Query 011007
Match_columns 496
No_of_seqs 291 out of 1991
Neff 7.1
Searched_HMMs 46136
Date Fri Mar 29 07:03:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011007.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/011007hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02192 3-ketoacyl-CoA syntha 100.0 5E-120 1E-124 958.6 41.6 496 1-496 15-511 (511)
2 PLN02854 3-ketoacyl-CoA syntha 100.0 2E-117 3E-122 941.7 46.1 492 1-492 22-520 (521)
3 PLN02377 3-ketoacyl-CoA syntha 100.0 5E-115 1E-119 923.0 45.5 490 1-490 11-500 (502)
4 PLN02932 3-ketoacyl-CoA syntha 100.0 7E-109 1E-113 871.4 43.8 469 22-490 2-476 (478)
5 PLN00415 3-ketoacyl-CoA syntha 100.0 4.2E-99 9E-104 788.1 43.4 430 61-490 33-465 (466)
6 PF08392 FAE1_CUT1_RppA: FAE1/ 100.0 2.1E-77 4.6E-82 588.5 26.7 290 80-369 1-290 (290)
7 COG0332 FabH 3-oxoacyl-[acyl-c 100.0 4.1E-57 8.8E-62 455.8 24.0 317 86-468 2-323 (323)
8 cd00831 CHS_like Chalcone and 100.0 6.1E-52 1.3E-56 430.4 31.5 346 88-465 2-361 (361)
9 PLN03172 chalcone synthase fam 100.0 2.1E-51 4.5E-56 429.4 33.1 347 86-468 15-387 (393)
10 PLN03168 chalcone synthase; Pr 100.0 1.7E-50 3.8E-55 422.4 33.0 348 86-470 14-388 (389)
11 PLN03169 chalcone synthase fam 100.0 1.6E-50 3.5E-55 423.3 32.8 352 82-468 16-389 (391)
12 PLN03173 chalcone synthase; Pr 100.0 1.9E-50 4.2E-55 421.8 32.0 349 86-470 15-389 (391)
13 PLN03171 chalcone synthase-lik 100.0 3.7E-49 8E-54 413.9 33.7 353 85-470 20-397 (399)
14 PLN03170 chalcone synthase; Pr 100.0 3.6E-49 7.9E-54 413.7 31.0 350 86-470 19-393 (401)
15 PRK05963 3-oxoacyl-(acyl carri 100.0 9.8E-49 2.1E-53 400.7 30.2 323 86-467 2-326 (326)
16 COG3424 BcsA Predicted naringe 100.0 5.5E-48 1.2E-52 375.1 27.1 346 88-469 2-354 (356)
17 PRK12880 3-oxoacyl-(acyl carri 100.0 1.1E-47 2.5E-52 397.0 28.8 330 84-469 4-340 (353)
18 PLN02326 3-oxoacyl-[acyl-carri 100.0 2.6E-47 5.6E-52 398.2 29.1 328 86-467 46-379 (379)
19 PRK07204 3-oxoacyl-(acyl carri 100.0 6E-46 1.3E-50 380.6 31.2 312 86-467 3-329 (329)
20 PRK12879 3-oxoacyl-(acyl carri 100.0 7.9E-46 1.7E-50 378.6 31.4 317 86-467 3-324 (325)
21 CHL00203 fabH 3-oxoacyl-acyl-c 100.0 3.1E-46 6.7E-51 382.6 26.5 322 87-467 2-325 (326)
22 PRK09258 3-oxoacyl-(acyl carri 100.0 3.6E-45 7.8E-50 376.1 29.9 320 86-467 4-338 (338)
23 cd00830 KAS_III Ketoacyl-acyl 100.0 2.2E-44 4.7E-49 366.7 29.7 319 87-465 1-320 (320)
24 PRK06840 hypothetical protein; 100.0 3.6E-44 7.8E-49 369.0 31.0 327 85-468 2-336 (339)
25 TIGR00747 fabH 3-oxoacyl-(acyl 100.0 3.4E-44 7.5E-49 365.7 28.9 310 87-467 2-318 (318)
26 PRK09352 3-oxoacyl-(acyl carri 100.0 1.5E-42 3.2E-47 353.7 30.5 309 87-467 3-318 (319)
27 PRK06816 3-oxoacyl-(acyl carri 100.0 5E-42 1.1E-46 358.3 30.7 346 87-468 2-378 (378)
28 PRK04262 hypothetical protein; 100.0 2.4E-42 5.3E-47 356.8 27.4 310 87-472 2-313 (347)
29 TIGR00748 HMG_CoA_syn_Arc hydr 100.0 2.7E-42 5.8E-47 356.1 23.5 318 88-484 2-322 (345)
30 PRK07515 3-oxoacyl-(acyl carri 100.0 1.7E-40 3.6E-45 346.2 29.2 345 87-467 2-371 (372)
31 cd00827 init_cond_enzymes "ini 100.0 8.5E-40 1.8E-44 333.5 23.9 321 87-465 1-324 (324)
32 TIGR01835 HMG-CoA-S_prok 3-hyd 100.0 2E-36 4.3E-41 316.1 26.0 304 88-469 1-319 (379)
33 PLN02577 hydroxymethylglutaryl 100.0 1.6E-34 3.4E-39 305.3 24.6 311 84-469 1-372 (459)
34 TIGR01833 HMG-CoA-S_euk 3-hydr 100.0 5.4E-32 1.2E-36 285.7 20.7 316 87-470 1-376 (454)
35 COG3425 PksG 3-hydroxy-3-methy 100.0 2.4E-31 5.3E-36 269.7 23.1 309 87-472 2-315 (377)
36 PF00195 Chal_sti_synt_N: Chal 100.0 7E-32 1.5E-36 259.6 14.4 203 82-286 9-226 (226)
37 cd00327 cond_enzymes Condensin 100.0 6.2E-28 1.3E-32 237.2 16.4 237 162-465 7-254 (254)
38 cd00825 decarbox_cond_enzymes 99.9 2.5E-25 5.4E-30 227.4 14.4 251 162-465 11-332 (332)
39 PF08541 ACP_syn_III_C: 3-Oxoa 99.8 7.9E-20 1.7E-24 152.4 6.4 83 382-467 8-90 (90)
40 PF02797 Chal_sti_synt_C: Chal 99.8 5.6E-19 1.2E-23 161.1 12.5 119 322-468 24-150 (151)
41 PF01154 HMG_CoA_synt_N: Hydro 99.8 5.8E-19 1.3E-23 162.6 12.6 168 84-286 1-173 (174)
42 PRK06147 3-oxoacyl-(acyl carri 99.7 2.8E-16 6E-21 162.7 18.0 309 87-469 4-344 (348)
43 TIGR02845 spore_V_AD stage V s 99.7 1.2E-15 2.6E-20 153.1 20.7 116 162-287 50-173 (327)
44 KOG1393 Hydroxymethylglutaryl- 99.7 1.9E-15 4.1E-20 151.5 16.9 326 83-472 7-381 (462)
45 PRK08304 stage V sporulation p 99.6 1.8E-13 3.8E-18 138.0 19.7 117 162-287 56-179 (337)
46 cd00751 thiolase Thiolase are 99.5 1E-12 2.3E-17 138.0 20.6 93 162-255 22-115 (386)
47 cd00834 KAS_I_II Beta-ketoacyl 99.5 4.4E-12 9.5E-17 133.5 22.8 121 161-287 70-243 (406)
48 PF08545 ACP_syn_III: 3-Oxoacy 99.4 2.1E-13 4.5E-18 111.4 6.5 79 217-307 1-79 (80)
49 PRK05656 acetyl-CoA acetyltran 99.4 1.8E-11 3.8E-16 129.0 20.8 94 162-256 26-120 (393)
50 PRK09051 beta-ketothiolase; Pr 99.4 2.4E-11 5.1E-16 128.0 21.1 94 162-256 27-122 (394)
51 PRK08313 acetyl-CoA acetyltran 99.4 4.8E-11 1E-15 125.4 21.5 92 162-255 24-117 (386)
52 PRK06064 acetyl-CoA acetyltran 99.4 5.1E-11 1.1E-15 125.3 21.2 92 162-255 22-116 (389)
53 PRK09052 acetyl-CoA acetyltran 99.3 6.5E-11 1.4E-15 124.9 20.3 94 162-256 31-127 (399)
54 cd00829 SCP-x_thiolase Thiolas 99.3 9.7E-11 2.1E-15 122.4 21.6 93 162-256 16-109 (375)
55 smart00825 PKS_KS Beta-ketoacy 99.3 8.4E-11 1.8E-15 124.7 19.5 121 162-287 87-247 (424)
56 PRK06501 3-oxoacyl-(acyl carri 99.3 8.8E-10 1.9E-14 117.3 24.6 119 162-287 75-257 (425)
57 PRK12404 stage V sporulation p 99.2 4.7E-10 1E-14 112.8 19.1 117 162-287 54-177 (334)
58 cd00828 elong_cond_enzymes "el 99.2 3.1E-10 6.7E-15 119.8 18.5 123 161-287 71-243 (407)
59 cd00833 PKS polyketide synthas 99.2 1.6E-09 3.5E-14 114.5 23.4 120 162-287 87-247 (421)
60 TIGR03150 fabF beta-ketoacyl-a 99.2 9E-10 2E-14 116.2 21.1 120 162-286 71-242 (407)
61 PRK06445 acetyl-CoA acetyltran 99.2 6.3E-10 1.4E-14 117.3 19.7 91 162-255 32-126 (394)
62 PRK06025 acetyl-CoA acetyltran 99.2 8E-10 1.7E-14 116.4 18.7 94 162-256 29-124 (417)
63 PRK06690 acetyl-CoA acetyltran 99.2 1.6E-09 3.5E-14 112.7 19.1 90 162-256 25-114 (361)
64 PRK06158 thiolase; Provisional 99.2 3.6E-09 7.8E-14 111.2 21.2 87 162-253 28-115 (384)
65 PRK07314 3-oxoacyl-(acyl carri 99.1 7.1E-09 1.5E-13 109.7 23.5 120 162-286 72-243 (411)
66 TIGR01930 AcCoA-C-Actrans acet 99.1 1.9E-10 4.1E-15 121.0 10.8 94 162-256 21-115 (386)
67 PRK07108 acetyl-CoA acetyltran 99.1 2.4E-10 5.2E-15 120.3 11.5 94 162-256 27-122 (392)
68 PRK07103 polyketide beta-ketoa 99.1 9.9E-09 2.2E-13 108.8 20.4 121 162-287 80-251 (410)
69 PRK08256 lipid-transfer protei 99.1 1.1E-08 2.4E-13 107.7 20.7 89 162-255 22-111 (391)
70 PRK06205 acetyl-CoA acetyltran 99.1 5.4E-10 1.2E-14 118.2 10.3 94 162-256 26-120 (404)
71 PLN02644 acetyl-CoA C-acetyltr 99.1 1.5E-08 3.1E-13 107.0 20.8 93 162-255 25-118 (394)
72 PRK08235 acetyl-CoA acetyltran 99.1 6.7E-10 1.5E-14 117.0 10.6 94 162-256 26-120 (393)
73 PRK08242 acetyl-CoA acetyltran 99.0 9.6E-10 2.1E-14 115.9 11.2 94 162-256 28-123 (402)
74 PRK08722 3-oxoacyl-(acyl carri 99.0 5.4E-08 1.2E-12 103.3 24.0 120 162-287 74-246 (414)
75 PRK06333 3-oxoacyl-(acyl carri 99.0 2.8E-08 6E-13 105.7 21.2 120 162-286 82-255 (424)
76 PRK12578 acetyl-CoA acetyltran 99.0 1.3E-09 2.9E-14 114.5 10.9 93 162-256 21-114 (385)
77 PRK06059 lipid-transfer protei 99.0 1.4E-09 3.1E-14 114.8 10.3 93 162-256 23-117 (399)
78 PRK08439 3-oxoacyl-(acyl carri 99.0 1.1E-07 2.4E-12 100.8 24.1 118 162-286 72-243 (406)
79 PRK08170 acetyl-CoA acetyltran 99.0 2.9E-09 6.4E-14 113.3 11.0 94 162-256 27-121 (426)
80 cd00826 nondecarbox_cond_enzym 98.9 3.7E-09 8E-14 111.4 10.8 93 162-256 23-117 (393)
81 PRK05790 putative acyltransfer 98.9 5.3E-09 1.1E-13 110.3 10.9 94 162-256 26-120 (393)
82 PRK06954 acetyl-CoA acetyltran 98.9 5.3E-09 1.1E-13 110.4 10.7 94 162-256 31-125 (397)
83 PRK06065 acetyl-CoA acetyltran 98.9 8.2E-09 1.8E-13 108.7 10.8 91 162-254 29-121 (392)
84 PRK09185 3-oxoacyl-(acyl carri 98.9 8.3E-07 1.8E-11 93.6 25.6 205 198-467 137-390 (392)
85 PF00108 Thiolase_N: Thiolase, 98.9 1.1E-08 2.4E-13 102.1 10.4 94 162-256 26-120 (264)
86 PRK09116 3-oxoacyl-(acyl carri 98.9 4.8E-07 1E-11 95.9 23.0 119 162-286 73-244 (405)
87 PRK05952 3-oxoacyl-(acyl carri 98.8 3.1E-07 6.6E-12 96.5 20.5 243 165-466 59-380 (381)
88 PTZ00050 3-oxoacyl-acyl carrie 98.8 1.3E-07 2.9E-12 100.6 17.3 250 162-467 77-420 (421)
89 PLN02787 3-oxoacyl-[acyl-carri 98.8 1.5E-06 3.2E-11 95.0 25.3 119 162-286 199-372 (540)
90 PRK07661 acetyl-CoA acetyltran 98.8 2.4E-08 5.3E-13 105.2 10.9 94 162-256 27-122 (391)
91 PRK07967 3-oxoacyl-(acyl carri 98.8 7.8E-07 1.7E-11 94.3 22.1 186 86-286 2-243 (406)
92 cd00832 CLF Chain-length facto 98.8 1.2E-06 2.5E-11 92.7 22.8 120 162-287 71-241 (399)
93 PRK07516 acetyl-CoA acetyltran 98.7 3.7E-08 8.1E-13 103.7 10.5 93 162-256 22-117 (389)
94 PLN02287 3-ketoacyl-CoA thiola 98.7 4.7E-08 1E-12 104.7 10.9 94 162-256 71-166 (452)
95 PLN02836 3-oxoacyl-[acyl-carri 98.7 1.9E-06 4.1E-11 92.2 23.3 120 162-286 93-266 (437)
96 PRK13359 beta-ketoadipyl CoA t 98.7 5.6E-08 1.2E-12 102.6 11.1 94 162-256 26-122 (400)
97 PRK08963 fadI 3-ketoacyl-CoA t 98.7 4.4E-08 9.5E-13 104.4 10.3 94 162-256 29-123 (428)
98 PRK08257 acetyl-CoA acetyltran 98.7 1.7E-06 3.8E-11 93.8 22.7 92 162-255 27-120 (498)
99 PRK07851 acetyl-CoA acetyltran 98.7 6.5E-08 1.4E-12 102.4 10.9 93 162-256 27-122 (406)
100 PRK07910 3-oxoacyl-(acyl carri 98.7 2.1E-06 4.5E-11 91.4 21.9 314 86-466 12-416 (418)
101 PRK06289 acetyl-CoA acetyltran 98.7 5.8E-08 1.3E-12 102.8 9.8 91 162-256 26-122 (403)
102 PRK07850 acetyl-CoA acetyltran 98.7 1E-07 2.3E-12 100.3 11.1 94 162-256 26-121 (387)
103 PRK09050 beta-ketoadipyl CoA t 98.7 9.9E-08 2.2E-12 100.8 10.6 94 162-256 26-122 (401)
104 PRK06633 acetyl-CoA acetyltran 98.7 7.1E-08 1.5E-12 101.6 9.4 94 162-256 27-121 (392)
105 PRK08131 acetyl-CoA acetyltran 98.7 1.3E-07 2.9E-12 99.8 11.2 94 162-256 26-121 (401)
106 TIGR02430 pcaF beta-ketoadipyl 98.6 1.6E-07 3.4E-12 99.2 10.7 94 162-256 25-121 (400)
107 PRK06366 acetyl-CoA acetyltran 98.6 1.7E-07 3.6E-12 98.8 10.7 94 162-256 26-120 (388)
108 TIGR02446 FadI fatty oxidation 98.6 1.6E-07 3.5E-12 100.0 9.8 94 162-256 31-125 (430)
109 PRK06504 acetyl-CoA acetyltran 98.6 3.2E-07 6.9E-12 96.6 11.0 94 162-256 26-121 (390)
110 PRK06157 acetyl-CoA acetyltran 98.6 2.9E-07 6.3E-12 97.3 10.7 93 162-256 27-120 (398)
111 PF00109 ketoacyl-synt: Beta-k 98.6 2.4E-07 5.2E-12 91.2 9.5 119 162-285 87-251 (254)
112 PRK08947 fadA 3-ketoacyl-CoA t 98.5 3E-07 6.5E-12 96.8 9.9 94 162-256 27-123 (387)
113 PTZ00455 3-ketoacyl-CoA thiola 98.5 5.7E-07 1.2E-11 96.1 11.2 94 162-256 48-152 (438)
114 PRK06365 acetyl-CoA acetyltran 98.5 4.7E-07 1E-11 96.6 10.3 93 162-256 37-131 (430)
115 PRK14691 3-oxoacyl-(acyl carri 98.5 1.5E-05 3.3E-10 82.6 20.5 119 162-287 4-174 (342)
116 TIGR02445 fadA fatty oxidation 98.5 4.4E-07 9.6E-12 95.4 9.1 94 162-256 25-121 (385)
117 PRK06519 3-oxoacyl-(acyl carri 98.5 7.5E-06 1.6E-10 86.5 18.3 119 162-287 73-255 (398)
118 PRK09268 acetyl-CoA acetyltran 98.4 1.2E-06 2.7E-11 93.3 10.8 94 162-256 31-125 (427)
119 PRK07801 acetyl-CoA acetyltran 98.4 1.3E-06 2.9E-11 91.8 10.0 94 162-256 26-121 (382)
120 TIGR02813 omega_3_PfaA polyket 98.3 5.7E-05 1.2E-09 95.1 22.2 215 200-469 185-463 (2582)
121 PRK07937 lipid-transfer protei 98.2 0.00017 3.6E-09 75.1 20.4 88 163-255 25-114 (352)
122 PRK08142 acetyl-CoA acetyltran 98.2 6.6E-06 1.4E-10 86.7 9.7 89 162-255 25-113 (388)
123 PRK07855 lipid-transfer protei 98.0 2.8E-05 6.2E-10 81.9 10.0 85 162-251 24-108 (386)
124 COG0304 FabB 3-oxoacyl-(acyl-c 97.9 0.00053 1.1E-08 72.7 17.2 120 161-287 70-244 (412)
125 PF07451 SpoVAD: Stage V sporu 97.8 0.00024 5.3E-09 71.0 11.9 117 163-288 52-175 (329)
126 PRK06066 acetyl-CoA acetyltran 97.8 0.00012 2.7E-09 77.0 10.5 89 162-255 25-116 (385)
127 COG0183 PaaJ Acetyl-CoA acetyl 97.7 0.00014 2.9E-09 76.9 9.4 95 162-257 27-125 (392)
128 KOG1390 Acetyl-CoA acetyltrans 97.4 0.00039 8.5E-09 69.7 7.3 94 162-256 30-124 (396)
129 COG3321 Polyketide synthase mo 97.4 0.0065 1.4E-07 71.8 17.9 121 163-286 92-250 (1061)
130 PF08540 HMG_CoA_synt_C: Hydro 97.2 0.00033 7.2E-09 70.4 4.0 61 411-471 143-205 (282)
131 KOG1389 3-oxoacyl CoA thiolase 97.2 0.011 2.3E-07 59.4 14.3 95 162-257 61-156 (435)
132 KOG1406 Peroxisomal 3-ketoacyl 96.9 0.0016 3.4E-08 63.9 5.4 89 163-256 30-119 (408)
133 KOG1391 Acetyl-CoA acetyltrans 95.6 0.024 5.2E-07 55.6 5.8 92 162-256 28-123 (396)
134 PF08541 ACP_syn_III_C: 3-Oxoa 95.5 0.018 3.9E-07 47.5 4.2 75 174-252 1-78 (90)
135 KOG1394 3-oxoacyl-(acyl-carrie 95.5 0.16 3.4E-06 52.3 11.5 119 161-287 93-269 (440)
136 PRK06816 3-oxoacyl-(acyl carri 94.4 0.22 4.9E-06 52.3 9.8 88 162-253 270-365 (378)
137 TIGR00748 HMG_CoA_syn_Arc hydr 94.3 0.16 3.5E-06 52.7 8.5 83 162-250 206-293 (345)
138 PRK06025 acetyl-CoA acetyltran 93.9 0.21 4.5E-06 53.3 8.2 91 167-284 318-416 (417)
139 PRK05963 3-oxoacyl-(acyl carri 93.6 0.19 4.2E-06 51.4 7.4 89 159-251 222-313 (326)
140 KOG1392 Acetyl-CoA acetyltrans 93.5 0.074 1.6E-06 52.9 3.8 94 162-256 66-160 (465)
141 PRK09258 3-oxoacyl-(acyl carri 93.5 0.3 6.6E-06 50.1 8.5 88 159-253 234-327 (338)
142 PRK07204 3-oxoacyl-(acyl carri 93.0 0.29 6.3E-06 50.1 7.5 83 161-250 227-315 (329)
143 PF13723 Ketoacyl-synt_2: Beta 92.6 2.2 4.9E-05 41.4 12.6 114 162-287 34-172 (218)
144 TIGR00747 fabH 3-oxoacyl-(acyl 92.6 0.4 8.8E-06 48.7 7.9 84 161-251 216-305 (318)
145 cd00825 decarbox_cond_enzymes 92.5 0.55 1.2E-05 47.8 8.7 78 164-241 205-286 (332)
146 PRK12879 3-oxoacyl-(acyl carri 92.2 0.63 1.4E-05 47.4 8.8 84 161-251 222-311 (325)
147 PRK04262 hypothetical protein; 91.6 0.45 9.7E-06 49.4 6.9 68 164-235 209-281 (347)
148 PRK06840 hypothetical protein; 91.5 0.63 1.4E-05 47.9 7.9 81 164-251 237-322 (339)
149 PLN02326 3-oxoacyl-[acyl-carri 91.4 0.56 1.2E-05 49.3 7.5 84 161-251 277-366 (379)
150 cd00830 KAS_III Ketoacyl-acyl 91.1 0.8 1.7E-05 46.4 8.1 85 160-251 219-309 (320)
151 CHL00203 fabH 3-oxoacyl-acyl-c 90.4 1.1 2.4E-05 45.8 8.4 81 164-251 226-312 (326)
152 PRK07515 3-oxoacyl-(acyl carri 90.4 0.95 2.1E-05 47.4 8.0 86 160-251 267-358 (372)
153 cd00327 cond_enzymes Condensin 90.3 1.3 2.9E-05 43.0 8.5 78 164-241 145-226 (254)
154 PRK09352 3-oxoacyl-(acyl carri 90.1 1.2 2.7E-05 45.1 8.4 84 161-251 216-305 (319)
155 PRK09050 beta-ketoadipyl CoA t 90.0 0.85 1.8E-05 48.5 7.3 94 166-284 299-400 (401)
156 PRK13359 beta-ketoadipyl CoA t 89.3 1 2.2E-05 47.9 7.3 94 166-284 298-399 (400)
157 PRK08242 acetyl-CoA acetyltran 88.9 1 2.2E-05 47.8 7.0 91 167-284 303-401 (402)
158 PRK06366 acetyl-CoA acetyltran 88.8 1.2 2.7E-05 47.0 7.5 75 166-247 287-369 (388)
159 PRK06504 acetyl-CoA acetyltran 88.1 3.4 7.4E-05 43.7 10.2 58 382-440 305-365 (390)
160 PRK05790 putative acyltransfer 87.9 3 6.6E-05 44.0 9.8 84 382-466 308-391 (393)
161 TIGR01930 AcCoA-C-Actrans acet 87.7 1.9 4.1E-05 45.5 8.0 83 382-465 303-385 (386)
162 PRK06954 acetyl-CoA acetyltran 87.7 2.4 5.2E-05 44.9 8.8 84 382-467 312-396 (397)
163 PRK07661 acetyl-CoA acetyltran 87.6 2.7 5.9E-05 44.5 9.1 84 382-467 306-390 (391)
164 TIGR02430 pcaF beta-ketoadipyl 87.2 1.3 2.7E-05 47.2 6.3 70 166-239 298-375 (400)
165 PRK06147 3-oxoacyl-(acyl carri 87.1 1.5 3.2E-05 45.7 6.7 88 165-252 235-330 (348)
166 COG0332 FabH 3-oxoacyl-[acyl-c 86.9 1.3 2.9E-05 45.6 6.1 53 157-213 216-268 (323)
167 PF02803 Thiolase_C: Thiolase, 86.6 2.9 6.4E-05 36.9 7.3 70 166-241 24-101 (123)
168 PRK07801 acetyl-CoA acetyltran 86.2 2.8 6.1E-05 44.1 8.3 84 382-466 297-380 (382)
169 PRK07850 acetyl-CoA acetyltran 86.0 4.3 9.3E-05 42.9 9.6 92 166-284 287-386 (387)
170 PRK06445 acetyl-CoA acetyltran 85.8 2.8 6E-05 44.4 8.1 67 166-238 294-368 (394)
171 PRK07851 acetyl-CoA acetyltran 85.4 3.2 6.9E-05 44.2 8.3 85 382-467 320-404 (406)
172 cd00831 CHS_like Chalcone and 85.2 2.5 5.3E-05 44.0 7.2 87 161-251 256-350 (361)
173 PRK09052 acetyl-CoA acetyltran 84.2 2.2 4.8E-05 45.3 6.4 93 165-284 298-398 (399)
174 PLN02287 3-ketoacyl-CoA thiola 84.2 5.1 0.00011 43.3 9.2 90 382-473 348-440 (452)
175 PRK09051 beta-ketothiolase; Pr 84.1 2.8 6.1E-05 44.4 7.1 92 166-284 294-393 (394)
176 COG3425 PksG 3-hydroxy-3-methy 83.7 4.1 8.9E-05 42.7 7.9 95 162-284 207-308 (377)
177 PRK07108 acetyl-CoA acetyltran 83.3 4.2 9E-05 43.1 8.0 55 382-437 307-361 (392)
178 PRK12880 3-oxoacyl-(acyl carri 82.9 2.9 6.3E-05 43.6 6.6 70 161-234 239-312 (353)
179 PLN03169 chalcone synthase fam 82.8 3.9 8.4E-05 43.3 7.6 87 162-250 279-374 (391)
180 PRK06205 acetyl-CoA acetyltran 82.1 7.4 0.00016 41.4 9.4 85 382-468 315-403 (404)
181 PRK06690 acetyl-CoA acetyltran 81.5 4.6 0.0001 42.3 7.4 70 165-240 259-336 (361)
182 PRK05656 acetyl-CoA acetyltran 81.3 3.3 7.2E-05 43.8 6.4 93 166-285 293-393 (393)
183 COG1214 Inactive homolog of me 81.1 5.8 0.00013 38.6 7.5 59 163-221 38-97 (220)
184 PRK06633 acetyl-CoA acetyltran 79.8 8 0.00017 41.0 8.6 51 382-435 307-359 (392)
185 PRK08257 acetyl-CoA acetyltran 79.8 5.9 0.00013 43.4 7.8 80 166-250 294-382 (498)
186 PRK08947 fadA 3-ketoacyl-CoA t 79.7 4.1 8.8E-05 43.1 6.4 70 166-239 284-362 (387)
187 PRK08235 acetyl-CoA acetyltran 79.5 5.9 0.00013 42.0 7.6 83 382-466 308-391 (393)
188 cd00827 init_cond_enzymes "ini 79.0 7.1 0.00015 39.5 7.8 92 158-253 217-315 (324)
189 TIGR01835 HMG-CoA-S_prok 3-hyd 77.5 6.7 0.00014 41.3 7.2 73 161-234 202-286 (379)
190 cd00751 thiolase Thiolase are 76.8 5.1 0.00011 42.2 6.1 42 166-211 287-328 (386)
191 PRK08963 fadI 3-ketoacyl-CoA t 75.5 15 0.00033 39.3 9.4 85 382-467 326-427 (428)
192 PRK09268 acetyl-CoA acetyltran 74.7 12 0.00027 40.1 8.4 26 165-190 310-335 (427)
193 PF02801 Ketoacyl-synt_C: Beta 73.5 1.4 2.9E-05 38.4 0.6 76 166-241 27-110 (119)
194 TIGR02445 fadA fatty oxidation 73.1 35 0.00077 36.0 11.3 82 382-467 297-384 (385)
195 PRK09185 3-oxoacyl-(acyl carri 72.2 17 0.00037 38.4 8.7 45 166-210 262-307 (392)
196 cd00829 SCP-x_thiolase Thiolas 71.9 16 0.00034 38.1 8.3 44 165-212 252-295 (375)
197 TIGR03725 bact_YeaZ universal 71.9 6.8 0.00015 37.4 5.1 55 162-220 33-92 (202)
198 TIGR00329 gcp_kae1 metallohydr 71.8 14 0.0003 37.7 7.6 36 163-198 49-84 (305)
199 PRK09604 UGMP family protein; 71.5 18 0.00038 37.4 8.4 49 162-210 51-104 (332)
200 PRK06064 acetyl-CoA acetyltran 71.2 15 0.00032 38.8 7.9 41 166-211 260-301 (389)
201 PLN02644 acetyl-CoA C-acetyltr 70.8 9.1 0.0002 40.5 6.2 66 167-238 294-367 (394)
202 PRK12578 acetyl-CoA acetyltran 69.7 36 0.00079 35.7 10.5 57 382-439 274-348 (385)
203 PRK07516 acetyl-CoA acetyltran 69.1 11 0.00024 39.7 6.4 70 166-239 262-355 (389)
204 PRK06059 lipid-transfer protei 69.0 25 0.00054 37.2 9.1 41 167-211 276-316 (399)
205 PRK08256 lipid-transfer protei 68.4 17 0.00036 38.4 7.6 43 166-212 266-308 (391)
206 cd00834 KAS_I_II Beta-ketoacyl 68.3 9.6 0.00021 40.0 5.8 77 165-241 276-358 (406)
207 PRK08131 acetyl-CoA acetyltran 67.3 13 0.00029 39.5 6.6 70 166-240 298-376 (401)
208 PRK14878 UGMP family protein; 66.9 12 0.00025 38.6 5.9 51 159-210 42-97 (323)
209 PRK07314 3-oxoacyl-(acyl carri 65.0 12 0.00025 39.6 5.6 45 166-210 278-323 (411)
210 PF00814 Peptidase_M22: Glycop 64.9 10 0.00022 37.9 4.9 54 163-220 30-88 (268)
211 TIGR03150 fabF beta-ketoacyl-a 64.9 12 0.00026 39.4 5.7 45 166-210 277-322 (407)
212 PF01135 PCMT: Protein-L-isoas 64.7 9.3 0.0002 36.9 4.4 41 422-462 49-89 (209)
213 cd00826 nondecarbox_cond_enzym 64.3 16 0.00035 38.7 6.5 70 166-239 271-364 (393)
214 PRK14691 3-oxoacyl-(acyl carri 63.0 20 0.00044 37.2 6.9 46 165-210 207-253 (342)
215 cd00828 elong_cond_enzymes "el 62.7 14 0.00031 38.8 5.8 46 164-209 274-320 (407)
216 PRK08170 acetyl-CoA acetyltran 62.4 16 0.00035 39.1 6.2 25 166-190 309-333 (426)
217 PRK07937 lipid-transfer protei 61.6 30 0.00065 36.1 7.8 77 168-250 250-334 (352)
218 TIGR03723 bact_gcp putative gl 61.5 28 0.0006 35.7 7.5 56 162-221 49-109 (314)
219 PTZ00455 3-ketoacyl-CoA thiola 61.5 24 0.00051 38.0 7.2 43 166-212 311-353 (438)
220 PRK06519 3-oxoacyl-(acyl carri 60.8 27 0.00058 37.1 7.4 71 165-239 281-353 (398)
221 smart00825 PKS_KS Beta-ketoacy 59.7 27 0.00059 36.9 7.3 46 165-210 280-326 (424)
222 PTZ00050 3-oxoacyl-acyl carrie 59.5 28 0.00061 37.1 7.4 46 165-210 284-331 (421)
223 TIGR03722 arch_KAE1 universal 59.2 17 0.00036 37.4 5.4 36 159-195 43-78 (322)
224 PRK07855 lipid-transfer protei 59.1 39 0.00084 35.7 8.3 24 167-190 269-292 (386)
225 COG0304 FabB 3-oxoacyl-(acyl-c 59.1 19 0.00041 38.5 5.9 74 166-240 278-356 (412)
226 PRK06289 acetyl-CoA acetyltran 59.0 43 0.00092 35.5 8.6 43 166-212 278-320 (403)
227 PRK06158 thiolase; Provisional 58.2 36 0.00079 35.8 7.9 41 166-211 256-297 (384)
228 TIGR01796 CM_mono_aroH monofun 57.3 21 0.00046 31.2 4.8 54 169-226 25-81 (117)
229 PLN02787 3-oxoacyl-[acyl-carri 57.1 29 0.00063 38.5 7.1 45 166-210 407-452 (540)
230 PLN03170 chalcone synthase; Pr 57.0 24 0.00052 37.5 6.3 71 161-235 278-354 (401)
231 TIGR02446 FadI fatty oxidation 56.8 57 0.0012 35.0 9.1 57 382-439 328-401 (430)
232 COG4126 Hydantoin racemase [Am 56.6 80 0.0017 30.8 9.0 101 120-241 118-218 (230)
233 COG0533 QRI7 Metal-dependent p 55.3 59 0.0013 33.8 8.5 84 164-253 52-137 (342)
234 PRK05952 3-oxoacyl-(acyl carri 55.1 22 0.00048 37.5 5.6 45 165-209 255-300 (381)
235 PRK06365 acetyl-CoA acetyltran 55.0 57 0.0012 35.0 8.8 41 166-211 295-338 (430)
236 cd00832 CLF Chain-length facto 54.8 24 0.00053 37.3 5.9 46 165-210 271-317 (399)
237 PF02803 Thiolase_C: Thiolase, 54.1 19 0.00041 31.8 4.1 83 382-466 39-122 (123)
238 KOG2708 Predicted metalloprote 54.1 32 0.0007 33.7 5.9 86 164-255 51-137 (336)
239 PLN03173 chalcone synthase; Pr 53.7 32 0.00069 36.5 6.5 71 161-235 274-350 (391)
240 PRK06501 3-oxoacyl-(acyl carri 53.5 34 0.00074 36.5 6.8 44 166-209 291-335 (425)
241 PRK08313 acetyl-CoA acetyltran 53.4 61 0.0013 34.2 8.6 42 165-211 256-300 (386)
242 PRK06333 3-oxoacyl-(acyl carri 53.1 58 0.0013 34.5 8.5 45 165-209 289-334 (424)
243 PTZ00340 O-sialoglycoprotein e 52.4 53 0.0012 34.3 7.7 55 163-221 50-109 (345)
244 PRK09605 bifunctional UGMP fam 51.7 27 0.00059 38.4 5.9 84 158-253 45-134 (535)
245 KOG2707 Predicted metalloprote 50.5 42 0.00092 34.9 6.4 49 163-211 83-136 (405)
246 PRK08722 3-oxoacyl-(acyl carri 50.5 35 0.00076 36.4 6.3 45 166-210 280-325 (414)
247 TIGR02845 spore_V_AD stage V s 50.2 74 0.0016 32.9 8.2 87 166-254 204-305 (327)
248 KOG1389 3-oxoacyl CoA thiolase 49.0 40 0.00087 34.6 5.9 69 168-241 324-399 (435)
249 PRK08304 stage V sporulation p 48.8 76 0.0016 32.9 8.1 87 166-254 210-312 (337)
250 PRK09116 3-oxoacyl-(acyl carri 48.6 32 0.00068 36.6 5.6 45 166-210 277-322 (405)
251 cd02185 AroH Chorismate mutase 48.4 42 0.00091 29.4 5.2 55 169-226 25-81 (117)
252 PLN02836 3-oxoacyl-[acyl-carri 48.1 90 0.0019 33.5 9.0 44 166-209 301-345 (437)
253 PLN03171 chalcone synthase-lik 48.0 62 0.0013 34.3 7.7 71 160-235 275-360 (399)
254 PRK00768 nadE NAD synthetase; 47.5 2.9E+02 0.0062 27.8 11.8 32 198-231 89-120 (268)
255 cd00833 PKS polyketide synthas 47.0 46 0.00099 34.9 6.5 46 164-209 279-325 (421)
256 PRK07910 3-oxoacyl-(acyl carri 45.4 47 0.001 35.5 6.3 45 166-210 288-333 (418)
257 COG1153 FwdD Formylmethanofura 45.3 24 0.00051 31.0 3.2 51 428-485 31-88 (128)
258 PRK12404 stage V sporulation p 44.7 91 0.002 32.3 7.8 87 166-254 208-310 (334)
259 PLN03172 chalcone synthase fam 43.4 50 0.0011 35.0 6.0 69 162-234 275-349 (393)
260 KOG1406 Peroxisomal 3-ketoacyl 43.1 23 0.0005 35.4 3.1 29 162-190 270-298 (408)
261 PF07451 SpoVAD: Stage V sporu 43.0 25 0.00055 35.9 3.5 87 166-254 205-307 (329)
262 PRK06066 acetyl-CoA acetyltran 42.3 1E+02 0.0022 32.6 8.2 41 167-211 259-301 (385)
263 PRK06157 acetyl-CoA acetyltran 42.1 1.1E+02 0.0024 32.4 8.4 43 166-212 268-312 (398)
264 PF07736 CM_1: Chorismate muta 39.6 67 0.0015 28.2 5.1 51 167-221 23-76 (118)
265 PRK09585 anmK anhydro-N-acetyl 37.3 88 0.0019 32.9 6.6 66 155-220 62-137 (365)
266 PRK13410 molecular chaperone D 36.8 1.1E+02 0.0023 35.0 7.7 74 155-232 300-373 (668)
267 TIGR01743 purR_Bsub pur operon 34.6 4.3E+02 0.0094 26.6 10.8 49 77-140 10-58 (268)
268 PRK07103 polyketide beta-ketoa 32.2 1.1E+02 0.0023 32.5 6.5 27 167-193 284-311 (410)
269 KOG1394 3-oxoacyl-(acyl-carrie 31.4 60 0.0013 34.0 4.1 46 165-210 302-348 (440)
270 COG2518 Pcm Protein-L-isoaspar 30.8 56 0.0012 31.6 3.6 38 422-461 51-88 (209)
271 PF00195 Chal_sti_synt_N: Chal 30.7 78 0.0017 31.0 4.6 68 382-455 119-190 (226)
272 PRK05183 hscA chaperone protei 30.6 2.5E+02 0.0054 31.7 9.3 66 162-231 307-372 (616)
273 TIGR01991 HscA Fe-S protein as 30.4 2.7E+02 0.0058 31.3 9.5 49 162-211 291-339 (599)
274 KOG1391 Acetyl-CoA acetyltrans 29.3 71 0.0015 32.0 4.0 49 167-221 296-344 (396)
275 PLN03184 chloroplast Hsp70; Pr 28.4 1.7E+02 0.0037 33.3 7.6 66 163-232 345-410 (673)
276 CHL00094 dnaK heat shock prote 27.9 1.7E+02 0.0038 32.9 7.5 45 166-211 311-355 (621)
277 TIGR02350 prok_dnaK chaperone 26.6 1.7E+02 0.0037 32.6 7.1 74 155-232 296-369 (595)
278 PRK00290 dnaK molecular chaper 26.4 2E+02 0.0044 32.4 7.7 67 162-232 305-371 (627)
279 PF09269 DUF1967: Domain of un 26.4 79 0.0017 24.8 3.2 35 102-136 11-45 (69)
280 PTZ00186 heat shock 70 kDa pre 25.5 2.4E+02 0.0053 32.1 8.1 63 166-232 336-398 (657)
281 PRK08142 acetyl-CoA acetyltran 25.4 1E+02 0.0022 32.6 4.8 24 166-189 257-280 (388)
282 TIGR03595 Obg_CgtA_exten Obg f 24.3 1.5E+02 0.0032 23.3 4.3 35 102-136 11-45 (69)
283 COG3053 CitC Citrate lyase syn 24.0 4.4E+02 0.0096 27.1 8.5 106 84-209 209-314 (352)
284 COG2377 Predicted molecular ch 23.9 1.4E+02 0.003 31.4 5.3 67 154-220 63-141 (371)
285 PTZ00400 DnaK-type molecular c 23.7 1.3E+02 0.0029 34.1 5.6 45 166-211 350-394 (663)
286 KOG1390 Acetyl-CoA acetyltrans 23.6 86 0.0019 32.4 3.6 80 382-466 311-394 (396)
287 PLN02854 3-ketoacyl-CoA syntha 23.3 3.5E+02 0.0076 30.0 8.5 42 166-211 387-434 (521)
288 PRK13411 molecular chaperone D 23.1 2.2E+02 0.0047 32.4 7.2 46 164-210 308-353 (653)
289 cd01453 vWA_transcription_fact 23.0 2.2E+02 0.0048 26.5 6.1 81 166-253 29-117 (183)
290 PF12244 DUF3606: Protein of u 22.2 64 0.0014 24.4 1.8 30 394-426 19-48 (57)
291 PTZ00009 heat shock 70 kDa pro 22.0 2.6E+02 0.0056 31.8 7.5 64 166-232 315-378 (653)
292 KOG1202 Animal-type fatty acid 21.3 51 0.0011 39.7 1.6 123 163-288 88-248 (2376)
293 PRK08329 threonine synthase; V 21.1 75 0.0016 33.0 2.8 64 396-459 275-345 (347)
294 KOG1794 N-Acetylglucosamine ki 20.9 5.4E+02 0.012 26.5 8.5 129 132-286 29-165 (336)
295 TIGR03844 cysteate_syn cysteat 20.4 2.1E+02 0.0046 30.4 6.0 65 396-460 310-382 (398)
No 1
>PLN02192 3-ketoacyl-CoA synthase
Probab=100.00 E-value=5.4e-120 Score=958.59 Aligned_cols=496 Identities=64% Similarity=1.081 Sum_probs=475.6
Q ss_pred CCCCCCCccccccchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHH
Q 011007 1 MPQTLPDFSNSVKLKYVKLGYQYLVNHILYLLLVPIMVAILIEVLRLGPDEILNLWKSLHFDLVQILCSSFLIIFIATVY 80 (496)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (496)
+|++||||++|+|+||||+||||+++|.++++++|++++++.++.+++.+|+..+|..++.++++++.+++++++++++|
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (511)
T PLN02192 15 SSRKLPDFKKSVKLKYVKLGYHYLITHGMYLFLSPLVVVIAAQLSTFSIQDLHDLWEHLKFNLISVILCSTLLVFLSTLY 94 (511)
T ss_pred hhhhcchHHHhhhhhhhhhhhHHHHhhhHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 37899999999999999999999999999999999998889999999999998899888888888888888888889999
Q ss_pred HhcCCCceEEEEeeeecCCCCcccChHHHHHHHhhhhcCCcchHHHHHHHHHHcCCCceeecCCCCcCCCCCCchHHHHH
Q 011007 81 FMSKPRHVYLVDYACYKPPVTCRVPFATFMEHSRLILKNNPKSVEFQMRILERSGLGEETCLPPAIHYIPPTPTMEAARG 160 (496)
Q Consensus 81 ~~~~~~~v~Iv~~~~y~P~~~~~v~~~~~~e~~~~~~~~~~~~~~f~~~i~~~sGi~~r~~~~~~~~~~~~~~~~~~~~~ 160 (496)
+|+||++|||+||+||+|++.++++.+.++|+....+.|++++++||+||++|||+|++||+|+..++.|++.+|+++|+
T Consensus 95 ~~~~~~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~sglg~~t~~p~~~~~~~~~~~~~~~~~ 174 (511)
T PLN02192 95 FLTRPRPVYLVDFSCYKPDDSRKCTRKIFMDRSKLTGSFTEENLEFQRKILERSGLGESTYLPEAVLNVPPNPCMAEARK 174 (511)
T ss_pred HHcCCCcEEEEeeeeecCCccccccHHHHHHHHHHcCCCCHHHHHHHHHHHHhcCCCCcccCChhhccCCCCccHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCCceeeEecCCCcchHHHHHHHHHHHHhc
Q 011007 161 EAELVIFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLLQV 240 (496)
Q Consensus 161 ea~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL~~ 240 (496)
|+++++++|+++||+++|++|+|||+||++|++++++||++++|+++||+++++.+|||+||||+||++||++|+++|++
T Consensus 175 Ea~~~~~~Aa~~aL~kaGi~p~DIDiLIv~~S~~~~~PSlaa~I~n~lGlr~~i~afdLsgmGCSggl~aLdlA~~lL~a 254 (511)
T PLN02192 175 EAETVMFGAIDQLLAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNILSYNLGGMGCSAGLISIDLAKHLLQV 254 (511)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCchHHHHHHHHhCCCCCceEEEcccchhhhHHHHHHHHHHHHHc
Confidence 99999999999999999999999999999999999999999999999999989999999999999999999999999999
Q ss_pred CCCCEEEEEEECCCCCCCccCCCccccccccccccccEEEEEeccCCcccccceeEeeEEEEEecCCcccccceeecccC
Q 011007 241 HPNSNAVVVSTEIITPNYYQGNERAMLLPNCLFRMGGAAILLSNRRRNRSRAKYRLVHVVRTHKGADDKAYRCVFEEEDK 320 (496)
Q Consensus 241 ~~~~~aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAaA~lLs~~~~~~~~~~~~L~~~~~t~~~~d~~~~~~~~~~~d~ 320 (496)
+++++||||++|++|.+||.++||+++++|++|||||||+||++++.++.+++|+|.+.++++.++|++.|+|+++++|+
T Consensus 255 ~~~~~aLVVstE~~S~n~y~g~drs~lv~n~LFgDGAaAvLLs~~~~~~~~~k~~L~~~vrt~~~~dd~~~~~v~~~ed~ 334 (511)
T PLN02192 255 HPNSYALVISMENITLNWYFGNDRSMLVSNCLFRMGGAAILLSNKRSDRRRSKYQLVHTVRTHKGADDKCFACVTQEEDS 334 (511)
T ss_pred CCCCeEEEEEEEeccccCCCCCCHHHHhccccccccceEEEEeccccccccccceeeeeEEEEecCChhhccceeccccc
Confidence 99999999999999999999999999999999999999999999765555678999999999999999999999999999
Q ss_pred CCceeeeechhHHHHHHHHhhhhhhhcCCCccchhHHHHHHHHHHHHhhhccccCCcccchhccccEEEeccCCHHHHHH
Q 011007 321 EGKVGISLSKDLMAIAGEALKSNITTIGPLVLPASEQLLFLMTLIGRKIFNPKWKPYIPDFKQAFEHFCIHAGGRAVIDE 400 (496)
Q Consensus 321 ~G~~g~~ls~d~~~v~g~~l~~~i~~~gp~vlp~~e~~~~~~~~~~~~v~~~~~~~~~p~~~~did~f~~H~~~~~v~~~ 400 (496)
+|+.|+.|+||+|.++|++++.|++++||.++|.+|+.++++.|.++++++.+++.|+|+++++|||||+||+|+++++.
T Consensus 335 ~g~~g~~Lskdl~~vag~al~~ni~~l~p~vlp~~e~~~~~~~m~gr~vfk~~~~~~~p~~~~~Idhf~iHqggr~IId~ 414 (511)
T PLN02192 335 AGKIGVSLSKDLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVGKKLFKMKLKPYIPDFKLAFEHFCIHAGGRAVLDE 414 (511)
T ss_pred ccceeeEecchhhhhhhhhhhhhhhhcccccCccchhhceeEEEcChHHHHHHhhhccHHHHHhhceEeeccCCHHHHHH
Confidence 99999999999999999999999999999999999999888888899999988888999999999999999999999999
Q ss_pred HHHHcCCChhhHhhhhhhhcccCCccCCchHHHHHHHHHhCCCCCCCEEEEEeechhHhhhheeeEeeccCCCCC-CCCC
Q 011007 401 LQKNLQLSAEHVEASRMTLHRFGNTSSSSLWYEMSYIEEKGRMKKGDRVWQIAFGSGFKCNSAVWKCNKTIKTTT-DNPW 479 (496)
Q Consensus 401 i~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~i~~Gd~Vll~~fG~G~~~~sav~r~~~~~~~~~-~~~w 479 (496)
++++||++++++++|++++++||||||+|+||+|++++++|++++||+|||+|||+||+|+++||||++++++.. .|||
T Consensus 415 v~k~LgL~~~~~e~sr~tL~rfGNTSSaSI~~aL~~~eakgrik~GDrVl~iaFGsGf~~~sav~~~~~~~~~~~~~~~w 494 (511)
T PLN02192 415 LEKNLQLSDWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKKGDRTWQIAFGSGFKCNSAVWKALRTVNPAKEKNPW 494 (511)
T ss_pred HHHHcCCCchhhhHHHHHHhHcCChHHhHHHHHHHHHHHcCCCCCCCEEEEEEEcchHhhhhhheeeecccCCcccCCCc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999998754 4999
Q ss_pred cccccCCCCCCCcccCC
Q 011007 480 SDCIDRYPVHIPEIVKL 496 (496)
Q Consensus 480 ~~~~~~~p~~~~~~~~~ 496 (496)
+||||+|||++|.++.|
T Consensus 495 ~~~i~~yp~~~~~~~~~ 511 (511)
T PLN02192 495 MDEIHEFPVDVPKVSTI 511 (511)
T ss_pred hhhHHhCCCCCCCCCCC
Confidence 99999999999987654
No 2
>PLN02854 3-ketoacyl-CoA synthase
Probab=100.00 E-value=1.6e-117 Score=941.72 Aligned_cols=492 Identities=62% Similarity=1.052 Sum_probs=468.4
Q ss_pred CCCCCCCccccccchhhhhhhHHHHHHH---HHHHHHHHHHHHHHHHhhcChhHHHHHHHh--hhhhHHHHHHHHHHHHH
Q 011007 1 MPQTLPDFSNSVKLKYVKLGYQYLVNHI---LYLLLVPIMVAILIEVLRLGPDEILNLWKS--LHFDLVQILCSSFLIIF 75 (496)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 75 (496)
+|++||||++|+|+||||+||||+++|. ++++++|++++++.++.+++.+|+..+|.. +++++++++++++++++
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (521)
T PLN02854 22 IRQRLPDFLQSVKLKYVKLGYGYSCNPATILFFLIILPLTIATLVQITGLEFDTVSELWSNQALHLDTATRLTGSAFLLF 101 (521)
T ss_pred hhhhCchHHHhhcceeeecchHHHHhhhHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHhhhHHhHHHHHHHHHHHHH
Confidence 4789999999999999999999999999 677889998888899999999999889987 77888898888888889
Q ss_pred HHHHHHhcCCCceEEEEeeeecCCCCcccChHHHHHHHhhhhcCCcchHHHHHHHHHHcCCCceeecCCCCcCCCCCCch
Q 011007 76 IATVYFMSKPRHVYLVDYACYKPPVTCRVPFATFMEHSRLILKNNPKSVEFQMRILERSGLGEETCLPPAIHYIPPTPTM 155 (496)
Q Consensus 76 ~~~~~~~~~~~~v~Iv~~~~y~P~~~~~v~~~~~~e~~~~~~~~~~~~~~f~~~i~~~sGi~~r~~~~~~~~~~~~~~~~ 155 (496)
++++|+|+||++||++||+||+|++.++++.+.++|+....+.|++++++||+||++|||+|++||+|+..+..|++.+|
T Consensus 102 ~~~~~~~~~~~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~sg~g~~ty~P~~~~~~~~~~~~ 181 (521)
T PLN02854 102 LLGLYWAKRSKPVYLVDFACYKPEDERKISVDSFLTMTEENGSFEDETVQFQRRISTRSGLGDETYLPRGITSRPPNLCM 181 (521)
T ss_pred HHHHHHHcCCCcEEEEeeeeecCCccccccHHHHHHHHHHcCCCCHHHHHHHHHHHHhcCCCCccccCccccCCCCcchH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhHHHHHHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCCceeeEecCCCcchHHHHHHHHH
Q 011007 156 EAARGEAELVIFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLAR 235 (496)
Q Consensus 156 ~~~~~ea~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~ 235 (496)
+++|+|++++++.|+++||+++|++|+|||+||++||+++++||+|++|+++||+++++.+|||+||||+||++||++|+
T Consensus 182 ~~~r~ea~~v~~~~~~~lL~kaGi~p~dID~LIv~cS~~~p~PSlAa~I~n~LGlr~~i~afdLsgmGCSggl~aL~lA~ 261 (521)
T PLN02854 182 EEARAEAEAVMFGALDSLFSKTGVKPRDIGILIVNCSLFNPTPSLSAMIVNHYKLRTDIKSYNLGGMGCSAGLISIDLAN 261 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCCHHHHHHHHhCCCCCceEEecccchhhhHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCCEEEEEEECCCCCCCccCCCccccccccccccccEEEEEeccCCcccccceeEeeEEEEEecCCccccccee
Q 011007 236 DLLQVHPNSNAVVVSTEIITPNYYQGNERAMLLPNCLFRMGGAAILLSNRRRNRSRAKYRLVHVVRTHKGADDKAYRCVF 315 (496)
Q Consensus 236 ~lL~~~~~~~aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAaA~lLs~~~~~~~~~~~~L~~~~~t~~~~d~~~~~~~~ 315 (496)
++|+++++++||||++|.+|.+||.++||++++++++|||||||+||++++.++++++|+|.++++++.++|++.|+|++
T Consensus 262 ~lL~~~~~~~aLVVstE~~S~~~y~g~Drs~lv~~~LFgDGAAAvlLs~~~~~~~~~k~~L~~~v~t~~~ad~~~~~~i~ 341 (521)
T PLN02854 262 DLLKANPNSYAVVVSTENITLNWYFGNDRSMLLCNCIFRMGGAAVLLSNKARDRKRSKYQLVHTVRTHKGADDKNYNCVY 341 (521)
T ss_pred HHHHhCCCCeEEEEEEeeeecCCCCCCchhhhcceeeeccceeEEEEecccccccccchheeeEEEEEEeeCCCccCeEE
Confidence 99999999999999999999999999999999999999999999999997644456789999999999999999999999
Q ss_pred ecccCCCceeeeechhHHHHHHHHhhhhhhhcCCCccchhHHHHHHHHHHHHhhhccccCCcccchhccccEEEeccCCH
Q 011007 316 EEEDKEGKVGISLSKDLMAIAGEALKSNITTIGPLVLPASEQLLFLMTLIGRKIFNPKWKPYIPDFKQAFEHFCIHAGGR 395 (496)
Q Consensus 316 ~~~d~~G~~g~~ls~d~~~v~g~~l~~~i~~~gp~vlp~~e~~~~~~~~~~~~v~~~~~~~~~p~~~~did~f~~H~~~~ 395 (496)
+++|+.|..|+++++++|.+++++++.|++++||.++|++|+++|....+.+.+.+..+++|+|+|++||||||+||+|+
T Consensus 342 ~~~d~~G~~g~~lsk~l~~va~~~l~~~i~~~g~~Vl~~se~~~f~~~~i~~~L~~~gl~~~~pd~~~didhf~iHqggr 421 (521)
T PLN02854 342 QREDDKGTIGVSLARELMAVAGDALKTNITTLGPLVLPLSEQFMFFVTLVRRKLLKAKVKPYIPDFKLAFEHFCIHAGGR 421 (521)
T ss_pred eccCCCCcccccccccccchhhhhhhhhhhhccccccchHHHHHHHHHHHHHHHHHcCCCccCCcccccCcEEEECCCCH
Confidence 99988888899999999999999999999999999999999999888777677667778889999999999999999999
Q ss_pred HHHHHHHHHcCCChhhHhhhhhhhcccCCccCCchHHHHHHHHHhCCCCCCCEEEEEeechhHhhhheeeEeeccCCCC-
Q 011007 396 AVIDELQKNLQLSAEHVEASRMTLHRFGNTSSSSLWYEMSYIEEKGRMKKGDRVWQIAFGSGFKCNSAVWKCNKTIKTT- 474 (496)
Q Consensus 396 ~v~~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~i~~Gd~Vll~~fG~G~~~~sav~r~~~~~~~~- 474 (496)
++++.++++||+++++.++|+++++|||||||||+||+|++++++|++++||+|||+|||+||+||++||||++++++.
T Consensus 422 ~IId~v~k~LgL~~~~~e~sr~tL~rfGNTSSASI~~~L~~~~~kGrik~GD~Vl~iaFGsGft~~sav~~~~~~~~~~~ 501 (521)
T PLN02854 422 AVLDELQKNLQLSDWHMEPSRMTLHRFGNTSSSSLWYELAYTEAKGRVSAGDRVWQIAFGSGFKCNSAVWKALREIPTGE 501 (521)
T ss_pred HHHHHHHHHcCCCcccccchHHHhhhcCChHhhHHHHHHHHHHHcCCCCCCCEEEEEEEchhhhhhheeeEEeccCCccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999998865
Q ss_pred -CCCCCcccccCCCCCCCc
Q 011007 475 -TDNPWSDCIDRYPVHIPE 492 (496)
Q Consensus 475 -~~~~w~~~~~~~p~~~~~ 492 (496)
..|||+||||+|||++|.
T Consensus 502 ~~~~~w~~~i~~yp~~~~~ 520 (521)
T PLN02854 502 STGNPWADSIDRYPVKVPV 520 (521)
T ss_pred cCCCCchhhHhhCCCCCCC
Confidence 579999999999999875
No 3
>PLN02377 3-ketoacyl-CoA synthase
Probab=100.00 E-value=4.6e-115 Score=923.01 Aligned_cols=490 Identities=66% Similarity=1.147 Sum_probs=466.9
Q ss_pred CCCCCCCccccccchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHH
Q 011007 1 MPQTLPDFSNSVKLKYVKLGYQYLVNHILYLLLVPIMVAILIEVLRLGPDEILNLWKSLHFDLVQILCSSFLIIFIATVY 80 (496)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (496)
+|++||||++|+|+||||+||||+++|.++++++|++++++.++.+++.+|+..+|..+++++++++++++++++++++|
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (502)
T PLN02377 11 QTRMLPDFLQSVNLKYVKLGYHYLISNLLTLCFIPLIIIISIEASQMNPDDLRQLWIHLQYNLVSIIICSAFLVFGLTVY 90 (502)
T ss_pred ehhhCchHHHhhhhhhhhhhhHHHHhhhHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 47899999999999999999999999999999999998889999999999998899888888888888888888888999
Q ss_pred HhcCCCceEEEEeeeecCCCCcccChHHHHHHHhhhhcCCcchHHHHHHHHHHcCCCceeecCCCCcCCCCCCchHHHHH
Q 011007 81 FMSKPRHVYLVDYACYKPPVTCRVPFATFMEHSRLILKNNPKSVEFQMRILERSGLGEETCLPPAIHYIPPTPTMEAARG 160 (496)
Q Consensus 81 ~~~~~~~v~Iv~~~~y~P~~~~~v~~~~~~e~~~~~~~~~~~~~~f~~~i~~~sGi~~r~~~~~~~~~~~~~~~~~~~~~ 160 (496)
+|+||++||++||+||+|++.++++.+.++|+....+.|++++++||+||+++|||++++|+|+..++.|++.+|+++++
T Consensus 91 ~~~~~~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~ri~~~sgig~~t~~p~~~~~~~~~~~~~~~~~ 170 (502)
T PLN02377 91 IMTRPRPVYLVDYSCYRAPDHLKAPFARFMEHSRLTGDFDDSSLEFQRKILERSGLGEDTYVPEAMHYIPPRPSMAAARE 170 (502)
T ss_pred HHcCCCCEEEEeeeeecCCccccccHHHHHHHHHHhCCCCHHHHHHHHHHHHhcCCCCccccCchhccCCccchHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCCceeeEecCCCcchHHHHHHHHHHHHhc
Q 011007 161 EAELVIFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLLQV 240 (496)
Q Consensus 161 ea~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL~~ 240 (496)
|++++++.|+++||+++|++|+|||+||++|++++++||+|++|+++||+++++.+|||+||||+||++||++|++++++
T Consensus 171 ea~~l~~~A~~~aL~kaGi~p~dID~LVv~cS~~~~~PSlaa~V~~~LGlr~~v~afdL~gmGCsggl~aL~lA~~ll~~ 250 (502)
T PLN02377 171 EAEQVMFGALDNLFANTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAVDLAKDMLQV 250 (502)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCcHHHHHHHHhCCCCCCeEEecccchhhHHHHHHHHHHHHHHc
Confidence 99999999999999999999999999999889999999999999999999999999999999999999999999999999
Q ss_pred CCCCEEEEEEECCCCCCCccCCCccccccccccccccEEEEEeccCCcccccceeEeeEEEEEecCCcccccceeecccC
Q 011007 241 HPNSNAVVVSTEIITPNYYQGNERAMLLPNCLFRMGGAAILLSNRRRNRSRAKYRLVHVVRTHKGADDKAYRCVFEEEDK 320 (496)
Q Consensus 241 ~~~~~aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAaA~lLs~~~~~~~~~~~~L~~~~~t~~~~d~~~~~~~~~~~d~ 320 (496)
+++++||||++|++|.+|+.++++++++++++|||||||+||++++.++++++|++.++++++.++|++.|+|+++++|+
T Consensus 251 ~~~~~aLVVstE~~S~~~~~~d~~s~lv~n~LFgDGAaAvlLs~~~~~~~~a~~~l~~iv~t~~~~d~~~~~~i~~~~d~ 330 (502)
T PLN02377 251 HRNTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGGSAVLLSNKSRDKRRSKYKLVHVVRTHRGADDKAFRCVYQEQDD 330 (502)
T ss_pred CCCCEEEEEEEeccccccCCCCCccccccceeeccccEEEEEecccccccccccccceEEEEEEEEcCCccceeeecccc
Confidence 99999999999999999998888899999999999999999999765555678999899999999999999999999998
Q ss_pred CCceeeeechhHHHHHHHHhhhhhhhcCCCccchhHHHHHHHHHHHHhhhccccCCcccchhccccEEEeccCCHHHHHH
Q 011007 321 EGKVGISLSKDLMAIAGEALKSNITTIGPLVLPASEQLLFLMTLIGRKIFNPKWKPYIPDFKQAFEHFCIHAGGRAVIDE 400 (496)
Q Consensus 321 ~G~~g~~ls~d~~~v~g~~l~~~i~~~gp~vlp~~e~~~~~~~~~~~~v~~~~~~~~~p~~~~did~f~~H~~~~~v~~~ 400 (496)
+|+.|+++++++|.++|++++.|++++||.++|++|++.++.....+++++..+++|.|++++||||||+||+|++++++
T Consensus 331 ~G~~g~~ls~dl~~v~g~~l~~~i~~lg~~vl~~se~~~~~a~~~~~~~~~~~l~~~~p~~~~didhf~iHqggr~IId~ 410 (502)
T PLN02377 331 AGKTGVSLSKDLMAIAGEALKTNITTLGPLVLPISEQLLFFATLVVKKLFNKKMKPYIPDFKLAFDHFCIHAGGRAVIDE 410 (502)
T ss_pred CCCCCCCCCcchhhHhhHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhhccCCcHhhcCEEEECCCCHHHHHH
Confidence 89899999999999999999999999999999999999887766667777777777888999999999999999999999
Q ss_pred HHHHcCCChhhHhhhhhhhcccCCccCCchHHHHHHHHHhCCCCCCCEEEEEeechhHhhhheeeEeeccCCCCCCCCCc
Q 011007 401 LQKNLQLSAEHVEASRMTLHRFGNTSSSSLWYEMSYIEEKGRMKKGDRVWQIAFGSGFKCNSAVWKCNKTIKTTTDNPWS 480 (496)
Q Consensus 401 i~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~i~~Gd~Vll~~fG~G~~~~sav~r~~~~~~~~~~~~w~ 480 (496)
++++||++++++++|++++++||||||||+||+|++++++|++++||+|||+|||+||+|+++|||++++++++..|||+
T Consensus 411 v~k~LgL~~~~~e~sr~tL~r~GNTSSaSI~~aL~~~~~~grik~Gd~VlliaFGsGf~~~s~v~~~~~~~~~~~~~~w~ 490 (502)
T PLN02377 411 LEKNLQLLPVHVEASRMTLHRFGNTSSSSIWYELAYIEAKGRMRKGNRVWQIAFGSGFKCNSAVWEALRHVKPSNNSPWE 490 (502)
T ss_pred HHHHcCCCcccchHHHHHHHhcCCchhhHHHHHHHHHHHcCCCCCCCeEEEEEEccccEeeeEEEEEecCCCCCCCCCch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999887789999
Q ss_pred ccccCCCCCC
Q 011007 481 DCIDRYPVHI 490 (496)
Q Consensus 481 ~~~~~~p~~~ 490 (496)
||||+|||++
T Consensus 491 ~~i~~yp~~~ 500 (502)
T PLN02377 491 DCIDKYPVKL 500 (502)
T ss_pred hhHhhCCCcc
Confidence 9999999974
No 4
>PLN02932 3-ketoacyl-CoA synthase
Probab=100.00 E-value=6.6e-109 Score=871.40 Aligned_cols=469 Identities=55% Similarity=0.971 Sum_probs=447.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhcCCCceEEEEeeeecCCCC
Q 011007 22 QYLVNHILYLLLVPIMVAILIEVLRLGPDEILNLWKSLHFDLVQILCSSFLIIFIATVYFMSKPRHVYLVDYACYKPPVT 101 (496)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Iv~~~~y~P~~~ 101 (496)
.|+++|.++++++|++++++.++.+++.+|++.+|..++.++++++.+++++++++++|+|+||++||++||+||+|++.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyl~d~~c~~p~~~ 81 (478)
T PLN02932 2 NYLMAHRFKLCFLPLMVGIAMEASRLSTQDLQNFYLYLQNNLTSLTMFFLYLALGSTLYLMTRPKPVYLVDFSCYLPPSH 81 (478)
T ss_pred hhHHHhHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeeeecCccc
Confidence 57899999999999998889999999999988899888888888888888888888999999999999999999999999
Q ss_pred cccChHHHHHHHhhh---hcCCcch---HHHHHHHHHHcCCCceeecCCCCcCCCCCCchHHHHHhHHHHHHHHHHHHHH
Q 011007 102 CRVPFATFMEHSRLI---LKNNPKS---VEFQMRILERSGLGEETCLPPAIHYIPPTPTMEAARGEAELVIFSAMDSLLQ 175 (496)
Q Consensus 102 ~~v~~~~~~e~~~~~---~~~~~~~---~~f~~~i~~~sGi~~r~~~~~~~~~~~~~~~~~~~~~ea~~la~~Aa~~aL~ 175 (496)
++++.+.++|+.... +.|++++ ++||+||++||||++|||+|+..+..|++.+|+++++|+++|+++|+++||+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~i~~rsGig~~t~~p~~~~~~~~~~~~~~~~~ea~~la~~Aa~~aL~ 161 (478)
T PLN02932 82 LKASIQTIMGHVRRVREAGAWKQESDYLMDFCEKILERSGLGQETYIPEGLQCLPLQQNLAVSRKETEEVIIGAVDNLFR 161 (478)
T ss_pred ccccHHHHHHHHHhhcccCCCCccchhHHHHHHHHHHHcCCCCceeeccccccCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999998766 6898888 9999999999999999999999988889999999999999999999999999
Q ss_pred HcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCCceeeEecCCCcchHHHHHHHHHHHHhcCCCCEEEEEEECCCC
Q 011007 176 KTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLLQVHPNSNAVVVSTEIIT 255 (496)
Q Consensus 176 ~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL~~~~~~~aLVVs~E~~s 255 (496)
++|++|+|||+||++|++++++|+++++|+++||+++++.+|||+||||+||++||++|+++++++++++||||++|.+|
T Consensus 162 ~agi~p~dId~lIv~tst~~~~Pslaa~V~~~lGlr~~i~~fdL~gmGCSggl~aL~lA~~ll~~~~~~~aLVVstE~~S 241 (478)
T PLN02932 162 NTGISPSDIGILVVNSSTFNPTPSLSSILVNKFKLRDNIKSLNLGGMGCSAGVIAIDAAKSLLQVHRNTYALVVSTENIT 241 (478)
T ss_pred HcCCCHHHCCEEEEEccCCCCCCcHHHHHHHHhCCCCCceEEEeccchhhhHHHHHHHHHHHHHcCCCCeEEEEEEeecc
Confidence 99999999999999999888999999999999999989999999999999999999999999999999999999999999
Q ss_pred CCCccCCCccccccccccccccEEEEEeccCCcccccceeEeeEEEEEecCCcccccceeecccCCCceeeeechhHHHH
Q 011007 256 PNYYQGNERAMLLPNCLFRMGGAAILLSNRRRNRSRAKYRLVHVVRTHKGADDKAYRCVFEEEDKEGKVGISLSKDLMAI 335 (496)
Q Consensus 256 ~~~~~~~dr~~l~~~~lfgDGAaA~lLs~~~~~~~~~~~~L~~~~~t~~~~d~~~~~~~~~~~d~~G~~g~~ls~d~~~v 335 (496)
.+||.+++|+|++++++|||||||+||++++.++++++|+|.++++++.++|++.|+|+++++|++|..|+.|+|++|.+
T Consensus 242 ~~~~~~d~r~~l~t~~LFgDGAAAvlLs~~~~~~~~~~~~L~~~v~t~~~ad~~~~~~v~~~~d~~G~~g~~Lsk~lp~~ 321 (478)
T PLN02932 242 QNLYLGNNKSMLVTNCLFRIGGAAILLSNRSRDRKRAKYELVHTVRVHTGADDRSYECATQEEDEDGIVGVSLSKNLPMV 321 (478)
T ss_pred cccCCCcchhhhccceeecccceEEEEecccccccCcceEEEeeeeeeeccCCCccccceeecccCCcceeeECccchHH
Confidence 99999888999999999999999999999775445679999999999999999999999999998899999999999999
Q ss_pred HHHHhhhhhhhcCCCccchhHHHHHHHHHHHHhhhccccCCcccchhccccEEEeccCCHHHHHHHHHHcCCChhhHhhh
Q 011007 336 AGEALKSNITTIGPLVLPASEQLLFLMTLIGRKIFNPKWKPYIPDFKQAFEHFCIHAGGRAVIDELQKNLQLSAEHVEAS 415 (496)
Q Consensus 336 ~g~~l~~~i~~~gp~vlp~~e~~~~~~~~~~~~v~~~~~~~~~p~~~~did~f~~H~~~~~v~~~i~~~Lgl~~e~~~~S 415 (496)
++++++.|++++||.++|++|+++|++++.++++++.+.+.|.|+++++|||||+||+|+++++.++++||++++++++|
T Consensus 322 ~~~al~~ni~~~~p~v~p~~e~~~~~~~~~~~~~~k~~~~~~~~~~~~~id~f~iHqggr~IIdav~k~LgL~~~~~e~s 401 (478)
T PLN02932 322 AARTLKINIATLGPLVLPLSEKFHFFVRFVKKKFFNPKLKHYIPDFKLAFEHFCIHAGGRALIDEMEKNLHLTPLDVEAS 401 (478)
T ss_pred HHHHHhhhhhccccccccchhhhHHHHHHhHHHHHHHHhhcCcHhHHhhhceEEEccCCHHHHHHHHHHcCCChHHHHHH
Confidence 99999999999999999999999999999999999877888899999999999999999999999999999999999999
Q ss_pred hhhhcccCCccCCchHHHHHHHHHhCCCCCCCEEEEEeechhHhhhheeeEeeccCCCCCCCCCcccccCCCCCC
Q 011007 416 RMTLHRFGNTSSSSLWYEMSYIEEKGRMKKGDRVWQIAFGSGFKCNSAVWKCNKTIKTTTDNPWSDCIDRYPVHI 490 (496)
Q Consensus 416 ~~~l~r~GNtsSaSi~~~La~~~~~g~i~~Gd~Vll~~fG~G~~~~sav~r~~~~~~~~~~~~w~~~~~~~p~~~ 490 (496)
+++++|||||||||+||+|++++++|++++||+|||+|||+||+||++|||+++++++...|||+||||+|||++
T Consensus 402 ~~tL~rfGNTSSaSI~~~L~~~ea~grik~Gd~vl~iaFGsGf~~~s~vw~~~~~~~~~~~~~w~~~i~~yp~~~ 476 (478)
T PLN02932 402 RMTLHRFGNTSSSSIWYELAYTEAKGRMKKGDRIWQIALGSGFKCNSSVWVALRNVKPSANNPWEDCLHKYPVEI 476 (478)
T ss_pred HHHHHHhCChhhhHHHHHHHHHHHcCCCCCCCEEEEEEEeccHHHHHHHHHHhcCCCCcCCCCchhhHhhCCCCC
Confidence 999999999999999999999999999999999999999999999999999999998876799999999999975
No 5
>PLN00415 3-ketoacyl-CoA synthase
Probab=100.00 E-value=4.2e-99 Score=788.13 Aligned_cols=430 Identities=53% Similarity=0.994 Sum_probs=407.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhcCCCceEEEEeeeecCCCCcccChHHHHHHHhhhhcCCcchHHHHHHHHHHcCCCcee
Q 011007 61 FDLVQILCSSFLIIFIATVYFMSKPRHVYLVDYACYKPPVTCRVPFATFMEHSRLILKNNPKSVEFQMRILERSGLGEET 140 (496)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Iv~~~~y~P~~~~~v~~~~~~e~~~~~~~~~~~~~~f~~~i~~~sGi~~r~ 140 (496)
+.+..+-+.++++++++++|+++||++||++||+||+|++.++++.+.++|+....+.|++++++||++|+++|||++++
T Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~s~~F~~~i~~rSGlg~et 112 (466)
T PLN00415 33 FSPFPVKIGLLLISIFFYAYSTTRSKPVYLVDFSCHQPTDSCKISSETFFNMAKGAQLYTEETIQFMTRILNRSGLGDDT 112 (466)
T ss_pred CChhHHHHHHHHHHHHHHHHHHcCCCcEEEEeeeeecCCccccccHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCCCCCe
Confidence 34455555666666777889999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCcCCCCCCchHHHHHhHHHHHHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCCceeeEec
Q 011007 141 CLPPAIHYIPPTPTMEAARGEAELVIFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSNIKSFNLS 220 (496)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~ea~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~~~~~dl~ 220 (496)
|.|+..+..|+..+|+++++|+++.++.|++++|+++|++|+|||+||++|++++++|+++++|+++||+++++.+|||+
T Consensus 113 ~~p~~~~~~~~~~~~~~~~~e~em~i~~A~~~aL~~aGi~p~dID~LIvs~T~~~~~Pslaa~l~~~LGLr~~v~~~dL~ 192 (466)
T PLN00415 113 YSPRCMLTSPPTPSMYEARHESELVIFGALNSLFKKTGIEPREVGIFIVNCSLFNPNPSLSSMIVNRYKLKTDVKTYNLS 192 (466)
T ss_pred eeCCccccCCCCCChhhhHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECcCCCCCchHHHHHHHHhCCCCCceEEEec
Confidence 99999999999999999999999999999999999999999999999988888889999999999999999999999999
Q ss_pred CCCcchHHHHHHHHHHHHhcCCCCEEEEEEECCCCCCCccCCCccccccccccccccEEEEEeccCCcccccceeEeeEE
Q 011007 221 GMGCSAGLISIDLARDLLQVHPNSNAVVVSTEIITPNYYQGNERAMLLPNCLFRMGGAAILLSNRRRNRSRAKYRLVHVV 300 (496)
Q Consensus 221 g~gCsg~l~al~lA~~lL~~~~~~~aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAaA~lLs~~~~~~~~~~~~L~~~~ 300 (496)
||||+|++.||++|+++++++++++||||++|.+|.++|+++|+++++++++|||||||+||++++.++++++|+|.+++
T Consensus 193 gmGCsggv~aL~lA~~ll~a~~~~~aLVVs~E~~S~~~~~~~dr~~lv~n~LFgDGAAAvlLs~~~~~~~~~~~~L~~~v 272 (466)
T PLN00415 193 GMGCSAGAISVDLATNLLKANPNTYAVIVSTENMTLSMYRGNDRSMLVPNCLFRVGGAAVMLSNRSQDRVRSKYELTHIV 272 (466)
T ss_pred cccchHHHHHHHHHHHHHHhCCCCEEEEEEEecccccccCCCcHhHhccceeecccceEEEEecCcccccCccceeeeEE
Confidence 99999999999999999999999999999999999988889999999999999999999999998766666899999999
Q ss_pred EEEecCCcccccceeecccCCCceeeeechhHHHHHHHHhhhhhhhcCCCccchhHHHHHHHHHHHHhhhccccCCcccc
Q 011007 301 RTHKGADDKAYRCVFEEEDKEGKVGISLSKDLMAIAGEALKSNITTIGPLVLPASEQLLFLMTLIGRKIFNPKWKPYIPD 380 (496)
Q Consensus 301 ~t~~~~d~~~~~~~~~~~d~~G~~g~~ls~d~~~v~g~~l~~~i~~~gp~vlp~~e~~~~~~~~~~~~v~~~~~~~~~p~ 380 (496)
+++.+.+++.|.|+++.+|++|..|+.|+||+|.+++++++.|+++++|.++|++|+++|....+.++.++..++.|+|+
T Consensus 273 rt~~~~~d~~~~~~~~~~d~~G~~gv~Lsk~lp~va~~~l~~ni~~l~p~vlp~~e~~~~~~~~i~~~~~~~~~~~~~pd 352 (466)
T PLN00415 273 RTHKGSSDKHYTCAEQKEDSKGIVGVALSKELTVVAGDTLKTNLTALGPLVLPLSEKLRFILFLVKSKLFRLKVSPYVPD 352 (466)
T ss_pred EecCCCChhhhcceeeeecCCCcceEEEChHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHhhhhhhccCCCCCCC
Confidence 99999899999999999999999999999999999999999999999999999999999988888888888777889999
Q ss_pred hhccccEEEeccCCHHHHHHHHHHcCCChhhHhhhhhhhcccCCccCCchHHHHHHHHHhCCCCCCCEEEEEeechhHhh
Q 011007 381 FKQAFEHFCIHAGGRAVIDELQKNLQLSAEHVEASRMTLHRFGNTSSSSLWYEMSYIEEKGRMKKGDRVWQIAFGSGFKC 460 (496)
Q Consensus 381 ~~~did~f~~H~~~~~v~~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~i~~Gd~Vll~~fG~G~~~ 460 (496)
++..++|||+|+||++|+++++++|||+++++++|+++|+|||||||+|+||+|++++++|++++||++||+|||+||+|
T Consensus 353 ~~~~~~hf~iHpGGraVLdave~~LgL~~~~le~Sr~vL~r~GN~SSsSV~yvL~~~~~~~~~~~Gdrvl~iaFGpGf~~ 432 (466)
T PLN00415 353 FKLCFKHFCIHAGGRALLDAVEKGLGLSEFDLEPSRMTLHRFGNTSSSSLWYELAYVEAKCRVKRGDRVWQLAFGSGFKC 432 (466)
T ss_pred ccccceeEEecCCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchhhhHHHHHHHHHhhccCCCCCEEEEEEEcCcchh
Confidence 98889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hheeeEeeccCCCCCC---CCCcccccCCCCCC
Q 011007 461 NSAVWKCNKTIKTTTD---NPWSDCIDRYPVHI 490 (496)
Q Consensus 461 ~sav~r~~~~~~~~~~---~~w~~~~~~~p~~~ 490 (496)
+++|||+++++++..+ |||+||||+|||++
T Consensus 433 es~v~~~~~~~~~~~~~~~~~w~~~i~~yp~~~ 465 (466)
T PLN00415 433 NSIVWRALRTIPANESLVGNPWGDSVHKYPVHV 465 (466)
T ss_pred hHhHHHHhccCCcccccCCCCchhhHHhCCCCC
Confidence 9999999999887543 99999999999964
No 6
>PF08392 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-like protein; InterPro: IPR013601 This domain is found in proteins that are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species. The region contains the active site residues, as well as motifs involved in substrate binding []. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006633 fatty acid biosynthetic process, 0016020 membrane
Probab=100.00 E-value=2.1e-77 Score=588.53 Aligned_cols=290 Identities=68% Similarity=1.129 Sum_probs=284.6
Q ss_pred HHhcCCCceEEEEeeeecCCCCcccChHHHHHHHhhhhcCCcchHHHHHHHHHHcCCCceeecCCCCcCCCCCCchHHHH
Q 011007 80 YFMSKPRHVYLVDYACYKPPVTCRVPFATFMEHSRLILKNNPKSVEFQMRILERSGLGEETCLPPAIHYIPPTPTMEAAR 159 (496)
Q Consensus 80 ~~~~~~~~v~Iv~~~~y~P~~~~~v~~~~~~e~~~~~~~~~~~~~~f~~~i~~~sGi~~r~~~~~~~~~~~~~~~~~~~~ 159 (496)
|+|+|+++|||+||+||+|+++++++.+.+++++...+.|++++++||+||+++|||+++||+|+..+..|++.++++++
T Consensus 1 y~~~R~r~VYLvDfac~kP~~~~~v~~~~~~e~~~~~~~f~~~sl~F~~kIlerSGlG~eTy~P~~~~~~p~~~s~~~a~ 80 (290)
T PF08392_consen 1 YFMRRPRPVYLVDFACYKPPDELRVSREEFIEHARRCGRFDEESLDFQRKILERSGLGDETYLPPALHEIPPDPSLAAAR 80 (290)
T ss_pred CccCCCCCEEEEeeeecCCCcccccCHHHHHHHHHhcccCChhHHHHHHHHHHhcCCCccccCCcccccCCCcccHHHHH
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhHHHHHHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCCceeeEecCCCcchHHHHHHHHHHHHh
Q 011007 160 GEAELVIFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLLQ 239 (496)
Q Consensus 160 ~ea~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL~ 239 (496)
+|++++++.|++++|+|+|++|+|||+||+|||.++++||+++||+|+|||++|+.+|||+|||||+++++|++|++||+
T Consensus 81 ~Eae~v~f~av~~LL~ktgv~p~dIdiLVvncs~f~ptPSLsamIvnr~~mr~di~~~nLsGMGCsAgliai~lA~~lL~ 160 (290)
T PF08392_consen 81 EEAEMVIFGAVDDLLAKTGVKPSDIDILVVNCSLFNPTPSLSAMIVNRYGMRSDIKSYNLSGMGCSAGLIAIDLAKDLLQ 160 (290)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECcCCCcCCcHHHHHHHHhCCCcCeeeecccCCcchhhHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCEEEEEEECCCCCCCccCCCccccccccccccccEEEEEeccCCcccccceeEeeEEEEEecCCcccccceeeccc
Q 011007 240 VHPNSNAVVVSTEIITPNYYQGNERAMLLPNCLFRMGGAAILLSNRRRNRSRAKYRLVHVVRTHKGADDKAYRCVFEEED 319 (496)
Q Consensus 240 ~~~~~~aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAaA~lLs~~~~~~~~~~~~L~~~~~t~~~~d~~~~~~~~~~~d 319 (496)
.+|+++||||++|++|.+||.|+||+|+++||||||||||+||||++.+++++||+|.|++|||.++||++|+|++|+||
T Consensus 161 ~~p~~~ALVVstE~~s~~~Y~G~~rsmlv~NcLFr~GgAAvLLSn~~~~~~~aky~L~~~vRt~~g~~d~ay~~v~q~eD 240 (290)
T PF08392_consen 161 AHPNSYALVVSTENISANWYRGNDRSMLVSNCLFRMGGAAVLLSNKPSDRRRAKYELLHTVRTHTGADDDAYRCVFQEED 240 (290)
T ss_pred hCCCcEEEEEEEeecccccccCCcHHHhhccccccCCceeEEeecCccccccchhhhhheeeeecCCCCCceeeEEEeEc
Confidence 99999999999999999999999999999999999999999999999998999999999999999999999999999999
Q ss_pred CCCceeeeechhHHHHHHHHhhhhhhhcCCCccchhHHHHHHHHHHHHhh
Q 011007 320 KEGKVGISLSKDLMAIAGEALKSNITTIGPLVLPASEQLLFLMTLIGRKI 369 (496)
Q Consensus 320 ~~G~~g~~ls~d~~~v~g~~l~~~i~~~gp~vlp~~e~~~~~~~~~~~~v 369 (496)
++|+.|++|+||++.++|+++|.||+++||+|||++||++|.++++.+|+
T Consensus 241 ~~g~~Gv~lsk~l~~vag~al~~ni~~l~p~vLP~sE~~~~~~~~~~rk~ 290 (290)
T PF08392_consen 241 EEGIVGVSLSKDLMKVAGKALKANITTLGPLVLPLSEQLRFAASFIARKV 290 (290)
T ss_pred CCCceEEEEecchHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHhhC
Confidence 99999999999999999999999999999999999999999998887764
No 7
>COG0332 FabH 3-oxoacyl-[acyl-carrier-protein]
Probab=100.00 E-value=4.1e-57 Score=455.79 Aligned_cols=317 Identities=22% Similarity=0.333 Sum_probs=264.3
Q ss_pred CceEEEEeeeecCCCCcccChHHHHHHHhhhhcCCcchHHHHHHHHHHcCCCceeecCCCCcCCCCCCchHHHHHhHHHH
Q 011007 86 RHVYLVDYACYKPPVTCRVPFATFMEHSRLILKNNPKSVEFQMRILERSGLGEETCLPPAIHYIPPTPTMEAARGEAELV 165 (496)
Q Consensus 86 ~~v~Iv~~~~y~P~~~~~v~~~~~~e~~~~~~~~~~~~~~f~~~i~~~sGi~~r~~~~~~~~~~~~~~~~~~~~~ea~~l 165 (496)
..++|.++|.|+|+ ++++|+++.+.... ++| ||..++||++||++.+++. ..+|
T Consensus 2 ~~a~i~g~G~~lP~--~~vtn~d~e~~~~t----sde------wI~~rtGir~R~~a~~~e~--------------~s~l 55 (323)
T COG0332 2 MNAKILGIGSYLPE--RVVTNADLEKRVDT----SDE------WIETRTGIRERRIAADDET--------------TSDL 55 (323)
T ss_pred CcceEEEEEeecCC--cccChHHHHhccCC----Ccc------eeeeecCCceeeecCCCcc--------------HHHH
Confidence 46889999999999 89999999966554 555 7999999999999988764 6899
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEeec-cCCCCCCcHHHHHHHHcCCCCCceeeEecCCCcchHHHHHHHHHHHHhcCCCC
Q 011007 166 IFSAMDSLLQKTGLKPKDIDILIVNC-SLFSPTPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLLQVHPNS 244 (496)
Q Consensus 166 a~~Aa~~aL~~agi~p~dID~LI~~s-s~~~~~Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL~~~~~~ 244 (496)
+++|+++||+++|++|+|||+||++| +|+++.|++|++||++||+. ++.+||++ .+|+|++.||++|..++++|.++
T Consensus 56 a~~Aa~~AL~~Agi~~~dIDlII~aT~tpd~~~Ps~A~~vq~~LG~~-~~~afDl~-aaCsgf~yaL~~A~~~i~sG~~k 133 (323)
T COG0332 56 AVEAARKALEDAGISPDDIDLIIVATSTPDHLFPSTACLVQARLGLG-GAPAFDLQ-AACSGFLYALSVADGLIRSGGYK 133 (323)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEcCCcccCCChHHHHHHHHhCCC-Ccceeech-hhhHHHHHHHHHHHHHHHcCCCC
Confidence 99999999999999999999999997 57899999999999999998 69999999 79999999999999999999999
Q ss_pred EEEEEEECCCCCCCccCCCccccccccccccccEEEEEeccCCcccccceeEeeEEEEEecCCcccccceeecccCCCce
Q 011007 245 NAVVVSTEIITPNYYQGNERAMLLPNCLFRMGGAAILLSNRRRNRSRAKYRLVHVVRTHKGADDKAYRCVFEEEDKEGKV 324 (496)
Q Consensus 245 ~aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAaA~lLs~~~~~~~~~~~~L~~~~~t~~~~d~~~~~~~~~~~d~~G~~ 324 (496)
+||||++|++|+ +.+++||. ++.+|||||+|+||++.+.+. ++..++.++|++.+++++.+......
T Consensus 134 ~vLVVg~e~~S~-~ld~~dR~---t~vlFgDGAgAvvl~~~~~~~--------~i~~~~l~sdg~~~~~l~~~~~~~~~- 200 (323)
T COG0332 134 NVLVVGAETLSR-ILDWTDRD---TCVLFGDGAGAVVLEATEDDN--------GILDTDLGSDGSQGDLLYLPGGGSAT- 200 (323)
T ss_pred EEEEEehhHhhc-cCCHhhcc---ceEEEcCCceEEEEecCCCCc--------CeeeeeeeccccCCCeeeccCCCCcc-
Confidence 999999999998 67888997 688999999999999987332 46678999999998887766432111
Q ss_pred eeeechhHHHHHHHHhhhhhhhcCCCccchhHHHHHHHHHH---HHhhhc-cccCCcccchhccccEEEeccCCHHHHHH
Q 011007 325 GISLSKDLMAIAGEALKSNITTIGPLVLPASEQLLFLMTLI---GRKIFN-PKWKPYIPDFKQAFEHFCIHAGGRAVIDE 400 (496)
Q Consensus 325 g~~ls~d~~~v~g~~l~~~i~~~gp~vlp~~e~~~~~~~~~---~~~v~~-~~~~~~~p~~~~did~f~~H~~~~~v~~~ 400 (496)
.+... ....+.+.|+.| +++...+. .+++++ ..+. ++|||||++||.|.++++.
T Consensus 201 ----~~~~~------~~~~~~m~Gr~v------fk~av~~~~~~~~~~L~~~~l~------~~dId~~vpHQan~ri~~~ 258 (323)
T COG0332 201 ----PKEES------GGGLLVMDGREV------FKFAVRAMPKAIEEVLEKAGLT------PEDIDWFVPHQANLRIIEA 258 (323)
T ss_pred ----ccccc------cccceeeccHHH------HHHHHHHHHHHHHHHHHHcCCC------HHHCCEEccccccHHHHHH
Confidence 00000 011223333322 22222222 123332 2222 5899999999999999999
Q ss_pred HHHHcCCChhhHhhhhhhhcccCCccCCchHHHHHHHHHhCCCCCCCEEEEEeechhHhhhheeeEee
Q 011007 401 LQKNLQLSAEHVEASRMTLHRFGNTSSSSLWYEMSYIEEKGRMKKGDRVWQIAFGSGFKCNSAVWKCN 468 (496)
Q Consensus 401 i~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~i~~Gd~Vll~~fG~G~~~~sav~r~~ 468 (496)
++++||++++|+ ..++++|||||++|+|+.|+.+.++|++++||+|++.+||+|++|+++++||.
T Consensus 259 i~~~l~~~~~k~---~~~~~~yGNtsaAsiplaL~~~~~~g~ik~Gd~ill~~fG~Gltwg~~~~r~~ 323 (323)
T COG0332 259 IAKKLGIPEEKV---VVTVDKYGNTSAASIPLALDEALREGRIKPGDLVLLEAFGGGLTWGAALVRWG 323 (323)
T ss_pred HHHHcCCCHHHH---hhHHHHhcccccchHHHHHHHHhhhCCCCCCCEEEEEeecCcceeeeEEEEeC
Confidence 999999999999 68999999999999999999999999999999999999999999999999984
No 8
>cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs. PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions.
Probab=100.00 E-value=6.1e-52 Score=430.44 Aligned_cols=346 Identities=41% Similarity=0.657 Sum_probs=265.9
Q ss_pred eEEEEeeeecCCCCcccChHHHHHHHhhhhc--CCcchHHHHHHHHHHcCCCceeecCC--CCcC-------CCCCCchH
Q 011007 88 VYLVDYACYKPPVTCRVPFATFMEHSRLILK--NNPKSVEFQMRILERSGLGEETCLPP--AIHY-------IPPTPTME 156 (496)
Q Consensus 88 v~Iv~~~~y~P~~~~~v~~~~~~e~~~~~~~--~~~~~~~f~~~i~~~sGi~~r~~~~~--~~~~-------~~~~~~~~ 156 (496)
++|.++++|+|+ ++++|+++.+.+..... +.+...++.++|++++||++|+++.+ ++.. .+.....+
T Consensus 2 ~~I~~~~~~~P~--~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gI~~R~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (361)
T cd00831 2 ATILAIGTAVPP--HRVPQSELVDFYRRLFSSDHLPELKEKLKRLCAKTGIETRYLVLPGGEETYAPRPEMSPSLDERND 79 (361)
T ss_pred cEEEEEEEeCCC--CcCCHHHhhHHHHhcCChhhhHHHHHHHHHHHhhcceeEEEEEecCchhhcCCccccCCCcCcchh
Confidence 689999999999 89999999998763210 01234556688999999999999866 3321 12345677
Q ss_pred HHHHhHHHHHHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCCceeeEecCCCcchHHHHHHHHHH
Q 011007 157 AARGEAELVIFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARD 236 (496)
Q Consensus 157 ~~~~ea~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~ 236 (496)
.+.+++.+|+.+|++++|+++|++|+|||+||++|++++..|+++.+|+++||+++++.+||++++||+|++.||++|.+
T Consensus 80 ~~~~~~~~la~~Aa~~aL~~a~~~~~~Id~li~~s~~~~~~P~~a~~i~~~lgl~~~~~~~dv~~~~C~~~~~al~~A~~ 159 (361)
T cd00831 80 IALEEARELAEEAARGALDEAGLRPSDIDHLVVNTSTGNPTPSLDAMLINRLGLRPDVKRYNLGGMGCSAGAIALDLAKD 159 (361)
T ss_pred hHHHHHHHHHHHHHHHHHHHhCCCHHHCCEEEEECCCCCCCCCHHHHHHHHhCCCcccchhccccccchhHHHHHHHHHH
Confidence 88899999999999999999999999999999998888899999999999999987899999997899999999999999
Q ss_pred HHhcCCCCEEEEEEECCCCCCCccCCC-ccccccccccccccEEEEEeccCCccc--ccceeEeeEEEEEecCCcccccc
Q 011007 237 LLQVHPNSNAVVVSTEIITPNYYQGNE-RAMLLPNCLFRMGGAAILLSNRRRNRS--RAKYRLVHVVRTHKGADDKAYRC 313 (496)
Q Consensus 237 lL~~~~~~~aLVVs~E~~s~~~~~~~d-r~~l~~~~lfgDGAaA~lLs~~~~~~~--~~~~~L~~~~~t~~~~d~~~~~~ 313 (496)
++++++.++||||++|..|. +++++| +.+.+++++|||||+|+||++++.... ...+++.+....... +. .+.
T Consensus 160 ~~~~~~~~~aLvv~~e~~s~-~~~~~d~~~~~~~~~lfGDgaaA~ll~~~~~~~~~~~~~~~~~~~~~~~~p-~~--~~~ 235 (361)
T cd00831 160 LLEANPGARVLVVSTELCSL-WYRGPDHRSMLVGNALFGDGAAAVLLSNDPRDRRRERPLFELVRAASTLLP-DS--EDA 235 (361)
T ss_pred HHHHCCCCEEEEEEeecccc-eeCCCCcHHHhhhhhhccCCceEEEEEcCCCcccccccceeeecccceeee-cC--CCc
Confidence 99999999999999999997 666666 666667899999999999998765321 123444332111111 11 010
Q ss_pred eeecccCCCceeeeechhHHHHHHHHhhhhhhhcCCCccchhHHHHHHHHHHHHhhhccccCCcccchhccccEEEeccC
Q 011007 314 VFEEEDKEGKVGISLSKDLMAIAGEALKSNITTIGPLVLPASEQLLFLMTLIGRKIFNPKWKPYIPDFKQAFEHFCIHAG 393 (496)
Q Consensus 314 ~~~~~d~~G~~g~~ls~d~~~v~g~~l~~~i~~~gp~vlp~~e~~~~~~~~~~~~v~~~~~~~~~p~~~~did~f~~H~~ 393 (496)
+....+ +....+.++++++....+.+ ....++++++.- .+..++|||||++||+
T Consensus 236 ~~~~~~-~~~~~~~~~~~v~~~~~~~~----------------------~~~i~~~L~~~~---~g~~~~did~~~~H~~ 289 (361)
T cd00831 236 MGWHLG-EEGLTFVLSRDVPRLVEKNL----------------------ERVLRKLLARLG---IGLFKLAFDHWCVHPG 289 (361)
T ss_pred eEEEEE-cceEEEEeChhHHHHHHHHH----------------------HHHHHHHhcccc---CCCccccceEEEECCC
Confidence 000000 11123333343433221111 111133443210 0222489999999999
Q ss_pred CHHHHHHHHHHcCCChhhHhhhhhhhcccCCccCCchHHHHHHHHHhCCCCCCCEEEEEeechhHhhhheee
Q 011007 394 GRAVIDELQKNLQLSAEHVEASRMTLHRFGNTSSSSLWYEMSYIEEKGRMKKGDRVWQIAFGSGFKCNSAVW 465 (496)
Q Consensus 394 ~~~v~~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~i~~Gd~Vll~~fG~G~~~~sav~ 465 (496)
|+++++.+++.||++++++++|++++++||||||+|+|+.|++++++|++++||+|++++||+|++|++++|
T Consensus 290 ~~~i~~~v~~~lgl~~~~~~~s~~~l~~~GN~~sasi~~~L~~~~~~g~~~~Gd~vll~~~G~G~s~~~~l~ 361 (361)
T cd00831 290 GRAVLDAVEKALGLSPEDLEASRMVLRRYGNMSSSSVLYVLAYMEAKGRVKRGDRGLLIAFGPGFTCESAVW 361 (361)
T ss_pred ChHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchhccHHHHHHHHHHhCCCCCCCEEEEEEEcCCceeeeeeC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999987
No 9
>PLN03172 chalcone synthase family protein; Provisional
Probab=100.00 E-value=2.1e-51 Score=429.37 Aligned_cols=347 Identities=19% Similarity=0.267 Sum_probs=271.6
Q ss_pred CceEEEEeeeecCCCCcccChHHHHHHHhhhhcC-CcchHHH-HHHHHHHcCCCceeecCCC----CcCC------C-CC
Q 011007 86 RHVYLVDYACYKPPVTCRVPFATFMEHSRLILKN-NPKSVEF-QMRILERSGLGEETCLPPA----IHYI------P-PT 152 (496)
Q Consensus 86 ~~v~Iv~~~~y~P~~~~~v~~~~~~e~~~~~~~~-~~~~~~f-~~~i~~~sGi~~r~~~~~~----~~~~------~-~~ 152 (496)
.+++|.++|+..|+ +.++++++.+.+...... +...++. +.+|++++||++|+..-+. +... | ..
