Query 011007
Match_columns 496
No_of_seqs 291 out of 1991
Neff 7.1
Searched_HMMs 29240
Date Mon Mar 25 18:52:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011007.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011007hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4ewp_A 3-oxoacyl-[acyl-carrier 100.0 1.8E-56 6E-61 460.5 26.6 324 83-467 9-349 (350)
2 3e1h_A PKSIIINC, putative unch 100.0 8.6E-53 2.9E-57 447.3 31.3 369 84-490 28-425 (465)
3 3il6_A 3-oxoacyl-[acyl-carrier 100.0 4.4E-52 1.5E-56 423.5 32.3 316 86-467 3-321 (321)
4 3euo_A Type III pentaketide sy 100.0 1.3E-51 4.4E-56 429.2 31.2 351 87-467 2-378 (379)
5 3gwa_A 3-oxoacyl-(acyl-carrier 100.0 1.5E-51 5E-56 426.8 31.3 328 85-467 28-365 (365)
6 3il3_A 3-oxoacyl-[acyl-carrier 100.0 1.4E-51 4.7E-56 420.3 29.1 310 86-467 8-323 (323)
7 3oit_A OS07G0271500 protein; t 100.0 3.4E-51 1.2E-55 427.1 30.9 349 85-468 8-382 (387)
8 3ov2_A Curcumin synthase; type 100.0 6.7E-51 2.3E-55 425.7 32.0 350 84-469 13-388 (393)
9 4dfe_A 3-oxoacyl-[acyl-carrier 100.0 1.2E-50 4.1E-55 414.6 30.5 319 86-467 10-333 (333)
10 4efi_A 3-oxoacyl-(acyl-carrier 100.0 5.7E-51 2E-55 420.7 23.7 326 86-470 15-346 (354)
11 3v7i_A Putative polyketide syn 100.0 5.7E-50 1.9E-54 420.2 29.4 353 79-468 18-413 (413)
12 2h84_A Steely1; thiolase-fold, 100.0 3.1E-49 1.1E-53 409.9 33.0 355 81-468 7-373 (374)
13 3h78_A PQS biosynthetic enzyme 100.0 1.4E-49 4.8E-54 411.1 27.7 326 85-471 23-355 (359)
14 1i88_A CHS2, chalcone synthase 100.0 2.1E-48 7.2E-53 406.3 32.4 350 83-468 12-387 (389)
15 3awk_A Chalcone synthase-like 100.0 3.4E-48 1.2E-52 406.4 32.3 349 84-468 26-400 (402)
16 2p0u_A Stilbenecarboxylate syn 100.0 4.2E-48 1.4E-52 407.1 31.5 349 84-468 31-405 (413)
17 3s21_A 3-oxoacyl-[ACP] synthas 100.0 4.8E-48 1.7E-52 397.3 28.9 318 85-467 10-345 (345)
18 3a5r_A Benzalacetone synthase; 100.0 1.5E-47 5.1E-52 399.6 32.3 348 87-470 12-385 (387)
19 1ted_A PKS18; thiolase fold, s 100.0 8.5E-48 2.9E-52 402.1 28.0 346 88-469 33-392 (393)
20 1xes_A Dihydropinosylvin synth 100.0 2.2E-47 7.4E-52 401.7 31.1 350 83-468 34-410 (413)
21 1ee0_A 2-pyrone synthase; poly 100.0 4.2E-47 1.4E-51 398.2 31.5 353 85-472 19-396 (402)
22 3led_A 3-oxoacyl-acyl carrier 100.0 4.3E-47 1.5E-51 396.6 29.5 340 85-468 22-392 (392)
23 2d3m_A Pentaketide chromone sy 100.0 1.1E-46 3.6E-51 395.5 31.0 353 83-468 25-403 (406)
24 1u0m_A Putative polyketide syn 100.0 2.1E-46 7.1E-51 390.3 29.9 341 88-470 10-357 (382)
25 3s3l_A CERJ; acyltransferase, 100.0 5.1E-45 1.8E-49 376.6 27.1 332 85-470 3-341 (357)
26 2x3e_A 3-oxoacyl-[acyl-carrier 100.0 1.5E-44 5.3E-49 368.7 28.9 319 87-472 5-328 (331)
27 1mzj_A Beta-ketoacylsynthase I 100.0 3.3E-44 1.1E-48 367.5 27.0 312 86-469 10-333 (339)
28 1hnj_A Beta-ketoacyl-acyl carr 100.0 1.3E-43 4.3E-48 359.3 28.1 309 87-467 2-317 (317)
29 3tsy_A Fusion protein 4-coumar 100.0 7.9E-43 2.7E-47 402.5 31.5 350 85-472 601-978 (979)
30 1zow_A 3-oxoacyl-[acyl-carrier 100.0 2E-42 6.8E-47 349.7 28.2 307 87-467 2-311 (313)
31 3v4n_A HMG-COA synthase; hydro 100.0 4.8E-43 1.7E-47 365.4 20.7 304 86-472 6-329 (388)
32 2ebd_A 3-oxoacyl-[acyl-carrier 100.0 1.8E-41 6.3E-46 341.8 30.6 306 87-467 2-309 (309)
33 1u6e_A 3-oxoacyl-[acyl-carrier 100.0 5.4E-42 1.8E-46 349.8 26.7 309 87-467 12-332 (335)
34 2p8u_A Hydroxymethylglutaryl-C 100.0 6.8E-43 2.3E-47 373.2 19.9 325 79-470 16-399 (478)
35 3sqz_A Putative hydroxymethylg 100.0 4.5E-43 1.6E-47 368.9 16.6 303 86-471 35-358 (425)
36 2v4w_A Hydroxymethylglutaryl-C 100.0 3.2E-42 1.1E-46 364.0 23.0 315 83-470 1-380 (460)
37 2f82_A HMG-COA synthase; HMGS1 100.0 6.1E-42 2.1E-46 363.9 24.4 318 85-470 1-372 (450)
38 1ub7_A 3-oxoacyl-[acyl-carrier 100.0 3.1E-41 1.1E-45 342.5 28.1 308 88-467 2-319 (322)
39 1xpm_A 3-hydroxy-3-methylgluta 100.0 8.9E-42 3E-46 357.1 22.0 308 87-472 2-323 (396)
40 2wya_A Hydroxymethylglutaryl-C 100.0 1.1E-40 3.8E-45 355.1 20.5 328 84-472 2-382 (460)
41 3lma_A Stage V sporulation pro 99.9 1.7E-21 5.7E-26 197.4 19.5 242 161-462 54-315 (347)
42 4e1l_A Acetoacetyl-COA thiolas 99.7 3.6E-17 1.2E-21 170.6 20.4 94 162-256 29-123 (395)
43 3ss6_A Acetyl-COA acetyltransf 99.7 3.5E-17 1.2E-21 170.7 17.7 94 162-256 29-123 (394)
44 4dd5_A Acetyl-COA acetyltransf 99.7 7.3E-17 2.5E-21 168.4 17.9 94 162-256 31-125 (396)
45 3o04_A LMO2201 protein, beta-k 99.7 1.3E-15 4.3E-20 159.7 23.5 251 162-468 74-411 (413)
46 1tqy_A Beta-ketoacyl synthase/ 99.7 1.4E-15 4.7E-20 160.0 23.2 252 162-468 73-417 (424)
47 2gqd_A 3-oxoacyl-[acyl-carrier 99.7 1.3E-15 4.5E-20 160.9 22.5 321 82-467 24-434 (437)
48 3ho9_A 3-oxoacyl-[acyl-carrier 99.7 1.8E-15 6.1E-20 159.3 21.5 318 83-467 15-426 (427)
49 1j3n_A 3-oxoacyl-(acyl-carrier 99.7 2.6E-15 9E-20 157.0 20.7 250 162-466 71-406 (408)
50 3goa_A 3-ketoacyl-COA thiolase 99.7 2.3E-15 7.9E-20 156.5 18.7 94 162-256 27-123 (387)
51 1e5m_A KAS II, beta ketoacyl a 99.6 1.2E-14 4E-19 152.5 22.2 318 86-466 7-413 (416)
52 3kzu_A 3-oxoacyl-(acyl-carrier 99.6 9.2E-15 3.2E-19 154.0 20.4 249 162-467 87-425 (428)
53 2iik_A 3-ketoacyl-COA thiolase 99.6 1.6E-15 5.5E-20 159.3 14.2 135 98-256 11-149 (418)
54 3svk_A Acetyl-COA acetyltransf 99.6 2.9E-15 1E-19 156.8 15.6 94 162-256 32-128 (407)
55 1ox0_A Beta ketoacyl-acyl carr 99.6 7.5E-14 2.6E-18 147.0 23.4 317 84-467 21-426 (430)
56 2gp6_A 3-oxoacyl-[acyl-carrier 99.6 2.2E-13 7.6E-18 143.7 26.7 318 84-466 26-432 (434)
57 2iwz_A 3-oxoacyl-[acyl-carrier 99.6 8.8E-14 3E-18 146.9 22.1 316 86-466 21-436 (438)
58 1tqy_B Actinorhodin polyketide 99.6 1.2E-13 4E-18 144.8 22.2 310 84-468 7-411 (415)
59 1ulq_A Putative acetyl-COA ace 99.6 4.9E-14 1.7E-18 147.1 19.2 94 162-256 26-121 (401)
60 4ewg_A Beta-ketoacyl synthase; 99.6 4.2E-14 1.4E-18 148.1 18.5 313 86-467 6-410 (412)
61 2vu1_A Acetyl-COA acetyltransf 99.6 8.7E-14 3E-18 144.8 18.7 94 162-256 27-121 (392)
62 2vba_A 3-oxoacyl-[acyl-carrier 99.5 2.5E-13 8.7E-18 141.9 21.2 311 86-467 2-403 (406)
63 1wl4_A Acetyl-coenzyme A acety 99.5 1.9E-13 6.4E-18 142.5 19.0 94 162-256 30-124 (397)
64 1afw_A 3-ketoacetyl-COA thiola 99.5 2.8E-13 9.7E-18 141.1 18.8 93 162-255 35-132 (393)
65 3mqd_A Beta-ketoacyl synthase; 99.5 3.6E-13 1.2E-17 141.7 18.9 313 86-467 23-425 (428)
66 4ddo_A 3-oxoacyl-[acyl-carrier 99.5 4.8E-13 1.6E-17 141.8 19.8 314 86-468 24-442 (451)
67 2wu9_A 3-ketoacyl-COA thiolase 99.5 3.4E-13 1.2E-17 142.5 17.5 94 162-256 55-150 (442)
68 2ib8_A Acetyl-COA acetyltransf 99.5 9.1E-13 3.1E-17 137.2 19.9 94 162-256 32-126 (395)
69 1wdk_C 3-ketoacyl-COA thiolase 99.5 4.2E-13 1.4E-17 139.6 17.2 94 162-256 30-126 (390)
70 2wge_A 3-oxoacyl-[acyl-carrier 99.5 2.2E-12 7.5E-17 135.3 22.6 314 85-466 11-414 (416)
71 2ix4_A 3-oxoacyl-[acyl-carrier 99.4 1.8E-12 6.3E-17 136.5 18.5 253 162-466 88-429 (431)
72 2qo3_A Eryaii erythromycin pol 99.4 1.3E-11 4.5E-16 141.0 22.2 251 162-468 95-431 (915)
73 2hg4_A DEBS, 6-deoxyerythronol 99.3 9.6E-11 3.3E-15 134.0 24.8 254 162-468 116-453 (917)
74 3hhd_A Fatty acid synthase; tr 99.3 2.2E-10 7.6E-15 131.6 23.9 316 85-468 3-409 (965)
75 4egv_A Acetyl-COA acetyltransf 99.0 3.5E-09 1.2E-13 114.0 14.4 93 162-256 42-147 (520)
76 3zen_D Fatty acid synthase; tr 98.7 2.1E-07 7.1E-12 116.7 16.4 121 161-286 2646-2826(3089)
77 2vz8_A Fatty acid synthase; tr 98.1 0.00041 1.4E-08 87.0 27.4 250 162-468 78-407 (2512)
78 2pff_A Fatty acid synthase sub 97.8 2.6E-05 8.9E-10 91.4 8.2 121 162-286 1012-1192(1688)
79 2uv8_A Fatty acid synthase sub 97.2 0.001 3.5E-08 80.3 11.6 122 162-286 1211-1391(1887)
80 2uv9_A Fatty acid synthase alp 97.0 0.0023 7.8E-08 77.1 11.9 122 162-286 1186-1366(1878)
81 3il3_A 3-oxoacyl-[acyl-carrier 94.2 0.17 5.7E-06 50.5 9.7 85 160-251 220-310 (323)
82 3lma_A Stage V sporulation pro 94.1 0.074 2.5E-06 53.7 6.8 116 162-288 205-337 (347)
83 1mzj_A Beta-ketoacylsynthase I 93.7 0.25 8.5E-06 49.3 9.8 82 162-250 229-317 (339)
84 2x3e_A 3-oxoacyl-[acyl-carrier 93.6 0.2 7E-06 49.8 9.0 82 162-250 222-309 (331)
85 4ewp_A 3-oxoacyl-[acyl-carrier 93.6 0.16 5.4E-06 51.0 8.2 87 160-250 245-335 (350)
86 3h78_A PQS biosynthetic enzyme 93.2 0.23 8E-06 50.3 8.7 84 161-250 251-337 (359)
87 3s21_A 3-oxoacyl-[ACP] synthas 93.2 0.32 1.1E-05 48.8 9.6 90 159-252 241-333 (345)
88 1u6e_A 3-oxoacyl-[acyl-carrier 93.1 0.35 1.2E-05 47.9 9.8 86 162-251 230-319 (335)
89 3gwa_A 3-oxoacyl-(acyl-carrier 93.1 0.25 8.7E-06 50.1 8.8 84 161-251 263-352 (365)
90 4efi_A 3-oxoacyl-(acyl-carrier 92.8 0.23 7.8E-06 50.2 7.9 86 160-251 240-330 (354)
91 4dfe_A 3-oxoacyl-[acyl-carrier 92.7 0.36 1.2E-05 48.1 9.2 83 161-250 231-319 (333)
92 1zow_A 3-oxoacyl-[acyl-carrier 92.7 0.42 1.4E-05 46.9 9.5 82 162-250 210-297 (313)
93 1hnj_A Beta-ketoacyl-acyl carr 92.3 0.52 1.8E-05 46.3 9.6 84 162-252 216-305 (317)
94 1ub7_A 3-oxoacyl-[acyl-carrier 92.0 0.5 1.7E-05 46.6 9.2 68 162-233 218-288 (322)
95 2ebd_A 3-oxoacyl-[acyl-carrier 92.0 0.54 1.9E-05 45.9 9.4 83 162-251 208-296 (309)
96 3s3l_A CERJ; acyltransferase, 92.0 0.28 9.4E-06 49.7 7.3 70 161-235 235-309 (357)
97 4e1l_A Acetoacetyl-COA thiolas 90.4 0.67 2.3E-05 47.3 8.5 76 166-248 296-379 (395)
98 1ted_A PKS18; thiolase fold, s 90.2 0.35 1.2E-05 49.4 6.2 82 162-250 285-376 (393)
99 1u0m_A Putative polyketide syn 89.8 0.28 9.6E-06 49.9 5.0 67 163-234 252-324 (382)
100 3ss6_A Acetyl-COA acetyltransf 88.4 0.78 2.7E-05 46.9 7.2 92 166-284 294-393 (394)
101 1ulq_A Putative acetyl-COA ace 88.2 1.5 5.1E-05 44.8 9.2 94 166-284 298-399 (401)
102 3svk_A Acetyl-COA acetyltransf 87.8 1.2 4.1E-05 45.8 8.1 91 167-284 308-406 (407)
103 3led_A 3-oxoacyl-acyl carrier 87.5 1.1 3.9E-05 45.8 7.7 86 159-250 286-377 (392)
104 4dd5_A Acetyl-COA acetyltransf 86.6 0.88 3E-05 46.5 6.3 92 166-284 297-396 (396)
105 2h84_A Steely1; thiolase-fold, 85.0 1.2 4.1E-05 44.9 6.3 81 162-250 265-358 (374)
106 2vu1_A Acetyl-COA acetyltransf 83.7 2 6.7E-05 43.8 7.3 76 166-248 292-375 (392)
107 1xpm_A 3-hydroxy-3-methylgluta 82.8 1.2 4.2E-05 45.4 5.3 72 160-235 203-289 (396)
108 2iik_A 3-ketoacyl-COA thiolase 82.2 2.4 8.1E-05 43.7 7.2 92 166-284 315-415 (418)
109 3tsy_A Fusion protein 4-coumar 82.1 2.7 9.2E-05 47.9 8.3 78 160-241 860-943 (979)
110 2d3m_A Pentaketide chromone sy 80.3 3.8 0.00013 41.9 7.9 69 162-235 288-366 (406)
111 4egv_A Acetyl-COA acetyltransf 80.1 3.9 0.00013 43.4 8.2 80 166-249 319-406 (520)
112 3ho9_A 3-oxoacyl-[acyl-carrier 79.5 2.1 7.3E-05 44.1 5.8 76 166-241 294-375 (427)
113 2wu9_A 3-ketoacyl-COA thiolase 78.4 4 0.00014 42.4 7.5 94 166-285 317-419 (442)
114 3goa_A 3-ketoacyl-COA thiolase 77.0 6.7 0.00023 39.7 8.6 94 166-284 284-386 (387)
115 1wl4_A Acetyl-coenzyme A acety 74.2 4.5 0.00015 41.1 6.4 76 166-248 297-380 (397)
116 1xho_A Chorismate mutase; sout 73.9 8.6 0.0003 33.6 7.0 56 167-226 54-111 (148)
117 1wdk_C 3-ketoacyl-COA thiolase 72.2 6.6 0.00023 39.8 7.1 42 166-211 287-328 (390)
118 3euo_A Type III pentaketide sy 71.7 3.7 0.00013 41.6 5.0 71 161-236 261-344 (379)
119 1tqy_A Beta-ketoacyl synthase/ 71.4 4.8 0.00017 41.2 5.9 76 166-241 285-366 (424)
120 3v4n_A HMG-COA synthase; hydro 70.9 2 6.8E-05 43.9 2.7 75 159-234 207-293 (388)
121 1xes_A Dihydropinosylvin synth 69.5 11 0.00036 38.7 7.9 70 162-236 298-374 (413)
122 3e1h_A PKSIIINC, putative unch 69.0 4.9 0.00017 42.1 5.3 71 160-235 289-372 (465)
123 3kzu_A 3-oxoacyl-(acyl-carrier 68.9 5 0.00017 41.3 5.4 45 166-211 295-340 (428)
124 3ov2_A Curcumin synthase; type 68.4 6.3 0.00022 40.1 5.9 70 162-236 275-351 (393)
125 1ee0_A 2-pyrone synthase; poly 68.3 11 0.00038 38.2 7.8 70 162-236 280-356 (402)
126 2p0u_A Stilbenecarboxylate syn 68.2 12 0.00042 38.1 8.1 70 162-236 293-369 (413)
127 1j3n_A 3-oxoacyl-(acyl-carrier 68.1 2.4 8.1E-05 43.3 2.6 77 165-241 276-358 (408)
128 3eno_A Putative O-sialoglycopr 68.1 7.1 0.00024 38.9 6.1 36 159-195 50-85 (334)
129 3r6m_A YEAZ, resuscitation pro 67.5 5.4 0.00019 37.3 4.8 52 165-220 38-94 (213)
130 1i88_A CHS2, chalcone synthase 67.3 12 0.00041 37.8 7.7 70 162-236 275-351 (389)
131 3a5r_A Benzalacetone synthase; 67.2 10 0.00035 38.3 7.2 70 162-236 271-347 (387)
132 3sqz_A Putative hydroxymethylg 67.2 3.5 0.00012 42.6 3.7 76 159-234 236-323 (425)
133 2a6a_A Hypothetical protein TM 66.7 3.7 0.00013 38.5 3.4 57 164-220 47-104 (218)
134 1dbf_A Protein (chorismate mut 65.3 14 0.00048 31.5 6.4 53 168-224 26-81 (127)
135 4ddo_A 3-oxoacyl-[acyl-carrier 64.8 4 0.00014 42.3 3.6 45 166-210 310-355 (451)
136 3awk_A Chalcone synthase-like 64.3 15 0.0005 37.4 7.7 70 162-236 288-364 (402)
137 3il6_A 3-oxoacyl-[acyl-carrier 63.5 9.6 0.00033 37.4 6.0 67 181-251 237-308 (321)
138 2gel_A Putative GRAM negative 62.2 6.6 0.00023 37.0 4.3 57 164-220 36-93 (231)
139 2gqd_A 3-oxoacyl-[acyl-carrier 61.9 5.8 0.0002 40.9 4.2 46 165-210 302-348 (437)
140 1e5m_A KAS II, beta ketoacyl a 61.4 5.7 0.00019 40.6 4.0 45 166-210 283-328 (416)
141 1ufy_A Chorismate mutase; shik 60.3 14 0.00049 31.3 5.5 54 168-225 25-81 (122)
142 2ib8_A Acetyl-COA acetyltransf 56.8 20 0.00068 36.2 7.1 50 166-221 297-346 (395)
143 2v4w_A Hydroxymethylglutaryl-C 56.7 14 0.00047 38.6 5.9 49 159-211 211-270 (460)
144 3oit_A OS07G0271500 protein; t 55.3 16 0.00054 37.1 6.0 68 162-235 268-347 (387)
145 1tqy_B Actinorhodin polyketide 55.1 5.8 0.0002 40.5 2.8 45 166-210 281-326 (415)
146 1afw_A 3-ketoacetyl-COA thiola 52.1 15 0.00053 37.1 5.4 48 166-220 295-343 (393)
147 2iwz_A 3-oxoacyl-[acyl-carrier 51.9 8.1 0.00028 39.8 3.3 46 165-210 302-348 (438)
148 1ox0_A Beta ketoacyl-acyl carr 50.8 12 0.0004 38.5 4.2 74 165-241 297-376 (430)
149 2qo3_A Eryaii erythromycin pol 48.8 28 0.00095 39.5 7.3 76 165-240 287-371 (915)
150 3o04_A LMO2201 protein, beta-k 48.6 6.3 0.00021 40.2 1.8 46 165-210 278-324 (413)
151 2f82_A HMG-COA synthase; HMGS1 48.2 31 0.0011 35.6 7.0 42 164-209 214-261 (450)
152 2ix4_A 3-oxoacyl-[acyl-carrier 48.0 7.1 0.00024 40.1 2.1 45 165-209 295-340 (431)
153 3v7i_A Putative polyketide syn 47.8 53 0.0018 33.6 8.6 78 165-250 308-398 (413)
154 2ivn_A O-sialoglycoprotein end 47.6 21 0.00072 35.2 5.4 33 162-194 47-79 (330)
155 2gp6_A 3-oxoacyl-[acyl-carrier 46.6 13 0.00045 38.2 3.9 26 165-190 303-328 (434)
156 4ewg_A Beta-ketoacyl synthase; 45.6 7.2 0.00025 39.8 1.6 47 164-210 279-326 (412)
157 3hhd_A Fatty acid synthase; tr 40.9 27 0.00091 39.9 5.5 77 165-241 270-353 (965)
158 2p8u_A Hydroxymethylglutaryl-C 39.6 33 0.0011 35.8 5.6 44 162-209 236-287 (478)
159 2hg4_A DEBS, 6-deoxyerythronol 34.7 30 0.001 39.2 4.7 76 165-240 309-393 (917)
160 2wge_A 3-oxoacyl-[acyl-carrier 33.0 24 0.00081 36.0 3.2 29 165-193 286-315 (416)
161 2dt5_A AT-rich DNA-binding pro 31.8 20 0.00069 33.2 2.2 59 398-459 31-94 (211)
162 3ven_A O-carbamoyltransferase 31.7 23 0.0008 38.0 2.9 26 167-192 53-78 (576)
163 2vt3_A REX, redox-sensing tran 27.4 18 0.0006 33.7 0.9 59 398-459 36-99 (215)
164 3qbx_A Anhydro-N-acetylmuramic 26.9 54 0.0018 33.1 4.4 57 155-211 59-123 (371)
165 4gni_A Putative heat shock pro 23.7 1.4E+02 0.0048 29.7 7.0 56 155-211 316-371 (409)
166 3qvl_A Putative hydantoin race 20.4 2.1E+02 0.0071 26.7 7.0 62 161-241 157-218 (245)
No 1
>4ewp_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; transferase; 2.20A {Micrococcus luteus nctc 2665}
Probab=100.00 E-value=1.8e-56 Score=460.46 Aligned_cols=324 Identities=20% Similarity=0.316 Sum_probs=254.6
Q ss_pred cCCCceEEEEeeeecCCCCcccChHHHHHHHhhhhcCCcchHHHHHHHHHHcCCCceeecCCCCcCCCCCCchHHHHHhH
Q 011007 83 SKPRHVYLVDYACYKPPVTCRVPFATFMEHSRLILKNNPKSVEFQMRILERSGLGEETCLPPAIHYIPPTPTMEAARGEA 162 (496)
Q Consensus 83 ~~~~~v~Iv~~~~y~P~~~~~v~~~~~~e~~~~~~~~~~~~~~f~~~i~~~sGi~~r~~~~~~~~~~~~~~~~~~~~~ea 162 (496)
.||...+|+++|+|+|+ ++|+|+|+.+.++. ++| ||.+|+||++||++.++++ +
T Consensus 9 ~~~~~srI~g~g~ylP~--~~v~n~el~~~~~~----~~e------~I~~rtGI~~R~~a~~~e~--------------~ 62 (350)
T 4ewp_A 9 ERPAASRIVAVGAYRPA--NLVPNEDLIGPIDS----SDE------WIRQRTGIVTRQRATAEET--------------V 62 (350)
T ss_dssp CCCSEEEEEEEEEECCS--CEEEHHHHTTTTTC----CHH------HHHHHHCCSEEECCCSSCC--------------H
T ss_pred cCCCCCEEEEEEEEcCC--CeEcHHHHHHHhCC----CHH------HHHhccCceEEEEcCCCCC--------------H
Confidence 47888999999999999 89999999877653 444 7999999999999988764 7
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCEEEeec-cCCCCCCcHHHHHHHHcCCCCCceeeEecCCCcchHHHHHHHHHHHHhcC
Q 011007 163 ELVIFSAMDSLLQKTGLKPKDIDILIVNC-SLFSPTPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLLQVH 241 (496)
Q Consensus 163 ~~la~~Aa~~aL~~agi~p~dID~LI~~s-s~~~~~Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL~~~ 241 (496)
.+|+++|+++||+++|++|+|||+||++| +++++.|++|++|+++||++ ++.+||++ +||+|++.||++|.++++++
T Consensus 63 ~~la~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~v~~~LGl~-~~~a~di~-~~C~g~~~aL~~A~~~i~~g 140 (350)
T 4ewp_A 63 PVMAVGAAREALERAGLQGSDLDAVIVSTVTFPHATPSAAALVAHEIGAT-PAPAYDVS-AACAGYCYGVAQADALVRSG 140 (350)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGCSEEEEECSCCSCSSSCHHHHHHHHTTCT-TSCEEEEE-CGGGHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCCchHHHHHHHhCCC-CceEEEee-cchhhHHHHHHHhhhhhhCC
Confidence 89999999999999999999999999986 46799999999999999998 67799999 79999999999999999999
Q ss_pred CCCEEEEEEECCCCCCCccCCCccccccccccccccEEEEEeccCCcccccceeEeeEEEEEecCCcccccceeecccCC
Q 011007 242 PNSNAVVVSTEIITPNYYQGNERAMLLPNCLFRMGGAAILLSNRRRNRSRAKYRLVHVVRTHKGADDKAYRCVFEEEDKE 321 (496)
Q Consensus 242 ~~~~aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAaA~lLs~~~~~~~~~~~~L~~~~~t~~~~d~~~~~~~~~~~d~~ 321 (496)
+.++||||++|.+|. +.++.||. +..+|||||+|++|++.+... +.....++|++.++.+..+...
T Consensus 141 ~~~~~Lvv~~E~~s~-~~d~~~~~---~~~lfgDGA~A~vl~~~~~~~---------~~~~~~~sdg~~~~~~~~~~~~- 206 (350)
T 4ewp_A 141 TARHVLVVGVERLSD-VVDPTDRS---ISFLLGDGAGAVIVAASDEPG---------ISPSVWGSDGERWSTISMTHSQ- 206 (350)
T ss_dssp SCSEEEEEEEEEGGG-GCCTTCTT---TGGGBCEEEEEEEEEEESSCC---------BCCCEEEECGGGTTSEEESSCH-
T ss_pred CccceeEeeeeecee-cccccccc---cccccccchheeeeecccCCC---------ccceeeeecccccceeeecCCc-
Confidence 999999999999997 45667777 578999999999999876431 1223456777777665543211
Q ss_pred CceeeeechhHHHHHHHH------------hhhhhhhcCCCccchhHHHHHHHHH---HHHhhhcc-ccCCcccchhccc
Q 011007 322 GKVGISLSKDLMAIAGEA------------LKSNITTIGPLVLPASEQLLFLMTL---IGRKIFNP-KWKPYIPDFKQAF 385 (496)
Q Consensus 322 G~~g~~ls~d~~~v~g~~------------l~~~i~~~gp~vlp~~e~~~~~~~~---~~~~v~~~-~~~~~~p~~~~di 385 (496)
.. .++........ ...++.+.|+.+ +++.... ..++++++ .++ ++||
T Consensus 207 --~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v------~~~a~~~~~~~i~~~L~~~gl~------~~di 269 (350)
T 4ewp_A 207 --LE---LRDAVEHARTTGDASAITGAEGMLWPTLRQDGPSV------FRWAVWSMAKVAREALDAAGVE------PEDL 269 (350)
T ss_dssp --HH---HHHHHHHHHHHSCCTTTTTCSSCSSCCEEECHHHH------HHHHHHTHHHHHHHHHHHHTCC------GGGE
T ss_pred --cc---cCcccccccccCCccccccccccccceeEehhHHH------HHHHHHhhhHHHHHHHHhhcCC------hhHh
Confidence 00 00000000000 000111112111 1111111 11233332 222 4899
Q ss_pred cEEEeccCCHHHHHHHHHHcCCChhhHhhhhhhhcccCCccCCchHHHHHHHHHhCCCCCCCEEEEEeechhHhhhheee
Q 011007 386 EHFCIHAGGRAVIDELQKNLQLSAEHVEASRMTLHRFGNTSSSSLWYEMSYIEEKGRMKKGDRVWQIAFGSGFKCNSAVW 465 (496)
Q Consensus 386 d~f~~H~~~~~v~~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~i~~Gd~Vll~~fG~G~~~~sav~ 465 (496)
|||++||+|+++++.+++.||++++++. ..++++||||||||+|+.|++++++|++++||+|+++|||+||+|+++||
T Consensus 270 d~~v~Hq~~~~i~~~~~~~Lgl~~~~~~--~~~l~~~GNtssasi~~~L~~~~~~g~~~~Gd~vll~~fG~G~t~~~~vl 347 (350)
T 4ewp_A 270 AAFIPHQANMRIIDEFAKQLKLPESVVV--ARDIADAGNTSAASIPLAMHRLLEENPELSGGLALQIGFGAGLVYGAQVV 347 (350)
T ss_dssp EEEEECCSCHHHHHHHHHHTTCCTTSEE--CCTHHHHCBCGGGHHHHHHHHHHHHCGGGTTSEEEEEEEETTTEEEEEEE
T ss_pred ceEEecCCCHHHHHHHHHHcCcChHhEE--ecccccccchHHHHHHHHHHHHHHhCCCCCcCEEEEEEEchhhEeEEEEE
Confidence 9999999999999999999999999974 36899999999999999999999999999999999999999999999999
Q ss_pred Ee
Q 011007 466 KC 467 (496)
Q Consensus 466 r~ 467 (496)
||
T Consensus 348 r~ 349 (350)
T 4ewp_A 348 RL 349 (350)
T ss_dssp EC
T ss_pred Ee
Confidence 97
No 2
>3e1h_A PKSIIINC, putative uncharacterized protein; resorcinolic lipid synthase, type III PKS, acyltransferase, transferase; 2.58A {Neurospora crassa}
Probab=100.00 E-value=8.6e-53 Score=447.30 Aligned_cols=369 Identities=18% Similarity=0.243 Sum_probs=266.8
Q ss_pred CCCceEEEEeeeecCCCCcccChHHHHHHHhhhhcCCc-chHHHHHHHHHHcCCCceeecCCCCc---CCCCCC----ch
Q 011007 84 KPRHVYLVDYACYKPPVTCRVPFATFMEHSRLILKNNP-KSVEFQMRILERSGLGEETCLPPAIH---YIPPTP----TM 155 (496)
Q Consensus 84 ~~~~v~Iv~~~~y~P~~~~~v~~~~~~e~~~~~~~~~~-~~~~f~~~i~~~sGi~~r~~~~~~~~---~~~~~~----~~ 155 (496)
+..+++|.++|+|+|+ ++++|+++.+.++.. +++ .+.+.+++|++++||++|+++.+.+. .....+ .+
T Consensus 28 ~~~~v~I~gigt~lP~--~~v~n~el~~~~~~~--~~~~~~~~~~~~i~~~tGI~~R~~~~~~~~p~~~~~~~ps~~~r~ 103 (465)
T 3e1h_A 28 GELGLSITGLGVQYPP--YSLGPDAIDILSKRY--HPESPAMKKVLAINRYTGIDQRSSIGNPDHPLVNKPNPPTVKELH 103 (465)
T ss_dssp CCCCEEEEEEEEECCS--SCCBCTHHHHHTCSS--SCCCHHHHHHHHHTTTSCCCCBCCSSCTTCGGGSSSSCCCHHHHH
T ss_pred CCCCEEEEEEEEECCC--cEEcHHHHHHHHHHh--cccchhHHHHHHHHHhcCCceEEEeecccCcccccccCCCHHHHH
Confidence 4567999999999999 899999998876532 222 23444557999999999999855321 001122 34
Q ss_pred HHHHHhHHHHHHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCCceeeEecCCCcchHHHHHHHHH
Q 011007 156 EAARGEAELVIFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLAR 235 (496)
Q Consensus 156 ~~~~~ea~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~ 235 (496)
..+.+++.+|+.+|+++||+++|++|+|||+||++|++++..|+.+++|+++||+++.+.+||+.++||+||+.||.+|.
T Consensus 104 ~~~~~~a~~La~~Aa~~AL~~agi~~~dId~li~~t~t~~~~P~~a~~v~~~LGl~~~~~~~dv~~~~Csgg~~AL~~A~ 183 (465)
T 3e1h_A 104 EVFMSDGVPLAVEASRKAMAEARLVPAQITHMVSTTCTDSANPGYDHYVAKELGLSDRLEKVLLHGIGCSGGLAALRTAA 183 (465)
T ss_dssp HHHHHHTHHHHHHHHHHHHHHHTCCGGGCCEEEEECSSCCCSSCHHHHHHHHHTCCTTCEEEEECSCGGGHHHHHHHHHH
T ss_pred HHHHhhHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeeCCCCCCcHHHHHHHHhCCCCCeeEEEecCCcchHHHHHHHHHH
Confidence 45667789999999999999999999999999999877889999999999999999666699995489999999999999
Q ss_pred HHHhc----CCCCEEEEEEECCCCCCCccCC------CccccccccccccccEEEEEeccCCcc--cccceeEeeEEEEE
Q 011007 236 DLLQV----HPNSNAVVVSTEIITPNYYQGN------ERAMLLPNCLFRMGGAAILLSNRRRNR--SRAKYRLVHVVRTH 303 (496)
Q Consensus 236 ~lL~~----~~~~~aLVVs~E~~s~~~~~~~------dr~~l~~~~lfgDGAaA~lLs~~~~~~--~~~~~~L~~~~~t~ 303 (496)
+++++ +..++||||++|.+|.. +++. .+....++++|||||+|+||++++... ..+.|++.+.....
T Consensus 184 ~~i~a~~~~G~~~~vLVvg~E~~S~~-~~~~~~~~~~~~~d~~t~~LFGDGAaAvVl~~~~~~~~~~~~~~~l~~~~~~~ 262 (465)
T 3e1h_A 184 NLCLGHTARGKPARILVLALEVSTTM-VRSELESIDALQETRIGIALFSDCASAVILSNGIGEAPGKPAIYDLLGWENRV 262 (465)
T ss_dssp HHHHHHHHTTCCCEEEEEEEECCGGG-HHHHHHHHHHHTCCCCHHHHBCCEEEEEEEECCTTCCTTCCCSEEEEEEEEEE
T ss_pred HHHhcccccCCCCEEEEEEEeecchh-cCcccccccccccccccccccccceeEEEEEccCCCccccccceeeccceEEE
Confidence 99997 77899999999999873 3220 012233789999999999999875421 22456665543322
Q ss_pred ecCCcccccceeecccCCCceeeeechhHHHHHHHHhhhhhhhcCCCccchhHHHHHHHHHHHHhhhcc---ccCCcccc
Q 011007 304 KGADDKAYRCVFEEEDKEGKVGISLSKDLMAIAGEALKSNITTIGPLVLPASEQLLFLMTLIGRKIFNP---KWKPYIPD 380 (496)
Q Consensus 304 ~~~d~~~~~~~~~~~d~~G~~g~~ls~d~~~v~g~~l~~~i~~~gp~vlp~~e~~~~~~~~~~~~v~~~---~~~~~~p~ 380 (496)
.. ++.. .+....+++| ..+.+++++++.+.+.+...++ ++++. .++. ...
T Consensus 263 ~p-~~~~--~~~~~~~~~g-~~~~~g~~V~~~a~~~v~~~i~----------------------~~L~~~g~~L~~-agl 315 (465)
T 3e1h_A 263 IP-DSEH--DLGFDVDPMG-WKVVLSPRVPVLAKASLQPTYA----------------------DLLSSLQDQLPS-SYQ 315 (465)
T ss_dssp CT-TCTT--TEEEEEETTE-EEEEECTTHHHHHHHHHHHHHH----------------------HHHHHHGGGSCT-TSC
T ss_pred ec-CCcc--ccCccccCCC-ceEecChHHHHHHHHHHHHHHH----------------------HHHHhccccccc-cCC
Confidence 22 2111 1111112222 3455678888776544433322 22211 0111 011
Q ss_pred hhccccEEEeccCCHHHHHHHHHHcCCChhhHhhhhhhhcccCCccCCchHHHHHHHHHh--CCCCCC----CEEEEEee
Q 011007 381 FKQAFEHFCIHAGGRAVIDELQKNLQLSAEHVEASRMTLHRFGNTSSSSLWYEMSYIEEK--GRMKKG----DRVWQIAF 454 (496)
Q Consensus 381 ~~~did~f~~H~~~~~v~~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~--g~i~~G----d~Vll~~f 454 (496)
..+||||| +||+|+++++.++++||++++|+..++.++++||||||||+|+.|+++.++ |++++| |+|+++||
T Consensus 316 ~~~DId~~-~Hqan~rIl~~v~~~Lgl~~ek~~~s~~~l~~yGNtsSASip~aL~~~~~~~~g~l~~Gg~~~d~vll~gf 394 (465)
T 3e1h_A 316 KPADFDWA-MHPGGATILSGAESAMGLTPEHMRASYDRYINHGNSSSATIFSVLNRLREKDMDALAPGGKVKEYVVGCAF 394 (465)
T ss_dssp SGGGSEEE-ECCSSHHHHHHHHHHHTCCGGGGHHHHHHHHHHCBCGGGHHHHHHHHHTSTTTTSCSSSSCCCSEEEEEEE
T ss_pred CHHHceEE-ecCCChHHHHHHHHHhCcCHHHhHHHHHHHhcceechHhHHHHHHHHHHHhcccccCCCCCCCCEEEEEEE
Confidence 24899976 999999999999999999999999889999999999999999999999988 789988 99999999
Q ss_pred chhHhhhheeeEeeccCCCCCCCCCcccccCCCCCC
Q 011007 455 GSGFKCNSAVWKCNKTIKTTTDNPWSDCIDRYPVHI 490 (496)
Q Consensus 455 G~G~~~~sav~r~~~~~~~~~~~~w~~~~~~~p~~~ 490 (496)
|+|++|++++|||.+... ..++|.+| ||++.
T Consensus 395 G~Glt~~~~llr~~~~~~--~~~~~~~~---~~~~~ 425 (465)
T 3e1h_A 395 GPGINVEMCMLKRRMNAP--ARTTTGLD---TPPET 425 (465)
T ss_dssp ETTTEEEEEEEEECCC--------------------
T ss_pred hHHHhhhheeeEEecccc--CCCCCCCC---CCCCC
Confidence 999999999999988654 25799999 99875
No 3
>3il6_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; HET: B83; 2.50A {Enterococcus faecalis} PDB: 3il5_A* 3il4_A*
Probab=100.00 E-value=4.4e-52 Score=423.54 Aligned_cols=316 Identities=18% Similarity=0.262 Sum_probs=253.9
Q ss_pred CceEEEEeeeecCCCCcccChHHHHHHHhhhhcCCcchHHHHHHHHHHcCCCceeecCCCCcCCCCCCchHHHHHhHHHH
Q 011007 86 RHVYLVDYACYKPPVTCRVPFATFMEHSRLILKNNPKSVEFQMRILERSGLGEETCLPPAIHYIPPTPTMEAARGEAELV 165 (496)
Q Consensus 86 ~~v~Iv~~~~y~P~~~~~v~~~~~~e~~~~~~~~~~~~~~f~~~i~~~sGi~~r~~~~~~~~~~~~~~~~~~~~~ea~~l 165 (496)
++++|.++|+|+|+ ++++|+++.+.++. +++ ||.+++||++|+++++++ +.+|
T Consensus 3 ~~~~I~~~g~~lP~--~~v~n~~~~~~~~~----~~~------~i~~~~Gi~~R~~a~~~e---------------~~~L 55 (321)
T 3il6_A 3 NYARISCTSRYVPE--NCVTNHQLSEMMDT----SAA------WIHSRTGISERRIVTQEN---------------TSDL 55 (321)
T ss_dssp CEEEEEEEEEECCS--CEEEHHHHHHHTTS----CHH------HHHHHHSCSEEECCSSCC---------------HHHH
T ss_pred CcEEEEEEEEECCC--cEEcHHHHHHHhCC----Chh------hhhhhcCceEEEECCCCC---------------HHHH
Confidence 57999999999999 89999999988663 443 789999999999987653 6899
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEeecc-CCCCCCcHHHHHHHHcCCCCCceeeEecCCCcchHHHHHHHHHHHHhcCCCC
Q 011007 166 IFSAMDSLLQKTGLKPKDIDILIVNCS-LFSPTPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLLQVHPNS 244 (496)
Q Consensus 166 a~~Aa~~aL~~agi~p~dID~LI~~ss-~~~~~Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL~~~~~~ 244 (496)
+.+|++++|+++|++|+|||.||++|+ +++..|+.+.+|+++||++ ++.+|+++ ++|+|++.||.+|.+++++++.+
T Consensus 56 a~~Aa~~aL~~ag~~~~~Id~li~~t~~~~~~~p~~a~~v~~~lGl~-~~~~~~v~-~aC~s~~~al~~A~~~i~~g~~~ 133 (321)
T 3il6_A 56 CHQVAKQLLEKSGKQASEIDFILVATVTPDFNMPSVACQVQGAIGAT-EAFAFDIS-AACSGFVYALSMAEKLVLSGRYQ 133 (321)
T ss_dssp HHHHHHHHHHHHTCCGGGCCEEEEECSSCSCSSSCHHHHHHHHTTCT-TCEEEEEC-CGGGHHHHHHHHHHHHHHTSSCC
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEeCCCCcCCCcHHHHHHHHcCCC-CceEEEeC-cccHHHHHHHHHHHHHHHCCCCC
Confidence 999999999999999999999999975 5888999999999999998 59999999 79999999999999999999999
Q ss_pred EEEEEEECCCCCCCccCCCccccccccccccccEEEEEeccCCcccccceeEeeEEEEEecCCcccccceeecccCCCce
Q 011007 245 NAVVVSTEIITPNYYQGNERAMLLPNCLFRMGGAAILLSNRRRNRSRAKYRLVHVVRTHKGADDKAYRCVFEEEDKEGKV 324 (496)
Q Consensus 245 ~aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAaA~lLs~~~~~~~~~~~~L~~~~~t~~~~d~~~~~~~~~~~d~~G~~ 324 (496)
+||||++|.+|. +.+++||. +..+|||||+|+||++++.. ++..++..+|++.+++++.+.++..
T Consensus 134 ~vLvvg~e~~s~-~~~~~dr~---~~~lfGDGA~A~vl~~~~~~---------~i~~~~~~s~~~~~~~~~~~~~~~~-- 198 (321)
T 3il6_A 134 TGLVIGGETFSK-MLDWTDRS---TAVLFGDGAAGVLIEAAETP---------HFLNEKLQADGQRWTALTSGYTINE-- 198 (321)
T ss_dssp CEEEEEEECGGG-GSCTTCTT---TGGGBCCEEEEEEEEEESSC---------CEEEEEEEECGGGGGGEECCCCCCC--
T ss_pred EEEEEEEccccc-cCCccccc---cceeeccccEEEEEEEcCCC---------CEEEEEEEEcCCCCCeEEeCCCCCC--
Confidence 999999999997 55677876 57899999999999987642 1344567788888887776532110
Q ss_pred eeeechhHHHHHHHHhhhhhhhcCCCccchhHHHHHHHHHHHHhhhccccCCcccchhccccEEEeccCCHHHHHHHHHH
Q 011007 325 GISLSKDLMAIAGEALKSNITTIGPLVLPASEQLLFLMTLIGRKIFNPKWKPYIPDFKQAFEHFCIHAGGRAVIDELQKN 404 (496)
Q Consensus 325 g~~ls~d~~~v~g~~l~~~i~~~gp~vlp~~e~~~~~~~~~~~~v~~~~~~~~~p~~~~did~f~~H~~~~~v~~~i~~~ 404 (496)
.+...+.. . . ...+...|+ +-+++....+ .+++++.++ .+|||||++||+|+++++.+++.
T Consensus 199 -~~~~~~~~-~-~---~~~~~~~g~------~v~~~~~~~~-~~~i~~~l~------~~did~~v~Hq~~~~i~~~~~~~ 259 (321)
T 3il6_A 199 -SPFYQGHK-Q-A---SKTLQMEGR------SIFDFAIKDV-SQNILSLVT------DETVDYLLLHQANVRIIDKIARK 259 (321)
T ss_dssp -STTCCCCC-C-C---CCSCEECHH------HHHHHHHHHH-HHHHHTTCC------GGGCSEEEECCSCHHHHHHHHHH
T ss_pred -CCCCcccc-c-c---ccceeechH------HHHHHHHHHH-HHHHHHHcC------cccCCEEEEcCCCHHHHHHHHHH
Confidence 00000000 0 0 001111111 1111111111 223333333 48999999999999999999999
Q ss_pred cCCChhhHhhhhhhhcccCCccCCchHHHHHHHHHhCCCCCC--CEEEEEeechhHhhhheeeEe
Q 011007 405 LQLSAEHVEASRMTLHRFGNTSSSSLWYEMSYIEEKGRMKKG--DRVWQIAFGSGFKCNSAVWKC 467 (496)
Q Consensus 405 Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~i~~G--d~Vll~~fG~G~~~~sav~r~ 467 (496)
||+++||+ ..++++||||||+|+|+.|++++++|++++| |+|+++|||+|++|++++||.
T Consensus 260 lgl~~ek~---~~~l~~~GNt~sasi~~~L~~~~~~g~~~~G~~d~vll~~fG~G~t~~~~~l~v 321 (321)
T 3il6_A 260 TKISREKF---LTNMDKYGNTSAASIPILLDEAVENGTLILGSQQRVVLTGFGGGLTWGSLLLTL 321 (321)
T ss_dssp HTCCGGGB---CCCGGGTCBCGGGHHHHHHHHHHHTTSSCTTSCCEEEEEEEETTTEEEEEEEEC
T ss_pred cCcCHHHh---hhhHhhcccHHHHHHHHHHHHHHHhCCCCCCCCCEEEEEEEehhheeEEEEEEC
Confidence 99999999 5799999999999999999999999999999 999999999999999999984
No 4
>3euo_A Type III pentaketide synthase; alpha helix, acyltransferase, transferase; 1.75A {Neurospora crassa} PDB: 3eut_A* 3euq_A*
Probab=100.00 E-value=1.3e-51 Score=429.19 Aligned_cols=351 Identities=19% Similarity=0.263 Sum_probs=265.3
Q ss_pred ceEEEEeeeecCCCCcccChHHHHHHHhhhhcCCcchHHHHHHHHHHcCCCceeecCCCCc---CCCCCC----chHHHH
Q 011007 87 HVYLVDYACYKPPVTCRVPFATFMEHSRLILKNNPKSVEFQMRILERSGLGEETCLPPAIH---YIPPTP----TMEAAR 159 (496)
Q Consensus 87 ~v~Iv~~~~y~P~~~~~v~~~~~~e~~~~~~~~~~~~~~f~~~i~~~sGi~~r~~~~~~~~---~~~~~~----~~~~~~ 159 (496)
.++|.++|+|+|+ ++++|+++.+.++.... ..++.+..++|++++||++||++.+.+. .....+ .++.+.
T Consensus 2 ~v~I~~ig~~~P~--~~v~~~e~~~~~~~~~~-~~~~~~~~~~i~~~tGI~~R~~~~~~~~~~~~~~~~~s~~~r~~~~~ 78 (379)
T 3euo_A 2 GLSITGLGVQYPP--YSLGPDAIDILSKRYHP-ESPAMKKVLAINRYTGIDQRSSIGNPDHPLVNKPNPPTVKELHEVFM 78 (379)
T ss_dssp CCEEEEEEEECCS--EEECTHHHHHHHHHHCC-CCHHHHHHHHHTTSSCCCCEEESSCTTCGGGSSSSCCCHHHHHHHHH
T ss_pred ceEEEEEEeeCCC--ceeCHHHHHHHHHHhcc-cchhHHHHHHHHHhCCcceeeeeecCcCcccccccCCCHHHHHHHHH
Confidence 4899999999999 89999999887664211 2233444568999999999999832211 001122 344567
Q ss_pred HhHHHHHHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCCceeeEecCCCcchHHHHHHHHHHHHh
Q 011007 160 GEAELVIFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLLQ 239 (496)
Q Consensus 160 ~ea~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL~ 239 (496)
+++.+|+.+|+++||+++|++|+|||+||++|++++..|+.+++|+++||+++.+.+||+.++||+||+.||.+|.++++
T Consensus 79 ~~~~~La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~p~~a~~v~~~LGl~~~~~~~~v~~~~C~~~~~al~~A~~~i~ 158 (379)
T 3euo_A 79 SDGVPLAVEASRKAMAEARLVPAQITHMVSTTCTDSANPGYDHYVAKELGLSDRLEKVLLHGIGASGGLAALRTAANLCL 158 (379)
T ss_dssp HHTHHHHHHHHHHHHHHHTCCGGGCCEEEEECSSCCCSSCHHHHHHHHHTCCTTCEEEEECSCGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCCHHHHHHHHcCCCCCeeEEEeeCchhhHHHHHHHHHHHHHH
Confidence 78999999999999999999999999999998778899999999999999996666999954899999999999999999
Q ss_pred c----CCCCEEEEEEECCCCCCCccCC------CccccccccccccccEEEEEeccCCcc--cccceeEeeEEEEEecCC
Q 011007 240 V----HPNSNAVVVSTEIITPNYYQGN------ERAMLLPNCLFRMGGAAILLSNRRRNR--SRAKYRLVHVVRTHKGAD 307 (496)
Q Consensus 240 ~----~~~~~aLVVs~E~~s~~~~~~~------dr~~l~~~~lfgDGAaA~lLs~~~~~~--~~~~~~L~~~~~t~~~~d 307 (496)
+ |..++||||++|.+|..+ ++. .+....++++|||||+|+||++++... ..+.|++.+...+... +
T Consensus 159 a~~~~G~~~~vLvv~~E~~s~~~-~~~~~~~~~~~~d~~~~~LFGDGAaAvvl~~~~~~~~~~~~~~~~~~~~~~~~p-~ 236 (379)
T 3euo_A 159 GHTARGKPARILVLALEVSTTMV-RSELESIDALQETRIGIALFSDCASAVILSNGIGEAPGKPAIYDLLGWENRVIP-D 236 (379)
T ss_dssp HHHHTTCCCEEEEEEEECCGGGH-HHHHHHHHHHCCCCCHHHHBCCEEEEEEEECCTTCCTTCCCSEEEEEEEEEECT-T
T ss_pred hccccCCCCEEEEEEEEeehhhh-cCccccccccHHHhhcceeecCccEEEEEecCCCCccccccceeeeceeEEEec-C
Confidence 8 778999999999998733 321 012234789999999999999876421 2346777654433322 2
Q ss_pred cccccceeecccCCCceeeeechhHHHHHHHHhhhhhhhcCCCccchhHHHHHHHHHHHHhhhc-cccCCcccchhcccc
Q 011007 308 DKAYRCVFEEEDKEGKVGISLSKDLMAIAGEALKSNITTIGPLVLPASEQLLFLMTLIGRKIFN-PKWKPYIPDFKQAFE 386 (496)
Q Consensus 308 ~~~~~~~~~~~d~~G~~g~~ls~d~~~v~g~~l~~~i~~~gp~vlp~~e~~~~~~~~~~~~v~~-~~~~~~~p~~~~did 386 (496)
.. +.+....+++| ..+.+++++++.+.+.+...++. .+...+ +.+. ..+. .+|||
T Consensus 237 ~~--~~~~~~~~~~g-~~~~~~~~v~~~~~~~~~~~i~~--------------~L~~~~-~~l~~~gl~------~~did 292 (379)
T 3euo_A 237 SE--HDLGFDVDPMG-WKVVLSPRVPVLAKASLQPTYAD--------------LLSSLQ-DQLPSSYQK------PADFD 292 (379)
T ss_dssp CG--GGEEEEEETTE-EEEEECTTHHHHHHHHHHHHHHH--------------HHHHHG-GGSCTTSCS------GGGSE
T ss_pred ch--hhcCceecCCC-cEEEeChHHHHHHHHHHHHHHHH--------------HHHhcC-cccccccCC------hhHee
Confidence 21 11211222222 34567888887765544433321 000000 0111 1122 48999
Q ss_pred EEEeccCCHHHHHHHHHHcCCChhhHhhhhhhhcccCCccCCchHHHHHHHHHhC--CCCCC----CEEEEEeechhHhh
Q 011007 387 HFCIHAGGRAVIDELQKNLQLSAEHVEASRMTLHRFGNTSSSSLWYEMSYIEEKG--RMKKG----DRVWQIAFGSGFKC 460 (496)
Q Consensus 387 ~f~~H~~~~~v~~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g--~i~~G----d~Vll~~fG~G~~~ 460 (496)
|+ +||+|+++++.++++||++++|+..|+.++++||||||||+|+.|+++.++| ++++| |+|+++|||+|++|
T Consensus 293 ~~-~Hq~n~~il~~v~~~Lgl~~ek~~~s~~~l~~~GNtssAsi~~~L~~~~~~g~~~l~~Gg~~~d~vll~~fG~G~t~ 371 (379)
T 3euo_A 293 WA-MHPGGATILSGAESAMGLTPEHMRASYDRYINHGNSSSATIFSVLNRLREKDMDALAPGGKVKEYVVGCAFGPGINV 371 (379)
T ss_dssp EE-ECCSSHHHHHHHHHHHTCCGGGGHHHHHHHHHHCBCGGGHHHHHHHHHTSHHHHTTCGGGCCCSEEEEEEEETTTEE
T ss_pred EE-eCCCChHHHHHHHHHhCCCHHHHHHHHHHHHhcCccHHHHHHHHHHHHHhhcccccCCCCCCCCeEEEEEECcccEe
Confidence 65 9999999999999999999999999999999999999999999999999887 88888 99999999999999
Q ss_pred hheeeEe
Q 011007 461 NSAVWKC 467 (496)
Q Consensus 461 ~sav~r~ 467 (496)
+++||||
T Consensus 372 ~~~ll~~ 378 (379)
T 3euo_A 372 EMCMLKR 378 (379)
T ss_dssp EEEEEEE
T ss_pred EEEEEEe
Confidence 9999997
No 5
>3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A
Probab=100.00 E-value=1.5e-51 Score=426.77 Aligned_cols=328 Identities=16% Similarity=0.282 Sum_probs=256.3
Q ss_pred CCceEEEEeeeecCCCCcccChHHHHHHHhhhhcCCcchHHHHHHHHHHcCCCceeecCCCCcCCCCCCchHHHHHhHHH
Q 011007 85 PRHVYLVDYACYKPPVTCRVPFATFMEHSRLILKNNPKSVEFQMRILERSGLGEETCLPPAIHYIPPTPTMEAARGEAEL 164 (496)
Q Consensus 85 ~~~v~Iv~~~~y~P~~~~~v~~~~~~e~~~~~~~~~~~~~~f~~~i~~~sGi~~r~~~~~~~~~~~~~~~~~~~~~ea~~ 164 (496)
-++++|.++|+|+|+ ++++|+++.+.++. .++ +||.+++||++|+++.+++. +.+
T Consensus 28 ~~~v~I~gig~~lP~--~~v~n~~l~~~~~~---~~~------~~i~~~tGI~~R~~a~~~~~--------------~~~ 82 (365)
T 3gwa_A 28 PPRAAIADIAGHLPE--QVLTNDVLAQLYPD---WPA------EKILAKTGIRERRIAAPRET--------------AAD 82 (365)
T ss_dssp -CEEEEEEEEEECCS--EEEEHHHHHHHCTT---CCH------HHHHHHHCCCEEEECCTTCC--------------HHH
T ss_pred eccEEEEEEEEeCCC--cEEcHHHHHHHccC---CCH------HHHHHhcCccEEEECCCCCC--------------HHH
Confidence 367999999999999 89999999987631 133 37999999999999987764 789
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEeecc-CCCCCCcHHHHHHHHcCCCCCceeeEecCCCcchHHHHHHHHHHHHhcCCC
Q 011007 165 VIFSAMDSLLQKTGLKPKDIDILIVNCS-LFSPTPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLLQVHPN 243 (496)
Q Consensus 165 la~~Aa~~aL~~agi~p~dID~LI~~ss-~~~~~Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL~~~~~ 243 (496)
|+.+|++++|+++|++|+|||.||++|+ +++..|+.+.+|+++||+++++.+++++ ++|+|++.||.+|.+++++++.
T Consensus 83 La~~Aa~~aL~~ag~~~~~Id~vi~~t~~~~~~~p~~a~~v~~~lGl~~~~~~~~v~-~~C~s~~~Al~~A~~~i~~g~~ 161 (365)
T 3gwa_A 83 LAYEAARKLFAQGAVGADQVDFVILCTQAPDYVLPTSACMLQHRLGIPTHAGALDVN-LGCSGYVYGLSLAKGLVETGAA 161 (365)
T ss_dssp HHHHHHHHHHHTTSCCGGGCCEEEEEESSCSCSBSCHHHHHHHHTTCCTTSEEEEEE-CSTTHHHHHHHHHHHHHHTTSC
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCCcHHHHHHHHcCCCCCceEEEec-ccChHHHHHHHHHHHHHHcCCC
Confidence 9999999999999999999999999864 6788999999999999998789999999 7999999999999999999999
Q ss_pred CEEEEEEECCCCCCCccCCCccccccccccccccEEEEEeccCCcccccceeEeeEEEEEecCCcccccceeecccCCCc
Q 011007 244 SNAVVVSTEIITPNYYQGNERAMLLPNCLFRMGGAAILLSNRRRNRSRAKYRLVHVVRTHKGADDKAYRCVFEEEDKEGK 323 (496)
Q Consensus 244 ~~aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAaA~lLs~~~~~~~~~~~~L~~~~~t~~~~d~~~~~~~~~~~d~~G~ 323 (496)
++||||++|.+|. ..+++||. +..+|||||+|+||++++... . ++..+...+|++.++.+..+.++.
T Consensus 162 ~~vLvvg~e~~s~-~~~~~dr~---~~~lfGDGAaA~vl~~~~~~~----~---~i~~~~~~s~g~~~~~~~~~~gg~-- 228 (365)
T 3gwa_A 162 RCVLLLTADTYSK-YLHPLDKS---VRTLFGDGASATAVIAEHGEL----E---RIGPFVFGTDGRGAPNLIVKAGLF-- 228 (365)
T ss_dssp SEEEEEEEECGGG-GSCTTCHH---HHTTBCCEEEEEEEEEECSSS----C---SEEEEEEEECGGGGGGEEECSSSS--
T ss_pred CEEEEEEEchhhc-cCCccccc---ccccccceeEEEEEEecCCCC----C---ceEEEEEEEcCCCCCeEEecCCCc--
Confidence 9999999999997 34556776 467999999999999876531 1 133456678888777766553221
Q ss_pred eeeeechhHHH----HHHHH-hhhhhhhcCCCccchhHHHHHHHHH---HHHhhhcc-ccCCcccchhccccEEEeccCC
Q 011007 324 VGISLSKDLMA----IAGEA-LKSNITTIGPLVLPASEQLLFLMTL---IGRKIFNP-KWKPYIPDFKQAFEHFCIHAGG 394 (496)
Q Consensus 324 ~g~~ls~d~~~----v~g~~-l~~~i~~~gp~vlp~~e~~~~~~~~---~~~~v~~~-~~~~~~p~~~~did~f~~H~~~ 394 (496)
..+.+.+.+. ..+.. -...+...|+.+ +++.... ..++++++ .++ .+|||+|++||+|
T Consensus 229 -~~p~~~~~~~~~~~~~~~~~~~~~~~m~g~~v------~~~~~~~~~~~i~~~L~~~gl~------~~did~~v~Hq~n 295 (365)
T 3gwa_A 229 -REPKSADSAREHEDASGNVRTDEHLYMNGAEV------MAFSLAEVPRAADRLLALAGEP------RENIDCFVLHQAN 295 (365)
T ss_dssp -SSCCCTGGGCCEECTTSCEECTTSEEECHHHH------HHHHHHHHHHHHHHHHHHHTCC------GGGCSEEEECCCC
T ss_pred -CCCCcccccccccccccccccccceEeccHHH------HHHHHHHHHHHHHHHHHHcCCC------HHHCCEEEEcCCC
Confidence 1111111000 00000 000111122111 1111111 11333332 222 4899999999999
Q ss_pred HHHHHHHHHHcCCChhhHhhhhhhhcccCCccCCchHHHHHHHHHhCCCCCCCEEEEEeechhHhhhheeeEe
Q 011007 395 RAVIDELQKNLQLSAEHVEASRMTLHRFGNTSSSSLWYEMSYIEEKGRMKKGDRVWQIAFGSGFKCNSAVWKC 467 (496)
Q Consensus 395 ~~v~~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~i~~Gd~Vll~~fG~G~~~~sav~r~ 467 (496)
+++++.+++.||+++||+ ..++++||||||||+|+.|++++++|++++||+|+++|||+|++|+++||||
T Consensus 296 ~~i~~~~~~~Lgl~~ek~---~~~l~~~GNtssAsipl~L~~~~~~g~~~~Gd~vll~~fG~G~t~~~~ll~~ 365 (365)
T 3gwa_A 296 RFMLDALRKKMKIPEHKF---PVLMEHCGNTVSSTLPLALETMRANGTLARGMRLMLLGFGVGYSWAGCLVNF 365 (365)
T ss_dssp HHHHHHHHHHHTCCGGGS---CCCCTTTCBCGGGHHHHHHHHHHHTTCCCTTCEEEEEEEETTTEEEEEEEEC
T ss_pred HHHHHHHHHHhCCCHHHH---HHHHhcccchHHHHHHHHHHHHHHcCCCCCCCEEEEEEEehhheeEEEEEEC
Confidence 999999999999999999 5799999999999999999999999999999999999999999999999997
No 6
>3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae}
Probab=100.00 E-value=1.4e-51 Score=420.30 Aligned_cols=310 Identities=18% Similarity=0.322 Sum_probs=250.8
Q ss_pred CceEEEEeeeecCCCCcccChHHHHHHHhhhhcCCcchHHHHHHHHHHcCCCceeecCCCCcCCCCCCchHHHHHhHHHH
Q 011007 86 RHVYLVDYACYKPPVTCRVPFATFMEHSRLILKNNPKSVEFQMRILERSGLGEETCLPPAIHYIPPTPTMEAARGEAELV 165 (496)
Q Consensus 86 ~~v~Iv~~~~y~P~~~~~v~~~~~~e~~~~~~~~~~~~~~f~~~i~~~sGi~~r~~~~~~~~~~~~~~~~~~~~~ea~~l 165 (496)
.+-+|+++|+|+|+ ++++|+++.+.++. +++ ||.+++||++|+++++++. +.+|
T Consensus 8 ~~~~~~~~g~ylP~--~~v~n~~l~~~~~~----~~~------~i~~~tGi~~R~~a~~~~~--------------~~~L 61 (323)
T 3il3_A 8 MNSRILSTGSYLPS--HIRTNADLEKMVDT----SDE------WIVTRSGIRERRIAAEDET--------------VATM 61 (323)
T ss_dssp CEECCCEEEEECCS--CEEEHHHHHTTSSC----CHH------HHHHHTCCCEEECCCTTCC--------------HHHH
T ss_pred ccCceeEEEEECCC--ceEcHHHHHHHhCC----CHH------HHHHhcCCcEEEECCCCCC--------------HHHH
Confidence 45679999999999 89999999887653 333 7899999999999987764 7899
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEeecc-CCCCCCcHHHHHHHHcCCCCCceeeEecCCCcchHHHHHHHHHHHHhcCCCC
Q 011007 166 IFSAMDSLLQKTGLKPKDIDILIVNCS-LFSPTPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLLQVHPNS 244 (496)
Q Consensus 166 a~~Aa~~aL~~agi~p~dID~LI~~ss-~~~~~Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL~~~~~~ 244 (496)
+.+|++++|+++|++|+|||.||++|+ +++..|+.+.+|+++||++ ++.+++++ ++|+|++.||.+|.+++++++.+
T Consensus 62 a~~Aa~~aL~~ag~~~~~Id~vi~~t~~~~~~~p~~a~~v~~~lGl~-~~~~~~v~-~~C~s~~~al~~A~~~i~~g~~~ 139 (323)
T 3il3_A 62 GFEAAKNAIEAAQINPQDIELIIVATTSHSHAYPSAACQVQGLLNID-DAISFDLA-AACTGFVYALSVADQFIRAGKVK 139 (323)
T ss_dssp HHHHHHHHHHHHCCCGGGCCEEEEECSCCSCSSSCHHHHHHHHTTCS-SCEEEEEC-CGGGHHHHHHHHHHHHHHTTSCS
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCccHHHHHHHHhCCC-CccEEEEC-CccHHHHHHHHHHHHHHHCCCCC
Confidence 999999999999999999999999875 6688999999999999997 79999999 79999999999999999999999
Q ss_pred EEEEEEECCCCCCCccCCCccccccccccccccEEEEEeccCCcccccceeEeeEEEEEecCCcccccceeecccCC--C
Q 011007 245 NAVVVSTEIITPNYYQGNERAMLLPNCLFRMGGAAILLSNRRRNRSRAKYRLVHVVRTHKGADDKAYRCVFEEEDKE--G 322 (496)
Q Consensus 245 ~aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAaA~lLs~~~~~~~~~~~~L~~~~~t~~~~d~~~~~~~~~~~d~~--G 322 (496)
+||||++|.+|. ..+++||. +..+|||||+|+||++++.. +++.++..++++.++.+..+.... +
T Consensus 140 ~vLvvg~e~~s~-~~~~~d~~---~~~lfGDGA~A~vl~~~~~~---------~i~~~~~~s~g~~~~~~~~~g~~~~~~ 206 (323)
T 3il3_A 140 KALVIGSDLNSR-KLDETDRS---TVVLFGDGAGAVILEASEQE---------GIISTHLHASADKNNALVLAQPERGIE 206 (323)
T ss_dssp EEEEEEEEEGGG-SCCTTCTT---TTTTBCEEEEEEEEEEESSC---------CEEEEEEEECCCCSCSEECCCCCTTCS
T ss_pred EEEEEEeecccc-ccCccccc---cccccccceEEEEEEEcCCC---------CeEEEEEEEcCCCcceEEECCCCCCCC
Confidence 999999999997 34566776 57899999999999987521 234456677887777766542110 0
Q ss_pred cee-ee-echhHHHHHHHHhhhhhhhcCCCccchhHHHHHHHHHHHHhhhcc-ccCCcccchhccccEEEeccCCHHHHH
Q 011007 323 KVG-IS-LSKDLMAIAGEALKSNITTIGPLVLPASEQLLFLMTLIGRKIFNP-KWKPYIPDFKQAFEHFCIHAGGRAVID 399 (496)
Q Consensus 323 ~~g-~~-ls~d~~~v~g~~l~~~i~~~gp~vlp~~e~~~~~~~~~~~~v~~~-~~~~~~p~~~~did~f~~H~~~~~v~~ 399 (496)
..+ +. .++++++.+.+ .+....++++++ .++ .+|||+|++||+|+++++
T Consensus 207 ~~~~~~~~g~~v~~~~~~----------------------~~~~~i~~~l~~~gl~------~~did~~v~Hq~~~~i~~ 258 (323)
T 3il3_A 207 KSGYIEMQGNETFKLAVR----------------------ELSNVVEETLLANNLD------KKDLDWLVPHQANLRIIT 258 (323)
T ss_dssp SCSCCEECHHHHHHHHHH----------------------HHHHHHHHHHHTTTCC------TTTCCEEEECCSCHHHHH
T ss_pred CCCcEEEcCHHHHHHHHH----------------------HHHHHHHHHHHHcCCC------HHHCCEEEEcCCCHHHHH
Confidence 000 00 01111111100 001112334432 222 489999999999999999
Q ss_pred HHHHHcCCChhhHhhhhhhhcccCCccCCchHHHHHHHHHhCCCCCCCEEEEEeechhHhhhheeeEe
Q 011007 400 ELQKNLQLSAEHVEASRMTLHRFGNTSSSSLWYEMSYIEEKGRMKKGDRVWQIAFGSGFKCNSAVWKC 467 (496)
Q Consensus 400 ~i~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~i~~Gd~Vll~~fG~G~~~~sav~r~ 467 (496)
.+++.||+++||+ ..++++||||||+|+|+.|++++++|++++||+|++++||+|++|+++||||
T Consensus 259 ~~~~~lgl~~ek~---~~~l~~~GNt~sasi~~~L~~~~~~g~~~~Gd~vll~~~G~G~t~~~~~l~~ 323 (323)
T 3il3_A 259 ATAKKLEMDMSQV---VVTLDKYANNSAATVPVALDEAIRDGRIQRGQLLLLEAFGGGWTWGSALVRF 323 (323)
T ss_dssp HHHHHTTCCGGGB---CCCHHHHCBCGGGHHHHHHHHHHHTTSSCTTCEEEEEEEETTTEEEEEEEEC
T ss_pred HHHHHcCcCHHHh---hccHhhcCchHHHHHHHHHHHHHHcCCCCCCCEEEEEEEehhheeEEEEEEC
Confidence 9999999999999 5789999999999999999999999999999999999999999999999997
No 7
>3oit_A OS07G0271500 protein; type III polyketide synthases, transferase; 2.00A {Oryza sativa} PDB: 3ale_A
Probab=100.00 E-value=3.4e-51 Score=427.07 Aligned_cols=349 Identities=18% Similarity=0.275 Sum_probs=260.4
Q ss_pred CCceEEEEeeeecCCCCcccChHHHHHHHhhhhcCCc---chHHHHHHHHHHcCCCceeecCCCCc---------CCCC-
Q 011007 85 PRHVYLVDYACYKPPVTCRVPFATFMEHSRLILKNNP---KSVEFQMRILERSGLGEETCLPPAIH---------YIPP- 151 (496)
Q Consensus 85 ~~~v~Iv~~~~y~P~~~~~v~~~~~~e~~~~~~~~~~---~~~~f~~~i~~~sGi~~r~~~~~~~~---------~~~~- 151 (496)
+.+++|.++|+|+|+ ++++|+++.+.+..... ++ +..+..+||++++||++|+++.+++. ...|
T Consensus 8 ~~~~~I~~ig~~~P~--~~v~n~e~~~~~~~~~~-~~~~~~~~~~~~~i~~~tGI~~R~~~~~~e~~~~~~~~~~~~~p~ 84 (387)
T 3oit_A 8 DGLAAVLAIGTANPP--NCVTQEEIPDFYFRVTN-SDHLTALKDKFKRICQEMGVQRRYLHHTEEMLSAHPEFVDRDAPS 84 (387)
T ss_dssp SSCCEEEEEEEECCS--EEEETTTHHHHHHHHTT-CTTCHHHHHHHHHHHHTSSCCEEEESCCHHHHHHCGGGTCTTSCC
T ss_pred CCCeEEEEEEeeCCC--ceecHHHHHHHHHHHhC-ccchHHHHHHHHHHHHhcCcceeeeecCHHHhccCccccccCCCC
Confidence 456999999999999 89999999998743211 12 12344568999999999999877541 1111
Q ss_pred -CCchHHHHHhHHHHHHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCCce-eeEecCCCcchHHH
Q 011007 152 -TPTMEAARGEAELVIFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSNIK-SFNLSGMGCSAGLI 229 (496)
Q Consensus 152 -~~~~~~~~~ea~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~~~-~~dl~g~gCsg~l~ 229 (496)
...++.+.+++.+|+.+|+++||+++|++|+|||.||++|++++..|+.+++|+++||+++.+. +++++ +||+|++.
T Consensus 85 ~~~r~~~~~~~~~~La~~Aa~~AL~~ag~~~~dId~li~~t~t~~~~p~~a~~v~~~LGl~~~~~~~~~~~-~~C~~~~~ 163 (387)
T 3oit_A 85 LDARLDIAADAVPELAAEAAKKAIAEWGRPAADITHLVVTTNSGAHVPGVDFRLVPLLGLRPSVRRTMLHL-NGCFAGCA 163 (387)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTSCGGGCCEEEEEESSCCEESCHHHHHHHHHTCCTTCEEEEEEC-CGGGHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeeCCCCcccHHHHHHHHhCCCCCcceeeEEC-chhHHHHH
Confidence 1234456678999999999999999999999999999998766889999999999999996664 89999 79999999
Q ss_pred HHHHHHHHHhcCCCCEEEEEEECCCCCCCccCCCcc--ccccccccccccEEEEEeccCCcccccceeEeeEEEEEecCC
Q 011007 230 SIDLARDLLQVHPNSNAVVVSTEIITPNYYQGNERA--MLLPNCLFRMGGAAILLSNRRRNRSRAKYRLVHVVRTHKGAD 307 (496)
Q Consensus 230 al~lA~~lL~~~~~~~aLVVs~E~~s~~~~~~~dr~--~l~~~~lfgDGAaA~lLs~~~~~~~~~~~~L~~~~~t~~~~d 307 (496)
||.+|.+++++++.++||||++|.+|..+.+++|+. .+.++++|||||+|+||++++.+...+.|++.....+.....
