||||+++|+|.+++... ..++..+..++.||+.||+||| +. +|+||||||+|||++.++.+
T Consensus 87 ~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~qi~~~L~~LH---~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~ 159 (336)
T 3g2f_A 87 YLLVMEYYPNGSLXKYLSLH----TSDWVSSCRLAHSVTRGLAYLH---TELPRGDHYKPAISHRDLNSRNVLVKNDGTC 159 (336)
T ss_dssp EEEEECCCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHH---CCBCCGGGCBCCEECSSCSGGGEEECTTSCE
T ss_pred EEEEEecCCCCcHHHHHhhc----ccchhHHHHHHHHHHHHHHHHH---hhhccccccccceeecccccceEEEcCCCcE
Confidence 78999999999999999765 3588999999999999999999 67 99999999999999999999
Q ss_pred EEccccccccccCCC--------CCcccccccccccccccccc-------CCcCcccchhhHHHHHHHHHhCCCCCcccc
Q 011005 348 FVADFGTARLLHADS--------SNRTLLAGTYGYIAPELAYT-------MVMTEKCDVYSFGVVTLEVLMGKHPRDILS 412 (496)
Q Consensus 348 kl~Dfg~~~~~~~~~--------~~~~~~~gt~~y~aPE~~~~-------~~~~~~~DvwslG~il~el~~g~~p~~~~~ 412 (496)
||+|||+++...... .......||+.|+|||++.+ ..++.++||||||+++|||++|..||....
T Consensus 160 kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~ 239 (336)
T 3g2f_A 160 VISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGE 239 (336)
T ss_dssp EECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTS
T ss_pred EEeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCcc
Confidence 999999998764321 11223569999999999987 466789999999999999999987764322
Q ss_pred ccCCCCCC---------c-chhHh-hhcC----CCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhc
Q 011005 413 SLSSSSDP---------K-IMLID-VLDQ----RLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITR 476 (496)
Q Consensus 413 ~~~~~~~~---------~-~~~~~-~~~~----~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~ 476 (496)
........ . ..... .... .++..... .......+.+++.+||+.||++|||++|+++.+....
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll 317 (336)
T 3g2f_A 240 SVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKE-NSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELM 317 (336)
T ss_dssp CCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCC-CSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred chhHHHHhhhcccCCCchHHHHHhhhcccccCCCCCccccc-ccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHH
Confidence 21110000 0 00000 1111 11111111 1223445889999999999999999999988876543
No 213
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=1.6e-42 Score=342.15 Aligned_cols=257 Identities=18% Similarity=0.264 Sum_probs=197.0
Q ss_pred HhCCCCcceeeecCCeeEEEEEeCC------CcEEEEEEcccchhHH--H--------HHHHHHHHHHHHhhcccccccc
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLPN------GKVFALKKLHTSEELA--F--------IKSFKNEAQVLSQVLHRNIVKL 267 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~--~--------~~~~~~e~~~l~~l~h~niv~~ 267 (496)
.++|.+.+.||+|+||+||+|.++. ++.||||.+....... + ......|+..++.++||||+++
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~ 113 (364)
T 3op5_A 34 AAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKY 113 (364)
T ss_dssp CCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCE
T ss_pred CCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeE
Confidence 4589999999999999999998764 4789999987643210 0 0123345556677789999999
Q ss_pred cceeecC----CeEEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEec-
Q 011005 268 YGYCLHK----KCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLN- 342 (496)
Q Consensus 268 ~~~~~~~----~~~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~- 342 (496)
++++... ...++||||+ +++|.+++.... ..+++..++.++.||+.||+||| +.+|+||||||+|||++
T Consensus 114 ~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~--~~l~~~~~~~i~~qi~~~l~~lH---~~~iiHrDlkp~Nill~~ 187 (364)
T 3op5_A 114 WGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANA--KRFSRKTVLQLSLRILDILEYIH---EHEYVHGDIKASNLLLNY 187 (364)
T ss_dssp EEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTT--SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEES
T ss_pred EeeeeeccCCcceEEEEEeCC-CCCHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeEEecCCHHHEEEec
Confidence 9998764 4589999999 999999997642 36899999999999999999999 67999999999999999
Q ss_pred -CCCCeEEccccccccccCCCCC-------ccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCcccccc
Q 011005 343 -SKLEAFVADFGTARLLHADSSN-------RTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSL 414 (496)
Q Consensus 343 -~~~~~kl~Dfg~~~~~~~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~ 414 (496)
.++.+||+|||+++.+...... .....||+.|+|||++.+..++.++||||||+++|||++|+.||.....
T Consensus 188 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~- 266 (364)
T 3op5_A 188 KNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLK- 266 (364)
T ss_dssp SCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTT-
T ss_pred CCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCcccccc-
Confidence 8899999999999876433211 1334599999999999999999999999999999999999999974211
Q ss_pred CCCCCCcc----------hhHhhhcCCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhcc
Q 011005 415 SSSSDPKI----------MLIDVLDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRK 477 (496)
Q Consensus 415 ~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~ 477 (496)
.... ......+..++.. ..+..+.+++..||+.||++||+++++++.+...-.
T Consensus 267 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~ 329 (364)
T 3op5_A 267 ----DPKYVRDSKIRYRENIASLMDKCFPAA------NAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLK 329 (364)
T ss_dssp ----CHHHHHHHHHHHHHCHHHHHHHHSCTT------CCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHH
T ss_pred ----CHHHHHHHHHHhhhhHHHHHHHhcccc------cCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHH
Confidence 0000 0011111111100 012357889999999999999999999988765544
No 214
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=4.9e-42 Score=333.63 Aligned_cols=259 Identities=24% Similarity=0.359 Sum_probs=203.1
Q ss_pred HhCCCCcceeeecCCeeEEEEEeC-CCcE--EEEEEcccchhHHHHHHHHHHHHHHHhh-cccccccccceeecCCeEEE
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLP-NGKV--FALKKLHTSEELAFIKSFKNEAQVLSQV-LHRNIVKLYGYCLHKKCMFL 279 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~--vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~l 279 (496)
.++|++.+.||+|+||.||+|.+. ++.. +|+|.+.........+.+.+|+.+++++ +||||+++++++...+..++
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~l 103 (327)
T 1fvr_A 24 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL 103 (327)
T ss_dssp GGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEE
T ss_pred HHHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEE
Confidence 367999999999999999999764 4554 4999987655444556789999999999 89999999999999999999
Q ss_pred EEEecCCCChhhhhhCCC-------------CCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCC
Q 011005 280 IYEYMERGSLFCNLHNNE-------------DAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLE 346 (496)
Q Consensus 280 V~e~~~~g~L~~~l~~~~-------------~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~ 346 (496)
||||+++|+|.+++.... ....+++..++.++.||+.||.||| +.+|+||||||+||+++.++.
T Consensus 104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~~~~~ 180 (327)
T 1fvr_A 104 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYV 180 (327)
T ss_dssp EECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECGGGC
T ss_pred EEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCccceEEEcCCCe
Confidence 999999999999998653 2236899999999999999999999 779999999999999999999
Q ss_pred eEEccccccccccCCCCCccccccccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccCCCCCCcchhH
Q 011005 347 AFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSSDPKIMLI 425 (496)
Q Consensus 347 ~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~ 425 (496)
+||+|||+++..... .......+++.|+|||++.+..++.++||||+|+++|+|++ |+.||.... ......
T Consensus 181 ~kL~Dfg~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~-------~~~~~~ 252 (327)
T 1fvr_A 181 AKIADFGLSRGQEVY-VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMT-------CAELYE 252 (327)
T ss_dssp EEECCTTCEESSCEE-CCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCC-------HHHHHH
T ss_pred EEEcccCcCcccccc-ccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCc-------HHHHHH
Confidence 999999999754322 12233456889999999999999999999999999999998 999986322 111112
Q ss_pred hhhcCCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhcc
Q 011005 426 DVLDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRK 477 (496)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~ 477 (496)
......... ... .....+.+++.+||+.||++|||++|+++++.....
T Consensus 253 ~~~~~~~~~-~~~---~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 300 (327)
T 1fvr_A 253 KLPQGYRLE-KPL---NCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLE 300 (327)
T ss_dssp HGGGTCCCC-CCT---TBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HhhcCCCCC-CCC---CCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 222211111 111 112347789999999999999999999999876544
No 215
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=1.9e-42 Score=330.45 Aligned_cols=252 Identities=22% Similarity=0.396 Sum_probs=200.6
Q ss_pred HhCCCCcceeeecCCeeEEEEEeCC-C-------cEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCC
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLPN-G-------KVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKK 275 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~~-~-------~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~ 275 (496)
.++|.+.+.||+|+||+||+|.+.. + ..||+|.+..... ...+.+.+|+.++++++||||+++++++..++
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 85 (289)
T 4fvq_A 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHR-NYSESFFEAASMMSKLSHKHLVLNYGVCVCGD 85 (289)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGG-GGHHHHHHHHHHHHTSCCTTBCCEEEEECCTT
T ss_pred hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccH-HHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCC
Confidence 3678999999999999999996543 3 5799999866442 34467899999999999999999999999999
Q ss_pred eEEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCC--------e
Q 011005 276 CMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLE--------A 347 (496)
Q Consensus 276 ~~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~--------~ 347 (496)
..++||||+++|+|.+++.... ..+++..++.++.||+.||.||| +.+|+||||||+||+++.++. +
T Consensus 86 ~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~ 160 (289)
T 4fvq_A 86 ENILVQEFVKFGSLDTYLKKNK--NCINILWKLEVAKQLAAAMHFLE---ENTLIHGNVCAKNILLIREEDRKTGNPPFI 160 (289)
T ss_dssp CCEEEEECCTTCBHHHHHHHTG--GGCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEEECCBGGGTBCCEE
T ss_pred CCEEEEECCCCCCHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHh---hCCeECCCcCcceEEEecCCccccccccee
Confidence 9999999999999999998643 24899999999999999999999 779999999999999998887 9
Q ss_pred EEccccccccccCCCCCcccccccccccccccccc-CCcCcccchhhHHHHHHHHHhCCCC-CccccccCCCCCCcchhH
Q 011005 348 FVADFGTARLLHADSSNRTLLAGTYGYIAPELAYT-MVMTEKCDVYSFGVVTLEVLMGKHP-RDILSSLSSSSDPKIMLI 425 (496)
Q Consensus 348 kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~el~~g~~p-~~~~~~~~~~~~~~~~~~ 425 (496)
||+|||++..... .....+|+.|+|||++.+ ..++.++||||+|+++|+|++|..| +... ......
T Consensus 161 kl~Dfg~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~--------~~~~~~ 228 (289)
T 4fvq_A 161 KLSDPGISITVLP----KDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSAL--------DSQRKL 228 (289)
T ss_dssp EECCCCSCTTTSC----HHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTS--------CHHHHH
T ss_pred eeccCcccccccC----ccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCcccc--------chHHHH
Confidence 9999999865422 233568889999999987 7789999999999999999996544 4321 111111
Q ss_pred hhhcC--CCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCCC
Q 011005 426 DVLDQ--RLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTPL 480 (496)
Q Consensus 426 ~~~~~--~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~~ 480 (496)
..... ..+.... ..+.+++.+||+.||++|||+.|+++++...-....
T Consensus 229 ~~~~~~~~~~~~~~-------~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p~~ 278 (289)
T 4fvq_A 229 QFYEDRHQLPAPKA-------AELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPDL 278 (289)
T ss_dssp HHHHTTCCCCCCSS-------CTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC----
T ss_pred HHhhccCCCCCCCC-------HHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCCC
Confidence 11111 2222221 136789999999999999999999999987655443
No 216
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.5e-42 Score=347.20 Aligned_cols=268 Identities=22% Similarity=0.321 Sum_probs=186.9
Q ss_pred HhCCCC-cceeeecCCeeEEEEEeC---CCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceee--cCCeE
Q 011005 204 TEDFDI-RYCIGTGGYGSVYKAQLP---NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCL--HKKCM 277 (496)
Q Consensus 204 ~~~~~~-~~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~--~~~~~ 277 (496)
.+.|.+ .++||+|+||+||+|.++ +++.||+|++..... ...+.+|+.++++++||||+++++++. .....
T Consensus 19 ~~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~---~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~ 95 (405)
T 3rgf_A 19 EDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI---SMSACREIALLRELKHPNVISLQKVFLSHADRKV 95 (405)
T ss_dssp HHHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC---CHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEE
T ss_pred hhhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC---CHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeE
Confidence 345666 457999999999999865 578999999976432 245789999999999999999999995 46789
Q ss_pred EEEEEecCCCChhhhhhCC------CCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEe----cCCCCe
Q 011005 278 FLIYEYMERGSLFCNLHNN------EDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILL----NSKLEA 347 (496)
Q Consensus 278 ~lV~e~~~~g~L~~~l~~~------~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~----~~~~~~ 347 (496)
++||||+++ +|.+++... .....+++..++.++.||+.||+||| +.+|+||||||+|||+ +.++.+
T Consensus 96 ~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~ 171 (405)
T 3rgf_A 96 WLLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLH---ANWVLHRDLKPANILVMGEGPERGRV 171 (405)
T ss_dssp EEEEECCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECCSSTTTTCE
T ss_pred EEEEeCCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHH---hCCEeCCCcCHHHeEEecCCCCCCcE
Confidence 999999975 787776532 12225899999999999999999999 7799999999999999 677899
Q ss_pred EEccccccccccCCC---CCccccccccccccccccccC-CcCcccchhhHHHHHHHHHhCCCCCccccccCCCCC--Cc
Q 011005 348 FVADFGTARLLHADS---SNRTLLAGTYGYIAPELAYTM-VMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSD--PK 421 (496)
Q Consensus 348 kl~Dfg~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~--~~ 421 (496)
||+|||+++...... ......+||+.|+|||++.+. .++.++||||+||++|+|++|+.||........... ..
T Consensus 172 kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~ 251 (405)
T 3rgf_A 172 KIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHH 251 (405)
T ss_dssp EECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCH
T ss_pred EEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchH
Confidence 999999998765332 123346789999999999874 589999999999999999999999964322100000 00
Q ss_pred chhHhh---hcCCCCCCCCh----------------------hHHH--------HHHHHHHHHHhcccCCCCCCCCHHHH
Q 011005 422 IMLIDV---LDQRLPPPVDR----------------------KVIR--------DILLISTVSFACLQSNPKSRPTMQSV 468 (496)
Q Consensus 422 ~~~~~~---~~~~~~~~~~~----------------------~~~~--------~~~~l~~li~~cl~~dP~~Rps~~ev 468 (496)
.....+ +.......... .... ....+.+|+.+||+.||++|||++|+
T Consensus 252 ~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~ 331 (405)
T 3rgf_A 252 DQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQA 331 (405)
T ss_dssp HHHHHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred HHHHHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHH
Confidence 000000 00000000000 0000 02246789999999999999999999
Q ss_pred HHHHHHhccC
Q 011005 469 SQEFLITRKT 478 (496)
Q Consensus 469 l~~~~~~~~~ 478 (496)
++|+|+....
T Consensus 332 L~hp~f~~~~ 341 (405)
T 3rgf_A 332 MQDPYFLEDP 341 (405)
T ss_dssp HTSGGGTSSS
T ss_pred hcChhhccCC
Confidence 9999998654
No 217
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=5.1e-42 Score=333.52 Aligned_cols=264 Identities=24% Similarity=0.361 Sum_probs=206.9
Q ss_pred HhCCCCcceeeecCCeeEEEEEe-----CCCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceee--cCCe
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQL-----PNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCL--HKKC 276 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~--~~~~ 276 (496)
.++|++.+.||+|+||.||+|.+ .+++.||+|++..... ...+.+.+|++++++++||||+++++++. ....
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 100 (327)
T 3lxl_A 22 ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGP-DQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQS 100 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCH-HHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCE
T ss_pred hhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCH-HHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCce
Confidence 36799999999999999999983 4688999999976543 33467899999999999999999999886 4567
Q ss_pred EEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccc
Q 011005 277 MFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTAR 356 (496)
Q Consensus 277 ~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~ 356 (496)
.++||||+++++|.+++.... ..+++..++.++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++.
T Consensus 101 ~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~ 175 (327)
T 3lxl_A 101 LRLVMEYLPSGCLRDFLQRHR--ARLDASRLLLYSSQICKGMEYLG---SRRCVHRDLAARNILVESEAHVKIADFGLAK 175 (327)
T ss_dssp EEEEEECCTTCBHHHHHHHHG--GGCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCGGGCE
T ss_pred EEEEEeecCCCCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCChhhEEECCCCCEEEcccccce
Confidence 899999999999999997532 25899999999999999999999 7799999999999999999999999999998
Q ss_pred cccCCCCC---ccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCcccccc-----C--CCCCCcchhHh
Q 011005 357 LLHADSSN---RTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSL-----S--SSSDPKIMLID 426 (496)
Q Consensus 357 ~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~-----~--~~~~~~~~~~~ 426 (496)
........ .....+|+.|+|||++.+..++.++||||+|+++|+|++|+.||...... . ...........
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (327)
T 3lxl_A 176 LLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLE 255 (327)
T ss_dssp ECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHH
T ss_pred ecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHH
Confidence 76543321 22345788899999999999999999999999999999999998533211 0 00000011112
Q ss_pred hhcCCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhc
Q 011005 427 VLDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITR 476 (496)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~ 476 (496)
........+... .....+.+++.+||+.||++|||+.|+++++....
T Consensus 256 ~~~~~~~~~~~~---~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~ 302 (327)
T 3lxl_A 256 LLEEGQRLPAPP---ACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLW 302 (327)
T ss_dssp HHHTTCCCCCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC-
T ss_pred HhhcccCCCCCC---cccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 222222111111 11234779999999999999999999999887543
No 218
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=1.8e-42 Score=339.21 Aligned_cols=263 Identities=19% Similarity=0.203 Sum_probs=196.7
Q ss_pred hCCCCcceeeecCCeeEEEEEeC----CCcEEEEEEcccchhHH----------HHHHHHHHHHHHHhhcccccccccce
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLP----NGKVFALKKLHTSEELA----------FIKSFKNEAQVLSQVLHRNIVKLYGY 270 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~----------~~~~~~~e~~~l~~l~h~niv~~~~~ 270 (496)
++|.+.+.||+|+||.||+|.+. .+..||+|.+....... ....+.+|+..++.++||||++++++
T Consensus 37 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~ 116 (345)
T 2v62_A 37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGS 116 (345)
T ss_dssp CEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEE
T ss_pred ceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecc
Confidence 57999999999999999999875 57889999987643110 11235678888999999999999999
Q ss_pred eec----CCeEEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCC-
Q 011005 271 CLH----KKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKL- 345 (496)
Q Consensus 271 ~~~----~~~~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~- 345 (496)
+.. ....++||||+ +++|.+++.... .+++..++.++.||+.||+||| +.+|+||||||+||+++.++
T Consensus 117 ~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~ 189 (345)
T 2v62_A 117 GLTEFKGRSYRFMVMERL-GIDLQKISGQNG---TFKKSTVLQLGIRMLDVLEYIH---ENEYVHGDIKAANLLLGYKNP 189 (345)
T ss_dssp EEEESSSCEEEEEEEECE-EEEHHHHCBGGG---BCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEESSST
T ss_pred cccccCCCcEEEEEEecc-CCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCcCHHHEEEccCCC
Confidence 987 67899999999 999999998654 7899999999999999999999 67999999999999999887
Q ss_pred -CeEEccccccccccCCCC-------CccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCC
Q 011005 346 -EAFVADFGTARLLHADSS-------NRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSS 417 (496)
Q Consensus 346 -~~kl~Dfg~~~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~ 417 (496)
.+||+|||+++.+..... ......||+.|+|||++.+..++.++||||||+++|||++|+.||..... .
T Consensus 190 ~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~---~ 266 (345)
T 2v62_A 190 DQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLK---D 266 (345)
T ss_dssp TSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTT---C
T ss_pred CcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCcccccc---c
Confidence 999999999987643211 12345789999999999999999999999999999999999999963211 0
Q ss_pred CCCcchhHhhhcCCCCCCCChhH--HHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhcc
Q 011005 418 SDPKIMLIDVLDQRLPPPVDRKV--IRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRK 477 (496)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~ 477 (496)
..............++....... ......+.+++.+||+.||++|||++++++.+.....
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~ 328 (345)
T 2v62_A 267 PVAVQTAKTNLLDELPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHGI 328 (345)
T ss_dssp HHHHHHHHHHHHHTTTHHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTCC
T ss_pred cHHHHHHHHhhcccccHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccCC
Confidence 00000011111111111000000 0112257899999999999999999999999876544
No 219
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=1.1e-42 Score=349.38 Aligned_cols=262 Identities=23% Similarity=0.318 Sum_probs=195.3
Q ss_pred hCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecC------CeE
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHK------KCM 277 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~------~~~ 277 (496)
.+|++.+.||+|+||.||+|.+. +++.||||++..... ...+|++++++++||||+++++++... ...
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~-----~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~ 128 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYL 128 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT-----SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEE
T ss_pred ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch-----hHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeE
Confidence 46889999999999999999875 689999999866432 235799999999999999999988532 246
Q ss_pred EEEEEecCCCChhhhhhC-CCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCC-CCeEEcccccc
Q 011005 278 FLIYEYMERGSLFCNLHN-NEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSK-LEAFVADFGTA 355 (496)
Q Consensus 278 ~lV~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~-~~~kl~Dfg~~ 355 (496)
++||||+++ ++.+.+.. ......+++..+..++.||+.||.||| +.+|+||||||+|||++.+ +.+||+|||++
T Consensus 129 ~lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NILl~~~~~~~kl~DFG~a 204 (420)
T 1j1b_A 129 NLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSA 204 (420)
T ss_dssp EEEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCSGGGEEEETTTTEEEECCCTTC
T ss_pred Eeehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChhhEEEeCCCCeEEeccchhh
Confidence 799999986 56555432 112236899999999999999999999 7899999999999999965 56899999999
Q ss_pred ccccCCCCCccccccccccccccccccC-CcCcccchhhHHHHHHHHHhCCCCCccccccCC--------CCCCcchhHh
Q 011005 356 RLLHADSSNRTLLAGTYGYIAPELAYTM-VMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSS--------SSDPKIMLID 426 (496)
Q Consensus 356 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~--------~~~~~~~~~~ 426 (496)
+...... .....+||+.|+|||++.+. .++.++||||+||++|||++|+.||........ ..........
T Consensus 205 ~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~~~ 283 (420)
T 1j1b_A 205 KQLVRGE-PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE 283 (420)
T ss_dssp EECCTTC-CCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHHH
T ss_pred hhcccCC-CceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHh
Confidence 8764432 23345789999999998765 789999999999999999999999964321000 0000000000
Q ss_pred hhcC-----CCCCCCChhHH-----HHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhcc
Q 011005 427 VLDQ-----RLPPPVDRKVI-----RDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRK 477 (496)
Q Consensus 427 ~~~~-----~~~~~~~~~~~-----~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~ 477 (496)
... ..+......+. .....+.+|+.+||+.||++|||+.|+++|+|+...
T Consensus 284 -~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~hp~f~~~ 343 (420)
T 1j1b_A 284 -MNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL 343 (420)
T ss_dssp -HCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGG
T ss_pred -hChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCCHhhccc
Confidence 000 01100000000 012357899999999999999999999999999653
No 220
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=1.2e-41 Score=329.50 Aligned_cols=264 Identities=21% Similarity=0.349 Sum_probs=203.7
Q ss_pred HhCCCCcceeeecCCeeEEEEEe-CCCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceee----cCCeEE
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCL----HKKCMF 278 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~----~~~~~~ 278 (496)
.++|++.+.||+|+||.||+|.. .+++.||+|.+.... ....+.+.+|+.+++.++||||+++++++. .....+
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 106 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHE-QQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAW 106 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESS-HHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCC-HHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeE
Confidence 36799999999999999999976 578999999886543 234567889999999999999999999987 345789
Q ss_pred EEEEecCCCChhhhhhCCC-CCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEcccccccc
Q 011005 279 LIYEYMERGSLFCNLHNNE-DAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARL 357 (496)
Q Consensus 279 lV~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 357 (496)
+||||+++|+|.+++.... ....+++..++.++.|++.||.||| +.+++||||||+||+++.++.++|+|||++..
T Consensus 107 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~ 183 (317)
T 2buj_A 107 LLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIH---AKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQ 183 (317)
T ss_dssp EEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCSSCEE
T ss_pred EEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEcCCCCEEEEecCcchh
Confidence 9999999999999887521 2236899999999999999999999 67999999999999999999999999999876
Q ss_pred ccCCCCC---------ccccccccccccccccccCC---cCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhH
Q 011005 358 LHADSSN---------RTLLAGTYGYIAPELAYTMV---MTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLI 425 (496)
Q Consensus 358 ~~~~~~~---------~~~~~gt~~y~aPE~~~~~~---~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~ 425 (496)
....... .....||+.|+|||++.+.. ++.++||||||+++|+|++|+.||....... . ...
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~-----~-~~~ 257 (317)
T 2buj_A 184 ACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKG-----D-SVA 257 (317)
T ss_dssp SCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTT-----S-CHH
T ss_pred cccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhccc-----c-hhh
Confidence 5321111 11235789999999987654 6889999999999999999999996432110 0 111
Q ss_pred hhhcCCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCCC
Q 011005 426 DVLDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTPL 480 (496)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~~ 480 (496)
.........+... .....+.+++.+||+.||++|||+.|+++++......+.
T Consensus 258 ~~~~~~~~~~~~~---~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~~~ 309 (317)
T 2buj_A 258 LAVQNQLSIPQSP---RHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPPAP 309 (317)
T ss_dssp HHHHCC--CCCCT---TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCCCCC
T ss_pred HHhhccCCCCccc---cCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCCCCC
Confidence 1111111111111 112247789999999999999999999999987765433
No 221
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=1.9e-42 Score=336.52 Aligned_cols=262 Identities=24% Similarity=0.268 Sum_probs=182.7
Q ss_pred hCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchhHHHHHHHHHHHH-HHHhhcccccccccceeecCCeEEEEEE
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFKNEAQ-VLSQVLHRNIVKLYGYCLHKKCMFLIYE 282 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~-~l~~l~h~niv~~~~~~~~~~~~~lV~e 282 (496)
++|.+.+.||+|+||.||+|..+ +++.||||.+...........+..|+. +++.++||||+++++++...+..++|||
T Consensus 22 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~e 101 (327)
T 3aln_A 22 EDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICME 101 (327)
T ss_dssp CSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred HHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEEe
Confidence 67899999999999999999774 789999999977543334455566665 6677799999999999999999999999
Q ss_pred ecCCCChhhhhhCC--CCCccCCHHHHHHHHHHHHHHHHHHHhCCCC-CeEEeCCCCCceEecCCCCeEEcccccccccc
Q 011005 283 YMERGSLFCNLHNN--EDAVELDWAKRVNIVKAMAHALAYLHHDCSP-SIIHRDISSNNILLNSKLEAFVADFGTARLLH 359 (496)
Q Consensus 283 ~~~~g~L~~~l~~~--~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~-~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 359 (496)
|+++ +|.+++... .....+++..+..++.|++.||.||| .. +++||||||+||+++.++.+||+|||+++...
T Consensus 102 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~ 177 (327)
T 3aln_A 102 LMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLK---ENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLV 177 (327)
T ss_dssp CCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHH---HHHSCCCSCCCGGGEEEETTTEEEECCCSSSCC--
T ss_pred ecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHh---ccCCEeECCCCHHHEEEcCCCCEEEccCCCceecc
Confidence 9985 777776531 11236899999999999999999999 66 99999999999999999999999999998764
Q ss_pred CCCCCcccccccccccccccc----ccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCC
Q 011005 360 ADSSNRTLLAGTYGYIAPELA----YTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPP 435 (496)
Q Consensus 360 ~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (496)
... ......||+.|+|||++ .+..++.++||||||+++|+|++|+.||....... ...........+..
T Consensus 178 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~------~~~~~~~~~~~~~~ 250 (327)
T 3aln_A 178 DSI-AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVF------DQLTQVVKGDPPQL 250 (327)
T ss_dssp -----------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-------------CCCCCSCCCCC
T ss_pred ccc-ccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHH------HHHHHHhcCCCCCC
Confidence 332 22334689999999998 46678999999999999999999999996432110 00111111111110
Q ss_pred CChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhcc
Q 011005 436 VDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRK 477 (496)
Q Consensus 436 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~ 477 (496)
...........+.+++.+||+.||++|||+.|+++|+|+...
T Consensus 251 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~~~~~ 292 (327)
T 3aln_A 251 SNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKHPFILMY 292 (327)
T ss_dssp CCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHH
T ss_pred CCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHhChHHHHh
Confidence 000000112247789999999999999999999999999764
No 222
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=7e-42 Score=331.38 Aligned_cols=260 Identities=22% Similarity=0.256 Sum_probs=196.5
Q ss_pred HhCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceee----------
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCL---------- 272 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~---------- 272 (496)
.++|.+.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+.++++++||||+++++++.
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 88 (320)
T 2i6l_A 10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTD-PQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDV 88 (320)
T ss_dssp TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCS-HHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC--
T ss_pred CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCC-hHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccccc
Confidence 467999999999999999999776 48999999987654 334567889999999999999999998873
Q ss_pred ----cCCeEEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEec-CCCCe
Q 011005 273 ----HKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLN-SKLEA 347 (496)
Q Consensus 273 ----~~~~~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~-~~~~~ 347 (496)
.....++||||++ |+|.+++... .+++..++.++.|++.||+||| +.+|+||||||+||+++ +++.+
T Consensus 89 ~~~~~~~~~~lv~e~~~-~~L~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~ 160 (320)
T 2i6l_A 89 GSLTELNSVYIVQEYME-TDLANVLEQG----PLLEEHARLFMYQLLRGLKYIH---SANVLHRDLKPANLFINTEDLVL 160 (320)
T ss_dssp --CCSCSEEEEEEECCS-EEHHHHHTTC----CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEEETTTTEE
T ss_pred ccccccCceeEEeeccC-CCHHHHhhcC----CccHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCeE
Confidence 3467899999998 5999988653 5889999999999999999999 77999999999999997 56799
Q ss_pred EEccccccccccCCC---CCcccccccccccccccccc-CCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcch
Q 011005 348 FVADFGTARLLHADS---SNRTLLAGTYGYIAPELAYT-MVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIM 423 (496)
Q Consensus 348 kl~Dfg~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~ 423 (496)
||+|||+++...... .......+++.|+|||.+.+ ..++.++||||||+++|+|++|+.||...... ..
T Consensus 161 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~-------~~ 233 (320)
T 2i6l_A 161 KIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHEL-------EQ 233 (320)
T ss_dssp EECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH-------HH
T ss_pred EEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHH-------HH
Confidence 999999998764321 12233467899999998865 67899999999999999999999999643211 01
Q ss_pred hHhhhcCC-------------------------CCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccC
Q 011005 424 LIDVLDQR-------------------------LPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKT 478 (496)
Q Consensus 424 ~~~~~~~~-------------------------~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~ 478 (496)
........ ...+...........+.+++.+||+.||++|||++|+++|+|+....
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 313 (320)
T 2i6l_A 234 MQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSHPYMSIYS 313 (320)
T ss_dssp HHHHHHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTSHHHHTTC
T ss_pred HHHHHHhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCCccccccc
Confidence 11110000 00000000001123578999999999999999999999999998654
Q ss_pred C
Q 011005 479 P 479 (496)
Q Consensus 479 ~ 479 (496)
.
T Consensus 314 ~ 314 (320)
T 2i6l_A 314 F 314 (320)
T ss_dssp C
T ss_pred C
Confidence 3
No 223
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=4.9e-42 Score=333.52 Aligned_cols=264 Identities=25% Similarity=0.345 Sum_probs=204.2
Q ss_pred HHhCCCCcceeeecCCeeEEEEEe--CCCcEEEEEEcccchh-HHHHHHHHHHHHHHHhh---cccccccccceee----
Q 011005 203 ATEDFDIRYCIGTGGYGSVYKAQL--PNGKVFALKKLHTSEE-LAFIKSFKNEAQVLSQV---LHRNIVKLYGYCL---- 272 (496)
Q Consensus 203 ~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l---~h~niv~~~~~~~---- 272 (496)
+.++|++.+.||+|+||.||+|.+ .+++.||+|++..... ......+.+|+.+++.+ +||||+++++++.
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~ 88 (326)
T 1blx_A 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 88 (326)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence 457899999999999999999987 4688999999875431 11123456788887777 7999999999987
Q ss_pred -cCCeEEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEcc
Q 011005 273 -HKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVAD 351 (496)
Q Consensus 273 -~~~~~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~D 351 (496)
.....++||||++ |+|.+++..... ..+++..++.++.|++.||.||| +.|++||||||+||+++.++.+||+|
T Consensus 89 ~~~~~~~lv~e~~~-~~L~~~l~~~~~-~~~~~~~~~~~~~qi~~~l~~lH---~~gi~H~dlkp~Nili~~~~~~kl~D 163 (326)
T 1blx_A 89 DRETKLTLVFEHVD-QDLTTYLDKVPE-PGVPTETIKDMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLAD 163 (326)
T ss_dssp SSEEEEEEEEECCS-CBHHHHHHHSCT-TCSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECS
T ss_pred CCCceEEEEEecCC-CCHHHHHHhccc-CCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCCHHHeEEcCCCCEEEec
Confidence 5567899999998 599999876542 25899999999999999999999 77999999999999999999999999
Q ss_pred ccccccccCCCCCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhh---
Q 011005 352 FGTARLLHADSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVL--- 428 (496)
Q Consensus 352 fg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~--- 428 (496)
||+++...... ......||+.|+|||++.+..++.++||||||+++|+|++|+.||...... .....+.
T Consensus 164 fg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-------~~~~~i~~~~ 235 (326)
T 1blx_A 164 FGLARIYSFQM-ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDV-------DQLGKILDVI 235 (326)
T ss_dssp CCSCCCCCGGG-GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-------HHHHHHHHHH
T ss_pred CcccccccCCC-CccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHH-------HHHHHHHHHc
Confidence 99997654322 233457899999999999999999999999999999999999999643210 0000000
Q ss_pred -------------------cCCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCC
Q 011005 429 -------------------DQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTP 479 (496)
Q Consensus 429 -------------------~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~ 479 (496)
......+...........+.+++.+||+.||++|||+.|+++|+|+.....
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~~~ 305 (326)
T 1blx_A 236 GLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLER 305 (326)
T ss_dssp CCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTCCC
T ss_pred CCCCcccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcCccccccch
Confidence 000000000000111234678999999999999999999999999976543
No 224
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=8.7e-42 Score=338.12 Aligned_cols=268 Identities=20% Similarity=0.285 Sum_probs=204.9
Q ss_pred HhCCCCcceeeecCCeeEEEEEe-CCCcEEEEEEcccchhHHHHHHHHHHHHHHHhhc-----------cccccccccee
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVL-----------HRNIVKLYGYC 271 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~-----------h~niv~~~~~~ 271 (496)
.++|.+.+.||+|+||+||+|.+ .+++.||||.+..... ....+.+|+.++++++ |+||+++++++
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~ 95 (373)
T 1q8y_A 18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKV--YTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHF 95 (373)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHH--HHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEE
T ss_pred CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCcc--chhhhhHHHHHHHHhhcccccchhccccchHHHHHHHh
Confidence 36799999999999999999976 5789999999976442 3356789999999886 88999999999
Q ss_pred ecCC----eEEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCC-CeEEeCCCCCceEec----
Q 011005 272 LHKK----CMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSP-SIIHRDISSNNILLN---- 342 (496)
Q Consensus 272 ~~~~----~~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~-~i~H~dlkp~Nil~~---- 342 (496)
...+ ..++|||++ +++|.+++..... ..+++..+..++.||+.||+||| ++ +|+||||||+|||++
T Consensus 96 ~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~-~~~~~~~~~~i~~qi~~aL~~lH---~~~~ivH~Dikp~NIll~~~~~ 170 (373)
T 1q8y_A 96 NHKGPNGVHVVMVFEVL-GENLLALIKKYEH-RGIPLIYVKQISKQLLLGLDYMH---RRCGIIHTDIKPENVLMEIVDS 170 (373)
T ss_dssp EEEETTEEEEEEEECCC-CEEHHHHHHHTTT-SCCCHHHHHHHHHHHHHHHHHHH---HTTCEECSCCSGGGEEEEEEET
T ss_pred hccCCCCceEEEEEecC-CCCHHHHHHHhhc-cCCcHHHHHHHHHHHHHHHHHHH---hcCCEEecCCChHHeEEeccCC
Confidence 8654 789999999 8899999886433 25899999999999999999999 66 999999999999994
Q ss_pred --CCCCeEEccccccccccCCCCCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCC
Q 011005 343 --SKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDP 420 (496)
Q Consensus 343 --~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~ 420 (496)
..+.+||+|||+++..... .....||+.|+|||++.+..++.++||||||+++|||++|+.||.......... .
T Consensus 171 ~~~~~~~kl~Dfg~a~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~-~ 246 (373)
T 1q8y_A 171 PENLIQIKIADLGNACWYDEH---YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTK-D 246 (373)
T ss_dssp TTTEEEEEECCCTTCEETTBC---CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------C-H
T ss_pred CcCcceEEEcccccccccCCC---CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCC-h
Confidence 4457999999999876432 234578999999999999999999999999999999999999997433210000 0
Q ss_pred cchhHhhhc--CCCC------------------------C----CC-------ChhHHHHHHHHHHHHHhcccCCCCCCC
Q 011005 421 KIMLIDVLD--QRLP------------------------P----PV-------DRKVIRDILLISTVSFACLQSNPKSRP 463 (496)
Q Consensus 421 ~~~~~~~~~--~~~~------------------------~----~~-------~~~~~~~~~~l~~li~~cl~~dP~~Rp 463 (496)
......... ...+ . +. ..........+.+|+.+||+.||++||
T Consensus 247 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp 326 (373)
T 1q8y_A 247 DDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRA 326 (373)
T ss_dssp HHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCB
T ss_pred HHHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccC
Confidence 000000000 0000 0 00 000123345688999999999999999
Q ss_pred CHHHHHHHHHHhccCCCCC
Q 011005 464 TMQSVSQEFLITRKTPLVK 482 (496)
Q Consensus 464 s~~evl~~~~~~~~~~~~~ 482 (496)
|++|+++|+|+........
T Consensus 327 t~~ell~hp~f~~~~~~~~ 345 (373)
T 1q8y_A 327 DAGGLVNHPWLKDTLGMEE 345 (373)
T ss_dssp CHHHHHTCGGGTTCTTCTT
T ss_pred CHHHHhhChhhhcccCccc
Confidence 9999999999988655443
No 225
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=1e-41 Score=325.77 Aligned_cols=253 Identities=24% Similarity=0.356 Sum_probs=199.7
Q ss_pred HhCCCCcc-eeeecCCeeEEEEEe---CCCcEEEEEEcccch-hHHHHHHHHHHHHHHHhhcccccccccceeecCCeEE
Q 011005 204 TEDFDIRY-CIGTGGYGSVYKAQL---PNGKVFALKKLHTSE-ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMF 278 (496)
Q Consensus 204 ~~~~~~~~-~lg~G~~g~Vy~~~~---~~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 278 (496)
.++|.+.+ .||+|+||+||+|.+ ..++.||||.+.... .....+.+.+|+.+++.++||||+++++++ ..+..+
T Consensus 15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~ 93 (291)
T 1xbb_A 15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWM 93 (291)
T ss_dssp GGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEE
T ss_pred chhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcE
Confidence 35688877 999999999999954 347889999997653 233457789999999999999999999999 556788
Q ss_pred EEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccc
Q 011005 279 LIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLL 358 (496)
Q Consensus 279 lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 358 (496)
+||||+++++|.+++.... .+++..++.++.|++.||.||| +.+++||||||+||+++.++.+||+|||++...
T Consensus 94 lv~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~ 167 (291)
T 1xbb_A 94 LVMEMAELGPLNKYLQQNR---HVKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL 167 (291)
T ss_dssp EEEECCTTEEHHHHHHHCT---TCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCCTTCEEC
T ss_pred EEEEeCCCCCHHHHHHhCc---CCCHHHHHHHHHHHHHHHHHHH---hCCeEcCCCCcceEEEeCCCcEEEccCCcceee
Confidence 9999999999999998654 5899999999999999999999 679999999999999999999999999999876
Q ss_pred cCCCCC---ccccccccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccCCCCCCcchhHhhhcCCCCC
Q 011005 359 HADSSN---RTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSSDPKIMLIDVLDQRLPP 434 (496)
Q Consensus 359 ~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (496)
...... .....+++.|+|||.+.+..++.++||||||+++|+|++ |+.||..... . .....+......
T Consensus 168 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~-------~-~~~~~~~~~~~~ 239 (291)
T 1xbb_A 168 RADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG-------S-EVTAMLEKGERM 239 (291)
T ss_dssp CTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCH-------H-HHHHHHHTTCCC
T ss_pred ccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCH-------H-HHHHHHHcCCCC
Confidence 543322 122346788999999999899999999999999999999 9999863221 1 122222221111
Q ss_pred CCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHH
Q 011005 435 PVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLI 474 (496)
Q Consensus 435 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~ 474 (496)
.... .....+.+++.+||+.||++|||+.|+++.+..
T Consensus 240 ~~~~---~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~ 276 (291)
T 1xbb_A 240 GCPA---GCPREMYDLMNLCWTYDVENRPGFAAVELRLRN 276 (291)
T ss_dssp CCCT---TCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHH
T ss_pred CCCC---CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 1111 112347789999999999999999999988754
No 226
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=8e-42 Score=358.07 Aligned_cols=250 Identities=24% Similarity=0.355 Sum_probs=195.9
Q ss_pred CCCcc-eeeecCCeeEEEEEeC---CCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEE
Q 011005 207 FDIRY-CIGTGGYGSVYKAQLP---NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYE 282 (496)
Q Consensus 207 ~~~~~-~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e 282 (496)
+.+.+ .||+|+||.||+|.+. ++..||||.++........+.+.+|++++++++||||+++++++.. +..++|||
T Consensus 337 ~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E 415 (613)
T 2ozo_A 337 LLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVME 415 (613)
T ss_dssp EEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEE
T ss_pred eeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEE
Confidence 33444 7999999999999663 5667999999875444445789999999999999999999999976 45899999
Q ss_pred ecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCC
Q 011005 283 YMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADS 362 (496)
Q Consensus 283 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 362 (496)
|+++|+|.+++.... ..+++..++.++.||+.||+||| +++|+||||||+|||++.++.+||+|||+++......
T Consensus 416 ~~~~g~L~~~l~~~~--~~l~~~~~~~i~~qi~~~L~~LH---~~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~ 490 (613)
T 2ozo_A 416 MAGGGPLHKFLVGKR--EEIPVSNVAELLHQVSMGMKYLE---EKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADD 490 (613)
T ss_dssp CCTTCBHHHHHTTCT--TTSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC---
T ss_pred eCCCCcHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHH---HCCEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCC
Confidence 999999999997543 36899999999999999999999 7799999999999999999999999999998764332
Q ss_pred CC---ccccccccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccCCCCCCcchhHhhhcC-CCCCCCC
Q 011005 363 SN---RTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSSDPKIMLIDVLDQ-RLPPPVD 437 (496)
Q Consensus 363 ~~---~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 437 (496)
.. .....+++.|+|||++.+..++.++||||||+++|||++ |+.||.... .......+... ++..+.
T Consensus 491 ~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~-------~~~~~~~i~~~~~~~~p~- 562 (613)
T 2ozo_A 491 SYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMK-------GPEVMAFIEQGKRMECPP- 562 (613)
T ss_dssp -----------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC-------SHHHHHHHHTTCCCCCCT-
T ss_pred ceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCC-------HHHHHHHHHcCCCCCCCC-
Confidence 21 122345688999999999999999999999999999998 999996322 11122222222 121111
Q ss_pred hhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHH
Q 011005 438 RKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLI 474 (496)
Q Consensus 438 ~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~ 474 (496)
.....+.+++.+||+.||++|||+.++++.+..
T Consensus 563 ----~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~ 595 (613)
T 2ozo_A 563 ----ECPPELYALMSDCWIYKWEDRPDFLTVEQRMRA 595 (613)
T ss_dssp ----TCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHH
T ss_pred ----cCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence 112357789999999999999999999766544
No 227
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=1.1e-41 Score=332.49 Aligned_cols=256 Identities=23% Similarity=0.348 Sum_probs=187.2
Q ss_pred hCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchhHHHHHHHHHHHHHHHhhc-ccccccccceee--------cC
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVL-HRNIVKLYGYCL--------HK 274 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~--------~~ 274 (496)
.+|++.+.||+|+||.||+|.+. +++.||+|++..... ...+.+.+|+.+++++. ||||+++++++. ..
T Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~ 106 (337)
T 3ll6_A 28 LRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEE-EKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQ 106 (337)
T ss_dssp EEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSH-HHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSS
T ss_pred ceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCch-HHHHHHHHHHHHHHHhccCCChhhccccccccccccccCC
Confidence 57899999999999999999764 789999999865432 33467889999999996 999999999983 34
Q ss_pred CeEEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCC--eEEeCCCCCceEecCCCCeEEccc
Q 011005 275 KCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPS--IIHRDISSNNILLNSKLEAFVADF 352 (496)
Q Consensus 275 ~~~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~--i~H~dlkp~Nil~~~~~~~kl~Df 352 (496)
...++||||+. |+|.+++........+++..++.++.||+.||.||| ..+ |+||||||+|||++.++.+||+||
T Consensus 107 ~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~~~ivH~Dikp~NIl~~~~~~~kl~Df 182 (337)
T 3ll6_A 107 AEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMH---RQKPPIIHRDLKVENLLLSNQGTIKLCDF 182 (337)
T ss_dssp EEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHH---TSSSCCBCCCCCGGGCEECTTSCEEBCCC
T ss_pred ceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---hCCCCEEEccCCcccEEECCCCCEEEecC
Confidence 46899999996 699888875333346899999999999999999999 667 999999999999999999999999
Q ss_pred cccccccCCCCC------------cccccccccccccccc---ccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCC
Q 011005 353 GTARLLHADSSN------------RTLLAGTYGYIAPELA---YTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSS 417 (496)
Q Consensus 353 g~~~~~~~~~~~------------~~~~~gt~~y~aPE~~---~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~ 417 (496)
|+++........ .....||+.|+|||++ .+..++.++||||||+++|+|++|+.||......
T Consensus 183 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~--- 259 (337)
T 3ll6_A 183 GSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKL--- 259 (337)
T ss_dssp TTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC---------
T ss_pred ccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHH---
Confidence 999876543221 1134589999999998 5677889999999999999999999999643211
Q ss_pred CCCcchhHhhhcCCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCC
Q 011005 418 SDPKIMLIDVLDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTP 479 (496)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~ 479 (496)
.........+..... ...+.+++.+||+.||++|||+.|++++++......
T Consensus 260 --------~~~~~~~~~~~~~~~---~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~~ 310 (337)
T 3ll6_A 260 --------RIVNGKYSIPPHDTQ---YTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAAR 310 (337)
T ss_dssp --------------CCCCTTCCS---SGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred --------HhhcCcccCCccccc---chHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhcc
Confidence 011111111100000 112668899999999999999999999998876543
No 228
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=9.1e-42 Score=344.07 Aligned_cols=254 Identities=23% Similarity=0.284 Sum_probs=190.3
Q ss_pred CCCCcceeeecCCeeEEEEEeCCCcEEEEEEcccchhHHHHHHHHHHHHHHHhh-cccccccccceeecCCeEEEEEEec
Q 011005 206 DFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQV-LHRNIVKLYGYCLHKKCMFLIYEYM 284 (496)
Q Consensus 206 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lV~e~~ 284 (496)
.|...+.||+|+||+||.+...+|+.||||++.... .+.+.+|+.+++++ +||||+++++++..++..++||||+
T Consensus 16 ~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~----~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~ 91 (434)
T 2rio_A 16 LVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDF----CDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELC 91 (434)
T ss_dssp CEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGGG----HHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCC
T ss_pred eeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHHH----HHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecC
Confidence 445567899999999987766789999999986543 24567899999987 7999999999999999999999999
Q ss_pred CCCChhhhhhCCCCCcc----CCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCC-------------CCe
Q 011005 285 ERGSLFCNLHNNEDAVE----LDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSK-------------LEA 347 (496)
Q Consensus 285 ~~g~L~~~l~~~~~~~~----~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~-------------~~~ 347 (496)
. |+|.+++........ .++..++.++.||+.||+||| +.+|+||||||+|||++.+ +.+
T Consensus 92 ~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~ 167 (434)
T 2rio_A 92 N-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRI 167 (434)
T ss_dssp S-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEE
T ss_pred C-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEecCcccccccccCCCceEE
Confidence 6 699999986542211 123345789999999999999 6799999999999999754 489
Q ss_pred EEccccccccccCCCCC----cccccccccccccccccc-------CCcCcccchhhHHHHHHHHHh-CCCCCccccccC
Q 011005 348 FVADFGTARLLHADSSN----RTLLAGTYGYIAPELAYT-------MVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLS 415 (496)
Q Consensus 348 kl~Dfg~~~~~~~~~~~----~~~~~gt~~y~aPE~~~~-------~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~ 415 (496)
||+|||+++........ .....||+.|+|||++.+ ..++.++|||||||++|||++ |+.||.....
T Consensus 168 kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~-- 245 (434)
T 2rio_A 168 LISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYS-- 245 (434)
T ss_dssp EECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTT--
T ss_pred EEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchh--
Confidence 99999999877543221 234579999999999876 678899999999999999999 9999863211
Q ss_pred CCCCCcchhHhhhcCCCCCC--CChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhc
Q 011005 416 SSSDPKIMLIDVLDQRLPPP--VDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITR 476 (496)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~ 476 (496)
. ...........+ ...........+.+++.+||+.||++|||+.|+++|+|+..
T Consensus 246 ----~---~~~i~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~hp~f~~ 301 (434)
T 2rio_A 246 ----R---ESNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLFWP 301 (434)
T ss_dssp ----H---HHHHHHTCCCCCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSC
T ss_pred ----h---HHHHhcCCCCcccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHhCCccCC
Confidence 1 111222211111 11111223345789999999999999999999999999853
No 229
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=1.6e-41 Score=333.67 Aligned_cols=263 Identities=23% Similarity=0.273 Sum_probs=199.6
Q ss_pred HhCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccch-hHHHHHHHHHHHHHHHhhcccccccccceeecCCe-----
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSE-ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKC----- 276 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~----- 276 (496)
.++|.+.+.||+|+||.||+|.++ +|+.||||.+.... .....+.+.+|+.+++.++||||+++++++.....
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 102 (353)
T 3coi_A 23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 102 (353)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccce
Confidence 367899999999999999999764 68999999997643 33345678899999999999999999999987653
Q ss_pred -EEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEcccccc
Q 011005 277 -MFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTA 355 (496)
Q Consensus 277 -~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~ 355 (496)
.++||||+. ++|.+.+.. .+++..+..++.||+.||.||| +.+++||||||+||+++.++.+||+|||++
T Consensus 103 ~~~lv~e~~~-~~l~~~~~~-----~~~~~~~~~i~~qi~~al~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~ 173 (353)
T 3coi_A 103 DFYLVMPFMQ-TDLQKIMGL-----KFSEEKIQYLVYQMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLA 173 (353)
T ss_dssp CCEEEEECCS-EEGGGTTTS-----CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECTTCCEEECSTTCT
T ss_pred eEEEEecccc-CCHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEeECCCCcEEEeecccc
Confidence 499999997 588877643 4899999999999999999999 679999999999999999999999999999
Q ss_pred ccccCCCCCcccccccccccccccccc-CCcCcccchhhHHHHHHHHHhCCCCCccccccCC---------CC-------
Q 011005 356 RLLHADSSNRTLLAGTYGYIAPELAYT-MVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSS---------SS------- 418 (496)
Q Consensus 356 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~---------~~------- 418 (496)
+..... .....+|+.|+|||++.+ ..++.++||||+|+++|+|++|+.||........ ..
T Consensus 174 ~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 250 (353)
T 3coi_A 174 RHADAE---MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQK 250 (353)
T ss_dssp TC-----------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTT
T ss_pred cCCCCC---ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHH
Confidence 765322 234578999999999887 6789999999999999999999999974321000 00
Q ss_pred CCcchhHhhhc---CCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccC
Q 011005 419 DPKIMLIDVLD---QRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKT 478 (496)
Q Consensus 419 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~ 478 (496)
........... .................+.+++.+||+.||++|||++|+++|+|+....
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~~~ 313 (353)
T 3coi_A 251 LNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPFR 313 (353)
T ss_dssp CSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTTC
T ss_pred HhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcCcchhhcc
Confidence 00000000000 0000000000111223578999999999999999999999999997543
No 230
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=4e-41 Score=332.26 Aligned_cols=246 Identities=15% Similarity=0.181 Sum_probs=195.9
Q ss_pred HhCCCCcceeeecCCeeEEEEE------eCCCcEEEEEEcccchhHHHHHHHHHHHHHHHhhc---ccccccccceeecC
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQ------LPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVL---HRNIVKLYGYCLHK 274 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~------~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~~~~~~~~~ 274 (496)
.++|.+.+.||+|+||+||+|. ...++.||+|++..... ..+.+|+.++++++ |+||+++++++...
T Consensus 64 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~----~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~ 139 (365)
T 3e7e_A 64 SKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANP----WEFYIGTQLMERLKPSMQHMFMKFYSAHLFQ 139 (365)
T ss_dssp SSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCCH----HHHHHHHHHHHHSCGGGGGGBCCEEEEEECS
T ss_pred CEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCCh----hHHHHHHHHHHHhhhhhhhhhhhhheeeecC
Confidence 4679999999999999999993 45688999999976542 45677888888876 99999999999999
Q ss_pred CeEEEEEEecCCCChhhhhhCCC--CCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecC---------
Q 011005 275 KCMFLIYEYMERGSLFCNLHNNE--DAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNS--------- 343 (496)
Q Consensus 275 ~~~~lV~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~--------- 343 (496)
+..++||||+++|+|.+++.... ....+++..++.++.||+.||+||| +.+|+||||||+|||++.
T Consensus 140 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH---~~~ivHrDiKp~NIll~~~~~~~~~~~ 216 (365)
T 3e7e_A 140 NGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVH---DCEIIHGDIKPDNFILGNGFLEQDDED 216 (365)
T ss_dssp SCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECGGGTCC----
T ss_pred CCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHh---hCCeecCCCCHHHEEecccccCccccc
Confidence 99999999999999999997421 2336899999999999999999999 789999999999999998
Q ss_pred --CCCeEEccccccccccCC--CCCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCC
Q 011005 344 --KLEAFVADFGTARLLHAD--SSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSD 419 (496)
Q Consensus 344 --~~~~kl~Dfg~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~ 419 (496)
++.+||+|||+++.+... .......+||+.|+|||++.+..++.++|||||||++|||++|+.||......
T Consensus 217 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~----- 291 (365)
T 3e7e_A 217 DLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGG----- 291 (365)
T ss_dssp --CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETT-----
T ss_pred cccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCC-----
Confidence 899999999999765422 22334567999999999999999999999999999999999999998643221
Q ss_pred CcchhHhhhcCCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCC-CHHHHHHHH
Q 011005 420 PKIMLIDVLDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRP-TMQSVSQEF 472 (496)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-s~~evl~~~ 472 (496)
... .......... ...+.+++..|++.+|.+|+ +++++.+.+
T Consensus 292 -~~~----~~~~~~~~~~------~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l 334 (365)
T 3e7e_A 292 -ECK----PEGLFRRLPH------LDMWNEFFHVMLNIPDCHHLPSLDLLRQKL 334 (365)
T ss_dssp -EEE----ECSCCTTCSS------HHHHHHHHHHHHCCCCTTCCCCHHHHHHHH
T ss_pred -cee----echhccccCc------HHHHHHHHHHHcCCCCCCcchHHHHHHHHH
Confidence 000 1111111111 12356788899999999996 555555433
No 231
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=4.2e-41 Score=330.76 Aligned_cols=261 Identities=22% Similarity=0.325 Sum_probs=203.6
Q ss_pred HhCCCCcceeeecCCeeEEEEEeC-CC-cEEEEEEcccchhHHHHHHHHHHHHHHHhhcccc------cccccceeecCC
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLP-NG-KVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRN------IVKLYGYCLHKK 275 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~-~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~n------iv~~~~~~~~~~ 275 (496)
.++|++.+.||+|+||+||+|... ++ +.||+|+++.... ..+.+.+|+.++++++|++ ++.+++++...+
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 95 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGK--YREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHG 95 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCHH--HHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETT
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccccc--chhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCC
Confidence 468999999999999999999764 34 6899999976432 3467789999999998776 889999999999
Q ss_pred eEEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEe--------------
Q 011005 276 CMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILL-------------- 341 (496)
Q Consensus 276 ~~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~-------------- 341 (496)
..++||||+ ++++.+.+..... ..+++..++.++.||+.||+||| +.+|+||||||+|||+
T Consensus 96 ~~~lv~e~~-~~~l~~~l~~~~~-~~~~~~~~~~i~~qi~~~L~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~ 170 (355)
T 2eu9_A 96 HMCIAFELL-GKNTFEFLKENNF-QPYPLPHVRHMAYQLCHALRFLH---ENQLTHTDLKPENILFVNSEFETLYNEHKS 170 (355)
T ss_dssp EEEEEEECC-CCBHHHHHHHTTT-CCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEESCCCEEEEECCC-C
T ss_pred eEEEEEecc-CCChHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEeccccccccccccc
Confidence 999999999 6677777665432 25899999999999999999999 7899999999999999
Q ss_pred -----cCCCCeEEccccccccccCCCCCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCC
Q 011005 342 -----NSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSS 416 (496)
Q Consensus 342 -----~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~ 416 (496)
+.++.+||+|||+++..... .....||+.|+|||++.+..++.++||||+|+++|||++|+.||.......