T Consensus 15 ~~~~I~~igta~P~--~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~p~~~ 92 (393)
T PLN03172 15 GPATILAIGKATPA--NCVSQADYPDYYFRITNSEHMTELKEKFKRMCDKSMIKKRYMHLTEEILKENPNMCAYMAPSLD 92 (393)
T ss_pred CCeEEEEEEecCCC--ccccHHHHHHHHHHHhcccCchHHHHHHHHHHHhcCCCceeEeccchhhhhCccccccCCCCHH
Confidence 45889999999999 899999999987643211 1122333 6779999999999975421 1110 1 13
Q ss_pred CchHHHHHhHHHHHHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCCcee-eEecCCCcchHHHHH
Q 011007 153 PTMEAARGEAELVIFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSNIKS-FNLSGMGCSAGLISI 231 (496)
Q Consensus 153 ~~~~~~~~ea~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~~~~-~dl~g~gCsg~l~al 231 (496)
..++.+.+++.+|+.+|+++||+++|++++|||+||++|+++...|+++.+|+++||+++++.+ ++++ +||+|++.||
T Consensus 93 ~r~~~~~~~a~~La~~Aa~~aL~~ag~~~~dId~ii~~t~t~~~~P~~a~~l~~~LGl~~~~~~~~~~~-~gC~g~~~aL 171 (393)
T PLN03172 93 ARQDMVVVEVPKLGKEAAAKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLKPSVKRFMMYQ-QGCFAGGTVL 171 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCcCchHHHHHHHHhCCCCCceEEeeeC-CchHHHHHHH
Confidence 3567788999999999999999999999999999998877666699999999999999977766 5556 8999999999
Q ss_pred HHHHHHHhcCCCCEEEEEEECCCCCCCccCCCc--cccccccccccccEEEEEeccCCcc-cccceeEeeEEEEE-ecCC
Q 011007 232 DLARDLLQVHPNSNAVVVSTEIITPNYYQGNER--AMLLPNCLFRMGGAAILLSNRRRNR-SRAKYRLVHVVRTH-KGAD 307 (496)
Q Consensus 232 ~lA~~lL~~~~~~~aLVVs~E~~s~~~~~~~dr--~~l~~~~lfgDGAaA~lLs~~~~~~-~~~~~~L~~~~~t~-~~~d 307 (496)
++|.+++++++.++||||++|.+|.++.+++|+ +.++++++|||||+|+||++++... .++.|++.+..++. ..++
T Consensus 172 ~~A~~~~~~~~~~~vLVV~~E~~S~~~~~~~d~~~~~~v~~~LFGDGAaAvVl~~~~~~~~~~~~~~i~~~~~~~~~~t~ 251 (393)
T PLN03172 172 RLAKDLAENNAGSRVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAVIIGADPDTKIERPLFEIVSAAQTILPDSD 251 (393)
T ss_pred HHHHHHHHcCCCCeEEEEEEehhhhhhcccccccHHhhhccchhcCceEEEEEecCCCCcccCceeEEeeeccEEecCCc
Confidence 999999999999999999999999756555553 4566889999999999999865421 23457776654333 3444
Q ss_pred cccccceeecccCCCceeeeechhHHHHHHHHhhhhhhhcCCCccchhHHHHHHHHHHHHhhhcc-ccCCcccchhcccc
Q 011007 308 DKAYRCVFEEEDKEGKVGISLSKDLMAIAGEALKSNITTIGPLVLPASEQLLFLMTLIGRKIFNP-KWKPYIPDFKQAFE 386 (496)
Q Consensus 308 ~~~~~~~~~~~d~~G~~g~~ls~d~~~v~g~~l~~~i~~~gp~vlp~~e~~~~~~~~~~~~v~~~-~~~~~~p~~~~did 386 (496)
+.....+.. +++++.+++++|..+.+.++..+ +++++. .+. ..|++
T Consensus 252 ~~~~~~i~~-----~G~~~~l~~~vp~~~~~~i~~~~----------------------~~~L~~~gl~------~~di~ 298 (393)
T PLN03172 252 GAIDGHLRE-----VGLTFHLLKDVPGLISKNIEKSL----------------------VEAFAPIGIN------DWNSI 298 (393)
T ss_pred ccccceEEc-----CCcEEEEechHHHHHHHHHHHHH----------------------HHHhhhcCCC------ccccc
Confidence 433222221 23467788999987765433322 223321 222 37899
Q ss_pred EEEeccCCHHHHHHHHHHcCCChhhHhhhhhhhcccCCccCCchHHHHHHHH----HhCCCCCC---CEEEEEeechhHh
Q 011007 387 HFCIHAGGRAVIDELQKNLQLSAEHVEASRMTLHRFGNTSSSSLWYEMSYIE----EKGRMKKG---DRVWQIAFGSGFK 459 (496)
Q Consensus 387 ~f~~H~~~~~v~~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~----~~g~i~~G---d~Vll~~fG~G~~ 459 (496)
+|++||+|+++++.+++.||++++++.+|++++++||||||+|+++.|+++. ++|++++| |+++++|||+|++
T Consensus 299 ~~~~Hqgg~~Il~~v~~~Lgl~~~~~~~s~~vl~~yGNtSSaSv~~vL~~~~~~~~~~g~~~~G~~~~~~ll~afGpG~t 378 (393)
T PLN03172 299 FWIAHPGGPAILDQVEIKLDLKEEKLRATRHVLSDYGNMSSACVLFILDEMRKKSIEEGKGSTGEGLEWGVLFGFGPGLT 378 (393)
T ss_pred eEEecCCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhCccHHhHHHHHHHHHHhhhhhcCCCCCCCCcceEEEEEeCCcce
Confidence 9999999999999999999999999999999999999999999999999986 45788777 8999999999999
Q ss_pred hhheeeEee
Q 011007 460 CNSAVWKCN 468 (496)
Q Consensus 460 ~~sav~r~~ 468 (496)
|+++++||.
T Consensus 379 ~~~~ll~~~ 387 (393)
T PLN03172 379 VETVVLHSV 387 (393)
T ss_pred eeeeeeEec
Confidence 999999995
No 10
>PLN03168 chalcone synthase; Provisional
Probab=100.00 E-value=1.7e-50 Score=422.36 Aligned_cols=348 Identities=17% Similarity=0.253 Sum_probs=261.7
Q ss_pred CceEEEEeeeecCCCCcccChHHHHHHHhhhhc--CCcchHHHHHHHHHHcCCCceeecC-CC---CcC------CC-CC
Q 011007 86 RHVYLVDYACYKPPVTCRVPFATFMEHSRLILK--NNPKSVEFQMRILERSGLGEETCLP-PA---IHY------IP-PT 152 (496)
Q Consensus 86 ~~v~Iv~~~~y~P~~~~~v~~~~~~e~~~~~~~--~~~~~~~f~~~i~~~sGi~~r~~~~-~~---~~~------~~-~~ 152 (496)
.+.+|.++|+..|+ +.++++++.+.+..... ..++..+.+++|++++||++|+..- ++ .+. .| ..
T Consensus 14 ~~~~i~~i~ta~P~--~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~ps~~ 91 (389)
T PLN03168 14 GPACVLGIGTAVPP--AEFLQSEYPDFFFNITNCGEKEALKAKFKRICDKSGIRKRHMFLTEEVLKANPGICTYMEPSLN 91 (389)
T ss_pred CCeEEEEEeccCCC--cccCHHHHHHHHHHhccccCcHHHHHHHHHHHHhcCCCeeeeeccccchhhCcccccccCCCHH
Confidence 46899999999999 89999999998765321 0122233367899999999999743 21 111 01 13
Q ss_pred CchHHHHHhHHHHHHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCCc-eeeEecCCCcchHHHHH
Q 011007 153 PTMEAARGEAELVIFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSNI-KSFNLSGMGCSAGLISI 231 (496)
Q Consensus 153 ~~~~~~~~ea~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~~-~~~dl~g~gCsg~l~al 231 (496)
..++.+.+++.+|+.+|+++||+++|++|+|||+||++|++++..|+++++|+++||+++++ +++|++ +||+||+.||
T Consensus 92 ~r~~~~~~~a~~La~~Aa~~AL~~ag~~~~dId~lI~~T~Tg~~~Ps~a~~l~~~LGl~~~~~r~~d~~-~gC~g~~~aL 170 (389)
T PLN03168 92 VRHDIVVVQVPKLAAEAAQKAIKEWGGRKSDITHIVFATTSGVNMPGADHALAKLLGLKPTVKRVMMYQ-TGCFGGASVL 170 (389)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCccHHHHHHHHhCcCCcceeeeeeC-CccHHHHHHH
Confidence 35677899999999999999999999999999999999876677999999999999999765 489999 8999999999
Q ss_pred HHHHHHHhcCCCCEEEEEEECCCCCCCccCCC--ccccccccccccccEEEEEeccCCcc-cccceeEeeEEEEEec-CC
Q 011007 232 DLARDLLQVHPNSNAVVVSTEIITPNYYQGNE--RAMLLPNCLFRMGGAAILLSNRRRNR-SRAKYRLVHVVRTHKG-AD 307 (496)
Q Consensus 232 ~lA~~lL~~~~~~~aLVVs~E~~s~~~~~~~d--r~~l~~~~lfgDGAaA~lLs~~~~~~-~~~~~~L~~~~~t~~~-~d 307 (496)
++|++++++++.++||||++|.+|.++....+ .+.++++++|||||+|+||++++... .++.+++.....+... ++
T Consensus 171 ~~A~~~i~~~~~~~VLVV~~E~~S~~~~~~~~~~~~~~~~~~LFGDGAaAvvl~~~~~~~~~~~~~~~~~~~~~~~p~s~ 250 (389)
T PLN03168 171 RVAKDLAENNKGARVLAVASEVTAVTYRAPSENHLDGLVGSALFGDGAGVYVVGSDPKPEVEKALFEVHWAGETILPESD 250 (389)
T ss_pred HHHHHHHHhCCCCEEEEEEEehhhhhccCcccccHHHHhccccccCccEEEEEecCCCCccCCcceEEEeeeeEEEcCCC
Confidence 99999999999999999999999986543222 33456789999999999999865321 1123443322222121 22
Q ss_pred cccccceeecccCCCceeeeechhHHHHHHHHhhhhhhhcCCCccchhHHHHHHHHHHHHhhhcc-ccCCcccchhcccc
Q 011007 308 DKAYRCVFEEEDKEGKVGISLSKDLMAIAGEALKSNITTIGPLVLPASEQLLFLMTLIGRKIFNP-KWKPYIPDFKQAFE 386 (496)
Q Consensus 308 ~~~~~~~~~~~d~~G~~g~~ls~d~~~v~g~~l~~~i~~~gp~vlp~~e~~~~~~~~~~~~v~~~-~~~~~~p~~~~did 386 (496)
+.. .... + +.++.+.+++++|.+..+.++..+ ++.++. ... ..|++
T Consensus 251 ~~~--~~~~--~-~~g~~~~l~~~vp~~i~~~~~~~l----------------------~~~l~~~~~~------~~d~~ 297 (389)
T PLN03168 251 GAI--DGHL--T-EAGLIFHLMKDVPGLISKNIEKFL----------------------NEARKCVGSP------DWNEM 297 (389)
T ss_pred Ccc--CceE--e-cCceEEEECHHHHHHHHHHHHHHH----------------------HHHHHhcCCC------ccccc
Confidence 210 0000 1 122446667777766543222211 122211 111 25778
Q ss_pred EEEeccCCHHHHHHHHHHcCCChhhHhhhhhhhcccCCccCCchHHHHHHHHHhCCCCCC--------CEEEEEeechhH
Q 011007 387 HFCIHAGGRAVIDELQKNLQLSAEHVEASRMTLHRFGNTSSSSLWYEMSYIEEKGRMKKG--------DRVWQIAFGSGF 458 (496)
Q Consensus 387 ~f~~H~~~~~v~~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~i~~G--------d~Vll~~fG~G~ 458 (496)
+|++||+|++|++.++++||+++|++..|+.++++||||||+|+++.|+++.++ ++++| |+++++|||+||
T Consensus 298 ~~v~Hqgg~~Il~~v~~~Lgl~~ek~~~s~~vl~~yGNtSSaSv~~vL~~~~~~-~~~~g~~~~~~g~~~~ll~afGpG~ 376 (389)
T PLN03168 298 FWAVHPGGPAILDQVEAKLKLTKDKMQGSRDILSEFGNMSSASVLFVLDQIRQR-SVKMGASTLGEGSEFGFFIGFGPGL 376 (389)
T ss_pred eEEecCCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhCccHhhhHHHHHHHHHHH-HhhcCCCCCCCCccEEEEEEEcchh
Confidence 999999999999999999999999999999999999999999999999998765 66655 899999999999
Q ss_pred hhhheeeEeecc
Q 011007 459 KCNSAVWKCNKT 470 (496)
Q Consensus 459 ~~~sav~r~~~~ 470 (496)
+|+++++||..+
T Consensus 377 t~~~~llr~~~~ 388 (389)
T PLN03168 377 TLEVLVLRAAAN 388 (389)
T ss_pred hhhhhhheeccc
Confidence 999999999654
No 11
>PLN03169 chalcone synthase family protein; Provisional
Probab=100.00 E-value=1.6e-50 Score=423.28 Aligned_cols=352 Identities=17% Similarity=0.279 Sum_probs=261.4
Q ss_pred hcCCCceEEEEeeeecCCCCcccChHHHHHHHhhhhcCCcchH-HHHHHHHHHcCCCceeecCCCC----c---CCCC--
Q 011007 82 MSKPRHVYLVDYACYKPPVTCRVPFATFMEHSRLILKNNPKSV-EFQMRILERSGLGEETCLPPAI----H---YIPP-- 151 (496)
Q Consensus 82 ~~~~~~v~Iv~~~~y~P~~~~~v~~~~~~e~~~~~~~~~~~~~-~f~~~i~~~sGi~~r~~~~~~~----~---~~~~-- 151 (496)
.+.|.+++|.++|+++|+ ++++|+++.+.+.....-+++++ +.+++|++++||++|+++.+++ + ..+.
T Consensus 16 ~~~~~~~~I~gigt~~P~--~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~tGI~~R~~~~~~~~~~~~~~~~~~~~~ 93 (391)
T PLN03169 16 AANPGKATILALGKAFPS--QLVPQEYLVDGYFRDTKCDDPALKEKLERLCKTTTVKTRYVVMSKEILDKYPELATEGTP 93 (391)
T ss_pred cCCCCCeEEEEEEeeCCC--eecCHHHHHHHHHHHhcccCHHHHHHHHHHHHhCCcceeeEeccccchhhCccccccCCC
Confidence 456778999999999999 89999999986543211123332 3357899999999999874321 0 0111
Q ss_pred --CCchHHHHHhHHHHHHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCCc-eeeEecCCCcchHH
Q 011007 152 --TPTMEAARGEAELVIFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSNI-KSFNLSGMGCSAGL 228 (496)
Q Consensus 152 --~~~~~~~~~ea~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~~-~~~dl~g~gCsg~l 228 (496)
...+..+.+.+.+|+.+|+++||+++|++|+|||+||++|++++..|+++.+|+++||+++++ .++|++ +||+|++
T Consensus 94 ~~~~r~~~~~e~~~~La~~Aa~~aL~~ag~~~~dId~lI~~t~t~~~~P~~a~~l~~~LGl~~~~~~~~d~~-~gC~g~~ 172 (391)
T PLN03169 94 TIKQRLDIANEAVTQMAVEASLACIKEWGRPVSDITHLVYVSSSEARLPGGDLYLAKQLGLSPDVQRVMLYF-LGCSGGV 172 (391)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHCCEEEEECcCCCCCCcHHHHHHHHhCcCCcceeeeccc-ChhHHHH
Confidence 123344678899999999999999999999999999999888999999999999999998776 479999 7999999
Q ss_pred HHHHHHHHHHhcCCCCEEEEEEECCCCCCCccCCC--ccccccccccccccEEEEEeccCCcc-cccceeEeeEEEEEec
Q 011007 229 ISIDLARDLLQVHPNSNAVVVSTEIITPNYYQGNE--RAMLLPNCLFRMGGAAILLSNRRRNR-SRAKYRLVHVVRTHKG 305 (496)
Q Consensus 229 ~al~lA~~lL~~~~~~~aLVVs~E~~s~~~~~~~d--r~~l~~~~lfgDGAaA~lLs~~~~~~-~~~~~~L~~~~~t~~~ 305 (496)
.||++|.+++++++.++||||++|..|.++....+ .....++++|||||+|+||++++... ....|++........
T Consensus 173 ~aL~~A~~~~~~~~~~~vLvv~~e~~s~~~~~~~~~~~~d~~~~~lFGDGAaA~vl~~~~~~~~~~~~~~l~~~~~~~i- 251 (391)
T PLN03169 173 AGLRVAKDIAENNPGSRVLLTTSETTILGFRPPSPDRPYDLVGAALFGDGAAAVIIGADPIPVSESPFFELHTAIQQFL- 251 (391)
T ss_pred HHHHHHHHHHHhCCCCeEEEEEEEcChhhccCCCccchhhhhhhhhccCceEEEEEecCCCcccCCcceEEEeeeeeEc-
Confidence 99999999999999999999999998875532111 22334678999999999999865421 112333322111111
Q ss_pred CCcccccceeecccCCCceeeeechhHHHHHHHHhhhhhhhcCCCccchhHHHHHHHHHHHHhhhcc-ccCCcccchhcc
Q 011007 306 ADDKAYRCVFEEEDKEGKVGISLSKDLMAIAGEALKSNITTIGPLVLPASEQLLFLMTLIGRKIFNP-KWKPYIPDFKQA 384 (496)
Q Consensus 306 ~d~~~~~~~~~~~d~~G~~g~~ls~d~~~v~g~~l~~~i~~~gp~vlp~~e~~~~~~~~~~~~v~~~-~~~~~~p~~~~d 384 (496)
.++. +.+......+ ++.+.+++++|....+.+... .+++++. .+. .+|
T Consensus 252 p~~~--~~~~~~~~~~-g~~~~~g~~v~~~~~~~~~~~----------------------i~~~L~~~gl~------~~d 300 (391)
T PLN03169 252 PGTE--KTIDGRLTEE-GINFKLGRELPQKIEDNIEGF----------------------CKKLMKKAGLV------EKD 300 (391)
T ss_pred CCCc--cccCceecCC-ceEEEECcHHHHHHHHHHHHH----------------------HHHHHHHcCCC------CCC
Confidence 1110 0110001111 233456677776554322211 1334432 222 256
Q ss_pred cc--EEEeccCCHHHHHHHHHHcCCChhhHhhhhhhhcccCCccCCchHHHHHHHHHhCCCC---CCCEEEEEeechhHh
Q 011007 385 FE--HFCIHAGGRAVIDELQKNLQLSAEHVEASRMTLHRFGNTSSSSLWYEMSYIEEKGRMK---KGDRVWQIAFGSGFK 459 (496)
Q Consensus 385 id--~f~~H~~~~~v~~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~i~---~Gd~Vll~~fG~G~~ 459 (496)
+| +|++||+|+++++.+++.||++++++.+|++++++||||||+|+|+.|++++++++++ +||++++++||+||+
T Consensus 301 id~~~~v~Hq~n~~il~~v~~~Lgl~~ek~~~s~~~l~~~GNtsSasip~~L~~~~~~~~~~~~~~gd~~ll~afG~G~s 380 (391)
T PLN03169 301 YNDLFWAVHPGGPAILNRLEKKLKLAPEKLECSRRALMDYGNVSSNTIVYVLEYMREELKKKGEEDEEWGLILAFGPGIT 380 (391)
T ss_pred CCcceEEecCCCHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchHhHHHHHHHHHHHhhcccCCCCCcEEEEEEEcccHh
Confidence 77 9999999999999999999999999998999999999999999999999999888876 699999999999999
Q ss_pred hhheeeEee
Q 011007 460 CNSAVWKCN 468 (496)
Q Consensus 460 ~~sav~r~~ 468 (496)
|+++++|+.
T Consensus 381 ~~~~ll~~~ 389 (391)
T PLN03169 381 FEGILARNL 389 (391)
T ss_pred HHHHHHhhh
Confidence 999999974
No 12
>PLN03173 chalcone synthase; Provisional
Probab=100.00 E-value=1.9e-50 Score=421.81 Aligned_cols=349 Identities=20% Similarity=0.275 Sum_probs=268.3
Q ss_pred CceEEEEeeeecCCCCcccChHHHHHHHhhhhc--CCcchHHHHHHHHHHcCCCceeecCCCC----c---CC---C-CC
Q 011007 86 RHVYLVDYACYKPPVTCRVPFATFMEHSRLILK--NNPKSVEFQMRILERSGLGEETCLPPAI----H---YI---P-PT 152 (496)
Q Consensus 86 ~~v~Iv~~~~y~P~~~~~v~~~~~~e~~~~~~~--~~~~~~~f~~~i~~~sGi~~r~~~~~~~----~---~~---~-~~ 152 (496)
.+++|.++|+..|+ ++++++++.+.+..... -.++..+.+++|++++||++|+..-+.+ + .. | .+
T Consensus 15 ~~~~i~~i~ta~P~--~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~p~~~ 92 (391)
T PLN03173 15 GPATIMAIGTSTPP--NCVDQSTYPDYYFRITNSEHKVELKEKFKRMCEKSMIKKRYMHLTEEILKENPSVCEYMAPSLD 92 (391)
T ss_pred CCeEEEEEEccCCC--cccCHHHHHHHHHHHhccccchhHHHHHHHHHHhCCCCeeeEeccchhhhhCcccccccCCCHH
Confidence 45899999999999 89999999998765321 1122233367899999999998743211 1 11 1 13
Q ss_pred CchHHHHHhHHHHHHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCCcee-eEecCCCcchHHHHH
Q 011007 153 PTMEAARGEAELVIFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSNIKS-FNLSGMGCSAGLISI 231 (496)
Q Consensus 153 ~~~~~~~~ea~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~~~~-~dl~g~gCsg~l~al 231 (496)
..++.+.+++.+|+.+|+++||+++|++|+|||+||++|+++...|+++..|+++||+++++.. ++++ +||+|++.||
T Consensus 93 ~r~~~~~~~a~~La~~Aa~~AL~~ag~~~~dId~li~~t~t~~~~P~~a~~l~~~LGl~~~~~~~~~~~-~gC~g~~~aL 171 (391)
T PLN03173 93 ARQDMVVVEVPKLGKEAAAKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRSSVKRFMMYQ-QGCFAGGTVL 171 (391)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCcccHHHHHHHHHhCCCccceeeehhc-CccHHHHHHH
Confidence 3566788999999999999999999999999999999987665689999999999999977754 4556 8999999999
Q ss_pred HHHHHHHhcCCCCEEEEEEECCCCCCCccCCCc--cccccccccccccEEEEEeccCCcc-cccceeEeeEEEEE-ecCC
Q 011007 232 DLARDLLQVHPNSNAVVVSTEIITPNYYQGNER--AMLLPNCLFRMGGAAILLSNRRRNR-SRAKYRLVHVVRTH-KGAD 307 (496)
Q Consensus 232 ~lA~~lL~~~~~~~aLVVs~E~~s~~~~~~~dr--~~l~~~~lfgDGAaA~lLs~~~~~~-~~~~~~L~~~~~t~-~~~d 307 (496)
++|++++++++.++||||++|.+|.++++++|+ +.++++++|||||+|+||++++... .++.|++.+..++. ..++
T Consensus 172 ~~A~~~~~~~~~~~vLVV~~E~~S~~~~~~~d~~~~~~v~~~LFGDGAaAvvl~~~~~~~~~~~~~~l~~~~~~~~~~t~ 251 (391)
T PLN03173 172 RLAKDLAENNKGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAIIIGSDPVLGVEKPLFELVSAAQTILPDSD 251 (391)
T ss_pred HHHHHHHHhCCCCeEEEEEEehhhhhhCCccccchhhhhhhhhhcCceEEEEEeCCCCCCcCCcceEEEeeeeEEecCCc
Confidence 999999999999999999999999756555553 3456789999999999999854321 12356765543322 2444
Q ss_pred cccccceeecccCCCceeeeechhHHHHHHHHhhhhhhhcCCCccchhHHHHHHHHHHHHhhhcc-ccCCcccchhcccc
Q 011007 308 DKAYRCVFEEEDKEGKVGISLSKDLMAIAGEALKSNITTIGPLVLPASEQLLFLMTLIGRKIFNP-KWKPYIPDFKQAFE 386 (496)
Q Consensus 308 ~~~~~~~~~~~d~~G~~g~~ls~d~~~v~g~~l~~~i~~~gp~vlp~~e~~~~~~~~~~~~v~~~-~~~~~~p~~~~did 386 (496)
+.....+ .. +++++.+++++|..+.+.+...+ ++++++ .+. ..|+|
T Consensus 252 ~~~~~~i-~~----~G~~~~l~~~vp~~~~~~~~~~i----------------------~~~L~~~gl~------~~di~ 298 (391)
T PLN03173 252 GAIDGHL-RE----VGLTFHLLKDVPGLISKNVEKSL----------------------TEAFKPLGIS------DWNSL 298 (391)
T ss_pred cceeeEE-Ec----CceEEEEecHHHHHHHHHHHHHH----------------------HHHHHhcCCC------ccccC
Confidence 4322111 11 23467788888887654333222 233322 222 37999
Q ss_pred EEEeccCCHHHHHHHHHHcCCChhhHhhhhhhhcccCCccCCchHHHHHHHHHh----CCCCCC---CEEEEEeechhHh
Q 011007 387 HFCIHAGGRAVIDELQKNLQLSAEHVEASRMTLHRFGNTSSSSLWYEMSYIEEK----GRMKKG---DRVWQIAFGSGFK 459 (496)
Q Consensus 387 ~f~~H~~~~~v~~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~----g~i~~G---d~Vll~~fG~G~~ 459 (496)
+|++||+|+++++.+++.||++++|+.+|++++++||||||+|+|+.|++++++ |.+++| ++++++|||+||+
T Consensus 299 ~~v~Hqgg~~Il~~v~~~LgL~~ekl~~s~~vl~~yGNtSSaSv~~vL~~~~~~~~~~~~~~~g~~~~~~l~~afGpG~t 378 (391)
T PLN03173 299 FWIAHPGGPAILDQVEAKLALKPEKLRATRHVLSEYGNMSSACVLFILDEMRKKSAEDGLKSTGEGLEWGVLFGFGPGLT 378 (391)
T ss_pred eEEECCCcHHHHHHHHHHcCCChHHHHHHHHHHHHhCcchhhHHHHHHHHHHHhhhhcCCCCCCCCcceEEEEEeCchHH
Confidence 999999999999999999999999999999999999999999999999999853 444433 8899999999999
Q ss_pred hhheeeEeecc
Q 011007 460 CNSAVWKCNKT 470 (496)
Q Consensus 460 ~~sav~r~~~~ 470 (496)
++++++||..+
T Consensus 379 ~e~~ll~~~~~ 389 (391)
T PLN03173 379 VETVVLHSVAP 389 (391)
T ss_pred HHHHHHhhccC
Confidence 99999998654
No 13
>PLN03171 chalcone synthase-like protein; Provisional
Probab=100.00 E-value=3.7e-49 Score=413.87 Aligned_cols=353 Identities=18% Similarity=0.258 Sum_probs=260.9
Q ss_pred CCceEEEEeeeecCCCCcccChHHHHHHHhhhhcCCcc---hHHHHHHHHHHcCCCceeecCCCC----c------CC-C
Q 011007 85 PRHVYLVDYACYKPPVTCRVPFATFMEHSRLILKNNPK---SVEFQMRILERSGLGEETCLPPAI----H------YI-P 150 (496)
Q Consensus 85 ~~~v~Iv~~~~y~P~~~~~v~~~~~~e~~~~~~~~~~~---~~~f~~~i~~~sGi~~r~~~~~~~----~------~~-~ 150 (496)
+.+++|+++|+|+|+ ++++|+++.+++..... +++ ..+.++||++++||++||++.+++ . .. .
T Consensus 20 ~~~~~I~gigt~~P~--~~v~n~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~tGI~~R~~~~~~~~~~~~~~~~~~~~~~ 96 (399)
T PLN03171 20 DGLAAVLAIGTANPA--NCVPQDEFPDFYFRATK-SDHLTALKDKFKRICQELGVQKRYLHHTEELLSAHPEFLDHDAPS 96 (399)
T ss_pred CCCcEEEEEEeeCCC--cccCHHHHHHHHHHHhc-ccccHHHHHHHHHHHHhcCCCceeEeccccccccCccccccCCCC
Confidence 356999999999999 89999999987532111 122 122357899999999999987642 0 01 1
Q ss_pred CCCchHHHHHhHHHHHHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCCce-eeEecCCCcchHHH
Q 011007 151 PTPTMEAARGEAELVIFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSNIK-SFNLSGMGCSAGLI 229 (496)
Q Consensus 151 ~~~~~~~~~~ea~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~~~-~~dl~g~gCsg~l~ 229 (496)
....++.+.+.+.+|+++|++++|+++|++|+|||+||++|+++...|+++.+|+++||++.++. ++++. +||+|++.
T Consensus 97 ~~~r~~~~~~~a~~la~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~P~~a~~v~~~LGl~~~~~~~~~~~-~gC~g~~~ 175 (399)
T PLN03171 97 LDARLDIAADAVPELAAEAAKKAIAEWGRPAADITHLVVTTNSGAHIPGVDFRLVPLLGLRPSVRRTMLHL-NGCFAGAA 175 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCchHHHHHHHhCCCcccceeeccC-CccHHHHH
Confidence 22356678889999999999999999999999999999998665458999999999999986653 56666 69999999
Q ss_pred HHHHHHHHHhcCCCCEEEEEEECCCCCCCccCCCcc---ccccccccccccEEEEEeccCCcccccceeEeeEEEEEecC
Q 011007 230 SIDLARDLLQVHPNSNAVVVSTEIITPNYYQGNERA---MLLPNCLFRMGGAAILLSNRRRNRSRAKYRLVHVVRTHKGA 306 (496)
Q Consensus 230 al~lA~~lL~~~~~~~aLVVs~E~~s~~~~~~~dr~---~l~~~~lfgDGAaA~lLs~~~~~~~~~~~~L~~~~~t~~~~ 306 (496)
||++|.+|+++++.++||||++|.+|.. +++.|++ .++++++|||||+|+||+++++...+..|++...... .
T Consensus 176 aL~~A~~li~~~~~~~vLVv~~e~~s~~-~~~~d~~~~~~~v~~~LFGDGAaA~vl~~~~~~~~~~~~~l~~~~~~---~ 251 (399)
T PLN03171 176 ALRLAKDLAENNRGARVLVVAAEITLLL-FNGPDEGCFQTLLNQGLFGDGAAAVIVGADADAAERPLFEIVSAAQA---I 251 (399)
T ss_pred HHHHHHHHHHhCCCCeEEEEEEeccccc-cCCCCcccHHhhhccccccCccEEEEEecCCCCCCCCceEEEEeeeE---E
Confidence 9999999999999999999999999974 3444443 3445789999999999998764322234555543222 2
Q ss_pred CcccccceeecccCCCceeeeec-hhHHHHHHHHhhhhhhhcCCCccchhHHHHHHHHHHHHhhh-ccccCCcccchhcc
Q 011007 307 DDKAYRCVFEEEDKEGKVGISLS-KDLMAIAGEALKSNITTIGPLVLPASEQLLFLMTLIGRKIF-NPKWKPYIPDFKQA 384 (496)
Q Consensus 307 d~~~~~~~~~~~d~~G~~g~~ls-~d~~~v~g~~l~~~i~~~gp~vlp~~e~~~~~~~~~~~~v~-~~~~~~~~p~~~~d 384 (496)
+++.++.+....+ +++....++ +.+|...++.++..+.. .+.+.+- ...+. .+|
T Consensus 252 ~p~~~~~~~~~~~-~~g~~~~~~~~~vp~~i~~~l~~~l~~-----------------~l~~~~~~~~g~~------~~d 307 (399)
T PLN03171 252 IPESDDAINMHFT-EGGLDGNIGTRQVPGLIGDNIERCLLD-----------------AFAPLLGGDGGAE------WND 307 (399)
T ss_pred ecCCchheEEEEE-cCCceEEECchhHHHHHHHHHHHHHHH-----------------HHHhhcccccCCC------ccc
Confidence 3333333322111 122222444 66766554433322210 0000000 00111 367
Q ss_pred ccEEEeccCCHHHHHHHHHHcCCChhhHhhhhhhhcccCCccCCchHHHHHHHHHhCC--CCCC---CEEEEEeechhHh
Q 011007 385 FEHFCIHAGGRAVIDELQKNLQLSAEHVEASRMTLHRFGNTSSSSLWYEMSYIEEKGR--MKKG---DRVWQIAFGSGFK 459 (496)
Q Consensus 385 id~f~~H~~~~~v~~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~--i~~G---d~Vll~~fG~G~~ 459 (496)
++|+ +||+|+++++.++++||++++|+.+|++++++||||||+|+|+.|+++.++++ +++| |+++++|||+|++
T Consensus 308 i~~~-~Hq~~~~il~~v~~~Lgl~~ek~~~s~~~l~~yGNtssaSip~~L~~~~~~~~~~~~~G~~~d~vll~~fG~Glt 386 (399)
T PLN03171 308 LFWA-VHPGSSAILDQVDAALGLEPEKLAASRRVLSDYGNMFGATVIFALDELRRQMEEAAAAGAWPELGVMMAFGPGLT 386 (399)
T ss_pred ceEE-EcCCcHHHHHHHHHHcCCCHHHhHHHHHHHHHhCcchhhhHHHHHHHHHhhHhhcCCCCCCcceEEEEEEcccHH
Confidence 8766 69999999999999999999999999999999999999999999999988774 6888 9999999999999
Q ss_pred hhheeeEeecc
Q 011007 460 CNSAVWKCNKT 470 (496)
Q Consensus 460 ~~sav~r~~~~ 470 (496)
|++++|++.+.
T Consensus 387 ~~~~ll~~~~~ 397 (399)
T PLN03171 387 VDAMLLHASGH 397 (399)
T ss_pred HHHHHhhcccC
Confidence 99999998653
No 14
>PLN03170 chalcone synthase; Provisional
Probab=100.00 E-value=3.6e-49 Score=413.72 Aligned_cols=350 Identities=19% Similarity=0.266 Sum_probs=266.4
Q ss_pred CceEEEEeeeecCCCCcccChHHHHHHHhhhhcC-CcchHH-HHHHHHHHcCCCceeecCCCC----cCC------C-CC
Q 011007 86 RHVYLVDYACYKPPVTCRVPFATFMEHSRLILKN-NPKSVE-FQMRILERSGLGEETCLPPAI----HYI------P-PT 152 (496)
Q Consensus 86 ~~v~Iv~~~~y~P~~~~~v~~~~~~e~~~~~~~~-~~~~~~-f~~~i~~~sGi~~r~~~~~~~----~~~------~-~~ 152 (496)
.+.+|.++|+..|+ ++++++++.+.+...... +....+ .+++|++++||++|+..-+++ ... | ..
T Consensus 19 ~~~~i~~i~ta~P~--~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~p~~~ 96 (401)
T PLN03170 19 GPATVLAIGTATPA--NCVHQADYPDYYFRITKSEHMTELKEKFKRMCDKSQIRKRYMHLTEEYLAENPNMCAYMAPSLD 96 (401)
T ss_pred CCeEEEEEeecCCC--ccccHHHHHHHHHHHccccCchhHHHHHHHHHHhCCCCceeEeccccchhhCccccccCCCCHH
Confidence 34889999999999 899999999987753311 112233 367899999999999754211 100 1 13
Q ss_pred CchHHHHHhHHHHHHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCCc-eeeEecCCCcchHHHHH
Q 011007 153 PTMEAARGEAELVIFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSNI-KSFNLSGMGCSAGLISI 231 (496)
Q Consensus 153 ~~~~~~~~ea~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~~-~~~dl~g~gCsg~l~al 231 (496)
..++.+.+++.+|+.+|+++||+++|++++|||+||++|++++..|+++.+|+++||+++++ +++|++ +||+|++.||
T Consensus 97 ~r~~~~~~~a~~La~~Aa~~AL~~ag~~~~dId~lI~~T~Tg~~~Ps~a~~l~~~LGl~~~~~r~~d~~-~gC~G~~~aL 175 (401)
T PLN03170 97 ARQDIVVVEVPKLGKAAAQKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKMLGLRPSVNRLMMYQ-QGCFAGGTVL 175 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCCCChHHHHHHHHhCcCcccHHHHhhc-ChhHHHHHHH
Confidence 35667889999999999999999999999999999998876666999999999999999766 489999 8999999999
Q ss_pred HHHHHHHhcCCCCEEEEEEECCCCCCCccCCC--ccccccccccccccEEEEEeccCCcc-cccceeEeeEEEEEecCCc
Q 011007 232 DLARDLLQVHPNSNAVVVSTEIITPNYYQGNE--RAMLLPNCLFRMGGAAILLSNRRRNR-SRAKYRLVHVVRTHKGADD 308 (496)
Q Consensus 232 ~lA~~lL~~~~~~~aLVVs~E~~s~~~~~~~d--r~~l~~~~lfgDGAaA~lLs~~~~~~-~~~~~~L~~~~~t~~~~d~ 308 (496)
++|++++++++.++||||++|.+|.++..+++ .+.++++++|||||+|+||++++... .++.|++........ .+.
T Consensus 176 ~~A~~l~~~~~~~~vLVV~~E~~S~~~~~~~~~~~~~~~~~~LFGDGAaAvVl~~~~~~~~~~~~~~l~~~~~~~~-p~~ 254 (401)
T PLN03170 176 RVAKDLAENNRGARVLVVCSEITAVTFRGPSESHLDSMVGQALFGDGAAAVIVGADPDERVERPLFQLVSASQTIL-PDS 254 (401)
T ss_pred HHHHHHHHcCCCCeEEEEEEehhhhccCCcccchhhhhhhhhhhhceeEEEEEecCCcccccCCceEEeeccceEe-cCC
Confidence 99999999999999999999999986643332 23455788999999999999865421 112355543211111 111
Q ss_pred ccccceeecccCCCceeeeechhHHHHHHHHhhhhhhhcCCCccchhHHHHHHHHHHHHhhhcc-ccCCcccchhccccE
Q 011007 309 KAYRCVFEEEDKEGKVGISLSKDLMAIAGEALKSNITTIGPLVLPASEQLLFLMTLIGRKIFNP-KWKPYIPDFKQAFEH 387 (496)
Q Consensus 309 ~~~~~~~~~~d~~G~~g~~ls~d~~~v~g~~l~~~i~~~gp~vlp~~e~~~~~~~~~~~~v~~~-~~~~~~p~~~~did~ 387 (496)
+.+..... . +.++.+.+++++|....+.+...+ +++++. .+. .+|+++
T Consensus 255 ~~~~~~~i--~-~~G~~~~l~~~vp~~~~~~i~~~v----------------------~~~L~~~gl~------~~di~~ 303 (401)
T PLN03170 255 EGAIDGHL--R-EVGLTFHLLKDVPGLISKNIERSL----------------------EEAFKPLGIT------DYNSIF 303 (401)
T ss_pred cccccceE--E-cCCeEEEEehHHHHHHHHHHHHHH----------------------HHHHHhcCCC------ccccCe
Confidence 11100000 1 122456678888876654332221 233322 222 378999
Q ss_pred EEeccCCHHHHHHHHHHcCCChhhHhhhhhhhcccCCccCCchHHHHHHHH----HhCCCCCC---CEEEEEeechhHhh
Q 011007 388 FCIHAGGRAVIDELQKNLQLSAEHVEASRMTLHRFGNTSSSSLWYEMSYIE----EKGRMKKG---DRVWQIAFGSGFKC 460 (496)
Q Consensus 388 f~~H~~~~~v~~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~----~~g~i~~G---d~Vll~~fG~G~~~ 460 (496)
|++||+|+++++.+++.||++++++.+|++++++||||||+|+++.|+++. ++|++++| |+++++|||+||+|
T Consensus 304 ~v~Hqgg~~il~~v~~~Lgl~~~~~~~s~~~l~~~GNtsSasv~~vL~~~~~~~~~~g~~~~G~~~~~~ll~afGpG~t~ 383 (401)
T PLN03170 304 WVAHPGGPAILDQVEAKVGLEKERMRATRHVLSEYGNMSSACVLFILDEMRKRSAEDGQATTGEGFDWGVLFGFGPGLTV 383 (401)
T ss_pred EEecCCcHHHHHHHHHHcCCChHHHHHHHHHHHHhCccHHhHHHHHHHHHHHhHhhcCCCCCCCCccEEEEEEeCchHhH
Confidence 999999999999999999999999999999999999999999999999986 46888888 89999999999999
Q ss_pred hheeeEeecc
Q 011007 461 NSAVWKCNKT 470 (496)
Q Consensus 461 ~sav~r~~~~ 470 (496)
+++++|+...
T Consensus 384 ~~~ll~~~~~ 393 (401)
T PLN03170 384 ETVVLHSVPI 393 (401)
T ss_pred HhHHheeccc
Confidence 9999999543
No 15
>PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=100.00 E-value=9.8e-49 Score=400.73 Aligned_cols=323 Identities=18% Similarity=0.267 Sum_probs=246.3
Q ss_pred CceEEEEeeeecCCCCcccChHHHHHHHhhhhcCCcchHHHHHHHHHHcCCCceeecCCCCcCCCCCCchHHHHHhHHHH
Q 011007 86 RHVYLVDYACYKPPVTCRVPFATFMEHSRLILKNNPKSVEFQMRILERSGLGEETCLPPAIHYIPPTPTMEAARGEAELV 165 (496)
Q Consensus 86 ~~v~Iv~~~~y~P~~~~~v~~~~~~e~~~~~~~~~~~~~~f~~~i~~~sGi~~r~~~~~~~~~~~~~~~~~~~~~ea~~l 165 (496)
.+++|+++++|+|+ ++++|+++.+..+. ++ +++.+++||.+|+++++++. +.+|
T Consensus 2 ~~~~I~~~g~~lP~--~~v~~~~~~~~~~~----~~------~~i~~~~Gi~~r~~~~~~e~--------------~~~l 55 (326)
T PRK05963 2 CSSRIAGFGHAVPD--RRVENAEIEAQLGL----ET------GWIERRTGIRCRRWAAPDET--------------LSDL 55 (326)
T ss_pred CccEEEEEEEECCC--CeecHHHHHHHcCC----CH------HHhhhccCCeEEEEcCCCCC--------------HHHH
Confidence 46899999999999 89999999987652 33 36889999999999887654 6899
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEeecc-CCCCCCcHHHHHHHHcCCCCCceeeEecCCCcchHHHHHHHHHHHHhcCCCC
Q 011007 166 IFSAMDSLLQKTGLKPKDIDILIVNCS-LFSPTPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLLQVHPNS 244 (496)
Q Consensus 166 a~~Aa~~aL~~agi~p~dID~LI~~ss-~~~~~Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL~~~~~~ 244 (496)
+.+||++||+++|++|+|||+||++|+ +++..|+.+.+|+++||++ ++.+||+++ ||+|++.||++|.++++++ .+
T Consensus 56 a~~Aa~~aL~~ag~~~~~Id~li~~t~~~d~~~p~~a~~v~~~Lg~~-~~~~~di~~-~C~g~~~aL~~A~~~l~~~-~~ 132 (326)
T PRK05963 56 AASAGDMALSDAGIERSDIALTLLATSTPDHLLPPSAPLLAHRLGLQ-NSGAIDLAG-ACAGFLYALVLADGFVRAQ-GK 132 (326)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCCcHHHHHHHHhCCC-CCceeeccc-hhhHHHHHHHHHHHHHHcC-CC
Confidence 999999999999999999999999864 6789999999999999998 689999995 9999999999999999987 48
Q ss_pred EEEEEEECCCCCCCccCCCccccccccccccccEEEEEeccCCcccccceeEeeEEEEEecCCcccccceeecccCCCce
Q 011007 245 NAVVVSTEIITPNYYQGNERAMLLPNCLFRMGGAAILLSNRRRNRSRAKYRLVHVVRTHKGADDKAYRCVFEEEDKEGKV 324 (496)
Q Consensus 245 ~aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAaA~lLs~~~~~~~~~~~~L~~~~~t~~~~d~~~~~~~~~~~d~~G~~ 324 (496)
+||||++|..+. +.+..++. +..+|||||+|+||++++... .. ++.+...++++.|+.+..+.+...
T Consensus 133 ~aLVv~~d~~s~-~~~~~~~~---~~~lfGDgA~A~ll~~~~~~~----~~---~l~~~~~t~~~~~~~~~~~~gg~~-- 199 (326)
T PRK05963 133 PVLVVAANILSR-RINMAERA---SAVLFADAAGAVVLAPSAKAN----SG---VLGSQLISDGSHYDLIKIPAGGSA-- 199 (326)
T ss_pred eEEEEEechhhc-cCCccccC---ceEEEeecceEEEEEecCCCC----Cc---eEEEEEEEcCCCCCeEEeCCCCcC--
Confidence 999999999886 34445554 568999999999999866431 12 333455667776665544432110
Q ss_pred eeeechhHHHHHHHHhhhhhh-hcCCCccchhHHHHHHHHHHHHhhhccccCCcccchhccccEEEeccCCHHHHHHHHH
Q 011007 325 GISLSKDLMAIAGEALKSNIT-TIGPLVLPASEQLLFLMTLIGRKIFNPKWKPYIPDFKQAFEHFCIHAGGRAVIDELQK 403 (496)
Q Consensus 325 g~~ls~d~~~v~g~~l~~~i~-~~gp~vlp~~e~~~~~~~~~~~~v~~~~~~~~~p~~~~did~f~~H~~~~~v~~~i~~ 403 (496)
.+.+.+.. .+ ...+. ..|+.+ +.+...... ...+++++. .+.-.+|||+|++||+|+++++.+.+
T Consensus 200 -~~~~~~~~---~~--~~~~~~~~~~~~--~~~~~~~~~-~~~~~~L~~-----~gl~~~did~~~~h~~~~~~~~~~~~ 265 (326)
T PRK05963 200 -RPFAPERD---AS--EFLMTMQDGRAV--FTEAVRMMS-GASQNVLAS-----AAMTPQDIDRFFPHQANARIVDKVCE 265 (326)
T ss_pred -CCCccccc---cc--ccceEecCCHHH--HHHHHHHHH-HHHHHHHHH-----cCCCHHHCCEEEeCCCCHHHHHHHHH
Confidence 00000000 00 00000 011110 001011011 111233332 12224899999999999999999999
Q ss_pred HcCCChhhHhhhhhhhcccCCccCCchHHHHHHHHHhCCCCCCCEEEEEeechhHhhhheeeEe
Q 011007 404 NLQLSAEHVEASRMTLHRFGNTSSSSLWYEMSYIEEKGRMKKGDRVWQIAFGSGFKCNSAVWKC 467 (496)
Q Consensus 404 ~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~i~~Gd~Vll~~fG~G~~~~sav~r~ 467 (496)
.||++++++ ..++++||||+|+|++++|++++++|++++||+|++++||+|++|+++|+||
T Consensus 266 ~l~l~~~k~---~~~l~~~Gn~~sas~~~~L~~~~~~~~~~~Gd~vll~~~G~G~~~~~~ll~~ 326 (326)
T PRK05963 266 TIGIPRAKA---ASTLETYGNSSAATIPLSLSLANLEQPLREGERLLFAAAGAGMTGGAVVMRV 326 (326)
T ss_pred HcCCCHHHh---hhhHHhhCcHHHHHHHHHHHHHHHhCCCCCCCEEEEEEEehhhhheeeEEeC
Confidence 999999998 6899999999999999999999999999999999999999999999999986
No 16
>COG3424 BcsA Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=5.5e-48 Score=375.12 Aligned_cols=346 Identities=25% Similarity=0.361 Sum_probs=279.6
Q ss_pred eEEEEeeeecCCCCcccChHHHHHHHhhhhcCCcchHHHHHHHHH-HcCCCceeecCCCCcCCCC---CCchHHHHHhHH
Q 011007 88 VYLVDYACYKPPVTCRVPFATFMEHSRLILKNNPKSVEFQMRILE-RSGLGEETCLPPAIHYIPP---TPTMEAARGEAE 163 (496)
Q Consensus 88 v~Iv~~~~y~P~~~~~v~~~~~~e~~~~~~~~~~~~~~f~~~i~~-~sGi~~r~~~~~~~~~~~~---~~~~~~~~~ea~ 163 (496)
.+|.++++++|+ +++++.|+.+.+.... ..++.+-+.+.+. +.+|.+|+..-|.+++..+ ...++-+.||+.
T Consensus 2 a~i~sv~t~~Pp--y~~~Qse~~d~f~~~~--~~~~~~~I~r~l~~~~~i~~R~~v~Pl~~y~e~~~f~ekN~ifie~a~ 77 (356)
T COG3424 2 AVIASVATALPP--YRYNQSEITDSFAELP--FQEGREDIPRVLHANAQINRRHLVLPLDWYREPHGFGEKNEIFIEEAV 77 (356)
T ss_pred ceeeecccCCCc--cccchHHHHHHHHHhc--cccchHHHHHHHhhccccccceecccHhhccCCCChhhhhhhHHHHHH
Confidence 379999999999 8999988887776533 2233445566666 5778888876665554332 234567899999
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCCceeeEecCCCcchHHHHHHHHHHHHhcCCC
Q 011007 164 LVIFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLLQVHPN 243 (496)
Q Consensus 164 ~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL~~~~~ 243 (496)
+++++|+++||+.+++.|+|||+|+++|+++..+||+.++|+++||+++++..+.+.||||.|+..|+..|+++++++|.
T Consensus 78 ~l~v~a~r~aL~~~~l~pedId~vv~vtsTG~~~Ps~dari~~~Lgl~p~~~Rvpv~glGCaaga~glara~~y~ra~P~ 157 (356)
T COG3424 78 PLGVDALRRALDGSPLRPEDIDAVVTVTSTGLATPSLDARIVGELGLSPDTRRVPVWGLGCAAGAAGLARARDYCRAAPD 157 (356)
T ss_pred HHHHHHHHHHhccCCCCHHHCcEEEEEeeccccCCChhHHHHhhcCCCCccceeeeecchhhhhhhHHHHHHHHHhhCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CEEEEEEECCCCCCCccCCC-ccccccccccccccEEEEEeccCC--cccccceeEeeEEEEEecCCcccccceeecccC
Q 011007 244 SNAVVVSTEIITPNYYQGNE-RAMLLPNCLFRMGGAAILLSNRRR--NRSRAKYRLVHVVRTHKGADDKAYRCVFEEEDK 320 (496)
Q Consensus 244 ~~aLVVs~E~~s~~~~~~~d-r~~l~~~~lfgDGAaA~lLs~~~~--~~~~~~~~L~~~~~t~~~~d~~~~~~~~~~~d~ 320 (496)
.+|||||.|.+|.++....+ ++.++...+||||+||++++.+.. +...-++.+.+..++ ...|+ -+.+-..-++
T Consensus 158 ~~vlvV~vELCSLt~~~~d~t~s~lVgtaLF~DG~AA~vv~gd~~~~~~~~~~p~i~~s~St-L~~ds--e~~Mgwdv~d 234 (356)
T COG3424 158 ANVLVVCVELCSLTYVFADDTKSNLVGTALFGDGAAAVVVSGDRRAEGKRPLRPDILDSFST-LYPDS--EDIMGWDVGD 234 (356)
T ss_pred ceEEEEEeeeeeeeeecCCCCcccceeeeeecCCeeEEEEeccccccccCCCCceecccccc-cCCcc--ccccceeecC
Confidence 99999999999987655444 347888999999999999998654 222223333332221 11221 1223233333
Q ss_pred CCceeeeechhHHHHHHHHhhhhhhhcCCCccchhHHHHHHHHHHHHhhhccccCCcccchhccccEEEeccCCHHHHHH
Q 011007 321 EGKVGISLSKDLMAIAGEALKSNITTIGPLVLPASEQLLFLMTLIGRKIFNPKWKPYIPDFKQAFEHFCIHAGGRAVIDE 400 (496)
Q Consensus 321 ~G~~g~~ls~d~~~v~g~~l~~~i~~~gp~vlp~~e~~~~~~~~~~~~v~~~~~~~~~p~~~~did~f~~H~~~~~v~~~ 400 (496)
+| ..+.+|+|+|.+....++.|+++ ++. ...+ ..+||++|+.|+||++|+++
T Consensus 235 ~G-~~~vlSrdlp~lIe~~l~~~V~~-----------------fL~----~~~l------s~~dI~~w~~HPGG~KVida 286 (356)
T COG3424 235 QG-LKVVLSRDLPNLIESYLAPNVTT-----------------FLA----THGL------SIEDIEAWVVHPGGPKVIDA 286 (356)
T ss_pred Cc-EEEEEcCchhHHHHHHhhhhHHH-----------------HHH----HcCC------chhhhceeeeCCCCchHHHH
Confidence 33 56789999999988777777653 111 1122 25899999999999999999
Q ss_pred HHHHcCCChhhHhhhhhhhcccCCccCCchHHHHHHHHHhCCCCCCCEEEEEeechhHhhhheeeEeec
Q 011007 401 LQKNLQLSAEHVEASRMTLHRFGNTSSSSLWYEMSYIEEKGRMKKGDRVWQIAFGSGFKCNSAVWKCNK 469 (496)
Q Consensus 401 i~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~i~~Gd~Vll~~fG~G~~~~sav~r~~~ 469 (496)
+++.||+++|+++.||+.|.+||||||+++++.|...++++ .++|.+.++++||+||+...++++|.+
T Consensus 287 ~~~sLgls~e~l~~s~~~L~~~GNMSSatvLfVL~d~l~~~-~~~g~~Gl~~A~GPGf~sElvL~~w~~ 354 (356)
T COG3424 287 YEESLGLSPEALELSWDVLREYGNMSSATVLFVLEDTLQKA-PKSGSRGLMFAMGPGFCSELVLLDWEG 354 (356)
T ss_pred HHHhcCCCHHHHHHHHHHHHHhCCccchhhHHHHHHHHHhc-CCCCcceeeeecCCcceeeeeeEEeec
Confidence 99999999999999999999999999999999999999987 699999999999999999999999975
No 17
>PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=1.1e-47 Score=396.98 Aligned_cols=330 Identities=17% Similarity=0.194 Sum_probs=244.4
Q ss_pred CCCceEEEEeeeecCCCCcccChHHHHHHHhhhhcCCcchHHHHHHHHHHcCCCceeecCCCCcCCCCCCchHHHHHhHH
Q 011007 84 KPRHVYLVDYACYKPPVTCRVPFATFMEHSRLILKNNPKSVEFQMRILERSGLGEETCLPPAIHYIPPTPTMEAARGEAE 163 (496)
Q Consensus 84 ~~~~v~Iv~~~~y~P~~~~~v~~~~~~e~~~~~~~~~~~~~~f~~~i~~~sGi~~r~~~~~~~~~~~~~~~~~~~~~ea~ 163 (496)
+-++++|++++.|+|+ ++++|+++.+.... ++. ...+++.+++||.+|+++.++++ +.
T Consensus 4 ~~~~~~I~~~g~~lP~--~~v~~~~~~~~~~~----~~~--~~~~~i~~~~Gi~~R~~~~~~e~--------------~~ 61 (353)
T PRK12880 4 RFDKAKISGICVSVPE--HKICIDDELESVFS----NDI--KTLKRMKKVIGLNTRYICDENTC--------------VS 61 (353)
T ss_pred cccccEEEEEEEECCC--eEecHHHHHHHhcC----cch--hhhhhhhhccCceEEEeCCCCCC--------------HH
Confidence 3467999999999999 89999976543221 111 12357888999999999886653 78
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEeecc-CCCCCCcHHHHHHHHcCCCCCceeeEecCCCcchHHHHHHHHHHHHhcCC
Q 011007 164 LVIFSAMDSLLQKTGLKPKDIDILIVNCS-LFSPTPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLLQVHP 242 (496)
Q Consensus 164 ~la~~Aa~~aL~~agi~p~dID~LI~~ss-~~~~~Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL~~~~ 242 (496)
+|+.+|+++||+++|++|+|||+||++|+ +++..|+++.+|+++||+++++.+||++ +||+|++.||++|++++++++
T Consensus 62 ~la~~Aa~~aL~~a~~~~~dId~lI~~t~t~d~~~P~~a~~v~~~Lg~~~~~~~~di~-~~C~g~~~aL~~A~~~i~~~~ 140 (353)
T PRK12880 62 DLGKHAANTLLQGLNIDKNSLDALIVVTQSPDFFMPSTACYLHQLLNLSSKTIAFDLG-QACAGYLYGLFVAHSLIQSGL 140 (353)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCCCCceEEehh-hhhHHHHHHHHHHHHHHHcCC
Confidence 99999999999999999999999999975 6899999999999999998889999998 699999999999999999998
Q ss_pred CCEEEEEEECCCCCCCccCCCccccccccccccccEEEEEeccCCcccccceeEeeEEEEEecCCcccccceeecccCCC
Q 011007 243 NSNAVVVSTEIITPNYYQGNERAMLLPNCLFRMGGAAILLSNRRRNRSRAKYRLVHVVRTHKGADDKAYRCVFEEEDKEG 322 (496)
Q Consensus 243 ~~~aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAaA~lLs~~~~~~~~~~~~L~~~~~t~~~~d~~~~~~~~~~~d~~G 322 (496)
.+ ||||++|.+|. +.++.|+. +..+|||||+|+||+++++.. . . ....+|++.++.+..+.++..
T Consensus 141 ~~-~LVv~~e~~S~-~~~~~d~~---~~~lFGDGAaA~vl~~~~~~~---~-----~--~~~~~~~~~~~~~~~p~g~~~ 205 (353)
T PRK12880 141 GK-ILLICGDTLSK-FIHPKNMN---LAPIFGDGVSATLIEKTDFNE---A-----F--FELGSDGKYFDKLIIPKGAMR 205 (353)
T ss_pred CC-EEEEEehhhhc-cCCcccCC---ceeeecccceEEEEEecCCCC---c-----e--EEEEecCCCCCeEEecCCCcC
Confidence 88 99999999997 44556654 467999999999999765421 1 1 134567777776665543210
Q ss_pred ceeeeec-hh-HHHHHHHHh-hhhhhhcCCCccchhHHHHHHHHH---HHHhhhccccCCcccchhccccEEEeccCCHH
Q 011007 323 KVGISLS-KD-LMAIAGEAL-KSNITTIGPLVLPASEQLLFLMTL---IGRKIFNPKWKPYIPDFKQAFEHFCIHAGGRA 396 (496)
Q Consensus 323 ~~g~~ls-~d-~~~v~g~~l-~~~i~~~gp~vlp~~e~~~~~~~~---~~~~v~~~~~~~~~p~~~~did~f~~H~~~~~ 396 (496)
..+.... .+ .+.. ++.. ...+...|+.+ +.+.... ..++++++. +.-.+|||+|++||+|++
T Consensus 206 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~v------~~~~~~~~~~~i~~~L~~~-----gl~~~did~~v~HQ~~~~ 273 (353)
T PRK12880 206 IPKADIFNDDSLMQT-EEFRQLENLYMDGANI------FNMALECEPKSFKEILEFS-----KVDEKDIAFHLFHQSNAY 273 (353)
T ss_pred CCccccccccccccc-cccccCceEEEcCHHH------HHHHHHHHHHHHHHHHHHc-----CCCHHHCCEEEECCCCHH
Confidence 0000000 00 0000 0000 00011112211 1111111 123344321 112489999999999999
Q ss_pred HHHHHHHHcCCChhhHhhhhhhhcccCCccCCchHHHHHHHHHhCCCCCCCEEEEEeechhHhhhheeeEeec
Q 011007 397 VIDELQKNLQLSAEHVEASRMTLHRFGNTSSSSLWYEMSYIEEKGRMKKGDRVWQIAFGSGFKCNSAVWKCNK 469 (496)
Q Consensus 397 v~~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~i~~Gd~Vll~~fG~G~~~~sav~r~~~ 469 (496)
+++.+.++||++++|+. ..++++||||||+|+|+.|++..++|+++ +++++||+|++|+++++|+.+
T Consensus 274 i~~~i~~~Lgl~~ek~~--~~~l~~~GNtssasip~~L~~~~~~~~~~----~ll~~~G~G~s~g~~ll~~~~ 340 (353)
T PRK12880 274 LVDCIKEELKLNDDKVP--NFIMEKYANLSACSLPALLCELDTPKEFK----ASLSAFGAGLSWGSAVLNFKD 340 (353)
T ss_pred HHHHHHHHhCCCHHHhh--hhhHHhhCCHHHHHHHHHHHHHHHcCCcE----EEEEEEchhhhheEeEEEECC
Confidence 99999999999999983 35689999999999999999999888764 999999999999999999954
No 18
>PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III
Probab=100.00 E-value=2.6e-47 Score=398.24 Aligned_cols=328 Identities=19% Similarity=0.259 Sum_probs=243.5
Q ss_pred CceEEEEeeeecCCCCcccChHHHHHHHhhhhcCCcchHHHHHHHHHHcCCCceeecCCCCcCCCCCCchHHHHHhHHHH
Q 011007 86 RHVYLVDYACYKPPVTCRVPFATFMEHSRLILKNNPKSVEFQMRILERSGLGEETCLPPAIHYIPPTPTMEAARGEAELV 165 (496)
Q Consensus 86 ~~v~Iv~~~~y~P~~~~~v~~~~~~e~~~~~~~~~~~~~~f~~~i~~~sGi~~r~~~~~~~~~~~~~~~~~~~~~ea~~l 165 (496)
.+++|+++|+|+|+ ++++|+++.+.++. ++ .+|.+++||++|+++.+++. +.+|
T Consensus 46 ~~~~I~g~g~~lP~--~~v~n~el~~~~~~----~~------~~i~~~tGi~~R~~~~~~~~--------------~~~L 99 (379)
T PLN02326 46 SGSKLVGCGSAVPK--LLITNDDLSKLVDT----SD------EWIATRTGIRNRRVLSGDET--------------LTSL 99 (379)
T ss_pred CCcEEEEEEEECCC--ceecHHHHHHhcCC----ch------hheecccCcceEeecCCCCC--------------HHHH
Confidence 46899999999999 89999999987652 23 36889999999999876653 6899
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCCceeeEecCCCcchHHHHHHHHHHHHhcCCCCE
Q 011007 166 IFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLLQVHPNSN 245 (496)
Q Consensus 166 a~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL~~~~~~~ 245 (496)
+.+|+++||+++|++|+|||.||++|+.....++.+..|+++||++ ++.+||++ +||+|++.||++|.+++++++.++
T Consensus 100 a~~Aa~~aL~~agi~~~dId~li~~s~~~~~~~~~a~~v~~~LG~~-~~~~~dv~-~~Ca~~~~aL~~A~~~l~~g~~~~ 177 (379)
T PLN02326 100 AVEAAKKALEMAGVDPEDVDLVLLCTSSPDDLFGSAPQVQAALGCT-NALAFDLT-AACSGFVLGLVTAARFIRGGGYKN 177 (379)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEeCCCCccCcHHHHHHHHhCCC-CCceeecc-ccchHHHHHHHHHHHHHHcCCCCE
Confidence 9999999999999999999999998764333456789999999998 89999999 699999999999999999999999
Q ss_pred EEEEEECCCCCCCccCCCccccccccccccccEEEEEeccCCcccccceeEeeEEEEEecCCcccccceeecccCCCce-
Q 011007 246 AVVVSTEIITPNYYQGNERAMLLPNCLFRMGGAAILLSNRRRNRSRAKYRLVHVVRTHKGADDKAYRCVFEEEDKEGKV- 324 (496)
Q Consensus 246 aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAaA~lLs~~~~~~~~~~~~L~~~~~t~~~~d~~~~~~~~~~~d~~G~~- 324 (496)
||||++|.+|. +.+++|+. +..+|||||+|+||++++... ..+ ..+...+++..++.+.....+....
T Consensus 178 vLVv~~e~~s~-~~~~~d~~---~~~lfGDGAaAvlL~~~~~~~----~~i---~~~~~~t~g~~~~~~~~~~~g~~~~~ 246 (379)
T PLN02326 178 VLVIGADALSR-YVDWTDRG---TCILFGDGAGAVVLQACDDDE----DGL---LGFDMHSDGNGHKHLHATFKGEDDDS 246 (379)
T ss_pred EEEEEechhcC-CCCccccC---ceEEEcceeEEEEEEEcCCCC----Cce---EEEEEEEcCCCCCeEEecCCCCcccc
Confidence 99999999987 45556665 356999999999999876431 112 2334455655554432221110000
Q ss_pred eeeechhHHHH-HHHHhhhhhhhcCCCccchhHHHHHHHHH---HHHhhhcc-ccCCcccchhccccEEEeccCCHHHHH
Q 011007 325 GISLSKDLMAI-AGEALKSNITTIGPLVLPASEQLLFLMTL---IGRKIFNP-KWKPYIPDFKQAFEHFCIHAGGRAVID 399 (496)
Q Consensus 325 g~~ls~d~~~v-~g~~l~~~i~~~gp~vlp~~e~~~~~~~~---~~~~v~~~-~~~~~~p~~~~did~f~~H~~~~~v~~ 399 (496)
...-..+.... ....-..++...|+.+ +.+.... ..+++++. .+. .+|||||++||+|+++++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~g~~v------~~~~~~~~~~~i~~~L~~~gl~------~~dId~~v~Hq~n~~~~~ 314 (379)
T PLN02326 247 SGGNTNGVGDFPPKKASYSCIQMNGKEV------FKFAVRCVPQVIESALQKAGLT------AESIDWLLLHQANQRIID 314 (379)
T ss_pred cccccccccccccccccccceEecCHHH------HHHHHHHHHHHHHHHHHHcCCC------HHHCCEEEECCCCHHHHH
Confidence 00000000000 0000001122222211 1111111 11233332 222 489999999999999999
Q ss_pred HHHHHcCCChhhHhhhhhhhcccCCccCCchHHHHHHHHHhCCCCCCCEEEEEeechhHhhhheeeEe
Q 011007 400 ELQKNLQLSAEHVEASRMTLHRFGNTSSSSLWYEMSYIEEKGRMKKGDRVWQIAFGSGFKCNSAVWKC 467 (496)
Q Consensus 400 ~i~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~i~~Gd~Vll~~fG~G~~~~sav~r~ 467 (496)
.+++.||++++|+ ..++++||||+|+|+|++|++++++|++++||+|++++||+||+|+++||+|
T Consensus 315 ~~~~~Lgl~~ek~---~~~l~~~GNt~sAsi~~~L~~~~~~g~~~~Gd~vll~~~G~G~t~~~~ll~~ 379 (379)
T PLN02326 315 AVAQRLGIPPEKV---ISNLANYGNTSAASIPLALDEAVRSGKVKKGDVIATAGFGAGLTWGSAIVRW 379 (379)
T ss_pred HHHHHcCCCHHHe---eecHhhcCcHHHHHHHHHHHHHHHcCCCCCCCEEEEEEEChhheeeEEEEEC
Confidence 9999999999998 5789999999999999999999999999999999999999999999999986
No 19
>PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=6e-46 Score=380.63 Aligned_cols=312 Identities=13% Similarity=0.220 Sum_probs=239.1
Q ss_pred CceEEEEeeeecCCCCcccChHHHHHHHhhhhcCCcchHHHHHHHHHHcCCCceeecCCCCcCCCCCCchHHHHHhHHHH
Q 011007 86 RHVYLVDYACYKPPVTCRVPFATFMEHSRLILKNNPKSVEFQMRILERSGLGEETCLPPAIHYIPPTPTMEAARGEAELV 165 (496)
Q Consensus 86 ~~v~Iv~~~~y~P~~~~~v~~~~~~e~~~~~~~~~~~~~~f~~~i~~~sGi~~r~~~~~~~~~~~~~~~~~~~~~ea~~l 165 (496)
+.++|.++++|+|+ ++++|+++.+..+. ++ +++.+++||++|+++. ++. +.+|
T Consensus 3 ~~~~I~~~g~~lP~--~~v~~~~~~~~~~~----~~------~~i~~~~Gi~~R~~~~-~~~--------------~~~l 55 (329)
T PRK07204 3 RYISIKGIGTYLPK--RKVDSLELDKKLDL----PE------GWVLKKSGVKTRHFVD-GET--------------SSYM 55 (329)
T ss_pred CCcEEEEEEEeCCC--ceecHHHHHHhhCC----CH------hHhhhccCceEEeecC-CCC--------------HHHH
Confidence 46899999999999 89999999887652 33 3688899999999987 442 6899
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEeecc-CCCCCCcHHHHHHHHcCCCC-CceeeEecCCCcchHHHHHHHHHHHHhcCCC
Q 011007 166 IFSAMDSLLQKTGLKPKDIDILIVNCS-LFSPTPSLSAMVINKYKLRS-NIKSFNLSGMGCSAGLISIDLARDLLQVHPN 243 (496)
Q Consensus 166 a~~Aa~~aL~~agi~p~dID~LI~~ss-~~~~~Ps~a~~I~~~Lgl~~-~~~~~dl~g~gCsg~l~al~lA~~lL~~~~~ 243 (496)
+.+|++++|+++|++|+|||+||++++ +++..|+.+..|+++||+++ ++.++|++ ++|+|++.||++|.+++++++.
T Consensus 56 a~~Aa~~aL~~ag~~~~dId~li~~~~~~~~~~p~~a~~v~~~lgl~~~~~~~~~v~-~~C~~~~~al~~a~~~l~~g~~ 134 (329)
T PRK07204 56 GAEAAKKAVEDAKLTLDDIDCIICASGTIQQAIPCTASLIQEQLGLQHSGIPCFDIN-STCLSFITALDTISYAIECGRY 134 (329)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCccHHHHHHHHhCCCCCCceEEEcc-chhHHHHHHHHHHHHHHHCCCC
Confidence 999999999999999999999999864 56778999999999999985 47999999 6999999999999999999999
Q ss_pred CEEEEEEECCCCCCCccCCCccccccccccccccEEEEEeccCCcccccceeEeeEEEEEecCCcccccceeecccC---
Q 011007 244 SNAVVVSTEIITPNYYQGNERAMLLPNCLFRMGGAAILLSNRRRNRSRAKYRLVHVVRTHKGADDKAYRCVFEEEDK--- 320 (496)
Q Consensus 244 ~~aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAaA~lLs~~~~~~~~~~~~L~~~~~t~~~~d~~~~~~~~~~~d~--- 320 (496)
++||||++|..+.. .+..++. +..+|||||+|+||++++.. .++ +.++..+++..++....+...
T Consensus 135 ~~~Lvv~~e~~s~~-~~~~~~~---~~~lfGDGAaA~ll~~~~~~-----~~i---l~~~~~t~~~~~~~~~~~~~~~~~ 202 (329)
T PRK07204 135 KRVLIISSEISSVG-LNWGQNE---SCILFGDGAAAVVITKGDHS-----SRI---LASHMETYSSGAHLSEIRGGGTMI 202 (329)
T ss_pred CEEEEEEeccccCC-CCcccCc---ceEEEecccEEEEEEEcCCC-----CcE---EEEEEEEecCCCCceEEecCCcCC
Confidence 99999999998863 3334433 45799999999999986642 223 233334444332211111100
Q ss_pred ---------CCceeeeec-hhHHHHHHHHhhhhhhhcCCCccchhHHHHHHHHHHHHhhhccccCCcccchhccccEEEe
Q 011007 321 ---------EGKVGISLS-KDLMAIAGEALKSNITTIGPLVLPASEQLLFLMTLIGRKIFNPKWKPYIPDFKQAFEHFCI 390 (496)
Q Consensus 321 ---------~G~~g~~ls-~d~~~v~g~~l~~~i~~~gp~vlp~~e~~~~~~~~~~~~v~~~~~~~~~p~~~~did~f~~ 390 (496)
++.+.+... ++++..+.+ .+....++++++ .+..++|||+|++
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~i~~~L~~-----~gl~~~did~~~~ 255 (329)
T PRK07204 203 HPREYSEERKEDFLFDMNGRAIFKLSSK----------------------YLMKFIDKLLMD-----AGYTLADIDLIVP 255 (329)
T ss_pred CCcccccccccCceEEECCHHHHHHHHH----------------------HHHHHHHHHHHH-----cCCCHHHCCEEEe
Confidence 000001110 111111000 011111333332 1222589999999
Q ss_pred ccCCHHHHHHHHHHcCCChhhHhhhhhhhcccCCccCCchHHHHHHHHHhCCCCCCCEEEEEeechhHhhhheeeEe
Q 011007 391 HAGGRAVIDELQKNLQLSAEHVEASRMTLHRFGNTSSSSLWYEMSYIEEKGRMKKGDRVWQIAFGSGFKCNSAVWKC 467 (496)
Q Consensus 391 H~~~~~v~~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~i~~Gd~Vll~~fG~G~~~~sav~r~ 467 (496)
||+|+.+++.+++.||++++++ ..++++||||+|+|++++|++++++|++++||+|++++||+|++|+++++|+
T Consensus 256 H~~~~~~~~~i~~~l~l~~e~~---~~~~~~~Gn~~sas~~~~L~~~~~~g~~~~Gd~vll~~~G~G~s~~~~ll~~ 329 (329)
T PRK07204 256 HQASGPAMRLIRKKLGVDEERF---VTIFEDHGNMIAASIPVALFEAIKQKKVQRGNKILLLGTSAGLSIGGILLEY 329 (329)
T ss_pred CCCCHHHHHHHHHHcCCCHHHh---hhhHhhhCcHHHHHHHHHHHHHHHcCCCCCCCEEEEEEEchhhhheeeEEeC
Confidence 9999999999999999999998 6899999999999999999999999999999999999999999999999985
No 20
>PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=7.9e-46 Score=378.64 Aligned_cols=317 Identities=19% Similarity=0.306 Sum_probs=245.3
Q ss_pred CceEEEEeeeecCCCCcccChHHHHHHHhhhhcCCcchHHHHHHHHHHcCCCceeecCCCCcCCCCCCchHHHHHhHHHH
Q 011007 86 RHVYLVDYACYKPPVTCRVPFATFMEHSRLILKNNPKSVEFQMRILERSGLGEETCLPPAIHYIPPTPTMEAARGEAELV 165 (496)
Q Consensus 86 ~~v~Iv~~~~y~P~~~~~v~~~~~~e~~~~~~~~~~~~~~f~~~i~~~sGi~~r~~~~~~~~~~~~~~~~~~~~~ea~~l 165 (496)
..++|.++++|+|+ ++++++++.+..+. +++ ++.+++||++|++.++++. +.+|
T Consensus 3 ~~~~I~~ig~~~P~--~~v~~~e~~~~~~~----~~~------~i~~~~Gi~~r~~~~~~~~--------------~~~l 56 (325)
T PRK12879 3 SYARITGIGTYVPP--RVLTNDDLETFIDT----SDE------WIVQRTGIKERRIAHVEEY--------------TSDL 56 (325)
T ss_pred CCCEEEEEEEECCC--cEEcHHHHHHhcCC----CHH------HhhhccCceEEEECCCCCC--------------HHHH
Confidence 46899999999999 89999999987552 332 5889999999999877653 6899
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEeecc-CCCCCCcHHHHHHHHcCCCCCceeeEecCCCcchHHHHHHHHHHHHhcCCCC
Q 011007 166 IFSAMDSLLQKTGLKPKDIDILIVNCS-LFSPTPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLLQVHPNS 244 (496)
Q Consensus 166 a~~Aa~~aL~~agi~p~dID~LI~~ss-~~~~~Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL~~~~~~ 244 (496)
+.+|++++|+++|++|+|||.||++++ +++..|+.+.+|+++||++ ++.+++++ +||+|++.||++|.++|++++.+
T Consensus 57 a~~A~~~al~~ag~~~~~Id~li~~~~~~~~~~~~~a~~l~~~lg~~-~~~~~~v~-~~C~~~~~al~~A~~~l~~g~~~ 134 (325)
T PRK12879 57 AIKAAERALARAGLDAEDIDLIIVATTTPDYLFPSTASQVQARLGIP-NAAAFDIN-AACAGFLYGLETANGLITSGLYK 134 (325)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCChHHHHHHHHhCCC-CCcEEEEC-ccchHHHHHHHHHHHHHHcCCCC
Confidence 999999999999999999999998865 5788999999999999997 68999999 69999999999999999999999
Q ss_pred EEEEEEECCCCCCCccCCCccccccccccccccEEEEEeccCCcccccceeEeeEEEEEecCCcccccceeecccCCCce
Q 011007 245 NAVVVSTEIITPNYYQGNERAMLLPNCLFRMGGAAILLSNRRRNRSRAKYRLVHVVRTHKGADDKAYRCVFEEEDKEGKV 324 (496)
Q Consensus 245 ~aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAaA~lLs~~~~~~~~~~~~L~~~~~t~~~~d~~~~~~~~~~~d~~G~~ 324 (496)
+||||++|.+|. +.+..++. ..++|||||+|+||++++... . +..+...++++.++.++.+...
T Consensus 135 ~~Lvv~~e~~s~-~~~~~~~~---~~~~~GDgAaA~ll~~~~~~~-----~---~~~~~~~~~~~~~~~~~~~~~~---- 198 (325)
T PRK12879 135 KVLVIGAERLSK-VTDYTDRT---TCILFGDGAGAVVLEATENEP-----G---FIDYVLGTDGDGGDILYRTGLG---- 198 (325)
T ss_pred EEEEEEehhhcC-cCCccccC---ceEEEeecceEEEEEecCCCC-----C---eEEEEEEEcCCCCCeEEEcCCC----
Confidence 999999999886 33444554 457999999999999876431 2 2334555666655554433211
Q ss_pred eeeechhHHHHHHHHhhhhhhhcCCCccchhHHHHHHH---HHHHHhhhcc-ccCCcccchhccccEEEeccCCHHHHHH
Q 011007 325 GISLSKDLMAIAGEALKSNITTIGPLVLPASEQLLFLM---TLIGRKIFNP-KWKPYIPDFKQAFEHFCIHAGGRAVIDE 400 (496)
Q Consensus 325 g~~ls~d~~~v~g~~l~~~i~~~gp~vlp~~e~~~~~~---~~~~~~v~~~-~~~~~~p~~~~did~f~~H~~~~~v~~~ 400 (496)
.....+.. .....+...|. +.+.+.. ....++++++ .+. ++|||+|++||+|+++++.
T Consensus 199 -~~~~~~~~-----~~~~~~~~~~~------~~~~~~~~~~~~~i~~~L~~~g~~------~~did~~~~h~~~~~~~~~ 260 (325)
T PRK12879 199 -TTMDRDAL-----SGDGYIVQNGR------EVFKWAVRTMPKGARQVLEKAGLT------KDDIDWVIPHQANLRIIES 260 (325)
T ss_pred -CCCCcccc-----ccCccEEEcCH------HHHHHHHHHHHHHHHHHHHHcCCC------HHHCCEEEECCCCHHHHHH
Confidence 00000000 00000111110 0001111 1112344432 222 4899999999999999999
Q ss_pred HHHHcCCChhhHhhhhhhhcccCCccCCchHHHHHHHHHhCCCCCCCEEEEEeechhHhhhheeeEe
Q 011007 401 LQKNLQLSAEHVEASRMTLHRFGNTSSSSLWYEMSYIEEKGRMKKGDRVWQIAFGSGFKCNSAVWKC 467 (496)
Q Consensus 401 i~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~i~~Gd~Vll~~fG~G~~~~sav~r~ 467 (496)
+++.||++++++ ..++++||||+|+|++++|++++++|++++||+|++++||+|++|+++|+||
T Consensus 261 ~~~~lg~~~~~~---~~~~~~~Gn~~sas~~~~L~~~~~~g~~~~Gd~vll~~~G~G~~~~~~l~~~ 324 (325)
T PRK12879 261 LCEKLGIPMEKT---LVSVEYYGNTSAATIPLALDLALEQGKIKPGDTLLLYGFGAGLTWAALLVKW 324 (325)
T ss_pred HHHHcCCCHHHh---hhhHhhhCchHHHHHHHHHHHHHHcCCCCCCCEEEEEEEchhhhhEEEEEEe
Confidence 999999999998 4589999999999999999999999999999999999999999999999998
No 21
>CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional
Probab=100.00 E-value=3.1e-46 Score=382.57 Aligned_cols=322 Identities=17% Similarity=0.265 Sum_probs=240.2
Q ss_pred ceEEEEeeeecCCCCcccChHHHHHHHhhhhcCCcchHHHHHHHHHHcCCCceeecCCCCcCCCCCCchHHHHHhHHHHH
Q 011007 87 HVYLVDYACYKPPVTCRVPFATFMEHSRLILKNNPKSVEFQMRILERSGLGEETCLPPAIHYIPPTPTMEAARGEAELVI 166 (496)
Q Consensus 87 ~v~Iv~~~~y~P~~~~~v~~~~~~e~~~~~~~~~~~~~~f~~~i~~~sGi~~r~~~~~~~~~~~~~~~~~~~~~ea~~la 166 (496)
.++|++++.|+|+ ++|+|+|+++.++. ++ .+|.+++||++|++..+++. +.+|+
T Consensus 2 ~v~I~~~g~~lP~--~~v~~~e~~~~~~~----~~------~~i~~~~gi~~r~~~~~~~~--------------~~~la 55 (326)
T CHL00203 2 GVHILSTGSSVPN--FSVENQQFEDIIET----SD------HWISTRTGIKKRHLAPSSTS--------------LTKLA 55 (326)
T ss_pred ccEEEEEEEECCC--eEEcHHHHHHhcCC----Ch------hhEeeccCeEEEEeCCCCCC--------------HHHHH
Confidence 4799999999999 89999999988652 22 26789999999998877653 68999
Q ss_pred HHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCCceeeEecCCCcchHHHHHHHHHHHHhcCCCCEE
Q 011007 167 FSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLLQVHPNSNA 246 (496)
Q Consensus 167 ~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL~~~~~~~a 246 (496)
.+|++++|+++|++|+|||.||++|+.....+..+..++++||++ ++.+++++ ++|++++.||++|.++++++..+++
T Consensus 56 ~~A~~~aL~~ag~~~~dId~vi~~s~~~~~~~~~~~~v~~~Lg~~-~~~~~~v~-~~Casg~~al~~A~~~i~sg~~~~~ 133 (326)
T CHL00203 56 AEAANKALDKAHMDPLEIDLIILATSTPDDLFGSASQLQAEIGAT-RAVAFDIT-AACSGFILALVTATQFIQNGSYKNI 133 (326)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCchHHHHHHHhCCC-CCceeeec-ccchhHHHHHHHHHHHHHcCCCCEE
Confidence 999999999999999999999998754322334578899999998 68899999 6999999999999999999999999
Q ss_pred EEEEECCCCCCCccCCCccccccccccccccEEEEEeccCCcccccceeEeeEEEEEecCCcccccceeecccC-CC-ce
Q 011007 247 VVVSTEIITPNYYQGNERAMLLPNCLFRMGGAAILLSNRRRNRSRAKYRLVHVVRTHKGADDKAYRCVFEEEDK-EG-KV 324 (496)
Q Consensus 247 LVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAaA~lLs~~~~~~~~~~~~L~~~~~t~~~~d~~~~~~~~~~~d~-~G-~~ 324 (496)
|||++|.+|. +.+++++. +..+|||||+|+||++.+.. .+. .....+|++.++.+...... ++ ..
T Consensus 134 Lvv~~e~~s~-~~~~~~~~---~~~~fgDga~A~ll~~~~~~------~~~---~~~~~t~g~~~~~~~~~~~~~~~~~~ 200 (326)
T CHL00203 134 LVVGADTLSK-WIDWSDRK---TCILFGDGAGAAIIGASYEN------SIL---GFKLCTDGKLNSHLQLMNKPVNNQSF 200 (326)
T ss_pred EEEEehhhhC-cCCcccCC---ceEEEcceeeEEEEEEcCCC------CeE---EEEEEEcCCCcceEEecCCCCCcccc
Confidence 9999999997 44555654 46899999999999986542 122 23344566555433221100 00 00
Q ss_pred eeeechhHHHHHHHHhhhhhhhcCCCccchhHHHHHHHHHHHHhhhccccCCcccchhccccEEEeccCCHHHHHHHHHH
Q 011007 325 GISLSKDLMAIAGEALKSNITTIGPLVLPASEQLLFLMTLIGRKIFNPKWKPYIPDFKQAFEHFCIHAGGRAVIDELQKN 404 (496)
Q Consensus 325 g~~ls~d~~~v~g~~l~~~i~~~gp~vlp~~e~~~~~~~~~~~~v~~~~~~~~~p~~~~did~f~~H~~~~~v~~~i~~~ 404 (496)
+... .+. + . ...+...|+.++ ...+..... ..++++++ .+.-.+|||||++||+|+++++.+++.
T Consensus 201 ~~~~---~~~--~-~-~~~~~~~g~~~~--~~~~~~~~~-~i~~~L~~-----~g~~~~did~~~~hq~~~~~~~~~~~~ 265 (326)
T CHL00203 201 GTTK---LPQ--G-Q-YQSISMNGKEVY--KFAVFQVPA-VIIKCLNA-----LNISIDEVDWFILHQANKRILEAIANR 265 (326)
T ss_pred cccc---ccc--C-C-cceEEECCHHHH--HHHHHHHHH-HHHHHHHH-----cCCCHHHCCEEEECCCCHHHHHHHHHH
Confidence 0000 000 0 0 001111121110 000000111 11333332 122258999999999999999999999
Q ss_pred cCCChhhHhhhhhhhcccCCccCCchHHHHHHHHHhCCCCCCCEEEEEeechhHhhhheeeEe
Q 011007 405 LQLSAEHVEASRMTLHRFGNTSSSSLWYEMSYIEEKGRMKKGDRVWQIAFGSGFKCNSAVWKC 467 (496)
Q Consensus 405 Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~i~~Gd~Vll~~fG~G~~~~sav~r~ 467 (496)
||++++|+ ..++++||||+|||+|++|++++++|++++||+|++++||+|++|+++|+||
T Consensus 266 lgl~~~k~---~~~l~~~Gn~~sasi~~~L~~~~~~g~~~~Gd~vll~~~G~G~s~~~~v~~~ 325 (326)
T CHL00203 266 LSVPNSKM---ITNLEKYGNTSAASIPLALDEAIQNNKIQPGQIIVLSGFGAGLTWGAIVLKW 325 (326)
T ss_pred hCCCHHHh---hhHHHhhCcHHHHHHHHHHHHHHHhCCCCCCCEEEEEEEchhhhheEEEEEe
Confidence 99999999 5799999999999999999999999999999999999999999999999997
No 22
>PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=3.6e-45 Score=376.07 Aligned_cols=320 Identities=20% Similarity=0.238 Sum_probs=241.6
Q ss_pred CceEEEEeeeecCCCCcccChHHHHHHHhhhh-cCCcchHHHHHHHHHHcCCCceeecCCCCcCCCCCCchHHHHHhHHH
Q 011007 86 RHVYLVDYACYKPPVTCRVPFATFMEHSRLIL-KNNPKSVEFQMRILERSGLGEETCLPPAIHYIPPTPTMEAARGEAEL 164 (496)
Q Consensus 86 ~~v~Iv~~~~y~P~~~~~v~~~~~~e~~~~~~-~~~~~~~~f~~~i~~~sGi~~r~~~~~~~~~~~~~~~~~~~~~ea~~ 164 (496)
++++|.++++|+|+ ++++|+++.+.+.... .+.... +++.+++||++|++.++++. +.+
T Consensus 4 ~~v~I~~~g~~lP~--~~v~~~~~~~~~~~~~~~~~~~~----~~i~~~~Gi~~R~~~~~~~~--------------~~~ 63 (338)
T PRK09258 4 SNVAILSLAYELAP--VVVTSSEIEERLAPLYERLRLPP----GQLEALTGIRERRWWPEGTQ--------------LSD 63 (338)
T ss_pred cceEEEEEEecCCC--ccCcHHHHHHHhhhcccccCCCh----hHhhhhcCceeEecCCCCCC--------------HHH
Confidence 57999999999999 8999999998754311 011111 35778899999999766542 689
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEeecc-CCCCCCcHHHHHHHHcCCCCCceeeEecCCCcchHHHHHHHHHHHHhcCCC
Q 011007 165 VIFSAMDSLLQKTGLKPKDIDILIVNCS-LFSPTPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLLQVHPN 243 (496)
Q Consensus 165 la~~Aa~~aL~~agi~p~dID~LI~~ss-~~~~~Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL~~~~~ 243 (496)
|+.+|++++|+++|++++|||.||++|+ +++..|+++.+|+++||+++++.++|++ .||+|++.||++|.+++++++.
T Consensus 64 la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~~p~~a~~v~~~lgl~~~~~~~~v~-~~C~~~~~al~~A~~~i~~g~~ 142 (338)
T PRK09258 64 GAIAAGRKALAEAGIDPSDIGLLINTSVCRDYLEPATACRVHHNLGLPKSCANFDVS-NACLGFLNGMLDAANMIELGQI 142 (338)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCChHHHHHHHHcCCCCCCceeehh-hhhHHHHHHHHHHHHHHHcCCC
Confidence 9999999999999999999999998874 6888999999999999998779999999 5999999999999999999999
Q ss_pred CEEEEEEECCCCCCCccCC------Ccc------ccccccccccccEEEEEeccCCcccccceeEeeEEEEEecCCcccc
Q 011007 244 SNAVVVSTEIITPNYYQGN------ERA------MLLPNCLFRMGGAAILLSNRRRNRSRAKYRLVHVVRTHKGADDKAY 311 (496)
Q Consensus 244 ~~aLVVs~E~~s~~~~~~~------dr~------~l~~~~lfgDGAaA~lLs~~~~~~~~~~~~L~~~~~t~~~~d~~~~ 311 (496)
++||||++|..+.. ++.. +.. ..+...+|||||+|+||++++.... .+++.. ....++++.+
T Consensus 143 ~~~Lvv~~e~~s~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~GDGA~A~ll~~~~~~~~--~~~~~~---~~~~~~~~~~ 216 (338)
T PRK09258 143 DYALVVSGESAREI-VEATIDRLLAPETTREDFAQSFATLTLGSGAAAAVLTRGSLHPR--GHRLLG---GVTRAATEHH 216 (338)
T ss_pred CEEEEEEecccchh-ccchhhhhccCccchhhhhhccceEEecccceEEEEecCCCCCC--cceeee---eeeecCCCcc
Confidence 99999999998863 2211 111 1123578999999999998754211 234332 2333444433
Q ss_pred cceeecccCCCceeeeechhHHHHHHHHhhhhhhhcCCCccchhHHHHHHHHHHHHhhhcc-ccCCcccchhccccEEEe
Q 011007 312 RCVFEEEDKEGKVGISLSKDLMAIAGEALKSNITTIGPLVLPASEQLLFLMTLIGRKIFNP-KWKPYIPDFKQAFEHFCI 390 (496)
Q Consensus 312 ~~~~~~~d~~G~~g~~ls~d~~~v~g~~l~~~i~~~gp~vlp~~e~~~~~~~~~~~~v~~~-~~~~~~p~~~~did~f~~ 390 (496)
+.+. . + ...+..+.+.+....++ .... ..+++++. .++ .+|||+|++
T Consensus 217 ~~~~-~-~-----~~~~~~~~~~~~~~~~~------------------~~~~-~~~~~L~~~g~~------~~did~~i~ 264 (338)
T PRK09258 217 ELCQ-G-G-----RDGMRTDAVGLLKEGVE------------------LAVD-TWEAFLAQLGWA------VEQVDRVIC 264 (338)
T ss_pred cccc-c-C-----ccceEEcHHHHHHHHHH------------------HHHH-HHHHHHHHcCCC------HHHCCEEec
Confidence 3111 0 0 01122233322211100 0000 11233332 222 489999999
Q ss_pred ccCCHHHHHHHHHHcCCChhhHhhhhhhhcccCCccCCchHHHHHHHHHhCCCCCCCEEEEEeechhHhhhheeeEe
Q 011007 391 HAGGRAVIDELQKNLQLSAEHVEASRMTLHRFGNTSSSSLWYEMSYIEEKGRMKKGDRVWQIAFGSGFKCNSAVWKC 467 (496)
Q Consensus 391 H~~~~~v~~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~i~~Gd~Vll~~fG~G~~~~sav~r~ 467 (496)
||+|+++++.+++.||++++|+ ..++++||||+|+|++++|++++++|++++||+|++++||+|++|+++++||
T Consensus 265 H~~~~~~~~~~~~~lgl~~~k~---~~~~~~~GN~~sas~~~~L~~~~~~g~~~~Gd~vll~~~G~G~s~~~~~~~~ 338 (338)
T PRK09258 265 HQVGAAHTRAILKALGIDPEKV---FTTFPTLGNMGPASLPITLAMAAEEGFLKPGDRVALLGIGSGLNCSMLEVKW 338 (338)
T ss_pred CCCCHHHHHHHHHHhCCCHHHc---eehHhhhCCcHHhHHHHHHHHHHHhCCCCCCCEEEEEEechhHhhHhHeeeC
Confidence 9999999999999999999999 5788999999999999999999999999999999999999999999999986
No 23
>cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems. It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA.
Probab=100.00 E-value=2.2e-44 Score=366.66 Aligned_cols=319 Identities=22% Similarity=0.310 Sum_probs=243.2
Q ss_pred ceEEEEeeeecCCCCcccChHHHHHHHhhhhcCCcchHHHHHHHHHHcCCCceeecCCCCcCCCCCCchHHHHHhHHHHH
Q 011007 87 HVYLVDYACYKPPVTCRVPFATFMEHSRLILKNNPKSVEFQMRILERSGLGEETCLPPAIHYIPPTPTMEAARGEAELVI 166 (496)
Q Consensus 87 ~v~Iv~~~~y~P~~~~~v~~~~~~e~~~~~~~~~~~~~~f~~~i~~~sGi~~r~~~~~~~~~~~~~~~~~~~~~ea~~la 166 (496)
+++|.++++|+|+ ++++++++.+..+. ++ +++.+++|+++|+++++++. +.+|+
T Consensus 1 ~~~I~~i~~~lP~--~~~~~~~~~~~~~~----~~------~~~~~~~Gi~~r~~~~~~~~--------------~~~la 54 (320)
T cd00830 1 NARILGIGSYLPE--RVVTNDELEKRLDT----SD------EWIRTRTGIRERRIADPGET--------------TSDLA 54 (320)
T ss_pred CCEEEEEEEECCC--cEEcHHHHHHHcCC----CH------HHhhhccCceEEeeCCCCCC--------------HHHHH
Confidence 4799999999999 89999999998742 32 36788999999999987653 68999
Q ss_pred HHHHHHHHHHcCCCcCCcCEEEeecc-CCCCCCcHHHHHHHHcCCCCCceeeEecCCCcchHHHHHHHHHHHHhcCCCCE
Q 011007 167 FSAMDSLLQKTGLKPKDIDILIVNCS-LFSPTPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLLQVHPNSN 245 (496)
Q Consensus 167 ~~Aa~~aL~~agi~p~dID~LI~~ss-~~~~~Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL~~~~~~~ 245 (496)
.+|++++|+++|++++|||.||++++ +++..|+.+.+|+++||++ ++.+++++ +||++++.||++|.+++++++.++
T Consensus 55 ~~A~~~al~~ag~~~~~Id~li~~~~~~~~~~~~~~~~l~~~lg~~-~~~~~~v~-~~C~s~~~al~~A~~~i~~g~~~~ 132 (320)
T cd00830 55 VEAAKKALEDAGIDADDIDLIIVATSTPDYLFPATACLVQARLGAK-NAAAFDIN-AACSGFLYGLSTAAGLIRSGGAKN 132 (320)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCC-CCcEeecc-ccchHHHHHHHHHHHHHHcCCCCE
Confidence 99999999999999999999998865 5677899999999999998 79999999 699999999999999999999999
Q ss_pred EEEEEECCCCCCCccCCCccccccccccccccEEEEEeccCCcccccceeEeeEEEEEecCCcccccceeecccCCCcee
Q 011007 246 AVVVSTEIITPNYYQGNERAMLLPNCLFRMGGAAILLSNRRRNRSRAKYRLVHVVRTHKGADDKAYRCVFEEEDKEGKVG 325 (496)
Q Consensus 246 aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAaA~lLs~~~~~~~~~~~~L~~~~~t~~~~d~~~~~~~~~~~d~~G~~g 325 (496)
||||++|.++.. .+.+++. ...+|||||+|+||++++.. +++ ..++..++++.++.+..+..+..