T Consensus 164 al~~A~~~i~sg~~~~vLvvg~E~~s~~~~~~~d~~~~~~~~~~lFGDGAaA~vl~~~~~~~~~~~~~~~~~~~~~~p~~ 243 (387)
T 3oit_A 164 ALRLAKDLAENSRGARVLVVAAELTLMYFTGPDEGCFRTLLVQGLFGDGAAAVIVGADADDVERPLFEIVSAAQTIIPES 243 (387)
T ss_dssp HHHHHHHHHHSSTTCEEEEEEEECGGGTCCCCCSSSCHHHHHHHHBCCEEEEEEEESSCCSSCCCCEEEEEEEEEECTTC
T ss_pred HHHHHHHHHhcCCCCEEEEEEEeccchhccCccccchHhhhcccccccceEEEEEecCCCcccCCceEEEecccEEeCCC
Confidence 999999999999999999999999986566666653 344688999999999999876322223466554333322211
Q ss_pred cccccceeecccCCCceeeeechhHHHHHHHHhhhhhhhcCCCccchhHHHHHHHHHHHHhhhcccc-CCcccchhcccc
Q 011007 308 DKAYRCVFEEEDKEGKVGISLSKDLMAIAGEALKSNITTIGPLVLPASEQLLFLMTLIGRKIFNPKW-KPYIPDFKQAFE 386 (496)
Q Consensus 308 ~~~~~~~~~~~d~~G~~g~~ls~d~~~v~g~~l~~~i~~~gp~vlp~~e~~~~~~~~~~~~v~~~~~-~~~~p~~~~did 386 (496)
...+. ..-..+| ..+.+++++|+.+.+.+...+ +++++... +.-+ .|+|
T Consensus 244 ~~~~~---~~~~~~g-~~~~~~~~v~~~~~~~~~~~~----------------------~~~L~~~~~~~gl----~d~d 293 (387)
T 3oit_A 244 DHALN---MRFTERR-LDGVLGRQVPGLIGDNVERCL----------------------LDMFGPLLGGDGG----GGWN 293 (387)
T ss_dssp TTSEE---EEECSSS-EEEEECTTHHHHHHHHHHHHH----------------------HHHTGGGCC----------GG
T ss_pred hhhcc---ceeecCC-eEEEECcHHHHHHHHHHHHHH----------------------HHHHHhhcccCCC----Cccc
Confidence 11111 1111122 456777888876654332211 23333210 0001 1455
Q ss_pred --EEEeccCCHHHHHHHHHHcCCChhhHhhhhhhhcccCCccCCchHHHHHHHHHhCCCCCC------CEEEEEeechhH
Q 011007 387 --HFCIHAGGRAVIDELQKNLQLSAEHVEASRMTLHRFGNTSSSSLWYEMSYIEEKGRMKKG------DRVWQIAFGSGF 458 (496)
Q Consensus 387 --~f~~H~~~~~v~~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~i~~G------d~Vll~~fG~G~ 458 (496)
+|++||+|+++++.++++||++++++..+++++++||||||||+|+.|+++.++ ++++| |+++++|||+|+
T Consensus 294 ~~~~v~Hq~n~~il~~v~~~Lgl~~ek~~~s~~~l~~~GNtssAsip~~L~~~~~~-~~~~G~~g~~~d~vll~~fG~G~ 372 (387)
T 3oit_A 294 DLFWAVHPGSSTIMDQVDAALGLEPGKLAASRRVLSDYGNMSGATVIFALDELRRQ-RKEAAAAGEWPELGVMMAFGPGM 372 (387)
T ss_dssp GSEEEECCCCHHHHHHHHHHHTCCTTTTHHHHHHHHHHCBCGGGHHHHHHHHHHHC-----------CCEEEEEEEETTT
T ss_pred ccEEEECCCCHHHHHHHHHHcCCCHHHHHHHHHHHHHhCchHHhHHHHHHHHHHHh-hhccCCCCCCCCEEEEEEecccc
Confidence 999999999999999999999999998888899999999999999999998776 78888 899999999999
Q ss_pred hhhheeeEee
Q 011007 459 KCNSAVWKCN 468 (496)
Q Consensus 459 ~~~sav~r~~ 468 (496)
+|+++|||+.
T Consensus 373 t~~~~ll~~~ 382 (387)
T 3oit_A 373 TVDAMLLHAT 382 (387)
T ss_dssp EEEEEEEEEC
T ss_pred eeeeeeeEec
Confidence 9999999985
No 8
>3ov2_A Curcumin synthase; type III polyketide synthase, transferase; 2.32A {Curcuma longa} PDB: 3ov3_A
Probab=100.00 E-value=6.7e-51 Score=425.69 Aligned_cols=350 Identities=17% Similarity=0.219 Sum_probs=266.4
Q ss_pred CCCceEEEEeeeecCCCCcccChHHHHHHHhhhhcCCcc---hHHHHHHHHHHcCCCceeecCCCCc---------CCCC
Q 011007 84 KPRHVYLVDYACYKPPVTCRVPFATFMEHSRLILKNNPK---SVEFQMRILERSGLGEETCLPPAIH---------YIPP 151 (496)
Q Consensus 84 ~~~~v~Iv~~~~y~P~~~~~v~~~~~~e~~~~~~~~~~~---~~~f~~~i~~~sGi~~r~~~~~~~~---------~~~~ 151 (496)
...+++|.++|+|+|+ ++++|+++.+.+..... +++ ..+.+++|++++||++|+++.+++. ...|
T Consensus 13 ~~~~~~I~~ig~~~P~--~~v~n~e~~~~~~~~~~-~~~~~~~~~~~~~i~~~tGI~~R~~~~~~e~~~~~~~~~~~~~p 89 (393)
T 3ov2_A 13 AQGPATIMAIGTATPP--NLYEQSTFPDFYFRVTN-SDDKQELKKKFRRMCEKTMVKKRYLHLTEEILKERPKLCSYKEA 89 (393)
T ss_dssp CSSCCEEEEEEEECCS--CEEEGGGHHHHHHHHTT-CTTCHHHHHHHHHHHHHTCCCEEECSCCHHHHHHSGGGGSSSSC
T ss_pred CCCCeEEEEEEeeCCC--cccCHHHHHHHHHHhhc-ccchHHHHHHHHHHHHhcCCceEEeecChhhhccCcccccCCCC
Confidence 4457999999999999 89999999998643221 232 2345678999999999999876541 1111
Q ss_pred --CCchHHHHHhHHHHHHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCCce-eeEecCCCcchHH
Q 011007 152 --TPTMEAARGEAELVIFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSNIK-SFNLSGMGCSAGL 228 (496)
Q Consensus 152 --~~~~~~~~~ea~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~~~-~~dl~g~gCsg~l 228 (496)
...++.+.+++.+|+.+|+++||+++|++|+|||.||++|++++..|+++++|+++||+++.+. +++++ +||+|++
T Consensus 90 ~~~~r~~~~~~~~~~La~~Aa~~aL~~ag~~~~dId~vi~~t~t~~~~p~~a~~v~~~LGl~~~~~~~~~v~-~~C~g~~ 168 (393)
T 3ov2_A 90 SFDDRQDIVVEEIPRLAKEAAEKAIKEWGRPKSEITHLVFCSISGIDMPGADYRLATLLGLPLTVNRLMIYS-QACHMGA 168 (393)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCGGGCCEEEEEESSCCCBSCHHHHHHHHHTCCTTSEEEEEES-CCTTHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEeCCCCCCCHHHHHHHHcCCCCCcceeeEEc-CccHHHH
Confidence 2345567788999999999999999999999999999998666889999999999999996554 89999 7999999
Q ss_pred HHHHHHHHHHhcCCCCEEEEEEECCCCCCCccCCCcc--ccccccccccccEEEEEeccCCcc-cccceeEeeEEEEEec
Q 011007 229 ISIDLARDLLQVHPNSNAVVVSTEIITPNYYQGNERA--MLLPNCLFRMGGAAILLSNRRRNR-SRAKYRLVHVVRTHKG 305 (496)
Q Consensus 229 ~al~lA~~lL~~~~~~~aLVVs~E~~s~~~~~~~dr~--~l~~~~lfgDGAaA~lLs~~~~~~-~~~~~~L~~~~~t~~~ 305 (496)
.||.+|.+++++++.++||||++|.+|.++.+++|+. .+.++.+|||||+|+||++++... ..+.|++.....+...
T Consensus 169 ~al~~A~~~i~sg~~~~vLvvg~E~~s~~~~~~~d~~~~~~~~~~lFGDGAaA~vl~~~~~~~~~~~~~~~~~~~~~~~p 248 (393)
T 3ov2_A 169 AMLRIAKDLAENNRGARVLVVACEITVLSFRGPNEGDFEALAGQAGFGDGAGAVVVGADPLEGIEKPIYEIAAAMQETVA 248 (393)
T ss_dssp HHHHHHHHHHHHSTTCEEEEEEEECGGGTCCCCCTTCHHHHHHHHHBCCEEEEEEEESSCCTTTCCCSEEEEEEEEEECT
T ss_pred HHHHHHHHHHHcCCCCEEEEEEEeccchhccCCcccchhhhcccccccCccEEEEEEecCCCcccCceeEEEecCcEEec
Confidence 9999999999999999999999999986576666652 234678999999999999876431 1123544322221111
Q ss_pred CCcccccceeecccCCCceeeeechhHHHHHHHHhhhhhhhcCCCccchhHHHHHHHHHHHHhhhcc-ccCCcccchhcc
Q 011007 306 ADDKAYRCVFEEEDKEGKVGISLSKDLMAIAGEALKSNITTIGPLVLPASEQLLFLMTLIGRKIFNP-KWKPYIPDFKQA 384 (496)
Q Consensus 306 ~d~~~~~~~~~~~d~~G~~g~~ls~d~~~v~g~~l~~~i~~~gp~vlp~~e~~~~~~~~~~~~v~~~-~~~~~~p~~~~d 384 (496)
..+... ...-. +.+..+.+++++++.+.+.+.. ..+++++. .+.. .+|
T Consensus 249 ~~~~~~---~~~~~-~~g~~~~~~~~v~~~~~~~~~~----------------------~i~~~L~~~gl~~-----~~d 297 (393)
T 3ov2_A 249 ESQGAV---GGHLR-AFGWTFYFLNQLPAIIADNLGR----------------------SLERALAPLGVRE-----WND 297 (393)
T ss_dssp TCTTSE---EEEEE-TTEEEEEECTTHHHHHHTTSHH----------------------HHHHHHGGGTCCS-----GGG
T ss_pred CCcccC---ceeee-CCceEEEECcHHHHHHHHHHHH----------------------HHHHHHHHcCCCc-----ccC
Confidence 111111 00001 1223456667777654322111 11233332 2221 266
Q ss_pred ccEEEeccCCHHHHHHHHHHcCCChhhHhhhhhhhcccCCccCCchHHHHHHHHHh----CCCCCC---CEEEEEeechh
Q 011007 385 FEHFCIHAGGRAVIDELQKNLQLSAEHVEASRMTLHRFGNTSSSSLWYEMSYIEEK----GRMKKG---DRVWQIAFGSG 457 (496)
Q Consensus 385 id~f~~H~~~~~v~~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~----g~i~~G---d~Vll~~fG~G 457 (496)
+ +|++||+|+++++.+++.||++++|+..++.++++||||||||+|+.|+++.++ |++++| |+|+++|||+|
T Consensus 298 i-~~v~Hq~n~~i~~~v~~~Lgl~~ek~~~s~~~l~~~GNtssAsip~~L~~~~~~~~~~g~~~~G~~~d~vll~~fG~G 376 (393)
T 3ov2_A 298 V-FWVAHPGNWAIIDAIEAKLQLSPDKLSTARHVFTEYGNMQSATVYFVMDELRKRSAVEGRSTTGDGLQWGVLLGFGPG 376 (393)
T ss_dssp S-EEEECCCCHHHHHHHHHHHTCCTTTTHHHHHHHHHHCBCGGGHHHHHHHHHHHHHHHTTCSBTTTTCSEEEEEEEETT
T ss_pred c-EEEECCCChHHHHHHHHHcCCCHHHHHHHHHHHHHhCChHHhHHHHHHHHHHHhhhhcCCcCCCCCCCeEEEEEECcc
Confidence 7 999999999999999999999999998778889999999999999999999876 999999 99999999999
Q ss_pred HhhhheeeEeec
Q 011007 458 FKCNSAVWKCNK 469 (496)
Q Consensus 458 ~~~~sav~r~~~ 469 (496)
++|++++||+..
T Consensus 377 ~t~~~~ll~~~~ 388 (393)
T 3ov2_A 377 LSIETVVLRSMP 388 (393)
T ss_dssp TEEEEEEEEECB
T ss_pred ceeeeeeeEEcc
Confidence 999999999863
No 9
>4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans}
Probab=100.00 E-value=1.2e-50 Score=414.65 Aligned_cols=319 Identities=19% Similarity=0.287 Sum_probs=251.4
Q ss_pred CceEEEEeeeecCCCCcccChHHHHHHHhhhhcCCcchHHHHHHHHHHcCCCceeecCCCCcCCCCCCchHHHHHhHHHH
Q 011007 86 RHVYLVDYACYKPPVTCRVPFATFMEHSRLILKNNPKSVEFQMRILERSGLGEETCLPPAIHYIPPTPTMEAARGEAELV 165 (496)
Q Consensus 86 ~~v~Iv~~~~y~P~~~~~v~~~~~~e~~~~~~~~~~~~~~f~~~i~~~sGi~~r~~~~~~~~~~~~~~~~~~~~~ea~~l 165 (496)
.+++|+++++|+|+ ++++|+++.+.+...+ .+... +||.+++||++|+++.+++. +.+|
T Consensus 10 m~v~I~g~g~~lP~--~~v~~~~l~~~l~~~~-~~~~~----~~i~~rtgi~~r~~~~~~~~--------------~~~l 68 (333)
T 4dfe_A 10 IYSRVLGTGSYLPP--NRVTNQDLAKRLAEQG-IETSD----EWIVARTGIHARYFAEPDVT--------------TSDL 68 (333)
T ss_dssp CEEEEEEEEEECCS--EEEEHHHHHHHHC----CCCCH----HHHHHHHCCSEEEECCTTCC--------------HHHH
T ss_pred cceEEEEEEEECCC--cEEcHHHHHHHhcccc-CCCCH----HHhHHhcCceEEEEcCCCCC--------------HHHH
Confidence 47999999999999 8999999999854321 12111 47999999999999877653 7899
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEeecc-CCCCCCcHHHHHHHHcCCCCCceeeEecCCCcchHHHHHHHHHHHHhcCCCC
Q 011007 166 IFSAMDSLLQKTGLKPKDIDILIVNCS-LFSPTPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLLQVHPNS 244 (496)
Q Consensus 166 a~~Aa~~aL~~agi~p~dID~LI~~ss-~~~~~Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL~~~~~~ 244 (496)
+.+|++++|+++|++|+|||.||++|+ +++..|+.+.+|+++||+++++.+++++ ++|++++.||.+|.+++++++.+
T Consensus 69 a~~Aa~~al~~ag~~~~~Id~vi~~t~~~~~~~p~~a~~v~~~lgl~~~~~~~~v~-~~C~s~~~al~~A~~~i~~g~~~ 147 (333)
T 4dfe_A 69 AFIASQRAIEAADIDPQSIDLIIVATSTPDFVFPSTACLLQNKLGIRNHGAAFDVQ-AVCSGFAYAVATADSFIRSGQHR 147 (333)
T ss_dssp HHHHHHHHHHHHTCCGGGCCEEEEECSSCSSSBSCHHHHHHHHTTCCSCCEEEEEE-CGGGHHHHHHHHHHHHHHTTSCS
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCCcHHHHHHHHhCCCCCCcEEEeC-cccHHHHHHHHHHHHHHHcCCCC
Confidence 999999999999999999999999875 5788999999999999997689999998 79999999999999999999999
Q ss_pred EEEEEEECCCCCCCccCCCccccccccccccccEEEEEeccCCcccccceeEeeEEEEEecCCcccccceeecccCCCce
Q 011007 245 NAVVVSTEIITPNYYQGNERAMLLPNCLFRMGGAAILLSNRRRNRSRAKYRLVHVVRTHKGADDKAYRCVFEEEDKEGKV 324 (496)
Q Consensus 245 ~aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAaA~lLs~~~~~~~~~~~~L~~~~~t~~~~d~~~~~~~~~~~d~~G~~ 324 (496)
+||||++|.+|.. .+++||. +.++|||||+|+||++.+.. . ++.++..+|++.++.++.+......
T Consensus 148 ~vLvvg~e~~s~~-~~~~d~~---~~~lfGDGA~A~vl~~~~~~------~---i~~~~~~~~g~~~~~~~~~~~~~~~- 213 (333)
T 4dfe_A 148 TALVIGAETFSRI-LDFKDRT---TCVLFGDGAGAVILQASDEP------G---VLASALHADGSHSNILCTPGNVNGG- 213 (333)
T ss_dssp EEEEEEEEEGGGG-CCTTCTT---TTTTBCEEEEEEEEEEESSC------S---EEEEEEEECGGGGGGEEBCEEEETT-
T ss_pred EEEEEEeeccccc-cCccccc---ceeeeccccEEEEEEEcCCC------C---eEEEEEEEccCCcCeEEECCCCCCc-
Confidence 9999999999973 4556765 46899999999999987632 2 3445667788777766554210000
Q ss_pred eeeechhHHHHHHHHhhhhhhhcCCCccchhHHHHHHHH---HHHHhhhcc-ccCCcccchhccccEEEeccCCHHHHHH
Q 011007 325 GISLSKDLMAIAGEALKSNITTIGPLVLPASEQLLFLMT---LIGRKIFNP-KWKPYIPDFKQAFEHFCIHAGGRAVIDE 400 (496)
Q Consensus 325 g~~ls~d~~~v~g~~l~~~i~~~gp~vlp~~e~~~~~~~---~~~~~v~~~-~~~~~~p~~~~did~f~~H~~~~~v~~~ 400 (496)
.+. . ...+...|+.+ +.+... ...++++++ .+. .+|||||++||+|+++++.
T Consensus 214 ~~~--~----------~~~~~~~g~~v------~~~~~~~~~~~i~~~l~~~gl~------~~did~~~~Hq~~~~i~~~ 269 (333)
T 4dfe_A 214 VVS--G----------SAFLHMDGQAV------FKLAVNVLEKVAVEALEKANLS------AEQIDWLIPHQANIRIMQS 269 (333)
T ss_dssp EEE--E----------CCSCEECHHHH------HHHHHHHHHHHHHHHHHHTTCC------GGGCSEEEECCSCHHHHHH
T ss_pred ccc--c----------CcceeeccHHH------HHHHHHHHHHHHHHHHHHcCCC------HHHCCEEEEcCCCHHHHHH
Confidence 000 0 00011111111 111111 112333332 232 4899999999999999999
Q ss_pred HHHHcCCChhhHhhhhhhhcccCCccCCchHHHHHHHHHhCCCCCCCEEEEEeechhHhhhheeeEe
Q 011007 401 LQKNLQLSAEHVEASRMTLHRFGNTSSSSLWYEMSYIEEKGRMKKGDRVWQIAFGSGFKCNSAVWKC 467 (496)
Q Consensus 401 i~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~i~~Gd~Vll~~fG~G~~~~sav~r~ 467 (496)
+++.||+++||+ ..++++||||||+|+|+.|++++++|++++||+|++++||+|++|+++||||
T Consensus 270 ~~~~lgl~~~~~---~~~l~~~GNt~sasi~~~L~~~~~~g~~~~Gd~vll~~~G~G~t~~~~ll~~ 333 (333)
T 4dfe_A 270 TCRKLGLPQERM---IVTVGEHGNTSAASIPLALDVAVRDGRIKRGQNVLIEGVGGGFTWGASVIRY 333 (333)
T ss_dssp HHHHTTCCGGGB---CCCHHHHCBCGGGHHHHHHHHHHHTTCSCTTCEEEEEEEETTTEEEEEEEEC
T ss_pred HHHHhCCCHHHh---hhhHHhcCchHHHHHHHHHHHHHHcCCCCCCCEEEEEEEchhheeEEEEEEC
Confidence 999999999999 5689999999999999999999999999999999999999999999999997
No 10
>4efi_A 3-oxoacyl-(acyl-carrier protein) synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.35A {Burkholderia xenovorans}
Probab=100.00 E-value=5.7e-51 Score=420.67 Aligned_cols=326 Identities=17% Similarity=0.208 Sum_probs=254.5
Q ss_pred CceEEEEeeeecCCCCcccChHHHHHHHhhhhcCCcchHHHHHHHHHHcCCCceeecCCCCcCCCCCCchHHHHHhHHHH
Q 011007 86 RHVYLVDYACYKPPVTCRVPFATFMEHSRLILKNNPKSVEFQMRILERSGLGEETCLPPAIHYIPPTPTMEAARGEAELV 165 (496)
Q Consensus 86 ~~v~Iv~~~~y~P~~~~~v~~~~~~e~~~~~~~~~~~~~~f~~~i~~~sGi~~r~~~~~~~~~~~~~~~~~~~~~ea~~l 165 (496)
++++|.++|+|+|+ ++++|+++.+.++. ++ .+||.+++||++|+++.+++. +.+|
T Consensus 15 ~~v~I~~ig~~lP~--~~v~n~~l~~~~~~----~~-----~~~i~~~tGI~~R~~a~~~~~--------------~~~L 69 (354)
T 4efi_A 15 QGARIAGVVSCVPS--KQVDNDYFVERFDA----SA-----VRDVVKMIGVNRRRWADAQTS--------------AGDL 69 (354)
T ss_dssp ESEEEEEEEEEECS--CEEEGGGGTTTSCH----HH-----HHHHHHHHCCSEEECCCTTCC--------------HHHH
T ss_pred cceEEEEEEEECCC--cEEcHHHHHHHhCC----Cc-----HHHHHHhcCCeEEEEcCCCCC--------------HHHH
Confidence 46999999999999 89999999876542 12 147999999999999887664 7899
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEeecc-CCCCCCcHHHHHHHHcCCCCCceeeEecCCCcchHHHHHHHHHHHHhcCCCC
Q 011007 166 IFSAMDSLLQKTGLKPKDIDILIVNCS-LFSPTPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLLQVHPNS 244 (496)
Q Consensus 166 a~~Aa~~aL~~agi~p~dID~LI~~ss-~~~~~Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL~~~~~~ 244 (496)
+.+|++++|+++|++|+|||.||++|+ +++..|+.+.+|+++||+++++.+++++ ++|+|++.||.+|.+++++++.+
T Consensus 70 a~~Aa~~aL~~agi~~~~Id~vi~~t~~~~~~~p~~a~~v~~~lGl~~~~~~~~v~-~aC~s~~~al~~A~~~i~~g~~~ 148 (354)
T 4efi_A 70 CRKAGEKLLAGLGWQADSIDALIFVSQTPNYRLPATAFVLQAELDLPASCLALDIN-LGCSGYPQALWLGMNLIQTGAAK 148 (354)
T ss_dssp HHHHHHHHHHHHTCCGGGCCEEEEECSSCSCSSSCHHHHHHHHTTCCTTSEEEEEC-CCTTHHHHHHHHHHHHHHTTSCS
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCCcHHHHHHHHcCcCCCccEEeeC-cccHHHHHHHHHHHHHHHCCCCC
Confidence 999999999999999999999999875 5788999999999999997689999998 79999999999999999999999
Q ss_pred EEEEEEECCCCCCCccCCCccccccccccccccEEEEEeccCCcccccceeEeeEEEEEecCCcccccceeecccCCCce
Q 011007 245 NAVVVSTEIITPNYYQGNERAMLLPNCLFRMGGAAILLSNRRRNRSRAKYRLVHVVRTHKGADDKAYRCVFEEEDKEGKV 324 (496)
Q Consensus 245 ~aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAaA~lLs~~~~~~~~~~~~L~~~~~t~~~~d~~~~~~~~~~~d~~G~~ 324 (496)
+||||++|.+|. +.+++||. +..+|||||+|+||++++... .+.+...++++.++.+..+.++.
T Consensus 149 ~vLvvg~e~~s~-~~~~~d~~---~~~lfGDGA~A~vl~~~~~~~---------~~~~~~~s~g~~~~~~~~~~~g~--- 212 (354)
T 4efi_A 149 RVLLAVGDTISK-MIDPTDRS---TSLLFGDAGTMTALETSNGDA---------AAHFIIGADGKGARNLIVPSGGF--- 212 (354)
T ss_dssp EEEEEEEECGGG-GCCTTCHH---HHTTBCCEEEEEEEEECCSCC---------EEEEEEEECGGGGGGEECCSSSS---
T ss_pred EEEEEEechhcc-cCCccccc---cccccccceeEEEEeecCCCC---------ceEEEEEEcCCCcceEEecCCCC---
Confidence 999999999997 44566776 578999999999999876431 12345667887777666543211
Q ss_pred eeeechhHHHHHHHH-hhhhhhhcCCCccchhHHHHHHHHH---HHHhhhcc-ccCCcccchhccccEEEeccCCHHHHH
Q 011007 325 GISLSKDLMAIAGEA-LKSNITTIGPLVLPASEQLLFLMTL---IGRKIFNP-KWKPYIPDFKQAFEHFCIHAGGRAVID 399 (496)
Q Consensus 325 g~~ls~d~~~v~g~~-l~~~i~~~gp~vlp~~e~~~~~~~~---~~~~v~~~-~~~~~~p~~~~did~f~~H~~~~~v~~ 399 (496)
. +.+.+... .+.. -...+...|+.+ +++.... ..++++++ .++ .+|||||++||+|+++++
T Consensus 213 ~-p~~~~~~~-~~~~~~~~~~~~~g~~v------~~~~~~~~~~~i~~~l~~~gl~------~~did~~v~Hq~~~~i~~ 278 (354)
T 4efi_A 213 K-PYDAAADE-RMAGKSPECLFMDGGEI------FNFTLNAVPKLVSRTLDIAGRD------KDSYDAFLFHQANLFMLK 278 (354)
T ss_dssp S-CCCGGGCG-GGTTCCTTSCEECHHHH------HHHHHHHHHHHHHHHHHHHTCC------GGGCSEEEECCCCHHHHH
T ss_pred C-CCcccccc-ccccccccceEEccHHH------HHHHHHHHHHHHHHHHHHcCCC------HHHCCEEEeCCCCHHHHH
Confidence 0 11111000 0000 000111112111 1111111 11233332 222 489999999999999999
Q ss_pred HHHHHcCCChhhHhhhhhhhcccCCccCCchHHHHHHHHHhCCCCCCCEEEEEeechhHhhhheeeEeecc
Q 011007 400 ELQKNLQLSAEHVEASRMTLHRFGNTSSSSLWYEMSYIEEKGRMKKGDRVWQIAFGSGFKCNSAVWKCNKT 470 (496)
Q Consensus 400 ~i~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~i~~Gd~Vll~~fG~G~~~~sav~r~~~~ 470 (496)
.+++.||++++|+ ..++++||||||+|+|+.|++++++|++++||+|++++||+|++|++++|||.+.
T Consensus 279 ~~~~~Lgl~~ek~---~~~l~~~GNt~sasi~~~L~~~~~~g~~~~Gd~vll~~fG~G~t~~~~ll~~~~~ 346 (354)
T 4efi_A 279 HLAKKAGLPAERV---PVNIGEYGNTSCASIPLLITTELKDRLKEETLQLGMFGFGVGYSWASAALAVGPL 346 (354)
T ss_dssp HHHHHTTCCGGGS---CCCHHHHCBCGGGHHHHHHHHHSHHHHHHSCEEEEEEEEETTTEEEEEEEEECCC
T ss_pred HHHHHhCcCHHHH---HHHHhhhCcHHHHHHHHHHHHHHHhCCCCCCCEEEEEEEchhhhheeeEEEECCc
Confidence 9999999999999 5789999999999999999999999999999999999999999999999999654
No 11
>3v7i_A Putative polyketide synthase; type III polyketide synthase, acyltransferase, transferase,; 2.90A {Streptomyces coelicolor}
Probab=100.00 E-value=5.7e-50 Score=420.25 Aligned_cols=353 Identities=19% Similarity=0.232 Sum_probs=262.2
Q ss_pred HHHhcCCCceEEEEeeeecCCCCcccChHHHHHHHhhhhcCCcchHHHHHHHHHHcCCCceeecCCCCcC----------
Q 011007 79 VYFMSKPRHVYLVDYACYKPPVTCRVPFATFMEHSRLILKNNPKSVEFQMRILERSGLGEETCLPPAIHY---------- 148 (496)
Q Consensus 79 ~~~~~~~~~v~Iv~~~~y~P~~~~~v~~~~~~e~~~~~~~~~~~~~~f~~~i~~~sGi~~r~~~~~~~~~---------- 148 (496)
+|.-+.+.++||.+++++.|+ ++++++++.+.+..... ++..++.+++|++++||++|++.-+.+..
T Consensus 18 ~~~~~~~m~~~i~~i~ta~P~--~~~~q~~~~~~~~~~~~-~~~~~~~~~~i~~~sgI~~R~~~l~~~~~~~~~~~~~~~ 94 (413)
T 3v7i_A 18 LYFQSNAMAAYLCAPAVIHGE--HSVETREIVEEVRGRHP-HAPWAPRIDGIAASTGIESRGWMLPLEAAVAPGGGGDLG 94 (413)
T ss_dssp ------CCCEEEECCEEEECS--EEEEHHHHHHHHHHHCS-SCSSGGGHHHHHHHHTCSEEEESSCHHHHHSCCCCCCCH
T ss_pred hhhccCCCCeEEEeeEeeCCC--cccCHHHHHHHHHHhcc-cchhHHHHHHHHHhCCcCeeeeecCHHHhcccccccccc
Confidence 355555567999999999999 89999999998865322 11223335799999999999986442211
Q ss_pred -------------------------CCCCCchH----HHHHhHHHHHHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCc
Q 011007 149 -------------------------IPPTPTME----AARGEAELVIFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPS 199 (496)
Q Consensus 149 -------------------------~~~~~~~~----~~~~ea~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps 199 (496)
+.....+. ...+++.+|+.+|+++||+++|++|+|||.||++|++++..|+
T Consensus 95 ~~~~~~~~~~~~n~~l~~~~~~~e~i~~rtgi~~R~~~~~~~~~~La~~Aa~~AL~~agi~~~dId~li~~t~t~~~~P~ 174 (413)
T 3v7i_A 95 AAREALVRDGFTEQDANRAIAALKAVPASQTVQERTAPAWEAVQAYGERAARGALQIAGLDVADVDCLITSNSTTPALPG 174 (413)
T ss_dssp HHHHHC------CHHHHHHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCCEEEEECCSSCCSSC
T ss_pred cccccccccccchhhhhhhcCcccceecCCCHHHhCcccccCHHHHHHHHHHHHHHHhCcCHHHCCEEEEEccCCCCcCH
Confidence 01112222 2346799999999999999999999999999999876678999
Q ss_pred HHHHHHHHcCCCCCceeeEecCCCcchHHHHHHHHHHHHhcCCCCEEEEEEECCCCCCCccCCCccc--ccccccccccc
Q 011007 200 LSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLLQVHPNSNAVVVSTEIITPNYYQGNERAM--LLPNCLFRMGG 277 (496)
Q Consensus 200 ~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL~~~~~~~aLVVs~E~~s~~~~~~~dr~~--l~~~~lfgDGA 277 (496)
.+.+|+++||+++++.++++.++||+||+.||.+|.+++++++.++||||++|.+|. +++++||+. ++.+.+|||||
T Consensus 175 ~a~~v~~~LGl~~~~~~~~v~~~~Cagg~~AL~~A~~~i~ag~~~~vLvvg~E~~S~-~~~~~d~~~~~lv~~~LFGDGA 253 (413)
T 3v7i_A 175 LDVALANRLPLRGDTMLLPATQWACVAGTRSLALAADLVAADPDRVVLVVISEALST-TYQPADDTLESLIVRLLFADTA 253 (413)
T ss_dssp HHHHHHHHTTCCTTCEEEEESSCGGGHHHHHHHHHHHHHHHCTTCEEEEEEEECGGG-GCCSSCCSTTHHHHHHHBCCEE
T ss_pred HHHHHHHHhCCCCCceEEEeeCCccHHHHHHHHHHHHHHhcCCCCEEEEEEEecccc-ccCccccchhhhhcceeecccc
Confidence 999999999999779999994489999999999999999999999999999999997 445667652 45578999999
Q ss_pred EEEEEeccCCcccccceeEeeEEEEEecCCcccccceeecccCCCceeeeechhHHHHHHHHhhhhhhhcCCCccchhHH
Q 011007 278 AAILLSNRRRNRSRAKYRLVHVVRTHKGADDKAYRCVFEEEDKEGKVGISLSKDLMAIAGEALKSNITTIGPLVLPASEQ 357 (496)
Q Consensus 278 aA~lLs~~~~~~~~~~~~L~~~~~t~~~~d~~~~~~~~~~~d~~G~~g~~ls~d~~~v~g~~l~~~i~~~gp~vlp~~e~ 357 (496)
+|+||++++... ..|++.+... ....+.. +.+....++ .+..+.++++++..... +..
T Consensus 254 aAvvl~~~~~~~--~~~~l~~~~~-~~~p~~~--~~~~~~~~~-~g~~~~m~~~v~~~v~~-~~~--------------- 311 (413)
T 3v7i_A 254 VAAVVTGRPRPE--SVLRLDAAWH-HTLPGTR--DLHRLETRA-DGTHFVMDRRGPRAVQE-TVT--------------- 311 (413)
T ss_dssp EEEEEESSCCTT--EEEEEEEEEE-EECTTCT--TSEEEEEET-TEEEEEECTTHHHHHHH-HHH---------------
T ss_pred EEEEEEecCCCC--CCEEEEcccc-EEeCCCc--cccCccccC-CceEEEECcHHHHHHHH-HHH---------------
Confidence 999999876421 3566644322 2222221 111111122 22456677666532211 111
Q ss_pred HHHHHHHHHHhhhccccCCcccchhccccEEEeccCCHHHHHHHHHHcC--CChhhHhhhhhhhcccCCccCCchHHHHH
Q 011007 358 LLFLMTLIGRKIFNPKWKPYIPDFKQAFEHFCIHAGGRAVIDELQKNLQ--LSAEHVEASRMTLHRFGNTSSSSLWYEMS 435 (496)
Q Consensus 358 ~~~~~~~~~~~v~~~~~~~~~p~~~~did~f~~H~~~~~v~~~i~~~Lg--l~~e~~~~S~~~l~r~GNtsSaSi~~~La 435 (496)
..++++++......... + ||+|++||+|+++++.+++.|| +++||+.+|+.+++ ||||||||+|+.|+
T Consensus 312 -------~i~~~L~~~~~~~~~gl-~-id~~v~Hq~~~~il~~v~~~Lg~~l~~ek~~~s~~~l~-~GNtssAsi~~~L~ 381 (413)
T 3v7i_A 312 -------AMWEWLRVRYEDDPSSW-H-PDVLLAHPGGTRVLEYMEQTMPDEWPSGLLSYSRDSYT-SGNRGGAAVFDILR 381 (413)
T ss_dssp -------HHHHHHHHHTSSSCTTC-C-CCEEEEECSSHHHHHHHHHHSCSSCCSCSTHHHHHHHT-TCBCGGGHHHHHHH
T ss_pred -------HHHHHHhhccccccCCC-c-eeEEEECCCChHHHHHHHHHhCCCCCHHHhhccceEec-eeChHHHHHHHHHH
Confidence 11233331110001111 2 9999999999999999999999 99999998999999 99999999999999
Q ss_pred HHHHhCCCCCCCEEEEEeechhHhhhheeeEee
Q 011007 436 YIEEKGRMKKGDRVWQIAFGSGFKCNSAVWKCN 468 (496)
Q Consensus 436 ~~~~~g~i~~Gd~Vll~~fG~G~~~~sav~r~~ 468 (496)
++. +|++++||+++++|||+|++|++++|||+
T Consensus 382 ~~~-~~~~~~Gd~vll~~fG~Glt~~~~ll~w~ 413 (413)
T 3v7i_A 382 RAH-DAGQKTGSRAVLYAAAPGLTATALEGEWL 413 (413)
T ss_dssp HHH-HHCCCTTCEEEEEEEETTTEEEEEEEEEC
T ss_pred HHH-hCCCCCCCEEEEEEECHHHhHhhhheEeC
Confidence 999 78999999999999999999999999995
No 12
>2h84_A Steely1; thiolase-fold, type III polyketide synthase, PKS, chalcone-S synthase superfamily, type I PKS; HET: P6G; 2.90A {Dictyostelium discoideum}
Probab=100.00 E-value=3.1e-49 Score=409.94 Aligned_cols=355 Identities=17% Similarity=0.252 Sum_probs=266.6
Q ss_pred HhcCCCceEEEEeeeecCCCCcccChHHHHHHHhhhhcCCcchHHHHHHHHHHcCCCceeecCCCCcCC------CCCCc
Q 011007 81 FMSKPRHVYLVDYACYKPPVTCRVPFATFMEHSRLILKNNPKSVEFQMRILERSGLGEETCLPPAIHYI------PPTPT 154 (496)
Q Consensus 81 ~~~~~~~v~Iv~~~~y~P~~~~~v~~~~~~e~~~~~~~~~~~~~~f~~~i~~~sGi~~r~~~~~~~~~~------~~~~~ 154 (496)
.|+++++++|+++++|+|+ .+++|+++.+.++.....+++..++.+||++++||++|+++.++.... .+...
T Consensus 7 ~~~~~~~v~I~g~g~~~P~--~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~ 84 (374)
T 2h84_A 7 SYKSNNNSFVLGIGISVPG--EPISQQSLKDSISNDFSDKAETNEKVKRIFEQSQIKTRHLVRDYTKPENSIKFRHLETI 84 (374)
T ss_dssp -----CCCEEEEEEEECSS--SCEEHHHHHHHHHHHSCSCHHHHHHHHHHHHTTCCCEECCSSCTTSGGGCGGGGGGCCH
T ss_pred hccCCCCeEEEEEEEeCCC--cccCHHHHHHHHHHhhccChHHHHHHHHHHHhCCcCcceeecCccccccccccCChHHH
Confidence 3677889999999999999 889999999887642211333445678899999999999875541100 01122
Q ss_pred hHH---HHHhHHHHHHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCCceeeEecCCCcchHHHHH
Q 011007 155 MEA---ARGEAELVIFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISI 231 (496)
Q Consensus 155 ~~~---~~~ea~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al 231 (496)
++. +++.+.+|+.+|+++||+++|++|+|||.||++|+.++..|+.+.+|+++||+++++.++++++++|++++.||
T Consensus 85 ~~~~~~~~~~~~~la~~Aa~~al~~ag~~~~~id~vi~~t~~~~~~p~~a~~v~~~lGl~~~~~~~~v~~~aCss~~~al 164 (374)
T 2h84_A 85 TDVNNQFKKVVPDLAQQACLRALKDWGGDKGDITHIVSVTSTGIIIPDVNFKLIDLLGLNKDVERVSLNLMGCLAGLSSL 164 (374)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSCCCSSCHHHHHHHHHTCCTTCEEEEEESCGGGHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeeCCCCCCcHHHHHHHHcCcCCCCceEEecCCcCHHHHHHH
Confidence 222 55789999999999999999999999999999887667899999999999999867899999756999999999
Q ss_pred HHHHHHHhcCCCCEEEEEEECCCCCCCccCCCccccccccccccccEEEEEeccCCcccccceeEeeEEEEEecCCcccc
Q 011007 232 DLARDLLQVHPNSNAVVVSTEIITPNYYQGNERAMLLPNCLFRMGGAAILLSNRRRNRSRAKYRLVHVVRTHKGADDKAY 311 (496)
Q Consensus 232 ~lA~~lL~~~~~~~aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAaA~lLs~~~~~~~~~~~~L~~~~~t~~~~d~~~~ 311 (496)
.+|.++|++++.++|||+++|.+|..++.+.||..+...++|||||+|+||++.+....++.|++.+...... .++...
T Consensus 165 ~~A~~~i~~g~~~~vLv~g~e~~s~~~~~~~dr~~~~~~~lfGDGA~A~vL~~~~~~~~~~~~~l~~~g~~~~-~~~~~~ 243 (374)
T 2h84_A 165 RTAASLAKASPRNRILVVCTEVCSLHFSNTDGGDQMVASSIFADGSAAYIIGCNPRIEETPLYEVMCSINRSF-PNTENA 243 (374)
T ss_dssp HHHHHHHTTCTTCEEEEEEEECCGGGCCCSSSHHHHHHHHHBCCEEEEEEEESSCCTTCCCCEEEEEEEEEEC-SSCTTS
T ss_pred HHHHHHHHcCCCCEEEEEEEEecchhhcCCCCHHHHhhhhhhccCcEEEEEecCCCcccCCceeEEeeeeEEe-CCCccc
Confidence 9999999999999999999999987555667776545578999999999999876422223466554332222 222111
Q ss_pred cceeecccCCCceeeeechhHHHHHHHHhhhhhhhcCCCccchhHHHHHHHHHHHHhhhcc-c--cCCcccchhccccEE
Q 011007 312 RCVFEEEDKEGKVGISLSKDLMAIAGEALKSNITTIGPLVLPASEQLLFLMTLIGRKIFNP-K--WKPYIPDFKQAFEHF 388 (496)
Q Consensus 312 ~~~~~~~d~~G~~g~~ls~d~~~v~g~~l~~~i~~~gp~vlp~~e~~~~~~~~~~~~v~~~-~--~~~~~p~~~~did~f 388 (496)
..... ..+| ..+.++++++..+.+.+...+ +++++. . .+.|+. .+|||+|
T Consensus 244 ~~~~~--~~~g-~~~~~~~~v~~~~~~~~~~~i----------------------~~~L~~ag~~~~~~l~--~~did~~ 296 (374)
T 2h84_A 244 MVWDL--EKEG-WNLGLDASIPIVIGSGIEAFV----------------------DTLLDKAKLQTSTAIS--AKDCEFL 296 (374)
T ss_dssp EEEEE--ETTE-EEEEECTTHHHHHHHHHHHHH----------------------HHHHHHHTTTSCSCCC--SSSSEEE
T ss_pred ceeEE--ecCc-EEEEeCchHHHHHHHHHHHHH----------------------HHHHHhcCCccccCCC--hhhcCEe
Confidence 11111 1122 234456677765543332222 223321 1 111121 3899999
Q ss_pred EeccCCHHHHHHHHHHcCCChhhHhhhhhhhcccCCccCCchHHHHHHHHHhCCCCCCCEEEEEeechhHhhhheeeEee
Q 011007 389 CIHAGGRAVIDELQKNLQLSAEHVEASRMTLHRFGNTSSSSLWYEMSYIEEKGRMKKGDRVWQIAFGSGFKCNSAVWKCN 468 (496)
Q Consensus 389 ~~H~~~~~v~~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~i~~Gd~Vll~~fG~G~~~~sav~r~~ 468 (496)
+||+|+++++.+++.||++++++..|+.++++||||||+|+|+.|++++++|+ +||+|++++||+|++|++++||+.
T Consensus 297 -~H~~~~~i~d~~~~~lgl~~~k~~~s~~~~~~~Gnt~sasi~~~L~~~~~~~~--~Gd~vll~~~G~G~t~~~~ll~~~ 373 (374)
T 2h84_A 297 -IHTGGKSILMNIENSLGIDPKQTKNTWDVYHAYGNMSSASVIFVMDHARKSKS--LPTYSISLAFGPGLAFEGCFLKNV 373 (374)
T ss_dssp -ECCCCHHHHHHHHHHTTCCGGGGHHHHHHHHHHCBCTTHHHHHHHHHHHTCSC--CCSEEEEEEEETTTEEEEEEEEEC
T ss_pred -ECCCCHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchhhHHHHHHHHHHhhcC--CCCeEEEEEeccchhhhhhhheec
Confidence 99999999999999999999999877788999999999999999999999887 899999999999999999999986
No 13
>3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A*
Probab=100.00 E-value=1.4e-49 Score=411.06 Aligned_cols=326 Identities=18% Similarity=0.295 Sum_probs=250.3
Q ss_pred CCceEEEEeeeecCCCCcccChHHHHHHHhhhhcCCcchHHHHHHHHHHcCCCceeecCCCCcCCCCCCchHHHHHhHHH
Q 011007 85 PRHVYLVDYACYKPPVTCRVPFATFMEHSRLILKNNPKSVEFQMRILERSGLGEETCLPPAIHYIPPTPTMEAARGEAEL 164 (496)
Q Consensus 85 ~~~v~Iv~~~~y~P~~~~~v~~~~~~e~~~~~~~~~~~~~~f~~~i~~~sGi~~r~~~~~~~~~~~~~~~~~~~~~ea~~ 164 (496)
+++++|.++++|+|+ ++++|+++.+.++. ++ +||.+++||++|+++++++. +.+
T Consensus 23 ~~~~~I~~~g~~~P~--~~v~~~~l~~~~~~----~~------~~i~~~tGi~~R~~a~~~~~--------------~~~ 76 (359)
T 3h78_A 23 QGNPILAGLGFSLPK--RQVSNHDLVGRINT----SD------EFIVERTGVRTRYHVEPEQA--------------VSA 76 (359)
T ss_dssp -CCCEEEEEEEECCS--EEEEHHHHTTTSSC----CH------HHHHHHHCCCEEEECCTTCC--------------THH
T ss_pred CCCcEEEEEEEECCC--ceEcHHHHHHHhCC----CH------HHHHHhcCceEEEEcCCCCC--------------HHH
Confidence 467999999999999 89999999877552 33 37999999999999987764 578
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEeecc-CCCCCCcHHHHHHHHcCCCCCceeeEecCCCcchHHHHHHHHHHHHhcCCC
Q 011007 165 VIFSAMDSLLQKTGLKPKDIDILIVNCS-LFSPTPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLLQVHPN 243 (496)
Q Consensus 165 la~~Aa~~aL~~agi~p~dID~LI~~ss-~~~~~Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL~~~~~ 243 (496)
|+.+|++++|+++|++|+|||.||++|+ +++..|+.+.+|+++||++ ++.+++++ ++|++++.||.+|.+++++++.
T Consensus 77 La~~Aa~~aL~~agl~~~dId~vi~~t~~~~~~~p~~a~~v~~~lGl~-~~~~~~v~-~aC~s~~~Al~~A~~~i~sG~~ 154 (359)
T 3h78_A 77 LMVPAARQAIEAAGLLPEDIDLLLVNTLSPDHHDPSQACLIQPLLGLR-HIPVLDIR-AQASGLLYGLQMARGQILAGLA 154 (359)
T ss_dssp HHHHHHHHHHHHTTCCGGGCCEEEEECSSCSSSBSCHHHHHHHHHTCC-SCCEEEEE-CGGGHHHHHHHHHHHHHHTTSC
T ss_pred HHHHHHHHHHHhcCCCHHHCCEEEEEeCCCCCCCCcHHHHHHHHcCCC-CCcEEEEC-CHhHHHHHHHHHHHHHHHCCCc
Confidence 9999999999999999999999999875 5688999999999999998 79999999 6999999999999999999999
Q ss_pred CEEEEEEECCCCCCCccCCC--ccccccccccccccEEEEEeccCCcccccceeEeeEEEEEecCCcccccceeecccCC
Q 011007 244 SNAVVVSTEIITPNYYQGNE--RAMLLPNCLFRMGGAAILLSNRRRNRSRAKYRLVHVVRTHKGADDKAYRCVFEEEDKE 321 (496)
Q Consensus 244 ~~aLVVs~E~~s~~~~~~~d--r~~l~~~~lfgDGAaA~lLs~~~~~~~~~~~~L~~~~~t~~~~d~~~~~~~~~~~d~~ 321 (496)
++||||++|.+|. ..+++| |. +..+|||||+|+||++++.. ... ++.+...++++.++.+..+.+
T Consensus 155 ~~vLvvg~e~~S~-~~~~~d~~~~---t~~lfGDGAaA~vl~~~~~~----~~~---i~~~~~~s~g~~~~~~~~~~~-- 221 (359)
T 3h78_A 155 RHVLVVCGEVLSK-RMDCSDRGRN---LSILLGDGAGAVVVSAGESL----EDG---LLDLRLGADGNYFDLLMTAAP-- 221 (359)
T ss_dssp SEEEEEEEEECGG-GCCCSTTTHH---HHTTBCEEEEEEEEECCSCS----SSE---EEEEEEEECGGGGGGEEBCCS--
T ss_pred CEEEEEEEchhcc-cCCccccccc---ccceecceeEEEEEEecCCC----CCc---eEEEEEEEccCccceEEeCCC--
Confidence 9999999999997 345566 55 56899999999999987641 112 344566678777766654431
Q ss_pred CceeeeechhHHHHHHHHhhhhhhhcCCCccchhHHHHHHHHH---HHHhhhcc-ccCCcccchhccccEEEeccCCHHH
Q 011007 322 GKVGISLSKDLMAIAGEALKSNITTIGPLVLPASEQLLFLMTL---IGRKIFNP-KWKPYIPDFKQAFEHFCIHAGGRAV 397 (496)
Q Consensus 322 G~~g~~ls~d~~~v~g~~l~~~i~~~gp~vlp~~e~~~~~~~~---~~~~v~~~-~~~~~~p~~~~did~f~~H~~~~~v 397 (496)
|......+.+...... ...+...|+.+ +.+.... ..++++++ .+. .+|||+|++||+|+++
T Consensus 222 g~~~~~~~~~~~~~~~---~~~~~m~g~~v------~~~~~~~~~~~i~~~L~~~gl~------~~did~~v~Hq~n~~i 286 (359)
T 3h78_A 222 GSASPTFLDENVLREG---GGEFLMRGRPM------FEHASQTLVRIAGEMLAAHELT------LDDIDHVICHQPNLRI 286 (359)
T ss_dssp STTSSSTTCHHHHHTT---TTSCEECHHHH------HHHHHHHHHHHHHHHHHHTTCC------GGGCSEEEECCSCHHH
T ss_pred CCccCCcccccccccc---CCceEeccHHH------HHHHHHHHHHHHHHHHHHcCCC------HHHCCEEEECCCCHHH
Confidence 1000000000000000 00111112111 1111111 12333332 222 4899999999999999
Q ss_pred HHHHHHHcCCChhhHhhhhhhhcccCCccCCchHHHHHHHHHhCCCCCCCEEEEEeechhHhhhheeeEeeccC
Q 011007 398 IDELQKNLQLSAEHVEASRMTLHRFGNTSSSSLWYEMSYIEEKGRMKKGDRVWQIAFGSGFKCNSAVWKCNKTI 471 (496)
Q Consensus 398 ~~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~i~~Gd~Vll~~fG~G~~~~sav~r~~~~~ 471 (496)
++.+++.||++++|+ ..++++||||||||+|+.|++++++ +++||+|++++||+|++|+++++||.+.+
T Consensus 287 ~~~~~~~lgl~~ek~---~~~l~~~GNt~sAsi~l~L~~~~~~--l~~Gd~vll~~fG~G~t~~~~ll~~~~~~ 355 (359)
T 3h78_A 287 LDAVQEQLGIPQHKF---AVTVDRLGNMASASTPVTLAMFWPD--IQPGQRVLVLTYGSGATWGAALYRKPEEV 355 (359)
T ss_dssp HHHHHHHHTCCGGGB---CCCHHHHCBCGGGHHHHHHHHHGGG--SCTTCEEEEEEEETTTEEEEEEEECC---
T ss_pred HHHHHHHhCcCHHHh---hhhhhcccchHHHHHHHHHHHHHHh--CCCCCEEEEEEEchhhhheeeeEEehhhh
Confidence 999999999999999 5689999999999999999999887 99999999999999999999999995543
No 14
>1i88_A CHS2, chalcone synthase 2; polyketide synthase, transferase; 1.45A {Medicago sativa} SCOP: c.95.1.2 c.95.1.2 PDB: 1i89_A 1i86_A 1i8b_A 1bi5_A 1cml_A* 1d6f_A* 1chw_A* 1cgz_A* 1cgk_A* 1bq6_A* 1jwx_A 1d6i_A 1d6h_A* 1u0v_A 1u0w_A* 1z1e_A* 1z1f_A*
Probab=100.00 E-value=2.1e-48 Score=406.27 Aligned_cols=350 Identities=19% Similarity=0.259 Sum_probs=265.7
Q ss_pred cCCCceEEEEeeeecCCCCcccChHHHHHHHhhhhcC--CcchHHHHHHHHHHcCCCceeecCCCCc-----------CC
Q 011007 83 SKPRHVYLVDYACYKPPVTCRVPFATFMEHSRLILKN--NPKSVEFQMRILERSGLGEETCLPPAIH-----------YI 149 (496)
Q Consensus 83 ~~~~~v~Iv~~~~y~P~~~~~v~~~~~~e~~~~~~~~--~~~~~~f~~~i~~~sGi~~r~~~~~~~~-----------~~ 149 (496)
+.+.+++|+++|+|+|+ ++++|+++.+.+...... .++..++.+||++++||++|+++.+++. ..
T Consensus 12 ~~~~~~~I~g~g~~~P~--~~v~n~~l~~~~~~~~~~~~~~~~~~~~~~i~~~tGI~~R~~~~~~~~~~~~p~~~~~~~~ 89 (389)
T 1i88_A 12 RAEGPATILAIGTANPA--NCVEQSTYPDFYFKITNSEHKTELKEKFQRMCDKSMIKRRYMYLTEEILKENPNVCEYMAP 89 (389)
T ss_dssp SCCSCCEEEEEEEECCS--CEEEGGGHHHHHHHHTTCTTCHHHHHHHHHHHHHSCCCEEECSCCHHHHHHCHHHHSSSCS
T ss_pred cCCCCeEEEEEEeeCCC--cccCHHHHHHHHHHhcccccchhHHHHHHHHHHhCCCCceeeecChhhhccCcchhcccCC
Confidence 34568999999999999 889999999876432110 1222345679999999999999865420 00
Q ss_pred CCCCchHHHHHhHHHHHHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCCce-eeEecCCCcchHH
Q 011007 150 PPTPTMEAARGEAELVIFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSNIK-SFNLSGMGCSAGL 228 (496)
Q Consensus 150 ~~~~~~~~~~~ea~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~~~-~~dl~g~gCsg~l 228 (496)
.....++.+.+.+.+|+.+|+++||+++|++|+|||.||++|++++..|+.+.+|+++||+++.+. +++++ ++|+|++
T Consensus 90 ~~~~r~~~~~~~~~~La~~Aa~~aL~~agl~~~~Id~li~~t~~~~~~p~~a~~v~~~lGl~~~~~~~~~v~-~aC~~~~ 168 (389)
T 1i88_A 90 SLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIVCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQ-QGAFAGG 168 (389)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSCCCSSCHHHHHHHHHTCCTTCEEEEEES-CCTTHHH
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEECCCCCCchHHHHHHHHcCcCCCchhheeEC-CccHHHH
Confidence 012245566788999999999999999999999999999998766889999999999999986565 99999 6999999
Q ss_pred HHHHHHHHHHhcCCCCEEEEEEECCCCCCCccCCC--ccccccccccccccEEEEEeccCCcc-cccceeEeeEEEEEec
Q 011007 229 ISIDLARDLLQVHPNSNAVVVSTEIITPNYYQGNE--RAMLLPNCLFRMGGAAILLSNRRRNR-SRAKYRLVHVVRTHKG 305 (496)
Q Consensus 229 ~al~lA~~lL~~~~~~~aLVVs~E~~s~~~~~~~d--r~~l~~~~lfgDGAaA~lLs~~~~~~-~~~~~~L~~~~~t~~~ 305 (496)
.||.+|.+++++++.++||||++|.+|..++++.| ++...+..+|||||+|+||++.+... ..+.|++......+..
T Consensus 169 ~al~~A~~~i~~g~~~~vLvvg~E~~s~~~~~~~d~~~~~~~~~~lfGDGA~A~vl~~~~~~~~~~~~~~l~~~~~~~~p 248 (389)
T 1i88_A 169 TVLRLAKDLAENNKGARVLVVCSEVTAVTFRGPSDTHLDSLVGQALFGDGAAALIVGSDPVPEIEKPIFEMVWTAQTIAP 248 (389)
T ss_dssp HHHHHHHHHHHTSTTCEEEEEEEECGGGTCCCCCTTCHHHHHHHHHBCCEEEEEEEESSCCTTTSCCCEEEEEEEEEECT
T ss_pred HHHHHHHHHHHcCCCCEEEEEEEecccHhHcCccccccccccccceEecceEEEEEecCCCCccCCCceEEEeeeeEEcC
Confidence 99999999999999999999999999875555544 22233578999999999999865421 1123565543332222
Q ss_pred CCcccccceeecccCCCceeeeechhHHHHHHHHhhhhhhhcCCCccchhHHHHHHHHHHHHhhhcc-ccCCcccchhcc
Q 011007 306 ADDKAYRCVFEEEDKEGKVGISLSKDLMAIAGEALKSNITTIGPLVLPASEQLLFLMTLIGRKIFNP-KWKPYIPDFKQA 384 (496)
Q Consensus 306 ~d~~~~~~~~~~~d~~G~~g~~ls~d~~~v~g~~l~~~i~~~gp~vlp~~e~~~~~~~~~~~~v~~~-~~~~~~p~~~~d 384 (496)
..+..+..-. . +.+..+.+++++++.+.+.+...+ ++++++ .+. | .+|
T Consensus 249 ~~~~~~~~~~-~---~~g~~~~~~~~v~~~~~~~~~~~i----------------------~~~L~~~gl~----d-~~d 297 (389)
T 1i88_A 249 DSEGAIDVHL-R---EAGLTFHLLKDVPGIVSKNITKAL----------------------VEAFEPLGIS----D-YNS 297 (389)
T ss_dssp TCTTSEEEEE-E---TTEEEEEECSCHHHHHHHHHHHHH----------------------HHHHGGGTCC----C-TTS
T ss_pred CCcccceeEE-e---cCceEEEeccHHHHHHHHHHHHHH----------------------HHHHHhcCCC----c-hhh
Confidence 2211111111 1 122345667777766544332222 233332 221 2 367
Q ss_pred ccEEEeccCCHHHHHHHHHHcCCChhhHhhhhhhhcccCCccCCchHHHHHHHHHhCCCCCC--------CEEEEEeech
Q 011007 385 FEHFCIHAGGRAVIDELQKNLQLSAEHVEASRMTLHRFGNTSSSSLWYEMSYIEEKGRMKKG--------DRVWQIAFGS 456 (496)
Q Consensus 385 id~f~~H~~~~~v~~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~i~~G--------d~Vll~~fG~ 456 (496)
+ +|++||+|+++++.+++.||++++|+..+++++++||||||||+|+.|++++++|+ ++| |+|+++|||+
T Consensus 298 i-~~v~Hq~~~~i~~~~~~~lgl~~ek~~~~~~~l~~~GNtssAsi~~~L~~~~~~g~-~~G~~~~g~~~d~vll~~fG~ 375 (389)
T 1i88_A 298 I-FWIAHPGGPAILDQVEQKLALKPEKMNATREVLSEYGNMSSACVLFILDEMRKKST-QNGLKTTGEGLEWGVLFGFGP 375 (389)
T ss_dssp S-EEEECCSCHHHHHHHHHHHTCCGGGGHHHHHHHHHHCBCGGGHHHHHHHHHHHHHH-HTTCSBTTTTCSEEEEEEEET
T ss_pred c-eEEECCCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchhhHHHHHHHHHHHhcc-ccCCcccCCCCceEEEEEecC
Confidence 7 89999999999999999999999999877788999999999999999999999988 888 9999999999
Q ss_pred hHhhhheeeEee
Q 011007 457 GFKCNSAVWKCN 468 (496)
Q Consensus 457 G~~~~sav~r~~ 468 (496)
|++|++++||+.
T Consensus 376 G~t~~~~ll~~~ 387 (389)
T 1i88_A 376 GLTIETVVLRSV 387 (389)
T ss_dssp TTEEEEEEEEEC
T ss_pred ccEEEEEEEEec
Confidence 999999999986
No 15
>3awk_A Chalcone synthase-like polyketide synthase; type III polyketide synthase, transferase; 2.00A {Huperzia serrata} PDB: 3awj_A
Probab=100.00 E-value=3.4e-48 Score=406.42 Aligned_cols=349 Identities=17% Similarity=0.244 Sum_probs=264.9
Q ss_pred CCCceEEEEeeeecCCCCcccChHHHHHHHhhhhcC--CcchHHHHHHHHHHcCCCceeecCCCCc-------CCC----
Q 011007 84 KPRHVYLVDYACYKPPVTCRVPFATFMEHSRLILKN--NPKSVEFQMRILERSGLGEETCLPPAIH-------YIP---- 150 (496)
Q Consensus 84 ~~~~v~Iv~~~~y~P~~~~~v~~~~~~e~~~~~~~~--~~~~~~f~~~i~~~sGi~~r~~~~~~~~-------~~~---- 150 (496)
.+.+++|+++|+|+|+ ++++|+++.+.+...... .++..++.+||++++||++|+++.+++. ..+
T Consensus 26 ~~~~~~I~g~g~~~P~--~~v~n~~l~~~~~~~~~~~~~~~~~~~~~~i~~~tGI~~R~~a~~~~~~~~~p~~~~~~~~~ 103 (402)
T 3awk_A 26 PDGPATILAIGTSNPT--NIFEQSTYPDFFFDVTNCNDKTELKKKFQRICDKSGIKKRHFHLTDEILRKNPSICKFKEAS 103 (402)
T ss_dssp CCSCEEEEEEEEECCS--EEEESTTHHHHHHHHTTCTTCHHHHHHHHHHHHHSSCSEEEESCCHHHHHHSGGGGSSSSSC
T ss_pred CCCCeEEEEEEecCCC--CccCHHHHHHHHHHhhcccchhhHHHHHHHHHHhcCcCceEEeeChhhhccCcccccccCCC
Confidence 3457999999999999 899999999876431110 1222345679999999999999865420 000
Q ss_pred CCCchHHHHHhHHHHHHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCCce-eeEecCCCcchHHH
Q 011007 151 PTPTMEAARGEAELVIFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSNIK-SFNLSGMGCSAGLI 229 (496)
Q Consensus 151 ~~~~~~~~~~ea~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~~~-~~dl~g~gCsg~l~ 229 (496)
....++.+.+.+.+|+.+|+++||+++|++|+|||.||++|+.++..|+.+.+|+++||+++.+. +++++ ++|+|++.
T Consensus 104 ~~~r~~~~~~~~~~La~~Aa~~aL~~agl~~~~Id~vi~~t~~~~~~p~~a~~v~~~lGl~~~~~~~~~v~-~aC~s~~~ 182 (402)
T 3awk_A 104 LDPRQDIAVLEVPKLAKEAAISAIKQWGQPKSKITHLVFATTSGVDMPGADFQLAKLLGLRPTVKRVMLYQ-QGAYAGAT 182 (402)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEECSCCCSSCHHHHHHHHHTCCTTCEEEEEES-CGGGHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEeCCCcCChHHHHHHHHcCCCCccceeeEEC-CccHHHHH
Confidence 11245566788999999999999999999999999999998766889999999999999986565 99999 79999999
Q ss_pred HHHHHHHHHhcCCCCEEEEEEECCCCCCCccCCC--ccccccccccccccEEEEEeccCCcc-cccceeEeeEEEEEecC
Q 011007 230 SIDLARDLLQVHPNSNAVVVSTEIITPNYYQGNE--RAMLLPNCLFRMGGAAILLSNRRRNR-SRAKYRLVHVVRTHKGA 306 (496)
Q Consensus 230 al~lA~~lL~~~~~~~aLVVs~E~~s~~~~~~~d--r~~l~~~~lfgDGAaA~lLs~~~~~~-~~~~~~L~~~~~t~~~~ 306 (496)
||.+|.+++++++.++||||++|.+|..++++.| +++..+..+|||||+|+||++.+... ..+.|++.+........
T Consensus 183 al~~A~~~i~sg~~~~vLvvg~E~~s~~~~~~~d~~~~~~~~~~lfGDGA~A~vl~~~~~~~~~~~~~~l~~~~~~~~p~ 262 (402)
T 3awk_A 183 VLRVAKDLAENNKGARVLVACSEVTAVTFRAPSETHLDGLVGSALFGDGAAALIVGSDPVPQEEKPLFEIHWAGEAVLPD 262 (402)
T ss_dssp HHHHHHHHHHTSTTCEEEEEEEECTTTTCCCCCTTCHHHHHHHHHBCCEEEEEEEESSCCTTTCCCCEEEEEEEEEECTT
T ss_pred HHHHHHHHHHcCCCCEEEEEEEeccchhhcCCCccCHHHhhccccccCceEEEEEecCCCccccCCceEEEeeeEEeeCC
Confidence 9999999999999999999999999975555544 33344678999999999999865421 11235655433222221
Q ss_pred CcccccceeecccCCCceeeeechhHHHHHHHHhhhhhhhcCCCccchhHHHHHHHHHHHHhhhcc-ccCCcccchhccc
Q 011007 307 DDKAYRCVFEEEDKEGKVGISLSKDLMAIAGEALKSNITTIGPLVLPASEQLLFLMTLIGRKIFNP-KWKPYIPDFKQAF 385 (496)
Q Consensus 307 d~~~~~~~~~~~d~~G~~g~~ls~d~~~v~g~~l~~~i~~~gp~vlp~~e~~~~~~~~~~~~v~~~-~~~~~~p~~~~di 385 (496)
.+.....-. .++| ..+.+++++++.+.+.+...+ +++++. .+. | .+|+
T Consensus 263 ~~~~~~~~~---~~~g-~~~~~~~~v~~~~~~~~~~~i----------------------~~~L~~~gl~----d-~~di 311 (402)
T 3awk_A 263 SDGAINGHL---REAG-LIFHLLKDVPGLISKNIDKVL----------------------AEPLEYVHFP----S-YNDM 311 (402)
T ss_dssp CTTSEEEEE---ETTE-EEEEECTTHHHHHHHHHHHHT----------------------HHHHHHTTCC----C-GGGE
T ss_pred CchhcceEE---ecCc-eEEEeCchHHHHHHHHHHHHH----------------------HHHHHhcCCC----C-ccce
Confidence 111111101 1112 345667788776554333322 223321 221 2 3677
Q ss_pred cEEEeccCCHHHHHHHHHHcCCChhhHhhhhhhhcccCCccCCchHHHHHHHHHhCCCCCC--------CEEEEEeechh
Q 011007 386 EHFCIHAGGRAVIDELQKNLQLSAEHVEASRMTLHRFGNTSSSSLWYEMSYIEEKGRMKKG--------DRVWQIAFGSG 457 (496)
Q Consensus 386 d~f~~H~~~~~v~~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~i~~G--------d~Vll~~fG~G 457 (496)
+|++||+|+++++.+++.||++++|+..+++++++||||||||+|+.|++++++|+ ++| |+|++++||+|
T Consensus 312 -~~v~Hq~~~~i~~~~~~~lgl~~ek~~~s~~~l~~~GNtssAsi~~~L~~~~~~g~-~~G~~~~g~g~d~vll~~fG~G 389 (402)
T 3awk_A 312 -FWAVHPGGPAILDQIEAKLGLSTDKMQASRDVLASYGNMSSASVLFVLDQIRKNSE-ELHLPTTGEGFEWGFVIGFGPG 389 (402)
T ss_dssp -EEEECCSCHHHHHHHHHHTTCCTTTTHHHHHHHHHHCBCGGGHHHHHHHHHHHHHH-HTTCSBTTTTCSEEEEEEEETT
T ss_pred -eEEECCCcHHHHHHHHHHcCCCHHHHHHHHHHHHHcCCchhhHHHHHHHHHHhhcc-ccCCCcCCCCcceEEEEEeccc
Confidence 89999999999999999999999999877788999999999999999999999988 888 99999999999
Q ss_pred HhhhheeeEee
Q 011007 458 FKCNSAVWKCN 468 (496)
Q Consensus 458 ~~~~sav~r~~ 468 (496)
++|++++||+.
T Consensus 390 ~t~~~~ll~~~ 400 (402)
T 3awk_A 390 LTVETLLLRSI 400 (402)
T ss_dssp TEEEEEEEEEC
T ss_pred ceeeeheeeec
Confidence 99999999987
No 16
>2p0u_A Stilbenecarboxylate synthase 2; polyketide synthase, PKS type transferase; 1.90A {Marchantia polymorpha}
Probab=100.00 E-value=4.2e-48 Score=407.11 Aligned_cols=349 Identities=18% Similarity=0.243 Sum_probs=264.9
Q ss_pred CCCceEEEEeeeecCCCCcccChHHHHHHHhhhhcC--CcchHHHHHHHHHHcCCCceeecCCCCc-CCC----------
Q 011007 84 KPRHVYLVDYACYKPPVTCRVPFATFMEHSRLILKN--NPKSVEFQMRILERSGLGEETCLPPAIH-YIP---------- 150 (496)
Q Consensus 84 ~~~~v~Iv~~~~y~P~~~~~v~~~~~~e~~~~~~~~--~~~~~~f~~~i~~~sGi~~r~~~~~~~~-~~~---------- 150 (496)
+..+++|+++|+|+|+ ++++|+++.+.+...... .++..++.+||.+++||++|+++.+++. ..+
T Consensus 31 ~~~~~~I~gig~~~P~--~~v~n~~l~~~~~~~~~~~~~~~~~~~~~~i~~~tGI~~R~~a~~~~~~~~~p~~~~~~~~~ 108 (413)
T 2p0u_A 31 AVGPATVLAMGKAVPA--NVFEQATYPDFFFNITNSNDKPALKAKFQRICDKSGIKKRHFYLDQKILESNPAMCTYMETS 108 (413)
T ss_dssp CSSCCEEEEEEEECCS--EEEEGGGHHHHHHHHTTCTTCHHHHHHHHHHHHTSSCSEEEESCCHHHHHTCGGGGSSSSSC
T ss_pred CCCCeEEEEEEeeCCC--CccCHHHHHHHHHHhccccchhhhHHHHHHHHHhcCcCceeEeeChhhhccCcccccccCCC
Confidence 4567999999999999 899999999876431110 1233446679999999999999865421 000
Q ss_pred CCCchHHHHHhHHHHHHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCCce-eeEecCCCcchHHH
Q 011007 151 PTPTMEAARGEAELVIFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSNIK-SFNLSGMGCSAGLI 229 (496)
Q Consensus 151 ~~~~~~~~~~ea~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~~~-~~dl~g~gCsg~l~ 229 (496)
....++.+.+.+.+|+.+|+++||+++|++|+|||.||++|+.++..|+.+.+|+++||+++.+. +++++ +||+|++.
T Consensus 109 ~~~r~~~~~~~~~~La~~Aa~~aL~~agl~~~dId~li~~t~~~~~~p~~a~~v~~~LGl~~~~~~~~~v~-~aCas~~~ 187 (413)
T 2p0u_A 109 LNCRQEIAVAQVPKLAKEASMNAIKEWGRPKSEITHIVMATTSGVNMPGAELATAKLLGLRPNVRRVMMYQ-QGAFAGAT 187 (413)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTSCGGGCCEEEEEESSCCCBSCHHHHHHHHHTCCTTCEEEEEES-CCTTHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHCCEEEEEecCCcccCcHHHHHHHHhCCCCCcceEeEEC-CccHHHHH
Confidence 11245566788999999999999999999999999999998766889999999999999986675 99999 69999999
Q ss_pred HHHHHHHHHhcCCCCEEEEEEECCCCCCCccCCCc--cccccccccccccEEEEEeccCCcc-cccceeEeeEEEEEecC
Q 011007 230 SIDLARDLLQVHPNSNAVVVSTEIITPNYYQGNER--AMLLPNCLFRMGGAAILLSNRRRNR-SRAKYRLVHVVRTHKGA 306 (496)
Q Consensus 230 al~lA~~lL~~~~~~~aLVVs~E~~s~~~~~~~dr--~~l~~~~lfgDGAaA~lLs~~~~~~-~~~~~~L~~~~~t~~~~ 306 (496)
||.+|.+++++++.++||||++|.+|..++.++|+ +...+..+|||||+|+||++.+... ..+.|++......+...
T Consensus 188 AL~~A~~~i~sg~~~~vLvvg~E~~s~~~~~~~d~~~~~~~~~~lfGDGA~A~vl~~~~~~~~~~~~~~l~~~~~~~~p~ 267 (413)
T 2p0u_A 188 VLRVAKDLAENNAGARVLAICSEVTAVTFRAPSETHIDGLVGSALFGDGAAAVIVGSDPRPGIERPIYEMHWAGEMVLPE 267 (413)
T ss_dssp HHHHHHHHHHHSTTCEEEEEEEECSTTTCCCCCTTCHHHHHHHHHBCCEEEEEEEESSCCTTTCCCSEEEEEEEEEECTT
T ss_pred HHHHHHHHHHhCCCCEEEEEEEhhcchhccCCCccChhhhcccceeecccEEEEEecCCCccccCCceEEEecccEEeCC
Confidence 99999999999999999999999999755555542 2233578999999999999865421 11235554433222221
Q ss_pred CcccccceeecccCCCceeeeechhHHHHHHHHhhhhhhhcCCCccchhHHHHHHHHHHHHhhhcc-ccCCcccchhccc
Q 011007 307 DDKAYRCVFEEEDKEGKVGISLSKDLMAIAGEALKSNITTIGPLVLPASEQLLFLMTLIGRKIFNP-KWKPYIPDFKQAF 385 (496)
Q Consensus 307 d~~~~~~~~~~~d~~G~~g~~ls~d~~~v~g~~l~~~i~~~gp~vlp~~e~~~~~~~~~~~~v~~~-~~~~~~p~~~~di 385 (496)
.+..+..-.. +.+..+.+++++++.+.+.+...+ +++++. .+. | .+|+
T Consensus 268 ~~~~~~~~~~----~~g~~~~~~~~v~~~~~~~~~~~i----------------------~~~L~~~gl~----d-~~di 316 (413)
T 2p0u_A 268 SDGAIDGHLT----EAGLVFHLLKDVPGLITKNIGGFL----------------------KDTKNLVGAS----S-WNEL 316 (413)
T ss_dssp CTTSSEEEEE----TTEEEEECCSCHHHHHHHHHHHHH----------------------HHHHHHTTCC----S-GGGS
T ss_pred ChhhcCceEe----cCceEEEeccHHHHHHHHHHHHHH----------------------HHHHHHcCCC----C-ccce
Confidence 1111111111 112345667777766544332222 223321 221 2 3678
Q ss_pred cEEEeccCCHHHHHHHHHHcCCChhhHhhhhhhhcccCCccCCchHHHHHHHHHhCCCCCC--------CEEEEEeechh
Q 011007 386 EHFCIHAGGRAVIDELQKNLQLSAEHVEASRMTLHRFGNTSSSSLWYEMSYIEEKGRMKKG--------DRVWQIAFGSG 457 (496)
Q Consensus 386 d~f~~H~~~~~v~~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~i~~G--------d~Vll~~fG~G 457 (496)
+|++||+|+++++.+++.||++++|+..|++++++||||||||+|+.|++++++|+ ++| |+|+++|||+|
T Consensus 317 -~~v~Hq~~~~i~~~~~~~Lgl~~ek~~~s~~~l~~~GNtssAsi~~~L~~~~~~g~-~~G~~~~g~~~d~vll~~fG~G 394 (413)
T 2p0u_A 317 -FWAVHPGGPAILDQVEAKLELEKGKFQASRDILSDYGNMSSASVLFVLDRVRERSL-ESNKSTFGEGSEWGFLIGFGPG 394 (413)
T ss_dssp -EEEECCSSHHHHHHHHHHTTCCGGGGHHHHHHHHHHCBCGGGHHHHHHHHHHHHHH-HTTCSBTTTTCSEEEEEEEETT
T ss_pred -EEEECCCCHHHHHHHHHHhCCCHHHHHHHHHHHHHcCcchhhHHHHHHHHHHHhcc-ccCCcccCCCcceEEEEEeCcc
Confidence 89999999999999999999999999877789999999999999999999999887 888 99999999999
Q ss_pred HhhhheeeEee
Q 011007 458 FKCNSAVWKCN 468 (496)
Q Consensus 458 ~~~~sav~r~~ 468 (496)
++|++++|||.