T Consensus 171 ~~~~~~~~~~~kl~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~- 246 (355)
T 2eu9_A 171 CEEKSVKNTSIRVADFGSATFDHEH---HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENRE- 246 (355)
T ss_dssp CCEEEESCCCEEECCCTTCEETTSC---CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-
T ss_pred ccccccCCCcEEEeecCcccccccc---ccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHH-
Confidence 56789999999999865332 234578999999999999999999999999999999999999996432100
Q ss_pred CCCCcchhHhhhcCCCC---------------------CCC----------------ChhHHHHHHHHHHHHHhcccCCC
Q 011005 417 SSDPKIMLIDVLDQRLP---------------------PPV----------------DRKVIRDILLISTVSFACLQSNP 459 (496)
Q Consensus 417 ~~~~~~~~~~~~~~~~~---------------------~~~----------------~~~~~~~~~~l~~li~~cl~~dP 459 (496)
......... ...+ ... ..........+.+|+.+||+.||
T Consensus 247 ---~~~~~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP 322 (355)
T 2eu9_A 247 ---HLVMMEKIL-GPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDP 322 (355)
T ss_dssp ---HHHHHHHHH-CCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSST
T ss_pred ---HHHHHHHHc-CCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCCh
Confidence 000000000 0000 000 00011123357899999999999
Q ss_pred CCCCCHHHHHHHHHHhccCC
Q 011005 460 KSRPTMQSVSQEFLITRKTP 479 (496)
Q Consensus 460 ~~Rps~~evl~~~~~~~~~~ 479 (496)
++|||+.|+++|+|+..-.+
T Consensus 323 ~~Rpt~~e~l~hp~f~~~~~ 342 (355)
T 2eu9_A 323 AQRITLAEALLHPFFAGLTP 342 (355)
T ss_dssp TTSCCHHHHTTSGGGGGCCH
T ss_pred hhCcCHHHHhcChhhcCCCh
Confidence 99999999999999986543
No 232
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.5e-42 Score=339.20 Aligned_cols=259 Identities=17% Similarity=0.214 Sum_probs=201.3
Q ss_pred hCCCCcceeeecCCeeEEEEEeCC---------CcEEEEEEcccchhHHHHHHHHHHHHHHHhhccccccc---------
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLPN---------GKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVK--------- 266 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~--------- 266 (496)
++|++.+.||+|+||.||+|.+.. ++.||+|.+... +.+.+|++++++++||||++
T Consensus 42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~------~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 115 (352)
T 2jii_A 42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD------GRLFNEQNFFQRAAKPLQVNKWKKLYSTP 115 (352)
T ss_dssp CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT------STHHHHHHHHHHHCCHHHHHHHHHHTTCT
T ss_pred CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc------chHHHHHHHHHHhcccchhhhhhhhccCC
Confidence 579999999999999999998763 789999998754 34679999999999999998
Q ss_pred ------ccceeec-CCeEEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCce
Q 011005 267 ------LYGYCLH-KKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNI 339 (496)
Q Consensus 267 ------~~~~~~~-~~~~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Ni 339 (496)
+++++.. +...++||||+ +++|.+++.... ...+++..++.++.||+.||.||| +.+|+||||||+||
T Consensus 116 ~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~-~~~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dikp~NI 190 (352)
T 2jii_A 116 LLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSP-KHVLSERSVLQVACRLLDALEFLH---ENEYVHGNVTAENI 190 (352)
T ss_dssp TCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSG-GGCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCCGGGE
T ss_pred ccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCC-cCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCHHHE
Confidence 4566655 67889999999 999999998642 236899999999999999999999 67999999999999
Q ss_pred EecCCC--CeEEccccccccccCCCC-------CccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCcc
Q 011005 340 LLNSKL--EAFVADFGTARLLHADSS-------NRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDI 410 (496)
Q Consensus 340 l~~~~~--~~kl~Dfg~~~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~ 410 (496)
+++.++ .+||+|||+++....... ......||+.|+|||++.+..++.++||||||+++|+|++|+.||..
T Consensus 191 l~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~ 270 (352)
T 2jii_A 191 FVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTN 270 (352)
T ss_dssp EEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGG
T ss_pred EEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCccc
Confidence 999998 899999999987643221 12335789999999999999999999999999999999999999974
Q ss_pred ccccCCCCCCcchhHhhh---cCCCCCCCCh--hHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCCC
Q 011005 411 LSSLSSSSDPKIMLIDVL---DQRLPPPVDR--KVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTPL 480 (496)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~--~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~~ 480 (496)
... ......... .......... ........+.+++.+||+.||++|||++++++.+........
T Consensus 271 ~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~ 339 (352)
T 2jii_A 271 CLP------NTEDIMKQKQKFVDKPGPFVGPCGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDLR 339 (352)
T ss_dssp GTT------CHHHHHHHHHHHHHSCCCEECTTSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred CCc------CHHHHHHHHHhccCChhhhhhhccccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhcC
Confidence 321 011111111 1111100000 000012347789999999999999999999999876655433
No 233
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=1.3e-41 Score=345.29 Aligned_cols=259 Identities=17% Similarity=0.263 Sum_probs=201.3
Q ss_pred HhCCCCcceeeecCCeeEEEEEe-CCCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcc-cccccccceeecCCeEEEEE
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLH-RNIVKLYGYCLHKKCMFLIY 281 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h-~niv~~~~~~~~~~~~~lV~ 281 (496)
.++|.+.+.||+|+||.||+|.+ .+++.||||++...... ..+.+|+++++.++| +++..+..++...+..++||
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~---~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvm 82 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH---PQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVM 82 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSS---CCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEE
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccccc---HHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEE
Confidence 46899999999999999999975 57999999987654322 347889999999986 55666666777788899999
Q ss_pred EecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEe---cCCCCeEEccccccccc
Q 011005 282 EYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILL---NSKLEAFVADFGTARLL 358 (496)
Q Consensus 282 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~---~~~~~~kl~Dfg~~~~~ 358 (496)
||+ +++|.+++.... ..+++..++.|+.||+.||+||| ..+|+||||||+|||+ +.++.+||+|||+++.+
T Consensus 83 e~~-g~sL~~ll~~~~--~~l~~~~~~~i~~qi~~aL~yLH---~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~ 156 (483)
T 3sv0_A 83 DLL-GPSLEDLFNFCS--RKLSLKTVLMLADQMINRVEFVH---SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKY 156 (483)
T ss_dssp ECC-CCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEEC
T ss_pred ECC-CCCHHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccCcceEEEecCCCCCeEEEEeCCcceec
Confidence 999 999999997533 26899999999999999999999 7799999999999999 58899999999999877
Q ss_pred cCCCCC-------ccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCC
Q 011005 359 HADSSN-------RTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQR 431 (496)
Q Consensus 359 ~~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 431 (496)
...... .....||+.|+|||++.+..++.++|||||||++|||++|+.||..... .........+....
T Consensus 157 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~----~~~~~~~~~i~~~~ 232 (483)
T 3sv0_A 157 RDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKA----GTKKQKYEKISEKK 232 (483)
T ss_dssp BCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCC----SSHHHHHHHHHHHH
T ss_pred cCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccc----hhHHHHHHHHhhcc
Confidence 544321 2246799999999999999999999999999999999999999974321 11111111111111
Q ss_pred CCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHh
Q 011005 432 LPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLIT 475 (496)
Q Consensus 432 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~ 475 (496)
...............+.+++.+||+.||++||++.++++.+...
T Consensus 233 ~~~~~~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l 276 (483)
T 3sv0_A 233 VATSIEALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDL 276 (483)
T ss_dssp HHSCHHHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHH
T ss_pred ccccHHHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHH
Confidence 11111110111123578999999999999999999998776554
No 234
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=9.9e-42 Score=325.82 Aligned_cols=259 Identities=25% Similarity=0.386 Sum_probs=196.3
Q ss_pred HhCCCCcceeeecCCeeEEEEEeC--CCc--EEEEEEcccch--hHHHHHHHHHHHHHHHhhcccccccccceeecCCeE
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLP--NGK--VFALKKLHTSE--ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCM 277 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~--~~~--~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 277 (496)
.++|++.+.||+|+||+||+|.+. +++ .||+|.++... .....+.+.+|+.++++++||||+++++++..+. .
T Consensus 17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~ 95 (291)
T 1u46_A 17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-M 95 (291)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-C
T ss_pred hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-c
Confidence 367999999999999999999753 333 68999987542 2344577899999999999999999999998765 7
Q ss_pred EEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEcccccccc
Q 011005 278 FLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARL 357 (496)
Q Consensus 278 ~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 357 (496)
++||||+++++|.+++.... ..+++..+..++.|++.||.||| +.+++||||||+||+++.++.+||+|||++..
T Consensus 96 ~~v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~ 170 (291)
T 1u46_A 96 KMVTELAPLGSLLDRLRKHQ--GHFLLGTLSRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRA 170 (291)
T ss_dssp EEEEECCTTCBHHHHHHHHG--GGSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEEEETTEEEECCCTTCEE
T ss_pred eeeEecccCCCHHHHHHhcc--CCcCHHHHHHHHHHHHHHHHHHH---hCCcccCCCchheEEEcCCCCEEEcccccccc
Confidence 89999999999999987542 36899999999999999999999 67999999999999999999999999999987
Q ss_pred ccCCCCC---ccccccccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccCCCCCCcchhHhhhcCCCC
Q 011005 358 LHADSSN---RTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSSDPKIMLIDVLDQRLP 433 (496)
Q Consensus 358 ~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (496)
....... .....+|+.|+|||++.+..++.++||||||+++|+|++ |+.||.... ..............
T Consensus 171 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~-------~~~~~~~~~~~~~~ 243 (291)
T 1u46_A 171 LPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLN-------GSQILHKIDKEGER 243 (291)
T ss_dssp CCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCC-------HHHHHHHHHTSCCC
T ss_pred ccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCC-------HHHHHHHHHccCCC
Confidence 6543322 223457788999999999999999999999999999999 999986322 11222222222111
Q ss_pred CCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccC
Q 011005 434 PPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKT 478 (496)
Q Consensus 434 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~ 478 (496)
.+... .....+.+++.+||+.||++|||+.++++++......
T Consensus 244 ~~~~~---~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 285 (291)
T 1u46_A 244 LPRPE---DCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPT 285 (291)
T ss_dssp CCCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC--
T ss_pred CCCCc---CcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCcc
Confidence 11111 1123477899999999999999999999998776553
No 235
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=1.3e-41 Score=322.83 Aligned_cols=252 Identities=22% Similarity=0.367 Sum_probs=196.5
Q ss_pred HhCCCCcceeeecCCeeEEEEEeCCCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecC-CeEEEEEE
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHK-KCMFLIYE 282 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~-~~~~lV~e 282 (496)
.++|++.+.||+|+||+||+|.++ |+.||+|.+.... ..+.+.+|+.++++++||||+++++++... +..++|||
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~---~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e 95 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA---TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTE 95 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCCC-----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEEC
T ss_pred hhhceEEeEEecCCCceEEEEEEc-CCEEEEEEecchh---HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEe
Confidence 467999999999999999999884 8899999997654 236788999999999999999999987654 47899999
Q ss_pred ecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCC
Q 011005 283 YMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADS 362 (496)
Q Consensus 283 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 362 (496)
|+++++|.+++.... ...+++..++.++.|++.||+||| +.+++||||||+||+++.++.++|+|||++......
T Consensus 96 ~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~- 170 (278)
T 1byg_A 96 YMAKGSLVDYLRSRG-RSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST- 170 (278)
T ss_dssp CCTTEEHHHHHHHHH-HHHCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTSCEEECCCCC--------
T ss_pred cCCCCCHHHHHHhcc-cccCCHHHHHHHHHHHHHHHHHHH---hCCccccCCCcceEEEeCCCcEEEeecccccccccc-
Confidence 999999999997542 113788999999999999999999 779999999999999999999999999999765432
Q ss_pred CCccccccccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHH
Q 011005 363 SNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVI 441 (496)
Q Consensus 363 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (496)
.....+++.|+|||.+.+..++.++||||+|+++|+|++ |+.||.... ....... +..........
T Consensus 171 --~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~-------~~~~~~~-~~~~~~~~~~~--- 237 (278)
T 1byg_A 171 --QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP-------LKDVVPR-VEKGYKMDAPD--- 237 (278)
T ss_dssp -------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSC-------GGGHHHH-HTTTCCCCCCT---
T ss_pred --ccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCC-------HHHHHHH-HhcCCCCCCcc---
Confidence 223457889999999999999999999999999999998 999986321 1111112 21111111111
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhcc
Q 011005 442 RDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRK 477 (496)
Q Consensus 442 ~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~ 477 (496)
.....+.+++.+||+.||++|||+.|+++.+...+.
T Consensus 238 ~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~ 273 (278)
T 1byg_A 238 GCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKT 273 (278)
T ss_dssp TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHh
Confidence 112347789999999999999999999998876544
No 236
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=6.6e-42 Score=353.73 Aligned_cols=254 Identities=27% Similarity=0.417 Sum_probs=204.6
Q ss_pred HhCCCCcceeeecCCeeEEEEEeCCCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEe
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEY 283 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~ 283 (496)
.++|++.+.||+|+||.||+|.++++..||||+++..... .+.+.+|+.++++++|+||+++++++.+ +..++||||
T Consensus 266 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~--~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~ 342 (535)
T 2h8h_A 266 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS--PEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEY 342 (535)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTSSC--HHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECC
T ss_pred hhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCCCC--HHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeeh
Confidence 4678889999999999999999988889999999865422 3578999999999999999999999876 568999999
Q ss_pred cCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCC
Q 011005 284 MERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSS 363 (496)
Q Consensus 284 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 363 (496)
+++|+|.+++.... ...+++..++.++.||+.||+||| +++|+||||||+|||++.++.+||+|||+++.......
T Consensus 343 ~~~gsL~~~l~~~~-~~~l~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~ 418 (535)
T 2h8h_A 343 MSKGSLLDFLKGET-GKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY 418 (535)
T ss_dssp CTTEEHHHHHSHHH-HTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHH
T ss_pred hcCCcHHHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCHhhEEEcCCCcEEEcccccceecCCCce
Confidence 99999999997431 125899999999999999999999 77999999999999999999999999999986643211
Q ss_pred -CccccccccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccCCCCCCcchhHhhhcC-CCCCCCChhH
Q 011005 364 -NRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSSDPKIMLIDVLDQ-RLPPPVDRKV 440 (496)
Q Consensus 364 -~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 440 (496)
......++..|+|||++.+..++.++||||||+++|||++ |+.||.... .......+... +++.+.
T Consensus 419 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~-------~~~~~~~i~~~~~~~~~~---- 487 (535)
T 2h8h_A 419 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMV-------NREVLDQVERGYRMPCPP---- 487 (535)
T ss_dssp HTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCC-------HHHHHHHHHTTCCCCCCT----
T ss_pred ecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC-------HHHHHHHHHcCCCCCCCC----
Confidence 1122346778999999999999999999999999999999 999986321 11122222211 121111
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhc
Q 011005 441 IRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITR 476 (496)
Q Consensus 441 ~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~ 476 (496)
.....+.+|+.+||+.||++|||++++++.+....
T Consensus 488 -~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~ 522 (535)
T 2h8h_A 488 -ECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF 522 (535)
T ss_dssp -TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSS
T ss_pred -CCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence 11234778999999999999999999999887653
No 237
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.7e-41 Score=328.28 Aligned_cols=264 Identities=26% Similarity=0.403 Sum_probs=205.2
Q ss_pred HhCCCCcceeeecCCeeEEEEEe-----CCCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCC--e
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQL-----PNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKK--C 276 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~--~ 276 (496)
.++|++.+.||+|+||.||+|.+ .+++.||+|++..... ...+.+.+|+.++++++||||+++++++...+ .
T Consensus 40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 118 (326)
T 2w1i_A 40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE-EHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN 118 (326)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCS-HHHHHHHHHHHHHHTCCCTTBCCEEEEECC----C
T ss_pred HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCH-HHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCc
Confidence 35688999999999999999973 3688999999976542 34567899999999999999999999987654 6
Q ss_pred EEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccc
Q 011005 277 MFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTAR 356 (496)
Q Consensus 277 ~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~ 356 (496)
.++||||+++++|.+++.... ..+++..++.++.|++.||+||| +.+++||||||+||+++.++.+||+|||++.
T Consensus 119 ~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dikp~NIli~~~~~~kL~Dfg~~~ 193 (326)
T 2w1i_A 119 LKLIMEYLPYGSLRDYLQKHK--ERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTK 193 (326)
T ss_dssp CEEEECCCTTCBHHHHHHHST--TSSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEEEETTEEEECCCTTCE
T ss_pred eEEEEECCCCCCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHH---hCCEeccCCCcceEEEcCCCcEEEecCcchh
Confidence 799999999999999998653 25899999999999999999999 6799999999999999999999999999998
Q ss_pred cccCCCCC---ccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccc-----cCCCCCCcc---hhH
Q 011005 357 LLHADSSN---RTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSS-----LSSSSDPKI---MLI 425 (496)
Q Consensus 357 ~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~-----~~~~~~~~~---~~~ 425 (496)
........ .....++..|+|||.+.+..++.++||||||+++|+|++|..|+..... ......... ...
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (326)
T 2w1i_A 194 VLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI 273 (326)
T ss_dssp ECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHH
T ss_pred hccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHH
Confidence 77544321 2234567789999999999999999999999999999999999763210 000111000 111
Q ss_pred hhhcCCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhc
Q 011005 426 DVLDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITR 476 (496)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~ 476 (496)
+.+......+... .....+.+++.+||+.||++|||+.|+++.+...+
T Consensus 274 ~~~~~~~~~~~~~---~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~ 321 (326)
T 2w1i_A 274 ELLKNNGRLPRPD---GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 321 (326)
T ss_dssp HHHHTTCCCCCCT---TCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHhhcCCCCCCCC---cccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 2222211111111 11235778999999999999999999999887654
No 238
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=5.3e-41 Score=352.67 Aligned_cols=246 Identities=24% Similarity=0.357 Sum_probs=194.6
Q ss_pred ceeeecCCeeEEEEEe---CCCcEEEEEEcccch-hHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEEecCC
Q 011005 211 YCIGTGGYGSVYKAQL---PNGKVFALKKLHTSE-ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYEYMER 286 (496)
Q Consensus 211 ~~lg~G~~g~Vy~~~~---~~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e~~~~ 286 (496)
+.||+|+||+||+|.+ +.++.||||+++... .....+.+.+|+.++++++|||||++++++..+ ..++||||+++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~-~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAE-SWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEESS-SEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC-CEEEEEEccCC
Confidence 4799999999999954 246789999997643 233457799999999999999999999999654 57899999999
Q ss_pred CChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCCC--
Q 011005 287 GSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSN-- 364 (496)
Q Consensus 287 g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~-- 364 (496)
|+|.+++.... .+++..++.++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+++........
T Consensus 454 g~L~~~l~~~~---~l~~~~~~~i~~qi~~~L~yLH---~~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~ 527 (635)
T 4fl3_A 454 GPLNKYLQQNR---HVKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 527 (635)
T ss_dssp EEHHHHHHHCT---TCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC------
T ss_pred CCHHHHHhhCC---CCCHHHHHHHHHHHHHHHHHHH---HCCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccccc
Confidence 99999997654 6899999999999999999999 679999999999999999999999999999877543321
Q ss_pred -ccccccccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHHH
Q 011005 365 -RTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVIR 442 (496)
Q Consensus 365 -~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (496)
.....+|+.|+|||++.+..++.++||||||+++|||++ |+.||.... .. .....+...........
T Consensus 528 ~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~-------~~-~~~~~i~~~~~~~~p~~--- 596 (635)
T 4fl3_A 528 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK-------GS-EVTAMLEKGERMGCPAG--- 596 (635)
T ss_dssp -------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCC-------HH-HHHHHHHTTCCCCCCTT---
T ss_pred cccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCC-------HH-HHHHHHHcCCCCCCCCC---
Confidence 223446788999999999999999999999999999998 999996322 11 12222222211111111
Q ss_pred HHHHHHHHHHhcccCCCCCCCCHHHHHHHHHH
Q 011005 443 DILLISTVSFACLQSNPKSRPTMQSVSQEFLI 474 (496)
Q Consensus 443 ~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~ 474 (496)
....+.+++.+||+.||++|||++++++.+..
T Consensus 597 ~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~ 628 (635)
T 4fl3_A 597 CPREMYDLMNLCWTYDVENRPGFAAVELRLRN 628 (635)
T ss_dssp CCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHH
Confidence 12357789999999999999999999988754
No 239
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.4e-41 Score=326.60 Aligned_cols=255 Identities=22% Similarity=0.348 Sum_probs=196.5
Q ss_pred HHHHHHhCCCCcceeeecCCeeEEEEEe-CCCcEEEEEEcccchhH-----HHHHHHHHHHHHHHhh----ccccccccc
Q 011005 199 DLIEATEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSEEL-----AFIKSFKNEAQVLSQV----LHRNIVKLY 268 (496)
Q Consensus 199 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-----~~~~~~~~e~~~l~~l----~h~niv~~~ 268 (496)
+.....++|++.+.||+|+||.||+|.+ .+++.||+|.+...... .....+.+|+.+++++ +|+||++++
T Consensus 25 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~ 104 (312)
T 2iwi_A 25 DREAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLL 104 (312)
T ss_dssp --------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEE
T ss_pred chhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEE
Confidence 3444668899999999999999999976 46889999999764321 1223456799999999 899999999
Q ss_pred ceeecCCeEEEEEEe-cCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEec-CCCC
Q 011005 269 GYCLHKKCMFLIYEY-MERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLN-SKLE 346 (496)
Q Consensus 269 ~~~~~~~~~~lV~e~-~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~-~~~~ 346 (496)
+++...+..++|||+ +.+++|.+++.... .+++..++.++.||+.||.||| +.+++||||||+||+++ .++.
T Consensus 105 ~~~~~~~~~~~v~e~~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~ 178 (312)
T 2iwi_A 105 DWFETQEGFMLVLERPLPAQDLFDYITEKG---PLGEGPSRCFFGQVVAAIQHCH---SRGVVHRDIKDENILIDLRRGC 178 (312)
T ss_dssp EEC-----CEEEEECCSSEEEHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHH---HHTEECCCCSGGGEEEETTTTE
T ss_pred EEEecCCeEEEEEEecCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCChhhEEEeCCCCe
Confidence 999999999999999 78999999997643 6899999999999999999999 67999999999999999 8899
Q ss_pred eEEccccccccccCCCCCccccccccccccccccccCCcC-cccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhH
Q 011005 347 AFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYTMVMT-EKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLI 425 (496)
Q Consensus 347 ~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~ 425 (496)
+||+|||++...... ......|++.|+|||++.+..+. .++||||+|+++|+|++|+.||....
T Consensus 179 ~kl~dfg~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~------------- 243 (312)
T 2iwi_A 179 AKLIDFGSGALLHDE--PYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ------------- 243 (312)
T ss_dssp EEECCCSSCEECCSS--CBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH-------------
T ss_pred EEEEEcchhhhcccC--cccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChH-------------
Confidence 999999999876543 23445689999999999877764 58999999999999999999986321
Q ss_pred hhhcCCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCC
Q 011005 426 DVLDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTP 479 (496)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~ 479 (496)
+........+.. ....+.+++.+||+.||++|||++|+++|+|+.....
T Consensus 244 ~~~~~~~~~~~~-----~~~~~~~li~~~l~~~p~~Rps~~e~l~~~~~~~~~~ 292 (312)
T 2iwi_A 244 EILEAELHFPAH-----VSPDCCALIRRCLAPKPSSRPSLEEILLDPWMQTPAE 292 (312)
T ss_dssp HHHHTCCCCCTT-----SCHHHHHHHHHHTCSSTTTSCCHHHHHHSTTTCC---
T ss_pred HHhhhccCCccc-----CCHHHHHHHHHHccCChhhCcCHHHHhcChhhcCchh
Confidence 111121111110 1124678999999999999999999999999976543
No 240
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.9e-41 Score=340.86 Aligned_cols=253 Identities=21% Similarity=0.299 Sum_probs=190.4
Q ss_pred hCCCCcceeeecCCeeEEEEEeCCCcEEEEEEcccchhHHHHHHHHHHHHHHHhh-cccccccccceeecCCeEEEEEEe
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQV-LHRNIVKLYGYCLHKKCMFLIYEY 283 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lV~e~ 283 (496)
.+|.+.+.||+|+||+||.....+++.||||++..... ..+.+|+.+++++ +||||+++++++.+....++||||
T Consensus 24 ~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~----~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~ 99 (432)
T 3p23_A 24 ISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF----SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIEL 99 (432)
T ss_dssp EEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTE----EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred EEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH----HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEEC
Confidence 46888899999999997666556899999999865432 2346899999999 799999999999999999999999
Q ss_pred cCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecC-----CCCeEEccccccccc
Q 011005 284 MERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNS-----KLEAFVADFGTARLL 358 (496)
Q Consensus 284 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~-----~~~~kl~Dfg~~~~~ 358 (496)
+. |+|.+++..... ......++.++.||+.||.||| +.+|+||||||+|||++. ...+||+|||+++..
T Consensus 100 ~~-g~L~~~l~~~~~--~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~ 173 (432)
T 3p23_A 100 CA-ATLQEYVEQKDF--AHLGLEPITLLQQTTSGLAHLH---SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKL 173 (432)
T ss_dssp CS-EEHHHHHHSSSC--CCCSSCHHHHHHHHHHHHHHHH---HTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC
T ss_pred CC-CCHHHHHHhcCC--CccchhHHHHHHHHHHHHHHHH---HCcCEeCCCCHHHEEEecCCCCCceeEEEecccceeec
Confidence 96 599999986542 3444556789999999999999 779999999999999953 235789999999876
Q ss_pred cCCC---CCccccccccccccccccc---cCCcCcccchhhHHHHHHHHHh-CCCCCccccccCCCCCCcchhHhhhcCC
Q 011005 359 HADS---SNRTLLAGTYGYIAPELAY---TMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSSDPKIMLIDVLDQR 431 (496)
Q Consensus 359 ~~~~---~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 431 (496)
.... ......+||+.|+|||++. ...++.++||||+||++|||++ |..||.... .. ...... ..
T Consensus 174 ~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~-------~~-~~~~~~-~~ 244 (432)
T 3p23_A 174 AVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSL-------QR-QANILL-GA 244 (432)
T ss_dssp ------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTT-------TH-HHHHHT-TC
T ss_pred cCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhh-------HH-HHHHHh-cc
Confidence 5332 1233467999999999997 4567889999999999999999 999985211 11 111111 11
Q ss_pred CCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhc
Q 011005 432 LPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITR 476 (496)
Q Consensus 432 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~ 476 (496)
...............+.+|+.+||+.||++|||+.|+++|+|+..
T Consensus 245 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~hp~f~~ 289 (432)
T 3p23_A 245 CSLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKHPFFWS 289 (432)
T ss_dssp CCCTTSCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHTSTTTCC
T ss_pred CCccccCccccccHHHHHHHHHHHhCCHhhCCCHHHHHhCccccC
Confidence 111111111122334678999999999999999999999999853
No 241
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=1.6e-41 Score=328.90 Aligned_cols=250 Identities=21% Similarity=0.296 Sum_probs=204.3
Q ss_pred HHhCCCCcceeeecCCeeEEEEEe-CCCcEEEEEEcccchhH-----HHHHHHHHHHHHHHhhc--ccccccccceeecC
Q 011005 203 ATEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSEEL-----AFIKSFKNEAQVLSQVL--HRNIVKLYGYCLHK 274 (496)
Q Consensus 203 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-----~~~~~~~~e~~~l~~l~--h~niv~~~~~~~~~ 274 (496)
..++|++.+.||+|+||.||+|.. .+++.||||.+...... .....+.+|+.++++++ |+||+++++++..+
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~ 120 (320)
T 3a99_A 41 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERP 120 (320)
T ss_dssp CTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECS
T ss_pred ccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecC
Confidence 457899999999999999999975 57899999998764311 11234678999999996 59999999999999
Q ss_pred CeEEEEEEecCC-CChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEec-CCCCeEEccc
Q 011005 275 KCMFLIYEYMER-GSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLN-SKLEAFVADF 352 (496)
Q Consensus 275 ~~~~lV~e~~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~-~~~~~kl~Df 352 (496)
+..++|||++.+ ++|.+++.... .+++..++.++.||+.||+||| +.+|+||||||+||+++ +++.+||+||
T Consensus 121 ~~~~lv~e~~~~~~~L~~~l~~~~---~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~kL~Df 194 (320)
T 3a99_A 121 DSFVLILERPEPVQDLFDFITERG---ALQEELARSFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDF 194 (320)
T ss_dssp SEEEEEEECCSSEEEHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTTEEEECCC
T ss_pred CcEEEEEEcCCCCccHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHH---HCCcEeCCCCHHHEEEeCCCCCEEEeeC
Confidence 999999999986 89999987643 6899999999999999999999 77999999999999999 7889999999
Q ss_pred cccccccCCCCCccccccccccccccccccCCc-CcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCC
Q 011005 353 GTARLLHADSSNRTLLAGTYGYIAPELAYTMVM-TEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQR 431 (496)
Q Consensus 353 g~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 431 (496)
|+++..... ......||+.|+|||++.+..+ +.++||||||+++|||++|+.||..... .....
T Consensus 195 g~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~-------------~~~~~ 259 (320)
T 3a99_A 195 GSGALLKDT--VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE-------------IIRGQ 259 (320)
T ss_dssp TTCEECCSS--CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH-------------HHHCC
T ss_pred ccccccccc--cccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhh-------------hhccc
Confidence 999876432 2334578999999999987766 6789999999999999999999863221 11111
Q ss_pred CCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccC
Q 011005 432 LPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKT 478 (496)
Q Consensus 432 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~ 478 (496)
...+.. ....+.+++.+||+.||++|||++|+++|+|+....
T Consensus 260 ~~~~~~-----~~~~~~~li~~~l~~dp~~Rps~~~ll~hp~~~~~~ 301 (320)
T 3a99_A 260 VFFRQR-----VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVL 301 (320)
T ss_dssp CCCSSC-----CCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSCC
T ss_pred cccccc-----CCHHHHHHHHHHccCChhhCcCHHHHhcCHhhcCcc
Confidence 111110 112477899999999999999999999999997654
No 242
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=4.8e-41 Score=325.32 Aligned_cols=259 Identities=23% Similarity=0.303 Sum_probs=185.2
Q ss_pred HhCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccchhHH-HHHHHHHHHHHHHhhcccccccccceeecCCeEEEEE
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEELA-FIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIY 281 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~ 281 (496)
.++|++.+.||+|+||.||+|.++ +++.||||.+....... ..+.+.++..+++.++||||+++++++..++..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~ 103 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAM 103 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEE
Confidence 467899999999999999999775 78999999997654322 2334455556778889999999999999999999999
Q ss_pred EecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCC-CeEEeCCCCCceEecCCCCeEEccccccccccC
Q 011005 282 EYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSP-SIIHRDISSNNILLNSKLEAFVADFGTARLLHA 360 (496)
Q Consensus 282 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~-~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 360 (496)
||+ ++.+..+.... ...+++..+..++.|++.||.||| .. +++||||||+||+++.++.+||+|||++.....
T Consensus 104 e~~-~~~~~~l~~~~--~~~~~~~~~~~~~~~i~~~l~~lH---~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~ 177 (318)
T 2dyl_A 104 ELM-GTCAEKLKKRM--QGPIPERILGKMTVAIVKALYYLK---EKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVD 177 (318)
T ss_dssp CCC-SEEHHHHHHHH--TSCCCHHHHHHHHHHHHHHHHHHH---HHHCCCCCCCCGGGEEECTTSCEEECCCTTC-----
T ss_pred ecc-CCcHHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHH---hhCCEEeCCCCHHHEEECCCCCEEEEECCCchhccC
Confidence 999 45555554432 126899999999999999999999 53 999999999999999999999999999976644
Q ss_pred CCCCccccccccccccccccc-----cCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCC
Q 011005 361 DSSNRTLLAGTYGYIAPELAY-----TMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPP 435 (496)
Q Consensus 361 ~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (496)
.. ......+++.|+|||++. +..++.++||||||+++|+|++|+.||.... ..............+..
T Consensus 178 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~------~~~~~~~~~~~~~~~~~ 250 (318)
T 2dyl_A 178 DK-AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCK------TDFEVLTKVLQEEPPLL 250 (318)
T ss_dssp ----------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCC------SHHHHHHHHHHSCCCCC
T ss_pred Cc-cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCC------ccHHHHHHHhccCCCCC
Confidence 32 233456899999999984 5578889999999999999999999986321 11122222222222111
Q ss_pred CChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhcc
Q 011005 436 VDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRK 477 (496)
Q Consensus 436 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~ 477 (496)
... ......+.+++.+||+.||++|||++|+++|+|+.+.
T Consensus 251 ~~~--~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~ 290 (318)
T 2dyl_A 251 PGH--MGFSGDFQSFVKDCLTKDHRKRPKYNKLLEHSFIKRY 290 (318)
T ss_dssp CSS--SCCCHHHHHHHHHHTCSCTTTSCCHHHHTTSHHHHHH
T ss_pred Ccc--CCCCHHHHHHHHHHccCChhHCcCHHHHhhCHHHHhc
Confidence 100 0112247789999999999999999999999998754
No 243
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=1.1e-41 Score=353.14 Aligned_cols=268 Identities=25% Similarity=0.285 Sum_probs=205.1
Q ss_pred HhCCCCcceeeecCCeeEEEEEe-CCCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeec------CCe
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLH------KKC 276 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~------~~~ 276 (496)
.++|++.+.||+|+||+||+|.+ .+|+.||||++.........+.+.+|+.++++++||||+++++++.. ++.
T Consensus 13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~ 92 (676)
T 3qa8_A 13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDL 92 (676)
T ss_dssp ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSS
T ss_pred CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCe
Confidence 47899999999999999999976 46899999998775545556778999999999999999999998765 667
Q ss_pred EEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCC---eEEcccc
Q 011005 277 MFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLE---AFVADFG 353 (496)
Q Consensus 277 ~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~---~kl~Dfg 353 (496)
.++||||++||+|.+++........+++..++.++.|++.||+||| +.||+||||||+||+++.++. ++|+|||
T Consensus 93 ~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLH---s~gIVHrDLKP~NILl~~~g~~~~vKL~DFG 169 (676)
T 3qa8_A 93 PLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLH---ENRIIHRDLKPENIVLQPGPQRLIHKIIDLG 169 (676)
T ss_dssp CCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHH---HTTBCCCCCCSTTEEEECCSSSCEEEECSCC
T ss_pred EEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCHHHeEeecCCCceeEEEcccc
Confidence 8999999999999999987665556899999999999999999999 679999999999999997765 8999999
Q ss_pred ccccccCCCCCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCC-------CCCCcchhHh
Q 011005 354 TARLLHADSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSS-------SSDPKIMLID 426 (496)
Q Consensus 354 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~-------~~~~~~~~~~ 426 (496)
++....... ......||+.|+|||.+.+..++.++||||+|+++|+|++|+.||........ .........+
T Consensus 170 ~a~~~~~~~-~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~ 248 (676)
T 3qa8_A 170 YAKELDQGE-LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYD 248 (676)
T ss_dssp CCCBTTSCC-CCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CCSCC
T ss_pred ccccccccc-ccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhhhhh
Confidence 998765433 23446799999999999999999999999999999999999999853211000 0000000000
Q ss_pred hh------cCCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhc
Q 011005 427 VL------DQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITR 476 (496)
Q Consensus 427 ~~------~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~ 476 (496)
.. ....+.+ ..........+.+++.+||++||++|||+.|+++|+|+..
T Consensus 249 ~l~g~~~~~~~lp~p-~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~ 303 (676)
T 3qa8_A 249 DLTGAVKFSSVLPTP-NHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQA 303 (676)
T ss_dssp CCSSSCCCCSSSCCS-CCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHH
T ss_pred hhccccccccccCCc-hhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHH
Confidence 00 0111111 1111123345789999999999999999999998888654
No 244
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=2.2e-40 Score=349.26 Aligned_cols=255 Identities=25% Similarity=0.349 Sum_probs=202.0
Q ss_pred HhCCCCcceeeecCCeeEEEEEeC----CCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEE
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLP----NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFL 279 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 279 (496)
.++|++.+.||+|+||.||+|.+. .+..||+|.+.........+.+.+|+.++++++||||+++++++.+ +..++
T Consensus 389 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~-~~~~l 467 (656)
T 2j0j_A 389 RERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPVWI 467 (656)
T ss_dssp GGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEE
T ss_pred cccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEec-CceEE
Confidence 467888999999999999999764 2567999998876555556788999999999999999999999854 55889
Q ss_pred EEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEcccccccccc
Q 011005 280 IYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLH 359 (496)
Q Consensus 280 V~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 359 (496)
||||+++|+|.+++.... ..+++..++.++.|++.||.||| +.+|+||||||+|||++.++.+||+|||+++...
T Consensus 468 v~E~~~~g~L~~~l~~~~--~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDikp~NILl~~~~~vkL~DFG~a~~~~ 542 (656)
T 2j0j_A 468 IMELCTLGELRSFLQVRK--FSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME 542 (656)
T ss_dssp EEECCTTCBHHHHHHHTT--TTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCCCCCSCC
T ss_pred EEEcCCCCcHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHH---hCCccccccchHhEEEeCCCCEEEEecCCCeecC
Confidence 999999999999997543 25899999999999999999999 6799999999999999999999999999998764
Q ss_pred CCCCC-ccccccccccccccccccCCcCcccchhhHHHHHHHHHh-CCCCCccccccCCCCCCcchhHhhhcCCCCCCCC
Q 011005 360 ADSSN-RTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLM-GKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVD 437 (496)
Q Consensus 360 ~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (496)
..... .....+|+.|+|||++.+..++.++||||||+++|||++ |..||.... .......+.........
T Consensus 543 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~-------~~~~~~~i~~~~~~~~~- 614 (656)
T 2j0j_A 543 DSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVK-------NNDVIGRIENGERLPMP- 614 (656)
T ss_dssp C----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC-------HHHHHHHHHHTCCCCCC-
T ss_pred CCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCC-------HHHHHHHHHcCCCCCCC-
Confidence 43221 223456789999999999999999999999999999997 999986322 11122222222111111
Q ss_pred hhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHh
Q 011005 438 RKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLIT 475 (496)
Q Consensus 438 ~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~ 475 (496)
. .....+.+++.+||+.||++|||+.|+++.+...
T Consensus 615 ~---~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~i 649 (656)
T 2j0j_A 615 P---NCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 649 (656)
T ss_dssp T---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred c---cccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 1 1123577899999999999999999999987654
No 245
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=3.3e-41 Score=326.66 Aligned_cols=258 Identities=21% Similarity=0.354 Sum_probs=197.1
Q ss_pred HhCCCCcceeeecCCeeEEEEEeCCCcEEEEEEcccch-hHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEEEE
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSE-ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLIYE 282 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV~e 282 (496)
.++|++.+.||+|+||.||+|.+++ .+|+|.++... .....+.+.+|+.++++++||||+++++++...+..++|||
T Consensus 32 ~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~e 109 (319)
T 2y4i_B 32 FEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITS 109 (319)
T ss_dssp CSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEECB
T ss_pred HHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEee
Confidence 4679999999999999999998854 48999987542 12223456789999999999999999999999999999999
Q ss_pred ecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCC-
Q 011005 283 YMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHAD- 361 (496)
Q Consensus 283 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~- 361 (496)
|+++++|.+++.... ..+++..++.++.||+.||+||| +.+++||||||+||+++ ++.++|+|||+++.....
T Consensus 110 ~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH---~~~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~ 183 (319)
T 2y4i_B 110 LCKGRTLYSVVRDAK--IVLDVNKTRQIAQEIVKGMGYLH---AKGILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQ 183 (319)
T ss_dssp CCCSEEHHHHTTSSC--CCCCSHHHHHHHHHHHHHHHHHH---HTTCCCCCCCSTTEEEC---CCEECCCSCCC------
T ss_pred cccCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHH---hCCccccCCChhhEEEe-CCCEEEeecCCcccccccc
Confidence 999999999997643 36889999999999999999999 67999999999999998 679999999998754321
Q ss_pred ----CCCcccccccccccccccccc---------CCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhh
Q 011005 362 ----SSNRTLLAGTYGYIAPELAYT---------MVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVL 428 (496)
Q Consensus 362 ----~~~~~~~~gt~~y~aPE~~~~---------~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~ 428 (496)
........|++.|+|||++.+ ..++.++||||||+++|+|++|+.||.... .........
T Consensus 184 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~-------~~~~~~~~~ 256 (319)
T 2y4i_B 184 AGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQP-------AEAIIWQMG 256 (319)
T ss_dssp ----CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCC-------HHHHHHHHH
T ss_pred ccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCC-------HHHHHHHhc
Confidence 122233568999999999875 457889999999999999999999986321 111222222
Q ss_pred cCCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCC
Q 011005 429 DQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTP 479 (496)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~ 479 (496)
....+...... ....+.+++.+||+.||++|||+.++++.+....+..
T Consensus 257 ~~~~~~~~~~~---~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~ 304 (319)
T 2y4i_B 257 TGMKPNLSQIG---MGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRN 304 (319)
T ss_dssp TTCCCCCCCSS---CCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC----
T ss_pred cCCCCCCCcCC---CCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhh
Confidence 22211111100 1123678999999999999999999999987766543
No 246
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=2.2e-39 Score=310.79 Aligned_cols=241 Identities=23% Similarity=0.353 Sum_probs=184.7
Q ss_pred HhCCCCc-ceeeecCCeeEEEEEe-CCCcEEEEEEcccchhHHHHHHHHHHHHHH-Hhhcccccccccceeec----CCe
Q 011005 204 TEDFDIR-YCIGTGGYGSVYKAQL-PNGKVFALKKLHTSEELAFIKSFKNEAQVL-SQVLHRNIVKLYGYCLH----KKC 276 (496)
Q Consensus 204 ~~~~~~~-~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l-~~l~h~niv~~~~~~~~----~~~ 276 (496)
.++|.+. +.||+|+||.||+|.. .+++.||+|.+... ..+.+|+.++ +..+||||+++++++.. ...
T Consensus 16 ~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~------~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~ 89 (299)
T 3m2w_A 16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC------PKARREVELHWRASQCPHIVRIVDVYENLYAGRKC 89 (299)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEE
T ss_pred ccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc------HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCce
Confidence 3567776 7799999999999976 57899999998653 3456788888 44589999999999876 677
Q ss_pred EEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecC---CCCeEEcccc
Q 011005 277 MFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNS---KLEAFVADFG 353 (496)
Q Consensus 277 ~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~---~~~~kl~Dfg 353 (496)
.++||||+++|+|.+++..... ..+++..++.++.|++.||.||| +.+|+||||||+||+++. ++.++|+|||
T Consensus 90 ~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg 165 (299)
T 3m2w_A 90 LLIVMECLDGGELFSRIQDRGD-QAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFG 165 (299)
T ss_dssp EEEEECCCCSCBHHHHHHHCTT-CCCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSTTCCEEECCCT
T ss_pred EEEEEeecCCCcHHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEecCCCCCcEEEeccc
Confidence 8999999999999999986532 35899999999999999999999 779999999999999998 7889999999
Q ss_pred ccccccCCCCCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCC
Q 011005 354 TARLLHADSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLP 433 (496)
Q Consensus 354 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (496)
++.... +..++.++||||+|+++|+|++|+.||............ ..........
T Consensus 166 ~a~~~~----------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~---~~~~~~~~~~ 220 (299)
T 3m2w_A 166 FAKETT----------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGM---KTRIRMGQYE 220 (299)
T ss_dssp TCEECT----------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------CCS---CCSSCTTCCS
T ss_pred cccccc----------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHHH---HHHHhhcccc
Confidence 986542 234678999999999999999999999643321110000 0000001111
Q ss_pred CCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccCCC
Q 011005 434 PPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKTPL 480 (496)
Q Consensus 434 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~~~ 480 (496)
.+ ..........+.+++.+||+.||++|||+.|+++|+|+......
T Consensus 221 ~~-~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~hp~~~~~~~~ 266 (299)
T 3m2w_A 221 FP-NPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKV 266 (299)
T ss_dssp SC-HHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHTGGGS
T ss_pred CC-chhcccCCHHHHHHHHHHcccChhhCCCHHHHhcChhhcccccC
Confidence 00 00011123357899999999999999999999999999876543
No 247
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=3e-39 Score=343.81 Aligned_cols=239 Identities=25% Similarity=0.372 Sum_probs=194.3
Q ss_pred HhCCCCcceeeecCCeeEEEEEeC--CCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccccccccceeecCCe-----
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLP--NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKC----- 276 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~--~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~----- 276 (496)
.++|++.+.||+|+||+||+|.+. +++.||||.+...........+.+|+.++++++||||+++++++...+.
T Consensus 79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~ 158 (681)
T 2pzi_A 79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPV 158 (681)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCce
Confidence 368999999999999999999875 6899999999765544555678999999999999999999999987654
Q ss_pred EEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccc
Q 011005 277 MFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTAR 356 (496)
Q Consensus 277 ~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~ 356 (496)
.++||||++|++|.+.+.. .+++..++.++.||+.||.||| +.+|+||||||+||+++.+ .+||+|||+++
T Consensus 159 ~~lv~E~~~g~~L~~~~~~-----~l~~~~~~~~~~qi~~aL~~lH---~~giiHrDlkp~NIll~~~-~~kl~DFG~a~ 229 (681)
T 2pzi_A 159 GYIVMEYVGGQSLKRSKGQ-----KLPVAEAIAYLLEILPALSYLH---SIGLVYNDLKPENIMLTEE-QLKLIDLGAVS 229 (681)
T ss_dssp EEEEEECCCCEECC----C-----CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECSS-CEEECCCTTCE
T ss_pred eEEEEEeCCCCcHHHHHhC-----CCCHHHHHHHHHHHHHHHHHHH---HCCCeecccChHHeEEeCC-cEEEEecccch
Confidence 7999999999999887654 5899999999999999999999 6799999999999999986 89999999998
Q ss_pred cccCCCCCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCC
Q 011005 357 LLHADSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPV 436 (496)
Q Consensus 357 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (496)
..... ....||+.|+|||++.+.. +.++||||||+++|+|++|..||...... .++.
T Consensus 230 ~~~~~----~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~~~----------------~~~~-- 286 (681)
T 2pzi_A 230 RINSF----GYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYVD----------------GLPE-- 286 (681)
T ss_dssp ETTCC----SCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEECS----------------SCCT--
T ss_pred hcccC----CccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCcccccc----------------cccc--
Confidence 76433 3457999999999987654 88999999999999999999887532110 0111
Q ss_pred ChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHH
Q 011005 437 DRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLI 474 (496)
Q Consensus 437 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~ 474 (496)
..........+.+++.+||+.||++||+..+.+.+.|.
T Consensus 287 ~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~ 324 (681)
T 2pzi_A 287 DDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLT 324 (681)
T ss_dssp TCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHH
T ss_pred cccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHH
Confidence 11112223457899999999999999987776666554
No 248
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=1.7e-39 Score=317.01 Aligned_cols=248 Identities=16% Similarity=0.145 Sum_probs=192.5
Q ss_pred HhCCCCcceeeecCCeeEEEEEeCCCcEEEEEEcccch-------hHHHHHHHHHHHHHHHhhc----------------
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSE-------ELAFIKSFKNEAQVLSQVL---------------- 260 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-------~~~~~~~~~~e~~~l~~l~---------------- 260 (496)
.++|++.+.||+|+||+||+|.+ +|+.||||++.... .....+.+.+|+.++++++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l 97 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL 97 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence 46799999999999999999988 68999999997642 1223367889999999997
Q ss_pred ----------ccccccccceeec-------------CCeEEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHH
Q 011005 261 ----------HRNIVKLYGYCLH-------------KKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHA 317 (496)
Q Consensus 261 ----------h~niv~~~~~~~~-------------~~~~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~ 317 (496)
||||+++++++.. ....++||||+++|++.+.+.+ ..+++..++.++.||+.|
T Consensus 98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~----~~~~~~~~~~i~~qi~~a 173 (336)
T 2vuw_A 98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT----KLSSLATAKSILHQLTAS 173 (336)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT----TCCCHHHHHHHHHHHHHH
T ss_pred cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh----cCCCHHHHHHHHHHHHHH
Confidence 6777777777665 6789999999999987777754 257999999999999999
Q ss_pred HHHHHhCCCCCeEEeCCCCCceEecCCC--------------------CeEEccccccccccCCCCCccccccccccccc
Q 011005 318 LAYLHHDCSPSIIHRDISSNNILLNSKL--------------------EAFVADFGTARLLHADSSNRTLLAGTYGYIAP 377 (496)
Q Consensus 318 l~~lh~~~~~~i~H~dlkp~Nil~~~~~--------------------~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aP 377 (496)
|+|||+ +.+|+||||||+|||++.++ .+||+|||+|+..... ..+||+.|+||
T Consensus 174 L~~lH~--~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~-----~~~gt~~y~aP 246 (336)
T 2vuw_A 174 LAVAEA--SLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG-----IVVFCDVSMDE 246 (336)
T ss_dssp HHHHHH--HHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT-----EEECCCCTTCS
T ss_pred HHHHHH--hCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC-----cEEEeecccCh
Confidence 999993 24899999999999999887 8999999999876432 35799999999
Q ss_pred cccccCCcCcccchhhHHHH-HHHHHhCCCCCccccccCCCCCCcchhHhhhcCC-C-CCCCChhHHHHHHHHHHHHHhc
Q 011005 378 ELAYTMVMTEKCDVYSFGVV-TLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQR-L-PPPVDRKVIRDILLISTVSFAC 454 (496)
Q Consensus 378 E~~~~~~~~~~~DvwslG~i-l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~l~~li~~c 454 (496)
|++.+.. +.++||||+|++ .+++++|..||....+. ........... . ..............+.+|+.+|
T Consensus 247 E~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~ 319 (336)
T 2vuw_A 247 DLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNVLWL------HYLTDKMLKQMTFKTKCNTPAMKQIKRKIQEFHRTM 319 (336)
T ss_dssp GGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHHHHH------HHHHHHHHHTCCCSSCCCSHHHHHHHHHHHHHHHHG
T ss_pred hhhcCCC-ccceehhhhhCCCCcccccccCCCcchhhh------hHHHHhhhhhhccCcccchhhhhhcCHHHHHHHHHH
Confidence 9998776 889999998777 77899999998532110 00111111111 1 1112222334556688999999
Q ss_pred ccCCCCCCCCHHHHH-HHHHHh
Q 011005 455 LQSNPKSRPTMQSVS-QEFLIT 475 (496)
Q Consensus 455 l~~dP~~Rps~~evl-~~~~~~ 475 (496)
|+.| |++|++ +|+|+.
T Consensus 320 L~~d-----sa~e~l~~Hp~f~ 336 (336)
T 2vuw_A 320 LNFS-----SATDLLCQHSLFK 336 (336)
T ss_dssp GGSS-----SHHHHHHHCGGGC
T ss_pred hccC-----CHHHHHhcCCCcC
Confidence 9976 999999 999973
No 249
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=4.9e-39 Score=321.99 Aligned_cols=248 Identities=16% Similarity=0.128 Sum_probs=185.0
Q ss_pred hCCCCcceeeecCCeeEEEEEe-CCCcEEEEEEcccch--hHHHHHHHHHHHHHHHhhcc-cccccccce----------
Q 011005 205 EDFDIRYCIGTGGYGSVYKAQL-PNGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLH-RNIVKLYGY---------- 270 (496)
Q Consensus 205 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h-~niv~~~~~---------- 270 (496)
..|...+.||+|+||+||+|.+ .+|+.||||++.... .....+.+.+|+.+++.+.| +|......+
T Consensus 78 ~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 157 (413)
T 3dzo_A 78 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLV 157 (413)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEE
T ss_pred eeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhc
Confidence 3477788999999999999975 579999999987432 22235678899999999976 322211111
Q ss_pred -----------eec-----CCeEEEEEEecCCCChhhhhhC----CCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeE
Q 011005 271 -----------CLH-----KKCMFLIYEYMERGSLFCNLHN----NEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSII 330 (496)
Q Consensus 271 -----------~~~-----~~~~~lV~e~~~~g~L~~~l~~----~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~ 330 (496)
+.. ....+++|+++ +++|.+++.. ......+++..++.++.||+.||+||| +++|+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ii 233 (413)
T 3dzo_A 158 KDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLH---HYGLV 233 (413)
T ss_dssp ECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHH---HTTEE
T ss_pred ccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHH---hCCcc
Confidence 111 12356777765 6799988851 122335788899999999999999999 77999
Q ss_pred EeCCCCCceEecCCCCeEEccccccccccCCCCCcccccccccccccccc----------ccCCcCcccchhhHHHHHHH
Q 011005 331 HRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELA----------YTMVMTEKCDVYSFGVVTLE 400 (496)
Q Consensus 331 H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~----------~~~~~~~~~DvwslG~il~e 400 (496)
||||||+|||++.++.+||+|||+++..... ....+| +.|+|||++ .+..++.++|||||||++||
T Consensus 234 HrDiKp~NILl~~~~~~kL~DFG~a~~~~~~---~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~e 309 (413)
T 3dzo_A 234 HTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS---AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYW 309 (413)
T ss_dssp CSCCCGGGEEECTTCCEEECCGGGCEETTEE---ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHH
T ss_pred cCCcccceEEEecCCeEEEEeccceeecCCc---cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHH
Confidence 9999999999999999999999999765432 344567 999999999 56678899999999999999
Q ss_pred HHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhc
Q 011005 401 VLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKVIRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITR 476 (496)
Q Consensus 401 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~ 476 (496)
|++|+.||....... .....+.... .. ...+.+|+.+||+.||++|||+.|+++|+|+..
T Consensus 310 lltg~~Pf~~~~~~~-------~~~~~~~~~~--~~-------~~~~~~li~~~l~~dP~~Rpt~~~~l~~~~~~~ 369 (413)
T 3dzo_A 310 IWCADLPNTDDAALG-------GSEWIFRSCK--NI-------PQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQ 369 (413)
T ss_dssp HHHSSCCCCTTGGGS-------CSGGGGSSCC--CC-------CHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHH
T ss_pred HHHCCCCCCCcchhh-------hHHHHHhhcc--cC-------CHHHHHHHHHHccCChhhCcCHHHHHhCHHHHH
Confidence 999999996433211 1111111111 11 124779999999999999999999999998864
No 250
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=7.3e-38 Score=297.75 Aligned_cols=234 Identities=10% Similarity=0.033 Sum_probs=183.0
Q ss_pred HhCCCCcceeeecCCeeEEEEEeC-CCcEEEEEEcccch--hHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEE
Q 011005 204 TEDFDIRYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSE--ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLI 280 (496)
Q Consensus 204 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV 280 (496)
.++|++.+.||+|+||.||+|.+. +++.||+|.+.... .....+.+.+|+.++++++||||+++++++..++..++|
T Consensus 30 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 109 (286)
T 3uqc_A 30 NGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVV 109 (286)
T ss_dssp TTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred cCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEE
Confidence 367999999999999999999775 48999999997643 234457789999999999999999999999999999999
Q ss_pred EEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccC
Q 011005 281 YEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHA 360 (496)
Q Consensus 281 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 360 (496)
|||++|++|.+++... ....++..++.|++.||+||| +.||+||||||+||+++.++.+||+++|
T Consensus 110 ~e~~~g~~L~~~l~~~-----~~~~~~~~i~~ql~~aL~~lH---~~givH~Dikp~NIll~~~g~~kl~~~~------- 174 (286)
T 3uqc_A 110 AEWIRGGSLQEVADTS-----PSPVGAIRAMQSLAAAADAAH---RAGVALSIDHPSRVRVSIDGDVVLAYPA------- 174 (286)
T ss_dssp EECCCEEEHHHHHTTC-----CCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEEETTSCEEECSCC-------
T ss_pred EEecCCCCHHHHHhcC-----CChHHHHHHHHHHHHHHHHHH---HCCCccCCCCcccEEEcCCCCEEEEecc-------
Confidence 9999999999999642 355678899999999999999 7799999999999999999999998543
Q ss_pred CCCCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccccccCCCCCCcchhHhhhcCCCCCCCChhH
Q 011005 361 DSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDILSSLSSSSDPKIMLIDVLDQRLPPPVDRKV 440 (496)
Q Consensus 361 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 440 (496)
|++| ++.++||||||+++|||++|+.||......... . ............ .....