T Consensus 133 vLvv~~e~~s~~-~~~~~~~---~~~~~GDgAaA~ll~~~~~~-----~~i---~~~~~~~~~~~~~~~~~~~~~~~--- 197 (320)
T cd00830 133 VLVVGAETLSRI-LDWTDRS---TAVLFGDGAGAVVLEATEED-----PGI---LDSVLGSDGSGADLLTIPAGGSR--- 197 (320)
T ss_pred EEEEEehhhccc-cCcccCC---ceEEEeccceEEEEEecCCC-----CcE---EEEEEEEcCCCCCeEEeCCCCcC---
Confidence 999999998863 3334443 46899999999999987642 233 33455566666665554422110
Q ss_pred eeechhHHHHHHHHhhhhhhhcCCCccchhHHHHHHHHHHHHhhhccccCCcccchhccccEEEeccCCHHHHHHHHHHc
Q 011007 326 ISLSKDLMAIAGEALKSNITTIGPLVLPASEQLLFLMTLIGRKIFNPKWKPYIPDFKQAFEHFCIHAGGRAVIDELQKNL 405 (496)
Q Consensus 326 ~~ls~d~~~v~g~~l~~~i~~~gp~vlp~~e~~~~~~~~~~~~v~~~~~~~~~p~~~~did~f~~H~~~~~v~~~i~~~L 405 (496)
.+. +.. ..-..++...++.+. +.....+....++++++ .+.-++|||+|++||+|+++++.+++.|
T Consensus 198 ~~~--~~~----~~~~~~~~~~~~~~~---~~~~~~~~~~i~~~l~~-----~g~~~~di~~~~~h~~~~~~~~~~~~~l 263 (320)
T cd00830 198 SPF--EDA----EGGDPYLVMDGREVF---KFAVRLMPESIEEALEK-----AGLTPDDIDWFVPHQANLRIIEAVAKRL 263 (320)
T ss_pred Ccc--ccc----cccCccEEEcChHHH---HHHHHhhHHHHHHHHHH-----cCCCHHHCCEEEECCCCHHHHHHHHHHh
Confidence 000 000 000000111111100 00000000111233332 1122489999999999999999999999
Q ss_pred CCChhhHhhhhhhhcccCCccCCchHHHHHHHHHhCCCCCCCEEEEEeechhHhhhheee
Q 011007 406 QLSAEHVEASRMTLHRFGNTSSSSLWYEMSYIEEKGRMKKGDRVWQIAFGSGFKCNSAVW 465 (496)
Q Consensus 406 gl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~i~~Gd~Vll~~fG~G~~~~sav~ 465 (496)
|++++++ ..++++|||++|+|++++|++++++|++++||+|+++++|+|++|+++++
T Consensus 264 gl~~~~~---~~~~~~~Gn~~sas~~~~L~~~~~~~~~~~G~~vll~~~G~G~~~~~~l~ 320 (320)
T cd00830 264 GLPEEKV---VVNLDRYGNTSAASIPLALDEAIEEGKLKKGDLVLLLGFGAGLTWGAALL 320 (320)
T ss_pred CCCHHHh---hhhHHhhCcHHHHHHHHHHHHHHHcCCCCCCCEEEEEEEchHHhhHHhhC
Confidence 9999998 57999999999999999999999999999999999999999999999875
No 24
>PRK06840 hypothetical protein; Validated
Probab=100.00 E-value=3.6e-44 Score=369.04 Aligned_cols=327 Identities=19% Similarity=0.225 Sum_probs=242.4
Q ss_pred CCceEEEEeeeecCCCCcccChHHHHHHHhhhhcCCcchHHHHHHHHHHcCCCceeecCCCCcCCCCCCchHHHHHhHHH
Q 011007 85 PRHVYLVDYACYKPPVTCRVPFATFMEHSRLILKNNPKSVEFQMRILERSGLGEETCLPPAIHYIPPTPTMEAARGEAEL 164 (496)
Q Consensus 85 ~~~v~Iv~~~~y~P~~~~~v~~~~~~e~~~~~~~~~~~~~~f~~~i~~~sGi~~r~~~~~~~~~~~~~~~~~~~~~ea~~ 164 (496)
|++++|.+++.|+|+ ++++++++.+..+. +++ ++.+++||.+|+++++++. +.+
T Consensus 2 ~~~v~I~~~~~~lP~--~~v~~~~l~~~~g~----~~~------~~~~~~Gi~~r~~~~~~~~--------------~~~ 55 (339)
T PRK06840 2 EMNVGIVGTGVYLPK--DVMTAEEIAEKTGI----PEE------VVIEKFGIYEKPVPGPEDH--------------TSD 55 (339)
T ss_pred CCceEEEEEEEeCCC--cccCHHHHHHHhCC----CHH------HHhhhcCcceEeeCCCCCC--------------HHH
Confidence 468999999999999 89999999887652 332 5778999999999877653 689
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEeecc--CCCCCCcHHHHHHHHcCCCCCceeeEecCCCcchHHHHHHHHHHHHhc-C
Q 011007 165 VIFSAMDSLLQKTGLKPKDIDILIVNCS--LFSPTPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLLQV-H 241 (496)
Q Consensus 165 la~~Aa~~aL~~agi~p~dID~LI~~ss--~~~~~Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL~~-~ 241 (496)
|+.+|++++|+++|++|+|||.||++++ +++..|+.+.+|++++|++ ++.+++++ +||++++.||++|.+++++ +
T Consensus 56 la~~Aa~~aL~~ag~~~~dId~li~~~~~~~~~~~p~~a~~l~~~lGl~-~~~~~~v~-~~C~~~~~al~~A~~~l~~~g 133 (339)
T PRK06840 56 MAIAAAKPALKQAGVDPAAIDVVIYIGSEHKDYPVWSSAPKIQHEIGAK-NAWAFDIM-AVCASFPIALKVAKDLLYSDP 133 (339)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEeccCCCCCCCCchHHHHHHHhCCC-Cccccccc-ccchHHHHHHHHHHHHHhcCC
Confidence 9999999999999999999999997643 4778999999999999997 78999999 6999999999999999999 6
Q ss_pred CCCEEEEEEECCCCCCCccCCCccccccccccccccEEEEEeccCCcccccceeEeeEEEEEecCCcccccceeecccCC
Q 011007 242 PNSNAVVVSTEIITPNYYQGNERAMLLPNCLFRMGGAAILLSNRRRNRSRAKYRLVHVVRTHKGADDKAYRCVFEEEDKE 321 (496)
Q Consensus 242 ~~~~aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAaA~lLs~~~~~~~~~~~~L~~~~~t~~~~d~~~~~~~~~~~d~~ 321 (496)
..+++|||++|..+.. .+..++..- ....|||||+|+||++.+.. +++ +.+...+|++.++.+..+.++
T Consensus 134 ~~~~~Lvv~~~~~s~~-~~~~~~~~~-~~~~~GDgAaA~ll~~~~~~-----~~i---l~~~~~t~~~~~~~~~~~~~g- 202 (339)
T PRK06840 134 SIENVLLVGGYRNSDL-VDYDNPRTR-FMFNFAAGGSAALLKKDAGK-----NRI---LGSAIITDGSFSEDVRVPAGG- 202 (339)
T ss_pred CccEEEEEeecccccc-cCcCCCCee-eeccCCCceeEEEEEecCCC-----Cce---EEEEEEEcCCccceEEecCCC-
Confidence 6789999999998863 333333310 01248999999999986542 233 344556677666655433221
Q ss_pred CceeeeechhHHHHHHHHhhhhhhhcCCCccchhHHHH----HHHHHHHHhhhcc-ccCCcccchhccccEEEeccCCHH
Q 011007 322 GKVGISLSKDLMAIAGEALKSNITTIGPLVLPASEQLL----FLMTLIGRKIFNP-KWKPYIPDFKQAFEHFCIHAGGRA 396 (496)
Q Consensus 322 G~~g~~ls~d~~~v~g~~l~~~i~~~gp~vlp~~e~~~----~~~~~~~~~v~~~-~~~~~~p~~~~did~f~~H~~~~~ 396 (496)
...+.+.+.... + +..+...+|..+ ...+. ..+....++++++ .+. .+|||+|++||+|++
T Consensus 203 --~~~~~~~~~~~~-~---~~~~~~~~~~~~--~~~~~~~~~~~~~~~i~~~L~~~gl~------~~did~~~~h~~~~~ 268 (339)
T PRK06840 203 --TKQPASPETVEN-R---QHYLDVIDPESM--KERLDEVSIPNFLKVIREALRKSGYT------PKDIDYLAILHMKRS 268 (339)
T ss_pred --cCCCCccccccc-c---cceEEEcCcHHH--HHHhHhhHHHHHHHHHHHHHHHcCCC------HHHCCEEEECCcCHH
Confidence 111111100000 0 000000111100 00000 0011111333332 222 489999999999999
Q ss_pred HHHHHHHHcCCChhhHhhhhhhhcccCCccCCchHHHHHHHHHhCCCCCCCEEEEEeechhHhhhheeeEee
Q 011007 397 VIDELQKNLQLSAEHVEASRMTLHRFGNTSSSSLWYEMSYIEEKGRMKKGDRVWQIAFGSGFKCNSAVWKCN 468 (496)
Q Consensus 397 v~~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~i~~Gd~Vll~~fG~G~~~~sav~r~~ 468 (496)
+++.+++.||++++++ . ++.+||||+|+|++++|++++++|++++||++++++||+|++|+++++||.
T Consensus 269 ~~~~~~~~Lgl~~~~~---~-~~~~~Gn~~sas~~~~L~~~~~~~~~~~Gd~ill~~~G~G~s~~~~~l~~~ 336 (339)
T PRK06840 269 AHIALLEGLGLTEEQA---I-YLDEYGHLGQLDQILSLHLALEQGKLKDGDLVVLVSAGTGYTWAATVIRWG 336 (339)
T ss_pred HHHHHHHHcCCCHHHe---E-eHHhccchhhhhHHHHHHHHHHcCCCCCCCEEEEEEEehhhheeEEEEEec
Confidence 9999999999999997 2 689999999999999999999999999999999999999999999999984
No 25
>TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III. Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment.
Probab=100.00 E-value=3.4e-44 Score=365.65 Aligned_cols=310 Identities=21% Similarity=0.338 Sum_probs=245.2
Q ss_pred ceEEEEeeeecCCCCcccChHHHHHHHhhhhcCCcchHHHHHHHHHHcCCCceeecCCCCcCCCCCCchHHHHHhHHHHH
Q 011007 87 HVYLVDYACYKPPVTCRVPFATFMEHSRLILKNNPKSVEFQMRILERSGLGEETCLPPAIHYIPPTPTMEAARGEAELVI 166 (496)
Q Consensus 87 ~v~Iv~~~~y~P~~~~~v~~~~~~e~~~~~~~~~~~~~~f~~~i~~~sGi~~r~~~~~~~~~~~~~~~~~~~~~ea~~la 166 (496)
.++|.++++|+|+ ++++++++.+..+. ++ .++.+++|+++|++..+++. +.+|+
T Consensus 2 ~~~I~~i~~~~P~--~~~~~~~~~~~~~~----~~------~~i~~~~gi~~r~~~~~~~~--------------~~~la 55 (318)
T TIGR00747 2 YAGILGTGSYLPE--KVLTNADLEKMVDT----SD------EWIVTRTGIKERRIAADDET--------------SSTMG 55 (318)
T ss_pred CCEEEEEEEECCC--ceecHHHHHHhcCC----ch------HHeecccCceEEEECCCCCC--------------HHHHH
Confidence 4899999999999 89999999987653 22 25888999999999877654 68999
Q ss_pred HHHHHHHHHHcCCCcCCcCEEEeecc-CCCCCCcHHHHHHHHcCCCCCceeeEecCCCcchHHHHHHHHHHHHhcCCCCE
Q 011007 167 FSAMDSLLQKTGLKPKDIDILIVNCS-LFSPTPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLLQVHPNSN 245 (496)
Q Consensus 167 ~~Aa~~aL~~agi~p~dID~LI~~ss-~~~~~Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL~~~~~~~ 245 (496)
.+|++++|+++|++|+|||.+|++++ +++..|+.+.+++++||++ ++.+++++ +||++++.||++|.++++++..++
T Consensus 56 ~~A~~~al~~agl~~~~Id~~i~~~~~~~~~~~~~a~~l~~~lGl~-~~~~~~v~-~~C~s~~~al~~A~~~i~~g~~~~ 133 (318)
T TIGR00747 56 FEAAKRAIENAGISKDDIDLIIVATTTPDHAFPSAACMVQAYLGIK-GIPAFDLS-AACAGFIYALSVAKQYIESGKYKT 133 (318)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCChHHHHHHHHhCCC-CCcEeehh-hhhHHHHHHHHHHHHHHHcCCCCE
Confidence 99999999999999999999998865 5778899999999999998 68999998 699999999999999999999999
Q ss_pred EEEEEECCCCCCCccCCCccccccccccccccEEEEEeccCCcccccceeEeeEEEEEecCCcccccceeecccCCC---
Q 011007 246 AVVVSTEIITPNYYQGNERAMLLPNCLFRMGGAAILLSNRRRNRSRAKYRLVHVVRTHKGADDKAYRCVFEEEDKEG--- 322 (496)
Q Consensus 246 aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAaA~lLs~~~~~~~~~~~~L~~~~~t~~~~d~~~~~~~~~~~d~~G--- 322 (496)
+|||++|..+. +.++.++. ...+|||||+|+||++++... + +..++..++++.++.++.+.+...
T Consensus 134 ~Lvv~~e~~~~-~~~~~~~~---~~~~~GDGAaA~lL~~~~~~~-----~---i~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (318)
T TIGR00747 134 VLVVGAEKLSS-TLDWTDRG---TCVLFGDGAGAVVLGESEDPG-----G---IISTHLGADGTQGEALYLPAGGRPTSG 201 (318)
T ss_pred EEEEEehhhcC-cCCcCCCC---eEEEEecceeEEEEeecCCCC-----c---EEEEEEEEcCCCcceEEECCCCcCCCC
Confidence 99999999876 33444554 356899999999999877532 1 334455667766665554432211
Q ss_pred ceee--eechhHHHHHHHHhhhhhhhcCCCccchhHHHHHHHHHHHHhhhcc-ccCCcccchhccccEEEeccCCHHHHH
Q 011007 323 KVGI--SLSKDLMAIAGEALKSNITTIGPLVLPASEQLLFLMTLIGRKIFNP-KWKPYIPDFKQAFEHFCIHAGGRAVID 399 (496)
Q Consensus 323 ~~g~--~ls~d~~~v~g~~l~~~i~~~gp~vlp~~e~~~~~~~~~~~~v~~~-~~~~~~p~~~~did~f~~H~~~~~v~~ 399 (496)
..++ ...++..+ +...... ...++++++ .++ .+||+||++||+++++++
T Consensus 202 ~~~~~~~~~~~~~~---------------------~~~~~~~-~~~~~~l~~~g~~------~~di~~~~~h~~~~~~~~ 253 (318)
T TIGR00747 202 PSPFITMEGNEVFK---------------------HAVRKMG-DVVEETLEANGLD------PEDIDWFVPHQANLRIIE 253 (318)
T ss_pred CCCceEECCHHHHH---------------------HHHHHHH-HHHHHHHHHcCCC------HHHCCEEEECCCCHHHHH
Confidence 0000 00111110 0000000 112333332 222 489999999999999999
Q ss_pred HHHHHcCCChhhHhhhhhhhcccCCccCCchHHHHHHHHHhCCCCCCCEEEEEeechhHhhhheeeEe
Q 011007 400 ELQKNLQLSAEHVEASRMTLHRFGNTSSSSLWYEMSYIEEKGRMKKGDRVWQIAFGSGFKCNSAVWKC 467 (496)
Q Consensus 400 ~i~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~i~~Gd~Vll~~fG~G~~~~sav~r~ 467 (496)
.+++.||++++|+ ..++++||||+|+|++++|++++++|++++||+|+++++|+|++|+++++||
T Consensus 254 ~~~~~lgi~~~k~---~~~~~~~Gn~~sas~~~~L~~~~~~~~~~~Gd~vll~~~G~G~t~~~~~l~~ 318 (318)
T TIGR00747 254 ALAKRLELDMSQV---VKTVHKYGNTSAASIPLALDELLRTGRIKPGDLLLLVAFGGGLTWGAALVRF 318 (318)
T ss_pred HHHHHcCCCHHHe---eehHhhhCCHHHHHHHHHHHHHHHcCCCCCCCEEEEEEEehhheeeEEEEEC
Confidence 9999999999999 4789999999999999999999999999999999999999999999999986
No 26
>PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=1.5e-42 Score=353.66 Aligned_cols=309 Identities=22% Similarity=0.349 Sum_probs=242.2
Q ss_pred ceEEEEeeeecCCCCcccChHHHHHHHhhhhcCCcchHHHHHHHHHHcCCCceeecCCCCcCCCCCCchHHHHHhHHHHH
Q 011007 87 HVYLVDYACYKPPVTCRVPFATFMEHSRLILKNNPKSVEFQMRILERSGLGEETCLPPAIHYIPPTPTMEAARGEAELVI 166 (496)
Q Consensus 87 ~v~Iv~~~~y~P~~~~~v~~~~~~e~~~~~~~~~~~~~~f~~~i~~~sGi~~r~~~~~~~~~~~~~~~~~~~~~ea~~la 166 (496)
.|+|.++++|+|+ ++++++++.+..+. ++ ++|.+++|+++|+++.+++. ..+|+
T Consensus 3 ~v~I~ai~~~lP~--~~~~~~~~~~~~~~----~~------~~i~~~~gi~~r~~~~~~~~--------------~~~la 56 (319)
T PRK09352 3 YAKILGTGSYLPE--RVVTNDDLEKMVDT----SD------EWIVTRTGIKERRIAAPDET--------------TSDLA 56 (319)
T ss_pred ceEEEEEEEECCC--eEEcHHHHHHHcCC----CH------HHhhhhcCeEEEEeCCCCCC--------------HHHHH
Confidence 6899999999999 89999999997653 22 36888999999998776653 68999
Q ss_pred HHHHHHHHHHcCCCcCCcCEEEeecc-CCCCCCcHHHHHHHHcCCCCCceeeEecCCCcchHHHHHHHHHHHHhcCCCCE
Q 011007 167 FSAMDSLLQKTGLKPKDIDILIVNCS-LFSPTPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLLQVHPNSN 245 (496)
Q Consensus 167 ~~Aa~~aL~~agi~p~dID~LI~~ss-~~~~~Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL~~~~~~~ 245 (496)
.+|++++|+++|++++|||.+|++++ +++..|+.+..|+.++|++ ++.+++++ ++|++++.||.+|.+++++|+.++
T Consensus 57 ~~A~~~al~~agl~~~~id~vi~~~~~~~~~~~~~~~~i~~~lG~~-~~~~~~v~-~~Casg~~al~~A~~~i~~g~~~~ 134 (319)
T PRK09352 57 TEAAKKALEAAGIDPEDIDLIIVATTTPDYAFPSTACLVQARLGAK-NAAAFDLS-AACSGFVYALSTADQFIRSGAYKN 134 (319)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCchHHHHHHHHhCCC-CCcEeecc-ccchhHHHHHHHHHHHHHcCCCCE
Confidence 99999999999999999999998865 5667899999999999996 78999999 699999999999999999999999
Q ss_pred EEEEEECCCCCCCccCCCccccccccccccccEEEEEeccCCcccccceeEeeEEEEEecCCcccccceeecccCCCce-
Q 011007 246 AVVVSTEIITPNYYQGNERAMLLPNCLFRMGGAAILLSNRRRNRSRAKYRLVHVVRTHKGADDKAYRCVFEEEDKEGKV- 324 (496)
Q Consensus 246 aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAaA~lLs~~~~~~~~~~~~L~~~~~t~~~~d~~~~~~~~~~~d~~G~~- 324 (496)
|||+++|.++. ++...++. ...+|||||+|+||++++.. .+ ..++..++++.++.+..+.++....
T Consensus 135 vLvv~~e~~s~-~~~~~~~~---~~~~~gDGaaA~ll~~~~~~------~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (319)
T PRK09352 135 VLVIGAEKLSR-IVDWTDRS---TCVLFGDGAGAVVLGASEEP------GI---LSTHLGSDGSYGDLLYLPGGGSRGPA 201 (319)
T ss_pred EEEEEehhhcc-ccCcccCC---ceEEEeccceEEEEEEcCCC------Ce---EEEEEEEcCCCCCeEEeCCCCCCCCC
Confidence 99999999886 33444544 35799999999999987642 12 2334455665555444333211000
Q ss_pred --e-e-eechhHHHHHHHHhhhhhhhcCCCccchhHHHHHHHHHHHHhhhcc-ccCCcccchhccccEEEeccCCHHHHH
Q 011007 325 --G-I-SLSKDLMAIAGEALKSNITTIGPLVLPASEQLLFLMTLIGRKIFNP-KWKPYIPDFKQAFEHFCIHAGGRAVID 399 (496)
Q Consensus 325 --g-~-~ls~d~~~v~g~~l~~~i~~~gp~vlp~~e~~~~~~~~~~~~v~~~-~~~~~~p~~~~did~f~~H~~~~~v~~ 399 (496)
+ + ...++++..... .... ..++++++ .++ ++|||||++|++|+.+++
T Consensus 202 ~~~~~~~~~~~~~~~~~~---------------------~~~~-~i~~~l~~~g~~------~~di~~~~~h~~~~~~~~ 253 (319)
T PRK09352 202 SPGYLRMEGREVFKFAVR---------------------ELAK-VAREALEAAGLT------PEDIDWLVPHQANLRIID 253 (319)
T ss_pred CCCceEECCHHHHHHHHH---------------------HHHH-HHHHHHHHcCCC------HHHCCEEEECCCCHHHHH
Confidence 0 0 001111111000 0001 11333332 232 489999999999999999
Q ss_pred HHHHHcCCChhhHhhhhhhhcccCCccCCchHHHHHHHHHhCCCCCCCEEEEEeechhHhhhheeeEe
Q 011007 400 ELQKNLQLSAEHVEASRMTLHRFGNTSSSSLWYEMSYIEEKGRMKKGDRVWQIAFGSGFKCNSAVWKC 467 (496)
Q Consensus 400 ~i~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~i~~Gd~Vll~~fG~G~~~~sav~r~ 467 (496)
.+++.||++++++ ..++++|||++++|++++|++++++|++++||++++++||+|++|+++++||
T Consensus 254 ~~~~~lg~~~~~~---~~~~~~~Gn~~~a~~~~~L~~~~~~g~~~~Gd~vll~s~G~G~~~~~~ll~~ 318 (319)
T PRK09352 254 ATAKKLGLPMEKV---VVTVDKYGNTSAASIPLALDEAVRDGRIKRGDLVLLEGFGGGLTWGAALVRW 318 (319)
T ss_pred HHHHHhCCCHHHh---hhhHHhhCCHHHHHHHHHHHHHHHcCCCCCCCEEEEEEEchhheeEEEEEEe
Confidence 9999999999998 5789999999999999999999999999999999999999999999999997
No 27
>PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=5e-42 Score=358.32 Aligned_cols=346 Identities=18% Similarity=0.231 Sum_probs=238.2
Q ss_pred ceEEEEeeeecCCCCcccChHHHHHHHhhhhcCCcchHHHHHHHHHHcCCCceeecCCCCcCCCCCCchHHHHHhHHHHH
Q 011007 87 HVYLVDYACYKPPVTCRVPFATFMEHSRLILKNNPKSVEFQMRILERSGLGEETCLPPAIHYIPPTPTMEAARGEAELVI 166 (496)
Q Consensus 87 ~v~Iv~~~~y~P~~~~~v~~~~~~e~~~~~~~~~~~~~~f~~~i~~~sGi~~r~~~~~~~~~~~~~~~~~~~~~ea~~la 166 (496)
+++|.++++|+|+ ++|+|+++.+.++... +......+||++++||.+|+++.++.. .+.. .+.+|+
T Consensus 2 ~v~I~gig~~lP~--~~v~n~~~~~~~~~~~---~~~~~~~~~i~~~~Gi~~R~~~~~~~~--~~~~-------~~~~La 67 (378)
T PRK06816 2 NVYITSTGAFLPG--EPVSNDEMEAYLGLIN---GKPSRARRIILRNNGIKTRHYALDPEG--RPTH-------SNAQMA 67 (378)
T ss_pred CeEEEeeeecCCC--CccCHHHHHHHHhhcc---CCcHHHHHHHHHhCCCceEEEEECCCC--CCCC-------CHHHHH
Confidence 4899999999999 8999999998876422 111112358999999999999754321 0111 268999
Q ss_pred HHHHHHHHHHcCCCcCCcCEEEeecc-CCCCCCcHHHHHHHHcCCCCCceeeEecCCCcchHHHHHHHHHHHHhcCCCCE
Q 011007 167 FSAMDSLLQKTGLKPKDIDILIVNCS-LFSPTPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLLQVHPNSN 245 (496)
Q Consensus 167 ~~Aa~~aL~~agi~p~dID~LI~~ss-~~~~~Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL~~~~~~~ 245 (496)
.+|+++||+++|++|+|||.||++|+ +++..|+.+..|+++||++ ++.+++++ ++|+|++.||++|.+++++++.++
T Consensus 68 ~~A~~~aL~~agi~~~dId~li~~s~~~~~~~p~~a~~v~~~Lgl~-~~~~~~v~-~~Cas~~~al~~A~~~i~sg~~~~ 145 (378)
T PRK06816 68 AEAIRDLLDDAGFSLGDIELLACGTSQPDQLMPGHASMVHGELGAP-PIEVVSSA-GVCAAGMMALKYAYLSVKAGESRN 145 (378)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEECCCCcCChHHHHHHHhhCCCC-CCceeeec-CcCHHHHHHHHHHHHHHHCCCCCE
Confidence 99999999999999999999999874 5688999999999999998 68899998 699999999999999999999999
Q ss_pred EEEEEECCCCCCCccCCC------------c--ccc----ccccccccccEEEEEeccCCcccccceeEeeEEEEEecCC
Q 011007 246 AVVVSTEIITPNYYQGNE------------R--AML----LPNCLFRMGGAAILLSNRRRNRSRAKYRLVHVVRTHKGAD 307 (496)
Q Consensus 246 aLVVs~E~~s~~~~~~~d------------r--~~l----~~~~lfgDGAaA~lLs~~~~~~~~~~~~L~~~~~t~~~~d 307 (496)
||||++|.+|..+ ++++ + ... ..+++|||||+|+||++.+... +..+ ++......++
T Consensus 146 vLvv~~E~~s~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fGDGA~A~vl~~~~~~~---g~~l-~~~~~~~~~~ 220 (378)
T PRK06816 146 AVATASELASRWF-RASRFEAEEEKLAELEENPEIAFEKDFLRWMLSDGAGAVLLENKPRPD---GLSL-RIDWIDLRSY 220 (378)
T ss_pred EEEEeEccchhhh-hhhhhhhHHHHhhcCcccCCCCCCCCCCCEeeecccEEEEEEecCCCC---CceE-EEEEEeeecc
Confidence 9999999998733 2111 1 000 0135799999999999866431 2111 1111122233
Q ss_pred cccccceeecccC---CC-ceeee-echhHHHHHHHHhhhhhhhcCCCccchhHHHHHHHHHHHHhhhcc-ccCCcccch
Q 011007 308 DKAYRCVFEEEDK---EG-KVGIS-LSKDLMAIAGEALKSNITTIGPLVLPASEQLLFLMTLIGRKIFNP-KWKPYIPDF 381 (496)
Q Consensus 308 ~~~~~~~~~~~d~---~G-~~g~~-ls~d~~~v~g~~l~~~i~~~gp~vlp~~e~~~~~~~~~~~~v~~~-~~~~~~p~~ 381 (496)
...+..++..... ++ ..++. ...+-+...+. ..+...++.+ .+.+........++++++ .++
T Consensus 221 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~---~~~~~~~~~~~i~~~L~~~gl~------ 288 (378)
T PRK06816 221 AGELPVCMYAGAEKNEDGSLKGWSDYPPEEAEAASA---LSLKQDVRLL---NENIVVYTIKPLLELVDKRNLD------ 288 (378)
T ss_pred cccCccceecCCccCCCCCccCcccCCHHHHHhccC---chHHhHHHHH---HHHhHHHHHHHHHHHHHHcCCC------
Confidence 2222222211100 00 00000 00000000000 0000000000 000000101111333432 232
Q ss_pred hccccEEEeccCCHHHHHHHHHHc-----CCChhhHhhhhhhhcccCCccCCchHHHHHHHHHhCCCCCCCEEEEEeech
Q 011007 382 KQAFEHFCIHAGGRAVIDELQKNL-----QLSAEHVEASRMTLHRFGNTSSSSLWYEMSYIEEKGRMKKGDRVWQIAFGS 456 (496)
Q Consensus 382 ~~did~f~~H~~~~~v~~~i~~~L-----gl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~i~~Gd~Vll~~fG~ 456 (496)
.+|||+|++||+|.++++.+.+.| |++++|+ ..++++||||+|||+|++|++++++|++++||+|++++.|+
T Consensus 289 ~~DId~~v~Hq~n~~~~~~v~~~l~~~~~gl~~~k~---~~~~~~~GNt~sAsipi~L~~a~~~g~~~~Gd~vl~~~~~s 365 (378)
T PRK06816 289 PDDIDYFLPHYSSEYFREKIVELLAKAGFMIPEEKW---FTNLATVGNTGSASIYIMLDELLNSGRLKPGQKILCFVPES 365 (378)
T ss_pred hhhCCEEeeCcccHHHHHHHHHHHHhccCCCChhhe---EEeccccccccchHHHHHHHHHHHcCCCCCCCEEEEEEecc
Confidence 489999999999999999999988 9999998 68999999999999999999999999999999999998887
Q ss_pred h-HhhhheeeEee
Q 011007 457 G-FKCNSAVWKCN 468 (496)
Q Consensus 457 G-~~~~sav~r~~ 468 (496)
| ++++.+++.|.
T Consensus 366 ~~~~~~~~~~~~~ 378 (378)
T PRK06816 366 GRFSTAFMLLTVV 378 (378)
T ss_pred cchhheeEEEEEC
Confidence 6 99999999873
No 28
>PRK04262 hypothetical protein; Provisional
Probab=100.00 E-value=2.4e-42 Score=356.79 Aligned_cols=310 Identities=17% Similarity=0.248 Sum_probs=234.0
Q ss_pred ceEEEEeeeecCCCCcccChHHHHHHHhhhhcCCcchHHHHHHHHHHcCCCceeecCCCCcCCCCCCchHHHHHhHHHHH
Q 011007 87 HVYLVDYACYKPPVTCRVPFATFMEHSRLILKNNPKSVEFQMRILERSGLGEETCLPPAIHYIPPTPTMEAARGEAELVI 166 (496)
Q Consensus 87 ~v~Iv~~~~y~P~~~~~v~~~~~~e~~~~~~~~~~~~~~f~~~i~~~sGi~~r~~~~~~~~~~~~~~~~~~~~~ea~~la 166 (496)
.++|.+++.|+|+ ++++|+++.+..+. +++ ||.+++||.+|+++++++. +.+|+
T Consensus 2 ~v~I~~~g~ylP~--~~v~~~el~~~~~~----~~~------~i~~~~Gi~~R~~~~~~~~--------------~~~la 55 (347)
T PRK04262 2 MVGIVGYGAYIPR--YRIKVEEIARVWGD----DPE------AIKRGLGVEEKSVPGPDED--------------TATIA 55 (347)
T ss_pred ceeEEEEEEeCCC--EEecHHHHHHHhCc----CHH------HHhhccCeeeeecCCCCcC--------------HHHHH
Confidence 5899999999999 89999999988663 333 7899999999999877654 68999
Q ss_pred HHHHHHHHHHcCCCcCCcCEEEeecc-CCCCCCcHHHHHHHHcCCCCCceeeEecCCCcchHHHHHHHHHHHHhcCCCCE
Q 011007 167 FSAMDSLLQKTGLKPKDIDILIVNCS-LFSPTPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLLQVHPNSN 245 (496)
Q Consensus 167 ~~Aa~~aL~~agi~p~dID~LI~~ss-~~~~~Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL~~~~~~~ 245 (496)
.+|++++|+++|++|+|||.||++|+ +++..|+.+.+|+++||+++++.++|++ +||+|++.||++|.+++++++.++
T Consensus 56 ~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~~p~~a~~v~~~Lgl~~~~~~~dv~-~~C~~~~~aL~~A~~~i~sg~~~~ 134 (347)
T PRK04262 56 VEAARNALKRAGIDPKEIGAVYVGSESHPYAVKPTATIVAEALGATPDLTAADLE-FACKAGTAALQAAMGLVKSGMIKY 134 (347)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEecCCCcccccHHHHHHHHcCCCCCceEEEHH-HhHHHHHHHHHHHHHHHHcCCCCE
Confidence 99999999999999999999998864 5778899999999999998678899998 699999999999999999999999
Q ss_pred EEEEEECCCCCCCccCCCccccccccccccccEEEEEeccCCcccccceeEeeEEEEEecCCcccccceeecccCCCcee
Q 011007 246 AVVVSTEIITPNYYQGNERAMLLPNCLFRMGGAAILLSNRRRNRSRAKYRLVHVVRTHKGADDKAYRCVFEEEDKEGKVG 325 (496)
Q Consensus 246 aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAaA~lLs~~~~~~~~~~~~L~~~~~t~~~~d~~~~~~~~~~~d~~G~~g 325 (496)
||||++|.... ++.++. ...|||||+|+||++.+. ..++.+... ..+|+. +.+..+.......+
T Consensus 135 aLVv~~e~~~~---~~~~~~----~~~~GDGA~A~ll~~~~~-----~~~i~~~~~--~~~d~~--d~~~~~~~~~~~~~ 198 (347)
T PRK04262 135 ALAIGADTAQG---APGDAL----EYTAAAGGAAFIIGKEEV-----IAEIEATYS--YTTDTP--DFWRREGEPYPRHG 198 (347)
T ss_pred EEEEEEeeecc---CCCCCC----CCcCCCCcEEEEEecCcc-----cceeecccc--ccccch--hhcCCCCCcCCCcC
Confidence 99999998432 223432 246899999999997442 233332211 112221 11111000000000
Q ss_pred eeechhHHHHHHHHhhhhhhhcCCCccchhHHHHHHHHHHHHhhhcc-ccCCcccchhccccEEEeccCCHHHHHHHHHH
Q 011007 326 ISLSKDLMAIAGEALKSNITTIGPLVLPASEQLLFLMTLIGRKIFNP-KWKPYIPDFKQAFEHFCIHAGGRAVIDELQKN 404 (496)
Q Consensus 326 ~~ls~d~~~v~g~~l~~~i~~~gp~vlp~~e~~~~~~~~~~~~v~~~-~~~~~~p~~~~did~f~~H~~~~~v~~~i~~~ 404 (496)
..+.++ +.. ++. +....++++++ .+. .+|||+|++||+|+++++.+++.
T Consensus 199 ~~~~~~-~~~----------------------~~~-~~~~i~~~L~~~gl~------~~dId~~v~Hq~n~~~~~~~~~~ 248 (347)
T PRK04262 199 GRFTGE-PAY----------------------FKH-IISAAKGLMEKLGLK------PSDYDYAVFHQPNGKFPLRVAKM 248 (347)
T ss_pred ceecch-HHH----------------------HHH-HHHHHHHHHHHhCcC------HHHhceeecCCCchHHHHHHHHH
Confidence 011110 000 000 11111333332 222 48999999999999999999999
Q ss_pred cCCChhhHhhhhhhhcccCCccCCchHHHHHHHHHhCCCCCCCEEEEEeechhHhhhheeeEeeccCC
Q 011007 405 LQLSAEHVEASRMTLHRFGNTSSSSLWYEMSYIEEKGRMKKGDRVWQIAFGSGFKCNSAVWKCNKTIK 472 (496)
Q Consensus 405 Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~i~~Gd~Vll~~fG~G~~~~sav~r~~~~~~ 472 (496)
||++++|+..+. ++++||||||+|+|++|+.+++ ++++||+|++++||+|+++.+++|++.+...
T Consensus 249 Lgl~~ek~~~~~-~~~~~GNt~sAsi~~~L~~~~~--~~~~Gd~vll~~~G~G~~~~~~~~~~~~~~~ 313 (347)
T PRK04262 249 LGFTKEQVKPGL-LTPYIGNTYSGSALLGLAAVLD--VAKPGDRILVVSFGSGAGSDAFSITVTDAIE 313 (347)
T ss_pred cCCCHHHhhccc-hhhhhCChHHHHHHHHHHHHHH--hCCCCCEEEEEecCCCcceeeEEEEechhHH
Confidence 999999996433 6899999999999999999987 4899999999999999999999999976654
No 29
>TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative. Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound.
Probab=100.00 E-value=2.7e-42 Score=356.14 Aligned_cols=318 Identities=16% Similarity=0.209 Sum_probs=236.6
Q ss_pred eEEEEeeeecCCCCcccChHHHHHHHhhhhcCCcchHHHHHHHHHHcCCCceeecCCCCcCCCCCCchHHHHHhHHHHHH
Q 011007 88 VYLVDYACYKPPVTCRVPFATFMEHSRLILKNNPKSVEFQMRILERSGLGEETCLPPAIHYIPPTPTMEAARGEAELVIF 167 (496)
Q Consensus 88 v~Iv~~~~y~P~~~~~v~~~~~~e~~~~~~~~~~~~~~f~~~i~~~sGi~~r~~~~~~~~~~~~~~~~~~~~~ea~~la~ 167 (496)
++|.++++|+|+ ++++|+++.+..+. +++ +|.+++||++|+++++++. +.+|+.
T Consensus 2 ~~I~g~g~~lP~--~~v~n~~l~~~~~~----~~~------~i~~~~Gi~~r~v~~~~~~--------------~~~la~ 55 (345)
T TIGR00748 2 AGIVGYGAYIPM--YRIKVEEIARVWGK----DPE------SISNGLPVEEKAVPGLDED--------------TATIGV 55 (345)
T ss_pred ccEEEEEEeCCC--eeecHHHHHHHhCC----CHh------HeeeccceeeeecCCCCCC--------------HHHHHH
Confidence 679999999999 89999999887653 333 6888999999999987764 689999
Q ss_pred HHHHHHHHHcCCCcCCcCEEEeecc-CCCCCCcHHHHHHHHcCCCCCceeeEecCCCcchHHHHHHHHHHHHhcCCCCEE
Q 011007 168 SAMDSLLQKTGLKPKDIDILIVNCS-LFSPTPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLLQVHPNSNA 246 (496)
Q Consensus 168 ~Aa~~aL~~agi~p~dID~LI~~ss-~~~~~Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL~~~~~~~a 246 (496)
+|+++||+++|++|+|||.||++|+ +++..|+.+..|+++||+++++.++|++ .||+|++.||++|.++++++..++|
T Consensus 56 ~Aa~~aL~~agl~~~dID~li~~s~~~~~~~p~~a~~v~~~LGl~~~~~~~dv~-~aC~g~~~al~~A~~~i~sg~~~~v 134 (345)
T TIGR00748 56 EAARNALKRAKIDPKDIGAVYVGSESHPYAVKPTATIVAEAIGATPDLTAADLE-FACKAGTAGIQACMGLVASGMIKYG 134 (345)
T ss_pred HHHHHHHHHcCCCHHHCCEEEEEecCCCccccchHHHHHHHcCCCCCceEEEHH-HhHHHHHHHHHHHHHHHHcCCCCEE
Confidence 9999999999999999999998864 6677899999999999997688999999 5999999999999999999999999
Q ss_pred EEEEECCCCCCCccCCCccccccccccccccEEEEEeccCCcccccceeEeeEEEEEecCCcc-cccceeecccCCCcee
Q 011007 247 VVVSTEIITPNYYQGNERAMLLPNCLFRMGGAAILLSNRRRNRSRAKYRLVHVVRTHKGADDK-AYRCVFEEEDKEGKVG 325 (496)
Q Consensus 247 LVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAaA~lLs~~~~~~~~~~~~L~~~~~t~~~~d~~-~~~~~~~~~d~~G~~g 325 (496)
|||++|..+.. ..|+. ...|||||+|+||++.+.. .++.+.. ...+|+. .++.........+ +
T Consensus 135 LVv~~d~~~~~---~~~~~----~~~~GDGAaA~vl~~~~~~-----~~~~~~~--~~~~d~~~~~~~~~~~~~~~~--~ 198 (345)
T TIGR00748 135 LAIGADTAQGA---PGDAL----EYTAGAGGAAYIIGEKNTV-----AYFEGTY--SYTTDTPDFWRREGEPYPRHG--G 198 (345)
T ss_pred EEEEEeecccC---CCccC----cccCCCceEEEEEccCCcc-----eEeeccc--ceecccccccccCCCcCCCcC--C
Confidence 99999998742 23332 3578999999999965421 1221111 1122221 1110000000000 0
Q ss_pred eeechhHHHHHHHHhhhhhhhcCCCccchhHHHHHHHHHHHHhhhcc-ccCCcccchhccccEEEeccCCHHHHHHHHHH
Q 011007 326 ISLSKDLMAIAGEALKSNITTIGPLVLPASEQLLFLMTLIGRKIFNP-KWKPYIPDFKQAFEHFCIHAGGRAVIDELQKN 404 (496)
Q Consensus 326 ~~ls~d~~~v~g~~l~~~i~~~gp~vlp~~e~~~~~~~~~~~~v~~~-~~~~~~p~~~~did~f~~H~~~~~v~~~i~~~ 404 (496)
.... .+ +-+++... ..++++++ .+. .+|||+|++||+|+++++.+.+.
T Consensus 199 -~~~~-~~----------------------~~~~~~~~-~~~~~L~~~gl~------~~did~~i~Hq~~~~~~~~~~~~ 247 (345)
T TIGR00748 199 -RFTG-EP----------------------AYFHHVVT-AAKGLMEKLGLT------PEDFDYAVFHQPNGKFYLVAARM 247 (345)
T ss_pred -eecC-hH----------------------HHHHHHHH-HHHHHHHHcCCC------HHHcCEEEeCCCChHHHHHHHHH
Confidence 0000 00 00111111 12344432 222 48999999999999999999999
Q ss_pred cCCChhhHhhhhhhhcccCCccCCchHHHHHHHHHhCCCCCCCEEEEEeechhHhhhheeeEeeccCCCCCCCCCccccc
Q 011007 405 LQLSAEHVEASRMTLHRFGNTSSSSLWYEMSYIEEKGRMKKGDRVWQIAFGSGFKCNSAVWKCNKTIKTTTDNPWSDCID 484 (496)
Q Consensus 405 Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~i~~Gd~Vll~~fG~G~~~~sav~r~~~~~~~~~~~~w~~~~~ 484 (496)
||++++++..+. ..++||||+|+|+|+.|+++++ ++++||+|++++||+|++|++++|++.+.... ..+|+..|+
T Consensus 248 lgl~~ek~~~~~-~~~~~GNt~sAsipl~L~~~~~--~~~~Gd~vll~~~G~G~s~~~~~~~~~~~~~~--~~~~~~~~~ 322 (345)
T TIGR00748 248 LGFPKEQVKPGL-LTPRIGNTYSGATPVGLSAVLD--IAEPGDRILAVSYGSGAGSDAFSIVVQDAIEE--KRDLAPKVA 322 (345)
T ss_pred cCCCHHHeeccc-cccccCchhhhHHHHHHHHHHH--hcCCCCEEEEEEecCCcceeEEEEEEchhHHH--HhhhhhhHH
Confidence 999999984211 2489999999999999999986 68999999999999999999999999876653 246864343
No 30
>PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=1.7e-40 Score=346.22 Aligned_cols=345 Identities=15% Similarity=0.201 Sum_probs=234.4
Q ss_pred ceEEEEeeeecCCCCcccChHHHHHHHhhh-hcCCcch---H----------HHHHHHHHHcCCCceeecCCC----CcC
Q 011007 87 HVYLVDYACYKPPVTCRVPFATFMEHSRLI-LKNNPKS---V----------EFQMRILERSGLGEETCLPPA----IHY 148 (496)
Q Consensus 87 ~v~Iv~~~~y~P~~~~~v~~~~~~e~~~~~-~~~~~~~---~----------~f~~~i~~~sGi~~r~~~~~~----~~~ 148 (496)
+++|+++|+|+|+ ++++|+++.++++.. ..|.++. + ...++|.+++||.+|+++.++ ...
T Consensus 2 ~~~I~~~g~~lP~--~~v~n~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~ 79 (372)
T PRK07515 2 NVVISGTGLYTPP--ESISNEELVASFNAYVERFNAENAAAIAAGEVEALQPSSSEFIEKASGIKSRYVMDKEGILDPDR 79 (372)
T ss_pred CcEEEEEEeecCC--ccccHHHHHHHHhhhhhhhcccchhhhccccccccCCCCHHHhhhccCCceEEEecccccCcccc
Confidence 5899999999999 889999999886421 1111100 0 013578899999999997542 111
Q ss_pred CCCC--CchHHHHHhHHHHHHHHHHHHHHHcCCCcCCcCEEEeecc-CCCCCCcHHHHHHHHcCCCCCceeeEecCCCcc
Q 011007 149 IPPT--PTMEAARGEAELVIFSAMDSLLQKTGLKPKDIDILIVNCS-LFSPTPSLSAMVINKYKLRSNIKSFNLSGMGCS 225 (496)
Q Consensus 149 ~~~~--~~~~~~~~ea~~la~~Aa~~aL~~agi~p~dID~LI~~ss-~~~~~Ps~a~~I~~~Lgl~~~~~~~dl~g~gCs 225 (496)
.++. .........+.+|+..|++++|+++|++++|||.||++|+ +++..|+.+.+|+++||++ ..+++++ ++|+
T Consensus 80 ~~~~~~~r~~~~~~~~~~la~~Aa~~aL~~agl~~~~Id~li~~~~~~~~~~p~~a~~v~~~Lgl~--~~~~~v~-~aCa 156 (372)
T PRK07515 80 MRPRIPERSNDELSIQAEMGVAAARQALARAGRTAEDIDAVIVACSNMQRAYPAMAIEIQQALGIE--GFAFDMN-VACS 156 (372)
T ss_pred cCcccccccccchhhHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCcHHHHHHHHhcCCC--CcEEEec-chhH
Confidence 0110 0111111235789999999999999999999999998875 5788999999999999996 5789999 7999
Q ss_pred hHHHHHHHHHHHHhcCCCCEEEEEEECCCCCCCccCCCccccccccccccccEEEEEeccCCcccccceeEeeEEEEEec
Q 011007 226 AGLISIDLARDLLQVHPNSNAVVVSTEIITPNYYQGNERAMLLPNCLFRMGGAAILLSNRRRNRSRAKYRLVHVVRTHKG 305 (496)
Q Consensus 226 g~l~al~lA~~lL~~~~~~~aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAaA~lLs~~~~~~~~~~~~L~~~~~t~~~ 305 (496)
+++.||.+|.++++++..++||||++|.++.. .+..|+. +..+|||||+|+||++.+....+.+|++++. ...
T Consensus 157 sg~~al~~A~~~i~~g~~~~vLvv~~e~~s~~-~~~~d~~---~~~lfGDgAaA~vL~~~~~~~~~~~~~il~~---~~~ 229 (372)
T PRK07515 157 SATFGIQTAANAIRSGSARRVLVVNPEICSGH-LNFRDRD---SHFIFGDVATAVIVERADTATSAGGFEILGT---RLF 229 (372)
T ss_pred HHHHHHHHHHHHHHcCCCCEEEEEeeeccccc-ccccCCC---CCEEecCccEEEEEeeccccccCCCceEEEE---Eee
Confidence 99999999999999999999999999998863 3445654 4689999999999998664322234555443 222
Q ss_pred CCcccccceeecccCCCceeeeechhHHHHHHHHhhhhhhhcCCCccchhHHHHHHHHHHHHhhhcc-ccCCcccchhcc
Q 011007 306 ADDKAYRCVFEEEDKEGKVGISLSKDLMAIAGEALKSNITTIGPLVLPASEQLLFLMTLIGRKIFNP-KWKPYIPDFKQA 384 (496)
Q Consensus 306 ~d~~~~~~~~~~~d~~G~~g~~ls~d~~~v~g~~l~~~i~~~gp~vlp~~e~~~~~~~~~~~~v~~~-~~~~~~p~~~~d 384 (496)
++. .+.+..+. |. +.....+-+... ...+...|+.++ .+-.. .+....+++++. .++ .+|
T Consensus 230 ~~~--~~~~~~~~---G~-~~~~~~~~~~~~----~~~~~~~g~~~~--~~~~~-~~~~~i~~~L~~~gl~------~~d 290 (372)
T PRK07515 230 TQF--SNNIRNNF---GF-LNRADPEGIGAR----DKLFVQEGRKVF--KEVCP-MVAEHIVEHLAENGLT------PAD 290 (372)
T ss_pred ccc--ccceecCC---CC-CCCCCccccccc----cceEEeccHHHH--HHHHH-HHHHHHHHHHHHcCCC------HHH
Confidence 211 11111110 00 000000000000 000111111110 00000 011112334432 233 489
Q ss_pred ccEEEeccCCHHHHHHHHHH-cCCC--hhhHhhhhhhhcccCCccCCchHHHHHHHHHhCCCCCCCEEEEEeechhHhhh
Q 011007 385 FEHFCIHAGGRAVIDELQKN-LQLS--AEHVEASRMTLHRFGNTSSSSLWYEMSYIEEKGRMKKGDRVWQIAFGSGFKCN 461 (496)
Q Consensus 385 id~f~~H~~~~~v~~~i~~~-Lgl~--~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~i~~Gd~Vll~~fG~G~~~~ 461 (496)
||+|++||+|+++++.+.+. ||++ +++. +.++++||||+|+|++++|+++. +++++||+|++++||+|++|+
T Consensus 291 Id~~~~Hq~~~~~~d~~~~~llg~~~~~~~~---~~~~~~~GNt~sasi~~~L~~~~--~~~~~Gd~vll~~~G~G~~~~ 365 (372)
T PRK07515 291 VKRFWLHQANINMNQLIGKKVLGRDATPEEA---PVILDEYANTSSAGSIIAFHKHS--DDLAAGDLGVICSFGAGYSIG 365 (372)
T ss_pred CCEEEECCCCHHHHHHHHHHhccCCCChhhc---eEeHHhcCCchhhHHHHHHHHHh--ccCCCCCEEEEEEecccHHHH
Confidence 99999999999999999988 5654 4444 68999999999999999999874 578999999999999999999
Q ss_pred heeeEe
Q 011007 462 SAVWKC 467 (496)
Q Consensus 462 sav~r~ 467 (496)
++++|.
T Consensus 366 ~~ll~~ 371 (372)
T PRK07515 366 SVIVRK 371 (372)
T ss_pred HHHhcc
Confidence 999874
No 31
>cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes. They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues.
Probab=100.00 E-value=8.5e-40 Score=333.47 Aligned_cols=321 Identities=22% Similarity=0.299 Sum_probs=235.0
Q ss_pred ceEEEEeeeecCCCCcccChHHHHHHHhhhhcCCcchHHHHHHHHHHcCCCceeecCCCCcCCCCCCchHHHHHhHHHHH
Q 011007 87 HVYLVDYACYKPPVTCRVPFATFMEHSRLILKNNPKSVEFQMRILERSGLGEETCLPPAIHYIPPTPTMEAARGEAELVI 166 (496)
Q Consensus 87 ~v~Iv~~~~y~P~~~~~v~~~~~~e~~~~~~~~~~~~~~f~~~i~~~sGi~~r~~~~~~~~~~~~~~~~~~~~~ea~~la 166 (496)
.++|.++++|+|+ ++++++++.+..+. + ++.+++||++|++..+++. +.+|+
T Consensus 1 ~v~I~~i~~~lP~--~~v~~~~~~~~~~~----~--------~~~~~~gi~~r~~~~~~~~--------------~~~l~ 52 (324)
T cd00827 1 DVGIEAIGAYLPR--YRVDNEELAEGLGV----D--------PGKYTTGIGQRHMAGDDED--------------VPTMA 52 (324)
T ss_pred CccEEEEEecCCc--eeecHHHHHHHhCC----C--------cceeeeecceeEecCCCCC--------------HHHHH
Confidence 3789999999999 89999999887652 1 4677899999999876442 67899
Q ss_pred HHHHHHHHHHcCCCcCCcCEEEeecc-CCCCCCcHHHHHHHHcCCCCCceeeEecCCCcchHHHHHHHHHHHHhcCCCCE
Q 011007 167 FSAMDSLLQKTGLKPKDIDILIVNCS-LFSPTPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLLQVHPNSN 245 (496)
Q Consensus 167 ~~Aa~~aL~~agi~p~dID~LI~~ss-~~~~~Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL~~~~~~~ 245 (496)
.+|++++|+++|++++|||.||++++ ++...|+.+.+|++++|++ ++.+++++ +||++++.||.+|.++++++..++
T Consensus 53 ~~a~~~aL~~ag~~~~~Id~li~~~~~~~~~~~~~~~~i~~~lg~~-~~~~~~v~-~~C~s~~~al~~A~~~i~~g~~~~ 130 (324)
T cd00827 53 VEAARRALERAGIDPDDIGLLIVATESPIDKGKSAATYLAELLGLT-NAEAFDLK-QACYGGTAALQLAANLVESGPWRY 130 (324)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCccHHHHHHHHcCCC-CCceeehh-hhhHHHHHHHHHHHHHHHcCCCCE
Confidence 99999999999999999999998875 4566889999999999998 89999999 699999999999999999999999
Q ss_pred EEEEEECCCCCCCccCCCccccccccccccccEEEEEeccCCcccccceeEeeEEEEEecCCcccccceeecccCCCcee
Q 011007 246 AVVVSTEIITPNYYQGNERAMLLPNCLFRMGGAAILLSNRRRNRSRAKYRLVHVVRTHKGADDKAYRCVFEEEDKEGKVG 325 (496)
Q Consensus 246 aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAaA~lLs~~~~~~~~~~~~L~~~~~t~~~~d~~~~~~~~~~~d~~G~~g 325 (496)
+|||++|.++.... ..++ ..++|||||+|+||++.+.. ..+++ ..++..+++..+++.....+ +.
T Consensus 131 vlvv~~e~~~~~~~-~~~~----~~~~~gdgaaA~ll~~~~~~---~~~~i---~~~~~~~~~~~~~~~~~~~~--~~-- 195 (324)
T cd00827 131 ALVVASDIASYLLD-EGSA----LEPTLGDGAAAMLVSRNPGI---LAAGI---VSTHSTSDPGYDFSPYPVMD--GG-- 195 (324)
T ss_pred EEEEEEHHhhhccc-CCCC----ccccccCceEEEEEecCccc---ccCCc---eeeeeecccccccCccceec--cC--
Confidence 99999999886332 1122 46899999999999987642 12333 33455555544321000000 00
Q ss_pred eeechhHHHHHHHHhhhhhhhcCCCccchhHHHHHHHHHHHHhhhccccCCcccchhccccEEEeccCCH-HHHHHHHHH
Q 011007 326 ISLSKDLMAIAGEALKSNITTIGPLVLPASEQLLFLMTLIGRKIFNPKWKPYIPDFKQAFEHFCIHAGGR-AVIDELQKN 404 (496)
Q Consensus 326 ~~ls~d~~~v~g~~l~~~i~~~gp~vlp~~e~~~~~~~~~~~~v~~~~~~~~~p~~~~did~f~~H~~~~-~v~~~i~~~ 404 (496)
.....-.... ..+...+.. ..+.+.....+....++.++.. .+. +||++|++||+|+ .+++.+++.
T Consensus 196 --~~~~~~~~~~----~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~---~~~---~~i~~~~~h~~~~~~~~~~~~~~ 262 (324)
T cd00827 196 --YPKPCKLAYA----IRLTAEPAG-RAVFEAAHKLIAKVVRKALDRA---GLS---EDIDYFVPHQPNGKKILEAVAKK 262 (324)
T ss_pred --CCcchhhhhh----cceeecCCc-cchHHHHhHHHHHHHHHHHHHc---ccc---cccceeeccCchHHHHHHHHHHH
Confidence 0000000000 000000000 0000000001111112233211 111 6899999999999 999999999
Q ss_pred cCCChhhHhhhhh-hhcccCCccCCchHHHHHHHHHhCCCCCCCEEEEEeechhHhhhheee
Q 011007 405 LQLSAEHVEASRM-TLHRFGNTSSSSLWYEMSYIEEKGRMKKGDRVWQIAFGSGFKCNSAVW 465 (496)
Q Consensus 405 Lgl~~e~~~~S~~-~l~r~GNtsSaSi~~~La~~~~~g~i~~Gd~Vll~~fG~G~~~~sav~ 465 (496)
|+++++++.+++. ++++||||+|+|+++.|+++++++++++||+|++++||+|++|+++++
T Consensus 263 l~~~~~~~~~~~~~~~~~~Gn~~sa~~~~~L~~~~~~~~~~~Gd~vl~~~~G~G~~~~~~~~ 324 (324)
T cd00827 263 LGGPPEKASQTRWILLRRVGNMYAASILLGLASLLESGKLKAGDRVLLFSYGSGFTAEAFVL 324 (324)
T ss_pred ccchHhhhccchhhHHHHhCchHHHHHHHHHHHHHhcCCCCCCCEEEEEEeccchhheeccC
Confidence 9999999976654 899999999999999999999999999999999999999999998874
No 32
>TIGR01835 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade. This clade of hydroxymethylglutaryl-CoA (HMG-CoA) synthases is found in a limited spectrum of mostly gram-positive bacteria which make isopentenyl pyrophosphate (IPP) via the mevalonate pathway. This pathway is found primarily in eukaryotes and archaea, but the bacterial homologs are distinct, having aparrently diverged after being laterally transferred from an early eukaryote. HMG-CoA synthase is the first step in the pathway and joins acetyl-CoA with acetoacetyl-CoA with the release of one molecule of CoA. The Borellia sequence may have resulted from a separate lateral transfer event.
Probab=100.00 E-value=2e-36 Score=316.09 Aligned_cols=304 Identities=16% Similarity=0.207 Sum_probs=221.0
Q ss_pred eEEEEeeeecCCCCcccChHHHHHHHhhhhcCCcchHHHHHHHHHHcCCCceeecCCCCcCCCCCCchHHHHHhHHHHHH
Q 011007 88 VYLVDYACYKPPVTCRVPFATFMEHSRLILKNNPKSVEFQMRILERSGLGEETCLPPAIHYIPPTPTMEAARGEAELVIF 167 (496)
Q Consensus 88 v~Iv~~~~y~P~~~~~v~~~~~~e~~~~~~~~~~~~~~f~~~i~~~sGi~~r~~~~~~~~~~~~~~~~~~~~~ea~~la~ 167 (496)
|+|.+++.|+|+ ++++++++.+..+. +++ |+.+.+|++++++.++++. +.+|+.
T Consensus 1 iGI~~i~~y~P~--~~v~~~ela~~~g~----~~~------~~~~g~G~~~~~~~~~~ed--------------~~~la~ 54 (379)
T TIGR01835 1 IGIDKISFFTPQ--NYLDMTALAEARGV----DPE------KFHIGIGQKKMAVPPIDED--------------IVTMAA 54 (379)
T ss_pred CCEeEEEEECCC--EEeeHHHHHHHhCC----CHH------HHHhhcCceEEeeCCCCCC--------------HHHHHH
Confidence 579999999999 99999999987653 443 6778899999999887653 678999
Q ss_pred HHHHHHHHHcCCCcCCcCEEEeec-cCCCCCCcHHHHHHHHcCCCCCceeeEecCCCcchHHHHHHHHHHHHhcCCCCEE
Q 011007 168 SAMDSLLQKTGLKPKDIDILIVNC-SLFSPTPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLLQVHPNSNA 246 (496)
Q Consensus 168 ~Aa~~aL~~agi~p~dID~LI~~s-s~~~~~Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL~~~~~~~a 246 (496)
+|++++|+++ +|++||+||++| ++++..|+.+..|+++||+++++.++|+. ++|+|++.||++|.+++++++.++|
T Consensus 55 ~Aa~~aL~~a--~~~~Id~li~~t~s~~~~~~s~a~~v~~~Lgl~~~~~~~dv~-~aC~gg~~aL~~A~~~i~s~~~~~a 131 (379)
T TIGR01835 55 SAAKPILDRN--DKQKIDMVIFGTESGIDQSKAAAVYVHGLLGLQPFCRSFELK-QACYGATAALQMAKGHVALSPDRKV 131 (379)
T ss_pred HHHHHHHHhC--CHhhCCEEEEEeCCCCCCCCCHHHHHHHHhCCCCCceEEEec-cccHHHHHHHHHHHHHHHcCCCCeE
Confidence 9999999998 899999999986 45677899999999999998889999999 6999999999999999999999999
Q ss_pred EEEEECCCCCCCccCCCccccccccccccccEEEEEeccCCcccccceeEeeEE-EEEecCCcccccceeecccCCCcee
Q 011007 247 VVVSTEIITPNYYQGNERAMLLPNCLFRMGGAAILLSNRRRNRSRAKYRLVHVV-RTHKGADDKAYRCVFEEEDKEGKVG 325 (496)
Q Consensus 247 LVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAaA~lLs~~~~~~~~~~~~L~~~~-~t~~~~d~~~~~~~~~~~d~~G~~g 325 (496)
|||++|+... .. .+ . ...+|||||+|+||++.+. +..+. .+...+++. ++. +.+...
T Consensus 132 LVv~~D~a~~--~~-~~-~---~~~~~GdGA~A~Ll~~~~~--------i~~~~~~~~~~t~~~-~df-~~p~~~----- 189 (379)
T TIGR01835 132 LVIASDIAKY--GL-ES-P---GEPTQGAGAVAMLVSADPK--------LLAINEDSVLYTDDI-MDF-WRPNYS----- 189 (379)
T ss_pred EEEEeehhhc--cc-CC-C---CCccccCccEEEEEecCCC--------eeEEeccceeeecCC-CCc-cCCCCC-----
Confidence 9999998543 11 11 1 2468999999999997542 11110 111112221 111 122110
Q ss_pred eeechhHHHHHHHHhhhhhhhcCCCccchhHHHHHHHHH---HHHhhhccccCCcccchhccccEEEeccCCHHH----H
Q 011007 326 ISLSKDLMAIAGEALKSNITTIGPLVLPASEQLLFLMTL---IGRKIFNPKWKPYIPDFKQAFEHFCIHAGGRAV----I 398 (496)
Q Consensus 326 ~~ls~d~~~v~g~~l~~~i~~~gp~vlp~~e~~~~~~~~---~~~~v~~~~~~~~~p~~~~did~f~~H~~~~~v----~ 398 (496)
+.|.+.|+. ....|+.. ..++.+++ .+...+|||+||+||++.++ +
T Consensus 190 -----~~~~v~g~~-----------------s~~~y~~~~~~~~~~~l~~-----~g~~~~did~~i~H~p~~~~~~k~~ 242 (379)
T TIGR01835 190 -----TTALVDGQY-----------------SNEQYLNAFENAWNDYAKR-----TGLSLADFAAFCFHVPFTKMGLKAL 242 (379)
T ss_pred -----CceeECcHH-----------------HHHHHHHHHHHHHHHHHHH-----hCCCHHHcCEEEECCCCCcHHHHHH
Confidence 001111110 00011111 11222221 12225899999999997766 3
Q ss_pred HHHHHHcCCCh-hhH----hhhhhhhcccCCccCCchHHHHHHHHHhC-CCCCCCEEEEEeechhHhhhheeeEeec
Q 011007 399 DELQKNLQLSA-EHV----EASRMTLHRFGNTSSSSLWYEMSYIEEKG-RMKKGDRVWQIAFGSGFKCNSAVWKCNK 469 (496)
Q Consensus 399 ~~i~~~Lgl~~-e~~----~~S~~~l~r~GNtsSaSi~~~La~~~~~g-~i~~Gd~Vll~~fG~G~~~~sav~r~~~ 469 (496)
+.+.+.++++. +++ ++|+.+.+++|||+|+|+++.|+.+++++ ++++||+|+|++||+|+.......+...
T Consensus 243 ~~~l~~~~~~~~~~~~~~~~~s~~~~~~~GN~~sas~~l~L~~~l~~~~~~~~Gd~ill~s~GsG~~ae~~~~~~~~ 319 (379)
T TIGR01835 243 RHILKKNYEDEDESVQNAYLESIIYNREVGNLYTGSLYLGLASLLENAFEDTTGDKIGLFSYGSGAVAEFFSGTLVA 319 (379)
T ss_pred HHHHhhcccccHHHHHHHhhhhhhhhhhcCchHhHHHHHHHHHHHHhcccCCCCCEEEEEEecCCcceeeEEEEEcc
Confidence 44666777773 333 35667899999999999999999999886 7999999999999999877766666543
No 33
>PLN02577 hydroxymethylglutaryl-CoA synthase
Probab=100.00 E-value=1.6e-34 Score=305.31 Aligned_cols=311 Identities=15% Similarity=0.238 Sum_probs=220.4
Q ss_pred CCCceEEEEeeeecCCCCcccChHHHHHHHhhhhcCCcchHHHHHHHHHHcCCCceeec--CCCCcCCCCCCchHHHHHh
Q 011007 84 KPRHVYLVDYACYKPPVTCRVPFATFMEHSRLILKNNPKSVEFQMRILERSGLGEETCL--PPAIHYIPPTPTMEAARGE 161 (496)
Q Consensus 84 ~~~~v~Iv~~~~y~P~~~~~v~~~~~~e~~~~~~~~~~~~~~f~~~i~~~sGi~~r~~~--~~~~~~~~~~~~~~~~~~e 161 (496)
+|++++|.+++.|+|+ ++|+|+++.+..+. +++ |+ ++||++|++. +++| +
T Consensus 1 ~~~~vgI~gig~Y~P~--~~v~n~eLa~~~g~----~~~------~~--~~GI~~r~~ava~~~E--------------d 52 (459)
T PLN02577 1 MPKNVGILAMEVYFPP--TCVQQEALEAHDGV----SKG------KY--TIGLGQDCMAFCTDVE--------------D 52 (459)
T ss_pred CCCccEEEEEEEeCCC--eEEcHHHHHHHhCC----CHH------HH--hhccceeEeccCCCCC--------------C
Confidence 4778999999999999 89999999988663 444 44 6899999974 4544 3
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEeecc-CCCCCCcHHHHHH---HHcCCCCCceeeEecCCCcchHHHHHHHHHHH
Q 011007 162 AELVIFSAMDSLLQKTGLKPKDIDILIVNCS-LFSPTPSLSAMVI---NKYKLRSNIKSFNLSGMGCSAGLISIDLARDL 237 (496)
Q Consensus 162 a~~la~~Aa~~aL~~agi~p~dID~LI~~ss-~~~~~Ps~a~~I~---~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~l 237 (496)
+.+|++.|++++|+++|++|++||+||++|+ +++..|+.|+.|+ ++||.+ ++.+||++ .+|+||+.||++|.++
T Consensus 53 ~~tmA~~AA~~aL~~agid~~~IdllivaTeT~~d~~ps~A~~v~~ll~~LG~~-~~~afDi~-~AC~G~~~AL~~A~~~ 130 (459)
T PLN02577 53 VISMSLTVVKSLLEKYNIDPKQIGRLEVGSETVIDKSKSIKTFLMQLFEESGNT-DIEGVDST-NACYGGTAALLNCVNW 130 (459)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCchHHHHHHHHHHhCCC-CcEEeehh-hhhHHHHHHHHHHHHH
Confidence 7899999999999999999999999999974 6688999999886 678876 89999999 5999999999999999
Q ss_pred HhcCC--CCEEEEEEECCCCCCCccCCCccccccccccccccEEEEEeccCCcccccceeEeeEEEEEecCCcc-cccce
Q 011007 238 LQVHP--NSNAVVVSTEIITPNYYQGNERAMLLPNCLFRMGGAAILLSNRRRNRSRAKYRLVHVVRTHKGADDK-AYRCV 314 (496)
Q Consensus 238 L~~~~--~~~aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAaA~lLs~~~~~~~~~~~~L~~~~~t~~~~d~~-~~~~~ 314 (496)
++++. .++||||++|+.+.... + .+ ..+||||+|+||+..+.. .+.. ...++... .|+ .
T Consensus 131 i~sg~~~~~~aLVV~aD~a~~~~~-~-~e------~t~GdGA~A~lv~~~~~~------~l~~---~~~g~~~~~~~D-f 192 (459)
T PLN02577 131 VESSSWDGRYGLVVAADSAVYAEG-P-AR------PTGGAGAVAMLVGPNAPI------VFES---KYRGSHMAHVYD-F 192 (459)
T ss_pred HHcCCCCCCeEEEEEechhhccCC-C-CC------CCCCcceEEEEEccCCCc------eeec---ccccccCcccch-h
Confidence 99986 59999999999765211 1 22 356999999999964421 1111 11111211 122 2
Q ss_pred eecccCCCceeeeechhHHHHHHHHhhhhhhhcCCCccchhHHHHHHHHHH---HHhhhccc--cCCcccchhccccEEE
Q 011007 315 FEEEDKEGKVGISLSKDLMAIAGEALKSNITTIGPLVLPASEQLLFLMTLI---GRKIFNPK--WKPYIPDFKQAFEHFC 389 (496)
Q Consensus 315 ~~~~d~~G~~g~~ls~d~~~v~g~~l~~~i~~~gp~vlp~~e~~~~~~~~~---~~~v~~~~--~~~~~p~~~~did~f~ 389 (496)
+.|.... +.|.+ .|+.+ +.+|+..+ .++++++. ... -+...+|||+||
T Consensus 193 ~rP~~~~---------~~~~v-----------dG~~s------~~~yl~~~~~~~~~~~~k~~~~~~-~g~~~~d~d~~v 245 (459)
T PLN02577 193 YKPDLAS---------EYPVV-----------DGKLS------QTCYLMALDSCYKRFCEKYEKLEG-KQFSISDADYFV 245 (459)
T ss_pred cccCCCC---------CceEE-----------cchHH------HHHHHHHHHHHHHHHHHHhhcccc-cCCCHHHcCEEE
Confidence 2332110 00111 11111 11222211 12222211 100 022358999999
Q ss_pred eccCCHHHHHHHHHHcCCC----------------------------------------------hhhHhhhhhhhcccC
Q 011007 390 IHAGGRAVIDELQKNLQLS----------------------------------------------AEHVEASRMTLHRFG 423 (496)
Q Consensus 390 ~H~~~~~v~~~i~~~Lgl~----------------------------------------------~e~~~~S~~~l~r~G 423 (496)
+||+..++..+..+.|.+. .+|++||...-.+.|
T Consensus 246 fHqP~~km~~ka~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kv~ps~~~~~~vG 325 (459)
T PLN02577 246 FHAPYNKLVQKSFARLVYNDFQRNASSVDEDAKEKLAPFAGLSSDESYQNRDLEKVSQQVAKPLYDAKVQPTTLIPKQVG 325 (459)
T ss_pred ecCCccchhHHHHHHHhhhhhhhccccccchhhhccccccccchhhccccchHHHHHHHhhHHHHHHhhccHhHHHHhcC
Confidence 9999877776655554311 267788877888999
Q ss_pred CccCCchHHHHHHHHHhCC-CCCCCEEEEEeechhHhhhheeeEeec
Q 011007 424 NTSSSSLWYEMSYIEEKGR-MKKGDRVWQIAFGSGFKCNSAVWKCNK 469 (496)
Q Consensus 424 NtsSaSi~~~La~~~~~g~-i~~Gd~Vll~~fG~G~~~~sav~r~~~ 469 (496)
|+.++|+++.|..+++... ..+|+||.++++|||......-.+...
T Consensus 326 N~YTaSlyl~L~SlL~~~~~~~~G~rIg~fSYGSG~~se~fs~~v~~ 372 (459)
T PLN02577 326 NMYTASLYAALASLVHNKHSELAGKRILMFSYGSGLTATMFSLRLHE 372 (459)
T ss_pred cccchHHHHHHHHHHhhccccCCCCEEEEEeecCCccceeEEEEEeC
Confidence 9999999999999997643 459999999999999877777666554
No 34
>TIGR01833 HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synthase, eukaryotic clade. Hydroxymethylglutaryl(HMG)-CoA synthase is the first step of isopentenyl pyrophosphate (IPP) biosynthesis via the mevalonate pathway. This pathway is found mainly in eukaryotes, but also in archaea and some bacteria. This model is specific for eukaryotes.
Probab=100.00 E-value=5.4e-32 Score=285.67 Aligned_cols=316 Identities=15% Similarity=0.211 Sum_probs=214.6
Q ss_pred ceEEEEeeeecCCCCcccChHHHHHHHhhhhcCCcchHHHHHHHHHHcCCCcee--ecCCCCcCCCCCCchHHHHHhHHH
Q 011007 87 HVYLVDYACYKPPVTCRVPFATFMEHSRLILKNNPKSVEFQMRILERSGLGEET--CLPPAIHYIPPTPTMEAARGEAEL 164 (496)
Q Consensus 87 ~v~Iv~~~~y~P~~~~~v~~~~~~e~~~~~~~~~~~~~~f~~~i~~~sGi~~r~--~~~~~~~~~~~~~~~~~~~~ea~~ 164 (496)
+|+|.+++.|+|+ ++|+++++.+..+. +++ |+ .+||++|+ ++++++. +.+
T Consensus 1 ~vgI~~ig~y~P~--~~v~~~eLa~~~g~----~~~------k~--~~GI~~rr~av~~~~Ed--------------~~t 52 (454)
T TIGR01833 1 DVGILALEIYFPS--QYVDQAELEKYDGV----SAG------KY--TIGLGQTKMGFCTDRED--------------INS 52 (454)
T ss_pred CcEEEEEEEeCCC--eEEcHHHHHHhcCC----CHH------Hh--eechhheecccCCCCCC--------------HHH
Confidence 4899999999999 89999999887653 433 44 59999999 4555553 789
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEeec-cCCCCCCcHHHHHHHHcCC--CCCceeeEecCCCcchHHHHHHHHHHHHhcC
Q 011007 165 VIFSAMDSLLQKTGLKPKDIDILIVNC-SLFSPTPSLSAMVINKYKL--RSNIKSFNLSGMGCSAGLISIDLARDLLQVH 241 (496)
Q Consensus 165 la~~Aa~~aL~~agi~p~dID~LI~~s-s~~~~~Ps~a~~I~~~Lgl--~~~~~~~dl~g~gCsg~l~al~lA~~lL~~~ 241 (496)
|+..|++++|++++++|++||+||++| ++++..|+.++.|++.||+ .+++.+||++ .+|+|++.||.+|.++++++
T Consensus 53 ma~~AA~~lL~~a~id~~~Id~Liv~TeS~~d~sps~a~~v~~lL~~lG~~~~~~fDi~-~AC~G~t~AL~~A~~~i~s~ 131 (454)
T TIGR01833 53 LCLTVVSKLMERYNIDYNQIGRLEVGTETIIDKSKSVKTVLMQLFEESGNTDVEGIDTT-NACYGGTAALFNAINWIESS 131 (454)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCCchHHHHHHHHHhcCCCCceEEecc-ccchhHHHHHHHHHHHHHcC
Confidence 999999999999999999999999997 5788999999999995543 2489999999 59999999999999999988
Q ss_pred C--CCEEEEEEECCCCCCCccCCCccccccccccccccEEEEEeccCCcccccceeEeeEEEEEecCCcccccceeeccc
Q 011007 242 P--NSNAVVVSTEIITPNYYQGNERAMLLPNCLFRMGGAAILLSNRRRNRSRAKYRLVHVVRTHKGADDKAYRCVFEEED 319 (496)
Q Consensus 242 ~--~~~aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAaA~lLs~~~~~~~~~~~~L~~~~~t~~~~d~~~~~~~~~~~d 319 (496)
. .++||||++|+.- |. +.+ ...++||||+|+||++.+.- -++. ++..+++....+.|+ |..
T Consensus 132 ~~~~~~aLVV~sDia~---y~--~~~---~~~t~GaGAvAmLv~~~~~~----~~~~-~~~~~~~~~~~DF~r----P~~ 194 (454)
T TIGR01833 132 SWDGRYALVVAGDIAV---YA--KGN---ARPTGGAGAVAMLIGPNAPI----VFER-GLRGSHMQHAYDFYK----PDL 194 (454)
T ss_pred CcCCCeEEEEEecccc---cc--CCC---eeeccccceEEEEeccCccc----eecC-ccceEEEeecccccC----CCC
Confidence 5 6999999999932 21 222 23478999999999976641 0111 011122222222332 211
Q ss_pred -C-CCceeeeechhHHHHHHHHhhhhhhhcCCCccchhHHHHHHHHHHHHhhhccccCCc---ccchhccccEEEeccCC
Q 011007 320 -K-EGKVGISLSKDLMAIAGEALKSNITTIGPLVLPASEQLLFLMTLIGRKIFNPKWKPY---IPDFKQAFEHFCIHAGG 394 (496)
Q Consensus 320 -~-~G~~g~~ls~d~~~v~g~~l~~~i~~~gp~vlp~~e~~~~~~~~~~~~v~~~~~~~~---~p~~~~did~f~~H~~~ 394 (496)
. .-.+.-.+|-+ ..-+++.. -+.-|. ++ ...+++.. -....+|||++|+|++.
T Consensus 195 ~~~~p~vdg~~S~~---~Yl~a~~~--------------~y~~y~----~~-~~~a~~~~~~~~~~~~~dfd~~~fH~P~ 252 (454)
T TIGR01833 195 ASEYPVVDGKLSIQ---CYLSALDR--------------CYKSYC----KK-IEKQWGKSGGDRKFTLNDFDYMVFHSPY 252 (454)
T ss_pred CCcccccCCccCHH---HHHHHHHH--------------HHHHHH----HH-HHHhhhhhccccCCCHhHcCEEeccCCc
Confidence 0 00000011111 00011110 000010 11 11111110 01124899999999997
Q ss_pred HHHHHHH-HHHc---------------------------------------------CCChhhHhhhhhhhcccCCccCC
Q 011007 395 RAVIDEL-QKNL---------------------------------------------QLSAEHVEASRMTLHRFGNTSSS 428 (496)
Q Consensus 395 ~~v~~~i-~~~L---------------------------------------------gl~~e~~~~S~~~l~r~GNtsSa 428 (496)
.++..+. .+.+ +...+|++||...-.+.||+.++
T Consensus 253 ~km~~ka~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kv~ps~~~~~~vGN~Yta 332 (454)
T TIGR01833 253 CKLVQKSLARLLYNDFLRNPSSIDTALYEGLEALSTLKLEDTYFDRDLEKAFMKASKELFDKKTKPSLLVPNQVGNMYTA 332 (454)
T ss_pred ccHHHHHHHHHHHhhhhhccccccchhhcccchhhccccccccchhhHHHHHHhhhhhhHHHhhcchhHHHHhcCchhhh
Confidence 6665553 2222 11236788887777799999999
Q ss_pred chHHHHHHHHHhCC--CCCCCEEEEEeechhHhhhheeeEeecc
Q 011007 429 SLWYEMSYIEEKGR--MKKGDRVWQIAFGSGFKCNSAVWKCNKT 470 (496)
Q Consensus 429 Si~~~La~~~~~g~--i~~Gd~Vll~~fG~G~~~~sav~r~~~~ 470 (496)
|+++.|..+++..+ ...|+||.|++||||........+....
T Consensus 333 Slyl~L~Sll~~~~~~~~~g~ri~~fSYGSG~~se~fs~~v~~~ 376 (454)
T TIGR01833 333 SLYGCLASLLSSKSAQELAGKRVGMFSYGSGLAASMFSLRVSQD 376 (454)
T ss_pred HHHHHHHHHHhhCCccccCCCEEEEEeccCCcceeeEEEEEeCC
Confidence 99999999997543 4579999999999998777777666543
No 35
>COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism]
Probab=99.98 E-value=2.4e-31 Score=269.73 Aligned_cols=309 Identities=17% Similarity=0.250 Sum_probs=236.5
Q ss_pred ceEEEEeeeecCCCCcccChHHHHHHHhhhhcCCcchHHHHHHHHHHcCCCceeecCCCCcCCCCCCchHHHHHhHHHHH
Q 011007 87 HVYLVDYACYKPPVTCRVPFATFMEHSRLILKNNPKSVEFQMRILERSGLGEETCLPPAIHYIPPTPTMEAARGEAELVI 166 (496)
Q Consensus 87 ~v~Iv~~~~y~P~~~~~v~~~~~~e~~~~~~~~~~~~~~f~~~i~~~sGi~~r~~~~~~~~~~~~~~~~~~~~~ea~~la 166 (496)
.++|++++.|.|. ++|+.+++.+..+. +++ ++...+|++++.+.+.+| ++..|+
T Consensus 2 ~iGI~~~g~y~p~--~~i~~~ela~~~g~----d~~------k~~~gl~~~e~sv~~~~E--------------D~vTma 55 (377)
T COG3425 2 MIGIVGIGAYIPR--YRIKLEELARAWGV----DPE------KIKKGLGVEEKSVPPWDE--------------DAVTMA 55 (377)
T ss_pred ccccceEEEeccc--eEeeHHHHHhhcCC----ChH------HhhhccccccccCCCCch--------------hHHHHH
Confidence 5889999999999 99999999988663 443 688889999999988876 478999
Q ss_pred HHHHHHHHHHcCCCcCCcCEEEeec-cCCCCCCcHHHHHHHHcCCCCCceeeEecCCCcchHHHHHHHHHHHHhcCCCCE
Q 011007 167 FSAMDSLLQKTGLKPKDIDILIVNC-SLFSPTPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLLQVHPNSN 245 (496)
Q Consensus 167 ~~Aa~~aL~~agi~p~dID~LI~~s-s~~~~~Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL~~~~~~~ 245 (496)
++||+++|++.+++|++|++|+++| |..+...+.|..|++.||+.+++.++|+. .+|-++..||+.|.+++.+++.++
T Consensus 56 veAA~~~l~r~~~D~~~Ig~v~vgTES~~d~~K~~at~v~~~lg~~~~~~~~d~~-~AC~agT~aL~~a~~~v~s~~~~~ 134 (377)
T COG3425 56 VEAARNALKRADIDPSKIGAVIVGSESGPDAVKPTATIVAEALGLNPSARAADVE-FACYAGTAALQAAIGWVESGMISY 134 (377)
T ss_pred HHHHHHHHhccCCCHHHCceEEEecCCCcccccchHHHHHHHhCCCCceehhhHH-HHHHHHHHHHHHHHHHHHcCCccc
Confidence 9999999999999999999999998 55678899999999999999999999999 499999999999999999999999
Q ss_pred EEEEEECCCCCCCccCCCccccccccccccccEEEEEeccCCcccccceeEeeEEEEEecCCcccccceeecccCCCcee
Q 011007 246 AVVVSTEIITPNYYQGNERAMLLPNCLFRMGGAAILLSNRRRNRSRAKYRLVHVVRTHKGADDKAYRCVFEEEDKEGKVG 325 (496)
Q Consensus 246 aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAaA~lLs~~~~~~~~~~~~L~~~~~t~~~~d~~~~~~~~~~~d~~G~~g 325 (496)
+|||++|+.-. ...+. .....|+||+|+|++..+.. ...+.... ++ .+|- ++ .+++++.
T Consensus 135 ~LvI~sD~a~~---~~~~~----~E~t~GAGavA~lIg~n~~~----~a~~~~~~-sy-t~d~--~D-FwRp~~~----- 193 (377)
T COG3425 135 GLVIGADTAQY---APGDA----LEYTAGAGAVAFLIGKNPPI----VAEFEGTG-SY-TTDT--PD-FWRPDGQ----- 193 (377)
T ss_pred eEEEeehhhcc---CCCcc----cCccCCCceEEEEEccCCCe----EEEecCce-EE-ecCC--Cc-ccccCCC-----
Confidence 99999998542 22222 23579999999999986432 11221111 11 1121 11 2333321
Q ss_pred eeechhHHHHHHHHhhhhhhhcCCCccchhHHHHHHHHH---HHHhhhcc-ccCCcccchhccccEEEeccCCHHHHHHH
Q 011007 326 ISLSKDLMAIAGEALKSNITTIGPLVLPASEQLLFLMTL---IGRKIFNP-KWKPYIPDFKQAFEHFCIHAGGRAVIDEL 401 (496)
Q Consensus 326 ~~ls~d~~~v~g~~l~~~i~~~gp~vlp~~e~~~~~~~~---~~~~v~~~-~~~~~~p~~~~did~f~~H~~~~~v~~~i 401 (496)
.-|.+.|+ ++++ .|+.- ..++.+++ .++ .+|||++|+|+++.++-...
T Consensus 194 -----~yp~~dg~---------------~s~~--~Y~~~~~~a~~~~~~k~gls------~~dfdy~vfH~P~~k~~~ka 245 (377)
T COG3425 194 -----PYPYVDGR---------------FSEP--AYFKHVENAAKGYMEKTGLS------PDDFDYIVFHQPNGKFPKKA 245 (377)
T ss_pred -----cccccCce---------------ecHH--HHHHHHHHHHHHHHHHhCCC------hhhhCeEEecCCCCchHHHH
Confidence 01111111 1111 01111 12233322 222 48999999999999999999
Q ss_pred HHHcCCChhhHhhhhhhhcccCCccCCchHHHHHHHHHhCCCCCCCEEEEEeechhHhhhheeeEeeccCC
Q 011007 402 QKNLQLSAEHVEASRMTLHRFGNTSSSSLWYEMSYIEEKGRMKKGDRVWQIAFGSGFKCNSAVWKCNKTIK 472 (496)
Q Consensus 402 ~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~i~~Gd~Vll~~fG~G~~~~sav~r~~~~~~ 472 (496)
++.++.+.+++.|+.....+.||+.|+|+++.|+.+++..+ .+||||++.+||+|......-......+.
T Consensus 246 ~k~l~~~~e~v~~~l~~~~~vGN~YtgS~~L~Las~L~~a~-~~G~rIl~~SYGSGa~s~~fs~~v~~~~~ 315 (377)
T COG3425 246 AKSLGFKEEQVKPGLVYPQRIGNTYTGSLLLGLASLLDNAK-LPGDRILLFSYGSGAGSEAFSITVTDGIE 315 (377)
T ss_pred HHHhCccHhhcCccchhhhhcCcccchhHHHHHHHHHhhcC-CCCCEEEEEeeCCCcceeEEEEEecccHH
Confidence 99999999999999988889999999999999999998766 79999999999999766665555555443
No 36
>PF00195 Chal_sti_synt_N: Chalcone and stilbene synthases, N-terminal domain; InterPro: IPR001099 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2.3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyse the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group [].; GO: 0016746 transferase activity, transferring acyl groups, 0009058 biosynthetic process; PDB: 3EUO_B 3EUT_C 3EUQ_D 3E1H_A 3AWK_A 3AWJ_A 2H84_A 3A5S_A 3A5Q_B 3A5R_A ....
Probab=99.97 E-value=7e-32 Score=259.60 Aligned_cols=203 Identities=24% Similarity=0.361 Sum_probs=162.4
Q ss_pred hcCCCceEEEEeeeecCCCCcccChHHHHHHHhhhhcCCc--chHHHHHHHHHHcCCCceeecCCCCc-------CCCCC
Q 011007 82 MSKPRHVYLVDYACYKPPVTCRVPFATFMEHSRLILKNNP--KSVEFQMRILERSGLGEETCLPPAIH-------YIPPT 152 (496)
Q Consensus 82 ~~~~~~v~Iv~~~~y~P~~~~~v~~~~~~e~~~~~~~~~~--~~~~f~~~i~~~sGi~~r~~~~~~~~-------~~~~~ 152 (496)
.+.+.+.+|+++|+..|+ ++++++++.+.+......++ +..+++++|++++||++|+..-+.++ .....
T Consensus 9 ~~~~g~A~Il~IgTA~P~--~~~~Q~~~~e~~~~~~~~~~~~~~~~~l~ri~~~sgI~~R~~vl~~~~~~~~p~~~~~~~ 86 (226)
T PF00195_consen 9 QRSPGPAYILSIGTAVPP--HRITQEEIAEFFFRITHSDDLPDLRRKLRRIFENSGIEKRHSVLPEEWLDEYPSFWDFAD 86 (226)
T ss_dssp HS-SSSEEEEEEEEE-SS--EEEEGCCHHHHHHHHTT-TTGHHHHHHHHHHHHHST-SEEEESS-HHHHHTSGGGHSSSS
T ss_pred ccCCCCeEEEEEEEeCCC--ceecHHHHHHHHHHHhcccchhHHHHHHHhhhhccccceeccccchhhhhcCcchhhccC
Confidence 456778999999999999 99999999987543222232 34578899999999999997643211 01112
Q ss_pred ----CchHHHHHhHHHHHHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCCceeeEecCCCcchHH
Q 011007 153 ----PTMEAARGEAELVIFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSNIKSFNLSGMGCSAGL 228 (496)
Q Consensus 153 ----~~~~~~~~ea~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l 228 (496)
..++.+.+++.+|+.+|++++|+++|++++|||+||++|+++...|++..+|+++|||++++..+.|+||||.||+
T Consensus 87 ps~~~R~~~~~~~a~~L~~~Aa~~AL~~~g~~~~dIthlv~vs~TG~~~PglD~~l~~~LgL~~~v~R~~i~~~GC~gg~ 166 (226)
T PF00195_consen 87 PSLAERNALYAEEAPPLAEEAARKALAEAGLDPSDITHLVTVSCTGIAAPGLDARLINRLGLRPDVQRTPIFGMGCAGGA 166 (226)
T ss_dssp S-HHHHHHHHHHHHHHHHHHHHHHHHHHHTS-GGGECEEEEEESSSSECS-HHHHHHHHHT--TTSEEEEEES-GGGHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcccceEEEEecCCcCCCchhHHHHhcCCCCCCcEEEEEeccchhhHH
Confidence 2466789999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCEEEEEEECCCCCCCccCC--CccccccccccccccEEEEEeccC
Q 011007 229 ISIDLARDLLQVHPNSNAVVVSTEIITPNYYQGN--ERAMLLPNCLFRMGGAAILLSNRR 286 (496)
Q Consensus 229 ~al~lA~~lL~~~~~~~aLVVs~E~~s~~~~~~~--dr~~l~~~~lfgDGAaA~lLs~~~ 286 (496)
.||.+|+++.+++|..+||||+.|.+|.++..++ +++.++.++||||||||+||+.+|
T Consensus 167 ~~L~~A~~~~~~~p~a~VLvv~vElcsl~~~~~~~~~~~~lv~~aLFgDGaAA~vv~~dP 226 (226)
T PF00195_consen 167 AGLRRAKDIARANPGARVLVVCVELCSLHFQAPNDDSLDNLVANALFGDGAAAVVVGADP 226 (226)
T ss_dssp HHHHHHHHHHHHSTT-EEEEEEEEEGGGTHHHCCTTSHHHHHHHHHB-EEEEEEEEESS-
T ss_pred HHHHHHHHHHhCCccceEEEEEEEeeEEEEecCCcccHHHHhHHhhhcCCceEEEEccCC
Confidence 9999999999999999999999999998775433 356788999999999999999764
No 37
>cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction. Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products.
Probab=99.95 E-value=6.2e-28 Score=237.24 Aligned_cols=237 Identities=19% Similarity=0.197 Sum_probs=182.4
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEeecc-CCCCCCcHHHHHHHHcCCCCCceeeEecCCCcchHHHHHHHHHHHHhc
Q 011007 162 AELVIFSAMDSLLQKTGLKPKDIDILIVNCS-LFSPTPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLLQV 240 (496)
Q Consensus 162 a~~la~~Aa~~aL~~agi~p~dID~LI~~ss-~~~~~Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL~~ 240 (496)
..+|+.+|++++|+++|++++|||.||++++ +++..|+.+.+|++++|++ +..+++++ .+|++++.||++|.++|++
T Consensus 7 ~~~l~~~A~~~al~~ag~~~~~i~~li~~~~~~~~~~~~~a~~i~~~lg~~-~~~~~~i~-~~C~s~~~al~~A~~~i~~ 84 (254)
T cd00327 7 ASELGFEAAEQAIADAGLSKGPIVGVIVGTTGGSGEFSGAAGQLAYHLGIS-GGPAYSVN-QACATGLTALALAVQQVQN 84 (254)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCceEEEEEECCCCccccHHHHHHHHHhCCC-CCCcceec-cHhHHHHHHHHHHHHHHHC
Confidence 6789999999999999999999999999975 5666899999999999998 78999999 6999999999999999999
Q ss_pred CCCCEEEEEEECCCCCCCccCCCccccccccccccccEEEEEeccCCcccccceeEeeEEEEEecCCcccccceeecccC
Q 011007 241 HPNSNAVVVSTEIITPNYYQGNERAMLLPNCLFRMGGAAILLSNRRRNRSRAKYRLVHVVRTHKGADDKAYRCVFEEEDK 320 (496)
Q Consensus 241 ~~~~~aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAaA~lLs~~~~~~~~~~~~L~~~~~t~~~~d~~~~~~~~~~~d~ 320 (496)
+..+++||+++|. ++|||||+|+||++.+...++....+..+.......++..+.
T Consensus 85 g~~~~~lv~~~e~-----------------~~~gdGAaa~vL~~~~~a~~~~~~~~~~i~~~~~~~~~~~~~-------- 139 (254)
T cd00327 85 GKADIVLAGGSEE-----------------FVFGDGAAAAVVESEEHALRRGAHPQAEIVSTAATFDGASMV-------- 139 (254)
T ss_pred CCCCEEEEEecce-----------------eeecceEEEEEECcHHHHHHCCCceEEEEEEEEEcCCCCCCC--------
Confidence 9999999999998 589999999999986532111100011122222222221100
Q ss_pred CCceeeeechhHHHHHHHHhhhhhhhcCCCccchhHHHHHHHHHHHHhhhcc-ccCCcccchhccccEEEeccCCHHHHH
Q 011007 321 EGKVGISLSKDLMAIAGEALKSNITTIGPLVLPASEQLLFLMTLIGRKIFNP-KWKPYIPDFKQAFEHFCIHAGGRAVID 399 (496)
Q Consensus 321 ~G~~g~~ls~d~~~v~g~~l~~~i~~~gp~vlp~~e~~~~~~~~~~~~v~~~-~~~~~~p~~~~did~f~~H~~~~~v~~ 399 (496)
.... .+.+ ....++.+++ .+. ++|+|+|++|+.+..+.+
T Consensus 140 -----~~~~-------~~~~----------------------~~~i~~~l~~ag~~------~~did~~~~h~~~~~~~~ 179 (254)
T cd00327 140 -----PAVS-------GEGL----------------------ARAARKALEGAGLT------PSDIDYVEAHGTGTPIGD 179 (254)
T ss_pred -----CCCC-------hHHH----------------------HHHHHHHHHHcCCC------HHHCCEEEccCCcCcccc
Confidence 0000 0000 0111333332 222 489999999999999999
Q ss_pred HHHHHcCCChhhHh--hhhhhhcccCCccCCchHHHHHHHHHhCCCC-------CCCEEEEEeechhHhhhheee
Q 011007 400 ELQKNLQLSAEHVE--ASRMTLHRFGNTSSSSLWYEMSYIEEKGRMK-------KGDRVWQIAFGSGFKCNSAVW 465 (496)
Q Consensus 400 ~i~~~Lgl~~e~~~--~S~~~l~r~GNtsSaSi~~~La~~~~~g~i~-------~Gd~Vll~~fG~G~~~~sav~ 465 (496)
.+++.+++++++.. +...+..+|||++++|.++.|..+.+..+.+ +||++++.++|.|++++++++
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~as~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~g~Gg~~~~~~l 254 (254)
T cd00327 180 AVELALGLDPDGVRSPAVSATLIMTGHPLGAAGLAILDELLLMLEHEFIPPTPREPRTVLLLGFGLGGTNAAVVL 254 (254)
T ss_pred HHHHHHHHHHhCCCCCceeccccccccchHHHHHHHHHHHHHHHhCCCcCCCCCCcCEEEEeeEcCCCcceEEEC
Confidence 99999999887763 3457889999999999999999998876665 899999999999999998875
No 38
>cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction. Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units).
Probab=99.93 E-value=2.5e-25 Score=227.39 Aligned_cols=251 Identities=17% Similarity=0.156 Sum_probs=181.7
Q ss_pred HHHHHHHHHHHHHHHcCCC----cCCcCEEEeeccC-CCC---------------------CCcHHHHHHHHcCCCCCce
Q 011007 162 AELVIFSAMDSLLQKTGLK----PKDIDILIVNCSL-FSP---------------------TPSLSAMVINKYKLRSNIK 215 (496)
Q Consensus 162 a~~la~~Aa~~aL~~agi~----p~dID~LI~~ss~-~~~---------------------~Ps~a~~I~~~Lgl~~~~~ 215 (496)
..+|+..|++++|+++|++ +++||.||++++. ++. .|+.+.+|+..||+ +.+
T Consensus 11 ~~~l~~~aa~~aL~~Ag~~~~~~~~~i~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl--~g~ 88 (332)
T cd00825 11 VSILGFEAAERAIADAGLSREYQKNPIVGVVVGTGGGSPRFQVFGADAMRAVGPYVVTKAMFPGASGQIATPLGI--HGP 88 (332)
T ss_pred HHHHHHHHHHHHHHHcCCCccccCCCCEEEEEEeCCccHHHHhhhhccccccCcchhhcccchHHHHHHHHHhCC--CCC
Confidence 4679999999999999999 9999999988754 332 78899999999999 468
Q ss_pred eeEecCCCcchHHHHHHHHHHHHhcCCCCEEEEEEECCCCCCCccC----------C--Cc--cccccccccccccEEEE
Q 011007 216 SFNLSGMGCSAGLISIDLARDLLQVHPNSNAVVVSTEIITPNYYQG----------N--ER--AMLLPNCLFRMGGAAIL 281 (496)
Q Consensus 216 ~~dl~g~gCsg~l~al~lA~~lL~~~~~~~aLVVs~E~~s~~~~~~----------~--dr--~~l~~~~lfgDGAaA~l 281 (496)
+++++ ++|++++.||++|.++|++++.+++||+++|..+..+... + .+ +.....++|||||+|+|
T Consensus 89 ~~~v~-~~cas~~~al~~A~~~i~~g~~~~~Lv~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gdGaaA~v 167 (332)
T cd00825 89 AYDVS-AACAGSLHALSLAADAVQNGKQDIVLAGGSEELAAPMDCEFDAMGALSTPEKASRTFDAAADGFVFGDGAGALV 167 (332)
T ss_pred ccccc-cHhHHHHHHHHHHHHHHHcCCCCEEEEeccccccCHHHHHHHhhccccCCCCCCCCCCCCCCCEEEEeeEEEEE
Confidence 99999 6999999999999999999999999999999877532110 0 00 11124789999999999
Q ss_pred EeccCCcccc---cceeEeeEEEEEecCCcccccceeecccCCCceeeeechhHHHHHHHHhhhhhhhcCCCccchhHHH
Q 011007 282 LSNRRRNRSR---AKYRLVHVVRTHKGADDKAYRCVFEEEDKEGKVGISLSKDLMAIAGEALKSNITTIGPLVLPASEQL 358 (496)
Q Consensus 282 Ls~~~~~~~~---~~~~L~~~~~t~~~~d~~~~~~~~~~~d~~G~~g~~ls~d~~~v~g~~l~~~i~~~gp~vlp~~e~~ 358 (496)
|++.+....+ ...++.+ +....++..... +. .. ++.
T Consensus 168 L~~~~~a~~~~~~~~~~i~~---~~~~~~~~~~~~-~~-------------~~-----~~~------------------- 206 (332)
T cd00825 168 VEELEHALARGAHIYAEIVG---TAATIDGAGMGA-FA-------------PS-----AEG------------------- 206 (332)
T ss_pred ECcHHHHHHCCCeEEEEEEE---EEEccCCCCCCC-CC-------------cC-----HHH-------------------
Confidence 9976542111 1122222 222222211100 00 00 000
Q ss_pred HHHHHHHHHhhhcc-ccCCcccchhccccEEEeccCCHHHHHHHHHHcCCChhhH--hhhhhhhcccCCccCCchHHHHH
Q 011007 359 LFLMTLIGRKIFNP-KWKPYIPDFKQAFEHFCIHAGGRAVIDELQKNLQLSAEHV--EASRMTLHRFGNTSSSSLWYEMS 435 (496)
Q Consensus 359 ~~~~~~~~~~v~~~-~~~~~~p~~~~did~f~~H~~~~~v~~~i~~~Lgl~~e~~--~~S~~~l~r~GNtsSaSi~~~La 435 (496)
.. ...+++++. .+. .+|||++++|+.|+.+.+.+++.++++.++. .+...+..+|||++++|.++.|.
T Consensus 207 --~~-~~i~~al~~agl~------~~did~~~~h~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~G~~~aas~~~~l~ 277 (332)
T cd00825 207 --LA-RAAKEALAVAGLT------VWDIDYLVAHGTGTPIGDVKELKLLRSEFGDKSPAVSATKAMTGNLSSAAVVLAVD 277 (332)
T ss_pred --HH-HHHHHHHHHcCCC------HhHCCEEEccCCCCCCCCHHHHHHHHHHhCCCCceeECCCcccccchhHhHHHHHH
Confidence 00 111333332 232 4899999999999999999999988876642 12357889999999999999999
Q ss_pred HHHHhCCCC-------------------------CCCEEEEEeechhHhhhheee
Q 011007 436 YIEEKGRMK-------------------------KGDRVWQIAFGSGFKCNSAVW 465 (496)
Q Consensus 436 ~~~~~g~i~-------------------------~Gd~Vll~~fG~G~~~~sav~ 465 (496)
.+.+..+.+ +|++++++++|.|.+++++|+
T Consensus 278 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~G~Gg~~~~~vl 332 (332)
T cd00825 278 EAVLMLEHGFIPPSIHIEELDEAGLNIVTETTPRELRTALLNGFGLGGTNATLVL 332 (332)
T ss_pred HHHHHHhcCccCCCCCCCCCCcccCcccCCCCCCCCCEEEEeeecCCCeeEEEeC
Confidence 998766655 889999999999999998874
No 39
>PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2.3.1.41 from EC, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008610 lipid biosynthetic process; PDB: 3IL3_A 1ZOW_C 3GWE_B 3GWA_B 1UB7_B 3LED_B 2EBD_A 1HNJ_A 2EFT_B 1HN9_B ....