T Consensus 395 ~t~~~~ll~~~ 405 (413)
T 2p0u_A 395 LTVETLLLRAL 405 (413)
T ss_dssp TEEEEEEEEEC
T ss_pred ceeeeeeEEEe
Confidence 99999999996
No 17
>3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A
Probab=100.00 E-value=4.8e-48 Score=397.33 Aligned_cols=318 Identities=18% Similarity=0.203 Sum_probs=244.3
Q ss_pred CCceEEEEeeeecCCCCcccChHHHHHHHhhhh---cCCcchHHHHHHHHHHcCCCceeecCCCCcCCCCCCchHHHHHh
Q 011007 85 PRHVYLVDYACYKPPVTCRVPFATFMEHSRLIL---KNNPKSVEFQMRILERSGLGEETCLPPAIHYIPPTPTMEAARGE 161 (496)
Q Consensus 85 ~~~v~Iv~~~~y~P~~~~~v~~~~~~e~~~~~~---~~~~~~~~f~~~i~~~sGi~~r~~~~~~~~~~~~~~~~~~~~~e 161 (496)
.++++|.++|+|+|+ ++++|+++.+.++... ..+++ ||.+++||++|+++++++.
T Consensus 10 ~~~v~I~~~g~~lP~--~~v~n~~l~~~~~~~~~~~~~~~~------~i~~~tGi~~R~~~~~~~~-------------- 67 (345)
T 3s21_A 10 FQNVSIAGLAHIDAP--HTLTSKEINERLQPTYDRLGIKTD------VLGDVAGIHARRLWDQDVQ-------------- 67 (345)
T ss_dssp CSSEEEEEEEEEECS--EEEEHHHHHHHHHHHHHHHTCCCC------HHHHTTCCSEEEECSSCCC--------------
T ss_pred ecceEEEEEEEeCCC--cEEcHHHHHHHHhhcccccCCCHH------HHHHhhCceeEEECCCCCC--------------
Confidence 357999999999999 8999999998764211 12344 7999999999999877654
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEeecc-CCCCCCcHHHHHHHHcCCCCCceeeEecCCCcchHHHHHHHHHHHHhc
Q 011007 162 AELVIFSAMDSLLQKTGLKPKDIDILIVNCS-LFSPTPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLLQV 240 (496)
Q Consensus 162 a~~la~~Aa~~aL~~agi~p~dID~LI~~ss-~~~~~Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL~~ 240 (496)
+.+|+.+|++++|+++|++|+|||.||++|+ +++..|+.+.+|+++||+++++.+++++ .+|+|++.||.+|.+++++
T Consensus 68 ~~~La~~Aa~~al~~ag~~~~~Id~vi~~t~~~~~~~p~~a~~v~~~lGl~~~~~~~~v~-~aC~s~~~al~~A~~~i~~ 146 (345)
T 3s21_A 68 ASDAATQAARKALIDANIGIEKIGLLINTSVSRDYLEPSTASIVSGNLGVSDHCMTFDVA-NACLAFINGMDIAARMLER 146 (345)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCCEEEECCSCCSCSSSCHHHHHHHHHTCCTTCEEEECC-CGGGHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCChHHHHHHHHhCCCCCceEEeEC-CcCHHHHHHHHHHHHHHHC
Confidence 7899999999999999999999999999875 6888999999999999998789999999 5999999999999999999
Q ss_pred CCCCEEEEEEECCCCCCCccCC------Ccc------ccccccccccccEEEEEeccCCcccccceeEeeEEEEEecCCc
Q 011007 241 HPNSNAVVVSTEIITPNYYQGN------ERA------MLLPNCLFRMGGAAILLSNRRRNRSRAKYRLVHVVRTHKGADD 308 (496)
Q Consensus 241 ~~~~~aLVVs~E~~s~~~~~~~------dr~------~l~~~~lfgDGAaA~lLs~~~~~~~~~~~~L~~~~~t~~~~d~ 308 (496)
++.++||||++|.+|.. ++.. ++. ......+|||||+|+||++.+... ..+++.+ +...+++
T Consensus 147 g~~~~vLvvg~e~~s~~-~~~~~~~~~~~~~~~~~f~~~~~~~~~GdGA~A~vl~~~~~~~--~~~~i~~---~~~~~~~ 220 (345)
T 3s21_A 147 GEIDYALVVDGETANLV-YEKTLERMTSPDVTEEEFRNELAALTLGCGAAAMVMARSELVP--DAPRYKG---GVTRSAT 220 (345)
T ss_dssp TSCSEEEEEEEECCHHH-HHHHHHHHTCTTCCHHHHHHHHGGGGBCCEEEEEEEEEGGGST--TSCEEEE---EEEEECG
T ss_pred CCCCEEEEEEEcccchh-hccccccccCCccchhhhhhhccceeeccceeEEEEecCCCCC--CCcceee---eccccCc
Confidence 99999999999999862 2111 221 011357899999999999876431 1244433 3444555
Q ss_pred ccccceeecccCCCceeeee-chhHHHHHHHHhhhhhhhcCCCccchhHHHHHHHHHHHHhhhcc-ccCCcccchhcccc
Q 011007 309 KAYRCVFEEEDKEGKVGISL-SKDLMAIAGEALKSNITTIGPLVLPASEQLLFLMTLIGRKIFNP-KWKPYIPDFKQAFE 386 (496)
Q Consensus 309 ~~~~~~~~~~d~~G~~g~~l-s~d~~~v~g~~l~~~i~~~gp~vlp~~e~~~~~~~~~~~~v~~~-~~~~~~p~~~~did 386 (496)
+.++. +.... . ++.. .+++++..-+ .+....++++++ .++ .+|||
T Consensus 221 ~~~~~-~~~~~--~--~~~~~g~~v~~~~~~----------------------~~~~~i~~~l~~~gl~------~~did 267 (345)
T 3s21_A 221 EWNKL-CRGNL--D--RMVTDTRLLLIEGIK----------------------LAQKTFVAAKQVLGWA------VEELD 267 (345)
T ss_dssp GGTTC----------------CHHHHHHHHH----------------------HHHHHHHHHHHHHCCC------GGGCS
T ss_pred chhhh-ccccC--c--ceEEcHHHHHHHHHH----------------------HHHHHHHHHHHHcCCC------HHHCC
Confidence 44332 11110 0 0100 0111111000 000111233332 233 48999
Q ss_pred EEEeccCCHHHHHHHHHHcCCChhhHhhhhhhhcccCCccCCchHHHHHHHHHhCCCCCCCEEEEEeechhHhhhheeeE
Q 011007 387 HFCIHAGGRAVIDELQKNLQLSAEHVEASRMTLHRFGNTSSSSLWYEMSYIEEKGRMKKGDRVWQIAFGSGFKCNSAVWK 466 (496)
Q Consensus 387 ~f~~H~~~~~v~~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~i~~Gd~Vll~~fG~G~~~~sav~r 466 (496)
||++||+|+++++.+++.||+++||+ ..++++||||||||+|+.|++++++|++++||+|++++||+|++|++++||
T Consensus 268 ~~v~Hq~~~~i~~~~~~~lgl~~ek~---~~~l~~~GNt~sasi~~~L~~~~~~g~~~~Gd~vll~~~G~G~t~~~~~l~ 344 (345)
T 3s21_A 268 QFVIHQVSRPHTAAFVKSFGIDPAKV---MTIFGEHGNIGPASVPIVLSKLKELGRLKKGDRIALLGIGSGLNCSMAEVV 344 (345)
T ss_dssp EEEECCSCHHHHHHHHHHHTCCGGGB---CCCHHHHCBCGGGHHHHHHHHHHHHTCCCTTCEEEEEEEETTTEEEEEEEE
T ss_pred EEEeCCCCHHHHHHHHHHcCcCHHHc---eeeHhhcCchHHHHHHHHHHHHHHcCCCCCCCEEEEEEEChhhhheEEEEE
Confidence 99999999999999999999999998 579999999999999999999999999999999999999999999999999
Q ss_pred e
Q 011007 467 C 467 (496)
Q Consensus 467 ~ 467 (496)
|
T Consensus 345 w 345 (345)
T 3s21_A 345 W 345 (345)
T ss_dssp C
T ss_pred C
Confidence 7
No 18
>3a5r_A Benzalacetone synthase; chalcone synthase, type III polyketide synthase, transferase, acyltransferase; HET: HC4; 1.60A {Rheum palmatum} PDB: 3a5q_A* 3a5s_A
Probab=100.00 E-value=1.5e-47 Score=399.59 Aligned_cols=348 Identities=18% Similarity=0.253 Sum_probs=262.2
Q ss_pred ceEEEEeeeecCCCCcccChHHHHHHHhhhh--cCCcchHHHHHHHHHHcCCCceeecCCCCc-----------CCCCCC
Q 011007 87 HVYLVDYACYKPPVTCRVPFATFMEHSRLIL--KNNPKSVEFQMRILERSGLGEETCLPPAIH-----------YIPPTP 153 (496)
Q Consensus 87 ~v~Iv~~~~y~P~~~~~v~~~~~~e~~~~~~--~~~~~~~~f~~~i~~~sGi~~r~~~~~~~~-----------~~~~~~ 153 (496)
+++|+++|+|+|+ ++++|+++.+.+.... ...++..++.+||.+++||++|+++.+++. ......
T Consensus 12 ~~~I~gig~~~P~--~~v~n~~l~~~~~~~~~~~~~~~~~~~~~~i~~~tGI~~R~~~~~~~~~~~~p~~~~~~~~~~~~ 89 (387)
T 3a5r_A 12 LATVMAIGTANPP--NCYYQADFPDFYFRVTNSDHLINLKQKFKRLCENSRIEKRYLHVTEEILKENPNIAAYEATSLNV 89 (387)
T ss_dssp CEEEEEEEEECCS--CEEETTTHHHHHHHHTTCTTCHHHHHHHHHHHHTTTCCEEECSCCHHHHHHCHHHHSSSSSCHHH
T ss_pred CcEEEEeeecCCC--cccCHHHHHHHHHHhcccccchhhHHHHHHHHHhCCCCceEEecChhhhccCcccccccCCCHHH
Confidence 4899999999999 8999999998764211 011232446679999999999999765420 000112
Q ss_pred chHHHHHhHHHHHHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCCce-eeEecCCCcchHHHHHH
Q 011007 154 TMEAARGEAELVIFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSNIK-SFNLSGMGCSAGLISID 232 (496)
Q Consensus 154 ~~~~~~~ea~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~~~-~~dl~g~gCsg~l~al~ 232 (496)
.++.+.+.+.+|+.+|+++||+++|++|+|||.||++|+.++..|+.+.+|+++||+++.+. +++++ +||+|++.||.
T Consensus 90 r~~~~~~~~~~La~~Aa~~aL~~ag~~~~~Id~li~~t~~~~~~p~~a~~v~~~lGl~~~~~~~~~v~-~aC~s~~~al~ 168 (387)
T 3a5r_A 90 RHKMQVKGVAELGKEAALKAIKEWGQPKSKITHLIVCCLAGVDMPGADYQLTKLLDLDPSVKRFMFYH-LGCYAGGTVLR 168 (387)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSCCEESCHHHHHHHHTTCCTTCEEEEEES-CCTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCcHHHHHHHHcCcCCCcceeeeEc-cccHHHHHHHH
Confidence 45566778999999999999999999999999999998766788999999999999986564 99998 69999999999
Q ss_pred HHHHHHhcCCCCEEEEEEECCCCCCCccCCC--ccccccccccccccEEEEEeccCCcc-cccceeEeeEEEEEecCCcc
Q 011007 233 LARDLLQVHPNSNAVVVSTEIITPNYYQGNE--RAMLLPNCLFRMGGAAILLSNRRRNR-SRAKYRLVHVVRTHKGADDK 309 (496)
Q Consensus 233 lA~~lL~~~~~~~aLVVs~E~~s~~~~~~~d--r~~l~~~~lfgDGAaA~lLs~~~~~~-~~~~~~L~~~~~t~~~~d~~ 309 (496)
+|.+++++++.++||||++|.+|..+..+.| +....+..+|||||+|+||++.+... ..+.+++.+.........+.
T Consensus 169 ~A~~~i~~g~~~~vLvvg~e~~s~~~~~~~d~~~~~~~~~~lfGDGA~A~vl~~~~~~~~~~~~~~l~~~~~~~~p~~~~ 248 (387)
T 3a5r_A 169 LAKDIAENNKGARVLIVCSEMTTTCFRGPSETHLDSMIGQAILGDGAAAVIVGADPDLTVERPIFELVSTAQTIVPESHG 248 (387)
T ss_dssp HHHHHHHHSTTCEEEEEEEECCTTTCCCCCSSCCSSTTHHHHBCCEEEEEEEESSCCTTTCCCCEEEEEEEEEECTTCTT
T ss_pred HHHHHHHhCCCCEEEEEEEeccchhhcCCCccchhhccccceeccceeEEEEecCCCccccCCceEEEeeeEEEeCCChH
Confidence 9999999999999999999999875545443 33344678999999999999865421 11235655432222211111
Q ss_pred cccceeecccCCCceeeeechhHHHHHHHHhhhhhhhcCCCccchhHHHHHHHHHHHHhhhcc-ccCCcccchhccccEE
Q 011007 310 AYRCVFEEEDKEGKVGISLSKDLMAIAGEALKSNITTIGPLVLPASEQLLFLMTLIGRKIFNP-KWKPYIPDFKQAFEHF 388 (496)
Q Consensus 310 ~~~~~~~~~d~~G~~g~~ls~d~~~v~g~~l~~~i~~~gp~vlp~~e~~~~~~~~~~~~v~~~-~~~~~~p~~~~did~f 388 (496)
.+..-+. +.+..+.+++++++.+.+.+...+ ++++++ .+. | .+|| +|
T Consensus 249 ~~~~~~~----~~g~~~~~~~~v~~~~~~~~~~~i----------------------~~~L~~~gl~----d-~~di-~~ 296 (387)
T 3a5r_A 249 AIEGHLL----ESGLSFHLYKTVPTLISNNIKTCL----------------------SDAFTPLNIS----D-WNSL-FW 296 (387)
T ss_dssp SEEEEEE----TTEEEEEECTTHHHHHHHHHHHHH----------------------HHHHGGGTCC----C-GGGS-EE
T ss_pred hcCceEc----CCCeEEEecchHHHHHHHHHHHHH----------------------HHHHHhcCCC----C-hhhe-eE
Confidence 1111011 122345567777766544332221 233332 222 2 3678 89
Q ss_pred EeccCCHHHHHHHHHHcCCChhhHhhhhhhhcccCCccCCchHHHHHHHHHhCCCCCC--------CEEEEEeechhHhh
Q 011007 389 CIHAGGRAVIDELQKNLQLSAEHVEASRMTLHRFGNTSSSSLWYEMSYIEEKGRMKKG--------DRVWQIAFGSGFKC 460 (496)
Q Consensus 389 ~~H~~~~~v~~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~i~~G--------d~Vll~~fG~G~~~ 460 (496)
++||+|+++++.+++.||++++|+..|++++++||||||||+|+.|++++++|+ ++| |+|++++||+|++|
T Consensus 297 v~Hq~~~~i~~~~~~~lgl~~ek~~~s~~~l~~~GNtssAsi~~~L~~~~~~g~-~~G~~~~G~~~d~vll~~fG~G~t~ 375 (387)
T 3a5r_A 297 IAHPGGPAILDQVTAKVGLEKEKLKVTRQVLKDYGNMSSATVFFIMDEMRKKSL-ENGQATTGEGLEWGVLFGFGPGITV 375 (387)
T ss_dssp EECCSCHHHHHHHHHHHTCCGGGGHHHHHHHHHHCBCGGGHHHHHHHHHHHHHH-HTTCSBTTTTCSEEEEEEEETTTEE
T ss_pred EECCCCHHHHHHHHHHcCCChHHhHHHHHHHHhcCCcchhHHHHHHHHHHHhcc-ccCCCCCCCCcceEEEEEecCccee
Confidence 999999999999999999999999877788999999999999999999998887 777 99999999999999
Q ss_pred hheeeEeecc
Q 011007 461 NSAVWKCNKT 470 (496)
Q Consensus 461 ~sav~r~~~~ 470 (496)
++++|||...
T Consensus 376 ~~~ll~~~~~ 385 (387)
T 3a5r_A 376 ETVVLRSVPV 385 (387)
T ss_dssp EEEEEEECBC
T ss_pred eehhheeccc
Confidence 9999999843
No 19
>1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A
Probab=100.00 E-value=8.5e-48 Score=402.14 Aligned_cols=346 Identities=18% Similarity=0.238 Sum_probs=263.0
Q ss_pred eEEEEeeeecCCCCcccChHHHHHHHhhhhcCCcchHHHHHHHHHHcCCCceee-cCCCCcCC------CC--CCchHHH
Q 011007 88 VYLVDYACYKPPVTCRVPFATFMEHSRLILKNNPKSVEFQMRILERSGLGEETC-LPPAIHYI------PP--TPTMEAA 158 (496)
Q Consensus 88 v~Iv~~~~y~P~~~~~v~~~~~~e~~~~~~~~~~~~~~f~~~i~~~sGi~~r~~-~~~~~~~~------~~--~~~~~~~ 158 (496)
++|.++++|+|+ ++++|+++.+..+....++... ++.+||++++||++|++ +.+.+.+. |+ ...++.+
T Consensus 33 ~~I~~ig~~~P~--~~v~n~~l~~~~~~~~~~~~~~-~~~~~i~~~tGI~~R~~~a~~~~~~~~~~~~~p~~~~~r~~~~ 109 (393)
T 1ted_A 33 AVIEGLATGTPR--RVVNQSDAADRVAELFLDPGQR-ERIPRVYQKSRITTRRMAVDPLDAKFDVFRREPATIRDRMHLF 109 (393)
T ss_dssp EEEEEEEEECCS--CEEEHHHHHHHHHTC----CCT-THHHHHHHTSCCSEEECSSCTTSTTHHHHTTCSSCHHHHHHHH
T ss_pred cEEEEeeeeCCC--cccCHHHHHHHHHHhcccccHH-HHHHHHHHhCCcCcceeeecChHhcccccccCCCCHHHHHHHH
Confidence 899999999999 8999999998876422111111 35679999999999998 76532111 11 1245556
Q ss_pred HHhHHHHHHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCCceeeEe-cCCCcchHHHHHHHHHHH
Q 011007 159 RGEAELVIFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSNIKSFNL-SGMGCSAGLISIDLARDL 237 (496)
Q Consensus 159 ~~ea~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~~~~~dl-~g~gCsg~l~al~lA~~l 237 (496)
.+.+.+|+.+|++++|+++|++|+|||.||++|+..+..|+.+.+|+++||++..+.++++ + ++|++++.||.+|.++
T Consensus 110 ~~~~~~la~~Aa~~aL~~agl~~~~Id~vi~~t~~~~~~p~~a~~v~~~lGl~~~~~~~~v~~-~aCas~~~Al~~A~~~ 188 (393)
T 1ted_A 110 YEHAVPLAVDVSKRALAGLPYRAAEIGLLVLATSTGFIAPGVDVAIVKELGLSPSISRVVVNF-MGCAAAMNALGTATNY 188 (393)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCCGGGEEEEEEEESSCCCSSCHHHHHHHHHTCCTTCEEEEEES-CGGGHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEeCCCccChHHHHHHHHcCcCCCcceeEecc-chhHHHHHHHHHHHHH
Confidence 6789999999999999999999999999998876546789999999999999876889999 6 7999999999999999
Q ss_pred HhcCCCCEEEEEEECCCCCCCccCCCccccccccccccccEEEEEeccCCc-ccccce-eEeeEEEEEecCCccccccee
Q 011007 238 LQVHPNSNAVVVSTEIITPNYYQGNERAMLLPNCLFRMGGAAILLSNRRRN-RSRAKY-RLVHVVRTHKGADDKAYRCVF 315 (496)
Q Consensus 238 L~~~~~~~aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAaA~lLs~~~~~-~~~~~~-~L~~~~~t~~~~d~~~~~~~~ 315 (496)
|++++.++|||+++|.+|..+..+.||....+.++|||||+|+||++.+.. .+++.| ++.+.. +...+|+.......
T Consensus 189 i~~G~~~~vLv~g~e~~s~~~~~~~~r~~~~~~~lfGDGA~A~vL~~~~~~~~~~~~~~~i~~~~-~~~~~d~~~~~~~~ 267 (393)
T 1ted_A 189 VRAHPAMKALVVCIELCSVNAVFADDINDVVIHSLFGDGCAALVIGASQVQEKLEPGKVVVRSSF-SQLLDNTEDGIVLG 267 (393)
T ss_dssp HHHSTTCEEEEEEEEECGGGCCCCSSHHHHHHHHHBCEEEEEEEEEEECTTSCCCTTCEEEEEEE-EEECTTCTTSEEEE
T ss_pred HHcCCCCEEEEEEEEeccccCCCCCCHHHhhhhhhhcCccEEEEEecCCCccccCcceeeeeccc-eEEcCCchhhccce
Confidence 999999999999999998744333566654457899999999999986532 111222 333321 22234543322111
Q ss_pred ecccCCCceeeeechhHHHHHHHHhhhhhhhcCCCccchhHHHHHHHHHHHHhhhc-cccCCcccchhccccEEEeccCC
Q 011007 316 EEEDKEGKVGISLSKDLMAIAGEALKSNITTIGPLVLPASEQLLFLMTLIGRKIFN-PKWKPYIPDFKQAFEHFCIHAGG 394 (496)
Q Consensus 316 ~~~d~~G~~g~~ls~d~~~v~g~~l~~~i~~~gp~vlp~~e~~~~~~~~~~~~v~~-~~~~~~~p~~~~did~f~~H~~~ 394 (496)
.+ +.| ..+..+++++....+.+...+ +++++ ..++ .+|||+|++||+|
T Consensus 268 ~~--~~g-~~~~~g~~v~~~~~~~~~~~i----------------------~~aL~~agl~------~~dId~~~~H~~~ 316 (393)
T 1ted_A 268 VN--HNG-ITCELSENLPGYIFSGVAPVV----------------------TEMLWDNGLQ------ISDIDLWAIHPGG 316 (393)
T ss_dssp EE--TTE-EEEEECTTHHHHHHHHHHHHH----------------------HHHHHHTTCC------GGGCSCEEECCSC
T ss_pred ec--CCC-eEEecCchHHHHHHHHHHHHH----------------------HHHHHHcCCC------HhHCCEEEECCCc
Confidence 11 112 223345566655443322211 23333 2333 4899999999999
Q ss_pred HHHHHHHHHHcCCChhhHhhhhhhhcccCCccCCchHHHHHHHHHhCCC-CCCCEEEEEeechhHhhhheeeEeec
Q 011007 395 RAVIDELQKNLQLSAEHVEASRMTLHRFGNTSSSSLWYEMSYIEEKGRM-KKGDRVWQIAFGSGFKCNSAVWKCNK 469 (496)
Q Consensus 395 ~~v~~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~i-~~Gd~Vll~~fG~G~~~~sav~r~~~ 469 (496)
.++++.+++.||++++++..|+.++++||||+|+|+|+.|++++++|++ ++||+|++++||+|++|++++|||.+
T Consensus 317 ~~i~d~~~~~lgl~~~k~~~s~~~~~~~GNt~sAsi~~~L~~~~~~g~~~~~Gd~vll~~~G~G~t~~~~~l~~~~ 392 (393)
T 1ted_A 317 PKIIEQSVRSLGISAELAAQSWDVLARFGNMLSVSLIFVLETMVQQAESAKAISTGVAFAFGPGVTVEGMLFDIIR 392 (393)
T ss_dssp HHHHHHHHHHHTCCGGGGHHHHHHHHHHCBCTHHHHHHHHHHHHHSCSSSSSSEEEEEEEEETTTEEEEEEEEECC
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHhhCCchHhHHHHHHHHHHhcCccCCCCCeEEEEEeccchhhhhhheeecc
Confidence 9999999999999999998778899999999999999999999999999 59999999999999999999999986
No 20
>1xes_A Dihydropinosylvin synthase; native structure, transferase; HET: 3IO; 1.70A {Pinus sylvestris} PDB: 1xet_A* 1u0u_A
Probab=100.00 E-value=2.2e-47 Score=401.67 Aligned_cols=350 Identities=19% Similarity=0.265 Sum_probs=263.9
Q ss_pred cCCCceEEEEeeeecCCCCcccChHHHHHHHhhhhcC--CcchHHHHHHHHHHcCCCceeecCCCCc-CC----------
Q 011007 83 SKPRHVYLVDYACYKPPVTCRVPFATFMEHSRLILKN--NPKSVEFQMRILERSGLGEETCLPPAIH-YI---------- 149 (496)
Q Consensus 83 ~~~~~v~Iv~~~~y~P~~~~~v~~~~~~e~~~~~~~~--~~~~~~f~~~i~~~sGi~~r~~~~~~~~-~~---------- 149 (496)
+++.+++|+++|+|+|+ ++++|+++.+.+.....- .++..++.+||++++||++|+++.+++. ..
T Consensus 34 ~~~~~~~I~gig~~lP~--~~v~n~el~~~~~~~~~~~~~~~~~~~~~~i~~~tGI~~R~~a~~~~~~~~~p~~~~~~~~ 111 (413)
T 1xes_A 34 RADGFASILAIGTANPP--NAVDQSTYPDFYFRITGNEHNTELKDKFKRICERSAIKQRYMYLTEEILKKNPDVCAFVEV 111 (413)
T ss_dssp SCCSCEEEEEEEEECCS--CEEEGGGHHHHHHHHTTCTTCHHHHHHHHHHHHTSCCCEEECSCCHHHHHTCHHHHSSSSS
T ss_pred cCCCCeEEEEEeecCCC--CccCHHHHHHHHHHhccccchhhhHHHHHHHHhhcCcCceEEeeChhhhccCccccccccC
Confidence 56678999999999999 889999999877432110 1233446689999999999999765410 00
Q ss_pred C-CCCchHHHHHhHHHHHHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCCce-eeEecCCCcchH
Q 011007 150 P-PTPTMEAARGEAELVIFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSNIK-SFNLSGMGCSAG 227 (496)
Q Consensus 150 ~-~~~~~~~~~~ea~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~~~-~~dl~g~gCsg~ 227 (496)
| ....++.+.+.+.+|+.+|+++||+++|++|+|||.||++|+..+..|+.+.+|+++||++..+. +++++ +||+|+
T Consensus 112 ~~~~~r~~~~~~~~~~La~~Aa~~AL~~agl~~~~Id~li~~t~~~~~~p~~a~~v~~~lGl~~~~~~~~~v~-~aCas~ 190 (413)
T 1xes_A 112 PSLDARQAMLAMEVPRLAKEAAEKAIQEWGQSKSGITHLIFCSTTTPDLPGADFEVAKLLGLHPSVKRVGVFQ-HGCFAG 190 (413)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESCCCEESCHHHHHHHHHTCCTTCEEEEEES-CCTTHH
T ss_pred CCHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEeCCCccchHHHHHHHHcCcCCccchhceec-CccHHH
Confidence 1 11245566778999999999999999999999999999998766788999999999999986564 99999 699999
Q ss_pred HHHHHHHHHHHhcCCCCEEEEEEECCCCCCCccCCC--ccccccccccccccEEEEEeccCCcc-cccceeEeeEEEEEe
Q 011007 228 LISIDLARDLLQVHPNSNAVVVSTEIITPNYYQGNE--RAMLLPNCLFRMGGAAILLSNRRRNR-SRAKYRLVHVVRTHK 304 (496)
Q Consensus 228 l~al~lA~~lL~~~~~~~aLVVs~E~~s~~~~~~~d--r~~l~~~~lfgDGAaA~lLs~~~~~~-~~~~~~L~~~~~t~~ 304 (496)
+.||.+|.+++++++.++||||++|.+|..++.++| ++...+..+|||||+|+||++.+... ..+.+++........
T Consensus 191 ~~AL~~A~~~i~~G~~~~vLvvg~E~~s~~~~~~~d~~~~~~~~~~lfGDGA~A~vl~~~~~~~~~~~~~~l~~~~~~~~ 270 (413)
T 1xes_A 191 GTVLRMAKDLAENNRGARVLVICSETTAVTFRGPSETHLDSLVGQALFGDGASALIVGADPIPQVEKACFEIVWTAQTVV 270 (413)
T ss_dssp HHHHHHHHHHHHTSTTCCEEEEEEECTTTTCCCCCTTCHHHHHHHHHBCCEEEEEEEESSCCTTTSCCSEEEEEEEEEEC
T ss_pred HHHHHHHHHHHHcCCCCEEEEEEehhhhhhhcCCCccchhhcccceeEecccEEEEEecCCCccccCCceEEEeeeeEEc
Confidence 999999999999999999999999999875555543 22233578999999999999865421 112355544322222
Q ss_pred cCCcccccceeecccCCCceeeeechhHHHHHHHHhhhhhhhcCCCccchhHHHHHHHHHHHHhhhcc-ccCCcccchhc
Q 011007 305 GADDKAYRCVFEEEDKEGKVGISLSKDLMAIAGEALKSNITTIGPLVLPASEQLLFLMTLIGRKIFNP-KWKPYIPDFKQ 383 (496)
Q Consensus 305 ~~d~~~~~~~~~~~d~~G~~g~~ls~d~~~v~g~~l~~~i~~~gp~vlp~~e~~~~~~~~~~~~v~~~-~~~~~~p~~~~ 383 (496)
...+.....-. . +.+..+.+++++++.+.+.+...+ ++++++ .+. | .+
T Consensus 271 p~~~~~~~~~~-~---~~g~~~~~~~~v~~~~~~~~~~~i----------------------~~~L~~~gl~----d-~~ 319 (413)
T 1xes_A 271 PNSEGAIGGKV-R---EVGLTFQLKGAVPDLISANIENCM----------------------VEAFSQFKIS----D-WN 319 (413)
T ss_dssp TTCTTTEEEEE-E---TTEEEEEECTTHHHHHHHHHHHHH----------------------HHHHGGGTCC----C-GG
T ss_pred CCChhhcCcEE-e---cCceEEEecccHHHHHHHHHHHHH----------------------HHHHHhcCCC----C-cc
Confidence 11111111101 1 112345667777766544332221 233332 222 2 36
Q ss_pred cccEEEeccCCHHHHHHHHHHcCCChhhHhhhhhhhcccCCccCCchHHHHHHHHHhCCCCCC--------CEEEEEeec
Q 011007 384 AFEHFCIHAGGRAVIDELQKNLQLSAEHVEASRMTLHRFGNTSSSSLWYEMSYIEEKGRMKKG--------DRVWQIAFG 455 (496)
Q Consensus 384 did~f~~H~~~~~v~~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~i~~G--------d~Vll~~fG 455 (496)
|+ +|++||+|+++++.+++.||+++||+..|++++++||||||||+|+.|++++++|+ ++| |+|+++|||
T Consensus 320 di-~~v~Hq~~~~i~~~~~~~Lgl~~ek~~~s~~~l~~~GNtssAsi~~~L~~~~~~g~-~~G~~~~G~~~d~vll~~fG 397 (413)
T 1xes_A 320 KL-FWVVHPGGRAILDRVEAKLNLDPTKLIPTRHVMSEYGNMSSACVHFILDQTRKASL-QNGCSTTGEGLEMGVLFGFG 397 (413)
T ss_dssp GS-EEEECCSCHHHHHHHHHHTTCCTTTTHHHHHHHHHHCBCGGGHHHHHHHHHHHHHH-HTTCSBTTTTCSEEEEEEEE
T ss_pred ce-eEEECCCCHHHHHHHHHHcCCChHHhHHHHHHHHhcCcCchhhHHHHHHHHHHhcc-ccCCCCCCCCcceEEEEEec
Confidence 77 79999999999999999999999999877788999999999999999999998887 777 999999999
Q ss_pred hhHhhhheeeEee
Q 011007 456 SGFKCNSAVWKCN 468 (496)
Q Consensus 456 ~G~~~~sav~r~~ 468 (496)
+|++|++++||+.
T Consensus 398 ~G~t~~~~ll~~~ 410 (413)
T 1xes_A 398 PGLTIETVVLKSV 410 (413)
T ss_dssp TTTEEEEEEEEEC
T ss_pred CCcEEeEEEEEec
Confidence 9999999999987
No 21
>1ee0_A 2-pyrone synthase; polyketide synthase, thiolase fold, transferase; HET: CAA; 2.05A {Gerbera hybrid cultivar} SCOP: c.95.1.2 c.95.1.2 PDB: 1qlv_A
Probab=100.00 E-value=4.2e-47 Score=398.15 Aligned_cols=353 Identities=20% Similarity=0.282 Sum_probs=262.2
Q ss_pred CCceEEEEeeeecCCCCcccChHHHHHHHhhhhc--CCcchHHHHHHHHHHcCCCceeecCCCCc-------CCC----C
Q 011007 85 PRHVYLVDYACYKPPVTCRVPFATFMEHSRLILK--NNPKSVEFQMRILERSGLGEETCLPPAIH-------YIP----P 151 (496)
Q Consensus 85 ~~~v~Iv~~~~y~P~~~~~v~~~~~~e~~~~~~~--~~~~~~~f~~~i~~~sGi~~r~~~~~~~~-------~~~----~ 151 (496)
..+++|+++|+|+|+ ++++|+++.+.+..... ..++..++.+||++++||++|+++.+++. ..+ .
T Consensus 19 ~~~~~I~gig~~~P~--~~v~n~~l~~~~~~~~~~~~~~~~~~~~~~i~~~tGI~~R~~~~~~~~~~~~p~~~d~~~~~~ 96 (402)
T 1ee0_A 19 QGLATILAIGTATPP--NCVAQADYADYYFRVTKSEHMVDLKEKFKRICEKTAIKKRYLALTEDYLQENPTMCEFMAPSL 96 (402)
T ss_dssp -CCCEEEEEEEECCS--CEEEHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHTCCCEEECSCCHHHHHHSGGGGSTTSSCH
T ss_pred CCCcEEEEeeecCCC--cccCHHHHHHHHHHhhcccchhhhHHHHHHHHHhcCccceeEecCchhhccCcccccccCCCH
Confidence 346899999999999 89999999987643111 01122346678999999999998865420 000 1
Q ss_pred CCchHHHHHhHHHHHHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCCce-eeEecCCCcchHHHH
Q 011007 152 TPTMEAARGEAELVIFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSNIK-SFNLSGMGCSAGLIS 230 (496)
Q Consensus 152 ~~~~~~~~~ea~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~~~-~~dl~g~gCsg~l~a 230 (496)
...++.+.+.+.+|+.+|+++||+++|++|+|||.||++|+.++..|+.+.+|+++||+++.+. +++++ ++|+|++.|
T Consensus 97 ~~r~~~~~~~~~~La~~Aa~~aL~~agl~~~~Id~vi~~t~~~~~~p~~a~~v~~~lGl~~~~~~~~~v~-~aCss~~~a 175 (402)
T 1ee0_A 97 NARQDLVVTGVPMLGKEAAVKAIDEWGLPKSKITHLIFCTTAGVDMPGADYQLVKLLGLSPSVKRYMLYQ-QGAAAGGTV 175 (402)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCSCGGGCCEEEEECSSCCEESCHHHHHHHHHTCCTTCEEEEECS-CCTTHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCChHHHHHHHHcCcCCCcceeeEEC-chhHHHHHH
Confidence 1235556678999999999999999999999999999998766788999999999999986664 99998 799999999
Q ss_pred HHHHHHHHhcCCCCEEEEEEECCCCCCCccCCC--ccccccccccccccEEEEEeccCCcc-cccceeEeeEEEEEecCC
Q 011007 231 IDLARDLLQVHPNSNAVVVSTEIITPNYYQGNE--RAMLLPNCLFRMGGAAILLSNRRRNR-SRAKYRLVHVVRTHKGAD 307 (496)
Q Consensus 231 l~lA~~lL~~~~~~~aLVVs~E~~s~~~~~~~d--r~~l~~~~lfgDGAaA~lLs~~~~~~-~~~~~~L~~~~~t~~~~d 307 (496)
|.+|.+++++++.++||||++|.+|..+..+.| +....+..+|||||+|+||++.+... ..+.+++.+.........
T Consensus 176 l~~A~~~i~~g~~~~vLvvg~E~~s~~~~~~~d~~~~~~~~~~lfGDGA~A~vl~~~~~~~~~~~~~~l~~~~~~~~p~~ 255 (402)
T 1ee0_A 176 LRLAKDLAENNKGSRVLIVCSEITAILFHGPNENHLDSLVAQALFGDGAAALIVGSGPHLAVERPIFEIVSTDQTILPDT 255 (402)
T ss_dssp HHHHHHHHHHSTTCCEEEEEEECGGGGCCCCCTTCHHHHHHTTTBCCEEEEEEEESSCCTTTCCCCEEEEEEEEEECTTC
T ss_pred HHHHHHHHHcCCCCEEEEEEEeccchhhcCCcccchhhhccceeEecceEEEEEecCCCccccCCceEEEeeeeEEcCCc
Confidence 999999999999999999999998875545544 22334578999999999999865421 112356554332222111
Q ss_pred cccccceeecccCCCceeeeechhHHHHHHHHhhhhhhhcCCCccchhHHHHHHHHHHHHhhhccccCCcccchhccccE
Q 011007 308 DKAYRCVFEEEDKEGKVGISLSKDLMAIAGEALKSNITTIGPLVLPASEQLLFLMTLIGRKIFNPKWKPYIPDFKQAFEH 387 (496)
Q Consensus 308 ~~~~~~~~~~~d~~G~~g~~ls~d~~~v~g~~l~~~i~~~gp~vlp~~e~~~~~~~~~~~~v~~~~~~~~~p~~~~did~ 387 (496)
+..+..-+. +.+..+.+++++++.+.+.+...+ ++++++.- +.| .+|| +
T Consensus 256 ~~~~~~~~~----~~g~~~~~~~~v~~~~~~~~~~~i----------------------~~~L~~~g---l~d-~~di-~ 304 (402)
T 1ee0_A 256 EKAMKLHLR----EGGLTFQLHRDVPLMVAKNIENAA----------------------EKALSPLG---ITD-WNSV-F 304 (402)
T ss_dssp GGGEEEEEE----TTEECCEECTTHHHHHHHHHHHHH----------------------HHHHGGGT---CCC-GGGS-E
T ss_pred hHhcCceec----cCceEEEecchHHHHHHHHHHHHH----------------------HHHHHHcC---CCc-cccc-e
Confidence 111111011 112235556777765543322211 23333211 112 3678 8
Q ss_pred EEeccCCHHHHHHHHHHcCCChhhHhhhhhhhcccCCccCCchHHHHHHHHHhCCCCCC--------CEEEEEeechhHh
Q 011007 388 FCIHAGGRAVIDELQKNLQLSAEHVEASRMTLHRFGNTSSSSLWYEMSYIEEKGRMKKG--------DRVWQIAFGSGFK 459 (496)
Q Consensus 388 f~~H~~~~~v~~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~i~~G--------d~Vll~~fG~G~~ 459 (496)
|++||+|+++++.+++.||++++|+..|++++++||||||||+|+.|++++++|+ ++| |+|++++||+|++
T Consensus 305 ~v~Hq~~~~i~~~~~~~lgl~~ek~~~s~~~l~~~GNtssAsi~~~L~~~~~~g~-~~G~~~~G~~~d~vll~~fG~G~t 383 (402)
T 1ee0_A 305 WMVHPGGRAILDQVERKLNLKEDKLRASRHVLSEYGNLISACVLFIIDEVRKRSM-AEGKSTTGEGLDCGVLFGFGPGMT 383 (402)
T ss_dssp EEECCSSHHHHHHHHHHTTCCTTTTHHHHHHHHHHCBCGGGHHHHHHHHHHHHHH-HTTCSBTBTTBSEEEEEEEETTTE
T ss_pred EEECCCCHHHHHHHHHHcCCChHHhHHHHHHHHhcCCchhhHHHHHHHHHHHhcc-ccCCCCCCCCcceEEEEEecCCcE
Confidence 9999999999999999999999999877788999999999999999999998887 777 9999999999999
Q ss_pred hhheeeEeeccCC
Q 011007 460 CNSAVWKCNKTIK 472 (496)
Q Consensus 460 ~~sav~r~~~~~~ 472 (496)
|++++|||.....
T Consensus 384 ~~~~ll~~~~~~~ 396 (402)
T 1ee0_A 384 VETVVLRSVRVTA 396 (402)
T ss_dssp EEEEEEEECBCC-
T ss_pred EEEEEEEEecccc
Confidence 9999999975433
No 22
>3led_A 3-oxoacyl-acyl carrier protein synthase III; structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.45A {Rhodopseudomonas palustris}
Probab=100.00 E-value=4.3e-47 Score=396.57 Aligned_cols=340 Identities=14% Similarity=0.180 Sum_probs=245.8
Q ss_pred CCceEEEEeeeecCCCCcccChHHHHHHHhhhh-----------------cCCcchHHHHHHHHHHcCCCceeecCCCCc
Q 011007 85 PRHVYLVDYACYKPPVTCRVPFATFMEHSRLIL-----------------KNNPKSVEFQMRILERSGLGEETCLPPAIH 147 (496)
Q Consensus 85 ~~~v~Iv~~~~y~P~~~~~v~~~~~~e~~~~~~-----------------~~~~~~~~f~~~i~~~sGi~~r~~~~~~~~ 147 (496)
.++++|.++|+|+|+ ++|+|+++.+.++... ..-+.+ -+||.+++||++||++.+++.
T Consensus 22 ~~~~~I~gig~~~P~--~~v~n~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~e~I~~~tGI~~R~~a~~~~~ 96 (392)
T 3led_A 22 VRPAVIAATGLYTPP--DSVSNAELVEAFNTYVANFNAANKARIEAGEIEPLQPSS---SEFIEKASGIKSRYVVAKPGI 96 (392)
T ss_dssp CCCEEEEEEEEECCS--EEEEHHHHHHHHHHHHHHHHHHTHHHHHTTSSCCCCCCC---HHHHHHHHCCCEEEESCCGGG
T ss_pred cCceEEEEEEEeCCC--ceEcHHHHHHHHhhhhcccccccchhhhcccccccCCCc---HHHHHHccCCceEEEecCccc
Confidence 456999999999999 8999999988654210 011111 148999999999999876431
Q ss_pred CC-----C-CCCchHHHHHhHHHHHHHHHHHHHHHcCCCcCCcCEEEeecc-CCCCCCcHHHHHHHHcCCCCCceeeEec
Q 011007 148 YI-----P-PTPTMEAARGEAELVIFSAMDSLLQKTGLKPKDIDILIVNCS-LFSPTPSLSAMVINKYKLRSNIKSFNLS 220 (496)
Q Consensus 148 ~~-----~-~~~~~~~~~~ea~~la~~Aa~~aL~~agi~p~dID~LI~~ss-~~~~~Ps~a~~I~~~Lgl~~~~~~~dl~ 220 (496)
.. | ....+.+..+++.+|+.+|+++||+++|++|+|||.||++|+ +++..|+.+++|+++||++ +.+||++
T Consensus 97 ~~~~~~~~~~~~r~~~~~~~~~~La~~Aa~~AL~~agi~~~dId~vi~~t~t~~~~~p~~a~~v~~~LGl~--~~~~dv~ 174 (392)
T 3led_A 97 VDPDVMRPIIPERSNDELSILAEMAVTAAEQAIERWGKPRERIGAVLCACSNMQRAYPAMAIEVQNALGLG--GFAFDMN 174 (392)
T ss_dssp GCTTTCSCCCCCCCTTSCCHHHHHHHHHHHHHHHHHCSCGGGEEEEEEESSCCSCSBSCHHHHHHHHTTCC--SEEEEEE
T ss_pred ccccccccccccchhcccccHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCccHHHHHHHHHhCCC--CeEEEEC
Confidence 11 1 112233344458999999999999999999999999999875 6788999999999999994 7999999
Q ss_pred CCCcchHHHHHHHHHHHHhcCCCCEEEEEEECCCCCCCccCCCccccccccccccccEEEEEeccCCcccccceeEeeEE
Q 011007 221 GMGCSAGLISIDLARDLLQVHPNSNAVVVSTEIITPNYYQGNERAMLLPNCLFRMGGAAILLSNRRRNRSRAKYRLVHVV 300 (496)
Q Consensus 221 g~gCsg~l~al~lA~~lL~~~~~~~aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAaA~lLs~~~~~~~~~~~~L~~~~ 300 (496)
++|+|++.||.+|.+++++++.++||||++|.+|. +.++.||+ +..+|||||+|+||++++... ..+++..
T Consensus 175 -~aC~g~~~aL~~A~~~i~~g~~~~vLvvg~E~~S~-~~d~~dr~---t~~lFGDGA~A~vl~~~~~~~--~~~~i~~-- 245 (392)
T 3led_A 175 -VACSSATFGLKTAADFVGGGSVDAVLMVNPEICSG-HLNFRDRD---SHFIFGDVATAAIVERADDAQ--GGWSILG-- 245 (392)
T ss_dssp -CGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGGG-GCCTTCTT---TTTTBCEEEEEEEEEEGGGCC--SSEEEEE--
T ss_pred -CccHHHHHHHHHHHHHHHCCCCCEEEEEeehhcCC-cCCcCccc---CCcccccccEEEEEEecCCCC--CCCeEEE--
Confidence 79999999999999999999999999999999997 45667776 578999999999999876421 2355443
Q ss_pred EEEecCCcccccceeecccCCCceeeeechhHHHHHHHHhhhhhhhcCCCccchhHHHHHHHHH---HHHhhhcc-ccCC
Q 011007 301 RTHKGADDKAYRCVFEEEDKEGKVGISLSKDLMAIAGEALKSNITTIGPLVLPASEQLLFLMTL---IGRKIFNP-KWKP 376 (496)
Q Consensus 301 ~t~~~~d~~~~~~~~~~~d~~G~~g~~ls~d~~~v~g~~l~~~i~~~gp~vlp~~e~~~~~~~~---~~~~v~~~-~~~~ 376 (496)
+...+++.. .+..+. |.. .....+.+.. -...+...|+. -+++.... ..++++++ .+.
T Consensus 246 -~~~~s~~~~--~~~~~~---g~~-~~~~~~~~~~----~~~~~~~~g~~------v~~~a~~~~~~~i~~~L~~~gl~- 307 (392)
T 3led_A 246 -TKLKTQFSN--NIRNNA---GFL-NRAWPEGRDK----ADKLFVQQGRK------VFKEVVPLVSEMIIEHAREIGID- 307 (392)
T ss_dssp -EEEEECCCS--SEEBCC---SGG-GGGSGGGTTS----GGGSCEECHHH------HHHHHHHHHHHHHHHHHHHTTCC-
T ss_pred -EEEEEcccc--ccccCC---Ccc-cCCCcccccc----ccceEEechHH------HHHHHHHHHHHHHHHHHHHcCCC-
Confidence 344444321 111110 000 0000000000 00011111211 11111111 12334432 232
Q ss_pred cccchhccccEEEeccCCHHHHHHHHHHc-C--CChhhHhhhhhhhcccCCccCCchHHHHHHHHHhCCCCCCCEEEEEe
Q 011007 377 YIPDFKQAFEHFCIHAGGRAVIDELQKNL-Q--LSAEHVEASRMTLHRFGNTSSSSLWYEMSYIEEKGRMKKGDRVWQIA 453 (496)
Q Consensus 377 ~~p~~~~did~f~~H~~~~~v~~~i~~~L-g--l~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~i~~Gd~Vll~~ 453 (496)
.+|||+|++||+|+++++.++++| | ++.+++ +.++++||||||||+|+.|+++ .+++++||+|+++|
T Consensus 308 -----~~dId~~v~Hqan~~i~~~~~~~llgl~~~~~k~---~~~l~~~GNtssAsipl~L~~~--~~~~~~Gd~vll~g 377 (392)
T 3led_A 308 -----PHGLKRMWLHQANINMNEIIGRKVLGRDPTRDEN---VIILDDYANTSSAGSIIAFHKH--QDDMAQGDLGLICS 377 (392)
T ss_dssp -----GGGCSEEEECSSCHHHHHHHHHHHHTSCCCTTTB---CCCHHHHCBCGGGHHHHHHHHC--CTTCCTTCEEEEEE
T ss_pred -----HHHCcEEEEcCCCHHHHHHHHHHhcCCCCCHHHH---HHHHhhhCccHHHHHHHHHHHH--hCCCCCCCEEEEEE
Confidence 489999999999999999999996 6 567776 7899999999999999999986 68999999999999
Q ss_pred echhHhhhheeeEee
Q 011007 454 FGSGFKCNSAVWKCN 468 (496)
Q Consensus 454 fG~G~~~~sav~r~~ 468 (496)
||+|++|+++++||.
T Consensus 378 fG~G~t~~~~ll~~~ 392 (392)
T 3led_A 378 FGAGYSAGTVFVQKR 392 (392)
T ss_dssp EETTTEEEEEEEEEC
T ss_pred EChhhEeEEEEEEEC
Confidence 999999999999974
No 23
>2d3m_A Pentaketide chromone synthase; chalcone synthase, polyketide synthase, transferase; HET: COA; 1.60A {Aloe arborescens} PDB: 2d51_A 2d52_A*
Probab=100.00 E-value=1.1e-46 Score=395.55 Aligned_cols=353 Identities=18% Similarity=0.219 Sum_probs=262.2
Q ss_pred cCCCceEEEEeeeecCCCCcccChHHHHHHHhhhhcC--CcchHHHHHHHHHHcCCCceeecCCCCc-CCCC--------
Q 011007 83 SKPRHVYLVDYACYKPPVTCRVPFATFMEHSRLILKN--NPKSVEFQMRILERSGLGEETCLPPAIH-YIPP-------- 151 (496)
Q Consensus 83 ~~~~~v~Iv~~~~y~P~~~~~v~~~~~~e~~~~~~~~--~~~~~~f~~~i~~~sGi~~r~~~~~~~~-~~~~-------- 151 (496)
+...+++|+++|+|+|+ ++++|+++.+.+...... .++..++.+||++++||++|+++.+++. ..+|
T Consensus 25 ~~~~~~~I~~ig~~~P~--~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~tGI~~R~~a~~~~~~~~~p~~~~~~~~ 102 (406)
T 2d3m_A 25 KADGTATVMAIGTAHPP--HIFPQDTYADVYFRATNSEHKVELKKKFDHICKKTMIGKRYFNYDEEFLKKYPNITSYDEP 102 (406)
T ss_dssp SCSSCCEEEEEEEECCS--EEEEGGGHHHHHHHHTTCTTCHHHHHHHHHHHHHSCCCEEEESCCHHHHTTCTTTSSSSSS
T ss_pred cCCCCeEEEEEeecCCC--CccCHHHHHHHHHHhccccchhhHHHHHHHHHhccCCcceEEeeChhhhccCcccccccCC
Confidence 34457999999999999 899999999876431110 1222345678999999999999865420 0001
Q ss_pred --CCchHHHHHhHHHHHHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCCce-eeEecCCCcchHH
Q 011007 152 --TPTMEAARGEAELVIFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSNIK-SFNLSGMGCSAGL 228 (496)
Q Consensus 152 --~~~~~~~~~ea~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~~~-~~dl~g~gCsg~l 228 (496)
...++.+.+.+.+|+.+|+++||+++|++|+|||.||++|+.++..|+.+.+|+++||+++.+. +++++ +||+|++
T Consensus 103 ~~~~r~~~~~~~~~~La~~Aa~~aL~~ag~~~~~Id~vi~~t~~~~~~p~~a~~v~~~lGl~~~~~~~~~v~-~aC~s~~ 181 (406)
T 2d3m_A 103 SLNDRQDICVPGVPALGTEAAVKAIEEWGRPKSEITHLVFCTSCGVDMPSADFQCAKLLGLHANVNKYCIYM-QGAYAGG 181 (406)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSCCEESCHHHHHHHHHTCCTTCEEEEEES-CGGGHHH
T ss_pred ChHHHHHHHHHhHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCCHHHHHHHHcCcCCCcceeeeEc-CccHHHH
Confidence 1235556678999999999999999999999999999998766788999999999999986565 99999 6999999
Q ss_pred HHHHHHHHHHhcCCCCEEEEEEECCCCCCCccCCCc--cccccccccccccEEEEEeccCCcc-cccceeEeeEEEEEec
Q 011007 229 ISIDLARDLLQVHPNSNAVVVSTEIITPNYYQGNER--AMLLPNCLFRMGGAAILLSNRRRNR-SRAKYRLVHVVRTHKG 305 (496)
Q Consensus 229 ~al~lA~~lL~~~~~~~aLVVs~E~~s~~~~~~~dr--~~l~~~~lfgDGAaA~lLs~~~~~~-~~~~~~L~~~~~t~~~ 305 (496)
.||.+|.+++++++.++||||++|.+|..+++++|+ ....+..+|||||+|+||++.+... ..+.+++.+....+..
T Consensus 182 ~al~~A~~~i~~g~~~~vLvvg~E~~s~~~~~~~d~~~~~~~~~~lfGDGAaA~vL~~~~~~~~~~~~~~l~~~~~~~~p 261 (406)
T 2d3m_A 182 TVMRYAKDLAENNRGARVLVVCAELTIMMLRAPNETHLDNAIGISLFGDGAAALIIGSDPIIGVEKPMFEIVCTKQTVIP 261 (406)
T ss_dssp HHHHHHHHHHHTSTTCEEEEEEEECGGGTCCCCCSTTHHHHHHHTTBCCEEEEEEEESSCCTTTCCCCEEEEEEEEEECT
T ss_pred HHHHHHHHHHHcCCCCEEEEEEEEecchheeCCcccchhhhhccceeccceEEEEEecCCCCccCCCceEEEecccEEcC
Confidence 999999999999999999999999998755555542 2233578999999999999865421 1123565543332222
Q ss_pred CCcccccceeecccCCCceeeeechhHHHHHHHHhhhhhhhcCCCccchhHHHHHHHHHHHHhhhcc-ccCCcccchhcc
Q 011007 306 ADDKAYRCVFEEEDKEGKVGISLSKDLMAIAGEALKSNITTIGPLVLPASEQLLFLMTLIGRKIFNP-KWKPYIPDFKQA 384 (496)
Q Consensus 306 ~d~~~~~~~~~~~d~~G~~g~~ls~d~~~v~g~~l~~~i~~~gp~vlp~~e~~~~~~~~~~~~v~~~-~~~~~~p~~~~d 384 (496)
..+..+..-. . +.+..+.+++++++.+.+.+...+ +++++. .+..- .|+ +|
T Consensus 262 ~~~~~~~~~~-~---~~g~~~~~~~~v~~~~~~~~~~~i----------------------~~~L~~agl~~~-id~-~d 313 (406)
T 2d3m_A 262 NTEDVIHLHL-R---ETGMMFYLSKGSPMTISNNVEACL----------------------IDVFKSVGITPP-EDW-NS 313 (406)
T ss_dssp TCTTTEEEEE-E---TTEEEEEECTTHHHHHHHHHHHHH----------------------HHHHHTTTCCCC-SSG-GG
T ss_pred CCchhcceee-c---cCceEEEeCchHHHHHHHHHHHHH----------------------HHHHHhcCCCCC-CCc-cc
Confidence 1111111101 1 112234566777765543322211 333332 23321 111 34
Q ss_pred ccEEEeccCCHHHHHHHHHHcCCChhhHhhhhhhhcccCCccCCchHHHHHHHHHhCCCCCC--------CEEEEEeech
Q 011007 385 FEHFCIHAGGRAVIDELQKNLQLSAEHVEASRMTLHRFGNTSSSSLWYEMSYIEEKGRMKKG--------DRVWQIAFGS 456 (496)
Q Consensus 385 id~f~~H~~~~~v~~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~i~~G--------d~Vll~~fG~ 456 (496)
| +|++||+|+++++.+++.||++++|+..|++++++||||+|||+|+.|++++++|+ ++| |+|+++|||+
T Consensus 314 i-~~v~Hq~~~~i~~~~~~~lgl~~~k~~~s~~~l~~~GNt~sAsi~~~L~~~~~~g~-~~G~~~~g~~~d~vll~~fG~ 391 (406)
T 2d3m_A 314 L-FWIPHPGGRAILDQVEAKLKLRPEKFRAARTVLWDYGNMVSASVGYILDEMRRKSA-AKGLETYGEGLEWGVLLGFGP 391 (406)
T ss_dssp S-EEEECCSCHHHHHHHHHHTTCCTTTTHHHHHHHHHHCBCGGGHHHHHHHHHHHHHH-HTTCSBTTTTCSEEEEEEEET
T ss_pred e-EEEECCCCHHHHHHHHHHcCCCHHHHHHHHHHHHHcCCchhhHHHHHHHHHHHhcc-ccCCCccCCCcceEEEEEecc
Confidence 4 49999999999999999999999999877788999999999999999999999888 888 9999999999
Q ss_pred hHhhhheeeEee
Q 011007 457 GFKCNSAVWKCN 468 (496)
Q Consensus 457 G~~~~sav~r~~ 468 (496)
|++|++++||+.
T Consensus 392 G~t~~~~ll~~~ 403 (406)
T 2d3m_A 392 GITVETILLHSL 403 (406)
T ss_dssp TTEEEEEEEEEC
T ss_pred chhhhhHHhhhc
Confidence 999999999986
No 24
>1u0m_A Putative polyketide synthase; type III polyketide synthase, PKS, bacterial, thiolase fold, beta-alpha-beta-alpha fold, catalytic triad; HET: 15P; 2.22A {Streptomyces coelicolor} SCOP: c.95.1.2 c.95.1.2
Probab=100.00 E-value=2.1e-46 Score=390.26 Aligned_cols=341 Identities=21% Similarity=0.313 Sum_probs=262.0
Q ss_pred eEEEEeeeecCCCCcccChHHHHHHHhhhhcCCcchHHHHHHHHHHcCCCceeecCCC-CcCCCCC--CchHHHHHhHHH
Q 011007 88 VYLVDYACYKPPVTCRVPFATFMEHSRLILKNNPKSVEFQMRILERSGLGEETCLPPA-IHYIPPT--PTMEAARGEAEL 164 (496)
Q Consensus 88 v~Iv~~~~y~P~~~~~v~~~~~~e~~~~~~~~~~~~~~f~~~i~~~sGi~~r~~~~~~-~~~~~~~--~~~~~~~~ea~~ 164 (496)
++|+++++|+|+ ++++|+++.+.++... .+.++.++++||++++||++|+++.+. ....++. ..++.+.+.+.+
T Consensus 10 ~~I~gig~~~P~--~~v~~~~l~~~~~~~~-~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 86 (382)
T 1u0m_A 10 ATLCRPSVSVPE--HVITMEETLELARRRH-TDHPQLPLALRLIENTGVRTRHIVQPIEDTLEHPGFEDRNKVYEREAKS 86 (382)
T ss_dssp CEECCCEEECCS--EEEEHHHHHHHHHHHH-TTCTTHHHHHHHHHHTCCCEEEESSCHHHHTSCCCHHHHHHHHHHHHHH
T ss_pred eEEEEEEEeCCC--cccCHHHHHHHHHHhc-cChhhHHHHHHHHHhcCCCcceeecChhhhccCCChhHHHHHHHHHHHH
Confidence 799999999999 8999999999877543 222234567789999999999987542 1111221 245556677899
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCCceeeEe-cCCCcchHHHHHHHHHHHHhcCCC
Q 011007 165 VIFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSNIKSFNL-SGMGCSAGLISIDLARDLLQVHPN 243 (496)
Q Consensus 165 la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~~~~~dl-~g~gCsg~l~al~lA~~lL~~~~~ 243 (496)
|+.+|++++|+++|++|++||.||++|+.++..|+.+.+|+++||++.++.++++ + ++|++++.||.+|.++|++++.
T Consensus 87 la~~Aa~~aL~~agl~~~~id~vi~~t~~~~~~p~~a~~v~~~lGl~~~~~~~~v~~-~aCss~~~Al~~A~~~i~~g~~ 165 (382)
T 1u0m_A 87 RVPAVIQRALDDAELLATDIDVIIYVSCTGFMMPSLTAWLINEMGFDSTTRQIPIAQ-LGCAAGGAAINRAHDFCTAYPE 165 (382)
T ss_dssp HHHHHHHHHHHHHTCCGGGCSEEEEECSSSCCSSCHHHHHHHHTTCCTTCEEEEECS-CGGGHHHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHHHHHhCCCHHHCCEEEEEecCCCCCCcHHHHHHHHhCCCCCcceEEccC-CcCHHHHHHHHHHHHHHHcCCC
Confidence 9999999999999999999999999876557889999999999999867899999 6 7999999999999999999999
Q ss_pred CEEEEEEECCCCCCCccCCCcc--ccccccccccccEEEEEeccCCcccccceeEeeEEEEEecCCcccccceeecccCC
Q 011007 244 SNAVVVSTEIITPNYYQGNERA--MLLPNCLFRMGGAAILLSNRRRNRSRAKYRLVHVVRTHKGADDKAYRCVFEEEDKE 321 (496)
Q Consensus 244 ~~aLVVs~E~~s~~~~~~~dr~--~l~~~~lfgDGAaA~lLs~~~~~~~~~~~~L~~~~~t~~~~d~~~~~~~~~~~d~~ 321 (496)
++|||+++|.+|.. .++.|+. ..+..++|||||+|+||++.+.. ++++.... +....++.. .......+
T Consensus 166 ~~vLv~g~e~~s~~-~~~~d~~~~~~~~~~lfGDGA~A~vL~~~~~~----g~~i~~~~-~~~~~~~~~--~~~~~~~~- 236 (382)
T 1u0m_A 166 ANALIVACEFCSLC-YQPTDLGVGSLLCNGLFGDGIAAAVVRGRGGT----GVRLERNG-SYLIPKTED--WIMYDVKA- 236 (382)
T ss_dssp CEEEEEEEEEGGGG-CCTTCCSHHHHHHHHHBCEEEEEEEEETTTCS----EEEEEEEE-EEECSSCTT--TEEEEEET-
T ss_pred CEEEEEEEeccchh-cCcccCCHHHhhccchhcCCcEEEEEeccCCC----CcEEEEee-eEecCChHH--hcCceecC-
Confidence 99999999999863 3444433 33336899999999999976531 34554432 222333332 22222111
Q ss_pred CceeeeechhHHHHHHHHhhhhhhhcCCCccchhHHHHHHHHHHHHhhhcc-ccCCcccchhccccEEEeccCCHHHHHH
Q 011007 322 GKVGISLSKDLMAIAGEALKSNITTIGPLVLPASEQLLFLMTLIGRKIFNP-KWKPYIPDFKQAFEHFCIHAGGRAVIDE 400 (496)
Q Consensus 322 G~~g~~ls~d~~~v~g~~l~~~i~~~gp~vlp~~e~~~~~~~~~~~~v~~~-~~~~~~p~~~~did~f~~H~~~~~v~~~ 400 (496)
++..+.++++++...++.+. ..+++++. .+. .+|||+|++||+|.++++.
T Consensus 237 ~g~~~~~~~~v~~~~~~~~~-----------------------~i~~aL~~agl~------~~dId~v~~H~~~~~i~d~ 287 (382)
T 1u0m_A 237 TGFHFLLDKRVPATMEPLAP-----------------------ALKELAGEHGWD------ASDLDFYIVHAGGPRILDD 287 (382)
T ss_dssp TEEEEEECTTTGGGHHHHHH-----------------------HHHHHHHTTSCC------SSCCSCCEEECSHHHHHHH
T ss_pred CceEEEeCcHHHHHHHHHHH-----------------------HHHHHHHHcCCC------HHHCCEEEECCCCHHHHHH
Confidence 11223344444433222111 12334432 333 3899999999999999999
Q ss_pred HHHHcCCChhhHhhhhhhhcccCCccCCchHHHHHHHHHhCCCCCCCEEEEEeechhHhhhheeeEeecc
Q 011007 401 LQKNLQLSAEHVEASRMTLHRFGNTSSSSLWYEMSYIEEKGRMKKGDRVWQIAFGSGFKCNSAVWKCNKT 470 (496)
Q Consensus 401 i~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~i~~Gd~Vll~~fG~G~~~~sav~r~~~~ 470 (496)
+++.||++++++..|+.++++||||+|+|+|+.|++++++|++++||+|++++||+|++|++++|||..+
T Consensus 288 ~~~~lgl~~~k~~~s~~~~~~~Gnt~sAsi~~~L~~~~~~g~~~~Gd~vll~~~G~G~t~~~~vl~~~~~ 357 (382)
T 1u0m_A 288 LSTFLEVDPHAFRFSRATLTEYGNIASAVVLDALRRLFDEGGVEEGARGLLAGFGPGITAEMSLGCWQTA 357 (382)
T ss_dssp HHHHSCSCGGGGHHHHHHHHHTCBCTTHHHHHHHHHHHHSCCCCSSCCCEEEEEETTTEEEEEEEEEECC
T ss_pred HHHHcCCCHHHHHHHHHHHHHhCCchhhHHHHHHHHHHHhcCCCCCCEEEEEEEcccceeEEEEEEEeec
Confidence 9999999999998777899999999999999999999999999999999999999999999999999754
No 25
>3s3l_A CERJ; acyltransferase, FABH homologue, KS III homologue, dimethyl transfer, transferase; 2.00A {Streptomyces tendae} PDB: 3t5y_A* 3t6s_A* 3t8e_A 3t5y_B*
Probab=100.00 E-value=5.1e-45 Score=376.64 Aligned_cols=332 Identities=16% Similarity=0.195 Sum_probs=235.8
Q ss_pred CCceEEEEeeeecCCCCcccChHHHHHHHhhhhcCCcchHHHHHHHHHHcCCCceeecCCCCcCCCCCCchHHHHHhHHH
Q 011007 85 PRHVYLVDYACYKPPVTCRVPFATFMEHSRLILKNNPKSVEFQMRILERSGLGEETCLPPAIHYIPPTPTMEAARGEAEL 164 (496)
Q Consensus 85 ~~~v~Iv~~~~y~P~~~~~v~~~~~~e~~~~~~~~~~~~~~f~~~i~~~sGi~~r~~~~~~~~~~~~~~~~~~~~~ea~~ 164 (496)
-.+++|.++|+|+|+ ++++|+++.+. .+++ ++.+++||++|+++++++. ..+.+
T Consensus 3 ~~~v~I~g~g~ylP~--~~~~~~~~~~~------~~~~------~~~~~tGi~~r~~a~~~e~------------~~~~~ 56 (357)
T 3s3l_A 3 WENLFVSGVAAWLPP--LSTAQDAVMAG------LLDP------ARSKLRGIESVTVASDAEE------------DAPPR 56 (357)
T ss_dssp CSSCEEEEEEEECCC--EEEHHHHHHTT------SSCH------HHHHHHCCCEEECCCSSGG------------GSHHH
T ss_pred cCceEEEEEEEECCC--CCCHHHHHHhc------CCcH------HHHHHcCceEEEecCCCCC------------CCHHH
Confidence 357999999999999 67777654321 1222 2458999999999876530 02789
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEeeccC--CCCCCcHHHHHHHHcCCCCCceeeEecCCCcchHHHHHHHHHHHHhcCC
Q 011007 165 VIFSAMDSLLQKTGLKPKDIDILIVNCSL--FSPTPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLLQVHP 242 (496)
Q Consensus 165 la~~Aa~~aL~~agi~p~dID~LI~~ss~--~~~~Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL~~~~ 242 (496)
|+.+|++++|+++|++|+|||.||++|+. ....++.+.+|+++||++ ++.+||++ ++|+|++.||.+|.+++++++
T Consensus 57 La~~Aa~~aL~~ag~~~~dId~vi~~t~~~~~~d~~~~a~~v~~~lG~~-~~~~~~v~-~aC~~~~~al~~A~~~i~sg~ 134 (357)
T 3s3l_A 57 MAARAARAALGRGDVDPADVSLVLHSSLWFQGIDLWPAASYVAHEAVGR-HVPAFGLA-QRCNGGMGAIELAGAYLGSGI 134 (357)
T ss_dssp HHHHHHHHHHHHTTCCGGGEEEEEEECSSCCSSSSSCHHHHHHHHHTCS-SSCEEEEE-CGGGHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCcccccHHHHHHHHhCCC-CCcEEEEc-CccHHHHHHHHHHHHHHHcCC
Confidence 99999999999999999999999999752 112346799999999997 89999999 799999999999999999999
Q ss_pred CC--EEEEEEECCCCC-CCccCCCccccccccccccccEEEEEeccCCcccccceeEeeEEEEEecCCcccccceeeccc
Q 011007 243 NS--NAVVVSTEIITP-NYYQGNERAMLLPNCLFRMGGAAILLSNRRRNRSRAKYRLVHVVRTHKGADDKAYRCVFEEED 319 (496)
Q Consensus 243 ~~--~aLVVs~E~~s~-~~~~~~dr~~l~~~~lfgDGAaA~lLs~~~~~~~~~~~~L~~~~~t~~~~d~~~~~~~~~~~d 319 (496)
.+ +||||++|.+|. .+.+++++ +..+|||||+|+||++.+.. .+ +..+...++++.++ ++...+
T Consensus 135 ~~~~~vLvvg~e~~s~~~~~~~~~~----~~~lfGDGA~A~vl~~~~~~-----~~---i~~~~~~s~g~~~~-~~~~~~ 201 (357)
T 3s3l_A 135 GAGHAALLTTGDRFAGPRIDRWNSV----DVTMYGDGAAALVLSTRDGF-----AR---VLSTATGVDNSLEI-LARGDE 201 (357)
T ss_dssp SSSSEEEEEEEECCCTTTCCTTTSS----SSCCBCCEEEEEEEESSCCS-----EE---EEEEEEEECGGGGG-GGTTTC
T ss_pred CCCCEEEEEEEeccccccccccccc----CCcccccccEEEEEecCCCC-----Ce---EEEEEEEEccChhh-hcccCC
Confidence 88 999999999995 23234554 36799999999999987642 22 34456667776433 222111
Q ss_pred CCCceeeeechhHHHHHHHHhhhhhhhcCCCccchhHHHHHHHHHHHHhhhcc-ccCCcccchhccccEEEe-ccCCHHH
Q 011007 320 KEGKVGISLSKDLMAIAGEALKSNITTIGPLVLPASEQLLFLMTLIGRKIFNP-KWKPYIPDFKQAFEHFCI-HAGGRAV 397 (496)
Q Consensus 320 ~~G~~g~~ls~d~~~v~g~~l~~~i~~~gp~vlp~~e~~~~~~~~~~~~v~~~-~~~~~~p~~~~did~f~~-H~~~~~v 397 (496)
........ ........++ +......|+.+. +.+.....+....++++++ .++ .+|||+|++ ||+|+.
T Consensus 202 ~~~~~~~~-~~~~~~~~g~--~~~~~~~g~~~~-~~~~~~~~~~~~i~~~L~~~gl~------~~did~~v~~hq~~~~- 270 (357)
T 3s3l_A 202 PFAPHPVE-PSPVADLGTR--TVRGAELADLPD-LTHRYIDLLVAAKTQALEDAGTA------IEDIAHAVIPVSRRGT- 270 (357)
T ss_dssp CCCSSCCS-SCCCCCHHHH--HHHHHHHHCCTT-HHHHHHHHHHHHHHHHHHHTTCC------GGGCSEEECCSCCCCS-
T ss_pred CCCCCccC-cCCccccccc--hhhhhcccchhh-hHHHHHHHHHHHHHHHHHHcCCC------HHHCCEEEecCcChHH-
Confidence 00000000 0000011111 011111222221 0000000111112344432 232 489999995 999999
Q ss_pred HHHHHHHcCCChhhHhhhhhhhcccCCccCCchHHHHHHHHHhCCCCCCCEEEEEeechhHhhhheeeEeecc
Q 011007 398 IDELQKNLQLSAEHVEASRMTLHRFGNTSSSSLWYEMSYIEEKGRMKKGDRVWQIAFGSGFKCNSAVWKCNKT 470 (496)
Q Consensus 398 ~~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~i~~Gd~Vll~~fG~G~~~~sav~r~~~~ 470 (496)
++.++++||+++||+. .....+||||||||+|+.|+++.++|++++||+|++++||+|++|+++++||.+.
T Consensus 271 ~~~~~~~lgl~~ek~~--~~~~~~~GNt~aAsipl~L~~~~~~g~l~~Gd~vll~~fG~G~t~~a~ll~~~~~ 341 (357)
T 3s3l_A 271 GHELHDLLGLPDERTS--WAYGRTTGHVGAGDQYAGLAHLVENALVQPGDRVLLFGGGAGYTCTAAVVEILRM 341 (357)
T ss_dssp SCCHHHHHTSCGGGBT--HHHHHHHCBCTTCHHHHHHHHHHHTTCCCTTCEEEEECCBTTTEEEEEEEEECCC
T ss_pred HHHHHHHcCCCHHHhH--HHhccccccchHhHHHHHHHHHHHcCCCCCCCEEEEEEEchhhhheeeeEEeccC
Confidence 9999999999999984 3345789999999999999999999999999999999999999999999999873
No 26
>2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa}
Probab=100.00 E-value=1.5e-44 Score=368.75 Aligned_cols=319 Identities=16% Similarity=0.246 Sum_probs=244.8
Q ss_pred ceEEEEeeeecCCCCcccChHHHHHHHhhhhcCCcchHHHHHHHHHHcCCCceeecCCCCcCCCCCCchHHHHHhHHHHH
Q 011007 87 HVYLVDYACYKPPVTCRVPFATFMEHSRLILKNNPKSVEFQMRILERSGLGEETCLPPAIHYIPPTPTMEAARGEAELVI 166 (496)
Q Consensus 87 ~v~Iv~~~~y~P~~~~~v~~~~~~e~~~~~~~~~~~~~~f~~~i~~~sGi~~r~~~~~~~~~~~~~~~~~~~~~ea~~la 166 (496)
+++|+++++|+|+ ++++|+++.+..+. ++ +||.+++||++|+++++ + .+.+|+
T Consensus 5 ~~~I~g~g~~~P~--~~~~~~~~~~~~~~----~~------~~i~~~~Gi~~R~~~~~-~--------------~~~~la 57 (331)
T 2x3e_A 5 AAVVCGLGSYLPE--AVLSNDMLAAELDT----SD------AWISSRTGVRQRHIAGD-L--------------GSGDLA 57 (331)
T ss_dssp EEEEEEEEEECCS--CEEEHHHHHHHTTC----CH------HHHHHHHCCCEEECCTT-C--------------CHHHHH
T ss_pred eeEEEEEEEECCC--cEecHHHHHHHhCC----CH------HHHHHhhCceEEEecCC-C--------------CHHHHH
Confidence 6899999999999 89999999987653 33 37999999999999765 2 268999
Q ss_pred HHHHHHHHHHcCCCcCCcCEEEeecc-CCCCCCcHHHHHHHHcCCCCCceeeEecCCCcchHHHHHHHHHHHHhcCCCCE
Q 011007 167 FSAMDSLLQKTGLKPKDIDILIVNCS-LFSPTPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLLQVHPNSN 245 (496)
Q Consensus 167 ~~Aa~~aL~~agi~p~dID~LI~~ss-~~~~~Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL~~~~~~~ 245 (496)
.+|++++|+++|+ +|||.||++|+ +++..|+.+.+|+++||++ ++++++++ ++|++++.||.+|.++|++++.++
T Consensus 58 ~~Aa~~al~~ag~--~~id~vi~~t~~~~~~~p~~a~~v~~~lgl~-~~~~~~v~-~aCas~~~Al~~A~~~i~~g~~~~ 133 (331)
T 2x3e_A 58 LRAASAALASAGL--ERVDAVVLATSTGDFCCPATAPRVAARLGLV-GALAFDLS-AAATGFVYGLASVGSLISAGLADS 133 (331)
T ss_dssp HHHHHHHHHHHTC--SCCSEEEEECSSCSEEESCSHHHHHHHTTCT-TSEEEEEE-CGGGHHHHHHHHHHHHHHTTSCSE
T ss_pred HHHHHHHHHhCCc--ccCCEEEEEeCCCCCCCChHHHHHHHHhCCC-CCcEEEEc-CcChHHHHHHHHHHHHHHcCCCCE
Confidence 9999999999999 89999998865 5677899999999999998 58999998 699999999999999999999999
Q ss_pred EEEEEECCCCCCCccCCCccccccccccccccEEEEEeccCCcccccceeEeeEEEEEecCCcccccceeecccCCCcee
Q 011007 246 AVVVSTEIITPNYYQGNERAMLLPNCLFRMGGAAILLSNRRRNRSRAKYRLVHVVRTHKGADDKAYRCVFEEEDKEGKVG 325 (496)
Q Consensus 246 aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAaA~lLs~~~~~~~~~~~~L~~~~~t~~~~d~~~~~~~~~~~d~~G~~g 325 (496)
|||+++|.++. +.+++|+. +..+|||||+|+||++.+... ..++ ..+...+|++.++.+..+.+. ..