T Consensus 175 -------------~~~~-------~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~---~-~~~~~~~~~~~~-~~~~~ 229 (286)
T 3uqc_A 175 -------------TMPD-------ANPQDDIRGIGASLYALLVNRWPLPEAGVRSGL---A-PAERDTAGQPIE-PADID 229 (286)
T ss_dssp -------------CCTT-------CCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCS---E-ECCBCTTSCBCC-HHHHC
T ss_pred -------------ccCC-------CCchhHHHHHHHHHHHHHHCCCCCCcCCcchhh---H-HHHHHhccCCCC-hhhcc
Confidence 3332 678999999999999999999999754321100 0 000000111110 00000
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHhccC
Q 011005 441 IRDILLISTVSFACLQSNPKSRPTMQSVSQEFLITRKT 478 (496)
Q Consensus 441 ~~~~~~l~~li~~cl~~dP~~Rps~~evl~~~~~~~~~ 478 (496)
......+.+++.+||+.||++| |+.|+++.+......
T Consensus 230 ~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~~ 266 (286)
T 3uqc_A 230 RDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQATAV 266 (286)
T ss_dssp TTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC-
T ss_pred cCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhcc
Confidence 1112347899999999999999 999999999876654
No 251
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.97 E-value=3.4e-32 Score=281.70 Aligned_cols=186 Identities=18% Similarity=0.110 Sum_probs=132.7
Q ss_pred eeecCCeeEEEEE-eCCCcEEEEEEcccc---------hhHHHHHHHHHHHHHHHhh-cccccccccceeecCCeEEEEE
Q 011005 213 IGTGGYGSVYKAQ-LPNGKVFALKKLHTS---------EELAFIKSFKNEAQVLSQV-LHRNIVKLYGYCLHKKCMFLIY 281 (496)
Q Consensus 213 lg~G~~g~Vy~~~-~~~~~~vavK~~~~~---------~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lV~ 281 (496)
.+.|+.|.+..++ .--|+.+++|.+... ......+++.+|+++|+++ .|+||++++++++++...||||
T Consensus 242 ~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVM 321 (569)
T 4azs_A 242 PYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVM 321 (569)
T ss_dssp -C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEE
T ss_pred cccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEE
Confidence 3455555555542 224888999998653 1233456799999999999 6999999999999999999999
Q ss_pred EecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCC
Q 011005 282 EYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHAD 361 (496)
Q Consensus 282 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 361 (496)
||++|++|.+++.... .++.. +|+.||+.||+|+| ++||+||||||+|||++.++.+||+|||+|+.....
T Consensus 322 Eyv~G~~L~d~i~~~~---~l~~~---~I~~QIl~AL~ylH---~~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~ 392 (569)
T 4azs_A 322 EKLPGRLLSDMLAAGE---EIDRE---KILGSLLRSLAALE---KQGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQD 392 (569)
T ss_dssp ECCCSEEHHHHHHTTC---CCCHH---HHHHHHHHHHHHHH---HTTCEESCCCGGGEEECTTSCEEECCCTTEESCC--
T ss_pred ecCCCCcHHHHHHhCC---CCCHH---HHHHHHHHHHHHHH---HCCceeccCchHhEEECCCCCEEEeecccCeeCCCC
Confidence 9999999999998754 45544 48999999999999 789999999999999999999999999999887665
Q ss_pred CCCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCC
Q 011005 362 SSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPR 408 (496)
Q Consensus 362 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~ 408 (496)
.......+||+.|+|||++.+. +..++|+||+|++++++.++..++
T Consensus 393 ~~~~~t~vGTp~YmAPE~l~g~-~~~~~d~~s~g~~~~~l~~~~~~~ 438 (569)
T 4azs_A 393 CSWPTNLVQSFFVFVNELFAEN-KSWNGFWRSAPVHPFNLPQPWSNW 438 (569)
T ss_dssp -CCSHHHHHHHHHHHHHHC------------------CCCCTTHHHH
T ss_pred CccccCceechhhccHHHhCCC-CCCcccccccccchhhhccccchh
Confidence 5556667899999999998764 677899999999998887665553
No 252
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.94 E-value=9.5e-28 Score=247.06 Aligned_cols=184 Identities=14% Similarity=0.163 Sum_probs=145.2
Q ss_pred CCcceeeecCCeeEEEEEeCCCcEEEEEEcccch-------hHHHHHHHHHHHHHHHhhcccccccccceeecCCeEEEE
Q 011005 208 DIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSE-------ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCLHKKCMFLI 280 (496)
Q Consensus 208 ~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-------~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lV 280 (496)
...+.||+|+||+||+|.. .++.+++|+..... .....+.+.+|++++++++||||+++..++...+..++|
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lV 417 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIM 417 (540)
T ss_dssp ---------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEE
T ss_pred CCCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEE
Confidence 4466899999999999955 57888888764321 112245689999999999999999777777677777999
Q ss_pred EEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccC
Q 011005 281 YEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHA 360 (496)
Q Consensus 281 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 360 (496)
|||++|++|.+++.. +..++.|++.||+||| +++|+||||||+|||++. .+||+|||+++....
T Consensus 418 mE~~~ggsL~~~l~~-----------~~~i~~qi~~aL~~LH---~~gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~ 481 (540)
T 3en9_A 418 MSYINGKLAKDVIED-----------NLDIAYKIGEIVGKLH---KNDVIHNDLTTSNFIFDK--DLYIIDFGLGKISNL 481 (540)
T ss_dssp EECCCSEEHHHHSTT-----------CTHHHHHHHHHHHHHH---HTTEECTTCCTTSEEESS--SEEECCCTTCEECCC
T ss_pred EECCCCCCHHHHHHH-----------HHHHHHHHHHHHHHHH---HCcCccCCCCHHHEEECC--eEEEEECccCEECCC
Confidence 999999999999875 4579999999999999 779999999999999999 999999999987744
Q ss_pred CCCC-------cccccccccccccccccc--CCcCcccchhhHHHHHHHHHhCCCCC
Q 011005 361 DSSN-------RTLLAGTYGYIAPELAYT--MVMTEKCDVYSFGVVTLEVLMGKHPR 408 (496)
Q Consensus 361 ~~~~-------~~~~~gt~~y~aPE~~~~--~~~~~~~DvwslG~il~el~~g~~p~ 408 (496)
.... ....+||+.|+|||++.. ..|+..+|+||..+-..+-+.++.+|
T Consensus 482 ~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY 538 (540)
T 3en9_A 482 DEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY 538 (540)
T ss_dssp HHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred ccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence 3211 134679999999999987 67888999999999888888777665
No 253
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.91 E-value=2.2e-24 Score=203.69 Aligned_cols=163 Identities=15% Similarity=0.164 Sum_probs=127.2
Q ss_pred HHHHHhCCCCcceeeecCCeeEEEEEeCCCcEEEEEEcccchhH-----------------HHHHHHHHHHHHHHhhccc
Q 011005 200 LIEATEDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEEL-----------------AFIKSFKNEAQVLSQVLHR 262 (496)
Q Consensus 200 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-----------------~~~~~~~~e~~~l~~l~h~ 262 (496)
+......|.+.+.||+|+||.||+|.+.+|+.||+|.++..... .....+.+|+.++++++
T Consensus 85 ~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~-- 162 (282)
T 1zar_A 85 LVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ-- 162 (282)
T ss_dssp HHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--
T ss_pred HHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--
Confidence 33344556677999999999999998888999999999653210 13456889999999999
Q ss_pred ccccccceeecCCeEEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEec
Q 011005 263 NIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLN 342 (496)
Q Consensus 263 niv~~~~~~~~~~~~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~ 342 (496)
| +++.+++.. +..++||||++||+|.+ +.. .....++.|++.||.||| ..||+||||||+|||++
T Consensus 163 ~-~~v~~~~~~-~~~~lvmE~~~g~~L~~-l~~---------~~~~~i~~qi~~~l~~lH---~~giiHrDlkp~NILl~ 227 (282)
T 1zar_A 163 G-LAVPKVYAW-EGNAVLMELIDAKELYR-VRV---------ENPDEVLDMILEEVAKFY---HRGIVHGDLSQYNVLVS 227 (282)
T ss_dssp T-SSSCCEEEE-ETTEEEEECCCCEEGGG-CCC---------SCHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEEE
T ss_pred C-CCcCeEEec-cceEEEEEecCCCcHHH-cch---------hhHHHHHHHHHHHHHHHH---HCCCEeCCCCHHHEEEE
Confidence 5 777776544 45689999999999988 421 123469999999999999 77999999999999999
Q ss_pred CCCCeEEccccccccccCCCCCcccccccccccccccccc----------CCcCcccchhh
Q 011005 343 SKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYT----------MVMTEKCDVYS 393 (496)
Q Consensus 343 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~----------~~~~~~~Dvws 393 (496)
++.+||+|||+++.. ..++|||++.. ..+...+|+|.
T Consensus 228 -~~~vkl~DFG~a~~~-------------~~~~a~e~l~rdv~~i~~~f~~~~~~~~~~~~ 274 (282)
T 1zar_A 228 -EEGIWIIDFPQSVEV-------------GEEGWREILERDVRNIITYFSRTYRTEKDINS 274 (282)
T ss_dssp -TTEEEECCCTTCEET-------------TSTTHHHHHHHHHHHHHHHHHHHHCCCCCHHH
T ss_pred -CCcEEEEECCCCeEC-------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCChHH
Confidence 999999999999632 34688998754 34556667765
No 254
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.81 E-value=6.4e-20 Score=171.04 Aligned_cols=138 Identities=20% Similarity=0.242 Sum_probs=105.5
Q ss_pred CCCcceeeecCCeeEEEEEe-CCCcE--EEEEEcccchh-----------------------HHHHHHHHHHHHHHHhhc
Q 011005 207 FDIRYCIGTGGYGSVYKAQL-PNGKV--FALKKLHTSEE-----------------------LAFIKSFKNEAQVLSQVL 260 (496)
Q Consensus 207 ~~~~~~lg~G~~g~Vy~~~~-~~~~~--vavK~~~~~~~-----------------------~~~~~~~~~e~~~l~~l~ 260 (496)
|.+.+.||+|+||.||+|.+ .+|+. ||||.++.... ......+.+|+.+++++.
T Consensus 49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 128 (258)
T 1zth_A 49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK 128 (258)
T ss_dssp EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence 56788999999999999987 68888 99998754311 011235789999999999
Q ss_pred cccc--ccccceeecCCeEEEEEEecCC-C----ChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeC
Q 011005 261 HRNI--VKLYGYCLHKKCMFLIYEYMER-G----SLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRD 333 (496)
Q Consensus 261 h~ni--v~~~~~~~~~~~~~lV~e~~~~-g----~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~d 333 (496)
|+++ +.+++. ...++||||+.+ | +|.+.... .++..+..++.|++.||.|||. ..||+|||
T Consensus 129 ~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~------~~~~~~~~i~~qi~~~l~~lH~--~~givHrD 196 (258)
T 1zth_A 129 EAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE------LKELDVEGIFNDVVENVKRLYQ--EAELVHAD 196 (258)
T ss_dssp HTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG------GGGSCHHHHHHHHHHHHHHHHH--TSCEECSS
T ss_pred hCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc------cChHHHHHHHHHHHHHHHHHHH--HCCEEeCC
Confidence 8865 333332 245799999942 4 55554332 2344567899999999999994 35999999
Q ss_pred CCCCceEecCCCCeEEccccccccc
Q 011005 334 ISSNNILLNSKLEAFVADFGTARLL 358 (496)
Q Consensus 334 lkp~Nil~~~~~~~kl~Dfg~~~~~ 358 (496)
|||+|||++. .++|+|||+|...
T Consensus 197 lkp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 197 LSEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp CSTTSEEESS--SEEECCCTTCEET
T ss_pred CCHHHEEEcC--cEEEEECcccccC
Confidence 9999999998 9999999999765
No 255
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.73 E-value=4.4e-18 Score=164.68 Aligned_cols=138 Identities=12% Similarity=0.102 Sum_probs=98.3
Q ss_pred CCCcceeeecCCeeEEEEEeCCCcEEEEEEcccchh-------------HHHHHH--------HHHHHHHHHhhcccccc
Q 011005 207 FDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEE-------------LAFIKS--------FKNEAQVLSQVLHRNIV 265 (496)
Q Consensus 207 ~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~-------------~~~~~~--------~~~e~~~l~~l~h~niv 265 (496)
|.+.++||+|++|.||+|..++|+.||||+++.... ...... ..+|...+.++.+.++.
T Consensus 97 Y~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv~ 176 (397)
T 4gyi_A 97 YSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGFP 176 (397)
T ss_dssp SEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred EEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 888999999999999999999999999998753210 000011 23455555555444332
Q ss_pred cccceeecCCeEEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCC
Q 011005 266 KLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKL 345 (496)
Q Consensus 266 ~~~~~~~~~~~~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~ 345 (496)
-..-+... ..++||||++|++|..+... .....++.|++.+|.+|| ..|||||||||.|||+++++
T Consensus 177 vp~p~~~~--~~~LVME~i~G~~L~~l~~~---------~~~~~l~~qll~~l~~lH---~~gIVHrDLKp~NILl~~dg 242 (397)
T 4gyi_A 177 VPEPIAQS--RHTIVMSLVDALPMRQVSSV---------PDPASLYADLIALILRLA---KHGLIHGDFNEFNILIREEK 242 (397)
T ss_dssp CCCEEEEE--TTEEEEECCSCEEGGGCCCC---------SCHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEEEEEE
T ss_pred CCeeeecc--CceEEEEecCCccHhhhccc---------HHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHEEEeCCC
Confidence 11111111 23699999999888654321 123468899999999999 67999999999999998876
Q ss_pred C----------eEEccccccccc
Q 011005 346 E----------AFVADFGTARLL 358 (496)
Q Consensus 346 ~----------~kl~Dfg~~~~~ 358 (496)
. +.|+||+.+...
T Consensus 243 d~~d~~~~~~~~~iID~~Q~V~~ 265 (397)
T 4gyi_A 243 DAEDPSSITLTPIIIXFPQMVSM 265 (397)
T ss_dssp CSSCTTSEEEEEEECCCTTCEET
T ss_pred CcccccccccceEEEEeCCcccC
Confidence 3 789999988654
No 256
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.73 E-value=9.5e-18 Score=152.39 Aligned_cols=127 Identities=26% Similarity=0.334 Sum_probs=108.9
Q ss_pred CCccccCCh-hccCCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCCC
Q 011005 1 MYKIGIIPP-EIGNLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGSI 79 (496)
Q Consensus 1 ~n~~~~lp~-~~~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~ 79 (496)
.|+|+.+|. .|..+++|+.|+|++|+|++..|+.|..+++|++|+|++|+|+...+..|..+++|+.|+|++|+|++..
T Consensus 41 ~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~ 120 (220)
T 2v9t_B 41 QNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLR 120 (220)
T ss_dssp SSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCC
T ss_pred CCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEECCCCCCCEeC
Confidence 477788777 7888999999999999999888889999999999999999999555556788999999999999999777
Q ss_pred CccccCcccccccccccccCCCCCCCCCCCCCccccccccCCCCCCCCC
Q 011005 80 PGEITKLSRLDYLNLSSNKLSGPVPFSNNDLSSMHTVVSLSPNNGLCGN 128 (496)
Q Consensus 80 ~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~l~~~~~~~~n~~~c~~ 128 (496)
|..|..+++|+.|+|++|.|++..+..|..+++|+. +.+.+|++.|+.
T Consensus 121 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~-L~L~~N~~~c~c 168 (220)
T 2v9t_B 121 VDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQT-MHLAQNPFICDC 168 (220)
T ss_dssp TTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCE-EECCSSCEECSG
T ss_pred HHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCE-EEeCCCCcCCCC
Confidence 888999999999999999999888888988988854 567888888753
No 257
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.72 E-value=1.2e-17 Score=151.80 Aligned_cols=127 Identities=20% Similarity=0.247 Sum_probs=113.6
Q ss_pred CCccccCCh--hccCCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCC
Q 011005 1 MYKIGIIPP--EIGNLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGS 78 (496)
Q Consensus 1 ~n~~~~lp~--~~~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~ 78 (496)
.|+++.++. .|..+++|+.|+|++|+|++..+..|..+++|++|+|++|+|++..|..|..+++|+.|+|++|+|++.
T Consensus 41 ~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 120 (220)
T 2v70_A 41 NNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCV 120 (220)
T ss_dssp SSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCB
T ss_pred CCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECCCCcCCeE
Confidence 477777743 488999999999999999988888999999999999999999987777899999999999999999988
Q ss_pred CCccccCcccccccccccccCCCCCCCCCCCCCccccccccCCCCCCCCC
Q 011005 79 IPGEITKLSRLDYLNLSSNKLSGPVPFSNNDLSSMHTVVSLSPNNGLCGN 128 (496)
Q Consensus 79 ~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~l~~~~~~~~n~~~c~~ 128 (496)
.|..|..+++|+.|+|++|.|++..|..|..+++|+. +.+.+|++.|+.
T Consensus 121 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~-L~L~~N~l~c~c 169 (220)
T 2v70_A 121 GNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLST-LNLLANPFNCNC 169 (220)
T ss_dssp CTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCE-EECCSCCEECSG
T ss_pred CHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCE-EEecCcCCcCCC
Confidence 8899999999999999999999999999999999965 578889888863
No 258
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.71 E-value=2.8e-17 Score=145.96 Aligned_cols=124 Identities=25% Similarity=0.353 Sum_probs=112.3
Q ss_pred CCccccCChhccCCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCCCC
Q 011005 1 MYKIGIIPPEIGNLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGSIP 80 (496)
Q Consensus 1 ~n~~~~lp~~~~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~ 80 (496)
.|+++.+|..+. ++|+.|+|++|+|+ .+|..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|+|++..|
T Consensus 19 ~~~l~~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~ 95 (193)
T 2wfh_A 19 NKGLKVLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPP 95 (193)
T ss_dssp TSCCSSCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCT
T ss_pred CCCCCcCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCccCEeCH
Confidence 478899998764 68999999999998 778999999999999999999998777889999999999999999997778
Q ss_pred ccccCcccccccccccccCCCCCCCCCCCCCccccccccCCCCCCCCC
Q 011005 81 GEITKLSRLDYLNLSSNKLSGPVPFSNNDLSSMHTVVSLSPNNGLCGN 128 (496)
Q Consensus 81 ~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~l~~~~~~~~n~~~c~~ 128 (496)
..|..+++|+.|+|++|.|++..+..|..+++|+. +.+.+|++.|+.
T Consensus 96 ~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~-L~L~~N~~~C~c 142 (193)
T 2wfh_A 96 RTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSH-LAIGANPLYCDC 142 (193)
T ss_dssp TTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCE-EECCSSCEECSG
T ss_pred HHhCCCCCCCEEECCCCCCCeeChhhhhcCccccE-EEeCCCCeecCC
Confidence 88999999999999999999888888999999955 578899988864
No 259
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.70 E-value=2.4e-17 Score=146.42 Aligned_cols=124 Identities=27% Similarity=0.331 Sum_probs=112.2
Q ss_pred CCccccCChhccCCCCCCEEeccCCccCCCCCc-cCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCCC
Q 011005 1 MYKIGIIPPEIGNLKNLIKLDVGSNSLIGPIPS-ALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGSI 79 (496)
Q Consensus 1 ~n~~~~lp~~~~~l~~L~~L~l~~n~i~~~~p~-~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~ 79 (496)
+|+++.+|..+.. +|+.|+|++|+|++..+. .|..+++|++|+|++|+|++..|..|..+++|+.|+|++|+|++..
T Consensus 17 ~~~l~~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 94 (192)
T 1w8a_A 17 GRGLKEIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEIS 94 (192)
T ss_dssp TSCCSSCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEEC
T ss_pred CCCcCcCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCCcCCccC
Confidence 4788999987755 999999999999976664 4899999999999999999888999999999999999999999888
Q ss_pred CccccCcccccccccccccCCCCCCCCCCCCCccccccccCCCCCCCC
Q 011005 80 PGEITKLSRLDYLNLSSNKLSGPVPFSNNDLSSMHTVVSLSPNNGLCG 127 (496)
Q Consensus 80 ~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~l~~~~~~~~n~~~c~ 127 (496)
+..|..+++|+.|++++|+|++..|..|..+++|+. +.+++|++.|.
T Consensus 95 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~-L~L~~N~l~c~ 141 (192)
T 1w8a_A 95 NKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTS-LNLASNPFNCN 141 (192)
T ss_dssp SSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCE-EECTTCCBCCS
T ss_pred HHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCE-EEeCCCCccCc
Confidence 888999999999999999999999999999999965 57888888875
No 260
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.70 E-value=9.6e-17 Score=146.74 Aligned_cols=126 Identities=28% Similarity=0.277 Sum_probs=100.0
Q ss_pred CCccccCC-hhccCCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCCC
Q 011005 1 MYKIGIIP-PEIGNLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGSI 79 (496)
Q Consensus 1 ~n~~~~lp-~~~~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~ 79 (496)
+|++..++ ..|.++++|+.|+|++|+|+...+..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|+|+ .+
T Consensus 49 ~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~l 127 (229)
T 3e6j_A 49 DNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-EL 127 (229)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SC
T ss_pred CCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-cc
Confidence 36777764 46788888888888888887666667788888888888888888665666788888888888888888 77
Q ss_pred CccccCcccccccccccccCCCCCCCCCCCCCccccccccCCCCCCCCC
Q 011005 80 PGEITKLSRLDYLNLSSNKLSGPVPFSNNDLSSMHTVVSLSPNNGLCGN 128 (496)
Q Consensus 80 ~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~l~~~~~~~~n~~~c~~ 128 (496)
|..+..+++|+.|++++|+|++..+..|..+++|+. +.+.+|++.|..
T Consensus 128 p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~-L~l~~N~~~c~c 175 (229)
T 3e6j_A 128 PRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTH-AYLFGNPWDCEC 175 (229)
T ss_dssp CTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCE-EECTTSCBCTTB
T ss_pred CcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCE-EEeeCCCccCCc
Confidence 888888888888888888888777777888888854 567778777753
No 261
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.67 E-value=3.3e-16 Score=145.38 Aligned_cols=115 Identities=22% Similarity=0.302 Sum_probs=74.6
Q ss_pred CccccCCh-hccCCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCCCC
Q 011005 2 YKIGIIPP-EIGNLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGSIP 80 (496)
Q Consensus 2 n~~~~lp~-~~~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~ 80 (496)
|+++.++. .|.++++|++|+|++|+|++..|..|..+++|++|+|++|+|++..+..|..+++|+.|+|++|++++..+
T Consensus 45 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 124 (251)
T 3m19_A 45 TGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPS 124 (251)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCT
T ss_pred CCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcCh
Confidence 55666555 56667777777777777776666666667777777777777765555556666666666666666664444
Q ss_pred ccccCcccccccccccccCCCCCCCCCCCCCccccc
Q 011005 81 GEITKLSRLDYLNLSSNKLSGPVPFSNNDLSSMHTV 116 (496)
Q Consensus 81 ~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~l~~~ 116 (496)
..+..+++|+.|++++|.|++..+..|..+++|+.+
T Consensus 125 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 160 (251)
T 3m19_A 125 GVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTL 160 (251)
T ss_dssp TTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred hHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEE
Confidence 455666666666666666666555566666666443
No 262
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.66 E-value=6.3e-16 Score=139.13 Aligned_cols=126 Identities=26% Similarity=0.318 Sum_probs=97.3
Q ss_pred CCccccCCh-hccCCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCCC
Q 011005 1 MYKIGIIPP-EIGNLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGSI 79 (496)
Q Consensus 1 ~n~~~~lp~-~~~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~ 79 (496)
+|+++.+|. .|.++++|++|+|++|++++..+..|..+++|++|+|++|+|++..+..|..+++|+.|+|++|++++..
T Consensus 37 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 116 (208)
T 2o6s_A 37 TNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLP 116 (208)
T ss_dssp SSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCC
T ss_pred CCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccC
Confidence 367777776 4678888888888888888666666788888888888888888655556788888888888888888666
Q ss_pred CccccCcccccccccccccCCCCCCCCCCCCCccccccccCCCCCCCC
Q 011005 80 PGEITKLSRLDYLNLSSNKLSGPVPFSNNDLSSMHTVVSLSPNNGLCG 127 (496)
Q Consensus 80 ~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~l~~~~~~~~n~~~c~ 127 (496)
+..+..+++|+.|++++|.+++..+..+..+++|+. +.+..|+..|.
T Consensus 117 ~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~-L~l~~N~~~~~ 163 (208)
T 2o6s_A 117 DGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQY-IWLHDNPWDCT 163 (208)
T ss_dssp TTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCE-EECCSCCBCCC
T ss_pred HhHhccCCcCCEEECCCCccceeCHHHhccCCCccE-EEecCCCeecC
Confidence 666788888888888888888777777888888854 45666766553
No 263
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.65 E-value=7e-16 Score=146.25 Aligned_cols=124 Identities=29% Similarity=0.289 Sum_probs=89.8
Q ss_pred CccccCChhccCCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCCCCc
Q 011005 2 YKIGIIPPEIGNLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGSIPG 81 (496)
Q Consensus 2 n~~~~lp~~~~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~ 81 (496)
|+++.+|..+..+++|++|+|++|+|++..|..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|++++..+.
T Consensus 87 N~l~~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~ 166 (290)
T 1p9a_G 87 NQLQSLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAG 166 (290)
T ss_dssp SCCSSCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTT
T ss_pred CcCCcCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcCCccCHH
Confidence 66777777777777778888888877766667777777788888888877765555667777788888888887754455
Q ss_pred cccCcccccccccccccCCCCCCCCCCCCCccccccccCCCCCCCC
Q 011005 82 EITKLSRLDYLNLSSNKLSGPVPFSNNDLSSMHTVVSLSPNNGLCG 127 (496)
Q Consensus 82 ~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~l~~~~~~~~n~~~c~ 127 (496)
.+..+++|+.|++++|+|+ .+|..+..+.+|+. +.+.+|++.|+
T Consensus 167 ~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~-l~L~~Np~~C~ 210 (290)
T 1p9a_G 167 LLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPF-AFLHGNPWLCN 210 (290)
T ss_dssp TTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSE-EECCSCCBCCS
T ss_pred HhcCcCCCCEEECCCCcCC-ccChhhcccccCCe-EEeCCCCccCc
Confidence 5677777888888888777 45556666666643 45677777775
No 264
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.65 E-value=9.8e-16 Score=134.11 Aligned_cols=124 Identities=26% Similarity=0.299 Sum_probs=108.1
Q ss_pred CCccccCChhccCCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCCCC
Q 011005 1 MYKIGIIPPEIGNLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGSIP 80 (496)
Q Consensus 1 ~n~~~~lp~~~~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~ 80 (496)
.|+++.+|..+. ++|+.|+|++|++++..+..|..+++|++|+|++|+|++..+..|..+++|+.|+|++|++++..+
T Consensus 16 ~~~l~~~p~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 93 (177)
T 2o6r_A 16 SKGLTSVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQSLPN 93 (177)
T ss_dssp SSCCSSCCTTCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCT
T ss_pred CCCCccCCCCCC--CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCCccccCH
Confidence 367888887554 699999999999998777788999999999999999997666678999999999999999997777
Q ss_pred ccccCcccccccccccccCCCCCCCCCCCCCccccccccCCCCCCCC
Q 011005 81 GEITKLSRLDYLNLSSNKLSGPVPFSNNDLSSMHTVVSLSPNNGLCG 127 (496)
Q Consensus 81 ~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~l~~~~~~~~n~~~c~ 127 (496)
..+..+++|+.|++++|.+++..+..+..+++|+. +.+.+|+..|.
T Consensus 94 ~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~-L~l~~N~~~~~ 139 (177)
T 2o6r_A 94 GVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQK-IWLHTNPWDCS 139 (177)
T ss_dssp TTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCE-EECCSSCBCCC
T ss_pred HHhhCCcccCEEECcCCcceEeCHHHhcCCcccCE-EEecCCCeecc
Confidence 77899999999999999999888878899999965 46778877764
No 265
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.64 E-value=1.2e-15 Score=143.28 Aligned_cols=124 Identities=29% Similarity=0.327 Sum_probs=69.4
Q ss_pred CccccCCh-hccCCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCCCC
Q 011005 2 YKIGIIPP-EIGNLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGSIP 80 (496)
Q Consensus 2 n~~~~lp~-~~~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~ 80 (496)
|+++.+|. .|.++++|++|+|++|++++..+..|..+++|++|+|++|+|++..|..+..+++|+.|+|++|++++..+
T Consensus 95 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 174 (272)
T 3rfs_A 95 NQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPE 174 (272)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCT
T ss_pred CccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCH
Confidence 45555554 34555666666666666655555555556666666666666654444445556666666666666654444
Q ss_pred ccccCcccccccccccccCCCCCCCCCCCCCccccccccCCCCCCC
Q 011005 81 GEITKLSRLDYLNLSSNKLSGPVPFSNNDLSSMHTVVSLSPNNGLC 126 (496)
Q Consensus 81 ~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~l~~~~~~~~n~~~c 126 (496)
..+..+++|+.|++++|.+++..+..+..+++|+. +.+.+|+..|
T Consensus 175 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~-L~l~~N~~~~ 219 (272)
T 3rfs_A 175 GVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQY-IWLHDNPWDC 219 (272)
T ss_dssp TTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCE-EECCSSCBCC
T ss_pred HHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCE-EEccCCCccc
Confidence 44555666666666666666555555555555533 3445554444
No 266
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.64 E-value=2.2e-16 Score=170.20 Aligned_cols=130 Identities=37% Similarity=0.643 Sum_probs=115.3
Q ss_pred cCChhccCCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCCCCccccC
Q 011005 6 IIPPEIGNLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGSIPGEITK 85 (496)
Q Consensus 6 ~lp~~~~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~ 85 (496)
.+|..++++++|+.|||++|+++|.+|..|+++++|+.|+|++|+++|.+|..++++++|+.|||++|+++|.+|..+..
T Consensus 623 ~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~ 702 (768)
T 3rgz_A 623 HTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSA 702 (768)
T ss_dssp ECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGG
T ss_pred cCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhC
Confidence 36778899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccccccccCCCCCCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCC
Q 011005 86 LSRLDYLNLSSNKLSGPVPFSNNDLSSMHTVVSLSPNNGLCGNILDLPSCDTTK 139 (496)
Q Consensus 86 l~~L~~l~l~~n~l~~~~~~~~~~l~~l~~~~~~~~n~~~c~~~~~~~~~~~~~ 139 (496)
+++|+.|++++|+++|.+|.. ..+.++. -..+.+|++.||.+. ++|....
T Consensus 703 l~~L~~L~ls~N~l~g~iP~~-~~~~~~~-~~~~~gN~~Lcg~~l--~~C~~~~ 752 (768)
T 3rgz_A 703 LTMLTEIDLSNNNLSGPIPEM-GQFETFP-PAKFLNNPGLCGYPL--PRCDPSN 752 (768)
T ss_dssp CCCCSEEECCSSEEEEECCSS-SSGGGSC-GGGGCSCTEEESTTS--CCCCSCC
T ss_pred CCCCCEEECcCCcccccCCCc-hhhccCC-HHHhcCCchhcCCCC--cCCCCCc
Confidence 999999999999999999965 3344442 245789999999764 4776443
No 267
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.63 E-value=1.7e-15 Score=142.20 Aligned_cols=114 Identities=31% Similarity=0.344 Sum_probs=62.8
Q ss_pred CccccCChh-ccCCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCCCC
Q 011005 2 YKIGIIPPE-IGNLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGSIP 80 (496)
Q Consensus 2 n~~~~lp~~-~~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~ 80 (496)
|+++.+|.. |.++++|++|+|++|.+++..+..|..+++|++|+|++|++++..|..|..+++|++|+|++|++++..+
T Consensus 71 n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~ 150 (270)
T 2o6q_A 71 NKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPK 150 (270)
T ss_dssp SCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCT
T ss_pred CccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCH
Confidence 455555553 3556666666666666665444555556666666666666654444455555555555555555554333
Q ss_pred ccccCcccccccccccccCCCCCCCCCCCCCcccc
Q 011005 81 GEITKLSRLDYLNLSSNKLSGPVPFSNNDLSSMHT 115 (496)
Q Consensus 81 ~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~l~~ 115 (496)
..+..+++|+.|++++|.+++..+..|..+++|+.
T Consensus 151 ~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 185 (270)
T 2o6q_A 151 GVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKT 185 (270)
T ss_dssp TTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCE
T ss_pred hHccCCcccceeEecCCcCcEeChhHhccCCCcCE
Confidence 44555555555555555555554445555555533
No 268
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.62 E-value=9.2e-16 Score=139.25 Aligned_cols=120 Identities=23% Similarity=0.289 Sum_probs=107.1
Q ss_pred CCccccCChhccCCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCCCC
Q 011005 1 MYKIGIIPPEIGNLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGSIP 80 (496)
Q Consensus 1 ~n~~~~lp~~~~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~ 80 (496)
+|.++.+|..+. ++|+.|+|++|+|++..+..|..+++|+.|+|++|+|++..|..|..+++|+.|+|++|+|++..+
T Consensus 20 ~~~l~~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~ 97 (220)
T 2v9t_B 20 GKGLTEIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPK 97 (220)
T ss_dssp TSCCSSCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCCCCCT
T ss_pred CCCcCcCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCCccCH
Confidence 467889998765 689999999999998778899999999999999999998889999999999999999999996666
Q ss_pred ccccCcccccccccccccCCCCCCCCCCCCCccccccccCCCC
Q 011005 81 GEITKLSRLDYLNLSSNKLSGPVPFSNNDLSSMHTVVSLSPNN 123 (496)
Q Consensus 81 ~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~l~~~~~~~~n~ 123 (496)
..|..+++|+.|+|++|.|++..|..|..+++|+.+ .+++|.
T Consensus 98 ~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L-~L~~N~ 139 (220)
T 2v9t_B 98 SLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLL-SLYDNK 139 (220)
T ss_dssp TTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE-ECCSSC
T ss_pred hHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEE-ECCCCc
Confidence 678999999999999999999999999999999765 445443
No 269
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.61 E-value=2.8e-15 Score=139.10 Aligned_cols=125 Identities=25% Similarity=0.317 Sum_probs=80.3
Q ss_pred CccccCCh-hccCCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCCCC
Q 011005 2 YKIGIIPP-EIGNLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGSIP 80 (496)
Q Consensus 2 n~~~~lp~-~~~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~ 80 (496)
|+++.++. .|.++++|++|+|++|+|++..+..|..+++|++|+|++|+|++..+..|..+++|+.|+|++|++++..+
T Consensus 69 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 148 (251)
T 3m19_A 69 NQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPA 148 (251)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCT
T ss_pred CcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCH
Confidence 55666555 46666777777777777765555666666777777777777765444455666777777777777765445
Q ss_pred ccccCcccccccccccccCCCCCCCCCCCCCccccccccCCCCCCCC
Q 011005 81 GEITKLSRLDYLNLSSNKLSGPVPFSNNDLSSMHTVVSLSPNNGLCG 127 (496)
Q Consensus 81 ~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~l~~~~~~~~n~~~c~ 127 (496)
..+..+++|+.|++++|.+++..+..+..+++|+. +.+.+|+..|.
T Consensus 149 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~-L~l~~N~~~c~ 194 (251)
T 3m19_A 149 GAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQT-ITLFGNQFDCS 194 (251)
T ss_dssp TTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCE-EECCSCCBCTT
T ss_pred HHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCE-EEeeCCceeCC
Confidence 56666667777777777776666666666666643 35566665554
No 270
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.59 E-value=1.3e-15 Score=135.24 Aligned_cols=104 Identities=29% Similarity=0.462 Sum_probs=96.8
Q ss_pred CCccccCChh--ccCCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCC
Q 011005 1 MYKIGIIPPE--IGNLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGS 78 (496)
Q Consensus 1 ~n~~~~lp~~--~~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~ 78 (496)
.|+++.+|.. |.++++|++|+|++|+|++..|..|..+++|++|+|++|+|++..|..|..+++|+.|+|++|++++.
T Consensus 38 ~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 117 (192)
T 1w8a_A 38 DNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCV 117 (192)
T ss_dssp SCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEECCSSCCCEE
T ss_pred CCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCee
Confidence 4788898874 89999999999999999998899999999999999999999988888899999999999999999988
Q ss_pred CCccccCcccccccccccccCCCCCC
Q 011005 79 IPGEITKLSRLDYLNLSSNKLSGPVP 104 (496)
Q Consensus 79 ~~~~~~~l~~L~~l~l~~n~l~~~~~ 104 (496)
.|..+..+++|+.|++++|++++..+
T Consensus 118 ~~~~~~~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 118 MPGSFEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp CTTSSTTCTTCCEEECTTCCBCCSGG
T ss_pred CHHHhhcCCCCCEEEeCCCCccCcCc
Confidence 89999999999999999999996543
No 271
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.59 E-value=2.7e-15 Score=133.11 Aligned_cols=101 Identities=28% Similarity=0.362 Sum_probs=94.3
Q ss_pred CCccccCChhccCCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCCCC
Q 011005 1 MYKIGIIPPEIGNLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGSIP 80 (496)
Q Consensus 1 ~n~~~~lp~~~~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~ 80 (496)
.|+|+.+|..|.++++|+.|+|++|.|++..+..|..+++|+.|+|++|+|++..|..|..+++|+.|+|++|+|++..+
T Consensus 40 ~n~i~~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~ 119 (193)
T 2wfh_A 40 GNQFTLVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPE 119 (193)
T ss_dssp SSCCCSCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCCCBCCT
T ss_pred CCcCchhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCccCEeCHHHhCCCCCCCEEECCCCCCCeeCh
Confidence 48899999999999999999999999998888899999999999999999998878889999999999999999996666
Q ss_pred ccccCcccccccccccccCCC
Q 011005 81 GEITKLSRLDYLNLSSNKLSG 101 (496)
Q Consensus 81 ~~~~~l~~L~~l~l~~n~l~~ 101 (496)
..|..+++|+.|++++|++..
T Consensus 120 ~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 120 GAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp TTTTTCTTCCEEECCSSCEEC
T ss_pred hhhhcCccccEEEeCCCCeec
Confidence 679999999999999999974
No 272
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.58 E-value=4e-15 Score=129.13 Aligned_cols=106 Identities=27% Similarity=0.351 Sum_probs=53.6
Q ss_pred CEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCCCCccccCcccccccccccc
Q 011005 18 IKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGSIPGEITKLSRLDYLNLSSN 97 (496)
Q Consensus 18 ~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~l~~L~~l~l~~n 97 (496)
+.|++++|+++ .+|..+. ++|+.|+|++|+|++..|..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|
T Consensus 12 ~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N 88 (170)
T 3g39_A 12 TTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDN 88 (170)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCC
Confidence 44555555555 3343332 45555555555555444455555555555555555555444444455555555555555
Q ss_pred cCCCCCCCCCCCCCccccccccCCCCCCCC
Q 011005 98 KLSGPVPFSNNDLSSMHTVVSLSPNNGLCG 127 (496)
Q Consensus 98 ~l~~~~~~~~~~l~~l~~~~~~~~n~~~c~ 127 (496)
+|++..+..|..+++|+. +.+.+|++.|.
T Consensus 89 ~l~~~~~~~~~~l~~L~~-L~L~~N~~~c~ 117 (170)
T 3g39_A 89 QLKSIPRGAFDNLKSLTH-IWLLNNPWDCA 117 (170)
T ss_dssp CCCCCCTTTTTTCTTCCE-EECCSSCBCTT
T ss_pred ccCEeCHHHhcCCCCCCE-EEeCCCCCCCC
Confidence 555544445555555532 34445554443
No 273
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.58 E-value=4.1e-15 Score=129.54 Aligned_cols=106 Identities=23% Similarity=0.295 Sum_probs=59.9
Q ss_pred CEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCCCCccccCcccccccccccc
Q 011005 18 IKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGSIPGEITKLSRLDYLNLSSN 97 (496)
Q Consensus 18 ~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~l~~L~~l~l~~n 97 (496)
+.+++++|+++ .+|..+. ++|+.|+|++|+|++..|..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 45666666665 4444443 55666666666666555555666666666666666666433344556666666666666
Q ss_pred cCCCCCCCCCCCCCccccccccCCCCCCCC
Q 011005 98 KLSGPVPFSNNDLSSMHTVVSLSPNNGLCG 127 (496)
Q Consensus 98 ~l~~~~~~~~~~l~~l~~~~~~~~n~~~c~ 127 (496)
+|++..+..|..+++|+. +.+.+|++.|.
T Consensus 92 ~l~~l~~~~~~~l~~L~~-L~L~~N~~~c~ 120 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTH-IYLYNNPWDCE 120 (174)
T ss_dssp CCCCCCTTTTTTCTTCSE-EECCSSCBCTT
T ss_pred ccceeCHHHhccccCCCE-EEeCCCCcccc
Confidence 666555555566666633 34555555543
No 274
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.58 E-value=1.2e-15 Score=146.41 Aligned_cols=124 Identities=34% Similarity=0.516 Sum_probs=90.2
Q ss_pred Cccc-cCChhccCCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCCCC
Q 011005 2 YKIG-IIPPEIGNLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGSIP 80 (496)
Q Consensus 2 n~~~-~lp~~~~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~ 80 (496)
|++. .+|..+..++ |+.|+|++|.+++..|..|..+++|+.|+|++|++++.+|. +..+++|++|+|++|++++.+|
T Consensus 184 N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p 261 (313)
T 1ogq_A 184 NRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLP 261 (313)
T ss_dssp SEEEEECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCC
T ss_pred CeeeccCChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCC
Confidence 3444 3555555554 66666666666666667777777777777777777754443 7777888888888888887788
Q ss_pred ccccCcccccccccccccCCCCCCCCCCCCCccccccccCCCCCCCCCC
Q 011005 81 GEITKLSRLDYLNLSSNKLSGPVPFSNNDLSSMHTVVSLSPNNGLCGNI 129 (496)
Q Consensus 81 ~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~l~~~~~~~~n~~~c~~~ 129 (496)
..+..+++|+.|++++|++++.+|.. ..+++|+ .+.+.+|++.|+.+
T Consensus 262 ~~l~~l~~L~~L~Ls~N~l~~~ip~~-~~l~~L~-~l~l~~N~~lc~~p 308 (313)
T 1ogq_A 262 QGLTQLKFLHSLNVSFNNLCGEIPQG-GNLQRFD-VSAYANNKCLCGSP 308 (313)
T ss_dssp GGGGGCTTCCEEECCSSEEEEECCCS-TTGGGSC-GGGTCSSSEEESTT
T ss_pred hHHhcCcCCCEEECcCCcccccCCCC-ccccccC-hHHhcCCCCccCCC
Confidence 88888888888888888888887776 6777774 45678888888853
No 275
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.58 E-value=1.1e-15 Score=129.61 Aligned_cols=113 Identities=22% Similarity=0.223 Sum_probs=88.2
Q ss_pred Cccc--cCChhccCCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCC-
Q 011005 2 YKIG--IIPPEIGNLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGS- 78 (496)
Q Consensus 2 n~~~--~lp~~~~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~- 78 (496)
|+++ .+|..+..+++|+.|+|++|.+++. ..+..+++|++|+|++|++++.+|..+..+++|+.|++++|++++.
T Consensus 27 n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ls~N~i~~~~ 104 (149)
T 2je0_A 27 SRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLNLSGNKIKDLS 104 (149)
T ss_dssp CBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEECTTSCCCSHH
T ss_pred CcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEECCCCcCCChH
Confidence 5666 6887778888888888888888855 6788888888888888888866777777788888888888888842
Q ss_pred CCccccCcccccccccccccCCCCCC---CCCCCCCccccc
Q 011005 79 IPGEITKLSRLDYLNLSSNKLSGPVP---FSNNDLSSMHTV 116 (496)
Q Consensus 79 ~~~~~~~l~~L~~l~l~~n~l~~~~~---~~~~~l~~l~~~ 116 (496)
.+..+..+++|+.|++++|++++..+ ..+..+++|+.+
T Consensus 105 ~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L 145 (149)
T 2je0_A 105 TIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYL 145 (149)
T ss_dssp HHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEE
T ss_pred HHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccc
Confidence 23678888888888888888886655 467777777554
No 276
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.58 E-value=3.2e-15 Score=144.38 Aligned_cols=100 Identities=23% Similarity=0.326 Sum_probs=61.5
Q ss_pred CCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCCCCccccCcccccccc
Q 011005 14 LKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGSIPGEITKLSRLDYLN 93 (496)
Q Consensus 14 l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~l~~L~~l~ 93 (496)
+++|++|+|++|+|+ .+|..++.+++|+.|+|++|+++ .+|+.+..+++|+.|+|++|.+.+.+|..+..+++|+.|+
T Consensus 182 l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~-~l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~ 259 (328)
T 4fcg_A 182 LVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLS-ALGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLI 259 (328)
T ss_dssp STTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCC-CCCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEE
T ss_pred CCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCC-cCchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEE
Confidence 666666666666665 55555666666666666666666 3455566666666666666666556666666666666666
Q ss_pred cccccCCCCCCCCCCCCCcccc
Q 011005 94 LSSNKLSGPVPFSNNDLSSMHT 115 (496)
Q Consensus 94 l~~n~l~~~~~~~~~~l~~l~~ 115 (496)
+++|++.+.+|..+..+++|+.
T Consensus 260 L~~n~~~~~~p~~~~~l~~L~~ 281 (328)
T 4fcg_A 260 LKDCSNLLTLPLDIHRLTQLEK 281 (328)
T ss_dssp CTTCTTCCBCCTTGGGCTTCCE
T ss_pred CCCCCchhhcchhhhcCCCCCE
Confidence 6666666666666666666643
No 277
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.58 E-value=8.6e-15 Score=133.70 Aligned_cols=118 Identities=27% Similarity=0.314 Sum_probs=104.2
Q ss_pred CCccccCChhccCCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCCCC
Q 011005 1 MYKIGIIPPEIGNLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGSIP 80 (496)
Q Consensus 1 ~n~~~~lp~~~~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~ 80 (496)
.|+++.+|..+. ++|++|+|++|+|++..|..|..+++|+.|+|++|+|+...+..|..+++|+.|+|++|+|++..+
T Consensus 28 ~~~l~~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~ 105 (229)
T 3e6j_A 28 SKRHASVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPS 105 (229)
T ss_dssp TSCCSSCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCT
T ss_pred CCCcCccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCcCCccCh
Confidence 367888998665 899999999999999889999999999999999999996555678999999999999999997767
Q ss_pred ccccCcccccccccccccCCCCCCCCCCCCCccccccccCCC
Q 011005 81 GEITKLSRLDYLNLSSNKLSGPVPFSNNDLSSMHTVVSLSPN 122 (496)
Q Consensus 81 ~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~l~~~~~~~~n 122 (496)
..|..+++|+.|++++|.|+ .+|..+..+++|+.+ .+++|
T Consensus 106 ~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L-~L~~N 145 (229)
T 3e6j_A 106 AVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHL-ALDQN 145 (229)
T ss_dssp TTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEE-ECCSS
T ss_pred hHhCcchhhCeEeccCCccc-ccCcccccCCCCCEE-ECCCC
Confidence 77899999999999999999 778888999999765 44544
No 278
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.57 E-value=8.1e-16 Score=156.71 Aligned_cols=121 Identities=22% Similarity=0.229 Sum_probs=60.6
Q ss_pred CccccCCh-hccCCCCCCEEeccCCccCCCCCccCC-CCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCCC
Q 011005 2 YKIGIIPP-EIGNLKNLIKLDVGSNSLIGPIPSALG-SLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGSI 79 (496)
Q Consensus 2 n~~~~lp~-~~~~l~~L~~L~l~~n~i~~~~p~~~~-~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~ 79 (496)
|+++.+++ .++++++|+.|+|++|.|++..|..+. .+++|+.|+|++|.|++. | .+..+++|+.|+|++|++++ +
T Consensus 130 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~-~-~~~~l~~L~~L~Ls~N~l~~-~ 206 (487)
T 3oja_A 130 NKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-K-GQVVFAKLKTLDLSSNKLAF-M 206 (487)
T ss_dssp SCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-E-CCCCCTTCCEEECCSSCCCE-E
T ss_pred CCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccc-c-ccccCCCCCEEECCCCCCCC-C
Confidence 44444432 455555555555555555554444443 455555555555555532 2 22235555555555555553 3
Q ss_pred CccccCcccccccccccccCCCCCCCCCCCCCccccccccCCCCCCCC
Q 011005 80 PGEITKLSRLDYLNLSSNKLSGPVPFSNNDLSSMHTVVSLSPNNGLCG 127 (496)
Q Consensus 80 ~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~l~~~~~~~~n~~~c~ 127 (496)
|..+..+++|+.|++++|.|++ +|..+..+++|.. +.+++|+..|+
T Consensus 207 ~~~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~-L~l~~N~l~c~ 252 (487)
T 3oja_A 207 GPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEH-FDLRGNGFHCG 252 (487)
T ss_dssp CGGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCE-EECTTCCBCHH
T ss_pred CHhHcCCCCccEEEecCCcCcc-cchhhccCCCCCE-EEcCCCCCcCc
Confidence 3335555555555555555553 3444555555532 34445554443
No 279
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.57 E-value=3e-15 Score=129.77 Aligned_cols=114 Identities=25% Similarity=0.232 Sum_probs=98.9
Q ss_pred CCccc--cCChhccCCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCC
Q 011005 1 MYKIG--IIPPEIGNLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGS 78 (496)
Q Consensus 1 ~n~~~--~lp~~~~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~ 78 (496)
.|+++ .+|..+..+++|+.|+|++|.|++. ..+..+++|++|+|++|++++.+|..+..+++|+.|+|++|++++.
T Consensus 33 ~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 110 (168)
T 2ell_A 33 NCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLNLSGNKLKDI 110 (168)
T ss_dssp SCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEECBSSSCCSS
T ss_pred CCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEeccCCccCcc
Confidence 36777 8998889999999999999999865 7899999999999999999977888888899999999999999953
Q ss_pred C-CccccCcccccccccccccCCCCCC---CCCCCCCccccc
Q 011005 79 I-PGEITKLSRLDYLNLSSNKLSGPVP---FSNNDLSSMHTV 116 (496)
Q Consensus 79 ~-~~~~~~l~~L~~l~l~~n~l~~~~~---~~~~~l~~l~~~ 116 (496)
. +..+..+++|+.|++++|++++..+ ..+..+++|+.+
T Consensus 111 ~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L 152 (168)
T 2ell_A 111 STLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYL 152 (168)
T ss_dssp GGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEE
T ss_pred hhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEe
Confidence 2 2789999999999999999997665 478888888665
No 280
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.56 E-value=1.4e-15 Score=145.89 Aligned_cols=120 Identities=34% Similarity=0.584 Sum_probs=105.5
Q ss_pred Cccc---cCChhccCCCCCCEEeccC-CccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCC
Q 011005 2 YKIG---IIPPEIGNLKNLIKLDVGS-NSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQG 77 (496)
Q Consensus 2 n~~~---~lp~~~~~l~~L~~L~l~~-n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~ 77 (496)
|+++ .+|..|.++++|++|+|++ |.+.+.+|..|+++++|++|+|++|++++.+|..+..+++|++|+|++|++++
T Consensus 60 ~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 139 (313)
T 1ogq_A 60 LNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSG 139 (313)
T ss_dssp CCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEES
T ss_pred CCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCC
Confidence 5565 5888999999999999994 99998999999999999999999999998899999999999999999999998
Q ss_pred CCCccccCcccccccccccccCCCCCCCCCCCCC-ccccccccCCC
Q 011005 78 SIPGEITKLSRLDYLNLSSNKLSGPVPFSNNDLS-SMHTVVSLSPN 122 (496)
Q Consensus 78 ~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~-~l~~~~~~~~n 122 (496)
.+|..+..+++|+.|++++|.+++.+|..+..++ +|+.+ .++.|
T Consensus 140 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L-~L~~N 184 (313)
T 1ogq_A 140 TLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSM-TISRN 184 (313)
T ss_dssp CCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEE-ECCSS
T ss_pred cCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEE-ECcCC
Confidence 8999999999999999999999988999988887 77554 44444
No 281
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.56 E-value=6.3e-15 Score=133.71 Aligned_cols=119 Identities=22% Similarity=0.220 Sum_probs=104.8
Q ss_pred CCccccCChhccCCCCCCEEeccCCccCCCCC-ccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCCC
Q 011005 1 MYKIGIIPPEIGNLKNLIKLDVGSNSLIGPIP-SALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGSI 79 (496)
Q Consensus 1 ~n~~~~lp~~~~~l~~L~~L~l~~n~i~~~~p-~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~ 79 (496)
.|.++.+|..+. +.++.|+|++|+|++..| ..|..+++|+.|+|++|+|++..|..|..+++|+.|+|++|++++..
T Consensus 20 ~n~l~~iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~ 97 (220)
T 2v70_A 20 NQKLNKIPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQ 97 (220)
T ss_dssp SSCCSSCCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCC
T ss_pred CCCcccCccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCccCccC
Confidence 378889998764 357899999999997655 45899999999999999999777779999999999999999999877
Q ss_pred CccccCcccccccccccccCCCCCCCCCCCCCccccccccCCC
Q 011005 80 PGEITKLSRLDYLNLSSNKLSGPVPFSNNDLSSMHTVVSLSPN 122 (496)
Q Consensus 80 ~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~l~~~~~~~~n 122 (496)
+..|..+++|+.|+|++|.|++..|..|..+++|+.+ .++.|
T Consensus 98 ~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L-~L~~N 139 (220)
T 2v70_A 98 HKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLL-SLYDN 139 (220)
T ss_dssp GGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEE-ECTTS
T ss_pred HhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEE-ECCCC
Confidence 8889999999999999999999999999999999765 44444
No 282
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.56 E-value=3.8e-15 Score=140.93 Aligned_cols=120 Identities=25% Similarity=0.268 Sum_probs=91.2
Q ss_pred Cc-cccC-ChhccCCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCCC
Q 011005 2 YK-IGII-PPEIGNLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGSI 79 (496)
Q Consensus 2 n~-~~~l-p~~~~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~ 79 (496)
|+ ++.+ |..|..+++|++|+|++|.+++..|..|..+++|++|+|++|++++..+..+..+++|+.|+|++|++++..
T Consensus 90 n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 169 (285)
T 1ozn_A 90 NAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVP 169 (285)
T ss_dssp CTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEEC
T ss_pred CCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccC
Confidence 44 6776 447788888888888888888777777888888888888888888655566788888888888888887555
Q ss_pred CccccCcccccccccccccCCCCCCCCCCCCCccccccccCCC
Q 011005 80 PGEITKLSRLDYLNLSSNKLSGPVPFSNNDLSSMHTVVSLSPN 122 (496)
Q Consensus 80 ~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~l~~~~~~~~n 122 (496)
+..+..+++|+.|++++|.+++..|..+..+++|+.+ .+++|
T Consensus 170 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L-~l~~n 211 (285)
T 1ozn_A 170 ERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTL-YLFAN 211 (285)
T ss_dssp TTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEE-ECCSS
T ss_pred HHHhcCccccCEEECCCCcccccCHhHccCcccccEe-eCCCC
Confidence 5567788888888888888887777778777777554 34443
No 283
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.55 E-value=1.9e-14 Score=135.06 Aligned_cols=114 Identities=28% Similarity=0.299 Sum_probs=77.7
Q ss_pred CccccCChhccCCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCCCCc
Q 011005 2 YKIGIIPPEIGNLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGSIPG 81 (496)
Q Consensus 2 n~~~~lp~~~~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~ 81 (496)
|++..++ .+..+++|++|+|++|.+++..+..|..+++|++|+|++|++++..|..+..+++|+.|+|++|++++..+.
T Consensus 73 n~l~~~~-~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 151 (272)
T 3rfs_A 73 NKLHDIS-ALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKG 151 (272)
T ss_dssp SCCCCCG-GGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTT
T ss_pred CCCCCch-hhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHH
Confidence 5555543 566677777777777777766666667777777777777777755555567777777777777777755555
Q ss_pred cccCcccccccccccccCCCCCCCCCCCCCccccc
Q 011005 82 EITKLSRLDYLNLSSNKLSGPVPFSNNDLSSMHTV 116 (496)
Q Consensus 82 ~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~l~~~ 116 (496)
.+..+++|+.|++++|.+++..+..+..+++|+.+
T Consensus 152 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 186 (272)
T 3rfs_A 152 VFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDL 186 (272)
T ss_dssp TTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred HhccCccCCEEECCCCCcCccCHHHhcCCccCCEE
Confidence 56677777777777777776666666777777554
No 284
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.55 E-value=2.2e-14 Score=134.58 Aligned_cols=117 Identities=24% Similarity=0.287 Sum_probs=89.9
Q ss_pred CCccccCCh-hccCCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCCC
Q 011005 1 MYKIGIIPP-EIGNLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGSI 79 (496)
Q Consensus 1 ~n~~~~lp~-~~~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~ 79 (496)
.|+++.+|. .|.++++|++|+|++|.|+...+..|..+++|++|+|++|++++..+..|..+++|+.|+|++|++++..