Probab=99.79 E-value=7.9e-20 Score=152.44 Aligned_cols=83 Identities=33% Similarity=0.590 Sum_probs=75.1
Q ss_pred hccccEEEeccCCHHHHHHHHHHcCCChhhHhhhhhhhcccCCccCCchHHHHHHHHHhCCCCCCCEEEEEeechhHhhh
Q 011007 382 KQAFEHFCIHAGGRAVIDELQKNLQLSAEHVEASRMTLHRFGNTSSSSLWYEMSYIEEKGRMKKGDRVWQIAFGSGFKCN 461 (496)
Q Consensus 382 ~~did~f~~H~~~~~v~~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~i~~Gd~Vll~~fG~G~~~~ 461 (496)
.+|||+|++||.|+++++.+.+.+|++++++ ..++++||||+|+|+|++|+++.++|++++||+|+++++|+|++|+
T Consensus 8 ~~did~~i~hq~~~~~~~~~~~~lgi~~~~~---~~~~~~~Gn~~sa~~~~~L~~~~~~g~~~~Gd~vl~~~~G~G~~~~ 84 (90)
T PF08541_consen 8 PDDIDHFIPHQASKKILDSIAKRLGIPPERF---PDNLAEYGNTGSASIPINLADALEEGRIKPGDRVLLVGFGAGFSWG 84 (90)
T ss_dssp GGGESEEEE-SSSHHHHHHHHHHHTS-GGGB---E-THHHH-B-GGGHHHHHHHHHHHTTSSCTTEEEEEEEEETTTEEE
T ss_pred HHHCCEEEeCCCCHHHHHHHHHHcCCcHHHH---HHHHhccCcchhhhHHHHHHHHHHcCCCCCCCEEEEEEEEhhheeE
Confidence 4899999999999999999999999999998 6799999999999999999999999999999999999999999999
Q ss_pred heeeEe
Q 011007 462 SAVWKC 467 (496)
Q Consensus 462 sav~r~ 467 (496)
+++|||
T Consensus 85 ~~~~~~ 90 (90)
T PF08541_consen 85 AAVLRW 90 (90)
T ss_dssp EEEEE-
T ss_pred EEEEEC
Confidence 999997
No 40
>PF02797 Chal_sti_synt_C: Chalcone and stilbene synthases, C-terminal domain; InterPro: IPR012328 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2.3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyze the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group []. This domain of chalcone synthase is reported to be structurally similar to domains in thiolase and beta-ketoacyl synthase. The differences in activity are accounted for by differences in the N-terminal domain. ; GO: 0016746 transferase activity, transferring acyl groups; PDB: 3OV2_A 3OV3_B 1Z1F_A 1Z1E_A 3ALE_C 3OIT_A 2H84_A 1TEE_D 1TED_A 2P0U_A ....
Probab=99.79 E-value=5.6e-19 Score=161.07 Aligned_cols=119 Identities=23% Similarity=0.436 Sum_probs=90.9
Q ss_pred CceeeeechhHHHHHHHHhhhhhhhcCCCccchhHHHHHHHHHHHHhhhc-cccCCcccchhccccEEEeccCCHHHHHH
Q 011007 322 GKVGISLSKDLMAIAGEALKSNITTIGPLVLPASEQLLFLMTLIGRKIFN-PKWKPYIPDFKQAFEHFCIHAGGRAVIDE 400 (496)
Q Consensus 322 G~~g~~ls~d~~~v~g~~l~~~i~~~gp~vlp~~e~~~~~~~~~~~~v~~-~~~~~~~p~~~~did~f~~H~~~~~v~~~ 400 (496)
.++.+.|++++|.+.++.++..++ ++++ ..++ + .++.+|++|+||++|++.
T Consensus 24 ~Gf~~~Ls~~vP~~i~~~i~~~~~----------------------~~L~~~g~~----~--~~~~~wavHPGG~~ILd~ 75 (151)
T PF02797_consen 24 TGFHFILSKEVPDLISDNIPPFVE----------------------DLLARHGLS----D--WDILFWAVHPGGRKILDA 75 (151)
T ss_dssp TEEEEEE-TTHHHHHHHHHHHHHH----------------------HHHHGGTCC----S--GGGSEEEEE-SSHHHHHH
T ss_pred CeEEEEEhhHhHHHHHHHHHHHHH----------------------HHHhhhccc----c--cccceeeecCChHHHHHH
Confidence 347889999999987754433221 2222 1222 1 355689999999999999
Q ss_pred HHHHcCCChhhHhhhhhhhcccCCccCCchHHHHHHHHH----hCCCCC---CCEEEEEeechhHhhhheeeEee
Q 011007 401 LQKNLQLSAEHVEASRMTLHRFGNTSSSSLWYEMSYIEE----KGRMKK---GDRVWQIAFGSGFKCNSAVWKCN 468 (496)
Q Consensus 401 i~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~----~g~i~~---Gd~Vll~~fG~G~~~~sav~r~~ 468 (496)
+++.|||+++++.+|+++|++||||||+++++.|+++.+ +|.... +|+++++|||+|++..++++|.+
T Consensus 76 v~~~L~L~~~~l~~Sr~vLr~yGNmSSaTVlfVL~~~~~~~~~~g~~~~~~g~~~gv~~afGPG~t~E~~lLr~~ 150 (151)
T PF02797_consen 76 VEEALGLSPEQLRASREVLREYGNMSSATVLFVLERMRRKSAEEGAPPPGEGGEWGVMLAFGPGLTIEGMLLRSV 150 (151)
T ss_dssp HHHHHTS-GGGGHHHHHHHHHH-B-GGGHHHHHHHHHHHHHHHTTTSBTTTTBSEEEEEEEETTTEEEEEEEEE-
T ss_pred HHHHcCCCHHHHHHHHHHHHhcCCCCCcchHHHHHHHHhhhhhhcccCCCCCCCeEEEEEECCcceEeeEEEeeC
Confidence 999999999999999999999999999999999999887 344333 48999999999999999999975
No 41
>PF01154 HMG_CoA_synt_N: Hydroxymethylglutaryl-coenzyme A synthase N terminal; InterPro: IPR013528 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase. Hydroxymethylglutaryl-CoA synthase (2.3.3.10 from EC) catalyses the condensation of acetyl-CoA with acetoacetyl-CoA to produce HMG-CoA and CoA, the second reaction in the mevalonate-dependent isoprenoid biosynthesis pathway. HMG-CoA synthase contains an important catalytic cysteine residue that acts as a nucleophile in the first step of the reaction: the acetylation of the enzyme by acetyl-CoA (its first substrate) to produce an acetyl-enzyme thioester, releasing the reduced coenzyme A. The subsequent nucleophilic attack on acetoacetyl-CoA (its second substrate) leads to the formation of HMG-CoA []. HMG-CoA synthase occurs in eukaryotes, archaea and certain bacteria []. In vertebrates, there are two isozymes located in different subcellular compartments: a cytosolic form that is the starting point of the mevalonate pathway (leads to cholesterol and other sterolic and isoprenoid compounds), and a mitochondrial form responsible for ketone body biosynthesis. HMG-CoA is also found in other eukaryotes such as insects, plants and fungi []. In bacteria, isoprenoid precursors are generally synthesised via an alternative, non-mevalonate pathway, however a number of Gram-positive pathogens utilise a mevalonate pathway involving HMG-CoA synthase that is parallel to that found in eukaryotes [, ]. This entry represents the N-terminal domain of HMG-CoA synthase enzymes from both eukaryotes and prokaryotes.; GO: 0004421 hydroxymethylglutaryl-CoA synthase activity, 0008299 isoprenoid biosynthetic process; PDB: 1X9E_B 2HDB_B 2WYA_C 2P8U_A 3V4X_A 3V4N_C 3LEH_A 1TXT_D 1TVZ_A 2FA0_A ....
Probab=99.79 E-value=5.8e-19 Score=162.57 Aligned_cols=168 Identities=21% Similarity=0.319 Sum_probs=127.7
Q ss_pred CCCceEEEEeeeecCCCCcccChHHHHHHHhhhhcCCcchHHHHHHHHHHcCCCceeecCCCCcCCCCCCchHHHHHhHH
Q 011007 84 KPRHVYLVDYACYKPPVTCRVPFATFMEHSRLILKNNPKSVEFQMRILERSGLGEETCLPPAIHYIPPTPTMEAARGEAE 163 (496)
Q Consensus 84 ~~~~v~Iv~~~~y~P~~~~~v~~~~~~e~~~~~~~~~~~~~~f~~~i~~~sGi~~r~~~~~~~~~~~~~~~~~~~~~ea~ 163 (496)
||++|+|.+++.|.|. ..++.+++.+..+. ++. |+....|.++..+.++.| ++.
T Consensus 1 ~p~~VGI~~i~~y~p~--~~v~~~~La~~~g~----d~~------K~~~glgq~~~av~~~~E--------------D~v 54 (174)
T PF01154_consen 1 RPQNVGIDAIEFYIPR--YYVDQEELAEARGV----DPG------KYTIGLGQEKMAVPPPDE--------------DIV 54 (174)
T ss_dssp --SSEEEEEEEEE-ES--EEEEHHHHHHHTTS-----TC------HHHTTT--SEEEE--TTS---------------HH
T ss_pred CCccccEeEEEEecCc--eEecHHHHHHHhCC----CHH------HhhhhcCeeEEEeCCCcc--------------cHH
Confidence 7899999999999999 99999999887653 444 455445555667777765 478
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEeecc-CCCCCCcHHHHHHHHcCC--CCCceeeEecCCCcchHHHHHHHHHHHHhc
Q 011007 164 LVIFSAMDSLLQKTGLKPKDIDILIVNCS-LFSPTPSLSAMVINKYKL--RSNIKSFNLSGMGCSAGLISIDLARDLLQV 240 (496)
Q Consensus 164 ~la~~Aa~~aL~~agi~p~dID~LI~~ss-~~~~~Ps~a~~I~~~Lgl--~~~~~~~dl~g~gCsg~l~al~lA~~lL~~ 240 (496)
.|+..|++++|++.+++|++|+.|+++|. ......+.+.+|++.||+ +.++..+|+. ++|.|+..||+.|.+++++
T Consensus 55 TmA~nAa~~ll~~~~id~~~Ig~l~vgTES~vD~sKs~~t~v~~ll~~s~~~~~~~~e~k-~ACygGTaAL~~a~~~v~s 133 (174)
T PF01154_consen 55 TMAANAAKPLLDRYNIDPDDIGRLIVGTESGVDKSKSISTYVHQLLGLSGNPDCRGVEMK-QACYGGTAALQNAVNWVAS 133 (174)
T ss_dssp HHHHHHHHTTHHHHT-HHHHEEEEEEE-SS-SBSSS-HHHHHHHHTTTTT-SSSEEEEEE-SGGGHHHHHHHHHHHHHCS
T ss_pred HHHHHHHHHHHHHcCCCHHHccEEEEeccccccccccHHHHHHHHhCcCCCCceeeeehh-hhhHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999984 445678899999999999 4578999999 5999999999999999999
Q ss_pred CC--CCEEEEEEECCCCCCCccCCCccccccccccccccEEEEEeccC
Q 011007 241 HP--NSNAVVVSTEIITPNYYQGNERAMLLPNCLFRMGGAAILLSNRR 286 (496)
Q Consensus 241 ~~--~~~aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAaA~lLs~~~ 286 (496)
++ ++++|||++|+.- |.... +...-|-||+|+|++...
T Consensus 134 ~~~~g~~aLVVasDiA~---y~~g~-----~e~TqGAGAVAmLi~~na 173 (174)
T PF01154_consen 134 SPWDGRKALVVASDIAR---YDLGS-----AEPTQGAGAVAMLIGPNA 173 (174)
T ss_dssp TTSTTEEEEEEEEEEE-----STTT-----TGGG-EEEEEEEEEECS-
T ss_pred CCCCCCeEEEEeccccc---cCCCC-----ccccccceeEEEEecCCC
Confidence 74 6899999999953 22221 235689999999999753
No 42
>PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated
Probab=99.71 E-value=2.8e-16 Score=162.73 Aligned_cols=309 Identities=13% Similarity=0.070 Sum_probs=193.2
Q ss_pred ceEEEEeeeecCCCCcccChHHHHHHHhh-hhcCCcchHHHH-----HHHHHHcCCCceeecCCCCcCCCCCCchHHHHH
Q 011007 87 HVYLVDYACYKPPVTCRVPFATFMEHSRL-ILKNNPKSVEFQ-----MRILERSGLGEETCLPPAIHYIPPTPTMEAARG 160 (496)
Q Consensus 87 ~v~Iv~~~~y~P~~~~~v~~~~~~e~~~~-~~~~~~~~~~f~-----~~i~~~sGi~~r~~~~~~~~~~~~~~~~~~~~~ 160 (496)
+++|++.++.-|=- .+.+.-...+.. ..++... .|+ ++|..++|+.+|++.. .+
T Consensus 4 ~v~I~~~g~vs~lG---~~~~~~~aa~ragi~~~~~~--~~~~~~~~~~i~~~~~~~~~~~~~---------------~~ 63 (348)
T PRK06147 4 ALAIVGSGMVTAVG---LDAPSSCAAIRARLDNFQET--RFIDPPGGEWLIGAPVPLPPPWRG---------------PE 63 (348)
T ss_pred ceEEEecceeecCc---CCHHHHHHHHHccccccccc--ccccCCCCCceEeecCcCCcccCc---------------hH
Confidence 69999999999863 233333332221 0111110 000 2455556665555421 12
Q ss_pred hHHHHHHHHHHHHHHHcC-CCcCCcCEEEeecc------CCCCCCcHHHHHHHHcCCCCCceeeEecCCCcchHHHHHHH
Q 011007 161 EAELVIFSAMDSLLQKTG-LKPKDIDILIVNCS------LFSPTPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDL 233 (496)
Q Consensus 161 ea~~la~~Aa~~aL~~ag-i~p~dID~LI~~ss------~~~~~Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~l 233 (496)
...+|+..|++++|++++ +++++||++|+.++ ++...|.++..+++++|+.....+++++ .||++++.||..
T Consensus 64 r~~~La~~Al~~aL~~a~~~~~~~i~lil~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~~~~~~~i~-~~casg~~Al~~ 142 (348)
T PRK06147 64 RLAEMAAPAIAEALEGLPALDASEAPLLLCVAEEERPGRPPDLEERLLRELEARLGLRLEPGSAVIA-RGRVSGAVALAQ 142 (348)
T ss_pred HHHHHHHHHHHHHHHhcccccccCCcEEEEeCchhcCCCCcchHHHHHHHHHHHhCCCCCCCccccc-ccchHHHHHHHH
Confidence 367899999999999999 79999999987643 2333456788999999996457789999 599999999999
Q ss_pred HHHHHhcCCCCEEEEEEECCCCCC----Ccc------CCCccccccccccccccEEEEEeccCCcccccceeEeeEEEEE
Q 011007 234 ARDLLQVHPNSNAVVVSTEIITPN----YYQ------GNERAMLLPNCLFRMGGAAILLSNRRRNRSRAKYRLVHVVRTH 303 (496)
Q Consensus 234 A~~lL~~~~~~~aLVVs~E~~s~~----~~~------~~dr~~l~~~~lfgDGAaA~lLs~~~~~~~~~~~~L~~~~~t~ 303 (496)
|.++|+.+..+.+||+++|.++.. ++. .+++. ...+|||||+++||++.+...++ +-++.. ..
T Consensus 143 A~~~i~~G~~~~~lvgg~d~~~~~~~~~~~~~~~~l~~~~~~---~G~v~GEGA~a~vLe~~~~A~~r-ga~i~a---~g 215 (348)
T PRK06147 143 ARRLIAAGGCPRVLVAGVDSLLTGPTLAHYEARDRLLTSQNS---NGFIPGEAAAAVLLGRPAGGEAP-GLPLLG---LG 215 (348)
T ss_pred HHHHHHcCCCCEEEEEeeccccCHHHHHHHHHhhccCCCCCC---CceeeeceEEEEEEccHhhhhcC-CCceEE---EE
Confidence 999999999999999999987641 110 12222 36799999999999976542211 122222 11
Q ss_pred ecCCcccccceeecccCCCceeeeechhHHHHHHHHhhhhhhhcCCCccchhHHHHHHHHHHHHhhhcc-ccCCcccchh
Q 011007 304 KGADDKAYRCVFEEEDKEGKVGISLSKDLMAIAGEALKSNITTIGPLVLPASEQLLFLMTLIGRKIFNP-KWKPYIPDFK 382 (496)
Q Consensus 304 ~~~d~~~~~~~~~~~d~~G~~g~~ls~d~~~v~g~~l~~~i~~~gp~vlp~~e~~~~~~~~~~~~v~~~-~~~~~~p~~~ 382 (496)
.+.+...+. . +.+.|. .++.+. ...++.++. .+. .
T Consensus 216 ~~~~~~~~~---~------------~~~~p~-~g~gl~----------------------~ai~~AL~~agl~------~ 251 (348)
T PRK06147 216 LGREPAPVG---E------------SEDLPL-RGDGLT----------------------QAIRAALAEAGCG------L 251 (348)
T ss_pred EeecCCCcc---c------------CCCCCC-ChHHHH----------------------HHHHHHHHHcCCC------H
Confidence 122211110 0 000000 011000 011233332 232 4
Q ss_pred ccccEEEeccCCHHHHHHH-----HHHcCCChhhHhhhhhhhcccCCccCCchHHHHHHHH---HhCCCCCCCEEEEEee
Q 011007 383 QAFEHFCIHAGGRAVIDEL-----QKNLQLSAEHVEASRMTLHRFGNTSSSSLWYEMSYIE---EKGRMKKGDRVWQIAF 454 (496)
Q Consensus 383 ~did~f~~H~~~~~v~~~i-----~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~---~~g~i~~Gd~Vll~~f 454 (496)
+|||+++.|..|....+.. .+.++-..+... -+.+-..+||+++++-.+++.... ++| .-+|+++++++-
T Consensus 252 ~dId~v~ah~~gt~~~d~~e~~A~~~~f~~~~~~~~-~~~~k~~~Gh~~aAaG~~~~~~a~~~~~~g-~~~g~~~L~~s~ 329 (348)
T PRK06147 252 EDMDYRIADLNGEQYRFKEAALAEMRLFRVRKEFFD-LWHPAECIGEIGAAIGPALLGVALAASRKG-YGPGPNVLCHLS 329 (348)
T ss_pred HHCCEEEcCCCCCccchHHHHHHHHHHhhhccCCCc-eecchHhhcchHHHHHHHHHHHHHHHHHcC-cCCCCcEEEEec
Confidence 8999999999876554333 334543222211 134567799999999999988644 344 457999999999
Q ss_pred chhHhhhheeeEeec
Q 011007 455 GSGFKCNSAVWKCNK 469 (496)
Q Consensus 455 G~G~~~~sav~r~~~ 469 (496)
.-.-..++++++..+
T Consensus 330 ~d~g~r~a~~l~~~~ 344 (348)
T PRK06147 330 DDDGARAALVLEYRR 344 (348)
T ss_pred CCCCceEEEEEeccc
Confidence 887778999988654
No 43
>TIGR02845 spore_V_AD stage V sporulation protein AD. Bacillus and Clostridium species contain about 10 % dipicolinic acid (pyridine-2,6-dicarboxylic acid) by weight. This protein family, SpoVAD, belongs to the spoVA operon that is suggested to act in the transport of dipicolinic acid (DPA) from the mother cell, where DPA is synthesized, to the forespore, a process essential to sporulation. Members of this protein family are found, so far, in exactly those species believed capable of endospore formation.
Probab=99.70 E-value=1.2e-15 Score=153.13 Aligned_cols=116 Identities=17% Similarity=0.260 Sum_probs=98.1
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCCceeeEecCCCcchHHHHHHHHHHHHhcC
Q 011007 162 AELVIFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLLQVH 241 (496)
Q Consensus 162 a~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL~~~ 241 (496)
..+|+.+|+++||+++|++++|||.+|+++.++ .+..++.++++||++ .||+++ +|++++.||.+|..++++|
T Consensus 50 e~eLa~eAa~~ALekAGL~~~DID~IIvGdl~~--Q~~~As~vA~~LGIP----~fdV~~-ACSTf~~AL~lAa~lI~SG 122 (327)
T TIGR02845 50 ERKLMEDAVNLALKKANLKKDDVDFFLAGDLLN--QIITANFVARDLGIP----FLGLYG-ACSTSMETLALGAMLVDGG 122 (327)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEeCCCC--cccHHHHHHHHhCCC----EEEEec-cCHHHHHHHHHHHHHHhCC
Confidence 468999999999999999999999999887544 345688999999974 599995 9999999999999999999
Q ss_pred CCCEEEEEEECCCCC---CC-c--cC--CCccccccccccccccEEEEEeccCC
Q 011007 242 PNSNAVVVSTEIITP---NY-Y--QG--NERAMLLPNCLFRMGGAAILLSNRRR 287 (496)
Q Consensus 242 ~~~~aLVVs~E~~s~---~~-~--~~--~dr~~l~~~~lfgDGAaA~lLs~~~~ 287 (496)
..++||||++|..|. .+ + .+ ++|. +..+|+|||+|+||++.+.
T Consensus 123 ~ad~VLVV~Ssh~S~AErqfr~p~eyg~q~~~---ta~~tgdGAGA~vl~~~~~ 173 (327)
T TIGR02845 123 FADRVLAATSSHYATAERQFRYPTEYGVQKPP---TAQWTVTGAGAVLLASTGG 173 (327)
T ss_pred CCCEEEEEEecccchhhhhcccccccccCCCC---eeeEEEcccEEEEEeecCC
Confidence 999999999998872 11 1 12 4455 6889999999999998754
No 44
>KOG1393 consensus Hydroxymethylglutaryl-CoA synthase [Lipid transport and metabolism]
Probab=99.66 E-value=1.9e-15 Score=151.54 Aligned_cols=326 Identities=17% Similarity=0.257 Sum_probs=213.5
Q ss_pred cCCCceEEEEeeeecCCCCcccChHHHHHHHhhhhcCCcchHHHHHHHHHHcCCCceeecCCCCcCCCCCCchHHHHHhH
Q 011007 83 SKPRHVYLVDYACYKPPVTCRVPFATFMEHSRLILKNNPKSVEFQMRILERSGLGEETCLPPAIHYIPPTPTMEAARGEA 162 (496)
Q Consensus 83 ~~~~~v~Iv~~~~y~P~~~~~v~~~~~~e~~~~~~~~~~~~~~f~~~i~~~sGi~~r~~~~~~~~~~~~~~~~~~~~~ea 162 (496)
..|.+|+|.++-+|.|. .-|+++++..+-+. +.. | -..|+++....-. .-||+.
T Consensus 7 ~~p~dvGI~aieiyfP~--~yV~Q~elEk~d~v----s~g------K--ytIGLGq~~Mgfc------------sdrEDi 60 (462)
T KOG1393|consen 7 NWPKDVGIIAIEIYFPS--QYVDQEELEKFDGV----SAG------K--YTIGLGQTQMGFC------------SDREDI 60 (462)
T ss_pred cCccccceeEEEEEcCc--cccChhhHhhcCCc----ccc------c--eEeccCcceeccc------------Cchhhh
Confidence 35779999999999999 77999998765432 211 1 1367776554211 123456
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCEEEeeccC-CCCCCcHHHHHHHHcC--CCCCceeeEecCCCcchHHHHHHHHHHHHh
Q 011007 163 ELVIFSAMDSLLQKTGLKPKDIDILIVNCSL-FSPTPSLSAMVINKYK--LRSNIKSFNLSGMGCSAGLISIDLARDLLQ 239 (496)
Q Consensus 163 ~~la~~Aa~~aL~~agi~p~dID~LI~~ss~-~~~~Ps~a~~I~~~Lg--l~~~~~~~dl~g~gCsg~l~al~lA~~lL~ 239 (496)
..|+..++.+++++-+++++.|+.|-|.|.+ -.-..|.-..+.+.++ -..|+..+|..+ +|.||..||--|-+++.
T Consensus 61 ~Sl~ltvvs~Lmery~i~~~~IGRLEVGTETiiDKSKSVKt~LMqLF~~sgNtdIEGiDttn-ACYGGtaALfnavnWiE 139 (462)
T KOG1393|consen 61 ISLSLTVVSRLMERYNIDPDSIGRLEVGTETIIDKSKSVKTVLMQLFEESGNTDIEGIDTTN-ACYGGTAALFNAVNWIE 139 (462)
T ss_pred hhhhHHHHHHHHHHhCCChhhcceEEecceeccccchHHHHHHHHHhhhcCCCccccccccc-cccccHHHHHHHhhhhh
Confidence 7789999999999999999999999999854 3456788888999888 667899999995 99999999999999999
Q ss_pred cCC--CCEEEEEEECCCCCCCccCCCccccccccccccccEEEEEeccCCcccccceeEeeEEEEEecCCcccccceeec
Q 011007 240 VHP--NSNAVVVSTEIITPNYYQGNERAMLLPNCLFRMGGAAILLSNRRRNRSRAKYRLVHVVRTHKGADDKAYRCVFEE 317 (496)
Q Consensus 240 ~~~--~~~aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAaA~lLs~~~~~~~~~~~~L~~~~~t~~~~d~~~~~~~~~~ 317 (496)
+.. +++||||++|+.- +-.|+-| +.-|-||.|+|+++...-. |+- ++..+|+. ..|+. |.|
T Consensus 140 SssWDGr~aivV~gDIAv--Y~~G~aR------pTGGAgAVAmLIgPnApi~----fer-glr~thM~---hayDF-yKP 202 (462)
T KOG1393|consen 140 SSSWDGRYAIVVCGDIAV--YAKGNAR------PTGGAGAVAMLIGPNAPII----FER-GLRATHMQ---HAYDF-YKP 202 (462)
T ss_pred hcccCCceeEEEEeeEEE--ecCCCCC------CCCCcceEEEEEcCCCceE----ecc-cchhhhhh---hhhhc-cCC
Confidence 874 7999999999843 2233434 4579999999999865421 110 12223432 12321 222
Q ss_pred ccCCCceeeeechhHHHHHHHHhhhhhhhcCCCccchhHHHHHHHHHHHHhhhccccCCcccchhccccEEEeccCCHHH
Q 011007 318 EDKEGKVGISLSKDLMAIAGEALKSNITTIGPLVLPASEQLLFLMTLIGRKIFNPKWKPYIPDFKQAFEHFCIHAGGRAV 397 (496)
Q Consensus 318 ~d~~G~~g~~ls~d~~~v~g~~l~~~i~~~gp~vlp~~e~~~~~~~~~~~~v~~~~~~~~~p~~~~did~f~~H~~~~~v 397 (496)
.+..+-|.|.|.- .++- .-+-+........+++-+...+. -++-.++||++++|.+--++
T Consensus 203 ---------dl~SEyPvVDGkl---Si~c-------Yl~Ald~cY~~~~kK~~~~~~~~-~~~~l~~fdy~ifHsP~cKl 262 (462)
T KOG1393|consen 203 ---------DLLSEYPVVDGKL---SIQC-------YLSALDRCYTVYRKKIAAQWQKS-GSDNLNSFDYIIFHSPYCKL 262 (462)
T ss_pred ---------CCCCcCceecCee---hHHH-------HHHHHHHHHHHHHHHHHHHhccc-cCcccccCCeEEEeCchhhh
Confidence 1122333333310 0000 00000000011112222211111 11224689999999987766
Q ss_pred HHH-HHH-----------------------------------------HcCCChhhHhhhhhhhcccCCccCCchHHHHH
Q 011007 398 IDE-LQK-----------------------------------------NLQLSAEHVEASRMTLHRFGNTSSSSLWYEMS 435 (496)
Q Consensus 398 ~~~-i~~-----------------------------------------~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La 435 (496)
.+. +++ ...+-.+|+.+|...-.+.||+.++|+...|+
T Consensus 263 vqKs~arl~ynDf~~~~~~~~~~~~~~~~~~l~~s~~dr~~ek~~~~~s~~~~~~Kt~~sl~~~~~~GNmYTaSly~~l~ 342 (462)
T KOG1393|consen 263 VQKSLARLLYNDFLLNPSQLPESAGLESTLKLDESYTDRDLEKAFIKISKPIFKKKTKPSLLAPRRNGNMYTASLYASLA 342 (462)
T ss_pred HHHHHHHhhhhhhhhccccccccccccccccccccccchHHHHHHHHHhHHHHHhhccceeEeeccCCccccHHHHHHHH
Confidence 554 111 22233346666665556899999999999999
Q ss_pred HHHHhC--CCCCCCEEEEEeechhHhhhheeeEeeccCC
Q 011007 436 YIEEKG--RMKKGDRVWQIAFGSGFKCNSAVWKCNKTIK 472 (496)
Q Consensus 436 ~~~~~g--~i~~Gd~Vll~~fG~G~~~~sav~r~~~~~~ 472 (496)
.++... .--.|.||.+.++|+|...+..-+|...+..
T Consensus 343 sll~~~~~d~l~Gkrig~FSYGSGlAAs~fs~~v~~da~ 381 (462)
T KOG1393|consen 343 SLLSAVPADELAGKRIGMFSYGSGLAASMFSLRVTQDAT 381 (462)
T ss_pred HHHhccchhhhhccEEEEEeecCcchhheEEEEecCCCC
Confidence 988865 3347999999999999988888888776544
No 45
>PRK08304 stage V sporulation protein AD; Validated
Probab=99.57 E-value=1.8e-13 Score=138.00 Aligned_cols=117 Identities=21% Similarity=0.242 Sum_probs=98.6
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCCceeeEecCCCcchHHHHHHHHHHHHhcC
Q 011007 162 AELVIFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLLQVH 241 (496)
Q Consensus 162 a~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL~~~ 241 (496)
..+|+.+|+++||+++|++++|||.+|+++...+ +..+..+++.||+ +++++++ +|+++..||.+|..+++++
T Consensus 56 eseLa~eAa~~ALekAGI~~~DID~lI~Gdll~Q--~~sAs~vA~~LGI----Pa~dV~g-ACST~~~AL~lAa~lI~SG 128 (337)
T PRK08304 56 ERKMMEDAIQQALQKANLKKSDIDYLLAGDLLNQ--IISANFAARELGI----PFLGLYG-ACSTMMESLALGSMLIDGG 128 (337)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCC--cchHHHHHHHhCC----cEEEEec-cCHHHHHHHHHHHHHHhcC
Confidence 3689999999999999999999999998865443 4678899999997 5999995 9999999999999999999
Q ss_pred CCCEEEEEEECCCCC---CCccC----CCccccccccccccccEEEEEeccCC
Q 011007 242 PNSNAVVVSTEIITP---NYYQG----NERAMLLPNCLFRMGGAAILLSNRRR 287 (496)
Q Consensus 242 ~~~~aLVVs~E~~s~---~~~~~----~dr~~l~~~~lfgDGAaA~lLs~~~~ 287 (496)
..++||||++|..+. .|..+ ..|. .+...+++||+|+||++...
T Consensus 129 ~ad~VLVV~Ssh~s~aerqfr~P~eyg~qrp--~taqwtvtGAGA~i~~~~~~ 179 (337)
T PRK08304 129 FADRVLAATSSHFATAERQFRFPTEYGGQRP--PTAQWTVTGAGAVLLSREGS 179 (337)
T ss_pred CCCEEEEEEcchhhhhhhhccCchhccccCC--CcceEEeeccEEEEEecCCC
Confidence 999999999999885 12222 2333 25789999999999998754
No 46
>cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=99.51 E-value=1e-12 Score=137.99 Aligned_cols=93 Identities=17% Similarity=0.249 Sum_probs=84.1
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEeecc-CCCCCCcHHHHHHHHcCCCCCceeeEecCCCcchHHHHHHHHHHHHhc
Q 011007 162 AELVIFSAMDSLLQKTGLKPKDIDILIVNCS-LFSPTPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLLQV 240 (496)
Q Consensus 162 a~~la~~Aa~~aL~~agi~p~dID~LI~~ss-~~~~~Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL~~ 240 (496)
..+|+.+|++++|+++|++++|||.+|++|+ +++..|..+..++..+|++.++++++++ ++|++++.+|.+|..++++
T Consensus 22 ~~~La~~A~~~AL~dAgl~~~dID~vi~~~~~~~~~~~~~a~~v~~~lGl~~~~~~~~v~-~~c~s~~~al~~A~~~I~s 100 (386)
T cd00751 22 ADDLGAAVIKALLERAGLDPEEVDDVIMGNVLQAGEGQNPARQAALLAGLPESVPATTVN-RVCGSGLQAVALAAQSIAA 100 (386)
T ss_pred HHHHHHHHHHHHHHhcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCCchhhhc-cccHHHHHHHHHHHHHHHC
Confidence 6899999999999999999999999998765 4555788888899999998558899999 6999999999999999999
Q ss_pred CCCCEEEEEEECCCC
Q 011007 241 HPNSNAVVVSTEIIT 255 (496)
Q Consensus 241 ~~~~~aLVVs~E~~s 255 (496)
|..++|||+++|.+|
T Consensus 101 G~~~~vLv~g~e~~s 115 (386)
T cd00751 101 GEADVVVAGGVESMS 115 (386)
T ss_pred CCCCeEEEeeeeccc
Confidence 999999999999865
No 47
>cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II. KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP.
Probab=99.48 E-value=4.4e-12 Score=133.51 Aligned_cols=121 Identities=15% Similarity=0.256 Sum_probs=92.7
Q ss_pred hHHHHHHHHHHHHHHHcCCCcCCcCE----EEeeccC-C--------------------------CCCCcHHHHHHHHcC
Q 011007 161 EAELVIFSAMDSLLQKTGLKPKDIDI----LIVNCSL-F--------------------------SPTPSLSAMVINKYK 209 (496)
Q Consensus 161 ea~~la~~Aa~~aL~~agi~p~dID~----LI~~ss~-~--------------------------~~~Ps~a~~I~~~Lg 209 (496)
....|+..|++++|+++|+++++||. +++.++. + ...+..+.+|+..||
T Consensus 70 ~~~~l~~~aa~~AL~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 149 (406)
T cd00834 70 RFAQFALAAAEEALADAGLDPEELDPERIGVVIGSGIGGLATIEEAYRALLEKGPRRVSPFFVPMALPNMAAGQVAIRLG 149 (406)
T ss_pred HHHHHHHHHHHHHHHHcCCCcccCCccceEEEEccCCcchHHHHHHHHHHHhcCCcccChhHHhhhcccHHHHHHHHHhC
Confidence 36789999999999999999876654 4444322 1 123567889999999
Q ss_pred CCCCceeeEecCCCcchHHHHHHHHHHHHhcCCCCEEEEEEECCCCCC----------------------CccCCCcccc
Q 011007 210 LRSNIKSFNLSGMGCSAGLISIDLARDLLQVHPNSNAVVVSTEIITPN----------------------YYQGNERAML 267 (496)
Q Consensus 210 l~~~~~~~dl~g~gCsg~l~al~lA~~lL~~~~~~~aLVVs~E~~s~~----------------------~~~~~dr~~l 267 (496)
++ ..++.++ .+|++++.||..|.++|++|..++|||+++|..+.. ..+...+.
T Consensus 150 l~--g~~~~v~-~acas~~~Al~~A~~~i~~G~~d~aLvgg~d~~~~p~~~~~~~~~~~l~~~~~~p~~~~~pf~~~~-- 224 (406)
T cd00834 150 LR--GPNYTVS-TACASGAHAIGDAARLIRLGRADVVIAGGAEALITPLTLAGFAALRALSTRNDDPEKASRPFDKDR-- 224 (406)
T ss_pred CC--Ccccccc-hHHHHHHHHHHHHHHHHHcCCCCEEEEcCcccccCHHHHHHHHhcCCcCCCCCCCccCCCCCCCCC--
Confidence 96 4789999 599999999999999999999999999999987610 00111111
Q ss_pred ccccccccccEEEEEeccCC
Q 011007 268 LPNCLFRMGGAAILLSNRRR 287 (496)
Q Consensus 268 ~~~~lfgDGAaA~lLs~~~~ 287 (496)
...++||||+|+||++.+.
T Consensus 225 -~g~~~geGA~a~vL~~~~~ 243 (406)
T cd00834 225 -DGFVLGEGAGVLVLESLEH 243 (406)
T ss_pred -CCEeeeccEEEEEEecHHH
Confidence 3578999999999997653
No 48
>PF08545 ACP_syn_III: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; InterPro: IPR013751 Fatty acid synthesis (FAS) is a vital aspect of cellular physiology which can occur by two distinct pathways. The FAS I pathway, which generally only produces palmitate, is found in eukaryotes and is performed either by a single polypeptide which contains all the reaction centres needed to form a fatty acid, or by two polypeptides which interact to form a multifunctional complex. The FAS II pathway, which is capable of producing many different fatty acids, is found in mitochondria, bacteria, plants and parasites, and is performed by many distinct proteins, each of which catalyses a single step within the pathway. The large diversity of products generated by this pathway is possible because the acyl carrier protein (ACP) intermediates are diffusible entities that can be diverted into other biosynthetic pathways []. 3-Oxoacyl-[acyl carrier protein (ACP)] synthase III catalyses the first condensation step within the FAS II pathway, using acetyl-CoA as the primer and malonyl-ACP as the acceptor, as shown below. Acyl-[ACP] + malonyl-[ACP] = 3-oxoacyl-[ACP] + CO(2) + [ACP] The oxoacyl-ACP formed by this reaction subsequently enters the elongation cycle, where the acyl chain is progressively lengthened by the combined activities of several enzymes. The enzymes studied so far are homodimers, where each monomer consists of two domains (N-terminal and C-terminal) which are similar in structure, but not in sequence [, ]. This entry represents a conserved region within the N-terminal domain.; GO: 0004315 3-oxoacyl-[acyl-carrier-protein] synthase activity, 0006633 fatty acid biosynthetic process; PDB: 1ZOW_C 1UB7_B 3IL7_A 3IL3_A 2X3E_B 4DFE_C 3LED_B 3ROW_B 3S23_A 3S1Z_A ....
Probab=99.43 E-value=2.1e-13 Score=111.36 Aligned_cols=79 Identities=24% Similarity=0.458 Sum_probs=60.9
Q ss_pred eEecCCCcchHHHHHHHHHHHHhcCCCCEEEEEEECCCCCCCccCCCccccccccccccccEEEEEeccCCcccccceeE
Q 011007 217 FNLSGMGCSAGLISIDLARDLLQVHPNSNAVVVSTEIITPNYYQGNERAMLLPNCLFRMGGAAILLSNRRRNRSRAKYRL 296 (496)
Q Consensus 217 ~dl~g~gCsg~l~al~lA~~lL~~~~~~~aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAaA~lLs~~~~~~~~~~~~L 296 (496)
|||+ ++|+|++.||++|.++++++..++||||++|+.+. +.+..++. +..+|||||+|+||++.++. ++++
T Consensus 1 fDi~-~~C~g~~~al~~A~~~i~~g~~~~~Lvv~~d~~s~-~~~~~~~~---~~~~~gDgAaA~vl~~~~~~----~~~i 71 (80)
T PF08545_consen 1 FDIN-QACAGFLYALDVAAALIASGRAKNALVVGGDRLSR-IVDRTDRQ---TAFIFGDGAAAVVLSRDEEG----GFGI 71 (80)
T ss_dssp EEEE--GGGHHHHHHHHHHHHHHTTS-SEEEEEEEEEGGG-GSHTTHHH---HHTTB-EEEEEEEEEEESSS----SCEE
T ss_pred Cccc-ccchHHHHHHHHHHHHHhhccCCEEEEEeeccccc-cccccccC---cceeecchheEEEEEecCCC----CCeE
Confidence 7999 69999999999999999999899999999999997 54555554 45799999999999997432 3554
Q ss_pred eeEEEEEecCC
Q 011007 297 VHVVRTHKGAD 307 (496)
Q Consensus 297 ~~~~~t~~~~d 307 (496)
+ .++..+|
T Consensus 72 l---~~~~~td 79 (80)
T PF08545_consen 72 L---DSHLRTD 79 (80)
T ss_dssp E---EEEEEE-
T ss_pred E---EEEEEcC
Confidence 4 4455554
No 49
>PRK05656 acetyl-CoA acetyltransferase; Provisional
Probab=99.41 E-value=1.8e-11 Score=128.98 Aligned_cols=94 Identities=20% Similarity=0.275 Sum_probs=84.2
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEeeccC-CCCCCcHHHHHHHHcCCCCCceeeEecCCCcchHHHHHHHHHHHHhc
Q 011007 162 AELVIFSAMDSLLQKTGLKPKDIDILIVNCSL-FSPTPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLLQV 240 (496)
Q Consensus 162 a~~la~~Aa~~aL~~agi~p~dID~LI~~ss~-~~~~Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL~~ 240 (496)
+.+|+.+|++++|+++|++|+|||.+|++|+. ....|..+..++..+|++..+++++++ .+|++|+.++..|.+++++
T Consensus 26 ~~~La~~A~~~AL~~agl~~~dID~vi~g~~~~~~~~~~~a~~va~~lGl~~~~p~~~V~-~~Casg~~ai~~A~~~I~s 104 (393)
T PRK05656 26 AVELGAAVIRRLLEQTGLDPAQVDEVILGQVLTAGAGQNPARQAAIKAGLPHSVPAMTLN-KVCGSGLKALHLAAQAIRC 104 (393)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEEecCCCCCCcHHHHHHHHcCCCCCcceEEec-ccchhHHHHHHHHHHHHHc
Confidence 68999999999999999999999999998753 334566788899999998558999999 6999999999999999999
Q ss_pred CCCCEEEEEEECCCCC
Q 011007 241 HPNSNAVVVSTEIITP 256 (496)
Q Consensus 241 ~~~~~aLVVs~E~~s~ 256 (496)
|..+++||+++|.+|.
T Consensus 105 G~~d~vLv~G~E~ms~ 120 (393)
T PRK05656 105 GDAEVIIAGGQENMSL 120 (393)
T ss_pred CCCCEEEEEEEhhhcc
Confidence 9999999999997764
No 50
>PRK09051 beta-ketothiolase; Provisional
Probab=99.40 E-value=2.4e-11 Score=127.98 Aligned_cols=94 Identities=16% Similarity=0.215 Sum_probs=82.1
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEeecc-CCCCCC-cHHHHHHHHcCCCCCceeeEecCCCcchHHHHHHHHHHHHh
Q 011007 162 AELVIFSAMDSLLQKTGLKPKDIDILIVNCS-LFSPTP-SLSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLLQ 239 (496)
Q Consensus 162 a~~la~~Aa~~aL~~agi~p~dID~LI~~ss-~~~~~P-s~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL~ 239 (496)
..+|+.+|++++|+++|++|+|||.+|++|+ +++..+ ..+..+...+|++.++++++++ .+|++|+.|+.+|.++++
T Consensus 27 ~~eL~~~A~~~AL~~agi~~~dID~vi~g~~~~~~~~~~~~a~~~~~~~Gl~~~~p~~~V~-~aCaSg~~Al~~A~~~I~ 105 (394)
T PRK09051 27 PTDLGATVVREALARAGVDPDQVGHVVFGHVIPTEPRDMYLSRVAAINAGVPQETPAFNVN-RLCGSGLQAIVSAAQAIL 105 (394)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHcCEEEEeeeccccCCCccHHHHHHHHcCCCCCCceEEec-ccchHHHHHHHHHHHHHH
Confidence 6899999999999999999999999999875 444443 4555666778997678999999 699999999999999999
Q ss_pred cCCCCEEEEEEECCCCC
Q 011007 240 VHPNSNAVVVSTEIITP 256 (496)
Q Consensus 240 ~~~~~~aLVVs~E~~s~ 256 (496)
+|..+++||+++|.+|.
T Consensus 106 sG~~d~vLvvG~E~mS~ 122 (394)
T PRK09051 106 LGDADVAIGGGAESMSR 122 (394)
T ss_pred cCCCCEEEEEeehhccc
Confidence 99999999999998874
No 51
>PRK08313 acetyl-CoA acetyltransferase; Provisional
Probab=99.37 E-value=4.8e-11 Score=125.43 Aligned_cols=92 Identities=17% Similarity=0.094 Sum_probs=79.5
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEeeccCCCC--CCcHHHHHHHHcCCCCCceeeEecCCCcchHHHHHHHHHHHHh
Q 011007 162 AELVIFSAMDSLLQKTGLKPKDIDILIVNCSLFSP--TPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLLQ 239 (496)
Q Consensus 162 a~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~--~Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL~ 239 (496)
..+|+.+|++++|+++|++++|||.+|+++++++. .+..+..|+++||++ ..++++++ .+|+++..++..|..+|+
T Consensus 24 ~~eL~~eAa~~Al~dAgl~~~dID~iv~~~~~~~~~~~~~~~~~va~~LGl~-~~~~~~v~-~~casg~~al~~A~~~I~ 101 (386)
T PRK08313 24 MAGLVREAIDRALADAGLTWDDIDAVVVGKAPDFFEGVMMPELFLADALGAT-GKPLIRVH-TAGSVGGSTAVVAASLVQ 101 (386)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEeccccccccccCchHHHHHhcCCC-CCceEEEe-ccCHHHHHHHHHHHHHHH
Confidence 57899999999999999999999999987654432 122236899999997 67899999 599999999999999999
Q ss_pred cCCCCEEEEEEECCCC
Q 011007 240 VHPNSNAVVVSTEIIT 255 (496)
Q Consensus 240 ~~~~~~aLVVs~E~~s 255 (496)
+|..++||||++|..+
T Consensus 102 sG~~~~vLVvg~e~~s 117 (386)
T PRK08313 102 SGVYRRVLAVAWEKQS 117 (386)
T ss_pred CCCCCEEEEEEEEEcc
Confidence 9999999999999764
No 52
>PRK06064 acetyl-CoA acetyltransferase; Provisional
Probab=99.37 E-value=5.1e-11 Score=125.32 Aligned_cols=92 Identities=17% Similarity=0.178 Sum_probs=82.2
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEeecc-CCC--CCCcHHHHHHHHcCCCCCceeeEecCCCcchHHHHHHHHHHHH
Q 011007 162 AELVIFSAMDSLLQKTGLKPKDIDILIVNCS-LFS--PTPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLL 238 (496)
Q Consensus 162 a~~la~~Aa~~aL~~agi~p~dID~LI~~ss-~~~--~~Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL 238 (496)
..+|+.+|++++|+++|++++|||.+|++++ ++. ..|..+..++..+|++ ..++++++ ++|++++.+|..|..++
T Consensus 22 ~~eLa~~a~~~Al~dagl~~~~Id~vi~g~~~~~~~~~~~~~a~~va~~lGl~-~~~~~~v~-~aCasg~~ai~~A~~~I 99 (389)
T PRK06064 22 LRDLAVEAGLEALEDAGIDGKDIDAMYVGNMSAGLFVSQEHIAALIADYAGLA-PIPATRVE-AACASGGAALRQAYLAV 99 (389)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccccccccccHHHHHHHHcCCC-CCCeeEEe-CCcHHHHHHHHHHHHHH
Confidence 5789999999999999999999999998764 333 2467888999999997 78899999 69999999999999999
Q ss_pred hcCCCCEEEEEEECCCC
Q 011007 239 QVHPNSNAVVVSTEIIT 255 (496)
Q Consensus 239 ~~~~~~~aLVVs~E~~s 255 (496)
++|..+++||+++|.+|
T Consensus 100 ~sG~~~~vLv~G~e~~s 116 (389)
T PRK06064 100 ASGEADVVLAAGVEKMT 116 (389)
T ss_pred HCCCCCEEEEEEEEecc
Confidence 99999999999999765
No 53
>PRK09052 acetyl-CoA acetyltransferase; Provisional
Probab=99.34 E-value=6.5e-11 Score=124.85 Aligned_cols=94 Identities=19% Similarity=0.259 Sum_probs=81.4
Q ss_pred HHHHHHHHHHHHHHHc-CCCcCCcCEEEeecc-CCCCCCcHHHHHH-HHcCCCCCceeeEecCCCcchHHHHHHHHHHHH
Q 011007 162 AELVIFSAMDSLLQKT-GLKPKDIDILIVNCS-LFSPTPSLSAMVI-NKYKLRSNIKSFNLSGMGCSAGLISIDLARDLL 238 (496)
Q Consensus 162 a~~la~~Aa~~aL~~a-gi~p~dID~LI~~ss-~~~~~Ps~a~~I~-~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL 238 (496)
+.+|+.+|++++|+++ |++|+|||.+|++|+ ++...|....+++ ..+|++..+++++++ .+|++|+.|+..|.+++
T Consensus 31 ~~eLa~~A~~~AL~~a~gl~~~dID~vi~g~~~~~~~~~~~~ar~~~~~~Gl~~~~p~~~V~-~aCaSg~~Al~~A~~~I 109 (399)
T PRK09052 31 PDDLLAHVLRSAVAQVPGLDPKLIEDAIVGCAMPEAEQGLNVARIGALLAGLPNSVGGVTVN-RFCASGLQAVAMAADRI 109 (399)
T ss_pred HHHHHHHHHHHHHHhccCcCHHHCCEEEEEecCCCCCCCchHHHHHHHHcCCCCCCceeeec-chhhHHHHHHHHHHHHH
Confidence 6899999999999997 999999999999865 4555566666654 455997458999999 69999999999999999
Q ss_pred hcCCCCEEEEEEECCCCC
Q 011007 239 QVHPNSNAVVVSTEIITP 256 (496)
Q Consensus 239 ~~~~~~~aLVVs~E~~s~ 256 (496)
++|..+.+||+++|.+|.
T Consensus 110 ~sG~~d~vLv~G~E~mS~ 127 (399)
T PRK09052 110 RVGEADVMIAAGVESMSM 127 (399)
T ss_pred HCCCCCEEEEEEEecccc
Confidence 999999999999998874
No 54
>cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism. The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein.
Probab=99.34 E-value=9.7e-11 Score=122.36 Aligned_cols=93 Identities=17% Similarity=0.165 Sum_probs=84.4
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEeecc-CCCCCCcHHHHHHHHcCCCCCceeeEecCCCcchHHHHHHHHHHHHhc
Q 011007 162 AELVIFSAMDSLLQKTGLKPKDIDILIVNCS-LFSPTPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLLQV 240 (496)
Q Consensus 162 a~~la~~Aa~~aL~~agi~p~dID~LI~~ss-~~~~~Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL~~ 240 (496)
..+|+.+|++++|+++|++++|||.+++.++ +....|..+..++.++|++ ++.+++++ .+|++++.++..|..++++
T Consensus 16 ~~eL~~~A~~~Al~dagl~~~~Id~vi~g~~~~~~~~~~~a~~va~~lGl~-~~~~~~v~-~~c~sg~~al~~Aa~~I~s 93 (375)
T cd00829 16 PLELAAEAARAALDDAGLEPADIDAVVVGNAAGGRFQSFPGALIAEYLGLL-GKPATRVE-AAGASGSAAVRAAAAAIAS 93 (375)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEecccccccccchHHHHHHHcCCC-CcceeeEe-CccHHHHHHHHHHHHHHHh
Confidence 6899999999999999999999999998765 4444577889999999997 78999999 6999999999999999999
Q ss_pred CCCCEEEEEEECCCCC
Q 011007 241 HPNSNAVVVSTEIITP 256 (496)
Q Consensus 241 ~~~~~aLVVs~E~~s~ 256 (496)
+..+.|||+++|..+.
T Consensus 94 G~~~~vlv~g~e~~s~ 109 (375)
T cd00829 94 GLADVVLVVGAEKMSD 109 (375)
T ss_pred CCCCEEEEEEEeeccc
Confidence 9999999999998764
No 55
>smart00825 PKS_KS Beta-ketoacyl synthase. The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains.
Probab=99.32 E-value=8.4e-11 Score=124.74 Aligned_cols=121 Identities=14% Similarity=0.194 Sum_probs=93.9
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcC----EEEeeccC-CCC-------------------CCcHHHHHHHHcCCCCCceee
Q 011007 162 AELVIFSAMDSLLQKTGLKPKDID----ILIVNCSL-FSP-------------------TPSLSAMVINKYKLRSNIKSF 217 (496)
Q Consensus 162 a~~la~~Aa~~aL~~agi~p~dID----~LI~~ss~-~~~-------------------~Ps~a~~I~~~Lgl~~~~~~~ 217 (496)
...|+..|++++|+++|+++++|| .+|++++. ++. .+..+..|+..+|++ -.++
T Consensus 87 ~~~l~~~aa~~Al~dAGl~~~~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~lgl~--g~~~ 164 (424)
T smart00825 87 QQRLLLEVAWEALEDAGIDPESLRGSRTGVFVGAMSSDYAELLARDPEDIEGYAATGTARSFIANRISYFFDLR--GPSV 164 (424)
T ss_pred HHHHHHHHHHHHHHHcCCChhHcCCCCCEEEEEEcHHHHHHHHhhCccccchhhhccchhHHHHHHHHHHhCCC--CCcc
Confidence 567999999999999999999998 67777542 221 445778899999997 3789
Q ss_pred EecCCCcchHHHHHHHHHHHHhcCCCCEEEEEEECCCCCC----------Cc------cCCCccccccccccccccEEEE
Q 011007 218 NLSGMGCSAGLISIDLARDLLQVHPNSNAVVVSTEIITPN----------YY------QGNERAMLLPNCLFRMGGAAIL 281 (496)
Q Consensus 218 dl~g~gCsg~l~al~lA~~lL~~~~~~~aLVVs~E~~s~~----------~~------~~~dr~~l~~~~lfgDGAaA~l 281 (496)
.++ .+|++++.||..|.++|++|..+++||+++|..... +. .+-|.. -...++||||+|+|
T Consensus 165 ~v~-~acasg~~Al~~A~~~I~~G~~d~vlvgg~~~~~~~~~~~~~~~~~~l~~~~~~~pf~~~--~~g~~~geGAaalV 241 (424)
T smart00825 165 TVD-TACSSSLVALHLACQSLRSGECDMALAGGVNLILSPDTFVGFSRAGMLSPDGRCKTFDAD--ADGYVRGEGVGVVV 241 (424)
T ss_pred ccc-cHhHHHHHHHHHHHHHHHcCCCCeeEEeeeeecCCHHHHHHHhhcCCCCCCCCCCCCCCC--CCcccccceEEEEE
Confidence 999 599999999999999999999999999999974320 00 011111 13568999999999
Q ss_pred EeccCC
Q 011007 282 LSNRRR 287 (496)
Q Consensus 282 Ls~~~~ 287 (496)
|++.+.
T Consensus 242 Le~~e~ 247 (424)
T smart00825 242 LKRLSD 247 (424)
T ss_pred EccHHH
Confidence 997543
No 56
>PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.28 E-value=8.8e-10 Score=117.33 Aligned_cols=119 Identities=17% Similarity=0.267 Sum_probs=87.7
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcC------------------EEEeecc----------------CC-------CCCCcH
Q 011007 162 AELVIFSAMDSLLQKTGLKPKDID------------------ILIVNCS----------------LF-------SPTPSL 200 (496)
Q Consensus 162 a~~la~~Aa~~aL~~agi~p~dID------------------~LI~~ss----------------~~-------~~~Ps~ 200 (496)
...++..|++++|+++|+++.+.+ .++..+. .. ...|+.
T Consensus 75 ~~~~~~~aa~~Al~dAgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (425)
T PRK06501 75 SEALARLAAEEALAQAGIGKGDFPGPLFLAAPPVELEWPARFALAAAVGDNDAPSYDRLLRAARGGRFDALHERFQFGSI 154 (425)
T ss_pred HHHHHHHHHHHHHHHcCCCccccccceeeccccccCCCCceEEEEEecCCccHHHHHHHHhhcCcccCChhhhhhcccHH
Confidence 456889999999999999654322 1111111 11 145678
Q ss_pred HHHHHHHcCCCCCceeeEecCCCcchHHHHHHHHHHHHhcCCCCEEEEEEECC---------------CCCCC-------
Q 011007 201 SAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLLQVHPNSNAVVVSTEI---------------ITPNY------- 258 (496)
Q Consensus 201 a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL~~~~~~~aLVVs~E~---------------~s~~~------- 258 (496)
+..|+.+||++ ..+++++ .+|++++.||..|.++|+++..+++||+++|. ++...
T Consensus 155 a~~i~~~~gl~--G~~~~i~-~aCaS~~~Al~~A~~~I~~G~~d~vlvgG~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~ 231 (425)
T PRK06501 155 ADRLADRFGTR--GLPISLS-TACASGATAIQLGVEAIRRGETDRALCIATDGSVSAEALIRFSLLSALSTQNDPPEKAS 231 (425)
T ss_pred HHHHHHHhCCC--CCceeec-CccHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHHhhccccCCCCCCccc
Confidence 99999999996 4789999 59999999999999999999999999999993 22100
Q ss_pred cc-CCCccccccccccccccEEEEEeccCC
Q 011007 259 YQ-GNERAMLLPNCLFRMGGAAILLSNRRR 287 (496)
Q Consensus 259 ~~-~~dr~~l~~~~lfgDGAaA~lLs~~~~ 287 (496)
.+ ..+|+ ..++||||+|+||++.+.
T Consensus 232 rpfd~~r~----G~v~GEGaaalVLe~~~~ 257 (425)
T PRK06501 232 KPFSKDRD----GFVMAEGAGALVLESLES 257 (425)
T ss_pred CCCCCCCC----CeeeeccEEEEEECcHHH
Confidence 00 02333 478999999999998653
No 57
>PRK12404 stage V sporulation protein AD; Provisional
Probab=99.25 E-value=4.7e-10 Score=112.79 Aligned_cols=117 Identities=15% Similarity=0.239 Sum_probs=93.0
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCCceeeEecCCCcchHHHHHHHHHHHHhcC
Q 011007 162 AELVIFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLLQVH 241 (496)
Q Consensus 162 a~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL~~~ 241 (496)
-.+|+.+|+++||+++|++++|||.+++.+......|+ ..++++||++ .+++.+ +||++..||.+|..++++|
T Consensus 54 E~~L~~EA~~~AL~kAGI~~~DID~i~vGdL~nQ~ips--sfvar~LGIP----~~gV~g-ACSTg~eAL~lAa~~VaSG 126 (334)
T PRK12404 54 ERKLLEEACSRAIEKAKLRKEDIQFFLAGDLMNQITPT--SFAARTLGIP----YLGLFG-ACSTSMEGLALAALIVNSG 126 (334)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCcCcH--HHHHHHhCCC----ccceee-cCHHHHHHHHHHHHHHHcC
Confidence 45799999999999999999999999999877666666 4899999965 599995 9999999999999999999
Q ss_pred CCCEEEEEEECCCCC---CCcc----CCCccccccccccccccEEEEEeccCC
Q 011007 242 PNSNAVVVSTEIITP---NYYQ----GNERAMLLPNCLFRMGGAAILLSNRRR 287 (496)
Q Consensus 242 ~~~~aLVVs~E~~s~---~~~~----~~dr~~l~~~~lfgDGAaA~lLs~~~~ 287 (496)
..++|||+++--... .|.. +..|.. +...---||+|+||++...
T Consensus 127 ~Ad~VLavtsSH~~~aErqfR~P~eyG~Qrp~--taqwTvTgaga~~l~~~~~ 177 (334)
T PRK12404 127 GAKYVLTGASSHNAAVEKQFRYPTEYGGQKPP--TAQWTVTGAGAAILSKTGD 177 (334)
T ss_pred CCCEEEEEeCcccchhhhhccCcccccCcCCC--cccEEEEceEEEEEecCCC
Confidence 999999998765542 2211 223331 3344457899999997643
No 58
>cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases.They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues.
Probab=99.24 E-value=3.1e-10 Score=119.82 Aligned_cols=123 Identities=13% Similarity=0.087 Sum_probs=90.3
Q ss_pred hHHHHHHHHHHHHHHHcCCCcCC-cC----EEEeeccCC-----------------------CCC--CcHHHHHHHHcCC
Q 011007 161 EAELVIFSAMDSLLQKTGLKPKD-ID----ILIVNCSLF-----------------------SPT--PSLSAMVINKYKL 210 (496)
Q Consensus 161 ea~~la~~Aa~~aL~~agi~p~d-ID----~LI~~ss~~-----------------------~~~--Ps~a~~I~~~Lgl 210 (496)
....++..|++++|+++|+++++ ++ .+++.++.. ... ...+..|...||+
T Consensus 71 ~~~~l~~~aa~~Al~dAGl~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl 150 (407)
T cd00828 71 RTTLLALVATEEALADAGITDPYEVHPSEVGVVVGSGMGGLRFLRRGGKLDARAVNPYVSPKWMLSPNTVAGWVNILLLS 150 (407)
T ss_pred HHHHHHHHHHHHHHHhCCCCccccCCccCeEEEEeeccCCHHHHHHHHHHHhhccCCcccchhccccchHHHHHHHHhCc
Confidence 36789999999999999998765 33 233333210 111 4567889999999
Q ss_pred CCCceeeEecCCCcchHHHHHHHHHHHHhcCCCCEEEEEEECCCCC--------------C------CccCCCccccccc
Q 011007 211 RSNIKSFNLSGMGCSAGLISIDLARDLLQVHPNSNAVVVSTEIITP--------------N------YYQGNERAMLLPN 270 (496)
Q Consensus 211 ~~~~~~~dl~g~gCsg~l~al~lA~~lL~~~~~~~aLVVs~E~~s~--------------~------~~~~~dr~~l~~~ 270 (496)
+ .-.++.++ .+|++++.||..|.++|++|..+.+||.++|..+. . ...+-|+. -..
T Consensus 151 ~-~Gp~~tv~-~aCaS~~~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~f~~~~~ls~~~~~~~~~~~pfd~~--~~G 226 (407)
T cd00828 151 S-HGPIKTPV-GACATALEALDLAVEAIRSGKADIVVVGGVEDPLEEGLSGFANMGALSTAEEEPEEMSRPFDET--RDG 226 (407)
T ss_pred C-CCCCcCcc-cHHHHHHHHHHHHHHHHHcCCCCEEEEccccccChHHHHHHHHcCCCCCCCCCCCcccCCCcCC--CCc
Confidence 3 24789999 59999999999999999999999999999998651 0 00011111 135
Q ss_pred cccccccEEEEEeccCC
Q 011007 271 CLFRMGGAAILLSNRRR 287 (496)
Q Consensus 271 ~lfgDGAaA~lLs~~~~ 287 (496)
+++||||+|+||++.+.
T Consensus 227 ~~~gEGAaalvLe~~~~ 243 (407)
T cd00828 227 FVEAEGAGVLVLERAEL 243 (407)
T ss_pred EEeecceEEEEEeeHHH
Confidence 78999999999998653
No 59
>cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations. PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits.
Probab=99.23 E-value=1.6e-09 Score=114.50 Aligned_cols=120 Identities=18% Similarity=0.210 Sum_probs=92.1
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCE----EEeecc-CCC-------------------CCCcHHHHHHHHcCCCCCceee
Q 011007 162 AELVIFSAMDSLLQKTGLKPKDIDI----LIVNCS-LFS-------------------PTPSLSAMVINKYKLRSNIKSF 217 (496)
Q Consensus 162 a~~la~~Aa~~aL~~agi~p~dID~----LI~~ss-~~~-------------------~~Ps~a~~I~~~Lgl~~~~~~~ 217 (496)
...|+..|++++|+++|++++++|. +++.++ .++ ..+..+..|...+|++ ..++
T Consensus 87 ~~~l~~~aa~~AL~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~~gl~--g~~~ 164 (421)
T cd00833 87 QQRLLLEVAWEALEDAGYSPESLAGSRTGVFVGASSSDYLELLARDPDEIDAYAATGTSRAFLANRISYFFDLR--GPSL 164 (421)
T ss_pred HHHHHHHHHHHHHHHcCCCchhcCCCCceEEeCcCHHHHHHHHhhcccccCcccccCcchHHHHHHHHHHcCCC--CCce
Confidence 5789999999999999999887774 555543 111 1245678899999996 3899
Q ss_pred EecCCCcchHHHHHHHHHHHHhcCCCCEEEEEEECCCCCC-----------------CccCCCccccccccccccccEEE
Q 011007 218 NLSGMGCSAGLISIDLARDLLQVHPNSNAVVVSTEIITPN-----------------YYQGNERAMLLPNCLFRMGGAAI 280 (496)
Q Consensus 218 dl~g~gCsg~l~al~lA~~lL~~~~~~~aLVVs~E~~s~~-----------------~~~~~dr~~l~~~~lfgDGAaA~ 280 (496)
.++ .+|++++.||..|.++|++|..+.+||+++|..+.. ..+...+. ...++||||+|+
T Consensus 165 ~v~-~acas~~~Al~~A~~~I~~G~~d~~lvgg~~~~~~~~~~~~~~~~~~l~~~~~~~pf~~~~---~g~~~geGAaal 240 (421)
T cd00833 165 TVD-TACSSSLVALHLACQSLRSGECDLALVGGVNLILSPDMFVGFSKAGMLSPDGRCRPFDADA---DGYVRGEGVGVV 240 (421)
T ss_pred eec-cHhHHHHHHHHHHHHHHHcCCCCeeEEeeeeccCCHHHHHHHhhCCCCCCCCCCCCCCCCC---CCeeeeceEEEE
Confidence 999 599999999999999999999999999999975310 00111111 357899999999
Q ss_pred EEeccCC
Q 011007 281 LLSNRRR 287 (496)
Q Consensus 281 lLs~~~~ 287 (496)
||++.+.
T Consensus 241 vL~~~~~ 247 (421)
T cd00833 241 VLKRLSD 247 (421)
T ss_pred EEeeHHH
Confidence 9997653
No 60
>TIGR03150 fabF beta-ketoacyl-acyl-carrier-protein synthase II. FabB sequences should fall well below the noise cutoff of this model.
Probab=99.22 E-value=9e-10 Score=116.17 Aligned_cols=120 Identities=13% Similarity=0.150 Sum_probs=88.7
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCE----EEeeccCC------------------CC--------CC-cHHHHHHHHcCC
Q 011007 162 AELVIFSAMDSLLQKTGLKPKDIDI----LIVNCSLF------------------SP--------TP-SLSAMVINKYKL 210 (496)
Q Consensus 162 a~~la~~Aa~~aL~~agi~p~dID~----LI~~ss~~------------------~~--------~P-s~a~~I~~~Lgl 210 (496)
..+|+..|++++|+++|+++++||. +++.++.. .. .+ ..+..|...+|+
T Consensus 71 ~~~l~~~aa~~Al~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl 150 (407)
T TIGR03150 71 FIQYALAAAKEAVEDSGLDIEEEDAERVGVIIGSGIGGLETIEEQHIVLLEKGPRRVSPFFIPMSIINMAAGQISIRYGA 150 (407)
T ss_pred HHHHHHHHHHHHHHhcCCCcccCCccceEEEEecCCCchHHHHHHHHHHHhcCccccChhhhhcccccHHHHHHHHHhCC
Confidence 4679999999999999999998886 55544211 00 11 245678889999
Q ss_pred CCCceeeEecCCCcchHHHHHHHHHHHHhcCCCCEEEEEEECCCCCC-----------C--cc--------CCCcccccc
Q 011007 211 RSNIKSFNLSGMGCSAGLISIDLARDLLQVHPNSNAVVVSTEIITPN-----------Y--YQ--------GNERAMLLP 269 (496)
Q Consensus 211 ~~~~~~~dl~g~gCsg~l~al~lA~~lL~~~~~~~aLVVs~E~~s~~-----------~--~~--------~~dr~~l~~ 269 (496)
+ -.++.+. .+|++++.||..|..+|++|..+.+||++.|..... + +. +-|+. -.
T Consensus 151 ~--g~~~~v~-~acaSg~~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~--~~ 225 (407)
T TIGR03150 151 K--GPNHAVV-TACATGTHAIGDAFRLIQRGDADVMIAGGAEAAITPLGIAGFAAMKALSTRNDDPEKASRPFDKD--RD 225 (407)
T ss_pred C--Ccccccc-cHHHHHHHHHHHHHHHHhcCCCCEEEEecccCcCCHHHHHHHHHhCcccCCCCCCCcCCCCCcCC--CC
Confidence 5 4788899 599999999999999999999999999999963310 0 00 00111 02
Q ss_pred ccccccccEEEEEeccC
Q 011007 270 NCLFRMGGAAILLSNRR 286 (496)
Q Consensus 270 ~~lfgDGAaA~lLs~~~ 286 (496)
.++.||||+|+||++.+
T Consensus 226 g~~~gEGAaalvL~~~~ 242 (407)
T TIGR03150 226 GFVMGEGAGVLVLEELE 242 (407)
T ss_pred cEEEeceEEEEEEeeHH
Confidence 46789999999999765
No 61
>PRK06445 acetyl-CoA acetyltransferase; Provisional
Probab=99.22 E-value=6.3e-10 Score=117.29 Aligned_cols=91 Identities=20% Similarity=0.369 Sum_probs=77.1
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEeeccC-CCC---CCcHHHHHHHHcCCCCCceeeEecCCCcchHHHHHHHHHHH
Q 011007 162 AELVIFSAMDSLLQKTGLKPKDIDILIVNCSL-FSP---TPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDL 237 (496)
Q Consensus 162 a~~la~~Aa~~aL~~agi~p~dID~LI~~ss~-~~~---~Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~l 237 (496)
+.+|+.+|++++|+++|++|+|||.+|+++.. ++. .++....+...++ .++++++++ ++|++++.++..|.++
T Consensus 32 ~~~L~~~a~~~AL~~agl~~~dID~vi~g~~~~~~~~~~~~~~~~~l~a~~~--~~~p~~~V~-~~CaSg~~ai~~A~~~ 108 (394)
T PRK06445 32 PEELAAMLINRLIEKTGIKPEEIDDIITGCALQVGENWLYGGRHPIFLARLP--YNIPAMAVD-RQCASSLTTVSIGAME 108 (394)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCeeEEEeecCCCcccccHHHHHHHHcCCC--CCCcchhhh-hhhHHHHHHHHHHHHH
Confidence 68999999999999999999999999988753 332 2344445566665 468999999 6999999999999999
Q ss_pred HhcCCCCEEEEEEECCCC
Q 011007 238 LQVHPNSNAVVVSTEIIT 255 (496)
Q Consensus 238 L~~~~~~~aLVVs~E~~s 255 (496)
+++|..+++||+++|.+|
T Consensus 109 I~sG~~d~vLv~G~e~ms 126 (394)
T PRK06445 109 IATGMADIVIAGGVEHMT 126 (394)
T ss_pred HHcCCCCEEEEeeecccc
Confidence 999999999999999766
No 62
>PRK06025 acetyl-CoA acetyltransferase; Provisional
Probab=99.19 E-value=8e-10 Score=116.44 Aligned_cols=94 Identities=18% Similarity=0.238 Sum_probs=86.7
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEeeccCCCC--CCcHHHHHHHHcCCCCCceeeEecCCCcchHHHHHHHHHHHHh
Q 011007 162 AELVIFSAMDSLLQKTGLKPKDIDILIVNCSLFSP--TPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLLQ 239 (496)
Q Consensus 162 a~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~--~Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL~ 239 (496)
+.+|+..+++.+|++++++|++||-||+.|..... .+.++.++.-+-|++.+++++.++ +-|++++.|+.+|.+.++
T Consensus 29 ~~~L~~~~~~~~l~r~~i~~~~id~vi~G~~~~~g~~g~n~aR~~al~aglp~~vp~~tvn-r~C~Sgl~ai~~aa~~I~ 107 (417)
T PRK06025 29 PQHLAATVLKALAERNGLNTADVDDIIWSTSSQRGKQGGDLGRMAALDAGYDIKASGVTLD-RFCGGGITSVNLAAAQIM 107 (417)
T ss_pred HHHHHHHHHHHHHHhcCCCHHHCCEEEEEcCCCcCcccCcHHHHHHHhCCCCCCCCeeeec-cccchHHHHHHHHHHHHH
Confidence 78999999999999999999999999999864322 377889999999999899999999 899999999999999999
Q ss_pred cCCCCEEEEEEECCCCC
Q 011007 240 VHPNSNAVVVSTEIITP 256 (496)
Q Consensus 240 ~~~~~~aLVVs~E~~s~ 256 (496)
+|..+-+|+.+.|.+|+
T Consensus 108 ~G~~~~~laGG~EsmS~ 124 (417)
T PRK06025 108 SGMEDLVIAGGTEMMSY 124 (417)
T ss_pred cCCCCEEEEeeeeccCC
Confidence 99999999999999996
No 63
>PRK06690 acetyl-CoA acetyltransferase; Provisional
Probab=99.16 E-value=1.6e-09 Score=112.68 Aligned_cols=90 Identities=17% Similarity=0.213 Sum_probs=77.4
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCCceeeEecCCCcchHHHHHHHHHHHHhcC
Q 011007 162 AELVIFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLLQVH 241 (496)
Q Consensus 162 a~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL~~~ 241 (496)
+.+|+..|++++++ |++ +|||.+|+.+.... .+..+..+....|++..++++.++ .+|++++.|+..|.+.+++|
T Consensus 25 ~~~L~~~a~~~~~~--gi~-~~Id~vi~G~~~~~-~~~~~r~~~~~~Gl~~~~p~~tV~-~~CaSG~~Ai~~a~~~I~sG 99 (361)
T PRK06690 25 VQQLAAPLLTFLSK--GME-REIDDVILGNVVGP-GGNVARLSALEAGLGLHIPGVTID-RQCGAGLEAIRTACHFIQGG 99 (361)
T ss_pred HHHHHHHHHHHHHc--cch-hhcCEEEEEecCCC-cchHHHHHHHHcCCCCCCCceehh-hhhhHHHHHHHHHHHHHHCC
Confidence 68999999999866 896 89999999865321 244455688999998679999999 69999999999999999999
Q ss_pred CCCEEEEEEECCCCC
Q 011007 242 PNSNAVVVSTEIITP 256 (496)
Q Consensus 242 ~~~~aLVVs~E~~s~ 256 (496)
..+.+||++.|.+|.
T Consensus 100 ~~d~~l~gG~E~ms~ 114 (361)
T PRK06690 100 AGKCYIAGGVESTST 114 (361)
T ss_pred CCCEEEEeccccccC
Confidence 999999999999874
No 64
>PRK06158 thiolase; Provisional
Probab=99.15 E-value=3.6e-09 Score=111.20 Aligned_cols=87 Identities=18% Similarity=0.064 Sum_probs=74.9
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCCceeeEecCCCcchHHHHHHHHHHHHhcC
Q 011007 162 AELVIFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLLQVH 241 (496)
Q Consensus 162 a~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL~~~ 241 (496)
..+|+.+|++++|+++|++++|||.+|+++. +...|+ ..+++++|++ ..+++++. .||+++..++..|..++++|
T Consensus 28 ~~eL~~eA~~~Al~dAgl~~~dID~iv~~~~-~~~~~~--~~la~~lGl~-~~~~~~~~-~g~~s~~~al~~A~~~I~sG 102 (384)
T PRK06158 28 AMELLAQAAHRALADAGLTMADVDGLFTASP-DDALWG--LSVAEYLGIR-PRFVDGTM-IGGSSFLAHLLPAALALEAG 102 (384)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEecC-CCCCcH--HHHHHHcCCC-Ceeecccc-CccHHHHHHHHHHHHHHHcC
Confidence 5789999999999999999999999998753 333444 5799999997 57889998 69999999999999999999
Q ss_pred CCCEEEEE-EECC
Q 011007 242 PNSNAVVV-STEI 253 (496)
Q Consensus 242 ~~~~aLVV-s~E~ 253 (496)
..++|||+ +.|.
T Consensus 103 ~~d~vLV~~g~~~ 115 (384)
T PRK06158 103 LCDVALICYGSNQ 115 (384)
T ss_pred CCCEEEEeecccc
Confidence 99999998 4443
No 65
>PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.15 E-value=7.1e-09 Score=109.73 Aligned_cols=120 Identities=13% Similarity=0.137 Sum_probs=89.3
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcC----EEEeeccCC----------------------C----CCC-cHHHHHHHHcCC
Q 011007 162 AELVIFSAMDSLLQKTGLKPKDID----ILIVNCSLF----------------------S----PTP-SLSAMVINKYKL 210 (496)
Q Consensus 162 a~~la~~Aa~~aL~~agi~p~dID----~LI~~ss~~----------------------~----~~P-s~a~~I~~~Lgl 210 (496)
...|+..|++++|+++|++++++| .++++++.. . ..+ ..+..|...+|+
T Consensus 72 ~~~l~~~aa~~Al~dAGl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl 151 (411)
T PRK07314 72 FIQYGIAAAKQAVEDAGLEITEENADRIGVIIGSGIGGLETIEEQHITLLEKGPRRVSPFFVPMAIINMAAGHVSIRYGA 151 (411)
T ss_pred HHHHHHHHHHHHHHHcCCCcccCCcccEEEEEecCcCChHHHHHHHHHHHhcCccccChhhhhhhcchHHHHHHHHHhCC
Confidence 567999999999999999998888 455554311 0 111 245678999999
Q ss_pred CCCceeeEecCCCcchHHHHHHHHHHHHhcCCCCEEEEEEECCCCCCC---------------------ccCCCcccccc
Q 011007 211 RSNIKSFNLSGMGCSAGLISIDLARDLLQVHPNSNAVVVSTEIITPNY---------------------YQGNERAMLLP 269 (496)
Q Consensus 211 ~~~~~~~dl~g~gCsg~l~al~lA~~lL~~~~~~~aLVVs~E~~s~~~---------------------~~~~dr~~l~~ 269 (496)
+. .++.++ .+|++++.||..|.++|++|..+.|||.+.|..+..+ ..+-|+. -.
T Consensus 152 ~G--p~~tv~-~acaSgl~Al~~A~~~I~~G~~d~vlvgg~~~~~~~~~~~~~~~~~~ls~~~~~p~~~~~pfd~~--~d 226 (411)
T PRK07314 152 KG--PNHSIV-TACATGAHAIGDAARLIAYGDADVMVAGGAEAAITPLGIAGFAAARALSTRNDDPERASRPFDKD--RD 226 (411)
T ss_pred CC--ccccch-hhhHHHHHHHHHHHHHHhcCCCCEEEEeeecccCCHHHHHHHHHhccccCCCCCCCcCcCCCcCC--CC
Confidence 63 678888 5999999999999999999999999999999743210 0000111 02
Q ss_pred ccccccccEEEEEeccC
Q 011007 270 NCLFRMGGAAILLSNRR 286 (496)
Q Consensus 270 ~~lfgDGAaA~lLs~~~ 286 (496)
.+++||||+|+||++.+
T Consensus 227 G~~~geGAaavvL~~~~ 243 (411)
T PRK07314 227 GFVMGEGAGILVLEELE 243 (411)
T ss_pred CEeEEceEEEEEEeeHH
Confidence 57899999999999764
No 66
>TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases. This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatt
Probab=99.14 E-value=1.9e-10 Score=120.96 Aligned_cols=94 Identities=19% Similarity=0.262 Sum_probs=84.8
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEeecc-CCCCCCcHHHHHHHHcCCCCCceeeEecCCCcchHHHHHHHHHHHHhc
Q 011007 162 AELVIFSAMDSLLQKTGLKPKDIDILIVNCS-LFSPTPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLLQV 240 (496)
Q Consensus 162 a~~la~~Aa~~aL~~agi~p~dID~LI~~ss-~~~~~Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL~~ 240 (496)
..+|+.+|++++|+++|++++|||.+|+++. +++..|..+..++..+|++.++++++++ .+|++++.++..|.+++++
T Consensus 21 ~~~La~~A~~~Al~dAgl~~~dID~vv~g~~~~~~~~~~~a~~va~~lGl~~~~~~~~v~-~~Casg~~al~~A~~~I~s 99 (386)
T TIGR01930 21 AEDLGAAVIKELLERNPLDPELIDDVIFGNVLQAGEQQNIARQAALLAGLPESVPAYTVN-RQCASGLQAVILAAQLIRA 99 (386)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCceeeeec-chhhHHHHHHHHHHHHHHC
Confidence 6899999999999999999999999998764 4454577788899999998568999999 6999999999999999999
Q ss_pred CCCCEEEEEEECCCCC
Q 011007 241 HPNSNAVVVSTEIITP 256 (496)
Q Consensus 241 ~~~~~aLVVs~E~~s~ 256 (496)
|..+++||+++|.+|.
T Consensus 100 G~~~~vLv~g~e~~s~ 115 (386)
T TIGR01930 100 GEADVVVAGGVESMSR 115 (386)
T ss_pred CCCCEEEEEEehhhcc
Confidence 9999999999998775
No 67
>PRK07108 acetyl-CoA acetyltransferase; Provisional
Probab=99.14 E-value=2.4e-10 Score=120.33 Aligned_cols=94 Identities=17% Similarity=0.244 Sum_probs=86.0
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEeecc-CCCCCCc-HHHHHHHHcCCCCCceeeEecCCCcchHHHHHHHHHHHHh
Q 011007 162 AELVIFSAMDSLLQKTGLKPKDIDILIVNCS-LFSPTPS-LSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLLQ 239 (496)
Q Consensus 162 a~~la~~Aa~~aL~~agi~p~dID~LI~~ss-~~~~~Ps-~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL~ 239 (496)
+.+|+..|++++|+++|++|+|||.+|+++. ++...|+ .+..+..++|++.++++++++ ++|++|+.|+.+|..+++
T Consensus 27 ~~dL~~~A~~~aL~~agi~~~~ID~vi~G~~~~~~~~~~~~a~~i~~~lGl~~~~p~~~V~-~aCaSg~~Al~~A~~~I~ 105 (392)
T PRK07108 27 GATLGGHVVQHAVERAKLDPAEVEDVIMGCANPEGATGANIARQIALRAGLPVTVPGMTVN-RFCSSGLQTIALAAQRVI 105 (392)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCcEEEEEeecccccccHHHHHHHHHcCCCCCCceeeec-chhhHHHHHHHHHHHHHH
Confidence 6899999999999999999999999999875 4555554 888999999998779999999 699999999999999999
Q ss_pred cCCCCEEEEEEECCCCC
Q 011007 240 VHPNSNAVVVSTEIITP 256 (496)
Q Consensus 240 ~~~~~~aLVVs~E~~s~ 256 (496)
+|..+.+|+++.|.+|.
T Consensus 106 sG~~d~vlagGvE~ms~ 122 (392)
T PRK07108 106 AGEGDVFVAGGVESISC 122 (392)
T ss_pred CCCCCEEEEEEEeccCC
Confidence 99999999999999985
No 68
>PRK07103 polyketide beta-ketoacyl:acyl carrier protein synthase; Validated
Probab=99.07 E-value=9.9e-09 Score=108.79 Aligned_cols=121 Identities=13% Similarity=0.241 Sum_probs=87.3
Q ss_pred HHHHHHHHHHHHHHHcCCC---cCCcCEEEeecc----------------CCCCCC---------cHHHHHHHHcCCCCC
Q 011007 162 AELVIFSAMDSLLQKTGLK---PKDIDILIVNCS----------------LFSPTP---------SLSAMVINKYKLRSN 213 (496)
Q Consensus 162 a~~la~~Aa~~aL~~agi~---p~dID~LI~~ss----------------~~~~~P---------s~a~~I~~~Lgl~~~ 213 (496)
...++..|++++|+++|++ +++|++++-++. +.+..| ..+..|+..||++
T Consensus 80 ~~~lal~Aa~eAl~dAgl~~~~~~riGvivG~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl~-- 157 (410)
T PRK07103 80 SAQAALAAAREAWRDAALGPVDPDRIGLVVGGSNLQQREQALVHETYRDRPAFLRPSYGLSFMDTDLVGLCSEQFGIR-- 157 (410)
T ss_pred HHHHHHHHHHHHHHhcCcCCCCCCCEEEEEccCCcchHHHHHHHHHhccCccccChhhhhhhcchHHHHHHHHHhCCC--
Confidence 5679999999999999986 467777664432 111122 2566788999996
Q ss_pred ceeeEecCCCcchHHHHHHHHHHHHhcCCCCEEEEEEECC-CCCC----------------------CccCCCccccccc
Q 011007 214 IKSFNLSGMGCSAGLISIDLARDLLQVHPNSNAVVVSTEI-ITPN----------------------YYQGNERAMLLPN 270 (496)
Q Consensus 214 ~~~~dl~g~gCsg~l~al~lA~~lL~~~~~~~aLVVs~E~-~s~~----------------------~~~~~dr~~l~~~ 270 (496)
-+++.+++ +|++++.||..|.++|+++..+.+||+++|. .+.. ...+-|+. -..
T Consensus 158 G~~~tv~~-acas~~~Al~~A~~~I~~G~~d~~lv~g~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~rPfd~~--~dG 234 (410)
T PRK07103 158 GEGFTVGG-ASASGQLAVIQAARLVQSGSVDACIAVGALMDLSYWECQALRSLGAMGSDRFADEPEAACRPFDQD--RDG 234 (410)
T ss_pred CCcccccc-hhHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHccccccCccCCCcccCcCCCCCC--CCC
Confidence 36888994 9999999999999999999999999999864 2110 00000111 025
Q ss_pred cccccccEEEEEeccCC
Q 011007 271 CLFRMGGAAILLSNRRR 287 (496)
Q Consensus 271 ~lfgDGAaA~lLs~~~~ 287 (496)
.++||||+|+||++.+.
T Consensus 235 ~v~gEGaaalvLe~~~~ 251 (410)
T PRK07103 235 FIYGEACGAVVLESAES 251 (410)
T ss_pred eeEeeeEEEEEEccHHH
Confidence 78999999999997543
No 69
>PRK08256 lipid-transfer protein; Provisional
Probab=99.07 E-value=1.1e-08 Score=107.71 Aligned_cols=89 Identities=17% Similarity=0.186 Sum_probs=76.3
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEeeccC-CCCCCcHHHHHHHHcCCCCCceeeEecCCCcchHHHHHHHHHHHHhc
Q 011007 162 AELVIFSAMDSLLQKTGLKPKDIDILIVNCSL-FSPTPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLLQV 240 (496)
Q Consensus 162 a~~la~~Aa~~aL~~agi~p~dID~LI~~ss~-~~~~Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL~~ 240 (496)
..+|+..|++++|+++|++++|||.+++.+.. +... ...+...+|++ ++++++++ .+|++++.+|..|.++|++
T Consensus 22 ~~~La~~A~~~Al~dAGl~~~dID~~~~g~~~~~~~~---~~~~~~~lGl~-~~~~~~v~-~~caSg~~ai~~A~~~I~s 96 (391)
T PRK08256 22 YPDMAAEAGRAALADAGIDYDAVQQAYVGYVYGDSTS---GQRALYEVGMT-GIPIVNVN-NNCSTGSTALFLARQAVRS 96 (391)
T ss_pred HHHHHHHHHHHHHHHcCCChHHCCeeEEEEEeCCcch---hHHHHHHcCCC-CCCCcccc-cccHHHHHHHHHHHHHHHC
Confidence 57899999999999999999999999877543 2211 23467789996 67889999 6999999999999999999
Q ss_pred CCCCEEEEEEECCCC
Q 011007 241 HPNSNAVVVSTEIIT 255 (496)
Q Consensus 241 ~~~~~aLVVs~E~~s 255 (496)
|..+++||+++|..|
T Consensus 97 G~~d~vLv~g~e~~s 111 (391)
T PRK08256 97 GAADCALALGFEQMQ 111 (391)
T ss_pred CCCCEEEEEEEeecc
Confidence 999999999999876
No 70
>PRK06205 acetyl-CoA acetyltransferase; Provisional
Probab=99.06 E-value=5.4e-10 Score=118.15 Aligned_cols=94 Identities=19% Similarity=0.292 Sum_probs=86.5
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEeecc-CCCCCCcHHHHHHHHcCCCCCceeeEecCCCcchHHHHHHHHHHHHhc
Q 011007 162 AELVIFSAMDSLLQKTGLKPKDIDILIVNCS-LFSPTPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLLQV 240 (496)
Q Consensus 162 a~~la~~Aa~~aL~~agi~p~dID~LI~~ss-~~~~~Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL~~ 240 (496)
..+|+.+|++++|+++|++|+|||.+|++|+ +....|..+..++..+|++.++++++++ .+|++++.++..|.+++++
T Consensus 26 ~~eLa~~A~~~AL~~agl~~~dID~vv~g~~~~~~~~~~~a~~va~~~Gl~~~~p~~~V~-~~CaSg~~Al~~A~~~I~s 104 (404)
T PRK06205 26 AEELAATVIRALVERTGIDPARIDDVIFGQGYPNGEAPAIGRVAALDAGLPVTVPGMQLD-RRCGSGLQAVITAAMQVQT 104 (404)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCCceeehh-hhhhHHHHHHHHHHHHHHc
Confidence 6899999999999999999999999999875 4566688888999999998678999999 6999999999999999999
Q ss_pred CCCCEEEEEEECCCCC
Q 011007 241 HPNSNAVVVSTEIITP 256 (496)
Q Consensus 241 ~~~~~aLVVs~E~~s~ 256 (496)
|..+.+||++.|.+|.
T Consensus 105 G~~d~vLv~G~E~ms~ 120 (404)
T PRK06205 105 GAADVVIAGGAESMSN 120 (404)
T ss_pred CCCCEEEEeeehhhcc
Confidence 9999999999999885
No 71
>PLN02644 acetyl-CoA C-acetyltransferase
Probab=99.06 E-value=1.5e-08 Score=106.99 Aligned_cols=93 Identities=16% Similarity=0.166 Sum_probs=79.6
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEeeccCC-CCCCcHHHHHHHHcCCCCCceeeEecCCCcchHHHHHHHHHHHHhc
Q 011007 162 AELVIFSAMDSLLQKTGLKPKDIDILIVNCSLF-SPTPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLLQV 240 (496)
Q Consensus 162 a~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~-~~~Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL~~ 240 (496)
+.+|+.+|++++|+++|++++|||.+|+.+... ...+..+..+...+|++.+++++.++ .+|+++..++..|.+.+++
T Consensus 25 ~~~L~~~a~~~al~dAgl~~~~ID~vv~g~~~~~~~~~~~~~~~~~~~Gl~~~~p~~~v~-~~caSg~~av~~Aa~~I~s 103 (394)
T PLN02644 25 ATELGSIAIQAALERAGVDPALVQEVFFGNVLSANLGQAPARQAALGAGLPPSTICTTVN-KVCASGMKAVMLAAQSIQL 103 (394)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCcCCcCCcHHHHHHHhcCCCCCCceEEEe-ccchHHHHHHHHHHHHHHc
Confidence 578999999999999999999999999865421 21334556788999997668899999 5999999999999999999
Q ss_pred CCCCEEEEEEECCCC
Q 011007 241 HPNSNAVVVSTEIIT 255 (496)
Q Consensus 241 ~~~~~aLVVs~E~~s 255 (496)
|..+.+||++.|.+|
T Consensus 104 G~~d~vlv~G~E~~s 118 (394)
T PLN02644 104 GINDVVVAGGMESMS 118 (394)
T ss_pred CCCCEEEEEeEEecC
Confidence 999999999988765
No 72
>PRK08235 acetyl-CoA acetyltransferase; Provisional
Probab=99.05 E-value=6.7e-10 Score=116.99 Aligned_cols=94 Identities=16% Similarity=0.200 Sum_probs=83.0
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEeeccCC-CCCCcHHHHHHHHcCCCCCceeeEecCCCcchHHHHHHHHHHHHhc
Q 011007 162 AELVIFSAMDSLLQKTGLKPKDIDILIVNCSLF-SPTPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLLQV 240 (496)
Q Consensus 162 a~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~-~~~Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL~~ 240 (496)
+.+|+.+|++++|+++|++|+|||.+|++|... ...+..+..++..+|++.++++++++ .+|++|+.|+..|..++++
T Consensus 26 ~~eLa~~A~~~aL~~agl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~Gl~~~~p~~~V~-~~CaSg~~Al~~A~~~I~s 104 (393)
T PRK08235 26 ATELGGIAIKEALERANVSAEDVEEVIMGTVLQGGQGQIPSRQAARAAGIPWEVQTETVN-KVCASGLRAVTLADQIIRA 104 (393)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCCCCCHHHHHHHHcCCCCCcceeehh-hhhhHHHHHHHHHHHHHHC
Confidence 689999999999999999999999999987532 12344556789999997679999999 6999999999999999999
Q ss_pred CCCCEEEEEEECCCCC
Q 011007 241 HPNSNAVVVSTEIITP 256 (496)
Q Consensus 241 ~~~~~aLVVs~E~~s~ 256 (496)
|..+++||+++|.+|.
T Consensus 105 G~~d~vLvvG~E~ms~ 120 (393)
T PRK08235 105 GDASVIVAGGMESMSN 120 (393)
T ss_pred CCCCEEEEEeeecccc
Confidence 9999999999999885
No 73
>PRK08242 acetyl-CoA acetyltransferase; Validated
Probab=99.04 E-value=9.6e-10 Score=115.93 Aligned_cols=94 Identities=13% Similarity=0.263 Sum_probs=83.3
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEeeccC-CCCC-CcHHHHHHHHcCCCCCceeeEecCCCcchHHHHHHHHHHHHh
Q 011007 162 AELVIFSAMDSLLQKTGLKPKDIDILIVNCSL-FSPT-PSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLLQ 239 (496)
Q Consensus 162 a~~la~~Aa~~aL~~agi~p~dID~LI~~ss~-~~~~-Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL~ 239 (496)
+.+|+..|++++|+++|++|+|||.+|++|.. .... +..+.......|++.++++++++ ++|++|+.|+.+|.++++
T Consensus 28 ~~dLa~~A~~~al~~agi~p~~ID~vi~G~~~~~~~~~~~~~r~a~~~~Gl~~~~pa~~Vn-~aCaSg~~Ai~~A~~~I~ 106 (402)
T PRK08242 28 PVRLAAGLLEALRDRNGLDTAAVDDVVLGCVTPVGDQGADIARTAVLAAGLPETVPGVQIN-RFCASGLEAVNLAAAKVR 106 (402)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCCCccccccHHHHHHHHcCCCCCCCeEEEc-chhhhHHHHHHHHHHHHH
Confidence 78999999999999999999999999998754 3333 34556666888997679999999 699999999999999999
Q ss_pred cCCCCEEEEEEECCCCC
Q 011007 240 VHPNSNAVVVSTEIITP 256 (496)
Q Consensus 240 ~~~~~~aLVVs~E~~s~ 256 (496)
+|..+++||+++|.+|.
T Consensus 107 sG~~d~vLv~G~E~mS~ 123 (402)
T PRK08242 107 SGWDDLVIAGGVESMSR 123 (402)
T ss_pred cCCCCEEEEEEEEccCC
Confidence 99999999999999996
No 74
>PRK08722 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.03 E-value=5.4e-08 Score=103.34 Aligned_cols=120 Identities=14% Similarity=0.166 Sum_probs=86.9
Q ss_pred HHHHHHHHHHHHHHHcCCCcCC-----cCEEEeeccC-C-----------------CC--------CC-cHHHHHHHHcC
Q 011007 162 AELVIFSAMDSLLQKTGLKPKD-----IDILIVNCSL-F-----------------SP--------TP-SLSAMVINKYK 209 (496)
Q Consensus 162 a~~la~~Aa~~aL~~agi~p~d-----ID~LI~~ss~-~-----------------~~--------~P-s~a~~I~~~Lg 209 (496)
...++..|+.++|+++|+++++ ++++ +.++. . .. .| ..+..|...+|
T Consensus 74 ~~~~~l~a~~~Al~dAGl~~~~~~~~r~Gv~-vGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~g 152 (414)
T PRK08722 74 FIQYGIAAGIQALDDSGLEVTEENAHRIGVA-IGSGIGGLGLIEAGHQALVEKGPRKVSPFFVPSTIVNMIAGNLSIMRG 152 (414)
T ss_pred HHHHHHHHHHHHHHHcCCCccccCCCCEEEE-EeeCCCcchhHHHHHHHHHhcCcccCCchhcccccccHHHHHHHHHhC
Confidence 4568899999999999987543 4444 44321 0 01 12 36788999999
Q ss_pred CCCCceeeEecCCCcchHHHHHHHHHHHHhcCCCCEEEEEEECCCCCCC----------cc-----------CCCccccc
Q 011007 210 LRSNIKSFNLSGMGCSAGLISIDLARDLLQVHPNSNAVVVSTEIITPNY----------YQ-----------GNERAMLL 268 (496)
Q Consensus 210 l~~~~~~~dl~g~gCsg~l~al~lA~~lL~~~~~~~aLVVs~E~~s~~~----------~~-----------~~dr~~l~ 268 (496)
++. +++.++ .+|++++.||..|.++|+.|..+.+||.++|.....+ .. +-|+..
T Consensus 153 l~G--p~~ti~-~aCas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~f~~~~~ls~~~~~p~~~~rpfd~~~-- 227 (414)
T PRK08722 153 LRG--PNIAIS-TACTTGLHNIGHAARMIAYGDADAMVAGGAEKASTPLGMAGFGAAKALSTRNDEPQKASRPWDKDR-- 227 (414)
T ss_pred CCC--Cccccc-cccHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHcCCcccCCCCCccccCcCcCCC--
Confidence 974 788899 5999999999999999999999999999999854210 00 001110
Q ss_pred cccccccccEEEEEeccCC
Q 011007 269 PNCLFRMGGAAILLSNRRR 287 (496)
Q Consensus 269 ~~~lfgDGAaA~lLs~~~~ 287 (496)
..++.|||++|+||++.+.
T Consensus 228 ~G~~~gEGaaalvLe~~~~ 246 (414)
T PRK08722 228 DGFVLGDGAGMMVLEEYEH 246 (414)
T ss_pred CceEeeceEEEEEEccHHH
Confidence 2567899999999997543
No 75
>PRK06333 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.02 E-value=2.8e-08 Score=105.75 Aligned_cols=120 Identities=18% Similarity=0.217 Sum_probs=86.6
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCc-C----EEEeeccCC----------------------CCCC-----cHHHHHHHHcC
Q 011007 162 AELVIFSAMDSLLQKTGLKPKDI-D----ILIVNCSLF----------------------SPTP-----SLSAMVINKYK 209 (496)
Q Consensus 162 a~~la~~Aa~~aL~~agi~p~dI-D----~LI~~ss~~----------------------~~~P-----s~a~~I~~~Lg 209 (496)
...++..|++++|+++|++++++ + .+++.++.. +..| ..+..|...||
T Consensus 82 ~~~l~~~aa~~Al~dAgl~~~~~~~~~~~Gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~g 161 (424)
T PRK06333 82 FILFAMAAAKEALAQAGWDPDTLEDRERTATIIGSGVGGFPAIAEAVRTLDSRGPRRLSPFTIPSFLTNMAAGHVSIRYG 161 (424)
T ss_pred HHHHHHHHHHHHHHhcCCCccccCCcccEEEEEecCcccHHHHHHHHHHHHhcCCcccChhHHhhhhhhHHHHHHHHHhC
Confidence 56789999999999999987766 2 344444311 0011 23667889999
Q ss_pred CCCCceeeEecCCCcchHHHHHHHHHHHHhcCCCCEEEEEEECCCCCCC----------cc------------CCCcccc
Q 011007 210 LRSNIKSFNLSGMGCSAGLISIDLARDLLQVHPNSNAVVVSTEIITPNY----------YQ------------GNERAML 267 (496)
Q Consensus 210 l~~~~~~~dl~g~gCsg~l~al~lA~~lL~~~~~~~aLVVs~E~~s~~~----------~~------------~~dr~~l 267 (496)
++ -+++.++ .+|++++.||..|.++|++|..+.+||+++|.....+ +. +-|+..