T Consensus 134 vLv~g~e~~s~-~~~~~d~~---~~~~~GdGA~A~vL~~~~~a~---~~~i---~~~~~~~dg~~~~~~~~p~~~---~~ 200 (331)
T 2x3e_A 134 ALLVGVDTFSH-TLDPADRS---TRALFGDGAGAVVLRAGDAEE---EGAL---LAFDLGSDGHQFDLLMTPAVS---RA 200 (331)
T ss_dssp EEEEEEECGGG-GSCTTCHH---HHHHBCCEEEEEEEEEECTTS---TTBE---EEEEEEECGGGTTSEEEECCC---HH
T ss_pred EEEEEeecccc-CCCccccc---cceeeccccEEEEEEecCCCC---CCce---EEEEEEEcCCCCCeEEecCCC---CC
Confidence 99999999886 34455665 467999999999999765211 1123 234455677666655554211 00
Q ss_pred eeechhHHHHHHHHhhhhhhhcCCCccchhHHHHHHHH---HHHHhhhcc-ccCCcccchhccccEEEeccCCHHHHHHH
Q 011007 326 ISLSKDLMAIAGEALKSNITTIGPLVLPASEQLLFLMT---LIGRKIFNP-KWKPYIPDFKQAFEHFCIHAGGRAVIDEL 401 (496)
Q Consensus 326 ~~ls~d~~~v~g~~l~~~i~~~gp~vlp~~e~~~~~~~---~~~~~v~~~-~~~~~~p~~~~did~f~~H~~~~~v~~~i 401 (496)
.|.-. .-...+...|+.+ +++... ...++.+++ .++ .+|||+|++||+|.++++.+
T Consensus 201 ------~p~~~--~~~~~~~~~g~~v------~~~~~~~~~~~i~~aL~~agl~------~~did~~~~H~~~~~~~d~~ 260 (331)
T 2x3e_A 201 ------ERSSG--QASNYFRMDGKAV------FGQAVTQMSDSVRRVLDRVGWQ------ASDLHHLVPHQANTRILAAV 260 (331)
T ss_dssp ------HHHHT--CCCCCCEECHHHH------HHHHHHHHHHHHHHHHHHHTCC------GGGCSEEEECCCCHHHHHHH
T ss_pred ------CCCcc--CcCceEEecCHHH------HHHHHHHHHHHHHHHHHHcCCC------HHHCCEEEEcCCCHHHHHHH
Confidence 01000 0000011111110 111111 111333332 233 48999999999999999999
Q ss_pred HHHcCCChhhHhhhhhhhcccCCccCCchHHHHHHHHHhCCCCCCCEEEEEeechhHhhhheeeEeeccCC
Q 011007 402 QKNLQLSAEHVEASRMTLHRFGNTSSSSLWYEMSYIEEKGRMKKGDRVWQIAFGSGFKCNSAVWKCNKTIK 472 (496)
Q Consensus 402 ~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~i~~Gd~Vll~~fG~G~~~~sav~r~~~~~~ 472 (496)
++.||++++++ ..++.+||||+|+|+++.|++++++|++++||+|++++||+|++|++++|||...++
T Consensus 261 ~~~lg~~~~~~---~~~~~~~Gnt~sAs~~~~L~~~~~~~~~~~G~~vll~~~G~G~~~~~~~l~~~~~~~ 328 (331)
T 2x3e_A 261 ADQLDLPVERV---VSNIAEVGNTVAASIPLALAHGLRQGILRDGGNMVLTGFGAGLTWGSVALRWPKIVP 328 (331)
T ss_dssp HHHHTCCGGGB---CCCHHHHCBCGGGHHHHHHHHHHHTTCSCTTCEEEEEEEETTTEEEEEEEECCCCCC
T ss_pred HHHcCCCHHHH---hhhHhhhCcHHHHHHHHHHHHHHHhCCCCCCCEEEEEEEeHHhhheeeEEEECCccc
Confidence 99999999998 467899999999999999999999999999999999999999999999999954444
No 27
>1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2
Probab=100.00 E-value=3.3e-44 Score=367.50 Aligned_cols=312 Identities=20% Similarity=0.261 Sum_probs=243.1
Q ss_pred CceEEEEeeeecCCCCcccChHHHHHHHhhhhcCCcchHHHHHHHHHHcCCCceeecCCCCcCCCCCCchHHHHHhHHHH
Q 011007 86 RHVYLVDYACYKPPVTCRVPFATFMEHSRLILKNNPKSVEFQMRILERSGLGEETCLPPAIHYIPPTPTMEAARGEAELV 165 (496)
Q Consensus 86 ~~v~Iv~~~~y~P~~~~~v~~~~~~e~~~~~~~~~~~~~~f~~~i~~~sGi~~r~~~~~~~~~~~~~~~~~~~~~ea~~l 165 (496)
++++|+++++|+|+ .+++++++.+..+. ++ +||.+++||++|+++.+++. +.+|
T Consensus 10 ~~~~I~gig~~~P~--~~~~~~~~~~~~~~----~~------~~i~~~~Gi~~R~~~~~~~~--------------~~~l 63 (339)
T 1mzj_A 10 RFSRVLGVGSYRPR--REVSNKEVCTWIDS----TE------EWIETRTGIRSRRIAEPDET--------------IQVM 63 (339)
T ss_dssp CEEEEEEEEEECCS--CEEEHHHHTTTSSC----CH------HHHHHHHCCSEEECCCTTCC--------------HHHH
T ss_pred CceEEEEEEEeCCC--ccccHHHHHHHhCC----CH------HHHHHhcCceEEEEeCCCCC--------------HHHH
Confidence 46999999999999 88999999876542 33 37899999999999876543 6899
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEeecc-CCCCCCcHHHHHHHHcCCCCCceeeEecCCCcchHHHHHHHHHHHHhcCCCC
Q 011007 166 IFSAMDSLLQKTGLKPKDIDILIVNCS-LFSPTPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLLQVHPNS 244 (496)
Q Consensus 166 a~~Aa~~aL~~agi~p~dID~LI~~ss-~~~~~Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL~~~~~~ 244 (496)
+.+|++++|+++|++|+|||.||++|+ +++..|+.+.+|+.+||++ ++++++++ ++|++++.||.+|.++|+++..+
T Consensus 64 a~~Aa~~al~~ag~~~~~id~vi~gt~~~~~~~p~~a~~v~~~lgl~-~~~~~~v~-~aCas~~~Al~~A~~~i~~G~~~ 141 (339)
T 1mzj_A 64 GVAASRRALEHAGVDPAEIDLVVVSTMTNFVHTPPLSVAIAHELGAD-NAGGFDLS-AACAGFCHALSIAADAVESGGSR 141 (339)
T ss_dssp HHHHHHHHHHHHTCCGGGCCEEEEECSCCCCCSSCHHHHHHHHHTCT-TCEEEEEE-CGGGHHHHHHHHHHHHHHHSSCS
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCChHHHHHHHHhCCC-CccEEEcc-ccchHHHHHHHHHHHHHHCCCCC
Confidence 999999999999999999999998865 5777899999999999998 58999999 69999999999999999999999
Q ss_pred EEEEEEECCCCCCCccCCCccccccccccccccEEEEEeccCCcccccceeEeeEEEEEecCCcccccceeec----ccC
Q 011007 245 NAVVVSTEIITPNYYQGNERAMLLPNCLFRMGGAAILLSNRRRNRSRAKYRLVHVVRTHKGADDKAYRCVFEE----EDK 320 (496)
Q Consensus 245 ~aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAaA~lLs~~~~~~~~~~~~L~~~~~t~~~~d~~~~~~~~~~----~d~ 320 (496)
+|||+++|.++. ..++.|+. +..+|||||+|+||++.+.. .+. .+...+|++.++.+..+ ...
T Consensus 142 ~vLv~g~e~~s~-~~~~~d~~---~~~~~GdGA~A~vL~~~~~~------~i~---~~~~~~~g~~~~~~~~~g~~p~~~ 208 (339)
T 1mzj_A 142 HVLVVATERMTD-VIDLADRS---LSFLFGDGAGAAVVGPSDVP------GIG---PVVRGIDGTGLGSLHMSSSWDQYV 208 (339)
T ss_dssp CEEEEEEEEGGG-GSCSSCTT---TTTTBCEEEEEEEEEEESSC------CBC---CCEEEECGGGGGGEEESCCHHHHT
T ss_pred EEEEEEEccccc-ccCccccc---cceEeccCceEEEEEecCCC------CeE---EEEEEEcCCCCCeEEecCCCCCcc
Confidence 999999999886 34445655 46799999999999976531 121 22334566666555432 100
Q ss_pred CC---cee-ee-echhHHHHHHHHhhhhhhhcCCCccchhHHHHHHHHHHHHhhhcc-ccCCcccchhccccEEEeccCC
Q 011007 321 EG---KVG-IS-LSKDLMAIAGEALKSNITTIGPLVLPASEQLLFLMTLIGRKIFNP-KWKPYIPDFKQAFEHFCIHAGG 394 (496)
Q Consensus 321 ~G---~~g-~~-ls~d~~~v~g~~l~~~i~~~gp~vlp~~e~~~~~~~~~~~~v~~~-~~~~~~p~~~~did~f~~H~~~ 394 (496)
+. ..+ +. ..+++++...+ ......++.+++ .+. .+|||+|++||.|
T Consensus 209 ~~~~~~~~~~~~~g~~v~~~~~~----------------------~~~~~i~~aL~~agl~------~~did~v~~H~~~ 260 (339)
T 1mzj_A 209 EDPSVGRPALVMDGKRVFRWAVA----------------------DVVPAAREALEVAGLT------VGDLVAFVPHQAN 260 (339)
T ss_dssp TCSSSCSCCEEECHHHHHHHHHH----------------------HHHHHHHHHHHTTTCC------GGGCSEEEECCSC
T ss_pred cccccccceEEeeCHHHHHHHHH----------------------HHHHHHHHHHHHcCCC------HHHCCEEEECCCC
Confidence 00 000 00 01111111100 000112334432 222 4899999999999
Q ss_pred HHHHHHHHHHcCCChh-hHhhhhhhhcccCCccCCchHHHHHHHHHhCCCCCCCEEEEEeechhHhhhheeeEeec
Q 011007 395 RAVIDELQKNLQLSAE-HVEASRMTLHRFGNTSSSSLWYEMSYIEEKGRMKKGDRVWQIAFGSGFKCNSAVWKCNK 469 (496)
Q Consensus 395 ~~v~~~i~~~Lgl~~e-~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~i~~Gd~Vll~~fG~G~~~~sav~r~~~ 469 (496)
.++++.+++.||++++ ++ ..++.+||||+|+|+++.|++++++|++++||+|++++||+|++|++++|||.+
T Consensus 261 ~~~~d~i~~~lg~~~~~~~---~~~~~~~Gn~~sAs~~~~L~~~~~~g~~~~G~~vll~~~G~G~t~~~~~l~~~~ 333 (339)
T 1mzj_A 261 LRIIDVLVDRLGVPEHVVV---SRDAEDTGNTSSASVALALDRLVRSGAVPGGGPALMIGFGAGLSYAGQALLLPD 333 (339)
T ss_dssp HHHHHHHHHHHTCCTTSEE---CCTHHHHCBCTTHHHHHHHHHHHHHTSSCTTCEEEEEEEETTTEEEEEEEECCC
T ss_pred HHHHHHHHHHhCCCcccee---eehhhhcCchHHHHHHHHHHHHHHcCCCCCCCEEEEEEEchhheeEEEEEEeCC
Confidence 9999999999999998 87 467899999999999999999999999999999999999999999999999953
No 28
>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A*
Probab=100.00 E-value=1.3e-43 Score=359.33 Aligned_cols=309 Identities=19% Similarity=0.296 Sum_probs=242.5
Q ss_pred ceEEEEeeeecCCCCcccChHHHHHHHhhhhcCCcchHHHHHHHHHHcCCCceeecCCCCcCCCCCCchHHHHHhHHHHH
Q 011007 87 HVYLVDYACYKPPVTCRVPFATFMEHSRLILKNNPKSVEFQMRILERSGLGEETCLPPAIHYIPPTPTMEAARGEAELVI 166 (496)
Q Consensus 87 ~v~Iv~~~~y~P~~~~~v~~~~~~e~~~~~~~~~~~~~~f~~~i~~~sGi~~r~~~~~~~~~~~~~~~~~~~~~ea~~la 166 (496)
+++|.++++|+|+ ++++++++.+..+. ++ +||.+++||++|+++++++. +.+|+
T Consensus 2 ~~~I~~~g~~~P~--~~~~~~~~~~~~~~----~~------~~i~~~~Gi~~r~~~~~~~~--------------~~~l~ 55 (317)
T 1hnj_A 2 YTKIIGTGSYLPE--QVRTNADLEKMVDT----SD------EWIVTRTGIRERHIAAPNET--------------VSTMG 55 (317)
T ss_dssp EEEEEEEEEECCS--EEEEHHHHHTTSSC----CH------HHHHHHHCCCEEEECCTTCC--------------HHHHH
T ss_pred CcEEEEEEEeCCC--ceecHHHHHHHhCC----CH------HHHHHHhCceEEEecCCCCC--------------HHHHH
Confidence 5899999999999 89999999876442 33 37899999999999866543 68999
Q ss_pred HHHHHHHHHHcCCCcCCcCEEEeecc-CCCCCCcHHHHHHHHcCCCCCceeeEecCCCcchHHHHHHHHHHHHhcCCCCE
Q 011007 167 FSAMDSLLQKTGLKPKDIDILIVNCS-LFSPTPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLLQVHPNSN 245 (496)
Q Consensus 167 ~~Aa~~aL~~agi~p~dID~LI~~ss-~~~~~Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL~~~~~~~ 245 (496)
.+|++++|+++|++|++||.||++++ +++..|+.+.+|+.+||++ +.++++++ ++|++++.||.+|.++|+++..++
T Consensus 56 ~~a~~~al~~ag~~~~~id~vi~g~~~~~~~~~~~a~~v~~~lgl~-~~~~~~v~-~aCas~~~al~~A~~~i~~g~~~~ 133 (317)
T 1hnj_A 56 FEAATRAIEMAGIEKDQIGLIVVATTSATHAFPSAACQIQSMLGIK-GCPAFDVA-AACAGFTYALSVADQYVKSGAVKY 133 (317)
T ss_dssp HHHHHHHHHHHTCCGGGCCEEEEECSCCSCSSSCHHHHHHHHHTCC-SSCEEEEC-CGGGHHHHHHHHHHHHHHTTSCSE
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCC-CCeEEeeC-cccHHHHHHHHHHHHHHHCCCCCE
Confidence 99999999999999999999998865 6777899999999999998 48999998 799999999999999999999999
Q ss_pred EEEEEECCCCCCCccCCCccccccccccccccEEEEEeccCCcccccceeEeeEEEEEecCCcccccceeecccCC--C-
Q 011007 246 AVVVSTEIITPNYYQGNERAMLLPNCLFRMGGAAILLSNRRRNRSRAKYRLVHVVRTHKGADDKAYRCVFEEEDKE--G- 322 (496)
Q Consensus 246 aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAaA~lLs~~~~~~~~~~~~L~~~~~t~~~~d~~~~~~~~~~~d~~--G- 322 (496)
|||+++|.++. ..++.||. +..+|||||+|+||++.+.. .+ .....++++..++.+..+.+.. .
T Consensus 134 vlv~g~e~~s~-~~~~~d~~---~~~~~GdGA~A~vL~~~~~~------~i---~~~~~~~~g~~~~~~~~~~~~~~~~~ 200 (317)
T 1hnj_A 134 ALVVGSDVLAR-TCDPTDRG---TIIIFGDGAGAAVLAASEEP------GI---ISTHLHADGSYGELLTLPNADRVNPE 200 (317)
T ss_dssp EEEEEEECHHH-HSCTTCHH---HHTTBCCEEEEEEEEEESSC------SE---EEEEEEECGGGGGGEECCCCCSSCTT
T ss_pred EEEEEechhcc-cCCchhcc---cceeeccccEEEEEEecCCC------ce---eeEEEEEcCCCCCeEEECCCCCCCCC
Confidence 99999999886 33445665 36799999999999986531 12 2233455666555555442100 0
Q ss_pred cee-ee-echhHHHHHHHHhhhhhhhcCCCccchhHHHHHHHHHHHHhhhcc-ccCCcccchhccccEEEeccCCHHHHH
Q 011007 323 KVG-IS-LSKDLMAIAGEALKSNITTIGPLVLPASEQLLFLMTLIGRKIFNP-KWKPYIPDFKQAFEHFCIHAGGRAVID 399 (496)
Q Consensus 323 ~~g-~~-ls~d~~~v~g~~l~~~i~~~gp~vlp~~e~~~~~~~~~~~~v~~~-~~~~~~p~~~~did~f~~H~~~~~v~~ 399 (496)
..+ +. ..+++++...+. .....++.++. .+. .+|||+|++||+|.++++
T Consensus 201 ~~~~~~~~g~~~~~~~~~~----------------------~~~~i~~aL~~agl~------~~did~v~~H~~~~~~~d 252 (317)
T 1hnj_A 201 NSIHLTMAGNEVFKVAVTE----------------------LAHIVDETLAANNLD------RSQLDWLVPHQANLRIIS 252 (317)
T ss_dssp SCCSCEECHHHHHHHHHHH----------------------HHHHHHHHHHHTTCC------GGGCCEEEECCSCHHHHH
T ss_pred CCceEEecCHHHHHHHHHH----------------------HHHHHHHHHHHcCCC------HHHCCEEEEcCCCHHHHH
Confidence 000 00 011222111100 00112333332 233 489999999999999999
Q ss_pred HHHHHcCCChhhHhhhhhhhcccCCccCCchHHHHHHHHHhCCCCCCCEEEEEeechhHhhhheeeEe
Q 011007 400 ELQKNLQLSAEHVEASRMTLHRFGNTSSSSLWYEMSYIEEKGRMKKGDRVWQIAFGSGFKCNSAVWKC 467 (496)
Q Consensus 400 ~i~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~i~~Gd~Vll~~fG~G~~~~sav~r~ 467 (496)
.+++.||++++++ ..++.+||||+++|+++.|++++++|++++||+|++++||+|++|++++|||
T Consensus 253 ~i~~~lg~~~~~~---~~~~~~~Gn~~~As~~~~L~~~~~~~~~~~G~~vll~~~G~G~t~~~~~l~~ 317 (317)
T 1hnj_A 253 ATAKKLGMSMDNV---VVTLDRHGNTSAASVPCALDEAVRDGRIKPGQLVLLEAFGGGFTWGSALVRF 317 (317)
T ss_dssp HHHHHTTCCGGGB---CCCHHHHCBCGGGHHHHHHHHHHHTTCSCTTCEEEEEEEETTTEEEEEEEEC
T ss_pred HHHHHcCCCHHHh---HhhHhhhCcHHHHHHHHHHHHHHHhCCCCCCCEEEEEEEchhheeEEEEEEC
Confidence 9999999999998 5789999999999999999999999999999999999999999999999986
No 29
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana}
Probab=100.00 E-value=7.9e-43 Score=402.55 Aligned_cols=350 Identities=19% Similarity=0.257 Sum_probs=255.7
Q ss_pred CCceEEEEeeeecCCCCcccChHHHHHHHhhhhcCCcch---HHHHHHHHHHcCCCceeecCCCCc---------CCCCC
Q 011007 85 PRHVYLVDYACYKPPVTCRVPFATFMEHSRLILKNNPKS---VEFQMRILERSGLGEETCLPPAIH---------YIPPT 152 (496)
Q Consensus 85 ~~~v~Iv~~~~y~P~~~~~v~~~~~~e~~~~~~~~~~~~---~~f~~~i~~~sGi~~r~~~~~~~~---------~~~~~ 152 (496)
..+++|.++|+|+|+ .+++|+++.+.+...+. ++.+ .+..+|+.+++||++|+++.+++. ..++.
T Consensus 601 ~~~~~I~g~g~~~P~--~~v~~~~~~~~~~~~~~-~~~~~~l~~~~~~i~~~sGI~~r~~~~~~~~~~~~~~~~~~~~~~ 677 (979)
T 3tsy_A 601 KGPATILAIGTATPD--HCVYQSDYADYYFKVTK-SEHMTALKKKFNRICDKSMIKKRYIHLTEEMLEEHPNIGAYMAPS 677 (979)
T ss_dssp CSCEEEEEEEEECCS--CEEEHHHHHHHHHHHTT-CTTCHHHHHHHHHHHHHTCCCEEECSCCHHHHHHCHHHHSSSSCC
T ss_pred cCCceeecccCCCCC--CccCHHHHHHHHHHhcc-ccchHHHHHHHHHHHHhcCcceeeEecChhhhhcCcccccccCCC
Confidence 457999999999999 89999999998532221 2222 122345889999999999877642 11121
Q ss_pred C--chHHHHHhHHHHHHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCC-ceeeEecCCCcchHHH
Q 011007 153 P--TMEAARGEAELVIFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSN-IKSFNLSGMGCSAGLI 229 (496)
Q Consensus 153 ~--~~~~~~~ea~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~-~~~~dl~g~gCsg~l~ 229 (496)
. .+....+++.+|+.+|+++||+++|++|+|||.||++|++++..|+.+++|+++||+++. +.++|++ +||+|++.
T Consensus 678 ~~~r~~~~~~~~~~la~~Aa~~AL~~agl~~~dId~ii~~t~~~~~~p~~a~~v~~~lGl~~~~~~~~~v~-~aCsg~~~ 756 (979)
T 3tsy_A 678 LNIRQEIITAEVPKLGKEAALKALKEWGQPKSKITHLVFCTTSGVEMPGADYKLANLLGLEPSVRRVMLYH-QGCYAGGT 756 (979)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSCCCSSCHHHHHHHHHTCCTTCEEEEEES-CCTTHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHCCEEEEEeeCCCCCCcHHHHHHHHcCCCcccEEEeeec-cccHhHHH
Confidence 1 233445568999999999999999999999999999999899999999999999999843 4699999 79999999
Q ss_pred HHHHHHHHHhcCCCCEEEEEEECCCCCCCccCCCc--cccccccccccccEEEEEeccCCcc-cccceeEeeEEEEEecC
Q 011007 230 SIDLARDLLQVHPNSNAVVVSTEIITPNYYQGNER--AMLLPNCLFRMGGAAILLSNRRRNR-SRAKYRLVHVVRTHKGA 306 (496)
Q Consensus 230 al~lA~~lL~~~~~~~aLVVs~E~~s~~~~~~~dr--~~l~~~~lfgDGAaA~lLs~~~~~~-~~~~~~L~~~~~t~~~~ 306 (496)
||.+|.+++++|+.++||||++|..+.++.....+ +.++.+++|||||+|+||++.+... ..+.+...+.......
T Consensus 757 Al~~A~~~i~sG~~~~vLvvg~e~~~~~~~~~~~~~~~~~~~~~lfGDGA~A~vL~~~~~~~~~~~~~~~~~~~~~~~~- 835 (979)
T 3tsy_A 757 VLRTAKDLAENNAGARVLVVCSEITVVTFRGPSEDALDSLVGQALFGDGSAAVIVGSDPDISIERPLFQLVSAAQTFIP- 835 (979)
T ss_dssp HHHHHHHHHHTSTTCEEEEEEEECTTTTCCCCCSSCHHHHHHHHHBCCEEEEEEEESSCCSSSCCCCEEEEEEEEEECT-
T ss_pred HHHHHHHHHHhCCCCEEEEEEEEecchheeCCCccCHHHHhhhhhccCceEEEEEecCCCccccCcceEEEeeeeEEec-
Confidence 99999999999999999999999988755433222 2234568999999999999865421 2233433322222211
Q ss_pred CcccccceeecccCCCceeeeechhHHHHHHHHhhhhhhhcCCCccchhHHHHHHHHHHHHhhhcc-ccCCcccchhccc
Q 011007 307 DDKAYRCVFEEEDKEGKVGISLSKDLMAIAGEALKSNITTIGPLVLPASEQLLFLMTLIGRKIFNP-KWKPYIPDFKQAF 385 (496)
Q Consensus 307 d~~~~~~~~~~~d~~G~~g~~ls~d~~~v~g~~l~~~i~~~gp~vlp~~e~~~~~~~~~~~~v~~~-~~~~~~p~~~~di 385 (496)
+. +.........+| ..+.+.++++....+.+. ...++.++. .+. .+||
T Consensus 836 ~~--~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~----------------------~~~~~al~~agl~------~~di 884 (979)
T 3tsy_A 836 NS--AGAIAGNLREVG-LTFHLWPNVPTLISENVE----------------------KCLTQAFDPLGIS------DWNS 884 (979)
T ss_dssp TC--TTSEEEEEETTE-EEEEECTTHHHHHHHHHH----------------------HHHHHHHGGGTCC------CGGG
T ss_pred Cc--hhheEEEEecCc-eEEEEchHHHHHHHHHHH----------------------HHHHHHHhhcCCC------Cccc
Confidence 11 111111111111 223334445443322111 112334432 233 3899
Q ss_pred cEEEeccCCHHHHHHHHHHcCCChhhHhhhhhhhcccCCccCCchHHHHHHHHHhCCCCCCCE---------EEEEeech
Q 011007 386 EHFCIHAGGRAVIDELQKNLQLSAEHVEASRMTLHRFGNTSSSSLWYEMSYIEEKGRMKKGDR---------VWQIAFGS 456 (496)
Q Consensus 386 d~f~~H~~~~~v~~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~i~~Gd~---------Vll~~fG~ 456 (496)
|+|++||+|+++++.++++||++++|+..+++++++||||||||+|+.|+++.++ +++||+ ++++|||+
T Consensus 885 d~~~~Hq~~~~i~~~~~~~lgl~~~k~~~~~~~l~~~GNtssasi~~~L~~~~~~--~~~G~~v~~g~~~~~~ll~~~G~ 962 (979)
T 3tsy_A 885 LFWIAHPGGPAILDAVEAKLNLDKKKLEATRHVLSEYGNMSSACVLFILDEMRKK--SLKGERATTGEGLDWGVLFGFGP 962 (979)
T ss_dssp SEEEECCSCHHHHHHHHHHHTCCTTTTHHHHHHHHHHCBCTTHHHHHHHHHHHHH--HHHTTCSBTTTTCSEEEEEEECG
T ss_pred ceEEECCCChHHHHHHHHHcCCChHHHHHHHHHHHHcCCcchhhHHHHHHHHHhh--hcccccccCCCCcceeEEEEeCC
Confidence 9999999999999999999999999998888889999999999999999998763 345554 49999999
Q ss_pred hHhhhheeeEeeccCC
Q 011007 457 GFKCNSAVWKCNKTIK 472 (496)
Q Consensus 457 G~~~~sav~r~~~~~~ 472 (496)
|++|++++||+.+.++
T Consensus 963 G~t~~~~~l~~~~~~~ 978 (979)
T 3tsy_A 963 GLTIETVVLHSIPMVT 978 (979)
T ss_dssp GGEEEEEEEECCBCCC
T ss_pred chHHHHHHHHhccccC
Confidence 9999999999988654
No 30
>1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A
Probab=100.00 E-value=2e-42 Score=349.71 Aligned_cols=307 Identities=18% Similarity=0.343 Sum_probs=244.4
Q ss_pred ceEEEEeeeecCCCCcccChHHHHHHHhhhhcCCcchHHHHHHHHHHcCCCceeecCCCCcCCCCCCchHHHHHhHHHHH
Q 011007 87 HVYLVDYACYKPPVTCRVPFATFMEHSRLILKNNPKSVEFQMRILERSGLGEETCLPPAIHYIPPTPTMEAARGEAELVI 166 (496)
Q Consensus 87 ~v~Iv~~~~y~P~~~~~v~~~~~~e~~~~~~~~~~~~~~f~~~i~~~sGi~~r~~~~~~~~~~~~~~~~~~~~~ea~~la 166 (496)
+++|.++++|+|+ .+++|+++.+..+. ++ +||.+++||++|++..+++. +.+|+
T Consensus 2 ~~~I~~~g~~~P~--~~~~~~~~~~~~~~----~~------~~i~~~~gi~~r~~~~~~~~--------------~~~l~ 55 (313)
T 1zow_A 2 NVGIKGFGAYAPE--KIIDNAYFEQFLDT----SD------EWISKMTGIKERHWADDDQD--------------TSDLA 55 (313)
T ss_dssp CEEEEEEEEECCS--CEEEGGGGGGTSSC----CH------HHHHHHHCCSEEECCCTTCC--------------HHHHH
T ss_pred ceEEEEEEEECCC--ccccHHHHHHhcCC----CH------HHHHHhhCceEEEecCCCCC--------------HHHHH
Confidence 4899999999999 88999998865442 33 37899999999998766553 68999
Q ss_pred HHHHHHHHHHcCCCcCCcCEEEeecc-CCCCCCcHHHHHHHHcCCCCCceeeEecCCCcchHHHHHHHHHHHHhcCCCCE
Q 011007 167 FSAMDSLLQKTGLKPKDIDILIVNCS-LFSPTPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLLQVHPNSN 245 (496)
Q Consensus 167 ~~Aa~~aL~~agi~p~dID~LI~~ss-~~~~~Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL~~~~~~~ 245 (496)
.+|++++|+++|++|+|||.||++|+ +++..|+.+.+|+.+||++ ++++++++ ++|++++.||.+|.++|+++..++
T Consensus 56 ~~a~~~al~~ag~~~~~id~vi~~~~~~~~~~~~~a~~v~~~lgl~-~~~~~~v~-~aCas~~~al~~A~~~i~~g~~~~ 133 (313)
T 1zow_A 56 YEASVKAIADAGIQPEDIDMIIVATATGDMPFPTVANMLQERLGTG-KVASMDQL-AACSGFMYSMITAKQYVQSGDYHN 133 (313)
T ss_dssp HHHHHHHHHHHTCCGGGCCEEEEECSSCSCSSSCHHHHHHHHHTCC-SCCEEEEE-CGGGHHHHHHHHHHHHHHTTSCSC
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCC-CCcEEEEC-CcCHHHHHHHHHHHHHHHCCCCCE
Confidence 99999999999999999999998865 5678899999999999998 58999998 799999999999999999999999
Q ss_pred EEEEEECCCCCCCccCCCccccccccccccccEEEEEeccCCcccccceeEeeEEEEEecCCcccccceeecccCCCcee
Q 011007 246 AVVVSTEIITPNYYQGNERAMLLPNCLFRMGGAAILLSNRRRNRSRAKYRLVHVVRTHKGADDKAYRCVFEEEDKEGKVG 325 (496)
Q Consensus 246 aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAaA~lLs~~~~~~~~~~~~L~~~~~t~~~~d~~~~~~~~~~~d~~G~~g 325 (496)
|||+++|.++. ..++.|+. ..++|||||+|+||++.+... ++ ..+...+++..++.+..+.. +. .
T Consensus 134 vLv~g~e~~s~-~~~~~d~~---~~~~~gdGa~A~vl~~~~~~~-----~i---~~~~~~~~g~~~~~~~~~~~-~~--~ 198 (313)
T 1zow_A 134 ILVVGADKLSK-ITDLTDRS---TAVLFGDGAGAVIIGEVSEGR-----GI---ISYEMGSDGTGGKHLYLDKD-TG--K 198 (313)
T ss_dssp EEEEEEEEGGG-TCCTTCHH---HHTTBCEEEEEEEEEECSTTC-----EE---EEEEEEECGGGGGGEEECTT-TC--C
T ss_pred EEEEEEccccc-ccCccccc---ceeeeccceEEEEEEecCCCC-----ce---eEEEEEEcCCCcCeEEecCC-CC--e
Confidence 99999999886 34455655 468999999999999876421 22 23344556666665555431 11 1
Q ss_pred eee-chhHHHHHHHHhhhhhhhcCCCccchhHHHHHHHHHHHHhhhcc-ccCCcccchhccccEEEeccCCHHHHHHHHH
Q 011007 326 ISL-SKDLMAIAGEALKSNITTIGPLVLPASEQLLFLMTLIGRKIFNP-KWKPYIPDFKQAFEHFCIHAGGRAVIDELQK 403 (496)
Q Consensus 326 ~~l-s~d~~~v~g~~l~~~i~~~gp~vlp~~e~~~~~~~~~~~~v~~~-~~~~~~p~~~~did~f~~H~~~~~v~~~i~~ 403 (496)
+.. .+++++...+.+ ....++.++. .+. ++|||+|++|+.|..+++.+++
T Consensus 199 ~~~~g~~~~~~~~~~~----------------------~~~i~~al~~agl~------~~did~~~~H~~~~~~~d~~~~ 250 (313)
T 1zow_A 199 LKMNGREVFKFAVRIM----------------------GDASTRVVEKANLT------SDDIDLFIPHQANIRIMESARE 250 (313)
T ss_dssp EEECHHHHHHHHHHHH----------------------HHHHHHHHHHTTCC------GGGCSEEEECCSCHHHHHHHHH
T ss_pred eEeccHHHHHHHHHHH----------------------HHHHHHHHHHcCCC------HHHCCEEEEcCCCHHHHHHHHH
Confidence 111 122222211110 0112334432 233 4899999999999999999999
Q ss_pred HcCCChhhHhhhhhhhcccCCccCCchHHHHHHHHHhCCCCCCCEEEEEeechhHhhhheeeEe
Q 011007 404 NLQLSAEHVEASRMTLHRFGNTSSSSLWYEMSYIEEKGRMKKGDRVWQIAFGSGFKCNSAVWKC 467 (496)
Q Consensus 404 ~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~i~~Gd~Vll~~fG~G~~~~sav~r~ 467 (496)
.||++++++ ..++.+||||+++|+++.|++++++|++++||++++++||+|++|++++|||
T Consensus 251 ~lg~~~~~~---~~~~~~~Gh~~~as~~~~L~~~~~~~~~~~g~~vl~~~~G~G~t~~~~~l~~ 311 (313)
T 1zow_A 251 RLGISKDKM---SVSVNKYGNTSAASIPLSIDQELKNGKLKDDDTIVLVGFGGGLTWGAMTIKW 311 (313)
T ss_dssp HHTCCGGGB---CCCHHHHCBCGGGHHHHHHHHHHHTTCCCTTCEEEEEEEETTTEEEEEEEEC
T ss_pred HhCCCHHHH---HHhHhhhCchHHHHHHHHHHHHHHcCCCCCCCEEEEEEEchhhhheEEEEEe
Confidence 999999998 4579999999999999999999999999999999999999999999999998
No 31
>3v4n_A HMG-COA synthase; hydroxymethylglutaryl-COA synthase, nitrosylation, transfera inhibitor complex; HET: BTB; 1.60A {Enterococcus faecalis} PDB: 3v4x_A* 1x9e_A 1ysl_B* 1ysl_A* 2hdb_A*
Probab=100.00 E-value=4.8e-43 Score=365.43 Aligned_cols=304 Identities=14% Similarity=0.184 Sum_probs=236.5
Q ss_pred CceEEEEeeeecCCCCcccChHHHHHHHhhhhcCCcchHHHHHHHHHHcCCCceeecCCCCcCCCCCCchHHHHHhHHHH
Q 011007 86 RHVYLVDYACYKPPVTCRVPFATFMEHSRLILKNNPKSVEFQMRILERSGLGEETCLPPAIHYIPPTPTMEAARGEAELV 165 (496)
Q Consensus 86 ~~v~Iv~~~~y~P~~~~~v~~~~~~e~~~~~~~~~~~~~~f~~~i~~~sGi~~r~~~~~~~~~~~~~~~~~~~~~ea~~l 165 (496)
.+++|.++++|+|+ ++++|+++.+..+. +++ |+.+++|+++|+++++++. +.+|
T Consensus 6 m~v~I~~~g~y~P~--~~v~~~~l~~~~g~----~~~------~~~~~~Gi~~r~~~~~~e~--------------~~~L 59 (388)
T 3v4n_A 6 MTIGIDKISFFVPP--YYIDMTALAEARNV----DPG------KFHIGIGQDQMAVNPISQD--------------IVTF 59 (388)
T ss_dssp CCEEEEEEEEECCS--EEEEHHHHHHHTTS----CTH------HHHTTTCCCEEECCCTTCC--------------HHHH
T ss_pred eeEEEEEEEEECCC--eEEcHHHHHHHhCC----CHH------HHHHHhCceEEEECCCCCC--------------HHHH
Confidence 47999999999999 99999999988663 444 6788899999999887764 7899
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEeec-cCCCCCCcHHHHHHHHcCCCCCceeeEecCCCcchHHHHHHHHHHHHhcCCCC
Q 011007 166 IFSAMDSLLQKTGLKPKDIDILIVNC-SLFSPTPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLLQVHPNS 244 (496)
Q Consensus 166 a~~Aa~~aL~~agi~p~dID~LI~~s-s~~~~~Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL~~~~~~ 244 (496)
+.+|++++|++++ |+|||.||++| ++++..|+.+.+|+++||+++++.++|++ ++|+|++.||.+|.+++++++.+
T Consensus 60 a~~Aa~~aL~~a~--~~~Id~li~~t~t~~~~~ps~a~~v~~~LGl~~~~~~~dv~-~aC~gg~~AL~~A~~~i~sg~~~ 136 (388)
T 3v4n_A 60 AANAAEAILTKED--KEAIDMVIVGTESSIDESKAAAVVLHRLMGIQPFARSFEIK-EAXYGATAGLQLAKNHVALHPDK 136 (388)
T ss_dssp HHHHHHTTCCHHH--HHHEEEEEEECSSCSBSSSCHHHHHHHHTTCCSSCEEEEEE-SGGGHHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHhCC--cccCCEEEEEeccCCCcCccHHHHHHHHcCCCCCceEeehh-hhhhHHHHHHHHHHHHHhcCCCC
Confidence 9999999999997 99999999986 46788999999999999999779999999 69999999999999999999999
Q ss_pred EEEEEEECCCCCCCccCCCccccccccccccccEEEEEeccCCcccccceeEeeEEEEEecCCcccccce--eecccCCC
Q 011007 245 NAVVVSTEIITPNYYQGNERAMLLPNCLFRMGGAAILLSNRRRNRSRAKYRLVHVVRTHKGADDKAYRCV--FEEEDKEG 322 (496)
Q Consensus 245 ~aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAaA~lLs~~~~~~~~~~~~L~~~~~t~~~~d~~~~~~~--~~~~d~~G 322 (496)
+||||++|+.+.. .++.+ ..+|||||+|+||++++.- +..+..+++...+.+ +.+.+. +
T Consensus 137 ~vLVvg~e~~s~~-~~~~~------~~lfGDGA~A~ll~~~~~i-----------l~~~~~~~~~~~~~~df~~p~~~-~ 197 (388)
T 3v4n_A 137 KVLVVAADIAKYG-LNSGG------EPTQGAGAVAMLVSSEPRI-----------LALKEDNVMLTQDIYDFWRPTGH-P 197 (388)
T ss_dssp EEEEEEEEEECCC-TTCTT------GGGCEEEEEEEEEEESCSS-----------EEECSCCEEEECCCCSEECBTTC-S
T ss_pred EEEEEEehhhccc-CCCCC------CCccccceeEEEeecCCCc-----------eEEeccccccchhccccccCCCC-C
Confidence 9999999999862 23333 3689999999999986531 111122222221211 233211 1
Q ss_pred ceeeeechhHHHHHHHHhhhhhhhcCCCccchhHHHHHHHHH---HHHhhhcc-ccCCcccchhccccEEEecc------
Q 011007 323 KVGISLSKDLMAIAGEALKSNITTIGPLVLPASEQLLFLMTL---IGRKIFNP-KWKPYIPDFKQAFEHFCIHA------ 392 (496)
Q Consensus 323 ~~g~~ls~d~~~v~g~~l~~~i~~~gp~vlp~~e~~~~~~~~---~~~~v~~~-~~~~~~p~~~~did~f~~H~------ 392 (496)
.. ....+..++ ++... ..++++++ .+. .+|||+|++||
T Consensus 198 ~~-~~~g~~~~~-------------------------~~~~~~~~~~~~~l~~~g~~------~~did~~v~Hqp~~k~~ 245 (388)
T 3v4n_A 198 YP-MVDGPLSNE-------------------------TYIQSFAQVWDEHKKRTGLD------FADYDALAFHIPYTKMG 245 (388)
T ss_dssp SC-EECHHHHHH-------------------------HHHHHHHHHHHHHHHHHCCC------GGGCSEEEECCSSHHHH
T ss_pred Cc-eeccHhHHH-------------------------HHHHHHHHHHHHHHHHhCCC------HHHCCEEEeCCCcchHH
Confidence 00 001111111 11111 11233322 222 48999999999
Q ss_pred --CCHHHH----HHHHHHcCCChhhHhhhhhhhcccCCccCCchHHHHHHHHHh-CCCCCCCEEEEEeechhHhhhheee
Q 011007 393 --GGRAVI----DELQKNLQLSAEHVEASRMTLHRFGNTSSSSLWYEMSYIEEK-GRMKKGDRVWQIAFGSGFKCNSAVW 465 (496)
Q Consensus 393 --~~~~v~----~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~-g~i~~Gd~Vll~~fG~G~~~~sav~ 465 (496)
++++++ +.+++.|+++.++. +.++++||||+|+|+++.|+.++++ |++++||+|++++||+|+++..+.+
T Consensus 246 ~ka~~ril~~~~~~~~~~l~~~~e~~---~~~~~~~GN~~sASi~l~L~~~l~~~g~~~~Gd~ill~s~GsG~~ae~~~~ 322 (388)
T 3v4n_A 246 KKALLAKISDQTEAEQERILARYEES---IIYSRRVGNLYTGSLYLGLISLLENATTLTAGNQIGLFSYGSGAVAEFFTG 322 (388)
T ss_dssp HHHHHHHSTTSCHHHHHHHHHHHHHH---TTTGGGTCCCGGGHHHHHHHHHHHHCSSCCTTCEEEEEEEETTTEEEEEEE
T ss_pred HHHHHHHHhcccHHHHHHhCCCHHHH---hhHHHhcCchHHHHHHHHHHHHHHhcCcCCCCCEEEEEEecCcceeEEEEE
Confidence 556677 78899999999987 7899999999999999999999998 9999999999999999999999999
Q ss_pred EeeccCC
Q 011007 466 KCNKTIK 472 (496)
Q Consensus 466 r~~~~~~ 472 (496)
++.....
T Consensus 323 ~v~~~~~ 329 (388)
T 3v4n_A 323 ELVAGYQ 329 (388)
T ss_dssp EECTTGG
T ss_pred EEccCHH
Confidence 9887654
No 32
>2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus}
Probab=100.00 E-value=1.8e-41 Score=341.84 Aligned_cols=306 Identities=18% Similarity=0.325 Sum_probs=242.4
Q ss_pred ceEEEEeeeecCCCCcccChHHHHHHHhhhhcCCcchHHHHHHHHHHcCCCceeecCCCCcCCCCCCchHHHHHhHHHHH
Q 011007 87 HVYLVDYACYKPPVTCRVPFATFMEHSRLILKNNPKSVEFQMRILERSGLGEETCLPPAIHYIPPTPTMEAARGEAELVI 166 (496)
Q Consensus 87 ~v~Iv~~~~y~P~~~~~v~~~~~~e~~~~~~~~~~~~~~f~~~i~~~sGi~~r~~~~~~~~~~~~~~~~~~~~~ea~~la 166 (496)
+++|.++++|+|+ .+++++++.+..+. ++ +|+.+++||++|++..+ + ...+|+
T Consensus 2 ~~~I~~~g~~~P~--~~~~~~~~~~~~~~----~~------~~i~~~~Gi~~r~~~~~-~--------------~~~~l~ 54 (309)
T 2ebd_A 2 GTKIIGTGVYLPK--NVLTNFDLEKIVDT----SD------EWITTRTGIKERRIAKE-E--------------TITYMA 54 (309)
T ss_dssp CEEEEEEEEECCS--EEEEHHHHHTTSSC----CH------HHHHHHHCCCEEEECSS-C--------------CHHHHH
T ss_pred ceEEEEEEEECCC--ceEcHHHHHHHcCC----CH------HHHHHHhCceeeeecCC-C--------------CHHHHH
Confidence 5899999999999 89999999876442 33 37889999999999755 2 267899
Q ss_pred HHHHHHHHHHcCCCcCCcCEEEeecc-CCCCCCcHHHHHHHHcCCCCCceeeEecCCCcchHHHHHHHHHHHHhcCCCCE
Q 011007 167 FSAMDSLLQKTGLKPKDIDILIVNCS-LFSPTPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLLQVHPNSN 245 (496)
Q Consensus 167 ~~Aa~~aL~~agi~p~dID~LI~~ss-~~~~~Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL~~~~~~~ 245 (496)
.+|++++|+++|++|+|||.||++++ +++..|+.+.+|+++||+++ +++++++ ++|++++.||..|.++|+++..++
T Consensus 55 ~~a~~~al~~ag~~~~~id~v~~~~~~~~~~~~~~a~~v~~~lgl~~-~~~~~v~-~~C~s~~~al~~A~~~i~~g~~~~ 132 (309)
T 2ebd_A 55 TQAAKEALREANLSPEELDLIILATLTPQKRFPSTACLVQAQLKAKG-VYAFDIS-AACSGFIYALDIADSFIKSGKAKN 132 (309)
T ss_dssp HHHHHHHHHHHTCCGGGCSEEEEECSSCSSSSSCHHHHHHHHHTCTT-CEEEEEE-CGGGHHHHHHHHHHHHHHTTSCSE
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCCC-ceEEecC-ccchHHHHHHHHHHHHHHCCCCCE
Confidence 99999999999999999999998865 56778999999999999984 8999999 699999999999999999999999
Q ss_pred EEEEEECCCCCCCccCCCccccccccccccccEEEEEeccCCcccccceeEeeEEEEEecCCcccccceeecccCCCcee
Q 011007 246 AVVVSTEIITPNYYQGNERAMLLPNCLFRMGGAAILLSNRRRNRSRAKYRLVHVVRTHKGADDKAYRCVFEEEDKEGKVG 325 (496)
Q Consensus 246 aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAaA~lLs~~~~~~~~~~~~L~~~~~t~~~~d~~~~~~~~~~~d~~G~~g 325 (496)
|||+++|.++. +.++.|+. ..++|||||+|+||++.+..+ .+ ......+|++.++.+..+.. +...
T Consensus 133 vlv~g~e~~s~-~~~~~~~~---~~~~~gdGaaA~vL~~~~~~~-----~i---~~~~~~~~g~~~~~~~~p~~--~~~~ 198 (309)
T 2ebd_A 133 VLVIGAEKLSE-AVDWEDRS---TCVLFGDGAGAVVVTRSEDKS-----DI---LATRMYAEGSLEELLHADNC--GYIR 198 (309)
T ss_dssp EEEEEEEEGGG-TCCTTCTT---TTTTBCEEEEEEEEEECSSSC-----EE---EEEEEEECGGGGGGEEECTT--CCEE
T ss_pred EEEEEeccccc-ccCccchh---hccccccccEEEEEEecCCCC-----ce---eEEEEEecCCccceeEeCCC--CeEE
Confidence 99999999886 33444554 468999999999999876421 22 33445567766555554411 1100
Q ss_pred eeechhHHHHHHHHhhhhhhhcCCCccchhHHHHHHHHHHHHhhhcc-ccCCcccchhccccEEEeccCCHHHHHHHHHH
Q 011007 326 ISLSKDLMAIAGEALKSNITTIGPLVLPASEQLLFLMTLIGRKIFNP-KWKPYIPDFKQAFEHFCIHAGGRAVIDELQKN 404 (496)
Q Consensus 326 ~~ls~d~~~v~g~~l~~~i~~~gp~vlp~~e~~~~~~~~~~~~v~~~-~~~~~~p~~~~did~f~~H~~~~~v~~~i~~~ 404 (496)
..++++++...+. .....++.++. .++ .+|||+|++|+.|..+++.+.+.
T Consensus 199 -~~g~~~~~~~~~~----------------------~~~~i~~al~~agl~------~~did~~~~H~~~~~~~~~~~~~ 249 (309)
T 2ebd_A 199 -MKGRELFKVAVRS----------------------MEEVCREVLEKAGVK------PEEVSLVIPHQANVRIINALAEK 249 (309)
T ss_dssp -ECHHHHHHHHHHH----------------------HHHHHHHHHHHHTCC------GGGCSEEEECCSCHHHHHHHHHH
T ss_pred -EccHHHHHHHHHH----------------------HHHHHHHHHHHcCCC------HHHCCEEEEcCCCHHHHHHHHHH
Confidence 0112222211100 01112333332 233 38999999999999999999999
Q ss_pred cCCChhhHhhhhhhhcccCCccCCchHHHHHHHHHhCCCCCCCEEEEEeechhHhhhheeeEe
Q 011007 405 LQLSAEHVEASRMTLHRFGNTSSSSLWYEMSYIEEKGRMKKGDRVWQIAFGSGFKCNSAVWKC 467 (496)
Q Consensus 405 Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~i~~Gd~Vll~~fG~G~~~~sav~r~ 467 (496)
||++++++ ..++.+||||+++|+++.|.+++++|++++||++++++||+|++|++++|||
T Consensus 250 lg~~~~~~---~~~~~~~Gh~~~As~~~~L~~~~~~g~~~~G~~~l~~~~G~G~~~~~~~l~~ 309 (309)
T 2ebd_A 250 LNIPKEKV---FVNIQKYGNTSAASIPIALHEAIKEGKVKRGDLILMTAMGGGLTWGAVLLRY 309 (309)
T ss_dssp TTCCGGGB---CCCHHHHCBCGGGHHHHHHHHHHHTTCCCTTCEEEEEEEETTTEEEEEEEEC
T ss_pred hCCCHHHh---hhhHhhhcchHHHHHHHHHHHHHHcCCCCCCCEEEEEEEchhhhhEEEEEEC
Confidence 99999998 4689999999999999999999999999999999999999999999999986
No 33
>1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A
Probab=100.00 E-value=5.4e-42 Score=349.75 Aligned_cols=309 Identities=24% Similarity=0.319 Sum_probs=239.9
Q ss_pred ceEEEEeeeecCCCCcccChHHHHHHHhhhhcCCcchHHHHHHHHHHcCCCceeecCCCCcCCCCCCchHHHHHhHHHHH
Q 011007 87 HVYLVDYACYKPPVTCRVPFATFMEHSRLILKNNPKSVEFQMRILERSGLGEETCLPPAIHYIPPTPTMEAARGEAELVI 166 (496)
Q Consensus 87 ~v~Iv~~~~y~P~~~~~v~~~~~~e~~~~~~~~~~~~~~f~~~i~~~sGi~~r~~~~~~~~~~~~~~~~~~~~~ea~~la 166 (496)
+++|+++++|+|+ .+++|+++.+..+. ++ +||.+++||++|++..+++. +.+|+
T Consensus 12 ~~~I~g~g~~~P~--~~~~~~~~~~~~~~----~~------~~i~~~~gi~~r~~~~~~~~--------------~~~la 65 (335)
T 1u6e_A 12 SVGLLSVGAYRPE--RVVTNDEICQHIDS----SD------EWIYTRTGIKTRRFAADDES--------------AASMA 65 (335)
T ss_dssp CEEEEEEEEECCS--EEEEHHHHTTSSSC----CH------HHHHHHHCCSEEEECCTTCC--------------HHHHH
T ss_pred ceEEEEEEEECCC--ceecHHHHHHHhCC----CH------HHHHHhcCCceEeecCCCCC--------------HHHHH
Confidence 5899999999999 89999999875442 33 37899999999999876543 68999
Q ss_pred HHHHHHHHHHcCCCcCCcCEEEeecc-CCCCCCcHHHHHHHHcCCCCCceeeEecCCCcchHHHHHHHHHHHHhcCCCCE
Q 011007 167 FSAMDSLLQKTGLKPKDIDILIVNCS-LFSPTPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLLQVHPNSN 245 (496)
Q Consensus 167 ~~Aa~~aL~~agi~p~dID~LI~~ss-~~~~~Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL~~~~~~~ 245 (496)
.+|++++|+++|++|+|||.||++|+ +++..|+.+.+|+++||++ ++++++++ ++|++++.||.+|.++|+++..++
T Consensus 66 ~~A~~~al~~ag~~~~~id~vi~~t~~~~~~~~~~a~~v~~~lgl~-~~~~~~v~-~aC~s~~~al~~A~~~i~~g~~~~ 143 (335)
T 1u6e_A 66 TEACRRALSNAGLSAADIDGVIVTTNTHFLQTPPAAPMVAASLGAK-GILGFDLS-AGAAGFGYALGAAADMIRGGGAAT 143 (335)
T ss_dssp HHHHHHHHHHHTCCGGGCCEEEEECSCCCCSSSCHHHHHHHHHTCT-TSEEEEEE-CGGGHHHHHHHHHHHHHHHTSCSS
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCChHHHHHHHHhCCC-CCcEeeec-cccHHHHHHHHHHHHHHHcCCCCE
Confidence 99999999999999999999999875 5688899999999999997 78999999 799999999999999999999999
Q ss_pred EEEEEECCCCCCCccCCCccccccccccccccEEEEEeccCCcccccceeEeeEEEEEecCCcccccceeeccc------
Q 011007 246 AVVVSTEIITPNYYQGNERAMLLPNCLFRMGGAAILLSNRRRNRSRAKYRLVHVVRTHKGADDKAYRCVFEEED------ 319 (496)
Q Consensus 246 aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAaA~lLs~~~~~~~~~~~~L~~~~~t~~~~d~~~~~~~~~~~d------ 319 (496)
|||+++|.++. +.++.|+. ..++|||||+|+||++.+.. + +. ....+++++.++.+..+.+
T Consensus 144 vLv~g~e~~s~-~~~~~d~~---~~~~~gDGA~A~vl~~~~~~----~--i~---~~~~~~~g~~~~~~~~~~~~~~~~~ 210 (335)
T 1u6e_A 144 MLVVGTEKLSP-TIDMYDRG---NCFIFADGAAAVVVGETPFQ----G--IG---PTVAGSDGEQADAIRQDIDWITFAQ 210 (335)
T ss_dssp EEEEEEEECGG-GCCTTCTT---TTTTBCEEEEEEEEEECSSC----C--BC---CCEEEECGGGGGGEEESSCHHHHHT
T ss_pred EEEEEEccccc-ccCccccc---cceEeccccEEEEEEecCCC----C--ee---EEEEEEcCCcccceeecCCccCcCC
Confidence 99999999986 34455665 46899999999999986531 1 11 1122344444444433211
Q ss_pred -CCCc-eeeee-chhHHHHHHHHhhhhhhhcCCCccchhHHHHHHHHHHHHhhhcc-ccCCcccchhccccEEEeccCCH
Q 011007 320 -KEGK-VGISL-SKDLMAIAGEALKSNITTIGPLVLPASEQLLFLMTLIGRKIFNP-KWKPYIPDFKQAFEHFCIHAGGR 395 (496)
Q Consensus 320 -~~G~-~g~~l-s~d~~~v~g~~l~~~i~~~gp~vlp~~e~~~~~~~~~~~~v~~~-~~~~~~p~~~~did~f~~H~~~~ 395 (496)
.++. ..+.. .++++....+ ......+++++. .+. .+|||+|++||.|.
T Consensus 211 ~~~~~~~~~~~~g~~~~~~~~~----------------------~~~~~i~~al~~agl~------~~dId~~~~H~~~~ 262 (335)
T 1u6e_A 211 NPSGPRPFVRLEGPAVFRWAAF----------------------KMGDVGRRAMDAAGVR------PDQIDVFVPHQANS 262 (335)
T ss_dssp STTSCCCCEEECHHHHHHHHHH----------------------HHHHHHHHHHHHHTCC------GGGCCEEEECCSCH
T ss_pred CccCccceEEEcCHHHHHHHHH----------------------HHHHHHHHHHHHcCCC------HHHCCEEEECCCCH
Confidence 0000 00111 1111111000 011112334432 233 48999999999999
Q ss_pred HHHHHHHHHcCCChh-hHhhhhhhhcccCCccCCchHHHHHHHHHhCCCCCCCEEEEEeechhHhhhheeeEe
Q 011007 396 AVIDELQKNLQLSAE-HVEASRMTLHRFGNTSSSSLWYEMSYIEEKGRMKKGDRVWQIAFGSGFKCNSAVWKC 467 (496)
Q Consensus 396 ~v~~~i~~~Lgl~~e-~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~i~~Gd~Vll~~fG~G~~~~sav~r~ 467 (496)
.+++.+.+.||++++ ++ ..++.+||||+|+|++++|+++.+++++++||++++.+||+|++|++++||+
T Consensus 263 ~~~~~~~~~lg~~~~~~~---~~~~~~~Gnt~sAs~~~~L~~~~~~~~~~~g~~~l~~~~G~G~t~~~~vl~~ 332 (335)
T 1u6e_A 263 RINELLVKNLQLRPDAVV---ANDIEHTGNTSAASIPLAMAELLTTGAAKPGDLALLIGYGAGLSYAAQVVRM 332 (335)
T ss_dssp HHHHHHHHHHTCCTTCEE---CCTHHHHCBCGGGHHHHHHHHHHHHTSSCTTCEEEEEEEETTTEEEEEEEEC
T ss_pred HHHHHHHHHcCCCchhhh---hhhhhhhCcHHHHHHHHHHHHHHHcCCCCCCCEEEEEEEehhheeEEEEEEe
Confidence 999999999999998 66 5678999999999999999999999999999999999999999999999998
No 34
>2p8u_A Hydroxymethylglutaryl-COA synthase, cytoplasmic; hydromethylglutaryl COA, mevalonate pathway, structural GENO structural genomics consortium, SGC; HET: COA; 2.00A {Homo sapiens}
Probab=100.00 E-value=6.8e-43 Score=373.19 Aligned_cols=325 Identities=14% Similarity=0.181 Sum_probs=238.3
Q ss_pred HHHhcCCCceEEEEeeeecCCCCcccChHHHHHHHhhhhcCCcchHHHHHHHHHHcCCCceeecCCCCcCCCCCCchHHH
Q 011007 79 VYFMSKPRHVYLVDYACYKPPVTCRVPFATFMEHSRLILKNNPKSVEFQMRILERSGLGEETCLPPAIHYIPPTPTMEAA 158 (496)
Q Consensus 79 ~~~~~~~~~v~Iv~~~~y~P~~~~~v~~~~~~e~~~~~~~~~~~~~~f~~~i~~~sGi~~r~~~~~~~~~~~~~~~~~~~ 158 (496)
.|++.|+.+++|.++++|+|+ ++|+++++.+..+. +++ |+..++||.+|+++++++.
T Consensus 16 ~~~~~~~~~vgI~aig~y~P~--~~v~~~el~~~~g~----~~~------~~~~~~Gi~~r~~~~~~e~----------- 72 (478)
T 2p8u_A 16 ENLYFQSMDVGIVALEIYFPS--QYVDQAELEKYDGV----DAG------KYTIGLGQAKMGFCTDRED----------- 72 (478)
T ss_dssp -CHHHHHHCCEEEEEEEECCS--EEEEHHHHHHHHTC----CTT------CCCCCCCCCEEECCCTTCC-----------
T ss_pred eehhcCCCceEEEEEEEECCC--eEecHHHHHHHhCC----Chh------HhecccCceEEEeCCCCCC-----------
Confidence 355556678999999999999 89999999988763 444 5778899999998876553
Q ss_pred HHhHHHHHHHHHHHHHHHcCCCcCCcCEEEeecc-CCCCCCcHHHHHHHHcCC--CCCceeeEecCCCcchHHHHHHHHH
Q 011007 159 RGEAELVIFSAMDSLLQKTGLKPKDIDILIVNCS-LFSPTPSLSAMVINKYKL--RSNIKSFNLSGMGCSAGLISIDLAR 235 (496)
Q Consensus 159 ~~ea~~la~~Aa~~aL~~agi~p~dID~LI~~ss-~~~~~Ps~a~~I~~~Lgl--~~~~~~~dl~g~gCsg~l~al~lA~ 235 (496)
+.+|+.+|+++||+++|++|+|||+||++|+ +++..|+.+++|++.|+. .+++.++|++ +||+||+.||++|.
T Consensus 73 ---~~~La~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~v~~~L~~lG~~~~~~~dv~-~aC~gg~~AL~~A~ 148 (478)
T 2p8u_A 73 ---INSLCMTVVQNLMERNNLSYDCIGRLEVGTETIIDKSKSVKTNLMQLFEESGNTDIEGIDTT-NACYGGTAAVFNAV 148 (478)
T ss_dssp ---HHHHHHHHHHHHHHHTTCCGGGEEEEEEECSCCSCSSSCHHHHHGGGTTTTTCCCCBCCEEE-SGGGHHHHHHHHHH
T ss_pred ---HHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCcccCccHHHHHHHHHhhcCCCCceEEEEc-chhHHHHHHHHHHH
Confidence 7899999999999999999999999999964 577899999999955543 2389999998 69999999999999
Q ss_pred HHHhcCC--CCEEEEEEECCCCCCCccCCCccccccccccccccEEEEEeccCCcccccceeEee-EEEEEecCCccccc
Q 011007 236 DLLQVHP--NSNAVVVSTEIITPNYYQGNERAMLLPNCLFRMGGAAILLSNRRRNRSRAKYRLVH-VVRTHKGADDKAYR 312 (496)
Q Consensus 236 ~lL~~~~--~~~aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAaA~lLs~~~~~~~~~~~~L~~-~~~t~~~~d~~~~~ 312 (496)
+++++++ .++||||++|+. .| .++. +..+|||||+|+||++++.. .+.. +..+++ .+ ..
T Consensus 149 ~~i~sg~~~~~~aLVV~~Eia--~~---~~~~---~~~~fGdGA~A~Ll~~~~~~------~l~~~~~gs~~-~~---~~ 210 (478)
T 2p8u_A 149 NWIESSSWDGRYALVVAGDIA--VY---ATGN---ARPTGGVGAVALLIGPNAPL------IFERGLRGTHM-QH---AY 210 (478)
T ss_dssp HHHTSTTCCSCEEEEEEEEEE--CC---CSST---TGGGCEEEEEEEEEESSCSE------EECTTCCEEEE-CC---CC
T ss_pred HHHHcCCccCCEEEEEEeeee--cc---cCCC---CCCcccceeEEEEEecCCCc------eEeeccceecc-cc---hh
Confidence 9999998 899999999963 23 3444 46799999999999976421 1100 000111 00 11
Q ss_pred ceeecccCCCceeeeechhHHHHHHHH-hhhhhhhcCCCccchhHHHHHHHHHHHHhhhcccc----CCcccchhccccE
Q 011007 313 CVFEEEDKEGKVGISLSKDLMAIAGEA-LKSNITTIGPLVLPASEQLLFLMTLIGRKIFNPKW----KPYIPDFKQAFEH 387 (496)
Q Consensus 313 ~~~~~~d~~G~~g~~ls~d~~~v~g~~-l~~~i~~~gp~vlp~~e~~~~~~~~~~~~v~~~~~----~~~~p~~~~did~ 387 (496)
.++.+..+... |.+.|.. ++..+ +.+......+ ++.++... .. .+...+|||+
T Consensus 211 d~~~p~~~~~~---------~~~dG~~s~~~y~-----------~a~~~~~~~~-~~~l~~~~~~~~~~-~g~~~~did~ 268 (478)
T 2p8u_A 211 DFYKPDMLSEY---------PIVDGKLSIQCYL-----------SALDRCYSVY-CKKIHAQWQKEGND-KDFTLNDFGF 268 (478)
T ss_dssp SEECCCTTCSS---------CEECHHHHHHHHH-----------HHHHHHHHHH-HHHHHHHHHHHTCC-CCCCGGGCSE
T ss_pred heeeecCCCcc---------eEEcCcchHHHHH-----------HHHHHHHHHH-HHHHhhhccccccc-cCCChHHcCE
Confidence 22333211100 0011110 00000 0000011111 11221000 00 1112489999
Q ss_pred EEeccCCHHHHHHHHHHcC------------------------CCh---------h-------------hHhhhhhhhcc
Q 011007 388 FCIHAGGRAVIDELQKNLQ------------------------LSA---------E-------------HVEASRMTLHR 421 (496)
Q Consensus 388 f~~H~~~~~v~~~i~~~Lg------------------------l~~---------e-------------~~~~S~~~l~r 421 (496)
||+||+|.++++.+.+.|+ +++ | ++++++.++++
T Consensus 269 ~v~H~~~~ki~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ek~~~~~~~~~~~~k~~~~~~~~~~ 348 (478)
T 2p8u_A 269 MIFHSPYCKLVQKSLARMLLNDFLNDQNRDKNSIYSGLEAFGDVKLEDTYFDRDVEKAFMKASSELFSQKTKASLLVSNQ 348 (478)
T ss_dssp EEECCSSHHHHHHHHHHHHHHHHHHCTTGGGSGGGTTCGGGTTCCGGGCTTCHHHHHHHHHHTHHHHHHHTTGGGHHHHH
T ss_pred EEecCCcHHHHHHHHHHhCcccccccccccccccccccchhccCChhhcccchhHHHHHHHHhHHHHHHhHHHHHHHHHh
Confidence 9999999999999999999 676 6 78888999999
Q ss_pred cCCccCCchHHHHHHHHHhCC--CCCCCEEEEEeechhHhhhheeeEeecc
Q 011007 422 FGNTSSSSLWYEMSYIEEKGR--MKKGDRVWQIAFGSGFKCNSAVWKCNKT 470 (496)
Q Consensus 422 ~GNtsSaSi~~~La~~~~~g~--i~~Gd~Vll~~fG~G~~~~sav~r~~~~ 470 (496)
||||+|+|+|+.|+.++++++ +++||+|+++|||+|++|+++++++...
T Consensus 349 ~GN~~saSi~l~L~~ll~~~~~~~~~Gdrill~s~GsG~~~~~~~l~~~~~ 399 (478)
T 2p8u_A 349 NGNMYTSSVYGSLASVLAQYSPQQLAGKRIGVFSYGSGLAATLYSLKVTQD 399 (478)
T ss_dssp HCCCGGGHHHHHHHHHHHHSCHHHHTTCEEEEEEEETTTEEEEEEEEECSC
T ss_pred cCchHHHHHHHHHHHHHHhCCccCCCCCEEEEEEEcchhhhEEEEEEEeCC
Confidence 999999999999999999998 8899999999999999999999999765
No 35
>3sqz_A Putative hydroxymethylglutaryl-COA synthase; thiolase fold, HMG_COA synthase, transferase; HET: COA; 1.20A {Streptococcus mutans} PDB: 3leh_A
Probab=100.00 E-value=4.5e-43 Score=368.94 Aligned_cols=303 Identities=14% Similarity=0.198 Sum_probs=232.5
Q ss_pred CceEEEEeeeecCCCCcccChHHHHHHHhhhhcCCcchHHHHHHHHHHcCCCceeecCCCCcCCCCCCchHHHHHhHHHH
Q 011007 86 RHVYLVDYACYKPPVTCRVPFATFMEHSRLILKNNPKSVEFQMRILERSGLGEETCLPPAIHYIPPTPTMEAARGEAELV 165 (496)
Q Consensus 86 ~~v~Iv~~~~y~P~~~~~v~~~~~~e~~~~~~~~~~~~~~f~~~i~~~sGi~~r~~~~~~~~~~~~~~~~~~~~~ea~~l 165 (496)
.+++|.+++.|+|+ ++++|+++.+..+. +++ ||.+++|+++|+++++++. +.+|
T Consensus 35 m~v~I~~ig~ylP~--~~v~n~el~~~~g~----~~~------~i~~~~Gi~~r~~a~~~e~--------------~~~L 88 (425)
T 3sqz_A 35 MRIGIDKIGFTSSQ--YVLNMKDLAEARGE----DPQ------KFSKGLLLNALSIAPITDD--------------VVTL 88 (425)
T ss_dssp CCEEEEEEEEECCS--EEEEHHHHHHHHTC----CHH------HHHTTTCCCEEEECCTTSC--------------HHHH
T ss_pred CeEEEEEEEEECCC--cEEcHHHHHHHhCC----CHH------HHHHHcCeEEEEECCCCCC--------------HHHH
Confidence 47999999999999 99999999988763 444 6888999999999887764 7899
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEeec-cCCCCCCcHHHHHHHHcCCCCCceeeEecCCCcchHHHHHHHHHHHHhcCCCC
Q 011007 166 IFSAMDSLLQKTGLKPKDIDILIVNC-SLFSPTPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLLQVHPNS 244 (496)
Q Consensus 166 a~~Aa~~aL~~agi~p~dID~LI~~s-s~~~~~Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL~~~~~~ 244 (496)
+.+|+++||+++| |+|||.||++| ++++..|+.+++|+++||+++++.+||++ ++|+||+.||.+|.+++++++.+
T Consensus 89 a~~Aa~~aL~~ag--~~dId~li~~t~t~~~~~ps~a~~v~~~LGl~~~~~~~dv~-~aC~gg~~AL~~A~~~i~sg~~~ 165 (425)
T 3sqz_A 89 AAGSANEILTAED--KEKIDMVILATESSVDQSKAGAVYVHSLLGIQPFARSFEMK-EAAYSATAALNYAKLHVEKHPDT 165 (425)
T ss_dssp HHHHHHTTCCHHH--HHHEEEEEEECSCCSCSSSCHHHHHHHHTTCCSSCEEEEEC-CC-CHHHHHHHHHHHHHHHSTTC
T ss_pred HHHHHHHHHHhCC--hhhCCEEEEEecccccccchHHHHHHHHhCCCCCeeEEEEc-CHhHHHHHHHHHHHHHHHcCCCC
Confidence 9999999999998 99999999986 46788999999999999999779999999 69999999999999999999999
Q ss_pred EEEEEEECCCCCCCccCCCccccccccccccccEEEEEeccCCcccccceeEeeEEEEEecCCcccccce--eecccCCC
Q 011007 245 NAVVVSTEIITPNYYQGNERAMLLPNCLFRMGGAAILLSNRRRNRSRAKYRLVHVVRTHKGADDKAYRCV--FEEEDKEG 322 (496)
Q Consensus 245 ~aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAaA~lLs~~~~~~~~~~~~L~~~~~t~~~~d~~~~~~~--~~~~d~~G 322 (496)
+||||++|+.+.. .++.+ ..+|||||+|+||++++.- +.....+++...+.+ +.+.+. .
T Consensus 166 ~vLVvgae~~s~~-~~~~~------~~lfGDGA~A~ll~~~~~i-----------l~~~~~s~~~~~d~~df~~p~~~-~ 226 (425)
T 3sqz_A 166 RVLVLASDIAKYG-IGTPG------ESTQGAGSIAMLVKKDPRI-----------LILHDETLAQTRDIMDFWRPNYT-T 226 (425)
T ss_dssp EEEEEEEEEECCC-TTSGG------GGGCEEEEEEEEEEESCSS-----------EEECSCCEEEECCCCSEECCTTC-S
T ss_pred eEEEEEEehhccc-CCCCC------CCcccceeeEEEeecCCce-----------EEEEeecccchhhcccccccCCC-c
Confidence 9999999999862 22222 5789999999999986521 111122222221211 233211 0
Q ss_pred ceeeeechhHHHHHHHHhhhhhhhcCCCccchhHHHHHHHHHH---HHhhhcc-ccCCcccchhccccEEEeccCC----
Q 011007 323 KVGISLSKDLMAIAGEALKSNITTIGPLVLPASEQLLFLMTLI---GRKIFNP-KWKPYIPDFKQAFEHFCIHAGG---- 394 (496)
Q Consensus 323 ~~g~~ls~d~~~v~g~~l~~~i~~~gp~vlp~~e~~~~~~~~~---~~~v~~~-~~~~~~p~~~~did~f~~H~~~---- 394 (496)
. +.+.|. +.+.++...+ .++++++ .+. .+|||+|++||++
T Consensus 227 ~---------~~~dG~-----------------~~~~~~~~~l~~~~~~~l~~~gl~------~~Did~~v~Hqp~~k~~ 274 (425)
T 3sqz_A 227 T---------PYVNGM-----------------YSTKQYLDMLKTTWAEYQKRFDVS------LTDFAAFCFHLPFPKLA 274 (425)
T ss_dssp S---------CEECHH-----------------HHHHHHHHHHHHHHHHHHHHHTCC------GGGCSEEEECCSSHHHH
T ss_pred c---------eeeccH-----------------hHHHHHHHHHHHHHHHHHHHhCCC------HHHCCEEEECCCcchhH
Confidence 0 000010 0011111111 1223322 222 4899999999955
Q ss_pred ----HHHHH-----HHHHHcCCChhhHhhhhhhhcccCCccCCchHHHHHHHHHh-CCCCCCCEEEEEeechhHhhhhee
Q 011007 395 ----RAVID-----ELQKNLQLSAEHVEASRMTLHRFGNTSSSSLWYEMSYIEEK-GRMKKGDRVWQIAFGSGFKCNSAV 464 (496)
Q Consensus 395 ----~~v~~-----~i~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~-g~i~~Gd~Vll~~fG~G~~~~sav 464 (496)
+++++ .+++.|+++.++. ..++++||||+|+|+++.|+.++++ |++++||+|++++||+|+++..+.
T Consensus 275 ~ka~~ril~~~~~~~~~~~l~~~~e~~---~~~~~~~GNt~sASi~l~L~~~l~~~g~l~~Gd~ill~s~GsG~~ae~~s 351 (425)
T 3sqz_A 275 LKGFNKIMDKQVPSDLQEKLKVNFEAS---ILYSKQIGNIYTGSLFLGLLSLLENSQNLVAGDKIALFSYGSGAVAEIFT 351 (425)
T ss_dssp HHHHHHHCCTTSCHHHHHHHHHHHHHH---HTTHHHHBCCGGGHHHHHHHHHHHHCSSCCTTCEEEEEEEETTTEEEEEE
T ss_pred HHHHHHHHhccchHHHHHHhCCCHHHH---hhHHhccCccHHHHHHHHHHHHHHhcCCCCCCCEEEEEcccCCcceEEEE
Confidence 55555 7888899998887 6899999999999999999999998 899999999999999999999999
Q ss_pred eEeeccC
Q 011007 465 WKCNKTI 471 (496)
Q Consensus 465 ~r~~~~~ 471 (496)
+++....