T Consensus 46 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 125 (270)
T 2o6q_A 46 SNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLP 125 (270)
T ss_dssp SSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCC
T ss_pred CCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeC
Confidence 366777776 6778888888888888888665666777888888888888888655566778888888888888888666
Q ss_pred CccccCcccccccccccccCCCCCCCCCCCCCcccccc
Q 011005 80 PGEITKLSRLDYLNLSSNKLSGPVPFSNNDLSSMHTVV 117 (496)
Q Consensus 80 ~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~l~~~~ 117 (496)
+..|..+++|+.|++++|.+++..+..|..+++|+.+.
T Consensus 126 ~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 163 (270)
T 2o6q_A 126 PRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELR 163 (270)
T ss_dssp TTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred HHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeE
Confidence 66778888888888888888877777777777776543
No 285
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.54 E-value=1e-14 Score=147.65 Aligned_cols=126 Identities=25% Similarity=0.235 Sum_probs=112.0
Q ss_pred CccccC-ChhccCCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCCCC
Q 011005 2 YKIGII-PPEIGNLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGSIP 80 (496)
Q Consensus 2 n~~~~l-p~~~~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~ 80 (496)
|++..+ |..++++++|+.|+|++|++++..|..|..+++|+.|+|++|+|++..|..+..+++|+.|+|++|++++..|
T Consensus 285 n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 364 (455)
T 3v47_A 285 SKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGD 364 (455)
T ss_dssp SCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECT
T ss_pred ccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccCh
Confidence 555554 5578999999999999999998888899999999999999999998778899999999999999999998788
Q ss_pred ccccCcccccccccccccCCCCCCCCCCCCCccccccccCCCCCCCCC
Q 011005 81 GEITKLSRLDYLNLSSNKLSGPVPFSNNDLSSMHTVVSLSPNNGLCGN 128 (496)
Q Consensus 81 ~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~l~~~~~~~~n~~~c~~ 128 (496)
..+..+++|+.|++++|++++..+..+..+++|+. +.+++|+..|..
T Consensus 365 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~-L~l~~N~l~~~~ 411 (455)
T 3v47_A 365 QSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQK-IWLHTNPWDCSC 411 (455)
T ss_dssp TTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCE-EECCSSCBCCCT
T ss_pred hhccccccccEEECCCCccccCCHhHhccCCcccE-EEccCCCcccCC
Confidence 99999999999999999999888888899999965 567888887764
No 286
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.54 E-value=2.8e-15 Score=146.85 Aligned_cols=115 Identities=27% Similarity=0.187 Sum_probs=86.9
Q ss_pred CCccccCChh-cc-CCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCC
Q 011005 1 MYKIGIIPPE-IG-NLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGS 78 (496)
Q Consensus 1 ~n~~~~lp~~-~~-~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~ 78 (496)
.|+|+.++.. +. ++++|+.|+|++|+|++..+..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|+|++.
T Consensus 48 ~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~ 127 (361)
T 2xot_A 48 HNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVV 127 (361)
T ss_dssp SSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEE
T ss_pred CCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEECCCCcccEE
Confidence 4777777774 55 788888888888888877677788888888888888888866566788888888888888888866
Q ss_pred CCccccCcccccccccccccCCCCCCCCC---CCCCcccc
Q 011005 79 IPGEITKLSRLDYLNLSSNKLSGPVPFSN---NDLSSMHT 115 (496)
Q Consensus 79 ~~~~~~~l~~L~~l~l~~n~l~~~~~~~~---~~l~~l~~ 115 (496)
.|..|..+++|+.|+|++|.|++..+..| ..+++|+.
T Consensus 128 ~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~ 167 (361)
T 2xot_A 128 DRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLML 167 (361)
T ss_dssp CTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCE
T ss_pred CHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCE
Confidence 67778888888888888888886555555 44566543
No 287
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.54 E-value=2.7e-14 Score=123.93 Aligned_cols=100 Identities=24% Similarity=0.283 Sum_probs=91.1
Q ss_pred CCccccCChhccCCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCCCC
Q 011005 1 MYKIGIIPPEIGNLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGSIP 80 (496)
Q Consensus 1 ~n~~~~lp~~~~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~ 80 (496)
+|+++.+|..+. ++|+.|+|++|+|++..|..|..+++|++|+|++|+|++..|..|..+++|+.|+|++|+|++..+
T Consensus 18 ~n~l~~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~ 95 (170)
T 3g39_A 18 GKSLASVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLKSIPR 95 (170)
T ss_dssp TSCCSSCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCT
T ss_pred CCCcCccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCCccCEeCH
Confidence 478999998774 899999999999998889999999999999999999997666678999999999999999997667
Q ss_pred ccccCcccccccccccccCCCC
Q 011005 81 GEITKLSRLDYLNLSSNKLSGP 102 (496)
Q Consensus 81 ~~~~~l~~L~~l~l~~n~l~~~ 102 (496)
..|..+++|+.|+|++|+++..
T Consensus 96 ~~~~~l~~L~~L~L~~N~~~c~ 117 (170)
T 3g39_A 96 GAFDNLKSLTHIWLLNNPWDCA 117 (170)
T ss_dssp TTTTTCTTCCEEECCSSCBCTT
T ss_pred HHhcCCCCCCEEEeCCCCCCCC
Confidence 7799999999999999999854
No 288
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.53 E-value=2.5e-14 Score=135.47 Aligned_cols=104 Identities=29% Similarity=0.355 Sum_probs=61.6
Q ss_pred cCCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCCCCccccCcccccc
Q 011005 12 GNLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGSIPGEITKLSRLDY 91 (496)
Q Consensus 12 ~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~l~~L~~ 91 (496)
+.+++|+.|+|++|+|+ .+|..+..+++|++|+|++|+|++..|..|..+++|+.|+|++|++++..+..|..+++|+.
T Consensus 74 ~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 152 (290)
T 1p9a_G 74 GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEK 152 (290)
T ss_dssp SCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCE
T ss_pred CCCCcCCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCE
Confidence 34455555555555555 44555566666666666666666544455666666666666666666444455566666666
Q ss_pred cccccccCCCCCCCCCCCCCccccc
Q 011005 92 LNLSSNKLSGPVPFSNNDLSSMHTV 116 (496)
Q Consensus 92 l~l~~n~l~~~~~~~~~~l~~l~~~ 116 (496)
|++++|+|++..+..|..+++|+.+
T Consensus 153 L~L~~N~l~~l~~~~~~~l~~L~~L 177 (290)
T 1p9a_G 153 LSLANNNLTELPAGLLNGLENLDTL 177 (290)
T ss_dssp EECTTSCCSCCCTTTTTTCTTCCEE
T ss_pred EECCCCcCCccCHHHhcCcCCCCEE
Confidence 6666666665555555666666443
No 289
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.53 E-value=1.2e-14 Score=140.42 Aligned_cols=111 Identities=23% Similarity=0.379 Sum_probs=71.0
Q ss_pred CccccCChhccCCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcC---------CcccCeecccc
Q 011005 2 YKIGIIPPEIGNLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIAS---------MKYLTQLDLSN 72 (496)
Q Consensus 2 n~~~~lp~~~~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~---------l~~L~~l~l~~ 72 (496)
|++..+|..++++++|++|+|++|.++ .+|..|.++++|++|+|++|++.+.+|..+.. +++|+.|+|++
T Consensus 114 n~l~~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~ 192 (328)
T 4fcg_A 114 AGLMELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEW 192 (328)
T ss_dssp SCCCCCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEE
T ss_pred CCccchhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchhhhccCCCCCEEECcC
Confidence 566667766777777777777777776 55666666777777777766666666655543 66666666666
Q ss_pred cccCCCCCccccCcccccccccccccCCCCCCCCCCCCCcccc
Q 011005 73 NNIQGSIPGEITKLSRLDYLNLSSNKLSGPVPFSNNDLSSMHT 115 (496)
Q Consensus 73 N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~l~~ 115 (496)
|+++ .+|..+..+++|+.|++++|.+++ +|..+..+++|+.
T Consensus 193 n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~~l~~L~~ 233 (328)
T 4fcg_A 193 TGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEE 233 (328)
T ss_dssp ECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGGGGGCTTCCE
T ss_pred CCcC-cchHhhcCCCCCCEEEccCCCCCc-CchhhccCCCCCE
Confidence 6666 556666666666666666666663 3444555666544
No 290
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.53 E-value=4.9e-14 Score=126.66 Aligned_cols=118 Identities=28% Similarity=0.300 Sum_probs=102.5
Q ss_pred CccccCChhccCCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCCCCc
Q 011005 2 YKIGIIPPEIGNLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGSIPG 81 (496)
Q Consensus 2 n~~~~lp~~~~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~ 81 (496)
+.++.+|..+ .++|++|+|++|++++..+..|..+++|++|+|++|+|++..+..|..+++|++|+|++|++++..+.
T Consensus 17 ~~l~~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~ 94 (208)
T 2o6s_A 17 QGRTSVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNG 94 (208)
T ss_dssp SCCSSCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTT
T ss_pred CCccCCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHh
Confidence 5677788755 46899999999999977777899999999999999999976666789999999999999999976667
Q ss_pred cccCcccccccccccccCCCCCCCCCCCCCccccccccCCC
Q 011005 82 EITKLSRLDYLNLSSNKLSGPVPFSNNDLSSMHTVVSLSPN 122 (496)
Q Consensus 82 ~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~l~~~~~~~~n 122 (496)
.+..+++|+.|++++|.+++..+..|..+++|+.+ .+++|
T Consensus 95 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L-~l~~N 134 (208)
T 2o6s_A 95 VFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDL-RLYQN 134 (208)
T ss_dssp TTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE-ECCSS
T ss_pred HhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEE-ECCCC
Confidence 78999999999999999998888889999999765 44444
No 291
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.52 E-value=1.4e-14 Score=152.85 Aligned_cols=115 Identities=19% Similarity=0.201 Sum_probs=69.7
Q ss_pred CccccCCh-hccCCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCCCC
Q 011005 2 YKIGIIPP-EIGNLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGSIP 80 (496)
Q Consensus 2 n~~~~lp~-~~~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~ 80 (496)
|+|+.+|+ .|.++++|++|+|++|+|+++.|+.|.++++|++|+|++|+|++..+..|.+|++|++|+|++|++++..+
T Consensus 62 N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~ 141 (635)
T 4g8a_A 62 NPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLEN 141 (635)
T ss_dssp SCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCSTT
T ss_pred CCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCCCh
Confidence 55666654 56666666666666666665555566666666666666666664444456666666666666666664444
Q ss_pred ccccCcccccccccccccCCC-CCCCCCCCCCccccc
Q 011005 81 GEITKLSRLDYLNLSSNKLSG-PVPFSNNDLSSMHTV 116 (496)
Q Consensus 81 ~~~~~l~~L~~l~l~~n~l~~-~~~~~~~~l~~l~~~ 116 (496)
..|+++++|+.|++++|.+++ ..|..+..+++|+.+
T Consensus 142 ~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L 178 (635)
T 4g8a_A 142 FPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHL 178 (635)
T ss_dssp CCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEE
T ss_pred hhhhcCcccCeeccccCccccCCCchhhccchhhhhh
Confidence 556666666666666666654 245555566666443
No 292
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.52 E-value=2.5e-14 Score=125.10 Aligned_cols=104 Identities=24% Similarity=0.318 Sum_probs=92.6
Q ss_pred CCccccCCh-hccCCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCCC
Q 011005 1 MYKIGIIPP-EIGNLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGSI 79 (496)
Q Consensus 1 ~n~~~~lp~-~~~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~ 79 (496)
+|+++.+|. .|.++++|++|+|++|+|++..+..|..+++|+.|+|++|+|++..+..+..+++|+.|+|++|++++..
T Consensus 37 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~ 116 (177)
T 2o6r_A 37 SNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVP 116 (177)
T ss_dssp SSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCC
T ss_pred CCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEECcCCcceEeC
Confidence 478888887 5789999999999999999777778899999999999999999776667899999999999999999666
Q ss_pred CccccCcccccccccccccCCCCCC
Q 011005 80 PGEITKLSRLDYLNLSSNKLSGPVP 104 (496)
Q Consensus 80 ~~~~~~l~~L~~l~l~~n~l~~~~~ 104 (496)
+..+..+++|+.|++++|++++..|
T Consensus 117 ~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 117 DGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp TTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred HHHhcCCcccCEEEecCCCeeccCc
Confidence 6667899999999999999996543
No 293
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.52 E-value=5.1e-14 Score=122.59 Aligned_cols=99 Identities=25% Similarity=0.344 Sum_probs=89.7
Q ss_pred CCccccCChhccCCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCCCC
Q 011005 1 MYKIGIIPPEIGNLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGSIP 80 (496)
Q Consensus 1 ~n~~~~lp~~~~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~ 80 (496)
.|+++.+|..+. ++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++..+..|..+++|+.|+|++|+|++..+
T Consensus 21 ~n~l~~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~l~~l~~ 98 (174)
T 2r9u_A 21 NIRLASVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNHLKSIPR 98 (174)
T ss_dssp SSCCSSCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCT
T ss_pred CCCCCccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCCccceeCH
Confidence 478999999775 899999999999998889999999999999999999997555567999999999999999996666
Q ss_pred ccccCcccccccccccccCCC
Q 011005 81 GEITKLSRLDYLNLSSNKLSG 101 (496)
Q Consensus 81 ~~~~~l~~L~~l~l~~n~l~~ 101 (496)
..|..+++|+.|+|++|++..
T Consensus 99 ~~~~~l~~L~~L~L~~N~~~c 119 (174)
T 2r9u_A 99 GAFDNLKSLTHIYLYNNPWDC 119 (174)
T ss_dssp TTTTTCTTCSEEECCSSCBCT
T ss_pred HHhccccCCCEEEeCCCCccc
Confidence 679999999999999999984
No 294
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.51 E-value=1.4e-14 Score=141.82 Aligned_cols=119 Identities=24% Similarity=0.210 Sum_probs=102.1
Q ss_pred CCccccCChhccCCCCCCEEeccCCccCCCCCccCC-CCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCCC
Q 011005 1 MYKIGIIPPEIGNLKNLIKLDVGSNSLIGPIPSALG-SLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGSI 79 (496)
Q Consensus 1 ~n~~~~lp~~~~~l~~L~~L~l~~n~i~~~~p~~~~-~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~ 79 (496)
.|+++.+|..+. +.++.|+|++|+|++..+..|. .+++|+.|+|++|+|++..|..|..+++|+.|+|++|+|++..
T Consensus 27 ~~~l~~iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~ 104 (361)
T 2xot_A 27 KQQLPNVPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLD 104 (361)
T ss_dssp SSCCSSCCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEEC
T ss_pred CCCcCccCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCCcCCcCC
Confidence 367888888664 3689999999999987777787 8999999999999999777778999999999999999999766
Q ss_pred CccccCcccccccccccccCCCCCCCCCCCCCccccccccCCC
Q 011005 80 PGEITKLSRLDYLNLSSNKLSGPVPFSNNDLSSMHTVVSLSPN 122 (496)
Q Consensus 80 ~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~l~~~~~~~~n 122 (496)
+..|..+++|+.|+|++|.|++..|..|..+++|+.| .+++|
T Consensus 105 ~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L-~L~~N 146 (361)
T 2xot_A 105 EFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKL-YLSQN 146 (361)
T ss_dssp TTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEE-ECCSS
T ss_pred HHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEE-ECCCC
Confidence 7789999999999999999998889999999999765 44444
No 295
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.51 E-value=2.4e-14 Score=144.26 Aligned_cols=124 Identities=27% Similarity=0.285 Sum_probs=104.2
Q ss_pred CccccCCh-hccCCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCCCC
Q 011005 2 YKIGIIPP-EIGNLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGSIP 80 (496)
Q Consensus 2 n~~~~lp~-~~~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~ 80 (496)
|.++.+|. .|.++++|+.|+|++|+++ .+| .+..+++|+.|+|++|+|++..|..|.++++|+.|+|++|++++..+
T Consensus 171 ~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 248 (440)
T 3zyj_A 171 KRLSYISEGAFEGLSNLRYLNLAMCNLR-EIP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIER 248 (440)
T ss_dssp TTCCEECTTTTTTCSSCCEEECTTSCCS-SCC-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECT
T ss_pred CCcceeCcchhhcccccCeecCCCCcCc-ccc-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEECh
Confidence 44555665 5778888888888888888 555 47888899999999999998778889999999999999999997778
Q ss_pred ccccCcccccccccccccCCCCCCCCCCCCCccccccccCCCCCCCCC
Q 011005 81 GEITKLSRLDYLNLSSNKLSGPVPFSNNDLSSMHTVVSLSPNNGLCGN 128 (496)
Q Consensus 81 ~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~l~~~~~~~~n~~~c~~ 128 (496)
..|..+++|+.|+|++|+|++..+..|..+++|+. +.+++|++.|+.
T Consensus 249 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~-L~L~~Np~~CdC 295 (440)
T 3zyj_A 249 NAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLER-IHLHHNPWNCNC 295 (440)
T ss_dssp TSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCE-EECCSSCEECSS
T ss_pred hhhcCCCCCCEEECCCCCCCccChhHhccccCCCE-EEcCCCCccCCC
Confidence 88999999999999999999888888899998854 578889988864
No 296
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.51 E-value=2.1e-14 Score=151.38 Aligned_cols=126 Identities=25% Similarity=0.265 Sum_probs=111.5
Q ss_pred CccccCCh-hccCCCCCCEEeccCCccC-CCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCCC
Q 011005 2 YKIGIIPP-EIGNLKNLIKLDVGSNSLI-GPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGSI 79 (496)
Q Consensus 2 n~~~~lp~-~~~~l~~L~~L~l~~n~i~-~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~ 79 (496)
|++..++. .+..+++|+.|+|++|++. +..|+.|..+++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++..
T Consensus 455 n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~ 534 (635)
T 4g8a_A 455 THTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLD 534 (635)
T ss_dssp SCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCC
T ss_pred cccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCC
Confidence 55666554 6788999999999999754 457889999999999999999999888999999999999999999999878
Q ss_pred CccccCcccccccccccccCCCCCCCCCCCC-CccccccccCCCCCCCCC
Q 011005 80 PGEITKLSRLDYLNLSSNKLSGPVPFSNNDL-SSMHTVVSLSPNNGLCGN 128 (496)
Q Consensus 80 ~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l-~~l~~~~~~~~n~~~c~~ 128 (496)
|..|..+++|+.|++++|+|++..|..+..+ ++|+ .+.+++||+.|+.
T Consensus 535 ~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~-~L~L~~Np~~C~C 583 (635)
T 4g8a_A 535 TFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLA-FLNLTQNDFACTC 583 (635)
T ss_dssp CGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCC-EEECTTCCBCCSG
T ss_pred hhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCC-EEEeeCCCCcccC
Confidence 8889999999999999999999999999988 5784 4688999999974
No 297
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.51 E-value=5.5e-14 Score=132.94 Aligned_cols=115 Identities=29% Similarity=0.334 Sum_probs=72.4
Q ss_pred CccccCCh-hccCCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCc-CCCCCchhhcCCcccCeecccccccCCCC
Q 011005 2 YKIGIIPP-EIGNLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNK-LSGKIPPEIASMKYLTQLDLSNNNIQGSI 79 (496)
Q Consensus 2 n~~~~lp~-~~~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~-l~~~~p~~~~~l~~L~~l~l~~N~l~~~~ 79 (496)
|+++.+|. .|.++++|++|+|++|.+++..|..|..+++|++|+|++|. ++...|..+..+++|++|+|++|++++..
T Consensus 42 n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 121 (285)
T 1ozn_A 42 NRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELG 121 (285)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCC
T ss_pred CcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCEEC
Confidence 45555554 46666666666666666665556666666666666666665 55444556666666666666666666555
Q ss_pred CccccCcccccccccccccCCCCCCCCCCCCCccccc
Q 011005 80 PGEITKLSRLDYLNLSSNKLSGPVPFSNNDLSSMHTV 116 (496)
Q Consensus 80 ~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~l~~~ 116 (496)
|..+..+++|+.|++++|.+++..+..|..+++|+.+
T Consensus 122 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 158 (285)
T 1ozn_A 122 PGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHL 158 (285)
T ss_dssp TTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred HhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEE
Confidence 5666666666666666666665555556666666443
No 298
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.50 E-value=2.4e-14 Score=136.87 Aligned_cols=114 Identities=25% Similarity=0.339 Sum_probs=73.8
Q ss_pred CccccCCh--hccCCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCC-CCchhhcCCcccCeecccccccCCC
Q 011005 2 YKIGIIPP--EIGNLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSG-KIPPEIASMKYLTQLDLSNNNIQGS 78 (496)
Q Consensus 2 n~~~~lp~--~~~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~-~~p~~~~~l~~L~~l~l~~N~l~~~ 78 (496)
|+++.++. .+..+++|++|+|++|.+++..|..|..+++|+.|+|++|.+++ .+|..+..+++|+.|+|++|++++.
T Consensus 111 n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~ 190 (306)
T 2z66_A 111 SNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQL 190 (306)
T ss_dssp SEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEE
T ss_pred CcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCc
Confidence 55566554 56666777777777777666666666666667777776666664 3566666666666666666666655
Q ss_pred CCccccCcccccccccccccCCCCCCCCCCCCCcccc
Q 011005 79 IPGEITKLSRLDYLNLSSNKLSGPVPFSNNDLSSMHT 115 (496)
Q Consensus 79 ~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~l~~ 115 (496)
.|..+..+++|+.|++++|.+++..+..+..+++|+.
T Consensus 191 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 227 (306)
T 2z66_A 191 SPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQV 227 (306)
T ss_dssp CTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCE
T ss_pred CHHHhcCCCCCCEEECCCCccCccChhhccCcccCCE
Confidence 5666666666666666666666655555666666644
No 299
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.49 E-value=4.4e-14 Score=142.79 Aligned_cols=124 Identities=24% Similarity=0.262 Sum_probs=104.4
Q ss_pred CccccCCh-hccCCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCCCC
Q 011005 2 YKIGIIPP-EIGNLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGSIP 80 (496)
Q Consensus 2 n~~~~lp~-~~~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~ 80 (496)
|.++.+|. .|.++++|+.|+|++|++++ +| .+..+++|+.|+|++|+|++..|..|.++++|+.|+|++|++++..+
T Consensus 182 ~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 259 (452)
T 3zyi_A 182 KKLEYISEGAFEGLFNLKYLNLGMCNIKD-MP-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIER 259 (452)
T ss_dssp TTCCEECTTTTTTCTTCCEEECTTSCCSS-CC-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECT
T ss_pred CCccccChhhccCCCCCCEEECCCCcccc-cc-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECH
Confidence 45555665 57788888888888888884 45 47888999999999999998888889999999999999999997788
Q ss_pred ccccCcccccccccccccCCCCCCCCCCCCCccccccccCCCCCCCCC
Q 011005 81 GEITKLSRLDYLNLSSNKLSGPVPFSNNDLSSMHTVVSLSPNNGLCGN 128 (496)
Q Consensus 81 ~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~l~~~~~~~~n~~~c~~ 128 (496)
..|..+++|+.|+|++|+|++..+..|..+++|+. +.+.+|++.|+.
T Consensus 260 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~-L~L~~Np~~CdC 306 (452)
T 3zyi_A 260 NAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVE-LHLHHNPWNCDC 306 (452)
T ss_dssp TTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCE-EECCSSCEECST
T ss_pred HHhcCCCCCCEEECCCCcCCccChHHhccccCCCE-EEccCCCcCCCC
Confidence 88999999999999999999888888888998854 578888888864
No 300
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.48 E-value=6.2e-14 Score=131.90 Aligned_cols=114 Identities=19% Similarity=0.188 Sum_probs=60.0
Q ss_pred CccccCCh-hccCCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCCCC
Q 011005 2 YKIGIIPP-EIGNLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGSIP 80 (496)
Q Consensus 2 n~~~~lp~-~~~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~ 80 (496)
|+++.++. .|.++++|++|+|++|++++..+..|..+++|++|+|++|++++..|..|.++++|+.|++++|++++..+
T Consensus 38 n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 117 (276)
T 2z62_A 38 NPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLEN 117 (276)
T ss_dssp CCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTT
T ss_pred CcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECCCCCccccCc
Confidence 44444444 45555555555555555554444455555555555555555554444455555555555555555554434
Q ss_pred ccccCcccccccccccccCCCC-CCCCCCCCCcccc
Q 011005 81 GEITKLSRLDYLNLSSNKLSGP-VPFSNNDLSSMHT 115 (496)
Q Consensus 81 ~~~~~l~~L~~l~l~~n~l~~~-~~~~~~~l~~l~~ 115 (496)
..+..+++|+.|++++|.+++. +|..+..+++|+.
T Consensus 118 ~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~ 153 (276)
T 2z62_A 118 FPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEH 153 (276)
T ss_dssp CCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCE
T ss_pred hhcccCCCCCEEECcCCccceecCchhhccCCCCCE
Confidence 3455555555555555555542 3555555555543
No 301
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.48 E-value=4.3e-14 Score=146.07 Aligned_cols=97 Identities=30% Similarity=0.389 Sum_probs=47.7
Q ss_pred CccccCChhccCCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCCC-C
Q 011005 2 YKIGIIPPEIGNLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGSI-P 80 (496)
Q Consensus 2 n~~~~lp~~~~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~-~ 80 (496)
|+|+.+|. |++|++|+.|+|++|+|+ .+|..|+.+++|+.|+|++|+|++ +| .+..|++|+.|+|++|+|++.. |
T Consensus 451 n~l~~lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p 526 (567)
T 1dce_A 451 KDLTVLCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAI 526 (567)
T ss_dssp SCCSSCCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTT
T ss_pred CCCCCCcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCc
Confidence 44444444 445555555555555554 444445555555555555555552 34 4445555555555555554333 4
Q ss_pred ccccCcccccccccccccCCCC
Q 011005 81 GEITKLSRLDYLNLSSNKLSGP 102 (496)
Q Consensus 81 ~~~~~l~~L~~l~l~~n~l~~~ 102 (496)
..+..|++|+.|+|++|+|++.
T Consensus 527 ~~l~~l~~L~~L~L~~N~l~~~ 548 (567)
T 1dce_A 527 QPLVSCPRLVLLNLQGNSLCQE 548 (567)
T ss_dssp GGGGGCTTCCEEECTTSGGGGS
T ss_pred HHHhcCCCCCEEEecCCcCCCC
Confidence 4455555555555555555443
No 302
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.47 E-value=6.7e-14 Score=124.61 Aligned_cols=111 Identities=19% Similarity=0.325 Sum_probs=84.3
Q ss_pred CCccccCChhccCCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCCCC
Q 011005 1 MYKIGIIPPEIGNLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGSIP 80 (496)
Q Consensus 1 ~n~~~~lp~~~~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~ 80 (496)
+|+++.+| .+..+++|++|+|++|.++ .+ ..+..+++|++|+|++|++++..|..+..+++|+.|+|++|++++..|
T Consensus 53 ~n~i~~l~-~l~~l~~L~~L~l~~n~~~-~~-~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~ 129 (197)
T 4ezg_A 53 NINVTDLT-GIEYAHNIKDLTINNIHAT-NY-NPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSIL 129 (197)
T ss_dssp SSCCSCCT-TGGGCTTCSEEEEESCCCS-CC-GGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECCSSBCBGGGH
T ss_pred CCCccChH-HHhcCCCCCEEEccCCCCC-cc-hhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEecCCccCcHhH
Confidence 36777777 6788888888888888765 33 367788888888888888886677778888888888888888876667
Q ss_pred ccccCccccccccccccc-CCCCCCCCCCCCCccccc
Q 011005 81 GEITKLSRLDYLNLSSNK-LSGPVPFSNNDLSSMHTV 116 (496)
Q Consensus 81 ~~~~~l~~L~~l~l~~n~-l~~~~~~~~~~l~~l~~~ 116 (496)
..+..+++|+.|++++|. ++ .+| .+..+++|+.+
T Consensus 130 ~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L 164 (197)
T 4ezg_A 130 TKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSL 164 (197)
T ss_dssp HHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEE
T ss_pred HHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEE
Confidence 778888888888888887 55 444 56777777554
No 303
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.46 E-value=1.2e-13 Score=129.85 Aligned_cols=109 Identities=26% Similarity=0.283 Sum_probs=61.2
Q ss_pred CccccCCh-hccCCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCC-C
Q 011005 2 YKIGIIPP-EIGNLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGS-I 79 (496)
Q Consensus 2 n~~~~lp~-~~~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~-~ 79 (496)
|+++.++. .|.++++|++|+|++|.+++..++.|.++++|++|++++|++++..+..+..+++|++|+|++|++++. +
T Consensus 62 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l 141 (276)
T 2z62_A 62 CEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKL 141 (276)
T ss_dssp CCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCC
T ss_pred CcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecC
Confidence 45555554 456666666666666666655555566666666666666666544443555556666666666665532 3
Q ss_pred CccccCcccccccccccccCCCCCCCCCCCC
Q 011005 80 PGEITKLSRLDYLNLSSNKLSGPVPFSNNDL 110 (496)
Q Consensus 80 ~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l 110 (496)
|..+..+++|+.|++++|.+++..+..+..+
T Consensus 142 ~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l 172 (276)
T 2z62_A 142 PEYFSNLTNLEHLDLSSNKIQSIYCTDLRVL 172 (276)
T ss_dssp CGGGGGCTTCCEEECCSSCCCEECGGGGHHH
T ss_pred chhhccCCCCCEEECCCCCCCcCCHHHhhhh
Confidence 5555555555555555555554444444333
No 304
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.46 E-value=6.8e-14 Score=136.25 Aligned_cols=98 Identities=24% Similarity=0.211 Sum_probs=79.7
Q ss_pred CccccCChhccCCCCCCEEeccC-CccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCCCC
Q 011005 2 YKIGIIPPEIGNLKNLIKLDVGS-NSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGSIP 80 (496)
Q Consensus 2 n~~~~lp~~~~~l~~L~~L~l~~-n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~ 80 (496)
|+++.||. |..+++|+.|+|++ |.|++..|..|..|++|+.|+|++|+|++..|..|.+|++|+.|+|++|+|++..+
T Consensus 19 n~l~~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 97 (347)
T 2ifg_A 19 GALDSLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALESLSW 97 (347)
T ss_dssp CCCTTTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSCCSCCCS
T ss_pred CCCCccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCCccceeCH
Confidence 36888888 88888888888885 88887777788888888888888888887777788888888888888888885555
Q ss_pred ccccCcccccccccccccCCC
Q 011005 81 GEITKLSRLDYLNLSSNKLSG 101 (496)
Q Consensus 81 ~~~~~l~~L~~l~l~~n~l~~ 101 (496)
..+..++ |+.|+|.+|+|..
T Consensus 98 ~~~~~~~-L~~l~l~~N~~~c 117 (347)
T 2ifg_A 98 KTVQGLS-LQELVLSGNPLHC 117 (347)
T ss_dssp TTTCSCC-CCEEECCSSCCCC
T ss_pred HHcccCC-ceEEEeeCCCccC
Confidence 5565555 8888888888873
No 305
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.46 E-value=6.8e-14 Score=150.78 Aligned_cols=120 Identities=37% Similarity=0.595 Sum_probs=88.5
Q ss_pred Cccc-cCChhccCCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCCCC
Q 011005 2 YKIG-IIPPEIGNLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGSIP 80 (496)
Q Consensus 2 n~~~-~lp~~~~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~ 80 (496)
|++. .+|..++++++|+.|+|++|.+++.+|..|+.+++|+.|+|++|++++.+|..+..+++|+.|+|++|++++.+|
T Consensus 404 n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 483 (768)
T 3rgz_A 404 NGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIP 483 (768)
T ss_dssp SEEEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCC
T ss_pred CccccccCHHHhcCCCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCC
Confidence 4454 466777777777777777777777777777777777777777777777777777777777777777777777777
Q ss_pred ccccCcccccccccccccCCCCCCCCCCCCCccccccccCCC
Q 011005 81 GEITKLSRLDYLNLSSNKLSGPVPFSNNDLSSMHTVVSLSPN 122 (496)
Q Consensus 81 ~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~l~~~~~~~~n 122 (496)
..+.++++|+.|++++|++++.+|.++..+++|+.+ .+++|
T Consensus 484 ~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L-~L~~N 524 (768)
T 3rgz_A 484 SGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAIL-KLSNN 524 (768)
T ss_dssp GGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEE-ECCSS
T ss_pred HHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEE-ECCCC
Confidence 777777777777777777777777777777777544 34443
No 306
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.46 E-value=9.8e-14 Score=145.23 Aligned_cols=120 Identities=18% Similarity=0.196 Sum_probs=106.8
Q ss_pred CccccCCh-hccCCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCCCC
Q 011005 2 YKIGIIPP-EIGNLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGSIP 80 (496)
Q Consensus 2 n~~~~lp~-~~~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~ 80 (496)
|.++.+|. .+.++++|++|+|++|.|++..|..|..+++|++|+|++|.|++..|..|.++++|++|+|++|.+++..+
T Consensus 61 ~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~ 140 (597)
T 3oja_B 61 STMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPR 140 (597)
T ss_dssp CEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCT
T ss_pred CCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCH
Confidence 66788888 47889999999999999998888899999999999999999998888889999999999999999996556
Q ss_pred ccccCcccccccccccccCCCCCCCCCCCCCccccccccCCC
Q 011005 81 GEITKLSRLDYLNLSSNKLSGPVPFSNNDLSSMHTVVSLSPN 122 (496)
Q Consensus 81 ~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~l~~~~~~~~n 122 (496)
..|.++++|+.|++++|.+++..|..|..+++|+.|. ++.|
T Consensus 141 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~-L~~N 181 (597)
T 3oja_B 141 GIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQ-LSSN 181 (597)
T ss_dssp TTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEE-CTTS
T ss_pred HHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEE-CcCC
Confidence 6679999999999999999999999999999997654 4444
No 307
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.45 E-value=1.3e-13 Score=136.46 Aligned_cols=121 Identities=17% Similarity=0.196 Sum_probs=106.3
Q ss_pred CCccccCChh-ccCCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCCC
Q 011005 1 MYKIGIIPPE-IGNLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGSI 79 (496)
Q Consensus 1 ~n~~~~lp~~-~~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~ 79 (496)
.|.++.+|.. +..+++|++|+|++|.+++..+..|..+++|++|+|++|++++..|..|..+++|++|+|++|+++...
T Consensus 54 ~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~ 133 (390)
T 3o6n_A 54 NSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLP 133 (390)
T ss_dssp SCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCC
T ss_pred CCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCC
Confidence 3678889985 788999999999999999877789999999999999999999877888999999999999999999544
Q ss_pred CccccCcccccccccccccCCCCCCCCCCCCCccccccccCCC
Q 011005 80 PGEITKLSRLDYLNLSSNKLSGPVPFSNNDLSSMHTVVSLSPN 122 (496)
Q Consensus 80 ~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~l~~~~~~~~n 122 (496)
+..+..+++|+.|++++|.+++..|..+..+++|+.+. ++.|
T Consensus 134 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~-l~~n 175 (390)
T 3o6n_A 134 RGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQ-LSSN 175 (390)
T ss_dssp TTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEE-CCSS
T ss_pred HHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEE-CCCC
Confidence 45579999999999999999999899999999997654 4444
No 308
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.45 E-value=1.3e-13 Score=144.64 Aligned_cols=116 Identities=22% Similarity=0.250 Sum_probs=88.6
Q ss_pred CCccccCCh-hccCCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCCC
Q 011005 1 MYKIGIIPP-EIGNLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGSI 79 (496)
Q Consensus 1 ~n~~~~lp~-~~~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~ 79 (496)
+|+++.++. .|.++++|++|+|++|++++..|+.|.++++|++|+|++|++++..|..|.++++|++|+|++|++++..
T Consensus 41 ~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~ 120 (606)
T 3vq2_A 41 FNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLE 120 (606)
T ss_dssp TSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEECTTSCCCCSS
T ss_pred CCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEccCCcccccc
Confidence 366666666 6777888888888888887777777888888888888888888666777888888888888888887656
Q ss_pred CccccCcccccccccccccCCC-CCCCCCCCCCccccc
Q 011005 80 PGEITKLSRLDYLNLSSNKLSG-PVPFSNNDLSSMHTV 116 (496)
Q Consensus 80 ~~~~~~l~~L~~l~l~~n~l~~-~~~~~~~~l~~l~~~ 116 (496)
+..++++++|+.|++++|.+++ .+|..+.++++|+.+
T Consensus 121 ~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L 158 (606)
T 3vq2_A 121 SFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHV 158 (606)
T ss_dssp SSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEE
T ss_pred ccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEE
Confidence 5677788888888888888875 457777777777654
No 309
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.45 E-value=1.6e-14 Score=154.01 Aligned_cols=116 Identities=22% Similarity=0.367 Sum_probs=74.3
Q ss_pred ccccCChhccCCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCCCCcc
Q 011005 3 KIGIIPPEIGNLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGSIPGE 82 (496)
Q Consensus 3 ~~~~lp~~~~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~ 82 (496)
++...|..+..+++|+.|+|++|.|. .+|..+..+++|++|+|++|+|+ .+|..|.+|++|+.|+|++|+|+ .+|..
T Consensus 212 ~~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~ 288 (727)
T 4b8c_D 212 RMVMPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAE 288 (727)
T ss_dssp ----------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSS
T ss_pred ceecChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChh
Confidence 34444556777777777777777776 55656667777777777777777 67777777777777777777777 66777
Q ss_pred ccCcccccccccccccCCCCCCCCCCCCCccccccccCCCC
Q 011005 83 ITKLSRLDYLNLSSNKLSGPVPFSNNDLSSMHTVVSLSPNN 123 (496)
Q Consensus 83 ~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~l~~~~~~~~n~ 123 (496)
|.+|++|+.|+|++|.|+ .+|..|..+++|+.| .+++|.
T Consensus 289 ~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L-~L~~N~ 327 (727)
T 4b8c_D 289 LGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFL-GVEGNP 327 (727)
T ss_dssp GGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCE-ECTTSC
T ss_pred hcCCCCCCEEECCCCCCC-ccChhhhcCCCccEE-eCCCCc
Confidence 777777777777777776 556667777777543 444443
No 310
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.44 E-value=1.3e-13 Score=131.75 Aligned_cols=115 Identities=26% Similarity=0.302 Sum_probs=82.4
Q ss_pred CccccCChhccCCCCCCEEeccCCccCCCCC-ccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCC-CC
Q 011005 2 YKIGIIPPEIGNLKNLIKLDVGSNSLIGPIP-SALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQG-SI 79 (496)
Q Consensus 2 n~~~~lp~~~~~l~~L~~L~l~~n~i~~~~p-~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~-~~ 79 (496)
|++..+|..+..+++|++|+|++|++++..+ ..+..+++|++|+|++|.+++..|..+..+++|+.|+|++|.+++ .+
T Consensus 88 n~i~~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 167 (306)
T 2z66_A 88 NGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFL 167 (306)
T ss_dssp CSEEEEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEE
T ss_pred CccccChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccc
Confidence 5666677777777777777777777775443 467777777777777777776666677777777777777777764 45
Q ss_pred CccccCcccccccccccccCCCCCCCCCCCCCccccc
Q 011005 80 PGEITKLSRLDYLNLSSNKLSGPVPFSNNDLSSMHTV 116 (496)
Q Consensus 80 ~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~l~~~ 116 (496)
|..+..+++|+.|++++|.+++..|..+..+++|+.+
T Consensus 168 ~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L 204 (306)
T 2z66_A 168 PDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVL 204 (306)
T ss_dssp CSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred hhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEE
Confidence 6677777777777777777777667777777777554
No 311
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.44 E-value=1.3e-13 Score=122.77 Aligned_cols=102 Identities=25% Similarity=0.340 Sum_probs=59.2
Q ss_pred hccCCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccc-cCCCCCccccCccc
Q 011005 10 EIGNLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNN-IQGSIPGEITKLSR 88 (496)
Q Consensus 10 ~~~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~-l~~~~~~~~~~l~~ 88 (496)
.+..+++|++|+|++|.+++..|..|..+++|++|+|++|++++..|..+..+++|+.|+|++|. ++ .+| .+..+++
T Consensus 83 ~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~ 160 (197)
T 4ezg_A 83 PISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPE 160 (197)
T ss_dssp GGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSS
T ss_pred hhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCC
Confidence 45556666666666666655455556666666666666666665555556666666666666665 44 333 4556666
Q ss_pred ccccccccccCCCCCCCCCCCCCcccc
Q 011005 89 LDYLNLSSNKLSGPVPFSNNDLSSMHT 115 (496)
Q Consensus 89 L~~l~l~~n~l~~~~~~~~~~l~~l~~ 115 (496)
|+.|++++|.+++.. .+..+++|+.
T Consensus 161 L~~L~l~~n~i~~~~--~l~~l~~L~~ 185 (197)
T 4ezg_A 161 LKSLNIQFDGVHDYR--GIEDFPKLNQ 185 (197)
T ss_dssp CCEEECTTBCCCCCT--TGGGCSSCCE
T ss_pred CCEEECCCCCCcChH--HhccCCCCCE
Confidence 666666666665422 4555555543
No 312
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.44 E-value=1.1e-13 Score=140.95 Aligned_cols=100 Identities=26% Similarity=0.324 Sum_probs=47.7
Q ss_pred CCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCCCCccccCcccccccccc
Q 011005 16 NLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGSIPGEITKLSRLDYLNLS 95 (496)
Q Consensus 16 ~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~l~~L~~l~l~ 95 (496)
+|+.|+|++|+|++..|..|.++++|++|+|++|.|++..|..|.++++|++|+|++|++++..+..|.++++|+.|+++
T Consensus 33 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 112 (477)
T 2id5_A 33 ETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDIS 112 (477)
T ss_dssp TCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEECT
T ss_pred CCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEECC
Confidence 44455555555544444444445555555555555444444444445555555555554443333334444455555555
Q ss_pred cccCCCCCCCCCCCCCcccc
Q 011005 96 SNKLSGPVPFSNNDLSSMHT 115 (496)
Q Consensus 96 ~n~l~~~~~~~~~~l~~l~~ 115 (496)
+|.+++..|..|..+++|+.
T Consensus 113 ~n~i~~~~~~~~~~l~~L~~ 132 (477)
T 2id5_A 113 ENKIVILLDYMFQDLYNLKS 132 (477)
T ss_dssp TSCCCEECTTTTTTCTTCCE
T ss_pred CCccccCChhHccccccCCE
Confidence 55444444444444444433
No 313
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.44 E-value=4.7e-14 Score=123.17 Aligned_cols=82 Identities=21% Similarity=0.270 Sum_probs=37.9
Q ss_pred CCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCCCCc--cccCcccccccc
Q 011005 16 NLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGSIPG--EITKLSRLDYLN 93 (496)
Q Consensus 16 ~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~--~~~~l~~L~~l~ 93 (496)
+|+.|+|++|.|++. +.|..+++|++|+|++|+|++..|..+..+++|+.|+|++|+++ .+|. .+..+++|+.|+
T Consensus 43 ~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~ 119 (176)
T 1a9n_A 43 QFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLV-ELGDLDPLASLKSLTYLC 119 (176)
T ss_dssp CCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEECCSCCCC-CGGGGGGGGGCTTCCEEE
T ss_pred CCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCEEECCCCcCC-cchhhHhhhcCCCCCEEE
Confidence 455555555554432 34444455555555555554322222344455555555555554 3333 444444555555
Q ss_pred cccccCC
Q 011005 94 LSSNKLS 100 (496)
Q Consensus 94 l~~n~l~ 100 (496)
+++|+++
T Consensus 120 l~~N~i~ 126 (176)
T 1a9n_A 120 ILRNPVT 126 (176)
T ss_dssp CCSSGGG
T ss_pred ecCCCCC
Confidence 5555544
No 314
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.43 E-value=4.5e-14 Score=148.78 Aligned_cols=119 Identities=15% Similarity=0.314 Sum_probs=100.7
Q ss_pred CccccCChhccCCCCCCEEeccCCccCCC-----------------CCccCC--CCCCCCEEeccCCcCCCCCchhhcCC
Q 011005 2 YKIGIIPPEIGNLKNLIKLDVGSNSLIGP-----------------IPSALG--SLTNLSNLDLSSNKLSGKIPPEIASM 62 (496)
Q Consensus 2 n~~~~lp~~~~~l~~L~~L~l~~n~i~~~-----------------~p~~~~--~l~~L~~l~l~~n~l~~~~p~~~~~l 62 (496)
|+++.+|..|+++++|++|+|++|.+++. +|+.++ ++++|++|+|++|++.+.+|+.+.++
T Consensus 193 n~l~~ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l 272 (636)
T 4eco_A 193 NNITFVSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKAL 272 (636)
T ss_dssp CEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTC
T ss_pred CCCccCCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcC
Confidence 57777899999999999999999999874 888888 99999999999999998999999999
Q ss_pred cccCeecccccc-cCC-CCCccccCc------ccccccccccccCCCCCCC--CCCCCCccccccccCCC
Q 011005 63 KYLTQLDLSNNN-IQG-SIPGEITKL------SRLDYLNLSSNKLSGPVPF--SNNDLSSMHTVVSLSPN 122 (496)
Q Consensus 63 ~~L~~l~l~~N~-l~~-~~~~~~~~l------~~L~~l~l~~n~l~~~~~~--~~~~l~~l~~~~~~~~n 122 (496)
++|++|+|++|+ +++ .+|..+..+ ++|+.|++++|.++ .+|. .+.++++|+.+ .++.|
T Consensus 273 ~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L-~L~~N 340 (636)
T 4eco_A 273 PEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGML-ECLYN 340 (636)
T ss_dssp SSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEE-ECCSC
T ss_pred CCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEE-eCcCC
Confidence 999999999998 887 788877776 88999999999988 7777 88888888665 34433
No 315
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.42 E-value=1.9e-13 Score=145.69 Aligned_cols=121 Identities=27% Similarity=0.346 Sum_probs=107.0
Q ss_pred CCccccCChhccCCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCCCC
Q 011005 1 MYKIGIIPPEIGNLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGSIP 80 (496)
Q Consensus 1 ~n~~~~lp~~~~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~ 80 (496)
.|++..+|..+.+|++|++|+|++|.|+ .+|..|+.|++|++|+|++|+|+ .+|..|.+|++|+.|+|++|.|+ .+|
T Consensus 233 ~n~l~~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~lp 309 (727)
T 4b8c_D 233 NLQIFNISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT-TLP 309 (727)
T ss_dssp TSCCSCCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCC-CCC
T ss_pred CCCCCCCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCC-ccC
Confidence 4889999999999999999999999999 88999999999999999999999 78999999999999999999998 788
Q ss_pred ccccCcccccccccccccCCCCCCCCCCCCCccccccccCCCCC
Q 011005 81 GEITKLSRLDYLNLSSNKLSGPVPFSNNDLSSMHTVVSLSPNNG 124 (496)
Q Consensus 81 ~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~l~~~~~~~~n~~ 124 (496)
..|..|++|+.|+|++|+|++.+|..+..+..+...+.+.+|..
T Consensus 310 ~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l 353 (727)
T 4b8c_D 310 WEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRP 353 (727)
T ss_dssp SSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred hhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcc
Confidence 88999999999999999999998888766544333344555543
No 316
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.42 E-value=1.9e-13 Score=142.32 Aligned_cols=125 Identities=25% Similarity=0.332 Sum_probs=89.0
Q ss_pred CccccCCh--hccCCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCC-CCCchhhcCCcccCeecccccccCCC
Q 011005 2 YKIGIIPP--EIGNLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLS-GKIPPEIASMKYLTQLDLSNNNIQGS 78 (496)
Q Consensus 2 n~~~~lp~--~~~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~-~~~p~~~~~l~~L~~l~l~~N~l~~~ 78 (496)
|++..++. .+.++++|++|+|++|.+.+..|..|..+++|+.|+|++|.++ +.+|..+..+++|+.|+|++|++++.
T Consensus 406 n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~ 485 (570)
T 2z63_A 406 SNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQL 485 (570)
T ss_dssp SEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEE
T ss_pred CccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccC
Confidence 44554433 5667777777777777777667777777777777777777776 45677777777777777777777766
Q ss_pred CCccccCcccccccccccccCCCCCCCCCCCCCccccccccCCCCCCCC
Q 011005 79 IPGEITKLSRLDYLNLSSNKLSGPVPFSNNDLSSMHTVVSLSPNNGLCG 127 (496)
Q Consensus 79 ~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~l~~~~~~~~n~~~c~ 127 (496)
.|..+..+++|+.|++++|++++..|..|..+++|+. +.+.+|+..|.
T Consensus 486 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~-L~l~~N~~~~~ 533 (570)
T 2z63_A 486 SPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQK-IWLHTNPWDCS 533 (570)
T ss_dssp CTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCE-EECCSSCBCCC
T ss_pred ChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcE-EEecCCcccCC
Confidence 6777777777777888777777777777777777744 45666766654
No 317
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.42 E-value=2e-13 Score=133.29 Aligned_cols=113 Identities=25% Similarity=0.254 Sum_probs=74.4
Q ss_pred CccccCChhccCCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCCCCc
Q 011005 2 YKIGIIPPEIGNLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGSIPG 81 (496)
Q Consensus 2 n~~~~lp~~~~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~ 81 (496)
|.++.+|..+. ++|++|+|++|+|++..++.|.++++|+.|+|++|+|++..|..|.++++|++|+|++|++++..+.
T Consensus 41 ~~l~~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~ 118 (353)
T 2z80_A 41 GSLNSIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSS 118 (353)
T ss_dssp TTCSSCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHH
T ss_pred CCccccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHh
Confidence 55666776554 3677777777777755555677777777777777777765566677777777777777777743334
Q ss_pred cccCcccccccccccccCCCCCC-CCCCCCCccccc
Q 011005 82 EITKLSRLDYLNLSSNKLSGPVP-FSNNDLSSMHTV 116 (496)
Q Consensus 82 ~~~~l~~L~~l~l~~n~l~~~~~-~~~~~l~~l~~~ 116 (496)
.+..+++|+.|++++|++++..+ ..+..+++|+.+
T Consensus 119 ~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L 154 (353)
T 2z80_A 119 WFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQIL 154 (353)
T ss_dssp HHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEE
T ss_pred HhCCCccCCEEECCCCCCcccCchhhhccCCCCcEE
Confidence 46677777777777777774444 456666666544
No 318
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.42 E-value=1.2e-13 Score=127.03 Aligned_cols=111 Identities=18% Similarity=0.286 Sum_probs=74.2
Q ss_pred CccccCCh-hccCCCCCCEEeccCCc-cCCCCCccCCCCCCCCEEeccC-CcCCCCCchhhcCCcccCeecccccccCCC
Q 011005 2 YKIGIIPP-EIGNLKNLIKLDVGSNS-LIGPIPSALGSLTNLSNLDLSS-NKLSGKIPPEIASMKYLTQLDLSNNNIQGS 78 (496)
Q Consensus 2 n~~~~lp~-~~~~l~~L~~L~l~~n~-i~~~~p~~~~~l~~L~~l~l~~-n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~ 78 (496)
|+++.+|. .|.++++|+.|+|++|+ +++..+..|.++++|++|+|++ |+|++..+..|..+++|+.|+|++|++++
T Consensus 41 n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~- 119 (239)
T 2xwt_C 41 THLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKM- 119 (239)
T ss_dssp CCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEEEEEECCCS-
T ss_pred CcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCcc-
Confidence 56666666 56677777777777775 6655555667777777777776 77775444566677777777777777763
Q ss_pred CCccccCccccc---ccccccc-cCCCCCCCCCCCCCccc
Q 011005 79 IPGEITKLSRLD---YLNLSSN-KLSGPVPFSNNDLSSMH 114 (496)
Q Consensus 79 ~~~~~~~l~~L~---~l~l~~n-~l~~~~~~~~~~l~~l~ 114 (496)
+|. +..+++|+ .|++++| .+++..+..|..+++|+
T Consensus 120 lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~ 158 (239)
T 2xwt_C 120 FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNET 158 (239)
T ss_dssp CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSE
T ss_pred ccc-cccccccccccEEECCCCcchhhcCcccccchhcce
Confidence 554 66666666 7777777 67666666677777665
No 319
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.40 E-value=3.2e-13 Score=131.84 Aligned_cols=117 Identities=22% Similarity=0.195 Sum_probs=102.9
Q ss_pred CCccccCCh-hccCCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCCC
Q 011005 1 MYKIGIIPP-EIGNLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGSI 79 (496)
Q Consensus 1 ~n~~~~lp~-~~~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~ 79 (496)
+|+++.+|. .|.++++|+.|+|++|++++..|+.|.++++|++|+|++|+|++..+..+..+++|++|+|++|++++..
T Consensus 61 ~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~ 140 (353)
T 2z80_A 61 NNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLG 140 (353)
T ss_dssp TSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSC
T ss_pred CCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccC
Confidence 478888888 7999999999999999999888889999999999999999999655455999999999999999999443
Q ss_pred C-ccccCcccccccccccc-cCCCCCCCCCCCCCcccccc
Q 011005 80 P-GEITKLSRLDYLNLSSN-KLSGPVPFSNNDLSSMHTVV 117 (496)
Q Consensus 80 ~-~~~~~l~~L~~l~l~~n-~l~~~~~~~~~~l~~l~~~~ 117 (496)
+ ..+..+++|+.|++++| .+++..+..|.++++|+.+.
T Consensus 141 ~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~ 180 (353)
T 2z80_A 141 ETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELE 180 (353)
T ss_dssp SSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEE
T ss_pred chhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEE
Confidence 3 47999999999999999 57777788999999997653
No 320
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.40 E-value=5.3e-13 Score=142.04 Aligned_cols=116 Identities=28% Similarity=0.285 Sum_probs=91.2
Q ss_pred CCccccCCh-hccCCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCCC
Q 011005 1 MYKIGIIPP-EIGNLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGSI 79 (496)
Q Consensus 1 ~n~~~~lp~-~~~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~ 79 (496)
+|+++.+|. .|.++++|++|+|++|.+++..|+.|.++++|++|+|++|+|++..+..|.++++|++|+|++|++++..
T Consensus 34 ~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~ 113 (680)
T 1ziw_A 34 HNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIK 113 (680)
T ss_dssp SSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCC
T ss_pred CCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEECCCCccCccC
Confidence 366777776 5788888888888888888777777888888888888888888544446888888888888888887666
Q ss_pred CccccCcccccccccccccCCCCCCCCCCCCCccccc
Q 011005 80 PGEITKLSRLDYLNLSSNKLSGPVPFSNNDLSSMHTV 116 (496)
Q Consensus 80 ~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~l~~~ 116 (496)
|..|.++++|+.|++++|.+++..|..+.++++|+.+
T Consensus 114 ~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L 150 (680)
T 1ziw_A 114 NNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQEL 150 (680)
T ss_dssp SCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEE
T ss_pred hhHccccCCCCEEECCCCcccccCchhhcccccCCEE
Confidence 6778888888888888888888878778888887655
No 321
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.40 E-value=1.9e-13 Score=148.93 Aligned_cols=90 Identities=26% Similarity=0.366 Sum_probs=55.0
Q ss_pred ccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCCCCccccCcccccccccccccCCCCCCCCCCCCCc
Q 011005 33 SALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGSIPGEITKLSRLDYLNLSSNKLSGPVPFSNNDLSS 112 (496)
Q Consensus 33 ~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~ 112 (496)
+.|..+++|+.|+|++|+|++..|..|..+++|+.|+|++|++++..+..+. ++|+.|++++|+|++..|..|.++.
T Consensus 474 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~~~~~L~- 550 (844)
T 3j0a_A 474 DVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPNPDVFVSLS- 550 (844)
T ss_dssp SCSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCCSCCCSSCC-
T ss_pred hhhcCcccccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhh--ccccEEECCCCcCCCCChhHhCCcC-
Confidence 3455556666666666666655555566666666666666666644444443 5666666666666666666655433
Q ss_pred cccccccCCCCCCCCC
Q 011005 113 MHTVVSLSPNNGLCGN 128 (496)
Q Consensus 113 l~~~~~~~~n~~~c~~ 128 (496)
.+.+.+|++.|+.