T Consensus 162 l~--Gp~~~v~-~aCaSg~~Al~~A~~~I~~G~~d~alvgG~e~~~~~~~~~~f~~~~~l~~~~~~~p~~~~~Pfd~~~- 237 (424)
T PRK06333 162 FK--GPLGAPV-TACAAGVQAIGDAARLIRSGEADVAVCGGTEAAIDRVSLAGFAAARALSTRFNDAPEQASRPFDRDR- 237 (424)
T ss_pred CC--CCCcccc-chhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHHcccccccCCCCCCcCCCCCCCCC-
Confidence 96 4788888 5999999999999999999999999999999732100 00 001110
Q ss_pred ccccccccccEEEEEeccC
Q 011007 268 LPNCLFRMGGAAILLSNRR 286 (496)
Q Consensus 268 ~~~~lfgDGAaA~lLs~~~ 286 (496)
...+.||||+++||++.+
T Consensus 238 -~G~~~gEGaa~lvLe~~~ 255 (424)
T PRK06333 238 -DGFVMGEGAGILVIETLE 255 (424)
T ss_pred -CCeEEecceEEEEEeeHH
Confidence 246789999999999754
No 76
>PRK12578 acetyl-CoA acetyltransferase; Provisional
Probab=99.01 E-value=1.3e-09 Score=114.52 Aligned_cols=93 Identities=15% Similarity=0.215 Sum_probs=80.7
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEeeccC-CCCCCcHHHHHHHHcCCCCCceeeEecCCCcchHHHHHHHHHHHHhc
Q 011007 162 AELVIFSAMDSLLQKTGLKPKDIDILIVNCSL-FSPTPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLLQV 240 (496)
Q Consensus 162 a~~la~~Aa~~aL~~agi~p~dID~LI~~ss~-~~~~Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL~~ 240 (496)
..+|+.+|++++|+++|++++|||.+|++++. ....+..+..++..+|++ +..+++++ ++|++++.+|.+|..++++
T Consensus 21 ~~eLa~~A~~~AL~dAgi~~~dID~vi~g~~~~~~~~~~~a~~v~~~lGl~-~~~~~~v~-~~casg~~al~~A~~~I~s 98 (385)
T PRK12578 21 VQELAWESIKEALNDAGVSQTDIELVVVGSTAYRGIELYPAPIVAEYSGLT-GKVPLRVE-AMCATGLAASLTAYTAVAS 98 (385)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccccccCChHHHHHHHhCCC-CCCeeEEe-ccCHHHHHHHHHHHHHHHC
Confidence 57899999999999999999999999988653 222233468899999998 56789999 6999999999999999999
Q ss_pred CCCCEEEEEEECCCCC
Q 011007 241 HPNSNAVVVSTEIITP 256 (496)
Q Consensus 241 ~~~~~aLVVs~E~~s~ 256 (496)
|..+++|||++|.+|.
T Consensus 99 G~~~~vLvvg~e~~s~ 114 (385)
T PRK12578 99 GLVDMAIAVGVDKMTE 114 (385)
T ss_pred CCCCEEEEEEEeeccc
Confidence 9999999999998763
No 77
>PRK06059 lipid-transfer protein; Provisional
Probab=99.00 E-value=1.4e-09 Score=114.82 Aligned_cols=93 Identities=15% Similarity=0.118 Sum_probs=82.1
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEeeccC--CCCCCcHHHHHHHHcCCCCCceeeEecCCCcchHHHHHHHHHHHHh
Q 011007 162 AELVIFSAMDSLLQKTGLKPKDIDILIVNCSL--FSPTPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLLQ 239 (496)
Q Consensus 162 a~~la~~Aa~~aL~~agi~p~dID~LI~~ss~--~~~~Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL~ 239 (496)
..+|+.+|++++|+++|++++|||.||++++. .+..+..+..|+.++|++ ++++++++ .+|++++.+|..|.++++
T Consensus 23 ~~~La~~A~~~Al~dAgl~~~dId~vi~~~~~~~~~~~~~~a~~va~~lG~~-~~~~~~v~-~~Casg~~al~~A~~~I~ 100 (399)
T PRK06059 23 FVEYGVVAARAALADAGLDWRDVQLVVGADTIRNGYPGFVAGATFAQALGWN-GAPVSSSY-AACASGSQALQSARAQIL 100 (399)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCccCCccHHHHHHHHhCCC-CCceeccc-chhHHHHHHHHHHHHHHH
Confidence 47899999999999999999999999987642 344456678999999997 68899999 599999999999999999
Q ss_pred cCCCCEEEEEEECCCCC
Q 011007 240 VHPNSNAVVVSTEIITP 256 (496)
Q Consensus 240 ~~~~~~aLVVs~E~~s~ 256 (496)
++..+++||+++|..|.
T Consensus 101 sG~~~~vLvvg~e~~s~ 117 (399)
T PRK06059 101 AGLCDVALVVGADTTPK 117 (399)
T ss_pred CCCCCEEEEEEEcccCC
Confidence 99999999999998763
No 78
>PRK08439 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=98.99 E-value=1.1e-07 Score=100.76 Aligned_cols=118 Identities=17% Similarity=0.234 Sum_probs=88.2
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCE----EEeeccCC--------------------------CCCC-cHHHHHHHHcCC
Q 011007 162 AELVIFSAMDSLLQKTGLKPKDIDI----LIVNCSLF--------------------------SPTP-SLSAMVINKYKL 210 (496)
Q Consensus 162 a~~la~~Aa~~aL~~agi~p~dID~----LI~~ss~~--------------------------~~~P-s~a~~I~~~Lgl 210 (496)
...++..|++++|+++|+++++++. +++.++.. ...| ..+..|...+|+
T Consensus 72 ~~~l~~~Aa~~AL~dAGl~~~~~~~~r~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl 151 (406)
T PRK08439 72 FIQLGLKAAREAMKDAGFLPEELDAERFGVSSASGIGGLPNIEKNSIICFEKGPRKISPFFIPSALVNMLGGFISIEHGL 151 (406)
T ss_pred HHHHHHHHHHHHHHHcCCCcccCCCCCEEEEEecCCccHHHHHHHHHHHHhcCccccCchhcccccccHHHHHHHHHhCC
Confidence 5789999999999999999877763 33333210 0112 467789999999
Q ss_pred CCCceeeEecCCCcchHHHHHHHHHHHHhcCCCCEEEEEEECCC-CCC---------C-----------ccC--CCcccc
Q 011007 211 RSNIKSFNLSGMGCSAGLISIDLARDLLQVHPNSNAVVVSTEII-TPN---------Y-----------YQG--NERAML 267 (496)
Q Consensus 211 ~~~~~~~dl~g~gCsg~l~al~lA~~lL~~~~~~~aLVVs~E~~-s~~---------~-----------~~~--~dr~~l 267 (496)
+. .++.+. .+|++++.||..|.++|++|..+.+||+++|.. +.. . ..+ .+|
T Consensus 152 ~G--p~~~~~-~acas~~~Al~~A~~~i~~G~~d~~lv~g~d~~l~~~~~~~f~~~~~ls~~~~~p~~~~rpfd~~~--- 225 (406)
T PRK08439 152 KG--PNLSSV-TACAAGTHAIIEAVKTIMLGGADKMLVVGAESAICPVGIGGFAAMKALSTRNDDPKKASRPFDKDR--- 225 (406)
T ss_pred CC--Cccccc-cHhHHHHHHHHHHHHHHHcCCCCEEEEecchhccCHHHHHHHHHhCccccCCCCCccCcCCccCCC---
Confidence 74 678888 599999999999999999999999999999963 210 0 000 122
Q ss_pred ccccccccccEEEEEeccC
Q 011007 268 LPNCLFRMGGAAILLSNRR 286 (496)
Q Consensus 268 ~~~~lfgDGAaA~lLs~~~ 286 (496)
...++|+||+++||++.+
T Consensus 226 -~G~v~gEGa~~lvLe~~~ 243 (406)
T PRK08439 226 -DGFVMGEGAGALVLEEYE 243 (406)
T ss_pred -CcEEeeCceEEEEEccHH
Confidence 247889999999999754
No 79
>PRK08170 acetyl-CoA acetyltransferase; Provisional
Probab=98.96 E-value=2.9e-09 Score=113.33 Aligned_cols=94 Identities=16% Similarity=0.335 Sum_probs=83.9
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEeeccC-CCCCCcHHHHHHHHcCCCCCceeeEecCCCcchHHHHHHHHHHHHhc
Q 011007 162 AELVIFSAMDSLLQKTGLKPKDIDILIVNCSL-FSPTPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLLQV 240 (496)
Q Consensus 162 a~~la~~Aa~~aL~~agi~p~dID~LI~~ss~-~~~~Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL~~ 240 (496)
+.+|+.+|++++|+++|++|+|||.+|++|.. ....+..+..++..+|++.++++++++ .+|++++.++..|..++++
T Consensus 27 ~~~L~~~A~~~Al~dAgl~~~dID~vi~g~~~~~~~~~~~a~~v~~~lGl~~~~p~~~v~-~~CaSg~~al~~A~~~I~s 105 (426)
T PRK08170 27 ASDLAVAAGRALLNRQPFAPDDLDEVILGCAMPSPDEANIARVVALRLGCGEKVPAWTVQ-RNCASGMQALDSAAANIAL 105 (426)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCcChHHHHHHHHhCcCCCceeeecc-chhhHHHHHHHHHHHHHHC
Confidence 68999999999999999999999999987643 223467788899999997578999999 5999999999999999999
Q ss_pred CCCCEEEEEEECCCCC
Q 011007 241 HPNSNAVVVSTEIITP 256 (496)
Q Consensus 241 ~~~~~aLVVs~E~~s~ 256 (496)
|..+++||+++|.+|.
T Consensus 106 G~~d~vLv~G~E~ms~ 121 (426)
T PRK08170 106 GRADLVLAGGVEAMSH 121 (426)
T ss_pred CCCCEEEEEEEecccC
Confidence 9999999999998875
No 80
>cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=98.94 E-value=3.7e-09 Score=111.45 Aligned_cols=93 Identities=13% Similarity=0.126 Sum_probs=81.5
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEeecc-CCCCCCcHHHH-HHHHcCCCCCceeeEecCCCcchHHHHHHHHHHHHh
Q 011007 162 AELVIFSAMDSLLQKTGLKPKDIDILIVNCS-LFSPTPSLSAM-VINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLLQ 239 (496)
Q Consensus 162 a~~la~~Aa~~aL~~agi~p~dID~LI~~ss-~~~~~Ps~a~~-I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL~ 239 (496)
+.+|+..|++++|++++++|+|||.+|++++ +++..+..+.. +++.+|+. ++++++++ .+|++|+.++..|..+++
T Consensus 23 ~~el~~~a~~~Al~~agl~p~dID~vi~g~~~~~~~g~~~~~~~~~~~lg~~-~~p~~~V~-~~Casg~~al~~A~~~I~ 100 (393)
T cd00826 23 AHEAGAKAIAAALEPAGVAAGAVEEACLGQVLGAGEGQNCAQQAAMHAGGLQ-EAPAIGMN-NLCGSGLRALALAMQLIA 100 (393)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEEccCCcccCcHHHHHHHHcCCCC-CCcEEEec-chhHHHHHHHHHHHHHHH
Confidence 7899999999999999999999999998875 44434555553 67788886 78999999 599999999999999999
Q ss_pred cCCCCEEEEEEECCCCC
Q 011007 240 VHPNSNAVVVSTEIITP 256 (496)
Q Consensus 240 ~~~~~~aLVVs~E~~s~ 256 (496)
++..+.+||+++|.+|.
T Consensus 101 sG~~~~vlv~g~e~~s~ 117 (393)
T cd00826 101 GGDANCILAGGFEKMET 117 (393)
T ss_pred CCCCCEEEEEeeecccc
Confidence 99999999999999875
No 81
>PRK05790 putative acyltransferase; Provisional
Probab=98.92 E-value=5.3e-09 Score=110.28 Aligned_cols=94 Identities=17% Similarity=0.251 Sum_probs=80.6
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEeeccC-CCCCCcHHHHHHHHcCCCCCceeeEecCCCcchHHHHHHHHHHHHhc
Q 011007 162 AELVIFSAMDSLLQKTGLKPKDIDILIVNCSL-FSPTPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLLQV 240 (496)
Q Consensus 162 a~~la~~Aa~~aL~~agi~p~dID~LI~~ss~-~~~~Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL~~ 240 (496)
+.+|+.+|++++|+++|++|+|||.+|+++.. ....+..+..++..+|++.++.+++++ .+|++++.++..|..++++
T Consensus 26 ~~~La~~A~~~AL~dAgl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~gl~~~~~~~~v~-~~Casg~~al~~A~~~I~s 104 (393)
T PRK05790 26 AVELGAIVIKAALERAGVPPEQVDEVIMGQVLQAGAGQNPARQAALKAGLPVEVPALTIN-KVCGSGLKAVALAAQAIRA 104 (393)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCeEEEEEecCCCCCCcHHHHHHHHcCCCCCCceeeec-ccchHHHHHHHHHHHHHHc
Confidence 68999999999999999999999999987642 222344556677788997568899999 5999999999999999999
Q ss_pred CCCCEEEEEEECCCCC
Q 011007 241 HPNSNAVVVSTEIITP 256 (496)
Q Consensus 241 ~~~~~aLVVs~E~~s~ 256 (496)
|..+++||++.|.+|.
T Consensus 105 G~~d~vLv~G~e~~s~ 120 (393)
T PRK05790 105 GDADIVVAGGQESMSQ 120 (393)
T ss_pred CCCCEEEEEeeecccc
Confidence 9999999999998764
No 82
>PRK06954 acetyl-CoA acetyltransferase; Provisional
Probab=98.91 E-value=5.3e-09 Score=110.40 Aligned_cols=94 Identities=20% Similarity=0.279 Sum_probs=80.4
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEeeccC-CCCCCcHHHHHHHHcCCCCCceeeEecCCCcchHHHHHHHHHHHHhc
Q 011007 162 AELVIFSAMDSLLQKTGLKPKDIDILIVNCSL-FSPTPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLLQV 240 (496)
Q Consensus 162 a~~la~~Aa~~aL~~agi~p~dID~LI~~ss~-~~~~Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL~~ 240 (496)
+.+|+.+|++++|+++|++|+|||.+|++++. .......+......+|++.++++++++ ++|++|+.|+..|.+++++
T Consensus 31 ~~eL~~~a~~~aL~~Agi~~~dID~vi~G~~~~~~~~~~~~~~~~l~ag~~~~~p~~~V~-~aCaSG~~Av~~A~~~I~s 109 (397)
T PRK06954 31 APQLGAAAIAAAVERAGLKPEQIDEVVMGCVLPAGQGQAPARQAALGAGLPLSVGCTTVN-KMCGSGMRAAMFAHDMLVA 109 (397)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCCCccchHHHHHHHHcCCCCCCccEeecc-ccchHHHHHHHHHHHHHHC
Confidence 68999999999999999999999999998653 333334444455567777669999999 6999999999999999999
Q ss_pred CCCCEEEEEEECCCCC
Q 011007 241 HPNSNAVVVSTEIITP 256 (496)
Q Consensus 241 ~~~~~aLVVs~E~~s~ 256 (496)
|..+.+||+++|.+|.
T Consensus 110 G~~d~vLv~G~E~ms~ 125 (397)
T PRK06954 110 GSVDVIVAGGMESMTN 125 (397)
T ss_pred CCCCEEEEEeeeccCC
Confidence 9999999999999984
No 83
>PRK06065 acetyl-CoA acetyltransferase; Provisional
Probab=98.88 E-value=8.2e-09 Score=108.70 Aligned_cols=91 Identities=13% Similarity=0.119 Sum_probs=80.4
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEeeccCCCC--CCcHHHHHHHHcCCCCCceeeEecCCCcchHHHHHHHHHHHHh
Q 011007 162 AELVIFSAMDSLLQKTGLKPKDIDILIVNCSLFSP--TPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLLQ 239 (496)
Q Consensus 162 a~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~--~Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL~ 239 (496)
..+|+.+|++++|+++|++++|||.+|+++.++.. .+..+..+++.+|+. +.+++++. .||+++..++..|...++
T Consensus 29 ~~~L~~~A~~~Al~dagl~~~dID~~i~~~~~~~~~~~~~~a~~l~~~lG~~-~~~~~~V~-~~gasG~~al~~A~~~I~ 106 (392)
T PRK06065 29 PQELAWEAASKALDEAGLELKDIDCVVIGSAPDAFDGVHMKGEYLSHGSGGI-RKPVSRVY-VGGATGVMTAIAGWYHVA 106 (392)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCcccccccHHHHHHHHcCCC-CCCeEEEe-cCchhHHHHHHHHHHHHh
Confidence 57899999999999999999999999987644322 566888899999997 57899999 589889999999999999
Q ss_pred cCCCCEEEEEEECCC
Q 011007 240 VHPNSNAVVVSTEII 254 (496)
Q Consensus 240 ~~~~~~aLVVs~E~~ 254 (496)
+|..++||||++|+.
T Consensus 107 sG~ad~vLVvg~e~~ 121 (392)
T PRK06065 107 SGLCQKVLAVAEEKM 121 (392)
T ss_pred CCCCCEEEEEEeecc
Confidence 999999999999985
No 84
>PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=98.87 E-value=8.3e-07 Score=93.64 Aligned_cols=205 Identities=15% Similarity=0.085 Sum_probs=125.8
Q ss_pred CcHHHHHHHHcCCCCCceeeEecCCCcchHHHHHHHHHHHHhcCCCCEEEEEEECCCCCC--------------C-ccC-
Q 011007 198 PSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLLQVHPNSNAVVVSTEIITPN--------------Y-YQG- 261 (496)
Q Consensus 198 Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL~~~~~~~aLVVs~E~~s~~--------------~-~~~- 261 (496)
++.+..|+..||++. .++.++ .+|++++.||..|.++|++|..+.|||+++|..+.. . .+.
T Consensus 137 ~~~a~~ia~~lgl~G--p~~~i~-~acas~~~Al~~A~~~I~~G~~d~vlvgg~d~~~~~~~~~~~~~~~l~~~~~~Pfd 213 (392)
T PRK09185 137 GSLADFLRAYLGLSG--PAYTIS-TACSSSAKVFASARRLLEAGLCDAAIVGGVDSLCRLTLNGFNSLESLSPQPCRPFS 213 (392)
T ss_pred cHHHHHHHHHhCCCC--Cccccc-ChhHHHHHHHHHHHHHHHcCCCCEEEEeeccccChHHHHHHHhccccCCCccCCCc
Confidence 457888999999973 789999 599999999999999999999999999999965431 0 001
Q ss_pred CCccccccccccccccEEEEEeccCCcccccceeEeeEEEEEecCCcccccceeecccCCCceeeeechhHHHHHHHHhh
Q 011007 262 NERAMLLPNCLFRMGGAAILLSNRRRNRSRAKYRLVHVVRTHKGADDKAYRCVFEEEDKEGKVGISLSKDLMAIAGEALK 341 (496)
Q Consensus 262 ~dr~~l~~~~lfgDGAaA~lLs~~~~~~~~~~~~L~~~~~t~~~~d~~~~~~~~~~~d~~G~~g~~ls~d~~~v~g~~l~ 341 (496)
.++ ...++|||++++||++.... ..++.+ .-...|... ...+ + | .+...
T Consensus 214 ~~~----~G~~~gEGaa~vVLe~~~~~----~~~I~g---~g~~~d~~~---~~~~-~-------------~--~~~~~- 262 (392)
T PRK09185 214 ANR----DGINIGEAAAFFLLEREDDA----AVALLG---VGESSDAHH---MSAP-H-------------P--EGLGA- 262 (392)
T ss_pred CCC----CccceeceEEEEEEEEcCCC----cEEEEE---EEEeCCCCC---CCCC-C-------------C--CHHHH-
Confidence 122 25789999999999987321 223332 222233211 0000 0 0 00000
Q ss_pred hhhhhcCCCccchhHHHHHHHHHHHHhhhcc-ccCCcccchhccccEEEeccCCHHHHH-----HHHHHcCCChhhHhhh
Q 011007 342 SNITTIGPLVLPASEQLLFLMTLIGRKIFNP-KWKPYIPDFKQAFEHFCIHAGGRAVID-----ELQKNLQLSAEHVEAS 415 (496)
Q Consensus 342 ~~i~~~gp~vlp~~e~~~~~~~~~~~~v~~~-~~~~~~p~~~~did~f~~H~~~~~v~~-----~i~~~Lgl~~e~~~~S 415 (496)
....++.++. .+. .+|||++..|..+...-| .+.+.++-.. .+
T Consensus 263 ---------------------~~a~~~Al~~Agl~------~~dId~v~~hgtgt~~~D~~E~~al~~~f~~~~-pv--- 311 (392)
T PRK09185 263 ---------------------ILAMQQALADAGLA------PADIGYINLHGTATPLNDAMESRAVAAVFGDGV-PC--- 311 (392)
T ss_pred ---------------------HHHHHHHHHHcCCC------HHHccEEEeCCCCCcCCCHHHHHHHHHHhCCCC-ce---
Confidence 0011333332 232 489999999998865433 3444554221 12
Q ss_pred hhhhcccCCccCCchHHHHHHHH---HhCCCC------------------------CCCEEEEEeechhHhhhheeeEe
Q 011007 416 RMTLHRFGNTSSSSLWYEMSYIE---EKGRMK------------------------KGDRVWQIAFGSGFKCNSAVWKC 467 (496)
Q Consensus 416 ~~~l~r~GNtsSaSi~~~La~~~---~~g~i~------------------------~Gd~Vll~~fG~G~~~~sav~r~ 467 (496)
-.+=..+||+.+++-.++|.... ++|.+. +-++++.-+||.|-.-.+++++.
T Consensus 312 ~s~K~~~Gh~~~AaG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~gfgG~n~~lvl~~ 390 (392)
T PRK09185 312 SSTKGLTGHTLGAAGAVEAAICWLALRHGLPPHGWNTGQPDPALPPLYLVENAQALAIRYVLSNSFAFGGNNCSLIFGR 390 (392)
T ss_pred eCCCcccccChhhcchHHHHHHHHHHhcCCCCCCCCCCCCCCCCCccccCCCCccCCCCEEEEeCccCCceeEEEEEEe
Confidence 12334589999999777776532 333211 13567788899887777777764
No 85
>PF00108 Thiolase_N: Thiolase, N-terminal domain; InterPro: IPR020616 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2.3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 1PXT_B 1AFW_B 1WL4_A 1WL5_A 4E1L_B 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2WUA_B ....
Probab=98.86 E-value=1.1e-08 Score=102.13 Aligned_cols=94 Identities=19% Similarity=0.295 Sum_probs=83.5
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEeeccC-CCCCCcHHHHHHHHcCCCCCceeeEecCCCcchHHHHHHHHHHHHhc
Q 011007 162 AELVIFSAMDSLLQKTGLKPKDIDILIVNCSL-FSPTPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLLQV 240 (496)
Q Consensus 162 a~~la~~Aa~~aL~~agi~p~dID~LI~~ss~-~~~~Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL~~ 240 (496)
+.+|+..|++++|++++++|++||.+|+.|.. ....+..+..+.-..|++..++++.++ ..|++++.|+..|...+++
T Consensus 26 ~~~L~~~a~~~al~~~~i~~~~Id~v~~G~~~~~~~g~~~ar~~~l~aGl~~~vp~~~V~-~~CaSG~~Av~~a~~~I~s 104 (264)
T PF00108_consen 26 PEDLAAEAVKAALERAGIDPEDIDAVIVGNVLQEGEGQNIARQAALAAGLPESVPATTVN-RACASGLQAVHLAAMAIAS 104 (264)
T ss_dssp HHHHHHHHHHHHHHHHTSHGGGEEEEEEE-SSSCTTTCHHHHHHHHHTTS-TTSEEEEEE--GGGHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhcccchhhhhhcCcccccccccchhhhhhhhhhcccccccceeeeh-hhhhHHHHHHHHhhhhhcC
Confidence 78999999999999999999999999999854 344777888888899998889999999 6999999999999999999
Q ss_pred CCCCEEEEEEECCCCC
Q 011007 241 HPNSNAVVVSTEIITP 256 (496)
Q Consensus 241 ~~~~~aLVVs~E~~s~ 256 (496)
|..+.+|+++.|.+|.
T Consensus 105 G~~dvvlagGvE~mS~ 120 (264)
T PF00108_consen 105 GEADVVLAGGVESMSR 120 (264)
T ss_dssp TS-SEEEEEEEEETTT
T ss_pred CCccEEEEeccccccc
Confidence 9999999999999997
No 86
>PRK09116 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=98.85 E-value=4.8e-07 Score=95.88 Aligned_cols=119 Identities=16% Similarity=0.178 Sum_probs=85.7
Q ss_pred HHHHHHHHHHHHHHHcCCCc------CCcCEEEeeccCC------------------C--------CCC-cHHHHHHHHc
Q 011007 162 AELVIFSAMDSLLQKTGLKP------KDIDILIVNCSLF------------------S--------PTP-SLSAMVINKY 208 (496)
Q Consensus 162 a~~la~~Aa~~aL~~agi~p------~dID~LI~~ss~~------------------~--------~~P-s~a~~I~~~L 208 (496)
...++..|++++|+++|+.. ++++++ +.++.. . ..| ..+..|...+
T Consensus 73 ~~~~al~aa~~Al~dAGl~~~~~~~~~r~Gv~-~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~ 151 (405)
T PRK09116 73 VSLMATRASELALEDAGLLGDPILTDGRMGIA-YGSSTGSTDPIGAFGTMLLEGSMSGITATTYVRMMPHTTAVNVGLFF 151 (405)
T ss_pred HHHHHHHHHHHHHHHcCCCCccccCCCcEEEE-EeecccchHHHHHHHHHHhhcCccccChhhhhhhcccHHHHHHHHHh
Confidence 46789999999999999832 334444 443210 0 123 2577899999
Q ss_pred CCCCCceeeEecCCCcchHHHHHHHHHHHHhcCCCCEEEEEEECCCCCC---------------C-----ccCCCccccc
Q 011007 209 KLRSNIKSFNLSGMGCSAGLISIDLARDLLQVHPNSNAVVVSTEIITPN---------------Y-----YQGNERAMLL 268 (496)
Q Consensus 209 gl~~~~~~~dl~g~gCsg~l~al~lA~~lL~~~~~~~aLVVs~E~~s~~---------------~-----~~~~dr~~l~ 268 (496)
|++. +++.++ .+|++++.||..|.++|+.|..+.+||.++|.++.. . ..+-|+..
T Consensus 152 ~~~G--p~~ti~-~acas~~~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~f~~l~~~~~~~~~~~~~~rPfd~~~-- 226 (405)
T PRK09116 152 GLKG--RVIPTS-SACTSGSQGIGYAYEAIKYGYQTVMLAGGAEELCPTEAAVFDTLFATSTRNDAPELTPRPFDANR-- 226 (405)
T ss_pred CCCC--Cccccc-chhhhHHHHHHHHHHHHHcCCCCEEEEecchhcChHHHHHHHHhhhhccCCCCCCCCCCCCcCCC--
Confidence 9974 788999 599999999999999999999999999999975420 0 00011110
Q ss_pred cccccccccEEEEEeccC
Q 011007 269 PNCLFRMGGAAILLSNRR 286 (496)
Q Consensus 269 ~~~lfgDGAaA~lLs~~~ 286 (496)
..++.|+||+++||++.+
T Consensus 227 ~G~v~gEGa~~~vLe~~~ 244 (405)
T PRK09116 227 DGLVIGEGAGTLVLEELE 244 (405)
T ss_pred CCEeeeccEEEEEEccHH
Confidence 257889999999999754
No 87
>PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=98.83 E-value=3.1e-07 Score=96.52 Aligned_cols=243 Identities=16% Similarity=0.208 Sum_probs=144.5
Q ss_pred HHHHHHHHHHHHcCCCc--CCcCEEEeeccCC--------------------C--------CCC-cHHHHHHHHcCCCCC
Q 011007 165 VIFSAMDSLLQKTGLKP--KDIDILIVNCSLF--------------------S--------PTP-SLSAMVINKYKLRSN 213 (496)
Q Consensus 165 la~~Aa~~aL~~agi~p--~dID~LI~~ss~~--------------------~--------~~P-s~a~~I~~~Lgl~~~ 213 (496)
++..|++++|+++|+++ +++++++-++... . ..| ..+..|...+|++.
T Consensus 59 ~~~~a~~~Al~dagl~~~~~~~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~~~~~G- 137 (381)
T PRK05952 59 LTKTVVTAALKDAGLTPPLTDCGVVIGSSRGCQGQWEKLARQMYQGDDSPDEELDLENWLDTLPHQAAIAAARQIGTQG- 137 (381)
T ss_pred HHHHHHHHHHHhcCCCCCCCCEEEEEeeCcchHHHHHHHHHHHhhcCCccccccCHHHHHHhcccHHHHHHHHHhCCCC-
Confidence 56689999999999864 5566554222110 0 112 24677888999974
Q ss_pred ceeeEecCCCcchHHHHHHHHHHHHhcCCCCEEEEEEECC-CCCC---------------CccC-CCccccccccccccc
Q 011007 214 IKSFNLSGMGCSAGLISIDLARDLLQVHPNSNAVVVSTEI-ITPN---------------YYQG-NERAMLLPNCLFRMG 276 (496)
Q Consensus 214 ~~~~dl~g~gCsg~l~al~lA~~lL~~~~~~~aLVVs~E~-~s~~---------------~~~~-~dr~~l~~~~lfgDG 276 (496)
+++.+. .+|++++.||..|.++|+.+..+.+||.++|. .+.. ..+. .+| ...++|||
T Consensus 138 -p~~ti~-~aCasg~~Ai~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~rPfd~~r----~G~v~gEG 211 (381)
T PRK05952 138 -PVLAPM-AACATGLWAIAQGVELIQTGQCQRVIAGAVEAPITPLTLAGFQQMGALAKTGAYPFDRQR----EGLVLGEG 211 (381)
T ss_pred -cccccc-chhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHhcCCcCCCCCCCCCCCC----CCcccccc
Confidence 788999 59999999999999999999999999999996 3320 0010 122 25689999
Q ss_pred cEEEEEeccCCcccccceeEe-eEEEEEecCCcccccceeecccCCCceeeeechhHHHHHHHHhhhhhhhcCCCccchh
Q 011007 277 GAAILLSNRRRNRSRAKYRLV-HVVRTHKGADDKAYRCVFEEEDKEGKVGISLSKDLMAIAGEALKSNITTIGPLVLPAS 355 (496)
Q Consensus 277 AaA~lLs~~~~~~~~~~~~L~-~~~~t~~~~d~~~~~~~~~~~d~~G~~g~~ls~d~~~v~g~~l~~~i~~~gp~vlp~~ 355 (496)
|+++||++.+.-.++. -.+. .+......+|+... ..+. .+ ++..
T Consensus 212 aa~lvLe~~~~A~~rg-~~i~a~I~g~~~~~d~~~~---~~~~-----------~~-----~~~~--------------- 256 (381)
T PRK05952 212 GAILVLESAELAQKRG-AKIYGQILGFGLTCDAYHM---SAPE-----------PD-----GKSA--------------- 256 (381)
T ss_pred EEEEEEeeHHHHHhCC-CceEEEEEEEEecCCCCCC---CCCC-----------CC-----HHHH---------------
Confidence 9999999764321111 1111 12222222332210 0000 00 0000
Q ss_pred HHHHHHHHHHHHhhhcc-ccCCcccchhccccEEEeccCCHHHHHHH-----HHHcCCChhhHhhhhhhhcccCCccCCc
Q 011007 356 EQLLFLMTLIGRKIFNP-KWKPYIPDFKQAFEHFCIHAGGRAVIDEL-----QKNLQLSAEHVEASRMTLHRFGNTSSSS 429 (496)
Q Consensus 356 e~~~~~~~~~~~~v~~~-~~~~~~p~~~~did~f~~H~~~~~v~~~i-----~~~Lgl~~e~~~~S~~~l~r~GNtsSaS 429 (496)
....++.++. .+. ++|||++..|..+...-|.+ .+-++- ++. -..+=..+||+.+++
T Consensus 257 -------~~ai~~Al~~agi~------p~dId~i~~hgtgt~~~D~~E~~al~~~fg~---~~~-v~s~K~~~GH~~~Aa 319 (381)
T PRK05952 257 -------IAAIQQCLARSGLT------PEDIDYIHAHGTATRLNDQREANLIQALFPH---RVA-VSSTKGATGHTLGAS 319 (381)
T ss_pred -------HHHHHHHHHHhCCC------HHHeeEEEccCCCCCCCcHHHHHHHHHHcCC---CCe-eecchhhhccChHHH
Confidence 0111333332 233 38999999998886655443 444441 221 012335699999999
Q ss_pred hHHHHHHH---HHhCCCCC---------------------CCEEEEEeechhHhhhheeeE
Q 011007 430 LWYEMSYI---EEKGRMKK---------------------GDRVWQIAFGSGFKCNSAVWK 466 (496)
Q Consensus 430 i~~~La~~---~~~g~i~~---------------------Gd~Vll~~fG~G~~~~sav~r 466 (496)
-.+++... +++|.+.+ =++++..+||.|-.-.++|++
T Consensus 320 G~~~~~~~~~~l~~~~ipp~~~~~~~~~~~~~v~~~~~~~~~~~l~~s~gfGG~na~lvl~ 380 (381)
T PRK05952 320 GALGVAFSLLALRHQQLPPCVGLQEPEFDLNFVRQAQQSPLQNVLCLSFGFGGQNAAIALG 380 (381)
T ss_pred HHHHHHHHHHHHhcCccCCCCCCCCCCCCCCcCCCcccCCCCEEEEeeecCCCeeEEEEEe
Confidence 87777653 44444332 246778888888776666664
No 88
>PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional
Probab=98.81 E-value=1.3e-07 Score=100.58 Aligned_cols=250 Identities=15% Similarity=0.118 Sum_probs=148.1
Q ss_pred HHHHHHHHHHHHHHHcCCC-cCCcCE----EEeeccCCC------------------C--------CC-cHHHHHHHHcC
Q 011007 162 AELVIFSAMDSLLQKTGLK-PKDIDI----LIVNCSLFS------------------P--------TP-SLSAMVINKYK 209 (496)
Q Consensus 162 a~~la~~Aa~~aL~~agi~-p~dID~----LI~~ss~~~------------------~--------~P-s~a~~I~~~Lg 209 (496)
..+++..|++++|+++|++ +++++. +++.++... . .+ ..+..|...+|
T Consensus 77 ~~~l~~~aa~~Al~dAGl~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~~ 156 (421)
T PTZ00050 77 ATHFAMAAAREALADAKLDILSEKDQERIGVNIGSGIGSLADLTDEMKTLYEKGHSRVSPYFIPKILGNMAAGLVAIKHK 156 (421)
T ss_pred HHHHHHHHHHHHHHHcCCCcccccCcccEEEEEccCcccHHHHHHHHHHHHhcCcCcCCHHHHHhhhhhHHHHHHHHHhC
Confidence 5789999999999999998 666543 333332110 0 11 24667888899
Q ss_pred CCCCceeeEecCCCcchHHHHHHHHHHHHhcCCCCEEEEEEECCCCCC---------------Cc-c--------CCCcc
Q 011007 210 LRSNIKSFNLSGMGCSAGLISIDLARDLLQVHPNSNAVVVSTEIITPN---------------YY-Q--------GNERA 265 (496)
Q Consensus 210 l~~~~~~~dl~g~gCsg~l~al~lA~~lL~~~~~~~aLVVs~E~~s~~---------------~~-~--------~~dr~ 265 (496)
++. +++.++ .+|++++.||..|.++|++|..+.+||.++|..... +. . ..++
T Consensus 157 l~G--p~~ti~-~aCaSg~~Al~~A~~~I~~G~~d~~lvgG~e~~~~p~~~~~f~~~~~l~~~~~~~p~~~~~pfd~~~- 232 (421)
T PTZ00050 157 LKG--PSGSAV-TACATGAHCIGEAFRWIKYGEADIMICGGTEASITPVSFAGFSRMRALCTKYNDDPQRASRPFDKDR- 232 (421)
T ss_pred CCC--cccccc-cHhHHHHHHHHHHHHHHHcCCCCEEEECcccccCCHHHHHHHHhhhccccCcCCCCCccCCCCcCCC-
Confidence 974 788899 599999999999999999999999999999973210 00 0 0112
Q ss_pred ccccccccccccEEEEEeccCCcccccceeEee-EEEEEecCCcccccceeecccCCCceeeeechhHHHHHHHHhhhhh
Q 011007 266 MLLPNCLFRMGGAAILLSNRRRNRSRAKYRLVH-VVRTHKGADDKAYRCVFEEEDKEGKVGISLSKDLMAIAGEALKSNI 344 (496)
Q Consensus 266 ~l~~~~lfgDGAaA~lLs~~~~~~~~~~~~L~~-~~~t~~~~d~~~~~~~~~~~d~~G~~g~~ls~d~~~v~g~~l~~~i 344 (496)
...+.||||+|+||++.+.-.++. -.+.. +.......|+.+ ...+.. + +.
T Consensus 233 ---~G~~~gEGAaalvLe~~~~A~~~g-~~i~a~i~g~~~~~d~~~---~~~p~~-----------~-----~~------ 283 (421)
T PTZ00050 233 ---AGFVMGEGAGILVLEELEHALRRG-AKIYAEIRGYGSSSDAHH---ITAPHP-----------D-----GR------ 283 (421)
T ss_pred ---CCEeeccceEEEEEeeHHHHHHCC-CeEEEEEEEEEEcCCCCC---CCCCCC-----------C-----hH------
Confidence 256789999999999765322111 12221 122222222211 000100 0 00
Q ss_pred hhcCCCccchhHHHHHHHHHHHHhhhcc--ccCCcccchhccccEEEeccCCHHHH-----HHHHHHcCCCh-hhHhhhh
Q 011007 345 TTIGPLVLPASEQLLFLMTLIGRKIFNP--KWKPYIPDFKQAFEHFCIHAGGRAVI-----DELQKNLQLSA-EHVEASR 416 (496)
Q Consensus 345 ~~~gp~vlp~~e~~~~~~~~~~~~v~~~--~~~~~~p~~~~did~f~~H~~~~~v~-----~~i~~~Lgl~~-e~~~~S~ 416 (496)
.. ....++.++. .+. .+|||++.+|..+...- +.+.+.+|-.. +.+. --
T Consensus 284 ------------~~----~~ai~~Al~~~Agi~------~~dId~ie~hgtgt~~~D~~E~~al~~~~~~~~~~~~~-v~ 340 (421)
T PTZ00050 284 ------------GA----RRCMENALKDGANIN------INDVDYVNAHATSTPIGDKIELKAIKKVFGDSGAPKLY-VS 340 (421)
T ss_pred ------------HH----HHHHHHHHHhccCCC------hhhCCEEECCCccCCCCCHHHHHHHHHHhccccCCCce-EE
Confidence 00 0112334433 233 38999999998887443 34445555321 2221 01
Q ss_pred hhhcccCCccCCchHHHHHHH---HHhCCCCC--------------------------CCEEEEEeechhHhhhheeeEe
Q 011007 417 MTLHRFGNTSSSSLWYEMSYI---EEKGRMKK--------------------------GDRVWQIAFGSGFKCNSAVWKC 467 (496)
Q Consensus 417 ~~l~r~GNtsSaSi~~~La~~---~~~g~i~~--------------------------Gd~Vll~~fG~G~~~~sav~r~ 467 (496)
.+=..+||+.+++-.++|... +++|.+.+ =.+++..+||-|-+-.++|++.
T Consensus 341 s~K~~~GH~~~AaG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~nsfgfgG~n~~lvl~~ 420 (421)
T PTZ00050 341 STKGGLGHLLGAAGAVESIVTILSLYEQIIPPTINLENPDAECDLNLVQGKTAHPLQSIDAVLSTSFGFGGVNTALLFTK 420 (421)
T ss_pred CccccccccHHHHHHHHHHHHHHHHHcCccCCCCCCCCCCCCCCccccCCcccCcCCCCCEEEEeeecCCCeeEEEEEeC
Confidence 223368999999887777653 34443211 1467788899887777887763
No 89
>PLN02787 3-oxoacyl-[acyl-carrier-protein] synthase II
Probab=98.80 E-value=1.5e-06 Score=95.04 Aligned_cols=119 Identities=13% Similarity=0.115 Sum_probs=84.9
Q ss_pred HHHHHHHHHHHHHHHcCCCcC--------CcCEEEeeccCC---------------------C----CCC-cHHHHHHHH
Q 011007 162 AELVIFSAMDSLLQKTGLKPK--------DIDILIVNCSLF---------------------S----PTP-SLSAMVINK 207 (496)
Q Consensus 162 a~~la~~Aa~~aL~~agi~p~--------dID~LI~~ss~~---------------------~----~~P-s~a~~I~~~ 207 (496)
...++..|++++|+++|++++ .++ +++.++.. + ..+ ..+.+|...
T Consensus 199 ~~~~al~Aa~eAL~dAGl~~~~~~~~~~~r~G-V~vGt~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~ 277 (540)
T PLN02787 199 FMLYLLTAGKKALADGGITEDVMKELDKTKCG-VLIGSAMGGMKVFNDAIEALRISYRKMNPFCVPFATTNMGSAMLAMD 277 (540)
T ss_pred HHHHHHHHHHHHHHHcCCCcccccccCCCceE-EEEEeccchHHHHHHHHHHHhhccccCCcchhhhhcccHHHHHHHHH
Confidence 456889999999999998764 233 44444310 0 011 235688999
Q ss_pred cCCCCCceeeEecCCCcchHHHHHHHHHHHHhcCCCCEEEEEEECCCCCCC---------------------ccCCCccc
Q 011007 208 YKLRSNIKSFNLSGMGCSAGLISIDLARDLLQVHPNSNAVVVSTEIITPNY---------------------YQGNERAM 266 (496)
Q Consensus 208 Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL~~~~~~~aLVVs~E~~s~~~---------------------~~~~dr~~ 266 (496)
+|++ -+++.++ .+|++++.||..|.++|+.|..+.+||.++|.....+ ..+-|+..
T Consensus 278 ~gl~--Gp~~tis-tACASs~~Ai~~A~~~Ir~G~aD~aLvGG~d~~l~p~~~~~f~~~~aLS~~~~~p~~~~rPFD~~r 354 (540)
T PLN02787 278 LGWM--GPNYSIS-TACATSNFCILNAANHIIRGEADVMLCGGSDAAIIPIGLGGFVACRALSQRNDDPTKASRPWDMNR 354 (540)
T ss_pred hCCC--CCccccc-cccccHHHHHHHHHHHHHcCCCCEEEEeccccccCHHHHHHHHHHHHhhccCCCcccccCCcccCC
Confidence 9997 4788999 5999999999999999999999999999999631100 00001110
Q ss_pred cccccccccccEEEEEeccC
Q 011007 267 LLPNCLFRMGGAAILLSNRR 286 (496)
Q Consensus 267 l~~~~lfgDGAaA~lLs~~~ 286 (496)
...++|+||+++||++.+
T Consensus 355 --dGfv~GEGAa~lVLE~~e 372 (540)
T PLN02787 355 --DGFVMGEGAGVLLLEELE 372 (540)
T ss_pred --CCcccccceEEEEEeeHH
Confidence 257899999999999754
No 90
>PRK07661 acetyl-CoA acetyltransferase; Provisional
Probab=98.80 E-value=2.4e-08 Score=105.16 Aligned_cols=94 Identities=16% Similarity=0.204 Sum_probs=83.6
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEeecc-CCCC-CCcHHHHHHHHcCCCCCceeeEecCCCcchHHHHHHHHHHHHh
Q 011007 162 AELVIFSAMDSLLQKTGLKPKDIDILIVNCS-LFSP-TPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLLQ 239 (496)
Q Consensus 162 a~~la~~Aa~~aL~~agi~p~dID~LI~~ss-~~~~-~Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL~ 239 (496)
..+|+.+|++++|+++|+.++|||.+|++++ ++.. .+..+.+++..+|++..+++++++ .+|++|+.|+..|...++
T Consensus 27 ~~eLa~~A~~~AL~~ag~~~~dID~vi~g~~~~~~~~g~~~a~~~~~~lGl~~~~p~~~V~-~aCaSG~~Al~~A~~~I~ 105 (391)
T PRK07661 27 PDDLGALVVKETLKRAGNYEGPIDDLIIGCAMPEAEQGLNMARNIGALAGLPYTVPAITIN-RYCSSGLQSIAYGAERIM 105 (391)
T ss_pred HHHHHHHHHHHHHHhcCCChhHCCEEEEEeccccccccchHHHHHHHHcCCCCCcceeehh-hhhhHHHHHHHHHHHHHH
Confidence 5789999999999999988899999999865 3333 367778899999998559999999 699999999999999999
Q ss_pred cCCCCEEEEEEECCCCC
Q 011007 240 VHPNSNAVVVSTEIITP 256 (496)
Q Consensus 240 ~~~~~~aLVVs~E~~s~ 256 (496)
+|..+.+||++.|.+|.
T Consensus 106 sG~~d~vLv~G~E~ms~ 122 (391)
T PRK07661 106 LGHSEAVIAGGAESMSL 122 (391)
T ss_pred cCCCCEEEEEEEeeccc
Confidence 99999999999999885
No 91
>PRK07967 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=98.79 E-value=7.8e-07 Score=94.26 Aligned_cols=186 Identities=11% Similarity=0.114 Sum_probs=111.7
Q ss_pred CceEEEEeeeecCCCCcccChHHHHHHHhhhhc--CCcchHHHHHHHHHHcCCCceeecCCCCcC-CCCCCchHHHHHhH
Q 011007 86 RHVYLVDYACYKPPVTCRVPFATFMEHSRLILK--NNPKSVEFQMRILERSGLGEETCLPPAIHY-IPPTPTMEAARGEA 162 (496)
Q Consensus 86 ~~v~Iv~~~~y~P~~~~~v~~~~~~e~~~~~~~--~~~~~~~f~~~i~~~sGi~~r~~~~~~~~~-~~~~~~~~~~~~ea 162 (496)
++|.|.++|+.-|-- .+.+++.+.+.. ++ +.+- . -++..+...+.....+... ..............
T Consensus 2 ~rVvITG~G~vsp~G---~~~~~~w~~l~~-G~sgi~~~-----~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~r~ 71 (406)
T PRK07967 2 RRVVITGLGIVSSIG---NNQQEVLASLRE-GRSGITFS-----P-EFAEMGMRSQVWGNVKLDPTGLIDRKVMRFMGDA 71 (406)
T ss_pred CcEEEEcceEECCCC---CCHHHHHHHHHc-CCCceeEC-----C-cccccCCCCceEEEcCCChhhcCCHHHhhcCCHH
Confidence 479999999999973 667877776542 10 0000 0 0111222222221111000 00000000011125
Q ss_pred HHHHHHHHHHHHHHcCCCcC-----CcCEEEeeccCC------------------C--------CCC-cHHHHHHHHcCC
Q 011007 163 ELVIFSAMDSLLQKTGLKPK-----DIDILIVNCSLF------------------S--------PTP-SLSAMVINKYKL 210 (496)
Q Consensus 163 ~~la~~Aa~~aL~~agi~p~-----dID~LI~~ss~~------------------~--------~~P-s~a~~I~~~Lgl 210 (496)
..++..|++++|+++|++++ .+++++-.+... . ..| ..+..|...||+
T Consensus 72 ~~~a~~aa~~Al~dAGl~~~~~~~~rvGv~~gs~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~~~l 151 (406)
T PRK07967 72 SAYAYLAMEQAIADAGLSEEQVSNPRTGLIAGSGGGSTRNQVEAADAMRGPRGPKRVGPYAVTKAMASTVSACLATPFKI 151 (406)
T ss_pred HHHHHHHHHHHHHHcCCCCccCCCCCEEEEEecCCccHHHHHHHHHHHHhccCcccCCchhhcccccchHHHHHHHHHCC
Confidence 57889999999999998754 344444322110 0 111 367789999999
Q ss_pred CCCceeeEecCCCcchHHHHHHHHHHHHhcCCCCEEEEEEECCCCCCCc---------------------cCCCcccccc
Q 011007 211 RSNIKSFNLSGMGCSAGLISIDLARDLLQVHPNSNAVVVSTEIITPNYY---------------------QGNERAMLLP 269 (496)
Q Consensus 211 ~~~~~~~dl~g~gCsg~l~al~lA~~lL~~~~~~~aLVVs~E~~s~~~~---------------------~~~dr~~l~~ 269 (496)
+. +++.++ .+|++++.||..|.++|+.|..+.+||.++|..+..+. .+-|+.. .
T Consensus 152 ~G--p~~tvs-~aCas~~~Ai~~A~~~ir~G~~d~~lvgg~d~~~~~~~~~f~~~~~ls~~~~~~p~~~~rPFd~~r--~ 226 (406)
T PRK07967 152 KG--VNYSIS-SACATSAHCIGNAVEQIQLGKQDIVFAGGGEELDWEMSCLFDAMGALSTKYNDTPEKASRAYDANR--D 226 (406)
T ss_pred CC--Cccccc-cHhHHHHHHHHHHHHHHHcCCCCEEEEeeecccChHHHHHHHHhhhhccCCCCCCCcCCcCCcCCC--C
Confidence 74 688899 59999999999999999999999999999987543100 0001110 2
Q ss_pred ccccccccEEEEEeccC
Q 011007 270 NCLFRMGGAAILLSNRR 286 (496)
Q Consensus 270 ~~lfgDGAaA~lLs~~~ 286 (496)
.++.|+||+++||++.+
T Consensus 227 G~v~gEGaa~lvLe~~~ 243 (406)
T PRK07967 227 GFVIAGGGGVVVVEELE 243 (406)
T ss_pred ceeeeceEEEEEEeeHH
Confidence 56789999999999754
No 92
>cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria. CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine.
Probab=98.77 E-value=1.2e-06 Score=92.72 Aligned_cols=120 Identities=15% Similarity=0.125 Sum_probs=85.3
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcC----EEEeeccC-C-----------------CCCC---------cHHHHHHHHcCC
Q 011007 162 AELVIFSAMDSLLQKTGLKPKDID----ILIVNCSL-F-----------------SPTP---------SLSAMVINKYKL 210 (496)
Q Consensus 162 a~~la~~Aa~~aL~~agi~p~dID----~LI~~ss~-~-----------------~~~P---------s~a~~I~~~Lgl 210 (496)
...++..|++++|+++|+++++++ .+++.++. . ...| ..+..|...+|+
T Consensus 71 ~~~~~l~aa~eAl~dAGl~~~~~~~~r~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl 150 (399)
T cd00832 71 MTRLALAAADWALADAGVDPAALPPYDMGVVTASAAGGFEFGQRELQKLWSKGPRHVSAYQSFAWFYAVNTGQISIRHGM 150 (399)
T ss_pred HHHHHHHHHHHHHHHcCCCccccCCCceEEEEccCCccHHHHHHHHHHHHhcCccccChhhhhhhhhhHHHHHHHHHhCC
Confidence 567899999999999999765432 23444321 1 0011 246788999999
Q ss_pred CCCceeeEecCCCcchHHHHHHHHHHHHhcCCCCEEEEEEECCCCCC----------Ccc----------CCCccccccc
Q 011007 211 RSNIKSFNLSGMGCSAGLISIDLARDLLQVHPNSNAVVVSTEIITPN----------YYQ----------GNERAMLLPN 270 (496)
Q Consensus 211 ~~~~~~~dl~g~gCsg~l~al~lA~~lL~~~~~~~aLVVs~E~~s~~----------~~~----------~~dr~~l~~~ 270 (496)
+. +++.++ .+|++++.||..|.++|+.+. +.+||.++|..... ... +-|+.. ..
T Consensus 151 ~G--p~~ti~-~acaS~~~Al~~A~~~i~~G~-d~~i~gg~d~~~~p~~~~~~~~~~~ls~~~~p~~~~rPFd~~~--~G 224 (399)
T cd00832 151 RG--PSGVVV-AEQAGGLDALAQARRLVRRGT-PLVVSGGVDSALCPWGWVAQLSSGRLSTSDDPARAYLPFDAAA--AG 224 (399)
T ss_pred CC--Cccccc-chhHHHHHHHHHHHHHHHcCC-CeEEEEeeccccCHHHHHHHHhccccCCCCCCCCCcCCCcCCC--CC
Confidence 74 788888 599999999999999999999 99999999873210 000 001110 35
Q ss_pred cccccccEEEEEeccCC
Q 011007 271 CLFRMGGAAILLSNRRR 287 (496)
Q Consensus 271 ~lfgDGAaA~lLs~~~~ 287 (496)
.+.|+||++++|++.+.
T Consensus 225 ~~~gEGa~~lvLe~~~~ 241 (399)
T cd00832 225 YVPGEGGAILVLEDAAA 241 (399)
T ss_pred EeeeceEEEEEEeeHHH
Confidence 78899999999997654
No 93
>PRK07516 acetyl-CoA acetyltransferase; Provisional
Probab=98.75 E-value=3.7e-08 Score=103.73 Aligned_cols=93 Identities=18% Similarity=0.179 Sum_probs=75.9
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEeeccC-CC--CCCcHHHHHHHHcCCCCCceeeEecCCCcchHHHHHHHHHHHH
Q 011007 162 AELVIFSAMDSLLQKTGLKPKDIDILIVNCSL-FS--PTPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLL 238 (496)
Q Consensus 162 a~~la~~Aa~~aL~~agi~p~dID~LI~~ss~-~~--~~Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL 238 (496)
..+|+.+|++++|+++|++++|||.+|+++.. .. ..+..+..+...+|++ .+++++++ ++|++++.||..|..++
T Consensus 22 ~~eL~~eA~~~AL~dAgl~~~dId~vi~g~~~~~~~~~~~~~~~~~~~~~gl~-~~p~~~v~-~~CaSg~~Al~~A~~~I 99 (389)
T PRK07516 22 LESLIVRVAREALAHAGIAAGDVDGIFLGHFNAGFSPQDFPASLVLQADPALR-FKPATRVE-NACATGSAAVYAALDAI 99 (389)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEEecCCccccccchhHHHHHhcCCC-CCceeeec-cccHHHHHHHHHHHHHH
Confidence 57899999999999999999999999987642 21 1111122334456876 78899999 69999999999999999
Q ss_pred hcCCCCEEEEEEECCCCC
Q 011007 239 QVHPNSNAVVVSTEIITP 256 (496)
Q Consensus 239 ~~~~~~~aLVVs~E~~s~ 256 (496)
++|..+++||+++|..|.
T Consensus 100 ~sG~~d~vLvvg~e~~s~ 117 (389)
T PRK07516 100 EAGRARIVLVVGAEKMTA 117 (389)
T ss_pred HCCCCCEEEEEEehhhcc
Confidence 999999999999999763
No 94
>PLN02287 3-ketoacyl-CoA thiolase
Probab=98.74 E-value=4.7e-08 Score=104.68 Aligned_cols=94 Identities=14% Similarity=0.213 Sum_probs=81.5
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEeecc-CCCCCCc-HHHHHHHHcCCCCCceeeEecCCCcchHHHHHHHHHHHHh
Q 011007 162 AELVIFSAMDSLLQKTGLKPKDIDILIVNCS-LFSPTPS-LSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLLQ 239 (496)
Q Consensus 162 a~~la~~Aa~~aL~~agi~p~dID~LI~~ss-~~~~~Ps-~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL~ 239 (496)
..+|+.+|++++|+++|++++|||.+|+++. .....+. .+.++...+|++..+++++++ .+|++|+.++..|...++
T Consensus 71 ~~eLa~eA~~~AL~dAgl~~~dID~vv~G~~~~~~~~~~~~~r~~a~~~Gl~~~~pa~~V~-~~CaSG~~Ai~~Aa~~I~ 149 (452)
T PLN02287 71 PDDLLAPVLKAVVEKTGLNPSEVGDIVVGTVLAPGSQRANECRMAAFYAGFPETVPVRTVN-RQCSSGLQAVADVAAAIK 149 (452)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeecCcccccchHHHHHHHHCCCCCCcceEEEe-ccCchHHHHHHHHHHHHH
Confidence 6899999999999999999999999998765 3444344 445666778998568999999 699999999999999999
Q ss_pred cCCCCEEEEEEECCCCC
Q 011007 240 VHPNSNAVVVSTEIITP 256 (496)
Q Consensus 240 ~~~~~~aLVVs~E~~s~ 256 (496)
+|..+.|||++.|.+|.
T Consensus 150 sG~~dvvLv~GvE~mS~ 166 (452)
T PLN02287 150 AGFYDIGIGAGVESMTT 166 (452)
T ss_pred cCCCCeEEEEeEEecCC
Confidence 99999999999999875
No 95
>PLN02836 3-oxoacyl-[acyl-carrier-protein] synthase
Probab=98.74 E-value=1.9e-06 Score=92.23 Aligned_cols=120 Identities=14% Similarity=0.092 Sum_probs=86.4
Q ss_pred HHHHHHHHHHHHHHHcCCCcC-----CcCEEEeeccCC------------------CC--------CC-cHHHHHHHHcC
Q 011007 162 AELVIFSAMDSLLQKTGLKPK-----DIDILIVNCSLF------------------SP--------TP-SLSAMVINKYK 209 (496)
Q Consensus 162 a~~la~~Aa~~aL~~agi~p~-----dID~LI~~ss~~------------------~~--------~P-s~a~~I~~~Lg 209 (496)
...++..|+.++|+++|+++. +...++++++.. .. .+ ..+..|...+|
T Consensus 93 ~~~~~~~aa~~Al~dAg~~~~~~~~~~~~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~~g 172 (437)
T PLN02836 93 FIGYALCAADEALSDARWLPSEDEAKERTGVSIGGGIGSITDILEAAQLICEKRLRRLSPFFVPRILINMAAGHVSIRYG 172 (437)
T ss_pred HHHHHHHHHHHHHHHcCCCcccccCCcCEEEEEeeccCcHHHHHHHHHHHHhcCCCCCChhhhhhhcccHHHHHHHHHhC
Confidence 567899999999999998542 345566664311 01 11 24668999999
Q ss_pred CCCCceeeEecCCCcchHHHHHHHHHHHHhcCCCCEEEEEEECCCCCC---------------C-------ccCCCcccc
Q 011007 210 LRSNIKSFNLSGMGCSAGLISIDLARDLLQVHPNSNAVVVSTEIITPN---------------Y-------YQGNERAML 267 (496)
Q Consensus 210 l~~~~~~~dl~g~gCsg~l~al~lA~~lL~~~~~~~aLVVs~E~~s~~---------------~-------~~~~dr~~l 267 (496)
++ -.++.++ .+|++++.||..|.++|++|..+.+||.++|..... + ..+-|+..
T Consensus 173 l~--Gp~~tv~-~acaSg~~Al~~A~~~I~~G~~d~~lvgg~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~pfd~~~- 248 (437)
T PLN02836 173 FQ--GPNHAAV-TACATGAHSIGDAFRMIQFGDADVMVAGGTESSIDALSIAGFSRSRALSTKFNSCPTEASRPFDCDR- 248 (437)
T ss_pred CC--Cceecee-ChhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHHhhhhhcccCCCcccccCCcccCC-
Confidence 87 4788999 599999999999999999999999999998863210 0 00001110
Q ss_pred ccccccccccEEEEEeccC
Q 011007 268 LPNCLFRMGGAAILLSNRR 286 (496)
Q Consensus 268 ~~~~lfgDGAaA~lLs~~~ 286 (496)
..++.||||+|+||++.+
T Consensus 249 -~G~~~gEGaaalVLe~~~ 266 (437)
T PLN02836 249 -DGFVIGEGAGVLVLEELE 266 (437)
T ss_pred -CCeeeecCEEEEEEeeHH
Confidence 257889999999999764
No 96
>PRK13359 beta-ketoadipyl CoA thiolase; Provisional
Probab=98.73 E-value=5.6e-08 Score=102.64 Aligned_cols=94 Identities=13% Similarity=0.196 Sum_probs=85.3
Q ss_pred HHHHHHHHHHHHHHHc-CCCcCCcCEEEeeccC-C-CCCCcHHHHHHHHcCCCCCceeeEecCCCcchHHHHHHHHHHHH
Q 011007 162 AELVIFSAMDSLLQKT-GLKPKDIDILIVNCSL-F-SPTPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLL 238 (496)
Q Consensus 162 a~~la~~Aa~~aL~~a-gi~p~dID~LI~~ss~-~-~~~Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL 238 (496)
+++|+..|++++|++. |++|++||.+|+.|.. . ...+..+..+....|++.+++++.++ +.|++++.|+.+|.+.+
T Consensus 26 ~~~L~~~a~~~al~r~a~i~~~~Id~vi~G~~~~~~~~g~~~ar~~~l~~Gl~~~vp~~tV~-~~CaSG~~Av~~A~~~I 104 (400)
T PRK13359 26 ADDLGAVPLKALVERNPDVDWAAIDDVIYGCANQAGEDNRNVARMSLLLAGLPHGVPGSTIN-RLCGSGMDAVGVAARAI 104 (400)
T ss_pred HHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCCCceEEEe-ccchhHHHHHHHHHHHH
Confidence 6899999999999984 9999999999998753 2 22377888999999999779999999 69999999999999999
Q ss_pred hcCCCCEEEEEEECCCCC
Q 011007 239 QVHPNSNAVVVSTEIITP 256 (496)
Q Consensus 239 ~~~~~~~aLVVs~E~~s~ 256 (496)
++|..+.+|+++.|.+|+
T Consensus 105 ~sG~~divlagGvEsmS~ 122 (400)
T PRK13359 105 KSGEAALMIAGGVESMSR 122 (400)
T ss_pred HcCCCCEEEEeeeeccCC
Confidence 999999999999999986
No 97
>PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed
Probab=98.73 E-value=4.4e-08 Score=104.44 Aligned_cols=94 Identities=11% Similarity=0.207 Sum_probs=84.0
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEeeccCCCC-CCcHHHHHHHHcCCCCCceeeEecCCCcchHHHHHHHHHHHHhc
Q 011007 162 AELVIFSAMDSLLQKTGLKPKDIDILIVNCSLFSP-TPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLLQV 240 (496)
Q Consensus 162 a~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~-~Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL~~ 240 (496)
+.+|+..|++++|+++|++|++||.+|+++..... .+.++.+++..+|++..++++.++ ++|++++.|+..|...+++
T Consensus 29 ~~eL~~~a~~~al~~agl~~~~ID~vi~G~~~~~~~~~~~ar~~a~~aGl~~~~P~~tV~-~aCaSG~~Ai~~Aa~~I~s 107 (428)
T PRK08963 29 AVDLGKMVVGELLARSEIDPELIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHTDAYSVS-RACATSFQAVANVAESIMA 107 (428)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCCCCccHHHHHHHHHCCCCCCCcceeeh-hhhHHHHHHHHHHHHHHHC
Confidence 68999999999999999999999999998754322 355677799999998669999999 6999999999999999999
Q ss_pred CCCCEEEEEEECCCCC
Q 011007 241 HPNSNAVVVSTEIITP 256 (496)
Q Consensus 241 ~~~~~aLVVs~E~~s~ 256 (496)
|..+.+||++.|.+|.
T Consensus 108 G~~dvvLvgG~Esms~ 123 (428)
T PRK08963 108 GTIDIGIAGGADSSSV 123 (428)
T ss_pred CCCCEEEEecccccCC
Confidence 9999999999999885
No 98
>PRK08257 acetyl-CoA acetyltransferase; Validated
Probab=98.73 E-value=1.7e-06 Score=93.85 Aligned_cols=92 Identities=12% Similarity=0.067 Sum_probs=75.0
Q ss_pred HHHHHHHHHHHHHHHcCCC--cCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCCceeeEecCCCcchHHHHHHHHHHHHh
Q 011007 162 AELVIFSAMDSLLQKTGLK--PKDIDILIVNCSLFSPTPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLLQ 239 (496)
Q Consensus 162 a~~la~~Aa~~aL~~agi~--p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL~ 239 (496)
..+|+.+|++++|+++|++ ++|||.+++.+............+++++|+.+ ....... .||+++..++..|...++
T Consensus 27 ~~~L~~eA~~~Al~DAGl~~~~~dID~v~v~~~~~~~~~~~~~~la~~lGl~p-~~~~~~~-~GG~s~~~~v~~Aa~~Ia 104 (498)
T PRK08257 27 PVDLMAAAARAAAADAGADAVLEAIDSVAVVNQLSWRYRDPPGLLAERLGADP-ARTVYSP-VGGNSPQRLVNEAALRIA 104 (498)
T ss_pred HHHHHHHHHHHHHHhcCCCcCHHHCCEEEEeccccccccCHHHHHHHHcCCCC-cceeEec-CCCHHHHHHHHHHHHHHH
Confidence 5789999999999999999 99999998754321122234578999999974 4555555 689899999999999999
Q ss_pred cCCCCEEEEEEECCCC
Q 011007 240 VHPNSNAVVVSTEIIT 255 (496)
Q Consensus 240 ~~~~~~aLVVs~E~~s 255 (496)
+|..+.|||+++|..+
T Consensus 105 sG~advVLv~G~E~~~ 120 (498)
T PRK08257 105 AGEADVALVAGAEAQS 120 (498)
T ss_pred CCCCCEEEEeeeeecc
Confidence 9999999999999753
No 99
>PRK07851 acetyl-CoA acetyltransferase; Provisional
Probab=98.71 E-value=6.5e-08 Score=102.42 Aligned_cols=93 Identities=16% Similarity=0.223 Sum_probs=81.6
Q ss_pred HHHHHHHHHHHHHHHc-CCCcCCcCEEEeecc-CC-CCCCcHHHHHHHHcCCCCCceeeEecCCCcchHHHHHHHHHHHH
Q 011007 162 AELVIFSAMDSLLQKT-GLKPKDIDILIVNCS-LF-SPTPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLL 238 (496)
Q Consensus 162 a~~la~~Aa~~aL~~a-gi~p~dID~LI~~ss-~~-~~~Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL 238 (496)
..+|+.+|++++|+++ |++|+|||.+|+++. ++ ...+..+..++..+|++ +++++.++ .+|+++..++..|.+.+
T Consensus 27 ~~eL~~~A~~~AL~da~gl~~~dID~vv~g~~~~~~~~g~~~~~~~a~~lGl~-~~p~~~v~-~~caSG~~av~~Aa~~I 104 (406)
T PRK07851 27 PDDLAAQMVRAALDKVPALDPTDIDDLMLGCGLPGGEQGFNMARVVAVLLGYD-FLPGTTVN-RYCSSSLQTTRMAFHAI 104 (406)
T ss_pred HHHHHHHHHHHHHHhccCCCHHHCCEEEEEcccccccccCCHHHHHHHHcCCC-CCCeeeee-ccchhHHHHHHHHHHHH
Confidence 6789999999999996 999999999998753 22 22356678899999996 68999999 59999999999999999
Q ss_pred hcCCCCEEEEEEECCCCC
Q 011007 239 QVHPNSNAVVVSTEIITP 256 (496)
Q Consensus 239 ~~~~~~~aLVVs~E~~s~ 256 (496)
++|..+.+||++.|.+|.
T Consensus 105 ~sG~~d~vLv~G~e~~s~ 122 (406)
T PRK07851 105 KAGEGDVFISAGVETVSR 122 (406)
T ss_pred HCCCCCEEEEeeEEeccc
Confidence 999999999999998775
No 100
>PRK07910 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=98.70 E-value=2.1e-06 Score=91.42 Aligned_cols=314 Identities=13% Similarity=0.076 Sum_probs=173.3
Q ss_pred CceEEEEeeeecCCCCcccChHHHHHHHhhhhc--CCcchHHHHHHHHHHcCCCcee--ecCCCCcCCCCCCchHHHHH-
Q 011007 86 RHVYLVDYACYKPPVTCRVPFATFMEHSRLILK--NNPKSVEFQMRILERSGLGEET--CLPPAIHYIPPTPTMEAARG- 160 (496)
Q Consensus 86 ~~v~Iv~~~~y~P~~~~~v~~~~~~e~~~~~~~--~~~~~~~f~~~i~~~sGi~~r~--~~~~~~~~~~~~~~~~~~~~- 160 (496)
++|.|+|+|+..|-- .+.+++.+.+.. ++ +.+-.. .-.++.++..+. .++.+.. +..+-++.+.
T Consensus 12 ~~VvItGig~~sp~g---~~~~~~w~~L~~-G~s~i~~~~~----~~~~~~~~~~~~~g~i~~~~d---~~~~~~~~~~~ 80 (418)
T PRK07910 12 PNVVVTGIAMTTALA---TDAETTWKLLLD-GQSGIRTLDD----PFVEEFDLPVRIGGHLLEEFD---HQLTRVELRRM 80 (418)
T ss_pred CCEEEEeeEEECCCC---CCHHHHHHHHHc-CCCeeEeCCh----hhhhccCCCcceEEEeccCcc---ccCCHHHHhhc
Confidence 579999999999973 577888877642 11 111000 001122222221 1111110 0111122221
Q ss_pred -hHHHHHHHHHHHHHHHcCC---CcCCcCEEEeeccCC-------C------------------CCC-cHHHHHHHHcCC
Q 011007 161 -EAELVIFSAMDSLLQKTGL---KPKDIDILIVNCSLF-------S------------------PTP-SLSAMVINKYKL 210 (496)
Q Consensus 161 -ea~~la~~Aa~~aL~~agi---~p~dID~LI~~ss~~-------~------------------~~P-s~a~~I~~~Lgl 210 (496)
....++..|++++|+++|+ +++++++++-.+... + ..| ..+..|...+|+
T Consensus 81 d~~~~~~l~aa~~AledAg~~~~~~~r~Gv~~G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~~~ 160 (418)
T PRK07910 81 SYLQRMSTVLGRRVWENAGSPEVDTNRLMVSIGTGLGSAEELVFAYDDMRARGLRAVSPLAVQMYMPNGPAAAVGLERHA 160 (418)
T ss_pred cHHHHHHHHHHHHHHHHcCCCCCCcccEEEEEEEccCccHhHHHHHHHHHhcCcccCChhHHHHhccccHHHHHHHHhCC
Confidence 2456889999999999995 556666554332110 0 011 245667888888
Q ss_pred CCCceeeEecCCCcchHHHHHHHHHHHHhcCCCCEEEEEEECCCCCCC-----------cc-----CC------Cccccc
Q 011007 211 RSNIKSFNLSGMGCSAGLISIDLARDLLQVHPNSNAVVVSTEIITPNY-----------YQ-----GN------ERAMLL 268 (496)
Q Consensus 211 ~~~~~~~dl~g~gCsg~l~al~lA~~lL~~~~~~~aLVVs~E~~s~~~-----------~~-----~~------dr~~l~ 268 (496)
+. .++.++ .+|++++.||..|.++|+.|..+.++|.++|.....+ .. ++ |+. -
T Consensus 161 ~G--~~~ti~-taCaS~~~Al~~A~~~I~~G~~d~aivgg~~~~~~~~~~~~f~~~~~~ls~~~~~~~~~~rPFd~~--~ 235 (418)
T PRK07910 161 KA--GVITPV-SACASGSEAIAQAWRQIVLGEADIAICGGVETRIEAVPIAGFAQMRIVMSTNNDDPAGACRPFDKD--R 235 (418)
T ss_pred CC--Cccccc-chhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHhcCCccccCCCCCCCCcCCCcCC--C
Confidence 74 577788 5999999999999999999999999999999742100 00 00 111 0
Q ss_pred cccccccccEEEEEeccCCcccccceeEe-eEEEEEecCCcccccceeecccCCCceeeeechhHHHHHHHHhhhhhhhc
Q 011007 269 PNCLFRMGGAAILLSNRRRNRSRAKYRLV-HVVRTHKGADDKAYRCVFEEEDKEGKVGISLSKDLMAIAGEALKSNITTI 347 (496)
Q Consensus 269 ~~~lfgDGAaA~lLs~~~~~~~~~~~~L~-~~~~t~~~~d~~~~~~~~~~~d~~G~~g~~ls~d~~~v~g~~l~~~i~~~ 347 (496)
..+++|+|++++||++.+.-.++ +.++. .+......+|+.+. ..+ +. + +..
T Consensus 236 ~G~v~gEGaa~vvLe~~~~A~~r-g~~i~a~i~g~~~~~dg~~~---~~~-~~----------~-----~~~-------- 287 (418)
T PRK07910 236 DGFVFGEGGALMVIETEEHAKAR-GANILARIMGASITSDGFHM---VAP-DP----------N-----GER-------- 287 (418)
T ss_pred CCEeeeceEEEEEEeeHHHHHhC-CCcEEEEEEEEEEecCCCCC---CCC-CC----------C-----HHH--------
Confidence 36789999999999976532221 11222 12222333343211 111 00 0 000
Q ss_pred CCCccchhHHHHHHHHHHHHhhhcc-ccCCcccchhccccEEEeccCCHHH-----HHHHHHHcCCChhhHhhhhhhhcc
Q 011007 348 GPLVLPASEQLLFLMTLIGRKIFNP-KWKPYIPDFKQAFEHFCIHAGGRAV-----IDELQKNLQLSAEHVEASRMTLHR 421 (496)
Q Consensus 348 gp~vlp~~e~~~~~~~~~~~~v~~~-~~~~~~p~~~~did~f~~H~~~~~v-----~~~i~~~Lgl~~e~~~~S~~~l~r 421 (496)
+ ....++.++. .+. ++|||++..|..+... .+.+.+.+|-..-.+ ..+=..
T Consensus 288 ---------~-----~~a~~~Al~~agi~------~~did~ie~hgtgt~~~D~~E~~Al~~~fg~~~~~v---~s~K~~ 344 (418)
T PRK07910 288 ---------A-----GHAMTRAIELAGLT------PGDIDHVNAHATGTSVGDVAEGKAINNALGGHRPAV---YAPKSA 344 (418)
T ss_pred ---------H-----HHHHHHHHHHhCCC------HHHCCEEEcCCcCCCCCCHHHHHHHHHHhCCCCCce---eCcccc
Confidence 0 0011333332 233 4899999999988644 444566676321112 234456
Q ss_pred cCCccCCchHHHHHHH---HHhCCCC----------------------CC--CEEEEEeechhHhhhheeeE
Q 011007 422 FGNTSSSSLWYEMSYI---EEKGRMK----------------------KG--DRVWQIAFGSGFKCNSAVWK 466 (496)
Q Consensus 422 ~GNtsSaSi~~~La~~---~~~g~i~----------------------~G--d~Vll~~fG~G~~~~sav~r 466 (496)
+||+.+++-.++|... +++|.+. ++ .+++.-+||.|-+-.++|++
T Consensus 345 ~GH~~~AaG~~~li~~~l~l~~~~ipp~~n~~~~~p~~~l~~~~~~~~~~~~~~al~nsfGfGG~N~slvl~ 416 (418)
T PRK07910 345 LGHSVGAVGAVESILTVLALRDGVIPPTLNLENLDPEIDLDVVAGEPRPGNYRYAINNSFGFGGHNVALAFG 416 (418)
T ss_pred ccccHHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCcccCCCCCcCCCccEEEEeeecCCCeeEEEEEe
Confidence 8999999877775542 3333321 11 35566778877666666665
No 101
>PRK06289 acetyl-CoA acetyltransferase; Provisional
Probab=98.69 E-value=5.8e-08 Score=102.76 Aligned_cols=91 Identities=19% Similarity=0.180 Sum_probs=73.5
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEeecc-CCCCC-----CcHHHHHHHHcCCCCCceeeEecCCCcchHHHHHHHHH
Q 011007 162 AELVIFSAMDSLLQKTGLKPKDIDILIVNCS-LFSPT-----PSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLAR 235 (496)
Q Consensus 162 a~~la~~Aa~~aL~~agi~p~dID~LI~~ss-~~~~~-----Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~ 235 (496)
..+|+.+|++++|+++|++|+|||.+|++++ +++.. |+.+..++ .++. ++++++++ .+|++++.||..|.
T Consensus 26 ~~eLa~eA~~~AL~dAgl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~~~--~~~~-g~~~~~v~-~~Casg~~al~~Aa 101 (403)
T PRK06289 26 FADLTREVVDGTLAAAGVDADDIEVVHVGNFFGELFAGQGHLGAMPATVH--PALW-GVPASRHE-AACASGSVATLAAM 101 (403)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccccchHHHHHh--hcCC-CCceeecc-cccHHHHHHHHHHH
Confidence 5789999999999999999999999998754 33222 33333232 2443 46799999 59999999999999
Q ss_pred HHHhcCCCCEEEEEEECCCCC
Q 011007 236 DLLQVHPNSNAVVVSTEIITP 256 (496)
Q Consensus 236 ~lL~~~~~~~aLVVs~E~~s~ 256 (496)
.++++|..++|||+++|..|.
T Consensus 102 ~~I~sG~~~~VLvvg~e~~s~ 122 (403)
T PRK06289 102 ADLRAGRYDVALVVGVELMKT 122 (403)
T ss_pred HHHHcCCCCEEEEEEEEecCC
Confidence 999999999999999998663
No 102
>PRK07850 acetyl-CoA acetyltransferase; Provisional
Probab=98.68 E-value=1e-07 Score=100.25 Aligned_cols=94 Identities=13% Similarity=0.246 Sum_probs=82.8
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEeeccC-CCCC-CcHHHHHHHHcCCCCCceeeEecCCCcchHHHHHHHHHHHHh
Q 011007 162 AELVIFSAMDSLLQKTGLKPKDIDILIVNCSL-FSPT-PSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLLQ 239 (496)
Q Consensus 162 a~~la~~Aa~~aL~~agi~p~dID~LI~~ss~-~~~~-Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL~ 239 (496)
+.+|+.+|++++|+++|++|+|||.+++.|.. .... ...+..+...+|++.+++++.++ ++|++++.|+..|.+.++
T Consensus 26 ~~eL~~~a~~~aL~~agi~~~~Id~v~~G~~~~~~~q~~~~ar~~~l~~Gl~~~~p~~tV~-~~CaSG~~A~~~A~~~I~ 104 (387)
T PRK07850 26 AAELLGAVQRAVLDRAGIDPGDVEQVIGGCVTQAGEQSNNITRTAWLHAGLPYHVGATTID-CQCGSAQQANHLVAGLIA 104 (387)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccchHHHHHHHhCCCCCCCceEEEe-cccccHHHHHHHHHHHHH
Confidence 68999999999999999999999999998753 2222 34556777789998679999999 699999999999999999
Q ss_pred cCCCCEEEEEEECCCCC
Q 011007 240 VHPNSNAVVVSTEIITP 256 (496)
Q Consensus 240 ~~~~~~aLVVs~E~~s~ 256 (496)
+|..+.+|+++.|.+|.
T Consensus 105 sG~~dvvla~G~E~mS~ 121 (387)
T PRK07850 105 AGAIDVGIACGVEAMSR 121 (387)
T ss_pred CCCCCEEEEEeEecCCC
Confidence 99999999999999986
No 103
>PRK09050 beta-ketoadipyl CoA thiolase; Validated
Probab=98.67 E-value=9.9e-08 Score=100.82 Aligned_cols=94 Identities=13% Similarity=0.194 Sum_probs=83.9
Q ss_pred HHHHHHHHHHHHHHH-cCCCcCCcCEEEeeccCC--CCCCcHHHHHHHHcCCCCCceeeEecCCCcchHHHHHHHHHHHH
Q 011007 162 AELVIFSAMDSLLQK-TGLKPKDIDILIVNCSLF--SPTPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLL 238 (496)
Q Consensus 162 a~~la~~Aa~~aL~~-agi~p~dID~LI~~ss~~--~~~Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL 238 (496)
+++|+..|++++|++ +|++|++||.+|+.+... ...+..+..+....|++.+++++.++ ++|++|+.|+..|.+.+
T Consensus 26 ~~~L~~~a~~~al~~~agi~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Gl~~~vP~~tV~-~aCaSG~~Ai~~A~~~I 104 (401)
T PRK09050 26 ADDLGAVPLKALMARNPGVDWEAVDDVIYGCANQAGEDNRNVARMSALLAGLPVSVPGTTIN-RLCGSGMDAVGTAARAI 104 (401)
T ss_pred HHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccchHHHHHHHHcCCCCCCceEEEe-cccccHHHHHHHHHHHH
Confidence 689999999999996 699999999999986532 22356777899999998779999999 69999999999999999
Q ss_pred hcCCCCEEEEEEECCCCC
Q 011007 239 QVHPNSNAVVVSTEIITP 256 (496)
Q Consensus 239 ~~~~~~~aLVVs~E~~s~ 256 (496)
++|..+.+||++.|.+|.
T Consensus 105 ~sG~~dvvlagGvEsmS~ 122 (401)
T PRK09050 105 KAGEAELMIAGGVESMSR 122 (401)
T ss_pred HCCCCCEEEEeccccccc
Confidence 999999999999999986
No 104
>PRK06633 acetyl-CoA acetyltransferase; Provisional
Probab=98.66 E-value=7.1e-08 Score=101.55 Aligned_cols=94 Identities=14% Similarity=0.246 Sum_probs=84.1
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEeeccC-CCCCCcHHHHHHHHcCCCCCceeeEecCCCcchHHHHHHHHHHHHhc
Q 011007 162 AELVIFSAMDSLLQKTGLKPKDIDILIVNCSL-FSPTPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLLQV 240 (496)
Q Consensus 162 a~~la~~Aa~~aL~~agi~p~dID~LI~~ss~-~~~~Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL~~ 240 (496)
+++|+..|++++|+++|++|+|||.+|+.+.. ....+..+.+++..+|++.+++++.++ .+|++|+.|+..|...+++
T Consensus 27 ~~~L~~~a~~~al~~agi~~~~Id~vv~G~~~~~~~g~~~~r~~~~~~Gl~~~~p~~~V~-~~CaSG~~Ai~~A~~~I~s 105 (392)
T PRK06633 27 APMLAAHLIKDILQNSKIDPALVNEVILGQVITGGSGQNPARQTLIHAGIPKEVPGYTIN-KVCGSGLKSVALAANSIMT 105 (392)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCccccccHHHHHHHHHCCCCCCccchhhc-chhHHHHHHHHHHHHHHHc
Confidence 78999999999999999999999999998653 222456677788999998679999999 6999999999999999999
Q ss_pred CCCCEEEEEEECCCCC
Q 011007 241 HPNSNAVVVSTEIITP 256 (496)
Q Consensus 241 ~~~~~aLVVs~E~~s~ 256 (496)
|..+.+|+++.|.+|.
T Consensus 106 G~~dvvla~G~E~ms~ 121 (392)
T PRK06633 106 GDNEIVIAGGQENMSL 121 (392)
T ss_pred CCCCEEEEcccccCCC
Confidence 9999999999999885
No 105
>PRK08131 acetyl-CoA acetyltransferase; Provisional
Probab=98.65 E-value=1.3e-07 Score=99.85 Aligned_cols=94 Identities=15% Similarity=0.227 Sum_probs=83.9
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEeecc-CC-CCCCcHHHHHHHHcCCCCCceeeEecCCCcchHHHHHHHHHHHHh
Q 011007 162 AELVIFSAMDSLLQKTGLKPKDIDILIVNCS-LF-SPTPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLLQ 239 (496)
Q Consensus 162 a~~la~~Aa~~aL~~agi~p~dID~LI~~ss-~~-~~~Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL~ 239 (496)
+++|+.+|++++|+++|++|+|||.+|+.+. +. ...+..+..++...|++..++++.++ .+|++|+.|+..|...++
T Consensus 26 ~~eL~~~a~~~al~~agi~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Glp~~~p~~tV~-~~CaSG~~Ai~~A~~~I~ 104 (401)
T PRK08131 26 PDDLAATVIRRLLEKSGFPGDDIEDVILGCTNQAGEDSRNVARNALLLAGLPVTVPGQTVN-RLCASGLAAVIDAARAIT 104 (401)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccHHHHHHHhcCCCCCCceeeee-chhhhHHHHHHHHHHHHH
Confidence 6899999999999999999999999999865 22 22355677788999998779999999 699999999999999999
Q ss_pred cCCCCEEEEEEECCCCC
Q 011007 240 VHPNSNAVVVSTEIITP 256 (496)
Q Consensus 240 ~~~~~~aLVVs~E~~s~ 256 (496)
+|..+.+||++.|.+|.
T Consensus 105 sG~~dvvlagG~Esms~ 121 (401)
T PRK08131 105 CGEGDLYLAGGVESMSR 121 (401)
T ss_pred CCCCCEEEEEEecCCCC
Confidence 99999999999999985
No 106
>TIGR02430 pcaF beta-ketoadipyl CoA thiolase. Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid.
Probab=98.63 E-value=1.6e-07 Score=99.25 Aligned_cols=94 Identities=17% Similarity=0.201 Sum_probs=84.0
Q ss_pred HHHHHHHHHHHHHHH-cCCCcCCcCEEEeeccC--CCCCCcHHHHHHHHcCCCCCceeeEecCCCcchHHHHHHHHHHHH
Q 011007 162 AELVIFSAMDSLLQK-TGLKPKDIDILIVNCSL--FSPTPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLL 238 (496)
Q Consensus 162 a~~la~~Aa~~aL~~-agi~p~dID~LI~~ss~--~~~~Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL 238 (496)
+.+|+..|++++|++ +|++|+|||.+|+.+.. ....+..+..+...+|++.+++++.++ ++|++|+.|+..|.+.+
T Consensus 25 ~~~L~~~a~~~al~~~a~i~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Gl~~~~p~~~V~-~~CaSG~~Ai~~a~~~I 103 (400)
T TIGR02430 25 ADDLAAVPIKALLARNPQLDWAAIDDVIYGCANQAGEDNRNVARMAALLAGLPVSVPGTTVN-RLCGSGLDAIGMAARAI 103 (400)
T ss_pred HHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCCCceEEee-chhhhHHHHHHHHHHHH
Confidence 689999999999996 69999999999998653 222366778899999998779999999 69999999999999999
Q ss_pred hcCCCCEEEEEEECCCCC
Q 011007 239 QVHPNSNAVVVSTEIITP 256 (496)
Q Consensus 239 ~~~~~~~aLVVs~E~~s~ 256 (496)
++|..+.+|+++.|.+|.
T Consensus 104 ~sG~~d~~la~G~E~ms~ 121 (400)
T TIGR02430 104 KAGEADLLIAGGVESMSR 121 (400)
T ss_pred HCCCCCEEEEeccccccC
Confidence 999999999999999985
No 107
>PRK06366 acetyl-CoA acetyltransferase; Provisional
Probab=98.62 E-value=1.7e-07 Score=98.81 Aligned_cols=94 Identities=11% Similarity=0.197 Sum_probs=81.3
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEeeccC-CCCCCcHHHHHHHHcCCCCCceeeEecCCCcchHHHHHHHHHHHHhc
Q 011007 162 AELVIFSAMDSLLQKTGLKPKDIDILIVNCSL-FSPTPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLLQV 240 (496)
Q Consensus 162 a~~la~~Aa~~aL~~agi~p~dID~LI~~ss~-~~~~Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL~~ 240 (496)
+.+|+.+|++++|+++|++|+|||.+|+.+.. ....+..+..++..+|++.+++++.++ .+|++++.++..|...+++
T Consensus 26 ~~~L~~~a~~~al~dagi~~~dID~vi~g~~~~~~~~~~~a~~~~~~~Gl~~~~p~~~v~-~~caSg~~av~~Aa~~I~s 104 (388)
T PRK06366 26 APQLGGAAIKAVIDDAKLDPALVQEVIMGNVIQAGVGQNPAGQAAYHAGLPFGVTKYTVN-VVCASGMLAVESAAREIML 104 (388)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCccCcHHHHHHHHCCCCCCCcceeee-chhhHHHHHHHHHHHHHhc
Confidence 68899999999999999999999999987642 122334567789999998568999999 6999999999999999999
Q ss_pred CCCCEEEEEEECCCCC
Q 011007 241 HPNSNAVVVSTEIITP 256 (496)
Q Consensus 241 ~~~~~aLVVs~E~~s~ 256 (496)
|..+.+||++.|.+|.
T Consensus 105 G~~d~vla~G~e~ms~ 120 (388)
T PRK06366 105 GERDLVIAGGMENMSN 120 (388)
T ss_pred CCCCEEEEEeeEcccc
Confidence 9999999988898774
No 108
>TIGR02446 FadI fatty oxidation complex, beta subunit FadI. This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (TIGR02440). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in E. coli.
Probab=98.59 E-value=1.6e-07 Score=100.05 Aligned_cols=94 Identities=11% Similarity=0.172 Sum_probs=82.6
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEeeccCC-CCCCcHHHHHHHHcCCCCCceeeEecCCCcchHHHHHHHHHHHHhc
Q 011007 162 AELVIFSAMDSLLQKTGLKPKDIDILIVNCSLF-SPTPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLLQV 240 (496)
Q Consensus 162 a~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~-~~~Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL~~ 240 (496)
+.+|+.+|++++|+++|++|++||.+|+.+... ...+.++..+.-..|++..++++.++ ++|++++.|+.+|...+++
T Consensus 31 ~~~L~~~a~~~al~~agl~~~~Id~vi~G~~~~~~~~~~~ar~~~l~aGl~~~~p~~~V~-~~CaSG~~A~~~a~~~I~s 109 (430)
T TIGR02446 31 AVDLGKMVVSELLARSEIDPKLIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHTDAYSVT-RACATSFQSAVNVAESIMA 109 (430)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCcCccchHHHHHHHhCCCCCCCchhhhh-hhhhHHHHHHHHHHHHHHC
Confidence 689999999999999999999999999987532 22345666666668998779999999 6999999999999999999
Q ss_pred CCCCEEEEEEECCCCC
Q 011007 241 HPNSNAVVVSTEIITP 256 (496)
Q Consensus 241 ~~~~~aLVVs~E~~s~ 256 (496)
|..+.+|+++.|.+|.
T Consensus 110 G~~dvvla~G~E~mS~ 125 (430)
T TIGR02446 110 GAIDIGIAGGADSSSV 125 (430)
T ss_pred CCCCEEEEeeeEcccC
Confidence 9999999999999985
No 109
>PRK06504 acetyl-CoA acetyltransferase; Provisional
Probab=98.56 E-value=3.2e-07 Score=96.64 Aligned_cols=94 Identities=14% Similarity=0.263 Sum_probs=80.3
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEeeccC-CCC-CCcHHHHHHHHcCCCCCceeeEecCCCcchHHHHHHHHHHHHh
Q 011007 162 AELVIFSAMDSLLQKTGLKPKDIDILIVNCSL-FSP-TPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLLQ 239 (496)
Q Consensus 162 a~~la~~Aa~~aL~~agi~p~dID~LI~~ss~-~~~-~Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL~ 239 (496)
+.+|+..|++++|+++|++|+|||.+|+.+.. ... .+..+..+.-.-|++.+++++.++ .+|++|+.|+..|.+.++
T Consensus 26 ~~~L~~~a~~~al~~a~l~~~~Id~vi~G~~~~~~~~~~~~ar~~~l~~gl~~~vP~~tV~-~~CaSG~~Ai~~A~~~I~ 104 (390)
T PRK06504 26 PADLAAQVLDALVDRSGADPALIEDVIMGCVSQVGEQATNVARNAVLASKLPESVPGTSID-RQCGSSQQALHFAAQAVM 104 (390)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCCCceEEEe-chhhHHHHHHHHHHHHHH
Confidence 68999999999999999999999999998753 211 244554444445887689999999 699999999999999999
Q ss_pred cCCCCEEEEEEECCCCC
Q 011007 240 VHPNSNAVVVSTEIITP 256 (496)
Q Consensus 240 ~~~~~~aLVVs~E~~s~ 256 (496)
+|..+.+||++.|.+|.
T Consensus 105 sG~~dvvLagGvEsmS~ 121 (390)
T PRK06504 105 SGTMDIVIAAGVESMTR 121 (390)
T ss_pred CCCCCEEEEeeeeecCC
Confidence 99999999999999985
No 110
>PRK06157 acetyl-CoA acetyltransferase; Validated
Probab=98.56 E-value=2.9e-07 Score=97.29 Aligned_cols=93 Identities=19% Similarity=0.179 Sum_probs=78.8
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEeeccCC-CCCCcHHHHHHHHcCCCCCceeeEecCCCcchHHHHHHHHHHHHhc
Q 011007 162 AELVIFSAMDSLLQKTGLKPKDIDILIVNCSLF-SPTPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLLQV 240 (496)
Q Consensus 162 a~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~-~~~Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL~~ 240 (496)
..+|+.+|++++|+++|++++|||.+++.+... +........+.+.+|++ ..+++.++ ++|++++.++..|...+++
T Consensus 27 ~~~L~~ea~~~AL~dagl~~~dID~v~vg~~~~~~~~~~~~~~~a~~lGl~-~~~~~~v~-~~c~sg~~ai~~A~~~I~s 104 (398)
T PRK06157 27 AEDLMVEAFLEALADAGIEPKDIDAAWFGTHYDEIGSGKSGTPLSRALRLP-NIPVTRVE-NFCATGSEAFRGAVYAVAS 104 (398)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccchhHHHHHHcCCC-CCCEEEEe-cccHHHHHHHHHHHHHHHC
Confidence 578999999999999999999999999876422 21122235688899998 58899999 6999999999999999999
Q ss_pred CCCCEEEEEEECCCCC
Q 011007 241 HPNSNAVVVSTEIITP 256 (496)
Q Consensus 241 ~~~~~aLVVs~E~~s~ 256 (496)
|..+.+||++.|..|.
T Consensus 105 G~~d~vlv~G~e~~s~ 120 (398)
T PRK06157 105 GAYDIALALGVEKLKD 120 (398)
T ss_pred CCCCEEEEEEEeeccc
Confidence 9999999999998764
No 111
>PF00109 ketoacyl-synt: Beta-ketoacyl synthase, N-terminal domain; InterPro: IPR014030 Beta-ketoacyl-ACP synthase 2.3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the N-terminal domain of beta-ketoacyl-ACP synthases. ; PDB: 1J3N_B 3KZU_C 1W0I_A 2IX4_A 1F91_B 2BYZ_D 2AQB_C 2BZ3_C 1H4F_C 2VB9_B ....
Probab=98.56 E-value=2.4e-07 Score=91.18 Aligned_cols=119 Identities=20% Similarity=0.367 Sum_probs=83.7
Q ss_pred HHHHHHHHHHHHHHHcCCCcCC------cCEEEeeccCCC-----------------C------CC-cHHHHHHHHcCCC
Q 011007 162 AELVIFSAMDSLLQKTGLKPKD------IDILIVNCSLFS-----------------P------TP-SLSAMVINKYKLR 211 (496)
Q Consensus 162 a~~la~~Aa~~aL~~agi~p~d------ID~LI~~ss~~~-----------------~------~P-s~a~~I~~~Lgl~ 211 (496)
...++..|+.+||+++|+++++ +.+++-++..++ + .| ..+..|+..+|++
T Consensus 87 ~~~~~l~aa~~Al~dAg~~~~~~~~~~r~gv~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~ 166 (254)
T PF00109_consen 87 QSRLALAAAREALEDAGLDPDDLDGERRVGVFVGSSSGDYEFYRALDEDGETPRDVSPWFVPNTLPNSAAGRIAILFGLR 166 (254)
T ss_dssp HHHHHHHHHHHHHHHHTSTGGGHTGGGTEEEEEEESSSHHHHHHHHHHHTTCGGGSHTTHHHHHSTTHHHHHHHHHHTB-
T ss_pred hhhHHHHHhhhhcccccccccccccccceeeccccccccccccccccccccccccccccccCcccccccccchhhhcCCC
Confidence 6789999999999999999853 444443222210 1 22 3577899999997
Q ss_pred CCceeeEecCCCcchHHHHHHHHHHHHhcCCCCEEEEEEEC-CCCC---------CCccCC------Ccccccccccccc
Q 011007 212 SNIKSFNLSGMGCSAGLISIDLARDLLQVHPNSNAVVVSTE-IITP---------NYYQGN------ERAMLLPNCLFRM 275 (496)
Q Consensus 212 ~~~~~~dl~g~gCsg~l~al~lA~~lL~~~~~~~aLVVs~E-~~s~---------~~~~~~------dr~~l~~~~lfgD 275 (496)
. +++.++ .+|++++.||+.|.++|+.|..+.|||.++| .++. .....+ |+.. ...++|+
T Consensus 167 G--~~~tv~-~acaSgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~~s~~~~~~pf~~~~--~G~v~gE 241 (254)
T PF00109_consen 167 G--PSYTVS-TACASGLAALEAAYRAIRSGEADVALVGGVDAPLSPFILAGFSALGALSADGPCRPFDPFA--DGFVLGE 241 (254)
T ss_dssp S--SEEEEE--GGGHHHHHHHHHHHHHHTTSSSEEEEEEEE--SSHHHHHHHHHTTBB-TTSGGGSTBTTB---SB-BB-
T ss_pred C--cccccc-ccccccccccchhccccccccccccccccccccccccccccccccccccccccccccCCCC--CCEEEEC
Confidence 4 688899 4999999999999999999999999999999 4443 111111 1111 3579999
Q ss_pred ccEEEEEecc
Q 011007 276 GGAAILLSNR 285 (496)
Q Consensus 276 GAaA~lLs~~ 285 (496)
||+++||++.
T Consensus 242 Ga~~~vLe~~ 251 (254)
T PF00109_consen 242 GAGALVLERL 251 (254)
T ss_dssp EEEEEEEEEH
T ss_pred ceEEEEEEEh
Confidence 9999999864
No 112
>PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed
Probab=98.54 E-value=3e-07 Score=96.79 Aligned_cols=94 Identities=16% Similarity=0.177 Sum_probs=82.3
Q ss_pred HHHHHHHHHHHHHHH-cCCCcCCcCEEEeeccCC-CC-CCcHHHHHHHHcCCCCCceeeEecCCCcchHHHHHHHHHHHH
Q 011007 162 AELVIFSAMDSLLQK-TGLKPKDIDILIVNCSLF-SP-TPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLL 238 (496)
Q Consensus 162 a~~la~~Aa~~aL~~-agi~p~dID~LI~~ss~~-~~-~Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL 238 (496)
+++|+..+++++|++ +|++|+|||.+|+++... .. .+..+..+....|++..++++.++ .+|++++.|+..|...+
T Consensus 27 ~~~L~~~~~~~al~~~agl~~~~Id~vi~g~~~~~~~~g~~~ar~~~~~~Gl~~~~p~~~V~-~~caSG~~Ai~~A~~~I 105 (387)
T PRK08947 27 AEDLSAHLMRSLLARNPALDPAEIDDIIWGCVQQTLEQGFNIARNAALLAGIPHSVPAVTVN-RLCGSSMQALHDAARAI 105 (387)
T ss_pred HHHHHHHHHHHHHHhccCcChHHhCeEEEEeccccccccccHHHHHHHHcCCCCCCcceeee-chhHHHHHHHHHHHHHH
Confidence 688999999999997 699999999999987642 22 244566788899998679999999 69999999999999999
Q ss_pred hcCCCCEEEEEEECCCCC
Q 011007 239 QVHPNSNAVVVSTEIITP 256 (496)
Q Consensus 239 ~~~~~~~aLVVs~E~~s~ 256 (496)
++|..+.+||++.|.+|.
T Consensus 106 ~sG~~d~vlv~G~E~ms~ 123 (387)
T PRK08947 106 MTGDGDVFLIGGVEHMGH 123 (387)
T ss_pred HCCCCCEEEEcccccccc
Confidence 999999999999999885
No 113
>PTZ00455 3-ketoacyl-CoA thiolase; Provisional
Probab=98.51 E-value=5.7e-07 Score=96.08 Aligned_cols=94 Identities=22% Similarity=0.293 Sum_probs=79.7
Q ss_pred HHHHHHHHHHHHHHHcCCCcCC--cCEEEeeccCC---CCCCcHHHHHHHHcCCC------CCceeeEecCCCcchHHHH
Q 011007 162 AELVIFSAMDSLLQKTGLKPKD--IDILIVNCSLF---SPTPSLSAMVINKYKLR------SNIKSFNLSGMGCSAGLIS 230 (496)
Q Consensus 162 a~~la~~Aa~~aL~~agi~p~d--ID~LI~~ss~~---~~~Ps~a~~I~~~Lgl~------~~~~~~dl~g~gCsg~l~a 230 (496)
..+|+.+|++++|+++|++|+| ||.+|+++... ...+..+..+...+|++ ..++++.++ .+|++++.|
T Consensus 48 ~~eL~~~a~~~al~~agl~~~d~~ID~vi~G~~~~~~~~~~~~~a~~~~~~~gl~~~~~gl~~~p~~~V~-~~caSG~~A 126 (438)
T PTZ00455 48 LEELLATAIQGTLENTGLDGKAALVDKVVVGNFLGELFSSQGHLGPAAVGSLGQSGASNALLYKPAMRVE-GACASGGLA 126 (438)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCcCEEEEEeccccccccccchHHHHHHhccCcccccccCCCceeEEE-CcCHHHHHH
Confidence 6789999999999999999999 99999876421 12355666777666554 368899999 599999999
Q ss_pred HHHHHHHHhcCCCCEEEEEEECCCCC
Q 011007 231 IDLARDLLQVHPNSNAVVVSTEIITP 256 (496)
Q Consensus 231 l~lA~~lL~~~~~~~aLVVs~E~~s~ 256 (496)
+..|...+++|..+.+||++.|.+|.