T Consensus 352 ~~v~~~~ 358 (425)
T 3sqz_A 352 GTLVKGF 358 (425)
T ss_dssp EEECTTG
T ss_pred EEEcccH
Confidence 9987654
No 36
>2v4w_A Hydroxymethylglutaryl-COA synthase, mitochondrial; steroid biosynthesis, cholesterol biosynthesis, mitochondrion, phosphoprotein; HET: HMG; 1.7A {Homo sapiens} PDB: 2wya_A*
Probab=100.00 E-value=3.2e-42 Score=364.00 Aligned_cols=315 Identities=15% Similarity=0.226 Sum_probs=235.3
Q ss_pred cCCCceEEEEeeeecCCCCcccChHHHHHHHhhhhcCCcchHHHHHHHHHHcCCCcee--ecCCCCcCCCCCCchHHHHH
Q 011007 83 SKPRHVYLVDYACYKPPVTCRVPFATFMEHSRLILKNNPKSVEFQMRILERSGLGEET--CLPPAIHYIPPTPTMEAARG 160 (496)
Q Consensus 83 ~~~~~v~Iv~~~~y~P~~~~~v~~~~~~e~~~~~~~~~~~~~~f~~~i~~~sGi~~r~--~~~~~~~~~~~~~~~~~~~~ 160 (496)
+||.+++|.++|.|+|+ ++|+|+++.+..+. +. +..++||++|+ ++++++.
T Consensus 1 ~~~~~vgI~gig~ylP~--~~v~n~el~~~~g~----~~--------~~~~~Gig~r~~~va~~~E~------------- 53 (460)
T 2v4w_A 1 SMPKDVGILALEVYFPA--QYVDQTDLEKYNNV----EA--------GKYTVGLGQTRMGFCSVQED------------- 53 (460)
T ss_dssp CCCSSCEEEEEEEECCS--EEEEHHHHHHHTTC----CT--------TCCCCCCCCCEEECCCTTCC-------------
T ss_pred CCCCceEEEEEEEECCC--cEecHHHHHHHhCC----CH--------HHeeeeeeeEEEEECCCCCC-------------
Confidence 47899999999999999 99999999988663 22 22457777766 6665553
Q ss_pred hHHHHHHHHHHHHHHHcCCCcCCcCEEEeec-cCCCCCCcHHHHHHHHcCC--CCCceeeEecCCCcchHHHHHHHHHHH
Q 011007 161 EAELVIFSAMDSLLQKTGLKPKDIDILIVNC-SLFSPTPSLSAMVINKYKL--RSNIKSFNLSGMGCSAGLISIDLARDL 237 (496)
Q Consensus 161 ea~~la~~Aa~~aL~~agi~p~dID~LI~~s-s~~~~~Ps~a~~I~~~Lgl--~~~~~~~dl~g~gCsg~l~al~lA~~l 237 (496)
+.+|+++|+++||+++|++|+|||+||++| ++++..|+.+++|+++||+ +.++.+||++ ++|+||+.||.+|.++
T Consensus 54 -~~~La~~Aa~~AL~~agi~~~dId~IivaT~t~~~~~ps~A~~v~~~LGl~g~~~~~a~Dv~-~ACsGg~~AL~~A~~~ 131 (460)
T 2v4w_A 54 -INSLCLTVVQRLMERIQLPWDSVGRLEVGTETIIDKSKAVKTVLMELFQDSGNTDIEGIDTT-NACYGGTASLFNAANW 131 (460)
T ss_dssp -HHHHHHHHHHHHHHHHTCCGGGEEEEEEECSCCSCSSSCHHHHHGGGTGGGTCCCCBCCEEE-SGGGHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCCcHHHHHHHHhCCCCCCCcEEEEec-chhHHHHHHHHHHHHH
Confidence 789999999999999999999999999997 5788899999999999999 3578999999 6999999999999999
Q ss_pred HhcCC--CCEEEEEEECCCCCCCccCCCccccccccccccccEEEEEeccCCcccccceeEeeEEEEEecCCccccccee
Q 011007 238 LQVHP--NSNAVVVSTEIITPNYYQGNERAMLLPNCLFRMGGAAILLSNRRRNRSRAKYRLVHVVRTHKGADDKAYRCVF 315 (496)
Q Consensus 238 L~~~~--~~~aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAaA~lLs~~~~~~~~~~~~L~~~~~t~~~~d~~~~~~~~ 315 (496)
+++++ .++||||++|+.+ +.++++|. ++||||+|+||++++. + ....++++...+.++
T Consensus 132 I~sg~~~~~~aLVVgaE~~s--~~~~~~r~------t~GDGA~A~ll~~~~~--------l----~~~~~~~Gs~~~~l~ 191 (460)
T 2v4w_A 132 MESSSWDGRYAMVVCGDIAV--YPSGNARP------TGGAGAVAMLIGPKAP--------L----ALERGLRGTHMENVY 191 (460)
T ss_dssp HTSTTCCSCEEEEEEEEEEC--CCSSTTGG------GCEEEEEEEEEESSCS--------E----EECTTCCEEEECCCC
T ss_pred HHhCCccCCEEEEEeccccc--ccCCCCCc------ccccceeEEEeecCCC--------c----eEEEcceecceeeee
Confidence 99998 4999999999987 44556654 3599999999997542 1 123445554433332
Q ss_pred ecccCCCceeeeechhHHHHHHHHhhhhhhhcCCCccchhHHHHHHHHHH----------HHhhhccccCCcccchhccc
Q 011007 316 EEEDKEGKVGISLSKDLMAIAGEALKSNITTIGPLVLPASEQLLFLMTLI----------GRKIFNPKWKPYIPDFKQAF 385 (496)
Q Consensus 316 ~~~d~~G~~g~~ls~d~~~v~g~~l~~~i~~~gp~vlp~~e~~~~~~~~~----------~~~v~~~~~~~~~p~~~~di 385 (496)
......+.. +.|.+.|+ +.+++++..+ .+++++..-.. .....+||
T Consensus 192 d~~~p~~~~------~~~~mdG~-----------------~v~~~av~~l~~~~~~y~~~~~~~l~~~~~~-~gl~~~di 247 (460)
T 2v4w_A 192 DFYKPNLAS------EYPIVDGK-----------------LSIQCYLRALDRCYTSYRKKIQNQWKQAGSD-RPFTLDDL 247 (460)
T ss_dssp SEECCCTTC------SCCEECHH-----------------HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC-CCCCGGGC
T ss_pred ccCCCCCCC------CCeEEeCH-----------------HHHHHHHHHHHHHHHHHHHHHHHHHHhhccc-cCCCHHHh
Confidence 110000000 00111111 1111222211 12233220000 01124899
Q ss_pred cEEEeccCCHHHHHHHHHHcCCC----------------------------------------------hhhHhhhhhhh
Q 011007 386 EHFCIHAGGRAVIDELQKNLQLS----------------------------------------------AEHVEASRMTL 419 (496)
Q Consensus 386 d~f~~H~~~~~v~~~i~~~Lgl~----------------------------------------------~e~~~~S~~~l 419 (496)
||||+||+|.+|++.+.++|+++ .+|+.++..+.
T Consensus 248 d~~v~Hqan~rii~~~~~rL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ekv~~~l~~~ 327 (460)
T 2v4w_A 248 QYMIFHTPFCKMVQKSLARLMFNDFLSASSDTQTSLYKGLEAFGGLKLEDTYTNKDLDKALLKASQDMFDKKTKASLYLS 327 (460)
T ss_dssp SEEEECCSSHHHHHHHHHHHHHHHHHHSCHHHHHHHCGGGGGGTTCCGGGGTTCHHHHHHHHHHHHHHHHHHTGGGGHHH
T ss_pred ceEeecCCchHHHHHHHHHcCCCcccccccccccccccchhhhccccccccccchhHHHHHHhhhhhhhHhhcccccchh
Confidence 99999999999999999999988 58887766677
Q ss_pred cccCCccCCchHHHHHHHHHhCC--CCCCCEEEEEeechhHhhhheeeEeecc
Q 011007 420 HRFGNTSSSSLWYEMSYIEEKGR--MKKGDRVWQIAFGSGFKCNSAVWKCNKT 470 (496)
Q Consensus 420 ~r~GNtsSaSi~~~La~~~~~g~--i~~Gd~Vll~~fG~G~~~~sav~r~~~~ 470 (496)
.++|||+++|+|+.|+.++++|+ +++||+|++.|||+|++....-.+....
T Consensus 328 ~~~GNt~aASiplaL~s~l~~~~~~~~~G~rill~syGsG~~s~~fs~~v~~~ 380 (460)
T 2v4w_A 328 THNGNMYTSSLYGCLASLLSHHSAQELAGSRIGAFSYGSGLAASFFSFRVSQD 380 (460)
T ss_dssp HHHCCCGGGHHHHHHHHHHHHSCHHHHTTCEEEEEEEETTTEEEEEEEEECSC
T ss_pred hccCccHHHHHHHHHHHHHHhCCcccCCCCEEEEEEecCCcceeEEEEEEeCC
Confidence 99999999999999999999985 7899999999999999887777776554
No 37
>2f82_A HMG-COA synthase; HMGS1, transferase; 2.10A {Brassica juncea} PDB: 2f9a_A* 2fa0_A* 2fa3_A*
Probab=100.00 E-value=6.1e-42 Score=363.86 Aligned_cols=318 Identities=14% Similarity=0.161 Sum_probs=234.0
Q ss_pred CCceEEEEeeeecCCCCcccChHHHHHHHhhhhcCCcchHHHHHHHHHHcCCCceeecCCCCcCCCCCCchHHHHHhHHH
Q 011007 85 PRHVYLVDYACYKPPVTCRVPFATFMEHSRLILKNNPKSVEFQMRILERSGLGEETCLPPAIHYIPPTPTMEAARGEAEL 164 (496)
Q Consensus 85 ~~~v~Iv~~~~y~P~~~~~v~~~~~~e~~~~~~~~~~~~~~f~~~i~~~sGi~~r~~~~~~~~~~~~~~~~~~~~~ea~~ 164 (496)
|.+++|.++++|+|+ ++|+++++.+..+. +++ |+...+|+.+++++++++. +.+
T Consensus 1 ~~~v~I~~ig~y~P~--~~v~~~~l~~~~g~----~~~------~~~~g~G~~~~~~~~~~e~--------------~~~ 54 (450)
T 2f82_A 1 AKNVGILAMDIYFPP--TCVQQEALEAHDGA----SKG------KYTIGLGQDCLAFCTELED--------------VIS 54 (450)
T ss_dssp CCSCEEEEEEEECCS--EEEEHHHHHHHTTC----CTT------TTTTTSCCCEEECCCTTCC--------------HHH
T ss_pred CCceEEEEEEEECCC--eeccHHHHHHHhCC----CHH------HhhhhhCceeeeeCCCCCC--------------HHH
Confidence 467999999999999 89999999988663 454 5655677777776666543 789
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEeec-cCCCCCCcHHHHHHHHcCC--CCCceeeEecCCCcchHHHHHHHHHHHHhcC
Q 011007 165 VIFSAMDSLLQKTGLKPKDIDILIVNC-SLFSPTPSLSAMVINKYKL--RSNIKSFNLSGMGCSAGLISIDLARDLLQVH 241 (496)
Q Consensus 165 la~~Aa~~aL~~agi~p~dID~LI~~s-s~~~~~Ps~a~~I~~~Lgl--~~~~~~~dl~g~gCsg~l~al~lA~~lL~~~ 241 (496)
|+..|++++|+++|++|++||.||++| ++++..|+.+.+|+++||+ ++++.+++++ ++|+|++.||.+|.++++++
T Consensus 55 La~~Aa~~aL~~agi~~~~Id~li~~t~t~~~~~p~~a~~v~~~lgl~g~~~~~~~~v~-~aC~gg~~AL~~A~~~I~sg 133 (450)
T 2f82_A 55 MSFNAVTSLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQLFEKCGNTDVEGVDST-NACYGGTAALLNCVNWVESN 133 (450)
T ss_dssp HHHHHHHHHHHHTTCCGGGEEEEEEECCCCSCSSSCHHHHHTHHHHTTTCCCCBCCEEC-SGGGHHHHHHHHHHHHHHST
T ss_pred HHHHHHHHHHHHcCcCHHHCCEEEEEecCCCCCCCcHHHHHHHHhCCcCCCCceEEEhh-hhhHHHHHHHHHHHHHHHcC
Confidence 999999999999999999999999886 4678899999999999999 4589999999 69999999999999999999
Q ss_pred CC--CEEEEEEECCCCCCCccCCCccccccccccccccEEEEEeccCCcccccceeEeeEEEEEecCCcccccceeeccc
Q 011007 242 PN--SNAVVVSTEIITPNYYQGNERAMLLPNCLFRMGGAAILLSNRRRNRSRAKYRLVHVVRTHKGADDKAYRCVFEEED 319 (496)
Q Consensus 242 ~~--~~aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAaA~lLs~~~~~~~~~~~~L~~~~~t~~~~d~~~~~~~~~~~d 319 (496)
+. ++||||++|.++. .++. ...+|||||+|+||++.+.. .+.. +...++. ++ .++ .+.+..
T Consensus 134 ~~~~~~vLVvg~e~~~~-----~~~~---~~~~fGDGA~A~ll~~~~~~----~~~~-~~~g~~~--~~-~~d-~~~p~~ 196 (450)
T 2f82_A 134 SWDGRYGLVICTDSAVY-----AEGP---ARPTGGAAAIAMLIGPDAPI----VFES-KLRGSHM--AH-VYD-FYKPNL 196 (450)
T ss_dssp TCCSCEEEEEEEEEECC-----SSST---TGGGCEEEEEEEEEESSCSE----EEEE-EEEEEEE--CC-CCS-EECCCT
T ss_pred CCcCCeEEEEEeeeccc-----cCCC---CCcccccceEEEEeccCCce----EEEe-ccceeeh--hh-ccc-eeeeCC
Confidence 86 9999999998762 2444 46899999999999876531 1111 1111111 11 111 122211
Q ss_pred CCCceeeeechhHHHHHHHHhhhhhhhcCCCccchhHHHHHHHHHHHHhhhcccc--CCcccchhccccEEEeccCCHHH
Q 011007 320 KEGKVGISLSKDLMAIAGEALKSNITTIGPLVLPASEQLLFLMTLIGRKIFNPKW--KPYIPDFKQAFEHFCIHAGGRAV 397 (496)
Q Consensus 320 ~~G~~g~~ls~d~~~v~g~~l~~~i~~~gp~vlp~~e~~~~~~~~~~~~v~~~~~--~~~~p~~~~did~f~~H~~~~~v 397 (496)
+..... ...+......-+. +....+++++..- +. .+...+|||||++||+|.++
T Consensus 197 ~~~~~~-~~G~~~~~~~~~~----------------------l~~~~~~~l~~~~~~~~-agl~~~did~~v~Hq~~~~i 252 (450)
T 2f82_A 197 ASEYPV-VDGKLSQTCYLMA----------------------LDSCYKHLCNKFEKLEG-KEFSINDADYFVFHSPYNKL 252 (450)
T ss_dssp TCSCCE-ECHHHHHHHHHHH----------------------HHHHHHHHHHHHHHHHS-SCCCGGGCSEEEECCSSHHH
T ss_pred CCCcee-ecCccHHHHHHHH----------------------HHHHHHHHHHHhhhccc-cCCChhhcCEEEecCChHHH
Confidence 100000 0001111110000 0001112221000 00 11225899999999999999
Q ss_pred HHHHHHHcC------------------CCh----------------------------hhHhhhhhhhcccCCccCCchH
Q 011007 398 IDELQKNLQ------------------LSA----------------------------EHVEASRMTLHRFGNTSSSSLW 431 (496)
Q Consensus 398 ~~~i~~~Lg------------------l~~----------------------------e~~~~S~~~l~r~GNtsSaSi~ 431 (496)
++.+.+.|+ +++ ++++||+.++++||||+|+|+|
T Consensus 253 ~~~~~~~L~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ek~~~~~~~~~~~~k~~~s~~~~~~~GN~~saSi~ 332 (450)
T 2f82_A 253 VQKSFARLLYNDFLRNASSIDEAAKEKFTPYSSLSLDESYQSRDLEKVSQQLAKTYYDAKVQPTTLVPKQVGNMYTASLY 332 (450)
T ss_dssp HHHHHHHHHHHHHHTTCTTCCHHHHHHHGGGTTCCHHHHHTCHHHHHHHHHHHHHHHHHHTGGGCHHHHHHCCCGGGHHH
T ss_pred HHHHHHHhcccccccccccccccccccccccccccccccccchhHHHHHhhhhHHHHHHhhhHHHHHHHhcCchHHHHHH
Confidence 999999998 454 6788888899999999999999
Q ss_pred HHHHHHHHhCC-CCCCCEEEEEeechhHhhhheeeEeecc
Q 011007 432 YEMSYIEEKGR-MKKGDRVWQIAFGSGFKCNSAVWKCNKT 470 (496)
Q Consensus 432 ~~La~~~~~g~-i~~Gd~Vll~~fG~G~~~~sav~r~~~~ 470 (496)
+.|+.++++|+ +++||+|+++|||+|++|++++|++...
T Consensus 333 l~L~~~l~~~~~~~~Gd~ill~s~GsG~~~~~~~l~~~~~ 372 (450)
T 2f82_A 333 AAFASLVHNKHSDLAGKRVVMFSYGSGSTATMFSLRLCEN 372 (450)
T ss_dssp HHHHHHHHHHGGGCTTCEEEEEEEETTTEEEEEEEEECCC
T ss_pred HHHHHHHHhCccCCCCCEEEEEeecCCcccEEEEEEEeCC
Confidence 99999999885 8899999999999999999999999865
No 38
>1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2
Probab=100.00 E-value=3.1e-41 Score=342.53 Aligned_cols=308 Identities=21% Similarity=0.315 Sum_probs=240.1
Q ss_pred eEEEEeeeecCCCCcccChHHHHHHHhhhhcCCcchHHHHHHHHHHcCCCceeecCCCCcCCCCCCchHHHHHhHHHHHH
Q 011007 88 VYLVDYACYKPPVTCRVPFATFMEHSRLILKNNPKSVEFQMRILERSGLGEETCLPPAIHYIPPTPTMEAARGEAELVIF 167 (496)
Q Consensus 88 v~Iv~~~~y~P~~~~~v~~~~~~e~~~~~~~~~~~~~~f~~~i~~~sGi~~r~~~~~~~~~~~~~~~~~~~~~ea~~la~ 167 (496)
++|.++++|+|+ .+++|+++.+..+. ++ +||.+++||++|+++++++. +.+|+.
T Consensus 2 ~~I~~~g~~~P~--~~~~~~~~~~~~~~----~~------~~i~~~~Gi~~r~~~~~~~~--------------~~~la~ 55 (322)
T 1ub7_A 2 SGILALGAYVPE--RVMTNADFEAYLDT----SD------EWIVTRTGIKERRVAAEDEY--------------TSDLAF 55 (322)
T ss_dssp CEEEEEEEECCS--EEEEHHHHHTTSSC----CH------HHHHHHTCCCEEEECCTTCC--------------HHHHHH
T ss_pred cEEEEEEEECCC--ceecHHHHHHHhCC----CH------HHHHHhcCceEEeecCCCCC--------------HHHHHH
Confidence 689999999999 89999999876442 33 37899999999999876543 689999
Q ss_pred HHHHHHHHHcCCCcCCcCEEEeecc-CCCCCCcHHHHHHHHcCCCCCceeeEecCCCcchHHHHHHHHHHHHhcCCCCEE
Q 011007 168 SAMDSLLQKTGLKPKDIDILIVNCS-LFSPTPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLLQVHPNSNA 246 (496)
Q Consensus 168 ~Aa~~aL~~agi~p~dID~LI~~ss-~~~~~Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL~~~~~~~a 246 (496)
+|++++|+++|++|++||.||++|+ +++..|+.+.+|+.+||+ ++++++++ ++|++++.||..|.++|++++.++|
T Consensus 56 ~a~~~al~~ag~~~~~id~vi~~~~~~~~~~~~~a~~v~~~lgl--~~~~~~v~-~aCas~~~al~~A~~~i~~g~~~~v 132 (322)
T 1ub7_A 56 KAVEDLLRRHPGALEGVDAVIVATNTPDALFPDTAALVQARFGL--KAFAYDLL-AGCPGWIYALAQAHALVEAGLAQKV 132 (322)
T ss_dssp HHHHHHHHHSTTTTTTEEEEEEECSSCSEEESCHHHHHHHHTTC--CCEEEEEE-CSTTHHHHHHHHHHHHHHTTSCSEE
T ss_pred HHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCC--CCEEEeeC-ccchHHHHHHHHHHHHHHcCCCCEE
Confidence 9999999999999999999998865 567788999999999999 58999999 6999999999999999999999999
Q ss_pred EEEEECCCCCCCccCCCccccccccccccccEEEEEeccCCcccccceeEeeEEEEEecCCcccccceeecccCCC----
Q 011007 247 VVVSTEIITPNYYQGNERAMLLPNCLFRMGGAAILLSNRRRNRSRAKYRLVHVVRTHKGADDKAYRCVFEEEDKEG---- 322 (496)
Q Consensus 247 LVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAaA~lLs~~~~~~~~~~~~L~~~~~t~~~~d~~~~~~~~~~~d~~G---- 322 (496)
||+++|.++. +.++.|+. +..+|||||+|+||++.+... ++ ..+...+++...+.+..+.++..
T Consensus 133 lv~g~e~~s~-~~~~~d~~---~~~~~GdGA~A~vL~~~~~~~-----~i---~~~~~~~~g~~~~~~~~~~~~~~~p~~ 200 (322)
T 1ub7_A 133 LAVGAEALSK-IIDWNDRA---TAVLFGDGGGAAVVGKVREGY-----GF---RSFVLGADGTGAKELYHACVAPRLPDG 200 (322)
T ss_dssp EEEEEECGGG-TSCTTCHH---HHTTBCCEEEEEEEECCCTTC-----EE---EEEEEEECGGGCTTEEEESSCSBCTTS
T ss_pred EEEEechhcc-ccChhhcc---cceeeccccEEEEEEecCCCC-----ce---eEEEEEEecCCCCeEEeCCCCCCCCcc
Confidence 9999999886 33445544 467999999999999865421 23 23334456655554444321100
Q ss_pred --cee-e-eechhHHHHHHHHhhhhhhhcCCCccchhHHHHHHHHHHHHhhhcc-ccCCcccchhccccEEEeccCCHHH
Q 011007 323 --KVG-I-SLSKDLMAIAGEALKSNITTIGPLVLPASEQLLFLMTLIGRKIFNP-KWKPYIPDFKQAFEHFCIHAGGRAV 397 (496)
Q Consensus 323 --~~g-~-~ls~d~~~v~g~~l~~~i~~~gp~vlp~~e~~~~~~~~~~~~v~~~-~~~~~~p~~~~did~f~~H~~~~~v 397 (496)
..+ + ...+++++...+. .....++.++. .++ ++|||+|++||.|..+
T Consensus 201 ~~~~~~~~~~g~~~~~~~~~~----------------------~~~~i~~al~~agl~------~~did~~~~H~~~~~~ 252 (322)
T 1ub7_A 201 TSMKNRLYMNGREVFKFAVRV----------------------MNTATLEAIEKAGLT------PEDIRLFVPHQANLRI 252 (322)
T ss_dssp CBCCSSCEECHHHHHHHHHHH----------------------HHHHHHHHHHHHTCC------GGGCSEEEECCSCHHH
T ss_pred ccccceEEecCHHHHHHHHHH----------------------HHHHHHHHHHHcCCC------HHHCCEEEEcCCCHHH
Confidence 000 0 0011122111000 00112333332 233 4899999999999999
Q ss_pred HHHHHHHcCCChhhHhhhhhhhcccCCccCCchHHHHHHHHHhCCCCCCCEEEEEeechhHhhhheeeEe
Q 011007 398 IDELQKNLQLSAEHVEASRMTLHRFGNTSSSSLWYEMSYIEEKGRMKKGDRVWQIAFGSGFKCNSAVWKC 467 (496)
Q Consensus 398 ~~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~g~i~~Gd~Vll~~fG~G~~~~sav~r~ 467 (496)
++.+++.||++++++ ..++.+||||+++|+++.|.+++++|++++||++++.+||+|++|++++||+
T Consensus 253 ~d~~~~~lg~~~~~~---~~~~~~~Gh~~~As~~~~l~~~l~~g~~~~g~~~l~~~~G~G~~~~~~vl~~ 319 (322)
T 1ub7_A 253 IDAARERLGLPWERV---AVNVDRYGNTSTASIPLALKEAVDAGRIREGDHVLLVSFGAGLTWAAAVLTW 319 (322)
T ss_dssp HHHHHHTTTCCGGGB---CCCHHHHCBCGGGHHHHHHHHHHHHTSSCTTCEEEEEEEETTTEEEEEEEEC
T ss_pred HHHHHHHcCCCHHHH---HHHHHhhCcHHHHHHHHHHHHHHHhCCCCCCCEEEEEEEChhheeEEEEEEe
Confidence 999999999999998 4689999999999999999999999999999999999999999999999997
No 39
>1xpm_A 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA synthase, HMGS, coenzyme A, thiolase fold, condensing enzyme; HET: HMG CAA; 1.60A {Staphylococcus aureus subsp} SCOP: c.95.1.2 c.95.1.2 PDB: 1xpl_A* 1xpk_A* 1tvz_A 1txt_A*
Probab=100.00 E-value=8.9e-42 Score=357.08 Aligned_cols=308 Identities=15% Similarity=0.163 Sum_probs=235.3
Q ss_pred ceEEEEeeeecCCCCcccChHHHHHHHhhhhcCCcchHHHHHHHHHHcCCCceeecCCCCcCCCCCCchHHHHHhHHHHH
Q 011007 87 HVYLVDYACYKPPVTCRVPFATFMEHSRLILKNNPKSVEFQMRILERSGLGEETCLPPAIHYIPPTPTMEAARGEAELVI 166 (496)
Q Consensus 87 ~v~Iv~~~~y~P~~~~~v~~~~~~e~~~~~~~~~~~~~~f~~~i~~~sGi~~r~~~~~~~~~~~~~~~~~~~~~ea~~la 166 (496)
+++|.++++|+|+ ++++|+++.+..+. +++ ||.+++||++|+++++++. +.+|+
T Consensus 2 ~v~I~~ig~y~P~--~~v~~~~l~~~~~~----~~~------~i~~~~Gi~~r~~~~~~e~--------------~~~la 55 (396)
T 1xpm_A 2 AIGIDKINFYVPK--YYVDMAKLAEARQV----DPN------KFLIGIGQTEMAVSPVNQD--------------IVSMG 55 (396)
T ss_dssp CEEEEEEEEECCS--EEEEHHHHHHHTTS----CHH------HHHTTTCCSEEEECCTTCC--------------HHHHH
T ss_pred ceEEEEEEEeCCC--eEecHHHHHHHhCC----CHH------HHhhhcCceEEEeCCCCCC--------------HHHHH
Confidence 4899999999999 89999999987653 443 7899999999999877653 78999
Q ss_pred HHHHHHHHHHcCCCcCCcCEEEeecc-CCCCCCcHHHHHHHHcCCCCCceeeEecCCCcchHHHHHHHHHHHHhcCCCCE
Q 011007 167 FSAMDSLLQKTGLKPKDIDILIVNCS-LFSPTPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLLQVHPNSN 245 (496)
Q Consensus 167 ~~Aa~~aL~~agi~p~dID~LI~~ss-~~~~~Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL~~~~~~~ 245 (496)
..|++++|++ ++|++||.||++|+ +++..|+.+.+|+++||+++++.+++++ ++|+|++.||..|.+++++++.++
T Consensus 56 ~~Aa~~aL~~--~~~~~Id~li~~t~~~~~~~p~~a~~v~~~lGl~~~~~~~~v~-~aC~sg~~Al~~A~~~I~sg~~~~ 132 (396)
T 1xpm_A 56 ANAAKDIITD--EDKKKIGMVIVATESAVDAAKAAAVQIHNLLGIQPFARCFEMK-EACYAATPAIQLAKDYLATRPNEK 132 (396)
T ss_dssp HHHHHTTCCH--HHHHHEEEEEEECSSCSBSSSCHHHHHHHHTTCCSSCEEEEEE-STTTTHHHHHHHHHHHHTTCTTCE
T ss_pred HHHHHHHHhc--CCHHHCCEEEEEeCCCCCCCCCHHHHHHHHhCCCCCceEEEec-cccHHHHHHHHHHHHHHHcCCCCE
Confidence 9999999988 78999999998864 5678899999999999998779999999 699999999999999999999999
Q ss_pred EEEEEECCCCCCCccCCCccccccccccccccEEEEEeccCCcccccceeEeeEEEEEecCCcccccc---eeecccCCC
Q 011007 246 AVVVSTEIITPNYYQGNERAMLLPNCLFRMGGAAILLSNRRRNRSRAKYRLVHVVRTHKGADDKAYRC---VFEEEDKEG 322 (496)
Q Consensus 246 aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAaA~lLs~~~~~~~~~~~~L~~~~~t~~~~d~~~~~~---~~~~~d~~G 322 (496)
||||++|. +.... +.. ...+|||||+|+||++.+.- .....+ ++...+. .+.+++. +
T Consensus 133 vLvvg~e~-s~~~~---~~~---~~~~~GdGA~A~vl~~~~~i-----------~~~~~~-~g~~~~d~~~~~~p~~~-~ 192 (396)
T 1xpm_A 133 VLVIATDT-ARYGL---NSG---GEPTQGAGAVAMVIAHNPSI-----------LALNED-AVAYTEDVYDFWRPTGH-K 192 (396)
T ss_dssp EEEEEEEE-ECCCT---TCS---SGGGCEEEEEEEEEEESCSS-----------EEECSC-CEEEECCCCSEECBTTC-S
T ss_pred EEEEeehh-hcccc---CCC---CCcccccceEEEEeccCCce-----------EEEEec-cccccceEEEeeccCCC-C
Confidence 99999997 43211 222 36899999999999975321 111111 2211111 1223211 1
Q ss_pred ceeeeechhHHHHHHHHhhhhhhhcCCCccchhHHHHHHHHHHHHhhhcc-ccCCcccchhccccEEEeccCCHHHHHHH
Q 011007 323 KVGISLSKDLMAIAGEALKSNITTIGPLVLPASEQLLFLMTLIGRKIFNP-KWKPYIPDFKQAFEHFCIHAGGRAVIDEL 401 (496)
Q Consensus 323 ~~g~~ls~d~~~v~g~~l~~~i~~~gp~vlp~~e~~~~~~~~~~~~v~~~-~~~~~~p~~~~did~f~~H~~~~~v~~~i 401 (496)
...+ ..+.+.....+ .+....++.+++ .+. .+|||+|++||+|.++++.+
T Consensus 193 ~~~~-~G~~~~~~~~~----------------------~~~~~~~~~L~~agl~------~~did~~~~H~~~~~~~~~~ 243 (396)
T 1xpm_A 193 YPLV-DGALSKDAYIR----------------------SFQQSWNEYAKRQGKS------LADFASLCFHVPFTKMGKKA 243 (396)
T ss_dssp SCEE-CHHHHHHHHHH----------------------HHHHHHHHHHHHHTCC------GGGCSEEEECCSSHHHHHHH
T ss_pred CeEE-EcHHHHHHHHH----------------------HHHHHHHHHHHHcCCC------HHHCCEEEecCCchHHHHHH
Confidence 0000 00111110000 011111333332 222 48999999999999999999
Q ss_pred HHHc-----CCChhhH----hhhhhhhcccCCccCCchHHHHHHHHHhCCCCCCCEEEEEeechhHhhhheeeEeeccCC
Q 011007 402 QKNL-----QLSAEHV----EASRMTLHRFGNTSSSSLWYEMSYIEEKGRMKKGDRVWQIAFGSGFKCNSAVWKCNKTIK 472 (496)
Q Consensus 402 ~~~L-----gl~~e~~----~~S~~~l~r~GNtsSaSi~~~La~~~~~g~i~~Gd~Vll~~fG~G~~~~sav~r~~~~~~ 472 (496)
.+.+ +++++++ +||+..+++||||+|+|+|+.|++++++|++++||+|+++|||+|++++++++++...+.
T Consensus 244 ~~~l~~~~~~~~~e~~~~~~~~s~~~~~~~GN~~saSi~l~L~~~l~~~~l~~Gd~ill~s~GsG~~~~~~~~~v~~~~~ 323 (396)
T 1xpm_A 244 LESIIDNADETTQERLRSGYEDAVDYNRYVGNIYTGSLYLSLISLLENRDLQAGETIGLFSYGSGSVGEFYSATLVEGYK 323 (396)
T ss_dssp HHTTGGGSCHHHHHHHHHHHHHHTTGGGGTCCCGGGHHHHHHHHHHHHSCCCTTCEEEEEEEETTTEEEEEEEEECTTGG
T ss_pred HHHHHhhcccCCHHHHHHHhhhhhhhhhhcCchHHHHHHHHHHHHHHcCCCCCCCEEEEEEECcchhheEEEEEEcccHH
Confidence 9998 8887755 667777799999999999999999999999999999999999999999999999987654
No 40
>2wya_A Hydroxymethylglutaryl-COA synthase, mitochondrial; steroid biosynthesis, cholesterol biosynthesis, mitochondrion, phosphoprotein; HET: HMG; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.1e-40 Score=355.14 Aligned_cols=328 Identities=13% Similarity=0.165 Sum_probs=230.7
Q ss_pred CCCceEEEEeeeecCCCCcccChHHHHHHHhhhhcCCcchHHHHHHHHHHcCCCceeecCCCCcCCCCCCchHHHHHhHH
Q 011007 84 KPRHVYLVDYACYKPPVTCRVPFATFMEHSRLILKNNPKSVEFQMRILERSGLGEETCLPPAIHYIPPTPTMEAARGEAE 163 (496)
Q Consensus 84 ~~~~v~Iv~~~~y~P~~~~~v~~~~~~e~~~~~~~~~~~~~~f~~~i~~~sGi~~r~~~~~~~~~~~~~~~~~~~~~ea~ 163 (496)
-|++|+|.+++.|+|+ ++|+|+++.+..+. +++ ||.+++||++|++++++|. +.
T Consensus 2 m~~~VgI~~~g~y~P~--~~v~~~~l~~~~~~----~~~------~i~~~~Gi~~r~~~~~~E~--------------~~ 55 (460)
T 2wya_A 2 MPKDVGILALEVYFPA--QYVDQTDLEKYNNV----EAG------KYTVGLGQTRMGFCSVQED--------------IN 55 (460)
T ss_dssp CCSSCEEEEEEEECCS--EEEEHHHHHHHTTC----CTT------CCCCCCCCCEEECCCTTCC--------------HH
T ss_pred CCCceEEEEEEEECCC--eEEcHHHHHHHhCC----CHH------HHHHhhCcEEEEECCCCCC--------------HH
Confidence 4678999999999999 89999999987664 555 6888999999999998874 78
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEeec-cCCCCCCcHHHHHHHHcCC--CCCceeeEecCCCcchHHHHHHHHHHHHhc
Q 011007 164 LVIFSAMDSLLQKTGLKPKDIDILIVNC-SLFSPTPSLSAMVINKYKL--RSNIKSFNLSGMGCSAGLISIDLARDLLQV 240 (496)
Q Consensus 164 ~la~~Aa~~aL~~agi~p~dID~LI~~s-s~~~~~Ps~a~~I~~~Lgl--~~~~~~~dl~g~gCsg~l~al~lA~~lL~~ 240 (496)
+|++.|+++||+++|++|+|||+||++| |+++..|+.+++|+++||+ ..++.+||++ .+|+||+.||.+|.+++++
T Consensus 56 ~ma~~Aa~~al~~a~i~~~~Id~ii~aT~t~~~~~ps~a~~v~~~l~~~g~~~~~a~D~~-~aC~g~~~al~~A~~~i~~ 134 (460)
T 2wya_A 56 SLCLTVVQRLMERIQLPWDSVGRLEVGTETIIDKSKAVKTVLMELFQDSGNTDIEGIDTT-NACYGGTASLFNAANWMES 134 (460)
T ss_dssp HHHHHHHHHHHHHHTCCGGGEEEEEEECSCCSCSSSCHHHHHGGGTGGGTCCCCBCCEEE-SGGGHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCCchHHHHHHHHhccCCCCeeEechh-hhhhhHHHHHHHHHHHHHh
Confidence 9999999999999999999999999997 5789999999999999975 3478899999 5999999999999999999
Q ss_pred CCCCE--EEEEEECCCCCCCccCCCccccccccccccccEEEEEeccCCcccccceeEeeEEEEEecCCcccccceeecc
Q 011007 241 HPNSN--AVVVSTEIITPNYYQGNERAMLLPNCLFRMGGAAILLSNRRRNRSRAKYRLVHVVRTHKGADDKAYRCVFEEE 318 (496)
Q Consensus 241 ~~~~~--aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAaA~lLs~~~~~~~~~~~~L~~~~~t~~~~d~~~~~~~~~~~ 318 (496)
++.++ ++++.++. + +| .|++ +..+|||||+|++++..+... +. ........ .+ .++ .+.+.
T Consensus 135 g~~~~~lvvv~~s~~-~-~~---~d~~---~~~~~GdGA~A~l~~~~~~~~----~~-~~~~~~~~-~~--~~d-f~~p~ 197 (460)
T 2wya_A 135 SSWDGRYAMVVCGDI-A-VY---PSGN---ARPTGGAGAVAMLIGPKAPLA----LE-RGLRGTHM-EN--VYD-FYKPN 197 (460)
T ss_dssp TTCCSCEEEEEEEEE-E-CC---CSST---TGGGCEEEEEEEEEESSCSEE----EC-TTCCEEEE-CC--CCS-EECCC
T ss_pred ccccceEEEEEeccc-c-cc---cccc---ccccCcchHHhhhcccCCcce----ee-cccccccc-cc--hhh-hhccC
Confidence 98644 44444443 2 24 3554 356899999999999876421 00 00001111 11 111 12221
Q ss_pred cCCCceeeeechhHHHHHHHHhhhhhhhcCCCccchhHHHHHHHHHHHHhhhccccCCcccchhccccEEEeccCCHHHH
Q 011007 319 DKEGKVGISLSKDLMAIAGEALKSNITTIGPLVLPASEQLLFLMTLIGRKIFNPKWKPYIPDFKQAFEHFCIHAGGRAVI 398 (496)
Q Consensus 319 d~~G~~g~~ls~d~~~v~g~~l~~~i~~~gp~vlp~~e~~~~~~~~~~~~v~~~~~~~~~p~~~~did~f~~H~~~~~v~ 398 (496)
.... . |.+.|..........| .+-+.++...+. +..+..++. .+...+|+|+|++||++.+++
T Consensus 198 ~~s~---~------~~~dg~~s~~~~~~~g------~~v~~~~~~~~~-~~~~~~l~~-~~~~~~d~d~~v~Hqp~~r~~ 260 (460)
T 2wya_A 198 LASE---Y------PIVDGKLSIQCYLRAL------DRCYTSYRKKIQ-NQWKQAGSD-RPFTLDDLQYMIFHTPFCKMV 260 (460)
T ss_dssp TTCS---C------CEECHHHHHHHHHHHH------HHHHHHHHHHHH-HHHHHTTCC-CCCCGGGCSEEEECCSSHHHH
T ss_pred CCCC---C------cccCCccchHHHHHhh------HHHHHHHHHHHH-HHHHHHHHH-cCCCHHHHhhhhhcccchHHH
Confidence 1000 0 0000100000000000 111112221111 111112221 222358999999999999999
Q ss_pred HHHHHHcCCC----------------------------------------------hhhHhhhhhhhcccCCccCCchHH
Q 011007 399 DELQKNLQLS----------------------------------------------AEHVEASRMTLHRFGNTSSSSLWY 432 (496)
Q Consensus 399 ~~i~~~Lgl~----------------------------------------------~e~~~~S~~~l~r~GNtsSaSi~~ 432 (496)
+...++|+++ .+++++++.++++||||+|||+|+
T Consensus 261 ~k~~~rL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~~~~~~~GNt~sASipl 340 (460)
T 2wya_A 261 QKSLARLMFNDFLSASSDTQTSLYKGLEAFGGLKLEDTYTNKDLDKALLKASQDMFDKKTKASLYLSTHNGNMYTSSLYG 340 (460)
T ss_dssp HHHHHHHHHHHHHHSCHHHHHHHCGGGGGGTTCCGGGGGTCHHHHHHHHHHHHHHHHHHTGGGGHHHHHHCCCGGGHHHH
T ss_pred HHHHHHhcchhhhhcccchhhhhhhhhhhhcCCchhhhhhhhHHHHHHHHHHHHHhhcchhhhhhHHHhhCCcchhhHHH
Confidence 9888877543 235677889999999999999999
Q ss_pred HHHHHHHh--CCCCCCCEEEEEeechhHhhhheeeEeeccCC
Q 011007 433 EMSYIEEK--GRMKKGDRVWQIAFGSGFKCNSAVWKCNKTIK 472 (496)
Q Consensus 433 ~La~~~~~--g~i~~Gd~Vll~~fG~G~~~~sav~r~~~~~~ 472 (496)
.|+.++++ +++++||||+++|||+|+.+..+-++...+..
T Consensus 341 aL~~ll~~~~~~~~~GdrIll~~fGSGl~s~~fs~~v~~~~~ 382 (460)
T 2wya_A 341 CLASLLSHHSAQELAGSRIGAFSYGSGLAASFFSFRVSQDAA 382 (460)
T ss_dssp HHHHHHHHSCHHHHTTCEEEEEEEETTTEEEEEEEEECSCCS
T ss_pred HHHHHHHhccccCCCCCEEEEEEecCCccceEEEEEEeCCcc
Confidence 99998864 45679999999999999999988888876543
No 41
>3lma_A Stage V sporulation protein AD (spovad); NESG, structural genomics, PSI-2, protein structure initiative; 1.99A {Bacillus licheniformis} PDB: 3lm6_A
Probab=99.87 E-value=1.7e-21 Score=197.42 Aligned_cols=242 Identities=17% Similarity=0.195 Sum_probs=157.1
Q ss_pred hHHHHHHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCCceeeEecCCCcchHHHHHHHHHHHHhc
Q 011007 161 EAELVIFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLLQV 240 (496)
Q Consensus 161 ea~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL~~ 240 (496)
...+|+.+|+++||+++|++|+|||.||+++.+.+. ..++.++++||+ ++||++ .+|+|++.||.+|..++++
T Consensus 54 a~sdLa~~Aa~~AL~~AGi~~~DID~II~gt~t~q~--~~A~~va~~Lgi----pafdV~-~ACsg~~~AL~~Aa~~I~s 126 (347)
T 3lma_A 54 AERKLMEDAVQSALSKQNLKKEDIDIFLAGDLLNQN--VTANYVARHLKI----PFLCLF-GACSTSMESIAISSALIDG 126 (347)
T ss_dssp HHHHHHHHHHHHHHHTTTCCGGGCSEEEEEESSSSS--TTHHHHHHHHCC----CEEEBC-CSTTHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCch--hHHHHHHHHhCC----CEEEec-ChhHHHHHHHHHHHHHHhc
Confidence 368899999999999999999999999999765443 378999999964 599999 5999999999999999999
Q ss_pred CCCCEEEEEEECCCCCC---CccCCCc--cccccccccccccEEEEEeccCCcccccceeEeeEEEEEecCCccccccee
Q 011007 241 HPNSNAVVVSTEIITPN---YYQGNER--AMLLPNCLFRMGGAAILLSNRRRNRSRAKYRLVHVVRTHKGADDKAYRCVF 315 (496)
Q Consensus 241 ~~~~~aLVVs~E~~s~~---~~~~~dr--~~l~~~~lfgDGAaA~lLs~~~~~~~~~~~~L~~~~~t~~~~d~~~~~~~~ 315 (496)
+..++||||++|.+|.- +..+.+. ....+..+++|||+|+||++.+.. .++.+. +-++..+ +
T Consensus 127 G~~~~VLVVGaE~~S~aerq~r~p~e~g~q~p~ta~~t~dGAGA~VL~~~g~~-----p~I~~~------t~Gkvvd--~ 193 (347)
T 3lma_A 127 GFAKRALAATSSHNATAERQFRYPTEYGGQKPGTATSTVTGSGAVVLSQQPGG-----IKITSA------TVGRVID--L 193 (347)
T ss_dssp TSCSEEEEEEEECGGGTTCCC----------------CCCEEEEEEEESSCCS-----EEEEEE------ECCCCBC--C
T ss_pred CCCCEEEEEEeccccchhhhccCcchhcccCCchhcEEccceeEEEEEecCCC-----Cceeee------eeeeeec--c
Confidence 99999999999999851 1111111 112256788999999999965431 233221 1122211 0
Q ss_pred ecccCCCceeeeechhHHHHHHHHhhhhhhhcCCCccchhHHHHHHHHHHHHhhhc-cccCCcccchhccccEEE---ec
Q 011007 316 EEEDKEGKVGISLSKDLMAIAGEALKSNITTIGPLVLPASEQLLFLMTLIGRKIFN-PKWKPYIPDFKQAFEHFC---IH 391 (496)
Q Consensus 316 ~~~d~~G~~g~~ls~d~~~v~g~~l~~~i~~~gp~vlp~~e~~~~~~~~~~~~v~~-~~~~~~~p~~~~did~f~---~H 391 (496)
| . +|...... + .. |. ....+ .+.|+ ..++ ++|+|+++ +|
T Consensus 194 ------g---~---~d~~nmg~-a-------ma----Pa------A~~ti-~~~l~d~g~~------~~d~D~ivtgdL~ 236 (347)
T 3lma_A 194 ------G---I---TDSQDMGS-A-------MA----PA------AADTI-KQHLEDLGRT------PDDYDLILTGDLS 236 (347)
T ss_dssp ------S---C---CCTTCHHH-H-------HH----HH------HHHHH-HHHHHHHTCC------GGGCSEEEEESCH
T ss_pred ------C---C---CCCCCccc-c-------ch----HH------HHHHH-HHHHHHhCCC------HHHcCEEecCChH
Confidence 1 0 01000000 0 00 00 00001 12222 2233 48999999 78
Q ss_pred cCCHHHHHHHHHHcCCChhhHhhhhhhhcccCCccC--------CchHHHHHH-HHHhCCCCC--CCEEEEEeechhHhh
Q 011007 392 AGGRAVIDELQKNLQLSAEHVEASRMTLHRFGNTSS--------SSLWYEMSY-IEEKGRMKK--GDRVWQIAFGSGFKC 460 (496)
Q Consensus 392 ~~~~~v~~~i~~~Lgl~~e~~~~S~~~l~r~GNtsS--------aSi~~~La~-~~~~g~i~~--Gd~Vll~~fG~G~~~ 460 (496)
|.|+++++++.+++|++.++... -..+.-|+|..+ +.....|.- ++.+ +++ ..||+++++|++++=
T Consensus 237 q~g~~il~~l~~~~g~~~~~~~~-dcg~~iy~~~~~~~~ggsg~~csa~v~~~~~~~~--~~~g~~~ril~~~tGalls~ 313 (347)
T 3lma_A 237 GVGSPILKDLLKEEGINVGTKHN-DCGLMIYTPDQQVFAGGSGCACSAVVTFAHIFKE--IEAGRLNRVLVVATGALLSP 313 (347)
T ss_dssp HHHHHHHHHHHHHTTCCCGGGEE-EGGGTSSCC---------CCCCHHHHHHHTHHHH--HHTTSCSEEEEEEEEECCCH
T ss_pred HHHHHHHHHHHHHcCCChhHCcc-ccceEEecCCCcccCCCCccccHHHHHHHHHHHH--HhcCcccEEEEEecccccCc
Confidence 99999999999999999988731 115777888866 555555554 3332 333 369999999999875
Q ss_pred hh
Q 011007 461 NS 462 (496)
Q Consensus 461 ~s 462 (496)
.+
T Consensus 314 ~~ 315 (347)
T 3lma_A 314 TI 315 (347)
T ss_dssp HH
T ss_pred ch
Confidence 54
No 42
>4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile}
Probab=99.75 E-value=3.6e-17 Score=170.55 Aligned_cols=94 Identities=18% Similarity=0.252 Sum_probs=87.5
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEeecc-CCCCCCcHHHHHHHHcCCCCCceeeEecCCCcchHHHHHHHHHHHHhc
Q 011007 162 AELVIFSAMDSLLQKTGLKPKDIDILIVNCS-LFSPTPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLLQV 240 (496)
Q Consensus 162 a~~la~~Aa~~aL~~agi~p~dID~LI~~ss-~~~~~Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL~~ 240 (496)
+.+|+.+|++++|+++|++|+|||.+++++. ++...|..+..++.++|++.++++++++ .+|++++.||.+|..+|++
T Consensus 29 ~~~L~~~a~~~Al~~agi~~~~Id~v~~g~~~~~~~~~~~a~~~~~~lGl~~~~p~~~v~-~~Css~~~al~~A~~~I~~ 107 (395)
T 4e1l_A 29 AVQLGTIAVKEAISRVGLNLSEIDEVIIGNVLQTGLGQNVARQIAINAGIPNSVPSYTVN-KLCGSGLKSVQLAAQSITS 107 (395)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGCCEEEEECCCCSSTTCCHHHHHHHHTTCCTTSCEEEEC-CGGGHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCcchHHHHHHHHcCCCCCceEEEcc-ccchHHHHHHHHHHHHHhC
Confidence 6789999999999999999999999999875 4667789999999999998779999999 6999999999999999999
Q ss_pred CCCCEEEEEEECCCCC
Q 011007 241 HPNSNAVVVSTEIITP 256 (496)
Q Consensus 241 ~~~~~aLVVs~E~~s~ 256 (496)
|..++|||+++|.+|.
T Consensus 108 G~~~~vlv~g~e~~s~ 123 (395)
T 4e1l_A 108 GENDVVIAGGTENMSQ 123 (395)
T ss_dssp TSCSEEEEEEEEETTT
T ss_pred CCCCEEEEEEEecccC
Confidence 9999999999999875
No 43
>3ss6_A Acetyl-COA acetyltransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; HET: CSO; 1.70A {Bacillus anthracis}
Probab=99.74 E-value=3.5e-17 Score=170.67 Aligned_cols=94 Identities=13% Similarity=0.241 Sum_probs=87.3
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEeecc-CCCCCCcHHHHHHHHcCCCCCceeeEecCCCcchHHHHHHHHHHHHhc
Q 011007 162 AELVIFSAMDSLLQKTGLKPKDIDILIVNCS-LFSPTPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLLQV 240 (496)
Q Consensus 162 a~~la~~Aa~~aL~~agi~p~dID~LI~~ss-~~~~~Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL~~ 240 (496)
+.+|+.+|++++|+++|++|+|||.+++++. ++...|..+.+++.++|++.++++++++ .+|++++.||.+|..+|++
T Consensus 29 ~~~L~~~A~~~Al~~agl~~~~Id~v~~g~~~~~~~~~~~a~~i~~~lGl~~~~p~~~v~-~aCss~~~al~~A~~~I~~ 107 (394)
T 3ss6_A 29 PVELAVPVLQEAVKRGGVEPHEVDEVILGHCIQRTDEANTARTAALAAGFPDTVTGYTIQ-RQCSSGMQAIMSAAMQIQL 107 (394)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGCCEEEEECSSCCGGGCSHHHHHHHHTTCCTTCEEEEEE-CGGGHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCHhHCCEEEEEEccCCCccchHHHHHHHHcCCCCCceEEEec-CcchHHHHHHHHHHHHHhC
Confidence 6789999999999999999999999999875 4566788999999999998679999999 6999999999999999999
Q ss_pred CCCCEEEEEEECCCCC
Q 011007 241 HPNSNAVVVSTEIITP 256 (496)
Q Consensus 241 ~~~~~aLVVs~E~~s~ 256 (496)
|..++|||+++|.+|.
T Consensus 108 G~~~~vlv~G~e~~s~ 123 (394)
T 3ss6_A 108 GVSEVVVAGGVEAMSS 123 (394)
T ss_dssp TSCSEEEEEEEEECTT
T ss_pred CCCCEEEEEEEhhccC
Confidence 9999999999999875
No 44
>4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile}
Probab=99.72 E-value=7.3e-17 Score=168.36 Aligned_cols=94 Identities=14% Similarity=0.205 Sum_probs=88.2
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEeecc-CCCCCCcHHHHHHHHcCCCCCceeeEecCCCcchHHHHHHHHHHHHhc
Q 011007 162 AELVIFSAMDSLLQKTGLKPKDIDILIVNCS-LFSPTPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLLQV 240 (496)
Q Consensus 162 a~~la~~Aa~~aL~~agi~p~dID~LI~~ss-~~~~~Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL~~ 240 (496)
+.+|+.+|++++|+++|++|+|||.+|++++ +++..|..+.+|+.++|+++++++++++ .+|++++.||.+|..+|++
T Consensus 31 ~~~L~~~A~~~AL~~agl~~~dId~vi~g~~~~~~~~~~~a~~v~~~lGl~~~~p~~~v~-~aCss~~~al~~A~~~I~~ 109 (396)
T 4dd5_A 31 AVELGVTAAKEAIKRANITPDMIDESLLGGVLTAGLGQNIARQIALGAGIPVEKPAMTIN-IVCGSGLRSVSMASQLIAL 109 (396)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGCCEEEEECSCCTTSCSCHHHHHHHHTTCCTTSCEEEEC-CGGGHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeecCCCCCchHHHHHHHHcCCCCCceEEEec-cccHHHHHHHHHHHHHHhc
Confidence 6899999999999999999999999999875 5677899999999999998789999999 6999999999999999999
Q ss_pred CCCCEEEEEEECCCCC
Q 011007 241 HPNSNAVVVSTEIITP 256 (496)
Q Consensus 241 ~~~~~aLVVs~E~~s~ 256 (496)
|..++|||+++|.+|.
T Consensus 110 G~~~~vLv~g~e~~s~ 125 (396)
T 4dd5_A 110 GDADIMLVGGAENMSM 125 (396)
T ss_dssp TSCSEEEEEEEEESTT
T ss_pred CCCCEEEEEEEecccC
Confidence 9999999999999875
No 45
>3o04_A LMO2201 protein, beta-keto-acyl carrier protein synthase II; csgid, structural genomics; 1.85A {Listeria monocytogenes}
Probab=99.70 E-value=1.3e-15 Score=159.74 Aligned_cols=251 Identities=14% Similarity=0.121 Sum_probs=158.7
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcC----EEEeeccC------------------CCCCC---------cHHHHHHHHcCC
Q 011007 162 AELVIFSAMDSLLQKTGLKPKDID----ILIVNCSL------------------FSPTP---------SLSAMVINKYKL 210 (496)
Q Consensus 162 a~~la~~Aa~~aL~~agi~p~dID----~LI~~ss~------------------~~~~P---------s~a~~I~~~Lgl 210 (496)
...|+.+|+++||+++|+++++|| .|+++++. +...| ..+.+|+..||+
T Consensus 74 ~~~l~l~Aa~~AL~dAGl~~~~id~~~~gv~vgt~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl 153 (413)
T 3o04_A 74 FTHYAIASAEMAVQDSGLVIDDSNANRVGVWIGSGIGGMETFETQYEIFLNRGHRRVSPFFVPMMIPDMGSGQVSIRFGA 153 (413)
T ss_dssp HHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCTTTSCTTHHHHHSTTHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHcCCChhHcCccceEEEEccccCcHHHHHHHHHHHHhcCCCccCchhhhcccccHHHHHHHHHhCC
Confidence 678999999999999999999999 88888652 22233 248899999999
Q ss_pred CCCceeeEecCCCcchHHHHHHHHHHHHhcCCCCEEEEEEECCC---------------CCC------CccCCCcccccc
Q 011007 211 RSNIKSFNLSGMGCSAGLISIDLARDLLQVHPNSNAVVVSTEII---------------TPN------YYQGNERAMLLP 269 (496)
Q Consensus 211 ~~~~~~~dl~g~gCsg~l~al~lA~~lL~~~~~~~aLVVs~E~~---------------s~~------~~~~~dr~~l~~ 269 (496)
+. ++++++ .+|++++.||..|.++|++|..+.|||+++|.. +.+ ..+..++. .
T Consensus 154 ~g--p~~~v~-~aCss~~~Al~~A~~~I~~G~~d~~lvgG~e~~~~~~~~~~~~~~~~ls~~~~p~~~~~pfd~~~---~ 227 (413)
T 3o04_A 154 KG--INSTTV-TACATATNSIGDAFKVIERGDADAMITGGAEAPITKMSLAGFTANKALSLNPDPETACRPFDKDR---D 227 (413)
T ss_dssp CS--CEECCC-CGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCCCTTTSCCTTBTTC---C
T ss_pred CC--cceeec-chhHHHHHHHHHHHHHHHcCCCCEEEEeEEcccCCHHHHHHHHhcccccCCCCCCCCcCCCcCCC---C
Confidence 73 899999 699999999999999999999999999999982 210 00011111 3
Q ss_pred ccccccccEEEEEeccCCcccc--cceeEeeEEEEEecCCcccccceeecccCCCceeeeechhHHHHHHHHhhhhhhhc
Q 011007 270 NCLFRMGGAAILLSNRRRNRSR--AKYRLVHVVRTHKGADDKAYRCVFEEEDKEGKVGISLSKDLMAIAGEALKSNITTI 347 (496)
Q Consensus 270 ~~lfgDGAaA~lLs~~~~~~~~--~~~~L~~~~~t~~~~d~~~~~~~~~~~d~~G~~g~~ls~d~~~v~g~~l~~~i~~~ 347 (496)
.+++||||+|+||++.+..+++ ..|- .+..+....|+... ..+. |. +..
T Consensus 228 g~~~gdGAaavvL~~~~~A~~~g~~i~a--~i~g~~~~~dg~~~---~~~~--------------~~--~~~-------- 278 (413)
T 3o04_A 228 GFIIGEGAGIVILEEYEHAKARGAKIYA--EIVGYGATGDAYHI---TAPA--------------PN--GEG-------- 278 (413)
T ss_dssp SBCBBCEEEEEEEEEHHHHHHHTCCCCE--EEEEEEEEECCSCS---SSCC--------------GG--GHH--------
T ss_pred CceEeccEEEEEEeeHHHHHhCCCeEEE--EEEEEEEcCCCCCC---CCCC--------------CC--HHH--------
Confidence 5789999999999975421110 0111 12222222333210 1000 00 000
Q ss_pred CCCccchhHHHHHHHHHHHHhhhcc-ccCCcccchhccccEEEeccCCHHHHHHH-----HHHcCCChhhHhhhhhhhcc
Q 011007 348 GPLVLPASEQLLFLMTLIGRKIFNP-KWKPYIPDFKQAFEHFCIHAGGRAVIDEL-----QKNLQLSAEHVEASRMTLHR 421 (496)
Q Consensus 348 gp~vlp~~e~~~~~~~~~~~~v~~~-~~~~~~p~~~~did~f~~H~~~~~v~~~i-----~~~Lgl~~e~~~~S~~~l~r 421 (496)
.....++.++. .+. .+|||++.+|..+...-|.+ .+.++...+++.. -..-..
T Consensus 279 --------------~~~a~~~al~~agl~------~~dId~ve~HgtgT~~~d~~e~~al~~~~~~~~~~~~v-~s~k~~ 337 (413)
T 3o04_A 279 --------------AARAMKMAIDDAGLT------PDKVDYINAHGTSTPYNDEYETQAIKTVFGEHAKKLAI-SSTKSM 337 (413)
T ss_dssp --------------HHHHHHHHHHHHTCC------GGGCCEEECCCCCCHHHHHHHHHHHHHHHGGGTTTSEE-ECTHHH
T ss_pred --------------HHHHHHHHHHHcCCC------HHHcCEEEEeCCcCcccCHHHHHHHHHHhcccCCCCce-eccccc
Confidence 00112334432 343 38999999999887765544 3444443333321 123345
Q ss_pred cCCccCCchHHHHHHH---HHhCCC------------------------CCCCEEEEEeechhHhhhheeeEee
Q 011007 422 FGNTSSSSLWYEMSYI---EEKGRM------------------------KKGDRVWQIAFGSGFKCNSAVWKCN 468 (496)
Q Consensus 422 ~GNtsSaSi~~~La~~---~~~g~i------------------------~~Gd~Vll~~fG~G~~~~sav~r~~ 468 (496)
+||+.+|+=...+... ++++.+ .+..+++.-+||.|-+..++|++..
T Consensus 338 ~GH~~gAsG~~~~~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sfgfgG~na~~vl~~~ 411 (413)
T 3o04_A 338 TGHTLGASGGIEAIFALLTIRDNIIAPTIHLKNQDEVCDLDYVPNEAREANVNVVISNSFGFGGHNATLVFKRI 411 (413)
T ss_dssp HCBCGGGHHHHHHHHHHHHHHHTEECCBTTCCSBCSSCCSCCCBSSCEECCCCEEEEEEEETTTEEEEEEEECC
T ss_pred ccccHHHHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCCcccCCCcccCCCCCEEEEeCccCCceEEEEEEEeC
Confidence 7999998866665543 333321 1235677789999988888888753
No 46
>1tqy_A Beta-ketoacyl synthase/acyl transferase; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1
Probab=99.70 E-value=1.4e-15 Score=159.99 Aligned_cols=252 Identities=14% Similarity=0.116 Sum_probs=163.1
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcC----EEEeeccC-CC---------------------------CCCcH-HH----HH
Q 011007 162 AELVIFSAMDSLLQKTGLKPKDID----ILIVNCSL-FS---------------------------PTPSL-SA----MV 204 (496)
Q Consensus 162 a~~la~~Aa~~aL~~agi~p~dID----~LI~~ss~-~~---------------------------~~Ps~-a~----~I 204 (496)
..+|+.+|++++|+++|+++++|| .|+++++. ++ ..|+. +. +|
T Consensus 73 ~~~l~l~aa~~AL~dAG~~~~~i~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i 152 (424)
T 1tqy_A 73 ASQFAVACAREAFAASGLDPDTLDPARVGVSLGSAVAAATSLEREYLLLSDSGRDWEVDAAWLSRHMFDYLVPSVMPAEV 152 (424)
T ss_dssp HHHHHHHHHHHHHHHHTCCTTTCCGGGEEEEEECSSTTHHHHHHHHHHHHTTTTCSSCCGGGCCTTTHHHHSTTHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCCchhcCCCceEEEEEeCCccHHHHHHHHHHHhhhccCccccChhhhcccccccccchhHhHH
Confidence 678999999999999999999999 57776542 21 12333 34 99
Q ss_pred HHHcCCCCCceeeEecCCCcchHHHHHHHHHHHHhcCCCCEEEEEEECCC-CCC---------CccC-----------CC
Q 011007 205 INKYKLRSNIKSFNLSGMGCSAGLISIDLARDLLQVHPNSNAVVVSTEII-TPN---------YYQG-----------NE 263 (496)
Q Consensus 205 ~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL~~~~~~~aLVVs~E~~-s~~---------~~~~-----------~d 263 (496)
+..||++. ++++++ .+|++++.||..|.++|++|..+.|||+++|.. +.. .... -|
T Consensus 153 a~~lgl~g--p~~~v~-~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~ls~~~~~p~~~~rpfd 229 (424)
T 1tqy_A 153 AWAVGAEG--PVTMVS-TGCTSGLDSVGNAVRAIEEGSADVMFAGAADTPITPIVVACFDAIRATTARNDDPEHASRPFD 229 (424)
T ss_dssp HHHHTCCS--CEEEEC-CGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCCSCGGGCCCTTB
T ss_pred HHhcCCCC--ceEeec-CcccHHHHHHHHHHHHHHCCCCCEEEEeeecccCCHHHHHHHHhhccccCCCCCCCCCccCCC
Confidence 99999973 899999 699999999999999999999999999999984 220 0000 01
Q ss_pred ccccccccccccccEEEEEeccCCcccc--cceeEeeEEEEEecCCcccccceeecccCCCceeeeechhHHHHHHHHhh
Q 011007 264 RAMLLPNCLFRMGGAAILLSNRRRNRSR--AKYRLVHVVRTHKGADDKAYRCVFEEEDKEGKVGISLSKDLMAIAGEALK 341 (496)
Q Consensus 264 r~~l~~~~lfgDGAaA~lLs~~~~~~~~--~~~~L~~~~~t~~~~d~~~~~~~~~~~d~~G~~g~~ls~d~~~v~g~~l~ 341 (496)
+. -..+++||||+|+||++.+.-.++ ..|- .+..+....|+... ..+. .+| ..
T Consensus 230 ~~--~~G~v~geGaaavvL~~~~~A~~~g~~i~a--~I~g~~~~~dg~~~---~~p~-~~g---------------~~-- 284 (424)
T 1tqy_A 230 GT--RDGFVLAEGAAMFVLEDYDSALARGARIHA--EISGYATRCNAYHM---TGLK-ADG---------------RE-- 284 (424)
T ss_dssp TT--CCCBCEECEEEEEEEEEHHHHHHTTCCCCE--EEEEEEEEECSSCS---SCCC-TTC---------------HH--
T ss_pred CC--CCceeeecceeEEEeccHHHHHhCCCcEEE--EEeeeEEcCCCCCC---CCCC-CCH---------------HH--
Confidence 10 135789999999999875421111 1111 12222223333221 1110 000 00
Q ss_pred hhhhhcCCCccchhHHHHHHHHHHHHhhhcc-ccCCcccchhccccEEEeccCCHHHHH-----HHHHHcCCChhhHhhh
Q 011007 342 SNITTIGPLVLPASEQLLFLMTLIGRKIFNP-KWKPYIPDFKQAFEHFCIHAGGRAVID-----ELQKNLQLSAEHVEAS 415 (496)
Q Consensus 342 ~~i~~~gp~vlp~~e~~~~~~~~~~~~v~~~-~~~~~~p~~~~did~f~~H~~~~~v~~-----~i~~~Lgl~~e~~~~S 415 (496)
+ ....++.++. .+. .+|||++..|+.+..+-| .+.+.++...+++.-
T Consensus 285 ---------------~-----~~ai~~al~~agl~------~~dId~ve~Hgtgt~~gD~~E~~al~~~f~~~~~~~~v- 337 (424)
T 1tqy_A 285 ---------------M-----AETIRVALDESRTD------ATDIDYINAHGSGTRQNDRHETAAYKRALGEHARRTPV- 337 (424)
T ss_dssp ---------------H-----HHHHHHHHHHHTCC------GGGCCEEECCCCCCHHHHHHHHHHHHHHTGGGGGGSCE-
T ss_pred ---------------H-----HHHHHHHHHHcCCC------HHHCCEEEecCccCcCcCHHHHHHHHHHhcccCCCCee-
Confidence 0 0011333332 333 389999999999977543 445566654444421
Q ss_pred hhhhcccCCccCCchHHHHHH---HHHhCCCC------------------------CCCEEEEEeechhHhhhheeeEee
Q 011007 416 RMTLHRFGNTSSSSLWYEMSY---IEEKGRMK------------------------KGDRVWQIAFGSGFKCNSAVWKCN 468 (496)
Q Consensus 416 ~~~l~r~GNtsSaSi~~~La~---~~~~g~i~------------------------~Gd~Vll~~fG~G~~~~sav~r~~ 468 (496)
-.+-..+||+.+|+-...|.. .++++.+. +.++++.-+||.|-+..++|++..
T Consensus 338 ~s~k~~~GH~~~AaG~~~l~~~~l~l~~~~ipp~~~~~~~~p~~~~~~v~~~~~~~~~~~a~~~sfG~GG~n~~~vl~~~ 417 (424)
T 1tqy_A 338 SSIKSMVGHSLGAIGSLEIAACVLALEHGVVPPTANLRTSDPECDLDYVPLEARERKLRSVLTVGSGFGGFQSAMVLRDA 417 (424)
T ss_dssp ECTHHHHCBCTTTHHHHHHHHHHHHHHHCEECCBTTCCSBBTTBCSCCCBSSCEECCCSEEEEEEEETTTEEEEEEEECH
T ss_pred eccccccccChhhhHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCCcccCCCcccCCCCCEEEEccccCCceEEEEEEccC
Confidence 122456899999998888776 44555432 467899999999999999998864
No 47
>2gqd_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; duplicated babababb fold, transferase; 2.30A {Staphylococcus aureus}
Probab=99.69 E-value=1.3e-15 Score=160.87 Aligned_cols=321 Identities=12% Similarity=0.079 Sum_probs=188.9
Q ss_pred hcCCCceEEEEeeeecCCCCcccChHHHHHHHhhhhcCCcchHHHHHHHHHHcCCCceeecC-CCC---cCCCCCCchHH
Q 011007 82 MSKPRHVYLVDYACYKPPVTCRVPFATFMEHSRLILKNNPKSVEFQMRILERSGLGEETCLP-PAI---HYIPPTPTMEA 157 (496)
Q Consensus 82 ~~~~~~v~Iv~~~~y~P~~~~~v~~~~~~e~~~~~~~~~~~~~~f~~~i~~~sGi~~r~~~~-~~~---~~~~~~~~~~~ 157 (496)
|+..++|.|+++||..|.. .+.+++.+.+.. +.-.-..+ .+ ++..++..+.... ++. ...++. ...
T Consensus 24 m~~~~~vaI~G~g~~~P~g---~~~~~~w~~l~~-g~~~i~~~---~~-~~~~~~~~~~~~~i~~fd~~~~~~~~--~~~ 93 (437)
T 2gqd_A 24 MSQNKRVVITGMGALSPIG---NDVKTTWENALK-GVNGIDKI---TR-IDTEPYSVHLAGELKNFNIEDHIDKK--EAR 93 (437)
T ss_dssp ---CCCEEEEEEEEEBTTB---SSHHHHHHHHHT-TCCCEEEC---CS-SCCTTSSCCEEECCSSCCGGGTSCST--TTT
T ss_pred ccCCCCEEEEEeeEECCCC---CCHHHHHHHHHc-CCCceeeC---Cc-cccccCccceeEEeCCCChhcCCCHH--HHH
Confidence 3333679999999999983 577888776542 11000000 00 0001111111110 000 001110 011
Q ss_pred HHHhHHHHHHHHHHHHHHHcCCCcCCcC----EEEeeccC-C-----------------CC---------CCcHHHHHHH
Q 011007 158 ARGEAELVIFSAMDSLLQKTGLKPKDID----ILIVNCSL-F-----------------SP---------TPSLSAMVIN 206 (496)
Q Consensus 158 ~~~ea~~la~~Aa~~aL~~agi~p~dID----~LI~~ss~-~-----------------~~---------~Ps~a~~I~~ 206 (496)
......+|+.+|++++|+++|+++++|| .|+++++. + .. .+..+.+|+.
T Consensus 94 ~~d~~~~l~l~aa~~AL~dAGl~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~ 173 (437)
T 2gqd_A 94 RMDRFTQYAIVAAREAVKDAQLDINENTADRIGVWIGSGIGGMETFEIAHKQLMDKGPRRVSPFFVPMLIPDMATGQVSI 173 (437)
T ss_dssp TSCHHHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHH
T ss_pred hcCHHHHHHHHHHHHHHHHcCCCccccCCcceEEEEeecCCcHHHHHHHHHHHHhcCcccCChHHhhhcchhHHHHHHHH
Confidence 1123678999999999999999999999 88887653 2 11 2357899999
Q ss_pred HcCCCCCceeeEecCCCcchHHHHHHHHHHHHhcCCCCEEEEEEECCC-CCC-------------------CccCCCccc
Q 011007 207 KYKLRSNIKSFNLSGMGCSAGLISIDLARDLLQVHPNSNAVVVSTEII-TPN-------------------YYQGNERAM 266 (496)
Q Consensus 207 ~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL~~~~~~~aLVVs~E~~-s~~-------------------~~~~~dr~~ 266 (496)
.||++. ++++++ .+|++++.||..|.++|++|..+.|||+++|.. +.. ...+-|+.
T Consensus 174 ~lgl~g--p~~~v~-~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~ls~~~~p~~~~~pfd~~- 249 (437)
T 2gqd_A 174 DLGAKG--PNGATV-TACATGTNSIGEAFKIVQRGDADAMITGGTEAPITHMAIAGFSASRALSTNDDIETACRPFQEG- 249 (437)
T ss_dssp HHTCCS--SEECBC-CGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCCCTTTSSCTTCTT-
T ss_pred HhCCCC--ceEEec-CCccHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHhccCccCCCCCccccCCCCCC-
Confidence 999973 899999 699999999999999999999999999999974 210 00011111
Q ss_pred cccccccccccEEEEEeccCCcccc--cceeEeeEEEEEecCCcccccceeecccCCCceeeeechhHHHHHHHHhhhhh
Q 011007 267 LLPNCLFRMGGAAILLSNRRRNRSR--AKYRLVHVVRTHKGADDKAYRCVFEEEDKEGKVGISLSKDLMAIAGEALKSNI 344 (496)
Q Consensus 267 l~~~~lfgDGAaA~lLs~~~~~~~~--~~~~L~~~~~t~~~~d~~~~~~~~~~~d~~G~~g~~ls~d~~~v~g~~l~~~i 344 (496)
-..+++||||+|+||++.+...++ ..|- .+..+....|+.. +..+. | .+...
T Consensus 250 -~~G~v~geGaaavvL~~~~~A~~~g~~i~a--~I~g~~~~~dg~~---~~~p~--------------~--~~~~~---- 303 (437)
T 2gqd_A 250 -RDGFVMGEGAGILVIESLESAQARGANIYA--EIVGYGTTGDAYH---ITAPA--------------P--EGEGG---- 303 (437)
T ss_dssp -CCSBCBBCEEEEEEEEEHHHHHHHTCCCCE--EEEEEEEEECCSC---SSSCC--------------G--GGHHH----
T ss_pred -CCCceeeceEEEEEECcHHHHHhCCCceEE--EEEEEEecCCCCC---CCCCC--------------C--CHHHH----
Confidence 136799999999999875421111 1111 1222233334321 11110 0 00000
Q ss_pred hhcCCCccchhHHHHHHHHHHHHhhhcc-ccCCcccchhccccEEEeccCCHHHHH-----HHHHHcCCChhhHhhhhhh
Q 011007 345 TTIGPLVLPASEQLLFLMTLIGRKIFNP-KWKPYIPDFKQAFEHFCIHAGGRAVID-----ELQKNLQLSAEHVEASRMT 418 (496)
Q Consensus 345 ~~~gp~vlp~~e~~~~~~~~~~~~v~~~-~~~~~~p~~~~did~f~~H~~~~~v~~-----~i~~~Lgl~~e~~~~S~~~ 418 (496)
....++.++. .+. .+|||++.+|+.+..+-| .+.+.+|...+++.- -.+
T Consensus 304 ------------------~~ai~~Al~~Agl~------p~dId~ve~HgtgT~~~D~~E~~al~~~fg~~~~~~~v-~s~ 358 (437)
T 2gqd_A 304 ------------------SRAMQAAMDDAGIE------PKDVQYLNAHGTSTPVGDLNEVKAIKNTFGEAAKHLKV-SST 358 (437)
T ss_dssp ------------------HHHHHHHHHHHTCC------GGGCCEEECCCCSCHHHHHHHHHHHHHHHGGGGTSCEE-ECT
T ss_pred ------------------HHHHHHHHHHcCCC------HhhCCEEEEECCCCcCcCHHHHHHHHHHHhccCCCcee-ecc
Confidence 0011333332 333 389999999999988654 345666654444321 122
Q ss_pred hcccCCccCCchHHHHHHH---HHhCCC------------------------CCCCEEEEEeechhHhhhheeeEe
Q 011007 419 LHRFGNTSSSSLWYEMSYI---EEKGRM------------------------KKGDRVWQIAFGSGFKCNSAVWKC 467 (496)
Q Consensus 419 l~r~GNtsSaSi~~~La~~---~~~g~i------------------------~~Gd~Vll~~fG~G~~~~sav~r~ 467 (496)
-..+||+.+|+-...+... ++.+.+ .+..+++.-+||.|-+..++|++.