T Consensus 551 ---~l~l~~Np~~C~c 563 (844)
T 3j0a_A 551 ---VLDITHNKFICEC 563 (844)
T ss_dssp ---EEEEEEECCCCSS
T ss_pred ---EEEecCCCccccc
Confidence 2467788888853
No 322
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.40 E-value=7.6e-14 Score=150.34 Aligned_cols=119 Identities=18% Similarity=0.280 Sum_probs=101.8
Q ss_pred CccccCChhccCCCCCCEEeccCCccCC-----------------CCCccCC--CCCCCCEEeccCCcCCCCCchhhcCC
Q 011005 2 YKIGIIPPEIGNLKNLIKLDVGSNSLIG-----------------PIPSALG--SLTNLSNLDLSSNKLSGKIPPEIASM 62 (496)
Q Consensus 2 n~~~~lp~~~~~l~~L~~L~l~~n~i~~-----------------~~p~~~~--~l~~L~~l~l~~n~l~~~~p~~~~~l 62 (496)
|+++.||..|++|++|+.|+|++|+|++ .+|+.++ ++++|+.|+|++|++.+.+|..|.+|
T Consensus 435 N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L 514 (876)
T 4ecn_A 435 NRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDL 514 (876)
T ss_dssp CEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGC
T ss_pred CcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCC
Confidence 6777799999999999999999999997 2888887 99999999999999999999999999
Q ss_pred cccCeecccccc-cCC-CCCccccCcc-------cccccccccccCCCCCCC--CCCCCCccccccccCCC
Q 011005 63 KYLTQLDLSNNN-IQG-SIPGEITKLS-------RLDYLNLSSNKLSGPVPF--SNNDLSSMHTVVSLSPN 122 (496)
Q Consensus 63 ~~L~~l~l~~N~-l~~-~~~~~~~~l~-------~L~~l~l~~n~l~~~~~~--~~~~l~~l~~~~~~~~n 122 (496)
++|+.|+|++|+ +++ .+|..+..++ +|+.|++++|.++ .+|. .+.++++|+.| .++.|
T Consensus 515 ~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L-~Ls~N 583 (876)
T 4ecn_A 515 PELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLL-DCVHN 583 (876)
T ss_dssp SSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEE-ECTTS
T ss_pred CCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEE-ECCCC
Confidence 999999999998 887 6787776665 8999999999999 7787 88888888665 34444
No 323
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.39 E-value=1.8e-13 Score=115.92 Aligned_cols=107 Identities=20% Similarity=0.251 Sum_probs=94.1
Q ss_pred CCCCCCEEeccCCccC-CCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCCCCccccCcccccc
Q 011005 13 NLKNLIKLDVGSNSLI-GPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGSIPGEITKLSRLDY 91 (496)
Q Consensus 13 ~l~~L~~L~l~~n~i~-~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~l~~L~~ 91 (496)
..++|+.|++++|.++ +.+|..+..+++|+.|+|++|+|++. ..+..+++|+.|+|++|++++.+|..+..+++|+.
T Consensus 15 ~~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~ 92 (149)
T 2je0_A 15 TPSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTH 92 (149)
T ss_dssp CGGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCE
T ss_pred CCccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCE
Confidence 4578999999999998 78888999999999999999999965 78999999999999999999778888888999999
Q ss_pred cccccccCCCC-CCCCCCCCCccccccccCCC
Q 011005 92 LNLSSNKLSGP-VPFSNNDLSSMHTVVSLSPN 122 (496)
Q Consensus 92 l~l~~n~l~~~-~~~~~~~l~~l~~~~~~~~n 122 (496)
|++++|.+++. .+..+..+++|+.+ .+++|
T Consensus 93 L~ls~N~i~~~~~~~~~~~l~~L~~L-~l~~N 123 (149)
T 2je0_A 93 LNLSGNKIKDLSTIEPLKKLENLKSL-DLFNC 123 (149)
T ss_dssp EECTTSCCCSHHHHGGGGGCTTCCEE-ECTTC
T ss_pred EECCCCcCCChHHHHHHhhCCCCCEE-eCcCC
Confidence 99999999974 34788889998665 44444
No 324
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.39 E-value=5.5e-13 Score=139.96 Aligned_cols=119 Identities=23% Similarity=0.286 Sum_probs=108.0
Q ss_pred CCccccCChhccCCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCCCC
Q 011005 1 MYKIGIIPPEIGNLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGSIP 80 (496)
Q Consensus 1 ~n~~~~lp~~~~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~ 80 (496)
++.++.+|..+. ++|++|+|++|++++..+..|.++++|++|+|++|++++..|..|.++++|++|+|++|++++..|
T Consensus 20 ~~~l~~ip~~~~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p 97 (606)
T 3vq2_A 20 DQKLSKVPDDIP--SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSP 97 (606)
T ss_dssp TSCCSSCCTTSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCT
T ss_pred CCCcccCCCCCC--CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccCh
Confidence 357888998765 789999999999998888899999999999999999998788899999999999999999998779
Q ss_pred ccccCcccccccccccccCCCCCCCCCCCCCccccccccCCC
Q 011005 81 GEITKLSRLDYLNLSSNKLSGPVPFSNNDLSSMHTVVSLSPN 122 (496)
Q Consensus 81 ~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~l~~~~~~~~n 122 (496)
..|.++++|+.|++++|.+++..+..+.++++|+.+. ++.|
T Consensus 98 ~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~-L~~n 138 (606)
T 3vq2_A 98 GSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLN-VAHN 138 (606)
T ss_dssp TSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEE-CCSS
T ss_pred hhcCCcccCCEEEccCCccccccccccCCCCCCCEEe-CCCC
Confidence 9999999999999999999988889999999997764 4444
No 325
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.39 E-value=3.3e-13 Score=139.87 Aligned_cols=113 Identities=26% Similarity=0.269 Sum_probs=67.5
Q ss_pred CccccCChhccCCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCCCCc
Q 011005 2 YKIGIIPPEIGNLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGSIPG 81 (496)
Q Consensus 2 n~~~~lp~~~~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~ 81 (496)
|.++.+|..+. ++|++|+|++|++++..|..|.++++|++|+|++|+|++..|..|..+++|++|+|++|++++..|.
T Consensus 15 ~~l~~ip~~~~--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~ 92 (549)
T 2z81_A 15 RSFTSIPSGLT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSS 92 (549)
T ss_dssp SCCSSCCSCCC--TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHH
T ss_pred CccccccccCC--CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHH
Confidence 45556665443 4566666666666655555666666666666666666655555666666666666666666654444
Q ss_pred cccCcccccccccccccCCC-CCCCCCCCCCccccc
Q 011005 82 EITKLSRLDYLNLSSNKLSG-PVPFSNNDLSSMHTV 116 (496)
Q Consensus 82 ~~~~l~~L~~l~l~~n~l~~-~~~~~~~~l~~l~~~ 116 (496)
.++++++|+.|++++|.+++ ..|..+.++++|+.+
T Consensus 93 ~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L 128 (549)
T 2z81_A 93 WFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTL 128 (549)
T ss_dssp HHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEE
T ss_pred HhccCCCCcEEECCCCcccccchhhhhhccCCccEE
Confidence 56666666666666666654 234555556655443
No 326
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.39 E-value=7e-13 Score=133.96 Aligned_cols=113 Identities=20% Similarity=0.222 Sum_probs=80.0
Q ss_pred CccccCChhccCCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCCCCc
Q 011005 2 YKIGIIPPEIGNLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGSIPG 81 (496)
Q Consensus 2 n~~~~lp~~~~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~ 81 (496)
+.++.+|..+. ++|+.|+|++|+|++..|+.|.++++|+.|+|++|+|++..|..|.++++|+.|+|++|++++..+.
T Consensus 64 ~~l~~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 141 (452)
T 3zyi_A 64 RGLSEVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSG 141 (452)
T ss_dssp SCCSSCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTT
T ss_pred CCcCccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChh
Confidence 34566666544 4677777777777766677777777777777777777766666777777777777777777755555
Q ss_pred cccCcccccccccccccCCCCCCCCCCCCCccccc
Q 011005 82 EITKLSRLDYLNLSSNKLSGPVPFSNNDLSSMHTV 116 (496)
Q Consensus 82 ~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~l~~~ 116 (496)
.|..+++|+.|++++|.|+...+..|..+++|+.|
T Consensus 142 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 176 (452)
T 3zyi_A 142 AFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRL 176 (452)
T ss_dssp TSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEE
T ss_pred hhcccCCCCEEECCCCCcceeCHhHHhcCCcccEE
Confidence 67777777777777777776666667777766554
No 327
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.39 E-value=2.3e-13 Score=140.17 Aligned_cols=111 Identities=22% Similarity=0.225 Sum_probs=91.2
Q ss_pred CCccccCChhccCCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCCCC
Q 011005 1 MYKIGIIPPEIGNLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGSIP 80 (496)
Q Consensus 1 ~n~~~~lp~~~~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~ 80 (496)
+|+++.+|..+. ++|++|+|++|.|++..|+.|..+++|++|+|++|+|++..|..|..+++|++|+|++|+++ .+|
T Consensus 9 ~n~l~~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp 85 (520)
T 2z7x_B 9 KNGLIHVPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLV-KIS 85 (520)
T ss_dssp TSCCSSCCCSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCC-EEE
T ss_pred CCCccccccccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCcee-ecC
Confidence 477888888766 78888888888888777778888888888888888888777888888888888888888888 566
Q ss_pred ccccCcccccccccccccCCC-CCCCCCCCCCccccc
Q 011005 81 GEITKLSRLDYLNLSSNKLSG-PVPFSNNDLSSMHTV 116 (496)
Q Consensus 81 ~~~~~l~~L~~l~l~~n~l~~-~~~~~~~~l~~l~~~ 116 (496)
.. .+++|+.|++++|.+++ ..|..|..+++|+.+
T Consensus 86 ~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L 120 (520)
T 2z7x_B 86 CH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFL 120 (520)
T ss_dssp CC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEE
T ss_pred cc--ccCCccEEeccCCccccccchhhhccCCcceEE
Confidence 55 78888888888888887 467888888888665
No 328
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.39 E-value=5.5e-13 Score=139.97 Aligned_cols=115 Identities=19% Similarity=0.109 Sum_probs=71.7
Q ss_pred CccccCCh-hccCCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCCCC
Q 011005 2 YKIGIIPP-EIGNLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGSIP 80 (496)
Q Consensus 2 n~~~~lp~-~~~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~ 80 (496)
|+|+.+++ .|+++++|++|+|++|++++..|+.|.++++|++|+|++|++++..|..|.++++|++|+|++|++++..+
T Consensus 43 n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~l~~ 122 (606)
T 3t6q_A 43 NVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFFIQTGISSIDF 122 (606)
T ss_dssp CCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEECTTSCCSCGGG
T ss_pred CccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEeeccccCcccCCc
Confidence 55555533 56666666666666666666666666666666666666666665556666666666666666666664445
Q ss_pred ccccCcccccccccccccCCCCCCCCCCCCCccccc
Q 011005 81 GEITKLSRLDYLNLSSNKLSGPVPFSNNDLSSMHTV 116 (496)
Q Consensus 81 ~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~l~~~ 116 (496)
..+.++++|+.|++++|.+++.....+..+++|+.+
T Consensus 123 ~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 158 (606)
T 3t6q_A 123 IPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVL 158 (606)
T ss_dssp SCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEE
T ss_pred chhccCCcccEEECCCCcccccCcccccCCcccCEE
Confidence 566666666666666666665433333335555443
No 329
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.39 E-value=9.6e-13 Score=127.13 Aligned_cols=106 Identities=25% Similarity=0.361 Sum_probs=66.9
Q ss_pred CChhccCCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCCCCccccCc
Q 011005 7 IPPEIGNLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGSIPGEITKL 86 (496)
Q Consensus 7 lp~~~~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~l 86 (496)
.+..+.++++|+.|++++|.++ .+|..+. ++|+.|+|++|++++..|..+..+++|+.|+|++|++++..+..+..+
T Consensus 163 ~~~~~~~l~~L~~L~l~~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l 239 (330)
T 1xku_A 163 ENGAFQGMKKLSYIRIADTNIT-TIPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANT 239 (330)
T ss_dssp CTTGGGGCTTCCEEECCSSCCC-SCCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGS
T ss_pred ChhhccCCCCcCEEECCCCccc-cCCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCC
Confidence 4456677777777777777766 3444333 566666666666665556666666666666666666665555566666
Q ss_pred ccccccccccccCCCCCCCCCCCCCccccc
Q 011005 87 SRLDYLNLSSNKLSGPVPFSNNDLSSMHTV 116 (496)
Q Consensus 87 ~~L~~l~l~~n~l~~~~~~~~~~l~~l~~~ 116 (496)
++|+.|++++|.++ .+|..+..+++|+.+
T Consensus 240 ~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L 268 (330)
T 1xku_A 240 PHLRELHLNNNKLV-KVPGGLADHKYIQVV 268 (330)
T ss_dssp TTCCEEECCSSCCS-SCCTTTTTCSSCCEE
T ss_pred CCCCEEECCCCcCc-cCChhhccCCCcCEE
Confidence 66666666666666 555566666666443
No 330
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.38 E-value=1.2e-13 Score=145.63 Aligned_cols=113 Identities=20% Similarity=0.413 Sum_probs=103.2
Q ss_pred CChhcc--CCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCc-CCC-CCchhhcCC------cccCeecccccccC
Q 011005 7 IPPEIG--NLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNK-LSG-KIPPEIASM------KYLTQLDLSNNNIQ 76 (496)
Q Consensus 7 lp~~~~--~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~-l~~-~~p~~~~~l------~~L~~l~l~~N~l~ 76 (496)
+|+.++ ++++|++|+|++|++.+.+|+.|+++++|++|+|++|+ +++ .+|..+..+ ++|+.|+|++|+++
T Consensus 239 ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~ 318 (636)
T 4eco_A 239 KTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK 318 (636)
T ss_dssp TTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS
T ss_pred CchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC
Confidence 999999 99999999999999999999999999999999999998 998 799988887 99999999999999
Q ss_pred CCCCc--cccCcccccccccccccCCCCCCCCCCCCCccccccccCCC
Q 011005 77 GSIPG--EITKLSRLDYLNLSSNKLSGPVPFSNNDLSSMHTVVSLSPN 122 (496)
Q Consensus 77 ~~~~~--~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~l~~~~~~~~n 122 (496)
.+|. .+.++++|+.|++++|.++|.+| .+..+++|+.+ .++.|
T Consensus 319 -~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L-~L~~N 363 (636)
T 4eco_A 319 -TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASL-NLAYN 363 (636)
T ss_dssp -SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEE-ECCSS
T ss_pred -ccCchhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEE-ECCCC
Confidence 8888 89999999999999999998888 88888888665 34444
No 331
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.38 E-value=8.7e-13 Score=132.74 Aligned_cols=112 Identities=21% Similarity=0.261 Sum_probs=70.8
Q ss_pred ccccCChhccCCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCCCCcc
Q 011005 3 KIGIIPPEIGNLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGSIPGE 82 (496)
Q Consensus 3 ~~~~lp~~~~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~ 82 (496)
.++.+|..+. ++++.|+|++|+|++..+..|.++++|+.|+|++|+|++..+..|.++++|+.|+|++|++++..+..
T Consensus 54 ~l~~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 131 (440)
T 3zyj_A 54 NLREVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGA 131 (440)
T ss_dssp CCSSCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTT
T ss_pred CcCcCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhH
Confidence 4555665443 45666666666666555566666666666666666666555566666666666666666666444445
Q ss_pred ccCcccccccccccccCCCCCCCCCCCCCccccc
Q 011005 83 ITKLSRLDYLNLSSNKLSGPVPFSNNDLSSMHTV 116 (496)
Q Consensus 83 ~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~l~~~ 116 (496)
|..+++|+.|++++|.|+...+..|..+++|+.+
T Consensus 132 ~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L 165 (440)
T 3zyj_A 132 FVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRL 165 (440)
T ss_dssp SCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEE
T ss_pred hhccccCceeeCCCCcccccCHHHhhhCcccCEe
Confidence 6666666666666666665555566666666443
No 332
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.38 E-value=9.1e-13 Score=127.41 Aligned_cols=106 Identities=20% Similarity=0.245 Sum_probs=72.3
Q ss_pred CccccCChhccCCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCCCCc
Q 011005 2 YKIGIIPPEIGNLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGSIPG 81 (496)
Q Consensus 2 n~~~~lp~~~~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~ 81 (496)
|+++.+|..+. ++|+.|+|++|.+++..|..|..+++|+.|+|++|+|++..|..+..+++|+.|+|++|+++ .+|.
T Consensus 182 n~l~~l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~ 258 (332)
T 2ft3_A 182 AKLTGIPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPA 258 (332)
T ss_dssp SBCSSCCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCT
T ss_pred CCCCccCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecCh
Confidence 45555555443 56777777777777666666777777777777777777655556777777777777777777 6666
Q ss_pred cccCcccccccccccccCCCCCCCCCCCC
Q 011005 82 EITKLSRLDYLNLSSNKLSGPVPFSNNDL 110 (496)
Q Consensus 82 ~~~~l~~L~~l~l~~n~l~~~~~~~~~~l 110 (496)
.+..+++|+.|++++|+|++..+..|..+
T Consensus 259 ~l~~l~~L~~L~l~~N~l~~~~~~~~~~~ 287 (332)
T 2ft3_A 259 GLPDLKLLQVVYLHTNNITKVGVNDFCPV 287 (332)
T ss_dssp TGGGCTTCCEEECCSSCCCBCCTTSSSCS
T ss_pred hhhcCccCCEEECCCCCCCccChhHcccc
Confidence 67777777777777777776666666543
No 333
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.38 E-value=6.3e-13 Score=138.37 Aligned_cols=116 Identities=19% Similarity=0.204 Sum_probs=88.2
Q ss_pred CCccccCCh-hccCCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCCC
Q 011005 1 MYKIGIIPP-EIGNLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGSI 79 (496)
Q Consensus 1 ~n~~~~lp~-~~~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~ 79 (496)
+|+++.++. .|.++++|++|+|++|++++..|+.|.++++|++|+|++|++++..|..|..+++|++|+|++|++++..
T Consensus 37 ~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~ 116 (570)
T 2z63_A 37 FNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLE 116 (570)
T ss_dssp SCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCST
T ss_pred CCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCccccccccccccccccCC
Confidence 366666655 6778888888888888887766777888888888888888887666677888888888888888887544
Q ss_pred CccccCcccccccccccccCCC-CCCCCCCCCCccccc
Q 011005 80 PGEITKLSRLDYLNLSSNKLSG-PVPFSNNDLSSMHTV 116 (496)
Q Consensus 80 ~~~~~~l~~L~~l~l~~n~l~~-~~~~~~~~l~~l~~~ 116 (496)
+..++++++|+.|++++|.+++ .+|..+.++++|+.+
T Consensus 117 ~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L 154 (570)
T 2z63_A 117 NFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHL 154 (570)
T ss_dssp TCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEE
T ss_pred CccccccccccEEecCCCccceecChhhhcccCCCCEE
Confidence 4467788888888888888876 357777777777654
No 334
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.38 E-value=5e-13 Score=115.64 Aligned_cols=99 Identities=25% Similarity=0.346 Sum_probs=88.6
Q ss_pred CCccccCChhccCCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCc--hhhcCCcccCeecccccccCCC
Q 011005 1 MYKIGIIPPEIGNLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIP--PEIASMKYLTQLDLSNNNIQGS 78 (496)
Q Consensus 1 ~n~~~~lp~~~~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p--~~~~~l~~L~~l~l~~N~l~~~ 78 (496)
.|+++.+ ..+..+++|++|+|++|++++.+|..+..+++|+.|+|++|+|++ +| ..+..+++|+.|+|++|.+++.
T Consensus 58 ~n~l~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-~~~~~~l~~l~~L~~L~l~~N~l~~~ 135 (168)
T 2ell_A 58 NVGLISV-SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLNLSGNKLKD-ISTLEPLKKLECLKSLDLFNCEVTNL 135 (168)
T ss_dssp SSCCCCC-SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEECBSSSCCS-SGGGGGGSSCSCCCEEECCSSGGGTS
T ss_pred CCCCCCh-hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEeccCCccCc-chhHHHHhcCCCCCEEEeeCCcCcch
Confidence 4778888 788999999999999999998788888889999999999999995 44 7899999999999999999955
Q ss_pred CC---ccccCcccccccccccccCCC
Q 011005 79 IP---GEITKLSRLDYLNLSSNKLSG 101 (496)
Q Consensus 79 ~~---~~~~~l~~L~~l~l~~n~l~~ 101 (496)
.+ ..+..+++|+.|++++|.+..
T Consensus 136 ~~~~~~~~~~l~~L~~L~l~~n~~~~ 161 (168)
T 2ell_A 136 NDYRESVFKLLPQLTYLDGYDREDQE 161 (168)
T ss_dssp TTHHHHHHTTCSSCCEETTEETTSCB
T ss_pred HHHHHHHHHhCccCcEecCCCCChhh
Confidence 44 489999999999999999983
No 335
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.38 E-value=3.5e-13 Score=137.20 Aligned_cols=117 Identities=25% Similarity=0.272 Sum_probs=103.5
Q ss_pred CCccccCCh-hccCCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCCC
Q 011005 1 MYKIGIIPP-EIGNLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGSI 79 (496)
Q Consensus 1 ~n~~~~lp~-~~~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~ 79 (496)
+|+++.++. .|.++++|++|+|++|.|++..|..|.++++|++|+|++|+|++..+..|.++++|+.|+|++|++++..
T Consensus 41 ~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~ 120 (477)
T 2id5_A 41 KNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILL 120 (477)
T ss_dssp SSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEECTTSCCCEEC
T ss_pred CCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEECCCCccccCC
Confidence 477888765 8999999999999999999888999999999999999999999655566889999999999999999778
Q ss_pred CccccCcccccccccccccCCCCCCCCCCCCCcccccc
Q 011005 80 PGEITKLSRLDYLNLSSNKLSGPVPFSNNDLSSMHTVV 117 (496)
Q Consensus 80 ~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~l~~~~ 117 (496)
+..|..+++|+.|++++|.+++..+..|.++++|+.+.
T Consensus 121 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 158 (477)
T 2id5_A 121 DYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLT 158 (477)
T ss_dssp TTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEE
T ss_pred hhHccccccCCEEECCCCccceeChhhccCCCCCCEEE
Confidence 88899999999999999999988888999999887654
No 336
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.37 E-value=4.2e-13 Score=135.66 Aligned_cols=115 Identities=21% Similarity=0.260 Sum_probs=83.2
Q ss_pred CccccC-ChhccCCCCCCEEeccCCccCCCC-CccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCCC
Q 011005 2 YKIGII-PPEIGNLKNLIKLDVGSNSLIGPI-PSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGSI 79 (496)
Q Consensus 2 n~~~~l-p~~~~~l~~L~~L~l~~n~i~~~~-p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~ 79 (496)
|+++.+ |..|+++++|++|+|++|.+.+.+ |..|..+++|++|+|++|++++..|..|.++++|++|+|++|++++..
T Consensus 40 n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 119 (455)
T 3v47_A 40 NSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAV 119 (455)
T ss_dssp SCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHH
T ss_pred CccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhhccCcccCCEEeCCCCCCCccc
Confidence 566665 446777778888888887776433 556777788888888888877666777777888888888888777544
Q ss_pred Ccc--ccCcccccccccccccCCCCCCCC-CCCCCccccc
Q 011005 80 PGE--ITKLSRLDYLNLSSNKLSGPVPFS-NNDLSSMHTV 116 (496)
Q Consensus 80 ~~~--~~~l~~L~~l~l~~n~l~~~~~~~-~~~l~~l~~~ 116 (496)
+.. +..+++|+.|++++|.+++..|.. +.++++|+.+
T Consensus 120 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L 159 (455)
T 3v47_A 120 LSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVL 159 (455)
T ss_dssp HHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEE
T ss_pred cCcccccCcccCCEEECCCCccCccCcccccCCCCcccEE
Confidence 443 777778888888888887776665 6777777554
No 337
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.37 E-value=3e-13 Score=142.01 Aligned_cols=103 Identities=20% Similarity=0.219 Sum_probs=63.9
Q ss_pred ccCCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCC---CchhhcCCcccCeecccccccCCCCCccccCcc
Q 011005 11 IGNLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGK---IPPEIASMKYLTQLDLSNNNIQGSIPGEITKLS 87 (496)
Q Consensus 11 ~~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~---~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~l~ 87 (496)
+.++++|+.|+|++|.+.+..|..|..+++|+.|+|++|++++. .+..+..+++|+.|+|++|++++..|..+..++
T Consensus 421 ~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~ 500 (606)
T 3t6q_A 421 FQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLK 500 (606)
T ss_dssp TTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCT
T ss_pred hhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhcccc
Confidence 66666666666666666666666666666666666666666541 224456666666666666666655555666666
Q ss_pred cccccccccccCCCCCCCCCCCCCcc
Q 011005 88 RLDYLNLSSNKLSGPVPFSNNDLSSM 113 (496)
Q Consensus 88 ~L~~l~l~~n~l~~~~~~~~~~l~~l 113 (496)
+|+.|++++|++++..|..+..+++|
T Consensus 501 ~L~~L~Ls~N~l~~~~~~~l~~l~~L 526 (606)
T 3t6q_A 501 MMNHVDLSHNRLTSSSIEALSHLKGI 526 (606)
T ss_dssp TCCEEECCSSCCCGGGGGGGTTCCSC
T ss_pred CCCEEECCCCccCcCChhHhCccccc
Confidence 66666666666666555555555555
No 338
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.37 E-value=6.2e-13 Score=138.20 Aligned_cols=112 Identities=22% Similarity=0.219 Sum_probs=93.2
Q ss_pred CCccccCChhccCCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCCCC
Q 011005 1 MYKIGIIPPEIGNLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGSIP 80 (496)
Q Consensus 1 ~n~~~~lp~~~~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~ 80 (496)
+|+++.+|..+. ++|+.|+|++|.|++..|+.|.++++|++|+|++|+|++..|..|.++++|++|+|++|+++ .+|
T Consensus 40 ~~~L~~ip~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp 116 (562)
T 3a79_B 40 NRNLTHVPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQ-NIS 116 (562)
T ss_dssp TSCCCSCCTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCC-EEC
T ss_pred CCCCccCCCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCC-ccC
Confidence 467888888664 78999999999998777788999999999999999998777888889999999999999988 566
Q ss_pred ccccCcccccccccccccCCC-CCCCCCCCCCcccccc
Q 011005 81 GEITKLSRLDYLNLSSNKLSG-PVPFSNNDLSSMHTVV 117 (496)
Q Consensus 81 ~~~~~l~~L~~l~l~~n~l~~-~~~~~~~~l~~l~~~~ 117 (496)
.. .+++|+.|++++|.+++ ..|..|.++++|+.+.
T Consensus 117 ~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~ 152 (562)
T 3a79_B 117 CC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLG 152 (562)
T ss_dssp SC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEE
T ss_pred cc--ccccCCEEECCCCCccccCchHhhcccCcccEEe
Confidence 65 78899999999999887 3467888888886653
No 339
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.37 E-value=5.8e-13 Score=138.01 Aligned_cols=117 Identities=24% Similarity=0.245 Sum_probs=101.0
Q ss_pred CCccccCC-hhccCCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCC-C
Q 011005 1 MYKIGIIP-PEIGNLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQG-S 78 (496)
Q Consensus 1 ~n~~~~lp-~~~~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~-~ 78 (496)
+|+++.++ ..|.++++|++|+|++|++++..|+.|..+++|++|+|++|++++..|..|..+++|++|+|++|++++ .
T Consensus 35 ~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~ 114 (549)
T 2z81_A 35 FNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLG 114 (549)
T ss_dssp SSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSC
T ss_pred CCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccc
Confidence 47788875 489999999999999999998888899999999999999999997777779999999999999999985 3
Q ss_pred CCccccCcccccccccccccCCCCC-CCCCCCCCcccccc
Q 011005 79 IPGEITKLSRLDYLNLSSNKLSGPV-PFSNNDLSSMHTVV 117 (496)
Q Consensus 79 ~~~~~~~l~~L~~l~l~~n~l~~~~-~~~~~~l~~l~~~~ 117 (496)
.|..+.++++|+.|++++|.+.+.+ +..|..+++|+.+.
T Consensus 115 ~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~ 154 (549)
T 2z81_A 115 VTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELE 154 (549)
T ss_dssp SSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEE
T ss_pred hhhhhhccCCccEEECCCCccccccCHhhhhcccccCeee
Confidence 5678999999999999999854444 46888999887654
No 340
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.36 E-value=1.7e-12 Score=134.91 Aligned_cols=113 Identities=33% Similarity=0.354 Sum_probs=64.6
Q ss_pred ccCCCCCCEEeccCCccCCCCC-ccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCCCCccccCcccc
Q 011005 11 IGNLKNLIKLDVGSNSLIGPIP-SALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGSIPGEITKLSRL 89 (496)
Q Consensus 11 ~~~l~~L~~L~l~~n~i~~~~p-~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~l~~L 89 (496)
+.++++|+.|+|++|.+++.+| ..+..+++|+.|+|++|+|++.+|..+. ++|+.|+|++|+++ .+|..+..+++|
T Consensus 399 ~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L 475 (562)
T 3a79_B 399 TKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQAL 475 (562)
T ss_dssp TTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCC
T ss_pred hcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCC
Confidence 3444444444444444443222 2244444444444444444433333222 56777777777777 566666678888
Q ss_pred cccccccccCCCCCCCCCCCCCccccccccCCCCCCCC
Q 011005 90 DYLNLSSNKLSGPVPFSNNDLSSMHTVVSLSPNNGLCG 127 (496)
Q Consensus 90 ~~l~l~~n~l~~~~~~~~~~l~~l~~~~~~~~n~~~c~ 127 (496)
+.|++++|+|++..+..+..+++|+. +.+++|++.|+
T Consensus 476 ~~L~L~~N~l~~l~~~~~~~l~~L~~-L~l~~N~~~c~ 512 (562)
T 3a79_B 476 QELNVASNQLKSVPDGVFDRLTSLQY-IWLHDNPWDCT 512 (562)
T ss_dssp SEEECCSSCCCCCCTTSTTTCTTCCC-EECCSCCBCCC
T ss_pred CEEECCCCCCCCCCHHHHhcCCCCCE-EEecCCCcCCC
Confidence 88888888888544444777777744 56777777765
No 341
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.35 E-value=1.4e-12 Score=136.57 Aligned_cols=112 Identities=25% Similarity=0.229 Sum_probs=98.2
Q ss_pred CCccccCCh-hccCCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCCC
Q 011005 1 MYKIGIIPP-EIGNLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGSI 79 (496)
Q Consensus 1 ~n~~~~lp~-~~~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~ 79 (496)
+|.++.+|+ .|+++++|++|+|++|.|++..|..|+.+++|++|+|++|.|++..+..|.++++|++|+|++|.+++..
T Consensus 84 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~ 163 (597)
T 3oja_B 84 DLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIE 163 (597)
T ss_dssp TSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCC
T ss_pred CCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCC
Confidence 477888876 8999999999999999999988888999999999999999999655555799999999999999999888
Q ss_pred CccccCcccccccccccccCCCCCCCCCCCCCcccc
Q 011005 80 PGEITKLSRLDYLNLSSNKLSGPVPFSNNDLSSMHT 115 (496)
Q Consensus 80 ~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~l~~ 115 (496)
|..|..+++|+.|++++|.+++... ..+++|..
T Consensus 164 ~~~~~~l~~L~~L~L~~N~l~~~~~---~~l~~L~~ 196 (597)
T 3oja_B 164 DDTFQATTSLQNLQLSSNRLTHVDL---SLIPSLFH 196 (597)
T ss_dssp TTTTTTCTTCCEEECTTSCCSBCCG---GGCTTCSE
T ss_pred hhhhhcCCcCcEEECcCCCCCCcCh---hhhhhhhh
Confidence 8899999999999999999997643 34445533
No 342
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.35 E-value=1.2e-12 Score=134.86 Aligned_cols=114 Identities=30% Similarity=0.345 Sum_probs=66.2
Q ss_pred hccCCCCCCEEeccCCccCCCCCc-cCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCCCCccccCccc
Q 011005 10 EIGNLKNLIKLDVGSNSLIGPIPS-ALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGSIPGEITKLSR 88 (496)
Q Consensus 10 ~~~~l~~L~~L~l~~n~i~~~~p~-~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~l~~ 88 (496)
.+.++++|++|+|++|.+++.+|. .+..+++|+.|+|++|++++.+|..+. ++|+.|+|++|+++ .+|..+..+++
T Consensus 369 ~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~ 445 (520)
T 2z7x_B 369 MTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEA 445 (520)
T ss_dssp HHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTT
T ss_pred HHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCCC
Confidence 344445555555555554442332 244445555555555555444443332 56777777777777 66666667777
Q ss_pred ccccccccccCCCCCCCCCCCCCccccccccCCCCCCCC
Q 011005 89 LDYLNLSSNKLSGPVPFSNNDLSSMHTVVSLSPNNGLCG 127 (496)
Q Consensus 89 L~~l~l~~n~l~~~~~~~~~~l~~l~~~~~~~~n~~~c~ 127 (496)
|+.|++++|++++..+..+..+++|+. +.+++|+..|+
T Consensus 446 L~~L~L~~N~l~~l~~~~~~~l~~L~~-L~l~~N~~~c~ 483 (520)
T 2z7x_B 446 LQELNVASNQLKSVPDGIFDRLTSLQK-IWLHTNPWDCS 483 (520)
T ss_dssp CCEEECCSSCCCCCCTTTTTTCTTCCE-EECCSSCBCCC
T ss_pred CCEEECCCCcCCccCHHHhccCCcccE-EECcCCCCccc
Confidence 788888888777544444777777754 45667776664
No 343
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.35 E-value=1.3e-12 Score=127.08 Aligned_cols=106 Identities=23% Similarity=0.238 Sum_probs=93.9
Q ss_pred CEEeccCC-ccCCCCCccCCCCCCCCEEeccC-CcCCCCCchhhcCCcccCeecccccccCCCCCccccCcccccccccc
Q 011005 18 IKLDVGSN-SLIGPIPSALGSLTNLSNLDLSS-NKLSGKIPPEIASMKYLTQLDLSNNNIQGSIPGEITKLSRLDYLNLS 95 (496)
Q Consensus 18 ~~L~l~~n-~i~~~~p~~~~~l~~L~~l~l~~-n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~l~~L~~l~l~ 95 (496)
..++++++ +|+ .+|. +..+++|+.|+|++ |+|++..|..|.+|++|+.|+|++|+|++..|..|.+|++|+.|+|+
T Consensus 11 ~~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 88 (347)
T 2ifg_A 11 SGLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLS 88 (347)
T ss_dssp SCEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECC
T ss_pred CEEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCC
Confidence 45799998 898 5788 99999999999996 99997777899999999999999999998888899999999999999
Q ss_pred cccCCCCCCCCCCCCCccccccccCCCCCCCC
Q 011005 96 SNKLSGPVPFSNNDLSSMHTVVSLSPNNGLCG 127 (496)
Q Consensus 96 ~n~l~~~~~~~~~~l~~l~~~~~~~~n~~~c~ 127 (496)
+|+|++..+..|..++ |+. +.+.+|+..|.
T Consensus 89 ~N~l~~~~~~~~~~~~-L~~-l~l~~N~~~c~ 118 (347)
T 2ifg_A 89 FNALESLSWKTVQGLS-LQE-LVLSGNPLHCS 118 (347)
T ss_dssp SSCCSCCCSTTTCSCC-CCE-EECCSSCCCCC
T ss_pred CCccceeCHHHcccCC-ceE-EEeeCCCccCC
Confidence 9999988888887776 744 56788888875
No 344
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.35 E-value=1.7e-12 Score=125.42 Aligned_cols=115 Identities=23% Similarity=0.304 Sum_probs=95.5
Q ss_pred CccccCChhccCCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCCCCc
Q 011005 2 YKIGIIPPEIGNLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGSIPG 81 (496)
Q Consensus 2 n~~~~lp~~~~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~ 81 (496)
|.++.+|..+. ++|+.|+|++|.|++..|..|.++++|++|+|++|+|++..|..|..+++|++|+|++|+++ .+|.
T Consensus 43 ~~l~~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~ 119 (332)
T 2ft3_A 43 LGLKAVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLV-EIPP 119 (332)
T ss_dssp SCCSSCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSCCC-SCCS
T ss_pred CCccccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCCcCC-ccCc
Confidence 56777887664 68999999999998777788999999999999999999777888999999999999999998 6666
Q ss_pred cccCcccccccccccccCCCCCCCCCCCCCccccccccCCC
Q 011005 82 EITKLSRLDYLNLSSNKLSGPVPFSNNDLSSMHTVVSLSPN 122 (496)
Q Consensus 82 ~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~l~~~~~~~~n 122 (496)
.+. ++|+.|++++|.+++..+..|..+++|+.+ .++.|
T Consensus 120 ~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L-~l~~n 157 (332)
T 2ft3_A 120 NLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCI-EMGGN 157 (332)
T ss_dssp SCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEE-ECCSC
T ss_pred ccc--ccCCEEECCCCccCccCHhHhCCCccCCEE-ECCCC
Confidence 555 789999999999998777788888888665 34444
No 345
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.34 E-value=2e-12 Score=127.96 Aligned_cols=113 Identities=25% Similarity=0.225 Sum_probs=97.6
Q ss_pred CCccccCCh-hccCCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCCC
Q 011005 1 MYKIGIIPP-EIGNLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGSI 79 (496)
Q Consensus 1 ~n~~~~lp~-~~~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~ 79 (496)
+|+++.+|. .|.++++|++|+|++|.+++..|..|..+++|++|+|++|+|+...+..|..+++|++|+|++|++++..
T Consensus 78 ~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~ 157 (390)
T 3o6n_A 78 DLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIE 157 (390)
T ss_dssp TSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCC
T ss_pred CCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEEECCCCccCccC
Confidence 477888876 8999999999999999999888888999999999999999999544444799999999999999999777
Q ss_pred CccccCcccccccccccccCCCCCCCCCCCCCccccc
Q 011005 80 PGEITKLSRLDYLNLSSNKLSGPVPFSNNDLSSMHTV 116 (496)
Q Consensus 80 ~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~l~~~ 116 (496)
+..+..+++|+.|++++|.+++.. +..+++|+.+
T Consensus 158 ~~~~~~l~~L~~L~l~~n~l~~~~---~~~l~~L~~L 191 (390)
T 3o6n_A 158 DDTFQATTSLQNLQLSSNRLTHVD---LSLIPSLFHA 191 (390)
T ss_dssp TTTTSSCTTCCEEECCSSCCSBCC---GGGCTTCSEE
T ss_pred hhhccCCCCCCEEECCCCcCCccc---ccccccccee
Confidence 888999999999999999999763 4445555443
No 346
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.34 E-value=5.2e-13 Score=143.88 Aligned_cols=112 Identities=20% Similarity=0.357 Sum_probs=99.4
Q ss_pred CChhcc--CCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCc-CCC-CCchhhcCCc-------ccCeeccccccc
Q 011005 7 IPPEIG--NLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNK-LSG-KIPPEIASMK-------YLTQLDLSNNNI 75 (496)
Q Consensus 7 lp~~~~--~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~-l~~-~~p~~~~~l~-------~L~~l~l~~N~l 75 (496)
+|..++ +|++|+.|+|++|++.+.+|..|+++++|+.|+|++|+ +++ .+|..+..++ +|+.|+|++|++
T Consensus 481 iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L 560 (876)
T 4ecn_A 481 ENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNL 560 (876)
T ss_dssp TTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCC
T ss_pred CChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcC
Confidence 999877 99999999999999999999999999999999999998 997 7888777766 999999999999
Q ss_pred CCCCCc--cccCcccccccccccccCCCCCCCCCCCCCccccccccCCC
Q 011005 76 QGSIPG--EITKLSRLDYLNLSSNKLSGPVPFSNNDLSSMHTVVSLSPN 122 (496)
Q Consensus 76 ~~~~~~--~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~l~~~~~~~~n 122 (496)
+ .+|. .+.++++|+.|++++|.++ .+| .|..+++|+.|. ++.|
T Consensus 561 ~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~-Ls~N 605 (876)
T 4ecn_A 561 E-EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLK-LDYN 605 (876)
T ss_dssp C-BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEE-CCSS
T ss_pred C-ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcceEEE-CcCC
Confidence 9 8888 8999999999999999999 777 888888886653 4444
No 347
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.34 E-value=7.7e-13 Score=136.74 Aligned_cols=102 Identities=25% Similarity=0.393 Sum_probs=92.7
Q ss_pred CCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCCCCccccCcccccccccc
Q 011005 16 NLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGSIPGEITKLSRLDYLNLS 95 (496)
Q Consensus 16 ~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~l~~L~~l~l~ 95 (496)
.|+.|+|++|+|++ +|. |+.+++|+.|+|++|+|+ .+|..++.|++|+.|+|++|+|++ +| .++.+++|+.|+|+
T Consensus 442 ~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls 516 (567)
T 1dce_A 442 DVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLC 516 (567)
T ss_dssp TCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECC
T ss_pred CceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECC
Confidence 58999999999995 676 999999999999999999 889999999999999999999995 77 89999999999999
Q ss_pred cccCCCCC-CCCCCCCCccccccccCCCC
Q 011005 96 SNKLSGPV-PFSNNDLSSMHTVVSLSPNN 123 (496)
Q Consensus 96 ~n~l~~~~-~~~~~~l~~l~~~~~~~~n~ 123 (496)
+|.|++.. |..+..+++|+.+ .+++|+
T Consensus 517 ~N~l~~~~~p~~l~~l~~L~~L-~L~~N~ 544 (567)
T 1dce_A 517 NNRLQQSAAIQPLVSCPRLVLL-NLQGNS 544 (567)
T ss_dssp SSCCCSSSTTGGGGGCTTCCEE-ECTTSG
T ss_pred CCCCCCCCCcHHHhcCCCCCEE-EecCCc
Confidence 99999887 9999999999664 555554
No 348
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.34 E-value=2.2e-12 Score=137.27 Aligned_cols=118 Identities=21% Similarity=0.245 Sum_probs=106.1
Q ss_pred CccccCChhccCCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCCCCc
Q 011005 2 YKIGIIPPEIGNLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGSIPG 81 (496)
Q Consensus 2 n~~~~lp~~~~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~ 81 (496)
++++.+|..+. ++|++|+|++|.+++..+..|.++++|++|+|++|.+++..|..|.++++|++|+|++|++++..+.
T Consensus 14 ~~L~~ip~~~~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~ 91 (680)
T 1ziw_A 14 LKLTQVPDDLP--TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDK 91 (680)
T ss_dssp SCCSSCCSCSC--TTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTT
T ss_pred CCccccccccC--CCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChh
Confidence 67888998775 7999999999999988888899999999999999999988899999999999999999999965556
Q ss_pred cccCcccccccccccccCCCCCCCCCCCCCccccccccCCC
Q 011005 82 EITKLSRLDYLNLSSNKLSGPVPFSNNDLSSMHTVVSLSPN 122 (496)
Q Consensus 82 ~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~l~~~~~~~~n 122 (496)
.|+++++|+.|++++|.+++..|..|.++++|+.+ .++.|
T Consensus 92 ~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L-~Ls~n 131 (680)
T 1ziw_A 92 TFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITL-DLSHN 131 (680)
T ss_dssp TTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEE-ECCSS
T ss_pred hhccCCCCCEEECCCCccCccChhHccccCCCCEE-ECCCC
Confidence 79999999999999999998888999999999765 34444
No 349
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.33 E-value=2e-12 Score=124.94 Aligned_cols=110 Identities=25% Similarity=0.333 Sum_probs=68.6
Q ss_pred CccccCChhccCCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCCCCc
Q 011005 2 YKIGIIPPEIGNLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGSIPG 81 (496)
Q Consensus 2 n~~~~lp~~~~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~ 81 (496)
+.+..+|..+. ++|+.|+|++|+|++..+..|.++++|++|+|++|++++..|..|..+++|++|+|++|+++ .+|.
T Consensus 41 ~~l~~lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~ 117 (330)
T 1xku_A 41 LGLEKVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK-ELPE 117 (330)
T ss_dssp SCCCSCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCS-BCCS
T ss_pred CCccccCccCC--CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCcCC-ccCh
Confidence 44555665443 46666777777776555556666777777777777776555666666777777777777666 4554
Q ss_pred cccCcccccccccccccCCCCCCCCCCCCCccccc
Q 011005 82 EITKLSRLDYLNLSSNKLSGPVPFSNNDLSSMHTV 116 (496)
Q Consensus 82 ~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~l~~~ 116 (496)
.+. ++|+.|++++|.+++..+..|.++++|+.+
T Consensus 118 ~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 150 (330)
T 1xku_A 118 KMP--KTLQELRVHENEITKVRKSVFNGLNQMIVV 150 (330)
T ss_dssp SCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEE
T ss_pred hhc--ccccEEECCCCcccccCHhHhcCCccccEE
Confidence 443 466666666666665555555666665443
No 350
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.33 E-value=5.3e-13 Score=127.87 Aligned_cols=98 Identities=20% Similarity=0.262 Sum_probs=49.5
Q ss_pred Cccc-cCChhc--cCCCCCCEEeccCCccCCCCCccCCCC-----CCCCEEeccCCcCCCCCchhhcCCcccCeeccccc
Q 011005 2 YKIG-IIPPEI--GNLKNLIKLDVGSNSLIGPIPSALGSL-----TNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNN 73 (496)
Q Consensus 2 n~~~-~lp~~~--~~l~~L~~L~l~~n~i~~~~p~~~~~l-----~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N 73 (496)
|+++ .+|..+ ..+++|++|+|++|++++. |..+..+ ++|++|+|++|+|++..|..|..+++|++|+|++|
T Consensus 105 n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N 183 (312)
T 1wwl_A 105 LEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDN 183 (312)
T ss_dssp EBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSC
T ss_pred CcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCC
Confidence 3444 345543 5555555555555555544 4444444 55555555555555444455555555555555555
Q ss_pred ccCCC--CCccc--cCcccccccccccccCC
Q 011005 74 NIQGS--IPGEI--TKLSRLDYLNLSSNKLS 100 (496)
Q Consensus 74 ~l~~~--~~~~~--~~l~~L~~l~l~~n~l~ 100 (496)
++.+. .+..+ ..+++|+.|++++|.++
T Consensus 184 ~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~ 214 (312)
T 1wwl_A 184 PELGERGLISALCPLKFPTLQVLALRNAGME 214 (312)
T ss_dssp TTCHHHHHHHHSCTTSCTTCCEEECTTSCCC
T ss_pred CcCcchHHHHHHHhccCCCCCEEECCCCcCc
Confidence 54432 12222 44455555555555544
No 351
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.32 E-value=5.7e-13 Score=127.97 Aligned_cols=121 Identities=22% Similarity=0.255 Sum_probs=72.6
Q ss_pred CccccCCh-hccCCCCCCEEeccCCccCCCCCccC-CCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCCC
Q 011005 2 YKIGIIPP-EIGNLKNLIKLDVGSNSLIGPIPSAL-GSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGSI 79 (496)
Q Consensus 2 n~~~~lp~-~~~~l~~L~~L~l~~n~i~~~~p~~~-~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~ 79 (496)
|+++.+++ .++.+++|+.|+|++|.+++..|..+ ..+++|++|+|++|+|++ +| ....+++|+.|+|++|+++ .+
T Consensus 130 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~-~~-~~~~l~~L~~L~Ls~N~l~-~l 206 (317)
T 3o53_A 130 NKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYD-VK-GQVVFAKLKTLDLSSNKLA-FM 206 (317)
T ss_dssp SCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCE-EE-CCCCCTTCCEEECCSSCCC-EE
T ss_pred CCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCcc-cc-cccccccCCEEECCCCcCC-cc
Confidence 45555544 56666666666666666665555544 356666666666666663 33 2234666777777777776 34
Q ss_pred CccccCcccccccccccccCCCCCCCCCCCCCccccccccCCCCCCCC
Q 011005 80 PGEITKLSRLDYLNLSSNKLSGPVPFSNNDLSSMHTVVSLSPNNGLCG 127 (496)
Q Consensus 80 ~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~l~~~~~~~~n~~~c~ 127 (496)
|..+..+++|+.|++++|.|+ .+|..+..+++|+. +.+++|+..|+
T Consensus 207 ~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~l~~L~~-L~l~~N~~~~~ 252 (317)
T 3o53_A 207 GPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEH-FDLRGNGFHCG 252 (317)
T ss_dssp CGGGGGGTTCSEEECTTSCCC-EECTTCCCCTTCCE-EECTTCCCBHH
T ss_pred hhhhcccCcccEEECcCCccc-chhhHhhcCCCCCE-EEccCCCccCc
Confidence 444666677777777777776 34555666666643 34555655543
No 352
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.32 E-value=1.8e-12 Score=141.11 Aligned_cols=115 Identities=25% Similarity=0.265 Sum_probs=68.5
Q ss_pred CccccCC-hhccCCCCCCEEeccCCccCCCC-CccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCCC
Q 011005 2 YKIGIIP-PEIGNLKNLIKLDVGSNSLIGPI-PSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGSI 79 (496)
Q Consensus 2 n~~~~lp-~~~~~l~~L~~L~l~~n~i~~~~-p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~ 79 (496)
|+|+.++ ..|.++++|++|+|++|.+.+.+ |+.|.++++|++|+|++|.|++..|..|.++++|++|+|++|.+++..
T Consensus 34 N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~ 113 (844)
T 3j0a_A 34 NYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAV 113 (844)
T ss_dssp CCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCEECTTCCCSSCC
T ss_pred CcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEeeCcCCCCCccc
Confidence 5555543 35666666666666666443333 555666666666666666666555666666666666666666666544
Q ss_pred Ccc--ccCcccccccccccccCCCCCC-CCCCCCCccccc
Q 011005 80 PGE--ITKLSRLDYLNLSSNKLSGPVP-FSNNDLSSMHTV 116 (496)
Q Consensus 80 ~~~--~~~l~~L~~l~l~~n~l~~~~~-~~~~~l~~l~~~ 116 (496)
|.. +.++++|+.|++++|.+++..+ ..|.++++|+.|
T Consensus 114 ~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L 153 (844)
T 3j0a_A 114 LKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSI 153 (844)
T ss_dssp STTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEE
T ss_pred ccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEE
Confidence 433 6666666666666666665443 345666666444
No 353
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.32 E-value=9e-13 Score=121.10 Aligned_cols=118 Identities=18% Similarity=0.231 Sum_probs=91.2
Q ss_pred CCc-cccCCh-hccCCCCCCEEeccC-CccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccC---eeccccc-
Q 011005 1 MYK-IGIIPP-EIGNLKNLIKLDVGS-NSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLT---QLDLSNN- 73 (496)
Q Consensus 1 ~n~-~~~lp~-~~~~l~~L~~L~l~~-n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~---~l~l~~N- 73 (496)
.|+ ++.+|. .|.++++|++|+|++ |++++..+..|..+++|+.|+|++|++++ +|. +..+++|+ .|++++|
T Consensus 64 ~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~ 141 (239)
T 2xwt_C 64 IDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNP 141 (239)
T ss_dssp CCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCT
T ss_pred CCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCcc-ccc-cccccccccccEEECCCCc
Confidence 355 788877 788899999999998 88887767788889999999999999885 666 77888887 8888888
Q ss_pred ccCCCCCccccCccccc-ccccccccCCCCCCCCCCCCCccccccccCCC
Q 011005 74 NIQGSIPGEITKLSRLD-YLNLSSNKLSGPVPFSNNDLSSMHTVVSLSPN 122 (496)
Q Consensus 74 ~l~~~~~~~~~~l~~L~-~l~l~~n~l~~~~~~~~~~l~~l~~~~~~~~n 122 (496)
++++..+..|..+++|+ .|++++|.++...+..|.. ++|+.+ .+++|
T Consensus 142 ~l~~i~~~~~~~l~~L~~~L~l~~n~l~~i~~~~~~~-~~L~~L-~L~~n 189 (239)
T 2xwt_C 142 YMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAFNG-TKLDAV-YLNKN 189 (239)
T ss_dssp TCCEECTTTTTTTBSSEEEEECCSCCCCEECTTTTTT-CEEEEE-ECTTC
T ss_pred chhhcCcccccchhcceeEEEcCCCCCcccCHhhcCC-CCCCEE-EcCCC
Confidence 88866666788888888 8888888888555555555 667554 34444
No 354
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.32 E-value=5.9e-12 Score=119.18 Aligned_cols=105 Identities=30% Similarity=0.404 Sum_probs=60.2
Q ss_pred CccccCChhccCCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCCCCc
Q 011005 2 YKIGIIPPEIGNLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGSIPG 81 (496)
Q Consensus 2 n~~~~lp~~~~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~ 81 (496)
|.+..+|. +..+++|+.|+|++|++++..+ +..+++|++|+|++|++++ +| .+..+++|+.|+|++|++++ + .
T Consensus 56 ~~i~~~~~-~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~L~~n~i~~-~-~ 128 (291)
T 1h6t_A 56 SDIKSVQG-IQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLSLEHNGISD-I-N 128 (291)
T ss_dssp SCCCCCTT-GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEECTTSCCCC-C-G
T ss_pred CCcccChh-HhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEEECCCCcCCC-C-h
Confidence 45555543 5666666666666666664332 6666666666666666663 32 36666666666666666653 2 3
Q ss_pred cccCcccccccccccccCCCCCCCCCCCCCcccc
Q 011005 82 EITKLSRLDYLNLSSNKLSGPVPFSNNDLSSMHT 115 (496)
Q Consensus 82 ~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~l~~ 115 (496)
.+..+++|+.|++++|.+++. ..+..+++|+.
T Consensus 129 ~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~ 160 (291)
T 1h6t_A 129 GLVHLPQLESLYLGNNKITDI--TVLSRLTKLDT 160 (291)
T ss_dssp GGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSE
T ss_pred hhcCCCCCCEEEccCCcCCcc--hhhccCCCCCE
Confidence 455566666666666666543 34555555543
No 355
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.30 E-value=7e-13 Score=127.02 Aligned_cols=103 Identities=17% Similarity=0.231 Sum_probs=85.0
Q ss_pred CCCCCCEEeccCCccCCCCCccC--CCCCCCCEEeccCCcCCCCCchhhcCC-----cccCeecccccccCCCCCccccC
Q 011005 13 NLKNLIKLDVGSNSLIGPIPSAL--GSLTNLSNLDLSSNKLSGKIPPEIASM-----KYLTQLDLSNNNIQGSIPGEITK 85 (496)
Q Consensus 13 ~l~~L~~L~l~~n~i~~~~p~~~--~~l~~L~~l~l~~n~l~~~~p~~~~~l-----~~L~~l~l~~N~l~~~~~~~~~~ 85 (496)
++++|++|+|++|++++..|..+ ..+++|++|+|++|+|++. |..+..+ ++|++|+|++|++++..|..+..
T Consensus 93 ~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~ 171 (312)
T 1wwl_A 93 GISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRV 171 (312)
T ss_dssp TTSCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCC
T ss_pred CcCCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhcc
Confidence 78899999999999988888876 8899999999999999965 8888777 89999999999998777788999
Q ss_pred cccccccccccccCCCC--CCCC--CCCCCccccc
Q 011005 86 LSRLDYLNLSSNKLSGP--VPFS--NNDLSSMHTV 116 (496)
Q Consensus 86 l~~L~~l~l~~n~l~~~--~~~~--~~~l~~l~~~ 116 (496)
+++|+.|++++|++.+. .+.. +..+++|+.+
T Consensus 172 l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L 206 (312)
T 1wwl_A 172 FPALSTLDLSDNPELGERGLISALCPLKFPTLQVL 206 (312)
T ss_dssp CSSCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEE
T ss_pred CCCCCEEECCCCCcCcchHHHHHHHhccCCCCCEE
Confidence 99999999999998764 2222 3677777654
No 356
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.30 E-value=6e-12 Score=117.31 Aligned_cols=146 Identities=13% Similarity=0.077 Sum_probs=113.0
Q ss_pred HHHHhCCCCcceeeecCCeeEEEEEeCCCcEEEEEEcccchhHHHHHHHHHHHHHHHhhc-ccccccccceeecCCeEEE
Q 011005 201 IEATEDFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVL-HRNIVKLYGYCLHKKCMFL 279 (496)
Q Consensus 201 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~l 279 (496)
....+.|.+...++.|+.+.||++... ++.+++|........ ....+.+|+.+++.+. +..+.++++++...+..++
T Consensus 10 ~~~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~-~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~l 87 (263)
T 3tm0_A 10 KKLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKG-TTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNL 87 (263)
T ss_dssp HHHHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTT-STTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEE
T ss_pred HHHhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCC-CHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEE
Confidence 344567888888888899999999864 688999998753211 1235789999999995 6778889999988889999
Q ss_pred EEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCC----------------------------------
Q 011005 280 IYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDC---------------------------------- 325 (496)
Q Consensus 280 V~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~---------------------------------- 325 (496)
||||++|.++.+.+... .....++.+++.++..||+..
T Consensus 88 v~e~i~G~~l~~~~~~~--------~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (263)
T 3tm0_A 88 LMSEADGVLCSEEYEDE--------QSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWE 159 (263)
T ss_dssp EEECCSSEEHHHHCCTT--------TCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGS
T ss_pred EEEecCCeehhhccCCc--------ccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhcccccccccccc
Confidence 99999999987663211 123367889999999999610
Q ss_pred ----------------------CCCeEEeCCCCCceEecCCCCeEEccccccc
Q 011005 326 ----------------------SPSIIHRDISSNNILLNSKLEAFVADFGTAR 356 (496)
Q Consensus 326 ----------------------~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~ 356 (496)
...++|+|++|.||+++++..+.|+||+.+.