T Consensus 127 i~~A~~~I~sG~~dvvlv~G~E~ms~ 152 (438)
T PTZ00455 127 VQSAWEALLAGTSDIALVVGVEVQTT 152 (438)
T ss_pred HHHHHHHHHCCCCCEEEEEEEeeccc
Confidence 99999999999999999999999875
No 114
>PRK06365 acetyl-CoA acetyltransferase; Provisional
Probab=98.50 E-value=4.7e-07 Score=96.61 Aligned_cols=93 Identities=17% Similarity=0.104 Sum_probs=78.1
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEeeccCC-CCCCcHHH-HHHHHcCCCCCceeeEecCCCcchHHHHHHHHHHHHh
Q 011007 162 AELVIFSAMDSLLQKTGLKPKDIDILIVNCSLF-SPTPSLSA-MVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLLQ 239 (496)
Q Consensus 162 a~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~-~~~Ps~a~-~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL~ 239 (496)
..+|+.+|++++|+++|++++|||.+|+++..+ ...+..+. .++..+|++ .++++.+. .+|+++..++..|...|+
T Consensus 37 ~~eL~~eA~~~Al~dagl~~~dID~vv~~~~~~~~~g~~~~~~~~~~~lGl~-~~~~~~v~-~~~aSg~~ai~~A~~~I~ 114 (430)
T PRK06365 37 FRERVKKAFDYAMNDAGLTLADIDGSVASYFSDHFQRQLLAGIMVQDYLGLV-PKPSKRIE-GGGATGGLAFQAGYEEIA 114 (430)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHcCEEEEecccccccccchhhHHHHHhcCCC-CCceEEEe-CCcHHHHHHHHHHHHHHH
Confidence 478999999999999999999999988766432 22223333 467999998 58999999 599999999999999999
Q ss_pred cCCCCEEEEEEECCCCC
Q 011007 240 VHPNSNAVVVSTEIITP 256 (496)
Q Consensus 240 ~~~~~~aLVVs~E~~s~ 256 (496)
+|..+.|||+++|..|.
T Consensus 115 sG~~~~vLv~G~e~~s~ 131 (430)
T PRK06365 115 SGRMDCVAVYGFETMSH 131 (430)
T ss_pred cCCCCEEEEEEeeeccc
Confidence 99999999999997653
No 115
>PRK14691 3-oxoacyl-(acyl carrier protein) synthase II; Provisional
Probab=98.48 E-value=1.5e-05 Score=82.57 Aligned_cols=119 Identities=13% Similarity=0.091 Sum_probs=88.3
Q ss_pred HHHHHHHHHHHHHHHcCC--CcCCcCEEEeeccCC-----------------CCCC---------cHHHHHHHHcCCCCC
Q 011007 162 AELVIFSAMDSLLQKTGL--KPKDIDILIVNCSLF-----------------SPTP---------SLSAMVINKYKLRSN 213 (496)
Q Consensus 162 a~~la~~Aa~~aL~~agi--~p~dID~LI~~ss~~-----------------~~~P---------s~a~~I~~~Lgl~~~ 213 (496)
...++..|++++++++|+ +++++++++-++... ...| ..+..|...+|++.
T Consensus 4 ~~~~~~~a~~~a~~~a~~~~~~~r~Gv~~G~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~~~l~G- 82 (342)
T PRK14691 4 WWRYKWITFHPSLTHADNTEKQERTATIIGAGIGGFPAIAHAVRTSDSRGPKRLSPFTVPSFLVNLAAGHVSIKHHFKG- 82 (342)
T ss_pred HHHHHHHHHHHHHHhCCCCCCcccEEEEEecCcccHHHHHHHHHHHHhcCccccChhHHhhhhhhHHHHHHHHHhCCCC-
Confidence 457889999999999995 677887776443111 0011 35778888999974
Q ss_pred ceeeEecCCCcchHHHHHHHHHHHHhcCCCCEEEEEEECCCCCCC---------------c--------c-CCCcccccc
Q 011007 214 IKSFNLSGMGCSAGLISIDLARDLLQVHPNSNAVVVSTEIITPNY---------------Y--------Q-GNERAMLLP 269 (496)
Q Consensus 214 ~~~~dl~g~gCsg~l~al~lA~~lL~~~~~~~aLVVs~E~~s~~~---------------~--------~-~~dr~~l~~ 269 (496)
+++.++ .+|++++.||..|.++|+.|..+.+||.++|.....+ . + ..+| .
T Consensus 83 -p~~ti~-~aCaSg~~Al~~A~~~I~~G~~d~~ivgg~d~~~~~~~~~~f~~~~~ls~~~~~~p~~~~rPFd~~r----~ 156 (342)
T PRK14691 83 -PIGAPV-TACAAGVQAIGDAVRMIRNNEADVALCGGAEAVIDTVSLAGFAAARALSTHFNSTPEKASRPFDTAR----D 156 (342)
T ss_pred -Cccccc-cHhHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHhhhhhcCCCCCCCcCCCCCCCCC----C
Confidence 788899 5999999999999999999999999999998742100 0 0 0122 2
Q ss_pred ccccccccEEEEEeccCC
Q 011007 270 NCLFRMGGAAILLSNRRR 287 (496)
Q Consensus 270 ~~lfgDGAaA~lLs~~~~ 287 (496)
..++||||+++||++.+.
T Consensus 157 G~v~gEGAa~lvLes~~~ 174 (342)
T PRK14691 157 GFVMGEGAGLLIIEELEH 174 (342)
T ss_pred CccccceEEEEEEeeHHH
Confidence 578999999999997653
No 116
>TIGR02445 fadA fatty oxidation complex, beta subunit FadA. This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (TIGR02437). The FadBA complex is the major complex active for beta-oxidation of fatty acids in E. coli.
Probab=98.47 E-value=4.4e-07 Score=95.45 Aligned_cols=94 Identities=12% Similarity=0.132 Sum_probs=81.1
Q ss_pred HHHHHHHHHHHHHHH-cCCCcCCcCEEEeeccCC-CC-CCcHHHHHHHHcCCCCCceeeEecCCCcchHHHHHHHHHHHH
Q 011007 162 AELVIFSAMDSLLQK-TGLKPKDIDILIVNCSLF-SP-TPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLL 238 (496)
Q Consensus 162 a~~la~~Aa~~aL~~-agi~p~dID~LI~~ss~~-~~-~Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL 238 (496)
+.+|+.+|++++|++ +|++|++||.+++++... .. .+..+..+....|++..++++.++ .+|++++.|+..|.+.+
T Consensus 25 ~~~L~~~a~~~al~~~agl~~~~Id~v~~G~~~~~~~~g~~~ar~~~~~~g~~~~~p~~tV~-~~CaSG~~Ai~~Aa~~I 103 (385)
T TIGR02445 25 AEDLSAHLMSKLLARNPKVDPAEVEDIYWGCVQQTLEQGFNIARNAALLAQIPHTSAAVTVN-RLCGSSMQALHDAARAI 103 (385)
T ss_pred HHHHHHHHHHHHHHhccCCCHHHcCEEEEecccccccccchHHHHHHHHCCCCCCcchhhhh-hhhHHHHHHHHHHHHHH
Confidence 689999999999997 599999999999987532 21 234566666678998779999999 69999999999999999
Q ss_pred hcCCCCEEEEEEECCCCC
Q 011007 239 QVHPNSNAVVVSTEIITP 256 (496)
Q Consensus 239 ~~~~~~~aLVVs~E~~s~ 256 (496)
++|..+.+|+++.|.+|.
T Consensus 104 ~sG~~d~vlagG~E~ms~ 121 (385)
T TIGR02445 104 MTGDADVCLVGGVEHMGH 121 (385)
T ss_pred HCCCCCEEEEeeehhccc
Confidence 999999999999999885
No 117
>PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=98.47 E-value=7.5e-06 Score=86.51 Aligned_cols=119 Identities=18% Similarity=0.169 Sum_probs=86.8
Q ss_pred HHHHHHHHHHHHHHHcCCCc-----CCcCEEEeeccCC--C---------------------------CCC---------
Q 011007 162 AELVIFSAMDSLLQKTGLKP-----KDIDILIVNCSLF--S---------------------------PTP--------- 198 (496)
Q Consensus 162 a~~la~~Aa~~aL~~agi~p-----~dID~LI~~ss~~--~---------------------------~~P--------- 198 (496)
...++..|++++|+++|+++ +++++++-++... . ..|
T Consensus 73 ~~~~a~~Aa~~Al~dAGl~~~~~~~~r~GvivGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n 152 (398)
T PRK06519 73 WQRLGTYAAGLALDDAGIKGNEELLSTMDMIVAAGGGERDIAVDTAILNEARKRNDRGVLLNERLMTELRPTLFLAQLSN 152 (398)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCCCccceEEEEEeCCCchhHHHhhhhhhcccchhHHHHHHHhcCCCccChhhhhhhhhh
Confidence 56789999999999999854 3455555433211 0 112
Q ss_pred cHHHHHHHHcCCCCCceeeEecCCCcchHHHHHHHHHHHHhcCCCCEEEEEEECCC-CC---------CCcc------CC
Q 011007 199 SLSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLLQVHPNSNAVVVSTEII-TP---------NYYQ------GN 262 (496)
Q Consensus 199 s~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL~~~~~~~aLVVs~E~~-s~---------~~~~------~~ 262 (496)
..+..|...+|++. +++.++ .+|++++.||..|.++|+.+..+.+||.++|.. +. .... ..
T Consensus 153 ~~a~~is~~~gl~G--p~~ti~-~acaSg~~Ai~~A~~~I~~G~~d~~lvGG~d~~~~~~~~~~~~~~~~ls~~~~~p~~ 229 (398)
T PRK06519 153 LLAGNISIVHKVTG--SSRTFM-GEESAGVSAIEIAFARIASGQSDHALVGGAYNAERPDMLLLYELGGLLLKGGWAPVW 229 (398)
T ss_pred HHHHHHHHHhCCCC--cccccc-CCccHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHHcCccCCCCCCchh
Confidence 25677888999974 788999 599999999999999999999999999999862 21 0110 01
Q ss_pred -----CccccccccccccccEEEEEeccCC
Q 011007 263 -----ERAMLLPNCLFRMGGAAILLSNRRR 287 (496)
Q Consensus 263 -----dr~~l~~~~lfgDGAaA~lLs~~~~ 287 (496)
+|+ ..+.|+||+++||++.+.
T Consensus 230 d~~~~~r~----G~v~GEGAa~lvLE~~~~ 255 (398)
T PRK06519 230 SRGGEDGG----GFILGSGGAFLVLESREH 255 (398)
T ss_pred ccCccCCC----CeeeeceEEEEEEeeHHH
Confidence 133 567899999999998653
No 118
>PRK09268 acetyl-CoA acetyltransferase; Provisional
Probab=98.41 E-value=1.2e-06 Score=93.26 Aligned_cols=94 Identities=15% Similarity=0.257 Sum_probs=79.7
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEeeccCC-CCCCcHHHHHHHHcCCCCCceeeEecCCCcchHHHHHHHHHHHHhc
Q 011007 162 AELVIFSAMDSLLQKTGLKPKDIDILIVNCSLF-SPTPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLLQV 240 (496)
Q Consensus 162 a~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~-~~~Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL~~ 240 (496)
+.+|+..|++++|+++|++++|||.+|+++... ...+..+..+.-..|++...+++.++ ++|++++.++..|...+++
T Consensus 31 ~~eL~~~a~~~al~~agl~~~~Id~vv~G~~~~~~~~~~~~r~~~l~~gl~~~~p~~~V~-~~CaSG~~ai~~A~~~I~s 109 (427)
T PRK09268 31 NQDMLTAALDGLVDRFGLQGERLGEVVAGAVLKHSRDFNLTRECVLGSALSPYTPAYDLQ-QACGTGLEAAILVANKIAL 109 (427)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCccccHHHHHHHHcCCCCCCceeeee-chhhHHHHHHHHHHHHHHC
Confidence 679999999999999999999999999987532 11244556655556676568999999 6999999999999999999
Q ss_pred CCCCEEEEEEECCCCC
Q 011007 241 HPNSNAVVVSTEIITP 256 (496)
Q Consensus 241 ~~~~~aLVVs~E~~s~ 256 (496)
|..+.+||++.|.+|.
T Consensus 110 G~~d~vlvgG~E~ms~ 125 (427)
T PRK09268 110 GQIDSGIAGGVDTTSD 125 (427)
T ss_pred CCCCEEEEeeEEccCC
Confidence 9999999999999885
No 119
>PRK07801 acetyl-CoA acetyltransferase; Provisional
Probab=98.38 E-value=1.3e-06 Score=91.76 Aligned_cols=94 Identities=14% Similarity=0.246 Sum_probs=76.4
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEeeccC-CCC-CCcHHHHHHHHcCCCCCceeeEecCCCcchHHHHHHHHHHHHh
Q 011007 162 AELVIFSAMDSLLQKTGLKPKDIDILIVNCSL-FSP-TPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLLQ 239 (496)
Q Consensus 162 a~~la~~Aa~~aL~~agi~p~dID~LI~~ss~-~~~-~Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL~ 239 (496)
..+|+.+|++++|+++|++|+|||.+|+.+.. ... .+..+..+.-..|++..+.++.++ .+|++++.++..|.+.|+
T Consensus 26 ~~~L~~~a~~~al~dagl~~~~ID~vv~g~~~~~~~~~~~~~~~~~l~~gl~~~~p~~~v~-~acaSg~~Av~~Aa~~I~ 104 (382)
T PRK07801 26 PADLGAHVLKGLVDRTGIDPAAVDDVIFGCVDTIGPQAGNIARTSWLAAGLPEEVPGVTVD-RQCGSSQQAIHFAAQAVM 104 (382)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHcCEEEEEeeccCCcccccHHHHHHHHcCCCCCCceeeec-chhhhHHHHHHHHHHHHH
Confidence 57899999999999999999999999987542 111 133344444457776567889999 699999999999999999
Q ss_pred cCCCCEEEEEEECCCCC
Q 011007 240 VHPNSNAVVVSTEIITP 256 (496)
Q Consensus 240 ~~~~~~aLVVs~E~~s~ 256 (496)
+|..+.+||++.|.+|.
T Consensus 105 sG~~d~vLv~G~e~ms~ 121 (382)
T PRK07801 105 SGTQDLVVAGGVQNMSQ 121 (382)
T ss_pred CCCCCEEEEcchhhhcC
Confidence 99999999999997754
No 120
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=98.27 E-value=5.7e-05 Score=95.11 Aligned_cols=215 Identities=14% Similarity=0.151 Sum_probs=127.5
Q ss_pred HHHHHHHHcCCCCCceeeEecCCCcchHHHHHHHHHHHHhcCCCCEEEEEEECCCCC-C---------Ccc-------CC
Q 011007 200 LSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLLQVHPNSNAVVVSTEIITP-N---------YYQ-------GN 262 (496)
Q Consensus 200 ~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL~~~~~~~aLVVs~E~~s~-~---------~~~-------~~ 262 (496)
.+.+|.++||++. +++.++ .+|++++.||++|.+.|+.|..+.+||.+++.... . ... ..
T Consensus 185 ~A~RIS~~f~L~G--ps~tVd-tACsSSL~Al~~A~~~L~~G~~D~alvGGv~~~~~p~~~~~fs~~~~lS~~g~crpFD 261 (2582)
T TIGR02813 185 ISGRIANRFDLGG--MNCVVD-AACAGSLAAIRMALSELLEGRSEMMITGGVCTDNSPFMYMSFSKTPAFTTNEDIQPFD 261 (2582)
T ss_pred HHHHHHHHhCCCC--Cccccc-chhHHHHHHHHHHHHHHHcCCCCEEEEecceeeCCHHHHHHHHhccCcCCCCCccCCC
Confidence 5788999999984 789999 69999999999999999999999999988876321 0 000 01
Q ss_pred CccccccccccccccEEEEEeccCCcccccceeEeeEEE-EEecCCcccccceeecccCCCceeeeechhHHHHHHHHhh
Q 011007 263 ERAMLLPNCLFRMGGAAILLSNRRRNRSRAKYRLVHVVR-THKGADDKAYRCVFEEEDKEGKVGISLSKDLMAIAGEALK 341 (496)
Q Consensus 263 dr~~l~~~~lfgDGAaA~lLs~~~~~~~~~~~~L~~~~~-t~~~~d~~~~~~~~~~~d~~G~~g~~ls~d~~~v~g~~l~ 341 (496)
.+. ..++.|+|+++++|.+-..-.++ +=++..+++ +...+|++. ..++.+ ...|
T Consensus 262 ~~a---dG~v~GEGag~vvLkrL~dA~~d-Gd~IyAvI~G~g~~~DG~~-~~itaP----------------~~~g---- 316 (2582)
T TIGR02813 262 IDS---KGMMIGEGIGMMALKRLEDAERD-GDRIYAVIKGVGASSDGKF-KSIYAP----------------RPEG---- 316 (2582)
T ss_pred CCC---CcccccceEEEEEeCcHHHHHhC-CCcEEEEEEEEEEcCCCCC-CCCcCC----------------CHHH----
Confidence 111 25789999999999875432111 112222222 222333321 111111 1111
Q ss_pred hhhhhcCCCccchhHHHHHHHHHHHHhhhc-cccCCcccchhccccEEEeccCCHHHH-----HHHHHHcCCChh---hH
Q 011007 342 SNITTIGPLVLPASEQLLFLMTLIGRKIFN-PKWKPYIPDFKQAFEHFCIHAGGRAVI-----DELQKNLQLSAE---HV 412 (496)
Q Consensus 342 ~~i~~~gp~vlp~~e~~~~~~~~~~~~v~~-~~~~~~~p~~~~did~f~~H~~~~~v~-----~~i~~~Lgl~~e---~~ 412 (496)
|. ...++.++ ..+. .++|+++..|-.|-.+- +.+.+.++-... .+
T Consensus 317 ---------------q~-----~~i~~Al~~Agi~------p~~I~yIeaHGTGT~~gD~~E~~Al~~vf~~~~~~~~~~ 370 (2582)
T TIGR02813 317 ---------------QA-----KALKRAYDDAGFA------PHTCGLIEAHGTGTAAGDVAEFGGLVSVFSQDNDQKQHI 370 (2582)
T ss_pred ---------------HH-----HHHHHHHHHcCCC------HHHCCEEEecCCCCCCCCHHHHHHHHHHhcccccCCCCc
Confidence 00 01133333 2233 38999999999775553 445556654221 11
Q ss_pred hhhhhhhcccCCccCCchHHHHHHH---HHhCCCC--------------------------------CC--CEEEEEeec
Q 011007 413 EASRMTLHRFGNTSSSSLWYEMSYI---EEKGRMK--------------------------------KG--DRVWQIAFG 455 (496)
Q Consensus 413 ~~S~~~l~r~GNtsSaSi~~~La~~---~~~g~i~--------------------------------~G--d~Vll~~fG 455 (496)
. --.+=..+||+-+++=...|... +++|.+. .| .++..-+||
T Consensus 371 ~-vgSvKs~iGH~~~AAG~a~lik~~lal~~~~iPp~~~~~~pnp~~~~~~~~~~v~~~~~pw~~~~~~~~r~a~vnsfG 449 (2582)
T TIGR02813 371 A-LGSVKSQIGHTKSTAGTAGMIKAVLALHHKVLPPTINVDQPNPKLDIENSPFYLNTETRPWMQREDGTPRRAGISSFG 449 (2582)
T ss_pred e-eeccccccccchHhHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCccccceeecCCcccCcccCCCCccEEEEeCcc
Confidence 1 01122468999999888777653 3333211 11 356778899
Q ss_pred hhHhhhheeeEeec
Q 011007 456 SGFKCNSAVWKCNK 469 (496)
Q Consensus 456 ~G~~~~sav~r~~~ 469 (496)
-|-+-..++++--.
T Consensus 450 fGGtN~hvvlee~~ 463 (2582)
T TIGR02813 450 FGGTNFHMVLEEYS 463 (2582)
T ss_pred CCCeeEEEEEeecC
Confidence 98888888888653
No 121
>PRK07937 lipid-transfer protein; Provisional
Probab=98.19 E-value=0.00017 Score=75.13 Aligned_cols=88 Identities=13% Similarity=0.023 Sum_probs=65.4
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCEEEeeccCCCCC--CcHHHHHHHHcCCCCCceeeEecCCCcchHHHHHHHHHHHHhc
Q 011007 163 ELVIFSAMDSLLQKTGLKPKDIDILIVNCSLFSPT--PSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLLQV 240 (496)
Q Consensus 163 ~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~--Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL~~ 240 (496)
.+|+.+|++++|+++|++++|||.++.+++ +... ......+...+|+.+......+. +++..++..|...+++
T Consensus 25 ~el~~eA~~~Al~DAgl~~~dID~~~~~~~-~~~~~~~~~~~~~~~~~G~~~~~~~~~v~----~~g~~a~~~A~~aI~s 99 (352)
T PRK07937 25 VEMLMPCFAELYAELGITKSDIGFWCSGSS-DYLAGRAFSFISAIDSIGAVPPINESHVE----MDAAWALYEAWVKLLT 99 (352)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEcc-ccccccccchhhHHhhccCCCCCceEEec----CcHHHHHHHHHHHHhc
Confidence 589999999999999999999998854333 2211 11123455667875344455555 3577799999999999
Q ss_pred CCCCEEEEEEECCCC
Q 011007 241 HPNSNAVVVSTEIIT 255 (496)
Q Consensus 241 ~~~~~aLVVs~E~~s 255 (496)
|..++|||++.|..+
T Consensus 100 G~~d~VLv~g~~k~~ 114 (352)
T PRK07937 100 GEVDTALVYGFGKSS 114 (352)
T ss_pred CCCCEEEEEEecccC
Confidence 999999999999754
No 122
>PRK08142 acetyl-CoA acetyltransferase; Provisional
Probab=98.18 E-value=6.6e-06 Score=86.66 Aligned_cols=89 Identities=15% Similarity=0.044 Sum_probs=73.8
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCCceeeEecCCCcchHHHHHHHHHHHHhcC
Q 011007 162 AELVIFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLLQVH 241 (496)
Q Consensus 162 a~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL~~~ 241 (496)
..+|+.+|++++|+++|++++|||.++..+... +.....++..+|++ ..+...+. .||+++..++..|...+++|
T Consensus 25 ~~~L~~eA~~~Al~DAgl~~~dID~~~~~~~~~---~~~~~~~~~~lGl~-~~~~~~v~-~gg~s~~~a~~~A~~~I~sG 99 (388)
T PRK08142 25 VAQLHAEVAKGALADAGLSLADVDGYFCAGDAP---GLGPASMVDYLGLK-LRHVDSTE-TGGSSYLAHVGHAAQAIAAG 99 (388)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCC---CccHHHHHHhCCCC-Ceeecccc-CCcHHHHHHHHHHHHHHHcC
Confidence 478999999999999999999999987532211 11124588999997 56788888 59999999999999999999
Q ss_pred CCCEEEEEEECCCC
Q 011007 242 PNSNAVVVSTEIIT 255 (496)
Q Consensus 242 ~~~~aLVVs~E~~s 255 (496)
..+.||||+.|..+
T Consensus 100 ~~d~vLvvg~e~~~ 113 (388)
T PRK08142 100 KCSVALITLAGRPR 113 (388)
T ss_pred CCCEEEEEeeeecc
Confidence 99999999999743
No 123
>PRK07855 lipid-transfer protein; Provisional
Probab=97.99 E-value=2.8e-05 Score=81.89 Aligned_cols=85 Identities=16% Similarity=0.120 Sum_probs=70.7
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCCceeeEecCCCcchHHHHHHHHHHHHhcC
Q 011007 162 AELVIFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLLQVH 241 (496)
Q Consensus 162 a~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL~~~ 241 (496)
..+|+.+|++++|+++|++++|||.+++++. . ..+. ..+++.+|+++-....++. .||+++..++..|...+++|
T Consensus 24 ~~~L~~eA~~~Al~DAgl~~~dID~~~~~~~-~-~~~~--~~l~~~lGl~~~~~~~~v~-~gg~sg~~~~~~A~~~I~sG 98 (386)
T PRK07855 24 ELRLACEAVLAALDDAGLAPSDVDGLVTFTM-D-TNPE--IAVARALGIGELKFFSRIH-YGGGAACATVQQAAMAVATG 98 (386)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEecC-c-cccH--HHHHHHCCCCCCcceeeec-CCcHHHHHHHHHHHHHHHCC
Confidence 4689999999999999999999999986432 1 1222 4588999997424456888 59999999999999999999
Q ss_pred CCCEEEEEEE
Q 011007 242 PNSNAVVVST 251 (496)
Q Consensus 242 ~~~~aLVVs~ 251 (496)
..+.|||+++
T Consensus 99 ~~d~vLv~g~ 108 (386)
T PRK07855 99 VADVVVCYRA 108 (386)
T ss_pred CCCEEEEEee
Confidence 9999999987
No 124
>COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.89 E-value=0.00053 Score=72.66 Aligned_cols=120 Identities=17% Similarity=0.255 Sum_probs=87.5
Q ss_pred hHHHHHHHHHHHHHHHcCCC-cCCcC--EEE-eeccC---CC----------------C--------CC-cHHHHHHHHc
Q 011007 161 EAELVIFSAMDSLLQKTGLK-PKDID--ILI-VNCSL---FS----------------P--------TP-SLSAMVINKY 208 (496)
Q Consensus 161 ea~~la~~Aa~~aL~~agi~-p~dID--~LI-~~ss~---~~----------------~--------~P-s~a~~I~~~L 208 (496)
....++..|+++|++++|++ ..+++ +-+ +.++. .. . .| ..+..++..+
T Consensus 70 ~~~~~a~~Aa~eAl~dAgl~~~~~~~~r~gv~iGsg~gg~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~vs~~~ 149 (412)
T COG0304 70 RFSQLAVVAAVEALEDAGLDNELNVDMRVGVAIGSGIGGLEDIEFDLDALLLEGLRKRISPFLVPKMLPNLAAGNVAIVF 149 (412)
T ss_pred HHHHHHHHHHHHHHHHcCCCcccccCccEEEEEeccCCCcchhhhHHHHHHhcCCccCcCchhhhhhccchHHHHHHHHh
Confidence 36789999999999999998 33443 222 22321 10 1 22 3466788889
Q ss_pred CCCCCceeeEecCCCcchHHHHHHHHHHHHhcCCCCEEEEEEECC-CC--------------CC-------Ccc-CCCcc
Q 011007 209 KLRSNIKSFNLSGMGCSAGLISIDLARDLLQVHPNSNAVVVSTEI-IT--------------PN-------YYQ-GNERA 265 (496)
Q Consensus 209 gl~~~~~~~dl~g~gCsg~l~al~lA~~lL~~~~~~~aLVVs~E~-~s--------------~~-------~~~-~~dr~ 265 (496)
|++. ..+.++ .+|+++..||..|.++|+.|..+.+++.++|. ++ .. +.+ ..+|+
T Consensus 150 g~~G--~~~~~~-tACatg~~AIg~A~~~I~~G~ad~~iaGG~e~~i~~~~i~gF~am~Alst~nd~p~~asrPfd~~Rd 226 (412)
T COG0304 150 GLKG--PNYTPV-TACATGAHAIGDAVRLIRLGKADVVIAGGAEAAITPLGIAGFEAMRALSTRNDDPEKASRPFDKNRD 226 (412)
T ss_pred CCCC--CcCChh-hhHHhHHHHHHHHHHHHHcCCCCEEEEcccccccCHHHHHHHHHHHHhccCCCCccccCCCCCCCCC
Confidence 9974 788899 59999999999999999999999999999977 22 21 111 12344
Q ss_pred ccccccccccccEEEEEeccCC
Q 011007 266 MLLPNCLFRMGGAAILLSNRRR 287 (496)
Q Consensus 266 ~l~~~~lfgDGAaA~lLs~~~~ 287 (496)
.+++|.||+++||+..+.
T Consensus 227 ----Gfv~gEGag~lVLE~~eh 244 (412)
T COG0304 227 ----GFVIGEGAGALVLEELEH 244 (412)
T ss_pred ----CEEEecceeEEEecChhh
Confidence 578999999999998764
No 125
>PF07451 SpoVAD: Stage V sporulation protein AD (SpoVAD); InterPro: IPR010894 This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long. This is one of six proteins encoded by the spoVA operon, which is transcribed exclusively in the forespore at about the time of dipicolinic acid (DPA) synthesis in the mother cell. The functions of the proteins encoded by the spoVA operon are unknown, but it has been suggested they are involved in DPA transport during sporulation [].; PDB: 3LMA_D 3LM6_A.
Probab=97.79 E-value=0.00024 Score=71.03 Aligned_cols=117 Identities=22% Similarity=0.261 Sum_probs=76.0
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCCceeeEecCCCcchHHHHHHHHHHHHhcCC
Q 011007 163 ELVIFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLLQVHP 242 (496)
Q Consensus 163 ~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL~~~~ 242 (496)
..|..+|++.+|+|++++++|||.++-.--....++ ++..++.|+++ -+.|.| +||.+.-+|.+|.-++..+-
T Consensus 52 ~~m~~~A~~~al~Ka~l~~~dId~~~aGDLlnQ~i~--s~f~ar~l~iP----f~Glyg-ACST~~e~l~laa~~vdgg~ 124 (329)
T PF07451_consen 52 SKMQKEAVELALKKAGLKKEDIDYLFAGDLLNQIIS--SSFAARDLGIP----FLGLYG-ACSTMMESLALAAMLVDGGF 124 (329)
T ss_dssp HHHHHHHHHHHHHHTT--GGG-SEEEEEETTCCCCH--HHHHHHHHT------EEEB---CCCHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHcCCCHHHCeEEEehhhhhhhHH--HHHHHHhcCCC----ccchhh-HHHHHHHHHHHHHHHHhCCC
Confidence 568899999999999999999999875433333333 47788888875 899997 99999999999999999998
Q ss_pred CCEEEEEEECCCCC---CCcc----CCCccccccccccccccEEEEEeccCCc
Q 011007 243 NSNAVVVSTEIITP---NYYQ----GNERAMLLPNCLFRMGGAAILLSNRRRN 288 (496)
Q Consensus 243 ~~~aLVVs~E~~s~---~~~~----~~dr~~l~~~~lfgDGAaA~lLs~~~~~ 288 (496)
.+++|+.++--... .|.. +..|.. +...---||+|+||++....
T Consensus 125 a~~vla~tSSH~~tAERQfR~P~EyG~Qrp~--tAqwTVTGaGa~il~~~~~~ 175 (329)
T PF07451_consen 125 ADYVLAATSSHFATAERQFRFPTEYGGQRPP--TAQWTVTGAGAAILSKEGSG 175 (329)
T ss_dssp -SEEEEEEEE-CCHHHHHT---GGGT----T--T--EE--EEEEEEEESS--S
T ss_pred cceEEEEeccccchhhhhccCchhccCCCCC--cccEEEeceEEEEEecCCCC
Confidence 89999887655442 1211 222331 33444578999999987653
No 126
>PRK06066 acetyl-CoA acetyltransferase; Provisional
Probab=97.79 E-value=0.00012 Score=76.96 Aligned_cols=89 Identities=15% Similarity=0.150 Sum_probs=68.1
Q ss_pred HHHHHHHHHHHHHHHcC-CCc-CCcCEEEeeccCCC-CCCcHHHHHHHHcCCCCCceeeEecCCCcchHHHHHHHHHHHH
Q 011007 162 AELVIFSAMDSLLQKTG-LKP-KDIDILIVNCSLFS-PTPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLL 238 (496)
Q Consensus 162 a~~la~~Aa~~aL~~ag-i~p-~dID~LI~~ss~~~-~~Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL 238 (496)
..+|+.+|++++|+++| +++ +|||.+++++.... ........++..+|+. ....+.+ |+++..++..|...+
T Consensus 25 ~~eL~~eA~~~Al~DAG~l~~~~dId~~~~~~~~~~~~~~~~~~~~~~~lg~~-~~~~~~v----~~sg~~a~~~A~~aV 99 (385)
T PRK06066 25 FREMMFEAASRAYKDAGNINPRRDVDSFISCQEDFWEGIAIADEFAPDQIGGA-MRPTMTV----AGDGLQGLAHAVMHI 99 (385)
T ss_pred HHHHHHHHHHHHHHhcCCCCChhcCCEEEEecCcccCcccccchhHHHHcccC-CCCeEEE----eCcHHHHHHHHHHHH
Confidence 57899999999999999 997 79999987542111 1111223466889985 2344444 778899999999999
Q ss_pred hcCCCCEEEEEEECCCC
Q 011007 239 QVHPNSNAVVVSTEIIT 255 (496)
Q Consensus 239 ~~~~~~~aLVVs~E~~s 255 (496)
++|..++|||++.|..+
T Consensus 100 ~sG~~d~vLv~g~~~~~ 116 (385)
T PRK06066 100 NSGLANVVVVEAHSKPS 116 (385)
T ss_pred HcCCCCEEEEEEEeecc
Confidence 99999999999999654
No 127
>COG0183 PaaJ Acetyl-CoA acetyltransferase [Lipid metabolism]
Probab=97.71 E-value=0.00014 Score=76.93 Aligned_cols=95 Identities=17% Similarity=0.290 Sum_probs=80.4
Q ss_pred HHHHHHHHHHHHHHHc--CCCcCCcCEEEeeccCC--CCCCcHHHHHHHHcCCCCCceeeEecCCCcchHHHHHHHHHHH
Q 011007 162 AELVIFSAMDSLLQKT--GLKPKDIDILIVNCSLF--SPTPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDL 237 (496)
Q Consensus 162 a~~la~~Aa~~aL~~a--gi~p~dID~LI~~ss~~--~~~Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~l 237 (496)
++++.....+..+++. ++++.+||.+|..|... ...+..+..++...|++.+++.+.++ .+|++++.|+..|...
T Consensus 27 ~e~l~~a~~~a~~~~~~~~vd~~~v~~~~~G~~~~~g~~~~~~ar~~a~~aGl~~~~p~~~V~-~~c~SG~~Av~~A~~~ 105 (392)
T COG0183 27 AEALGAALIDAGLERAPADVDAADVDDVILGCVLQAGEQGQNIARQAALAAGLPGSVPAVTVN-RACASGLAAVRLAAQA 105 (392)
T ss_pred HHHHHHHHHHHHhhhccccCCHHHhhhheeccccccccccccHHHHHHHHcCCCCCCCceEEe-ccchhHHHHHHHHHHH
Confidence 5666666666666544 68888899999887543 34667888999999999779999999 6999999999999999
Q ss_pred HhcCCCCEEEEEEECCCCCC
Q 011007 238 LQVHPNSNAVVVSTEIITPN 257 (496)
Q Consensus 238 L~~~~~~~aLVVs~E~~s~~ 257 (496)
+++|..+.+|+++.|++|..
T Consensus 106 I~sG~~dvvlagG~E~mS~~ 125 (392)
T COG0183 106 IASGEADVVLAGGVEKMSDA 125 (392)
T ss_pred HHCCCCCEEEEEeeeeccCC
Confidence 99999999999999999973
No 128
>KOG1390 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=97.40 E-value=0.00039 Score=69.67 Aligned_cols=94 Identities=15% Similarity=0.136 Sum_probs=81.4
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEeecc-CCCCCCcHHHHHHHHcCCCCCceeeEecCCCcchHHHHHHHHHHHHhc
Q 011007 162 AELVIFSAMDSLLQKTGLKPKDIDILIVNCS-LFSPTPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLLQV 240 (496)
Q Consensus 162 a~~la~~Aa~~aL~~agi~p~dID~LI~~ss-~~~~~Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL~~ 240 (496)
+.+|+..|++.+|+|++++|+|++-+|+.+. +-+.--..+.+.+=--||+-++.+..++ +.|++++.|+.+|.+-|+.
T Consensus 30 A~~Lgsvaikaalera~v~~~~v~eVi~GnVl~AnlGQapaRQaalgAGlp~sv~~tTvN-kvCaSgmKAv~laaQsI~~ 108 (396)
T KOG1390|consen 30 ATELGSVAIKAALERAVVPPSDVAEVIFGNVLSANLGQAPARQAALGAGLPYSVPATTVN-KVCASGMKAVILAAQSIQT 108 (396)
T ss_pred hhhHHHHHHHHHHHhcCCCHHHhhhhhhccccccccCcchHHHHHhhcCCCcceeeEeeh-hhhhhhHHHHHHHHHHHhc
Confidence 7899999999999999999999999998864 3333334456666666888889999999 8999999999999999999
Q ss_pred CCCCEEEEEEECCCCC
Q 011007 241 HPNSNAVVVSTEIITP 256 (496)
Q Consensus 241 ~~~~~aLVVs~E~~s~ 256 (496)
|..+.++..+.|.+|.
T Consensus 109 G~~divVaGGmEsMS~ 124 (396)
T KOG1390|consen 109 GHADIVVAGGMESMSN 124 (396)
T ss_pred CCccEEEecccchhcc
Confidence 9999999999999996
No 129
>COG3321 Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.35 E-value=0.0065 Score=71.85 Aligned_cols=121 Identities=14% Similarity=0.176 Sum_probs=86.1
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCE----EEeec-cCCCCCC-------------------cHHHHHHHHcCCCCCceeeE
Q 011007 163 ELVIFSAMDSLLQKTGLKPKDIDI----LIVNC-SLFSPTP-------------------SLSAMVINKYKLRSNIKSFN 218 (496)
Q Consensus 163 ~~la~~Aa~~aL~~agi~p~dID~----LI~~s-s~~~~~P-------------------s~a~~I~~~Lgl~~~~~~~d 218 (496)
.-|..+.+-++|+++|+.|+.+.. |..+. ..+|... -.+.+|...|+++ -+++.
T Consensus 92 qRllLe~aw~AlEdAG~~~~~l~g~~tgV~~g~~~~~y~~~~~~~~~~~~~~~~~g~~~~~~a~Risy~l~l~--GPs~~ 169 (1061)
T COG3321 92 QRLLLEVAWEALEDAGIYPDSLRGSATGVFAGASVADYLLLLLADDEAEPEYAITGNSSSVAAGRISYVLGLS--GPSVT 169 (1061)
T ss_pred HhHHHHHHHHHHHHcCCCccccCCcceEEEEeeccCccccccccccccccceecccchhhHHHHHHHHHhcCC--CCCcc
Confidence 347899999999999999988874 44443 3344322 2678899999997 48999
Q ss_pred ecCCCcchHHHHHHHHHHHHhcCCCCEEEEEEECCCCC--CCccCCCcccc------------ccccccccccEEEEEec
Q 011007 219 LSGMGCSAGLISIDLARDLLQVHPNSNAVVVSTEIITP--NYYQGNERAML------------LPNCLFRMGGAAILLSN 284 (496)
Q Consensus 219 l~g~gCsg~l~al~lA~~lL~~~~~~~aLVVs~E~~s~--~~~~~~dr~~l------------~~~~lfgDGAaA~lLs~ 284 (496)
+. .+||+.+.|+++|...|+.|..+.||+-+....-. .++....-.+| -..++.|.|+++++|-+
T Consensus 170 vd-taCSSsLvAvhlA~~sL~~Ge~d~alaGgv~l~~~p~~~~~~~~~g~ls~~g~c~~fd~~adG~v~geG~g~vvLKr 248 (1061)
T COG3321 170 VD-TACSSSLVAVHLACQSLRLGECDLALAGGVNLVLSPESSYLFSAGGMLSPDGRCKAFDADADGYVRGEGAGVVVLKR 248 (1061)
T ss_pred cc-chhhHHHHHHHHHHHHHHcCCCCEEEecceEeccCCcceeeeecccCcCCCCcceecccCCCCEEEeeeEEEEEEEE
Confidence 99 69999999999999999999988888766655421 11100000000 12468899999999986
Q ss_pred cC
Q 011007 285 RR 286 (496)
Q Consensus 285 ~~ 286 (496)
-.
T Consensus 249 l~ 250 (1061)
T COG3321 249 LS 250 (1061)
T ss_pred hH
Confidence 54
No 130
>PF08540 HMG_CoA_synt_C: Hydroxymethylglutaryl-coenzyme A synthase C terminal; InterPro: IPR013746 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase. Hydroxymethylglutaryl-CoA synthase (2.3.3.10 from EC) catalyses the condensation of acetyl-CoA with acetoacetyl-CoA to produce HMG-CoA and CoA, the second reaction in the mevalonate-dependent isoprenoid biosynthesis pathway. HMG-CoA synthase contains an important catalytic cysteine residue that acts as a nucleophile in the first step of the reaction: the acetylation of the enzyme by acetyl-CoA (its first substrate) to produce an acetyl-enzyme thioester, releasing the reduced coenzyme A. The subsequent nucleophilic attack on acetoacetyl-CoA (its second substrate) leads to the formation of HMG-CoA []. HMG-CoA synthase occurs in eukaryotes, archaea and certain bacteria []. In vertebrates, there are two isozymes located in different subcellular compartments: a cytosolic form that is the starting point of the mevalonate pathway (leads to cholesterol and other sterolic and isoprenoid compounds), and a mitochondrial form responsible for ketone body biosynthesis. HMG-CoA is also found in other eukaryotes such as insects, plants and fungi []. In bacteria, isoprenoid precursors are generally synthesised via an alternative, non-mevalonate pathway, however a number of Gram-positive pathogens utilise a mevalonate pathway involving HMG-CoA synthase that is parallel to that found in eukaryotes [, ]. This entry represents the C-terminal domain of HMG-CoA synthase enzymes from both eukaryotes and prokaryotes.; GO: 0004421 hydroxymethylglutaryl-CoA synthase activity, 0008299 isoprenoid biosynthetic process; PDB: 1TXT_D 1TVZ_A 1X9E_B 2HDB_B 3V4X_A 3V4N_C 2P8U_A 2FA0_A 2F9A_A 2F82_A ....
Probab=97.17 E-value=0.00033 Score=70.43 Aligned_cols=61 Identities=20% Similarity=0.289 Sum_probs=45.4
Q ss_pred hHhhhhhhhcccCCccCCchHHHHHHHH--HhCCCCCCCEEEEEeechhHhhhheeeEeeccC
Q 011007 411 HVEASRMTLHRFGNTSSSSLWYEMSYIE--EKGRMKKGDRVWQIAFGSGFKCNSAVWKCNKTI 471 (496)
Q Consensus 411 ~~~~S~~~l~r~GNtsSaSi~~~La~~~--~~g~i~~Gd~Vll~~fG~G~~~~sav~r~~~~~ 471 (496)
|++||...-.+.||+.++|++..|+-++ .++..-.|+||.|.++|||......-.+.....
T Consensus 143 kv~psl~~~~~vGN~YTaSly~~L~SlL~~~~~~~l~GkrI~~FSYGSG~~s~~fs~~v~~~~ 205 (282)
T PF08540_consen 143 KVEPSLLYSRQVGNMYTASLYLGLASLLSSAEADDLAGKRIGMFSYGSGLASEFFSGRVQPGA 205 (282)
T ss_dssp HCHHHTHHHHHHB--GGGHHHHHHHHHHHHHHSCHHTT-EEEEEEEETTTEEEEEEEEE-TTG
T ss_pred HHhHHHHHHHHcCceehHHHHHHHHHHhhccCccccCCCEEEEEEecCCcceeEEEEEEeCCc
Confidence 6677777778999999999999999988 444545799999999999977666666655433
No 131
>KOG1389 consensus 3-oxoacyl CoA thiolase [Lipid transport and metabolism]
Probab=97.16 E-value=0.011 Score=59.41 Aligned_cols=95 Identities=15% Similarity=0.200 Sum_probs=76.4
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHH-HHHcCCCCCceeeEecCCCcchHHHHHHHHHHHHhc
Q 011007 162 AELVIFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMV-INKYKLRSNIKSFNLSGMGCSAGLISIDLARDLLQV 240 (496)
Q Consensus 162 a~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I-~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL~~ 240 (496)
.-+|...+.+..+++++++|+.|+-+++.+...--.-...+++ +-.-|++..++..-++ --||+|+.|+.....-+++
T Consensus 61 pDeLl~~vl~a~ie~t~~dp~~igdi~vG~vL~pg~ga~e~R~a~~~ag~P~tvpv~tvN-RqCsSGLqaVadiA~~Ir~ 139 (435)
T KOG1389|consen 61 PDELLAAVLRAVIEKTNLDPSLIGDIVVGTVLAPGSGASECRMAAFYAGFPETVPVRTVN-RQCSSGLQAVADIAAKIRA 139 (435)
T ss_pred hHHHHHHHHHHHHhhcCCCHHHhcceeeeeccCCCcchHHHHHHHHHcCCCcccchhhhh-hhhhhHHHHHHHHHHHHhc
Confidence 4568889999999999999999999998865321111344444 4456888777777788 7999999999999999999
Q ss_pred CCCCEEEEEEECCCCCC
Q 011007 241 HPNSNAVVVSTEIITPN 257 (496)
Q Consensus 241 ~~~~~aLVVs~E~~s~~ 257 (496)
|.++--|-.+.|.+|.+
T Consensus 140 G~ydIGla~GvESMt~~ 156 (435)
T KOG1389|consen 140 GFYDIGLAAGVESMTTN 156 (435)
T ss_pred Cceeeecccchhhhccc
Confidence 99999999999999975
No 132
>KOG1406 consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44/SCP2 [Lipid transport and metabolism]
Probab=96.86 E-value=0.0016 Score=63.85 Aligned_cols=89 Identities=17% Similarity=0.250 Sum_probs=72.3
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCEEEeecc-CCCCCCcHHHHHHHHcCCCCCceeeEecCCCcchHHHHHHHHHHHHhcC
Q 011007 163 ELVIFSAMDSLLQKTGLKPKDIDILIVNCS-LFSPTPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLLQVH 241 (496)
Q Consensus 163 ~~la~~Aa~~aL~~agi~p~dID~LI~~ss-~~~~~Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL~~~ 241 (496)
.|++.+|+.++|++++++-++|+--++.-. .+. ....+-..++||. .++.||+++ .|+.+-.||-+|++++++|
T Consensus 30 pd~a~ea~tkal~da~ikys~vqqa~vgyvfgds---tcgqraiyevgmt-gipi~nvnn-ncatgssalflakqiiesg 104 (408)
T KOG1406|consen 30 PDFAKEAITKALQDAGIKYSEVQQAVVGYVFGDS---TCGQRAIYEVGMT-GIPIYNVNN-NCATGSSALFLAKQIIESG 104 (408)
T ss_pred chHHHHHHHHHHHhcCCCHHHHHhhhheeeecCC---ccchHHHHhcccc-CcceeeccC-ccccCchHHHHHHHHHhcC
Confidence 468999999999999999988875543311 111 1123445589998 799999995 9999999999999999999
Q ss_pred CCCEEEEEEECCCCC
Q 011007 242 PNSNAVVVSTEIITP 256 (496)
Q Consensus 242 ~~~~aLVVs~E~~s~ 256 (496)
..+.||..+-|.+++
T Consensus 105 n~dcvlalgfekm~~ 119 (408)
T KOG1406|consen 105 NSDCVLALGFEKMER 119 (408)
T ss_pred CcceEEeechhhhCC
Confidence 999999999999886
No 133
>KOG1391 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=95.56 E-value=0.024 Score=55.56 Aligned_cols=92 Identities=16% Similarity=0.120 Sum_probs=74.3
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEeec----cCCCCCCcHHHHHHHHcCCCCCceeeEecCCCcchHHHHHHHHHHH
Q 011007 162 AELVIFSAMDSLLQKTGLKPKDIDILIVNC----SLFSPTPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDL 237 (496)
Q Consensus 162 a~~la~~Aa~~aL~~agi~p~dID~LI~~s----s~~~~~Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~l 237 (496)
+.+|..-|++.+|+.+++.++.+|.+|+.. |.+-. -++..|--+-|.+.+.++..++ -=|.+++.++-.+.+-
T Consensus 28 aTdL~~~AakAAL~aa~v~~e~VD~VI~GNV~aSSsDgI--Yl~RHvGL~~GvP~e~pALtiN-RLCGSGFQsiVNgaQ~ 104 (396)
T KOG1391|consen 28 ATDLGVVAAKAALKAANVGAEAVDHVIMGNVLASSSDGI--YLARHVGLRVGVPKETPALTIN-RLCGSGFQSIVNGAQE 104 (396)
T ss_pred hhhHHHHHHHHHHhhcCCChhhcceEEEeeeeeccCCce--EeeeccccccCCcCccCceeeh-hhhcccHHHHHhhHHH
Confidence 678999999999999999999999999763 33311 1223333444556678899999 6999999999999999
Q ss_pred HhcCCCCEEEEEEECCCCC
Q 011007 238 LQVHPNSNAVVVSTEIITP 256 (496)
Q Consensus 238 L~~~~~~~aLVVs~E~~s~ 256 (496)
+..+..+-+|.=++|++|.
T Consensus 105 I~vgea~ivL~GGtEnMSq 123 (396)
T KOG1391|consen 105 ICVGEAEIVLCGGTENMSQ 123 (396)
T ss_pred hhcCcceEEEecCcccccc
Confidence 9999889999999999996
No 134
>PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2.3.1.41 from EC, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008610 lipid biosynthetic process; PDB: 3IL3_A 1ZOW_C 3GWE_B 3GWA_B 1UB7_B 3LED_B 2EBD_A 1HNJ_A 2EFT_B 1HN9_B ....
Probab=95.51 E-value=0.018 Score=47.53 Aligned_cols=75 Identities=17% Similarity=0.274 Sum_probs=47.1
Q ss_pred HHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCCceee---EecCCCcchHHHHHHHHHHHHhcCCCCEEEEEE
Q 011007 174 LQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSNIKSF---NLSGMGCSAGLISIDLARDLLQVHPNSNAVVVS 250 (496)
Q Consensus 174 L~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~~~~~---dl~g~gCsg~l~al~lA~~lL~~~~~~~aLVVs 250 (496)
|+++|++++|||.+|... ........+.+++|++++.... +.++++|++...+|..+..-=+..+++++|+++
T Consensus 1 L~~~g~~~~did~~i~hq----~~~~~~~~~~~~lgi~~~~~~~~~~~~Gn~~sa~~~~~L~~~~~~g~~~~Gd~vl~~~ 76 (90)
T PF08541_consen 1 LERAGLSPDDIDHFIPHQ----ASKKILDSIAKRLGIPPERFPDNLAEYGNTGSASIPINLADALEEGRIKPGDRVLLVG 76 (90)
T ss_dssp HHHTT--GGGESEEEE-S----SSHHHHHHHHHHHTS-GGGBE-THHHH-B-GGGHHHHHHHHHHHTTSSCTTEEEEEEE
T ss_pred CccccCCHHHCCEEEeCC----CCHHHHHHHHHHcCCcHHHHHHHHhccCcchhhhHHHHHHHHHHcCCCCCCCEEEEEE
Confidence 689999999999999663 2344556699999998653333 345567777777776655522234678888887
Q ss_pred EC
Q 011007 251 TE 252 (496)
Q Consensus 251 ~E 252 (496)
.-
T Consensus 77 ~G 78 (90)
T PF08541_consen 77 FG 78 (90)
T ss_dssp EE
T ss_pred EE
Confidence 64
No 135
>KOG1394 consensus 3-oxoacyl-(acyl-carrier-protein) synthase (I and II) [Lipid transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=95.47 E-value=0.16 Score=52.26 Aligned_cols=119 Identities=18% Similarity=0.285 Sum_probs=83.8
Q ss_pred hHHHHHHHHHHHHHHHcCCCcC---CcC-----EEEeeccC----------------------CCCCC----cH-HHHHH
Q 011007 161 EAELVIFSAMDSLLQKTGLKPK---DID-----ILIVNCSL----------------------FSPTP----SL-SAMVI 205 (496)
Q Consensus 161 ea~~la~~Aa~~aL~~agi~p~---dID-----~LI~~ss~----------------------~~~~P----s~-a~~I~ 205 (496)
....++..|++++|+++++.+. +.| ++| .+.. ++..| .+ +.+|.
T Consensus 93 ~~~~~al~aa~eAL~da~~~~~~~~e~dk~~~GV~i-Gtgmg~l~~i~e~a~~~~~~g~rrvsPffVPkil~NM~ag~vs 171 (440)
T KOG1394|consen 93 KFTKLALTAAEEALKDAGLLDVNLSEEDKEKTGVLI-GTGMGDLEDIYETAQNLSEKGYRRVSPFFVPKILTNMAAGYVS 171 (440)
T ss_pred HHHHHHHHHHHHHHHhcCCCCcccchhhhhhhceEe-ccccccHHHHHHHHHHHHHhcccccCccccchhhcccccchhh
Confidence 3678999999999999997765 222 222 1111 11233 22 56899
Q ss_pred HHcCCCCCceeeEecCCCcchHHHHHHHHHHHHhcCCCCEEEEEEECCCCCC-----C-------c---cC--------C
Q 011007 206 NKYKLRSNIKSFNLSGMGCSAGLISIDLARDLLQVHPNSNAVVVSTEIITPN-----Y-------Y---QG--------N 262 (496)
Q Consensus 206 ~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL~~~~~~~aLVVs~E~~s~~-----~-------~---~~--------~ 262 (496)
-+||++ -+.+.++ .+|+.+..+|.-|.++++.|..+..|.=++|..-.. | . ++ .
T Consensus 172 m~~gl~--GpnhsvS-TACATg~h~igda~n~Ir~GdaDvmlAGgsE~~I~PlslaGF~r~RALSt~nd~P~~aSRPfD~ 248 (440)
T KOG1394|consen 172 MKYGLR--GPNHSVS-TACATGNHCIGDAFNFIRLGDADVMLAGGSEACINPLSLAGFSRARALSTRNDNPQKASRPFDK 248 (440)
T ss_pred hhhcCc--CCchhhH-hhhhhccchHHHHHHHHHhCccceeeccCcceeecchhhhhHHHHHHhhhcCCCccccCCCCcc
Confidence 999997 4788899 699999999999999999998777777777753210 0 0 01 1
Q ss_pred CccccccccccccccEEEEEeccCC
Q 011007 263 ERAMLLPNCLFRMGGAAILLSNRRR 287 (496)
Q Consensus 263 dr~~l~~~~lfgDGAaA~lLs~~~~ 287 (496)
+|+ .+++|.|++.++|+.-+.
T Consensus 249 ~Rd----GFVmGEGagvlvlEelEH 269 (440)
T KOG1394|consen 249 KRD----GFVMGEGAGVLVLEELEH 269 (440)
T ss_pred CCC----ceeeccceeEEehHhHHH
Confidence 233 578999999999987553
No 136
>PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=94.38 E-value=0.22 Score=52.29 Aligned_cols=88 Identities=14% Similarity=0.209 Sum_probs=61.6
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHc-----CCCCCce---eeEecCCCcchHHHHHHH
Q 011007 162 AELVIFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKY-----KLRSNIK---SFNLSGMGCSAGLISIDL 233 (496)
Q Consensus 162 a~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~L-----gl~~~~~---~~dl~g~gCsg~l~al~l 233 (496)
+.+....+++++|+++|++++|||.++... ..+.+-..+.++| |++++-. --++++++|++...+|..
T Consensus 270 ~~~~~~~~i~~~L~~~gl~~~DId~~v~Hq----~n~~~~~~v~~~l~~~~~gl~~~k~~~~~~~~GNt~sAsipi~L~~ 345 (378)
T PRK06816 270 IVVYTIKPLLELVDKRNLDPDDIDYFLPHY----SSEYFREKIVELLAKAGFMIPEEKWFTNLATVGNTGSASIYIMLDE 345 (378)
T ss_pred hHHHHHHHHHHHHHHcCCChhhCCEEeeCc----ccHHHHHHHHHHHHhccCCCChhheEEeccccccccchHHHHHHHH
Confidence 445668889999999999999999998543 2344556777776 7864321 226677888888888876
Q ss_pred HHHHHhcCCCCEEEEEEECC
Q 011007 234 ARDLLQVHPNSNAVVVSTEI 253 (496)
Q Consensus 234 A~~lL~~~~~~~aLVVs~E~ 253 (496)
|..-=+-.+++++++++.|.
T Consensus 346 a~~~g~~~~Gd~vl~~~~~s 365 (378)
T PRK06816 346 LLNSGRLKPGQKILCFVPES 365 (378)
T ss_pred HHHcCCCCCCCEEEEEEecc
Confidence 63311123568898888775
No 137
>TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative. Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound.
Probab=94.32 E-value=0.16 Score=52.67 Aligned_cols=83 Identities=17% Similarity=0.253 Sum_probs=56.8
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCCcee-----eEecCCCcchHHHHHHHHHH
Q 011007 162 AELVIFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSNIKS-----FNLSGMGCSAGLISIDLARD 236 (496)
Q Consensus 162 a~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~~~~-----~dl~g~gCsg~l~al~lA~~ 236 (496)
....+..+++++|+++|++++|||.+++.. +.+.+-..+.++||++++-.. -+++++++++...+|.-+..
T Consensus 206 ~~~~~~~~~~~~L~~~gl~~~did~~i~Hq----~~~~~~~~~~~~lgl~~ek~~~~~~~~~~GNt~sAsipl~L~~~~~ 281 (345)
T TIGR00748 206 YFHHVVTAAKGLMEKLGLTPEDFDYAVFHQ----PNGKFYLVAARMLGFPKEQVKPGLLTPRIGNTYSGATPVGLSAVLD 281 (345)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHcCEEEeCC----CChHHHHHHHHHcCCCHHHeeccccccccCchhhhHHHHHHHHHHH
Confidence 344456889999999999999999998653 233455668999999753222 26778889988888876644
Q ss_pred HHhcCCCCEEEEEE
Q 011007 237 LLQVHPNSNAVVVS 250 (496)
Q Consensus 237 lL~~~~~~~aLVVs 250 (496)
- ..+++++|+++
T Consensus 282 ~--~~~Gd~vll~~ 293 (345)
T TIGR00748 282 I--AEPGDRILAVS 293 (345)
T ss_pred h--cCCCCEEEEEE
Confidence 2 22344554443
No 138
>PRK06025 acetyl-CoA acetyltransferase; Provisional
Probab=93.87 E-value=0.21 Score=53.28 Aligned_cols=91 Identities=20% Similarity=0.300 Sum_probs=63.8
Q ss_pred HHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCCceeeEecCC--------CcchHHHHHHHHHHHH
Q 011007 167 FSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSNIKSFNLSGM--------GCSAGLISIDLARDLL 238 (496)
Q Consensus 167 ~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~~~~~dl~g~--------gCsg~l~al~lA~~lL 238 (496)
..|++++|+++|++++|||.+.++- ......-...+++|++. ..+|.+|- |++|....+.+...|.
T Consensus 318 ~~Ai~~aL~~AGl~~~DID~~ei~e----aFa~~~l~~~~~lg~~~--~~vN~~GG~ia~GHp~GaTGa~~v~~ll~qL~ 391 (417)
T PRK06025 318 VPAAKKVLAKAGLTKDDIDLWEINE----AFAVVAEKFIRDLDLDR--DKVNVNGGAIALGHPIGATGSILIGTVLDELE 391 (417)
T ss_pred HHHHHHHHHHcCCCHHHCcEEEEch----HHHHHHHHHHHHcCCCh--hhccccCCHHhcCCchhHHHHHHHHHHHHHHH
Confidence 4799999999999999999997552 11234456778899864 45667763 6777777788888886
Q ss_pred hcCCCCEEEEEEECCCCCCCccCCCccccccccccccccEEEEEec
Q 011007 239 QVHPNSNAVVVSTEIITPNYYQGNERAMLLPNCLFRMGGAAILLSN 284 (496)
Q Consensus 239 ~~~~~~~aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAaA~lLs~ 284 (496)
+.+ .++.| ++.|..|-.++|+||++
T Consensus 392 ~~g-~~~Gl--------------------~~~c~~GG~g~A~lle~ 416 (417)
T PRK06025 392 RRG-LKRGL--------------------VTMCAAGGMAPAIIIER 416 (417)
T ss_pred HhC-CCeEE--------------------EEEEeeccceeEEEEEe
Confidence 644 34442 23456676678888875
No 139
>PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=93.65 E-value=0.19 Score=51.36 Aligned_cols=89 Identities=13% Similarity=0.144 Sum_probs=58.8
Q ss_pred HHhHHHHHHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCCcee---eEecCCCcchHHHHHHHHH
Q 011007 159 RGEAELVIFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSNIKS---FNLSGMGCSAGLISIDLAR 235 (496)
Q Consensus 159 ~~ea~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~~~~---~dl~g~gCsg~l~al~lA~ 235 (496)
.+++.+...++++++|+++|++++|||.+++.. ..+.+-..+.++||++++-.. -+.+++++++...+|+.+.
T Consensus 222 ~~~~~~~~~~~~~~~L~~~gl~~~did~~~~h~----~~~~~~~~~~~~l~l~~~k~~~~l~~~Gn~~sas~~~~L~~~~ 297 (326)
T PRK05963 222 FTEAVRMMSGASQNVLASAAMTPQDIDRFFPHQ----ANARIVDKVCETIGIPRAKAASTLETYGNSSAATIPLSLSLAN 297 (326)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHCCEEEeCC----CCHHHHHHHHHHcCCCHHHhhhhHHhhCcHHHHHHHHHHHHHH
Confidence 345666778889999999999999999988642 235566778999999854322 2344556666666665432
Q ss_pred HHHhcCCCCEEEEEEE
Q 011007 236 DLLQVHPNSNAVVVST 251 (496)
Q Consensus 236 ~lL~~~~~~~aLVVs~ 251 (496)
.-=+..+++++|+++.
T Consensus 298 ~~~~~~~Gd~vll~~~ 313 (326)
T PRK05963 298 LEQPLREGERLLFAAA 313 (326)
T ss_pred HhCCCCCCCEEEEEEE
Confidence 2101124577777775
No 140
>KOG1392 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=93.53 E-value=0.074 Score=52.94 Aligned_cols=94 Identities=15% Similarity=0.223 Sum_probs=79.7
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEeeccC-CCCCCcHHHHHHHHcCCCCCceeeEecCCCcchHHHHHHHHHHHHhc
Q 011007 162 AELVIFSAMDSLLQKTGLKPKDIDILIVNCSL-FSPTPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLLQV 240 (496)
Q Consensus 162 a~~la~~Aa~~aL~~agi~p~dID~LI~~ss~-~~~~Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL~~ 240 (496)
+.+++.+|...+|+++.++.+.||.+|+.+.. ..-+..+|..-+-.-|.+..+++..+. |+|-+.-.|+-..-.|+.+
T Consensus 66 phdlar~al~~ll~kt~lpke~~dyii~gtviqevktsniareaal~agfsdktpahtvt-macissn~amttgmgliat 144 (465)
T KOG1392|consen 66 PHDLAREALKALLEKTKLPKEQLDYIICGTVIQEVKTSNIAREAALLAGFSDKTPAHTVT-MACISSNVAMTTGMGLIAT 144 (465)
T ss_pred hhHHHHHHHHHHHHhccCCHHHhceeeehhhHHHHhcchHHHHHHHhcCCCCCCccceee-eehhccchhhhccceeEee
Confidence 67899999999999999999999999998853 455666666666667888788999999 9999999999999999999
Q ss_pred CCCCEEEEEEECCCCC
Q 011007 241 HPNSNAVVVSTEIITP 256 (496)
Q Consensus 241 ~~~~~aLVVs~E~~s~ 256 (496)
+.++.++.-+.|.+|.
T Consensus 145 g~~dvivaggvelmsd 160 (465)
T KOG1392|consen 145 GNADVIVAGGVELMSD 160 (465)
T ss_pred CCcCEEEEcceeeccc
Confidence 9877777777788875
No 141
>PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=93.45 E-value=0.3 Score=50.14 Aligned_cols=88 Identities=13% Similarity=0.186 Sum_probs=60.1
Q ss_pred HHhHHHHHHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCCceee---EecCCCcchHHHHHHHHH
Q 011007 159 RGEAELVIFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSNIKSF---NLSGMGCSAGLISIDLAR 235 (496)
Q Consensus 159 ~~ea~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~~~~~---dl~g~gCsg~l~al~lA~ 235 (496)
.++.......+.+++|+++|++++|||.+++.. ..+..-..+.++||++++-... ..+++++++...+|+.+
T Consensus 234 ~~~~~~~~~~~~~~~L~~~g~~~~did~~i~H~----~~~~~~~~~~~~lgl~~~k~~~~~~~~GN~~sas~~~~L~~~- 308 (338)
T PRK09258 234 LKEGVELAVDTWEAFLAQLGWAVEQVDRVICHQ----VGAAHTRAILKALGIDPEKVFTTFPTLGNMGPASLPITLAMA- 308 (338)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHCCEEecCC----CCHHHHHHHHHHhCCCHHHceehHhhhCCcHHhHHHHHHHHH-
Confidence 344556677789999999999999999988653 2334566899999998533222 25666666666666554
Q ss_pred HHHhcC---CCCEEEEEEECC
Q 011007 236 DLLQVH---PNSNAVVVSTEI 253 (496)
Q Consensus 236 ~lL~~~---~~~~aLVVs~E~ 253 (496)
++.+ +++++|+++...
T Consensus 309 --~~~g~~~~Gd~vll~~~G~ 327 (338)
T PRK09258 309 --AEEGFLKPGDRVALLGIGS 327 (338)
T ss_pred --HHhCCCCCCCEEEEEEech
Confidence 3332 467888777543
No 142
>PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=92.97 E-value=0.29 Score=50.13 Aligned_cols=83 Identities=11% Similarity=0.153 Sum_probs=55.2
Q ss_pred hHHHHHHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCCcee---eEecCCCcchHHHHHHHHHHH
Q 011007 161 EAELVIFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSNIKS---FNLSGMGCSAGLISIDLARDL 237 (496)
Q Consensus 161 ea~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~~~~---~dl~g~gCsg~l~al~lA~~l 237 (496)
.+......+++++|+++|++++|||.+++... .......++++||++++... -+.++++|++...+|+. +
T Consensus 227 ~~~~~~~~~i~~~L~~~gl~~~did~~~~H~~----~~~~~~~i~~~l~l~~e~~~~~~~~~Gn~~sas~~~~L~~---~ 299 (329)
T PRK07204 227 LSSKYLMKFIDKLLMDAGYTLADIDLIVPHQA----SGPAMRLIRKKLGVDEERFVTIFEDHGNMIAASIPVALFE---A 299 (329)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEeCCC----CHHHHHHHHHHcCCCHHHhhhhHhhhCcHHHHHHHHHHHH---H
Confidence 35556678899999999999999999986532 12345689999999854333 23444555555555553 3
Q ss_pred HhcC---CCCEEEEEE
Q 011007 238 LQVH---PNSNAVVVS 250 (496)
Q Consensus 238 L~~~---~~~~aLVVs 250 (496)
++.+ +++++|+++
T Consensus 300 ~~~g~~~~Gd~vll~~ 315 (329)
T PRK07204 300 IKQKKVQRGNKILLLG 315 (329)
T ss_pred HHcCCCCCCCEEEEEE
Confidence 4443 456777665
No 143
>PF13723 Ketoacyl-synt_2: Beta-ketoacyl synthase, N-terminal domain
Probab=92.62 E-value=2.2 Score=41.45 Aligned_cols=114 Identities=17% Similarity=0.040 Sum_probs=75.8
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEeeccCC----------------CCCCc-HHHHHHH--------HcCCCCCcee
Q 011007 162 AELVIFSAMDSLLQKTGLKPKDIDILIVNCSLF----------------SPTPS-LSAMVIN--------KYKLRSNIKS 216 (496)
Q Consensus 162 a~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~----------------~~~Ps-~a~~I~~--------~Lgl~~~~~~ 216 (496)
...|++.++.+++++. +++|.+|++|..+ ...|. ++.-|+| ..|. ....
T Consensus 34 ~~rla~~~a~~~~~~~----~~~d~~VfaS~~Gel~~t~~ll~~l~~~~~lSPT~Fs~SVHNA~aG~~sI~~~~--~~~~ 107 (218)
T PF13723_consen 34 LSRLALEAALECLAED----EQPDAIVFASRHGELERTFKLLEALAEEEELSPTAFSQSVHNAAAGYWSIATKN--TGPN 107 (218)
T ss_pred HHHHHHHHHHHHHhcc----CCCCcEEEEeCCCcHHHHHHHHHHHHhCCCcCccchhhhhhhHHHHHHHHHhCC--CCce
Confidence 5678888888888653 5788899887532 13441 2222322 2333 3567
Q ss_pred eEecCCCcchHHHHHHHHHHHHhcCCCCEEEEEEECCCCCCCccCCCccccccccccccccEEEEEeccCC
Q 011007 217 FNLSGMGCSAGLISIDLARDLLQVHPNSNAVVVSTEIITPNYYQGNERAMLLPNCLFRMGGAAILLSNRRR 287 (496)
Q Consensus 217 ~dl~g~gCsg~l~al~lA~~lL~~~~~~~aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAaA~lLs~~~~ 287 (496)
..|. .|=.++-.||.-|..+|+.+ .+.||||+.|-.....|...... .....--|.|++|+++..
T Consensus 108 tal~-a~~~sf~~aLleA~~~l~~~-~~~VLlv~~De~~p~~y~~~~~~----~~~~~~~A~al~L~~~~~ 172 (218)
T PF13723_consen 108 TALA-AGEDSFEAALLEAAAQLAEG-AEPVLLVCYDEPLPEPYQEFRPE----RDPPFPYALALVLSPGDS 172 (218)
T ss_pred EEEe-cCcchHHHHHHHHHHHHHcC-CCCEEEEEeCCCCChhhhhcccc----cCCCcCEEEEEEecCCCC
Confidence 7888 48889999999999999999 89999999999776444432111 112234577888886554
No 144
>TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III. Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment.
Probab=92.61 E-value=0.4 Score=48.73 Aligned_cols=84 Identities=15% Similarity=0.224 Sum_probs=56.2
Q ss_pred hHHHHHHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCCceee---EecCCCcchHHHHHHHHHHH
Q 011007 161 EAELVIFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSNIKSF---NLSGMGCSAGLISIDLARDL 237 (496)
Q Consensus 161 ea~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~~~~~---dl~g~gCsg~l~al~lA~~l 237 (496)
+..+...++++++|+++|++++|||.+++.. +.+..-..++++||++.+-... .+++++|++.+.+|.-+
T Consensus 216 ~~~~~~~~~~~~~l~~~g~~~~di~~~~~h~----~~~~~~~~~~~~lgi~~~k~~~~~~~~Gn~~sas~~~~L~~~--- 288 (318)
T TIGR00747 216 HAVRKMGDVVEETLEANGLDPEDIDWFVPHQ----ANLRIIEALAKRLELDMSQVVKTVHKYGNTSAASIPLALDEL--- 288 (318)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEECC----CCHHHHHHHHHHcCCCHHHeeehHhhhCCHHHHHHHHHHHHH---
Confidence 3455567789999999999999999998542 2345667899999998532222 23445666666666443
Q ss_pred HhcC---CCCEEEEEEE
Q 011007 238 LQVH---PNSNAVVVST 251 (496)
Q Consensus 238 L~~~---~~~~aLVVs~ 251 (496)
++.+ +++++|+++.
T Consensus 289 ~~~~~~~~Gd~vll~~~ 305 (318)
T TIGR00747 289 LRTGRIKPGDLLLLVAF 305 (318)
T ss_pred HHcCCCCCCCEEEEEEE
Confidence 3333 3567776664
No 145
>cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction. Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units).
Probab=92.51 E-value=0.55 Score=47.77 Aligned_cols=78 Identities=15% Similarity=0.107 Sum_probs=51.6
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEeec-cCCCCCCcHHHHHHHHcCCC---CCceeeEecCCCcchHHHHHHHHHHHHh
Q 011007 164 LVIFSAMDSLLQKTGLKPKDIDILIVNC-SLFSPTPSLSAMVINKYKLR---SNIKSFNLSGMGCSAGLISIDLARDLLQ 239 (496)
Q Consensus 164 ~la~~Aa~~aL~~agi~p~dID~LI~~s-s~~~~~Ps~a~~I~~~Lgl~---~~~~~~dl~g~gCsg~l~al~lA~~lL~ 239 (496)
+....+++++|+++|++++|||.++... +......-........++.+ .....-+++++++++++..|..+...++
T Consensus 205 ~~~~~~i~~al~~agl~~~did~~~~h~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~G~~~aas~~~~l~~~~~~~~ 284 (332)
T cd00825 205 EGLARAAKEALAVAGLTVWDIDYLVAHGTGTPIGDVKELKLLRSEFGDKSPAVSATKAMTGNLSSAAVVLAVDEAVLMLE 284 (332)
T ss_pred HHHHHHHHHHHHHcCCCHhHCCEEEccCCCCCCCCHHHHHHHHHHhCCCCceeECCCcccccchhHhHHHHHHHHHHHHh
Confidence 3456789999999999999999998764 33333333334444455532 1112336677788888888888877666
Q ss_pred cC
Q 011007 240 VH 241 (496)
Q Consensus 240 ~~ 241 (496)
.+
T Consensus 285 ~~ 286 (332)
T cd00825 285 HG 286 (332)
T ss_pred cC
Confidence 54
No 146
>PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=92.24 E-value=0.63 Score=47.44 Aligned_cols=84 Identities=15% Similarity=0.145 Sum_probs=57.0
Q ss_pred hHHHHHHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCCcee---eEecCCCcchHHHHHHHHHHH
Q 011007 161 EAELVIFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSNIKS---FNLSGMGCSAGLISIDLARDL 237 (496)
Q Consensus 161 ea~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~~~~---~dl~g~gCsg~l~al~lA~~l 237 (496)
++......+++++|+++|++++|||.+++.. +.+.+...+.++||++.+-.. -++++++|++...+|. .+
T Consensus 222 ~~~~~~~~~i~~~L~~~g~~~~did~~~~h~----~~~~~~~~~~~~lg~~~~~~~~~~~~~Gn~~sas~~~~L~---~~ 294 (325)
T PRK12879 222 WAVRTMPKGARQVLEKAGLTKDDIDWVIPHQ----ANLRIIESLCEKLGIPMEKTLVSVEYYGNTSAATIPLALD---LA 294 (325)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEECC----CCHHHHHHHHHHcCCCHHHhhhhHhhhCchHHHHHHHHHH---HH
Confidence 3445566788999999999999999998653 335566789999999753222 2445556666666664 33
Q ss_pred HhcC---CCCEEEEEEE
Q 011007 238 LQVH---PNSNAVVVST 251 (496)
Q Consensus 238 L~~~---~~~~aLVVs~ 251 (496)
++.+ +++++|+++.
T Consensus 295 ~~~g~~~~Gd~vll~~~ 311 (325)
T PRK12879 295 LEQGKIKPGDTLLLYGF 311 (325)
T ss_pred HHcCCCCCCCEEEEEEE
Confidence 5543 3567776664
No 147
>PRK04262 hypothetical protein; Provisional
Probab=91.56 E-value=0.45 Score=49.36 Aligned_cols=68 Identities=21% Similarity=0.271 Sum_probs=49.0
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCCcee-----eEecCCCcchHHHHHHHHH
Q 011007 164 LVIFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSNIKS-----FNLSGMGCSAGLISIDLAR 235 (496)
Q Consensus 164 ~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~~~~-----~dl~g~gCsg~l~al~lA~ 235 (496)
.....+++++|+++|++++|||.+++.. ..+.+-..++++||++.+-.. -+.+++++++...+|.-+.
T Consensus 209 ~~~~~~i~~~L~~~gl~~~dId~~v~Hq----~n~~~~~~~~~~Lgl~~ek~~~~~~~~~~GNt~sAsi~~~L~~~~ 281 (347)
T PRK04262 209 KHIISAAKGLMEKLGLKPSDYDYAVFHQ----PNGKFPLRVAKMLGFTKEQVKPGLLTPYIGNTYSGSALLGLAAVL 281 (347)
T ss_pred HHHHHHHHHHHHHhCcCHHHhceeecCC----CchHHHHHHHHHcCCCHHHhhccchhhhhCChHHHHHHHHHHHHH
Confidence 3566789999999999999999988652 234455678999999754222 2566677777777776554
No 148
>PRK06840 hypothetical protein; Validated
Probab=91.55 E-value=0.63 Score=47.91 Aligned_cols=81 Identities=23% Similarity=0.290 Sum_probs=53.8
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCCce--eeEecCCCcchHHHHHHHHHHHHhcC
Q 011007 164 LVIFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSNIK--SFNLSGMGCSAGLISIDLARDLLQVH 241 (496)
Q Consensus 164 ~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~~~--~~dl~g~gCsg~l~al~lA~~lL~~~ 241 (496)
....++++++|+++|++++|||.++... ..+..-..++++||++++-. --+..+++|++.+.+|..+ ++++
T Consensus 237 ~~~~~~i~~~L~~~gl~~~did~~~~h~----~~~~~~~~~~~~Lgl~~~~~~~~~~~Gn~~sas~~~~L~~~---~~~~ 309 (339)
T PRK06840 237 PNFLKVIREALRKSGYTPKDIDYLAILH----MKRSAHIALLEGLGLTEEQAIYLDEYGHLGQLDQILSLHLA---LEQG 309 (339)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEECC----cCHHHHHHHHHHcCCCHHHeEeHHhccchhhhhHHHHHHHH---HHcC
Confidence 3456899999999999999999987532 22444567899999984321 1145556666666666533 4443
Q ss_pred ---CCCEEEEEEE
Q 011007 242 ---PNSNAVVVST 251 (496)
Q Consensus 242 ---~~~~aLVVs~ 251 (496)
+++++|+++.
T Consensus 310 ~~~~Gd~ill~~~ 322 (339)
T PRK06840 310 KLKDGDLVVLVSA 322 (339)
T ss_pred CCCCCCEEEEEEE
Confidence 4566666654
No 149
>PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III
Probab=91.42 E-value=0.56 Score=49.33 Aligned_cols=84 Identities=17% Similarity=0.188 Sum_probs=57.0
Q ss_pred hHHHHHHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCCcee---eEecCCCcchHHHHHHHHHHH
Q 011007 161 EAELVIFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSNIKS---FNLSGMGCSAGLISIDLARDL 237 (496)
Q Consensus 161 ea~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~~~~---~dl~g~gCsg~l~al~lA~~l 237 (496)
.+....-.+++++|+++|++++|||.++.... .+.+-..++++||++++-.. -+.+++++++...+|+-+
T Consensus 277 ~~~~~~~~~i~~~L~~~gl~~~dId~~v~Hq~----n~~~~~~~~~~Lgl~~ek~~~~l~~~GNt~sAsi~~~L~~~--- 349 (379)
T PLN02326 277 FAVRCVPQVIESALQKAGLTAESIDWLLLHQA----NQRIIDAVAQRLGIPPEKVISNLANYGNTSAASIPLALDEA--- 349 (379)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEECCC----CHHHHHHHHHHcCCCHHHeeecHhhcCcHHHHHHHHHHHHH---
Confidence 34455667889999999999999999886532 33445669999999854322 255666777777777544
Q ss_pred HhcC---CCCEEEEEEE
Q 011007 238 LQVH---PNSNAVVVST 251 (496)
Q Consensus 238 L~~~---~~~~aLVVs~ 251 (496)
++.+ +++++|+++.
T Consensus 350 ~~~g~~~~Gd~vll~~~ 366 (379)
T PLN02326 350 VRSGKVKKGDVIATAGF 366 (379)
T ss_pred HHcCCCCCCCEEEEEEE
Confidence 3333 4566766653
No 150
>cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems. It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA.
Probab=91.13 E-value=0.8 Score=46.41 Aligned_cols=85 Identities=16% Similarity=0.229 Sum_probs=58.0
Q ss_pred HhHHHHHHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCCceeeE---ecCCCcchHHHHHHHHHH
Q 011007 160 GEAELVIFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSNIKSFN---LSGMGCSAGLISIDLARD 236 (496)
Q Consensus 160 ~ea~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~~~~~d---l~g~gCsg~l~al~lA~~ 236 (496)
+...+...++++++|+++|++++|||.+++.. +.+..-..+.+++|++++-...+ .+++++++.+.+|.-+
T Consensus 219 ~~~~~~~~~~i~~~l~~~g~~~~di~~~~~h~----~~~~~~~~~~~~lgl~~~~~~~~~~~~Gn~~sas~~~~L~~~-- 292 (320)
T cd00830 219 KFAVRLMPESIEEALEKAGLTPDDIDWFVPHQ----ANLRIIEAVAKRLGLPEEKVVVNLDRYGNTSAASIPLALDEA-- 292 (320)
T ss_pred HHHHHhhHHHHHHHHHHcCCCHHHCCEEEECC----CCHHHHHHHHHHhCCCHHHhhhhHHhhCcHHHHHHHHHHHHH--
Confidence 34566678899999999999999999988653 23455667899999974432222 3445566666666444
Q ss_pred HHhcC---CCCEEEEEEE
Q 011007 237 LLQVH---PNSNAVVVST 251 (496)
Q Consensus 237 lL~~~---~~~~aLVVs~ 251 (496)
++.+ +++++|+++.
T Consensus 293 -~~~~~~~~G~~vll~~~ 309 (320)
T cd00830 293 -IEEGKLKKGDLVLLLGF 309 (320)
T ss_pred -HHcCCCCCCCEEEEEEE
Confidence 3443 5678888775
No 151
>CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional
Probab=90.36 E-value=1.1 Score=45.84 Aligned_cols=81 Identities=11% Similarity=0.177 Sum_probs=55.0
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCCceee---EecCCCcchHHHHHHHHHHHHhc
Q 011007 164 LVIFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSNIKSF---NLSGMGCSAGLISIDLARDLLQV 240 (496)
Q Consensus 164 ~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~~~~~---dl~g~gCsg~l~al~lA~~lL~~ 240 (496)
...-.+++++|+++|++++|||.+++... .+.....+.++||++++-... +.++++|++...+|.-+ ++.
T Consensus 226 ~~~~~~i~~~L~~~g~~~~did~~~~hq~----~~~~~~~~~~~lgl~~~k~~~~l~~~Gn~~sasi~~~L~~~---~~~ 298 (326)
T CHL00203 226 FQVPAVIIKCLNALNISIDEVDWFILHQA----NKRILEAIANRLSVPNSKMITNLEKYGNTSAASIPLALDEA---IQN 298 (326)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEECCC----CHHHHHHHHHHhCCCHHHhhhHHHhhCcHHHHHHHHHHHHH---HHh
Confidence 44666789999999999999999986532 244566799999998542222 34556666666666544 343
Q ss_pred C---CCCEEEEEEE
Q 011007 241 H---PNSNAVVVST 251 (496)
Q Consensus 241 ~---~~~~aLVVs~ 251 (496)
+ +++++|+++.
T Consensus 299 g~~~~Gd~vll~~~ 312 (326)
T CHL00203 299 NKIQPGQIIVLSGF 312 (326)
T ss_pred CCCCCCCEEEEEEE
Confidence 3 4567776664
No 152
>PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=90.35 E-value=0.95 Score=47.37 Aligned_cols=86 Identities=14% Similarity=0.159 Sum_probs=57.0
Q ss_pred HhHHHHHHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHH-cCCCC-Cce----eeEecCCCcchHHHHHHH
Q 011007 160 GEAELVIFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINK-YKLRS-NIK----SFNLSGMGCSAGLISIDL 233 (496)
Q Consensus 160 ~ea~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~-Lgl~~-~~~----~~dl~g~gCsg~l~al~l 233 (496)
+++.+.+..+++++|+++|++++|||.++..... +.+-..+.++ ||+.. .-. --..++++|++...+|+.
T Consensus 267 ~~~~~~~~~~i~~~L~~~gl~~~dId~~~~Hq~~----~~~~d~~~~~llg~~~~~~~~~~~~~~~GNt~sasi~~~L~~ 342 (372)
T PRK07515 267 KEVCPMVAEHIVEHLAENGLTPADVKRFWLHQAN----INMNQLIGKKVLGRDATPEEAPVILDEYANTSSAGSIIAFHK 342 (372)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEECCCC----HHHHHHHHHHhccCCCChhhceEeHHhcCCchhhHHHHHHHH
Confidence 4567778899999999999999999999865321 1222335566 56432 111 235677888888888877
Q ss_pred HHHHHhcCCCCEEEEEEE
Q 011007 234 ARDLLQVHPNSNAVVVST 251 (496)
Q Consensus 234 A~~lL~~~~~~~aLVVs~ 251 (496)
+..-+ .+++++|+++.
T Consensus 343 ~~~~~--~~Gd~vll~~~ 358 (372)
T PRK07515 343 HSDDL--AAGDLGVICSF 358 (372)
T ss_pred HhccC--CCCCEEEEEEe
Confidence 64422 34567777664
No 153
>cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction. Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products.
Probab=90.30 E-value=1.3 Score=43.01 Aligned_cols=78 Identities=19% Similarity=0.115 Sum_probs=46.0
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEee-ccCCCCCCcHHHHHHHHcCCC---CCceeeEecCCCcchHHHHHHHHHHHHh
Q 011007 164 LVIFSAMDSLLQKTGLKPKDIDILIVN-CSLFSPTPSLSAMVINKYKLR---SNIKSFNLSGMGCSAGLISIDLARDLLQ 239 (496)
Q Consensus 164 ~la~~Aa~~aL~~agi~p~dID~LI~~-ss~~~~~Ps~a~~I~~~Lgl~---~~~~~~dl~g~gCsg~l~al~lA~~lL~ 239 (496)
....++++++|+++|++++|||.++.. +.+...............+.. .....-.+.++++++++..+..+..-++
T Consensus 145 ~~~~~~i~~~l~~ag~~~~did~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~as~~~~l~~~~~~~~ 224 (254)
T cd00327 145 EGLARAARKALEGAGLTPSDIDYVEAHGTGTPIGDAVELALGLDPDGVRSPAVSATLIMTGHPLGAAGLAILDELLLMLE 224 (254)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEccCCcCccccHHHHHHHHHHhCCCCCceeccccccccchHHHHHHHHHHHHHHHh
Confidence 346688999999999999999998765 333332332223333333332 1112234565667777766666655555
Q ss_pred cC
Q 011007 240 VH 241 (496)
Q Consensus 240 ~~ 241 (496)
..
T Consensus 225 ~~ 226 (254)
T cd00327 225 HE 226 (254)
T ss_pred CC
Confidence 43
No 154
>PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=90.08 E-value=1.2 Score=45.12 Aligned_cols=84 Identities=14% Similarity=0.148 Sum_probs=56.1
Q ss_pred hHHHHHHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCCceee---EecCCCcchHHHHHHHHHHH
Q 011007 161 EAELVIFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSNIKSF---NLSGMGCSAGLISIDLARDL 237 (496)
Q Consensus 161 ea~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~~~~~---dl~g~gCsg~l~al~lA~~l 237 (496)
.......++.+++|+++|++++|||.++... ..+..-.++.++||++.+-... +.++++|+..+..|. ++
T Consensus 216 ~~~~~~~~~i~~~l~~~g~~~~di~~~~~h~----~~~~~~~~~~~~lg~~~~~~~~~~~~~Gn~~~a~~~~~L~---~~ 288 (319)
T PRK09352 216 FAVRELAKVAREALEAAGLTPEDIDWLVPHQ----ANLRIIDATAKKLGLPMEKVVVTVDKYGNTSAASIPLALD---EA 288 (319)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEECC----CCHHHHHHHHHHhCCCHHHhhhhHHhhCCHHHHHHHHHHH---HH
Confidence 4455567899999999999999999998653 2445667899999998532222 344455555555553 34
Q ss_pred HhcC---CCCEEEEEEE
Q 011007 238 LQVH---PNSNAVVVST 251 (496)
Q Consensus 238 L~~~---~~~~aLVVs~ 251 (496)
++.+ +++++|+++.
T Consensus 289 ~~~g~~~~Gd~vll~s~ 305 (319)
T PRK09352 289 VRDGRIKRGDLVLLEGF 305 (319)
T ss_pred HHcCCCCCCCEEEEEEE
Confidence 4443 3567776664
No 155
>PRK09050 beta-ketoadipyl CoA thiolase; Validated
Probab=89.96 E-value=0.85 Score=48.47 Aligned_cols=94 Identities=19% Similarity=0.247 Sum_probs=57.1
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCCceeeEecCC--------CcchHHHHHHHHHHH
Q 011007 166 IFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSNIKSFNLSGM--------GCSAGLISIDLARDL 237 (496)
Q Consensus 166 a~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~~~~~dl~g~--------gCsg~l~al~lA~~l 237 (496)
...|++++|+++|++|+|||.+-++ ...+...-...+.||+.++-..+|.+|- |++|....++++.+|
T Consensus 299 ~~~a~~~al~~Agl~~~DId~~ei~----D~f~~~~l~~~e~lg~~~~~~pvN~~GG~la~Ghp~gasG~~~~~e~~~qL 374 (401)
T PRK09050 299 PAPATRKLLARLGLTIDQFDVIELN----EAFAAQGLAVLRQLGLADDDARVNPNGGAIALGHPLGMSGARLVLTALHQL 374 (401)
T ss_pred HHHHHHHHHHHcCCCHHHCCccccC----cHhHHHHHHHHHHcCCCCCCCCEeCCCchHhcCCchhHHHHHHHHHHHHHH
Confidence 3579999999999999999988633 1123333456678898543356666652 334444555566665
Q ss_pred HhcCCCCEEEEEEECCCCCCCccCCCccccccccccccccEEEEEec
Q 011007 238 LQVHPNSNAVVVSTEIITPNYYQGNERAMLLPNCLFRMGGAAILLSN 284 (496)
Q Consensus 238 L~~~~~~~aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAaA~lLs~ 284 (496)
-.. ..++.|+ +.|.-|-.+.|+|+++
T Consensus 375 r~~-~~~~g~~--------------------~~c~~gG~g~a~~~e~ 400 (401)
T PRK09050 375 ERT-GGRYALC--------------------TMCIGVGQGIALAIER 400 (401)
T ss_pred Hhc-CCCeEEE--------------------EEcccccceeEEEEEe
Confidence 432 2234332 3455566666777764
No 156
>PRK13359 beta-ketoadipyl CoA thiolase; Provisional
Probab=89.29 E-value=1 Score=47.85 Aligned_cols=94 Identities=20% Similarity=0.234 Sum_probs=58.3
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCCceeeEecCC--------CcchHHHHHHHHHHH
Q 011007 166 IFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSNIKSFNLSGM--------GCSAGLISIDLARDL 237 (496)
Q Consensus 166 a~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~~~~~dl~g~--------gCsg~l~al~lA~~l 237 (496)
...|++++|+++|++|+|||.+-++ .......-...+.||+.++-..+|.+|. |++|...-++++.+|
T Consensus 298 ~~~A~~~al~~AGl~~~DID~iei~----dafa~~~l~~~e~lg~~~~~~pvN~~GG~la~GHp~gasG~~~v~e~~~qL 373 (400)
T PRK13359 298 PAPATQKLLARLGMTLDQFDVIELN----EAFASQGLAVLRELGLADDDARVNPNGGAIALGHPLGASGARLVTTALYQL 373 (400)
T ss_pred HHHHHHHHHHHhCCCHHHcCcCccC----cHhHHHHHHHHHHcCCCCCCCCEECCCchhhcCCchhHHHHHHHHHHHHHH
Confidence 3689999999999999999988633 1122334456678888433356666652 344555555666665
Q ss_pred HhcCCCCEEEEEEECCCCCCCccCCCccccccccccccccEEEEEec
Q 011007 238 LQVHPNSNAVVVSTEIITPNYYQGNERAMLLPNCLFRMGGAAILLSN 284 (496)
Q Consensus 238 L~~~~~~~aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAaA~lLs~ 284 (496)
-.. ..++.|+ +.|.-|..+.|+||++
T Consensus 374 ~~~-~~~~g~~--------------------~~c~~gG~g~a~~ie~ 399 (400)
T PRK13359 374 ERT-GGRFALC--------------------TMCIGVGQGIAIAIER 399 (400)
T ss_pred hhc-CCCeEEE--------------------EEcccCCceeEEEEEe
Confidence 432 2344433 3455566677777765
No 157
>PRK08242 acetyl-CoA acetyltransferase; Validated
Probab=88.93 E-value=1 Score=47.85 Aligned_cols=91 Identities=21% Similarity=0.333 Sum_probs=57.3
Q ss_pred HHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCCceeeEecC--------CCcchHHHHHHHHHHHH
Q 011007 167 FSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSNIKSFNLSG--------MGCSAGLISIDLARDLL 238 (496)
Q Consensus 167 ~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~~~~~dl~g--------~gCsg~l~al~lA~~lL 238 (496)
..|++++|+++|++|+|||.+=++ ...+...-...+.||+.+ ..+|++| .|++|....+.++..|-
T Consensus 303 ~~a~~~al~~AGl~~~DID~~ei~----daFa~~~l~~~e~lG~~~--~~vN~~GG~la~GHP~GAsG~~~~~~l~~~L~ 376 (402)
T PRK08242 303 VPATRKALAKAGLTVDDIDLFELN----EAFASVVLRFMQALDIPH--DKVNVNGGAIAMGHPLGATGAMILGTVLDELE 376 (402)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEec----chhhHHHHHHHHHhCCCC--cCCCcCCCHHhcCCcHHHHHHHHHHHHHHHHH
Confidence 469999999999999999998643 112333445677888753 2456654 24444455555555553
Q ss_pred hcCCCCEEEEEEECCCCCCCccCCCccccccccccccccEEEEEec
Q 011007 239 QVHPNSNAVVVSTEIITPNYYQGNERAMLLPNCLFRMGGAAILLSN 284 (496)
Q Consensus 239 ~~~~~~~aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAaA~lLs~ 284 (496)
+.+ .++.| .+.|.-|-.+.|+||++
T Consensus 377 ~~~-~~~g~--------------------~~~c~ggG~g~a~~~e~ 401 (402)
T PRK08242 377 RRG-KRTAL--------------------ITLCVGGGMGIATIIER 401 (402)
T ss_pred hcC-CCeEE--------------------EEEcccCCceeEEEEEe
Confidence 322 23333 34566777788888875
No 158
>PRK06366 acetyl-CoA acetyltransferase; Provisional
Probab=88.80 E-value=1.2 Score=46.96 Aligned_cols=75 Identities=24% Similarity=0.296 Sum_probs=50.4
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCCceeeEecC--------CCcchHHHHHHHHHHH
Q 011007 166 IFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSNIKSFNLSG--------MGCSAGLISIDLARDL 237 (496)
Q Consensus 166 a~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~~~~~dl~g--------~gCsg~l~al~lA~~l 237 (496)
...|++++|+++|++|+|||++-++= ......-+-.+.||+..+ .+|.+| .||+|....+.++.+|
T Consensus 287 ~~~A~~~al~~Agl~~~DiDv~Ei~d----aFa~~~l~~le~lgl~g~--~vN~~GG~la~GHP~GatG~~~~~~l~~qL 360 (388)
T PRK06366 287 PIPATRKLLEKQNKSIDYYDLVEHNE----AFSIASIIVRDQLKIDNE--RFNVNGGAVAIGHPIGNSGSRIIVTLINAL 360 (388)
T ss_pred HHHHHHHHHHHcCCCHHHcceeeccc----hhHHHHHHHHHHhCCCCC--ccCCCCchhhhCCCcCCCHHHHHHHHHHHH
Confidence 36899999999999999999885441 112333455667787643 555554 3677777788888887
Q ss_pred HhcCCCCEEE
Q 011007 238 LQVHPNSNAV 247 (496)
Q Consensus 238 L~~~~~~~aL 247 (496)
-+.+ .++.|
T Consensus 361 ~~~~-~~~g~ 369 (388)
T PRK06366 361 KTRH-MKTGL 369 (388)
T ss_pred HhcC-CCeEE
Confidence 6543 34443
No 159
>PRK06504 acetyl-CoA acetyltransferase; Provisional
Probab=88.09 E-value=3.4 Score=43.73 Aligned_cols=58 Identities=9% Similarity=-0.001 Sum_probs=43.8
Q ss_pred hccccEEEeccCCHHHHHHHHHHcCCChhhHhhhhhhhcccCCccCCch---HHHHHHHHHh
Q 011007 382 KQAFEHFCIHAGGRAVIDELQKNLQLSAEHVEASRMTLHRFGNTSSSSL---WYEMSYIEEK 440 (496)
Q Consensus 382 ~~did~f~~H~~~~~v~~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi---~~~La~~~~~ 440 (496)
++|||.+=+|-.-....-...+.||+.++++.+| --+--+||...++- ...|.+.+++
T Consensus 305 ~~Did~~Ei~d~Fa~~~l~~~e~lG~~~~pvN~~-GG~la~Ghp~gatG~r~~~~l~~~lr~ 365 (390)
T PRK06504 305 IDDIDLYEVNEAFASVPLAWLKATGADPERLNVN-GGAIALGHPLGASGTKLMTTLVHALKQ 365 (390)
T ss_pred HHHCCEEEecccchHHHHHHHHHhCCCCCCcCCC-CcHHhcCCCcchhHHHHHHHHHHHHHh
Confidence 4899999999998777778889999998877542 23345899887776 6667666654
No 160
>PRK05790 putative acyltransferase; Provisional
Probab=87.94 E-value=3 Score=44.00 Aligned_cols=84 Identities=12% Similarity=0.016 Sum_probs=51.6
Q ss_pred hccccEEEeccCCHHHHHHHHHHcCCChhhHhhhhhhhcccCCccCCchHHHHHHHHHhCCCCCCCEEEEEeechhHhhh
Q 011007 382 KQAFEHFCIHAGGRAVIDELQKNLQLSAEHVEASRMTLHRFGNTSSSSLWYEMSYIEEKGRMKKGDRVWQIAFGSGFKCN 461 (496)
Q Consensus 382 ~~did~f~~H~~~~~v~~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~i~~Gd~Vll~~fG~G~~~~ 461 (496)
.+|||.+-+|-.-....-...+.||+.+..+.++ --.--+||...++=...+.++..+=+-+.+.+.+.-.-|.|....
T Consensus 308 ~~did~~e~~d~f~~~~l~~~e~lg~~~~pvN~~-GG~l~~Ghp~gatG~~~~~e~~~qL~~~~~~~gl~~~~~~~g~g~ 386 (393)
T PRK05790 308 LADLDLIEINEAFAAQALAVEKELGLDPEKVNVN-GGAIALGHPIGASGARILVTLLHEMKRRGAKKGLATLCIGGGQGV 386 (393)
T ss_pred HHHCCEEEeCcHHHHHHHHHHHHhCCChhhcCCC-cchhhhCcchhhhHHHHHHHHHHHHHhcCCCeEEEEEeccCCcee
Confidence 3899999998875554455678899987766432 234458999888866666655443111233344444445555556
Q ss_pred heeeE
Q 011007 462 SAVWK 466 (496)
Q Consensus 462 sav~r 466 (496)
+++++
T Consensus 387 ~~~~e 391 (393)
T PRK05790 387 ALIVE 391 (393)
T ss_pred EEEEE
Confidence 66665
No 161
>TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases. This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatt
Probab=87.69 E-value=1.9 Score=45.48 Aligned_cols=83 Identities=14% Similarity=0.031 Sum_probs=51.5
Q ss_pred hccccEEEeccCCHHHHHHHHHHcCCChhhHhhhhhhhcccCCccCCchHHHHHHHHHhCCCCCCCEEEEEeechhHhhh
Q 011007 382 KQAFEHFCIHAGGRAVIDELQKNLQLSAEHVEASRMTLHRFGNTSSSSLWYEMSYIEEKGRMKKGDRVWQIAFGSGFKCN 461 (496)
Q Consensus 382 ~~did~f~~H~~~~~v~~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~i~~Gd~Vll~~fG~G~~~~ 461 (496)
++|||.+-+|-......-...+.||+....+.++ -..--+||+..++-...+.++..+=+=+.+.+.+.-+.+.|-.-.