T Consensus 359 k~~~GH~~gAaG~~~li~~~l~l~~~~ipp~~~~~~~~p~~~~~~v~~~~~~~~~~~a~~~sfGfGG~na~~vl~~ 434 (437)
T 2gqd_A 359 KSMTGHLLGATGGIEAIFSALSIKDSKVAPTIHAVTPDPECDLDIVPNEAQDLDITYAMSNSLGFGGHNAVLVFKK 434 (437)
T ss_dssp HHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCCSCCSSCCSBCCBSSCEECCCSEEEEEEECGGGEEEEEEEEC
T ss_pred hhhhcCChhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCcccCCCccccCCCCEEEEccCcCCCeeEEEEEEe
Confidence 4558999999877776653 333332 134677888999998877777764
No 48
>3ho9_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, platensimycin, platencin A1, KAS2, acyltransferase, fatty acid biosynthesis; HET: N3A; 1.90A {Escherichia coli} PDB: 3hnz_A* 3ho2_A* 3i8p_A* 3g11_A* 2gfx_A* 3g0y_A* 2gfv_A* 2gfw_A 2gfy_A* 1kas_A 1b3n_A
Probab=99.68 E-value=1.8e-15 Score=159.30 Aligned_cols=318 Identities=14% Similarity=0.103 Sum_probs=192.8
Q ss_pred cCCCceEEEEeeeecCCCCcccChHHHHHHHhhhhc--CCcchHHHHHHHHHHcCCCceeec-CCCCcCCCCCCchHHHH
Q 011007 83 SKPRHVYLVDYACYKPPVTCRVPFATFMEHSRLILK--NNPKSVEFQMRILERSGLGEETCL-PPAIHYIPPTPTMEAAR 159 (496)
Q Consensus 83 ~~~~~v~Iv~~~~y~P~~~~~v~~~~~~e~~~~~~~--~~~~~~~f~~~i~~~sGi~~r~~~-~~~~~~~~~~~~~~~~~ 159 (496)
...++|.|+|+||..|.. .+.+++.+.+.. +. +.+-. + ++..+...+.-. -++.. ...-.+-.+++
T Consensus 15 ~~~~~v~I~G~g~~~p~g---~~~~~~w~~l~~-g~~~i~~~~-~-----~~~~~~~~~~~~~v~~fd-~~~~i~~~~~~ 83 (427)
T 3ho9_A 15 VSKRRVVVTGLGMLSPVG---NTVESTWKALLA-GQSGISLID-H-----FDTSAYATKFAGLVKDFN-CEDIISRKEQR 83 (427)
T ss_dssp --CCCEEEEEEEEEBTTB---SSHHHHHHHHHT-TCCCEEECC-S-----SCCTTCSCCEEECCSSCC-CTTTSCHHHHT
T ss_pred CCCCCEEEEeeeEECCCC---CCHHHHHHHHHc-CCCceeeCC-c-----cccccCccceeeEcCCCC-hhhcCCHHHHh
Confidence 345679999999999983 577888876542 11 00000 0 000111111100 00000 00001111111
Q ss_pred --HhHHHHHHHHHHHHHHHcCCCcCCcC----EEEeeccC---------------------------CCCCCcHHHHHHH
Q 011007 160 --GEAELVIFSAMDSLLQKTGLKPKDID----ILIVNCSL---------------------------FSPTPSLSAMVIN 206 (496)
Q Consensus 160 --~ea~~la~~Aa~~aL~~agi~p~dID----~LI~~ss~---------------------------~~~~Ps~a~~I~~ 206 (496)
.....|+.+|++++|+++|+++++|| .+++.++. .+..+..+.+|+.
T Consensus 84 ~~d~~~~l~l~aa~~AL~dAGl~~~~i~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~ 163 (427)
T 3ho9_A 84 KMDAFIQYGIVAGVQAMQDSGLEITEENATRIGAAIGSGIGGLGLIEENHTSLMNGGPRKISPFFVPSTIVNMVAGHLTI 163 (427)
T ss_dssp TSCHHHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHH
T ss_pred hCCHHHHHHHHHHHHHHHHCCCCcccccccceEEEEccccccHHHHHHHHHHHHhcCccccCcceeccccchHHHHHHHH
Confidence 22678999999999999999999999 47766542 1224467899999
Q ss_pred HcCCCCCceeeEecCCCcchHHHHHHHHHHHHhcCCCCEEEEEEECCCCCCC----------------------ccCCCc
Q 011007 207 KYKLRSNIKSFNLSGMGCSAGLISIDLARDLLQVHPNSNAVVVSTEIITPNY----------------------YQGNER 264 (496)
Q Consensus 207 ~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL~~~~~~~aLVVs~E~~s~~~----------------------~~~~dr 264 (496)
.||++. ++++++ .+|++++.||..|.++|++|..+.|||+++|.++..+ .+..++
T Consensus 164 ~lgl~G--p~~~v~-taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~p~~~~~~~~~~~ls~~~~~~~~~~~pfd~~ 240 (427)
T 3ho9_A 164 MYGLRG--PSISIA-TAATSGVHNIGHAARIIAYGDADVMVAGGAEKASTPLGVGGFGAARALSTRNDNPQAASRPWDKE 240 (427)
T ss_dssp HHTCCS--CEECCC-CGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCTTCHHHHCCTTBTT
T ss_pred HhCCCC--Ceeccc-chhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHhccCcccCCCCCCcccCCccCC
Confidence 999973 799999 6999999999999999999999999999999985210 000111
Q ss_pred cccccccccccccEEEEEeccCCcccc--cceeEeeEEEEEecCCcccccceeecccCCCceeeeechhHHHHHHHHhhh
Q 011007 265 AMLLPNCLFRMGGAAILLSNRRRNRSR--AKYRLVHVVRTHKGADDKAYRCVFEEEDKEGKVGISLSKDLMAIAGEALKS 342 (496)
Q Consensus 265 ~~l~~~~lfgDGAaA~lLs~~~~~~~~--~~~~L~~~~~t~~~~d~~~~~~~~~~~d~~G~~g~~ls~d~~~v~g~~l~~ 342 (496)
. ..+++||||+|+||++.+..+++ ..|- .+..+....|+... ..+.. .+ .+
T Consensus 241 ~---~G~v~geGAaavvL~~~~~A~~~g~~i~a--~i~g~~~~~dg~~~---~~p~~-~~-------------~~----- 293 (427)
T 3ho9_A 241 R---DGFVLGDGAGMLVLEEYEHAKKRGAKIYA--ELVGFGMSSDAYHM---TSPPE-NG-------------AG----- 293 (427)
T ss_dssp C---CSBCBBCEEEEEEEEEHHHHHHTTCCCCE--EEEEEEEEECCSBT---TBCCT-TC-------------HH-----
T ss_pred C---CCceeeeeEEEEEEccHHHHHHCCCcEEE--EEEEEeecCCCCCc---CCCCC-CH-------------HH-----
Confidence 1 35789999999999975421111 1111 12222223333211 11100 00 00
Q ss_pred hhhhcCCCccchhHHHHHHHHHHHHhhhcc-ccCCcccchhccccEEEec-----cCCHHHHHHHHHHcCCChhhHhhhh
Q 011007 343 NITTIGPLVLPASEQLLFLMTLIGRKIFNP-KWKPYIPDFKQAFEHFCIH-----AGGRAVIDELQKNLQLSAEHVEASR 416 (496)
Q Consensus 343 ~i~~~gp~vlp~~e~~~~~~~~~~~~v~~~-~~~~~~p~~~~did~f~~H-----~~~~~v~~~i~~~Lgl~~e~~~~S~ 416 (496)
+ ....++.++. .+. .+|||++.+| ++.......+.+.++.+.+++.. .
T Consensus 294 --------------~-----~~ai~~al~~Agl~------~~dId~ve~HgtgT~~~d~~e~~a~~~~~g~~~~~~~v-~ 347 (427)
T 3ho9_A 294 --------------A-----ALAMANALRDAGIE------ASQIGYVNAHGTSTPAGDKAEAQAVKTIFGEAASRVLV-S 347 (427)
T ss_dssp --------------H-----HHHHHHHHHHHTCC------GGGCCEEECCCCSCHHHHHHHHHHHHHHHGGGGGTSEE-E
T ss_pred --------------H-----HHHHHHHHHHcCCC------HHHccEEEecCCcCCCcCHHHHHHHHHHhcccCCCeEE-e
Confidence 0 0111334432 343 3899999999 77778888889999887666532 2
Q ss_pred hhhcccCCccCCchHHHHHHH---HHhCCC-------------------------CCCCEEEEEeechhHhhhheeeEe
Q 011007 417 MTLHRFGNTSSSSLWYEMSYI---EEKGRM-------------------------KKGDRVWQIAFGSGFKCNSAVWKC 467 (496)
Q Consensus 417 ~~l~r~GNtsSaSi~~~La~~---~~~g~i-------------------------~~Gd~Vll~~fG~G~~~~sav~r~ 467 (496)
.....+||+.+|+=...+..+ ++++.+ .+.++++.-+||.|-+..++|++.
T Consensus 348 s~k~~~GH~~gAsG~~~~i~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~sfGfgG~na~~vl~~ 426 (427)
T 3ho9_A 348 STKSMTGHLLGAAGAVESIYSILALRDQAVPPTINLDNPDEGCDLDFVPHEARQVSGMEYTLCNSFGFGGTNGSLIFKK 426 (427)
T ss_dssp CTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCSSBCTTCCCBCCBSSCEECSSCCEEEEEEEETTTEEEEEEEEC
T ss_pred cchHhhccCHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCccccccccccCCCCCEEEEeCccCCceeEEEEEEe
Confidence 345569999999866555543 333321 145678889999998888888763
No 49
>1j3n_A 3-oxoacyl-(acyl-carrier protein) synthase II; condensing enzymes, fatty acid elongation, acyl-carrier protein (ACP); HET: CIT; 2.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1
Probab=99.66 E-value=2.6e-15 Score=157.01 Aligned_cols=250 Identities=18% Similarity=0.177 Sum_probs=162.9
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCE----EEeeccC-CC-----------------C--------CC-cHHHHHHHHcCC
Q 011007 162 AELVIFSAMDSLLQKTGLKPKDIDI----LIVNCSL-FS-----------------P--------TP-SLSAMVINKYKL 210 (496)
Q Consensus 162 a~~la~~Aa~~aL~~agi~p~dID~----LI~~ss~-~~-----------------~--------~P-s~a~~I~~~Lgl 210 (496)
..+|+.+|++++|+++|+++++||. +++.++. ++ . .| ..+.+|+.+||+
T Consensus 71 ~~~l~~~aa~~AL~dAGl~~~~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl 150 (408)
T 1j3n_A 71 FVQYALIAAQLALEDAGLKPEDLDPERVGTLVGTGIGGMETWEAQSRVFLERGPNRISPFFIPMMIANMASAHIAMRYGF 150 (408)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGSCGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHcCCCccccCCCceEEEEEecCCcHHHHHHHHHHHHhcCcccCChhhhhhhhhhHHHHHHHHHhCC
Confidence 6889999999999999999999994 5555432 21 1 23 578899999999
Q ss_pred CCCceeeEecCCCcchHHHHHHHHHHHHhcCCCCEEEEEEECCC-CCC---------Ccc-----------CCCcccccc
Q 011007 211 RSNIKSFNLSGMGCSAGLISIDLARDLLQVHPNSNAVVVSTEII-TPN---------YYQ-----------GNERAMLLP 269 (496)
Q Consensus 211 ~~~~~~~dl~g~gCsg~l~al~lA~~lL~~~~~~~aLVVs~E~~-s~~---------~~~-----------~~dr~~l~~ 269 (496)
+. ++++++ .+|++++.||..|.++|++|..+.|||+++|.. +.. ... +-|+. -.
T Consensus 151 ~g--p~~~v~-~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~ls~~~~~p~~~~~pfd~~--~d 225 (408)
T 1j3n_A 151 TG--PSSTVV-TACATGADALGSALRMIQLGEADLVLAGGTEAAITPMAIGAFAVMRALSTRNEEPEKASRPFTLS--RD 225 (408)
T ss_dssp CS--CBCCBC-CGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCTTCHHHHCCTTBTT--CC
T ss_pred CC--ceeCcc-CchHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHhcccccCCCCCCCcCcccCcCC--CC
Confidence 73 899999 699999999999999999999999999999974 320 011 00111 13
Q ss_pred ccccccccEEEEEeccCCcccc--cceeEeeEEEEEecCCcccccceeecccCCCceeeeechhHHHHHHHHhhhhhhhc
Q 011007 270 NCLFRMGGAAILLSNRRRNRSR--AKYRLVHVVRTHKGADDKAYRCVFEEEDKEGKVGISLSKDLMAIAGEALKSNITTI 347 (496)
Q Consensus 270 ~~lfgDGAaA~lLs~~~~~~~~--~~~~L~~~~~t~~~~d~~~~~~~~~~~d~~G~~g~~ls~d~~~v~g~~l~~~i~~~ 347 (496)
.+++||||+|+||++.+...++ ..|- .+..+....|+... ..+. .++ ..
T Consensus 226 g~v~geGaaavvL~~~~~A~~~g~~i~a--~i~g~~~~~d~~~~---~~p~-~~~---------------~~-------- 276 (408)
T 1j3n_A 226 GFVMGEGAGVLVLEAYEHAKKRGARIYA--ELVGFGRSADAHHI---TEPH-PEG---------------KG-------- 276 (408)
T ss_dssp CBCBBCEEEEEEEEEHHHHHHTTCCCCE--EEEEEEEEECCSCS---SCCC-TTC---------------HH--------
T ss_pred ceEEeeeEEEEEEeeHHHHHhCCCcEEE--EEEEEEEcCCCCCC---CCCC-CCH---------------HH--------
Confidence 6789999999999875421111 0111 12222222333211 1110 000 00
Q ss_pred CCCccchhHHHHHHHHHHHHhhhcc-ccCCcccchhccccEEEeccCCHHH-----HHHHHHHcCCChhhHhhhhhhhcc
Q 011007 348 GPLVLPASEQLLFLMTLIGRKIFNP-KWKPYIPDFKQAFEHFCIHAGGRAV-----IDELQKNLQLSAEHVEASRMTLHR 421 (496)
Q Consensus 348 gp~vlp~~e~~~~~~~~~~~~v~~~-~~~~~~p~~~~did~f~~H~~~~~v-----~~~i~~~Lgl~~e~~~~S~~~l~r 421 (496)
+ ....++.++. .+. .+|||++.+|+.+..+ +..+.+.+|.+.+++.. ...-..
T Consensus 277 ---------~-----~~ai~~al~~Agl~------~~dId~ve~Hgtgt~~gD~~E~~al~~~~g~~~~~~~v-~s~k~~ 335 (408)
T 1j3n_A 277 ---------A-----ALAMARALKDAGIA------PEQVGYINAHGTSTPVGDRAEVLAIKRVFGDHAKRLMV-SSTKSM 335 (408)
T ss_dssp ---------H-----HHHHHHHHHHHTCC------GGGCCEEECCCCSCHHHHHHHHHHHHHHHHHHHTTCEE-ECTHHH
T ss_pred ---------H-----HHHHHHHHHHcCCC------HHHcCEEEEeCCcCcccCHHHHHHHHHHhcCcCCCceE-ECchhh
Confidence 0 0011333332 333 3899999999998876 66677888776555521 123467
Q ss_pred cCCccCCchHHHHHHHH---HhCCC-----------------------CCCCEEEEEeechhHhhhheeeE
Q 011007 422 FGNTSSSSLWYEMSYIE---EKGRM-----------------------KKGDRVWQIAFGSGFKCNSAVWK 466 (496)
Q Consensus 422 ~GNtsSaSi~~~La~~~---~~g~i-----------------------~~Gd~Vll~~fG~G~~~~sav~r 466 (496)
+||+.+|+-...|.... ++|.+ .+..+++.-+||-|-+-.++|++
T Consensus 336 ~GH~~~AsG~~~li~~~l~l~~~~ipp~~~~~~~~~~~~~~~v~~~~~~~~~~a~~~sfGfGG~na~~vl~ 406 (408)
T 1j3n_A 336 IGHLLGAAGAVEAIATVQALYHGVIPPTINLEDPDPELDLDFVPEPREAKVDYALSNSFAFGGHNAVLAFK 406 (408)
T ss_dssp HCBCGGGHHHHHHHHHHHHHHHTEECCCTTTTSBCTTSCSBCCSSCEECCCSEEEEEEECTTSEEEEEEEE
T ss_pred hccCHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCcccCCCCcCCCCCEEEEecccCCcceEEEEEe
Confidence 99999999888876543 33321 13467888999998877777776
No 50
>3goa_A 3-ketoacyl-COA thiolase; metabolism, fatty acid, phospholipid, IDP01071, acyltransferase, cytoplasm, fatty acid metabolism; 1.70A {Salmonella typhimurium}
Probab=99.65 E-value=2.3e-15 Score=156.55 Aligned_cols=94 Identities=14% Similarity=0.151 Sum_probs=86.5
Q ss_pred HHHHHHHHHHHHHHHc-CCCcCCcCEEEeecc-CCCC-CCcHHHHHHHHcCCCCCceeeEecCCCcchHHHHHHHHHHHH
Q 011007 162 AELVIFSAMDSLLQKT-GLKPKDIDILIVNCS-LFSP-TPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLL 238 (496)
Q Consensus 162 a~~la~~Aa~~aL~~a-gi~p~dID~LI~~ss-~~~~-~Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL 238 (496)
+.+|+.+|++++|+++ |++|+|||.++++|. ++.. .|..+.+++.++|++..+++++++ .+|++++.||.+|..+|
T Consensus 27 ~~~L~~~a~~~Al~~a~gi~~~~Id~v~~g~~~~~~~~~~~~a~~~~~~~Gl~~~~p~~~v~-~aCss~l~Al~~A~~~I 105 (387)
T 3goa_A 27 AEDLSAHLMRSLLARNPSLTAATLDDIYWGCVQQTLEQGFNIARNAALLAEIPHSVPAVTVN-RLCGSSMQALHDAARMI 105 (387)
T ss_dssp HHHHHHHHHHHHHHHCTTSCGGGCCEEEEECSCCSBTTTTTHHHHHHHHTTCCTTSCCEEEE-CGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccCCCHHHcCEEEEEcccCCcccccHHHHHHHHHcCCCCCCcEeEec-CcchHHHHHHHHHHHHH
Confidence 6789999999999999 999999999999875 4444 688999999999997679999999 69999999999999999
Q ss_pred hcCCCCEEEEEEECCCCC
Q 011007 239 QVHPNSNAVVVSTEIITP 256 (496)
Q Consensus 239 ~~~~~~~aLVVs~E~~s~ 256 (496)
++|..++|||+++|.+|.
T Consensus 106 ~sG~~d~vLv~G~e~~s~ 123 (387)
T 3goa_A 106 MTGDAQVCLVGGVEHMGH 123 (387)
T ss_dssp HTTSCSEEEEEEEECTTT
T ss_pred hCCCCCEEEEEEEecCCC
Confidence 999999999999998874
No 51
>1e5m_A KAS II, beta ketoacyl acyl carrier protein synthase II; condensing enzyme, biosynthetic role, carbon-carbon bond formation; 1.54A {Synechocystis SP} SCOP: c.95.1.1 c.95.1.1
Probab=99.64 E-value=1.2e-14 Score=152.55 Aligned_cols=318 Identities=14% Similarity=0.066 Sum_probs=185.3
Q ss_pred CceEEEEeeeecCCCCcccChHHHHHHHhhhhcCCcchHHHHHHHHHHcCCCceeecCCCCcCCCCCCchHHH--HHhHH
Q 011007 86 RHVYLVDYACYKPPVTCRVPFATFMEHSRLILKNNPKSVEFQMRILERSGLGEETCLPPAIHYIPPTPTMEAA--RGEAE 163 (496)
Q Consensus 86 ~~v~Iv~~~~y~P~~~~~v~~~~~~e~~~~~~~~~~~~~~f~~~i~~~sGi~~r~~~~~~~~~~~~~~~~~~~--~~ea~ 163 (496)
++|.|++++|..|. . .+.+++.+.+.. ++-.-..+ .+ ++..++..+....-+........+-+++ .....
T Consensus 7 ~~v~I~G~g~~~p~--g-~~~~~~w~~l~~-g~~~i~~~---~~-~~~~~~~~~~~~~i~~fd~~~~~~~~~~~~~d~~~ 78 (416)
T 1e5m_A 7 KRVVVTGLGAITPI--G-NTLQDYWQGLME-GRNGIGPI---TR-FDASDQACRFGGEVKDFDATQFLDRKEAKRMDRFC 78 (416)
T ss_dssp CCEEEEEEEEEBTT--B-SSHHHHHHHHHT-TCCCEEEC---CS-SCCTTSSCCEEECCCSCCGGGTSCHHHHHTSCHHH
T ss_pred CCEEEEeeeEECCC--C-CCHHHHHHHHHc-CCCeEeeC---Cc-cccccCccceeEEeCCCCccccCCHHHHHhcCHHH
Confidence 46999999999998 3 577888876542 11000000 00 0011222221110000000000111111 12366
Q ss_pred HHHHHHHHHHHHHcCCCcCCcC----EEEeeccC-C-----------------CCC---------CcHHHHHHHHcCCCC
Q 011007 164 LVIFSAMDSLLQKTGLKPKDID----ILIVNCSL-F-----------------SPT---------PSLSAMVINKYKLRS 212 (496)
Q Consensus 164 ~la~~Aa~~aL~~agi~p~dID----~LI~~ss~-~-----------------~~~---------Ps~a~~I~~~Lgl~~ 212 (496)
+|+.+|++++|+++|+++++|| .|+++++. + ... ...+.+|+..||++
T Consensus 79 ~l~l~aa~~Al~dAg~~~~~i~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl~- 157 (416)
T 1e5m_A 79 HFAVCASQQAINDAKLVINELNADEIGVLIGTGIGGLKVLEDQQTILLDKGPSRCSPFMIPMMIANMASGLTAINLGAK- 157 (416)
T ss_dssp HHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTCC-
T ss_pred HHHHHHHHHHHHHcCCChhhcCccceEEEEeecCCcHHHHHHHHHHHHhcCcccCChhHhhhhhhHHHHHHHHHHhCCC-
Confidence 8999999999999999999999 67777542 2 011 25789999999997
Q ss_pred CceeeEecCCCcchHHHHHHHHHHHHhcCCCCEEEEEEECC-CCCCC---------cc-----------CCCcccccccc
Q 011007 213 NIKSFNLSGMGCSAGLISIDLARDLLQVHPNSNAVVVSTEI-ITPNY---------YQ-----------GNERAMLLPNC 271 (496)
Q Consensus 213 ~~~~~dl~g~gCsg~l~al~lA~~lL~~~~~~~aLVVs~E~-~s~~~---------~~-----------~~dr~~l~~~~ 271 (496)
.++++++ .+|++++.||..|.++|++|..+.|||+++|. ++... .. +-|+. -..+
T Consensus 158 -gp~~~v~-~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~~~~~~~~~~~~~~~~ls~~~~~p~~~~rpfd~~--~~G~ 233 (416)
T 1e5m_A 158 -GPNNCTV-TACAAGSNAIGDAFRLVQNGYAKAMICGGTEAAITPLSYAGFASARALSFRNDDPLHASRPFDKD--RDGF 233 (416)
T ss_dssp -SCEECCC-CGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCTTCGGGTCCTTBTT--CCSB
T ss_pred -CceeCcc-chhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHHcCCccCCCCCCccccccCccC--CCCc
Confidence 3899999 69999999999999999999999999999997 34210 00 00111 1357
Q ss_pred ccccccEEEEEeccCCcccc--cceeEeeEEEEEecCCcccccceeecccCCCceeeeechhHHHHHHHHhhhhhhhcCC
Q 011007 272 LFRMGGAAILLSNRRRNRSR--AKYRLVHVVRTHKGADDKAYRCVFEEEDKEGKVGISLSKDLMAIAGEALKSNITTIGP 349 (496)
Q Consensus 272 lfgDGAaA~lLs~~~~~~~~--~~~~L~~~~~t~~~~d~~~~~~~~~~~d~~G~~g~~ls~d~~~v~g~~l~~~i~~~gp 349 (496)
++||||+|+||++.+...++ ..|- .+..+....|+.. +..+.. ++ ..
T Consensus 234 v~geGaaavvL~~~~~A~~~g~~i~a--~I~g~~~~~d~~~---~~~p~~-~~---------------~~---------- 282 (416)
T 1e5m_A 234 VMGEGSGILILEELESALARGAKIYG--EMVGYAMTCDAYH---ITAPVP-DG---------------RG---------- 282 (416)
T ss_dssp CBBCEEEEEEEEEHHHHHHTTCCCCE--EEEEEEEEECCSC---SSSCCT-TC---------------HH----------
T ss_pred eeeeeEEEEEECcHHHHHHCCCeEEE--EEEEEEEccCCCC---CCCCCC-CH---------------HH----------
Confidence 89999999999875421111 1111 1222333334321 111100 00 00
Q ss_pred CccchhHHHHHHHHHHHHhhhcc-ccCCcccchhccccEEEeccCCHHHHHH-----HHHHcCCChhhHhhhhhhhcccC
Q 011007 350 LVLPASEQLLFLMTLIGRKIFNP-KWKPYIPDFKQAFEHFCIHAGGRAVIDE-----LQKNLQLSAEHVEASRMTLHRFG 423 (496)
Q Consensus 350 ~vlp~~e~~~~~~~~~~~~v~~~-~~~~~~p~~~~did~f~~H~~~~~v~~~-----i~~~Lgl~~e~~~~S~~~l~r~G 423 (496)
+ ....++.++. .+. .+|||++..|+.+..+-|. +.+.+|...+++.- -.+-..+|
T Consensus 283 -------~-----~~ai~~al~~agl~------~~dId~ve~Hgtgt~~~D~~E~~al~~~~g~~~~~~~v-~s~k~~~G 343 (416)
T 1e5m_A 283 -------A-----TRAIAWALKDSGLK------PEMVSYINAHGTSTPANDVTETRAIKQALGNHAYNIAV-SSTKSMTG 343 (416)
T ss_dssp -------H-----HHHHHHHHHHHTCC------GGGCCEEECCCCSCHHHHHHHHHHHHHHHGGGGGGSEE-ECTHHHHC
T ss_pred -------H-----HHHHHHHHHHcCCC------HhHCCEEEEECCCCcCcCHHHHHHHHHHHcccCCCCee-eCcchhhc
Confidence 0 0011333332 343 3899999999999876554 44556654444421 12344689
Q ss_pred CccCCchHHHHHHH---HHhCCCC------------------------CCCEEEEEeechhHhhhheeeE
Q 011007 424 NTSSSSLWYEMSYI---EEKGRMK------------------------KGDRVWQIAFGSGFKCNSAVWK 466 (496)
Q Consensus 424 NtsSaSi~~~La~~---~~~g~i~------------------------~Gd~Vll~~fG~G~~~~sav~r 466 (496)
|+.+|+-...+..+ ++++.+. +.++++.-+||.|-+-.++|++
T Consensus 344 H~~gAaG~~~~i~~~~~l~~~~ipp~~~~~~~~p~~~~~~v~~~~~~~~~~~a~~~sfGfGG~n~~~vl~ 413 (416)
T 1e5m_A 344 HLLGGSGGIEAVATVMAIAEDKVPPTINLENPDPECDLDYVPGQSRALIVDVALSNSFGFGGHNVTLAFK 413 (416)
T ss_dssp BCGGGHHHHHHHHHHHHHHHTEECCBTTCSSBCTTCCSCCCBSSCEECCCSEEEEEEEETTTEEEEEEEE
T ss_pred ccHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCccccCCccccCCCCEEEEccccCCCeeEEEEEE
Confidence 99999876666543 3333311 2356777899988777777775
No 52
>3kzu_A 3-oxoacyl-(acyl-carrier-protein) synthase II; seattle structural genomics center for infectious disease, ssgcid, acyltransferase; 1.75A {Brucella melitensis} PDB: 3e60_A
Probab=99.63 E-value=9.2e-15 Score=153.96 Aligned_cols=249 Identities=15% Similarity=0.130 Sum_probs=165.6
Q ss_pred HHHHHHHHHHHHHHHcCCCcCC-cC----EEEeecc---------------------------CCCCCCcHHHHHHHHcC
Q 011007 162 AELVIFSAMDSLLQKTGLKPKD-ID----ILIVNCS---------------------------LFSPTPSLSAMVINKYK 209 (496)
Q Consensus 162 a~~la~~Aa~~aL~~agi~p~d-ID----~LI~~ss---------------------------~~~~~Ps~a~~I~~~Lg 209 (496)
...|+.+|+++||+++|+++++ || .+++.++ +.+..+..+.+|+..||
T Consensus 87 ~~~l~l~aa~~AL~dAGl~~~~~id~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lg 166 (428)
T 3kzu_A 87 FIVYAVGAADQALDDAGWHPENDEDQVRTGVLIGSGIGGIEGIVEAGYTLRDKGPRRISPFFIPGRLINLASGHVSIKHK 166 (428)
T ss_dssp HHHHHHHHHHHHHHHHTCCCCSHHHHHTEEEEEECSSCSHHHHHHHHHHHHHTCGGGSCTTTTTTTCTTHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhcCCChhhhccccceEEEEcccCCcchhHHHHHHHHHhcCccccCchhcccchhhhHHHHHHHHcC
Confidence 6789999999999999999998 77 4555543 22445677899999999
Q ss_pred CCCCceeeEecCCCcchHHHHHHHHHHHHhcCCCCEEEEEEECCC---------------CCCC--------ccCCCccc
Q 011007 210 LRSNIKSFNLSGMGCSAGLISIDLARDLLQVHPNSNAVVVSTEII---------------TPNY--------YQGNERAM 266 (496)
Q Consensus 210 l~~~~~~~dl~g~gCsg~l~al~lA~~lL~~~~~~~aLVVs~E~~---------------s~~~--------~~~~dr~~ 266 (496)
++. ++++++ .+|++++.||..|.++|++|..+.|||+++|.. +... .+..++.
T Consensus 167 l~G--p~~~v~-taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~pfd~~~- 242 (428)
T 3kzu_A 167 LRG--PNHSVV-TACATGTHAIGDAARLIAFGDADVMVAGGTESPVSRISLAGFAACKALSTERNDDPTAASRPYDEDR- 242 (428)
T ss_dssp CCS--CEECBC-CGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCSCTTSGGGTCCTTBTTC-
T ss_pred CCC--ceeeec-CccHHHHHHHHHHHHHHHCCCCCEEEEeeecCcCCHHHHHHHHHccccccCccCCcccccCCcccCC-
Confidence 973 899999 699999999999999999999999999999982 2110 0001111
Q ss_pred cccccccccccEEEEEeccCCccc---ccceeEeeEEEEEecCCcccccceeecccCCCceeeeechhHHHHHHHHhhhh
Q 011007 267 LLPNCLFRMGGAAILLSNRRRNRS---RAKYRLVHVVRTHKGADDKAYRCVFEEEDKEGKVGISLSKDLMAIAGEALKSN 343 (496)
Q Consensus 267 l~~~~lfgDGAaA~lLs~~~~~~~---~~~~~L~~~~~t~~~~d~~~~~~~~~~~d~~G~~g~~ls~d~~~v~g~~l~~~ 343 (496)
..+++||||+|+||++.+...+ +...++ ..+....|+.. +..+.. .+ .
T Consensus 243 --~G~v~gdGAaavvL~~~~~A~~~g~~i~a~i---~g~~~~~dg~~---~~~p~~-~~---------------~----- 293 (428)
T 3kzu_A 243 --DGFVMGEGAGIVVLEELEHALARGAKIYAEV---IGYGMSGDAFH---ITAPTE-SG---------------E----- 293 (428)
T ss_dssp --CSBCBBCEEEEEEEEEHHHHHHHTCCCCEEE---EEEEEEECCSC---SSSCCT-TC---------------H-----
T ss_pred --CceeecCceEEEEEccHHHHHhCCCceEEEE---EEEEEccCCCC---CCCCCC-CH---------------H-----
Confidence 3578999999999987542111 111122 22222233221 011100 00 0
Q ss_pred hhhcCCCccchhHHHHHHHHHHHHhhhcc-ccCCcccchhccccEEEec----cCCHHHHHHHHHHcCCChhhHhhhhhh
Q 011007 344 ITTIGPLVLPASEQLLFLMTLIGRKIFNP-KWKPYIPDFKQAFEHFCIH----AGGRAVIDELQKNLQLSAEHVEASRMT 418 (496)
Q Consensus 344 i~~~gp~vlp~~e~~~~~~~~~~~~v~~~-~~~~~~p~~~~did~f~~H----~~~~~v~~~i~~~Lgl~~e~~~~S~~~ 418 (496)
. .....++.++. .++ .+|||++..| ++....++.+.+.++.+.+++.. -..
T Consensus 294 -------------~----~~~ai~~al~~Agl~------~~dId~ve~HgtgT~~d~~e~~al~~~~g~~~~~~~v-~s~ 349 (428)
T 3kzu_A 294 -------------G----AQRCMVAALKRAGIV------PDEIDYINAHGTSTMADTIELGAVERVVGEAAAKISM-SST 349 (428)
T ss_dssp -------------H----HHHHHHHHHHHHTCC------GGGCCEEECCCCSSTTHHHHHHHHHHHHGGGGGGCEE-ECT
T ss_pred -------------H----HHHHHHHHHHHcCCC------HHHeeEEEecCCcchhhHHHHHHHHHHhccCCCceee-CCc
Confidence 0 00112334432 343 3899999999 88888889999999988777642 134
Q ss_pred hcccCCccCCchHHHHHHHH---HhCCC------------------------CCCCEEEEEeechhHhhhheeeEe
Q 011007 419 LHRFGNTSSSSLWYEMSYIE---EKGRM------------------------KKGDRVWQIAFGSGFKCNSAVWKC 467 (496)
Q Consensus 419 l~r~GNtsSaSi~~~La~~~---~~g~i------------------------~~Gd~Vll~~fG~G~~~~sav~r~ 467 (496)
...+||+.+++=...+.... +++.+ .+.++++.-+||.|-+..++|++.
T Consensus 350 k~~~GH~~gAsG~~~~i~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~sfGfgG~na~~vl~~ 425 (428)
T 3kzu_A 350 KSSIGHLLGAAGAAEAVFSTLAIRDNIAPATLNLDNPAAQTRIDLVPHKPRERKIDVALSNSFGFGGTNASLVLRR 425 (428)
T ss_dssp HHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCSSBSSCCSSBCCBSSCEECCCSEEEEEEEETTTEEEEEEEEC
T ss_pred hhhhCCCchhhHHHHHHHHHHHhccCccCCCCCCCCCCCCCCcccCCCCCcCCCCCEEEEeCcccChhhEEEEEee
Confidence 56789998887777665543 33321 234677888999988777777763
No 53
>2iik_A 3-ketoacyl-COA thiolase, peroxisomal; fatty acid metabolism, structural genomics, structural genom consortium, SGC, transferase; 2.55A {Homo sapiens}
Probab=99.63 E-value=1.6e-15 Score=159.27 Aligned_cols=135 Identities=9% Similarity=0.089 Sum_probs=93.2
Q ss_pred CCCCcccChHHHHHHHhhhhcCCcchHHHHHHHHH--HcCCCcee-ecCCCCcCCCCCCchHHHHHhHHHHHHHHHHHHH
Q 011007 98 PPVTCRVPFATFMEHSRLILKNNPKSVEFQMRILE--RSGLGEET-CLPPAIHYIPPTPTMEAARGEAELVIFSAMDSLL 174 (496)
Q Consensus 98 P~~~~~v~~~~~~e~~~~~~~~~~~~~~f~~~i~~--~sGi~~r~-~~~~~~~~~~~~~~~~~~~~ea~~la~~Aa~~aL 174 (496)
|+ ++++|+++.+..... ..++. +|.. +++++.++ ...+++ .+.+|+.+|++++|
T Consensus 11 P~--~~~~n~~~~~~~~~~-~~~~v------~Ivg~~rt~~g~~~~~~~~~~--------------~~~~L~~~Aa~~AL 67 (418)
T 2iik_A 11 VD--LGTENLYFQSMAPQA-SAADV------VVVHGRRTAICRAGRGGFKDT--------------TPDELLSAVMTAVL 67 (418)
T ss_dssp ------------------C-CTTCE------EEEEEEECCCEETTTSTTTTC--------------CHHHHHHHHHHHHH
T ss_pred CC--ccccHHHHHHHhhhc-cCCCe------EEEeeeecCceecCCCCCCCC--------------CHHHHHHHHHHHHH
Confidence 66 899999998875521 01222 2333 56666542 222222 26899999999999
Q ss_pred HHcCCCcCCcCEEEeecc-CCCCCCcHHHHHHHHcCCCCCceeeEecCCCcchHHHHHHHHHHHHhcCCCCEEEEEEECC
Q 011007 175 QKTGLKPKDIDILIVNCS-LFSPTPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLLQVHPNSNAVVVSTEI 253 (496)
Q Consensus 175 ~~agi~p~dID~LI~~ss-~~~~~Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL~~~~~~~aLVVs~E~ 253 (496)
+++|++|+|||.++++++ +++..|..+..++.++|++.+.++++++ .+|++++.||..|.++|++|..+.|||+++|.
T Consensus 68 ~dAgl~~~~id~v~~g~~~~~~~~~~~a~~~a~~lGl~~~~p~~~v~-~aCss~~~Al~~A~~~I~~G~~d~vLv~G~e~ 146 (418)
T 2iik_A 68 KDVNLRPEQLGDICVGNVLQPGAGAIMARIAQFLSDIPETVPLSTVN-RQCSSGLQAVASIAGGIRNGSYDIGMACGVES 146 (418)
T ss_dssp HHHTCCGGGCCCEEEECSSSBGGGHHHHHHHHHHTTCCTTSCEEEEE-CGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEE
T ss_pred HHcCCCHHHCCEEEEEecCCccccccHHHHHHHHcCCCCCceEEEeC-CCCHHHHHHHHHHHHHHHCCCCCEEEEecccc
Confidence 999999999999998865 4455577888899999996578999999 69999999999999999999999999999998
Q ss_pred CCC
Q 011007 254 ITP 256 (496)
Q Consensus 254 ~s~ 256 (496)
+|.
T Consensus 147 ~s~ 149 (418)
T 2iik_A 147 MSL 149 (418)
T ss_dssp TTT
T ss_pred Ccc
Confidence 864
No 54
>3svk_A Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium avium}
Probab=99.62 E-value=2.9e-15 Score=156.77 Aligned_cols=94 Identities=13% Similarity=0.156 Sum_probs=79.1
Q ss_pred HHHHHHHHHHHHHHH-cCCCcCCcCEEEeecc-CCC-CCCcHHHHHHHHcCCCCCceeeEecCCCcchHHHHHHHHHHHH
Q 011007 162 AELVIFSAMDSLLQK-TGLKPKDIDILIVNCS-LFS-PTPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLL 238 (496)
Q Consensus 162 a~~la~~Aa~~aL~~-agi~p~dID~LI~~ss-~~~-~~Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL 238 (496)
+.+|+.+|++++|++ +|++|+|||.+|++|. ++. ..|..+.+++.++|++..+++++++ .+|++++.||.+|..+|
T Consensus 32 ~~~L~~~A~~~AL~~~AGl~~~dId~vi~g~~~~~~~~~~~~a~~va~~lGlp~~~pa~~v~-~~Css~~~Al~~A~~~I 110 (407)
T 3svk_A 32 PLNLVVGLVDELRRRYPDLDETLISDMILGVVSPVGDQGGDIARTAVLAAGLPETTGGVQLN-RFCASGLEAVNTAAQKV 110 (407)
T ss_dssp HHHHHHHHHHHHHHHSTTCCGGGEEEEEEECC--------CHHHHHHHHTTCCTTCEEEEEC----CBSCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhcCcCHHHCCEEEEEecCccccccCcHHHHHHHHcCCCCCCceEEec-CcChhHHHHHHHHHHHH
Confidence 678999999999999 9999999999999875 443 3688999999999996689999999 69999999999999999
Q ss_pred hcCCCCEEEEEEECCCCC
Q 011007 239 QVHPNSNAVVVSTEIITP 256 (496)
Q Consensus 239 ~~~~~~~aLVVs~E~~s~ 256 (496)
++|..++|||+++|.+|.
T Consensus 111 ~sG~~d~vLv~G~e~~s~ 128 (407)
T 3svk_A 111 RSGWDDLVLAGGVESMSR 128 (407)
T ss_dssp HHTSCCEEEEEEEECC--
T ss_pred HcCCCCEEEEEEEccccc
Confidence 999999999999999874
No 55
>1ox0_A Beta ketoacyl-acyl carrier protein synthase; transferase; 1.30A {Streptococcus pneumoniae} SCOP: c.95.1.1 c.95.1.1 PDB: 1oxh_A 2alm_A 2rjt_A
Probab=99.60 E-value=7.5e-14 Score=147.02 Aligned_cols=317 Identities=13% Similarity=0.064 Sum_probs=183.1
Q ss_pred CCCceEEEEeeeecCCCCcccChHHHHHHHhhhhcCCcchHHHHHHHHHHcCCCceeecCCCCcC----CCCCCchHHHH
Q 011007 84 KPRHVYLVDYACYKPPVTCRVPFATFMEHSRLILKNNPKSVEFQMRILERSGLGEETCLPPAIHY----IPPTPTMEAAR 159 (496)
Q Consensus 84 ~~~~v~Iv~~~~y~P~~~~~v~~~~~~e~~~~~~~~~~~~~~f~~~i~~~sGi~~r~~~~~~~~~----~~~~~~~~~~~ 159 (496)
+-++|.|+++||..|. . .+.+++.+.+.. +.-.-..+ .+ ++..++..+....-+... .++ ......
T Consensus 21 ~m~~v~ItG~g~~~P~--g-~~~~~~w~~l~~-g~~~i~~~---~~-~~~~~~~~~~~~~v~~fd~~~~~~~--~~~~~~ 90 (430)
T 1ox0_A 21 KLNRVVVTGYGVTSPI--G-NTPEEFWNSLAT-GKIGIGGI---TK-FDHSDFDVHNAAEIQDFPFDKYFVK--KDTNRF 90 (430)
T ss_dssp CCCCEEEEEEEEEBTT--B-SSHHHHHHHHHH-TCCCEEEC---CS-SCCTTSSCCEEECCSSCCHHHHCCG--GGGGTC
T ss_pred cCCCEEEEEEEEECCC--c-CCHHHHHHHHHc-CCCeeeeC---Cc-ccccCCccceeeeccCCChhhcCCH--HHHHhc
Confidence 3467999999999998 3 677888776542 11000000 00 001122211111000000 000 001111
Q ss_pred HhHHHHHHHHHHHHHHHcCCCcCCcC----EEEeeccC-C---------------------CCCC-----cHHHHHHHHc
Q 011007 160 GEAELVIFSAMDSLLQKTGLKPKDID----ILIVNCSL-F---------------------SPTP-----SLSAMVINKY 208 (496)
Q Consensus 160 ~ea~~la~~Aa~~aL~~agi~p~dID----~LI~~ss~-~---------------------~~~P-----s~a~~I~~~L 208 (496)
....+|+.+|++++|+++|+++++|| .+++.++. + +..| ..+.+|+..|
T Consensus 91 d~~~~l~l~aa~~AL~dAG~~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~l 170 (430)
T 1ox0_A 91 DNYSLYALYAAQEAVNHANLDVEALNRDRFGVIVASGIGGIKEIEDQVLRLHEKGPKRVKPMTLPKALPNMASGNVAMRF 170 (430)
T ss_dssp CHHHHHHHHHHHHHHHHTTCCTTTSCGGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHcCCChhhcCccceEEEEEecCCcHHHHHHHHHHHHhcCcccCChhhhhccchhHHHHHHHHHh
Confidence 23678999999999999999999999 46666542 2 1112 4788999999
Q ss_pred CCCCCceeeEecCCCcchHHHHHHHHHHHHhcCCCCEEEEEEECCCCCC----------Ccc----CC------Cccccc
Q 011007 209 KLRSNIKSFNLSGMGCSAGLISIDLARDLLQVHPNSNAVVVSTEIITPN----------YYQ----GN------ERAMLL 268 (496)
Q Consensus 209 gl~~~~~~~dl~g~gCsg~l~al~lA~~lL~~~~~~~aLVVs~E~~s~~----------~~~----~~------dr~~l~ 268 (496)
|++. ++++++ .+|++++.||..|.++|++|..+.|||+++|..... ... +. |+. -
T Consensus 171 gl~G--p~~~v~-~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~p~~~~~~~~~~~ls~~~~p~~~~~pFd~~--~ 245 (430)
T 1ox0_A 171 GANG--VCKSIN-TACSSSNDAIGDAFRSIKFGFQDVMLVGGTEASITPFAIAGFQALTALSTTEDPTRASIPFDKD--R 245 (430)
T ss_dssp TCCS--CEECCC-CGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCSSTTSSSCTTBTT--C
T ss_pred cCCC--ceEeec-CchHHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHhCCCccCCCCCCCCCCCCCCC--C
Confidence 9973 899999 699999999999999999999999999999985321 011 00 111 1
Q ss_pred cccccccccEEEEEeccCCcccccceeEe-eEEEEEecCCcccccceeecccCCCceeeeechhHHHHHHHHhhhhhhhc
Q 011007 269 PNCLFRMGGAAILLSNRRRNRSRAKYRLV-HVVRTHKGADDKAYRCVFEEEDKEGKVGISLSKDLMAIAGEALKSNITTI 347 (496)
Q Consensus 269 ~~~lfgDGAaA~lLs~~~~~~~~~~~~L~-~~~~t~~~~d~~~~~~~~~~~d~~G~~g~~ls~d~~~v~g~~l~~~i~~~ 347 (496)
..+++||||+|+||++.+...++ +..+. .+..+....|+.. +..+. .++ ..
T Consensus 246 ~g~~~geGAaavvL~~~~~A~~~-g~~i~a~I~g~~~~~dg~~---~~~p~-~~~---------------~~-------- 297 (430)
T 1ox0_A 246 NGFVMGEGSGMLVLESLEHAEKR-GATILAEVVGYGNTCDAYH---MTSPH-PEG---------------QG-------- 297 (430)
T ss_dssp CSBCBCCEEEEEEEEEHHHHHHT-TCCCCEEEEEEEEEECCSC---SSSCC-TTC---------------HH--------
T ss_pred CCccccceEEEEEECcHHHHHhC-CCceEEEEEEEEEecCCCC---CCCCC-CCh---------------HH--------
Confidence 36799999999999875421111 11111 1222222333321 11110 000 00
Q ss_pred CCCccchhHHHHHHHHHHHHhhhcc-ccCCcccchhccccEEEeccCCHHHHHHH-----HHHcCCChhhHhhhhhhhcc
Q 011007 348 GPLVLPASEQLLFLMTLIGRKIFNP-KWKPYIPDFKQAFEHFCIHAGGRAVIDEL-----QKNLQLSAEHVEASRMTLHR 421 (496)
Q Consensus 348 gp~vlp~~e~~~~~~~~~~~~v~~~-~~~~~~p~~~~did~f~~H~~~~~v~~~i-----~~~Lgl~~e~~~~S~~~l~r 421 (496)
+ ....++.++. .+. .+|||++.+|+.+..+-|.+ .+.+|-+. .+. .+-..
T Consensus 298 ---------~-----~~ai~~al~~Agl~------~~dId~ve~Hgtgt~~~D~~E~~al~~~~g~~~-~v~---s~k~~ 353 (430)
T 1ox0_A 298 ---------A-----IKAIKLALEEAEIS------PEQVAYVNAHGTSTPANEKGESGAIVAVLGKEV-PVS---STKSF 353 (430)
T ss_dssp ---------H-----HHHHHHHHHHHTCC------GGGCCCEECCCCSCHHHHHHHHHHHHHHHCSSS-EEE---CTHHH
T ss_pred ---------H-----HHHHHHHHHHhCcC------HHHcCEEEEeCCcCcccCHHHHHHHHHHhCCCc-eec---ccccc
Confidence 0 0011333332 333 38999999999998876643 34444211 111 12234
Q ss_pred cCCccCCchHHHHHHH---HHhCCC------------------------CCCCEEEEEeechhHhhhheeeEe
Q 011007 422 FGNTSSSSLWYEMSYI---EEKGRM------------------------KKGDRVWQIAFGSGFKCNSAVWKC 467 (496)
Q Consensus 422 ~GNtsSaSi~~~La~~---~~~g~i------------------------~~Gd~Vll~~fG~G~~~~sav~r~ 467 (496)
+||+.+|+-...+..+ ++++.+ .+..+++.-+||.|-+..++|++.
T Consensus 354 ~GH~~gAaG~~~~i~~~~~l~~~~ipp~~~~~~~~p~~~~~~v~~~~~~~~~~~a~~~sfGfGG~na~~vl~~ 426 (430)
T 1ox0_A 354 TGHLLGAAGAVEAIVTIEAMRHNFVPMTAGTSEVSDYIEANVVYGQGLEKEIPYAISNTFGFGGHNAVLAFKR 426 (430)
T ss_dssp HCBCGGGHHHHHHHHHHHHHHHTEECCBSSCCSBCTTCCSEECBSSCEECCCSEEEEEEEETTTEEEEEEEEC
T ss_pred cccchhhHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCcccCCCCCcCCCCCEEEEeCccCCCceEEEEEee
Confidence 7999998877666553 333321 123577888999888877788764
No 56
>2gp6_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiolase fold, structural genomics, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis}
Probab=99.60 E-value=2.2e-13 Score=143.68 Aligned_cols=318 Identities=13% Similarity=0.055 Sum_probs=184.2
Q ss_pred CCCceEEEEeeeecCCCCcccChHHHHHHHhhhhc--CCcchHHHHHHHHHHcCCCcee--ecCCCCcCCCCCCchHHHH
Q 011007 84 KPRHVYLVDYACYKPPVTCRVPFATFMEHSRLILK--NNPKSVEFQMRILERSGLGEET--CLPPAIHYIPPTPTMEAAR 159 (496)
Q Consensus 84 ~~~~v~Iv~~~~y~P~~~~~v~~~~~~e~~~~~~~--~~~~~~~f~~~i~~~sGi~~r~--~~~~~~~~~~~~~~~~~~~ 159 (496)
..++|.|+|+||..|.. .+.+++.+.+.. ++ +.+-. +| -.+..++..+. .++++. ....+-.+++
T Consensus 26 ~~~~vaI~G~g~~~p~g---~~~~~~w~~l~~-g~~~i~~~~-~~---~~~~~~~~~~~~~~v~~d~---~~~~~~~~~~ 94 (434)
T 2gp6_A 26 AFPYVVVTGIAMTTALA---TDAETTWKLLLD-RQSGIRTLD-DP---FVEEFDLPVRIGGHLLEEF---DHQLTRIELR 94 (434)
T ss_dssp TSCCEEEEEEEEECSSC---SSHHHHHHHHHT-TCCCEEECC-CH---HHHHHCCSCCEEECCSCCS---TTSSCHHHHH
T ss_pred CCCCEEEEeeEEeCCCC---CCHHHHHHHHHc-CCCeeeeCC-cc---ccccccCccceeEEcCCch---hhhCCHHHHH
Confidence 34579999999999983 478888887643 11 01100 11 01123333332 122110 0001111221
Q ss_pred --HhHHHHHHHHHHHHHHHcCCC---cCCcCEEEeeccCCC-----------------CC--------C-cHHHHHHHHc
Q 011007 160 --GEAELVIFSAMDSLLQKTGLK---PKDIDILIVNCSLFS-----------------PT--------P-SLSAMVINKY 208 (496)
Q Consensus 160 --~ea~~la~~Aa~~aL~~agi~---p~dID~LI~~ss~~~-----------------~~--------P-s~a~~I~~~L 208 (496)
....+|+.+|++++|+++|++ +++|++++-++..++ .. | ..+.+|+.+|
T Consensus 95 ~~d~~~~l~l~aa~~ALedAG~~~~~~~~igv~vgt~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~l 174 (434)
T 2gp6_A 95 RMGYLQRMSTVLSRRLWENAGSPEVDTNRLMVSIGTGLGSAEELVFSYDDMRARGMKAVSPLTVQKYMPNGAAAAVGLER 174 (434)
T ss_dssp TCCHHHHHHHHHHHHHHHHTTCCCCCTTSEEEEEECSSCSCHHHHHHHHHHTTSCSSSSCTTHHHHHSTTHHHHHHHHHS
T ss_pred hCCHHHHHHHHHHHHHHHhcCCCccCCCceEEEEccccccHHHHHHHHHHHHhcCccccChhhhhccchhhHHHHHhhhh
Confidence 236789999999999999984 566765443333332 11 2 5788999999
Q ss_pred CCCCCceeeEecCCCcchHHHHHHHHHHHHhcCCCCEEEEEEECCCCCC-----------Ccc-----CCCccc----cc
Q 011007 209 KLRSNIKSFNLSGMGCSAGLISIDLARDLLQVHPNSNAVVVSTEIITPN-----------YYQ-----GNERAM----LL 268 (496)
Q Consensus 209 gl~~~~~~~dl~g~gCsg~l~al~lA~~lL~~~~~~~aLVVs~E~~s~~-----------~~~-----~~dr~~----l~ 268 (496)
|++ .++++++ .+|++++.||.+|.++|++|..+.|||+++|..+.. ... ++.+.. --
T Consensus 175 gl~--Gp~~~v~-~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~~ls~~~~~p~~~~~pfd~~~ 251 (434)
T 2gp6_A 175 HAK--AGVMTPV-SACASGAEAIARAWQQIVLGEADAAICGGVETRIEAVPIAGFAQMRIVMSTNNDDPAGACRPFDRDR 251 (434)
T ss_dssp CCC--SCEECEE-CGGGHHHHHHHHHHHHHHHTSCSEEEEEEECCCCCHHHHHHHHTTTSSCCCCTTCTTTSCCSSBTTC
T ss_pred cCC--CCeEEeC-CCCcHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHHHHHHhcCCCCCCCCceecccccC
Confidence 997 4899999 699999999999999999999999999999986541 111 010000 01
Q ss_pred cccccccccEEEEEeccCCcccccceeE-eeEEEEEecCCcccccceeecccCCCceeeeechhHHHHHHHHhhhhhhhc
Q 011007 269 PNCLFRMGGAAILLSNRRRNRSRAKYRL-VHVVRTHKGADDKAYRCVFEEEDKEGKVGISLSKDLMAIAGEALKSNITTI 347 (496)
Q Consensus 269 ~~~lfgDGAaA~lLs~~~~~~~~~~~~L-~~~~~t~~~~d~~~~~~~~~~~d~~G~~g~~ls~d~~~v~g~~l~~~i~~~ 347 (496)
..+++||||+|+||++.+...++ +..+ ..+..+....|+.. +..+. ..+ ..
T Consensus 252 ~g~v~gdGAaavvL~~~~~A~~~-g~~i~a~I~g~~~~~Dg~~---~~~p~-~~~---------------~~-------- 303 (434)
T 2gp6_A 252 DGFVFGEGGALLLIETEEHAKAR-GANILARIMGASITSDGFH---MVAPD-PNG---------------ER-------- 303 (434)
T ss_dssp CCCCBBCCEEEEEEEEHHHHHTT-TCCCCEEEEEEEEEECCSC---SSSCC-TTC---------------HH--------
T ss_pred CCcceecceEEEEeCcHHHHHHC-CCceEEEEEEEEEecCCCC---CCCCC-CCh---------------HH--------
Confidence 35789999999999875421111 1011 11222233334332 11110 000 00
Q ss_pred CCCccchhHHHHHHHHHHHHhhhcc-ccCCcccchhccccEEEeccCCHHHHHHH-----HHHcCCChhhHhhhhhhhcc
Q 011007 348 GPLVLPASEQLLFLMTLIGRKIFNP-KWKPYIPDFKQAFEHFCIHAGGRAVIDEL-----QKNLQLSAEHVEASRMTLHR 421 (496)
Q Consensus 348 gp~vlp~~e~~~~~~~~~~~~v~~~-~~~~~~p~~~~did~f~~H~~~~~v~~~i-----~~~Lgl~~e~~~~S~~~l~r 421 (496)
+ ....++.++. .+. .+|||++.+|..+..+.|.+ .+.+|-. ++.. ......
T Consensus 304 ---------~-----~~ai~~al~~Agl~------~~dId~ve~Hgtgt~~~D~~E~~al~~~fg~~--~~~v-~s~k~~ 360 (434)
T 2gp6_A 304 ---------A-----GHAITRAIQLAGLA------PGDIDHVNAHATGTQVGDLAEGRAINNALGGN--RPAV-YAPKSA 360 (434)
T ss_dssp ---------H-----HHHHHHHHHHTTCC------TTTEEEEECCCCSCHHHHHHHHHHHHHHHTTC--CCEE-CCTHHH
T ss_pred ---------H-----HHHHHHHHHHcCCC------HHHcCEEEEeCCcCccchHHHHHHHHHHhccC--CCCc-ccchhh
Confidence 0 0112334432 333 38999999998887775443 3334321 2211 234556
Q ss_pred cCCccCCchHHHHHHH---HHhCCCC------------------------CCCEEEEEeechhHhhhheeeE
Q 011007 422 FGNTSSSSLWYEMSYI---EEKGRMK------------------------KGDRVWQIAFGSGFKCNSAVWK 466 (496)
Q Consensus 422 ~GNtsSaSi~~~La~~---~~~g~i~------------------------~Gd~Vll~~fG~G~~~~sav~r 466 (496)
+||+.+|+=...+..+ ++.+.+. +-.+++.-+||.|-+-.++|++
T Consensus 361 ~GH~~gAaG~~~~i~~~~~l~~~~ipp~~~~~~~~p~~~~~~v~~~~~~~~~~~a~~~sfGfGG~na~~vl~ 432 (434)
T 2gp6_A 361 LGHSVGAVGAVESILTVLALRDQVIPPTLNLVNLDPEIDLDVVAGEPRPGNYRYAINNSFGFGGHNVAIAFG 432 (434)
T ss_dssp HCBCTTTHHHHHHHHHHHHHHHSCCCCCSSCSSBCTTCCCEECCSSCCCSCCCEEEEEEEETTTEEEEEEEE
T ss_pred hcCchhhhHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCccccCCCccCCCCCEEEEeCCcCCCeeEEEEEE
Confidence 9999999877766543 4455432 2356777889988776677765
No 57
>2iwz_A 3-oxoacyl-[acyl-carrier-protein] synthase; mitochondria, mitochondrion, lipid synthesis, fatty acid SYN fatty acid biosynthesis; 1.65A {Homo sapiens} PDB: 2iwy_A 2c9h_A
Probab=99.58 E-value=8.8e-14 Score=146.88 Aligned_cols=316 Identities=13% Similarity=0.090 Sum_probs=183.4
Q ss_pred CceEEEEeeeecCCCCcccChHHHHHHHhhhhc--CCcchHHHHHHHHHHcCCCcee--ecCC----CCcCCCCCCchHH
Q 011007 86 RHVYLVDYACYKPPVTCRVPFATFMEHSRLILK--NNPKSVEFQMRILERSGLGEET--CLPP----AIHYIPPTPTMEA 157 (496)
Q Consensus 86 ~~v~Iv~~~~y~P~~~~~v~~~~~~e~~~~~~~--~~~~~~~f~~~i~~~sGi~~r~--~~~~----~~~~~~~~~~~~~ 157 (496)
++|.|+|+||..|. - .+.+++.+.+.. ++ +.+-. +| +..++..+. .++. +......-.+-.+
T Consensus 21 ~~v~ItG~g~~~p~--g-~~~~~~w~~l~~-g~~~i~~~~-~~-----~~~~~~~~~~~~~~~~~~~~~fd~~~~~~~~~ 90 (438)
T 2iwz_A 21 RRVVITGIGLVTPL--G-VGTHLVWDRLIG-GESGIVSLV-GE-----EYKSIPCSVAAYVPRGSDEGQFNEQNFVSKSD 90 (438)
T ss_dssp CCEEEEEEEEEETT--E-ESHHHHHHHHHT-TCCCEEECC-SG-----GGTTSSCCEEECCCBSSSTTSBCGGGTSCHHH
T ss_pred CCEEEEeeeEECCC--C-CCHHHHHHHHHc-CCCccccCC-ch-----hcccCccceeeeeccccccccCChhhcCCHHH
Confidence 57999999999998 3 678888876642 11 00000 00 111111111 1111 0010000011111
Q ss_pred H--HHhHHHHHHHHHHHHHHHcCCCc-CCcC----EEEeecc-CCC-----------------C--------CC-cHHHH
Q 011007 158 A--RGEAELVIFSAMDSLLQKTGLKP-KDID----ILIVNCS-LFS-----------------P--------TP-SLSAM 203 (496)
Q Consensus 158 ~--~~ea~~la~~Aa~~aL~~agi~p-~dID----~LI~~ss-~~~-----------------~--------~P-s~a~~ 203 (496)
+ .....+|+.+|+++||+++|+++ ++|| .|++.++ .++ . .| ..+.+
T Consensus 91 ~~~~d~~~~l~l~aa~~AL~dAGl~~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ 170 (438)
T 2iwz_A 91 IKSMSSPTIMAIGAAELAMKDSGWHPQSEADQVATGVAIGMGMIPLEVVSETALNFQTKGYNKVSPFFVPKILVNMAAGQ 170 (438)
T ss_dssp HTTSCHHHHHHHHHHHHHHHHHTCCCCSHHHHHTEEEEEEESCCCHHHHHHHHHHHHHHCGGGSCTTHHHHTCTTHHHHH
T ss_pred HHhcCHHHHHHHHHHHHHHHHcCCCCcccccCcceEEEEecccCcHHHHHHHHHHHHhcCCcccChhhhhhhhhhHHHHH
Confidence 1 12367899999999999999998 8777 4666643 221 1 22 57899
Q ss_pred HHHHcCCCCCceeeEecCCCcchHHHHHHHHHHHHhcCCCCEEEEEEECCC-CCC---------Ccc----------CCC
Q 011007 204 VINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLLQVHPNSNAVVVSTEII-TPN---------YYQ----------GNE 263 (496)
Q Consensus 204 I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL~~~~~~~aLVVs~E~~-s~~---------~~~----------~~d 263 (496)
|+.+||++. ++++++ .+|++++.||..|.++|++|..+.|||+++|.. +.. ... +-|
T Consensus 171 ia~~lgl~g--p~~~v~-taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~p~~~~~~~~~~~ls~~~~p~~~~~pfd 247 (438)
T 2iwz_A 171 VSIRYKLKG--PNHAVS-TACTTGAHAVGDSFRFIAHGDADVMVAGGTDSCISPLSLAGFSRARALSTNSDPKLACRPFH 247 (438)
T ss_dssp HHHHHTCCS--CEECBC-CGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCSCTTTSCCTTC
T ss_pred HHHHhCCCC--ceeeec-CchhHHHHHHHHHHHHHHcCCCCEEEEEeeehhcCHHHHHHHHhcCCcCCCCCCCcccccCC
Confidence 999999973 899999 699999999999999999999999999999973 320 000 001
Q ss_pred ccccccccccccccEEEEEeccCCcccc--cceeEeeEEEEEecCCcccccceeecccCCCceeeeechhHHHHHHHHhh
Q 011007 264 RAMLLPNCLFRMGGAAILLSNRRRNRSR--AKYRLVHVVRTHKGADDKAYRCVFEEEDKEGKVGISLSKDLMAIAGEALK 341 (496)
Q Consensus 264 r~~l~~~~lfgDGAaA~lLs~~~~~~~~--~~~~L~~~~~t~~~~d~~~~~~~~~~~d~~G~~g~~ls~d~~~v~g~~l~ 341 (496)
+. -..+++||||+|+||++.+...++ ..|- .+..+....|+.. +..+.. ++ . +
T Consensus 248 ~~--~~G~~~geGAaavvL~~~~~A~~~g~~i~a--~I~g~~~~~d~~~---~t~p~~-~~-------~------~---- 302 (438)
T 2iwz_A 248 PK--RDGFVMGEGAAVLVLEEYEHAVQRRARIYA--EVLGYGLSGDAGH---ITAPDP-EG-------E------G---- 302 (438)
T ss_dssp TT--CCSBCBBCEEEEEEEEEHHHHHHTTCCCCE--EEEEEEEEECCSC---SSSCCT-TC-------H------H----
T ss_pred CC--CCCEEeeceEEEEEeccHHHHHhCCCceEE--EEecceecCCCCC---CCCCCC-CH-------H------H----
Confidence 11 035799999999999875421111 0111 1222233334321 111100 00 0 0
Q ss_pred hhhhhcCCCccchhHHHHHHHHHHHHhhhcc-ccCCcccchhccccEEEeccCCHHHHH-----HHHHHcCCChhhHhhh
Q 011007 342 SNITTIGPLVLPASEQLLFLMTLIGRKIFNP-KWKPYIPDFKQAFEHFCIHAGGRAVID-----ELQKNLQLSAEHVEAS 415 (496)
Q Consensus 342 ~~i~~~gp~vlp~~e~~~~~~~~~~~~v~~~-~~~~~~p~~~~did~f~~H~~~~~v~~-----~i~~~Lgl~~e~~~~S 415 (496)
+ ....++.++. .+. .+|||++..|+.+..+-| .+.+.+|...+++.-
T Consensus 303 ---------------~-----~~ai~~Al~~Agl~------p~dId~ve~HgtgT~~gD~~E~~al~~~fg~~~~~~~v- 355 (438)
T 2iwz_A 303 ---------------A-----LRCMAAALKDAGVQ------PEEISYINAHATSTPLGDAAENKAIKHLFKDHAYALAV- 355 (438)
T ss_dssp ---------------H-----HHHHHHHHHHHTCC------GGGCCEEECCCCSCHHHHHHHHHHHHHHHGGGGGTSEE-
T ss_pred ---------------H-----HHHHHHHHHHcCCC------HHHcCEEEecCCCCcccCHHHHHHHHHHHhccCCCcce-
Confidence 0 0011333332 333 389999999999977644 344556554444321
Q ss_pred hhhhcccCCccCCchHHHHHHH---HHhCCCC------------------------C---CCEEEEEeechhHhhhheee
Q 011007 416 RMTLHRFGNTSSSSLWYEMSYI---EEKGRMK------------------------K---GDRVWQIAFGSGFKCNSAVW 465 (496)
Q Consensus 416 ~~~l~r~GNtsSaSi~~~La~~---~~~g~i~------------------------~---Gd~Vll~~fG~G~~~~sav~ 465 (496)
-.+-..+||+.+|+-...+..+ ++++.+. + -.+.+.-+||.|-+..++|+
T Consensus 356 ~s~K~~~GH~~gAaG~~~li~~~l~l~~~~ipp~~~~~~~~p~~~~~~v~~~~~~~~~~~~~~a~~~sfGfGG~na~~vl 435 (438)
T 2iwz_A 356 SSTKGATGHLLGAAGAVEAAFTTLACYYQKLPPTLNLDCSEPEFDLNYVPLKAQEWKTEKRFIGLTNSFGFGGTNATLCI 435 (438)
T ss_dssp ECCHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCSCCCTTCCSBCCBSSCEECCCSSSCEEEEEEEETTTEEEEEEE
T ss_pred ecchhhhcCCHHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCccccCCCcccCCCCCccEEEEecCcCCCeeEEEEE
Confidence 1234567999999888776654 3343321 1 24566678998877777776
Q ss_pred E
Q 011007 466 K 466 (496)
Q Consensus 466 r 466 (496)
+
T Consensus 436 ~ 436 (438)
T 2iwz_A 436 A 436 (438)
T ss_dssp E
T ss_pred e
Confidence 5
No 58
>1tqy_B Actinorhodin polyketide putative beta-ketoacyl SY; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1
Probab=99.58 E-value=1.2e-13 Score=144.80 Aligned_cols=310 Identities=15% Similarity=0.095 Sum_probs=182.7
Q ss_pred CCCceEEEEeeeecCCCCcccChHHHHHHHhhhhc--CCcchHHHHHHHHHHcCCCcee--ecCCC--CcCCCCCCchHH
Q 011007 84 KPRHVYLVDYACYKPPVTCRVPFATFMEHSRLILK--NNPKSVEFQMRILERSGLGEET--CLPPA--IHYIPPTPTMEA 157 (496)
Q Consensus 84 ~~~~v~Iv~~~~y~P~~~~~v~~~~~~e~~~~~~~--~~~~~~~f~~~i~~~sGi~~r~--~~~~~--~~~~~~~~~~~~ 157 (496)
..++|.|+|+||..|. . .+.+++.+.+.. +. +.+-. +| +..++..+. .++.- ....++. ...
T Consensus 7 ~~~~v~I~G~g~~~p~--g-~~~~~~w~~l~~-g~~~i~~~~-~~-----~~~~~~~~~~~~v~~fd~~~~~~~~--~~~ 74 (415)
T 1tqy_B 7 DDKSVLITGVGVVAPN--G-LGLAPYWSAVLD-GRHGLGPVT-RF-----DVSRYPATLAGQIDDFHAPDHIPGR--LLP 74 (415)
T ss_dssp ---CEEEEEEEEEETT--E-ESHHHHHHHHHT-TCCCEEECT-TT-----TGGGSSCCEEECCCSCCHHHHSCTT--TGG
T ss_pred CCCCEEEEeeEEECCC--C-CCHHHHHHHHHc-CCCcEEECC-cc-----cccCCCcceEEEeCCCCchhcCCHH--HHH
Confidence 4467999999999998 3 577888876542 11 00000 00 001111111 01000 0001110 011
Q ss_pred HHHhHHHHHHHHHHHHHHHcCCCcCCcC----EEEeeccC-C--------------------------CCCCcHHHHHHH
Q 011007 158 ARGEAELVIFSAMDSLLQKTGLKPKDID----ILIVNCSL-F--------------------------SPTPSLSAMVIN 206 (496)
Q Consensus 158 ~~~ea~~la~~Aa~~aL~~agi~p~dID----~LI~~ss~-~--------------------------~~~Ps~a~~I~~ 206 (496)
.......|+.+|++++|+++|+++++|| .+++.++. + +..+..+.+|+.
T Consensus 75 ~~d~~~~l~l~aa~~AL~dAGl~~~~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~ 154 (415)
T 1tqy_B 75 QTDPSTRLALTAADWALQDAKADPESLTDYDMGVVTANACGGFDFTHREFRKLWSEGPKSVSVYESFAWFYAVNTGQISI 154 (415)
T ss_dssp GCCHHHHHHHHHHHHHHHHTTCCGGGSCGGGEEEEEECSSCSHHHHHHHHHHHHHTCGGGSCTTHHHHSSTTHHHHHHHH
T ss_pred hcCHHHHHHHHHHHHHHHHcCCCccccCCCCEEEEEeeCCccHHHHHHHHHHHHhcCcccCChhhhhcccchHHHHHHHH
Confidence 1223678999999999999999999999 78777652 2 134678999999
Q ss_pred HcCCCCCceeeEecCCCcchHHHHHHHHHHHHhcCCCCEEEEEEECC-CCCC--------------------CccCCCcc
Q 011007 207 KYKLRSNIKSFNLSGMGCSAGLISIDLARDLLQVHPNSNAVVVSTEI-ITPN--------------------YYQGNERA 265 (496)
Q Consensus 207 ~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL~~~~~~~aLVVs~E~-~s~~--------------------~~~~~dr~ 265 (496)
+||++ .++++++ .+|++++.||..|.++|++| .+.|||+++|. ++.. ..+..++.
T Consensus 155 ~lgl~--gp~~~v~-~aCsS~l~Al~~A~~~I~~G-~d~~LvgG~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~pfd~~~ 230 (415)
T 1tqy_B 155 RHGMR--GPSSALV-AEQAGGLDALGHARRTIRRG-TPLVVSGGVDSALDPWGWVSQIASGRISTATDPDRAYLPFDERA 230 (415)
T ss_dssp HHTCC--SSCEEEE-CGGGHHHHHHHHHHHHHHHT-CSEEEEEEEECCCSHHHHHHHHTTSCBCCCSCGGGSCCTTSTTC
T ss_pred HhCCC--CceEeec-CCccHHHHHHHHHHHHHHcC-CCEEEEeeecCcCCHHHHHHHHhccCccCCCCCCCCcCCCCCCC
Confidence 99997 3799999 69999999999999999999 99999999998 3320 00001111
Q ss_pred ccccccccccccEEEEEeccCCcccc---cc-eeEeeEEEEEecCCcccccceeecccCCCceeeeechhHHHHHHHHhh
Q 011007 266 MLLPNCLFRMGGAAILLSNRRRNRSR---AK-YRLVHVVRTHKGADDKAYRCVFEEEDKEGKVGISLSKDLMAIAGEALK 341 (496)
Q Consensus 266 ~l~~~~lfgDGAaA~lLs~~~~~~~~---~~-~~L~~~~~t~~~~d~~~~~~~~~~~d~~G~~g~~ls~d~~~v~g~~l~ 341 (496)
..+++||||+|+||++.+.-.++ .. .++.+ +....|+.. +..+.. + ..
T Consensus 231 ---~G~~~geGaaavvL~~~~~A~~~g~~~i~a~I~g---~~~~~dg~~---~~~p~~--~---------~~-------- 282 (415)
T 1tqy_B 231 ---AGYVPGEGGAILVLEDSAAAEARGRHDAYGELAG---CASTFDPAP---GSGRPA--G---------LE-------- 282 (415)
T ss_dssp ---CCBCBBCEEEEEEEEEHHHHHHHTCCCCSEEEEE---EEEEECCCT---TCCCCC--S---------HH--------
T ss_pred ---CCcceeeeEEEEEECcHHHHHHCCCCceEEEEEE---EEEccCCCC---CCCCCH--H---------HH--------
Confidence 35799999999999875431111 01 12222 222233321 111100 0 00
Q ss_pred hhhhhcCCCccchhHHHHHHHHHHHHhhhcc-ccCCcccchhccccEEEeccCCHHHHHHH-----HHHcCCChhhHhhh
Q 011007 342 SNITTIGPLVLPASEQLLFLMTLIGRKIFNP-KWKPYIPDFKQAFEHFCIHAGGRAVIDEL-----QKNLQLSAEHVEAS 415 (496)
Q Consensus 342 ~~i~~~gp~vlp~~e~~~~~~~~~~~~v~~~-~~~~~~p~~~~did~f~~H~~~~~v~~~i-----~~~Lgl~~e~~~~S 415 (496)
...++.++. .+. .+|||++..|..+..+-|.+ .+.++-..-.+
T Consensus 283 ----------------------~ai~~al~~Agl~------~~dId~ve~Hgtgt~~~D~~E~~al~~~~g~~~~~v--- 331 (415)
T 1tqy_B 283 ----------------------RAIRLALNDAGTG------PEDVDVVFADGAGVPELDAAEARAIGRVFGREGVPV--- 331 (415)
T ss_dssp ----------------------HHHHHHHHHHTCC------GGGCCEEECCCCCSHHHHHHHHHHHHHHHCTTCSEE---
T ss_pred ----------------------HHHHHHHHHcCCC------HhHCCEEEEeCCCCcCcCHHHHHHHHHHhCCCCceE---
Confidence 011333332 333 38999999999887755543 34444321111
Q ss_pred hhhhcccCCccCCchHHHHHHH---HHhCCC------------------------CCCCEEEEEeechhHhhhheeeEee
Q 011007 416 RMTLHRFGNTSSSSLWYEMSYI---EEKGRM------------------------KKGDRVWQIAFGSGFKCNSAVWKCN 468 (496)
Q Consensus 416 ~~~l~r~GNtsSaSi~~~La~~---~~~g~i------------------------~~Gd~Vll~~fG~G~~~~sav~r~~ 468 (496)
-.+-..+||+.+|+=...+..+ ++++.+ ....+++.-+||.|-+..++|++.-
T Consensus 332 ~s~K~~~GH~~gAaG~~~~~~~~~~l~~~~ipp~~~~~~~~p~~~~~~v~~~~~~~~~~~a~~~sfGfgG~n~~~vl~~~ 411 (415)
T 1tqy_B 332 TVPKTTTGRLYSGGGPLDVVTALMSLREGVIAPTAGVTSVPREYGIDLVLGEPRSTAPRTALVLARGRWGFNSAAVLRRF 411 (415)
T ss_dssp ECGGGGTCBCGGGHHHHHHHHHHHHHHHTSBCCBCSCCCCCGGGCCEECBSSCBCCCCSEEEEEEEETTTEEEEEEEEEC
T ss_pred eccchhhccChHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCccccCCCCccCCCCEEEEecCcCCCeEEEEEEecC
Confidence 1123347999999876666553 333321 1346788899998888778887753
No 59
>1ulq_A Putative acetyl-COA acetyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 3.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1
Probab=99.58 E-value=4.9e-14 Score=147.11 Aligned_cols=94 Identities=11% Similarity=0.229 Sum_probs=85.6
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEeecc-CCCC-CCcHHHHHHHHcCCCCCceeeEecCCCcchHHHHHHHHHHHHh
Q 011007 162 AELVIFSAMDSLLQKTGLKPKDIDILIVNCS-LFSP-TPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLLQ 239 (496)
Q Consensus 162 a~~la~~Aa~~aL~~agi~p~dID~LI~~ss-~~~~-~Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL~ 239 (496)
+.+|+.+|++++|+++|++|+|||.|++.++ +++. .|..+.+|+.++|++.+.++++++ .+|++++.||..|.++|+
T Consensus 26 ~~~L~~~Aa~~Al~dAgl~~~~id~v~~g~~~~~~~~~~~~a~~va~~lGl~~~~p~~~v~-~aCas~~~Al~~A~~~I~ 104 (401)
T 1ulq_A 26 PDDLLAHALSVLVDRSGVPKEEVEDVYAGCANQAGEDNRNVARMALLLAGFPVEVAGCTVN-RLCGSGLEAVAQAARAIW 104 (401)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCSSTTTTTHHHHHHHHTTCCTTCEEEEEE-CGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCCCCChHHHHHHHHhCCCCCccEeecc-ccchHHHHHHHHHHHHHH
Confidence 6789999999999999999999999998875 4444 688999999999997578999999 699999999999999999
Q ss_pred cCCCCEEEEEEECCCCC
Q 011007 240 VHPNSNAVVVSTEIITP 256 (496)
Q Consensus 240 ~~~~~~aLVVs~E~~s~ 256 (496)
+|..+.|||+++|.++.