T Consensus 160 ~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 160 EDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp TTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred ccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 1459999999999999876666799998774
No 357
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.30 E-value=5.4e-12 Score=117.60 Aligned_cols=105 Identities=26% Similarity=0.348 Sum_probs=67.4
Q ss_pred CccccCChhccCCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCCCCc
Q 011005 2 YKIGIIPPEIGNLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGSIPG 81 (496)
Q Consensus 2 n~~~~lp~~~~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~ 81 (496)
|+++.+| .+..+++|+.|+|++|+|++..+ +..+++|+.|+|++|+|++ +|... . ++|+.|+|++|++++ ++
T Consensus 51 n~i~~l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~~N~l~~-l~~~~-~-~~L~~L~L~~N~l~~-~~- 122 (263)
T 1xeu_A 51 SNIQSLA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELSVNRNRLKN-LNGIP-S-ACLSRLFLDNNELRD-TD- 122 (263)
T ss_dssp SCCCCCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEECCSSCCSC-CTTCC-C-SSCCEEECCSSCCSB-SG-
T ss_pred CCcccch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEECCCCccCC-cCccc-c-CcccEEEccCCccCC-Ch-
Confidence 5666666 56777777777777777774433 7777777777777777774 44322 2 666666666666663 33
Q ss_pred cccCcccccccccccccCCCCCCCCCCCCCccccc
Q 011005 82 EITKLSRLDYLNLSSNKLSGPVPFSNNDLSSMHTV 116 (496)
Q Consensus 82 ~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~l~~~ 116 (496)
.+..+++|+.|++++|.+++. + .+..+++|+.+
T Consensus 123 ~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L 155 (263)
T 1xeu_A 123 SLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVL 155 (263)
T ss_dssp GGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEE
T ss_pred hhcCcccccEEECCCCcCCCC-h-HHccCCCCCEE
Confidence 466677777777777777654 2 45566666443
No 358
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.29 E-value=7.2e-12 Score=116.72 Aligned_cols=116 Identities=25% Similarity=0.345 Sum_probs=96.9
Q ss_pred CCccccCChhccCCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCCCC
Q 011005 1 MYKIGIIPPEIGNLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGSIP 80 (496)
Q Consensus 1 ~n~~~~lp~~~~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~ 80 (496)
.|+++.+|. +.++++|+.|+|++|++++ +|.. .. ++|+.|+|++|+|++ +| .+..+++|+.|+|++|++++ ++
T Consensus 72 ~N~i~~~~~-l~~l~~L~~L~L~~N~l~~-l~~~-~~-~~L~~L~L~~N~l~~-~~-~l~~l~~L~~L~Ls~N~i~~-~~ 144 (263)
T 1xeu_A 72 HNQISDLSP-LKDLTKLEELSVNRNRLKN-LNGI-PS-ACLSRLFLDNNELRD-TD-SLIHLKNLEILSIRNNKLKS-IV 144 (263)
T ss_dssp SSCCCCCGG-GTTCSSCCEEECCSSCCSC-CTTC-CC-SSCCEEECCSSCCSB-SG-GGTTCTTCCEEECTTSCCCB-CG
T ss_pred CCccCCChh-hccCCCCCEEECCCCccCC-cCcc-cc-CcccEEEccCCccCC-Ch-hhcCcccccEEECCCCcCCC-Ch
Confidence 488899988 9999999999999999995 4543 33 999999999999995 44 69999999999999999995 44
Q ss_pred ccccCcccccccccccccCCCCCCCCCCCCCccccccccCCCCCCCC
Q 011005 81 GEITKLSRLDYLNLSSNKLSGPVPFSNNDLSSMHTVVSLSPNNGLCG 127 (496)
Q Consensus 81 ~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~l~~~~~~~~n~~~c~ 127 (496)
.+..+++|+.|++++|++++. ..+..+++|+.+ .+++|+..+.
T Consensus 145 -~l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L-~l~~N~~~~~ 187 (263)
T 1xeu_A 145 -MLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWI-DLTGQKCVNE 187 (263)
T ss_dssp -GGGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEE-EEEEEEEECC
T ss_pred -HHccCCCCCEEECCCCcCcch--HHhccCCCCCEE-eCCCCcccCC
Confidence 689999999999999999977 678888888654 5556654443
No 359
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.28 E-value=9.2e-12 Score=117.86 Aligned_cols=106 Identities=32% Similarity=0.460 Sum_probs=72.7
Q ss_pred CccccCChhccCCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCCCCc
Q 011005 2 YKIGIIPPEIGNLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGSIPG 81 (496)
Q Consensus 2 n~~~~lp~~~~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~ 81 (496)
|+++.++. +.++++|+.|+|++|.+++ +| .+..+++|+.|+|++|+|++ + +.+..+++|+.|+|++|++++. .
T Consensus 78 n~l~~~~~-l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~L~~n~i~~-~-~~l~~l~~L~~L~l~~n~l~~~--~ 150 (291)
T 1h6t_A 78 NKLTDIKP-LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI--T 150 (291)
T ss_dssp SCCCCCGG-GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEECTTSCCCC-C-GGGGGCTTCCEEECCSSCCCCC--G
T ss_pred CccCCCcc-cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEEECCCCcCCC-C-hhhcCCCCCCEEEccCCcCCcc--h
Confidence 56666665 7777777777777777763 33 37777777777777777774 3 4567777777777777777743 4
Q ss_pred cccCcccccccccccccCCCCCCCCCCCCCccccc
Q 011005 82 EITKLSRLDYLNLSSNKLSGPVPFSNNDLSSMHTV 116 (496)
Q Consensus 82 ~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~l~~~ 116 (496)
.+..+++|+.|++++|.+++..| +..+++|+.+
T Consensus 151 ~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L 183 (291)
T 1h6t_A 151 VLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNL 183 (291)
T ss_dssp GGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEE
T ss_pred hhccCCCCCEEEccCCccccchh--hcCCCccCEE
Confidence 56777777777777777776554 6666666544
No 360
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.28 E-value=9.5e-12 Score=118.82 Aligned_cols=107 Identities=27% Similarity=0.437 Sum_probs=79.1
Q ss_pred CCccccCChhccCCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCCCC
Q 011005 1 MYKIGIIPPEIGNLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGSIP 80 (496)
Q Consensus 1 ~n~~~~lp~~~~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~ 80 (496)
+|++..+| .+..+++|+.|+|++|++++. +. +..+++|++|+|++|++++ +| .+..+++|+.|+|++|++++ ++
T Consensus 50 ~~~i~~l~-~~~~l~~L~~L~L~~n~i~~~-~~-~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~l~~n~l~~-~~ 123 (308)
T 1h6u_A 50 GTGVTTIE-GVQYLNNLIGLELKDNQITDL-AP-LKNLTKITELELSGNPLKN-VS-AIAGLQSIKTLDLTSTQITD-VT 123 (308)
T ss_dssp TSCCCCCT-TGGGCTTCCEEECCSSCCCCC-GG-GTTCCSCCEEECCSCCCSC-CG-GGTTCTTCCEEECTTSCCCC-CG
T ss_pred CCCccCch-hhhccCCCCEEEccCCcCCCC-hh-HccCCCCCEEEccCCcCCC-ch-hhcCCCCCCEEECCCCCCCC-ch
Confidence 35677776 577888888888888888744 43 7888888888888888874 43 67788888888888888874 44
Q ss_pred ccccCcccccccccccccCCCCCCCCCCCCCccccc
Q 011005 81 GEITKLSRLDYLNLSSNKLSGPVPFSNNDLSSMHTV 116 (496)
Q Consensus 81 ~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~l~~~ 116 (496)
. +..+++|+.|++++|.+++..+ +..+++|+.+
T Consensus 124 ~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L 156 (308)
T 1h6u_A 124 P-LAGLSNLQVLYLDLNQITNISP--LAGLTNLQYL 156 (308)
T ss_dssp G-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEE
T ss_pred h-hcCCCCCCEEECCCCccCcCcc--ccCCCCccEE
Confidence 3 7778888888888888876544 6666777554
No 361
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.28 E-value=1e-11 Score=118.54 Aligned_cols=105 Identities=28% Similarity=0.508 Sum_probs=56.6
Q ss_pred CccccCChhccCCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCCCCc
Q 011005 2 YKIGIIPPEIGNLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGSIPG 81 (496)
Q Consensus 2 n~~~~lp~~~~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~ 81 (496)
|+++.+|. +..+++|++|+|++|.+++ ++ .+..+++|+.|+|++|++++ +|. +..+++|+.|+|++|++++. +.
T Consensus 73 n~i~~~~~-~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~-~~ 146 (308)
T 1h6u_A 73 NQITDLAP-LKNLTKITELELSGNPLKN-VS-AIAGLQSIKTLDLTSTQITD-VTP-LAGLSNLQVLYLDLNQITNI-SP 146 (308)
T ss_dssp SCCCCCGG-GTTCCSCCEEECCSCCCSC-CG-GGTTCTTCCEEECTTSCCCC-CGG-GTTCTTCCEEECCSSCCCCC-GG
T ss_pred CcCCCChh-HccCCCCCEEEccCCcCCC-ch-hhcCCCCCCEEECCCCCCCC-chh-hcCCCCCCEEECCCCccCcC-cc
Confidence 44555554 5555666666666666553 22 45555666666666666553 332 55556666666666665532 22
Q ss_pred cccCcccccccccccccCCCCCCCCCCCCCcccc
Q 011005 82 EITKLSRLDYLNLSSNKLSGPVPFSNNDLSSMHT 115 (496)
Q Consensus 82 ~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~l~~ 115 (496)
+..+++|+.|++++|.+++..+ +..+++|+.
T Consensus 147 -l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~ 177 (308)
T 1h6u_A 147 -LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTT 177 (308)
T ss_dssp -GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCE
T ss_pred -ccCCCCccEEEccCCcCCCChh--hcCCCCCCE
Confidence 5555566666666665554333 455555543
No 362
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.26 E-value=7e-14 Score=124.59 Aligned_cols=115 Identities=27% Similarity=0.292 Sum_probs=97.3
Q ss_pred ccccCChhccCCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCCCCcc
Q 011005 3 KIGIIPPEIGNLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGSIPGE 82 (496)
Q Consensus 3 ~~~~lp~~~~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~ 82 (496)
.++.+|..++.+++|++|+|++|++++ +| .+..+++|+.|+|++|+|+ .+|..+..+++|+.|+|++|++++ +| .
T Consensus 36 ~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L~~L~L~~N~l~~-l~-~ 110 (198)
T 1ds9_A 36 PIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIAS-LS-G 110 (198)
T ss_dssp TCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHCSEEEEEEEECCC-HH-H
T ss_pred cHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcCCEEECcCCcCCc-CC-c
Confidence 456666799999999999999999995 67 8999999999999999999 788888889999999999999995 55 6
Q ss_pred ccCcccccccccccccCCCCCC-CCCCCCCccccccccCCCC
Q 011005 83 ITKLSRLDYLNLSSNKLSGPVP-FSNNDLSSMHTVVSLSPNN 123 (496)
Q Consensus 83 ~~~l~~L~~l~l~~n~l~~~~~-~~~~~l~~l~~~~~~~~n~ 123 (496)
+..+++|+.|++++|.+++..+ ..+..+++|+.+ .+.+|+
T Consensus 111 ~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L-~l~~N~ 151 (198)
T 1ds9_A 111 IEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDL-LLAGNP 151 (198)
T ss_dssp HHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEE-EECSCH
T ss_pred cccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEE-EecCCc
Confidence 8899999999999999996433 467788888654 445554
No 363
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.26 E-value=7.5e-12 Score=121.69 Aligned_cols=114 Identities=28% Similarity=0.440 Sum_probs=75.8
Q ss_pred CccccCChhccCCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCCCCc
Q 011005 2 YKIGIIPPEIGNLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGSIPG 81 (496)
Q Consensus 2 n~~~~lp~~~~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~ 81 (496)
|++..++. +..+++|+.|+|++|.+++. +. +..+++|++|+|++|.+++ + +.+..+++|+.|++++|++++ + .
T Consensus 209 n~l~~~~~-~~~~~~L~~L~l~~n~l~~~-~~-~~~l~~L~~L~l~~n~l~~-~-~~~~~l~~L~~L~l~~n~l~~-~-~ 281 (347)
T 4fmz_A 209 NQITDITP-VANMTRLNSLKIGNNKITDL-SP-LANLSQLTWLEIGTNQISD-I-NAVKDLTKLKMLNVGSNQISD-I-S 281 (347)
T ss_dssp SCCCCCGG-GGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCC-C-GGGTTCTTCCEEECCSSCCCC-C-G
T ss_pred CCCCCCch-hhcCCcCCEEEccCCccCCC-cc-hhcCCCCCEEECCCCccCC-C-hhHhcCCCcCEEEccCCccCC-C-h
Confidence 45555544 66777777777777777743 33 6777777777777777774 3 456777777777777777774 3 3
Q ss_pred cccCcccccccccccccCCCCCCCCCCCCCccccccccCCCC
Q 011005 82 EITKLSRLDYLNLSSNKLSGPVPFSNNDLSSMHTVVSLSPNN 123 (496)
Q Consensus 82 ~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~l~~~~~~~~n~ 123 (496)
.+..+++|+.|++++|++++..|..+..+++|+.+ .+++|+
T Consensus 282 ~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L-~L~~n~ 322 (347)
T 4fmz_A 282 VLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTL-FLSQNH 322 (347)
T ss_dssp GGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEE-ECCSSS
T ss_pred hhcCCCCCCEEECcCCcCCCcChhHhhccccCCEE-EccCCc
Confidence 46677777777777777776666667777777543 344443
No 364
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.26 E-value=1.8e-12 Score=113.08 Aligned_cols=97 Identities=25% Similarity=0.241 Sum_probs=85.9
Q ss_pred CCccccCChhccCCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCch--hhcCCcccCeecccccccCCC
Q 011005 1 MYKIGIIPPEIGNLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPP--EIASMKYLTQLDLSNNNIQGS 78 (496)
Q Consensus 1 ~n~~~~lp~~~~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~--~~~~l~~L~~l~l~~N~l~~~ 78 (496)
.|+++.+ +.+..+++|+.|+|++|+|++..+..|..+++|+.|+|++|+|+ .+|. .+..+++|+.|+|++|.++ .
T Consensus 51 ~N~l~~~-~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~-~ 127 (176)
T 1a9n_A 51 DNEIRKL-DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT-N 127 (176)
T ss_dssp SSCCCEE-CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG-G
T ss_pred CCCCCcc-cccccCCCCCEEECCCCcccccCcchhhcCCCCCEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC-C
Confidence 4777877 67899999999999999999665566699999999999999997 6776 8999999999999999998 5
Q ss_pred CCcc----ccCcccccccccccccCC
Q 011005 79 IPGE----ITKLSRLDYLNLSSNKLS 100 (496)
Q Consensus 79 ~~~~----~~~l~~L~~l~l~~n~l~ 100 (496)
+|.. +..+++|+.|++++|.+.
T Consensus 128 ~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 128 KKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp STTHHHHHHHHCTTCSEETTEECCHH
T ss_pred cHhHHHHHHHHCCccceeCCCcCCHH
Confidence 6664 899999999999999875
No 365
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.24 E-value=2.3e-11 Score=126.44 Aligned_cols=105 Identities=32% Similarity=0.457 Sum_probs=55.2
Q ss_pred CccccCChhccCCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCCCCc
Q 011005 2 YKIGIIPPEIGNLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGSIPG 81 (496)
Q Consensus 2 n~~~~lp~~~~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~ 81 (496)
|++..+|. +..|++|+.|+|++|.|++ +| .+..+++|+.|+|++|+|++ + +.+..|++|+.|+|++|++++. .
T Consensus 75 N~l~~~~~-l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~l--~ 147 (605)
T 1m9s_A 75 NKLTDIKP-LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI--T 147 (605)
T ss_dssp SCCCCCGG-GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCCEEECTTSCCCC-C-GGGGGCTTCSEEECCSSCCCCC--G
T ss_pred CCCCCChh-hccCCCCCEEECcCCCCCC-Ch-hhccCCCCCEEEecCCCCCC-C-ccccCCCccCEEECCCCccCCc--h
Confidence 34444443 4455555555555555542 22 45555555555555555553 2 3355555555566655555532 3
Q ss_pred cccCcccccccccccccCCCCCCCCCCCCCcccc
Q 011005 82 EITKLSRLDYLNLSSNKLSGPVPFSNNDLSSMHT 115 (496)
Q Consensus 82 ~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~l~~ 115 (496)
.+..|++|+.|+|++|.|++..| +..+++|+.
T Consensus 148 ~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~ 179 (605)
T 1m9s_A 148 VLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQN 179 (605)
T ss_dssp GGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCE
T ss_pred hhcccCCCCEEECcCCcCCCchh--hccCCCCCE
Confidence 45556666666666666655444 555555543
No 366
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.24 E-value=7.9e-12 Score=121.72 Aligned_cols=114 Identities=18% Similarity=0.190 Sum_probs=96.5
Q ss_pred CCccccCChhccCCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCch-hhcCCcccCe-ecccccccCCC
Q 011005 1 MYKIGIIPPEIGNLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPP-EIASMKYLTQ-LDLSNNNIQGS 78 (496)
Q Consensus 1 ~n~~~~lp~~~~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~-~~~~l~~L~~-l~l~~N~l~~~ 78 (496)
.|+++.||..+ .+++++|+|++|+|+.+.++.|.++++|++|+|++|++.+.+|. .|.++++|+. +.+++|+++..
T Consensus 18 ~~~Lt~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l 95 (350)
T 4ay9_X 18 ESKVTEIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYI 95 (350)
T ss_dssp STTCCSCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCEE
T ss_pred CCCCCccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCccccc
Confidence 36789999877 36899999999999966667899999999999999999766664 6789999876 67778999977
Q ss_pred CCccccCcccccccccccccCCCCCCCCCCCCCccccc
Q 011005 79 IPGEITKLSRLDYLNLSSNKLSGPVPFSNNDLSSMHTV 116 (496)
Q Consensus 79 ~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~l~~~ 116 (496)
.|+.|..+++|+.|++++|.++...+..+....++..+
T Consensus 96 ~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l 133 (350)
T 4ay9_X 96 NPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLL 133 (350)
T ss_dssp CTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEE
T ss_pred CchhhhhccccccccccccccccCCchhhcccchhhhh
Confidence 78899999999999999999998888777666666444
No 367
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.23 E-value=1.7e-11 Score=127.41 Aligned_cols=113 Identities=27% Similarity=0.390 Sum_probs=95.8
Q ss_pred CCccccCChhccCCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCCCC
Q 011005 1 MYKIGIIPPEIGNLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGSIP 80 (496)
Q Consensus 1 ~n~~~~lp~~~~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~ 80 (496)
.|++..+| .+..|++|+.|+|++|+|++ + +.+..+++|+.|+|++|+|++. ..+..|++|+.|+|++|+|++..|
T Consensus 96 ~N~l~~l~-~l~~l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~ 170 (605)
T 1m9s_A 96 ENKIKDLS-SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP 170 (605)
T ss_dssp SSCCCCCT-TSTTCTTCCEEECTTSCCCC-C-GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG
T ss_pred CCCCCCCh-hhccCCCCCEEEecCCCCCC-C-ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh
Confidence 37788776 78999999999999999985 3 4589999999999999999964 689999999999999999996555
Q ss_pred ccccCcccccccccccccCCCCCCCCCCCCCccccccccCCCC
Q 011005 81 GEITKLSRLDYLNLSSNKLSGPVPFSNNDLSSMHTVVSLSPNN 123 (496)
Q Consensus 81 ~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~l~~~~~~~~n~ 123 (496)
+..+++|+.|+|++|.|++. ..+..+++|+.| .++.|+
T Consensus 171 --l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L-~L~~N~ 208 (605)
T 1m9s_A 171 --LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVL-ELFSQE 208 (605)
T ss_dssp --GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEE-ECCSEE
T ss_pred --hccCCCCCEEECcCCCCCCC--hHHccCCCCCEE-EccCCc
Confidence 99999999999999999975 357888888654 445544
No 368
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.22 E-value=1.7e-11 Score=113.95 Aligned_cols=136 Identities=17% Similarity=0.148 Sum_probs=100.0
Q ss_pred CCCCcceeeecCCeeEEEEEeCCCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccc--cccccceeecCCeEEEEEEe
Q 011005 206 DFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRN--IVKLYGYCLHKKCMFLIYEY 283 (496)
Q Consensus 206 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~~~~~~~~~~~~~lV~e~ 283 (496)
.+.+....+.|..+.||++...+|+.+++|...... ...+.+|+.+++.+.+.+ +.+++++...++..++||||
T Consensus 21 ~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~~----~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~ 96 (264)
T 1nd4_A 21 GYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSGA----LNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGE 96 (264)
T ss_dssp TCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSCT----TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEEC
T ss_pred CCceEecccCCCCceEEEEecCCCCeEEEEeCCccc----chhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEe
Confidence 444433334555699999988778889999976542 145678999999997545 45688888887789999999
Q ss_pred cCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCC--------------------------------------
Q 011005 284 MERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDC-------------------------------------- 325 (496)
Q Consensus 284 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~-------------------------------------- 325 (496)
++|.++. ... .+ ...++.+++..+..||...
T Consensus 97 i~G~~l~--~~~------~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (264)
T 1nd4_A 97 VPGQDLL--SSH------LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGL 165 (264)
T ss_dssp CSSEETT--TSC------CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTC
T ss_pred cCCcccC--cCc------CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCc
Confidence 9998873 221 11 1256778888888888531
Q ss_pred -----------------CCCeEEeCCCCCceEecCCCCeEEccccccc
Q 011005 326 -----------------SPSIIHRDISSNNILLNSKLEAFVADFGTAR 356 (496)
Q Consensus 326 -----------------~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~ 356 (496)
...++|+|++|.||++++++.+.|+|||.+.
T Consensus 166 ~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~ 213 (264)
T 1nd4_A 166 APAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG 213 (264)
T ss_dssp CHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred cHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcc
Confidence 1129999999999999887667799999874
No 369
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.22 E-value=6.3e-12 Score=120.23 Aligned_cols=104 Identities=20% Similarity=0.150 Sum_probs=64.4
Q ss_pred ccCCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCC--Cc--hhhcCCcccCeecccccccCCCCCc----c
Q 011005 11 IGNLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGK--IP--PEIASMKYLTQLDLSNNNIQGSIPG----E 82 (496)
Q Consensus 11 ~~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~--~p--~~~~~l~~L~~l~l~~N~l~~~~~~----~ 82 (496)
+..+++|++|+|++|++++..|..|..+++|++|+|++|++.+. ++ ..+..+++|++|+|++|+++ .++. .
T Consensus 141 ~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l 219 (310)
T 4glp_A 141 QWLKPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGME-TPTGVCAAL 219 (310)
T ss_dssp TTBCSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCC-CHHHHHHHH
T ss_pred hhhccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCC-chHHHHHHH
Confidence 34566677777777777666666666777777777777766531 11 12355666777777777665 3333 2
Q ss_pred ccCcccccccccccccCCCCCCCCCCCC---Ccccc
Q 011005 83 ITKLSRLDYLNLSSNKLSGPVPFSNNDL---SSMHT 115 (496)
Q Consensus 83 ~~~l~~L~~l~l~~n~l~~~~~~~~~~l---~~l~~ 115 (496)
+..+++|+.|++++|.+++..|..+..+ ++|+.
T Consensus 220 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~ 255 (310)
T 4glp_A 220 AAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNS 255 (310)
T ss_dssp HHHTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCC
T ss_pred HhcCCCCCEEECCCCCCCccchhhHHhccCcCcCCE
Confidence 4566777777777777777666666555 35544
No 370
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.22 E-value=1.2e-11 Score=118.25 Aligned_cols=118 Identities=22% Similarity=0.266 Sum_probs=92.6
Q ss_pred CCccccCCh-hccCCCCCCEEeccCCccCCC--C--CccCCCCCCCCEEeccCCcCCCCCch----hhcCCcccCeeccc
Q 011005 1 MYKIGIIPP-EIGNLKNLIKLDVGSNSLIGP--I--PSALGSLTNLSNLDLSSNKLSGKIPP----EIASMKYLTQLDLS 71 (496)
Q Consensus 1 ~n~~~~lp~-~~~~l~~L~~L~l~~n~i~~~--~--p~~~~~l~~L~~l~l~~n~l~~~~p~----~~~~l~~L~~l~l~ 71 (496)
.|+++.+|. .|+++++|++|+|++|++.+. + +..+..+++|++|+|++|+|+ .+|. .+..+++|++|+|+
T Consensus 154 ~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~~l~~L~~L~Ls 232 (310)
T 4glp_A 154 QAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGME-TPTGVCAALAAAGVQPHSLDLS 232 (310)
T ss_dssp CCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCC-CHHHHHHHHHHHTCCCSSEECT
T ss_pred CCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCC-chHHHHHHHHhcCCCCCEEECC
Confidence 477888775 789999999999999998642 2 233578999999999999998 4555 35788999999999
Q ss_pred ccccCCCCCccccCc---ccccccccccccCCCCCCCCCCCCCccccccccCCCC
Q 011005 72 NNNIQGSIPGEITKL---SRLDYLNLSSNKLSGPVPFSNNDLSSMHTVVSLSPNN 123 (496)
Q Consensus 72 ~N~l~~~~~~~~~~l---~~L~~l~l~~n~l~~~~~~~~~~l~~l~~~~~~~~n~ 123 (496)
+|++++..|..+..+ ++|+.|++++|.|+ .+|..+. ++|+.+ .++.|.
T Consensus 233 ~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L-~Ls~N~ 283 (310)
T 4glp_A 233 HNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVL-DLSSNR 283 (310)
T ss_dssp TSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCE-ECCSCC
T ss_pred CCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEE-ECCCCc
Confidence 999997778777776 69999999999999 5566553 566443 445553
No 371
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.21 E-value=4.1e-12 Score=129.33 Aligned_cols=116 Identities=24% Similarity=0.221 Sum_probs=92.8
Q ss_pred CccccCChhccCCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhc-CCcccCeecccccccCCCCC
Q 011005 2 YKIGIIPPEIGNLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIA-SMKYLTQLDLSNNNIQGSIP 80 (496)
Q Consensus 2 n~~~~lp~~~~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~-~l~~L~~l~l~~N~l~~~~~ 80 (496)
|+++.+|. ..+++|+.|+|++|.|++..|..|+.+++|+.|+|++|.|++..|..+. .+++|+.|+|++|.+++. |
T Consensus 109 N~l~~~~~--~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~-~ 185 (487)
T 3oja_A 109 NNISRVSC--SRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-K 185 (487)
T ss_dssp SCCCCEEE--CCCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-E
T ss_pred CcCCCCCc--cccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccc-c
Confidence 55555554 3468899999999999988888899999999999999999987888776 799999999999999854 3
Q ss_pred ccccCcccccccccccccCCCCCCCCCCCCCccccccccCCCC
Q 011005 81 GEITKLSRLDYLNLSSNKLSGPVPFSNNDLSSMHTVVSLSPNN 123 (496)
Q Consensus 81 ~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~l~~~~~~~~n~ 123 (496)
. +..+++|+.|+|++|.|++..| .+..+++|+.+ ++++|.
T Consensus 186 ~-~~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L-~Ls~N~ 225 (487)
T 3oja_A 186 G-QVVFAKLKTLDLSSNKLAFMGP-EFQSAAGVTWI-SLRNNK 225 (487)
T ss_dssp C-CCCCTTCCEEECCSSCCCEECG-GGGGGTTCSEE-ECTTSC
T ss_pred c-cccCCCCCEEECCCCCCCCCCH-hHcCCCCccEE-EecCCc
Confidence 3 4468999999999999997555 48888888654 455543
No 372
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.19 E-value=7.1e-14 Score=124.55 Aligned_cols=112 Identities=23% Similarity=0.284 Sum_probs=96.1
Q ss_pred CCccccCChhccCCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCCCC
Q 011005 1 MYKIGIIPPEIGNLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGSIP 80 (496)
Q Consensus 1 ~n~~~~lp~~~~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~ 80 (496)
+|+++.+| .+.++++|+.|+|++|.|+ .+|..+..+++|+.|+|++|+|++ +| .+..+++|+.|+|++|++++..+
T Consensus 57 ~n~l~~l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~ 132 (198)
T 1ds9_A 57 TNNIEKIS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGE 132 (198)
T ss_dssp EEEESCCC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHH
T ss_pred CCCCcccc-ccccCCCCCEEECCCCCcc-cccchhhcCCcCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhH
Confidence 37788898 8999999999999999999 678888888999999999999995 55 79999999999999999994322
Q ss_pred -ccccCcccccccccccccCCCCCCCC----------CCCCCccccc
Q 011005 81 -GEITKLSRLDYLNLSSNKLSGPVPFS----------NNDLSSMHTV 116 (496)
Q Consensus 81 -~~~~~l~~L~~l~l~~n~l~~~~~~~----------~~~l~~l~~~ 116 (496)
..+..+++|+.|++++|++++..|.. +..+++|+.+
T Consensus 133 ~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~l~~L~~L 179 (198)
T 1ds9_A 133 IDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKRLPNLKKL 179 (198)
T ss_dssp HHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHHHHHCSSCSEE
T ss_pred HHHHhcCCCCCEEEecCCccccccccccchHHHHHHHHHhCCCcEEE
Confidence 47899999999999999998776653 6677777654
No 373
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=99.15 E-value=1.1e-10 Score=113.89 Aligned_cols=142 Identities=20% Similarity=0.298 Sum_probs=105.9
Q ss_pred cceeeecCCeeEEEEEeCCCcEEEEEEcc--cchhHHHHHHHHHHHHHHHhhc--ccccccccceeecC---CeEEEEEE
Q 011005 210 RYCIGTGGYGSVYKAQLPNGKVFALKKLH--TSEELAFIKSFKNEAQVLSQVL--HRNIVKLYGYCLHK---KCMFLIYE 282 (496)
Q Consensus 210 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~--~~~~~~~~~~~~~e~~~l~~l~--h~niv~~~~~~~~~---~~~~lV~e 282 (496)
.+.++.|.++.||+....+ ..+++|+.. ..........+.+|+.+++.+. +..+++++.++.+. +..++|||
T Consensus 43 ~~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme 121 (359)
T 3dxp_A 43 VEQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIME 121 (359)
T ss_dssp EEECCC-CCSCEEEEECSS-CEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEE
T ss_pred EEEcCCcccceEEEEEECC-ceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEE
Confidence 4568999999999998754 678888876 4322122346789999999997 45578888888766 45789999
Q ss_pred ecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCC-------------------------------------
Q 011005 283 YMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDC------------------------------------- 325 (496)
Q Consensus 283 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~------------------------------------- 325 (496)
|++|..+.+... ..++..++..++.+++.+|..||...
T Consensus 122 ~v~G~~l~~~~~-----~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (359)
T 3dxp_A 122 FVSGRVLWDQSL-----PGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPA 196 (359)
T ss_dssp CCCCBCCCCTTC-----TTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHH
T ss_pred ecCCeecCCCcc-----ccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChH
Confidence 999987754221 14677888899999999999999620
Q ss_pred ------------------CCCeEEeCCCCCceEecCCCC--eEEcccccccc
Q 011005 326 ------------------SPSIIHRDISSNNILLNSKLE--AFVADFGTARL 357 (496)
Q Consensus 326 ------------------~~~i~H~dlkp~Nil~~~~~~--~kl~Dfg~~~~ 357 (496)
...++|||++|.||+++.++. +.++||+.+..
T Consensus 197 ~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 197 MDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp HHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred HHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 257999999999999997753 68999998864
No 374
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.14 E-value=5.6e-12 Score=121.01 Aligned_cols=112 Identities=25% Similarity=0.286 Sum_probs=95.6
Q ss_pred CCccccCCh-hc-cCCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCC
Q 011005 1 MYKIGIIPP-EI-GNLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGS 78 (496)
Q Consensus 1 ~n~~~~lp~-~~-~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~ 78 (496)
.|+++.++. .+ ..+++|++|+|++|.|++. |. ...+++|+.|+|++|+|+ .+|+.+..+++|+.|+|++|+++ .
T Consensus 153 ~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~-~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~L~~N~l~-~ 228 (317)
T 3o53_A 153 LNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KG-QVVFAKLKTLDLSSNKLA-FMGPEFQSAAGVTWISLRNNKLV-L 228 (317)
T ss_dssp TSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-EC-CCCCTTCCEEECCSSCCC-EECGGGGGGTTCSEEECTTSCCC-E
T ss_pred CCCCCcccHHHHhhccCcCCEEECCCCcCccc-cc-ccccccCCEEECCCCcCC-cchhhhcccCcccEEECcCCccc-c
Confidence 367777654 55 4799999999999999855 43 445999999999999999 46677999999999999999999 6
Q ss_pred CCccccCcccccccccccccCC-CCCCCCCCCCCccccc
Q 011005 79 IPGEITKLSRLDYLNLSSNKLS-GPVPFSNNDLSSMHTV 116 (496)
Q Consensus 79 ~~~~~~~l~~L~~l~l~~n~l~-~~~~~~~~~l~~l~~~ 116 (496)
+|..+..+++|+.|++++|+++ +..|..+..+++|+.+
T Consensus 229 l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l 267 (317)
T 3o53_A 229 IEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTV 267 (317)
T ss_dssp ECTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHH
T ss_pred hhhHhhcCCCCCEEEccCCCccCcCHHHHHhccccceEE
Confidence 7888999999999999999999 7777888888887654
No 375
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.14 E-value=5.9e-11 Score=120.29 Aligned_cols=105 Identities=34% Similarity=0.516 Sum_probs=64.8
Q ss_pred CccccCChhccCCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCCCCc
Q 011005 2 YKIGIIPPEIGNLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGSIPG 81 (496)
Q Consensus 2 n~~~~lp~~~~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~ 81 (496)
|++..++. +..+++|+.|+|++|.+++..+ +..+++|+.|+|++|++++. +. +..+++|+.|+|++|++++..|
T Consensus 253 n~l~~~~~-~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~-~~-~~~l~~L~~L~L~~n~l~~~~~- 326 (466)
T 1o6v_A 253 NQISNLAP-LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDI-SP-ISNLKNLTYLTLYFNNISDISP- 326 (466)
T ss_dssp SCCCCCGG-GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCC-GG-GGGCTTCSEEECCSSCCSCCGG-
T ss_pred Cccccchh-hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCc-hh-hcCCCCCCEEECcCCcCCCchh-
Confidence 55555554 6667777777777777764333 66667777777777777643 22 6666667777777776664433
Q ss_pred cccCcccccccccccccCCCCCCCCCCCCCcccc
Q 011005 82 EITKLSRLDYLNLSSNKLSGPVPFSNNDLSSMHT 115 (496)
Q Consensus 82 ~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~l~~ 115 (496)
+..+++|+.|++++|++++. ..+..+++|+.
T Consensus 327 -~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~ 357 (466)
T 1o6v_A 327 -VSSLTKLQRLFFYNNKVSDV--SSLANLTNINW 357 (466)
T ss_dssp -GGGCTTCCEEECCSSCCCCC--GGGTTCTTCCE
T ss_pred -hccCccCCEeECCCCccCCc--hhhccCCCCCE
Confidence 55666666666666666654 24555555543
No 376
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.14 E-value=5e-11 Score=115.82 Aligned_cols=106 Identities=28% Similarity=0.496 Sum_probs=66.1
Q ss_pred CccccCChhccCCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCCCCc
Q 011005 2 YKIGIIPPEIGNLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGSIPG 81 (496)
Q Consensus 2 n~~~~lp~~~~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~ 81 (496)
|+++.++. +..+++|+.|++++|.+++..+ +..+++|+.|+|++|++++ +|. +..+++|+.|++++|++++ + .
T Consensus 187 n~l~~~~~-~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~-~~~-~~~l~~L~~L~l~~n~l~~-~-~ 259 (347)
T 4fmz_A 187 NQIEDISP-LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITD-LSP-LANLSQLTWLEIGTNQISD-I-N 259 (347)
T ss_dssp SCCCCCGG-GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCCC-C-G
T ss_pred Cccccccc-ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCC-Ccc-hhcCCCCCEEECCCCccCC-C-h
Confidence 55555554 6666677777777777664333 6666777777777777763 333 6666777777777777663 3 3
Q ss_pred cccCcccccccccccccCCCCCCCCCCCCCccccc
Q 011005 82 EITKLSRLDYLNLSSNKLSGPVPFSNNDLSSMHTV 116 (496)
Q Consensus 82 ~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~l~~~ 116 (496)
.+..+++|+.|++++|.+++. ..+..+++|+.+
T Consensus 260 ~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L 292 (347)
T 4fmz_A 260 AVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSL 292 (347)
T ss_dssp GGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEE
T ss_pred hHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEE
Confidence 466666777777777776654 235556666443
No 377
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.11 E-value=2.1e-10 Score=115.70 Aligned_cols=102 Identities=26% Similarity=0.333 Sum_probs=73.2
Q ss_pred CccccCChhccCCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCCCCc
Q 011005 2 YKIGIIPPEIGNLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGSIPG 81 (496)
Q Consensus 2 n~~~~lp~~~~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~ 81 (496)
|+++.+| .++.+++|++|+|++|++++. | ++.+++|++|+|++|+|++ +| +..+++|++|+|++|++++ +|
T Consensus 52 n~l~~~~-~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~-~~--~~~l~~L~~L~L~~N~l~~-l~- 122 (457)
T 3bz5_A 52 SSITDMT-GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTN-LD--VTPLTKLTYLNCDTNKLTK-LD- 122 (457)
T ss_dssp SCCCCCT-TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSC-CC--CTTCTTCCEEECCSSCCSC-CC-
T ss_pred CCcccCh-hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCce-ee--cCCCCcCCEEECCCCcCCe-ec-
Confidence 5666776 577778888888888887753 3 7777788888888888775 33 7777788888888888774 43
Q ss_pred cccCcccccccccccccCCCCCCCCCCCCCccccc
Q 011005 82 EITKLSRLDYLNLSSNKLSGPVPFSNNDLSSMHTV 116 (496)
Q Consensus 82 ~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~l~~~ 116 (496)
+..+++|+.|++++|.+++. + +..+++|+.+
T Consensus 123 -~~~l~~L~~L~l~~N~l~~l-~--l~~l~~L~~L 153 (457)
T 3bz5_A 123 -VSQNPLLTYLNCARNTLTEI-D--VSHNTQLTEL 153 (457)
T ss_dssp -CTTCTTCCEEECTTSCCSCC-C--CTTCTTCCEE
T ss_pred -CCCCCcCCEEECCCCcccee-c--cccCCcCCEE
Confidence 77777888888888887764 2 5566666443
No 378
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.10 E-value=1.6e-10 Score=117.10 Aligned_cols=111 Identities=32% Similarity=0.547 Sum_probs=86.4
Q ss_pred CccccCChhccCCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCCCCc
Q 011005 2 YKIGIIPPEIGNLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGSIPG 81 (496)
Q Consensus 2 n~~~~lp~~~~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~ 81 (496)
|+++.++ .+..+++|+.|+|++|.+++..| +..+++|+.|+|++|++++ +|. +..+++|+.|+|++|++++..+
T Consensus 231 n~l~~~~-~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~-~~~-~~~l~~L~~L~L~~n~l~~~~~- 304 (466)
T 1o6v_A 231 NQLKDIG-TLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISN-ISP-LAGLTALTNLELNENQLEDISP- 304 (466)
T ss_dssp SCCCCCG-GGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCC-CGG-GTTCTTCSEEECCSSCCSCCGG-
T ss_pred CCcccch-hhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCc-ccc-ccCCCccCeEEcCCCcccCchh-
Confidence 5666664 57788899999999999886544 8888999999999999885 444 8888999999999999885433
Q ss_pred cccCcccccccccccccCCCCCCCCCCCCCccccccccCCC
Q 011005 82 EITKLSRLDYLNLSSNKLSGPVPFSNNDLSSMHTVVSLSPN 122 (496)
Q Consensus 82 ~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~l~~~~~~~~n 122 (496)
+..+++|+.|++++|++++..| +..+++|+.+. +.+|
T Consensus 305 -~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~-l~~n 341 (466)
T 1o6v_A 305 -ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLF-FYNN 341 (466)
T ss_dssp -GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEE-CCSS
T ss_pred -hcCCCCCCEEECcCCcCCCchh--hccCccCCEeE-CCCC
Confidence 7888899999999999987766 66777776543 3444
No 379
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.10 E-value=1.7e-10 Score=118.71 Aligned_cols=84 Identities=26% Similarity=0.425 Sum_probs=43.0
Q ss_pred CccccCChhccCCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCCCCc
Q 011005 2 YKIGIIPPEIGNLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGSIPG 81 (496)
Q Consensus 2 n~~~~lp~~~~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~ 81 (496)
|+|+.+|. +.+ +|+.|+|++|+|++ +|. .+++|+.|+|++|+|++ +|. .+++|+.|+|++|+|++ +|.
T Consensus 110 N~l~~ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~ 177 (571)
T 3cvr_A 110 NRLSTLPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE 177 (571)
T ss_dssp SCCSCCCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC
T ss_pred CCCCCcch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch
Confidence 45555555 433 55555555555553 343 34555555555555553 443 34555555555555553 443
Q ss_pred cccCcccccccccccccCC
Q 011005 82 EITKLSRLDYLNLSSNKLS 100 (496)
Q Consensus 82 ~~~~l~~L~~l~l~~n~l~ 100 (496)
+. ++|+.|+|++|.|+
T Consensus 178 -l~--~~L~~L~Ls~N~L~ 193 (571)
T 3cvr_A 178 -LP--ESLEALDVSTNLLE 193 (571)
T ss_dssp -CC--TTCCEEECCSSCCS
T ss_pred -hh--CCCCEEECcCCCCC
Confidence 33 45555555555555
No 380
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.08 E-value=3e-10 Score=116.92 Aligned_cols=85 Identities=28% Similarity=0.543 Sum_probs=40.3
Q ss_pred CccccCChhccCCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCCCCc
Q 011005 2 YKIGIIPPEIGNLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGSIPG 81 (496)
Q Consensus 2 n~~~~lp~~~~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~ 81 (496)
|+++.+|..+. ++|+.|+|++|+|+ .+| ..+++|+.|+|++|+|++ +|. +.. +|+.|+|++|+|++ +|.
T Consensus 69 n~L~~lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~ 137 (571)
T 3cvr_A 69 LNLSSLPDNLP--PQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE 137 (571)
T ss_dssp SCCSCCCSCCC--TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC
T ss_pred CCCCccCHhHc--CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC
Confidence 44555555442 45555555555555 344 234555555555555553 444 332 44555555555443 333
Q ss_pred cccCcccccccccccccCC
Q 011005 82 EITKLSRLDYLNLSSNKLS 100 (496)
Q Consensus 82 ~~~~l~~L~~l~l~~n~l~ 100 (496)
.+++|+.|++++|.|+
T Consensus 138 ---~l~~L~~L~Ls~N~l~ 153 (571)
T 3cvr_A 138 ---LPALLEYINADNNQLT 153 (571)
T ss_dssp ---CCTTCCEEECCSSCCS
T ss_pred ---cCccccEEeCCCCccC
Confidence 3344444444444444
No 381
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.06 E-value=1.7e-10 Score=112.26 Aligned_cols=122 Identities=18% Similarity=0.167 Sum_probs=97.4
Q ss_pred CCccccCCh-hccCCCCCCEEeccCCccCCCCC-ccCCCCCCCCE-EeccCCcCCCCCchhhcCCcccCeecccccccCC
Q 011005 1 MYKIGIIPP-EIGNLKNLIKLDVGSNSLIGPIP-SALGSLTNLSN-LDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQG 77 (496)
Q Consensus 1 ~n~~~~lp~-~~~~l~~L~~L~l~~n~i~~~~p-~~~~~l~~L~~-l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~ 77 (496)
.|+|+.||+ .|.+|++|++|+|++|++.+.+| +.|.++++|+. +.++.|+|+...|..|..+++|+.|++++|++++
T Consensus 39 ~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~ 118 (350)
T 4ay9_X 39 LTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKH 118 (350)
T ss_dssp SCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSS
T ss_pred CCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCcccccCchhhhhcccccccccccccccc
Confidence 489999998 68999999999999999876555 57899998875 6777899997778889999999999999999996
Q ss_pred CCCccccCccccccccccc-ccCCCCCCCCCCCCCccccccccCCC
Q 011005 78 SIPGEITKLSRLDYLNLSS-NKLSGPVPFSNNDLSSMHTVVSLSPN 122 (496)
Q Consensus 78 ~~~~~~~~l~~L~~l~l~~-n~l~~~~~~~~~~l~~l~~~~~~~~n 122 (496)
..+..+....++..|++.+ |.++...+..|..+......+.++.|
T Consensus 119 ~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N 164 (350)
T 4ay9_X 119 LPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKN 164 (350)
T ss_dssp CCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSS
T ss_pred CCchhhcccchhhhhhhccccccccccccchhhcchhhhhhccccc
Confidence 6666677777888888865 67776667777777643333444444
No 382
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.05 E-value=4.6e-10 Score=113.14 Aligned_cols=98 Identities=24% Similarity=0.327 Sum_probs=82.3
Q ss_pred ccccCChhccCCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCCCCcc
Q 011005 3 KIGIIPPEIGNLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGSIPGE 82 (496)
Q Consensus 3 ~~~~lp~~~~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~ 82 (496)
.++.+ .++.+++|+.|+|++|++++ +| +..+++|+.|++++|++++. .+..+++|+.|+|++|++++ +|
T Consensus 160 ~~~~~--~~~~l~~L~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip-- 228 (457)
T 3bz5_A 160 KITKL--DVTPQTQLTTLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-ID-- 228 (457)
T ss_dssp CCCCC--CCTTCTTCCEEECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CC--
T ss_pred ccccc--ccccCCcCCEEECCCCccce-ec--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-cC--
Confidence 34445 47889999999999999996 55 88999999999999999964 38889999999999999996 56
Q ss_pred ccCcccccccccccccCCCCCCCCCCCCC
Q 011005 83 ITKLSRLDYLNLSSNKLSGPVPFSNNDLS 111 (496)
Q Consensus 83 ~~~l~~L~~l~l~~n~l~~~~~~~~~~l~ 111 (496)
+..+++|+.|++++|++++..+..+.++.
T Consensus 229 ~~~l~~L~~L~l~~N~l~~~~~~~l~~L~ 257 (457)
T 3bz5_A 229 VTPLTQLTYFDCSVNPLTELDVSTLSKLT 257 (457)
T ss_dssp CTTCTTCSEEECCSSCCSCCCCTTCTTCC
T ss_pred ccccCCCCEEEeeCCcCCCcCHHHCCCCC
Confidence 88899999999999999987766665555
No 383
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.00 E-value=1e-09 Score=114.24 Aligned_cols=46 Identities=35% Similarity=0.311 Sum_probs=21.4
Q ss_pred cccCeecccccccCCCCCccccCcccccccccccccCCCCCCCCCCCCCcc
Q 011005 63 KYLTQLDLSNNNIQGSIPGEITKLSRLDYLNLSSNKLSGPVPFSNNDLSSM 113 (496)
Q Consensus 63 ~~L~~l~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~l 113 (496)
++|+.|+|++|+|+ .+|. .+++|+.|++++|.|+ .+|..+.++++|
T Consensus 241 ~~L~~L~Ls~N~L~-~lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L 286 (622)
T 3g06_A 241 SELKELMVSGNRLT-SLPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSE 286 (622)
T ss_dssp TTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTT
T ss_pred CcCcEEECCCCCCC-cCCc---ccccCcEEeCCCCCCC-cCCHHHhhcccc
Confidence 44444444444444 2332 3344555555555555 334445555555
No 384
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=98.99 E-value=9e-12 Score=120.52 Aligned_cols=100 Identities=19% Similarity=0.180 Sum_probs=49.8
Q ss_pred CCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCC-CchhhcCCcccCeecccccccCCCCCccccCcccccccc
Q 011005 15 KNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGK-IPPEIASMKYLTQLDLSNNNIQGSIPGEITKLSRLDYLN 93 (496)
Q Consensus 15 ~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~-~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~l~~L~~l~ 93 (496)
++++.|++++|.+.+..+. +..+++|++|+|++|.+++. +|..+..+++|++|+|++|++++..+..++.+++|+.|+
T Consensus 70 ~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~ 148 (336)
T 2ast_B 70 QGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLN 148 (336)
T ss_dssp TTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEE
T ss_pred ccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEE
Confidence 4555555555555544333 33455555555555555433 444555555555555555555544444555555555555
Q ss_pred cccc-cCCCC-CCCCCCCCCcccc
Q 011005 94 LSSN-KLSGP-VPFSNNDLSSMHT 115 (496)
Q Consensus 94 l~~n-~l~~~-~~~~~~~l~~l~~ 115 (496)
+++| .+++. ++..+..+++|+.
T Consensus 149 L~~~~~l~~~~l~~~~~~~~~L~~ 172 (336)
T 2ast_B 149 LSGCSGFSEFALQTLLSSCSRLDE 172 (336)
T ss_dssp CTTCBSCCHHHHHHHHHHCTTCCE
T ss_pred CCCCCCCCHHHHHHHHhcCCCCCE
Confidence 5555 34431 3333444444433
No 385
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.97 E-value=3.9e-10 Score=107.35 Aligned_cols=183 Identities=21% Similarity=0.198 Sum_probs=121.4
Q ss_pred cceeeecCCeeEEEEEeCCCcEEEEEEcccchhHHHHHHHHHHHHHHHhhc-ccc--cccccceeecCC---eEEEEEEe
Q 011005 210 RYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVL-HRN--IVKLYGYCLHKK---CMFLIYEY 283 (496)
Q Consensus 210 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~-h~n--iv~~~~~~~~~~---~~~lV~e~ 283 (496)
.+.++.|....||+.. ..+++|..... .....+.+|+.+++.+. +.. +.+++....... ..++||++
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~---~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~ 97 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS---RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTK 97 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH---HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEEC
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc---chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcc
Confidence 4568999999999863 45888886543 22356889999999884 333 334444433333 34789999
Q ss_pred cCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCC--------------------------------------
Q 011005 284 MERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDC-------------------------------------- 325 (496)
Q Consensus 284 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~-------------------------------------- 325 (496)
++|.++...... .++..++..++.+++..+..||+..
T Consensus 98 i~G~~l~~~~~~-----~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (304)
T 3sg8_A 98 IKGVPLTPLLLN-----NLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKK 172 (304)
T ss_dssp CCCEECCHHHHH-----TSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHH
T ss_pred cCCeECCccccc-----cCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHH
Confidence 999888654331 4677777888888888888888510
Q ss_pred -----------------CCCeEEeCCCCCceEecC--CCCeEEccccccccccCCCCCcccccccccc---cccccccc-
Q 011005 326 -----------------SPSIIHRDISSNNILLNS--KLEAFVADFGTARLLHADSSNRTLLAGTYGY---IAPELAYT- 382 (496)
Q Consensus 326 -----------------~~~i~H~dlkp~Nil~~~--~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y---~aPE~~~~- 382 (496)
...++|+|++|.||++++ +..+.++||+.+...... .. ......+ ..|+....
T Consensus 173 l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~-~D---l~~~~~~~~~~~~~~~~~~ 248 (304)
T 3sg8_A 173 VDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPD-ND---FISLMEDDEEYGMEFVSKI 248 (304)
T ss_dssp HHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTT-HH---HHTTCCTTTSCCHHHHHHH
T ss_pred HHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChH-HH---HHHHHhhccccCHHHHHHH
Confidence 135899999999999998 456789999998654211 00 0000011 12221110
Q ss_pred -------------CCcCcccchhhHHHHHHHHHhCCCCC
Q 011005 383 -------------MVMTEKCDVYSFGVVTLEVLMGKHPR 408 (496)
Q Consensus 383 -------------~~~~~~~DvwslG~il~el~~g~~p~ 408 (496)
.......+.|++|.++|.+.+|..+|
T Consensus 249 l~~Y~~~~~~~~~~r~~~~~~~~~l~~~~~~~~~g~~~~ 287 (304)
T 3sg8_A 249 LNHYKHKDIPTVLEKYRMKEKYWSFEKIIYGKEYGYMDW 287 (304)
T ss_dssp HHHHTCSCHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHcCCHHH
Confidence 01122368999999999999998886
No 386
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=98.94 E-value=2.5e-09 Score=107.64 Aligned_cols=79 Identities=27% Similarity=0.356 Sum_probs=43.3
Q ss_pred CCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCCCCccccCccccccccc
Q 011005 15 KNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGSIPGEITKLSRLDYLNL 94 (496)
Q Consensus 15 ~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~l~~L~~l~l 94 (496)
++|++|+|++|++++ +| .|+++++|++|++++|++++ +|..+ .+|++|++++|++++ +| .+..+++|+.|++
T Consensus 131 ~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l 202 (454)
T 1jl5_A 131 PLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYA 202 (454)
T ss_dssp TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEEC
T ss_pred CCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEEC
Confidence 456666666666653 44 35666666666666666653 44322 355555555555553 34 3555555555555
Q ss_pred ccccCCC
Q 011005 95 SSNKLSG 101 (496)
Q Consensus 95 ~~n~l~~ 101 (496)
++|.+++
T Consensus 203 ~~N~l~~ 209 (454)
T 1jl5_A 203 DNNSLKK 209 (454)
T ss_dssp CSSCCSS
T ss_pred CCCcCCc
Confidence 5555553
No 387
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=98.94 E-value=3.1e-10 Score=118.16 Aligned_cols=99 Identities=25% Similarity=0.333 Sum_probs=81.2
Q ss_pred CccccCChhccCCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCCCCc
Q 011005 2 YKIGIIPPEIGNLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGSIPG 81 (496)
Q Consensus 2 n~~~~lp~~~~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~ 81 (496)
|+++.+|. .+++|+.|+|++|+|++ +| ..+++|+.|+|++|+|+ .+|. .+++|+.|+|++|+|+ .+|.
T Consensus 211 N~l~~l~~---~~~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~-~lp~---~~~~L~~L~Ls~N~L~-~lp~ 278 (622)
T 3g06_A 211 NRLTSLPA---LPSGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLT-SLPM---LPSGLLSLSVYRNQLT-RLPE 278 (622)
T ss_dssp SCCSSCCC---CCTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCC-SCCG
T ss_pred CcccccCC---CCCCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCC-cCCc---ccccCcEEeCCCCCCC-cCCH
Confidence 44444443 23778999999999985 55 45689999999999999 5776 6789999999999999 7899
Q ss_pred cccCcccccccccccccCCCCCCCCCCCCCc
Q 011005 82 EITKLSRLDYLNLSSNKLSGPVPFSNNDLSS 112 (496)
Q Consensus 82 ~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~ 112 (496)
.+.++++|+.|++++|++++..|..+..+++
T Consensus 279 ~l~~l~~L~~L~L~~N~l~~~~~~~l~~L~~ 309 (622)
T 3g06_A 279 SLIHLSSETTVNLEGNPLSERTLQALREITS 309 (622)
T ss_dssp GGGGSCTTCEEECCSCCCCHHHHHHHHHHHH
T ss_pred HHhhccccCEEEecCCCCCCcCHHHHHhccc
Confidence 9999999999999999999887776665543
No 388
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=98.89 E-value=5.3e-11 Score=115.08 Aligned_cols=91 Identities=24% Similarity=0.296 Sum_probs=53.0
Q ss_pred CChhccCCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCC-cCCCC-CchhhcCCcccCeeccccc-ccCCC-CCcc
Q 011005 7 IPPEIGNLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSN-KLSGK-IPPEIASMKYLTQLDLSNN-NIQGS-IPGE 82 (496)
Q Consensus 7 lp~~~~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n-~l~~~-~p~~~~~l~~L~~l~l~~N-~l~~~-~~~~ 82 (496)
+|..+..+++|++|+|++|.+++..|..+..+++|++|+|++| .+++. +|..+..+++|+.|+|++| .+++. ++..
T Consensus 110 ~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~ 189 (336)
T 2ast_B 110 LHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVA 189 (336)
T ss_dssp HHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHH
T ss_pred HHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHH
Confidence 4555666666666666666666555566666666666666666 45531 4444555666666666666 55532 3444
Q ss_pred ccCcc-cccccccccc
Q 011005 83 ITKLS-RLDYLNLSSN 97 (496)
Q Consensus 83 ~~~l~-~L~~l~l~~n 97 (496)
+..++ +|+.|++++|
T Consensus 190 ~~~l~~~L~~L~l~~~ 205 (336)
T 2ast_B 190 VAHVSETITQLNLSGY 205 (336)
T ss_dssp HHHSCTTCCEEECCSC
T ss_pred HHhcccCCCEEEeCCC
Confidence 44555 5555555555
No 389
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=98.88 E-value=4.6e-11 Score=117.96 Aligned_cols=107 Identities=15% Similarity=0.168 Sum_probs=69.3
Q ss_pred hhccCCCCCCEEeccCCccCC-----CCCccCCCCCCCCEEeccCCcCC----CCCchhhcCCcccCeecccccccCCC-
Q 011005 9 PEIGNLKNLIKLDVGSNSLIG-----PIPSALGSLTNLSNLDLSSNKLS----GKIPPEIASMKYLTQLDLSNNNIQGS- 78 (496)
Q Consensus 9 ~~~~~l~~L~~L~l~~n~i~~-----~~p~~~~~l~~L~~l~l~~n~l~----~~~p~~~~~l~~L~~l~l~~N~l~~~- 78 (496)
..+..+++|+.|+|++|+|+. ..|..+..+++|+.|+|++|.|+ +.+|..+..+++|+.|+|++|++++.