T Consensus 303 ~~did~~e~~d~fa~~~~~~~e~lG~~~~pvn~~-GG~l~~Ghp~gasG~~~~~e~~~qL~g~~~~~gl~~~~~~gG~g~ 381 (386)
T TIGR01930 303 ISDIDLFEINEAFAAQVLACIKELGLDLEKVNVN-GGAIALGHPLGASGARIVTTLLHELKRRGGRYGLATICIGGGQGI 381 (386)
T ss_pred HHHCCeeehcchhHHHHHHHHHHhCCChhhcCCC-CChHhhCCcHHHHHHHHHHHHHHHHHhcCCCEEEEEEeccCCceE
Confidence 3899999999887655555678899865555321 233458999888777777665543111245566665555443334
Q ss_pred heee
Q 011007 462 SAVW 465 (496)
Q Consensus 462 sav~ 465 (496)
++++
T Consensus 382 ~~~~ 385 (386)
T TIGR01930 382 AVIL 385 (386)
T ss_pred EEEe
Confidence 4443
No 162
>PRK06954 acetyl-CoA acetyltransferase; Provisional
Probab=87.67 E-value=2.4 Score=44.95 Aligned_cols=84 Identities=18% Similarity=0.116 Sum_probs=50.7
Q ss_pred hccccEEEeccCCHHHHHHHHHHcCCChhhHhhhhhhhcccCCccCCchHHHHHHHHHhCCCCCCCE-EEEEeechhHhh
Q 011007 382 KQAFEHFCIHAGGRAVIDELQKNLQLSAEHVEASRMTLHRFGNTSSSSLWYEMSYIEEKGRMKKGDR-VWQIAFGSGFKC 460 (496)
Q Consensus 382 ~~did~f~~H~~~~~v~~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~i~~Gd~-Vll~~fG~G~~~ 460 (496)
++|||.+=+|-.-....-...+.||+.++++.+| -..--+||...+|=...+.++..+=+-+.|++ |..+..|.|..
T Consensus 312 ~~Did~~ei~d~fa~~~l~~~e~lg~~~~~vN~~-GG~~a~Ghp~gasG~~~~~~~~~qL~~~~g~~~v~~~c~~gg~g- 389 (397)
T PRK06954 312 AAEVDLFEINEAFAVVTMAAMKEHGLPHEKVNVN-GGACALGHPIGASGARILVTLIGALRARGGKRGVASLCIGGGEA- 389 (397)
T ss_pred HHHCCEEehhhHHHHHHHHHHHHhCCCcccCCcC-CChHHhcccHHHHHHHHHHHHHHHHHhcCCCeEEEEEccccchh-
Confidence 3899999888876555455568899988877542 34455899988885554444433211134555 33444555543
Q ss_pred hheeeEe
Q 011007 461 NSAVWKC 467 (496)
Q Consensus 461 ~sav~r~ 467 (496)
.+++++.
T Consensus 390 ~a~~~e~ 396 (397)
T PRK06954 390 TAMGIEL 396 (397)
T ss_pred hEEEEEe
Confidence 4555553
No 163
>PRK07661 acetyl-CoA acetyltransferase; Provisional
Probab=87.59 E-value=2.7 Score=44.48 Aligned_cols=84 Identities=11% Similarity=0.069 Sum_probs=48.7
Q ss_pred hccccEEEeccCCHHHHHHHHHHcCCChhhHhhhhhhhcccCCccCCchHHHHHHHHHhCCCCCCCEEEE-EeechhHhh
Q 011007 382 KQAFEHFCIHAGGRAVIDELQKNLQLSAEHVEASRMTLHRFGNTSSSSLWYEMSYIEEKGRMKKGDRVWQ-IAFGSGFKC 460 (496)
Q Consensus 382 ~~did~f~~H~~~~~v~~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~i~~Gd~Vll-~~fG~G~~~ 460 (496)
++|||.+-+|-.-...--...+.||+.++++.+| -..--+||...+|=...+.++..+=+-+.|.+.+. +..|.|. -
T Consensus 306 ~~did~~ei~d~f~~~~l~~~e~lg~~~~~vN~~-GG~~a~Ghp~gasG~~~~~el~~qL~~~~~~~g~~~~c~~gg~-g 383 (391)
T PRK07661 306 LSDIGLFELNEAFASQSIQVIRELGLDEEKVNVN-GGAIALGHPLGCTGAKLTLSLIHEMKRRNEQFGIVTMCIGGGM-G 383 (391)
T ss_pred HHHCCEEEeCCHHHHHHHHHHHHcCCCCCCCCCC-CChHHhCCcHHHHHHHHHHHHHHHHHhcCCCeEEEEEccccCh-h
Confidence 4899999998877666666678999987776542 33445788777665554444433211123333332 3333333 3
Q ss_pred hheeeEe
Q 011007 461 NSAVWKC 467 (496)
Q Consensus 461 ~sav~r~ 467 (496)
.+++|+.
T Consensus 384 ~a~~~e~ 390 (391)
T PRK07661 384 AAGVFEL 390 (391)
T ss_pred hEEEEEe
Confidence 4556553
No 164
>TIGR02430 pcaF beta-ketoadipyl CoA thiolase. Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid.
Probab=87.22 E-value=1.3 Score=47.19 Aligned_cols=70 Identities=21% Similarity=0.314 Sum_probs=45.4
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCCceeeEecCC--------CcchHHHHHHHHHHH
Q 011007 166 IFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSNIKSFNLSGM--------GCSAGLISIDLARDL 237 (496)
Q Consensus 166 a~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~~~~~dl~g~--------gCsg~l~al~lA~~l 237 (496)
...|++++|+++|++|+|||.+-++ ...+...-+..+.||+.++-..+|.+|- |++|....++++.+|
T Consensus 298 ~~~a~~~al~~Agl~~~DID~~ei~----D~f~~~~l~~~e~lG~~~~~~pvN~~GG~la~GHp~gasG~~~~~e~~~qL 373 (400)
T TIGR02430 298 PVPATQKLLARAGLSIDQFDVIELN----EAFAAQALAVLRELGLADDDARVNPNGGAIALGHPLGASGARLVLTALRQL 373 (400)
T ss_pred HHHHHHHHHHHhCCCHHHCCCcccC----cHHHHHHHHHHHHcCCCCCCCeECCCCchHhccChHHHHHHHHHHHHHHHH
Confidence 3578999999999999999988532 1123344556678898543346666652 344445556666666
Q ss_pred Hh
Q 011007 238 LQ 239 (496)
Q Consensus 238 L~ 239 (496)
-.
T Consensus 374 r~ 375 (400)
T TIGR02430 374 ER 375 (400)
T ss_pred Hh
Confidence 43
No 165
>PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated
Probab=87.13 E-value=1.5 Score=45.66 Aligned_cols=88 Identities=14% Similarity=0.177 Sum_probs=50.4
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEee-ccCCCCCCcHHHHHHHHcCCCC-Cce----eeEecCCCcchHHHHHHHHHHHH
Q 011007 165 VIFSAMDSLLQKTGLKPKDIDILIVN-CSLFSPTPSLSAMVINKYKLRS-NIK----SFNLSGMGCSAGLISIDLARDLL 238 (496)
Q Consensus 165 la~~Aa~~aL~~agi~p~dID~LI~~-ss~~~~~Ps~a~~I~~~Lgl~~-~~~----~~dl~g~gCsg~l~al~lA~~lL 238 (496)
-..+|.+++|+++|++|+|||.|+.. +++.+-....+..+.+-+|-.. ..+ .-.+...+.+++...+-.+-..+
T Consensus 235 gl~~ai~~AL~~agl~~~dId~v~ah~~gt~~~d~~e~~A~~~~f~~~~~~~~~~~~k~~~Gh~~aAaG~~~~~~a~~~~ 314 (348)
T PRK06147 235 GLTQAIRAALAEAGCGLEDMDYRIADLNGEQYRFKEAALAEMRLFRVRKEFFDLWHPAECIGEIGAAIGPALLGVALAAS 314 (348)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEcCCCCCccchHHHHHHHHHHhhhccCCCceecchHhhcchHHHHHHHHHHHHHHHH
Confidence 35688999999999999999998754 4433322333344455454311 111 11233233344444444444455
Q ss_pred hcC--CCCEEEEEEEC
Q 011007 239 QVH--PNSNAVVVSTE 252 (496)
Q Consensus 239 ~~~--~~~~aLVVs~E 252 (496)
+.+ +..++||.++.
T Consensus 315 ~~g~~~g~~~L~~s~~ 330 (348)
T PRK06147 315 RKGYGPGPNVLCHLSD 330 (348)
T ss_pred HcCcCCCCcEEEEecC
Confidence 555 56789998854
No 166
>COG0332 FabH 3-oxoacyl-[acyl-carrier-protein]
Probab=86.89 E-value=1.3 Score=45.59 Aligned_cols=53 Identities=21% Similarity=0.321 Sum_probs=43.4
Q ss_pred HHHHhHHHHHHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCC
Q 011007 157 AARGEAELVIFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSN 213 (496)
Q Consensus 157 ~~~~ea~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~ 213 (496)
+-.+.+..++..+++++|++++++++|||.+|.. +.-..+-..++++||++.+
T Consensus 216 ~vfk~av~~~~~~~~~~L~~~~l~~~dId~~vpH----Qan~ri~~~i~~~l~~~~~ 268 (323)
T COG0332 216 EVFKFAVRAMPKAIEEVLEKAGLTPEDIDWFVPH----QANLRIIEAIAKKLGIPEE 268 (323)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEccc----cccHHHHHHHHHHcCCCHH
Confidence 4456799999999999999999999999999843 3344566789999999754
No 167
>PF02803 Thiolase_C: Thiolase, C-terminal domain; InterPro: IPR020617 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2.3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 2WUA_B 4E1L_B 3SVK_A 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2IB8_B 2IBU_A 2IB9_C ....
Probab=86.64 E-value=2.9 Score=36.91 Aligned_cols=70 Identities=24% Similarity=0.408 Sum_probs=46.4
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCCceeeEecC--------CCcchHHHHHHHHHHH
Q 011007 166 IFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSNIKSFNLSG--------MGCSAGLISIDLARDL 237 (496)
Q Consensus 166 a~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~~~~~dl~g--------~gCsg~l~al~lA~~l 237 (496)
...|++++|+++|++++|||.+=++-. .-+..-...+.||+.+ ..+|.+| .||+|...-++++..|
T Consensus 24 p~~A~~~al~~ag~~~~did~~Ei~Ea----FA~~~l~~~~~lg~~~--~~vN~~GG~la~GHP~gasG~r~~~~l~~~L 97 (123)
T PF02803_consen 24 PVPAARKALERAGLTPDDIDVIEINEA----FAAQVLAFLEALGLDP--EKVNPNGGALALGHPLGASGARLVVELAHQL 97 (123)
T ss_dssp HHHHHHHHHHHHT--GGGESEEEE--S----BHHHHHHHHHHHTTGG--GGBSTT--HHHH-BHTTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCccccchhhccch----hhhHHHHhhccccccc--cccCcccccccccccccccccchhhhhHHHH
Confidence 468999999999999999999865511 2233445677788763 3555554 3677778888888887
Q ss_pred HhcC
Q 011007 238 LQVH 241 (496)
Q Consensus 238 L~~~ 241 (496)
-+.+
T Consensus 98 ~~~~ 101 (123)
T PF02803_consen 98 RRRG 101 (123)
T ss_dssp HHHT
T ss_pred HHhc
Confidence 6643
No 168
>PRK07801 acetyl-CoA acetyltransferase; Provisional
Probab=86.16 E-value=2.8 Score=44.12 Aligned_cols=84 Identities=12% Similarity=0.010 Sum_probs=52.4
Q ss_pred hccccEEEeccCCHHHHHHHHHHcCCChhhHhhhhhhhcccCCccCCchHHHHHHHHHhCCCCCCCEEEEEeechhHhhh
Q 011007 382 KQAFEHFCIHAGGRAVIDELQKNLQLSAEHVEASRMTLHRFGNTSSSSLWYEMSYIEEKGRMKKGDRVWQIAFGSGFKCN 461 (496)
Q Consensus 382 ~~did~f~~H~~~~~v~~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~i~~Gd~Vll~~fG~G~~~~ 461 (496)
.+|||.+=+|-.-....-...+.||+.++.+.++ --.--+||...++-...+.++..+=+-+.+.+.+....|.|-...
T Consensus 297 ~~did~~e~~d~Fa~~~~~~~e~lG~~~~pvN~~-GG~l~~Ghp~gasG~~~~~e~~~qL~~~~~~~gl~~~~gggg~~~ 375 (382)
T PRK07801 297 IDDIDVVEINEAFAPVVLAWLKETGADPAKVNPN-GGAIALGHPLGATGAKLMTTLLHELERTGGRYGLQTMCEGGGTAN 375 (382)
T ss_pred HHHcCEeeecccchHHHHHHHHHhCCCchhcCCC-cchhhhcCcHHHHHHHHHHHHHHHHHhcCCCEEEEEEccccccee
Confidence 4899999999988777777889999998877532 233458888887766655554432110222333434455454445
Q ss_pred heeeE
Q 011007 462 SAVWK 466 (496)
Q Consensus 462 sav~r 466 (496)
+++++
T Consensus 376 ~~vl~ 380 (382)
T PRK07801 376 VTIIE 380 (382)
T ss_pred EEEEE
Confidence 55554
No 169
>PRK07850 acetyl-CoA acetyltransferase; Provisional
Probab=86.01 E-value=4.3 Score=42.94 Aligned_cols=92 Identities=18% Similarity=0.250 Sum_probs=56.9
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCCceeeEecC--------CCcchHHHHHHHHHHH
Q 011007 166 IFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSNIKSFNLSG--------MGCSAGLISIDLARDL 237 (496)
Q Consensus 166 a~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~~~~~dl~g--------~gCsg~l~al~lA~~l 237 (496)
...|++++|+++|++|+|||++=++- ..+...-+..+.||+.. ..+|.+| .||+|...-++++.+|
T Consensus 287 ~~~a~~~al~~agl~~~did~~ei~d----~F~~~~l~~~e~lg~~~--~pvN~~GG~la~Ghp~gatG~~~v~e~~~qL 360 (387)
T PRK07850 287 PVQATAKVLEKAGMKIGDIDLVEINE----AFASVVLSWAQVHEPDM--DKVNVNGGAIALGHPVGSTGARLITTALHEL 360 (387)
T ss_pred HHHHHHHHHHHcCCCHHHcCeeeecc----cchHHHHHHHHHcCCCC--CCcCCCCchhhcCCCcchhHHHHHHHHHHHH
Confidence 46899999999999999999986541 11222333446788753 2556554 2344555556666666
Q ss_pred HhcCCCCEEEEEEECCCCCCCccCCCccccccccccccccEEEEEec
Q 011007 238 LQVHPNSNAVVVSTEIITPNYYQGNERAMLLPNCLFRMGGAAILLSN 284 (496)
Q Consensus 238 L~~~~~~~aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAaA~lLs~ 284 (496)
-+. ..++.|+ +.|.-|..++|+||++
T Consensus 361 ~~~-~~~~g~~--------------------~~c~~gg~g~a~~~e~ 386 (387)
T PRK07850 361 ERT-DKSTALI--------------------TMCAGGALSTGTIIER 386 (387)
T ss_pred Hhc-CCCeEEE--------------------EEccccCceeEEEEEe
Confidence 443 2344332 3456666777788764
No 170
>PRK06445 acetyl-CoA acetyltransferase; Provisional
Probab=85.83 E-value=2.8 Score=44.42 Aligned_cols=67 Identities=30% Similarity=0.408 Sum_probs=46.3
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCCceeeEecC--------CCcchHHHHHHHHHHH
Q 011007 166 IFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSNIKSFNLSG--------MGCSAGLISIDLARDL 237 (496)
Q Consensus 166 a~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~~~~~dl~g--------~gCsg~l~al~lA~~l 237 (496)
...|++++|+++|++|+|||.+=++- ..+...-+-.+.||+.+ ..+|.+| .||+|...-++++.+|
T Consensus 294 ~~~a~~~al~~Agl~~~dId~~e~~d----~f~~~~l~~~e~lg~~~--~~vN~~GG~la~Ghp~gatG~~~v~e~~~qL 367 (394)
T PRK06445 294 PVPASKKALEKAGLSVKDIDLWEINE----AFAVVVLYAIKELGLDP--ETVNIKGGAIAIGHPLGATGARIVGTLARQL 367 (394)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEecc----cchHHHHHHHHHhCCCc--cccCCCCCHHHcCCCccchHHHHHHHHHHHH
Confidence 46799999999999999999985442 22344455667788753 2344443 3677777777777777
Q ss_pred H
Q 011007 238 L 238 (496)
Q Consensus 238 L 238 (496)
-
T Consensus 368 ~ 368 (394)
T PRK06445 368 Q 368 (394)
T ss_pred H
Confidence 5
No 171
>PRK07851 acetyl-CoA acetyltransferase; Provisional
Probab=85.38 E-value=3.2 Score=44.17 Aligned_cols=85 Identities=8% Similarity=-0.049 Sum_probs=49.9
Q ss_pred hccccEEEeccCCHHHHHHHHHHcCCChhhHhhhhhhhcccCCccCCchHHHHHHHHHhCCCCCCCEEEEEeechhHhhh
Q 011007 382 KQAFEHFCIHAGGRAVIDELQKNLQLSAEHVEASRMTLHRFGNTSSSSLWYEMSYIEEKGRMKKGDRVWQIAFGSGFKCN 461 (496)
Q Consensus 382 ~~did~f~~H~~~~~v~~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~i~~Gd~Vll~~fG~G~~~~ 461 (496)
++|||.+=+|-.-...--...+.||+.++.+.+| -..--+||...++-...+.++..+=+-+.|.+.+....+.|-.-.
T Consensus 320 ~~did~~ei~d~f~~~~l~~le~lg~~~~pvN~~-GG~l~~Ghp~gasg~~~~~~~~~qL~~~~~~~g~~~~~~~gg~g~ 398 (406)
T PRK07851 320 IDDIDLVEINEAFAAQVLPSARELGIDEDKLNVS-GGAIALGHPFGMTGARITTTLLNNLQTHDKTFGLETMCVGGGQGM 398 (406)
T ss_pred HHHCCeehhhhHHHHHHHHHHHHhCCCccccCCC-CChHhhcCcHHHHHHHHHHHHHHHHHhcCCCeEEEEEccccChhh
Confidence 3889988777665444444458899877665432 234458999888777777665543222344444443333333345
Q ss_pred heeeEe
Q 011007 462 SAVWKC 467 (496)
Q Consensus 462 sav~r~ 467 (496)
+++++.
T Consensus 399 a~~~e~ 404 (406)
T PRK07851 399 AMVLER 404 (406)
T ss_pred EEEEEe
Confidence 566654
No 172
>cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs. PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions.
Probab=85.20 E-value=2.5 Score=44.00 Aligned_cols=87 Identities=15% Similarity=0.089 Sum_probs=59.9
Q ss_pred hHHHHHHHHHHHHHHHc--CCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCCc------eeeEecCCCcchHHHHHH
Q 011007 161 EAELVIFSAMDSLLQKT--GLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSNI------KSFNLSGMGCSAGLISID 232 (496)
Q Consensus 161 ea~~la~~Aa~~aL~~a--gi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~~------~~~dl~g~gCsg~l~al~ 232 (496)
.+.....++++++|+++ |++++|||.+++... .+.+-..+.++||++++- ..-+.+++++++...+|.
T Consensus 256 ~~~~~~~~~i~~~L~~~~~g~~~~did~~~~H~~----~~~i~~~v~~~lgl~~~~~~~s~~~l~~~GN~~sasi~~~L~ 331 (361)
T cd00831 256 LVEKNLERVLRKLLARLGIGLFKLAFDHWCVHPG----GRAVLDAVEKALGLSPEDLEASRMVLRRYGNMSSSSVLYVLA 331 (361)
T ss_pred HHHHHHHHHHHHHhccccCCCccccceEEEECCC----ChHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchhccHHHHHH
Confidence 45566777899999999 999999999986643 224455689999997532 133677788888888887
Q ss_pred HHHHHHhcCCCCEEEEEEE
Q 011007 233 LARDLLQVHPNSNAVVVST 251 (496)
Q Consensus 233 lA~~lL~~~~~~~aLVVs~ 251 (496)
-+.+-=+..+++++|+++.
T Consensus 332 ~~~~~g~~~~Gd~vll~~~ 350 (361)
T cd00831 332 YMEAKGRVKRGDRGLLIAF 350 (361)
T ss_pred HHHHhCCCCCCCEEEEEEE
Confidence 6643111124567777664
No 173
>PRK09052 acetyl-CoA acetyltransferase; Provisional
Probab=84.24 E-value=2.2 Score=45.28 Aligned_cols=93 Identities=22% Similarity=0.304 Sum_probs=55.6
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCCceeeEecC--------CCcchHHHHHHHHHH
Q 011007 165 VIFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSNIKSFNLSG--------MGCSAGLISIDLARD 236 (496)
Q Consensus 165 la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~~~~~dl~g--------~gCsg~l~al~lA~~ 236 (496)
-...|++++|+++|++|+|||++-++ .......-...+.||+.. ..+|.+| .|++|....+.++.+
T Consensus 298 ~~~~A~~~al~~Agi~~~did~~ei~----D~f~~~~l~~~e~lg~~~--~~vN~~GG~la~GHp~gasG~~~~~~~~~~ 371 (399)
T PRK09052 298 GPIEAIPAALKQAGLKQDDLDWIELN----EAFAAQSLAVIRDLGLDP--SKVNPLGGAIALGHPLGATGAIRTATVVHG 371 (399)
T ss_pred hHHHHHHHHHHHcCCCHHHcCEEEeC----cHHHHHHHHHHHHhCCCC--cccCCCCchhhcCchHHHHHHHHHHHHHHH
Confidence 34689999999999999999998532 112233344567788752 2344443 144555555555555
Q ss_pred HHhcCCCCEEEEEEECCCCCCCccCCCccccccccccccccEEEEEec
Q 011007 237 LLQVHPNSNAVVVSTEIITPNYYQGNERAMLLPNCLFRMGGAAILLSN 284 (496)
Q Consensus 237 lL~~~~~~~aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAaA~lLs~ 284 (496)
|-+.+ .++.| .+.|.-|-.|+|+||++
T Consensus 372 L~~~~-~~~g~--------------------~~~c~~gg~g~a~~~e~ 398 (399)
T PRK09052 372 LRRTN-LKYGM--------------------VTMCVGTGMGAAGIFER 398 (399)
T ss_pred HHhcC-CCeEE--------------------EEEcccCCceeEEEEEe
Confidence 54322 23332 23466666777788764
No 174
>PLN02287 3-ketoacyl-CoA thiolase
Probab=84.16 E-value=5.1 Score=43.33 Aligned_cols=90 Identities=13% Similarity=0.104 Sum_probs=53.0
Q ss_pred hccccEEEeccCCHHHHHHHHHHcCCChhhHhhhhhhhcccCCccCCchHHHHHHHHHhCCCCCC--CEEE-EEeechhH
Q 011007 382 KQAFEHFCIHAGGRAVIDELQKNLQLSAEHVEASRMTLHRFGNTSSSSLWYEMSYIEEKGRMKKG--DRVW-QIAFGSGF 458 (496)
Q Consensus 382 ~~did~f~~H~~~~~v~~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~i~~G--d~Vl-l~~fG~G~ 458 (496)
++|||.+=+|-.-...--...+.||+.++++.+| -..--+||...+|=...+.++..+=+-+.| .+.+ .+..|.|
T Consensus 348 ~~DID~~Ei~daFa~~~l~~~e~lG~~~~pvN~s-GG~la~GHp~gAsG~~~v~~l~~qL~~~~~~~~~gl~~~c~ggG- 425 (452)
T PLN02287 348 LDDIDLFEINEAFASQFVYCCKKLGLDPEKVNVN-GGAIALGHPLGATGARCVATLLHEMKRRGKDCRFGVVSMCIGTG- 425 (452)
T ss_pred HHHCCEEEecchHHHHHHHHHHHcCCCccccCCC-CcHHhccCcHHHHHHHHHHHHHHHHHhcCCCCCeeEEEEccccC-
Confidence 4899999999655444444568999988777542 234447888766655444444332111222 3333 2333333
Q ss_pred hhhheeeEeeccCCC
Q 011007 459 KCNSAVWKCNKTIKT 473 (496)
Q Consensus 459 ~~~sav~r~~~~~~~ 473 (496)
.-.+++++.++.++.
T Consensus 426 ~g~a~~ie~~~~~~~ 440 (452)
T PLN02287 426 MGAAAVFERGDSVDE 440 (452)
T ss_pred ceeEEEEEecCchhh
Confidence 346888998888764
No 175
>PRK09051 beta-ketothiolase; Provisional
Probab=84.11 E-value=2.8 Score=44.44 Aligned_cols=92 Identities=20% Similarity=0.333 Sum_probs=56.2
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCCceeeEecCC--------CcchHHHHHHHHHHH
Q 011007 166 IFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSNIKSFNLSGM--------GCSAGLISIDLARDL 237 (496)
Q Consensus 166 a~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~~~~~dl~g~--------gCsg~l~al~lA~~l 237 (496)
...|++++|+++|++|+|||.+=++- ..+...-+..+.||+.+ ..+|.+|- |++|....+.++++|
T Consensus 294 ~~~a~~~al~~agi~~~did~~ei~d----~f~~~~~~~~e~lg~~~--~~vN~~GG~~a~Ghp~gAsG~~~~~~~~~~L 367 (394)
T PRK09051 294 PVPATQKALERAGLTVADLDVIEANE----AFAAQACAVTRELGLDP--AKVNPNGSGISLGHPVGATGAIITVKALYEL 367 (394)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEecC----ccHHHHHHHHHHhCCCc--cccCCCccHHHhcchHHHHHHHHHHHHHHHH
Confidence 46899999999999999999986531 13344555678899853 46666651 333444444455554
Q ss_pred HhcCCCCEEEEEEECCCCCCCccCCCccccccccccccccEEEEEec
Q 011007 238 LQVHPNSNAVVVSTEIITPNYYQGNERAMLLPNCLFRMGGAAILLSN 284 (496)
Q Consensus 238 L~~~~~~~aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAaA~lLs~ 284 (496)
-+.+ .++.| .+.|.-|-.+.|+|+++
T Consensus 368 ~~~~-~~~g~--------------------~~~c~~gG~g~a~~~e~ 393 (394)
T PRK09051 368 QRIG-GRYAL--------------------VTMCIGGGQGIAAIFER 393 (394)
T ss_pred HhcC-CCEEE--------------------EEEccccChhhEEEEEe
Confidence 3321 23322 23456666677777764
No 176
>COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism]
Probab=83.69 E-value=4.1 Score=42.67 Aligned_cols=95 Identities=17% Similarity=0.253 Sum_probs=64.7
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCC-----CCceee-EecCCCcchHHHHHHHHH
Q 011007 162 AELVIFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLR-----SNIKSF-NLSGMGCSAGLISIDLAR 235 (496)
Q Consensus 162 a~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~-----~~~~~~-dl~g~gCsg~l~al~lA~ 235 (496)
-..-...|+++.+++.|.+|+|.|.+++.+ |.|-+....+..++.+ +..... .++++.|.+.+.+| |.
T Consensus 207 Y~~~~~~a~~~~~~k~gls~~dfdy~vfH~----P~~k~~~ka~k~l~~~~e~v~~~l~~~~~vGN~YtgS~~L~L--as 280 (377)
T COG3425 207 YFKHVENAAKGYMEKTGLSPDDFDYIVFHQ----PNGKFPKKAAKSLGFKEEQVKPGLVYPQRIGNTYTGSLLLGL--AS 280 (377)
T ss_pred HHHHHHHHHHHHHHHhCCChhhhCeEEecC----CCCchHHHHHHHhCccHhhcCccchhhhhcCcccchhHHHHH--HH
Confidence 345577899999999999999999998652 4455556666666655 333333 58889999988665 33
Q ss_pred HHHhcC-CCCEEEEEEECCCCCCCccCCCccccccccccccccEEEEEec
Q 011007 236 DLLQVH-PNSNAVVVSTEIITPNYYQGNERAMLLPNCLFRMGGAAILLSN 284 (496)
Q Consensus 236 ~lL~~~-~~~~aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAaA~lLs~ 284 (496)
-|=++. +++++|+++ ||-||++-..|-
T Consensus 281 ~L~~a~~~G~rIl~~S----------------------YGSGa~s~~fs~ 308 (377)
T COG3425 281 LLDNAKLPGDRILLFS----------------------YGSGAGSEAFSI 308 (377)
T ss_pred HHhhcCCCCCEEEEEe----------------------eCCCcceeEEEE
Confidence 333333 455666543 677887777663
No 177
>PRK07108 acetyl-CoA acetyltransferase; Provisional
Probab=83.29 E-value=4.2 Score=43.11 Aligned_cols=55 Identities=5% Similarity=-0.047 Sum_probs=36.1
Q ss_pred hccccEEEeccCCHHHHHHHHHHcCCChhhHhhhhhhhcccCCccCCchHHHHHHH
Q 011007 382 KQAFEHFCIHAGGRAVIDELQKNLQLSAEHVEASRMTLHRFGNTSSSSLWYEMSYI 437 (496)
Q Consensus 382 ~~did~f~~H~~~~~v~~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~ 437 (496)
++|||.+-+|-.-....-...+.||+.++++.++ -..--+||...++=...+..+
T Consensus 307 ~~Did~~ei~eafa~~~l~~~e~lg~~~~~vN~~-GG~~a~GHp~gatG~r~~~~l 361 (392)
T PRK07108 307 VDDIDLWELNEAFAVQVLYCRDTLGIPMDRLNVN-GGAIAVGHPYGVSGARLTGHA 361 (392)
T ss_pred HHHcCchHhhhHHHHHHHHHHHhcCCCccccCCC-CChHHhCcchhhhHHHHHHHH
Confidence 3899998888665444444578899988777542 234457888777655444443
No 178
>PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=82.91 E-value=2.9 Score=43.60 Aligned_cols=70 Identities=13% Similarity=0.111 Sum_probs=49.3
Q ss_pred hHHHHHHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCCcee-e--E-ecCCCcchHHHHHHHH
Q 011007 161 EAELVIFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSNIKS-F--N-LSGMGCSAGLISIDLA 234 (496)
Q Consensus 161 ea~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~~~~-~--d-l~g~gCsg~l~al~lA 234 (496)
.+....-.+++++|+++|++++|||.+++.. ..+.+-..+.++||++++-.. . + .+|++.++...+|+-+
T Consensus 239 ~~~~~~~~~i~~~L~~~gl~~~did~~v~HQ----~~~~i~~~i~~~Lgl~~ek~~~~~l~~~GNtssasip~~L~~~ 312 (353)
T PRK12880 239 MALECEPKSFKEILEFSKVDEKDIAFHLFHQ----SNAYLVDCIKEELKLNDDKVPNFIMEKYANLSACSLPALLCEL 312 (353)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEECC----CCHHHHHHHHHHhCCCHHHhhhhhHHhhCCHHHHHHHHHHHHH
Confidence 4555667789999999999999999998663 234556789999999853221 1 2 4456666666666533
No 179
>PLN03169 chalcone synthase family protein; Provisional
Probab=82.81 E-value=3.9 Score=43.29 Aligned_cols=87 Identities=16% Similarity=0.178 Sum_probs=56.5
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCCcee------eEecCCCcchHHHHHHHHH
Q 011007 162 AELVIFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSNIKS------FNLSGMGCSAGLISIDLAR 235 (496)
Q Consensus 162 a~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~~~~------~dl~g~gCsg~l~al~lA~ 235 (496)
+..-.-..++++|+++|++++|||.+.+...+.+ ..+-..++++||++++-.. -+.+|+++++...+|+.+.
T Consensus 279 ~~~~~~~~i~~~L~~~gl~~~did~~~~v~Hq~n--~~il~~v~~~Lgl~~ek~~~s~~~l~~~GNtsSasip~~L~~~~ 356 (391)
T PLN03169 279 IEDNIEGFCKKLMKKAGLVEKDYNDLFWAVHPGG--PAILNRLEKKLKLAPEKLECSRRALMDYGNVSSNTIVYVLEYMR 356 (391)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCCCcceEEecCCC--HHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchHhHHHHHHHHHH
Confidence 4445566779999999999999994433322222 4566779999999854322 3677888888888887654
Q ss_pred HH--Hh-cCCCCEEEEEE
Q 011007 236 DL--LQ-VHPNSNAVVVS 250 (496)
Q Consensus 236 ~l--L~-~~~~~~aLVVs 250 (496)
.- ++ ..+++++|+++
T Consensus 357 ~~~~~~~~~~gd~~ll~a 374 (391)
T PLN03169 357 EELKKKGEEDEEWGLILA 374 (391)
T ss_pred HhhcccCCCCCcEEEEEE
Confidence 21 11 11345666555
No 180
>PRK06205 acetyl-CoA acetyltransferase; Provisional
Probab=82.06 E-value=7.4 Score=41.37 Aligned_cols=85 Identities=11% Similarity=0.093 Sum_probs=48.4
Q ss_pred hccccEEEeccCCHHHHHHHHHHcCCCh---hhHhhhhhhhcccCCccCCchHHHHHHHHHhCCCCCCCEEEE-Eeechh
Q 011007 382 KQAFEHFCIHAGGRAVIDELQKNLQLSA---EHVEASRMTLHRFGNTSSSSLWYEMSYIEEKGRMKKGDRVWQ-IAFGSG 457 (496)
Q Consensus 382 ~~did~f~~H~~~~~v~~~i~~~Lgl~~---e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~i~~Gd~Vll-~~fG~G 457 (496)
++|||.+-+|-.-....-...+.||+.+ +++.++ -..--+||...++=...+.++..+=+-+.|.+.+. +..|.|
T Consensus 315 ~~Did~~ei~d~f~~~~l~~~e~lg~~~~~~~~vN~~-GG~la~Ghp~gatG~~~v~e~~~qL~~~~~~~gl~~~c~~gg 393 (404)
T PRK06205 315 LDDIDLIELNEAFAAQVLAVLKEWGFGADDEERLNVN-GSGISLGHPVGATGGRILATLLRELQRRQARYGLETMCIGGG 393 (404)
T ss_pred HHHCCEeeeccHHHHHHHHHHHHhCcCcccCCCcCCC-CCHHhhCCChhhhHHHHHHHHHHHHHhcCCCeEEEEEeccCC
Confidence 3899999999887666666778899876 344321 22334788887765555544433211123334433 333333
Q ss_pred HhhhheeeEee
Q 011007 458 FKCNSAVWKCN 468 (496)
Q Consensus 458 ~~~~sav~r~~ 468 (496)
.-.+++++.+
T Consensus 394 -~g~a~~~e~~ 403 (404)
T PRK06205 394 -QGLAAVFERV 403 (404)
T ss_pred -hhhEEEEEec
Confidence 3356666654
No 181
>PRK06690 acetyl-CoA acetyltransferase; Provisional
Probab=81.46 E-value=4.6 Score=42.31 Aligned_cols=70 Identities=19% Similarity=0.232 Sum_probs=47.8
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCCceeeEec--------CCCcchHHHHHHHHHH
Q 011007 165 VIFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSNIKSFNLS--------GMGCSAGLISIDLARD 236 (496)
Q Consensus 165 la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~~~~~dl~--------g~gCsg~l~al~lA~~ 236 (496)
-...|++++|+++|++|+|||.+..+- ......-...+.||+.+ ..++.+ -.|++|......+..+
T Consensus 259 ~~~~a~~~al~~Agl~~~Did~~ei~e----afa~~~~~~~e~lgl~~--~~vn~~GG~la~Ghp~GatG~~~~~~~~~q 332 (361)
T PRK06690 259 GPIFAVNKLLNEMNMKVEDIDYFEINE----AFASKVVACAKELQIPY--EKLNVNGGAIALGHPYGASGAMLVTRLFYQ 332 (361)
T ss_pred HHHHHHHHHHHHcCCCHHHcCEeeecc----hhHHHHHHHHHhcCCCc--hhcccCCcHHhccCchhhhHHHHHHHHHHH
Confidence 356899999999999999999996541 12334445667888863 234443 1367777777777777
Q ss_pred HHhc
Q 011007 237 LLQV 240 (496)
Q Consensus 237 lL~~ 240 (496)
+-+.
T Consensus 333 l~~~ 336 (361)
T PRK06690 333 AKRE 336 (361)
T ss_pred HHHh
Confidence 7553
No 182
>PRK05656 acetyl-CoA acetyltransferase; Provisional
Probab=81.32 E-value=3.3 Score=43.82 Aligned_cols=93 Identities=20% Similarity=0.238 Sum_probs=54.8
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCCceeeEecCCCcc-----hHHHHHHHHHHHHhc
Q 011007 166 IFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSNIKSFNLSGMGCS-----AGLISIDLARDLLQV 240 (496)
Q Consensus 166 a~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~~~~~dl~g~gCs-----g~l~al~lA~~lL~~ 240 (496)
...|++++|+++|++|+|||.+-++- ..+...-...+.||+.. ..+|++| |.. .+..++.+...++..
T Consensus 293 ~~~a~~~al~~agl~~~dId~~e~~d----~f~~~~~~~~e~lg~~~--~~vn~~G-g~~a~GHp~gAsG~~~~~~l~~~ 365 (393)
T PRK05656 293 PVSATRRCLDKAGWSLAELDLIEANE----AFAAQSLAVGKELGWDA--AKVNVNG-GAIALGHPIGASGCRVLVTLLHE 365 (393)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEecC----ccHHHHHHHHHHhCCCC--ccCCcCC-CHHHhCccHHHHHHHHHHHHHHH
Confidence 35899999999999999999986531 12344445677888742 2345543 222 233344444443331
Q ss_pred C---CCCEEEEEEECCCCCCCccCCCccccccccccccccEEEEEecc
Q 011007 241 H---PNSNAVVVSTEIITPNYYQGNERAMLLPNCLFRMGGAAILLSNR 285 (496)
Q Consensus 241 ~---~~~~aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAaA~lLs~~ 285 (496)
- ..++. +.+.|.-|-.++|+||+++
T Consensus 366 l~~~~~~~g--------------------l~~~c~~gG~g~a~~~e~~ 393 (393)
T PRK05656 366 MIRRDAKKG--------------------LATLCIGGGQGVALAIERD 393 (393)
T ss_pred HHHcCCCEE--------------------EEEEcccCcceEEEEEecC
Confidence 1 12232 3345666766888888763
No 183
>COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=81.13 E-value=5.8 Score=38.61 Aligned_cols=59 Identities=24% Similarity=0.262 Sum_probs=45.2
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCC-cHHHHHHHHcCCCCCceeeEecC
Q 011007 163 ELVIFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTP-SLSAMVINKYKLRSNIKSFNLSG 221 (496)
Q Consensus 163 ~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~P-s~a~~I~~~Lgl~~~~~~~dl~g 221 (496)
.+.....++++|+++|++++|||.|++++.|+..+- -+..-+++-|.+.-+++.+.++.
T Consensus 38 se~l~~~i~~ll~~~~~~~~dld~iav~~GPGSFTGlRIG~~~AkgLA~~l~iplvgvss 97 (220)
T COG1214 38 AERLMPMIDELLKEAGLSLQDLDAIAVAKGPGSFTGLRIGVAFAKGLALALNIPLVGVSS 97 (220)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEccCCCcccchhhHHHHHHHHHHHcCCCEEEeCH
Confidence 456778889999999999999999999999875554 34444555566655677888883
No 184
>PRK06633 acetyl-CoA acetyltransferase; Provisional
Probab=79.81 E-value=8 Score=41.02 Aligned_cols=51 Identities=10% Similarity=0.071 Sum_probs=32.0
Q ss_pred hccccEEEeccCCHHHHHHH--HHHcCCChhhHhhhhhhhcccCCccCCchHHHHH
Q 011007 382 KQAFEHFCIHAGGRAVIDEL--QKNLQLSAEHVEASRMTLHRFGNTSSSSLWYEMS 435 (496)
Q Consensus 382 ~~did~f~~H~~~~~v~~~i--~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La 435 (496)
++|||++=+|-.- .+..+ .+.|+++.+++.+| -..--+||.-.++=...+.
T Consensus 307 p~DID~~ei~daf--a~~~l~~~~~l~~~~~~vN~s-Gg~~a~GHplgAtG~~~~~ 359 (392)
T PRK06633 307 VNDLEVIEVNEAF--AAQSIYVNREMKWDMEKVNIN-GGAIAIGHPIGASGGRVLI 359 (392)
T ss_pred HHHcCeeehhhHH--HHHHHHHHhhhCCCccccCCC-CchHhhCCcHHHHHHHHHH
Confidence 3899999888443 23233 57788776666542 3455689998887333333
No 185
>PRK08257 acetyl-CoA acetyltransferase; Validated
Probab=79.77 E-value=5.9 Score=43.39 Aligned_cols=80 Identities=21% Similarity=0.257 Sum_probs=48.2
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCC-ceeeEecCCCcch--------HHHHHHHHHH
Q 011007 166 IFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSN-IKSFNLSGMGCSA--------GLISIDLARD 236 (496)
Q Consensus 166 a~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~-~~~~dl~g~gCsg--------~l~al~lA~~ 236 (496)
+..|++++++++|++++|||++=+..+ .|...-+-.+.||+.++ -..++++| |.-+ ++.++--+..
T Consensus 294 ~~~aa~~a~~~AGi~~~Did~~elydc----F~~~~~~~~E~LGl~~~g~~pvN~sG-Gl~s~G~P~~a~g~~~i~E~v~ 368 (498)
T PRK08257 294 IRAAGRRALALAGLGIDDIDAFDLYSC----FPSAVQVAARELGLDLDDPRPLTVTG-GLPFFGGPGNNYVTHAIAEMVE 368 (498)
T ss_pred HHHHHHHHHHHhCCCHHHCCEEEeccC----CHHHHHHHHHHcCcCCCCCCCcCCCc-ChhhcCCchhhHHHHHHHHHHH
Confidence 346999999999999999999854321 24444556688998743 23566654 4332 3444433333
Q ss_pred HHhcCCCCEEEEEE
Q 011007 237 LLQVHPNSNAVVVS 250 (496)
Q Consensus 237 lL~~~~~~~aLVVs 250 (496)
-|+..+.+++||.+
T Consensus 369 QLRg~~~~~gLv~~ 382 (498)
T PRK08257 369 RLRANPGRRGLVTA 382 (498)
T ss_pred HHhhcCCCEEEEEC
Confidence 44433455666543
No 186
>PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed
Probab=79.74 E-value=4.1 Score=43.09 Aligned_cols=70 Identities=27% Similarity=0.375 Sum_probs=42.9
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCC-ceeeEecC--------CCcchHHHHHHHHHH
Q 011007 166 IFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSN-IKSFNLSG--------MGCSAGLISIDLARD 236 (496)
Q Consensus 166 a~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~-~~~~dl~g--------~gCsg~l~al~lA~~ 236 (496)
...|++++|+++|++|+|||.+=++- ..+...-+-.+.||+.+. -..+|.+| .||+|....+.+++.
T Consensus 284 ~~~a~~~al~~Agl~~~DId~~El~d----~F~~~~l~~~e~lg~~~~~~~~vN~~GG~la~GhP~GAtG~~~v~~l~~~ 359 (387)
T PRK08947 284 PVPATQKALKRAGLSISDIDVFELNE----AFAAQSLPCLKDLGLLDKMDEKVNLNGGAIALGHPLGCSGARISTTLLNL 359 (387)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEecc----cchHHHHHHHHHcCCCCCCCCCcCCCCchhhcCCCccccHHHHHHHHHHH
Confidence 36788999999999999999885431 122334445567777321 02444443 256665555556655
Q ss_pred HHh
Q 011007 237 LLQ 239 (496)
Q Consensus 237 lL~ 239 (496)
|-+
T Consensus 360 L~~ 362 (387)
T PRK08947 360 MER 362 (387)
T ss_pred HHh
Confidence 543
No 187
>PRK08235 acetyl-CoA acetyltransferase; Provisional
Probab=79.50 E-value=5.9 Score=41.95 Aligned_cols=83 Identities=14% Similarity=0.092 Sum_probs=51.2
Q ss_pred hccccEEEeccCCHHHHHHHHHHcCCChhhHhhhhhhhcccCCccCCchHHHHHHHHHhCCCCCCCEEEE-EeechhHhh
Q 011007 382 KQAFEHFCIHAGGRAVIDELQKNLQLSAEHVEASRMTLHRFGNTSSSSLWYEMSYIEEKGRMKKGDRVWQ-IAFGSGFKC 460 (496)
Q Consensus 382 ~~did~f~~H~~~~~v~~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~i~~Gd~Vll-~~fG~G~~~ 460 (496)
++|||.+=+|-.-...--...+.||+.++.+.++ --.--+||...+|=...+.++..+=+-+.|++.+. +..|.| .-
T Consensus 308 ~~did~~e~~d~f~~~~l~~~e~lg~~~~pvN~~-GG~la~Ghp~gasG~~~~~~l~~qL~~~~~~~g~~~~c~~gG-~g 385 (393)
T PRK08235 308 VEDIDLFEINEAFAAVALASTEIAGIDPEKVNVN-GGAVALGHPIGASGARIIVTLIHELKRRGGGIGIAAICSGGG-QG 385 (393)
T ss_pred HHHCCeehhcchhHHHHHHHHHHhCCCcccCCcC-CchHHhCCcHHHHHHHHHHHHHHHHHhcCCCeEEEEEccccc-ce
Confidence 3899998888776666666788999988777532 23345788888776665555544312135565444 334444 34
Q ss_pred hheeeE
Q 011007 461 NSAVWK 466 (496)
Q Consensus 461 ~sav~r 466 (496)
.+++|+
T Consensus 386 ~a~~~e 391 (393)
T PRK08235 386 DAVLIE 391 (393)
T ss_pred EEEEEE
Confidence 555554
No 188
>cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes. They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues.
Probab=78.98 E-value=7.1 Score=39.50 Aligned_cols=92 Identities=14% Similarity=0.116 Sum_probs=59.4
Q ss_pred HHHhHHHHHHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCC-Cce------eeEecCCCcchHHHH
Q 011007 158 ARGEAELVIFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRS-NIK------SFNLSGMGCSAGLIS 230 (496)
Q Consensus 158 ~~~ea~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~-~~~------~~dl~g~gCsg~l~a 230 (496)
..+.+......+++++|+++|++ +|||.++...... +..-..+.++++++. .+. .-++++++|++...+
T Consensus 217 ~~~~~~~~~~~~~~~~l~~~~~~-~~i~~~~~h~~~~---~~~~~~~~~~l~~~~~~~~~~~~~~~~~~Gn~~sa~~~~~ 292 (324)
T cd00827 217 VFEAAHKLIAKVVRKALDRAGLS-EDIDYFVPHQPNG---KKILEAVAKKLGGPPEKASQTRWILLRRVGNMYAASILLG 292 (324)
T ss_pred hHHHHhHHHHHHHHHHHHHcccc-cccceeeccCchH---HHHHHHHHHHccchHhhhccchhhHHHHhCchHHHHHHHH
Confidence 34457778889999999999999 9999887543211 156677889999742 111 334566677777777
Q ss_pred HHHHHHHHhcCCCCEEEEEEECC
Q 011007 231 IDLARDLLQVHPNSNAVVVSTEI 253 (496)
Q Consensus 231 l~lA~~lL~~~~~~~aLVVs~E~ 253 (496)
|.-+-.--+-.+++++|+++.-.
T Consensus 293 L~~~~~~~~~~~Gd~vl~~~~G~ 315 (324)
T cd00827 293 LASLLESGKLKAGDRVLLFSYGS 315 (324)
T ss_pred HHHHHhcCCCCCCCEEEEEEecc
Confidence 66543211112467888777543
No 189
>TIGR01835 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade. This clade of hydroxymethylglutaryl-CoA (HMG-CoA) synthases is found in a limited spectrum of mostly gram-positive bacteria which make isopentenyl pyrophosphate (IPP) via the mevalonate pathway. This pathway is found primarily in eukaryotes and archaea, but the bacterial homologs are distinct, having aparrently diverged after being laterally transferred from an early eukaryote. HMG-CoA synthase is the first step in the pathway and joins acetyl-CoA with acetoacetyl-CoA with the release of one molecule of CoA. The Borellia sequence may have resulted from a separate lateral transfer event.
Probab=77.55 E-value=6.7 Score=41.30 Aligned_cols=73 Identities=11% Similarity=0.079 Sum_probs=46.1
Q ss_pred hHHHHHHHHHHHHHHHcCCCcCCcCEEEeecc-CCCCCCcHHHHHHHHcCCCCC-----------ceeeEecCCCcchHH
Q 011007 161 EAELVIFSAMDSLLQKTGLKPKDIDILIVNCS-LFSPTPSLSAMVINKYKLRSN-----------IKSFNLSGMGCSAGL 228 (496)
Q Consensus 161 ea~~la~~Aa~~aL~~agi~p~dID~LI~~ss-~~~~~Ps~a~~I~~~Lgl~~~-----------~~~~dl~g~gCsg~l 228 (496)
...+....+.++.|+++|++++|||.+++..- ......+. ..+.++++.+.+ ...=.+++++|++..
T Consensus 202 ~y~~~~~~~~~~~l~~~g~~~~did~~i~H~p~~~~~~k~~-~~~l~~~~~~~~~~~~~~~~~s~~~~~~~GN~~sas~~ 280 (379)
T TIGR01835 202 QYLNAFENAWNDYAKRTGLSLADFAAFCFHVPFTKMGLKAL-RHILKKNYEDEDESVQNAYLESIIYNREVGNLYTGSLY 280 (379)
T ss_pred HHHHHHHHHHHHHHHHhCCCHHHcCEEEECCCCCcHHHHHH-HHHHhhcccccHHHHHHHhhhhhhhhhhcCchHhHHHH
Confidence 34556678899999999999999999886542 11112222 235566665421 112367777777777
Q ss_pred HHHHHH
Q 011007 229 ISIDLA 234 (496)
Q Consensus 229 ~al~lA 234 (496)
.+|.-+
T Consensus 281 l~L~~~ 286 (379)
T TIGR01835 281 LGLASL 286 (379)
T ss_pred HHHHHH
Confidence 777543
No 190
>cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=76.80 E-value=5.1 Score=42.22 Aligned_cols=42 Identities=21% Similarity=0.359 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCC
Q 011007 166 IFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLR 211 (496)
Q Consensus 166 a~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~ 211 (496)
...|++++++++|++|+|||.+-.. .. .+...-+..+.||+.
T Consensus 287 ~~~a~~~a~~~Agi~~~did~~e~~-d~---f~~~~~~~~e~lg~~ 328 (386)
T cd00751 287 PVPAIPKALKRAGLTLDDIDLIEIN-EA---FAAQALACLKELGLD 328 (386)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEee-ch---hHHHHHHHHHHhCCC
Confidence 3589999999999999999988543 11 112334456778875
No 191
>PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed
Probab=75.53 E-value=15 Score=39.32 Aligned_cols=85 Identities=9% Similarity=-0.035 Sum_probs=48.0
Q ss_pred hccccEEEeccCCHHHHHHHHHHcC-----------------CChhhHhhhhhhhcccCCccCCchHHHHHHHHHhCCCC
Q 011007 382 KQAFEHFCIHAGGRAVIDELQKNLQ-----------------LSAEHVEASRMTLHRFGNTSSSSLWYEMSYIEEKGRMK 444 (496)
Q Consensus 382 ~~did~f~~H~~~~~v~~~i~~~Lg-----------------l~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~i~ 444 (496)
.+|||.+-+|-.-....-...+.|+ ++.+.+.++ --+--+||...++-...+.++..+=+-+
T Consensus 326 ~~DiD~~Ei~d~Fa~~~l~~~e~l~~~~~~~~~~g~~~~~G~~~~~pvN~~-GG~la~GhP~gasG~~~~~e~~~qLrg~ 404 (428)
T PRK08963 326 LADLTLIDMHEAFAAQTLANLQMFASERFAREKLGRSQAIGEVDMSKFNVL-GGSIAYGHPFAATGARMITQTLHELRRR 404 (428)
T ss_pred HHHCCEEEEccccHHHHHHHHHHhcCchhhhhcccccccCCCCCCCccCCC-CCHHhcCCCccccHHHHHHHHHHHHhhc
Confidence 3899999999886544333444442 333344321 1123478887777666666555432224
Q ss_pred CCCEEEEEeechhHhhhheeeEe
Q 011007 445 KGDRVWQIAFGSGFKCNSAVWKC 467 (496)
Q Consensus 445 ~Gd~Vll~~fG~G~~~~sav~r~ 467 (496)
.|++.+...-+.|-...+++++.
T Consensus 405 ~g~~gl~~~c~ggG~g~a~~ie~ 427 (428)
T PRK08963 405 GGGLGLTTACAAGGLGAAMVLEV 427 (428)
T ss_pred CCCEEEEEEccccChhhEEEEEe
Confidence 66776655555444456666653
No 192
>PRK09268 acetyl-CoA acetyltransferase; Provisional
Probab=74.65 E-value=12 Score=40.05 Aligned_cols=26 Identities=27% Similarity=0.390 Sum_probs=22.3
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEee
Q 011007 165 VIFSAMDSLLQKTGLKPKDIDILIVN 190 (496)
Q Consensus 165 la~~Aa~~aL~~agi~p~dID~LI~~ 190 (496)
....|++++++++|++|+|||++=++
T Consensus 310 ~~~~a~~~a~~~AGl~~~Did~~Ei~ 335 (427)
T PRK09268 310 APAYAVPRLLARNGLTLQDFDFYEIH 335 (427)
T ss_pred cHHHHHHHHHHHcCCCHHHCCEEEec
Confidence 34579999999999999999999654
No 193
>PF02801 Ketoacyl-synt_C: Beta-ketoacyl synthase, C-terminal domain; InterPro: IPR014031 Beta-ketoacyl-ACP synthase 2.3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the C-terminal domain of beta-ketoacyl-ACP synthases. The active site is contained in a cleft betweeen N- and C-terminal domains, with residues from both domains contributing to substrate binding and catalysis [].; PDB: 2UV8_B 3HMJ_A 2VKZ_C 4EWG_A 1TQY_H 1E5M_A 1J3N_B 2VZ8_A 2VZ9_B 3O04_A ....
Probab=73.51 E-value=1.4 Score=38.37 Aligned_cols=76 Identities=17% Similarity=0.214 Sum_probs=43.8
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEee-ccCCCCCCcHHHHHHHHcCCCC---Cceee----EecCCCcchHHHHHHHHHHH
Q 011007 166 IFSAMDSLLQKTGLKPKDIDILIVN-CSLFSPTPSLSAMVINKYKLRS---NIKSF----NLSGMGCSAGLISIDLARDL 237 (496)
Q Consensus 166 a~~Aa~~aL~~agi~p~dID~LI~~-ss~~~~~Ps~a~~I~~~Lgl~~---~~~~~----dl~g~gCsg~l~al~lA~~l 237 (496)
..++++++|+++|++|+|||.|... +++..-.+.-+.-+.+-|+-.. .+..- .++....++++.++-.+--.
T Consensus 27 ~~~~i~~al~~agi~~~~I~~i~~hg~Gt~~~D~~E~~ai~~~~~~~~~~~~~~v~s~K~~~Gh~~~asG~~~l~~~~l~ 106 (119)
T PF02801_consen 27 LARAIRRALADAGISPEDIDYIEAHGTGTPLGDAAEAEAIARVFGDSARQQPVPVGSVKSNIGHTEAASGLLSLAKALLA 106 (119)
T ss_dssp HHHHHHHHHHHHTS-GGGEEEEE----SSHHHHHHHHHHHHHHHGGGGGTSTSEEE-THHHH-B-GGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhccccccceeeeeeccccccchhhhhhhhhhhhcccccccccceeccccccccccccchHHHHHHHHHH
Confidence 4788999999999999999998744 4433233455556666666431 12222 23334556666666666665
Q ss_pred HhcC
Q 011007 238 LQVH 241 (496)
Q Consensus 238 L~~~ 241 (496)
|+.+
T Consensus 107 l~~~ 110 (119)
T PF02801_consen 107 LEHG 110 (119)
T ss_dssp HHHT
T ss_pred HhcC
Confidence 5544
No 194
>TIGR02445 fadA fatty oxidation complex, beta subunit FadA. This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (TIGR02437). The FadBA complex is the major complex active for beta-oxidation of fatty acids in E. coli.
Probab=73.12 E-value=35 Score=36.00 Aligned_cols=82 Identities=15% Similarity=0.024 Sum_probs=47.1
Q ss_pred hccccEEEeccCCHHHHHHHHHHcCCCh---hhHhhhhhhhcccCCccCCc---hHHHHHHHHHhCCCCCCCEEEEEeec
Q 011007 382 KQAFEHFCIHAGGRAVIDELQKNLQLSA---EHVEASRMTLHRFGNTSSSS---LWYEMSYIEEKGRMKKGDRVWQIAFG 455 (496)
Q Consensus 382 ~~did~f~~H~~~~~v~~~i~~~Lgl~~---e~~~~S~~~l~r~GNtsSaS---i~~~La~~~~~g~i~~Gd~Vll~~fG 455 (496)
++|||.+=+|-.-...--...+.||+-+ +++.++= -+--+||...+| +...|.+.+.+ +.+.+.+....|
T Consensus 297 p~DId~~Ei~daFa~~~l~~~e~lg~~~~g~~~vN~~G-G~la~GhP~GATG~r~v~~l~~~l~~---~~~~~Gl~~~~~ 372 (385)
T TIGR02445 297 ISDIDVFELNEAFAAQALPCLKDLGLLDKMDEKVNLNG-GAIALGHPLGCSGARISTTLLNLMEQ---KDATFGLATMCI 372 (385)
T ss_pred HHHcCEEEEccccHHHHHHHHHHcCCCCCCCCCcCCCC-chhhcCCCccccHHHHHHHHHHHHHh---cCCCeEEEEEec
Confidence 3899999999988777777788999843 4554321 223366665554 44444444432 233444444344
Q ss_pred hhHhhhheeeEe
Q 011007 456 SGFKCNSAVWKC 467 (496)
Q Consensus 456 ~G~~~~sav~r~ 467 (496)
.|-.-.+++++.
T Consensus 373 g~g~g~a~~~e~ 384 (385)
T TIGR02445 373 GLGQGIATVFER 384 (385)
T ss_pred ccChhheEEEEe
Confidence 333345566653
No 195
>PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=72.18 E-value=17 Score=38.36 Aligned_cols=45 Identities=22% Similarity=0.211 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEee-ccCCCCCCcHHHHHHHHcCC
Q 011007 166 IFSAMDSLLQKTGLKPKDIDILIVN-CSLFSPTPSLSAMVINKYKL 210 (496)
Q Consensus 166 a~~Aa~~aL~~agi~p~dID~LI~~-ss~~~~~Ps~a~~I~~~Lgl 210 (496)
...|++++|+++|++|+|||.+... +++..-.+.-+..|.+.+|-
T Consensus 262 ~~~a~~~Al~~Agl~~~dId~v~~hgtgt~~~D~~E~~al~~~f~~ 307 (392)
T PRK09185 262 AILAMQQALADAGLAPADIGYINLHGTATPLNDAMESRAVAAVFGD 307 (392)
T ss_pred HHHHHHHHHHHcCCCHHHccEEEeCCCCCcCCCHHHHHHHHHHhCC
Confidence 3579999999999999999998644 44433335555667777763
No 196
>cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism. The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein.
Probab=71.89 E-value=16 Score=38.07 Aligned_cols=44 Identities=14% Similarity=0.169 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCC
Q 011007 165 VIFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRS 212 (496)
Q Consensus 165 la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~ 212 (496)
-...|++++|+++|++++|||.+=++.. .+...-+..+.||+.+
T Consensus 252 ~~~~a~~~al~~Agl~~~did~~ei~d~----F~~~~l~~~e~lGl~~ 295 (375)
T cd00829 252 AARLAARRAYKMAGITPDDIDVAELYDC----FTIAELLALEDLGFCE 295 (375)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEecCc----ChHHHHHHHHHcCCCC
Confidence 3468999999999999999999854421 2344455667777764
No 197
>TIGR03725 bact_YeaZ universal bacterial protein YeaZ. This family describes a protein family, YeaZ, that appears to be universal in bacteria, but whose function is unknown. This family is related to the gcp (glycoprotease) protein family, also universal in bacteria and unknown in function. In Gram-positive lineages, members of these two related families often belong to the same operon, along with the ribosomal-protein-alanine acetyltransferase gene. Members of this family may occur as fusions with gcp or the ribosomal protein N-acetyltransferase rimI, and is frequently encoded next to rimI.
Probab=71.88 E-value=6.8 Score=37.41 Aligned_cols=55 Identities=20% Similarity=0.240 Sum_probs=39.9
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCC-----cHHHHHHHHcCCCCCceeeEec
Q 011007 162 AELVIFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTP-----SLSAMVINKYKLRSNIKSFNLS 220 (496)
Q Consensus 162 a~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~P-----s~a~~I~~~Lgl~~~~~~~dl~ 220 (496)
-.+.....++++|+++|++++|||.+.++..|+..+. +.+..++..+ +++.+.++
T Consensus 33 h~~~l~~~i~~~l~~~~~~~~~i~~iav~~GPGSfTGlRig~~~akgla~~~----~~p~~~vs 92 (202)
T TIGR03725 33 HSEILLPMIEELLAEAGLSLQDLDAIAVGVGPGSFTGLRIGLATAKGLALAL----GIPLVGVS 92 (202)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEecCCChHHhHHHHHHHHHHHHHHh----CCCEEecC
Confidence 4566778999999999999999999999999876555 3333344333 34566666
No 198
>TIGR00329 gcp_kae1 metallohydrolase, glycoprotease/Kae1 family. This subfamily includes the well-studied secreted O-sialoglycoprotein endopeptidase (glycoprotease, EC 3.4.24.57) of Pasteurella haemolytica, a pathogen. A member from Riemerella anatipestifer, associated with cohemolysin activity, likewise is exported without benefit of a classical signal peptide and shows glycoprotease activity on the test substrate glycophorin. However, archaeal members of this subfamily show unrelated activities as demonstrated in Pyrococcus abyssi: DNA binding, iron binding, apurinic endonuclease activity, genomic association with a kinase domain, and no glycoprotease activity. This family thus pulls together a set of proteins as a homology group that appears to be near-universal in life, yet heterogeneous in assayed function between bacteria and archaea.
Probab=71.79 E-value=14 Score=37.74 Aligned_cols=36 Identities=11% Similarity=0.069 Sum_probs=30.4
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCC
Q 011007 163 ELVIFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTP 198 (496)
Q Consensus 163 ~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~P 198 (496)
.+.....++++|+++|++++|||.+.++..|+..+.
T Consensus 49 ~~~l~~~i~~~l~~~~~~~~did~iav~~GPG~~tg 84 (305)
T TIGR00329 49 AENIPPLLERALIESNVDKSEIDLIAYTQGPGLGGS 84 (305)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEecCCCchhh
Confidence 456677889999999999999999999998875444
No 199
>PRK09604 UGMP family protein; Validated
Probab=71.46 E-value=18 Score=37.44 Aligned_cols=49 Identities=18% Similarity=0.168 Sum_probs=36.4
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCC-----cHHHHHHHHcCC
Q 011007 162 AELVIFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTP-----SLSAMVINKYKL 210 (496)
Q Consensus 162 a~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~P-----s~a~~I~~~Lgl 210 (496)
-.+.....++++|+++|++++|||.+.++..|+..+. +.|..++..++.
T Consensus 51 H~~~l~~~i~~~L~~~~~~~~did~iavt~GPG~~tglrvg~~~Ak~La~~~~i 104 (332)
T PRK09604 51 HVENIVPLIEEALKEAGLTLEDIDAIAVTAGPGLVGALLVGVSFAKALALALNK 104 (332)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEecCCCcHHhHHHHHHHHHHHHHHhCC
Confidence 3566788899999999999999999999988865333 334445555554
No 200
>PRK06064 acetyl-CoA acetyltransferase; Provisional
Probab=71.22 E-value=15 Score=38.76 Aligned_cols=41 Identities=22% Similarity=0.396 Sum_probs=29.6
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEee-ccCCCCCCcHHHHHHHHcCCC
Q 011007 166 IFSAMDSLLQKTGLKPKDIDILIVN-CSLFSPTPSLSAMVINKYKLR 211 (496)
Q Consensus 166 a~~Aa~~aL~~agi~p~dID~LI~~-ss~~~~~Ps~a~~I~~~Lgl~ 211 (496)
...|++++|+++|++|+|||.+-.. +.+ ...-+..+.||+.
T Consensus 260 ~~~a~~~al~~aGi~~~did~~e~~d~ft-----~~~~~~~e~lgl~ 301 (389)
T PRK06064 260 AVVAAEKAYKMAGIEPKDIDVAEVHDCFT-----IAEILAYEDLGFA 301 (389)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEecCCCc-----HHHHHHHHHcCCC
Confidence 3478999999999999999998543 322 2344566777763
No 201
>PLN02644 acetyl-CoA C-acetyltransferase
Probab=70.84 E-value=9.1 Score=40.53 Aligned_cols=66 Identities=23% Similarity=0.323 Sum_probs=40.8
Q ss_pred HHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCCceeeEecC--------CCcchHHHHHHHHHHHH
Q 011007 167 FSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSNIKSFNLSG--------MGCSAGLISIDLARDLL 238 (496)
Q Consensus 167 ~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~~~~~dl~g--------~gCsg~l~al~lA~~lL 238 (496)
..+++++|+++|++|+|||.+=++- ..+...-+..+.||+.+ ..+|.+| .|++|....++++.+|-
T Consensus 294 ~~a~~~al~~Agi~~~Did~~Ei~d----~f~~~~l~~~e~lg~~~--~~vN~~GG~l~~Ghp~gasG~~~~~~~~~~l~ 367 (394)
T PLN02644 294 ALAIPKALKHAGLEASQVDYYEINE----AFSVVALANQKLLGLDP--EKVNVHGGAVSLGHPIGCSGARILVTLLGVLR 367 (394)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEeCc----HHHHHHHHHHHHhCCCc--cccCCCCChHhhCCCHHHHHHHHHHHHHHHHH
Confidence 4699999999999999999986431 11233344566777642 2334332 24555555566666654
No 202
>PRK12578 acetyl-CoA acetyltransferase; Provisional
Probab=69.68 E-value=36 Score=35.72 Aligned_cols=57 Identities=12% Similarity=-0.014 Sum_probs=37.6
Q ss_pred hccccEEEeccCCHHHHHHHHHHcCCChh------------------hHhhhhhhhcccCCccCCchHHHHHHHHH
Q 011007 382 KQAFEHFCIHAGGRAVIDELQKNLQLSAE------------------HVEASRMTLHRFGNTSSSSLWYEMSYIEE 439 (496)
Q Consensus 382 ~~did~f~~H~~~~~v~~~i~~~Lgl~~e------------------~~~~S~~~l~r~GNtsSaSi~~~La~~~~ 439 (496)
++|||.+-+|-.....--...+.||+.+. .+.+| --+--+||...++-...+.++..
T Consensus 274 ~~DiD~~ei~d~ft~~~l~~le~lGl~~~G~~~~~~~~G~~~~~G~~pvN~~-GG~la~GhP~gatG~~~v~e~~~ 348 (385)
T PRK12578 274 PNDIEVATVHDAFTIAEIMGYEDLGFTEKGKGGKFIEEGQSEKGGKVGVNLF-GGLKAKGHPLGATGLSMIYEITK 348 (385)
T ss_pred HHHCCEEEecCcChHHHHHHHHHcCCCCCCchHHHHHCCCccCCCCeeeCCC-CCcccCCCCccHHHHHHHHHHHH
Confidence 38999999999988777777889999762 22211 11223788776665555555433
No 203
>PRK07516 acetyl-CoA acetyltransferase; Provisional
Probab=69.08 E-value=11 Score=39.71 Aligned_cols=70 Identities=16% Similarity=0.110 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCC----------------ceeeEecC--------
Q 011007 166 IFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSN----------------IKSFNLSG-------- 221 (496)
Q Consensus 166 a~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~----------------~~~~dl~g-------- 221 (496)
...|++++++++|++|+|||++-+.- ..+...-+..+.||+.+. -..+|.+|
T Consensus 262 ~~~a~~~a~~~agl~~~did~~e~~d----~f~~~~~~~~e~lg~~~~G~~~~~~~~g~~~~~g~~pvN~sGG~la~Ghp 337 (389)
T PRK07516 262 PRRAWQRALAQAGVTLDDLSFVETHD----CFTIAELIEYEAMGLAPPGQGARAIREGWTAKDGKLPVNPSGGLKAKGHP 337 (389)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEec----CCCHHHHHHHHHcCCCCCCchHHHHHCCCccCCCCeeecCCCCcccCCCC
Confidence 45799999999999999999985441 122333455566666531 11345433
Q ss_pred CCcchHHHHHHHHHHHHh
Q 011007 222 MGCSAGLISIDLARDLLQ 239 (496)
Q Consensus 222 ~gCsg~l~al~lA~~lL~ 239 (496)
.||+|.......+.+|..
T Consensus 338 ~gasG~~~~~e~~~QL~g 355 (389)
T PRK07516 338 IGATGVSMHVLAAMQLTG 355 (389)
T ss_pred ccHHHHHHHHHHHHHhcC
Confidence 245566666677777654
No 204
>PRK06059 lipid-transfer protein; Provisional
Probab=68.99 E-value=25 Score=37.16 Aligned_cols=41 Identities=17% Similarity=0.180 Sum_probs=27.8
Q ss_pred HHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCC
Q 011007 167 FSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLR 211 (496)
Q Consensus 167 ~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~ 211 (496)
..|++++++++|++|+|||++=+.-. | ....-...+.||+.
T Consensus 276 ~~a~~~a~~~agl~~~Did~~El~d~-f---~~~~l~~~e~lGl~ 316 (399)
T PRK06059 276 DQILDAAYAEAGIGPEDLSLAEVYDL-S---TALELDWYEHLGLC 316 (399)
T ss_pred HHHHHHHHHHcCCCHHHCcEEeeccc-C---hHHHHHHHHHcCCC
Confidence 46899999999999999999854421 1 11222234677765
No 205
>PRK08256 lipid-transfer protein; Provisional
Probab=68.44 E-value=17 Score=38.43 Aligned_cols=43 Identities=16% Similarity=0.266 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCC
Q 011007 166 IFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRS 212 (496)
Q Consensus 166 a~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~ 212 (496)
...|++++++++|++++|||.+-+.- ..+...-+..+.||+.+
T Consensus 266 ~~~a~~~a~~~ag~~~~DiD~~ei~d----~f~~~~l~~le~lg~~~ 308 (391)
T PRK08256 266 TRAAAQQVYEQAGIGPEDIDVVELHD----CFSANELLTYEALGLCP 308 (391)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEeecc----CCcHHHHHHHHHcCCCC
Confidence 35799999999999999999986441 12233344556677653
No 206
>cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II. KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP.
Probab=68.30 E-value=9.6 Score=39.95 Aligned_cols=77 Identities=18% Similarity=0.120 Sum_probs=49.0
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEee-ccCCCCCCcHHHHHHHHcCCCC-Cce----eeEecCCCcchHHHHHHHHHHHH
Q 011007 165 VIFSAMDSLLQKTGLKPKDIDILIVN-CSLFSPTPSLSAMVINKYKLRS-NIK----SFNLSGMGCSAGLISIDLARDLL 238 (496)
Q Consensus 165 la~~Aa~~aL~~agi~p~dID~LI~~-ss~~~~~Ps~a~~I~~~Lgl~~-~~~----~~dl~g~gCsg~l~al~lA~~lL 238 (496)
-...+++++|+++|++++|||.+... +++..-.+.-+..+.+-++-+. .+. .-.++...+++|+..+-.+...|
T Consensus 276 ~~~~~i~~al~~agi~~~dId~v~~h~tgt~~~d~~E~~al~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l 355 (406)
T cd00834 276 GAARAMRAALADAGLSPEDIDYINAHGTSTPLNDAAESKAIKRVFGEHAKKVPVSSTKSMTGHLLGAAGAVEAIATLLAL 355 (406)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEecccccCccccHHHHHHHHHHhcccCCCCceeCcchhhccchhhhhHHHHHHHHHHH
Confidence 35678999999999999999998755 5544444555556666666521 111 11223345666666666666666
Q ss_pred hcC
Q 011007 239 QVH 241 (496)
Q Consensus 239 ~~~ 241 (496)
+.+
T Consensus 356 ~~~ 358 (406)
T cd00834 356 RDG 358 (406)
T ss_pred hcC
Confidence 655
No 207
>PRK08131 acetyl-CoA acetyltransferase; Provisional
Probab=67.31 E-value=13 Score=39.47 Aligned_cols=70 Identities=23% Similarity=0.329 Sum_probs=43.2
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEee-ccCCCCCCcHHHHHHHHcCCCCCceeeEecC--------CCcchHHHHHHHHHH
Q 011007 166 IFSAMDSLLQKTGLKPKDIDILIVN-CSLFSPTPSLSAMVINKYKLRSNIKSFNLSG--------MGCSAGLISIDLARD 236 (496)
Q Consensus 166 a~~Aa~~aL~~agi~p~dID~LI~~-ss~~~~~Ps~a~~I~~~Lgl~~~~~~~dl~g--------~gCsg~l~al~lA~~ 236 (496)
...|++++|+++|++|+|||++-++ +- ....-...+.||+..+-..+|.+| .|++|....++++.+
T Consensus 298 ~~~a~~~a~~~agl~~~did~~ei~d~F-----a~~~l~~~e~lg~~~~~~~vN~~GG~la~GhP~gAtG~~~~~el~~q 372 (401)
T PRK08131 298 PVEAIKKALARAGLTLDDMDIIEINEAF-----ASQVLGCLKGLGVDFDDPRVNPNGGAIAVGHPLGASGARLALTAARE 372 (401)
T ss_pred HHHHHHHHHHHcCCCHHHCCeehhccHH-----HHHHHHHHHHcCCCCCCCCccCCccHHhcCCchhhhHHHHHHHHHHH
Confidence 4689999999999999999998543 11 111223446777742223455554 245555666666666
Q ss_pred HHhc
Q 011007 237 LLQV 240 (496)
Q Consensus 237 lL~~ 240 (496)
|-..
T Consensus 373 L~~~ 376 (401)
T PRK08131 373 LQRR 376 (401)
T ss_pred HHhc
Confidence 6543
No 208
>PRK14878 UGMP family protein; Provisional
Probab=66.92 E-value=12 Score=38.61 Aligned_cols=51 Identities=22% Similarity=0.242 Sum_probs=36.3
Q ss_pred HHhHHHHHHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCC-----cHHHHHHHHcCC
Q 011007 159 RGEAELVIFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTP-----SLSAMVINKYKL 210 (496)
Q Consensus 159 ~~ea~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~P-----s~a~~I~~~Lgl 210 (496)
|...+.+. .+++++|+++|++++|||.+.++..|...+. +.|..++..++.
T Consensus 42 ~~h~~~l~-~~i~~~l~~a~~~~~did~Iavt~gPG~~~~lrvg~~~Ak~la~~~~~ 97 (323)
T PRK14878 42 QHHAEVAP-ELLRKALEKAGISIEDIDAVAVSQGPGLGPALRVGATAARALALKYNK 97 (323)
T ss_pred HHHHHHHH-HHHHHHHHHcCCCHHHCCEEEEecCCCcccchHHHHHHHHHHHHHhCC
Confidence 33444444 8999999999999999999999988764433 224445555554
No 209
>PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=65.04 E-value=12 Score=39.64 Aligned_cols=45 Identities=20% Similarity=0.264 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEee-ccCCCCCCcHHHHHHHHcCC
Q 011007 166 IFSAMDSLLQKTGLKPKDIDILIVN-CSLFSPTPSLSAMVINKYKL 210 (496)
Q Consensus 166 a~~Aa~~aL~~agi~p~dID~LI~~-ss~~~~~Ps~a~~I~~~Lgl 210 (496)
...|++++|+++|++|+|||.+-.. +++..-.+.-...+.+-+|.
T Consensus 278 ~~~a~~~Al~~agi~~~dId~v~~hgtgt~~~d~~E~~al~~~~~~ 323 (411)
T PRK07314 278 AARAMKLALKDAGINPEDIDYINAHGTSTPAGDKAETQAIKRVFGE 323 (411)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEccccCCccccHHHHHHHHHHhcc
Confidence 4578999999999999999998643 55444444445566666763
No 210
>PF00814 Peptidase_M22: Glycoprotease family; InterPro: IPR000905 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to MEROPS peptidase family M22 (clan MK). The type example being O-sialoglycoprotein endopeptidase (3.4.24.57 from EC) from Pasteurella haemolytica (Mannheimia haemolytica). O-Sialoglycoprotein endopeptidase is secreted by the bacterium P. haemolytica, and digests only proteins that are heavily sialylated, in particular those with sialylated serine and threonine residues []. Substrate proteins include glycophorin A and leukocyte surface antigens CD34, CD43, CD44 and CD45 [, ]. Removal of glycosylation, by treatment with neuraminidase, completely negates susceptibility to O-sialoglycoprotein endopeptidase digestion [, ]. Sequence similarity searches have revealed other members of the M22 family, from yeast, Mycobacterium, Haemophilus influenzae and the cyanobacterium Synechocystis []. The zinc-binding and catalytic residues of this family have not been determined, although the motif HMEGH may be a zinc-binding region [].; GO: 0004222 metalloendopeptidase activity, 0006508 proteolysis; PDB: 2A6A_A 2GEL_G 2GEM_B 1OKJ_B 3ENO_A 3EN9_B 2VWB_B 3ENH_B 2IVO_D 2IVP_A ....
Probab=64.89 E-value=10 Score=37.95 Aligned_cols=54 Identities=22% Similarity=0.202 Sum_probs=36.6
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCC-----cHHHHHHHHcCCCCCceeeEec
Q 011007 163 ELVIFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTP-----SLSAMVINKYKLRSNIKSFNLS 220 (496)
Q Consensus 163 ~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~P-----s~a~~I~~~Lgl~~~~~~~dl~ 220 (496)
.+.....++++|++++++++|||.+.++..|+..++ +.|-.++..++ ++.+.++
T Consensus 30 ~~~L~~~i~~~l~~~~~~~~did~iavt~GPGsftgLrvG~~~Ak~La~~~~----~Pli~v~ 88 (268)
T PF00814_consen 30 SENLPPLIEELLKEAGISLSDIDAIAVTRGPGSFTGLRVGLSFAKGLALALN----IPLIGVS 88 (268)
T ss_dssp HHHHHHHHHHHHHHHTS-GGGESEEEEEEESS-HHHHHHHHHHHHHHHHHTT------EEEEE
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEecCCCcccccHHHHHHHHHHHHHhC----CCeEeec
Confidence 445568899999999999999999999999876544 33333444444 4566666
No 211
>TIGR03150 fabF beta-ketoacyl-acyl-carrier-protein synthase II. FabB sequences should fall well below the noise cutoff of this model.
Probab=64.88 E-value=12 Score=39.37 Aligned_cols=45 Identities=18% Similarity=0.241 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEee-ccCCCCCCcHHHHHHHHcCC
Q 011007 166 IFSAMDSLLQKTGLKPKDIDILIVN-CSLFSPTPSLSAMVINKYKL 210 (496)
Q Consensus 166 a~~Aa~~aL~~agi~p~dID~LI~~-ss~~~~~Ps~a~~I~~~Lgl 210 (496)
...|++++|+++|++|+|||.+... +++..-.+.-...+.+.+|-
T Consensus 277 ~~~ai~~Al~~Agi~~~dId~ve~h~tgt~~~D~~E~~a~~~~~~~ 322 (407)
T TIGR03150 277 AARAMRAALKDAGINPEDVDYINAHGTSTPLGDKAETKAIKRVFGD 322 (407)
T ss_pred HHHHHHHHHHHcCCCHhHCCEEeCcCCCCCCCCHHHHHHHHHHhcc
Confidence 4688999999999999999998644 55444445555667777764
No 212
>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2.1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....
Probab=64.72 E-value=9.3 Score=36.87 Aligned_cols=41 Identities=29% Similarity=0.359 Sum_probs=28.8
Q ss_pred cCCccCCchHHHHHHHHHhCCCCCCCEEEEEeechhHhhhh
Q 011007 422 FGNTSSSSLWYEMSYIEEKGRMKKGDRVWQIAFGSGFKCNS 462 (496)
Q Consensus 422 ~GNtsSaSi~~~La~~~~~g~i~~Gd~Vll~~fG~G~~~~s 462 (496)
.|+-.+.|.|...+.+++.=.+++||+|+=+|-|+|+..+.
T Consensus 49 i~~~~~is~P~~~a~~l~~L~l~pg~~VLeIGtGsGY~aAl 89 (209)
T PF01135_consen 49 IGCGQTISAPSMVARMLEALDLKPGDRVLEIGTGSGYQAAL 89 (209)
T ss_dssp EETTEEE--HHHHHHHHHHTTC-TT-EEEEES-TTSHHHHH
T ss_pred ecceeechHHHHHHHHHHHHhcCCCCEEEEecCCCcHHHHH
Confidence 45556677788888888877799999999999999986543
No 213
>cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=64.26 E-value=16 Score=38.66 Aligned_cols=70 Identities=21% Similarity=0.255 Sum_probs=45.3
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCC----------------ceeeEecC--------
Q 011007 166 IFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSN----------------IKSFNLSG-------- 221 (496)
Q Consensus 166 a~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~----------------~~~~dl~g-------- 221 (496)
...|++++|+++|++|+|||++-++- ..+...-+..+.||+.+. -..+|.+|
T Consensus 271 ~~~A~~~al~~Agi~~~DID~~Ei~d----~Fa~~~l~~~e~lgl~~~g~~~~~~~~g~~~~~G~~pvN~~GG~la~GhP 346 (393)
T cd00826 271 PIEAARKALEKAGLGIGDLDLIEAHD----AFAANACATNEALGLCPEGQGGALVDRGDNTYGGKSIINPNGGAIAIGHP 346 (393)
T ss_pred HHHHHHHHHHHcCCCHHHcCeeehhh----hhHHHHHHHHHHhCCCcccchhhhhhcCccccCCcceECCCCchhhcCCC
Confidence 46899999999999999999885441 112333445566666421 12455443
Q ss_pred CCcchHHHHHHHHHHHHh
Q 011007 222 MGCSAGLISIDLARDLLQ 239 (496)
Q Consensus 222 ~gCsg~l~al~lA~~lL~ 239 (496)
.||+|....++++.+|-.
T Consensus 347 ~gAtG~~~~~e~~~qL~g 364 (393)
T cd00826 347 IGASGAAICAELCFELKG 364 (393)
T ss_pred ccccHHHHHHHHHHHHhh
Confidence 366677777777777754
No 214
>PRK14691 3-oxoacyl-(acyl carrier protein) synthase II; Provisional
Probab=63.04 E-value=20 Score=37.20 Aligned_cols=46 Identities=15% Similarity=0.164 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEe-eccCCCCCCcHHHHHHHHcCC
Q 011007 165 VIFSAMDSLLQKTGLKPKDIDILIV-NCSLFSPTPSLSAMVINKYKL 210 (496)
Q Consensus 165 la~~Aa~~aL~~agi~p~dID~LI~-~ss~~~~~Ps~a~~I~~~Lgl 210 (496)
-...|++++|+++|++|+|||.+-. .|++..-.+.-+..|.+-||-
T Consensus 207 ~~~~ai~~AL~~Agl~p~dIdyIeaHgtgT~~~D~~E~~Ai~~~fg~ 253 (342)
T PRK14691 207 GAYRAMKIALRQAGITPEQVQHLNAHATSTPVGDLGEINAIKHLFGE 253 (342)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEecCCCCcCCCHHHHHHHHHHhCC
Confidence 4678999999999999999998753 355544456667778887774
No 215
>cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases.They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues.
Probab=62.74 E-value=14 Score=38.79 Aligned_cols=46 Identities=22% Similarity=0.201 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEee-ccCCCCCCcHHHHHHHHcC
Q 011007 164 LVIFSAMDSLLQKTGLKPKDIDILIVN-CSLFSPTPSLSAMVINKYK 209 (496)
Q Consensus 164 ~la~~Aa~~aL~~agi~p~dID~LI~~-ss~~~~~Ps~a~~I~~~Lg 209 (496)
.-...|++++|+++|++|+|||.+... +++..-.+.-+..+.+-+|
T Consensus 274 ~~~~~a~~~Al~~Agi~~~dId~i~~hgtgt~~~D~~E~~ai~~~~~ 320 (407)
T cd00828 274 KGIARAIRTALAKAGLSLDDLDVISAHGTSTPANDVAESRAIAEVAG 320 (407)
T ss_pred HHHHHHHHHHHHHcCCCHHHcCEEecccccCccccHHHHHHHHHHHh
Confidence 345789999999999999999988644 5544334444555555555
No 216
>PRK08170 acetyl-CoA acetyltransferase; Provisional
Probab=62.45 E-value=16 Score=39.07 Aligned_cols=25 Identities=36% Similarity=0.542 Sum_probs=22.1
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEee
Q 011007 166 IFSAMDSLLQKTGLKPKDIDILIVN 190 (496)
Q Consensus 166 a~~Aa~~aL~~agi~p~dID~LI~~ 190 (496)
...|++++|+++|++|+|||++-++
T Consensus 309 ~~~a~~~al~~aGl~~~did~~ei~ 333 (426)
T PRK08170 309 PVHAATPLLQRHGLTLEDLDLWEIN 333 (426)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEec
Confidence 4579999999999999999998654
No 217
>PRK07937 lipid-transfer protein; Provisional
Probab=61.62 E-value=30 Score=36.14 Aligned_cols=77 Identities=14% Similarity=0.096 Sum_probs=45.4
Q ss_pred HHHHHHHHH-cCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCCceeeEecCC-------CcchHHHHHHHHHHHHh
Q 011007 168 SAMDSLLQK-TGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSNIKSFNLSGM-------GCSAGLISIDLARDLLQ 239 (496)
Q Consensus 168 ~Aa~~aL~~-agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~~~~~dl~g~-------gCsg~l~al~lA~~lL~ 239 (496)
.++++++++ +|++|+|||++=+. ...+...-+..+.||+..+ ..+|.+|- ||+|...-++++.+|..
T Consensus 250 ~~~~~a~~~aAgi~~~diD~~Ei~----D~F~~~~l~~~e~lGl~g~-~pvN~~GG~l~ghp~gatG~~~~~e~~~QL~g 324 (352)
T PRK07937 250 PSTALAAEAATGGDAGGVDVAELH----APFTHQELILREALGLGDK-TKVNPSGGALAANPMFAAGLERIGEAARHIWD 324 (352)
T ss_pred HHHHHHHHHhcCCCHHHCCEEEEe----CCChHHHHHHHHHcCCCCC-CCcCCCccchhcCchhHHHHHHHHHHHHHHhc
Confidence 444556666 59999999998543 1123444556788998533 35666652 45555555566666543
Q ss_pred cCCCCEEEEEE
Q 011007 240 VHPNSNAVVVS 250 (496)
Q Consensus 240 ~~~~~~aLVVs 250 (496)
. ..+++|+.+
T Consensus 325 ~-~a~~~l~~~ 334 (352)
T PRK07937 325 G-SARRALAHA 334 (352)
T ss_pred c-CCCEEEEec
Confidence 3 245666543
No 218
>TIGR03723 bact_gcp putative glycoprotease GCP. This model represents bacterial members of a protein family that is widely distributed. In a few pathogenic species, the protein is exported in a way that may represent an exceptional secondary function. This model plus companion (archaeal) model TIGR03722 together span the prokaryotic member sequences of TIGR00329, a protein family that appears universal in life, and whose broad function is unknown. A member of TIGR03722 has been characterized as a DNA-binding protein with apurinic endopeptidase activity. In contrast, the rare characterized members of the present family show O-sialoglycoprotein endopeptidase (EC. 3.4.24.57) activity after export. These include glycoprotease (gcp) from Pasteurella haemolytica A1 and a cohemolysin from Riemerella anatipestifer (GB|AAG39646.1). The member from Staphylococcus aureus is essential and is related to cell wall dynamics and the modulation of autolysis, but members are also found in the Mycoplasmas
Probab=61.50 E-value=28 Score=35.72 Aligned_cols=56 Identities=16% Similarity=0.111 Sum_probs=40.0
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCC-----cHHHHHHHHcCCCCCceeeEecC
Q 011007 162 AELVIFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTP-----SLSAMVINKYKLRSNIKSFNLSG 221 (496)
Q Consensus 162 a~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~P-----s~a~~I~~~Lgl~~~~~~~dl~g 221 (496)
-.+.....++++|++++++++|||.+.++..|+..+. +.|.-++..++ ++.+.++.
T Consensus 49 H~~~l~~~i~~~l~~~~~~~~~id~iav~~GPGsftglrig~~~Ak~la~~~~----~p~~~v~h 109 (314)
T TIGR03723 49 HLEAIPPLIEEALAEAGLTLSDIDAIAVTAGPGLIGALLVGVSFAKALALALN----KPLIGVNH 109 (314)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEecCCChHHhHHHHHHHHHHHHHHhC----CCEEeccc
Confidence 4556778889999999999999999999998875443 33444444444 44555654
No 219
>PTZ00455 3-ketoacyl-CoA thiolase; Provisional
Probab=61.48 E-value=24 Score=38.05 Aligned_cols=43 Identities=16% Similarity=0.200 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCC
Q 011007 166 IFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRS 212 (496)
Q Consensus 166 a~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~ 212 (496)
+..|++++++++|++|+|||++=++- ..+...-+..+.||+.+
T Consensus 311 ~~~A~~~a~~~AGl~~~DiD~~Ei~d----aFa~~~l~~~e~lGl~~ 353 (438)
T PTZ00455 311 SRAAAQKALSMAGVKPSDLQVAEVHD----CFTIAELLMYEALGIAE 353 (438)
T ss_pred HHHHHHHHHHHcCCCHHHCcEeeecc----cChHHHHHHHHHcCCCC
Confidence 47899999999999999999985441 12233445566777653
No 220
>PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=60.80 E-value=27 Score=37.12 Aligned_cols=71 Identities=17% Similarity=0.126 Sum_probs=43.0
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEee-ccCCCCCCcHHHHHHHHcCCCC-CceeeEecCCCcchHHHHHHHHHHHHh
Q 011007 165 VIFSAMDSLLQKTGLKPKDIDILIVN-CSLFSPTPSLSAMVINKYKLRS-NIKSFNLSGMGCSAGLISIDLARDLLQ 239 (496)
Q Consensus 165 la~~Aa~~aL~~agi~p~dID~LI~~-ss~~~~~Ps~a~~I~~~Lgl~~-~~~~~dl~g~gCsg~l~al~lA~~lL~ 239 (496)
-..+|.+++|+++|+ |+|||.|... |++..-...-+..|.+.++.+- .+++ +-| -|-+..-++.++...+.
T Consensus 281 ~~~~am~~AL~~Agl-~~~IdyI~ahgtgT~~~D~~E~~Ai~~~f~~pvsS~Ks--~~G-H~l~AAGa~e~i~~~la 353 (398)
T PRK06519 281 DLEASLERLLKPAGG-LAAPTAVISGATGAHPATAEEKAALEAALAGPVRGIGT--LFG-HTMEAQFPLGLALAALS 353 (398)
T ss_pred HHHHHHHHHHHHCCC-cccCCEEEeCCCCCCCccHHHHHHHHHHcCCCccccch--hhc-cchHHHHHHHHHHHHHH
Confidence 357899999999999 8999998643 5554434555666777777431 1222 222 34333334555555444
No 221
>smart00825 PKS_KS Beta-ketoacyl synthase. The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains.
Probab=59.71 E-value=27 Score=36.89 Aligned_cols=46 Identities=13% Similarity=0.198 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEee-ccCCCCCCcHHHHHHHHcCC
Q 011007 165 VIFSAMDSLLQKTGLKPKDIDILIVN-CSLFSPTPSLSAMVINKYKL 210 (496)
Q Consensus 165 la~~Aa~~aL~~agi~p~dID~LI~~-ss~~~~~Ps~a~~I~~~Lgl 210 (496)
....|++++|+++|++|+|||.+... +++..-...-...+.+-+|.
T Consensus 280 ~~~~a~~~al~~Agl~~~dId~i~~h~tgt~~~d~~E~~al~~~~~~ 326 (424)
T smart00825 280 AQARLIRQALARAGVDPADVDYVEAHGTGTPLGDPIEAEALAAVFGQ 326 (424)
T ss_pred HHHHHHHHHHHHhCCCHHHccEEEeeCCCCCCCCHHHHHHHHHHHhc
Confidence 45679999999999999999998754 54432223334456666654
No 222
>PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional
Probab=59.48 E-value=28 Score=37.09 Aligned_cols=46 Identities=11% Similarity=0.042 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHH-cCCCcCCcCEEEee-ccCCCCCCcHHHHHHHHcCC
Q 011007 165 VIFSAMDSLLQK-TGLKPKDIDILIVN-CSLFSPTPSLSAMVINKYKL 210 (496)
Q Consensus 165 la~~Aa~~aL~~-agi~p~dID~LI~~-ss~~~~~Ps~a~~I~~~Lgl 210 (496)
-...|++++|++ +|++|+|||.+-.. |++..-.+.-...+.+-+|-
T Consensus 284 ~~~~ai~~Al~~~Agi~~~dId~ie~hgtgt~~~D~~E~~al~~~~~~ 331 (421)
T PTZ00050 284 GARRCMENALKDGANININDVDYVNAHATSTPIGDKIELKAIKKVFGD 331 (421)
T ss_pred HHHHHHHHHHHhccCCChhhCCEEECCCccCCCCCHHHHHHHHHHhcc
Confidence 356899999999 99999999998644 55433334444556777764
No 223
>TIGR03722 arch_KAE1 universal archaeal protein Kae1. This family represents the archaeal protein Kae1. Its partner Bud32 is fused with it in about half of the known archaeal genomes. The pair, which appears universal in the archaea, corresponds to EKC/KEOPS complex in eukaryotes. A recent characterization of the member from Pyrococcus abyssi, as an iron-binding, atypical DNA-binding protein with an apurinic lyase activity, challenges the common annotation of close homologs as O-sialoglycoprotein endopeptidase. The latter annotation is based on a characterized protein from the bacterium Pasteurella haemolytica.
Probab=59.20 E-value=17 Score=37.43 Aligned_cols=36 Identities=19% Similarity=0.219 Sum_probs=28.0
Q ss_pred HHhHHHHHHHHHHHHHHHcCCCcCCcCEEEeeccCCC
Q 011007 159 RGEAELVIFSAMDSLLQKTGLKPKDIDILIVNCSLFS 195 (496)
Q Consensus 159 ~~ea~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~ 195 (496)
|+..+.+. .+++++|+++|++++|||.|.++..|..
T Consensus 43 ~~H~~~l~-~~i~~~l~~~~~~~~did~Iavt~gPg~ 78 (322)
T TIGR03722 43 EHHAEVAP-KLIKEALEEAGVSLEDIDAVAFSQGPGL 78 (322)
T ss_pred HHHHHHHH-HHHHHHHHHcCCCHHHCCEEEEecCCch
Confidence 33444444 4499999999999999999999887753
No 224
>PRK07855 lipid-transfer protein; Provisional
Probab=59.14 E-value=39 Score=35.69 Aligned_cols=24 Identities=33% Similarity=0.429 Sum_probs=21.1
Q ss_pred HHHHHHHHHHcCCCcCCcCEEEee
Q 011007 167 FSAMDSLLQKTGLKPKDIDILIVN 190 (496)
Q Consensus 167 ~~Aa~~aL~~agi~p~dID~LI~~ 190 (496)
..|++++++++|++|+|||++=+.
T Consensus 269 ~~aa~~a~~~AGi~~~DiDv~El~ 292 (386)
T PRK07855 269 GLVARQLWAQSGLGPADIDTAILY 292 (386)
T ss_pred HHHHHHHHHHcCCCHHHCcEEEec
Confidence 479999999999999999998543
No 225
>COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=59.14 E-value=19 Score=38.46 Aligned_cols=74 Identities=20% Similarity=0.264 Sum_probs=46.5
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEE-eeccCCCCCCcHHHHHHHHcCCCC-C--c-eeeEecCCCcchHHHHHHHHHHHHhc
Q 011007 166 IFSAMDSLLQKTGLKPKDIDILI-VNCSLFSPTPSLSAMVINKYKLRS-N--I-KSFNLSGMGCSAGLISIDLARDLLQV 240 (496)
Q Consensus 166 a~~Aa~~aL~~agi~p~dID~LI-~~ss~~~~~Ps~a~~I~~~Lgl~~-~--~-~~~dl~g~gCsg~l~al~lA~~lL~~ 240 (496)
+..|.+.+|+++|++|+|||.|- +.||+..-...-+..|.+-+|=.. + + -.-.+.| -|-|..-+++.+..++.-
T Consensus 278 a~~am~~AL~~Agl~~~~idYinaHgTsT~~nD~~E~~ai~~vfg~~~~~~~vsstKs~tG-H~lGAaGaveai~~~l~l 356 (412)
T COG0304 278 AIRAMRAALADAGLTPEDIDYINAHGTSTPANDKAESLAIKRVFGEHAKSLPVSSTKSLTG-HTLGAAGAVEAIISLLAL 356 (412)
T ss_pred HHHHHHHHHHHcCCCHhHCCEEeCCCccCCCccHHHHHHHHHHhcccccCceeeecccccc-cChhhHHHHHHHHHHHHH
Confidence 56899999999999999999997 446766555556666766677221 1 0 1223333 444444455555555543
No 226
>PRK06289 acetyl-CoA acetyltransferase; Provisional
Probab=58.97 E-value=43 Score=35.50 Aligned_cols=43 Identities=16% Similarity=0.167 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCC
Q 011007 166 IFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRS 212 (496)
Q Consensus 166 a~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~ 212 (496)
...|++++++++|++|+|||++-+.- ..+...-+..+.||+.+
T Consensus 278 ~~~aa~~a~~~Agi~~~Didv~el~D----~fa~~~l~~le~lGl~~ 320 (403)
T PRK06289 278 VRQAVLDAYRRAGVGLDDLDGFEVHD----CFTPSEYLAIDHIGLTG 320 (403)
T ss_pred HHHHHHHHHHHcCCCHHHCeEEeeec----cchHHHHHHHHHcCCCC
Confidence 45799999999999999999986441 12334455667777753
No 227
>PRK06158 thiolase; Provisional
Probab=58.21 E-value=36 Score=35.80 Aligned_cols=41 Identities=15% Similarity=0.221 Sum_probs=28.3
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEee-ccCCCCCCcHHHHHHHHcCCC
Q 011007 166 IFSAMDSLLQKTGLKPKDIDILIVN-CSLFSPTPSLSAMVINKYKLR 211 (496)
Q Consensus 166 a~~Aa~~aL~~agi~p~dID~LI~~-ss~~~~~Ps~a~~I~~~Lgl~ 211 (496)
...|++++++++|++|+|||.+=+. |- +...-+..+.||+.