T Consensus 105 ~G~~d~vLv~G~e~~s~ 121 (401)
T 1ulq_A 105 AGEGKVYIGSGVESMSR 121 (401)
T ss_dssp TTSCSEEEEEEEEESSS
T ss_pred CCCCCEEEEEEEeecCC
Confidence 99999999999998764
No 60
>4ewg_A Beta-ketoacyl synthase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, transferase; 2.25A {Burkholderia phymatum}
Probab=99.57 E-value=4.2e-14 Score=148.12 Aligned_cols=313 Identities=12% Similarity=0.079 Sum_probs=184.5
Q ss_pred CceEEEEeeeecCCCCcccChHHHHHHHhhhh-cCCcchHHHHHHHHHHc-CCCceeecCCCCcCCCCCCchHHHH--Hh
Q 011007 86 RHVYLVDYACYKPPVTCRVPFATFMEHSRLIL-KNNPKSVEFQMRILERS-GLGEETCLPPAIHYIPPTPTMEAAR--GE 161 (496)
Q Consensus 86 ~~v~Iv~~~~y~P~~~~~v~~~~~~e~~~~~~-~~~~~~~~f~~~i~~~s-Gi~~r~~~~~~~~~~~~~~~~~~~~--~e 161 (496)
++|.|+++||..|.. .+.+++.+.+..-. .+.+-. + .+.. ++..+....-.....+...+-.+++ ..
T Consensus 6 ~~v~ItG~g~~~p~g---~~~~~~w~~l~~g~~~i~~~~-----~-~~~~~~~~~~~~~~v~~fd~~~~i~~~~~~~~d~ 76 (412)
T 4ewg_A 6 KRVVITGMGGVTALG---SRWDEIEAALKAGRNAVRRMP-----D-WDYFESLHTRLAAPLPGFAQPADWPRKKTRSMGR 76 (412)
T ss_dssp CCEEEEEEEEEBTTB---SSHHHHHHHHHHTCCCCEECG-----G-GGGSSSCCCCEEBCCSCCCCCTTSCHHHHTTCCH
T ss_pred CEEEEEeeEEECCCc---CCHHHHHHHHHcCCCceeeCC-----c-cccccCCccceeeecCCCChhhhCCHHHHhhCCH
Confidence 579999999999983 57788887654210 011100 0 0111 2222221111111000001111111 23
Q ss_pred HHHHHHHHHHHHHHHcCC-CcCCcC----EEEeeccCC---------------------------CCCCcHHHHHHHHcC
Q 011007 162 AELVIFSAMDSLLQKTGL-KPKDID----ILIVNCSLF---------------------------SPTPSLSAMVINKYK 209 (496)
Q Consensus 162 a~~la~~Aa~~aL~~agi-~p~dID----~LI~~ss~~---------------------------~~~Ps~a~~I~~~Lg 209 (496)
...|+.+|++++|+++|+ ++++|| .+++.++.. +..+..+.+|+..||
T Consensus 77 ~~~l~l~aa~~Al~dAGl~~~~~i~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 156 (412)
T 4ewg_A 77 VSMYAVRASELALADAGFAGDESISDGRMGVAYGSSSGSVEPIRAFGTMLESGSMTDVTSNSYVQMMPHTTAVNVSLFWD 156 (412)
T ss_dssp HHHHHHHHHHHHHHHHTCTTCGGGGTTTEEEEEECSCCCHHHHHHHHHHHHHCCCTTCCTTHHHHHSTTHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHhcCCCCccccCccceEEEEeccCCchHHHHHHHHHHHhcCcccCChhhhhhhcccHHHHHHHHHhC
Confidence 678999999999999999 778887 777765421 124567899999999
Q ss_pred CCCCceeeEecCCCcchHHHHHHHHHHHHhcCCCCEEEEEEECCCCCCCc---------c------------CCCccccc
Q 011007 210 LRSNIKSFNLSGMGCSAGLISIDLARDLLQVHPNSNAVVVSTEIITPNYY---------Q------------GNERAMLL 268 (496)
Q Consensus 210 l~~~~~~~dl~g~gCsg~l~al~lA~~lL~~~~~~~aLVVs~E~~s~~~~---------~------------~~dr~~l~ 268 (496)
++. ++++++ .+|++++.||..|.++|++|..+.|||+++|.++...+ . ..++.
T Consensus 157 l~g--p~~~v~-~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~~s~~~~~~~~~~~~l~~~~~~p~~~~rpfd~~~--- 230 (412)
T 4ewg_A 157 LKG--RIVPTS-SACASGSQAIGYAYENIAMGKQTLMLAGGAEELSGPAVAVFDTLYATSTRNDEPHLTPRPFDAKR--- 230 (412)
T ss_dssp CCS--CEEECC-CGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHHHHHHHHTTTCBCCCTTCGGGCCCTTBTTC---
T ss_pred CCC--Cccccc-chhHHHHHHHHHHHHHHHcCCCCEEEEeccccCCHHHHHHHHHhhccccCCCCCCCCCCCCCCCC---
Confidence 973 899999 69999999999999999999999999999998764110 0 01111
Q ss_pred cccccccccEEEEEeccCCcccccceeEe-eEEEEEecCCcccccceeecccCCCceeeeechhHHHHHHHHhhhhhhhc
Q 011007 269 PNCLFRMGGAAILLSNRRRNRSRAKYRLV-HVVRTHKGADDKAYRCVFEEEDKEGKVGISLSKDLMAIAGEALKSNITTI 347 (496)
Q Consensus 269 ~~~lfgDGAaA~lLs~~~~~~~~~~~~L~-~~~~t~~~~d~~~~~~~~~~~d~~G~~g~~ls~d~~~v~g~~l~~~i~~~ 347 (496)
..+++||||+|+||++.+.-.++ +-.+. .+..+....|+.. +..+ + +...
T Consensus 231 ~G~~~geGAaavvL~~~~~A~~~-g~~i~a~i~g~~~~~dg~~---~~~p-------------~-----~~~~------- 281 (412)
T 4ewg_A 231 DGLVVGEGAATLVLEEYEHAKAR-GATIHAEIVGFGCNSDGAH---MTQP-------------T-----ASTM------- 281 (412)
T ss_dssp CCBCBBCEEEEEEEEEHHHHHHT-TCCCCEEEEEEEEEECSSC---SSSC-------------C-----HHHH-------
T ss_pred CCCceECeEEEEEEccHHHHhhC-CCcEEEEEEEEEEcCCCCC---CCCC-------------C-----HHHH-------
Confidence 35789999999999975421111 00111 1222222233321 1111 0 0000
Q ss_pred CCCccchhHHHHHHHHHHHHhhhcc-ccCCcccchhccccEEEeccCCHHHHHHHH-----HHcCCChhhHhhhhhhhcc
Q 011007 348 GPLVLPASEQLLFLMTLIGRKIFNP-KWKPYIPDFKQAFEHFCIHAGGRAVIDELQ-----KNLQLSAEHVEASRMTLHR 421 (496)
Q Consensus 348 gp~vlp~~e~~~~~~~~~~~~v~~~-~~~~~~p~~~~did~f~~H~~~~~v~~~i~-----~~Lgl~~e~~~~S~~~l~r 421 (496)
....++.++. .+. .+|||++..|..+...-|.++ +.++-.. .+ -.+-..
T Consensus 282 ---------------~~ai~~Al~~Agl~------~~dId~ve~Hgtgt~~~D~~E~~al~~~~~~~~-~v---~s~K~~ 336 (412)
T 4ewg_A 282 ---------------ARAMQLALEDAKLD------ANAIAYVNAHGTSTDRGDVAESQATARTFGERM-PI---SSLKSY 336 (412)
T ss_dssp ---------------HHHHHHHHHHTTCC------GGGEEEEECCCCCCHHHHHHHHHHHHHHHCTTC-EE---ECTHHH
T ss_pred ---------------HHHHHHHHHHcCCC------HHHCCEEEccCCCCccccHHHHHHHHHHcCCCC-ee---eCcccc
Confidence 0112334432 343 389999999998877665443 4444210 11 123334
Q ss_pred cCCccCCchHHHHHHH---HHhCCC-------------------------CCCCEEEEEeechhHhhhheeeEe
Q 011007 422 FGNTSSSSLWYEMSYI---EEKGRM-------------------------KKGDRVWQIAFGSGFKCNSAVWKC 467 (496)
Q Consensus 422 ~GNtsSaSi~~~La~~---~~~g~i-------------------------~~Gd~Vll~~fG~G~~~~sav~r~ 467 (496)
+||+.+|+=...+... ++++.+ .+.++++.-+||-|-+..++|++.
T Consensus 337 ~GH~~gAsG~~~~~~~~~~l~~~~ipp~~~~~~~~p~~~~~~~v~~~~~~~~~~~~~~~sfgfGG~na~~vl~~ 410 (412)
T 4ewg_A 337 VGHTLGACGALEAWWTIEMMKRNWYAPTLNLTEVDPACAPLDYIRGEARAIDAEYVMSNNFAFGGINTSLIFRR 410 (412)
T ss_dssp HCBCGGGHHHHHHHHHHHHHHHTEECCCTTCCSBCTTSCCCEECCSSCEECCCSEEEEEEEEGGGEEEEEEEEC
T ss_pred ccccHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCcccccccccCcccCCCCCEEEEeeecCCcceEEEEEee
Confidence 7999988855555432 333211 234678889999998888888874
No 61
>2vu1_A Acetyl-COA acetyltransferase; acyltransferase, PHB biosynthesis, thiolase FOL; HET: CSO OPI; 1.51A {Zoogloea ramigera} PDB: 1nl7_A* 1ou6_A* 2vu0_A* 1m4s_A* 2vu2_A* 2wkv_A* 2wku_A* 1m1t_A 1m3k_A 1m1o_A 1m3z_A* 2vtz_A* 2wl5_A* 2wkt_A* 2wl4_A* 1m4t_A* 2wl6_A 1qfl_A* 1dlv_A* 1dlu_A* ...
Probab=99.56 E-value=8.7e-14 Score=144.78 Aligned_cols=94 Identities=14% Similarity=0.208 Sum_probs=85.0
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEeeccC-CCCCCcHHHHHHHHcCCCCCceeeEecCCCcchHHHHHHHHHHHHhc
Q 011007 162 AELVIFSAMDSLLQKTGLKPKDIDILIVNCSL-FSPTPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLLQV 240 (496)
Q Consensus 162 a~~la~~Aa~~aL~~agi~p~dID~LI~~ss~-~~~~Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL~~ 240 (496)
..+|+.+|++++|+++|+++++||.+++.+.. ....+..+.+|+.++|+++..++++++ .+|++++.||..|.+.|++
T Consensus 27 ~~~L~~~a~~~Al~dAgl~~~~id~~~~g~~~~~~~~~~~a~~ia~~lgl~~~~p~~~v~-~aCaSgl~Al~~A~~~I~~ 105 (392)
T 2vu1_A 27 AHELGATVISAVLERAGVAAGEVNEVILGQVLPAGEGQNPARQAAMKAGVPQEATAWGMN-QLCGSGLRAVALGMQQIAT 105 (392)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCTTSCSCHHHHHHHHTTCCTTSEEEEEE-CGGGHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCcHHHHHHHHHcCCCCCceEEEec-ccchHHHHHHHHHHHHHHC
Confidence 57899999999999999999999999988653 445678999999999998558999999 6999999999999999999
Q ss_pred CCCCEEEEEEECCCCC
Q 011007 241 HPNSNAVVVSTEIITP 256 (496)
Q Consensus 241 ~~~~~aLVVs~E~~s~ 256 (496)
|..+.|||+++|.+|.
T Consensus 106 G~~d~vlvgG~e~~s~ 121 (392)
T 2vu1_A 106 GDASIIVAGGMESMSM 121 (392)
T ss_dssp TSCSCEEEEEEEESTT
T ss_pred CCCCEEEEEEEeccCC
Confidence 9999999999998764
No 62
>2vba_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; cytoplasm, antibiotic, transferase, amino-thiazole, acyltransferase, lipid synthesis; HET: P4T; 1.36A {Escherichia coli} SCOP: c.95.1.1 c.95.1.1 PDB: 1fj4_A* 1g5x_A 2aq7_A* 1fj8_A* 2aqb_A 2bui_A 2buh_A 2vb7_A* 2vb8_A 2vb9_A* 1h4f_A 1dd8_A 2cdh_A 2bz4_A 2byz_A 2bz3_A* 2byy_A* 1f91_A* 2cf2_A 2byw_A ...
Probab=99.55 E-value=2.5e-13 Score=141.94 Aligned_cols=311 Identities=14% Similarity=0.145 Sum_probs=184.4
Q ss_pred CceEEEEeeeecCCCCcccChHHHHHHHhhhhcCCcchHHHHHHHHHHcCCCceeecCCCCcCCCCCCchHHHH--HhHH
Q 011007 86 RHVYLVDYACYKPPVTCRVPFATFMEHSRLILKNNPKSVEFQMRILERSGLGEETCLPPAIHYIPPTPTMEAAR--GEAE 163 (496)
Q Consensus 86 ~~v~Iv~~~~y~P~~~~~v~~~~~~e~~~~~~~~~~~~~~f~~~i~~~sGi~~r~~~~~~~~~~~~~~~~~~~~--~ea~ 163 (496)
++|.|+++||..|. . .+.+++.+.+.. ++=.-..+. + ++..++..+....-+ .....-.+-++++ ....
T Consensus 2 ~~v~ItG~g~~~p~--g-~~~~~~w~~l~~-g~~~i~~~~---~-~~~~~~~~~~~~~v~-fd~~~~~~~~~~~~~d~~~ 72 (406)
T 2vba_A 2 KRAVITGLGIVSSI--G-NNQQEVLASLRE-GRSGITFSQ---E-LKDSGMRSHVWGNVK-LDTTGLIDRKVVRFMSDAS 72 (406)
T ss_dssp CCEEEEEEEEEBTT--B-SSHHHHHHHHHH-TCCCEEECH---H-HHHTTCSCCEEECCC-CCCTTSSCHHHHTTCCHHH
T ss_pred CCEEEEeeEEECCC--C-CCHHHHHHHHHc-CCCeEEeCC---c-ccccCCccceEEEec-CChhhcCCHHHHHhcCHHH
Confidence 36999999999998 3 677888876542 210000010 1 122333332221100 1000001111111 2267
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCE-----EEeeccC-CC---------------------------CCCcHHHHHHHHcCC
Q 011007 164 LVIFSAMDSLLQKTGLKPKDIDI-----LIVNCSL-FS---------------------------PTPSLSAMVINKYKL 210 (496)
Q Consensus 164 ~la~~Aa~~aL~~agi~p~dID~-----LI~~ss~-~~---------------------------~~Ps~a~~I~~~Lgl 210 (496)
+|+.+|++++|+++|+++++||. |+++++. ++ ..+..+.+|+..||+
T Consensus 73 ~l~l~aa~~Al~dAg~~~~~i~~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lgl 152 (406)
T 2vba_A 73 IYAFLSMEQAIADAGLSPEAYQNNPRVGLIAGSGGGSPRFQVFGADAMRGPRGLKAVGPYVVTKAMASGVSACLATPFKI 152 (406)
T ss_dssp HHHHHHHHHHHHHHTCCHHHHTTCTTEEEEEECSSCCHHHHHHHHHHHTSTTTHHHHCTTHHHHHSTTHHHHHHHTTTTC
T ss_pred HHHHHHHHHHHHHCCCChhHcCCCCCEEEEEEECCcchHHHHHHHHHHHhccCccccChhhhhhhhhHHHHHHHHHhccC
Confidence 89999999999999999988875 7776542 21 123578899999999
Q ss_pred CCCceeeEecCCCcchHHHHHHHHHHHHhcCCCCEEEEEEECCCCCCC---------cc--------C----CCcccccc
Q 011007 211 RSNIKSFNLSGMGCSAGLISIDLARDLLQVHPNSNAVVVSTEIITPNY---------YQ--------G----NERAMLLP 269 (496)
Q Consensus 211 ~~~~~~~dl~g~gCsg~l~al~lA~~lL~~~~~~~aLVVs~E~~s~~~---------~~--------~----~dr~~l~~ 269 (496)
+ -++++++ .+|++++.||..|.++|++|..+.|||+++|.++..+ .. + -|+. -.
T Consensus 153 ~--Gp~~~v~-taCsS~l~Al~~A~~~I~~G~~d~alvgG~e~~~~~~~~~~~~~~~ls~~~~~~p~~~~~pfd~~--~~ 227 (406)
T 2vba_A 153 H--GVNYSIS-SACATSAHCIGNAVEQIQLGKQDIVFAGGGEELCWEMACEFDAMGALSTKYNDTPEKASRTYDAH--RD 227 (406)
T ss_dssp C--SCEEEEE-CGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHHHHHHHHHTTCBCCSCTTSGGGSCCTTBTT--CC
T ss_pred C--Cceeeec-cchhHHHHHHHHHHHHHHcCCCCEEEEeeeccccChHHHHHhhccccccccCCCCccccCcCcCC--CC
Confidence 7 3899999 6999999999999999999999999999999865310 00 0 0111 13
Q ss_pred ccccccccEEEEEeccCCcccc--cce-eEeeEEEEEecCCcccccceeecccCCCceeeeechhHHHHHHHHhhhhhhh
Q 011007 270 NCLFRMGGAAILLSNRRRNRSR--AKY-RLVHVVRTHKGADDKAYRCVFEEEDKEGKVGISLSKDLMAIAGEALKSNITT 346 (496)
Q Consensus 270 ~~lfgDGAaA~lLs~~~~~~~~--~~~-~L~~~~~t~~~~d~~~~~~~~~~~d~~G~~g~~ls~d~~~v~g~~l~~~i~~ 346 (496)
.+++||||+|+||++.+.-.++ ..| ++. .+....|+.. +..+. + .+
T Consensus 228 G~v~gEGaaavvL~~~~~A~~~g~~i~a~I~---g~~~~~dg~~---~t~p~---~-------------~~--------- 276 (406)
T 2vba_A 228 GFVIAGGGGMVVVEELEHALARGAHIYAEIV---GYGATSDGAD---MVAPS---G-------------EG--------- 276 (406)
T ss_dssp SBCBBCEEEEEEEEEHHHHHHTTCCCCEEEE---EEEEEECCSC---TTSCC---S-------------HH---------
T ss_pred ceEeeceEEEEEeCcHHHHHHCCCeEEEEEE---EEEEcCCCCC---CCCCC---H-------------HH---------
Confidence 5789999999999875431111 111 222 2222233321 11110 0 00
Q ss_pred cCCCccchhHHHHHHHHHHHHhhhccccCCcccchhccccEEEeccCCHHHHHH-----HHHHcCCChhhHhhhhhhhcc
Q 011007 347 IGPLVLPASEQLLFLMTLIGRKIFNPKWKPYIPDFKQAFEHFCIHAGGRAVIDE-----LQKNLQLSAEHVEASRMTLHR 421 (496)
Q Consensus 347 ~gp~vlp~~e~~~~~~~~~~~~v~~~~~~~~~p~~~~did~f~~H~~~~~v~~~-----i~~~Lgl~~e~~~~S~~~l~r 421 (496)
+ ....++.++.+ . +|||++..|..+..+-|. +.+.+|...-.+ -.+-..
T Consensus 277 ----------~-----~~ai~~al~~a-----g---~dId~ve~HgtgT~~gD~~E~~al~~~fg~~~~~v---~s~K~~ 330 (406)
T 2vba_A 277 ----------A-----VRCMKMAMHGV-----D---TPIDYLNSHGTSTPVGDVKELAAIREVFGDKSPAI---SATKAM 330 (406)
T ss_dssp ----------H-----HHHHHHHHTTC-----C---SCCCEEECCCCSCHHHHHHHHHHHHHHHTTCCCEE---ECTHHH
T ss_pred ----------H-----HHHHHHHHhhC-----C---CCccEEEeeCccCcccCHHHHHHHHHHhCcCCCce---eCchhh
Confidence 0 01123344322 2 789999999998776443 455566432112 123445
Q ss_pred cCCccCCchHHHHHHH---HHhCCCC------------------------CCCEEEEEeechhHhhhheeeEe
Q 011007 422 FGNTSSSSLWYEMSYI---EEKGRMK------------------------KGDRVWQIAFGSGFKCNSAVWKC 467 (496)
Q Consensus 422 ~GNtsSaSi~~~La~~---~~~g~i~------------------------~Gd~Vll~~fG~G~~~~sav~r~ 467 (496)
+||+.+|+-...+... ++++.+. +-.+++.-+||-|-+..++|++.
T Consensus 331 ~GH~~gAaG~~~~i~~~l~l~~~~ipp~~~~~~~~~~~~~~~~v~~~~~~~~~~a~~~sfGfgG~na~~vl~~ 403 (406)
T 2vba_A 331 TGHSLGAAGVQEAIYSLLMLEHGFIAPSINIEELDEQAAGLNIVTETTDRELTTVMSNSFGFGGTNATLVMRK 403 (406)
T ss_dssp HCBCGGGHHHHHHHHHHHHHHHTEECCCCCCSSBCTTCTTSEECCSCEECCCCEEEEEEEETTTEEEEEEEEC
T ss_pred hcccHHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCccccccCCcccCCCCCEEEEcCCCCCCeEEEEEEEe
Confidence 8999999887776654 3343311 12467778999888777777764
No 63
>1wl4_A Acetyl-coenzyme A acetyltransferase 2; thiolase fold; HET: COA; 1.55A {Homo sapiens} PDB: 1wl5_A
Probab=99.53 E-value=1.9e-13 Score=142.55 Aligned_cols=94 Identities=15% Similarity=0.188 Sum_probs=85.2
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEeeccC-CCCCCcHHHHHHHHcCCCCCceeeEecCCCcchHHHHHHHHHHHHhc
Q 011007 162 AELVIFSAMDSLLQKTGLKPKDIDILIVNCSL-FSPTPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLLQV 240 (496)
Q Consensus 162 a~~la~~Aa~~aL~~agi~p~dID~LI~~ss~-~~~~Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL~~ 240 (496)
+.+|+.+|++++|+++|+++++||.+++.++. ++..|..+..|+.++|++...++++++ .+|++++.||..|.++|++
T Consensus 30 ~~~L~~~a~~~Al~dAGl~~~~id~v~~g~~~~~~~~~~~a~~ia~~lgl~~~~p~~~v~-~aCaSg~~Ai~~A~~~I~~ 108 (397)
T 1wl4_A 30 VQDLGSTVIKEVLKRATVAPEDVSEVIFGHVLAAGCGQNPVRQASVGAGIPYSVPAWSCQ-MICGSGLKAVCLAVQSIGI 108 (397)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCTTSCSCHHHHHHHHTTCCTTSCEEEEC-CGGGHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCCHHHHHHHHHcCCCCCccEEEec-CcChhHHHHHHHHHHHHHC
Confidence 56899999999999999999999999988653 455688999999999996568999999 6999999999999999999
Q ss_pred CCCCEEEEEEECCCCC
Q 011007 241 HPNSNAVVVSTEIITP 256 (496)
Q Consensus 241 ~~~~~aLVVs~E~~s~ 256 (496)
|..+.+||+++|.++.
T Consensus 109 G~~d~vlagG~e~~s~ 124 (397)
T 1wl4_A 109 GDSSIVVAGGMENMSK 124 (397)
T ss_dssp TSCSEEEEEEEEESTT
T ss_pred CCCCEEEEEEEeecCC
Confidence 9999999999998773
No 64
>1afw_A 3-ketoacetyl-COA thiolase; fatty acid metabolism; 1.80A {Saccharomyces cerevisiae} SCOP: c.95.1.1 c.95.1.1 PDB: 1pxt_A
Probab=99.52 E-value=2.8e-13 Score=141.06 Aligned_cols=93 Identities=10% Similarity=0.145 Sum_probs=84.5
Q ss_pred HHHHHHHHHHHHHHHcC----CCcCCcCEEEeecc-CCCCCCcHHHHHHHHcCCCCCceeeEecCCCcchHHHHHHHHHH
Q 011007 162 AELVIFSAMDSLLQKTG----LKPKDIDILIVNCS-LFSPTPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARD 236 (496)
Q Consensus 162 a~~la~~Aa~~aL~~ag----i~p~dID~LI~~ss-~~~~~Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~ 236 (496)
+.+|+.+|++++|+++| +++++||.+++.++ +++..|..+.+|+.++|++.+.++++++ .+|++++.||..|.+
T Consensus 35 ~~~La~~Aa~~Al~~Ag~~~~l~~~~id~v~~g~~~~~~~~~~~a~~va~~lGl~~~~p~~~v~-~aCasg~~Al~~A~~ 113 (393)
T 1afw_A 35 TDYLLYNFLNEFIGRFPEPLRADLNLIEEVACGNVLNVGAGATEHRAACLASGIPYSTPFVALN-RQCSSGLTAVNDIAN 113 (393)
T ss_dssp HHHHHHHHHHHHHHTSCHHHHTCGGGCCCEEEECSSSBGGGHHHHHHHHHHTTCCTTSCEEEEE-CGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCHHHCCEEEEEecCCCCCCChHHHHHHHHcCCCCCceEEEEc-CcCHHHHHHHHHHHH
Confidence 67899999999999999 99999999998875 4555678899999999996568999999 699999999999999
Q ss_pred HHhcCCCCEEEEEEECCCC
Q 011007 237 LLQVHPNSNAVVVSTEIIT 255 (496)
Q Consensus 237 lL~~~~~~~aLVVs~E~~s 255 (496)
+|++|..+.+||+++|.++
T Consensus 114 ~I~~G~~d~vLv~G~e~~s 132 (393)
T 1afw_A 114 KIKVGQIDIGLALGVESMT 132 (393)
T ss_dssp HHHTTSCSEEEEEEEEEHH
T ss_pred HHHCCCCCEEEEEEEEecC
Confidence 9999999999999999765
No 65
>3mqd_A Beta-ketoacyl synthase; ssgcid, ALS collaborative crystallography, beta-ketoacyl SYN brucella melitensis, fragments of LIFE; HET: 3MQ; 1.25A {Brucella melitensis biovar abortus} PDB: 3lrf_A* 3u0e_A* 3u0f_A*
Probab=99.51 E-value=3.6e-13 Score=141.74 Aligned_cols=313 Identities=14% Similarity=0.133 Sum_probs=186.9
Q ss_pred CceEEEEeeeecCCCCcccChHHHHHHHhhhhcCCcchHHHHHHHHHHcCCCceeecCCCCc---CCCCCCchHHHHHhH
Q 011007 86 RHVYLVDYACYKPPVTCRVPFATFMEHSRLILKNNPKSVEFQMRILERSGLGEETCLPPAIH---YIPPTPTMEAARGEA 162 (496)
Q Consensus 86 ~~v~Iv~~~~y~P~~~~~v~~~~~~e~~~~~~~~~~~~~~f~~~i~~~sGi~~r~~~~~~~~---~~~~~~~~~~~~~ea 162 (496)
++|.|+|+||..|.. .+.+++.+.+.. +.=.-..+. + ++..++..+....++.. ..++ .........
T Consensus 23 ~~V~ItG~g~~~p~g---~~~~~~w~~l~~-g~~~i~~~~---~-~~~~~~~~~~~g~~~fd~~~~i~~--~~~~~~d~~ 92 (428)
T 3mqd_A 23 RRVVVTGMGIVSSIG---SNTEEVTASLRE-AKSGISRAE---E-YAELGFRCQVHGAPDIDIESLVDR--RAMRFHGRG 92 (428)
T ss_dssp CCEEEEEEEEEBTTB---SSHHHHHHHHHH-TCCCEEECH---H-HHHTTCSCCEEECCCCCHHHHSCT--GGGTTCCHH
T ss_pred CCEEEEeeEEECCCc---CCHHHHHHHHHc-CCCcceeCC---c-ccccCCCcccccccCCChhhcCCH--HHHhhCCHH
Confidence 579999999999983 678888887653 110000110 1 23345544332211110 0111 001111237
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcC----EEEeeccC-CC--------------------------CCCcHHHHHHHHcCCC
Q 011007 163 ELVIFSAMDSLLQKTGLKPKDID----ILIVNCSL-FS--------------------------PTPSLSAMVINKYKLR 211 (496)
Q Consensus 163 ~~la~~Aa~~aL~~agi~p~dID----~LI~~ss~-~~--------------------------~~Ps~a~~I~~~Lgl~ 211 (496)
.+|+..|++++|+++|+++++|| .+++.++. ++ ..+..+.+|+..||++
T Consensus 93 ~~l~~~aa~~Al~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~ 172 (428)
T 3mqd_A 93 TAWNHIAMDQAIADAGLTEEEVSNERTGIIMGSGGPSTRTIVDSADITREKGPKRVGPFAVPKAMSSTASATLATFFKIK 172 (428)
T ss_dssp HHHHHHHHHHHHHHHTCCHHHHSSTTEEEEEEESSCCHHHHHHHHHHHHHHCGGGGCTTCHHHHSTTHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHcCCChhHccccceEEEEccCCCchHHHHHHHHHHHhcCccccCchhhccccccHHHHHHHHHcCCC
Confidence 88999999999999999999998 57766542 21 1356789999999996
Q ss_pred CCceeeEecCCCcchHHHHHHHHHHHHhcCCCCEEEEEEECCCCCCCc----------------------cCCCcccccc
Q 011007 212 SNIKSFNLSGMGCSAGLISIDLARDLLQVHPNSNAVVVSTEIITPNYY----------------------QGNERAMLLP 269 (496)
Q Consensus 212 ~~~~~~dl~g~gCsg~l~al~lA~~lL~~~~~~~aLVVs~E~~s~~~~----------------------~~~dr~~l~~ 269 (496)
.++++++ .+|++++.||..|.++|++|..+.|||+++|.++.... +..++. .
T Consensus 173 --gp~~tv~-~aCsSgl~Ai~~A~~~I~~G~~d~alvgG~e~~s~~~~~~~~~~~~ls~~~~~~p~~~~rpfd~~~---~ 246 (428)
T 3mqd_A 173 --GINYSIS-SACATSNHCIGNAYEMIQYGKQDRMFAGGCEDLDWTLSVLFDAMGAMSSKYNDTPSTASRAYDKNR---D 246 (428)
T ss_dssp --SCEECCC-CGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHHHHHHHHHTTCBCCTTTTSGGGSCCTTBTTC---C
T ss_pred --Cceeeec-CccHHHHHHHHHHHHHHHcCCCCEEEEEeecccchHHHHHHHHhhhhcccccCCcccccCcccCCC---C
Confidence 4899999 69999999999999999999999999999998763110 001111 3
Q ss_pred ccccccccEEEEEeccCCcccccceeEe-eEEEEEecCCcccccceeecccCCCceeeeechhHHHHHHHHhhhhhhhcC
Q 011007 270 NCLFRMGGAAILLSNRRRNRSRAKYRLV-HVVRTHKGADDKAYRCVFEEEDKEGKVGISLSKDLMAIAGEALKSNITTIG 348 (496)
Q Consensus 270 ~~lfgDGAaA~lLs~~~~~~~~~~~~L~-~~~~t~~~~d~~~~~~~~~~~d~~G~~g~~ls~d~~~v~g~~l~~~i~~~g 348 (496)
.+++||||+|+||++.+.-.++ +-.+. .+..+....|+.. +..+ .+ .+
T Consensus 247 G~v~gEGAaavvL~~~~~A~~~-g~~i~a~I~g~~~~~dg~~---~~~P---~~-------------~~----------- 295 (428)
T 3mqd_A 247 GFVIAGGAGVLVLEDLETALAR-GAKIYGEIVGYGATSDGYD---MVAP---SG-------------EG----------- 295 (428)
T ss_dssp SBCBBCEEEEEEEEEHHHHHHT-TCCCCEEEEEEEEEECCSC---SSSC---CS-------------HH-----------
T ss_pred CcccccceEEEEEccHHHHHhC-CCcEEEEEEEEEEcCCCCC---CCCC---CH-------------HH-----------
Confidence 5789999999999975421111 00111 1222222333321 1111 00 00
Q ss_pred CCccchhHHHHHHHHHHHHhhhccccCCcccchhccccEEEeccCCHHHHHHH-----HHHcCCChhhHhhhhhhhcccC
Q 011007 349 PLVLPASEQLLFLMTLIGRKIFNPKWKPYIPDFKQAFEHFCIHAGGRAVIDEL-----QKNLQLSAEHVEASRMTLHRFG 423 (496)
Q Consensus 349 p~vlp~~e~~~~~~~~~~~~v~~~~~~~~~p~~~~did~f~~H~~~~~v~~~i-----~~~Lgl~~e~~~~S~~~l~r~G 423 (496)
+ ....++.++ . +. +|||++-.|..+-.+-|.+ .+.++...+.+ +--.+=..+|
T Consensus 296 --------~-----~~ai~~Al~-g----l~---~dId~ve~HgtgT~~~D~~E~~al~~~~~~~~~~~-~v~s~K~~~G 353 (428)
T 3mqd_A 296 --------A-----IRCMKMALS-T----VT---SKIDYINPHATSTPAGDAPEIEAIRQIFGAGDVCP-PIAATKSLTG 353 (428)
T ss_dssp --------H-----HHHHHHHHT-T----CC---SCCCEEECCCCSCHHHHHHHHHHHHHHHCSGGGSC-CBCCTHHHHC
T ss_pred --------H-----HHHHHHHHh-C----Cc---cccCEEEEeCCCCCCcCHHHHHHHHHHhcccCCCc-eeecchhhhc
Confidence 0 011234444 2 22 7999999998887765554 45566433222 1112233479
Q ss_pred CccCCchHHHHHHH---HHhCCC-------------------------CCCCEEEEEeechhHhhhheeeEe
Q 011007 424 NTSSSSLWYEMSYI---EEKGRM-------------------------KKGDRVWQIAFGSGFKCNSAVWKC 467 (496)
Q Consensus 424 NtsSaSi~~~La~~---~~~g~i-------------------------~~Gd~Vll~~fG~G~~~~sav~r~ 467 (496)
|+-+|+=...+..+ ++++.+ .+-.+++.-+||-|-+-.++|++.
T Consensus 354 H~~gAsG~~~~i~~~~~l~~~~ipp~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~sfGfGG~Na~~vl~~ 425 (428)
T 3mqd_A 354 HSLGATGVQEAIYSLLMMQNNFICESAHIEELDPAFADMPIVRKRIDNVQLNTVLSNSFGFGGTNATLVFQR 425 (428)
T ss_dssp BCGGGHHHHHHHHHHHHHHHTEECCCTTCSSBCGGGTTSCBCSSCEESCCCCEEEEEEEETTTEEEEEEEEC
T ss_pred ccHHHHHHHHHHHHHHHHHhCCcCCCCCCCCCCcccccCCccCCccccCCCCEEEEecCcCCcceEEEEEee
Confidence 99998876665543 333322 123567788999887777777763
No 66
>4ddo_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgcid, struct genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia vietnamiensis} PDB: 4f32_A*
Probab=99.51 E-value=4.8e-13 Score=141.76 Aligned_cols=314 Identities=12% Similarity=0.055 Sum_probs=184.6
Q ss_pred CceEEEEeeeecCCCCcccChHHHHHHHhhhhc--CCcchHHHHHHHHHHcCCCceee--cCCC------CcCCCCCCch
Q 011007 86 RHVYLVDYACYKPPVTCRVPFATFMEHSRLILK--NNPKSVEFQMRILERSGLGEETC--LPPA------IHYIPPTPTM 155 (496)
Q Consensus 86 ~~v~Iv~~~~y~P~~~~~v~~~~~~e~~~~~~~--~~~~~~~f~~~i~~~sGi~~r~~--~~~~------~~~~~~~~~~ 155 (496)
++|.|+|+||..|. . .+.+++.+.+.. +. +.+-. + ++..++..+.. ++.. ......-.+-
T Consensus 24 ~~v~ItG~g~~~P~--g-~~~~~~w~~l~~-g~s~i~~~~-~-----~~~~~~~~~~~g~v~~~~~~~~~~fd~~~~i~~ 93 (451)
T 4ddo_A 24 LRVVVTGIGIVSPL--G-CGKELVWQRLIG-GGSGLRRLG-D-----DIAGELSAKVGGTVQDVAEDPEGGFDPERSVPH 93 (451)
T ss_dssp CCEEEEEEEEEETT--E-ESHHHHHHHHHT-TCCCEEECC-H-----HHHTTSSCCEEECCCCTTTCTTTCCCGGGTSCH
T ss_pred CCEEEEEeEEECCC--C-CCHHHHHHHHHc-CCCeeeeCC-c-----cccccccCccceEccccccccccccchhhhCCH
Confidence 47999999999998 3 678888887653 11 01100 1 12223332221 1100 0000000011
Q ss_pred HHH--HHhHHHHHHHHHHHHHHHcCCCcCCc-C----EEEeeccC---------------------------CCCCCcHH
Q 011007 156 EAA--RGEAELVIFSAMDSLLQKTGLKPKDI-D----ILIVNCSL---------------------------FSPTPSLS 201 (496)
Q Consensus 156 ~~~--~~ea~~la~~Aa~~aL~~agi~p~dI-D----~LI~~ss~---------------------------~~~~Ps~a 201 (496)
.++ ......|+.+|+++||+++|+++++| | .+++.++. .+..+..+
T Consensus 94 ~~~~~~d~~~~L~l~Aa~~AL~dAGl~~~~i~d~~~~gv~vgt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 173 (451)
T 4ddo_A 94 KELRKMDRFIQMAMVAADEALAEAGWAPEAEQQRERTATVVASGIGGFPGLAEAVRIGETRGVRRLSPFTIPFFLSNLAA 173 (451)
T ss_dssp HHHTTSCHHHHHHHHHHHHHHHHHTCCCCSHHHHTTEEEEEECSSCSHHHHHHHHHHHHHTCGGGCCTTHHHHHCTTHHH
T ss_pred HHHhhCCHHHHHHHHHHHHHHHHcCCChhhcccccceEEEEeecCCchHHHHHHHHHHHhcCccccCcchhhccccchHH
Confidence 111 12367899999999999999999999 7 56666541 12345678
Q ss_pred HHHHHHcCCCCCceeeEecCCCcchHHHHHHHHHHHHhcCCCCEEEEEEECCCCCCC-----------------------
Q 011007 202 AMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLLQVHPNSNAVVVSTEIITPNY----------------------- 258 (496)
Q Consensus 202 ~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL~~~~~~~aLVVs~E~~s~~~----------------------- 258 (496)
.+|+..||++. ++++++ .+|++++.||..|.++|++|..+.|||+++|..+...
T Consensus 174 ~~ia~~lgl~G--p~~~v~-~aCsS~l~Al~~A~~~I~~G~~d~vLvgG~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~ 250 (451)
T 4ddo_A 174 GQISIKHRFRG--PLGCPV-TACAASVQAIGDAMRMIRTGEADVVLAGGAEAAFDKVSLGGFAAARALSTGFSEEPVRAS 250 (451)
T ss_dssp HHHHHHHTCCS--CEECCC-CGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCSCTTSGGGSC
T ss_pred HHHHHHhcCCC--ceeeec-CccHHHHHHHHHHHHHHHCCCCCEEEEeccccccCHHHHHHHHHHhhhccCCCcCccccc
Confidence 99999999973 899999 6999999999999999999999999999999865210
Q ss_pred ccC-CCccccccccccccccEEEEEeccCCcccc--cce-eEeeEEEEEecCCcccccceeecccCCCceeeeechhHHH
Q 011007 259 YQG-NERAMLLPNCLFRMGGAAILLSNRRRNRSR--AKY-RLVHVVRTHKGADDKAYRCVFEEEDKEGKVGISLSKDLMA 334 (496)
Q Consensus 259 ~~~-~dr~~l~~~~lfgDGAaA~lLs~~~~~~~~--~~~-~L~~~~~t~~~~d~~~~~~~~~~~d~~G~~g~~ls~d~~~ 334 (496)
.+. .++ ..+++||||+|+||++.+..+++ ..+ ++.+ +....|+... ..+.. ++ .
T Consensus 251 ~pfd~~~----~g~v~gdGAaavvL~~~~~A~~~g~~i~a~i~g---~~~~~d~~~~---~~~~~-~~-------~---- 308 (451)
T 4ddo_A 251 RPFDRDR----DGFVMGEGAAMVVVESLDHALARGARPIAEIIG---YGTTADAYHM---TAGPD-DG-------S---- 308 (451)
T ss_dssp CTTBTTC----CSBCBBCEEEEEEEEEHHHHHHTTCCCSEEEEE---EEEEECCSCS---SCCCT-TC-------H----
T ss_pred cccccCC----CCcEEeceEEEEEEeeHHHHHhCCCceEEEEEE---EEEecCCCcc---CCCCC-CH-------H----
Confidence 000 122 35789999999999875421111 111 2322 2222233211 11100 00 0
Q ss_pred HHHHHhhhhhhhcCCCccchhHHHHHHHHHHHHhhhcc-ccCCcccchhccccEEEeccCCHHHHHHH-----HHHcCCC
Q 011007 335 IAGEALKSNITTIGPLVLPASEQLLFLMTLIGRKIFNP-KWKPYIPDFKQAFEHFCIHAGGRAVIDEL-----QKNLQLS 408 (496)
Q Consensus 335 v~g~~l~~~i~~~gp~vlp~~e~~~~~~~~~~~~v~~~-~~~~~~p~~~~did~f~~H~~~~~v~~~i-----~~~Lgl~ 408 (496)
+ + ....++.++. .+. .+|||++.+|..+..+-+.+ .+.++..
T Consensus 309 --~-------------------~-----~~ai~~al~~Agl~------~~dId~ve~Hgtgt~~~d~~E~~al~~~~~~~ 356 (451)
T 4ddo_A 309 --G-------------------A-----MRAMKLALRMGDVA------PEQVDYVNAHATSTPVGDAGEIEALKTVFGVG 356 (451)
T ss_dssp --H-------------------H-----HHHHHHHHHHHTCC------GGGCCEEECCCCSCHHHHHHHHHHHHHHHCSS
T ss_pred --H-------------------H-----HHHHHHHHHHcCCC------HHHcCEEEecCCcCcccCHHHHHHHHHHhCCC
Confidence 0 0 0112334432 343 38999999998887665543 3444431
Q ss_pred hhhHhhhhhhhcccCCccCCchHHHHHHH---HHhCCC-------------------------CCCCEEEEEeechhHhh
Q 011007 409 AEHVEASRMTLHRFGNTSSSSLWYEMSYI---EEKGRM-------------------------KKGDRVWQIAFGSGFKC 460 (496)
Q Consensus 409 ~e~~~~S~~~l~r~GNtsSaSi~~~La~~---~~~g~i-------------------------~~Gd~Vll~~fG~G~~~ 460 (496)
.++. --.+-..+||+.+|+=...+..+ ++++.+ .+..+++.-+||-|-+-
T Consensus 357 -~~~~-v~s~k~~~GH~~gAaG~~~~i~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~sfgfgG~n 434 (451)
T 4ddo_A 357 -AGPA-ISSTKSATGHLLGAAGAIEAAFSILALRDGVLPGTLNLEHPDPAADGLDLIGPAARHVPVEIALSNGFGFGGVN 434 (451)
T ss_dssp -SSCE-EECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCSSBCGGGTTSEECCSSCEECCCSEEEEEEEETTTEE
T ss_pred -CCCc-ccCchhhhccCHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCcccccccccCCCCCCCCcCEEEEeeEcCCCce
Confidence 1111 01223356998888766555543 333311 13456778889999888
Q ss_pred hheeeEee
Q 011007 461 NSAVWKCN 468 (496)
Q Consensus 461 ~sav~r~~ 468 (496)
.++|++.-
T Consensus 435 a~~vl~~~ 442 (451)
T 4ddo_A 435 ASVLFRRY 442 (451)
T ss_dssp EEEEEEES
T ss_pred EEEEEeeC
Confidence 88888754
No 67
>2wu9_A 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine oxidation, fatty acid metabolism, oxylipin biosynthesis, plant lipid metabolism; 1.50A {Arabidopsis thaliana} PDB: 2c7y_A 2c7z_A 2wua_A
Probab=99.50 E-value=3.4e-13 Score=142.50 Aligned_cols=94 Identities=16% Similarity=0.225 Sum_probs=84.1
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEeeccCC-C-CCCcHHHHHHHHcCCCCCceeeEecCCCcchHHHHHHHHHHHHh
Q 011007 162 AELVIFSAMDSLLQKTGLKPKDIDILIVNCSLF-S-PTPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLLQ 239 (496)
Q Consensus 162 a~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~-~-~~Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL~ 239 (496)
+.+|+.+|++++|+++|++|++||.+++.++.. + ..|..+.+|+.++|++...++++++ .+|++++.||..|.++|+
T Consensus 55 ~~~La~~Aa~~AL~dAGl~~~~Id~vi~g~~~~~~~~~~~~a~~va~~lGl~~~~p~~~v~-~aCaSg~~Al~~A~~~I~ 133 (442)
T 2wu9_A 55 PDDLLAPVLRALIEKTNLNPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVAVRTVN-RQCSSGLQAVADVAAAIK 133 (442)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCCCEEEECCSSBHHHHHHHHHHHHHHTTCCTTSCEEEEE-CGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeecCccCCCChHHHHHHHHcCCCCCceEEEeC-CcCHHHHHHHHHHHHHHH
Confidence 678999999999999999999999999887543 3 2467889999999996578999999 699999999999999999
Q ss_pred cCCCCEEEEEEECCCCC
Q 011007 240 VHPNSNAVVVSTEIITP 256 (496)
Q Consensus 240 ~~~~~~aLVVs~E~~s~ 256 (496)
+|..+.|||+++|.++.
T Consensus 134 sG~~d~vLvgG~e~~s~ 150 (442)
T 2wu9_A 134 AGFYDIGIGAGLESMTT 150 (442)
T ss_dssp TTSCSEEEEEEEEETTT
T ss_pred CCCCCEEEEEEEeecCC
Confidence 99999999999998764
No 68
>2ib8_A Acetyl-COA acetyltransferase; thiolase fold, potassium ION, chloride, beta-alpha-beta-ALPH alpha-beta-BETA topology; HET: MES; 1.85A {Homo sapiens} PDB: 2ib7_A* 2ib9_A* 2ibu_A* 2ibw_A* 2iby_A* 2f2s_A*
Probab=99.49 E-value=9.1e-13 Score=137.19 Aligned_cols=94 Identities=13% Similarity=0.115 Sum_probs=85.0
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEeecc-CCCCCCcHHHHHHHHcCCCCCceeeEecCCCcchHHHHHHHHHHHHhc
Q 011007 162 AELVIFSAMDSLLQKTGLKPKDIDILIVNCS-LFSPTPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLLQV 240 (496)
Q Consensus 162 a~~la~~Aa~~aL~~agi~p~dID~LI~~ss-~~~~~Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL~~ 240 (496)
..+|+.+|++++|+++|+++++||.+++.+. .+...|..+.+|+.++|++...++++++ .+|++++.||..|.++|++
T Consensus 32 ~~~l~~~a~~~Al~dAgl~~~~id~~~~g~~~~~~~~~~~a~~va~~lgl~~~~p~~~v~-~aCaS~~~Al~~A~~~I~~ 110 (395)
T 2ib8_A 32 ATKLGSIAIQGAIEKAGIPKEEVKEAYMGNVLQGGEGQAPTRQAVLGAGLPISTPCTTIN-KVCASGMKAIMMASQSLMC 110 (395)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCTTSCSCHHHHHHHHTTCCTTCCEEEEE-CGGGHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCchHHHHHHHHcCCCCCceEEEec-ccccHHHHHHHHHHHHHHC
Confidence 5689999999999999999999999998865 4566788999999999996568999999 6999999999999999999
Q ss_pred CCCCEEEEEEECCCCC
Q 011007 241 HPNSNAVVVSTEIITP 256 (496)
Q Consensus 241 ~~~~~aLVVs~E~~s~ 256 (496)
|..+.+||+++|.++.
T Consensus 111 G~~d~vlvgG~e~~s~ 126 (395)
T 2ib8_A 111 GHQDVMVAGGMESMSN 126 (395)
T ss_dssp TSCSEEEEEEEEEGGG
T ss_pred CCCCEEEEEeeecccC
Confidence 9999999999998654
No 69
>1wdk_C 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: c.95.1.1 c.95.1.1 PDB: 1wdl_C* 1wdm_C* 2d3t_C*
Probab=99.49 E-value=4.2e-13 Score=139.60 Aligned_cols=94 Identities=14% Similarity=0.157 Sum_probs=84.3
Q ss_pred HHHHHHHHHHHHHHHc-CCCcCCcCEEEeeccC-CCC-CCcHHHHHHHHcCCCCCceeeEecCCCcchHHHHHHHHHHHH
Q 011007 162 AELVIFSAMDSLLQKT-GLKPKDIDILIVNCSL-FSP-TPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLL 238 (496)
Q Consensus 162 a~~la~~Aa~~aL~~a-gi~p~dID~LI~~ss~-~~~-~Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL 238 (496)
+.+|+.+|++++|+++ |+++++||.+++.++. ++. .+..+.+|+.++|+++..++++++ .+|++++.||..|.++|
T Consensus 30 ~~~L~~~a~~~AL~dA~gl~~~~id~v~~g~~~~~~~~~~~~a~~ia~~lgl~~~~p~~~v~-~aCaS~~~Al~~A~~~I 108 (390)
T 1wdk_C 30 AEDMSAHLISKVLERNSKVDPGEVEDVIWGCVNQTLEQGWNIARMASLMTQIPHTSAAQTVS-RLCGSSMSALHTAAQAI 108 (390)
T ss_dssp HHHHHHHHHHHHHHHCTTSCGGGEEEEEEECSSBSBTTTTTHHHHHHTTSSSCTTSEEEEEE-CGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccCCCHHHCCEEEEEeeccccCCCCcHHHHHHHHcCCCCCccEEEEc-ccchhHHHHHHHHHHHH
Confidence 5789999999999999 9999999999988653 333 378899999999997678999999 69999999999999999
Q ss_pred hcCCCCEEEEEEECCCCC
Q 011007 239 QVHPNSNAVVVSTEIITP 256 (496)
Q Consensus 239 ~~~~~~~aLVVs~E~~s~ 256 (496)
++|..+.+||+++|.++.
T Consensus 109 ~~G~~d~vlvgG~e~~s~ 126 (390)
T 1wdk_C 109 MTGNGDVFVVGGVEHMGH 126 (390)
T ss_dssp HTTSCSEEEEEEEEETTT
T ss_pred HcCCCCEEEEeeeecccc
Confidence 999999999999998763
No 70
>2wge_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta ketoacyl synthase I thiolactomycin, cytoplasm, transferase, acyltransferase; HET: TLM; 1.80A {Mycobacterium tuberculosis} PDB: 2wgd_A* 2wgg_A* 2wgf_A*
Probab=99.49 E-value=2.2e-12 Score=135.31 Aligned_cols=314 Identities=11% Similarity=0.054 Sum_probs=181.0
Q ss_pred CCceEEEEeeeecCCCCcccChHHHHHHHhhhhc--CCcchHHHHHHHHHHcCCCcee--ecCCCCcCCCCCCchHHH--
Q 011007 85 PRHVYLVDYACYKPPVTCRVPFATFMEHSRLILK--NNPKSVEFQMRILERSGLGEET--CLPPAIHYIPPTPTMEAA-- 158 (496)
Q Consensus 85 ~~~v~Iv~~~~y~P~~~~~v~~~~~~e~~~~~~~--~~~~~~~f~~~i~~~sGi~~r~--~~~~~~~~~~~~~~~~~~-- 158 (496)
.++|.|+|+||..|.. .+.+++.+.+.. ++ +.+-. +| -.+..++..+. +++++.. ...+-.++
T Consensus 11 ~~~vaI~G~g~~~p~g---~~~~~~w~~l~~-g~~~i~~~~-~~---~~~~~~~~~~~~~~~~~d~~---~~~~~~~~~~ 79 (416)
T 2wge_A 11 FPSVVVTAVTATTSIS---PDIESTWKGLLA-GESGIHALE-DE---FVTKWDLAVKIGGHLKDPVD---SHMGRLDMRR 79 (416)
T ss_dssp SCCEEEEEEEEEESSC---SSHHHHHHHHHT-TCCCCEECC-CH---HHHHHTCSCCEEBCCSSCGG---GGCCHHHHHH
T ss_pred CCcEEEEeeEEECCCC---CCHHHHHHHHHc-CCCEEEeCC-cc---ccccccCCccEEEEeCCchh---hhCCHHHHHh
Confidence 3469999999999983 678888887643 11 11100 11 10122333322 1221100 00111121
Q ss_pred HHhHHHHHHHHHHHHHHHcCCC---cCCcCEEEeecc-CCC-----------------CCC---------cHHHHHHHHc
Q 011007 159 RGEAELVIFSAMDSLLQKTGLK---PKDIDILIVNCS-LFS-----------------PTP---------SLSAMVINKY 208 (496)
Q Consensus 159 ~~ea~~la~~Aa~~aL~~agi~---p~dID~LI~~ss-~~~-----------------~~P---------s~a~~I~~~L 208 (496)
.....+|+.+|++++|+++|++ +++|+ |+++++ .++ ..| ..+.+|+..|
T Consensus 80 ~d~~~~l~l~aa~~AL~dAG~~~~~~~~~g-v~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~l 158 (416)
T 2wge_A 80 MSYVQRMGKLLGGQLWESAGSPEVDPDRFA-VVVGTGLGGAERIVESYDLMNAGGPRKVSPLAVQMIMPNGAAAVIGLQL 158 (416)
T ss_dssp SCHHHHHHHHHHHHHHHHTTCCCCCGGGEE-EEEECCSCCCTHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHHHcCCCccCCCceE-EEEeecCCcHHHHHHHHHHHHhcCcccCCchhhccccchhHHHHHHHHh
Confidence 1226789999999999999982 33444 555543 332 222 5789999999
Q ss_pred CCCCCceeeEecCCCcchHHHHHHHHHHHHhcCCCCEEEEEEECCCCCC----------Ccc-----CC------Ccccc
Q 011007 209 KLRSNIKSFNLSGMGCSAGLISIDLARDLLQVHPNSNAVVVSTEIITPN----------YYQ-----GN------ERAML 267 (496)
Q Consensus 209 gl~~~~~~~dl~g~gCsg~l~al~lA~~lL~~~~~~~aLVVs~E~~s~~----------~~~-----~~------dr~~l 267 (496)
|++ .++++++ .+|++++.||.+|.++|++|..+.|||+++|..+.. ... ++ |+.
T Consensus 159 gl~--gp~~~v~-~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~pfd~~-- 233 (416)
T 2wge_A 159 GAR--AGVMTPV-SACSSGSEAIAHAWRQIVMGDADVAVCGGVEGPIEALPIAAFSMMRAMSTRNDEPERASRPFDKD-- 233 (416)
T ss_dssp TCC--SCEECCC-CGGGHHHHHHHHHHHHHHTTSCSEEEEEECCCCCCHHHHHHHHTTTCBCCCTTSGGGSCCTTBTT--
T ss_pred ccC--CCccccc-CchHHHHHHHHHHHHHHHcCCCCEEEEeeecCccchHHHHHHHhcchhhccccCCcccccccccC--
Confidence 996 4899999 699999999999999999999999999999987642 010 00 111
Q ss_pred ccccccccccEEEEEeccCCcccccceeE-eeEEEEEecCCcccccceeecccCCCceeeeechhHHHHHHHHhhhhhhh
Q 011007 268 LPNCLFRMGGAAILLSNRRRNRSRAKYRL-VHVVRTHKGADDKAYRCVFEEEDKEGKVGISLSKDLMAIAGEALKSNITT 346 (496)
Q Consensus 268 ~~~~lfgDGAaA~lLs~~~~~~~~~~~~L-~~~~~t~~~~d~~~~~~~~~~~d~~G~~g~~ls~d~~~v~g~~l~~~i~~ 346 (496)
-..++|||||+|+||++.+...++ +..+ ..+..+....|+.. +..+. ..+ ..
T Consensus 234 ~dg~v~geGaaavvL~~~~~A~~~-g~~~~a~i~g~~~~~dg~~---~~~p~-~~~---------------~~------- 286 (416)
T 2wge_A 234 RDGFVFGEAGALMLIETEEHAKAR-GAKPLARLLGAGITSDAFH---MVAPA-ADG---------------VR------- 286 (416)
T ss_dssp CCCBCBBCEEEEEEEEEHHHHHHT-TCCCSEEEEEEEEEECCSC---SSSCC-TTC---------------HH-------
T ss_pred CCCccccCceEEEEECcHHHHHHC-CCceEEEEEEEEEecCCCC---ccCCC-CCh---------------HH-------
Confidence 136799999999999875421111 1011 11222222333321 11110 000 00
Q ss_pred cCCCccchhHHHHHHHHHHHHhhhcc-ccCCcccchhccccEEEeccCCHHHHHHHH----HHcCCChhhHhhhhhhhcc
Q 011007 347 IGPLVLPASEQLLFLMTLIGRKIFNP-KWKPYIPDFKQAFEHFCIHAGGRAVIDELQ----KNLQLSAEHVEASRMTLHR 421 (496)
Q Consensus 347 ~gp~vlp~~e~~~~~~~~~~~~v~~~-~~~~~~p~~~~did~f~~H~~~~~v~~~i~----~~Lgl~~e~~~~S~~~l~r 421 (496)
.....++.++. .+. .+|||+|.+|..+..+-|.++ +.++.. ++.. ..+-..
T Consensus 287 ---------------~~~ai~~al~~agl~------~~dId~ve~HgtgT~~gD~~E~~al~~~~~~--~~~v-~s~k~~ 342 (416)
T 2wge_A 287 ---------------AGRAMTRSLELAGLS------PADIDHVNAHGTATPIGDAAEANAIRVAGCD--QAAV-YAPKSA 342 (416)
T ss_dssp ---------------HHHHHHHHHHHHTCC------GGGCCEEECCCCCCHHHHHHHHHHHHHTTCT--TSEE-ECTHHH
T ss_pred ---------------HHHHHHHHHHHcCCC------HHHCCEEEECCCCCcCCCHHHHHHHHHhccC--CCCc-cCCccc
Confidence 00011333332 333 389999999988877655553 234321 2211 223456
Q ss_pred cCCccCCchHHHHHHH---HHhCCC------------------------CCCCEEEEEeechhHhhhheeeE
Q 011007 422 FGNTSSSSLWYEMSYI---EEKGRM------------------------KKGDRVWQIAFGSGFKCNSAVWK 466 (496)
Q Consensus 422 ~GNtsSaSi~~~La~~---~~~g~i------------------------~~Gd~Vll~~fG~G~~~~sav~r 466 (496)
+||+.+|+=...+... ++++.+ .+-.+++.-+||-|-+-.++|++
T Consensus 343 ~GH~~gAsG~~~~i~~~l~l~~~~ipp~~~~~~~~p~~~~~~v~~~~~~~~~~~a~~~sfGfGG~na~~vl~ 414 (416)
T 2wge_A 343 LGHSIGAVGALESVLTVLTLRDGVIPPTLNYETPDPEIDLDVVAGEPRYGDYRYAVNNSFGFGGHNVALAFG 414 (416)
T ss_dssp HCBCGGGHHHHHHHHHHHHHHHTEECCCTTCCSBCTTTCCEECCSSCEECCCCEEEEEEEETTTEEEEEEEE
T ss_pred ccCcHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCcccCCCCCccCCCCEEEEeCcccCceeEEEEEE
Confidence 8999998877766553 333321 12356778889988776677765
No 71
>2ix4_A 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ketoacyl-(acyl carrier protein) synthase, lipid metabol condensing enzyme; 1.95A {Arabidopsis thaliana} SCOP: c.95.1.1 c.95.1.1 PDB: 1w0i_A
Probab=99.45 E-value=1.8e-12 Score=136.47 Aligned_cols=253 Identities=14% Similarity=0.110 Sum_probs=154.5
Q ss_pred HHHHHHHHHHHHHHHcCC-CcCCcC----EEEeecc-CC-----------------CCC---------CcHHHHHHHHcC
Q 011007 162 AELVIFSAMDSLLQKTGL-KPKDID----ILIVNCS-LF-----------------SPT---------PSLSAMVINKYK 209 (496)
Q Consensus 162 a~~la~~Aa~~aL~~agi-~p~dID----~LI~~ss-~~-----------------~~~---------Ps~a~~I~~~Lg 209 (496)
..+|+.+|++++|+++|+ ++++|| .+++.++ .+ ... ...+.+|+.+||
T Consensus 88 ~~~l~l~aa~~AL~dAG~~~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lg 167 (431)
T 2ix4_A 88 FIGYAVCAADEALRDAEWLPTEEEEKERTGVSIGGGIGSICDIVEAAQLICEKRLRRLSPFFIPKILVNMASGHVSMKYG 167 (431)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCSHHHHHTEEEEEEESSCCHHHHHHHHHHHHTTCGGGCCTTHHHHHCTTHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCCccccCCCCEEEEEeeccccHHHHHHHHHHHHhcCcccCChhhhhcchhHHHHHHHHHHHC
Confidence 578999999999999999 888887 4555543 21 112 257899999999
Q ss_pred CCCCceeeEecCCCcchHHHHHHHHHHHHhcCCCCEEEEEEECCCCCCC----------cc--------CCCcc--cccc
Q 011007 210 LRSNIKSFNLSGMGCSAGLISIDLARDLLQVHPNSNAVVVSTEIITPNY----------YQ--------GNERA--MLLP 269 (496)
Q Consensus 210 l~~~~~~~dl~g~gCsg~l~al~lA~~lL~~~~~~~aLVVs~E~~s~~~----------~~--------~~dr~--~l~~ 269 (496)
++. ++++++ .+|++++.||.+|.++|++|..+.|||+++|.++... .. ...|. ..-.
T Consensus 168 l~g--p~~~v~-taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~pfd~~~~ 244 (431)
T 2ix4_A 168 FQG--PNHAAV-TACATGAHSIGDATRMIQFGDADVMVAGGTESSIDALSVAGFSRSRALSTKFNSSPQEASRPFDCDRD 244 (431)
T ss_dssp CCS--CEECBC-CGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCTTTTCGGGSCCTTBTTCC
T ss_pred CCC--ceeCcc-ChhHHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHhccccCccccCCcccccccCCCCCC
Confidence 973 899999 6999999999999999999999999999999755310 00 00000 0013
Q ss_pred ccccccccEEEEEeccCCcccccceeEe-eEEEEEecCCcccccceeecccCCCceeeeechhHHHHHHHHhhhhhhhcC
Q 011007 270 NCLFRMGGAAILLSNRRRNRSRAKYRLV-HVVRTHKGADDKAYRCVFEEEDKEGKVGISLSKDLMAIAGEALKSNITTIG 348 (496)
Q Consensus 270 ~~lfgDGAaA~lLs~~~~~~~~~~~~L~-~~~~t~~~~d~~~~~~~~~~~d~~G~~g~~ls~d~~~v~g~~l~~~i~~~g 348 (496)
.+++||||+|+||++.+...++ +..+. .+..+....|+.. +..+.. ++ ..
T Consensus 245 g~~~gdGAaavvL~~~~~A~~~-g~~i~a~i~g~~~~~dg~~---~~~p~~-~~---------------~~--------- 295 (431)
T 2ix4_A 245 GFVIGEGSGVIVLEEYEHAKRR-GAKIYAELCGYGMSGDAHH---ITQPPE-DG---------------KG--------- 295 (431)
T ss_dssp SBCBBCEEEEEEEEEHHHHHHT-TCCCCEEEEEEEEEECCSC---SSCCCT-TC---------------HH---------
T ss_pred CceeecceEEEEEccHHHHHhC-CCceEEEEeeeeecCCCCC---CCCCCC-CH---------------HH---------
Confidence 5789999999999875421111 11111 1222333344331 111100 00 00
Q ss_pred CCccchhHHHHHHHHHHHHhhhcc-ccCCcccchhccccEEEeccCCHHHHHH-----HHHHcCCCh--hhHhhhhhhhc
Q 011007 349 PLVLPASEQLLFLMTLIGRKIFNP-KWKPYIPDFKQAFEHFCIHAGGRAVIDE-----LQKNLQLSA--EHVEASRMTLH 420 (496)
Q Consensus 349 p~vlp~~e~~~~~~~~~~~~v~~~-~~~~~~p~~~~did~f~~H~~~~~v~~~-----i~~~Lgl~~--e~~~~S~~~l~ 420 (496)
.....++.++. .+. .+|||++.+|..+..+-|. +.+.++... +++.- -..-.
T Consensus 296 -------------~~~ai~~al~~agl~------~~dId~ve~HgtgT~~~D~~E~~al~~~~~~~~~~~~~~v-~s~k~ 355 (431)
T 2ix4_A 296 -------------AVLAMTRALRQSGLC------PNQIDYVNAHATSTPIGDAVEARAIKTVFSEHATSGTLAF-SSTKG 355 (431)
T ss_dssp -------------HHHHHHHHHHHHTCC------GGGCCEEECCCCSCHHHHHHHHHHHHHHHTHHHHTSCSEE-ECTHH
T ss_pred -------------HHHHHHHHHHHcCCC------HHHcCEEEEeCCcCcccCHHHHHHHHHHHcccccCCCcee-ecchh
Confidence 00011333332 333 3899999999888765443 334444221 12210 12245
Q ss_pred ccCCccCCchHHHHHHHH---HhCCCC-------------------------CCCEEEEEeechhHhhhheeeE
Q 011007 421 RFGNTSSSSLWYEMSYIE---EKGRMK-------------------------KGDRVWQIAFGSGFKCNSAVWK 466 (496)
Q Consensus 421 r~GNtsSaSi~~~La~~~---~~g~i~-------------------------~Gd~Vll~~fG~G~~~~sav~r 466 (496)
.+||+.+|+-...+.... +.+.+. +..+++.-+||.|-+-.++|++
T Consensus 356 ~~GH~~gAsG~~~li~~~l~l~~~~ipp~~~~~~~~p~~~~~~v~~~~~~~~~~~~a~~~sfGfGG~na~~il~ 429 (431)
T 2ix4_A 356 ATGHLLGAAGAVEAIFSILAIHHGVAPMTLNVKNPDPIFDKRFMPLTTSKKMLVRTAMSNSFGFGGTNASLLFA 429 (431)
T ss_dssp HHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCSSBCTTCCSSSCCCSSCEECCCSEEEEEEEETTTEEEEEEEE
T ss_pred hhcccHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCcccCCccccccCCCCEEEEecccCCCeeEEEEEe
Confidence 799999998777666543 333210 2356777899988777777765
No 72
>2qo3_A Eryaii erythromycin polyketide synthase modules 3; ketosynthase, acyltransferase, phosphopantetheine, transfera; 2.59A {Saccharopolyspora erythraea}
Probab=99.39 E-value=1.3e-11 Score=141.03 Aligned_cols=251 Identities=16% Similarity=0.174 Sum_probs=161.2
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCE----EEeecc-CCCCC-----------------C-cHHHHHHHHcCCCCCceeeE
Q 011007 162 AELVIFSAMDSLLQKTGLKPKDIDI----LIVNCS-LFSPT-----------------P-SLSAMVINKYKLRSNIKSFN 218 (496)
Q Consensus 162 a~~la~~Aa~~aL~~agi~p~dID~----LI~~ss-~~~~~-----------------P-s~a~~I~~~Lgl~~~~~~~d 218 (496)
...|+.+|+.++|+++|+++++||. ++++++ .++.. + ..+.+|+..||++. ++++
T Consensus 95 ~~rL~leaa~eALedAGi~~~~i~~~~~gV~vG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~lgl~G--ps~t 172 (915)
T 2qo3_A 95 QQRLLLETSWELVENAGIDPHSLRGTATGVFLGVAKFGYGEDTAAAEDVEGYSVTGVAPAVASGRISYTMGLEG--PSIS 172 (915)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGGTTBCCEEEEECCCCCTTTTCC---CTTCHHHHTTCHHHHHHHHHHHHTBCS--CEEE
T ss_pred HHHHHHHHHHHHHHHcCCChHHcCCcceEEEEEecCchHHhhhcccccccccccccccccHHHHHHHHHhCCCC--CEEE
Confidence 6789999999999999999999994 666654 44421 1 46889999999973 8999
Q ss_pred ecCCCcchHHHHHHHHHHHHhcCCCCEEEEEEECCCCCC----------Cc-------cCCCccccccccccccccEEEE
Q 011007 219 LSGMGCSAGLISIDLARDLLQVHPNSNAVVVSTEIITPN----------YY-------QGNERAMLLPNCLFRMGGAAIL 281 (496)
Q Consensus 219 l~g~gCsg~l~al~lA~~lL~~~~~~~aLVVs~E~~s~~----------~~-------~~~dr~~l~~~~lfgDGAaA~l 281 (496)
++ .+|++++.||++|.+.|++|..+.|||+++|.++.. .. +..++. ..+++||||+|+|
T Consensus 173 v~-taCsSsl~Al~~A~~~I~~G~~d~aLvgGve~~~~p~~~~~~~~~~~ls~~g~~~~Fd~~a---dG~v~gEGagavV 248 (915)
T 2qo3_A 173 VD-TACSSSLVALHLAVESLRKGESSMAVVGGAAVMATPGVFVDFSRQRALAADGRSKAFGAGA---DGFGFSEGVTLVL 248 (915)
T ss_dssp EE-CGGGHHHHHHHHHHHHHHTTSCSSEEEEEEECCSSTHHHHHHHTTTCBCSSCCCCTTBTTC---CCBCBBCEEEEEE
T ss_pred EC-CCCHHHHHHHHHHHHHHHcCCCCEEEEeEehhhcCHHHHHHHhhhcccCCCCCcccccCCC---CceeecCceEEEE
Confidence 99 699999999999999999999999999999987531 00 001111 3679999999999
Q ss_pred EeccCCcccc--cceeEeeEEEEEecCCcccccceeecccCCCceeeeechhHHHHHHHHhhhhhhhcCCCccchhHHHH
Q 011007 282 LSNRRRNRSR--AKYRLVHVVRTHKGADDKAYRCVFEEEDKEGKVGISLSKDLMAIAGEALKSNITTIGPLVLPASEQLL 359 (496)
Q Consensus 282 Ls~~~~~~~~--~~~~L~~~~~t~~~~d~~~~~~~~~~~d~~G~~g~~ls~d~~~v~g~~l~~~i~~~gp~vlp~~e~~~ 359 (496)
|++.+.-.++ ..|- .+..+....|+... +. ..|...+ +
T Consensus 249 L~~~~~A~~~g~~i~a--~I~G~~~~~dg~~~-------------~~----~~p~~~~-------------------~-- 288 (915)
T 2qo3_A 249 LERLSEARRNGHEVLA--VVRGSALNQDGASN-------------GL----SAPSGPA-------------------Q-- 288 (915)
T ss_dssp EEEHHHHHHTTCCCCE--EEEEEEEEECCSCS-------------ST----TCCCHHH-------------------H--
T ss_pred EeEhHHhhhCCCCeEE--EEEEEEEecCCCcc-------------CC----CCCCHHH-------------------H--
Confidence 9875421111 1111 11222222333211 00 0010000 0
Q ss_pred HHHHHHHHhhhcc-ccCCcccchhccccEEEeccCCHHHH-----HHHHHHcCCChh---hHhhhhhhhcccCCccCCch
Q 011007 360 FLMTLIGRKIFNP-KWKPYIPDFKQAFEHFCIHAGGRAVI-----DELQKNLQLSAE---HVEASRMTLHRFGNTSSSSL 430 (496)
Q Consensus 360 ~~~~~~~~~v~~~-~~~~~~p~~~~did~f~~H~~~~~v~-----~~i~~~Lgl~~e---~~~~S~~~l~r~GNtsSaSi 430 (496)
....++.++. .+. .+|||++..|..+..+- ..+.+.++.... .+. --..-..+||+.+|+-
T Consensus 289 ---~~~i~~Al~~Agl~------p~dId~ve~HgtgT~~gD~~E~~al~~~f~~~~~~~~~~~-vgs~K~~iGH~~~AaG 358 (915)
T 2qo3_A 289 ---RRVIRQALESCGLE------PGDVDAVEAHGTGTALGDPIEANALLDTYGRDRDADRPLW-LGSVKSNIGHTQAAAG 358 (915)
T ss_dssp ---HHHHHHHHHHTTCC------GGGCCEEECCCCCCTTTHHHHHHHHHHHTSSSCCTTSCEE-EECTHHHHCBCGGGHH
T ss_pred ---HHHHHHHHHHcCCC------HHHCcEEEecCCCCccCCHHHHHHHHHHhccccCCCCccc-ccCcccceeCCccccc
Confidence 0112344432 343 38999999998765443 345667775422 111 0124567999999988
Q ss_pred HHHHHHH---HHhCCCC--------------------------------CCCEEEEEeechhHhhhheeeEee
Q 011007 431 WYEMSYI---EEKGRMK--------------------------------KGDRVWQIAFGSGFKCNSAVWKCN 468 (496)
Q Consensus 431 ~~~La~~---~~~g~i~--------------------------------~Gd~Vll~~fG~G~~~~sav~r~~ 468 (496)
...|... ++.|.+. .-.+...-+||.|-+-..+|++--
T Consensus 359 ~~~lik~~l~L~~~~ipp~~~~~~~~p~~~~~~~~~~~~~~~~~w~~~~~~r~a~v~sfG~gG~Nah~vl~~~ 431 (915)
T 2qo3_A 359 VTGLLKVVLALRNGELPATLHVEEPTPHVDWSSGGVALLAGNQPWRRGERTRRAAVSAFGISGTNAHVIVEEA 431 (915)
T ss_dssp HHHHHHHHHHHHHTEECCCSSCSSBCTTSCCSSSSEEECSSCEECCSSSSCCEEEEEEECTTSEEEEEEEEEC
T ss_pred hHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCceeeecCCcccccCCCCcEEEEeeecCCCceEEEEEeec
Confidence 7776654 3333321 124778899999988888888754
No 73
>2hg4_A DEBS, 6-deoxyerythronolide B synthase; ketosynthase, acyltransferase, module 5, transferase; 2.73A {Saccharopolyspora erythraea}
Probab=99.34 E-value=9.6e-11 Score=134.00 Aligned_cols=254 Identities=13% Similarity=0.113 Sum_probs=158.3
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCE----EEeecc-CCCCC-------------------CcHHHHHHHHcCCCCCceee
Q 011007 162 AELVIFSAMDSLLQKTGLKPKDIDI----LIVNCS-LFSPT-------------------PSLSAMVINKYKLRSNIKSF 217 (496)
Q Consensus 162 a~~la~~Aa~~aL~~agi~p~dID~----LI~~ss-~~~~~-------------------Ps~a~~I~~~Lgl~~~~~~~ 217 (496)
...|+.+|+.++|+++|+++++||. ++++++ .+|.. ..++.+|+..||++. +++
T Consensus 116 ~~rl~leaa~eALedAGi~~~~i~~~~~gV~vG~~~~d~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~lgl~G--ps~ 193 (917)
T 2hg4_A 116 QQRIMLEISWEALERAGHDPVSLRGSATGVFTGVGTVDYGPRPDEAPDEVLGYVGTGTASSVASGRVAYCLGLEG--PAM 193 (917)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGGTTSCEEEEEEECCCCCSCCTTSSCGGGGGGHHHHHCHHHHHHHHHHHHTCCS--CEE
T ss_pred HHHHHHHHHHHHHHHcCCChHHcCCcceEEEEEeCCchhhhhhhcCccccCcccccccccchHHHHHHHhcCCCC--CeE
Confidence 6789999999999999999999984 566654 34321 146789999999973 899
Q ss_pred EecCCCcchHHHHHHHHHHHHhcCCCCEEEEEEECCCCCCCc----------cCCCcc----ccccccccccccEEEEEe
Q 011007 218 NLSGMGCSAGLISIDLARDLLQVHPNSNAVVVSTEIITPNYY----------QGNERA----MLLPNCLFRMGGAAILLS 283 (496)
Q Consensus 218 dl~g~gCsg~l~al~lA~~lL~~~~~~~aLVVs~E~~s~~~~----------~~~dr~----~l~~~~lfgDGAaA~lLs 283 (496)
.++ .+|++++.||++|.+.|++|..+.|||+++|.++.... ..+.+. ..-..+++||||+|+||.