T Consensus 181 ~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~ 260 (386)
T 2ca6_A 181 KTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARG 260 (386)
T ss_dssp HHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHH
T ss_pred HHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhh
Confidence 355567777777777777652 23335667777777777777774 35666777777777777777777643
Q ss_pred ---CCccc--cCcccccccccccccCCC----CCCCCC-CCCCcccc
Q 011005 79 ---IPGEI--TKLSRLDYLNLSSNKLSG----PVPFSN-NDLSSMHT 115 (496)
Q Consensus 79 ---~~~~~--~~l~~L~~l~l~~n~l~~----~~~~~~-~~l~~l~~ 115 (496)
++..+ +.+++|+.|+|++|.+++ .+|..+ .++++|+.
T Consensus 261 ~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~ 307 (386)
T 2ca6_A 261 AAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLF 307 (386)
T ss_dssp HHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCE
T ss_pred HHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceE
Confidence 34455 336777777777777775 355544 44566644
No 390
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=98.86 E-value=1.8e-10 Score=112.68 Aligned_cols=106 Identities=22% Similarity=0.193 Sum_probs=84.7
Q ss_pred CccccCCh-hccCCCCCCEEeccCCccCCCCC----ccCCCCC-CCCEEeccCCcCCCCCchhhcCC-----cccCeecc
Q 011005 2 YKIGIIPP-EIGNLKNLIKLDVGSNSLIGPIP----SALGSLT-NLSNLDLSSNKLSGKIPPEIASM-----KYLTQLDL 70 (496)
Q Consensus 2 n~~~~lp~-~~~~l~~L~~L~l~~n~i~~~~p----~~~~~l~-~L~~l~l~~n~l~~~~p~~~~~l-----~~L~~l~l 70 (496)
|++....+ .+...++|++|+|++|.|++..+ +.|..++ +|++|+|++|+|++..+..+..+ ++|+.|+|
T Consensus 8 n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~L 87 (362)
T 3goz_A 8 HPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNL 87 (362)
T ss_dssp CTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEEC
T ss_pred ccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEEC
Confidence 55665444 44555569999999999997666 7788898 89999999999998778777775 99999999
Q ss_pred cccccCCCCCccccC----c-ccccccccccccCCCCCCCCC
Q 011005 71 SNNNIQGSIPGEITK----L-SRLDYLNLSSNKLSGPVPFSN 107 (496)
Q Consensus 71 ~~N~l~~~~~~~~~~----l-~~L~~l~l~~n~l~~~~~~~~ 107 (496)
++|++++..+..+.. + ++|+.|++++|.+++..+..+
T Consensus 88 s~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l 129 (362)
T 3goz_A 88 SGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEF 129 (362)
T ss_dssp CSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHH
T ss_pred cCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHH
Confidence 999998666665444 3 899999999999987665443
No 391
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=98.85 E-value=1.4e-10 Score=114.49 Aligned_cols=97 Identities=26% Similarity=0.328 Sum_probs=83.6
Q ss_pred CChhccCCCCCCEEeccCCccC----CCCCccCCCCCCCCEEeccCCcCCCC----Cchhhc--CCcccCeecccccccC
Q 011005 7 IPPEIGNLKNLIKLDVGSNSLI----GPIPSALGSLTNLSNLDLSSNKLSGK----IPPEIA--SMKYLTQLDLSNNNIQ 76 (496)
Q Consensus 7 lp~~~~~l~~L~~L~l~~n~i~----~~~p~~~~~l~~L~~l~l~~n~l~~~----~p~~~~--~l~~L~~l~l~~N~l~ 76 (496)
+|..+..+++|+.|+|++|.|+ +.+|..+..+++|+.|+|++|.|++. +|..+. .+++|+.|+|++|.++
T Consensus 208 ~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~ 287 (386)
T 2ca6_A 208 LLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIE 287 (386)
T ss_dssp HHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCB
T ss_pred HHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCC
Confidence 3447889999999999999995 56788899999999999999999865 566774 4999999999999999
Q ss_pred C----CCCccc-cCcccccccccccccCCCCC
Q 011005 77 G----SIPGEI-TKLSRLDYLNLSSNKLSGPV 103 (496)
Q Consensus 77 ~----~~~~~~-~~l~~L~~l~l~~n~l~~~~ 103 (496)
+ .+|..+ .++++|+.|++++|++++..
T Consensus 288 ~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~ 319 (386)
T 2ca6_A 288 LDAVRTLKTVIDEKMPDLLFLELNGNRFSEED 319 (386)
T ss_dssp HHHHHHHHHHHHHHCTTCCEEECTTSBSCTTS
T ss_pred HHHHHHHHHHHHhcCCCceEEEccCCcCCcch
Confidence 6 377777 66899999999999999654
No 392
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=98.85 E-value=6.9e-09 Score=104.39 Aligned_cols=100 Identities=23% Similarity=0.423 Sum_probs=72.5
Q ss_pred CccccCChhccCCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCCCCc
Q 011005 2 YKIGIIPPEIGNLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGSIPG 81 (496)
Q Consensus 2 n~~~~lp~~~~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~ 81 (496)
|+++.+|.. +++|+.|++++|++++ +|.. .++|++|+|++|++++ +| .+.++++|++|++++|++++ +|.
T Consensus 101 n~l~~lp~~---~~~L~~L~l~~n~l~~-l~~~---~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~ 170 (454)
T 1jl5_A 101 NSLTELPEL---PQSLKSLLVDNNNLKA-LSDL---PPLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPD 170 (454)
T ss_dssp SCCSSCCCC---CTTCCEEECCSSCCSC-CCSC---CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCC
T ss_pred CcCCccccc---cCCCcEEECCCCccCc-ccCC---CCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCC
Confidence 556666643 3677888888888774 3321 2688888888888885 67 58888888888888888884 555
Q ss_pred cccCcccccccccccccCCCCCCCCCCCCCccccc
Q 011005 82 EITKLSRLDYLNLSSNKLSGPVPFSNNDLSSMHTV 116 (496)
Q Consensus 82 ~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~l~~~ 116 (496)
.+ .+|+.|++++|.+++ +| .+..+++|+.+
T Consensus 171 ~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L 200 (454)
T 1jl5_A 171 LP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAI 200 (454)
T ss_dssp CC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEE
T ss_pred Cc---ccccEEECcCCcCCc-Cc-cccCCCCCCEE
Confidence 43 488888888888886 45 57788887654
No 393
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=98.78 E-value=4.3e-10 Score=109.93 Aligned_cols=104 Identities=26% Similarity=0.285 Sum_probs=83.6
Q ss_pred CCccccCC-----hhccCCC-CCCEEeccCCccCCCCCccCCCC-----CCCCEEeccCCcCCCCCchhhcC----C-cc
Q 011005 1 MYKIGIIP-----PEIGNLK-NLIKLDVGSNSLIGPIPSALGSL-----TNLSNLDLSSNKLSGKIPPEIAS----M-KY 64 (496)
Q Consensus 1 ~n~~~~lp-----~~~~~l~-~L~~L~l~~n~i~~~~p~~~~~l-----~~L~~l~l~~n~l~~~~p~~~~~----l-~~ 64 (496)
.|+++.++ ..+.+++ +|++|+|++|.|++..+..+..+ ++|++|+|++|+|++..+..+.. + ++
T Consensus 31 ~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~ 110 (362)
T 3goz_A 31 LNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELVKTLAAIPFT 110 (362)
T ss_dssp TSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred CCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHHHHHHHhCCCC
Confidence 46777777 5677888 89999999999998777777775 99999999999999777665444 4 89
Q ss_pred cCeecccccccCCCCCcccc----C-cccccccccccccCCCCCC
Q 011005 65 LTQLDLSNNNIQGSIPGEIT----K-LSRLDYLNLSSNKLSGPVP 104 (496)
Q Consensus 65 L~~l~l~~N~l~~~~~~~~~----~-l~~L~~l~l~~n~l~~~~~ 104 (496)
|+.|+|++|++++..+..+. . .++|+.|++++|.+++...
T Consensus 111 L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~ 155 (362)
T 3goz_A 111 ITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSS 155 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCH
T ss_pred ccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHH
Confidence 99999999999866555443 3 3699999999999985443
No 394
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=98.74 E-value=7.7e-09 Score=99.54 Aligned_cols=102 Identities=15% Similarity=0.134 Sum_probs=92.0
Q ss_pred CCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccC-eecccccccCCCCCccccCccccccc
Q 011005 14 LKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLT-QLDLSNNNIQGSIPGEITKLSRLDYL 92 (496)
Q Consensus 14 l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~-~l~l~~N~l~~~~~~~~~~l~~L~~l 92 (496)
+++|+.|+|++|+++.+.+..|.++++|+.|+|++| ++.+-+..|.+|++|+ .++|.+ .++...+..|.+|++|+.|
T Consensus 225 ~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l 302 (329)
T 3sb4_A 225 MPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYV 302 (329)
T ss_dssp CTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEE
T ss_pred cCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEE
Confidence 789999999999999777788999999999999998 7756667899999999 999999 7775667899999999999
Q ss_pred ccccccCCCCCCCCCCCCCcccccc
Q 011005 93 NLSSNKLSGPVPFSNNDLSSMHTVV 117 (496)
Q Consensus 93 ~l~~n~l~~~~~~~~~~l~~l~~~~ 117 (496)
++++|.++...+..|.++++|+.+.
T Consensus 303 ~l~~n~i~~I~~~aF~~~~~L~~ly 327 (329)
T 3sb4_A 303 LATGDKITTLGDELFGNGVPSKLIY 327 (329)
T ss_dssp EECSSCCCEECTTTTCTTCCCCEEE
T ss_pred EeCCCccCccchhhhcCCcchhhhc
Confidence 9999999989999999999997653
No 395
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.72 E-value=8.5e-08 Score=91.78 Aligned_cols=137 Identities=18% Similarity=0.200 Sum_probs=100.4
Q ss_pred CCCCcceeeecCCeeEEEEEeCCCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcc--c--ccccccceeecCCeEEEEE
Q 011005 206 DFDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLH--R--NIVKLYGYCLHKKCMFLIY 281 (496)
Q Consensus 206 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h--~--niv~~~~~~~~~~~~~lV~ 281 (496)
.....+.++.|....||+. ++.+++|...... ....+.+|..+++.+.+ . .+.+++++ +..++||
T Consensus 38 ~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~~~---~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvm 106 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC----NEQYVVKVPKRDS---VRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIM 106 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE----TTTEEEEEESSHH---HHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEE
T ss_pred ceEEEEeCCCCCCceEEEE----CCEEEEEeCCcHH---HHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEE
Confidence 5556778999999999998 6678888765433 12457899999999965 1 23444444 4467999
Q ss_pred EecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCC------------------------------------
Q 011005 282 EYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDC------------------------------------ 325 (496)
Q Consensus 282 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~------------------------------------ 325 (496)
||++|.++...... .++..+...++.+++..+..||+..
T Consensus 107 e~i~G~~l~~~~~~-----~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (320)
T 3r70_A 107 KYIKGERITYEQYH-----KLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLL 181 (320)
T ss_dssp ECCCCBCCCHHHHT-----TSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCC
T ss_pred eecCCccccccccc-----cCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhcccc
Confidence 99999888643321 3566667778888888888888532
Q ss_pred ------------------------CCCeEEeCCCCCceEecCCCCeEEccccccccc
Q 011005 326 ------------------------SPSIIHRDISSNNILLNSKLEAFVADFGTARLL 358 (496)
Q Consensus 326 ------------------------~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 358 (496)
...++|+|++|.||+++++..+.++||+.+...
T Consensus 182 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~ 238 (320)
T 3r70_A 182 TDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVG 238 (320)
T ss_dssp CHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEE
T ss_pred cccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccC
Confidence 123599999999999999766799999998643
No 396
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=98.64 E-value=2.3e-10 Score=115.71 Aligned_cols=88 Identities=17% Similarity=0.146 Sum_probs=40.5
Q ss_pred CCCCCCEEeccCCccCCC----CCccCCCCCCCCEEeccCCcCCCCCchhhcC-----CcccCeecccccccCCC----C
Q 011005 13 NLKNLIKLDVGSNSLIGP----IPSALGSLTNLSNLDLSSNKLSGKIPPEIAS-----MKYLTQLDLSNNNIQGS----I 79 (496)
Q Consensus 13 ~l~~L~~L~l~~n~i~~~----~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~-----l~~L~~l~l~~N~l~~~----~ 79 (496)
.+++|+.|+|++|+++.. ++..+..+++|+.|+|++|.+++..+..+.. .++|+.|+|++|.+++. +
T Consensus 254 ~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l 333 (461)
T 1z7x_W 254 PSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHF 333 (461)
T ss_dssp TTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHH
T ss_pred CCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHH
Confidence 355555555555555532 3444444555555555555554322222221 13455555555544422 2
Q ss_pred CccccCcccccccccccccCC
Q 011005 80 PGEITKLSRLDYLNLSSNKLS 100 (496)
Q Consensus 80 ~~~~~~l~~L~~l~l~~n~l~ 100 (496)
+..+..+++|+.|++++|.++
T Consensus 334 ~~~l~~~~~L~~L~Ls~n~i~ 354 (461)
T 1z7x_W 334 SSVLAQNRFLLELQISNNRLE 354 (461)
T ss_dssp HHHHHHCSSCCEEECCSSBCH
T ss_pred HHHHhhCCCccEEEccCCccc
Confidence 333334444455555544444
No 397
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.63 E-value=1.6e-09 Score=99.80 Aligned_cols=103 Identities=21% Similarity=0.304 Sum_probs=71.4
Q ss_pred ccCCCCCCE--EeccCCccCCCCCc----cCCCCCCCCEEeccCCcCCC--CCchhhcCCcccCeecccccccCCCCCcc
Q 011005 11 IGNLKNLIK--LDVGSNSLIGPIPS----ALGSLTNLSNLDLSSNKLSG--KIPPEIASMKYLTQLDLSNNNIQGSIPGE 82 (496)
Q Consensus 11 ~~~l~~L~~--L~l~~n~i~~~~p~----~~~~l~~L~~l~l~~n~l~~--~~p~~~~~l~~L~~l~l~~N~l~~~~~~~ 82 (496)
+...+.|+. ++++.|... .++. ...++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..
T Consensus 137 l~~dp~L~~~~l~l~~N~~~-~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~ 213 (267)
T 3rw6_A 137 LRSDPDLVAQNIDVVLNRRS-CMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RE 213 (267)
T ss_dssp GGGCHHHHHTTCCCCTTSHH-HHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GG
T ss_pred cCCCcchhhcCccccCCHHH-HHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hh
Confidence 333444554 667777443 2222 22468899999999999996 3456778899999999999999854 33
Q ss_pred ccCcc--cccccccccccCCCCCCC-------CCCCCCccccc
Q 011005 83 ITKLS--RLDYLNLSSNKLSGPVPF-------SNNDLSSMHTV 116 (496)
Q Consensus 83 ~~~l~--~L~~l~l~~n~l~~~~~~-------~~~~l~~l~~~ 116 (496)
+..++ +|+.|+|++|++++..|. .+..+++|..|
T Consensus 214 l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~il~~~P~L~~L 256 (267)
T 3rw6_A 214 LDKIKGLKLEELWLDGNSLCDTFRDQSTYISAIRERFPKLLRL 256 (267)
T ss_dssp GGGGTTSCCSEEECTTSTTGGGCSSHHHHHHHHHHHCTTCCEE
T ss_pred hhhcccCCcceEEccCCcCccccCcchhHHHHHHHHCcccCeE
Confidence 44444 899999999999876653 24555666443
No 398
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=98.60 E-value=4.7e-08 Score=93.96 Aligned_cols=52 Identities=19% Similarity=0.100 Sum_probs=35.3
Q ss_pred CcccCeecccccccCCCCCccccCcccccccccccccCCCCCCCCCCCCCccc
Q 011005 62 MKYLTQLDLSNNNIQGSIPGEITKLSRLDYLNLSSNKLSGPVPFSNNDLSSMH 114 (496)
Q Consensus 62 l~~L~~l~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~l~ 114 (496)
+++|+.|+|++|+++...+..|.++.+|+.|++.+| ++...+.+|.++++|+
T Consensus 225 ~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~ 276 (329)
T 3sb4_A 225 MPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLA 276 (329)
T ss_dssp CTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCC
T ss_pred cCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhcc
Confidence 566777777777776444556777777777777776 6666666777777665
No 399
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.59 E-value=1.3e-08 Score=93.68 Aligned_cols=80 Identities=26% Similarity=0.379 Sum_probs=65.7
Q ss_pred cCCCCCCEEeccCCccCCC--CCccCCCCCCCCEEeccCCcCCCCCchhhcCCc--ccCeecccccccCCCCCc------
Q 011005 12 GNLKNLIKLDVGSNSLIGP--IPSALGSLTNLSNLDLSSNKLSGKIPPEIASMK--YLTQLDLSNNNIQGSIPG------ 81 (496)
Q Consensus 12 ~~l~~L~~L~l~~n~i~~~--~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~--~L~~l~l~~N~l~~~~~~------ 81 (496)
.++++|+.|+|++|+|++. +|+.+..+++|+.|+|++|+|++. ..+..+. +|+.|+|++|.+++.+|.
T Consensus 167 ~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~ 244 (267)
T 3rw6_A 167 ENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYIS 244 (267)
T ss_dssp HHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHH
T ss_pred hhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHHH
Confidence 4689999999999999973 456677899999999999999964 4455555 999999999999876663
Q ss_pred -cccCcccccccc
Q 011005 82 -EITKLSRLDYLN 93 (496)
Q Consensus 82 -~~~~l~~L~~l~ 93 (496)
.+..+++|+.||
T Consensus 245 ~il~~~P~L~~LD 257 (267)
T 3rw6_A 245 AIRERFPKLLRLD 257 (267)
T ss_dssp HHHHHCTTCCEES
T ss_pred HHHHHCcccCeEC
Confidence 367788888776
No 400
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=98.50 E-value=2e-09 Score=108.66 Aligned_cols=87 Identities=23% Similarity=0.210 Sum_probs=45.5
Q ss_pred CCCCCEEeccCCccCCC----CCccCCCCCCCCEEeccCCcCCCCC-----chhhcCCcccCeecccccccCCC----CC
Q 011005 14 LKNLIKLDVGSNSLIGP----IPSALGSLTNLSNLDLSSNKLSGKI-----PPEIASMKYLTQLDLSNNNIQGS----IP 80 (496)
Q Consensus 14 l~~L~~L~l~~n~i~~~----~p~~~~~l~~L~~l~l~~n~l~~~~-----p~~~~~l~~L~~l~l~~N~l~~~----~~ 80 (496)
+++|+.|+|++|.++.. ++..+..+++|+.|+|++|.+++.. +..+..+++|+.|+|++|++++. ++
T Consensus 198 ~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~ 277 (461)
T 1z7x_W 198 PCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLC 277 (461)
T ss_dssp CCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHH
T ss_pred CCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHH
Confidence 44566666666665532 3444555566666666666555321 11122355566666666655522 34
Q ss_pred ccccCcccccccccccccCC
Q 011005 81 GEITKLSRLDYLNLSSNKLS 100 (496)
Q Consensus 81 ~~~~~l~~L~~l~l~~n~l~ 100 (496)
..+..+++|+.|++++|.++
T Consensus 278 ~~l~~~~~L~~L~Ls~n~i~ 297 (461)
T 1z7x_W 278 RVLRAKESLKELSLAGNELG 297 (461)
T ss_dssp HHHHHCTTCCEEECTTCCCH
T ss_pred HHHhhCCCcceEECCCCCCc
Confidence 44555556666666666554
No 401
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.50 E-value=9.6e-07 Score=83.79 Aligned_cols=136 Identities=18% Similarity=0.153 Sum_probs=93.3
Q ss_pred cceeeecCCeeEEEEEeCCCcEEEEEEcccchhHHHHHHHHHHHHHHHhhccc---ccccccceee-cCCeEEEEEEecC
Q 011005 210 RYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHR---NIVKLYGYCL-HKKCMFLIYEYME 285 (496)
Q Consensus 210 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~---niv~~~~~~~-~~~~~~lV~e~~~ 285 (496)
.+.++.|....||+. +..+++|+.... .....+.+|+.+++.+.+. .+.+.+.++. ..+..++|||+++
T Consensus 24 v~~l~~G~~n~v~~v----g~~~VlR~~~~~---~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~ 96 (306)
T 3tdw_A 24 VESLGEGFRNYAILV----NGDWVFRFPKSQ---QGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQ 96 (306)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEESSH---HHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCC
T ss_pred eeecCCCcceeEEEE----CCEEEEEecCCc---hHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccC
Confidence 356888888899998 566788885332 2346788999999999742 3556666664 3456789999999
Q ss_pred CCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhC-----------------------------------------
Q 011005 286 RGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHD----------------------------------------- 324 (496)
Q Consensus 286 ~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~----------------------------------------- 324 (496)
|.++...... .++..+...++.++...|..||+.
T Consensus 97 G~~l~~~~~~-----~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~ 171 (306)
T 3tdw_A 97 GQILGEDGMA-----VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDY 171 (306)
T ss_dssp SEECHHHHHT-----TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHH
T ss_pred CeECchhhhh-----hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHH
Confidence 9888653221 234444445555555555555532
Q ss_pred ----------------CCCCeEEeCCCCCceEecC---CCC-eEEcccccccc
Q 011005 325 ----------------CSPSIIHRDISSNNILLNS---KLE-AFVADFGTARL 357 (496)
Q Consensus 325 ----------------~~~~i~H~dlkp~Nil~~~---~~~-~kl~Dfg~~~~ 357 (496)
....++|+|++|.||+++. ++. +.|+||+.+..
T Consensus 172 l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 172 LTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 1345799999999999997 455 47999998854
No 402
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.49 E-value=9.1e-07 Score=82.32 Aligned_cols=134 Identities=19% Similarity=0.170 Sum_probs=97.2
Q ss_pred eeeecCCe-eEEEEEeC-CCcEEEEEEcccchhHHHHHHHHHHHHHHHhhc-ccccccccceeecCCeEEEEEEecCCCC
Q 011005 212 CIGTGGYG-SVYKAQLP-NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVL-HRNIVKLYGYCLHKKCMFLIYEYMERGS 288 (496)
Q Consensus 212 ~lg~G~~g-~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lV~e~~~~g~ 288 (496)
.+..|..| .||+.... ++..+++|.-.... ...+.+|...++.+. +--+.++++++.+.+..++|||+++|.+
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~~----~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~ 106 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGSV----ANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKT 106 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEETHH----HHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEE
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCCCC----HhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCcc
Confidence 45556655 69998765 46678889865432 356788999998885 3346788888888899999999999988
Q ss_pred hhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCC-------------------------------------------
Q 011005 289 LFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDC------------------------------------------- 325 (496)
Q Consensus 289 L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~------------------------------------------- 325 (496)
+.+..... ......+..+++..|..||...
T Consensus 107 ~~~~~~~~-------~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (272)
T 4gkh_A 107 AFQVLEEY-------PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQV 179 (272)
T ss_dssp HHHHHHHC-------GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHH
T ss_pred ccccccCC-------HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHH
Confidence 77654421 1223346667777777777510
Q ss_pred ------------CCCeEEeCCCCCceEecCCCCeEEccccccc
Q 011005 326 ------------SPSIIHRDISSNNILLNSKLEAFVADFGTAR 356 (496)
Q Consensus 326 ------------~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~ 356 (496)
...++|+|+.+.||++++++.+-|+||+.+.
T Consensus 180 ~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~ 222 (272)
T 4gkh_A 180 WKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVG 222 (272)
T ss_dssp HHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred HHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECcccc
Confidence 1238999999999999988777799999874
No 403
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.39 E-value=1.2e-06 Score=82.12 Aligned_cols=75 Identities=19% Similarity=0.191 Sum_probs=58.2
Q ss_pred cceeeecCCeeEEEEEeCCCcEEEEEEcccchhHHHHHHHHHHHHHHHhhccc---ccccccceeecCCeEEEEEEecCC
Q 011005 210 RYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHR---NIVKLYGYCLHKKCMFLIYEYMER 286 (496)
Q Consensus 210 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~---niv~~~~~~~~~~~~~lV~e~~~~ 286 (496)
.+.|+.|.++.||++...+|+.+++|+..... ......+.+|++.++.+.+. .+++++++. ..++||||++|
T Consensus 20 ~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~-~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~g 94 (288)
T 3d1u_A 20 VAERGHSHRWHLYRVELADGTPLFVKALPDDA-PALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDE 94 (288)
T ss_dssp EEEEEEETTEEEEEEEETTSCEEEEEECCTTC-CCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCC
T ss_pred eeeeCCcchhheEEEEeCCCCeEEEEecCCCC-cchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEeccc
Confidence 56799999999999998889999999965422 11124578999999999865 466777653 25899999999
Q ss_pred CCh
Q 011005 287 GSL 289 (496)
Q Consensus 287 g~L 289 (496)
+++
T Consensus 95 ~~~ 97 (288)
T 3d1u_A 95 RPP 97 (288)
T ss_dssp CCC
T ss_pred CCC
Confidence 875
No 404
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.39 E-value=2.1e-06 Score=83.46 Aligned_cols=75 Identities=11% Similarity=0.138 Sum_probs=56.6
Q ss_pred CcceeeecCCeeEEEEEeCCCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccc--cccccceeecC-CeEEEEEEecC
Q 011005 209 IRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRN--IVKLYGYCLHK-KCMFLIYEYME 285 (496)
Q Consensus 209 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~~~~~~~~~-~~~~lV~e~~~ 285 (496)
..+.++.|....+|+... +++.+++|...... .+.+|+.+++.+.... +.+++.++... +..++||||++
T Consensus 45 ~i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~~------~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l~ 117 (362)
T 3ovc_A 45 DLMQLSEGEESRAFSFDV-GGRGYVLRVNSCAD------GFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQ 117 (362)
T ss_dssp EEEEEEECSSEEEEEEEE-TTEEEEEEEESCCH------HHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECCC
T ss_pred eEEECCCCCcceEEEEEE-CCcEEEEEeCCchh------hHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEecC
Confidence 356688999999999986 57889999875432 4778999999986433 45667666654 56899999999
Q ss_pred CCChh
Q 011005 286 RGSLF 290 (496)
Q Consensus 286 ~g~L~ 290 (496)
|.++.
T Consensus 118 G~~l~ 122 (362)
T 3ovc_A 118 GVTLQ 122 (362)
T ss_dssp SEETT
T ss_pred CCCcc
Confidence 86654
No 405
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=98.26 E-value=1.1e-08 Score=99.99 Aligned_cols=88 Identities=22% Similarity=0.250 Sum_probs=48.6
Q ss_pred CCCCCEEeccCCccCCCCCccC-----CCCCCCCEEeccCCcCCC----CCchhhcCCcccCeecccccccCCC----CC
Q 011005 14 LKNLIKLDVGSNSLIGPIPSAL-----GSLTNLSNLDLSSNKLSG----KIPPEIASMKYLTQLDLSNNNIQGS----IP 80 (496)
Q Consensus 14 l~~L~~L~l~~n~i~~~~p~~~-----~~l~~L~~l~l~~n~l~~----~~p~~~~~l~~L~~l~l~~N~l~~~----~~ 80 (496)
+++|+.|+|++|+|+......+ ...++|+.|+|++|.|+. .++..+..+++|++|+|++|+|+.. ++
T Consensus 125 L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~ 204 (372)
T 3un9_A 125 FLRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLA 204 (372)
T ss_dssp HHTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHH
T ss_pred HHhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHH
Confidence 4456666666666543222222 234566666666666653 1333445566667777777666521 23
Q ss_pred ccccCcccccccccccccCCC
Q 011005 81 GEITKLSRLDYLNLSSNKLSG 101 (496)
Q Consensus 81 ~~~~~l~~L~~l~l~~n~l~~ 101 (496)
..+..+++|+.|+|++|.|+.
T Consensus 205 ~~L~~~~~L~~L~Ls~N~i~~ 225 (372)
T 3un9_A 205 AQLDRNRQLQELNVAYNGAGD 225 (372)
T ss_dssp HHGGGCSCCCEEECCSSCCCH
T ss_pred HHHhcCCCcCeEECCCCCCCH
Confidence 445555666777777776653
No 406
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.25 E-value=1.9e-06 Score=83.74 Aligned_cols=81 Identities=10% Similarity=0.002 Sum_probs=55.6
Q ss_pred cee-eecCCeeEEEEEeC-------CCcEEEEEEcccchh--HHHHHHHHHHHHHHHhhc-c--cccccccceeecC---
Q 011005 211 YCI-GTGGYGSVYKAQLP-------NGKVFALKKLHTSEE--LAFIKSFKNEAQVLSQVL-H--RNIVKLYGYCLHK--- 274 (496)
Q Consensus 211 ~~l-g~G~~g~Vy~~~~~-------~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~-h--~niv~~~~~~~~~--- 274 (496)
+.| +.|....+|+.... +++.+++|....... ......+.+|+.+++.+. + -.+.+++.++...
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~ 105 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVL 105 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTT
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCcc
Confidence 457 78888999998764 267888988654321 000134678999999885 3 2466778777655
Q ss_pred CeEEEEEEecCCCChhh
Q 011005 275 KCMFLIYEYMERGSLFC 291 (496)
Q Consensus 275 ~~~~lV~e~~~~g~L~~ 291 (496)
+..++|||+++|..+.+
T Consensus 106 g~~~~v~e~l~G~~l~~ 122 (357)
T 3ats_A 106 GTPFFLMDYVEGVVPPD 122 (357)
T ss_dssp SSCEEEEECCCCBCCCB
T ss_pred CCceEEEEecCCCChhh
Confidence 35689999999877653
No 407
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=98.19 E-value=2.1e-06 Score=84.63 Aligned_cols=115 Identities=10% Similarity=0.111 Sum_probs=86.0
Q ss_pred ccccCCh-hccCCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCC-----CCCchhhcCCcccCeecccccccC
Q 011005 3 KIGIIPP-EIGNLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLS-----GKIPPEIASMKYLTQLDLSNNNIQ 76 (496)
Q Consensus 3 ~~~~lp~-~~~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~-----~~~p~~~~~l~~L~~l~l~~N~l~ 76 (496)
.+..|+. .|.+ .+|+.+.|. |+++.+.+..|.++++|+.++|.+|.+. ..-+..|.+|++|+.++|. |.++
T Consensus 236 ~l~~I~~~aF~~-~~L~~i~lp-~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~ 312 (401)
T 4fdw_A 236 NVSTIGQEAFRE-SGITTVKLP-NGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIR 312 (401)
T ss_dssp TCCEECTTTTTT-CCCSEEEEE-TTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCC
T ss_pred CccCcccccccc-CCccEEEeC-CCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceE
Confidence 3555666 5556 789999994 5566566788999999999999888765 3445678889999999998 4476
Q ss_pred CCCCccccCcccccccccccccCCCCCCCCCCCCCccccccccCCC
Q 011005 77 GSIPGEITKLSRLDYLNLSSNKLSGPVPFSNNDLSSMHTVVSLSPN 122 (496)
Q Consensus 77 ~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~l~~~~~~~~n 122 (496)
..-...|.+|.+|+.+.+.+| ++...+.+|.++ +|+.+....++
T Consensus 313 ~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~ 356 (401)
T 4fdw_A 313 ILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTT 356 (401)
T ss_dssp EECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSS
T ss_pred EEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCC
Confidence 455678888999999999655 776778888888 88776544333
No 408
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=98.18 E-value=6e-06 Score=79.52 Aligned_cols=139 Identities=20% Similarity=0.343 Sum_probs=80.5
Q ss_pred eeeecCCeeEEEEEeCCCcEEEEEEcccchhHHHHHHHHHHHHHHHhhccc--ccccccc------eeecCCeEEEEEEe
Q 011005 212 CIGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHR--NIVKLYG------YCLHKKCMFLIYEY 283 (496)
Q Consensus 212 ~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~--niv~~~~------~~~~~~~~~lV~e~ 283 (496)
.|+.|..+.||+....+| .+++|...... ..+..|..+++.+... .+.+++. +....+..++||+|
T Consensus 39 ~l~gG~~n~~~~v~~~~~-~~vlk~~~~~~-----~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~ 112 (346)
T 2q83_A 39 VIQGNQMALVWKVHTDSG-AVCLKRIHRPE-----KKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDW 112 (346)
T ss_dssp ECC----CEEEEEEETTE-EEEEEEECSCH-----HHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEEC
T ss_pred eccccccCcEEEEEeCCC-CEEEEecCCCH-----HHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEe
Confidence 455677899999987655 48899887632 2334566666666422 2344443 12345678999999
Q ss_pred cCCCChh--------------hhhhCC---C--C-C-----ccCCHHHH-------------------------------
Q 011005 284 MERGSLF--------------CNLHNN---E--D-A-----VELDWAKR------------------------------- 307 (496)
Q Consensus 284 ~~~g~L~--------------~~l~~~---~--~-~-----~~~~~~~~------------------------------- 307 (496)
++|..+. ..++.. . . . ....|...
T Consensus 113 i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 192 (346)
T 2q83_A 113 IEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEI 192 (346)
T ss_dssp CCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHH
T ss_pred ecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHH
Confidence 9986542 011110 0 0 0 00122110
Q ss_pred HHHHHHHHHHHHHHHh----------CCCCCeEEeCCCCCceEecCCCCeEEccccccc
Q 011005 308 VNIVKAMAHALAYLHH----------DCSPSIIHRDISSNNILLNSKLEAFVADFGTAR 356 (496)
Q Consensus 308 ~~i~~~i~~~l~~lh~----------~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~ 356 (496)
..+..++..++.+|+. .....++|+|+.+.||+++.++.+.++||+.+.
T Consensus 193 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 193 DGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp HHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 0111223345566652 015789999999999999888889999999774
No 409
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=98.17 E-value=9.7e-08 Score=93.21 Aligned_cols=90 Identities=19% Similarity=0.307 Sum_probs=72.6
Q ss_pred CCCCCCEEeccCCccCC----CCCccCCCCCCCCEEeccCCcCCCC----CchhhcCCcccCeecccccccCCC----CC
Q 011005 13 NLKNLIKLDVGSNSLIG----PIPSALGSLTNLSNLDLSSNKLSGK----IPPEIASMKYLTQLDLSNNNIQGS----IP 80 (496)
Q Consensus 13 ~l~~L~~L~l~~n~i~~----~~p~~~~~l~~L~~l~l~~n~l~~~----~p~~~~~l~~L~~l~l~~N~l~~~----~~ 80 (496)
..++|+.|+|++|.|+. .++..+..+++|++|+|++|.|++. ++..+..+++|+.|+|++|.|+.. ++
T Consensus 153 ~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~ 232 (372)
T 3un9_A 153 DQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALA 232 (372)
T ss_dssp TTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHH
T ss_pred cCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHH
Confidence 46789999999999974 2444557889999999999999842 356677889999999999999742 33
Q ss_pred ccccCcccccccccccccCCCC
Q 011005 81 GEITKLSRLDYLNLSSNKLSGP 102 (496)
Q Consensus 81 ~~~~~l~~L~~l~l~~n~l~~~ 102 (496)
..+..+++|+.|+|++|.|++.
T Consensus 233 ~~L~~~~~L~~L~Ls~N~i~~~ 254 (372)
T 3un9_A 233 RAAREHPSLELLHLYFNELSSE 254 (372)
T ss_dssp HHHHHCSSCCEEECTTSSCCHH
T ss_pred HHHHhCCCCCEEeccCCCCCHH
Confidence 4555678999999999999854
No 410
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=98.13 E-value=2.3e-07 Score=96.63 Aligned_cols=92 Identities=20% Similarity=0.124 Sum_probs=66.5
Q ss_pred ccCCCCCCEEeccCCc--cCCCCCccCC-CCCCCCEEeccCCcCCC-CCchhhcCCcccCeecccccccCCC-CCccccC
Q 011005 11 IGNLKNLIKLDVGSNS--LIGPIPSALG-SLTNLSNLDLSSNKLSG-KIPPEIASMKYLTQLDLSNNNIQGS-IPGEITK 85 (496)
Q Consensus 11 ~~~l~~L~~L~l~~n~--i~~~~p~~~~-~l~~L~~l~l~~n~l~~-~~p~~~~~l~~L~~l~l~~N~l~~~-~~~~~~~ 85 (496)
+.++++|+.|+|++|. +++..+..+. .+++|++|+|++|++++ .++..+..+++|+.|+|++|.+++. ++..+..
T Consensus 432 ~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~ 511 (592)
T 3ogk_B 432 LIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTK 511 (592)
T ss_dssp HHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHH
T ss_pred HHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHh
Confidence 5567888888886433 4443333333 47889999999999875 3455567889999999999998643 3444567
Q ss_pred cccccccccccccCCCC
Q 011005 86 LSRLDYLNLSSNKLSGP 102 (496)
Q Consensus 86 l~~L~~l~l~~n~l~~~ 102 (496)
+++|+.|++++|+++..
T Consensus 512 l~~L~~L~ls~n~it~~ 528 (592)
T 3ogk_B 512 LPSLRYLWVQGYRASMT 528 (592)
T ss_dssp CSSCCEEEEESCBCCTT
T ss_pred cCccCeeECcCCcCCHH
Confidence 88999999999998855
No 411
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.06 E-value=4.4e-07 Score=79.22 Aligned_cols=92 Identities=16% Similarity=0.199 Sum_probs=73.5
Q ss_pred hccCCCCCCEEeccCC-ccCC----CCCccCCCCCCCCEEeccCCcCCCC----CchhhcCCcccCeecccccccCCC--
Q 011005 10 EIGNLKNLIKLDVGSN-SLIG----PIPSALGSLTNLSNLDLSSNKLSGK----IPPEIASMKYLTQLDLSNNNIQGS-- 78 (496)
Q Consensus 10 ~~~~l~~L~~L~l~~n-~i~~----~~p~~~~~l~~L~~l~l~~n~l~~~----~p~~~~~l~~L~~l~l~~N~l~~~-- 78 (496)
.+...++|++|+|++| .|.. .+...+...++|++|+|++|+|... +...+...++|++|+|++|.|...
T Consensus 31 ~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~ 110 (185)
T 1io0_A 31 IQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGI 110 (185)
T ss_dssp HHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHH
T ss_pred HHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHH
Confidence 4567889999999999 8863 2345667789999999999999742 344566678999999999999742
Q ss_pred --CCccccCccccccccc--ccccCCC
Q 011005 79 --IPGEITKLSRLDYLNL--SSNKLSG 101 (496)
Q Consensus 79 --~~~~~~~l~~L~~l~l--~~n~l~~ 101 (496)
+...+...++|+.|+| ++|.|..
T Consensus 111 ~~l~~~L~~n~~L~~L~L~~~~N~i~~ 137 (185)
T 1io0_A 111 LALVEALQSNTSLIELRIDNQSQPLGN 137 (185)
T ss_dssp HHHHHGGGGCSSCCEEECCCCSSCCCH
T ss_pred HHHHHHHHhCCCceEEEecCCCCCCCH
Confidence 4556778889999999 8899974
No 412
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=97.98 E-value=9.1e-06 Score=80.00 Aligned_cols=113 Identities=8% Similarity=0.031 Sum_probs=90.5
Q ss_pred CccccCCh-hccCCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccC----
Q 011005 2 YKIGIIPP-EIGNLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQ---- 76 (496)
Q Consensus 2 n~~~~lp~-~~~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~---- 76 (496)
+.+..|+. .|.++++|+.|+|..| ++.+...+|.+ .+|+.+.|. |.++..-+..|.+|++|+.+++.+|.+.
T Consensus 212 ~~l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~lp-~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~ 288 (401)
T 4fdw_A 212 VTLKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKLP-NGVTNIASRAFYYCPELAEVTTYGSTFNDDPE 288 (401)
T ss_dssp TTCCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEEE-TTCCEECTTTTTTCTTCCEEEEESSCCCCCTT
T ss_pred CchheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEeC-CCccEEChhHhhCCCCCCEEEeCCccccCCcc
Confidence 34667777 7889999999999875 56566677877 789999994 5566455678999999999999998875
Q ss_pred -CCCCccccCcccccccccccccCCCCCCCCCCCCCccccccc
Q 011005 77 -GSIPGEITKLSRLDYLNLSSNKLSGPVPFSNNDLSSMHTVVS 118 (496)
Q Consensus 77 -~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~l~~~~~ 118 (496)
...+..|.+|++|+.+.+. |.++.....+|.++++|..+..
T Consensus 289 ~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~l 330 (401)
T 4fdw_A 289 AMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTI 330 (401)
T ss_dssp CEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEE
T ss_pred cEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEE
Confidence 3456789999999999999 5588788889999999876643
No 413
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.97 E-value=2.2e-05 Score=77.34 Aligned_cols=76 Identities=12% Similarity=0.103 Sum_probs=48.5
Q ss_pred cceeeecCCeeEEEEEeC-CCcEEEEEEcccchh---H---HHHHHHHHHHHHHHhhcc--cc-cccccceeecCCeEEE
Q 011005 210 RYCIGTGGYGSVYKAQLP-NGKVFALKKLHTSEE---L---AFIKSFKNEAQVLSQVLH--RN-IVKLYGYCLHKKCMFL 279 (496)
Q Consensus 210 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~---~~~~~~~~e~~~l~~l~h--~n-iv~~~~~~~~~~~~~l 279 (496)
.+.+|.|..+.||++... +++.+++|....... . .....+..|.++++.+.. +. +.+++.+. .+..++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~d--~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSD--TEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEE--TTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEEc--CCccEE
Confidence 456899999999999764 468899997653211 0 112345778899988852 33 34555442 334579
Q ss_pred EEEecCCC
Q 011005 280 IYEYMERG 287 (496)
Q Consensus 280 V~e~~~~g 287 (496)
|||++++.
T Consensus 113 vmE~l~g~ 120 (397)
T 2olc_A 113 VMEDLSHL 120 (397)
T ss_dssp EECCCTTS
T ss_pred EEEeCCCc
Confidence 99999874
No 414
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=97.97 E-value=7.2e-07 Score=92.93 Aligned_cols=83 Identities=12% Similarity=0.139 Sum_probs=47.3
Q ss_pred CCCCCCEEeccCCccCCC----CCccCCCCCCCCEEeccCCcCCC----CCchhhcCCcccCeecccccccCCCCCcccc
Q 011005 13 NLKNLIKLDVGSNSLIGP----IPSALGSLTNLSNLDLSSNKLSG----KIPPEIASMKYLTQLDLSNNNIQGSIPGEIT 84 (496)
Q Consensus 13 ~l~~L~~L~l~~n~i~~~----~p~~~~~l~~L~~l~l~~n~l~~----~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~ 84 (496)
++++|++|+|++|.+++. ++..+..+++|+.|+|++|.+++ .++..+.++++|+.|+|++|.+. .+|..+.
T Consensus 162 ~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~-~l~~~~~ 240 (592)
T 3ogk_B 162 HCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEIL-ELVGFFK 240 (592)
T ss_dssp HCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGG-GGHHHHH
T ss_pred hCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHH-HHHHHHh
Confidence 556666666666665543 22233455666666666666652 22333445666666666666665 3555556
Q ss_pred Cccccccccccc
Q 011005 85 KLSRLDYLNLSS 96 (496)
Q Consensus 85 ~l~~L~~l~l~~ 96 (496)
.+++|+.|++++
T Consensus 241 ~~~~L~~L~l~~ 252 (592)
T 3ogk_B 241 AAANLEEFCGGS 252 (592)
T ss_dssp HCTTCCEEEECB
T ss_pred hhhHHHhhcccc
Confidence 666666666654
No 415
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=97.97 E-value=2.6e-07 Score=80.72 Aligned_cols=94 Identities=16% Similarity=0.205 Sum_probs=73.4
Q ss_pred CChhccCCCCCCEEeccCCccCCC----CCccCCCCCCCCEEeccCCcCCCC----CchhhcCCcccCeecc--cccccC
Q 011005 7 IPPEIGNLKNLIKLDVGSNSLIGP----IPSALGSLTNLSNLDLSSNKLSGK----IPPEIASMKYLTQLDL--SNNNIQ 76 (496)
Q Consensus 7 lp~~~~~l~~L~~L~l~~n~i~~~----~p~~~~~l~~L~~l~l~~n~l~~~----~p~~~~~l~~L~~l~l--~~N~l~ 76 (496)
+...+...++|++|+|++|.|... +...+...++|++|+|++|.|++. +...+...++|++|+| ++|.|.
T Consensus 57 l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~ 136 (185)
T 1io0_A 57 CAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLG 136 (185)
T ss_dssp HHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCC
T ss_pred HHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHHHHHHHhCCCceEEEecCCCCCCC
Confidence 334566778999999999999742 344556678999999999999843 4566778889999999 889997
Q ss_pred CC----CCccccCcccccccccccccCC
Q 011005 77 GS----IPGEITKLSRLDYLNLSSNKLS 100 (496)
Q Consensus 77 ~~----~~~~~~~l~~L~~l~l~~n~l~ 100 (496)
.. +...+...++|+.|+|++|.+.
T Consensus 137 ~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 137 NNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 43 3345566689999999999885
No 416
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.95 E-value=1.1e-06 Score=74.92 Aligned_cols=92 Identities=11% Similarity=0.172 Sum_probs=64.4
Q ss_pred CChhccCCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCc-CCCCCchhhcCC----cccCeecccccc-cCCCCC
Q 011005 7 IPPEIGNLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNK-LSGKIPPEIASM----KYLTQLDLSNNN-IQGSIP 80 (496)
Q Consensus 7 lp~~~~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~-l~~~~p~~~~~l----~~L~~l~l~~N~-l~~~~~ 80 (496)
+|.....--+|+.|||+++.|+..--..+..+++|+.|+|++|. |++.--..+..+ ++|++|+|++|. |+..--
T Consensus 53 LP~~~~~~~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl 132 (176)
T 3e4g_A 53 LPTGPLDKYKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGI 132 (176)
T ss_dssp SCCCSTTCCCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHH
T ss_pred CCcccCCCceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHH
Confidence 45433222368999999998875544567889999999999985 764322345554 479999998874 764323
Q ss_pred ccccCccccccccccccc
Q 011005 81 GEITKLSRLDYLNLSSNK 98 (496)
Q Consensus 81 ~~~~~l~~L~~l~l~~n~ 98 (496)
..+..+++|+.|++++++
T Consensus 133 ~~L~~~~~L~~L~L~~c~ 150 (176)
T 3e4g_A 133 IALHHFRNLKYLFLSDLP 150 (176)
T ss_dssp HHGGGCTTCCEEEEESCT
T ss_pred HHHhcCCCCCEEECCCCC
Confidence 456778899999998875
No 417
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.89 E-value=0.00013 Score=68.97 Aligned_cols=138 Identities=20% Similarity=0.247 Sum_probs=91.6
Q ss_pred cceeeecCCeeEEEEEeCCCcEEEEEEcccchhHHHHHHHHHHHHHHHhhc---ccccccccceeecCCeEEEEEEecCC
Q 011005 210 RYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVL---HRNIVKLYGYCLHKKCMFLIYEYMER 286 (496)
Q Consensus 210 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~~~~~~~~~~~~~lV~e~~~~ 286 (496)
.+.|+.|....+|+... ++..+++|...... ...+..|+..++.+. ...+++++.++...+..++||||++|
T Consensus 41 ~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~~----~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G 115 (312)
T 3jr1_A 41 KEKLYSGEMNEIWLIND-EVQTVFVKINERSY----RSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNK 115 (312)
T ss_dssp EEEECCSSSSEEEEEES-SSCEEEEEEEEGGG----HHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCC
T ss_pred eEEeCCccceeeeEEEE-CCCeEEEEeCCccc----HHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccC
Confidence 45689999999999987 46788888875432 356788999999985 25678888888878889999999999
Q ss_pred CChhh-----------hhhCCCC--C-----------------ccCCHHHHH---HHH----------------HHHHHH
Q 011005 287 GSLFC-----------NLHNNED--A-----------------VELDWAKRV---NIV----------------KAMAHA 317 (496)
Q Consensus 287 g~L~~-----------~l~~~~~--~-----------------~~~~~~~~~---~i~----------------~~i~~~ 317 (496)
..+.. .++.... . ..-+|.+.. ++. .+++..
T Consensus 116 ~~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~~ 195 (312)
T 3jr1_A 116 SKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQI 195 (312)
T ss_dssp CCCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHHH
T ss_pred CCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHH
Confidence 76521 1222211 0 011344321 011 111212
Q ss_pred H-HHHHh-CCCCCeEEeCCCCCceEecCCCCeEEcccc
Q 011005 318 L-AYLHH-DCSPSIIHRDISSNNILLNSKLEAFVADFG 353 (496)
Q Consensus 318 l-~~lh~-~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg 353 (496)
+ ..|.. .....++|+|+.+.|++++.++ +.++|++
T Consensus 196 l~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 196 VADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 2 23421 1256899999999999999887 8899974
No 418
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=97.81 E-value=1.3e-06 Score=90.96 Aligned_cols=103 Identities=16% Similarity=0.170 Sum_probs=67.1
Q ss_pred CCCCCCEEecc--C----CccCCCC-----CccCCCCCCCCEEeccCCcCCCCCchhhcC-CcccCeecccccccCCCCC
Q 011005 13 NLKNLIKLDVG--S----NSLIGPI-----PSALGSLTNLSNLDLSSNKLSGKIPPEIAS-MKYLTQLDLSNNNIQGSIP 80 (496)
Q Consensus 13 ~l~~L~~L~l~--~----n~i~~~~-----p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~-l~~L~~l~l~~N~l~~~~~ 80 (496)
++++|+.|+|+ + |.++... +..+..+++|+.|+|++ .+++..+..+.. +++|+.|+|++|.+++..+
T Consensus 395 ~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~ 473 (594)
T 2p1m_B 395 NRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGM 473 (594)
T ss_dssp HCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHH
T ss_pred hCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHH
Confidence 57888888888 4 5555221 11256678888888876 666554455555 7888888888888864433
Q ss_pred ccc-cCcccccccccccccCCCCCCC-CCCCCCccccc
Q 011005 81 GEI-TKLSRLDYLNLSSNKLSGPVPF-SNNDLSSMHTV 116 (496)
Q Consensus 81 ~~~-~~l~~L~~l~l~~n~l~~~~~~-~~~~l~~l~~~ 116 (496)
..+ ..+++|+.|++++|++++.... ....+++|+.+
T Consensus 474 ~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L 511 (594)
T 2p1m_B 474 HHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSL 511 (594)
T ss_dssp HHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEE
T ss_pred HHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEE
Confidence 333 5678888888888888543322 23346666544
No 419
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.65 E-value=0.00037 Score=66.23 Aligned_cols=158 Identities=15% Similarity=0.130 Sum_probs=89.1
Q ss_pred ccHHHHHHHHhCCCCc-----ceeeecCCeeEEEEEeCCCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccc--cccc
Q 011005 195 IVYEDLIEATEDFDIR-----YCIGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRN--IVKL 267 (496)
Q Consensus 195 ~~~~~~~~~~~~~~~~-----~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~~ 267 (496)
++.+++.....+|.+. +.|+.|....+|+....+| .+++|....... ...+..|+.+++.+...+ +.++
T Consensus 7 ~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~~---~~~l~~e~~~l~~L~~~g~~vP~~ 82 (322)
T 2ppq_A 7 ITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKRVE---KNDLPFFLGLMQHLAAKGLSCPLP 82 (322)
T ss_dssp CCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC------CCHHHHHHHHHHHHHHTTCCCCCB
T ss_pred CCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCCCC---HHHHHHHHHHHHHHHHCCCCCCcc
Confidence 4456666666677662 3456688889999987666 578898865321 134567888888875323 2333
Q ss_pred cce------eecCCeEEEEEEecCCCChhh--------------hhhCC----CCCc--cC---CHHHHHH---------
Q 011005 268 YGY------CLHKKCMFLIYEYMERGSLFC--------------NLHNN----EDAV--EL---DWAKRVN--------- 309 (496)
Q Consensus 268 ~~~------~~~~~~~~lV~e~~~~g~L~~--------------~l~~~----~~~~--~~---~~~~~~~--------- 309 (496)
+.. ....+..+++++|++|..+.. .++.. .... .. .|.....
T Consensus 83 ~~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ 162 (322)
T 2ppq_A 83 LPRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEV 162 (322)
T ss_dssp CCBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGT
T ss_pred cCCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhh
Confidence 321 122356789999999865421 01110 0000 00 1211000
Q ss_pred ---HHHHHHHHHHHHHhC----CCCCeEEeCCCCCceEecCCCCeEEccccccc
Q 011005 310 ---IVKAMAHALAYLHHD----CSPSIIHRDISSNNILLNSKLEAFVADFGTAR 356 (496)
Q Consensus 310 ---i~~~i~~~l~~lh~~----~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~ 356 (496)
+...+...++.++.. ...+++|+|+.+.||+++++..+.++||+.+.
T Consensus 163 ~~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 163 EKGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp STTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred hhhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 001133444555421 14579999999999999987666899998774
No 420
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.63 E-value=0.00018 Score=71.35 Aligned_cols=78 Identities=13% Similarity=0.063 Sum_probs=48.1
Q ss_pred CCCeEEeCCCCCceEecCCCCeEEccccccccccCCCCCcccccc--ccccccccccccC---CcCcccchhhHHHHHHH
Q 011005 326 SPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRTLLAG--TYGYIAPELAYTM---VMTEKCDVYSFGVVTLE 400 (496)
Q Consensus 326 ~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g--t~~y~aPE~~~~~---~~~~~~DvwslG~il~e 400 (496)
...++|||++|.||+++.++ +.++||+.+....... ....... ...|.+|+..... .-....++.+....+|+
T Consensus 231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~-Dla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (420)
T 2pyw_A 231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGF-DIGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWN 308 (420)
T ss_dssp CCEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHH-HHHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHH
T ss_pred CCeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHH-HHHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHH
Confidence 67899999999999999876 9999999886532110 0011111 1245666554321 11223455677777887
Q ss_pred HHhCC
Q 011005 401 VLMGK 405 (496)
Q Consensus 401 l~~g~ 405 (496)
.+++.
T Consensus 309 ~y~~~ 313 (420)
T 2pyw_A 309 LFNKR 313 (420)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77653
No 421
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.60 E-value=0.00035 Score=65.28 Aligned_cols=78 Identities=18% Similarity=0.203 Sum_probs=54.6
Q ss_pred CCCcceeeecCCeeEEEEEeCCCcEEEEEEcccchhHHHHHHHHHHHHHHHhhccc---ccccccceeecCCeEEEEEEe
Q 011005 207 FDIRYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHR---NIVKLYGYCLHKKCMFLIYEY 283 (496)
Q Consensus 207 ~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~---niv~~~~~~~~~~~~~lV~e~ 283 (496)
..-.+.+|.|..+.||+....+|+.|++|+...... .....+..|+..|+.+.-. -+++++++. . .++||||
T Consensus 17 v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~-~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~--~--~~lv~e~ 91 (288)
T 3f7w_A 17 VAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAP-ALDGLFRAEALGLDWLGRSFGSPVPQVAGWD--D--RTLAMEW 91 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCC-CCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE--T--TEEEEEC
T ss_pred eEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCc-chhhHHHHHHHHHHHHHhhCCCCcceEEecc--C--ceEEEEe
Confidence 444567999999999999999999999998654321 1123467899999988522 234444432 2 3689999
Q ss_pred cCCCCh
Q 011005 284 MERGSL 289 (496)
Q Consensus 284 ~~~g~L 289 (496)
++++..
T Consensus 92 l~~~~~ 97 (288)
T 3f7w_A 92 VDERPP 97 (288)
T ss_dssp CCCCCC
T ss_pred ecccCC
Confidence 987654
No 422
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=97.58 E-value=1.1e-05 Score=78.06 Aligned_cols=103 Identities=17% Similarity=0.209 Sum_probs=62.5
Q ss_pred CCCCCEEeccCCccCCCCCccCC--CCCCCCEEeccC--CcCCCC-----Cchhh--cCCcccCeecccccccCCCCCcc
Q 011005 14 LKNLIKLDVGSNSLIGPIPSALG--SLTNLSNLDLSS--NKLSGK-----IPPEI--ASMKYLTQLDLSNNNIQGSIPGE 82 (496)
Q Consensus 14 l~~L~~L~l~~n~i~~~~p~~~~--~l~~L~~l~l~~--n~l~~~-----~p~~~--~~l~~L~~l~l~~N~l~~~~~~~ 82 (496)
+++|+.|+|..|.+.......+. .+++|+.|+|+. |...+. +...+ ..+++|+.|+|++|.+.+..+..