T Consensus 256 ~~~aa~~A~~~AGi~p~DId~~ElyD~F-----s~~~l~~~E~lG~~ 297 (384)
T PRK06158 256 AAESGPRAFAMAGLTPADIDVVELYDAF-----TINTILFLEDLGFC 297 (384)
T ss_pred HHHHHHHHHHHcCCCHHHCcEEEecCCc-----hHHHHHHHHHcCCC
Confidence 4579999999999999999998433 31 22233344566654
No 228
>TIGR01796 CM_mono_aroH monofunctional chorismate mutase, gram positive type, clade 1. This model represents a family of monofunctional (non-fused) chorismate mutases from gram positive bacteria (Firmicutes) and cyanobacteria. Trusted members of the family are found in operons with other enzymes of the chorismate pathways, both up- and downstream of CM (Listeria, Bacillus, Oceanobacillus) or are the sole CM in the genome where the other members of the chorismate pathways are found elsewhere in the genome (Nostoc, Thermosynechococcus).
Probab=57.27 E-value=21 Score=31.17 Aligned_cols=54 Identities=11% Similarity=0.212 Sum_probs=39.2
Q ss_pred HHHHHHHHcCCCcCCcCEEEeeccCC--CCCCcHHHHHHHHc-CCCCCceeeEecCCCcch
Q 011007 169 AMDSLLQKTGLKPKDIDILIVNCSLF--SPTPSLSAMVINKY-KLRSNIKSFNLSGMGCSA 226 (496)
Q Consensus 169 Aa~~aL~~agi~p~dID~LI~~ss~~--~~~Ps~a~~I~~~L-gl~~~~~~~dl~g~gCsg 226 (496)
-.++.+++.+++++||--++|+.++| ...|+ ..++++ |+. +++-++...|.=-|
T Consensus 25 Ll~~ii~~N~l~~edivSv~FT~T~DL~a~FPA---~aaR~~~Gw~-~Vplmc~qEm~V~g 81 (117)
T TIGR01796 25 LLTELMERNELTPEDLISVIFTVTEDLHADFPA---AAARGLPGWT-DVPVMCAQEIPVEG 81 (117)
T ss_pred HHHHHHHHcCCCHHHEEEEEEEecCcccccChH---HHHHhccCCC-CcceeccCcCCCCC
Confidence 34566688999999999999887765 44664 455666 887 78888777655444
No 229
>PLN02787 3-oxoacyl-[acyl-carrier-protein] synthase II
Probab=57.08 E-value=29 Score=38.46 Aligned_cols=45 Identities=9% Similarity=0.184 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEe-eccCCCCCCcHHHHHHHHcCC
Q 011007 166 IFSAMDSLLQKTGLKPKDIDILIV-NCSLFSPTPSLSAMVINKYKL 210 (496)
Q Consensus 166 a~~Aa~~aL~~agi~p~dID~LI~-~ss~~~~~Ps~a~~I~~~Lgl 210 (496)
...|.+++|+++|++|+|||.|-. .|++..-.+.-...|.+-+|-
T Consensus 407 ~~~am~~AL~~AGl~p~dIdyInaHGTGT~~gD~~E~~Ai~~~Fg~ 452 (540)
T PLN02787 407 VILCIEKALAQSGVSKEDVNYINAHATSTKAGDLKEYQALMRCFGQ 452 (540)
T ss_pred HHHHHHHHHHHcCCCHHHCcEEEccCccCCCCCHHHHHHHHHHhCC
Confidence 468899999999999999998753 355443334455667777774
No 230
>PLN03170 chalcone synthase; Provisional
Probab=57.00 E-value=24 Score=37.52 Aligned_cols=71 Identities=14% Similarity=0.135 Sum_probs=48.9
Q ss_pred hHHHHHHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCCcee------eEecCCCcchHHHHHHHH
Q 011007 161 EAELVIFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSNIKS------FNLSGMGCSAGLISIDLA 234 (496)
Q Consensus 161 ea~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~~~~------~dl~g~gCsg~l~al~lA 234 (496)
-+.+.....++++|+++|+.++|||..++.-. -+.+-..+.++||++++-.. -+.+||+.++.+.+|+-.
T Consensus 278 ~~~~~i~~~v~~~L~~~gl~~~di~~~v~Hqg----g~~il~~v~~~Lgl~~~~~~~s~~~l~~~GNtsSasv~~vL~~~ 353 (401)
T PLN03170 278 LISKNIERSLEEAFKPLGITDYNSIFWVAHPG----GPAILDQVEAKVGLEKERMRATRHVLSEYGNMSSACVLFILDEM 353 (401)
T ss_pred HHHHHHHHHHHHHHHhcCCCccccCeEEecCC----cHHHHHHHHHHcCCChHHHHHHHHHHHHhCccHHhHHHHHHHHH
Confidence 35566667888999999999999998764422 34566678999999864321 245556666666676655
Q ss_pred H
Q 011007 235 R 235 (496)
Q Consensus 235 ~ 235 (496)
.
T Consensus 354 ~ 354 (401)
T PLN03170 354 R 354 (401)
T ss_pred H
Confidence 3
No 231
>TIGR02446 FadI fatty oxidation complex, beta subunit FadI. This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (TIGR02440). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in E. coli.
Probab=56.76 E-value=57 Score=35.04 Aligned_cols=57 Identities=5% Similarity=-0.079 Sum_probs=33.0
Q ss_pred hccccEEEeccCCHHHHHHHHHHcC-----------------CChhhHhhhhhhhcccCCccCCchHHHHHHHHH
Q 011007 382 KQAFEHFCIHAGGRAVIDELQKNLQ-----------------LSAEHVEASRMTLHRFGNTSSSSLWYEMSYIEE 439 (496)
Q Consensus 382 ~~did~f~~H~~~~~v~~~i~~~Lg-----------------l~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~ 439 (496)
.+|||.+-+|-.-....-...+.|| ++.+++.+| --+--+||...++=...+.++..
T Consensus 328 ~~Did~~Ei~daFa~~~l~~~e~lg~~~~~~~~~g~~~~~G~~~~~pvN~~-GG~la~GhP~gatG~~~v~e~~~ 401 (430)
T TIGR02446 328 LSDLTLIDMHEAFAAQTLANVQMFASDKFAQENLGRSKAMGEIDMSKFNVL-GGSIAYGHPFAATGARMITQTLR 401 (430)
T ss_pred HHHCCEEEeccccHHHHHHHHHHhcCcchhhhcccccccCCCCCCCccCCC-CCHHhcCCCccccHHHHHHHHHH
Confidence 3899999999886555444455554 443344321 11223788887765555554443
No 232
>COG4126 Hydantoin racemase [Amino acid transport and metabolism]
Probab=56.55 E-value=80 Score=30.82 Aligned_cols=101 Identities=18% Similarity=0.307 Sum_probs=69.1
Q ss_pred CcchHHHHHHHHHHcCCCceeecCCCCcCCCCCCchHHHHHhHHHHHHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCc
Q 011007 120 NPKSVEFQMRILERSGLGEETCLPPAIHYIPPTPTMEAARGEAELVIFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPS 199 (496)
Q Consensus 120 ~~~~~~f~~~i~~~sGi~~r~~~~~~~~~~~~~~~~~~~~~ea~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps 199 (496)
++++..-++.+.++.|+.+.+..-.... . +-..++.-.++++.+....+++++++- .-|+++..|.... +
T Consensus 118 t~rs~~il~~lv~~~g~s~~~~~vrstd-l-~vL~l~~~~~~~~~~l~~~~~~a~~ed-----gAeaIiLGCAGms---~ 187 (230)
T COG4126 118 TERSRPILEELVRSYGLSRHCRSVRSTD-L-PVLALEGPPEEAEALLVIEAAEALKED-----GAEAIILGCAGMS---D 187 (230)
T ss_pred CcccHHHHHHHHHhcCccccccceeeCC-C-CcccccCChHHHHHHHHHHHHHHhhhc-----CCCEEEEcCccHH---H
Confidence 4566666677888899988775311110 0 123444455678888888888888764 4688999987543 5
Q ss_pred HHHHHHHHcCCCCCceeeEecCCCcchHHHHHHHHHHHHhcC
Q 011007 200 LSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLLQVH 241 (496)
Q Consensus 200 ~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL~~~ 241 (496)
++.+++..+|++ . +.| -..|+.+|-.|++.+
T Consensus 188 la~~Lq~~~gvP----V--IDg-----v~Aav~~a~~L~~~~ 218 (230)
T COG4126 188 LADQLQKAFGVP----V--IDG-----VAAAVKLAEGLLGMG 218 (230)
T ss_pred HHHHHHHHhCCC----c--ccc-----hHHHHHHHHHHHhhc
Confidence 689999999976 1 343 566788888888765
No 233
>COG0533 QRI7 Metal-dependent proteases with possible chaperone activity [Posttranslational modification, protein turnover, chaperones]
Probab=55.28 E-value=59 Score=33.78 Aligned_cols=84 Identities=19% Similarity=0.133 Sum_probs=49.6
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcH--HHHHHHHcCCCCCceeeEecCCCcchHHHHHHHHHHHHhcC
Q 011007 164 LVIFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSL--SAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLLQVH 241 (496)
Q Consensus 164 ~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~--a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL~~~ 241 (496)
+-.....+++|+++|++.+|||+|=++..|+- .+++ -...++.|-+.-+.+-+-++ -|-|=+.+-.+.... .
T Consensus 52 e~i~~li~~al~eA~~~~~dID~IA~T~gPGL-~gaL~VG~~~Ak~LA~a~~kPli~Vn--H~~gHi~a~~l~~~~---~ 125 (342)
T COG0533 52 ENIPPLIEEALAEAGVSLEDIDAIAVTAGPGL-GGALLVGATAAKALALALNKPLIPVN--HLEGHIEAARLETGL---A 125 (342)
T ss_pred HHHHHHHHHHHHHcCCCcccCCEEEEecCCCc-hhHHHHHHHHHHHHHHHhCCCEeecc--hHHHHHHHHHhccCC---C
Confidence 44567789999999999999999988777763 2222 22333333333345677777 455544333222221 1
Q ss_pred CCCEEEEEEECC
Q 011007 242 PNSNAVVVSTEI 253 (496)
Q Consensus 242 ~~~~aLVVs~E~ 253 (496)
..--+|+||+-.
T Consensus 126 ~p~v~LlVSGGH 137 (342)
T COG0533 126 FPPVALLVSGGH 137 (342)
T ss_pred CCcEEEEEecCc
Confidence 124567777655
No 234
>PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=55.11 E-value=22 Score=37.49 Aligned_cols=45 Identities=18% Similarity=0.325 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEee-ccCCCCCCcHHHHHHHHcC
Q 011007 165 VIFSAMDSLLQKTGLKPKDIDILIVN-CSLFSPTPSLSAMVINKYK 209 (496)
Q Consensus 165 la~~Aa~~aL~~agi~p~dID~LI~~-ss~~~~~Ps~a~~I~~~Lg 209 (496)
....|++++|+++|++|+|||.+-.. |++..-.+.-...|.+-+|
T Consensus 255 ~~~~ai~~Al~~agi~p~dId~i~~hgtgt~~~D~~E~~al~~~fg 300 (381)
T PRK05952 255 SAIAAIQQCLARSGLTPEDIDYIHAHGTATRLNDQREANLIQALFP 300 (381)
T ss_pred HHHHHHHHHHHHhCCCHHHeeEEEccCCCCCCCcHHHHHHHHHHcC
Confidence 46789999999999999999998643 5544334444555666666
No 235
>PRK06365 acetyl-CoA acetyltransferase; Provisional
Probab=54.98 E-value=57 Score=34.99 Aligned_cols=41 Identities=15% Similarity=0.146 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHcCCC--cCCcCEEEee-ccCCCCCCcHHHHHHHHcCCC
Q 011007 166 IFSAMDSLLQKTGLK--PKDIDILIVN-CSLFSPTPSLSAMVINKYKLR 211 (496)
Q Consensus 166 a~~Aa~~aL~~agi~--p~dID~LI~~-ss~~~~~Ps~a~~I~~~Lgl~ 211 (496)
...|++++++++|++ ++|||++-+. |- +...-+..+.||+.
T Consensus 295 ~~~a~~~a~~~AGl~~~~~DiD~~Ei~D~F-----a~~~l~~lE~lGl~ 338 (430)
T PRK06365 295 GRMAAKEAYEMAGITDPLNDLDLIELHDAY-----TSSEIQTYEDLGLC 338 (430)
T ss_pred HHHHHHHHHHHcCCCCCHHHCCEEEeecCC-----cHHHHHHHHHcCCC
Confidence 458999999999997 7999998544 31 22223445566654
No 236
>cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria. CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine.
Probab=54.84 E-value=24 Score=37.29 Aligned_cols=46 Identities=17% Similarity=0.299 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEee-ccCCCCCCcHHHHHHHHcCC
Q 011007 165 VIFSAMDSLLQKTGLKPKDIDILIVN-CSLFSPTPSLSAMVINKYKL 210 (496)
Q Consensus 165 la~~Aa~~aL~~agi~p~dID~LI~~-ss~~~~~Ps~a~~I~~~Lgl 210 (496)
-...|.+++|+++|++|+|||.|... |++..-.+.-+..|.+-||-
T Consensus 271 ~~~~a~~~al~~ag~~~~~i~~v~~hgtgt~~~D~~E~~al~~~fg~ 317 (399)
T cd00832 271 GLARAIRLALADAGLTPEDVDVVFADAAGVPELDRAEAAALAAVFGP 317 (399)
T ss_pred HHHHHHHHHHHHcCCCHHHccEEEeccCcCCCCCHHHHHHHHHHhCC
Confidence 35688999999999999999987643 55544455556667777774
No 237
>PF02803 Thiolase_C: Thiolase, C-terminal domain; InterPro: IPR020617 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2.3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 2WUA_B 4E1L_B 3SVK_A 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2IB8_B 2IBU_A 2IB9_C ....
Probab=54.11 E-value=19 Score=31.77 Aligned_cols=83 Identities=17% Similarity=0.145 Sum_probs=49.3
Q ss_pred hccccEEEeccCCHHHHHHHHHHcCCChhhHhhhhhhhcccCCccCCchHHHHHHHHHhCCCCCCCEEEE-EeechhHhh
Q 011007 382 KQAFEHFCIHAGGRAVIDELQKNLQLSAEHVEASRMTLHRFGNTSSSSLWYEMSYIEEKGRMKKGDRVWQ-IAFGSGFKC 460 (496)
Q Consensus 382 ~~did~f~~H~~~~~v~~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~i~~Gd~Vll-~~fG~G~~~ 460 (496)
.+|||.|=+|-.-....-...+.||++++++.++=-.+ -+||-..+|=...+.++..+=+-+.|++.+. +..|.|. -
T Consensus 39 ~~did~~Ei~EaFA~~~l~~~~~lg~~~~~vN~~GG~l-a~GHP~gasG~r~~~~l~~~L~~~~~~~gla~~~~ggG~-g 116 (123)
T PF02803_consen 39 PDDIDVIEINEAFAAQVLAFLEALGLDPEKVNPNGGAL-ALGHPLGASGARLVVELAHQLRRRGGRYGLAAICAGGGQ-G 116 (123)
T ss_dssp GGGESEEEE--SBHHHHHHHHHHHTTGGGGBSTT--HH-HH-BHTTTHHHHHHHHHHHHHHHHTTSEEEEEEEETTTE-E
T ss_pred ccccchhhccchhhhHHHHhhccccccccccCcccccc-cccccccccccchhhhhHHHHHHhchhhhhHHhccccee-e
Confidence 48999999999998888889999999999986532222 3788877765444444333211134566554 3344443 3
Q ss_pred hheeeE
Q 011007 461 NSAVWK 466 (496)
Q Consensus 461 ~sav~r 466 (496)
.+++++
T Consensus 117 ~a~lle 122 (123)
T PF02803_consen 117 SAVLLE 122 (123)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 444444
No 238
>KOG2708 consensus Predicted metalloprotease with chaperone activity (RNAse H/HSP70 fold) [Posttranslational modification, protein turnover, chaperones]
Probab=54.09 E-value=32 Score=33.73 Aligned_cols=86 Identities=21% Similarity=0.237 Sum_probs=55.4
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCC-cHHHHHHHHcCCCCCceeeEecCCCcchHHHHHHHHHHHHhcCC
Q 011007 164 LVIFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTP-SLSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLLQVHP 242 (496)
Q Consensus 164 ~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~P-s~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL~~~~ 242 (496)
+-...-++++|++++++++|||.+-+.-.|+.-.| +..+.+++-+.+=-+.+-..++ .|-|- |++.+ ++....
T Consensus 51 ~~il~Lv~~al~ea~v~~~diD~icyTKGPGmgaPL~~vaivaRtlsllw~kPlv~VN--HCigH---IEMGR-~iTgA~ 124 (336)
T KOG2708|consen 51 AWILGLVKQALEEAGVTSDDIDCICYTKGPGMGAPLSVVAIVARTLSLLWNKPLVGVN--HCIGH---IEMGR-EITGAQ 124 (336)
T ss_pred HHHHHHHHHHHHHcCCChhhCCEEEEcCCCCCCCchhhHHHHHHHHHHHhCCCcccch--hhhhh---hhhcc-eeccCC
Confidence 34556678899999999999999988777876666 3334455555533355666666 67653 33332 232234
Q ss_pred CCEEEEEEECCCC
Q 011007 243 NSNAVVVSTEIIT 255 (496)
Q Consensus 243 ~~~aLVVs~E~~s 255 (496)
+-.+|-||+-+..
T Consensus 125 nPvvLYvSGGNTQ 137 (336)
T KOG2708|consen 125 NPVVLYVSGGNTQ 137 (336)
T ss_pred CCEEEEEeCCceE
Confidence 5688888887743
No 239
>PLN03173 chalcone synthase; Provisional
Probab=53.68 E-value=32 Score=36.47 Aligned_cols=71 Identities=14% Similarity=0.158 Sum_probs=47.4
Q ss_pred hHHHHHHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCCcee-----e-EecCCCcchHHHHHHHH
Q 011007 161 EAELVIFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSNIKS-----F-NLSGMGCSAGLISIDLA 234 (496)
Q Consensus 161 ea~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~~~~-----~-dl~g~gCsg~l~al~lA 234 (496)
-+....-..++++|+++|++++|||..++... .+.+-..++++||++++-.. + +.+||+.++.+.+|+-+
T Consensus 274 ~~~~~~~~~i~~~L~~~gl~~~di~~~v~Hqg----g~~Il~~v~~~LgL~~ekl~~s~~vl~~yGNtSSaSv~~vL~~~ 349 (391)
T PLN03173 274 LISKNVEKSLTEAFKPLGISDWNSLFWIAHPG----GPAILDQVEAKLALKPEKLRATRHVLSEYGNMSSACVLFILDEM 349 (391)
T ss_pred HHHHHHHHHHHHHHHhcCCCccccCeEEECCC----cHHHHHHHHHHcCCChHHHHHHHHHHHHhCcchhhHHHHHHHHH
Confidence 35666777888999999999999999765421 24566779999999865332 2 33444555555555544
Q ss_pred H
Q 011007 235 R 235 (496)
Q Consensus 235 ~ 235 (496)
.
T Consensus 350 ~ 350 (391)
T PLN03173 350 R 350 (391)
T ss_pred H
Confidence 3
No 240
>PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=53.47 E-value=34 Score=36.54 Aligned_cols=44 Identities=18% Similarity=0.200 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEee-ccCCCCCCcHHHHHHHHcC
Q 011007 166 IFSAMDSLLQKTGLKPKDIDILIVN-CSLFSPTPSLSAMVINKYK 209 (496)
Q Consensus 166 a~~Aa~~aL~~agi~p~dID~LI~~-ss~~~~~Ps~a~~I~~~Lg 209 (496)
...|++++|+++|++|+|||.+... +++....+.-...|.+.+|
T Consensus 291 ~~~ai~~AL~~agi~p~dId~i~~Hgtgt~~~d~~E~~al~~~~~ 335 (425)
T PRK06501 291 AIGAIRAALADAGLTPEQIDYINAHGTSTPENDKMEYLGLSAVFG 335 (425)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEecCccCcchHHHHHHHHHHHhc
Confidence 5688999999999999999998754 5443334444455666665
No 241
>PRK08313 acetyl-CoA acetyltransferase; Provisional
Probab=53.39 E-value=61 Score=34.18 Aligned_cols=42 Identities=14% Similarity=0.177 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHHcCCC--cCCcCEEEee-ccCCCCCCcHHHHHHHHcCCC
Q 011007 165 VIFSAMDSLLQKTGLK--PKDIDILIVN-CSLFSPTPSLSAMVINKYKLR 211 (496)
Q Consensus 165 la~~Aa~~aL~~agi~--p~dID~LI~~-ss~~~~~Ps~a~~I~~~Lgl~ 211 (496)
....|++++++++|++ ++|||++=+. |- +...-+..+.||+.
T Consensus 256 ~~~~a~~~a~~~Agi~~p~~Did~~el~d~F-----~~~~~~~~e~lGl~ 300 (386)
T PRK08313 256 AGRDAAAALWKAAGITDPRDEIDVAEIYVPF-----SWFEPMWLENLGFA 300 (386)
T ss_pred HHHHHHHHHHHHcCCCCChhhCCEEEeccCC-----hHHHHHHHHHcCCC
Confidence 3457999999999997 6999988433 31 22233445566654
No 242
>PRK06333 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=53.12 E-value=58 Score=34.54 Aligned_cols=45 Identities=18% Similarity=0.139 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEee-ccCCCCCCcHHHHHHHHcC
Q 011007 165 VIFSAMDSLLQKTGLKPKDIDILIVN-CSLFSPTPSLSAMVINKYK 209 (496)
Q Consensus 165 la~~Aa~~aL~~agi~p~dID~LI~~-ss~~~~~Ps~a~~I~~~Lg 209 (496)
-...|++++|+++|++|+|||.+-.. |++..-.+.-...+.+.+|
T Consensus 289 ~~~~a~~~Al~~Agi~p~dId~i~~hgtgt~~~D~~E~~al~~~fg 334 (424)
T PRK06333 289 GARRAMLIALRQAGIPPEEVQHLNAHATSTPVGDLGEVAAIKKVFG 334 (424)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEeccCCCCccchHHHHHHHHHHhC
Confidence 35788999999999999999998533 5443334455566777777
No 243
>PTZ00340 O-sialoglycoprotein endopeptidase-like protein; Provisional
Probab=52.36 E-value=53 Score=34.25 Aligned_cols=55 Identities=13% Similarity=0.152 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCC-----cHHHHHHHHcCCCCCceeeEecC
Q 011007 163 ELVIFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTP-----SLSAMVINKYKLRSNIKSFNLSG 221 (496)
Q Consensus 163 ~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~P-----s~a~~I~~~Lgl~~~~~~~dl~g 221 (496)
.+.....++++|+++|++++|||.|.++..|+..+. +.|--++..++ ++.+.++.
T Consensus 50 ~~~l~~~i~~~l~~a~~~~~did~Iavt~GPGl~~~LrVG~~~Ak~LA~a~~----~PligV~H 109 (345)
T PTZ00340 50 REHILSLVKEALEEAKITPSDISLICYTKGPGMGAPLSVGAVVARTLSLLWG----KPLVGVNH 109 (345)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEecCCCcHhhHHHHHHHHHHHHHHcC----CCEeecch
Confidence 344567789999999999999999988888763221 22333444444 45666663
No 244
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=51.68 E-value=27 Score=38.39 Aligned_cols=84 Identities=17% Similarity=0.157 Sum_probs=50.0
Q ss_pred HHHhHHHHHHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCC-----cHHHHHHHHcCCCCCceeeEecCCCcchHHHHHH
Q 011007 158 ARGEAELVIFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTP-----SLSAMVINKYKLRSNIKSFNLSGMGCSAGLISID 232 (496)
Q Consensus 158 ~~~ea~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~P-----s~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~ 232 (496)
.+...+.+. .+++++|+++|++++|||.|.++..|+..+. +.|..++..++. +.+.++.+-|-+
T Consensus 45 ~~~H~~~l~-~~i~~~l~~~~~~~~~id~iav~~gPg~~~~l~vg~~~ak~la~~~~~----~~~~v~h~~aH~------ 113 (535)
T PRK09605 45 AEHHAEAIP-KVIKEALEEAGLKPEDIDLVAFSQGPGLGPCLRVVATAARALALSLDV----PLIGVNHCVAHV------ 113 (535)
T ss_pred HHHHHHHHH-HHHHHHHHHcCCCHhhCCEEEECCCCCcHhhHHHHHHHHHHHHHHhCC----CeecccHHHHHH------
Confidence 344455555 9999999999999999999988888764332 223345555554 344555433332
Q ss_pred HHHHHHhcCC-CCEEEEEEECC
Q 011007 233 LARDLLQVHP-NSNAVVVSTEI 253 (496)
Q Consensus 233 lA~~lL~~~~-~~~aLVVs~E~ 253 (496)
+..++.++. ..-+|+|++-.
T Consensus 114 -~~a~~~~~~~~~l~l~vsGg~ 134 (535)
T PRK09605 114 -EIGRLTTGAEDPVTLYVSGGN 134 (535)
T ss_pred -HHhhhccCCCCCeEEEEecCC
Confidence 222333332 23566666653
No 245
>KOG2707 consensus Predicted metalloprotease with chaperone activity (RNAse H/HSP70 fold) [Posttranslational modification, protein turnover, chaperones]
Probab=50.46 E-value=42 Score=34.94 Aligned_cols=49 Identities=24% Similarity=0.255 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCC-----cHHHHHHHHcCCC
Q 011007 163 ELVIFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTP-----SLSAMVINKYKLR 211 (496)
Q Consensus 163 ~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~P-----s~a~~I~~~Lgl~ 211 (496)
.+-.-.+.+++|+++|.+|+|+|++-+...|+.+.+ +.|-.++.++..+
T Consensus 83 r~ni~~~iqral~aa~~~p~dldaIAVT~gPGl~lsL~vGl~fA~glA~~l~kP 136 (405)
T KOG2707|consen 83 RENIPRLIQRALDAAGLSPKDLDAIAVTRGPGLPLSLKVGLSFAKGLAVKLQKP 136 (405)
T ss_pred HHHHHHHHHHHHHHcCCCcccceeEEEecCCCceeehhhhHHHHHHHHHhccCC
Confidence 344667889999999999999999988877775544 4566666666654
No 246
>PRK08722 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=50.46 E-value=35 Score=36.36 Aligned_cols=45 Identities=11% Similarity=0.014 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEe-eccCCCCCCcHHHHHHHHcCC
Q 011007 166 IFSAMDSLLQKTGLKPKDIDILIV-NCSLFSPTPSLSAMVINKYKL 210 (496)
Q Consensus 166 a~~Aa~~aL~~agi~p~dID~LI~-~ss~~~~~Ps~a~~I~~~Lgl 210 (496)
...|++++|+++|++|+|||.+-. .|++..-.+.-+..|.+-||-
T Consensus 280 ~~~a~~~Al~~agi~~~did~ie~hgtgt~~~D~~E~~al~~~fg~ 325 (414)
T PRK08722 280 GALAMEAAMRDAGVTGEQIGYVNAHGTSTPAGDVAEIKGIKRALGE 325 (414)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEccCccCCCCCHHHHHHHHHHhcc
Confidence 567889999999999999998853 355544455666677777763
No 247
>TIGR02845 spore_V_AD stage V sporulation protein AD. Bacillus and Clostridium species contain about 10 % dipicolinic acid (pyridine-2,6-dicarboxylic acid) by weight. This protein family, SpoVAD, belongs to the spoVA operon that is suggested to act in the transport of dipicolinic acid (DPA) from the mother cell, where DPA is synthesized, to the forespore, a process essential to sporulation. Members of this protein family are found, so far, in exactly those species believed capable of endospore formation.
Probab=50.25 E-value=74 Score=32.91 Aligned_cols=87 Identities=15% Similarity=0.252 Sum_probs=52.8
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCC--C---C--ceeeEe--------cCCCcchHHHH
Q 011007 166 IFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLR--S---N--IKSFNL--------SGMGCSAGLIS 230 (496)
Q Consensus 166 a~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~--~---~--~~~~dl--------~g~gCsg~l~a 230 (496)
|+..+.+=|+++|.+|+|=|+||..= ....--.+...+..+-|+. . | ..-||- +|.|||+.+..
T Consensus 204 a~dti~~h~~d~~~~~~~yd~i~tgd-lg~vg~~i~~~ll~~~g~~~~~~~~dcg~~iy~~~~~~~aggsgc~csa~v~~ 282 (327)
T TIGR02845 204 AADTIEAHFKDTGRSVDDYDLIVTGD-LARVGSEILRKLLKERGYDVTERYDDCGVMIYRPDQQVFAGGSGCACSAVVTY 282 (327)
T ss_pred HHHHHHHHHHHcCCChhhccEEEecc-hHHHHHHHHHHHHHHcCCChhhccccCCeEEEcCCCcccCCCcccchhHHHHH
Confidence 45555667889999999999988541 1222223344444444432 1 1 233433 34577777766
Q ss_pred HHHHHHHHhcCCCCEEEEEEECCC
Q 011007 231 IDLARDLLQVHPNSNAVVVSTEII 254 (496)
Q Consensus 231 l~lA~~lL~~~~~~~aLVVs~E~~ 254 (496)
=.+-+.| +.+..+++|+|++-.+
T Consensus 283 ~~~~~~~-~~g~~~r~l~v~tgal 305 (327)
T TIGR02845 283 GHILKEM-LRGKLKKVLVVATGAL 305 (327)
T ss_pred HHHHHHH-hcCcceEEEEEEchhh
Confidence 5555554 4567899999998874
No 248
>KOG1389 consensus 3-oxoacyl CoA thiolase [Lipid transport and metabolism]
Probab=49.01 E-value=40 Score=34.58 Aligned_cols=69 Identities=20% Similarity=0.273 Sum_probs=42.0
Q ss_pred HHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCC-------ceeeEecCCCcchHHHHHHHHHHHHhc
Q 011007 168 SAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSN-------IKSFNLSGMGCSAGLISIDLARDLLQV 240 (496)
Q Consensus 168 ~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~-------~~~~dl~g~gCsg~l~al~lA~~lL~~ 240 (496)
-|+.++|+++|++.+|||+.=.|- ..-|-+.+-.++||+.++ +.++.-- .||+|.=.-.-+-+.|=+.
T Consensus 324 vAIp~alk~aGL~v~did~FEINE----AFAsQ~~yc~~KL~ld~ekVN~~GGaiAlGHP-lGatGAR~VaTlL~emKrr 398 (435)
T KOG1389|consen 324 VAIPKALKAAGLEVDDIDLFEINE----AFASQALYCRNKLGLDPEKVNVNGGAIALGHP-LGATGARCVATLLHEMKRR 398 (435)
T ss_pred hhhHHHHHHcCCcccccceeehhH----HHHHHHHHHHHHhCCCHHHcCCCCceeeccCC-cCCccHhHHHHHHHHHHhh
Confidence 477899999999999999875442 122444566788988642 2333334 4677654444444444333
Q ss_pred C
Q 011007 241 H 241 (496)
Q Consensus 241 ~ 241 (496)
+
T Consensus 399 g 399 (435)
T KOG1389|consen 399 G 399 (435)
T ss_pred c
Confidence 3
No 249
>PRK08304 stage V sporulation protein AD; Validated
Probab=48.82 E-value=76 Score=32.95 Aligned_cols=87 Identities=20% Similarity=0.280 Sum_probs=53.7
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCC--C---C--ceeeEe---------cCCCcchHHH
Q 011007 166 IFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLR--S---N--IKSFNL---------SGMGCSAGLI 229 (496)
Q Consensus 166 a~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~--~---~--~~~~dl---------~g~gCsg~l~ 229 (496)
|+..+.+=|+++|.+|+|=|+||..= ....--.+...+..+-|+. . | +.-||. +|.|||+.+.
T Consensus 210 a~dti~~h~~d~~~~~~~yDli~tGD-lg~vG~~i~~~ll~~~g~~~~~~~~DcG~~iy~~~~q~~~aGgSGc~csa~v~ 288 (337)
T PRK08304 210 AADTIQQHFKDTGRSPEDYDLIVTGD-LGRVGREILKELLKEEGYDIGDNYNDCGLMIYDSEQQDVFAGGSGCACSAVVT 288 (337)
T ss_pred HHHHHHHHHHHcCCChhhccEEEEcc-hHHHHHHHHHHHHHHhCCChhhcccccCeEEeccCCCcccCCCcccchhHHHH
Confidence 44555666789999999999988541 2222223444444444442 1 2 345653 2357887776
Q ss_pred HHHHHHHHHhcCCCCEEEEEEECCC
Q 011007 230 SIDLARDLLQVHPNSNAVVVSTEII 254 (496)
Q Consensus 230 al~lA~~lL~~~~~~~aLVVs~E~~ 254 (496)
.=.+-+.| +.+..+++|+|++-.+
T Consensus 289 ~~~~~~~~-~~g~~~rvl~v~tGaL 312 (337)
T PRK08304 289 YGYLLKEL-QKGKLKRVLVVATGAL 312 (337)
T ss_pred HHHHHHHH-hcCCceEEEEEEchhh
Confidence 65555554 4567899999998875
No 250
>PRK09116 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=48.64 E-value=32 Score=36.58 Aligned_cols=45 Identities=20% Similarity=0.211 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEee-ccCCCCCCcHHHHHHHHcCC
Q 011007 166 IFSAMDSLLQKTGLKPKDIDILIVN-CSLFSPTPSLSAMVINKYKL 210 (496)
Q Consensus 166 a~~Aa~~aL~~agi~p~dID~LI~~-ss~~~~~Ps~a~~I~~~Lgl 210 (496)
...+++++|+++|++|+|||.+... |++..-.+.-+..|.+-||-
T Consensus 277 ~~~ai~~AL~~Agi~p~dId~I~~Hgtgt~~~D~~E~~Ai~~~fg~ 322 (405)
T PRK09116 277 MQIAMELALKDAGLAPEDIGYVNAHGTATDRGDIAESQATAAVFGA 322 (405)
T ss_pred HHHHHHHHHHHhCCCHHHcCEEECcCccCCCCCHHHHHHHHHHhCC
Confidence 4688999999999999999998743 65544456666778888873
No 251
>cd02185 AroH Chorismate mutase (AroH) is one of at least five chorismate-utilizing enzymes present in microorganisms that catalyze the rearrangement of chorismate to prephenic acid, the first committed step in the biosynthesis of aromatic amino acids. In prokaryotes, chorismate mutase may be fused to prephenate dehydratase, prephenate dehydrogenase, or 3-deoxy-D-arabino-heptulosonat-7-phosphate (DAHP) as part of a bifunctional enzyme. The AroH domain forms a homotrimer with three-fold symmetry.
Probab=48.37 E-value=42 Score=29.40 Aligned_cols=55 Identities=15% Similarity=0.234 Sum_probs=38.7
Q ss_pred HHHHHHHHcCCCcCCcCEEEeeccCC--CCCCcHHHHHHHHcCCCCCceeeEecCCCcch
Q 011007 169 AMDSLLQKTGLKPKDIDILIVNCSLF--SPTPSLSAMVINKYKLRSNIKSFNLSGMGCSA 226 (496)
Q Consensus 169 Aa~~aL~~agi~p~dID~LI~~ss~~--~~~Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg 226 (496)
-.++.+++.+++++||--++|+.++| ...| +..++++|.-.+++-++...|.=-|
T Consensus 25 Ll~~i~~~N~l~~edivSv~FT~T~DL~a~FP---A~aaR~~~~~~~Vplmc~qE~~V~g 81 (117)
T cd02185 25 LLEEIIERNNIKPEDIISVIFTVTPDLDAAFP---AKAARELGGWKYVPLMCAQEMDVPG 81 (117)
T ss_pred HHHHHHHHcCCCHHHEEEEEEEeCCcccccCh---HHHHHhcCCCCCcceeecCcCCCCC
Confidence 34566688999999999999987765 4466 4556677544478877777654444
No 252
>PLN02836 3-oxoacyl-[acyl-carrier-protein] synthase
Probab=48.11 E-value=90 Score=33.47 Aligned_cols=44 Identities=20% Similarity=0.261 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEee-ccCCCCCCcHHHHHHHHcC
Q 011007 166 IFSAMDSLLQKTGLKPKDIDILIVN-CSLFSPTPSLSAMVINKYK 209 (496)
Q Consensus 166 a~~Aa~~aL~~agi~p~dID~LI~~-ss~~~~~Ps~a~~I~~~Lg 209 (496)
...|++++|+++|++|+|||.+-.. +++..-.+.-...+..-+|
T Consensus 301 ~~~a~~~Al~~Agi~~~dId~ve~hgtgt~~~D~~E~~ai~~~~~ 345 (437)
T PLN02836 301 AVLAMTRALQQSGLHPNQVDYVNAHATSTPLGDAVEARAIKTVFS 345 (437)
T ss_pred HHHHHHHHHHHcCCCHhHcCEEEccCCcCcCcCHHHHHHHHHHhc
Confidence 5678999999999999999998643 4443333333444555554
No 253
>PLN03171 chalcone synthase-like protein; Provisional
Probab=48.00 E-value=62 Score=34.34 Aligned_cols=71 Identities=13% Similarity=0.056 Sum_probs=47.0
Q ss_pred HhHHHHHHHHHHHHHHH---------cCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCCcee------eEecCCCc
Q 011007 160 GEAELVIFSAMDSLLQK---------TGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSNIKS------FNLSGMGC 224 (496)
Q Consensus 160 ~ea~~la~~Aa~~aL~~---------agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~~~~------~dl~g~gC 224 (496)
++...++..++++++++ .|++++||+.++ .+. .+.+-..+.++||++++-.. -+.+|+++
T Consensus 275 ~~vp~~i~~~l~~~l~~~l~~~~~~~~g~~~~di~~~~---Hq~--~~~il~~v~~~Lgl~~ek~~~s~~~l~~yGNtss 349 (399)
T PLN03171 275 RQVPGLIGDNIERCLLDAFAPLLGGDGGAEWNDLFWAV---HPG--SSAILDQVDAALGLEPEKLAASRRVLSDYGNMFG 349 (399)
T ss_pred hhHHHHHHHHHHHHHHHHHHhhcccccCCCcccceEEE---cCC--cHHHHHHHHHHcCCCHHHhHHHHHHHHHhCcchh
Confidence 45666776667777765 578889998764 222 23566789999999854322 25666677
Q ss_pred chHHHHHHHHH
Q 011007 225 SAGLISIDLAR 235 (496)
Q Consensus 225 sg~l~al~lA~ 235 (496)
++...+|+-+.
T Consensus 350 aSip~~L~~~~ 360 (399)
T PLN03171 350 ATVIFALDELR 360 (399)
T ss_pred hhHHHHHHHHH
Confidence 77777776553
No 254
>PRK00768 nadE NAD synthetase; Reviewed
Probab=47.50 E-value=2.9e+02 Score=27.81 Aligned_cols=32 Identities=6% Similarity=0.078 Sum_probs=23.4
Q ss_pred CcHHHHHHHHcCCCCCceeeEecCCCcchHHHHH
Q 011007 198 PSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISI 231 (496)
Q Consensus 198 Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al 231 (496)
...|..+++.||+. +...+||. ....++...+
T Consensus 89 ~~da~~la~~lgi~-~~~~i~I~-~~~~~~~~~l 120 (268)
T PRK00768 89 EDDAQDALAFIQPD-RVLTVNIK-PAVDASVAAL 120 (268)
T ss_pred HHHHHHHHHhcCCC-eeEEEECH-HHHHHHHHHH
Confidence 46778899999984 46788888 4666665544
No 255
>cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations. PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits.
Probab=47.05 E-value=46 Score=34.95 Aligned_cols=46 Identities=13% Similarity=0.169 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEee-ccCCCCCCcHHHHHHHHcC
Q 011007 164 LVIFSAMDSLLQKTGLKPKDIDILIVN-CSLFSPTPSLSAMVINKYK 209 (496)
Q Consensus 164 ~la~~Aa~~aL~~agi~p~dID~LI~~-ss~~~~~Ps~a~~I~~~Lg 209 (496)
+-...|++++|+++|++|+|||.+... +++..-.+.-...|..-++
T Consensus 279 ~~~~~a~~~al~~Agi~~~did~i~~hgtgt~~~D~~E~~al~~~f~ 325 (421)
T cd00833 279 EAQAALIRRAYARAGVDPSDIDYVEAHGTGTPLGDPIEVEALAKVFG 325 (421)
T ss_pred HHHHHHHHHHHHHhCCCHHHCcEEEeeCCCCCCCCHHHHHHHHHHHh
Confidence 345689999999999999999998754 4433222333444555554
No 256
>PRK07910 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=45.38 E-value=47 Score=35.46 Aligned_cols=45 Identities=20% Similarity=0.109 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEE-eeccCCCCCCcHHHHHHHHcCC
Q 011007 166 IFSAMDSLLQKTGLKPKDIDILI-VNCSLFSPTPSLSAMVINKYKL 210 (496)
Q Consensus 166 a~~Aa~~aL~~agi~p~dID~LI-~~ss~~~~~Ps~a~~I~~~Lgl 210 (496)
...|++++|+++|++|+|||.+- +.|++..-.+.-+..|.+-||-
T Consensus 288 ~~~a~~~Al~~agi~~~did~ie~hgtgt~~~D~~E~~Al~~~fg~ 333 (418)
T PRK07910 288 AGHAMTRAIELAGLTPGDIDHVNAHATGTSVGDVAEGKAINNALGG 333 (418)
T ss_pred HHHHHHHHHHHhCCCHHHCCEEEcCCcCCCCCCHHHHHHHHHHhCC
Confidence 56889999999999999999985 3355544456667778888874
No 257
>COG1153 FwdD Formylmethanofuran dehydrogenase subunit D [Energy production and conversion]
Probab=45.26 E-value=24 Score=30.98 Aligned_cols=51 Identities=20% Similarity=0.330 Sum_probs=34.2
Q ss_pred CchHHHHHHHHHhCCCCCCCEEEEEe-echhHhhhheeeEeeccCCC-CC-----CCCCcccccC
Q 011007 428 SSLWYEMSYIEEKGRMKKGDRVWQIA-FGSGFKCNSAVWKCNKTIKT-TT-----DNPWSDCIDR 485 (496)
Q Consensus 428 aSi~~~La~~~~~g~i~~Gd~Vll~~-fG~G~~~~sav~r~~~~~~~-~~-----~~~w~~~~~~ 485 (496)
|.++++=+.+.+-| ++.||+|.+-+ || .+|+++-..-.. +. .+||++++-+
T Consensus 31 a~~~inp~D~~~Lg-v~EGD~VkVkse~G------eVVV~Ak~~~~~~pG~vfiPmgpWaN~vi~ 88 (128)
T COG1153 31 AVCEINPEDMKQLG-VSEGDKVKVKSEFG------EVVVKAKEADGVQPGMVFIPMGPWANVVID 88 (128)
T ss_pred eEEEECHHHHHHhC-CCcCCeEEEEecCc------cEEEEEeeCCCCCCCeEEecCCcccceeeC
Confidence 44555555555544 68999999887 77 677877655321 11 6899998743
No 258
>PRK12404 stage V sporulation protein AD; Provisional
Probab=44.71 E-value=91 Score=32.30 Aligned_cols=87 Identities=16% Similarity=0.266 Sum_probs=53.4
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCC------C--ceeeEe--------cCCCcchHHH
Q 011007 166 IFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRS------N--IKSFNL--------SGMGCSAGLI 229 (496)
Q Consensus 166 a~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~------~--~~~~dl--------~g~gCsg~l~ 229 (496)
|+..+.+=|+++|.+|+|=|+||.. .....--.+...+..+-|+.- | +.-||- +|.|||+.+.
T Consensus 208 A~dti~~h~~d~~~~~~~yDlI~TG-DLg~vG~~i~~~ll~~~g~~~~~~~~~DCG~~iyd~~~~~~aGgSGcgcsA~v~ 286 (334)
T PRK12404 208 AVDTIEAHLRDRQIDASYYDLIVTG-DLGHVGREIAKDLLHKHGVKVPEEQFQDCGLLIYREGQPVIAGASGPGCSATVT 286 (334)
T ss_pred HHHHHHHHHHHhCCChhhccEEEEc-chHHHHHHHHHHHHHHcCCCCCcccccccCeEEecCCCcccCCCcccchHHHHH
Confidence 4555566788999999999998854 122222234444555545421 1 234442 3457777776
Q ss_pred HHHHHHHHHhcCCCCEEEEEEECCC
Q 011007 230 SIDLARDLLQVHPNSNAVVVSTEII 254 (496)
Q Consensus 230 al~lA~~lL~~~~~~~aLVVs~E~~ 254 (496)
.=.+-+.| +.+..+++|+|++-.+
T Consensus 287 ~g~~~~~~-~~g~~~rvL~v~TGAL 310 (334)
T PRK12404 287 YGHLLNRM-KRGELKRILVVATGAL 310 (334)
T ss_pred HHHHHHHH-hcCCceEEEEEEchhh
Confidence 55555444 4567899999998875
No 259
>PLN03172 chalcone synthase family protein; Provisional
Probab=43.43 E-value=50 Score=35.04 Aligned_cols=69 Identities=14% Similarity=0.108 Sum_probs=47.3
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCCcee------eEecCCCcchHHHHHHHH
Q 011007 162 AELVIFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSNIKS------FNLSGMGCSAGLISIDLA 234 (496)
Q Consensus 162 a~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~~~~------~dl~g~gCsg~l~al~lA 234 (496)
+..-....++++|+++|++..|||..++.. .-+.+-..|+++||++++-.. -+.+||+.++.+.+|+-+
T Consensus 275 ~~~~i~~~~~~~L~~~gl~~~di~~~~~Hq----gg~~Il~~v~~~Lgl~~~~~~~s~~vl~~yGNtSSaSv~~vL~~~ 349 (393)
T PLN03172 275 ISKNIEKSLVEAFAPIGINDWNSIFWIAHP----GGPAILDQVEIKLDLKEEKLRATRHVLSDYGNMSSACVLFILDEM 349 (393)
T ss_pred HHHHHHHHHHHHhhhcCCCccccceEEecC----CcHHHHHHHHHHcCCCHHHHHHHHHHHHHhCccHHhHHHHHHHHH
Confidence 455566677889999999999999876442 124566779999999864332 134556666666777644
No 260
>KOG1406 consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44/SCP2 [Lipid transport and metabolism]
Probab=43.06 E-value=23 Score=35.42 Aligned_cols=29 Identities=24% Similarity=0.401 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEee
Q 011007 162 AELVIFSAMDSLLQKTGLKPKDIDILIVN 190 (496)
Q Consensus 162 a~~la~~Aa~~aL~~agi~p~dID~LI~~ 190 (496)
--||...|++++++++|+.|.||+++=..
T Consensus 270 gfdm~~~aa~~l~aksgltpndvqvielh 298 (408)
T KOG1406|consen 270 GFDMTRLAAKRLFAKSGLTPNDVQVIELH 298 (408)
T ss_pred cchHHHHHHHHHHHHcCCCcccceEEEee
Confidence 45788999999999999999999988543
No 261
>PF07451 SpoVAD: Stage V sporulation protein AD (SpoVAD); InterPro: IPR010894 This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long. This is one of six proteins encoded by the spoVA operon, which is transcribed exclusively in the forespore at about the time of dipicolinic acid (DPA) synthesis in the mother cell. The functions of the proteins encoded by the spoVA operon are unknown, but it has been suggested they are involved in DPA transport during sporulation [].; PDB: 3LMA_D 3LM6_A.
Probab=42.96 E-value=25 Score=35.91 Aligned_cols=87 Identities=17% Similarity=0.266 Sum_probs=47.0
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCC-------ceeeEec---------CCCcchHHH
Q 011007 166 IFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSN-------IKSFNLS---------GMGCSAGLI 229 (496)
Q Consensus 166 a~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~-------~~~~dl~---------g~gCsg~l~ 229 (496)
|+..+.+=|+++|.+|+|=|+||..= ....--.+...+.++-|+.-. +.-||.. |.|||+.+.
T Consensus 205 A~dTI~~h~~D~g~~p~dYDlIvTGD-Lg~vG~~il~~Ll~~~G~~i~~~~~DCG~~iyd~~~Qdv~aGGSGcgCSA~V~ 283 (329)
T PF07451_consen 205 AADTIEQHFKDTGRSPDDYDLIVTGD-LGKVGRKILRDLLKEKGYDISENYNDCGLMIYDPEKQDVHAGGSGCGCSAVVL 283 (329)
T ss_dssp HHHHHHHHHHHCT--GGG-SEEEESS--HHHHHHHHHHHHHHTT---GGGEEEHHHCSS-TT-S--TT-EESHHHHHHHH
T ss_pred HHHHHHHHHHHhCCChhhcCeEEecc-hHHHHHHHHHHHHHHcCCCCccccccCCeEeecCCccccccCCCCcchHHHHH
Confidence 34445566789999999999998541 111112344555555554311 1223333 457777776
Q ss_pred HHHHHHHHHhcCCCCEEEEEEECCC
Q 011007 230 SIDLARDLLQVHPNSNAVVVSTEII 254 (496)
Q Consensus 230 al~lA~~lL~~~~~~~aLVVs~E~~ 254 (496)
.=.+-+.| +.+..+++|+|++-.+
T Consensus 284 ~g~ll~~l-~~g~~krvL~vaTGAL 307 (329)
T PF07451_consen 284 CGYLLPKL-RKGELKRVLFVATGAL 307 (329)
T ss_dssp HHCHHHHH-HTTS-SEEEEEEEEE-
T ss_pred HHHHHHHH-HcCCceEEEEEEchhh
Confidence 65555554 4577899999998774
No 262
>PRK06066 acetyl-CoA acetyltransferase; Provisional
Probab=42.35 E-value=1e+02 Score=32.62 Aligned_cols=41 Identities=20% Similarity=0.164 Sum_probs=27.7
Q ss_pred HHHHHHHHHHcCCC--cCCcCEEEeeccCCCCCCcHHHHHHHHcCCC
Q 011007 167 FSAMDSLLQKTGLK--PKDIDILIVNCSLFSPTPSLSAMVINKYKLR 211 (496)
Q Consensus 167 ~~Aa~~aL~~agi~--p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~ 211 (496)
..|++++++++|++ ++|||++-+. + ......-+..+.||+.
T Consensus 259 ~~Aa~~a~~~AGi~~p~~DiD~~ei~---D-~Ft~~~l~~~e~lG~~ 301 (385)
T PRK06066 259 RIAADMAYKMAGIESPRKEVDAAEVD---D-RYSYKELQHIEALRLS 301 (385)
T ss_pred HHHHHHHHHHcCCCCCHHHCcEEEEe---c-CChHHHHHHHHHcCCC
Confidence 36999999999997 6999998655 1 1122233445566654
No 263
>PRK06157 acetyl-CoA acetyltransferase; Validated
Probab=42.06 E-value=1.1e+02 Score=32.42 Aligned_cols=43 Identities=9% Similarity=0.104 Sum_probs=29.1
Q ss_pred HHHHHHHHHHHcCCC--cCCcCEEEeeccCCCCCCcHHHHHHHHcCCCC
Q 011007 166 IFSAMDSLLQKTGLK--PKDIDILIVNCSLFSPTPSLSAMVINKYKLRS 212 (496)
Q Consensus 166 a~~Aa~~aL~~agi~--p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~ 212 (496)
...|++++++++|++ ++|||++=+.- ......-+..+.||+.+
T Consensus 268 ~~~aa~~a~~~AGl~~~~~Did~~Ei~D----~Fs~~~l~~~e~lGl~~ 312 (398)
T PRK06157 268 TRIAARKAYREAGITDPREELSMAEVHD----CFSITELVTMEDLGLSE 312 (398)
T ss_pred HHHHHHHHHHHcCCCCchhcCCEEEEec----CChHHHHHHHHHcCCCC
Confidence 457999999999998 79999985431 12233344556677653
No 264
>PF07736 CM_1: Chorismate mutase type I; InterPro: IPR008243 Chorismate mutase (CM; 5.4.99.5 from EC) catalyses the reaction at the branch point of the biosynthetic pathway leading to the three aromatic amino acids, phenylalanine, tryptophan and tyrosine (chorismic acid is the last common intermediate, and CM leads to the L-phenylalanine/L-tyrosine branch). It is part of the shikimate pathway, which is present only in bacteria, fungi and plants. This entry represents a family of monofunctional (non-fused) chorismate mutases from Gram-positive bacteria (Firmicutes) and cyanobacteria. Trusted members of the family are found in operons with other enzymes of the chorismate pathways, both up- and downstream of CM (Listeria, Bacillus, Oceanobacillus) or are the sole CM in the genome where the other members of the chorismate pathways are found elsewhere in the genome (Nostoc, Thermosynechococcus). They are monofunctional, homotrimeric, nonallosteric enzymes and are not regulated by the end-product aromatic amino acids. The three types of CM are AroQ class, Prokaryotic type (e.g., IPR008239 from INTERPRO amongst others); AroQ class, Eukaryotic type (IPR008238 from INTERPRO); and AroH class. They fall into two structural folds (AroQ class and AroH class) which are completely unrelated []. The two types of the AroQ structural class (the Escherichia coli CM dimer and the yeast CM monomer) can be structurally superimposed, and the topology of the four-helix bundle forming the active site is conserved []. For additional information please see [, , , , , , ].; PDB: 2CHS_K 2CHT_L 1COM_J 1FNJ_A 1FNK_A 1DBF_C 1UI9_A 1ODE_A 1UFY_A 1XHO_C ....
Probab=39.61 E-value=67 Score=28.20 Aligned_cols=51 Identities=14% Similarity=0.253 Sum_probs=33.0
Q ss_pred HHHHHHHHHHcCCCcCCcCEEEeeccCC--CCCCcHHHHHHHHc-CCCCCceeeEecC
Q 011007 167 FSAMDSLLQKTGLKPKDIDILIVNCSLF--SPTPSLSAMVINKY-KLRSNIKSFNLSG 221 (496)
Q Consensus 167 ~~Aa~~aL~~agi~p~dID~LI~~ss~~--~~~Ps~a~~I~~~L-gl~~~~~~~dl~g 221 (496)
.+-.++.+++.+++|+||--++|+.++| ...|+.+ ++++ |+. +++-+...-
T Consensus 23 ~eLl~~i~~~N~l~~~dIvSi~FT~T~DL~a~fPA~a---~R~~~g~~-~Vpl~c~~E 76 (118)
T PF07736_consen 23 RELLEEILERNELSPEDIVSIIFTVTPDLDAAFPAAA---ARELPGWD-DVPLMCAQE 76 (118)
T ss_dssp HHHHHHHHHHTT--GGGEEEEEEEE-TT--SS-TCHH---HHHTTTGT-TSEEEEEE-
T ss_pred HHHHHHHHHHcCCCHHHEEEEEEEeCCCcCccChHHH---HHccCCCC-ccceeccCc
Confidence 3444567788999999999999998765 5567654 3455 776 777777664
No 265
>PRK09585 anmK anhydro-N-acetylmuramic acid kinase; Reviewed
Probab=37.28 E-value=88 Score=32.93 Aligned_cols=66 Identities=17% Similarity=0.298 Sum_probs=46.1
Q ss_pred hHHHHHhHHHHHHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCC--------cHHHHHHHHcCCC--CCceeeEec
Q 011007 155 MEAARGEAELVIFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTP--------SLSAMVINKYKLR--SNIKSFNLS 220 (496)
Q Consensus 155 ~~~~~~ea~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~P--------s~a~~I~~~Lgl~--~~~~~~dl~ 220 (496)
+.+...+.-.+-.+|++++++++++++++||+|=....+-+..| ...+.|+++.|++ .|-++-|+.
T Consensus 62 l~~l~~~lg~~~a~av~~~~~~~~l~~~~id~IgsHGQTv~H~P~~~~TlQiG~~~~iA~~tgi~VV~DFR~~D~a 137 (365)
T PRK09585 62 LAELDTALGRLFAEAVNALLAEAGLSPEDIDAIGSHGQTVRHRPGEGFTLQIGDGALIAELTGITVVADFRRRDVA 137 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCccCccEEEeCCcccccCCCCCCeEEcCCHHHHHHHHCcCEEecChHHHHh
Confidence 44555667778899999999999999999998854433322233 3467888888876 134455555
No 266
>PRK13410 molecular chaperone DnaK; Provisional
Probab=36.80 E-value=1.1e+02 Score=35.03 Aligned_cols=74 Identities=19% Similarity=0.228 Sum_probs=48.8
Q ss_pred hHHHHHhHHHHHHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCCceeeEecCCCcchHHHHHH
Q 011007 155 MEAARGEAELVIFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISID 232 (496)
Q Consensus 155 ~~~~~~ea~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~ 232 (496)
+++-.++-.+-....++++|+++|+++++||.|+++... ...|.+-.+|.+.+|.. ...+++..-|.+.-.|+.
T Consensus 300 FE~l~~~l~~r~~~~i~~~L~~ag~~~~dId~VvLVGGs-sRiP~V~~~l~~~fg~~---~~~~~npdeaVA~GAAi~ 373 (668)
T PRK13410 300 FESLCGDLLDRLLRPVKRALKDAGLSPEDIDEVVLVGGS-TRMPMVQQLVRTLIPRE---PNQNVNPDEVVAVGAAIQ 373 (668)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCChhhCcEEEEECCc-cccHHHHHHHHHHcCCC---cccCCCCchHHHHhHHHH
Confidence 333333344446667889999999999999999866432 34788889999999854 234455434554444444
No 267
>TIGR01743 purR_Bsub pur operon repressor, Bacillus subtilis type. This model represents the puring operon repressor PurR of low-GC Gram-positive bacteria. This homodimeric repressor contains a large region homologous to phosphoribosyltransferases and is inhibited by 5-phosphoribosyl 1-pyrophosphate.
Probab=34.55 E-value=4.3e+02 Score=26.55 Aligned_cols=49 Identities=18% Similarity=0.326 Sum_probs=31.9
Q ss_pred HHHHHhcCCCceEEEEeeeecCCCCcccChHHHHHHHhhhhcCCcchHHHHHHHHHHcCCCcee
Q 011007 77 ATVYFMSKPRHVYLVDYACYKPPVTCRVPFATFMEHSRLILKNNPKSVEFQMRILERSGLGEET 140 (496)
Q Consensus 77 ~~~~~~~~~~~v~Iv~~~~y~P~~~~~v~~~~~~e~~~~~~~~~~~~~~f~~~i~~~sGi~~r~ 140 (496)
.+-|++.+|+ .-++-..|.+.++....--.|.+..+++.++..|+|.-.
T Consensus 10 ~t~~l~~~p~---------------~~~~l~~f~~~~~~aks~ised~~i~~~~~~~~~~g~~~ 58 (268)
T TIGR01743 10 LTNYLITNPN---------------KLIPLNFFSERYESAKSSISEDIVIIKETFEKFGIGKLL 58 (268)
T ss_pred HHHHHHhCCC---------------ceEcHHHHHHHhccccchhhhhHHHHHHHHHhcCCceEE
Confidence 4567777765 457777788777643321134477778888888887654
No 268
>PRK07103 polyketide beta-ketoacyl:acyl carrier protein synthase; Validated
Probab=32.19 E-value=1.1e+02 Score=32.49 Aligned_cols=27 Identities=26% Similarity=0.490 Sum_probs=22.3
Q ss_pred HHHHHHHHHHcCCCcCCcCEEEee-ccC
Q 011007 167 FSAMDSLLQKTGLKPKDIDILIVN-CSL 193 (496)
Q Consensus 167 ~~Aa~~aL~~agi~p~dID~LI~~-ss~ 193 (496)
.++++++|+++|++|+|||.+-.. |++
T Consensus 284 ~~a~~~Al~~Agi~~~dId~v~~hgtgt 311 (410)
T PRK07103 284 MRVIRAALRRAGLGPEDIDYVNPHGTGS 311 (410)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEccCCCC
Confidence 589999999999999999987533 443
No 269
>KOG1394 consensus 3-oxoacyl-(acyl-carrier-protein) synthase (I and II) [Lipid transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=31.42 E-value=60 Score=34.03 Aligned_cols=46 Identities=22% Similarity=0.220 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEE-eeccCCCCCCcHHHHHHHHcCC
Q 011007 165 VIFSAMDSLLQKTGLKPKDIDILI-VNCSLFSPTPSLSAMVINKYKL 210 (496)
Q Consensus 165 la~~Aa~~aL~~agi~p~dID~LI-~~ss~~~~~Ps~a~~I~~~Lgl 210 (496)
=+..|.+++|+++|+.|+|||-|= ++||+..-.-.-+..|.+-|+-
T Consensus 302 Ga~~am~raL~~Agl~pe~i~YvNAHATST~~GD~aE~~Ai~~vf~~ 348 (440)
T KOG1394|consen 302 GAVLAMERALKDAGLSPEDIDYVNAHATSTPLGDAAEAEAIKRVFGE 348 (440)
T ss_pred hHHHHHHHHHHHcCCChhhcCeeecccccCcCchHHHHHHHHHHhcc
Confidence 378899999999999999999884 4566533222334445555553
No 270
>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=30.84 E-value=56 Score=31.63 Aligned_cols=38 Identities=32% Similarity=0.420 Sum_probs=28.2
Q ss_pred cCCccCCchHHHHHHHHHhCCCCCCCEEEEEeechhHhhh
Q 011007 422 FGNTSSSSLWYEMSYIEEKGRMKKGDRVWQIAFGSGFKCN 461 (496)
Q Consensus 422 ~GNtsSaSi~~~La~~~~~g~i~~Gd~Vll~~fG~G~~~~ 461 (496)
+|-|-|. |...+.+.+.=.+++||+|+=||-|+|+..+
T Consensus 51 ~gqtis~--P~~vA~m~~~L~~~~g~~VLEIGtGsGY~aA 88 (209)
T COG2518 51 CGQTISA--PHMVARMLQLLELKPGDRVLEIGTGSGYQAA 88 (209)
T ss_pred CCceecC--cHHHHHHHHHhCCCCCCeEEEECCCchHHHH
Confidence 4555444 5566666666678999999999999998654
No 271
>PF00195 Chal_sti_synt_N: Chalcone and stilbene synthases, N-terminal domain; InterPro: IPR001099 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2.3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyse the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group [].; GO: 0016746 transferase activity, transferring acyl groups, 0009058 biosynthetic process; PDB: 3EUO_B 3EUT_C 3EUQ_D 3E1H_A 3AWK_A 3AWJ_A 2H84_A 3A5S_A 3A5Q_B 3A5R_A ....
Probab=30.73 E-value=78 Score=31.03 Aligned_cols=68 Identities=15% Similarity=0.193 Sum_probs=40.2
Q ss_pred hccccEEEe----ccCCHHHHHHHHHHcCCChhhHhhhhhhhcccCCccCCchHHHHHHHHHhCCCCCCCEEEEEeec
Q 011007 382 KQAFEHFCI----HAGGRAVIDELQKNLQLSAEHVEASRMTLHRFGNTSSSSLWYEMSYIEEKGRMKKGDRVWQIAFG 455 (496)
Q Consensus 382 ~~did~f~~----H~~~~~v~~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~i~~Gd~Vll~~fG 455 (496)
.+||+|++. -...+.+--.+.+.|||+++-- |.-+.-.|--++.+.+-.-.+..+. .||.+|++++.=
T Consensus 119 ~~dIthlv~vs~TG~~~PglD~~l~~~LgL~~~v~---R~~i~~~GC~gg~~~L~~A~~~~~~---~p~a~VLvv~vE 190 (226)
T PF00195_consen 119 PSDITHLVTVSCTGIAAPGLDARLINRLGLRPDVQ---RTPIFGMGCAGGAAGLRRAKDIARA---NPGARVLVVCVE 190 (226)
T ss_dssp GGGECEEEEEESSSSECS-HHHHHHHHHT--TTSE---EEEEES-GGGHHHHHHHHHHHHHHH---STT-EEEEEEEE
T ss_pred CcccceEEEEecCCcCCCchhHHHHhcCCCCCCcE---EEEEeccchhhHHHHHHHHHHHHhC---CccceEEEEEEE
Confidence 589999996 2344566678999999997533 4455555655555544322333332 589999998764
No 272
>PRK05183 hscA chaperone protein HscA; Provisional
Probab=30.61 E-value=2.5e+02 Score=31.69 Aligned_cols=66 Identities=11% Similarity=0.051 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCCceeeEecCCCcchHHHHH
Q 011007 162 AELVIFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISI 231 (496)
Q Consensus 162 a~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al 231 (496)
..+=....++++|++++++++|||.|+.+... ...|.+..+|.+.+|... ..+++-.-|.+.-.|+
T Consensus 307 l~~~~~~~i~~~L~~a~~~~~~i~~ViLvGGs-sriP~v~~~l~~~fg~~~---~~~~npdeaVA~GAAi 372 (616)
T PRK05183 307 LVKRTLLACRRALRDAGVEADEVKEVVMVGGS-TRVPLVREAVGEFFGRTP---LTSIDPDKVVAIGAAI 372 (616)
T ss_pred HHHHHHHHHHHHHHHcCCCcccCCEEEEECCc-ccChHHHHHHHHHhccCc---CcCCCchHHHHHHHHH
Confidence 33335566789999999999999999876432 347889999999998652 2345533444433343
No 273
>TIGR01991 HscA Fe-S protein assembly chaperone HscA. The Heat Shock Cognate proteins HscA and HscB act together as chaperones. HscA resembles DnaK but belongs in a separate clade. The apparent function is to aid assembly of iron-sulfur cluster proteins. Homologs from Buchnera and Wolbachia are clearly in the same clade but are highly derived and score lower than some examples of DnaK.
Probab=30.40 E-value=2.7e+02 Score=31.27 Aligned_cols=49 Identities=14% Similarity=0.165 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCC
Q 011007 162 AELVIFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLR 211 (496)
Q Consensus 162 a~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~ 211 (496)
..+=....++++|++++++++|||.|+++... ...|.+-.+|.+.+|..
T Consensus 291 ll~~i~~~i~~~L~~a~~~~~~id~ViLvGGs-sriP~V~~~l~~~f~~~ 339 (599)
T TIGR01991 291 LVQKTLSICRRALRDAGLSVEEIKGVVLVGGS-TRMPLVRRAVAELFGQE 339 (599)
T ss_pred HHHHHHHHHHHHHHHcCCChhhCCEEEEECCc-CCChHHHHHHHHHhCCC
Confidence 33335677889999999999999999866322 35789999999999864
No 274
>KOG1391 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=29.32 E-value=71 Score=31.95 Aligned_cols=49 Identities=37% Similarity=0.538 Sum_probs=34.0
Q ss_pred HHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCCceeeEecC
Q 011007 167 FSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSNIKSFNLSG 221 (496)
Q Consensus 167 ~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~~~~~dl~g 221 (496)
+.|++.+|+++|++-+|||++=+|-. ..|. .-.+++.|+++ +.-.|++|
T Consensus 296 vPAI~~vLKksGlkl~DiDl~EvNEA---FApQ-~LAv~r~L~ld--~sKlNVNG 344 (396)
T KOG1391|consen 296 VPAISGVLKKSGLKLKDIDLVEVNEA---FAPQ-YLAVERSLDLD--ISKLNVNG 344 (396)
T ss_pred cHHHHHHHHHcCCcccccceEEechh---hchH-HHHHHHhhCCC--hhhccccC
Confidence 46888999999999999998876632 1221 23467778874 56667775
No 275
>PLN03184 chloroplast Hsp70; Provisional
Probab=28.38 E-value=1.7e+02 Score=33.33 Aligned_cols=66 Identities=15% Similarity=0.089 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCCceeeEecCCCcchHHHHHH
Q 011007 163 ELVIFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISID 232 (496)
Q Consensus 163 ~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~ 232 (496)
.+=....++++|++++++++|||.|+++... ...|.+-.+|.+.+|.. ....++..-|.+.-.|+.
T Consensus 345 ~~r~~~~i~~~L~~a~~~~~dId~ViLvGGs-sriP~V~~~i~~~fg~~---~~~~~npdeaVA~GAAi~ 410 (673)
T PLN03184 345 LDRCKTPVENALRDAKLSFKDIDEVILVGGS-TRIPAVQELVKKLTGKD---PNVTVNPDEVVALGAAVQ 410 (673)
T ss_pred HHHHHHHHHHHHHHcCCChhHccEEEEECCc-cccHHHHHHHHHHhCCC---cccccCcchHHHHHHHHH
Confidence 3335566788999999999999999876432 24789999999999864 234455444444444443
No 276
>CHL00094 dnaK heat shock protein 70
Probab=27.92 E-value=1.7e+02 Score=32.89 Aligned_cols=45 Identities=16% Similarity=0.248 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCC
Q 011007 166 IFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLR 211 (496)
Q Consensus 166 a~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~ 211 (496)
....++++|+++++++++||.|+..... ...|.+-.+|.+.+|..
T Consensus 311 ~~~~i~~~L~~a~~~~~~i~~ViLvGGs-sriP~v~~~l~~~fg~~ 355 (621)
T CHL00094 311 CRIPVENALKDAKLDKSDIDEVVLVGGS-TRIPAIQELVKKLLGKK 355 (621)
T ss_pred HHHHHHHHHHHcCCChhhCcEEEEECCc-cCChHHHHHHHHHhCCC
Confidence 4456789999999999999999876432 45799999999999854
No 277
>TIGR02350 prok_dnaK chaperone protein DnaK. Members of this family are the chaperone DnaK, of the DnaK-DnaJ-GrpE chaperone system. All members of the seed alignment were taken from completely sequenced bacterial or archaeal genomes and (except for Mycoplasma sequence) found clustered with other genes of this systems. This model excludes DnaK homologs that are not DnaK itself, such as the heat shock cognate protein HscA (TIGR01991). However, it is not designed to distinguish among DnaK paralogs in eukaryotes. Note that a number of dnaK genes have shadow ORFs in the same reverse (relative to dnaK) reading frame, a few of which have been assigned glutamate dehydrogenase activity. The significance of this observation is unclear; lengths of such shadow ORFs are highly variable as if the presumptive protein product is not conserved.
Probab=26.59 E-value=1.7e+02 Score=32.64 Aligned_cols=74 Identities=16% Similarity=0.160 Sum_probs=47.9
Q ss_pred hHHHHHhHHHHHHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCCceeeEecCCCcchHHHHHH
Q 011007 155 MEAARGEAELVIFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISID 232 (496)
Q Consensus 155 ~~~~~~ea~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~ 232 (496)
|++..++..+=....++++|+++|+++++||.|++..+. ...|.+-..|.+.+|.. ...+++-.-|.+.-.|+.
T Consensus 296 fe~l~~~l~~~~~~~i~~~l~~a~~~~~~i~~V~LvGGs-sriP~v~~~i~~~f~~~---~~~~~~pdeava~GAa~~ 369 (595)
T TIGR02350 296 FEELTADLVERTKEPVRQALKDAGLSASDIDEVILVGGS-TRIPAVQELVKDFFGKE---PNKSVNPDEVVAIGAAIQ 369 (595)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHhHCcEEEEECCc-ccChHHHHHHHHHhCCc---ccCCcCcHHHHHHHHHHH
Confidence 333333333445667789999999999999999876432 24799999999999843 233444344444444443
No 278
>PRK00290 dnaK molecular chaperone DnaK; Provisional
Probab=26.41 E-value=2e+02 Score=32.36 Aligned_cols=67 Identities=16% Similarity=0.135 Sum_probs=45.9
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCCceeeEecCCCcchHHHHHH
Q 011007 162 AELVIFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISID 232 (496)
Q Consensus 162 a~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~ 232 (496)
..+=....++++|+++++++++||.|+++... ...|.+-.+|.+.+|.. ...+++-.-|.+.-.|+.
T Consensus 305 l~~~~~~~i~~~l~~a~~~~~~id~ViLvGGs-sriP~v~~~l~~~fg~~---~~~~~npdeava~GAa~~ 371 (627)
T PRK00290 305 LVERTIEPCKQALKDAGLSVSDIDEVILVGGS-TRMPAVQELVKEFFGKE---PNKGVNPDEVVAIGAAIQ 371 (627)
T ss_pred HHHHHHHHHHHHHHHcCCChhhCcEEEEECCc-CCChHHHHHHHHHhCCC---CCcCcCChHHHHHhHHHH
Confidence 33345667789999999999999999866432 34789999999999854 223444445555444443
No 279
>PF09269 DUF1967: Domain of unknown function (DUF1967); InterPro: IPR015349 The Obg family comprises a group of ancient P-loop small G proteins (GTPases) belonging to the TRAFAC (for translation factors) class and can be subdivided into several distinct protein subfamilies []. OBG GTPases have been found in both prokaryotes and eukaryotes []. The structure of the OBG GTPase from Thermus thermophilus has been determined []. This entry represents a C-terminal domain found in certain OBG GTPases. This domain contains a four-stranded beta sheet and three alpha helices flanked by an additional beta strand. It is predominantly found in the bacterial GTP-binding protein Obg, and is functionally uncharacterised. ; GO: 0000166 nucleotide binding; PDB: 1UDX_A.
Probab=26.38 E-value=79 Score=24.83 Aligned_cols=35 Identities=14% Similarity=0.072 Sum_probs=22.2
Q ss_pred cccChHHHHHHHhhhhcCCcchHHHHHHHHHHcCC
Q 011007 102 CRVPFATFMEHSRLILKNNPKSVEFQMRILERSGL 136 (496)
Q Consensus 102 ~~v~~~~~~e~~~~~~~~~~~~~~f~~~i~~~sGi 136 (496)
.+|.-+.+...+.....-+++++....+++++.|+
T Consensus 11 ~~V~g~~ie~~~~~~~~~~~e~~~rf~~~L~~~Gv 45 (69)
T PF09269_consen 11 FVVEGPKIERLVAMTNFDDEESLRRFQRKLKKMGV 45 (69)
T ss_dssp EEEE-HHHHHHHTTEEE-TGGGHHHHHHHHHHTTH
T ss_pred EEEEChHHHHHHHhcCCCCHHHHHHHHHHHHHCCH
Confidence 45666666666665444467777777788888776
No 280
>PTZ00186 heat shock 70 kDa precursor protein; Provisional
Probab=25.49 E-value=2.4e+02 Score=32.07 Aligned_cols=63 Identities=10% Similarity=0.087 Sum_probs=43.9
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCCceeeEecCCCcchHHHHHH
Q 011007 166 IFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISID 232 (496)
Q Consensus 166 a~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~ 232 (496)
....++++|+++|++++|||.||++... ...|.+-.+|.+.+|..+ ..+++-.-|.+.-.|+.
T Consensus 336 ~~~~v~~~L~~a~~~~~dId~VvLVGGs-sriP~V~~~l~~~fg~~~---~~~~nPdeaVA~GAAi~ 398 (657)
T PTZ00186 336 SIAPCKQCMKDAGVELKEINDVVLVGGM-TRMPKVVEEVKKFFQKDP---FRGVNPDEAVALGAATL 398 (657)
T ss_pred HHHHHHHHHHHcCCChhhCCEEEEECCc-ccChHHHHHHHHHhCCCc---cccCCCchHHHHhHHHH
Confidence 4556788999999999999999876422 357899999999998642 23455344544444443
No 281
>PRK08142 acetyl-CoA acetyltransferase; Provisional
Probab=25.38 E-value=1e+02 Score=32.59 Aligned_cols=24 Identities=17% Similarity=0.256 Sum_probs=20.9
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEe
Q 011007 166 IFSAMDSLLQKTGLKPKDIDILIV 189 (496)
Q Consensus 166 a~~Aa~~aL~~agi~p~dID~LI~ 189 (496)
...|++++++++|++|+|||++-+
T Consensus 257 ~~~aa~~a~~~AGi~~~did~~el 280 (388)
T PRK08142 257 AAWSGPAAFAEAGVTPADIKYASI 280 (388)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEE
Confidence 457999999999999999998743
No 282
>TIGR03595 Obg_CgtA_exten Obg family GTPase CgtA, C-terminal extension. CgtA (see model TIGR02729) is a broadly conserved member of the obg family of GTPases associated with ribosome maturation. This model represents a unique C-terminal domain found in some but not all sequences of CgtA. This region is preceded, and may be followed, by a region of low-complexity sequence.
Probab=24.27 E-value=1.5e+02 Score=23.32 Aligned_cols=35 Identities=17% Similarity=0.057 Sum_probs=20.4
Q ss_pred cccChHHHHHHHhhhhcCCcchHHHHHHHHHHcCC
Q 011007 102 CRVPFATFMEHSRLILKNNPKSVEFQMRILERSGL 136 (496)
Q Consensus 102 ~~v~~~~~~e~~~~~~~~~~~~~~f~~~i~~~sGi 136 (496)
++|+-+.+...+.....-+++++....+++++.|+
T Consensus 11 ~~V~g~~ier~~~~~~~~~~e~~~~f~~~L~~~Gv 45 (69)
T TIGR03595 11 FVVSGKKIERWVAKTPFNNDENLRRFARKLKKLGV 45 (69)
T ss_pred EEEechHHHHHHHHcCCCCHHHHHHHHHHHHHCCH
Confidence 34555555555444332256677777788888775
No 283
>COG3053 CitC Citrate lyase synthetase [Energy production and conversion]
Probab=24.03 E-value=4.4e+02 Score=27.06 Aligned_cols=106 Identities=11% Similarity=0.155 Sum_probs=61.4
Q ss_pred CCCceEEEEeeeecCCCCcccChHHHHHHHhhhhcCCcchHHHHHHHHHHcCCCceeecCCCCcCCCCCCchHHHHHhHH
Q 011007 84 KPRHVYLVDYACYKPPVTCRVPFATFMEHSRLILKNNPKSVEFQMRILERSGLGEETCLPPAIHYIPPTPTMEAARGEAE 163 (496)
Q Consensus 84 ~~~~v~Iv~~~~y~P~~~~~v~~~~~~e~~~~~~~~~~~~~~f~~~i~~~sGi~~r~~~~~~~~~~~~~~~~~~~~~ea~ 163 (496)
....-||++.++| |. +-+..+........ .+| -.=|-++|....||.+|.+-.+... .. .
T Consensus 209 HsgsdYiISrATF-P~--YFiKeq~vv~~s~t--~iD--l~iFr~~iA~aLgIThRfVG~EP~c-----~v--------T 268 (352)
T COG3053 209 HSGSDYIISRATF-PA--YFIKEQSVVNDSQT--EID--LKIFRKYIAPALGITHRFVGTEPFC-----RV--------T 268 (352)
T ss_pred ecCCCeEEEeccc-ch--hhhhhHHHHHHHHH--HHH--HHHHHHHHHHHhCcceeeecCCCCc-----HH--------H
Confidence 3456889999888 66 44444444433321 011 1124455778899999887544322 11 1
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcC
Q 011007 164 LVIFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYK 209 (496)
Q Consensus 164 ~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lg 209 (496)
..--+..++-|++++++.--|++++.--....-.|-.|+.|-..|.
T Consensus 269 ~~YNq~M~~~L~~~~~~~p~I~vvei~Rk~~~~~~ISAS~VR~~l~ 314 (352)
T COG3053 269 AIYNQQMRYWLEDPTISAPPIEVVEIERKKYQEMPISASRVRQLLA 314 (352)
T ss_pred HHHHHHHHHHHhccCCCCCceEEEEeehhhhcCCcccHHHHHHHHH
Confidence 1223445778888888888898888764333345545555555554
No 284
>COG2377 Predicted molecular chaperone distantly related to HSP70-fold metalloproteases [Posttranslational modification, protein turnover, chaperones]
Probab=23.91 E-value=1.4e+02 Score=31.39 Aligned_cols=67 Identities=15% Similarity=0.248 Sum_probs=46.5
Q ss_pred chHHHHHhHHHHHHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCC----------cHHHHHHHHcCCCC--CceeeEec
Q 011007 154 TMEAARGEAELVIFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTP----------SLSAMVINKYKLRS--NIKSFNLS 220 (496)
Q Consensus 154 ~~~~~~~ea~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~P----------s~a~~I~~~Lgl~~--~~~~~dl~ 220 (496)
.+.+.+++-..+-..|+..++++.++.|+||+.|.+...+-...| ....+|+++.|++. |.++=|+.
T Consensus 63 ~~~~l~~~l~~~~a~av~~ll~~~~l~~~~i~~iG~HGQTV~H~p~~~~~~t~Qlgd~~~iA~~TGi~~v~dfR~~D~a 141 (371)
T COG2377 63 ELAELDRALALLHAQAVAALLAEQGLLPRDIRAIGCHGQTVLHRPPGHAPDTVQLGDGPLIAELTGITVVGDFRRRDMA 141 (371)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHhCceeecCCccccCCCCCCCCceeecCchHHHHHHhCCccHhhhcccccc
Confidence 345566667778889999999999999999997765433322111 35788999999873 33444554
No 285
>PTZ00400 DnaK-type molecular chaperone; Provisional
Probab=23.66 E-value=1.3e+02 Score=34.14 Aligned_cols=45 Identities=13% Similarity=0.313 Sum_probs=36.1
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCC
Q 011007 166 IFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLR 211 (496)
Q Consensus 166 a~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~ 211 (496)
....++++|+++|+++++||.|+..... ...|.+-.+|.+.+|..
T Consensus 350 ~~~~i~~~L~~a~~~~~~i~~ViLvGGs-sriP~v~~~l~~~f~~~ 394 (663)
T PTZ00400 350 TIEPCEKCIKDAGVKKDELNDVILVGGM-TRMPKVSETVKKIFGKE 394 (663)
T ss_pred HHHHHHHHHHHcCCCHHHCcEEEEECCc-cCChHHHHHHHHHhCCC
Confidence 4566789999999999999999866322 35788999999999864
No 286
>KOG1390 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=23.57 E-value=86 Score=32.38 Aligned_cols=80 Identities=19% Similarity=0.165 Sum_probs=53.4
Q ss_pred hccccEEEeccCCHHHHHHHHHHcCCChhhHhhhhhhhcccCC---ccCCchHHHHHHHHHhCCCCCCCE-EEEEeechh
Q 011007 382 KQAFEHFCIHAGGRAVIDELQKNLQLSAEHVEASRMTLHRFGN---TSSSSLWYEMSYIEEKGRMKKGDR-VWQIAFGSG 457 (496)
Q Consensus 382 ~~did~f~~H~~~~~v~~~i~~~Lgl~~e~~~~S~~~l~r~GN---tsSaSi~~~La~~~~~g~i~~Gd~-Vll~~fG~G 457 (496)
.+|+|+|=++-.-..+--...+.||++|+++.. .-----.|| +|.+.+...|.+.+++. .|.+ |.-+.-|.|
T Consensus 311 ~sdVd~~EiNEAFs~v~lA~iK~LgldP~kVNv-~GGAValGHPlG~SGaRi~~tL~~~L~~~---~g~~GvAaiCnGGG 386 (396)
T KOG1390|consen 311 QSDVDYWEINEAFSVVVLANIKKLGLDPSKVNV-HGGAVALGHPLGMSGARILVTLLHTLEQK---GGKIGVAAICNGGG 386 (396)
T ss_pred hhhhhHHhhhhhhhHHHHHHHHHhCCCHhhccC-CCceeecCCCcCCcchhHHHHHHHHHHhh---CCceeEEEEecCCC
Confidence 489999988888888888889999999999842 000112565 67788999999998861 2232 334455555
Q ss_pred HhhhheeeE
Q 011007 458 FKCNSAVWK 466 (496)
Q Consensus 458 ~~~~sav~r 466 (496)
.. .+++++
T Consensus 387 ga-sa~vie 394 (396)
T KOG1390|consen 387 GA-SAMVIE 394 (396)
T ss_pred ce-eeEEEe
Confidence 43 344444
No 287
>PLN02854 3-ketoacyl-CoA synthase
Probab=23.34 E-value=3.5e+02 Score=29.97 Aligned_cols=42 Identities=12% Similarity=0.213 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHcCCCc------CCcCEEEeeccCCCCCCcHHHHHHHHcCCC
Q 011007 166 IFSAMDSLLQKTGLKP------KDIDILIVNCSLFSPTPSLSAMVINKYKLR 211 (496)
Q Consensus 166 a~~Aa~~aL~~agi~p------~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~ 211 (496)
+...+++.|.++|+++ +|||+.+.... ....-..|+++||++
T Consensus 387 ~~~~i~~~L~~~gl~~~~pd~~~didhf~iHqg----gr~IId~v~k~LgL~ 434 (521)
T PLN02854 387 FVTLVRRKLLKAKVKPYIPDFKLAFEHFCIHAG----GRAVLDELQKNLQLS 434 (521)
T ss_pred HHHHHHHHHHHcCCCccCCcccccCcEEEECCC----CHHHHHHHHHHcCCC
Confidence 5678899999999987 68998764422 234556789999997
No 288
>PRK13411 molecular chaperone DnaK; Provisional
Probab=23.10 E-value=2.2e+02 Score=32.38 Aligned_cols=46 Identities=24% Similarity=0.382 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCC
Q 011007 164 LVIFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKL 210 (496)
Q Consensus 164 ~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl 210 (496)
+=....++++|+++++++++||.|+.+... ...|.+-.+|.+.+|-
T Consensus 308 ~~~~~~i~~~L~~a~~~~~~id~ViLvGGs-sriP~v~~~l~~~f~~ 353 (653)
T PRK13411 308 EATIEPMQQALKDAGLKPEDIDRVILVGGS-TRIPAVQEAIQKFFGG 353 (653)
T ss_pred HHHHHHHHHHHHHcCCCHHHCcEEEEECCC-CCcchHHHHHHHHcCC
Confidence 335667889999999999999988866322 3578888999999974
No 289
>cd01453 vWA_transcription_factor_IIH_type Transcription factors IIH type: TFIIH is a multiprotein complex that is one of the five general transcription factors that binds RNA polymerase II holoenzyme. Orthologues of these genes are found in all completed eukaryotic genomes and all these proteins contain a VWA domain. The p44 subunit of TFIIH functions as a DNA helicase in RNA polymerase II transcription initiation and DNA repair, and its transcriptional activity is dependent on its C-terminal Zn-binding domains. The function of the vWA domain is unclear, but may be involved in complex assembly. The MIDAS motif is not conserved in this sub-group.
Probab=22.95 E-value=2.2e+02 Score=26.46 Aligned_cols=81 Identities=12% Similarity=0.160 Sum_probs=46.0
Q ss_pred HHHHHHHHHHHc--CCCcCCcCEEEe-eccCCCCCC--cHHHHHHHHcCCCCCceeeEecCCCcchHHHHHHHHHHHHhc
Q 011007 166 IFSAMDSLLQKT--GLKPKDIDILIV-NCSLFSPTP--SLSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLLQV 240 (496)
Q Consensus 166 a~~Aa~~aL~~a--gi~p~dID~LI~-~ss~~~~~P--s~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL~~ 240 (496)
+..++++.+++- .-.-+.|+++++ +.+.....| +....+...|.- . .... |=.+.-.||..|.++++.
T Consensus 29 ak~~~~~fi~~~~~~~~~~~vglv~f~~~~a~~~~PlT~D~~~~~~~L~~---~--~~~~--G~t~l~~aL~~A~~~l~~ 101 (183)
T cd01453 29 VLKLLELFIEEFFDQNPISQLGIISIKNGRAEKLTDLTGNPRKHIQALKT---A--RECS--GEPSLQNGLEMALESLKH 101 (183)
T ss_pred HHHHHHHHHHHHhhcCccccEEEEEEcCCccEEEECCCCCHHHHHHHhhc---c--cCCC--CchhHHHHHHHHHHHHhc
Confidence 445555555442 222356999999 555443333 222345555431 1 1122 446788999999999975
Q ss_pred CC---CCEEEEEEECC
Q 011007 241 HP---NSNAVVVSTEI 253 (496)
Q Consensus 241 ~~---~~~aLVVs~E~ 253 (496)
.+ .++++|+.++.
T Consensus 102 ~~~~~~~~iiil~sd~ 117 (183)
T cd01453 102 MPSHGSREVLIIFSSL 117 (183)
T ss_pred CCccCceEEEEEEcCC
Confidence 32 35678887663
No 290
>PF12244 DUF3606: Protein of unknown function (DUF3606); InterPro: IPR022037 This family of proteins is found in bacteria. Proteins in this family are typically between 58 and 85 amino acids in length. There is a single completely conserved residue G that may be functionally important.
Probab=22.23 E-value=64 Score=24.43 Aligned_cols=30 Identities=17% Similarity=0.276 Sum_probs=25.2
Q ss_pred CHHHHHHHHHHcCCChhhHhhhhhhhcccCCcc
Q 011007 394 GRAVIDELQKNLQLSAEHVEASRMTLHRFGNTS 426 (496)
Q Consensus 394 ~~~v~~~i~~~Lgl~~e~~~~S~~~l~r~GNts 426 (496)
...=++.+++.||++++++ +.-+.+.||..
T Consensus 19 e~~ev~ywa~~~gvt~~~L---~~AV~~vG~~~ 48 (57)
T PF12244_consen 19 EPYEVRYWAKRFGVTEEQL---REAVRAVGNSR 48 (57)
T ss_pred CHHHHHHHHHHHCcCHHHH---HHHHHHHCcCH
Confidence 3466788999999999999 67899999863
No 291
>PTZ00009 heat shock 70 kDa protein; Provisional
Probab=22.04 E-value=2.6e+02 Score=31.78 Aligned_cols=64 Identities=6% Similarity=0.206 Sum_probs=43.7
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCCceeeEecCCCcchHHHHHH
Q 011007 166 IFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISID 232 (496)
Q Consensus 166 a~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~ 232 (496)
....++++|+++++++++||.|++... ....|.+-.+|.+.+|-.. ...+++..-|.+.-.|+.
T Consensus 315 ~~~~i~~~L~~a~~~~~~i~~ViLvGG-ssriP~v~~~i~~~f~~~~--~~~~~npdeaVA~GAa~~ 378 (653)
T PTZ00009 315 TLQPVEKVLKDAGMDKRSVHEVVLVGG-STRIPKVQSLIKDFFNGKE--PCKSINPDEAVAYGAAVQ 378 (653)
T ss_pred HHHHHHHHHHHcCCCHHHCcEEEEECC-CCCChhHHHHHHHHhCCCC--CCCCCCcchHHhhhhhhh
Confidence 445688999999999999999986643 2357888899999997431 233444334444444444
No 292
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=21.28 E-value=51 Score=39.73 Aligned_cols=123 Identities=21% Similarity=0.284 Sum_probs=78.8
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCE----EEeecc-CC-----CCCC----------cHHHHHHHHcCCC--CCceeeEec
Q 011007 163 ELVIFSAMDSLLQKTGLKPKDIDI----LIVNCS-LF-----SPTP----------SLSAMVINKYKLR--SNIKSFNLS 220 (496)
Q Consensus 163 ~~la~~Aa~~aL~~agi~p~dID~----LI~~ss-~~-----~~~P----------s~a~~I~~~Lgl~--~~~~~~dl~ 220 (496)
..|..+|.-+++-++||+|.+... +.+.|| +. .-.| ..-+|.+|++... =.-++|.+.
T Consensus 88 ~RlLLE~t~EAivDaGiNP~~LRGs~tGv~vg~s~seTs~~~~~dp~t~~Gy~mtgc~raMfaNRiSytFDfqGPS~s~D 167 (2376)
T KOG1202|consen 88 LRLLLEATWEAIVDAGINPDDLRGSRTGVFVGVSGSETSGALSQDPDTVNGYSMTGCVRAMFANRISYTFDFQGPSFSVD 167 (2376)
T ss_pred HHHHHHHHHHHHHhCCCChhhcCcccceeEEeecCccccccccCCCccccceeecccHHHHhhcceeEEEeccCCchhhh
Confidence 457889999999999999977532 233332 11 1111 2235666664311 123577777
Q ss_pred CCCcchHHHHHHHHHHHHhcCCCCEEEEEEECCCCCC----------Ccc--CC----CccccccccccccccEEEEEec
Q 011007 221 GMGCSAGLISIDLARDLLQVHPNSNAVVVSTEIITPN----------YYQ--GN----ERAMLLPNCLFRMGGAAILLSN 284 (496)
Q Consensus 221 g~gCsg~l~al~lA~~lL~~~~~~~aLVVs~E~~s~~----------~~~--~~----dr~~l~~~~lfgDGAaA~lLs~ 284 (496)
.+|++.+.||+.|.+-++.+...+|+|-++..+-.. +.. |. |.+ -....=.||.+|++|.+
T Consensus 168 -tacsSsl~al~~a~~~~r~gqcd~AiVaG~~liLkPt~slQFlRLgmls~dGsCkaFDea--gnGY~Rseg~~avllqr 244 (2376)
T KOG1202|consen 168 -TACSSSLMALQNAFQDIRSGQCDAAIVAGANLILKPTTSLQFLRLGMLSPDGSCKAFDEA--GNGYCRSEGVVAVLLQR 244 (2376)
T ss_pred -hhhHHHHHHHHHHHHhhhccCCchhhhcccceEeccchhhHHHHhcCcCCCCcccchhcc--CCceeecCceEEEEEeh
Confidence 699999999999999999999999998887765321 110 11 111 01234469999999998
Q ss_pred cCCc
Q 011007 285 RRRN 288 (496)
Q Consensus 285 ~~~~ 288 (496)
+...
T Consensus 245 k~~A 248 (2376)
T KOG1202|consen 245 KSLA 248 (2376)
T ss_pred hHHH
Confidence 7643
No 293
>PRK08329 threonine synthase; Validated
Probab=21.15 E-value=75 Score=32.96 Aligned_cols=64 Identities=23% Similarity=0.331 Sum_probs=43.7
Q ss_pred HHHHHHHHH----cCCChhhHhhhhhhhcccCC---ccCCchHHHHHHHHHhCCCCCCCEEEEEeechhHh
Q 011007 396 AVIDELQKN----LQLSAEHVEASRMTLHRFGN---TSSSSLWYEMSYIEEKGRMKKGDRVWQIAFGSGFK 459 (496)
Q Consensus 396 ~v~~~i~~~----Lgl~~e~~~~S~~~l~r~GN---tsSaSi~~~La~~~~~g~i~~Gd~Vll~~fG~G~~ 459 (496)
..++.+.+. ..++++++......+.+.|- .+|+..+..+..+.++|.+++|++|+++--|.|++
T Consensus 275 ~~~~~l~~~~g~~~~V~d~e~~~a~~~l~~~Gi~vepssa~a~Aa~~~l~~~g~i~~~~~Vv~~~TG~glK 345 (347)
T PRK08329 275 EMLRALEESNGFCISVGEEETRAALHWLRRMGFLVEPTSAVALAAYWKLLEEGLIEGGSKVLLPLSGSGLK 345 (347)
T ss_pred HHHHHHHHhCCEEEEECHHHHHHHHHHHHhcCceECccHHHHHHHHHHHHHhCCCCCCCeEEEEeCCCCcc
Confidence 345555554 45677666443334444332 34666777777888899999999999999999976
No 294
>KOG1794 consensus N-Acetylglucosamine kinase [Carbohydrate transport and metabolism]
Probab=20.91 E-value=5.4e+02 Score=26.45 Aligned_cols=129 Identities=14% Similarity=0.146 Sum_probs=70.9
Q ss_pred HHcCCCceeecCCCCcCCCCCCchHHHHHhHHHHHHHHHHHHHHHcCCCcCC-cCEEEee-ccCCCCCCcHHHHHHHHcC
Q 011007 132 ERSGLGEETCLPPAIHYIPPTPTMEAARGEAELVIFSAMDSLLQKTGLKPKD-IDILIVN-CSLFSPTPSLSAMVINKYK 209 (496)
Q Consensus 132 ~~sGi~~r~~~~~~~~~~~~~~~~~~~~~ea~~la~~Aa~~aL~~agi~p~d-ID~LI~~-ss~~~~~Ps~a~~I~~~Lg 209 (496)
+.+|.++-||+-+.. +..+=..++++++++|+|+++++ +..|.+. +..+. |+.-..+.+.+.
T Consensus 29 ~a~~~~Tnh~~ig~~--------------~~~~rie~~i~~A~~k~g~d~~~~lr~lgL~lSg~d~--e~~~~~lv~~~R 92 (336)
T KOG1794|consen 29 RAVGGGTNHWLIGST--------------TCASRIEDMIREAKEKAGWDKKGPLRSLGLGLSGTDQ--EDKNRKLVTEFR 92 (336)
T ss_pred EeeccccccccCCch--------------HHHHHHHHHHHHHHhhcCCCccCccceeeeecccCCc--hhHHHHHHHHHH
Confidence 335666666654422 13344567788999999999999 8888766 33333 333333444332
Q ss_pred --CCCCceeeEecCCCcchHHHHHHHHHHHHhcC---CCCEEEEEEECCCCCCCc-cCCCccccccccccccccEEEEEe
Q 011007 210 --LRSNIKSFNLSGMGCSAGLISIDLARDLLQVH---PNSNAVVVSTEIITPNYY-QGNERAMLLPNCLFRMGGAAILLS 283 (496)
Q Consensus 210 --l~~~~~~~dl~g~gCsg~l~al~lA~~lL~~~---~~~~aLVVs~E~~s~~~~-~~~dr~~l~~~~lfgDGAaA~lLs 283 (496)
.+..+..|-+.. +....+...- .+..||+-++....+-.. +++...-=......|||+.|.-++
T Consensus 93 ~~fps~ae~~~v~s----------Da~~sl~a~t~g~~~GiVLiaGTgs~crl~~~DGs~~~~ggwg~~iGd~GSaywia 162 (336)
T KOG1794|consen 93 DKFPSVAENFYVTS----------DADGSLAAATPGGEGGIVLIAGTGSNCRLVNPDGSEKGAGGWGHMIGDGGSAYWIA 162 (336)
T ss_pred Hhccchhheeeeeh----------hHHHHHhhcCCCCCCcEEEEecCCceeEEECCCCCccCCCCCCCccCCCcchhhhh
Confidence 222345566663 2222222222 356788888877654221 222211001235789999998877
Q ss_pred ccC
Q 011007 284 NRR 286 (496)
Q Consensus 284 ~~~ 286 (496)
+..
T Consensus 163 ~~A 165 (336)
T KOG1794|consen 163 RQA 165 (336)
T ss_pred hhh
Confidence 644
No 295
>TIGR03844 cysteate_syn cysteate synthase. Members of this family are cysteate synthase, an enzyme of alternate pathway to sulfopyruvate, a precursor of coenzyme M.
Probab=20.40 E-value=2.1e+02 Score=30.41 Aligned_cols=65 Identities=17% Similarity=0.164 Sum_probs=46.5
Q ss_pred HHHHHHHHHcC----CChhhHhhhhhhhcc-cCC---ccCCchHHHHHHHHHhCCCCCCCEEEEEeechhHhh
Q 011007 396 AVIDELQKNLQ----LSAEHVEASRMTLHR-FGN---TSSSSLWYEMSYIEEKGRMKKGDRVWQIAFGSGFKC 460 (496)
Q Consensus 396 ~v~~~i~~~Lg----l~~e~~~~S~~~l~r-~GN---tsSaSi~~~La~~~~~g~i~~Gd~Vll~~fG~G~~~ 460 (496)
.+++.+.+.-| ++++.+......+.+ -|. .+||..+-.|..+.++|.+++|++|+++--|.|++-
T Consensus 310 ~~l~air~~~g~~v~Vsd~eI~~A~~~l~~~~gi~vEpa~A~alAal~k~~~~g~i~~~~~Vv~vlTG~glK~ 382 (398)
T TIGR03844 310 GVFDALIATGGQMYGVSNKEAVSAGKLFEESEGIDILPAAAVAVAALVKAVESGFIGPDDDILLNITGGGYKR 382 (398)
T ss_pred HHHHHHHHhCCEEEEECHHHHHHHHHHHHhhCCccccccHHHHHHHHHHHHHhCCCCCCCeEEEEECCcchhh
Confidence 45777776555 688888766656553 555 455555666666667889999999999999999763
Done!