T Consensus 192 ~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~ 271 (362)
T 2ra8_A 192 RPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEM 271 (362)
T ss_dssp CTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHHHH
T ss_pred CCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHHHH
Confidence 67888888888877633222333 678888888853 221111 11222 24788888888888876333222
Q ss_pred cc---CcccccccccccccCCCC----CCCCCCCCCccccc
Q 011005 83 IT---KLSRLDYLNLSSNKLSGP----VPFSNNDLSSMHTV 116 (496)
Q Consensus 83 ~~---~l~~L~~l~l~~n~l~~~----~~~~~~~l~~l~~~ 116 (496)
+. .+++|+.|+|+.|.|++. ++..+..+++|+.|
T Consensus 272 la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L 312 (362)
T 2ra8_A 272 FLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFI 312 (362)
T ss_dssp HHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEE
T ss_pred HHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEE
Confidence 22 478888888888888753 23333445566544
No 423
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=97.56 E-value=3.1e-06 Score=88.12 Aligned_cols=86 Identities=20% Similarity=0.205 Sum_probs=41.8
Q ss_pred CCCCCCEEeccCCccCCCCCccCC-CCCCCCEEeccCC-cCCCC-CchhhcCCcccCeecccccccCCCCCcccc----C
Q 011005 13 NLKNLIKLDVGSNSLIGPIPSALG-SLTNLSNLDLSSN-KLSGK-IPPEIASMKYLTQLDLSNNNIQGSIPGEIT----K 85 (496)
Q Consensus 13 ~l~~L~~L~l~~n~i~~~~p~~~~-~l~~L~~l~l~~n-~l~~~-~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~----~ 85 (496)
.+++|+.|+|++|.+++..+..+. .+++|+.|+|++| .++.. ++..+..+++|++|+|++|.+++..+..+. .
T Consensus 103 ~~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~ 182 (594)
T 2p1m_B 103 SYTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDT 182 (594)
T ss_dssp HCTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTT
T ss_pred hCCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhc
Confidence 345555566655555543333333 4555566665555 33321 223333555566666665555433322222 3
Q ss_pred ccccccccccccc
Q 011005 86 LSRLDYLNLSSNK 98 (496)
Q Consensus 86 l~~L~~l~l~~n~ 98 (496)
+++|+.|++++|.
T Consensus 183 ~~~L~~L~l~~~~ 195 (594)
T 2p1m_B 183 YTSLVSLNISCLA 195 (594)
T ss_dssp CCCCCEEECTTCC
T ss_pred CCcCcEEEecccC
Confidence 4455555555554
No 424
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=97.53 E-value=0.0014 Score=62.38 Aligned_cols=158 Identities=15% Similarity=0.189 Sum_probs=89.9
Q ss_pred ccHHHHHHHHhCCCC-----cceeeecCCeeEEEEEeCCCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccc--cccc
Q 011005 195 IVYEDLIEATEDFDI-----RYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRN--IVKL 267 (496)
Q Consensus 195 ~~~~~~~~~~~~~~~-----~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~~ 267 (496)
++.+.+....+.|.+ ...++ |....||+....+|+.+++|....... ....+..|..+++.+...+ ++++
T Consensus 11 l~~~~i~~~l~~~g~~~~~~~~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~~--~~~~~~~E~~~~~~L~~~g~~vp~~ 87 (328)
T 1zyl_A 11 LHPDTIMDALFEHGIRVDSGLTPLN-SYENRVYQFQDEDRRRFVVKFYRPERW--TADQILEEHQFALQLVNDEVPVAAP 87 (328)
T ss_dssp CCHHHHHHHHHHTTCCCCSCCEEEC-CSSSEEEEECCTTCCCEEEEEECTTTS--CHHHHHHHHHHHHHHHHTTCSBCCC
T ss_pred CCHHHHHHHHHHcCCCCCceEEeec-CcccceEEEEcCCCCEEEEEEcCCCCC--CHHHHHHHHHHHHHHHHcCCeecce
Confidence 444555555555543 23466 888899999877787899999864321 1245667888888885323 3444
Q ss_pred cce-----eecCCeEEEEEEecCCCChhh----h----------hhC----CC--CCccCCHHHH---------------
Q 011005 268 YGY-----CLHKKCMFLIYEYMERGSLFC----N----------LHN----NE--DAVELDWAKR--------------- 307 (496)
Q Consensus 268 ~~~-----~~~~~~~~lV~e~~~~g~L~~----~----------l~~----~~--~~~~~~~~~~--------------- 307 (496)
+.. ....+..+++|++++|..+.. . ++. .. .....++...
T Consensus 88 ~~~~g~~~~~~~g~~~~l~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 167 (328)
T 1zyl_A 88 VAFNGQTLLNHQGFYFAVFPSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIP 167 (328)
T ss_dssp CCBTTBSCEEETTEEEEEEECCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSC
T ss_pred eecCCcEEEEECCEEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCC
Confidence 443 122456688999998854321 0 111 00 0011222111
Q ss_pred -------HHHHHHHHHHHHHHHh-CCCCCeEEeCCCCCceEecCCCCeEEcccccccc
Q 011005 308 -------VNIVKAMAHALAYLHH-DCSPSIIHRDISSNNILLNSKLEAFVADFGTARL 357 (496)
Q Consensus 308 -------~~i~~~i~~~l~~lh~-~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 357 (496)
...+.+++..+..+-. .....++|+|+++.||+++ + .+.++||+.+..
T Consensus 168 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 168 SGLKAAFLKATDELIAAVTAHWREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHCCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 1111222222222210 1145689999999999999 4 889999988754
No 425
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.42 E-value=0.00013 Score=59.10 Aligned_cols=55 Identities=24% Similarity=0.375 Sum_probs=26.8
Q ss_pred EEeccCCccC-CCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeeccccccc
Q 011005 19 KLDVGSNSLI-GPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNI 75 (496)
Q Consensus 19 ~L~l~~n~i~-~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l 75 (496)
.++.++++++ ..+|..+. ++|+.|+|++|+|+...+..|..+++|+.|+|++|.+
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~ 67 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPW 67 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCC
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCe
Confidence 4555566554 13333222 3455555555555533333445555555555555544
No 426
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.40 E-value=0.00065 Score=63.91 Aligned_cols=71 Identities=13% Similarity=0.059 Sum_probs=45.5
Q ss_pred cceeeecCCeeEEEEEeCCCcEEEEEEcccchhHHHHHHHHHHHHHHHhhccccc-ccccceeecCCeEEEEEEec-CCC
Q 011005 210 RYCIGTGGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNI-VKLYGYCLHKKCMFLIYEYM-ERG 287 (496)
Q Consensus 210 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~~~~~~~~~~~~~lV~e~~-~~g 287 (496)
.+.|+.|....+|+. +.+++|........ .....+|+.+++.+...++ .++++.+. +.-++++||+ +|.
T Consensus 23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~--~~~r~~E~~~l~~l~~~g~~P~~~~~~~--~~~~~v~e~i~~g~ 93 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTEE--YINRANEAVAAREAAKAGVSPEVLHVDP--ATGVMVTRYIAGAQ 93 (301)
T ss_dssp CEEEESCSSEEEEEE-----TTEEEEEECC------CCCHHHHHHHHHHHHHTTSSCCEEEECT--TTCCEEEECCTTCE
T ss_pred eeEcCCcccccccee-----eeEEEECCCCCccc--eeCHHHHHHHHHHHHHcCCCCceEEEEC--CCCEEEEeecCCCc
Confidence 677999999999998 55788887653211 1123568888888864444 35554433 2346899999 664
Q ss_pred Ch
Q 011005 288 SL 289 (496)
Q Consensus 288 ~L 289 (496)
++
T Consensus 94 ~l 95 (301)
T 3dxq_A 94 TM 95 (301)
T ss_dssp EC
T ss_pred cC
Confidence 44
No 427
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.39 E-value=0.00027 Score=57.29 Aligned_cols=57 Identities=25% Similarity=0.350 Sum_probs=46.0
Q ss_pred CEEeccCCcCC-CCCchhhcCCcccCeecccccccCCCCCccccCcccccccccccccCC
Q 011005 42 SNLDLSSNKLS-GKIPPEIASMKYLTQLDLSNNNIQGSIPGEITKLSRLDYLNLSSNKLS 100 (496)
Q Consensus 42 ~~l~l~~n~l~-~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~ 100 (496)
..++.++++|+ ..+|..+. ++|+.|+|++|+|+...++.|..+++|+.|+|++|++.
T Consensus 11 ~~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 11 TLVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp TEEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred CEEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 47889999987 34665543 46999999999999655667888999999999999986
No 428
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=97.37 E-value=0.00047 Score=65.92 Aligned_cols=141 Identities=16% Similarity=0.178 Sum_probs=74.1
Q ss_pred eeeecCCee-EEEEEeCCCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcccc--cccccceeecCCeEEEEEEecCCCC
Q 011005 212 CIGTGGYGS-VYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRN--IVKLYGYCLHKKCMFLIYEYMERGS 288 (496)
Q Consensus 212 ~lg~G~~g~-Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~~~~~~~~~~~~~lV~e~~~~g~ 288 (496)
.|+.|+... +|+....+++.+++|....... ..+..|+.+++.+...+ +.+++.+....+ +++||++.+..
T Consensus 25 ~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~~----~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g--~ll~e~l~~~~ 98 (333)
T 3csv_A 25 PLAGDASSRRYQRLRSPTGAKAVLMDWSPEEG----GDTQPFVDLAQYLRNLDISAPEIYAEEHARG--LLLIEDLGDAL 98 (333)
T ss_dssp C--------CCEEEECTTCCEEEEEECCTTTT----CCSHHHHHHHHHHHHTTCBCCCEEEEETTTT--EEEECCCCSCB
T ss_pred ECCCCCCCceEEEEEcCCCCeEEEEECCCCCC----ccccHHHHHHHHHHhCCCCCCceeeecCCCC--EEEEeeCCCcc
Confidence 455555444 6777765467777876544321 22456777887775323 455666544443 68999997766
Q ss_pred hhhhhhCC---------------------CC--CccCCHHHHH-------H-H------------HHHHHHHHHHHH---
Q 011005 289 LFCNLHNN---------------------ED--AVELDWAKRV-------N-I------------VKAMAHALAYLH--- 322 (496)
Q Consensus 289 L~~~l~~~---------------------~~--~~~~~~~~~~-------~-i------------~~~i~~~l~~lh--- 322 (496)
+.+.+... .. ...++..... . + ...+...+..+.
T Consensus 99 l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~~ 178 (333)
T 3csv_A 99 FTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSAQ 178 (333)
T ss_dssp HHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhc
Confidence 64333211 00 0112111100 0 0 001111222221
Q ss_pred hCCCCCeEEeCCCCCceEecCC----CCeEEccccccccc
Q 011005 323 HDCSPSIIHRDISSNNILLNSK----LEAFVADFGTARLL 358 (496)
Q Consensus 323 ~~~~~~i~H~dlkp~Nil~~~~----~~~kl~Dfg~~~~~ 358 (496)
......++|||+.+.||+++.+ +.+.++||+.+...
T Consensus 179 ~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G 218 (333)
T 3csv_A 179 LEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLG 218 (333)
T ss_dssp CCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEE
T ss_pred ccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcC
Confidence 1115689999999999999875 67899999988653
No 429
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=97.30 E-value=0.00057 Score=67.73 Aligned_cols=72 Identities=19% Similarity=0.252 Sum_probs=49.2
Q ss_pred ceeeecCCeeEEEEEeCC--------CcEEEEEEcccchhHHHHHHHHHHHHHHHhhccccc-ccccceeecCCeEEEEE
Q 011005 211 YCIGTGGYGSVYKAQLPN--------GKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNI-VKLYGYCLHKKCMFLIY 281 (496)
Q Consensus 211 ~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~~~~~~~~~~~~~lV~ 281 (496)
+.|+.|....+|++..++ ++.+++|+...... ...+.+|..+++.+...++ .++++.+.. .+|+
T Consensus 79 ~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~~---~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v~ 151 (429)
T 1nw1_A 79 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPET---ESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLE 151 (429)
T ss_dssp EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCCC---HHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEE
T ss_pred EEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCCc---HHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEEE
Confidence 457888889999998753 57899998844211 1234579999998864444 456665542 2899
Q ss_pred EecCCCCh
Q 011005 282 EYMERGSL 289 (496)
Q Consensus 282 e~~~~g~L 289 (496)
||++|.++
T Consensus 152 e~l~G~~l 159 (429)
T 1nw1_A 152 EYIPSRPL 159 (429)
T ss_dssp CCCCEEEC
T ss_pred EEeCCccc
Confidence 99987444
No 430
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=97.30 E-value=0.00032 Score=68.44 Aligned_cols=104 Identities=15% Similarity=0.159 Sum_probs=68.1
Q ss_pred hccCCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCCCCccccCcccc
Q 011005 10 EIGNLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGSIPGEITKLSRL 89 (496)
Q Consensus 10 ~~~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~l~~L 89 (496)
.|.++.+|+.+.+..+ ++.+-...|.++.+|+.+.+..+ ++..-...|.+|++|+.+.+.+|.++..-...|.++.+|
T Consensus 235 ~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L 312 (379)
T 4h09_A 235 AFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKL 312 (379)
T ss_dssp TTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTC
T ss_pred cccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccccccccccccccccceehhhhhcCCCCC
Confidence 4556666777777654 44344556777777777777554 442334567777778777777777764445677777777
Q ss_pred cccccccccCCCCCCCCCCCCCccccc
Q 011005 90 DYLNLSSNKLSGPVPFSNNDLSSMHTV 116 (496)
Q Consensus 90 ~~l~l~~n~l~~~~~~~~~~l~~l~~~ 116 (496)
+.+.+..+ ++..-..+|.++++|..+
T Consensus 313 ~~i~lp~~-l~~I~~~aF~~C~~L~~i 338 (379)
T 4h09_A 313 SSVTLPTA-LKTIQVYAFKNCKALSTI 338 (379)
T ss_dssp CEEECCTT-CCEECTTTTTTCTTCCCC
T ss_pred CEEEcCcc-ccEEHHHHhhCCCCCCEE
Confidence 77777644 665666777777777554
No 431
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=97.30 E-value=0.00029 Score=69.12 Aligned_cols=103 Identities=10% Similarity=0.170 Sum_probs=79.2
Q ss_pred hccCCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCCCCccccCcccc
Q 011005 10 EIGNLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGSIPGEITKLSRL 89 (496)
Q Consensus 10 ~~~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~l~~L 89 (496)
.|.++.+|+.+.+.++... .....|.++++|+.+.+. +.++..-...|.+|.+|+.++|..| ++..-..+|.+|.+|
T Consensus 260 aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L 336 (394)
T 4gt6_A 260 AFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQL 336 (394)
T ss_dssp TTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTC
T ss_pred eeeecccccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCC
Confidence 5778888999999776554 666788889999999986 4555344567888999999999765 553456688899999
Q ss_pred cccccccccCCCCCCCCCCCCCccccc
Q 011005 90 DYLNLSSNKLSGPVPFSNNDLSSMHTV 116 (496)
Q Consensus 90 ~~l~l~~n~l~~~~~~~~~~l~~l~~~ 116 (496)
+.+.+..+ ++..-..+|.++++|..+
T Consensus 337 ~~i~ip~s-v~~I~~~aF~~C~~L~~i 362 (394)
T 4gt6_A 337 ERIAIPSS-VTKIPESAFSNCTALNNI 362 (394)
T ss_dssp CEEEECTT-CCBCCGGGGTTCTTCCEE
T ss_pred CEEEECcc-cCEEhHhHhhCCCCCCEE
Confidence 99999654 776777889998888765
No 432
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=97.28 E-value=0.00034 Score=68.17 Aligned_cols=107 Identities=10% Similarity=0.033 Sum_probs=84.7
Q ss_pred cccCCh-hccCCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCCCCcc
Q 011005 4 IGIIPP-EIGNLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGSIPGE 82 (496)
Q Consensus 4 ~~~lp~-~~~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~ 82 (496)
++.++. .|.++.+|+.+.+..+ ++......|.++++|+.+.+.++.++.+-+..|.+|.+|+.+.|..+ ++..-..+
T Consensus 251 v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~a 328 (379)
T 4h09_A 251 VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYA 328 (379)
T ss_dssp CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTT
T ss_pred ccEeCccccceeehhcccccccc-ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHH
Confidence 444555 5778899999999755 55466678999999999999999998555678999999999999865 66455678
Q ss_pred ccCcccccccccccccCCCCCCCCCCCCCcc
Q 011005 83 ITKLSRLDYLNLSSNKLSGPVPFSNNDLSSM 113 (496)
Q Consensus 83 ~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~l 113 (496)
|.++.+|+.+.+..+ ++..-..+|.++..+
T Consensus 329 F~~C~~L~~i~ip~~-v~~I~~~aF~~c~~~ 358 (379)
T 4h09_A 329 FKNCKALSTISYPKS-ITLIESGAFEGSSIT 358 (379)
T ss_dssp TTTCTTCCCCCCCTT-CCEECTTTTTTSSCC
T ss_pred hhCCCCCCEEEECCc-cCEEchhHhhCCCCC
Confidence 999999999999765 666667778776544
No 433
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=97.25 E-value=0.0013 Score=63.78 Aligned_cols=141 Identities=20% Similarity=0.276 Sum_probs=82.3
Q ss_pred ceeeecCCeeEEEEEeC--------CCcEEEEEEcccchhHHHHHHHHHHHHHHHhhccccc-ccccceeecCCeEEEEE
Q 011005 211 YCIGTGGYGSVYKAQLP--------NGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNI-VKLYGYCLHKKCMFLIY 281 (496)
Q Consensus 211 ~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~~~~~~~~~~~~~lV~ 281 (496)
+.+..|-...+|+...+ +++.+++|+..... .....+.+|..+++.+...++ .++++.+.. .+||
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~--~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~ 129 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAIL--QGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLE 129 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC-----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEE
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCcc--chHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEE
Confidence 45667888899999875 25789999863321 123456689999999863333 556666543 2999
Q ss_pred EecCCCChhhh-----------------hhCCCC--CccCC--HHHHHHHHHHHHH-------------------HHHH-
Q 011005 282 EYMERGSLFCN-----------------LHNNED--AVELD--WAKRVNIVKAMAH-------------------ALAY- 320 (496)
Q Consensus 282 e~~~~g~L~~~-----------------l~~~~~--~~~~~--~~~~~~i~~~i~~-------------------~l~~- 320 (496)
||++|.++..- ++.... ..... +.++.++..++-. .+..
T Consensus 130 e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L 209 (379)
T 3feg_A 130 QYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNL 209 (379)
T ss_dssp ECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHH
T ss_pred EEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHH
Confidence 99998665311 121111 11122 3344444433321 1222
Q ss_pred ---HHh-CCCCCeEEeCCCCCceEecCC----CCeEEcccccccc
Q 011005 321 ---LHH-DCSPSIIHRDISSNNILLNSK----LEAFVADFGTARL 357 (496)
Q Consensus 321 ---lh~-~~~~~i~H~dlkp~Nil~~~~----~~~kl~Dfg~~~~ 357 (496)
|.. .....++|+|+.+.||+++.+ +.+.++||..+..
T Consensus 210 ~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 210 RKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp HHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred HHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 221 114579999999999999876 6899999998853
No 434
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=97.20 E-value=0.00025 Score=69.66 Aligned_cols=101 Identities=15% Similarity=0.068 Sum_probs=70.7
Q ss_pred hccCCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCCCCccccCcccc
Q 011005 10 EIGNLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGSIPGEITKLSRL 89 (496)
Q Consensus 10 ~~~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~l~~L 89 (496)
.|.++..|+.+.+..+.+. ...|..+.+|+.+.+.++ ++.+-..+|.++++|+.++|.++ ++..-..+|.++.+|
T Consensus 271 ~F~~~~~l~~~~~~~~~i~---~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L 345 (394)
T 4fs7_A 271 LFYNCSGLKKVIYGSVIVP---EKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSL 345 (394)
T ss_dssp TTTTCTTCCEEEECSSEEC---TTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTC
T ss_pred ccccccccceeccCceeec---cccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCC
Confidence 5667777887777766543 345777888888888765 55344456778888888888654 553445678888888
Q ss_pred cccccccccCCCCCCCCCCCCCccccc
Q 011005 90 DYLNLSSNKLSGPVPFSNNDLSSMHTV 116 (496)
Q Consensus 90 ~~l~l~~n~l~~~~~~~~~~l~~l~~~ 116 (496)
+.+.+..| ++..-..+|.++.+|+.+
T Consensus 346 ~~i~lp~~-l~~I~~~aF~~C~~L~~i 371 (394)
T 4fs7_A 346 SNINFPLS-LRKIGANAFQGCINLKKV 371 (394)
T ss_dssp CEECCCTT-CCEECTTTBTTCTTCCEE
T ss_pred CEEEECcc-ccEehHHHhhCCCCCCEE
Confidence 88888766 666667778888877654
No 435
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=97.20 E-value=2.2e-05 Score=75.88 Aligned_cols=107 Identities=18% Similarity=0.198 Sum_probs=69.9
Q ss_pred CChhccCCCCCCEEeccCCc-cCCCCCccCCCCCCCCEEeccCCcCCCCCchhhc--CCcccCeecccc--cccCCC---
Q 011005 7 IPPEIGNLKNLIKLDVGSNS-LIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIA--SMKYLTQLDLSN--NNIQGS--- 78 (496)
Q Consensus 7 lp~~~~~l~~L~~L~l~~n~-i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~--~l~~L~~l~l~~--N~l~~~--- 78 (496)
++..+..+|+|+.|+|++|. +. ++. +. +++|+.|+|..|.++......+. .+|+|+.|+|+. |...+.
T Consensus 164 L~~ll~~~P~L~~L~L~g~~~l~--l~~-~~-~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~ 239 (362)
T 2ra8_A 164 LSPVLDAMPLLNNLKIKGTNNLS--IGK-KP-RPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDM 239 (362)
T ss_dssp CHHHHHTCTTCCEEEEECCBTCB--CCS-CB-CTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCG
T ss_pred HHHHHhcCCCCcEEEEeCCCCce--ecc-cc-CCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhH
Confidence 44556788999999999884 32 333 43 89999999999988743333444 789999999863 332211
Q ss_pred --CCccc--cCcccccccccccccCCCCCCCCCC---CCCcccccc
Q 011005 79 --IPGEI--TKLSRLDYLNLSSNKLSGPVPFSNN---DLSSMHTVV 117 (496)
Q Consensus 79 --~~~~~--~~l~~L~~l~l~~n~l~~~~~~~~~---~l~~l~~~~ 117 (496)
+...+ ..+++|+.|+|.+|.+.+..+..+. .+++|+.|.
T Consensus 240 ~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~Ld 285 (362)
T 2ra8_A 240 NVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMD 285 (362)
T ss_dssp GGTGGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEE
T ss_pred HHHHHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEE
Confidence 11122 3578999999999998743222221 355665543
No 436
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=97.08 E-value=0.00041 Score=68.05 Aligned_cols=106 Identities=10% Similarity=0.159 Sum_probs=79.0
Q ss_pred ccCCh-hccCCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCCCCccc
Q 011005 5 GIIPP-EIGNLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGSIPGEI 83 (496)
Q Consensus 5 ~~lp~-~~~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~ 83 (496)
..+.. .|.++++|+.+.+. +.++.+....|.++++|+.++|..+ ++.+-..+|.+|.+|+.+.|..+ ++..-..+|
T Consensus 277 ~~I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF 353 (394)
T 4gt6_A 277 VSIGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VTKIPESAF 353 (394)
T ss_dssp CEECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CCBCCGGGG
T ss_pred ceecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cCEEhHhHh
Confidence 33444 57789999999997 5566566678999999999999875 66455578999999999999765 664556789
Q ss_pred cCcccccccccccccCCCCCCCCCCCCCccccc
Q 011005 84 TKLSRLDYLNLSSNKLSGPVPFSNNDLSSMHTV 116 (496)
Q Consensus 84 ~~l~~L~~l~l~~n~l~~~~~~~~~~l~~l~~~ 116 (496)
.+|.+|+.+++.+|.... ..+....+|+.+
T Consensus 354 ~~C~~L~~i~~~~~~~~~---~~~~~~~~L~~i 383 (394)
T 4gt6_A 354 SNCTALNNIEYSGSRSQW---NAISTDSGLQNL 383 (394)
T ss_dssp TTCTTCCEEEESSCHHHH---HTCBCCCCC---
T ss_pred hCCCCCCEEEECCceeeh---hhhhccCCCCEE
Confidence 999999999999886542 244455555443
No 437
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=96.93 E-value=0.0012 Score=64.61 Aligned_cols=101 Identities=13% Similarity=0.039 Sum_probs=74.2
Q ss_pred hccCCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccccCCCCCccccCcccc
Q 011005 10 EIGNLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNNIQGSIPGEITKLSRL 89 (496)
Q Consensus 10 ~~~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~l~~L 89 (496)
.+.++.+|+.+.+..+... .....|..+..|+.+.+..+.+. ...|..+.+|+.+.+..+ ++..-..+|.++.+|
T Consensus 248 ~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i~---~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L 322 (394)
T 4fs7_A 248 VFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIVP---EKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSL 322 (394)
T ss_dssp TTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEEC---TTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTC
T ss_pred cccccccceeEEcCCCcce-eeccccccccccceeccCceeec---cccccccccccccccccc-cceechhhhcCCCCC
Confidence 5667788888888877654 66677888888888888776543 246778888888888765 553445678888888
Q ss_pred cccccccccCCCCCCCCCCCCCccccc
Q 011005 90 DYLNLSSNKLSGPVPFSNNDLSSMHTV 116 (496)
Q Consensus 90 ~~l~l~~n~l~~~~~~~~~~l~~l~~~ 116 (496)
+.+++.++ ++..-..+|.++++|+.+
T Consensus 323 ~~i~lp~~-v~~I~~~aF~~c~~L~~i 348 (394)
T 4fs7_A 323 VSIDLPYL-VEEIGKRSFRGCTSLSNI 348 (394)
T ss_dssp CEECCCTT-CCEECTTTTTTCTTCCEE
T ss_pred CEEEeCCc-ccEEhHHhccCCCCCCEE
Confidence 88888644 666667788888888654
No 438
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=96.91 E-value=6.1e-05 Score=64.16 Aligned_cols=85 Identities=8% Similarity=0.164 Sum_probs=58.6
Q ss_pred CccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccccc-cCCCCCccccCc----cccccccccccc-CCCCCCC
Q 011005 32 PSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSNNN-IQGSIPGEITKL----SRLDYLNLSSNK-LSGPVPF 105 (496)
Q Consensus 32 p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~-l~~~~~~~~~~l----~~L~~l~l~~n~-l~~~~~~ 105 (496)
|.....-.+|+.|||+++.|+..--..+..|++|+.|+|+++. |+..--..++.+ ++|+.|+|+++. ||..-=.
T Consensus 54 P~~~~~~~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~ 133 (176)
T 3e4g_A 54 PTGPLDKYKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGII 133 (176)
T ss_dssp CCCSTTCCCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHH
T ss_pred CcccCCCceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHH
Confidence 4433333479999999999986545668899999999999985 664323345554 479999999985 7643222
Q ss_pred CCCCCCccccc
Q 011005 106 SNNDLSSMHTV 116 (496)
Q Consensus 106 ~~~~l~~l~~~ 116 (496)
.+..+++|+.|
T Consensus 134 ~L~~~~~L~~L 144 (176)
T 3e4g_A 134 ALHHFRNLKYL 144 (176)
T ss_dssp HGGGCTTCCEE
T ss_pred HHhcCCCCCEE
Confidence 34456666554
No 439
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.84 E-value=0.0038 Score=59.66 Aligned_cols=66 Identities=9% Similarity=0.097 Sum_probs=44.0
Q ss_pred cCCeeEEEEEeCCCcEEEEEEcccchhHHHHHHHHHHHHHHHhhcc---cccccccce------eecCCeEEEEEEecCC
Q 011005 216 GGYGSVYKAQLPNGKVFALKKLHTSEELAFIKSFKNEAQVLSQVLH---RNIVKLYGY------CLHKKCMFLIYEYMER 286 (496)
Q Consensus 216 G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h---~niv~~~~~------~~~~~~~~lV~e~~~~ 286 (496)
|....||+....+| .+++|+...... ..|+.+++.+.. +.+++++.. ....+..++||+|++|
T Consensus 34 g~~N~vy~v~~~~g-~~vLK~~~~~~~-------~~E~~~l~~L~~~g~~~vp~pi~~~~G~~~~~~~g~~~~l~~~i~G 105 (339)
T 3i1a_A 34 DTNAFAYQADSESK-SYFIKLKYGYHD-------EINLSIIRLLHDSGIKEIIFPIHTLEAKLFQQLKHFKIIAYPFIHA 105 (339)
T ss_dssp CSSCEEEEEECSSC-EEEEEEEECSSC-------CHHHHHHHHHHHTTCCSSCCCCCCTTSCSSEECSSEEEEEEECCCC
T ss_pred ccccceEEEEeCCC-CEEEEEecCccc-------hHHHHHHHHHHhcCCcccccceecCCCCEEEEECCEEEEEEeccCC
Confidence 33679999988777 899998765431 356666766642 224444432 2335678999999998
Q ss_pred CCh
Q 011005 287 GSL 289 (496)
Q Consensus 287 g~L 289 (496)
..+
T Consensus 106 ~~~ 108 (339)
T 3i1a_A 106 PNG 108 (339)
T ss_dssp CBT
T ss_pred CcC
Confidence 765
No 440
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.79 E-value=0.004 Score=61.99 Aligned_cols=74 Identities=18% Similarity=0.182 Sum_probs=47.8
Q ss_pred cceeeecCCeeEEEEEeCC-CcEEEEEEcccchhHHHHHHHHHHHHHHHhhccccc-ccccceeecCCeEEEEEEecCCC
Q 011005 210 RYCIGTGGYGSVYKAQLPN-GKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNI-VKLYGYCLHKKCMFLIYEYMERG 287 (496)
Q Consensus 210 ~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~~~~~~~~~~~~~lV~e~~~~g 287 (496)
.+.|+.|-...+|+....+ +..+++|+....... .-...+|..+++.+...++ .++++.+. + .+||||++|.
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~--~idR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~G~ 186 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKTDE--IINREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMDGY 186 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-CCS--CSCHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCCSE
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCChhh--hcCHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeCCc
Confidence 3468888889999998865 578888887442211 1112588999999975444 46666663 2 2599999885
Q ss_pred Ch
Q 011005 288 SL 289 (496)
Q Consensus 288 ~L 289 (496)
++
T Consensus 187 ~l 188 (458)
T 2qg7_A 187 AL 188 (458)
T ss_dssp EC
T ss_pred cC
Confidence 54
No 441
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.74 E-value=0.0045 Score=59.91 Aligned_cols=73 Identities=14% Similarity=0.085 Sum_probs=44.8
Q ss_pred ceeeecCCeeEEEEEeCC---------CcEEEEEEcccchhHHHHHHHHHHHHHHHhhccccc-ccccceeecCCeEEEE
Q 011005 211 YCIGTGGYGSVYKAQLPN---------GKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNI-VKLYGYCLHKKCMFLI 280 (496)
Q Consensus 211 ~~lg~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~~~~~~~~~~~~~lV 280 (496)
..++.|....+|+....+ ++.+++|+....... ......|..+++.+...++ .++++.. .+ ++|
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~--~~~~~~E~~~l~~L~~~g~~P~~~~~~--~~--~~v 112 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDE--LYNTISEFEVYKTMSKYKIAPQLLNTF--NG--GRI 112 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGG--TSCHHHHHHHHHHHHHTTSSCCEEEEE--TT--EEE
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccc--eecHHHHHHHHHHHHhcCCCCceEEec--CC--cEE
Confidence 457778888999998754 268888887653221 1123678888888864443 4566544 22 589
Q ss_pred EEecCCCCh
Q 011005 281 YEYMERGSL 289 (496)
Q Consensus 281 ~e~~~~g~L 289 (496)
|||++|..+
T Consensus 113 ~e~i~G~~l 121 (369)
T 3c5i_A 113 EEWLYGDPL 121 (369)
T ss_dssp EECCCSEEC
T ss_pred EEEecCCcC
Confidence 999988543
No 442
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=96.65 E-value=0.01 Score=51.83 Aligned_cols=103 Identities=17% Similarity=0.066 Sum_probs=66.7
Q ss_pred CChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCceEecCCCCeEEccccccccccCCCCCcc
Q 011005 287 GSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNILLNSKLEAFVADFGTARLLHADSSNRT 366 (496)
Q Consensus 287 g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 366 (496)
-+|.++|..... .++++++|.++.|.+.+|.-.-.. ... ..+=+.|..|++..+|.|...+ +.+.
T Consensus 33 vSL~eIL~~~~~--PlsEEqaWALc~Qc~~~L~~~~~~-~~~-~~~i~~~~~i~l~~dG~V~f~~-~~s~---------- 97 (229)
T 2yle_A 33 LSLEEILRLYNQ--PINEEQAWAVCYQCCGSLRAAARR-RQP-RHRVRSAAQIRVWRDGAVTLAP-AADD---------- 97 (229)
T ss_dssp EEHHHHHHHHTS--CCCHHHHHHHHHHHHHHHHHHHHT-TCC-CCCCCSGGGEEEETTSCEEECC-C-------------
T ss_pred ccHHHHHHHcCC--CcCHHHHHHHHHHHHHHHHhhhhc-ccC-CceecCCcceEEecCCceeccc-cccc----------
Confidence 378888876543 799999999999999998877211 011 1233457889999999887763 1110
Q ss_pred ccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCC
Q 011005 367 LLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHP 407 (496)
Q Consensus 367 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p 407 (496)
.....+.|||... ...+.+.=|||+|+++|..+--..|
T Consensus 98 --~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~ 135 (229)
T 2yle_A 98 --AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLK 135 (229)
T ss_dssp -----------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCC
T ss_pred --ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCC
Confidence 1122466888753 3456788999999999999965555
No 443
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.55 E-value=0.00044 Score=60.03 Aligned_cols=87 Identities=9% Similarity=0.139 Sum_probs=64.0
Q ss_pred cCCCCCCEEeccCC-ccCC----CCCccCCCCCCCCEEeccCCcCCCC----CchhhcCCcccCeecccccccCCC----
Q 011005 12 GNLKNLIKLDVGSN-SLIG----PIPSALGSLTNLSNLDLSSNKLSGK----IPPEIASMKYLTQLDLSNNNIQGS---- 78 (496)
Q Consensus 12 ~~l~~L~~L~l~~n-~i~~----~~p~~~~~l~~L~~l~l~~n~l~~~----~p~~~~~l~~L~~l~l~~N~l~~~---- 78 (496)
.+-+.|+.|+|++| +|.. .+.+.+..-+.|+.|+|++|+|.+. +.+.+..-+.|+.|+|+.|+|...
T Consensus 38 ~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~a 117 (197)
T 1pgv_A 38 EDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLAR 117 (197)
T ss_dssp TTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHH
T ss_pred hcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHH
Confidence 34567999999986 7752 2345567778999999999999732 334555668899999999999732
Q ss_pred CCccccCccccccccccccc
Q 011005 79 IPGEITKLSRLDYLNLSSNK 98 (496)
Q Consensus 79 ~~~~~~~l~~L~~l~l~~n~ 98 (496)
+...+..-+.|+.|+|++|.
T Consensus 118 la~aL~~N~tL~~L~L~n~~ 137 (197)
T 1pgv_A 118 LLRSTLVTQSIVEFKADNQR 137 (197)
T ss_dssp HHHHTTTTCCCSEEECCCCS
T ss_pred HHHHHhhCCceeEEECCCCc
Confidence 23356666789999998653
No 444
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=96.14 E-value=0.018 Score=55.98 Aligned_cols=142 Identities=18% Similarity=0.227 Sum_probs=82.3
Q ss_pred ceeeecCCeeEEEEEeCC--------CcEEEEEEcccchhH----------H-------HHHHHHHHHHHHHhhcccc-c
Q 011005 211 YCIGTGGYGSVYKAQLPN--------GKVFALKKLHTSEEL----------A-------FIKSFKNEAQVLSQVLHRN-I 264 (496)
Q Consensus 211 ~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~----------~-------~~~~~~~e~~~l~~l~h~n-i 264 (496)
+.|..|-...+|++..++ ++.|++++.-..... . ....+..|..+++.+...+ .
T Consensus 58 ~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~ 137 (401)
T 3f2s_A 58 SVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLG 137 (401)
T ss_dssp EEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSS
T ss_pred EEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCC
Confidence 346667778999998764 367888886442210 0 0112335889999886444 4
Q ss_pred ccccceeecCCeEEEEEEecCCCChhhh-----------------hhCCC--CCccCC--HHHHHHHHHHHH--------
Q 011005 265 VKLYGYCLHKKCMFLIYEYMERGSLFCN-----------------LHNNE--DAVELD--WAKRVNIVKAMA-------- 315 (496)
Q Consensus 265 v~~~~~~~~~~~~~lV~e~~~~g~L~~~-----------------l~~~~--~~~~~~--~~~~~~i~~~i~-------- 315 (496)
.++++++..+ +|+||++|.+|... ++... ...... +..+.++..++.
T Consensus 138 Pkl~~~~~~G----~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~ 213 (401)
T 3f2s_A 138 PKLYGIFPQG----RLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEES 213 (401)
T ss_dssp CCEEEEETTE----EEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSHH
T ss_pred CeEEEEeCCC----eEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcchh
Confidence 5666666432 89999997555211 11111 111222 223333333221
Q ss_pred --------------HHH----HHHHh-CCCCCeEEeCCCCCceEecCC------CCeEEccccccc
Q 011005 316 --------------HAL----AYLHH-DCSPSIIHRDISSNNILLNSK------LEAFVADFGTAR 356 (496)
Q Consensus 316 --------------~~l----~~lh~-~~~~~i~H~dlkp~Nil~~~~------~~~kl~Dfg~~~ 356 (496)
.-+ .+|.. .....++|+|+.+.||+++.+ +.+.++||..+.
T Consensus 214 ~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~ 279 (401)
T 3f2s_A 214 RIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred hhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence 111 22221 124578999999999999886 789999998874
No 445
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=95.25 E-value=0.0017 Score=56.34 Aligned_cols=89 Identities=13% Similarity=0.147 Sum_probs=60.0
Q ss_pred hccCCCCCCEEeccCCccCC----CCCccCCCCCCCCEEeccCCcCCCC----CchhhcCCcccCeeccccccc---CC-
Q 011005 10 EIGNLKNLIKLDVGSNSLIG----PIPSALGSLTNLSNLDLSSNKLSGK----IPPEIASMKYLTQLDLSNNNI---QG- 77 (496)
Q Consensus 10 ~~~~l~~L~~L~l~~n~i~~----~~p~~~~~l~~L~~l~l~~n~l~~~----~p~~~~~l~~L~~l~l~~N~l---~~- 77 (496)
.+..-..|+.|+|++|+|.. .+.+.+..-+.|+.|+|+.|.|.+. +-+.+..-+.|+.|+|++|.. ..
T Consensus 65 aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala~aL~~N~tL~~L~L~n~~~~~ig~~ 144 (197)
T 1pgv_A 65 AACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQSVLGNQ 144 (197)
T ss_dssp HHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSSCCCCHH
T ss_pred HHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHHHHHhhCCceeEEECCCCcCcCcCHH
Confidence 34455679999999999983 2334455668899999999999842 223455567799999997643 31
Q ss_pred ---CCCccccCccccccccccccc
Q 011005 78 ---SIPGEITKLSRLDYLNLSSNK 98 (496)
Q Consensus 78 ---~~~~~~~~l~~L~~l~l~~n~ 98 (496)
.+...+..-+.|+.|+++.|.
T Consensus 145 g~~~ia~aL~~N~tL~~L~l~~~~ 168 (197)
T 1pgv_A 145 VEMDMMMAIEENESLLRVGISFAS 168 (197)
T ss_dssp HHHHHHHHHHHCSSCCEEECCCCC
T ss_pred HHHHHHHHHHhCCCcCeEeccCCC
Confidence 122344445677777775443
No 446
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=95.05 E-value=0.084 Score=51.78 Aligned_cols=73 Identities=15% Similarity=0.083 Sum_probs=48.1
Q ss_pred ceeeecCCeeEEEEEeCC--------CcEEEEEEcccchhHHHHHHHHHHHHHHHhhccccc-ccccceeecCCeEEEEE
Q 011005 211 YCIGTGGYGSVYKAQLPN--------GKVFALKKLHTSEELAFIKSFKNEAQVLSQVLHRNI-VKLYGYCLHKKCMFLIY 281 (496)
Q Consensus 211 ~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~~~~~~~~~~~~~lV~ 281 (496)
+.+..|-...+|+....+ ++.+++|+...... ..-...+|..+++.+...++ .++++.+ .+ ++||
T Consensus 76 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~--~~idR~~E~~~l~~L~~~gi~P~l~~~~--~~--~~I~ 149 (424)
T 3mes_A 76 KQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVG--KFYDSKVELDVFRYLSNINIAPNIIADF--PE--GRIE 149 (424)
T ss_dssp EEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC---CCCCHHHHHHHHHHHHHTTSSCCEEEEE--TT--EEEE
T ss_pred EEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcc--hhcCHHHHHHHHHHHHhcCCCCCEEEEc--CC--CEEE
Confidence 456677888999998753 57899998654321 11224678999988864333 4555433 22 6899
Q ss_pred EecCCCCh
Q 011005 282 EYMERGSL 289 (496)
Q Consensus 282 e~~~~g~L 289 (496)
||++|..+
T Consensus 150 efI~G~~l 157 (424)
T 3mes_A 150 EFIDGEPL 157 (424)
T ss_dssp ECCCSEEC
T ss_pred EEeCCccC
Confidence 99998664
No 447
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=94.30 E-value=0.22 Score=48.51 Aligned_cols=30 Identities=30% Similarity=0.452 Sum_probs=25.1
Q ss_pred CeEEeCCCCCceEe------cCCCCeEEcccccccc
Q 011005 328 SIIHRDISSNNILL------NSKLEAFVADFGTARL 357 (496)
Q Consensus 328 ~i~H~dlkp~Nil~------~~~~~~kl~Dfg~~~~ 357 (496)
.++|+|+.+.||++ +++..+.++||..|..
T Consensus 245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eeEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 46799999999999 4567799999998854
No 448
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=94.13 E-value=0.074 Score=33.09 Aligned_cols=11 Identities=18% Similarity=0.310 Sum_probs=4.2
Q ss_pred HHHHHHhHhhc
Q 011005 160 FACLLLAKRKY 170 (496)
Q Consensus 160 ~~~~~~~~r~~ 170 (496)
++++++.+||+
T Consensus 29 ~~~~~~~RRr~ 39 (44)
T 2ks1_B 29 LGIGLFMRRRH 39 (44)
T ss_dssp HHHHHHHHTTT
T ss_pred HHHHHHhhhhH
Confidence 33333434433
No 449
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=93.52 E-value=0.11 Score=32.31 Aligned_cols=14 Identities=7% Similarity=-0.104 Sum_probs=5.6
Q ss_pred CCccchhhhhhHHH
Q 011005 140 PATLFVEIFLPLTI 153 (496)
Q Consensus 140 ~~~~~~~i~~~~~~ 153 (496)
+....+...++.++
T Consensus 7 s~~~aIA~gVVgGv 20 (44)
T 2l2t_A 7 ARTPLIAAGVIGGL 20 (44)
T ss_dssp CSSHHHHHHHHHHH
T ss_pred CCcceEEEeehHHH
Confidence 33334444444433
No 450
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=91.89 E-value=0.61 Score=40.61 Aligned_cols=118 Identities=8% Similarity=0.107 Sum_probs=80.6
Q ss_pred cccccccccceeecCCeEEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEeCCCCCce
Q 011005 260 LHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALAYLHHDCSPSIIHRDISSNNI 339 (496)
Q Consensus 260 ~h~niv~~~~~~~~~~~~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~~i~H~dlkp~Ni 339 (496)
.||+.++. .+-...+.+.+.++.-+.+.-...+. ..+...+++++.+|+....+++ .-+|--++|+|+
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~ik------~~~~~eKlr~l~ni~~l~~~~~-----~r~tf~L~P~NL 110 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDINDNHTPFDNIK------SFTKNEKLRYLLNIKNLEEVNR-----TRYTFVLAPDEL 110 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCCTTSEEGGGGG------GSCHHHHHHHHHHGGGGGGGGG-----SSEECCCSGGGE
T ss_pred cCCcccce-EEEEcccEEEEEEEcCcccCCHHHHH------hcCHHHHHHHHHHHHHHHHHhc-----CceEEEEecceE
Confidence 47777766 45556666666666544332222233 5788999999999999887766 357889999999
Q ss_pred EecCCCCeEEccccccccccCCCCCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccc
Q 011005 340 LLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDIL 411 (496)
Q Consensus 340 l~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~ 411 (496)
+++.++.+++.=.|+...+. |. ..++..=.-.+=+++..+++++..|+..
T Consensus 111 ~f~~~~~p~i~~RGik~~l~-----------------P~-----~~~ee~fL~qyKAliiall~~K~~Fe~l 160 (215)
T 4ann_A 111 FFTRDGLPIAKTRGLQNVVD-----------------PL-----PVSEAEFLTRYKALVICAFNEKQSFDAL 160 (215)
T ss_dssp EECTTSCEEESCCEETTTBS-----------------CC-----CCCHHHHHHHHHHHHHHHHCTTCCHHHH
T ss_pred EEcCCCCEEEEEccCccCCC-----------------CC-----CCCHHHHHHHHHHHHHHHHcCCCCHHHH
Confidence 99999999998777653332 11 1111222345677888999999998643
No 451
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=91.73 E-value=0.18 Score=31.23 Aligned_cols=17 Identities=24% Similarity=0.303 Sum_probs=6.8
Q ss_pred HHHHHHHHHHHHhHhhc
Q 011005 154 VLSVIVFACLLLAKRKY 170 (496)
Q Consensus 154 ~~~~i~~~~~~~~~r~~ 170 (496)
++++++++++++.+||+
T Consensus 23 l~vi~~l~~~~~~RRR~ 39 (44)
T 2jwa_A 23 LVVVLGVVFGILIKRRQ 39 (44)
T ss_dssp HHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhheehhh
Confidence 33333334344444443
No 452
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=86.95 E-value=2.3 Score=37.05 Aligned_cols=117 Identities=12% Similarity=0.128 Sum_probs=79.7
Q ss_pred cccccccccceeecCCeEEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHHHHHHH-HHHhCCCCCeEEeCCCCCc
Q 011005 260 LHRNIVKLYGYCLHKKCMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAMAHALA-YLHHDCSPSIIHRDISSNN 338 (496)
Q Consensus 260 ~h~niv~~~~~~~~~~~~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~-~lh~~~~~~i~H~dlkp~N 338 (496)
.||++ -...-.+.+.+.+.++.-+++.-...+. ..+..++++++.+|+.... +++ .-+|--++|+|
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i~------~~~~~eKlrll~nl~~L~~~~~~-----~r~tf~l~P~N 114 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAIR------KTTLLSRIRAAIHLVSKVKHHSA-----RRLIFIVCPEN 114 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHHH------TSCHHHHHHHHHHHHHHHSSCCS-----SSEECCCCGGG
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHHH------hcCHHHHHHHHHHHHHHHHHhhh-----CceeEEEeCce
Confidence 47777 3444466777777777655544444443 5688899999999988777 555 46888999999
Q ss_pred eEecCCCCeEEccccccccccCCCCCccccccccccccccccccCCcCcccchhhHHHHHHHHHhCCCCCccc
Q 011005 339 ILLNSKLEAFVADFGTARLLHADSSNRTLLAGTYGYIAPELAYTMVMTEKCDVYSFGVVTLEVLMGKHPRDIL 411 (496)
Q Consensus 339 il~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p~~~~ 411 (496)
++++.++.+++.=.|+-..+ +|.- .++..=.-++=+++..++.++..|+..
T Consensus 115 L~f~~~~~p~i~hRGi~~~l-----------------pP~e-----~~ee~fl~qyKali~all~~K~~Fe~l 165 (219)
T 4ano_A 115 LMFNRALEPFFLHVGVKESL-----------------PPDE-----WDDERLLREVKATVLALTEGEYRFDEY 165 (219)
T ss_dssp EEECTTCCEEESCCEETTTB-----------------SSCS-----CCHHHHHHHHHHHHHHHTTCSSCHHHH
T ss_pred EEEeCCCcEEEEEcCCcccC-----------------CCCC-----CCHHHHHHHHHHHHHHHHcCCCCHHHH
Confidence 99999999999877765333 2221 111112335667888888888888643
No 453
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=85.30 E-value=0.093 Score=52.21 Aligned_cols=61 Identities=10% Similarity=0.047 Sum_probs=17.3
Q ss_pred CcceeeecCCeeEEEEEeCC-CcEEEE------EEcccch-hHHHHHHHHHHHHHHHhhcccccccccceee
Q 011005 209 IRYCIGTGGYGSVYKAQLPN-GKVFAL------KKLHTSE-ELAFIKSFKNEAQVLSQVLHRNIVKLYGYCL 272 (496)
Q Consensus 209 ~~~~lg~G~~g~Vy~~~~~~-~~~vav------K~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~ 272 (496)
+.+.+| ||.||+|.+.. ..+||| |..+... ..+....+.+|..+++..+|+|+++.+++..
T Consensus 146 l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~ 214 (463)
T 3cxl_A 146 IYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKV 214 (463)
T ss_dssp STTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEE
T ss_pred ccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEE
Confidence 345566 99999998754 357888 7665432 2233456788999999999999999987664
No 454
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=64.45 E-value=13 Score=27.76 Aligned_cols=46 Identities=15% Similarity=0.158 Sum_probs=22.5
Q ss_pred ccCCCCCccCCCCCCCCEEeccCCcCCCCCchhhcCCcccCeecccc
Q 011005 26 SLIGPIPSALGSLTNLSNLDLSSNKLSGKIPPEIASMKYLTQLDLSN 72 (496)
Q Consensus 26 ~i~~~~p~~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~ 72 (496)
.++.+-...|.++++|+.+.|..+ ++.+-...|.+|.+|+.+.+..
T Consensus 7 ~vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 7 PVVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp CCCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred ccCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 334344445555555555555544 2223334555555555555543
No 455
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=60.55 E-value=13 Score=27.81 Aligned_cols=47 Identities=13% Similarity=0.028 Sum_probs=39.1
Q ss_pred CccccCCh-hccCCCCCCEEeccCCccCCCCCccCCCCCCCCEEeccCC
Q 011005 2 YKIGIIPP-EIGNLKNLIKLDVGSNSLIGPIPSALGSLTNLSNLDLSSN 49 (496)
Q Consensus 2 n~~~~lp~-~~~~l~~L~~L~l~~n~i~~~~p~~~~~l~~L~~l~l~~n 49 (496)
..++.|.. .|.++.+|+.+.|-.+ ++.+-..+|.++.+|+.+.|...
T Consensus 6 ~~vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~~ 53 (100)
T 2lz0_A 6 EPVVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTGE 53 (100)
T ss_dssp CCCCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECCS
T ss_pred CccCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcCC
Confidence 45677877 7999999999999876 45577788999999999998764
No 456
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=55.26 E-value=21 Score=22.04 Aligned_cols=11 Identities=0% Similarity=-0.251 Sum_probs=4.2
Q ss_pred HHHHHHHHHhH
Q 011005 157 VIVFACLLLAK 167 (496)
Q Consensus 157 ~i~~~~~~~~~ 167 (496)
..++.++-.++
T Consensus 29 ~~~~~~~RRr~ 39 (44)
T 2ks1_B 29 LGIGLFMRRRH 39 (44)
T ss_dssp HHHHHHHHTTT
T ss_pred HHHHHHhhhhH
Confidence 33333333333
No 457
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=47.27 E-value=14 Score=22.76 Aligned_cols=18 Identities=22% Similarity=0.263 Sum_probs=7.2
Q ss_pred HHHHHHHHHHHHHHhHhh
Q 011005 152 TIVLSVIVFACLLLAKRK 169 (496)
Q Consensus 152 ~~~~~~i~~~~~~~~~r~ 169 (496)
.++++.+++.++-.++.+
T Consensus 24 ~vi~~l~~~~~~RRR~~~ 41 (44)
T 2jwa_A 24 VVVLGVVFGILIKRRQQK 41 (44)
T ss_dssp HHHHHHHHHHHHHHHCSC
T ss_pred HHHHHHHHHhheehhhhh
Confidence 333333444444444333
No 458
>1pi7_A VPU protein, U ORF protein; alpha helix, viral protein; NMR {Human immunodeficiency virus 1} SCOP: j.35.1.1 PDB: 1pi8_A 1pje_A 2gof_A 2goh_A 2jpx_A
Probab=39.92 E-value=27 Score=20.49 Aligned_cols=22 Identities=18% Similarity=0.514 Sum_probs=11.0
Q ss_pred hHHHHHHHHHHHHHHHhHhhcc
Q 011005 150 PLTIVLSVIVFACLLLAKRKYK 171 (496)
Q Consensus 150 ~~~~~~~~i~~~~~~~~~r~~~ 171 (496)
++++.+.++++...+.-.||.+
T Consensus 12 ivalIiaIVVWtiv~ieYrk~~ 33 (36)
T 1pi7_A 12 VVAIIIAIVVWSIVIIEGRGGK 33 (36)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 3344445555555555555444
No 459
>1iij_A ERBB-2 receptor protein-tyrosine kinase; alpha-helix-PI-bulge-alpha-helix, signaling protein; NMR {Synthetic} SCOP: j.35.1.1
Probab=36.36 E-value=13 Score=21.63 Aligned_cols=6 Identities=50% Similarity=0.528 Sum_probs=2.4
Q ss_pred HHHhHh
Q 011005 163 LLLAKR 168 (496)
Q Consensus 163 ~~~~~r 168 (496)
.++.+|
T Consensus 28 ~~~iRR 33 (35)
T 1iij_A 28 GILIKR 33 (35)
T ss_dssp THHHHH
T ss_pred heEEee
Confidence 333444
No 460
>2l9u_A Receptor tyrosine-protein kinase ERBB-3; transmenbrane dimer, membrane protein, EGFR; NMR {Homo sapiens}
Probab=35.39 E-value=47 Score=18.93 Aligned_cols=8 Identities=25% Similarity=0.343 Sum_probs=3.5
Q ss_pred HHHHhHhh
Q 011005 162 CLLLAKRK 169 (496)
Q Consensus 162 ~~~~~~r~ 169 (496)
+++|+.||
T Consensus 27 flywrgrr 34 (40)
T 2l9u_A 27 FLYWRGRR 34 (40)
T ss_dssp HHHHHHHH
T ss_pred eEEEcccc
Confidence 34444444
No 461
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=32.88 E-value=3.6e+02 Score=27.28 Aligned_cols=25 Identities=32% Similarity=0.397 Sum_probs=22.6
Q ss_pred eCCCCCceEecCCCCeEEccccccc
Q 011005 332 RDISSNNILLNSKLEAFVADFGTAR 356 (496)
Q Consensus 332 ~dlkp~Nil~~~~~~~kl~Dfg~~~ 356 (496)
+|=.++||+++.+|++.=+|||.+-
T Consensus 477 gDRH~~NILld~tG~v~HIDFG~~f 501 (614)
T 3ls8_A 477 GDRHLDNLLLTKTGKLFHIDFGYIL 501 (614)
T ss_dssp CCCCTTSEEECTTSCEEECCCSSCT
T ss_pred cCCCCcceeEcCCCCEeeeehHHhh
Confidence 5778999999999999999999883
No 462
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=28.05 E-value=1.6e+02 Score=27.28 Aligned_cols=77 Identities=16% Similarity=0.116 Sum_probs=41.1
Q ss_pred eEEEEEEecCCCChhhhhhCCCCCccCCHHHHHHHHHHH--HHHHHHHHhCCCCC-eEE-eCCCCCceEecCCCC-eEEc
Q 011005 276 CMFLIYEYMERGSLFCNLHNNEDAVELDWAKRVNIVKAM--AHALAYLHHDCSPS-IIH-RDISSNNILLNSKLE-AFVA 350 (496)
Q Consensus 276 ~~~lV~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i--~~~l~~lh~~~~~~-i~H-~dlkp~Nil~~~~~~-~kl~ 350 (496)
...++|+|.+|..|...-... ....+.... ..++ +-+++.+.+..++- .+. ..-.+.||+++++.. +..+
T Consensus 156 ~~~l~meyv~G~~L~e~~~~~-~~~~f~~~~----~k~LG~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL~~~~n~~~~~I 230 (342)
T 1cja_A 156 ANILLMELVRGITLNKLTTTS-APEVLTKST----MQQLGSLMALDVIVNNSDRLPIAWTNEGNLDNIMLSERGATVVPI 230 (342)
T ss_dssp SEEEEEECCCEEESTTCCSSS-HHHHSCHHH----HHHHHHHHHHHHHHTCCSSSCSSSCSCCCGGGEEEESBTTCEEEC
T ss_pred cceehhhhcCCCccccchhhh-hhhhcCHHH----HHhhchhheehhhhcCCccCcccccCCCChhheEEeCCCCeEEEE
Confidence 567999999876655332211 011233232 3333 22344444322222 111 124889999987554 8889
Q ss_pred ccccccc
Q 011005 351 DFGTARL 357 (496)
Q Consensus 351 Dfg~~~~ 357 (496)
|-+.+..
T Consensus 231 Dhn~af~ 237 (342)
T 1cja_A 231 DSKIIPL 237 (342)
T ss_dssp SCCCCCC
T ss_pred cCCcccc
Confidence 9988843
Done!