T Consensus 194 tv~-taCsSsl~Al~~A~~~I~~G~~d~aLvgGv~~~~~p~~~~~~~~~~~ls~~g~~~pFd~~adG~~~gEGagavVL~ 272 (917)
T 2hg4_A 194 TVD-TACSSGLTALHLAMESLRRDECGLALAGGVTVMSSPGAFTEFRSQGGLAADGRCKPFSKAADGFGLAEGAGVLVLQ 272 (917)
T ss_dssp EEE-CGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSTHHHHHHTTSSCBCTTSCCCTTBTTCCCBCBBCEEEEEEEE
T ss_pred eec-CCcHHHHHHHHHHHHHHHcCCCCEEEEeEeccccChhhhHhhhhccCcCCccccCcccccccCCCCcceEEEEEEe
Confidence 999 69999999999999999999999999999998764210 000000 011367899999999998
Q ss_pred ccCCcccc--cceeEeeEEEEEecCCcccccceeecccCCCceeeeechhHHHHHHHHhhhhhhhcCCCccchhHHHHHH
Q 011007 284 NRRRNRSR--AKYRLVHVVRTHKGADDKAYRCVFEEEDKEGKVGISLSKDLMAIAGEALKSNITTIGPLVLPASEQLLFL 361 (496)
Q Consensus 284 ~~~~~~~~--~~~~L~~~~~t~~~~d~~~~~~~~~~~d~~G~~g~~ls~d~~~v~g~~l~~~i~~~gp~vlp~~e~~~~~ 361 (496)
+.+.-.++ ..|- .+..+....|+... .... |...+ +
T Consensus 273 ~l~~A~~~g~~i~a--~I~G~~~~~dg~~~-~~~~----------------P~~~~-------------------q---- 310 (917)
T 2hg4_A 273 RLSAARREGRPVLA--VLRGSAVNQDGASN-GLTA----------------PSGPA-------------------Q---- 310 (917)
T ss_dssp EHHHHHHTTCCCCE--EEEEEEEEECCSCS-SSSC----------------CCHHH-------------------H----
T ss_pred eHHHHHhCCCCeEE--EEEEEEEecCCCcc-CCCC----------------CCHHH-------------------H----
Confidence 75421111 1111 11222222233211 0000 00000 0
Q ss_pred HHHHHHhhhcc-ccCCcccchhccccEEEeccCCHHHHHH-----HHHHcCCChh---hHhhhhhhhcccCCccCCchHH
Q 011007 362 MTLIGRKIFNP-KWKPYIPDFKQAFEHFCIHAGGRAVIDE-----LQKNLQLSAE---HVEASRMTLHRFGNTSSSSLWY 432 (496)
Q Consensus 362 ~~~~~~~v~~~-~~~~~~p~~~~did~f~~H~~~~~v~~~-----i~~~Lgl~~e---~~~~S~~~l~r~GNtsSaSi~~ 432 (496)
....++.++. .+. .+|||++..|..+..+-|. +.+.+|.... .+.. -..-..+||+.+|+-..
T Consensus 311 -~~ai~~Al~~Agl~------p~dId~veaHgtgT~~gD~~E~~al~~~fg~~~~~~~~~~v-gs~K~~iGH~~~AaG~~ 382 (917)
T 2hg4_A 311 -QRVIRRALENAGVR------AGDVDYVEAHGTGTRLGDPIEVHALLSTYGAERDPDDPLWI-GSVKSNIGHTQAAAGVA 382 (917)
T ss_dssp -HHHHHHHHHHHTCC------GGGCCEEECCCCCCTTHHHHHHHHHHTTTTTSSCTTSCCEE-ECTHHHHCBCGGGTTHH
T ss_pred -HHHHHHHHHHcCCC------HHHCCEEeeccCCCccCcHHHHHHHHHHhccccCCCCceec-cCcccceecchhhhHHH
Confidence 0112333332 343 3899999999988765443 4445554321 1100 12445699999988777
Q ss_pred HHHHH---HHhCCC-----------------------------C---CCCEEEEEeechhHhhhheeeEee
Q 011007 433 EMSYI---EEKGRM-----------------------------K---KGDRVWQIAFGSGFKCNSAVWKCN 468 (496)
Q Consensus 433 ~La~~---~~~g~i-----------------------------~---~Gd~Vll~~fG~G~~~~sav~r~~ 468 (496)
.|..+ ++.|.+ . .-.+...-+||.|-+-..+|++--
T Consensus 383 ~lik~vl~L~~~~ipp~~~~~~~~p~i~~~~~~~~v~~~~~~w~~~~~~r~a~v~sfG~gG~Nah~vl~~~ 453 (917)
T 2hg4_A 383 GVMKAVLALRHGEMPRTLHFDEPSPQIEWDLGAVSVVSQARSWPAGERPRRAGVSSFGISGTNAHVIVEEA 453 (917)
T ss_dssp HHHHHHHHHHHTEECCCTTCCSBCTTSCC---CCEECCSCEECCCCSSCCEEEEEEECTTSEEEEEEEEEC
T ss_pred HHHHHHHHHhcCCcCCCCCCCCCCccCCccccceeecCCcccCCCCCCCCEEEEeeecCCCceEEEEeccC
Confidence 66654 333321 0 124678889999988888888754
No 74
>3hhd_A Fatty acid synthase; transferase, multienzyme, megasynthase, fatty acid synthesis, acetylation, cytoplasm, fatty acid biosynthesis, hydrolase; 2.15A {Homo sapiens} PDB: 2jfk_A* 2jfd_A
Probab=99.29 E-value=2.2e-10 Score=131.56 Aligned_cols=316 Identities=15% Similarity=0.155 Sum_probs=186.1
Q ss_pred CCceEEEEeeeecCCCCcccChHHHHHHHhhhhc--CCcchHHHHHHHHHHcCCCcee-e------cCCCCcCCCCCCch
Q 011007 85 PRHVYLVDYACYKPPVTCRVPFATFMEHSRLILK--NNPKSVEFQMRILERSGLGEET-C------LPPAIHYIPPTPTM 155 (496)
Q Consensus 85 ~~~v~Iv~~~~y~P~~~~~v~~~~~~e~~~~~~~--~~~~~~~f~~~i~~~sGi~~r~-~------~~~~~~~~~~~~~~ 155 (496)
..+|-|+|+||-.|. . .+.++|.+.+.. +. .++...+| -....+...+. . +++... ..+-
T Consensus 3 ~~~IaIvGmg~r~P~--~-~~~~~~W~~l~~-g~~~~~~~~~~~---~~~~~~~~~~~g~~~~~~~FD~~~f----~i~~ 71 (965)
T 3hhd_A 3 GEEVVIAGMSGKLPE--S-ENLQEFWDNLIG-GVDMVTDDDRRW---KAGLYGLPRRSGKLKDLSRFDASFF----GVHP 71 (965)
T ss_dssp CCCEEEEEEEEEBTT--B-SSHHHHHHHHHT-TCCCEECSSSSS---CTTGGGCCSCEECCSCSSCCCTTTT----TCCH
T ss_pred CCCEEEEeeeEECCC--C-CCHHHHHHHHHc-CCCcccCCCccc---ccccccCcccccccCChhhcChhhc----CCCH
Confidence 467999999999998 3 688888887653 21 00000000 00000111111 0 111111 1111
Q ss_pred HHHH--HhHHHHHHHHHHHHHHHcCCCcCCcC----EEEeecc-CCC-------------------CCCcHHHHHHHHcC
Q 011007 156 EAAR--GEAELVIFSAMDSLLQKTGLKPKDID----ILIVNCS-LFS-------------------PTPSLSAMVINKYK 209 (496)
Q Consensus 156 ~~~~--~ea~~la~~Aa~~aL~~agi~p~dID----~LI~~ss-~~~-------------------~~Ps~a~~I~~~Lg 209 (496)
.+++ .....|+.+|+.++|+++|++|++|| .+++.++ .++ ..+..+.+|+..||
T Consensus 72 ~ea~~mDp~~rL~leaa~eALedAGi~~~~i~~~~~Gv~vG~~~~d~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~lg 151 (965)
T 3hhd_A 72 KQAHTMDPQLRLLLEVTYEAIVDGGINPDSLRGTHTGVWVGVSGSETSEALSRDPETLVGYSMVGCQRAMMANRLSFFFD 151 (965)
T ss_dssp HHHHTSCHHHHHHHHHHHHHHHHTTCCGGGGTTSCCEEEEEECCCHHHHHHTSCTTTCCTHHHHHHSTTHHHHHHHHHHT
T ss_pred HHHhhcCHHHHHHHHHHHHHHHHcCCChHHcCCceeEEEEeccchhHHHHHhcCccccCcccccccccchHHHHHHHHhC
Confidence 2221 22567999999999999999999999 6776643 222 23457899999999
Q ss_pred CCCCceeeEecCCCcchHHHHHHHHHHHHhcCCCCEEEEEEECCCCCC-----------------CccCCCccccccccc
Q 011007 210 LRSNIKSFNLSGMGCSAGLISIDLARDLLQVHPNSNAVVVSTEIITPN-----------------YYQGNERAMLLPNCL 272 (496)
Q Consensus 210 l~~~~~~~dl~g~gCsg~l~al~lA~~lL~~~~~~~aLVVs~E~~s~~-----------------~~~~~dr~~l~~~~l 272 (496)
++. ++++++ .+|++++.||++|.+.|++|..+.|||.++|.++.. .....++. ....
T Consensus 152 l~G--Ps~tvd-tACSSsl~Al~~A~~~I~~G~~d~aLagGv~~~~~p~~~~~~~~~~~ls~~g~~~~Fd~~a---dG~~ 225 (965)
T 3hhd_A 152 FRG--PSIALD-TACSSSLMALQNAYQAIHSGQCPAAIVGGINVLLKPNTSVQFLRLGMLSPEGTCKAFDTAG---NGYC 225 (965)
T ss_dssp CCS--CEEEEE-CGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCCHHHHHHHHHHTCBCTTCCCCTTBTTC---CSBC
T ss_pred CCC--Ceeeec-CchHHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHhccCcCCCCccccchhcc---CCcc
Confidence 974 899999 699999999999999999999999999999987520 00111112 3578
Q ss_pred cccccEEEEEeccCCcccccceeEeeEEEEEecCCcccccceeecccCCCceeeeechhHHHHHHHHhhhhhhhcCCCcc
Q 011007 273 FRMGGAAILLSNRRRNRSRAKYRLVHVVRTHKGADDKAYRCVFEEEDKEGKVGISLSKDLMAIAGEALKSNITTIGPLVL 352 (496)
Q Consensus 273 fgDGAaA~lLs~~~~~~~~~~~~L~~~~~t~~~~d~~~~~~~~~~~d~~G~~g~~ls~d~~~v~g~~l~~~i~~~gp~vl 352 (496)
+|||++|+||.+.+... + .|- .+..+....|+.....+..+ ...+
T Consensus 226 ~gEGagavvL~~l~~A~-~-i~a--~I~g~~~n~dg~~~~~~t~P----------------~~~~--------------- 270 (965)
T 3hhd_A 226 RSEGVVAVLLTKKSLAR-R-VYA--TILNAGTNTDGFKEQGVTFP----------------SGDI--------------- 270 (965)
T ss_dssp BBCEEEEEEEEEGGGCS-S-CSE--EEEEEEEEECCCCTTCTTSC----------------CHHH---------------
T ss_pred ccceEEEEEEecHHHcC-c-ccE--EEEeeeccCCCCCCCCCcCC----------------CHHH---------------
Confidence 99999999999765322 1 111 12223333333211111111 0000
Q ss_pred chhHHHHHHHHHHHHhhhcc-ccCCcccchhccccEEEeccCCHHHHH-----HHHHHcCCChhh-HhhhhhhhcccCCc
Q 011007 353 PASEQLLFLMTLIGRKIFNP-KWKPYIPDFKQAFEHFCIHAGGRAVID-----ELQKNLQLSAEH-VEASRMTLHRFGNT 425 (496)
Q Consensus 353 p~~e~~~~~~~~~~~~v~~~-~~~~~~p~~~~did~f~~H~~~~~v~~-----~i~~~Lgl~~e~-~~~S~~~l~r~GNt 425 (496)
| ....++.++. .+. .+|||++-.|-.|-.+-| .+.+.++-..++ +. --.+-..+||+
T Consensus 271 ----q-----~~~i~~Al~~Agl~------p~dIdyvEaHgTgT~~gD~~E~~Al~~~f~~~~~~~~~-vgs~Ks~iGH~ 334 (965)
T 3hhd_A 271 ----Q-----EQLIRSLYQSAGVA------PESFEYIEAHGTGTKVGDPQELNGITRALCATRQEPLL-IGSTKSNMGHP 334 (965)
T ss_dssp ----H-----HHHHHHHHHHTTCC------GGGEEEEECCCCCCTTHHHHHHHHHHHHHCSSCSSCEE-EECTHHHHCBC
T ss_pred ----H-----HHHHHHHHHHhCCC------HHHhccccccCCCCCCCCHHHHHHHHHHhcccCCCcee-eeccccccccc
Confidence 0 0112344442 343 389999999977754433 344555532211 10 01233457999
Q ss_pred cCCchHHHHHHH---HHhCCC-----------------------------CCCCEEEEEeechhHhhhheeeEee
Q 011007 426 SSSSLWYEMSYI---EEKGRM-----------------------------KKGDRVWQIAFGSGFKCNSAVWKCN 468 (496)
Q Consensus 426 sSaSi~~~La~~---~~~g~i-----------------------------~~Gd~Vll~~fG~G~~~~sav~r~~ 468 (496)
-+|+=...|... +++|.+ .+.+++..-+||.|-+-..++++--
T Consensus 335 ~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~~~~~~~~~v~~~~~~~~~~~a~v~sfG~gG~Nah~il~~~ 409 (965)
T 3hhd_A 335 EPASGLAALAKVLLSLEHGLWAPNLHFHSPNPEIPALLDGRLQVVDQPLPVRGGNVGINSFGFGGSNVHIILRPN 409 (965)
T ss_dssp GGGHHHHHHHHHHHHHHHTEECCCSSCCSBCTTCHHHHHTSEEECCSCEECCSCEEEEEEECTTSEEEEEEEEEC
T ss_pred hhhhhHHHHHHHHHHHhcCCcCCccCCCCCCccCcccccCceeecCCCccCCCCeEEEecccCCCceEEEEeccC
Confidence 998876665542 333321 1234678899999988788888754
No 75
>4egv_A Acetyl-COA acetyltransferase; NEW SUB-family, thiolase fold; 2.71A {Mycobacterium smegmatis}
Probab=98.98 E-value=3.5e-09 Score=114.00 Aligned_cols=93 Identities=10% Similarity=0.052 Sum_probs=77.5
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEeecc---CC----------CCCCcHHHHHHHHcCCCCCceeeEecCCCcchHH
Q 011007 162 AELVIFSAMDSLLQKTGLKPKDIDILIVNCS---LF----------SPTPSLSAMVINKYKLRSNIKSFNLSGMGCSAGL 228 (496)
Q Consensus 162 a~~la~~Aa~~aL~~agi~p~dID~LI~~ss---~~----------~~~Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l 228 (496)
+.+|+..|++++|+++|++|+|||-+|..+. .+ ...+.....++.++|++ ...++.+. ++|++++
T Consensus 42 ~~dL~a~Ai~~AL~dAGl~p~~Vd~vI~g~~~~~~~~~~~~~~~~~g~~~~~~~~va~~lGl~-~~~~~~~~-~~caSg~ 119 (520)
T 4egv_A 42 SVELATEAAKAALHDCGADADTVARAIDTVAGTRQFEISGPASAPLGVSSNYPRSVARNIGAD-PAHAVLEV-IGGQSPQ 119 (520)
T ss_dssp HHHHHHHHHHHHHHHTSSCHHHHHHHCCEEEECCC--------------CCHHHHHHHHHTCC-CSEEEECC-SSTTHHH
T ss_pred HHHHHHHHHHHHHHHhCcCHHHcceEEEEEeecccccccchhhhhhccccCHHHHHHHHcCCC-CceEEEec-CCCHHHH
Confidence 6789999999999999999999887764421 11 12346778899999998 47788888 6999999
Q ss_pred HHHHHHHHHHhcCCCCEEEEEEECCCCC
Q 011007 229 ISIDLARDLLQVHPNSNAVVVSTEIITP 256 (496)
Q Consensus 229 ~al~lA~~lL~~~~~~~aLVVs~E~~s~ 256 (496)
.++..|.+.|++|..+.||+.+.|.+|.
T Consensus 120 ~av~~AA~aI~aG~advvlAgG~EsMS~ 147 (520)
T 4egv_A 120 HLATEFGGKIAAGENDVVLIFGSENTST 147 (520)
T ss_dssp HHHHHHHHHHHTTSCSEEEEEEEECCC-
T ss_pred HHHHHHHHHHHcCCCCEEEEEEEEeccc
Confidence 9999999999999999999999999874
No 76
>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*
Probab=98.65 E-value=2.1e-07 Score=116.65 Aligned_cols=121 Identities=15% Similarity=0.144 Sum_probs=90.2
Q ss_pred hHHHHHHHHHHHHHHHcCCCcCCcC--------EEEeeccC-C------------------------CCCCcHHHHHHHH
Q 011007 161 EAELVIFSAMDSLLQKTGLKPKDID--------ILIVNCSL-F------------------------SPTPSLSAMVINK 207 (496)
Q Consensus 161 ea~~la~~Aa~~aL~~agi~p~dID--------~LI~~ss~-~------------------------~~~Ps~a~~I~~~ 207 (496)
....|+..|+.+||+++|++|++|+ .+++.++. . ......++.+...
T Consensus 2646 p~~rL~l~aa~eALedAGi~p~~l~~~~~~~~vGV~vG~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~is~~ 2725 (3089)
T 3zen_D 2646 RVALWNIVATVDAFLSSGFTPTELMRWVHPSQVASTQGTGMGGMTSMQTMYHGNLLGRAKPNDILQEVLPNVVAAHVMQS 2725 (3089)
T ss_dssp HHHHHHHHHHHHHHTTSCSCGGGHHHHSCGGGEEEEEEESSCCHHHHHHHHHHHHTTCCCCTTHHHHTSTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHhhcccCcceeEEEEeecCccHHHHHHHHHHHhcCCCccchhhccccccHHHHHHHHH
Confidence 3788999999999999999999885 35555431 1 1112456777764
Q ss_pred -cCCCCCceeeEecCCCcchHHHHHHHHHHHHhcCCCCEEEEEEECCCCCCCc--------------------------c
Q 011007 208 -YKLRSNIKSFNLSGMGCSAGLISIDLARDLLQVHPNSNAVVVSTEIITPNYY--------------------------Q 260 (496)
Q Consensus 208 -Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL~~~~~~~aLVVs~E~~s~~~~--------------------------~ 260 (496)
+|++ .++++++ .+|++++.||++|.+.|++|..+.|||.++|.++...+ .
T Consensus 2726 ~lGl~--GPs~tV~-tACSSsl~Al~~A~~~IrsG~~d~aLaGGve~ls~~~~~~f~~~~als~~~~~~~~~~sp~~~cr 2802 (3089)
T 3zen_D 2726 YVGGY--GAMVHPV-GACATAAVSVEEGVDKIKLGKADLVIAGGFDDLTLEAIIGFGDMAATADTEMMRAKGISDSKFSR 2802 (3089)
T ss_dssp TTCCC--SCEECCB-CTTCHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHHHHHHHHHHTCBCCHHHHHHTTCCTTTSCC
T ss_pred HcCCC--CCceeec-cchhhHHHHHHHHHHHHHCCCCCeeEEeeecccCHHHHHHHHHhhhhhcchhhhhccCCcccccC
Confidence 5996 4899999 59999999999999999999999999999998763100 0
Q ss_pred CCCccccccccccccccEEEEEeccC
Q 011007 261 GNERAMLLPNCLFRMGGAAILLSNRR 286 (496)
Q Consensus 261 ~~dr~~l~~~~lfgDGAaA~lLs~~~ 286 (496)
.-|+.. ..+++||||+|+||.+.+
T Consensus 2803 pFd~~~--dG~v~GEGAgavVL~~~e 2826 (3089)
T 3zen_D 2803 ANDRRR--LGFLEAQGGGTILLARGD 2826 (3089)
T ss_dssp SSBTTC--CCBCBBCEEEEEEEEEHH
T ss_pred ccccCC--CCEEEeccceEEEEeeHH
Confidence 001110 246789999999998754
No 77
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=98.12 E-value=0.00041 Score=86.97 Aligned_cols=250 Identities=16% Similarity=0.156 Sum_probs=153.1
Q ss_pred HHHHHHHHHHHHHHHcCCCcCC-----cCEEEeeccCCC----------C--------CC-cHHHHHHHHcCCCCCceee
Q 011007 162 AELVIFSAMDSLLQKTGLKPKD-----IDILIVNCSLFS----------P--------TP-SLSAMVINKYKLRSNIKSF 217 (496)
Q Consensus 162 a~~la~~Aa~~aL~~agi~p~d-----ID~LI~~ss~~~----------~--------~P-s~a~~I~~~Lgl~~~~~~~ 217 (496)
-..++.+++.++|+++|++|++ +++.+-++..++ . .+ ..|.+|...||++. +++
T Consensus 78 q~rl~l~~~~eAle~Ag~~~~~~~~~~~gv~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~~~l~G--ps~ 155 (2512)
T 2vz8_A 78 QLRMLLEVTYEAIVDGGINPASLRGTSTGVWVGVSSSDASEALSRDPETLVGYSMIGCQRAMMANRLSFFFDFKG--PSI 155 (2512)
T ss_dssp HHHHHHHHHHHHHGGGTCCGGGGTTCSCEEEEEECCCHHHHHTTSCTTTSCGGGGGGTSTTHHHHHHHHHHTCCS--CEE
T ss_pred HHHHHHHHHHHHHHHCCCChhhcCCCCeEEEEEeccHHHHHHHhcCccccCcceecccchhHHHHHHHHHhCCCC--Cce
Confidence 5678999999999999998754 444442222111 0 11 25789999999974 899
Q ss_pred EecCCCcchHHHHHHHHHHHHhcCCCCEEEEEEECCCCCC----------CccCC------CccccccccccccccEEEE
Q 011007 218 NLSGMGCSAGLISIDLARDLLQVHPNSNAVVVSTEIITPN----------YYQGN------ERAMLLPNCLFRMGGAAIL 281 (496)
Q Consensus 218 dl~g~gCsg~l~al~lA~~lL~~~~~~~aLVVs~E~~s~~----------~~~~~------dr~~l~~~~lfgDGAaA~l 281 (496)
.+. .+||+++.||++|.+.|++|..+.|||-+++.+... ....+ |..- ..+..|+|+++++
T Consensus 156 tv~-tACsSsl~Al~~A~~~l~~g~~d~al~gG~~~~~~p~~~~~~~~~~~ls~~g~c~~Fd~~a--dG~~~gEG~~~~v 232 (2512)
T 2vz8_A 156 TID-TACSSSLLALQSAYQAIRGGECSAAVVGGLNVLLKPNSSLQFMKLGMLSQDGTCRSFDAEG--TGYCRAEAVVAVL 232 (2512)
T ss_dssp EEE-CTTSTHHHHHHHHHHHHHTSSCSEEEEEEEECCCCHHHHHHHHHTTCBCTTCSCCSSSTTC--CCBCBBCEEEEEE
T ss_pred eec-cHhHHHHHHHHHHHHHHHcCCCCeeEEeEeccccCHHHHHHHccCCCCCCCCCCCCCCCCC--CCcceeeeEEEEE
Confidence 999 699999999999999999999999999999975320 11110 1110 2578999999999
Q ss_pred EeccCCcccccceeEeeEEE-EEecCCcccccceeecccCCCceeeeechhHHHHHHHHhhhhhhhcCCCccchhHHHHH
Q 011007 282 LSNRRRNRSRAKYRLVHVVR-THKGADDKAYRCVFEEEDKEGKVGISLSKDLMAIAGEALKSNITTIGPLVLPASEQLLF 360 (496)
Q Consensus 282 Ls~~~~~~~~~~~~L~~~~~-t~~~~d~~~~~~~~~~~d~~G~~g~~ls~d~~~v~g~~l~~~i~~~gp~vlp~~e~~~~ 360 (496)
|.+-..-. ++..+++ +....|+..-..+..| ...+ |
T Consensus 233 Lk~l~~A~-----~i~a~i~g~~~n~dg~~~~~~t~P----------------~~~~-------------------q--- 269 (2512)
T 2vz8_A 233 LTKKSLAR-----RVYATILNAGTNTDGSKEQGVTFP----------------SGDV-------------------Q--- 269 (2512)
T ss_dssp EEEGGGCS-----CCSEEEEEEEEEECCCCTTCSSSC----------------CHHH-------------------H---
T ss_pred EEEHHHCC-----cccEEEEEEEEcCCCCCCCCCCCC----------------CHHH-------------------H---
Confidence 98765322 1222222 2222333110011111 0000 0
Q ss_pred HHHHHHHhhhcc-ccCCcccchhccccEEEeccCCHHHHHHH-----HHHcCCChhh-HhhhhhhhcccCCccCCchHHH
Q 011007 361 LMTLIGRKIFNP-KWKPYIPDFKQAFEHFCIHAGGRAVIDEL-----QKNLQLSAEH-VEASRMTLHRFGNTSSSSLWYE 433 (496)
Q Consensus 361 ~~~~~~~~v~~~-~~~~~~p~~~~did~f~~H~~~~~v~~~i-----~~~Lgl~~e~-~~~S~~~l~r~GNtsSaSi~~~ 433 (496)
..+.++.++. .+. .+||+++-.|-.|-.+=|-+ .+.+|-...+ +. --.+=..+||+-+|+=...
T Consensus 270 --~~~i~~al~~ag~~------p~~i~yveaHGTgT~~gD~~E~~al~~~f~~~~~~~~~-igS~Ks~iGH~~~AaG~~~ 340 (2512)
T 2vz8_A 270 --EQLIRSLYAPAGPD------PESLEYIEAHGTGTKVGDPQELNGIVNALCATRREPLL-IGSTKSNMGHPEPASGVAA 340 (2512)
T ss_dssp --HHHHHTTSGGGSSC------TTSCCEEECCCCCCTTHHHHHHHHHHHHHCSCSSSCCE-EECHHHHHCBCGGGHHHHH
T ss_pred --HHHHHHHHHHcCCC------HHHCCEEEeecCCCCCCCHHHHHHHHHHhcccCCCCce-eecccccccccccccchhH
Confidence 0112344432 233 38999999999887665544 4556532211 10 0122346899999988877
Q ss_pred HHHH---HHhCCCC-----------------------------CCCEEEEEeechhHhhhheeeEee
Q 011007 434 MSYI---EEKGRMK-----------------------------KGDRVWQIAFGSGFKCNSAVWKCN 468 (496)
Q Consensus 434 La~~---~~~g~i~-----------------------------~Gd~Vll~~fG~G~~~~sav~r~~ 468 (496)
|... +++|.+. ++.++..-+||.|-+-+.++++--
T Consensus 341 ~ik~~l~l~~~~ipp~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~a~vnsfG~gG~Nah~il~~~ 407 (2512)
T 2vz8_A 341 LIKVLLSLEHGVWAPNLHYHTPNPEIPALQDGRLQVVDRPLPIRGGNVGINSFGFGGSNVHVILQPN 407 (2512)
T ss_dssp HHHHHHHHTTTBCCCCSSCCSCCTTSSSSSSSSCEECCSCCBCCSCCEEEEEEETTTEEEEEEEEEC
T ss_pred HHHHHHHHHCCCcCCCCCCCCCCccccccccCceEecCCCccCCCCeEEEeccCCCCceeEEEEccC
Confidence 7653 3333211 234678889999988888888753
No 78
>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Probab=97.81 E-value=2.6e-05 Score=91.40 Aligned_cols=121 Identities=10% Similarity=0.025 Sum_probs=85.4
Q ss_pred HHHHHHHHHHHHHHHcCCC-cCC---------cCEEEeecc-CCC-----------------------CCC-cHHHHHHH
Q 011007 162 AELVIFSAMDSLLQKTGLK-PKD---------IDILIVNCS-LFS-----------------------PTP-SLSAMVIN 206 (496)
Q Consensus 162 a~~la~~Aa~~aL~~agi~-p~d---------ID~LI~~ss-~~~-----------------------~~P-s~a~~I~~ 206 (496)
...++..|+.+||+++|++ |.+ ++.. +.++ .++ ..+ ..++.|..
T Consensus 1012 ~qrLaLeAa~EALedAGI~dP~ei~~~i~~s~vGV~-vGSg~Gg~~~l~~~~~~~~~~~~v~~~~l~~~~~nt~Aa~Vs~ 1090 (1688)
T 2pff_A 1012 ITLFVLVSVVEAFIASGITDPYEMYKYVHVSEVGNC-SGSGMGGVSALRGMFKDRFKDEPVQNDILQESFINTMSAWVNM 1090 (1688)
T ss_dssp STTHHHHHHHHHHTTTTCSSGGGGGGGTCCSCSCCC-CCCCSCCCSSHHHHHHSSSSCCCCCSTTHHHHCTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCChHHhccccCCceEEEE-ecccCCCHHHHHHHHHHHHhcCCCCcchhccccHHHHHHHHHH
Confidence 4568999999999999998 655 3333 3332 121 013 34556666
Q ss_pred -HcCCCCCceeeEecCCCcchHHHHHHHHHHHHhcCCCCEEEEEEECCCCCCCcc--------------------CCCcc
Q 011007 207 -KYKLRSNIKSFNLSGMGCSAGLISIDLARDLLQVHPNSNAVVVSTEIITPNYYQ--------------------GNERA 265 (496)
Q Consensus 207 -~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL~~~~~~~aLVVs~E~~s~~~~~--------------------~~dr~ 265 (496)
.||++ -+++.+. .+|++++.||++|.+.|++|..+.+||.++|.++...+. ++.+.
T Consensus 1091 ~~LGl~--GPs~TVd-tACASSL~AL~lA~~aIrsGeaDvaLVGGvE~msp~~~~~Fa~mgaLS~~~~e~a~G~~Pd~~c 1167 (1688)
T 2pff_A 1091 LLISSS--GPIKTPV-GACATSVESVDIGVETILSGKARICIVGGYDDFQEEGSFEFGNMKATSNTLEEFEHGRTPAEMS 1167 (1688)
T ss_dssp SSCCCC--CCCCCCC-CTTTTTHHHHHHHHHHHHTTTCSCBCCCCCCCCCTTTTTTTTTTSCSCCTTTTTTSSCCSSSSC
T ss_pred HHcCCc--CCeEEec-CCCchHHHHHHHHHHHHHCCCCCEEEEeeeccCCHHHHHHHHhccccccChhhhhcCCChhhcc
Confidence 58986 4899999 599999999999999999999999999999987641110 00000
Q ss_pred cc----ccccccccccEEEEEeccC
Q 011007 266 ML----LPNCLFRMGGAAILLSNRR 286 (496)
Q Consensus 266 ~l----~~~~lfgDGAaA~lLs~~~ 286 (496)
.. -..+.+||||+++||.+.+
T Consensus 1168 RPFd~~rdGfv~GEGAGavVLesle 1192 (1688)
T 2pff_A 1168 RPATTTRNGFMEAQGAGIQIIMQAD 1192 (1688)
T ss_dssp CSSSSSCCCCCCCSCCEEEEEECSH
T ss_pred CcCccCCCCCccccceEEEEeCcHH
Confidence 00 0256899999999998754
No 79
>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*
Probab=97.25 E-value=0.001 Score=80.28 Aligned_cols=122 Identities=11% Similarity=0.082 Sum_probs=85.7
Q ss_pred HHHHHHHHHHHHHHHcCCC-cCC----cC----EEEeeccC-C-------C----------------CCC-cHHHHHHHH
Q 011007 162 AELVIFSAMDSLLQKTGLK-PKD----ID----ILIVNCSL-F-------S----------------PTP-SLSAMVINK 207 (496)
Q Consensus 162 a~~la~~Aa~~aL~~agi~-p~d----ID----~LI~~ss~-~-------~----------------~~P-s~a~~I~~~ 207 (496)
...++..++.++|+++|++ |.+ |+ .+++.++. + + ..+ ..++.|...
T Consensus 1211 ~~~l~L~aa~eAL~dAGi~dp~e~~~~i~~s~vGv~vGs~~gg~~~~~~~~~~~~~~~~v~~~~~~~~~~n~~aa~is~~ 1290 (1887)
T 2uv8_A 1211 ITLFVLVSVVEAFIASGITDPYEMYKYVHVSEVGNCSGSGMGGVSALRGMFKDRFKDEPVQNDILQESFINTMSAWVNML 1290 (1887)
T ss_dssp HHHHHHHHHHHHHHHTTCSSGGGHHHHSCGGGEEECCEESSCCHHHHHHHHTTTTTTCCCCTTHHHHHSTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCChhhhhcccCCceeEEEeccCCccHHHHHHHHHHHHhcCCCCcchhhcchhhHHHHHHHHH
Confidence 5678999999999999994 766 22 33333331 1 0 012 356677774
Q ss_pred -cCCCCCceeeEecCCCcchHHHHHHHHHHHHhcCCCCEEEEEEECCCCCC---------Ccc-----------CCCccc
Q 011007 208 -YKLRSNIKSFNLSGMGCSAGLISIDLARDLLQVHPNSNAVVVSTEIITPN---------YYQ-----------GNERAM 266 (496)
Q Consensus 208 -Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL~~~~~~~aLVVs~E~~s~~---------~~~-----------~~dr~~ 266 (496)
||++. +++.+.+ +|++++.||++|.+.|++|..+.+||.+.|.++.. ... +..+..
T Consensus 1291 ~lgl~G--P~~tv~t-ACASsl~Al~~A~~~I~sG~advaLvGGvd~~~~~~~~~f~~m~als~~~~e~~~g~~p~~~~R 1367 (1887)
T 2uv8_A 1291 LISSSG--PIKTPVG-ACATSVESVDIGVETILSGKARICIVGGYDDFQEEGSFEFGNMKATSNTLEEFEHGRTPAEMSR 1367 (1887)
T ss_dssp TTCCCS--CCCCCCC-GGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHHHHHHHHHTTCBCCHHHHHHTTCCGGGSCC
T ss_pred HcCCcc--ceEEeec-ccccHHHHHHHHHHHHHcCCCCEEEEeeeccCChHHHHHHHHhhhhccchhhhcccCCCccCcC
Confidence 89974 8889994 99999999999999999999999999999986531 000 000000
Q ss_pred c----ccccccccccEEEEEeccC
Q 011007 267 L----LPNCLFRMGGAAILLSNRR 286 (496)
Q Consensus 267 l----~~~~lfgDGAaA~lLs~~~ 286 (496)
- -..+..|||++++||.+..
T Consensus 1368 Pfd~~r~Gfv~gEGag~vVL~~~~ 1391 (1887)
T 2uv8_A 1368 PATTTRNGFMEAQGAGIQIIMQAD 1391 (1887)
T ss_dssp TTBTTCCSBCBBCEEEEEEEEEHH
T ss_pred CCcccCCCcccccceEEEEEccHH
Confidence 0 0246789999999998754
No 80
>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*
Probab=97.05 E-value=0.0023 Score=77.15 Aligned_cols=122 Identities=11% Similarity=0.107 Sum_probs=85.9
Q ss_pred HHHHHHHHHHHHHHHcCCC-cCC----cC----EEEeeccC-C-------------------CC----CC-cHHHHHHHH
Q 011007 162 AELVIFSAMDSLLQKTGLK-PKD----ID----ILIVNCSL-F-------------------SP----TP-SLSAMVINK 207 (496)
Q Consensus 162 a~~la~~Aa~~aL~~agi~-p~d----ID----~LI~~ss~-~-------------------~~----~P-s~a~~I~~~ 207 (496)
...++..++.++|+++|++ |.+ |+ .+++.++. + +. .+ .+++.|...
T Consensus 1186 ~~~l~L~aa~eAL~~AGi~~p~e~~~~i~~s~vGv~vGsg~gg~~~~~~~~~~~~~~~~v~~~~~~~~~~n~~aa~vs~~ 1265 (1878)
T 2uv9_A 1186 VTLYVLVSVAEALLSSGITDPYEFYKYVHLSEVGNCIGSGVGGTSALRGMYKDRYLDKPVQKDILQESFVNTMAAWVNML 1265 (1878)
T ss_dssp HHHHHHHHHHHHHHTTTCSSGGGHHHHSCGGGEEEEEEESSCCHHHHHHHHTTTTTTCCCCSCTTGGGSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCCChhhhhcccCccceEEEEccCCccHHHHHHHHHHHHhcCCCCchhhhcchHHHHHHHHHHH
Confidence 5678999999999999998 765 22 33333321 1 00 12 346677774
Q ss_pred -cCCCCCceeeEecCCCcchHHHHHHHHHHHHhcCCCCEEEEEEECCCCCC---------Ccc-----------CCCccc
Q 011007 208 -YKLRSNIKSFNLSGMGCSAGLISIDLARDLLQVHPNSNAVVVSTEIITPN---------YYQ-----------GNERAM 266 (496)
Q Consensus 208 -Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL~~~~~~~aLVVs~E~~s~~---------~~~-----------~~dr~~ 266 (496)
||++. +++.+.+ +|++++.||++|.+.|++|..+.+||.+.|.++.. ... +..+..
T Consensus 1266 ~lg~~G--P~~tv~t-ACASsl~Al~~A~~~I~sG~advalvGGvd~~~~~~~~~f~~m~als~~~de~a~g~~p~~~~R 1342 (1878)
T 2uv9_A 1266 LLSSTG--PIKTPVG-ACATAVESLDVGYDTIMQGKARVCLVGGFDDFQEEGSYEFANMGATSNAKEEFARGREPGEMSR 1342 (1878)
T ss_dssp TCCCCC--CBCCBCC-GGGHHHHHHHHHHHHHTTTSCSEEEEEEEECCCHHHHHHHHHHTCBCCHHHHHTTTCCTTSSCC
T ss_pred hcCCCC--CeEEEcC-cchHHHHHHHHHHHHHHcCCCCEEEEeeeccCChHHHHHHHHhhhhccchhhhhcCCCcccCcC
Confidence 89874 8889995 99999999999999999999999999999986531 000 001100
Q ss_pred c----ccccccccccEEEEEeccC
Q 011007 267 L----LPNCLFRMGGAAILLSNRR 286 (496)
Q Consensus 267 l----~~~~lfgDGAaA~lLs~~~ 286 (496)
- -..+..|+|++++||.+..
T Consensus 1343 Pfd~~r~Gfv~gEGag~vVL~~~~ 1366 (1878)
T 2uv9_A 1343 PTSTTRNGFMESQGCGVQVIMTAQ 1366 (1878)
T ss_dssp SSBTTCCCBCBBCEEEEEEEEEHH
T ss_pred CCccCCCCCcccceeEEEEEeeHH
Confidence 0 0256889999999998754
No 81
>3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae}
Probab=94.24 E-value=0.17 Score=50.52 Aligned_cols=85 Identities=13% Similarity=0.125 Sum_probs=58.8
Q ss_pred HhHHHHHHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCCceeeEe---cCCCcchHHHHHHHHHH
Q 011007 160 GEAELVIFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSNIKSFNL---SGMGCSAGLISIDLARD 236 (496)
Q Consensus 160 ~ea~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~~~~~dl---~g~gCsg~l~al~lA~~ 236 (496)
+.+.....++++++|+++|++++|||.++.... .+.+-..++++||++++-...++ +++++++...+|+-+
T Consensus 220 ~~~~~~~~~~i~~~l~~~gl~~~did~~v~Hq~----~~~i~~~~~~~lgl~~ek~~~~l~~~GNt~sasi~~~L~~~-- 293 (323)
T 3il3_A 220 KLAVRELSNVVEETLLANNLDKKDLDWLVPHQA----NLRIITATAKKLEMDMSQVVVTLDKYANNSAATVPVALDEA-- 293 (323)
T ss_dssp HHHHHHHHHHHHHHHHTTTCCTTTCCEEEECCS----CHHHHHHHHHHTTCCGGGBCCCHHHHCBCGGGHHHHHHHHH--
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCC----CHHHHHHHHHHcCcCHHHhhccHhhcCchHHHHHHHHHHHH--
Confidence 345666778999999999999999999875432 24556789999999865333333 566777777776544
Q ss_pred HHhcC---CCCEEEEEEE
Q 011007 237 LLQVH---PNSNAVVVST 251 (496)
Q Consensus 237 lL~~~---~~~~aLVVs~ 251 (496)
++.+ +++++|+++.
T Consensus 294 -~~~g~~~~Gd~vll~~~ 310 (323)
T 3il3_A 294 -IRDGRIQRGQLLLLEAF 310 (323)
T ss_dssp -HHTTSSCTTCEEEEEEE
T ss_pred -HHcCCCCCCCEEEEEEE
Confidence 3343 4567776653
No 82
>3lma_A Stage V sporulation protein AD (spovad); NESG, structural genomics, PSI-2, protein structure initiative; 1.99A {Bacillus licheniformis} PDB: 3lm6_A
Probab=94.14 E-value=0.074 Score=53.73 Aligned_cols=116 Identities=15% Similarity=0.313 Sum_probs=71.6
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCC-------ceeeEecCC--------Ccch
Q 011007 162 AELVIFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSN-------IKSFNLSGM--------GCSA 226 (496)
Q Consensus 162 a~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~-------~~~~dl~g~--------gCsg 226 (496)
....++.++++.|+++|++|+|+|.|+.. .....--.+...+.+++|++.. ..-||-..+ |||+
T Consensus 205 maPaA~~ti~~~l~d~g~~~~d~D~ivtg-dL~q~g~~il~~l~~~~g~~~~~~~~dcg~~iy~~~~~~~~ggsg~~csa 283 (347)
T 3lma_A 205 MAPAAADTIKQHLEDLGRTPDDYDLILTG-DLSGVGSPILKDLLKEEGINVGTKHNDCGLMIYTPDQQVFAGGSGCACSA 283 (347)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCSEEEEE-SCHHHHHHHHHHHHHHTTCCCGGGEEEGGGTSSCC---------CCCCHH
T ss_pred chHHHHHHHHHHHHHhCCCHHHcCEEecC-ChHHHHHHHHHHHHHHcCCChhHCccccceEEecCCCcccCCCCccccHH
Confidence 34456777799999999999999999842 0101111345667888888742 223454445 8998
Q ss_pred HHHHHHHHHHHHhcCCCCEEEEEEECCC-CCC-CccCCCccccccccccccccEEEEEeccCCc
Q 011007 227 GLISIDLARDLLQVHPNSNAVVVSTEII-TPN-YYQGNERAMLLPNCLFRMGGAAILLSNRRRN 288 (496)
Q Consensus 227 ~l~al~lA~~lL~~~~~~~aLVVs~E~~-s~~-~~~~~dr~~l~~~~lfgDGAaA~lLs~~~~~ 288 (496)
.+..=.+-+. |+.+..+++|+|++-.. |+. +..++.- + |+ |=|+.++..+.+
T Consensus 284 ~v~~~~~~~~-~~~g~~~ril~~~tGalls~~~~~q~~si----p-~i----ah~v~~e~~~~~ 337 (347)
T 3lma_A 284 VVTFAHIFKE-IEAGRLNRVLVVATGALLSPTIIQQKESI----P-CI----AHGVVFERAERG 337 (347)
T ss_dssp HHHHHTHHHH-HHTTSCSEEEEEEEEECCCHHHHHTTCCC----C-EE----EEEEEEEEC---
T ss_pred HHHHHHHHHH-HhcCcccEEEEEecccccCcchhccCCcc----C-hh----hEEEEEEeeccc
Confidence 8877777777 55677899999998875 431 1112111 1 22 567888875543
No 83
>1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2
Probab=93.69 E-value=0.25 Score=49.32 Aligned_cols=82 Identities=11% Similarity=0.194 Sum_probs=53.3
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCC-ceee---EecCCCcchHHHHHHHHHHH
Q 011007 162 AELVIFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSN-IKSF---NLSGMGCSAGLISIDLARDL 237 (496)
Q Consensus 162 a~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~-~~~~---dl~g~gCsg~l~al~lA~~l 237 (496)
+..-..++++++|+++|++++|||.++.... ....-..+.++||++.+ -... +++++++++...+|.-+
T Consensus 229 ~~~~~~~~i~~aL~~agl~~~did~v~~H~~----~~~~~d~i~~~lg~~~~~~~~~~~~~~Gn~~sAs~~~~L~~~--- 301 (339)
T 1mzj_A 229 AVADVVPAAREALEVAGLTVGDLVAFVPHQA----NLRIIDVLVDRLGVPEHVVVSRDAEDTGNTSSASVALALDRL--- 301 (339)
T ss_dssp HHHHHHHHHHHHHHTTTCCGGGCSEEEECCS----CHHHHHHHHHHHTCCTTSEECCTHHHHCBCTTHHHHHHHHHH---
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEECCC----CHHHHHHHHHHhCCCccceeeehhhhcCchHHHHHHHHHHHH---
Confidence 3456778899999999999999999875522 11223458899999754 2211 35667777777776543
Q ss_pred HhcC---CCCEEEEEE
Q 011007 238 LQVH---PNSNAVVVS 250 (496)
Q Consensus 238 L~~~---~~~~aLVVs 250 (496)
++.+ +++++|+++
T Consensus 302 ~~~g~~~~G~~vll~~ 317 (339)
T 1mzj_A 302 VRSGAVPGGGPALMIG 317 (339)
T ss_dssp HHHTSSCTTCEEEEEE
T ss_pred HHcCCCCCCCEEEEEE
Confidence 3433 345555554
No 84
>2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa}
Probab=93.62 E-value=0.2 Score=49.76 Aligned_cols=82 Identities=13% Similarity=0.184 Sum_probs=53.6
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCCceee---EecCCCcchHHHHHHHHHHHH
Q 011007 162 AELVIFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSNIKSF---NLSGMGCSAGLISIDLARDLL 238 (496)
Q Consensus 162 a~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~~~~~---dl~g~gCsg~l~al~lA~~lL 238 (496)
+.+...++++++|+++|++++|||.++.... ....-..+.++||++.+-... .++++++++...+|..+ +
T Consensus 222 ~~~~~~~~i~~aL~~agl~~~did~~~~H~~----~~~~~d~~~~~lg~~~~~~~~~~~~~Gnt~sAs~~~~L~~~---~ 294 (331)
T 2x3e_A 222 AVTQMSDSVRRVLDRVGWQASDLHHLVPHQA----NTRILAAVADQLDLPVERVVSNIAEVGNTVAASIPLALAHG---L 294 (331)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCSEEEECCC----CHHHHHHHHHHHTCCGGGBCCCHHHHCBCGGGHHHHHHHHH---H
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEcCC----CHHHHHHHHHHcCCCHHHHhhhHhhhCcHHHHHHHHHHHHH---H
Confidence 4466778899999999999999999875422 122334588999987432222 35566777777766544 4
Q ss_pred hcC---CCCEEEEEE
Q 011007 239 QVH---PNSNAVVVS 250 (496)
Q Consensus 239 ~~~---~~~~aLVVs 250 (496)
+.+ +++++|+++
T Consensus 295 ~~~~~~~G~~vll~~ 309 (331)
T 2x3e_A 295 RQGILRDGGNMVLTG 309 (331)
T ss_dssp HTTCSCTTCEEEEEE
T ss_pred HhCCCCCCCEEEEEE
Confidence 443 345666554
No 85
>4ewp_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; transferase; 2.20A {Micrococcus luteus nctc 2665}
Probab=93.61 E-value=0.16 Score=51.03 Aligned_cols=87 Identities=10% Similarity=0.097 Sum_probs=58.9
Q ss_pred HhHHHHHHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCCceee-E---ecCCCcchHHHHHHHHH
Q 011007 160 GEAELVIFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSNIKSF-N---LSGMGCSAGLISIDLAR 235 (496)
Q Consensus 160 ~ea~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~~~~~-d---l~g~gCsg~l~al~lA~ 235 (496)
+.+.....++++++|+++|++++|||.++... ..+..-..++++||++++-... + .+|+++++...+|+-+.
T Consensus 245 ~~a~~~~~~~i~~~L~~~gl~~~did~~v~Hq----~~~~i~~~~~~~Lgl~~~~~~~~~l~~~GNtssasi~~~L~~~~ 320 (350)
T 4ewp_A 245 RWAVWSMAKVAREALDAAGVEPEDLAAFIPHQ----ANMRIIDEFAKQLKLPESVVVARDIADAGNTSAASIPLAMHRLL 320 (350)
T ss_dssp HHHHHTHHHHHHHHHHHHTCCGGGEEEEEECC----SCHHHHHHHHHHTTCCTTSEECCTHHHHCBCGGGHHHHHHHHHH
T ss_pred HHHHHhhhHHHHHHHHhhcCChhHhceEEecC----CCHHHHHHHHHHcCcChHhEEecccccccchHHHHHHHHHHHHH
Confidence 34556677889999999999999999988542 2344567799999998653222 2 46677888777775543
Q ss_pred HHHhcCCCCEEEEEE
Q 011007 236 DLLQVHPNSNAVVVS 250 (496)
Q Consensus 236 ~lL~~~~~~~aLVVs 250 (496)
+==+..+++++|+++
T Consensus 321 ~~g~~~~Gd~vll~~ 335 (350)
T 4ewp_A 321 EENPELSGGLALQIG 335 (350)
T ss_dssp HHCGGGTTSEEEEEE
T ss_pred HhCCCCCcCEEEEEE
Confidence 311122456777665
No 86
>3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A*
Probab=93.16 E-value=0.23 Score=50.30 Aligned_cols=84 Identities=15% Similarity=0.260 Sum_probs=57.9
Q ss_pred hHHHHHHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCCceeeE---ecCCCcchHHHHHHHHHHH
Q 011007 161 EAELVIFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSNIKSFN---LSGMGCSAGLISIDLARDL 237 (496)
Q Consensus 161 ea~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~~~~~d---l~g~gCsg~l~al~lA~~l 237 (496)
.+.....++++++|+++|++++|||.+|... ..+.+-..++++||++++-...+ ..++++++...+|+-+.+-
T Consensus 251 ~~~~~~~~~i~~~L~~~gl~~~did~~v~Hq----~n~~i~~~~~~~lgl~~ek~~~~l~~~GNt~sAsi~l~L~~~~~~ 326 (359)
T 3h78_A 251 HASQTLVRIAGEMLAAHELTLDDIDHVICHQ----PNLRILDAVQEQLGIPQHKFAVTVDRLGNMASASTPVTLAMFWPD 326 (359)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGCSEEEECC----SCHHHHHHHHHHHTCCGGGBCCCHHHHCBCGGGHHHHHHHHHGGG
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEECC----CCHHHHHHHHHHhCcCHHHhhhhhhcccchHHHHHHHHHHHHHHh
Confidence 4566677899999999999999999987542 23455678999999985433222 3567777777777654332
Q ss_pred HhcCCCCEEEEEE
Q 011007 238 LQVHPNSNAVVVS 250 (496)
Q Consensus 238 L~~~~~~~aLVVs 250 (496)
..+++++|+++
T Consensus 327 --l~~Gd~vll~~ 337 (359)
T 3h78_A 327 --IQPGQRVLVLT 337 (359)
T ss_dssp --SCTTCEEEEEE
T ss_pred --CCCCCEEEEEE
Confidence 23456666665
No 87
>3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A
Probab=93.15 E-value=0.32 Score=48.80 Aligned_cols=90 Identities=9% Similarity=0.109 Sum_probs=59.8
Q ss_pred HHhHHHHHHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCCceee---EecCCCcchHHHHHHHHH
Q 011007 159 RGEAELVIFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSNIKSF---NLSGMGCSAGLISIDLAR 235 (496)
Q Consensus 159 ~~ea~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~~~~~---dl~g~gCsg~l~al~lA~ 235 (496)
.+.+.....++++++|+++|++++|||.++... ..+.+-..++++||++++-... +.+++++++...+|+-+.
T Consensus 241 ~~~~~~~~~~~i~~~l~~~gl~~~did~~v~Hq----~~~~i~~~~~~~lgl~~ek~~~~l~~~GNt~sasi~~~L~~~~ 316 (345)
T 3s21_A 241 LIEGIKLAQKTFVAAKQVLGWAVEELDQFVIHQ----VSRPHTAAFVKSFGIDPAKVMTIFGEHGNIGPASVPIVLSKLK 316 (345)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCCGGGCSEEEECC----SCHHHHHHHHHHHTCCGGGBCCCHHHHCBCGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHCCEEEeCC----CCHHHHHHHHHHcCcCHHHceeeHhhcCchHHHHHHHHHHHHH
Confidence 344566777888999999999999999998543 2234567799999998543222 245677777777776544
Q ss_pred HHHhcCCCCEEEEEEEC
Q 011007 236 DLLQVHPNSNAVVVSTE 252 (496)
Q Consensus 236 ~lL~~~~~~~aLVVs~E 252 (496)
+-=+..+++++|+++.-
T Consensus 317 ~~g~~~~Gd~vll~~~G 333 (345)
T 3s21_A 317 ELGRLKKGDRIALLGIG 333 (345)
T ss_dssp HHTCCCTTCEEEEEEEE
T ss_pred HcCCCCCCCEEEEEEEC
Confidence 32112345677776643
No 88
>1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A
Probab=93.13 E-value=0.35 Score=47.87 Aligned_cols=86 Identities=10% Similarity=0.252 Sum_probs=52.9
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCC-ceee---EecCCCcchHHHHHHHHHHH
Q 011007 162 AELVIFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSN-IKSF---NLSGMGCSAGLISIDLARDL 237 (496)
Q Consensus 162 a~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~-~~~~---dl~g~gCsg~l~al~lA~~l 237 (496)
+......+++++|+++|++|+|||.++.... .+..-..+.++||++.+ .... ...++++++...+|+.+..-
T Consensus 230 ~~~~~~~~i~~al~~agl~~~dId~~~~H~~----~~~~~~~~~~~lg~~~~~~~~~~~~~~Gnt~sAs~~~~L~~~~~~ 305 (335)
T 1u6e_A 230 AAFKMGDVGRRAMDAAGVRPDQIDVFVPHQA----NSRINELLVKNLQLRPDAVVANDIEHTGNTSAASIPLAMAELLTT 305 (335)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCCEEEECCS----CHHHHHHHHHHHTCCTTCEECCTHHHHCBCGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEECCC----CHHHHHHHHHHcCCCchhhhhhhhhhhCcHHHHHHHHHHHHHHHc
Confidence 3456778899999999999999999875421 12334458889999755 2221 23456666666555444321
Q ss_pred HhcCCCCEEEEEEE
Q 011007 238 LQVHPNSNAVVVST 251 (496)
Q Consensus 238 L~~~~~~~aLVVs~ 251 (496)
-+..+++++|+++.
T Consensus 306 ~~~~~g~~~l~~~~ 319 (335)
T 1u6e_A 306 GAAKPGDLALLIGY 319 (335)
T ss_dssp TSSCTTCEEEEEEE
T ss_pred CCCCCCCEEEEEEE
Confidence 11123456666553
No 89
>3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A
Probab=93.07 E-value=0.25 Score=50.07 Aligned_cols=84 Identities=12% Similarity=0.075 Sum_probs=57.1
Q ss_pred hHHHHHHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCCceee---EecCCCcchHHHHHHHHHHH
Q 011007 161 EAELVIFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSNIKSF---NLSGMGCSAGLISIDLARDL 237 (496)
Q Consensus 161 ea~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~~~~~---dl~g~gCsg~l~al~lA~~l 237 (496)
.+.....++++++|+++|++++|||.+|... ..+.+-..++++||++++-... +.+++++++...+|+-+
T Consensus 263 ~~~~~~~~~i~~~L~~~gl~~~did~~v~Hq----~n~~i~~~~~~~Lgl~~ek~~~~l~~~GNtssAsipl~L~~~--- 335 (365)
T 3gwa_A 263 FSLAEVPRAADRLLALAGEPRENIDCFVLHQ----ANRFMLDALRKKMKIPEHKFPVLMEHCGNTVSSTLPLALETM--- 335 (365)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGCSEEEECC----CCHHHHHHHHHHHTCCGGGSCCCCTTTCBCGGGHHHHHHHHH---
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEcC----CCHHHHHHHHHHhCCCHHHHHHHHhcccchHHHHHHHHHHHH---
Confidence 3566677889999999999999999998543 2344567899999998543333 33456666666666443
Q ss_pred HhcC---CCCEEEEEEE
Q 011007 238 LQVH---PNSNAVVVST 251 (496)
Q Consensus 238 L~~~---~~~~aLVVs~ 251 (496)
++.+ +++++|+++.
T Consensus 336 ~~~g~~~~Gd~vll~~f 352 (365)
T 3gwa_A 336 RANGTLARGMRLMLLGF 352 (365)
T ss_dssp HHTTCCCTTCEEEEEEE
T ss_pred HHcCCCCCCCEEEEEEE
Confidence 4443 3567776653
No 90
>4efi_A 3-oxoacyl-(acyl-carrier protein) synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.35A {Burkholderia xenovorans}
Probab=92.78 E-value=0.23 Score=50.17 Aligned_cols=86 Identities=9% Similarity=0.047 Sum_probs=59.8
Q ss_pred HhHHHHHHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCCceee---EecCCCcchHHHHHHHHHH
Q 011007 160 GEAELVIFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSNIKSF---NLSGMGCSAGLISIDLARD 236 (496)
Q Consensus 160 ~ea~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~~~~~---dl~g~gCsg~l~al~lA~~ 236 (496)
+.+.....++++++|+++|++++|||.++... ..+.+-..++++||++++-... +.+++++++...+|+-+..
T Consensus 240 ~~~~~~~~~~i~~~l~~~gl~~~did~~v~Hq----~~~~i~~~~~~~Lgl~~ek~~~~l~~~GNt~sasi~~~L~~~~~ 315 (354)
T 4efi_A 240 NFTLNAVPKLVSRTLDIAGRDKDSYDAFLFHQ----ANLFMLKHLAKKAGLPAERVPVNIGEYGNTSCASIPLLITTELK 315 (354)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCGGGCSEEEECC----CCHHHHHHHHHHTTCCGGGSCCCHHHHCBCGGGHHHHHHHHHSH
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEeCC----CCHHHHHHHHHHhCcCHHHHHHHHhhhCcHHHHHHHHHHHHHHH
Confidence 34567778889999999999999999998553 2334567799999998543322 3466778888888765532
Q ss_pred --HHhcCCCCEEEEEEE
Q 011007 237 --LLQVHPNSNAVVVST 251 (496)
Q Consensus 237 --lL~~~~~~~aLVVs~ 251 (496)
.++ +++++|+++.
T Consensus 316 ~g~~~--~Gd~vll~~f 330 (354)
T 4efi_A 316 DRLKE--ETLQLGMFGF 330 (354)
T ss_dssp HHHHH--SCEEEEEEEE
T ss_pred hCCCC--CCCEEEEEEE
Confidence 333 3456776653
No 91
>4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans}
Probab=92.70 E-value=0.36 Score=48.08 Aligned_cols=83 Identities=17% Similarity=0.147 Sum_probs=56.7
Q ss_pred hHHHHHHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCCceeeE---ecCCCcchHHHHHHHHHHH
Q 011007 161 EAELVIFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSNIKSFN---LSGMGCSAGLISIDLARDL 237 (496)
Q Consensus 161 ea~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~~~~~d---l~g~gCsg~l~al~lA~~l 237 (496)
.+.....++++++|+++|++++|||.++.... .+.+-..++++||++++-...+ .+++++++...+|+-+
T Consensus 231 ~~~~~~~~~i~~~l~~~gl~~~did~~~~Hq~----~~~i~~~~~~~lgl~~~~~~~~l~~~GNt~sasi~~~L~~~--- 303 (333)
T 4dfe_A 231 LAVNVLEKVAVEALEKANLSAEQIDWLIPHQA----NIRIMQSTCRKLGLPQERMIVTVGEHGNTSAASIPLALDVA--- 303 (333)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGCSEEEECCS----CHHHHHHHHHHTTCCGGGBCCCHHHHCBCGGGHHHHHHHHH---
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCC----CHHHHHHHHHHhCCCHHHhhhhHHhcCchHHHHHHHHHHHH---
Confidence 45566778899999999999999999875422 2345678999999985433222 3456777777776544
Q ss_pred HhcC---CCCEEEEEE
Q 011007 238 LQVH---PNSNAVVVS 250 (496)
Q Consensus 238 L~~~---~~~~aLVVs 250 (496)
++.+ +++++|+++
T Consensus 304 ~~~g~~~~Gd~vll~~ 319 (333)
T 4dfe_A 304 VRDGRIKRGQNVLIEG 319 (333)
T ss_dssp HHTTCSCTTCEEEEEE
T ss_pred HHcCCCCCCCEEEEEE
Confidence 4443 356666665
No 92
>1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A
Probab=92.68 E-value=0.42 Score=46.88 Aligned_cols=82 Identities=18% Similarity=0.239 Sum_probs=52.0
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCCceee---EecCCCcchHHHHHHHHHHHH
Q 011007 162 AELVIFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSNIKSF---NLSGMGCSAGLISIDLARDLL 238 (496)
Q Consensus 162 a~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~~~~~---dl~g~gCsg~l~al~lA~~lL 238 (496)
+..-...+++++|+++|++|+|||.++.... .+..-..+.+.||++.+-... .++++++++++.+|.-+ +
T Consensus 210 ~~~~~~~~i~~al~~agl~~~did~~~~H~~----~~~~~d~~~~~lg~~~~~~~~~~~~~Gh~~~as~~~~L~~~---~ 282 (313)
T 1zow_A 210 AVRIMGDASTRVVEKANLTSDDIDLFIPHQA----NIRIMESARERLGISKDKMSVSVNKYGNTSAASIPLSIDQE---L 282 (313)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGCSEEEECCS----CHHHHHHHHHHHTCCGGGBCCCHHHHCBCGGGHHHHHHHHH---H
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEcCC----CHHHHHHHHHHhCCCHHHHHHhHhhhCchHHHHHHHHHHHH---H
Confidence 4456778999999999999999999875422 112334578889986432211 24456777777666543 3
Q ss_pred hcC---CCCEEEEEE
Q 011007 239 QVH---PNSNAVVVS 250 (496)
Q Consensus 239 ~~~---~~~~aLVVs 250 (496)
+.+ +++++|+++
T Consensus 283 ~~~~~~~g~~vl~~~ 297 (313)
T 1zow_A 283 KNGKLKDDDTIVLVG 297 (313)
T ss_dssp HTTCCCTTCEEEEEE
T ss_pred HcCCCCCCCEEEEEE
Confidence 333 345666554
No 93
>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A*
Probab=92.25 E-value=0.52 Score=46.29 Aligned_cols=84 Identities=12% Similarity=0.097 Sum_probs=55.2
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCCcee---eEecCCCcchHHHHHHHHHHHH
Q 011007 162 AELVIFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSNIKS---FNLSGMGCSAGLISIDLARDLL 238 (496)
Q Consensus 162 a~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~~~~---~dl~g~gCsg~l~al~lA~~lL 238 (496)
+..-..++++++|+++|++|+|||.++.... ....-..+.++||++.+-.. -+++++++++...+|.-+ +
T Consensus 216 ~~~~~~~~i~~aL~~agl~~~did~v~~H~~----~~~~~d~i~~~lg~~~~~~~~~~~~~Gn~~~As~~~~L~~~---~ 288 (317)
T 1hnj_A 216 AVTELAHIVDETLAANNLDRSQLDWLVPHQA----NLRIISATAKKLGMSMDNVVVTLDRHGNTSAASVPCALDEA---V 288 (317)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGCCEEEECCS----CHHHHHHHHHHTTCCGGGBCCCHHHHCBCGGGHHHHHHHHH---H
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEcCC----CHHHHHHHHHHcCCCHHHhHhhHhhhCcHHHHHHHHHHHHH---H
Confidence 4456778999999999999999999875522 11223468899998743211 135567777777777544 4
Q ss_pred hcC---CCCEEEEEEEC
Q 011007 239 QVH---PNSNAVVVSTE 252 (496)
Q Consensus 239 ~~~---~~~~aLVVs~E 252 (496)
+.+ +++++|+++.-
T Consensus 289 ~~~~~~~G~~vll~~~G 305 (317)
T 1hnj_A 289 RDGRIKPGQLVLLEAFG 305 (317)
T ss_dssp HTTCSCTTCEEEEEEEE
T ss_pred HhCCCCCCCEEEEEEEc
Confidence 443 45677776643
No 94
>1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2
Probab=92.02 E-value=0.5 Score=46.56 Aligned_cols=68 Identities=15% Similarity=0.170 Sum_probs=44.9
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCCceee---EecCCCcchHHHHHHH
Q 011007 162 AELVIFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSNIKSF---NLSGMGCSAGLISIDL 233 (496)
Q Consensus 162 a~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~~~~~---dl~g~gCsg~l~al~l 233 (496)
+..-..++++++|+++|++|+|||.++..... ...-..+.+.||++.+-... .+++++++++..++..
T Consensus 218 ~~~~~~~~i~~al~~agl~~~did~~~~H~~~----~~~~d~~~~~lg~~~~~~~~~~~~~Gh~~~As~~~~l~~ 288 (322)
T 1ub7_A 218 AVRVMNTATLEAIEKAGLTPEDIRLFVPHQAN----LRIIDAARERLGLPWERVAVNVDRYGNTSTASIPLALKE 288 (322)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCSEEEECCSC----HHHHHHHHHTTTCCGGGBCCCHHHHCBCGGGHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCC----HHHHHHHHHHcCCCHHHHHHHHHhhCcHHHHHHHHHHHH
Confidence 44567789999999999999999998755321 12234588889986431111 3455666666666543
No 95
>2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus}
Probab=91.99 E-value=0.54 Score=45.87 Aligned_cols=83 Identities=12% Similarity=0.177 Sum_probs=52.9
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCCceee---EecCCCcchHHHHHHHHHHHH
Q 011007 162 AELVIFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSNIKSF---NLSGMGCSAGLISIDLARDLL 238 (496)
Q Consensus 162 a~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~~~~~---dl~g~gCsg~l~al~lA~~lL 238 (496)
..+...++++++|+++|++|+|||.++..... ...-..+.+.||++.+-... .++++++++++.+|.-+ +
T Consensus 208 ~~~~~~~~i~~al~~agl~~~did~~~~H~~~----~~~~~~~~~~lg~~~~~~~~~~~~~Gh~~~As~~~~L~~~---~ 280 (309)
T 2ebd_A 208 AVRSMEEVCREVLEKAGVKPEEVSLVIPHQAN----VRIINALAEKLNIPKEKVFVNIQKYGNTSAASIPIALHEA---I 280 (309)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCSEEEECCSC----HHHHHHHHHHTTCCGGGBCCCHHHHCBCGGGHHHHHHHHH---H
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCC----HHHHHHHHHHhCCCHHHhhhhHhhhcchHHHHHHHHHHHH---H
Confidence 44467789999999999999999998754221 11234578899986422111 34556777777766544 3
Q ss_pred hcC---CCCEEEEEEE
Q 011007 239 QVH---PNSNAVVVST 251 (496)
Q Consensus 239 ~~~---~~~~aLVVs~ 251 (496)
+.+ +++++|+++.
T Consensus 281 ~~g~~~~G~~~l~~~~ 296 (309)
T 2ebd_A 281 KEGKVKRGDLILMTAM 296 (309)
T ss_dssp HTTCCCTTCEEEEEEE
T ss_pred HcCCCCCCCEEEEEEE
Confidence 333 3466666653
No 96
>3s3l_A CERJ; acyltransferase, FABH homologue, KS III homologue, dimethyl transfer, transferase; 2.00A {Streptomyces tendae} PDB: 3t5y_A* 3t6s_A* 3t8e_A 3t5y_B*
Probab=91.96 E-value=0.28 Score=49.68 Aligned_cols=70 Identities=11% Similarity=0.076 Sum_probs=48.9
Q ss_pred hHHHHHHHHHHHHHHHcCCCcCCcCEEEe-eccCCCCCCcHHHHHHHHcCCCCCceeeE----ecCCCcchHHHHHHHHH
Q 011007 161 EAELVIFSAMDSLLQKTGLKPKDIDILIV-NCSLFSPTPSLSAMVINKYKLRSNIKSFN----LSGMGCSAGLISIDLAR 235 (496)
Q Consensus 161 ea~~la~~Aa~~aL~~agi~p~dID~LI~-~ss~~~~~Ps~a~~I~~~Lgl~~~~~~~d----l~g~gCsg~l~al~lA~ 235 (496)
.+.....++++++|+++|++++|||.+|+ ...... . ..++++||++.+-...+ .+++++++...+|+-+.
T Consensus 235 ~~~~~~~~~i~~~L~~~gl~~~did~~v~~hq~~~~-~----~~~~~~lgl~~ek~~~~~~~~~GNt~aAsipl~L~~~~ 309 (357)
T 3s3l_A 235 RYIDLLVAAKTQALEDAGTAIEDIAHAVIPVSRRGT-G----HELHDLLGLPDERTSWAYGRTTGHVGAGDQYAGLAHLV 309 (357)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGCSEEECCSCCCCS-S----CCHHHHHTSCGGGBTHHHHHHHCBCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEecCcChHH-H----HHHHHHcCCCHHHhHHHhccccccchHhHHHHHHHHHH
Confidence 45667888999999999999999999995 433222 2 34788899985433322 45566777777775543
No 97
>4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile}
Probab=90.43 E-value=0.67 Score=47.34 Aligned_cols=76 Identities=24% Similarity=0.372 Sum_probs=49.7
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCCceeeEecC--------CCcchHHHHHHHHHHH
Q 011007 166 IFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSNIKSFNLSG--------MGCSAGLISIDLARDL 237 (496)
Q Consensus 166 a~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~~~~~dl~g--------~gCsg~l~al~lA~~l 237 (496)
...|++++|+++|++|+|||.+.++ .........+.+.||+.+ ..++++| .||+|....+.+..+|
T Consensus 296 ~~~ai~~al~~agl~~~dId~ve~~----d~fa~~~~~~~~~lg~~~--~~v~~~gg~~~~Gh~~gasG~~~~~~~~~~L 369 (395)
T 4e1l_A 296 PIPATRKALKKAGLSINDIDLIEAN----EAFAAQALAVKNELQIDS--SKLNVNGGAIALGHPIGASGARILVTLIYEM 369 (395)
T ss_dssp HHHHHHHHHHHTTCCGGGCSEEEEC----CSBHHHHHHHHHHHTCCG--GGBSTTCCHHHHCCCTTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEec----ChhHHHHHHHHHHhCCCC--CCCCcCCchhhcCCcHHHHHHHHHHHHHHHH
Confidence 3578999999999999999999854 112344566788899863 2344442 2577666666666665
Q ss_pred HhcCCCCEEEE
Q 011007 238 LQVHPNSNAVV 248 (496)
Q Consensus 238 L~~~~~~~aLV 248 (496)
-+.+ .++.|+
T Consensus 370 ~~~~-~~~gl~ 379 (395)
T 4e1l_A 370 QKRK-VETGLA 379 (395)
T ss_dssp HHHT-CSEEEE
T ss_pred HhcC-CCEEEE
Confidence 5442 344443
No 98
>1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A
Probab=90.24 E-value=0.35 Score=49.43 Aligned_cols=82 Identities=13% Similarity=0.239 Sum_probs=51.9
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCCcee-----e-EecCCCcchHHHHHHHHH
Q 011007 162 AELVIFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSNIKS-----F-NLSGMGCSAGLISIDLAR 235 (496)
Q Consensus 162 a~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~~~~-----~-dl~g~gCsg~l~al~lA~ 235 (496)
+.+-...+++++|+++|++++|||.++.... ....-..+.++||++.+-.. + +.+++++++...+|+-
T Consensus 285 ~~~~~~~~i~~aL~~agl~~~dId~~~~H~~----~~~i~d~~~~~lgl~~~k~~~s~~~~~~~GNt~sAsi~~~L~~-- 358 (393)
T 1ted_A 285 IFSGVAPVVTEMLWDNGLQISDIDLWAIHPG----GPKIIEQSVRSLGISAELAAQSWDVLARFGNMLSVSLIFVLET-- 358 (393)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGCSCEEECCS----CHHHHHHHHHHHTCCGGGGHHHHHHHHHHCBCTHHHHHHHHHH--
T ss_pred HHHHHHHHHHHHHHHcCCCHhHCCEEEECCC----cHHHHHHHHHHcCCCHHHHHHHHHHHHhhCCchHhHHHHHHHH--
Confidence 4556778899999999999999998876422 12334568889999754321 2 4555555555555543
Q ss_pred HHHhcC----CCCEEEEEE
Q 011007 236 DLLQVH----PNSNAVVVS 250 (496)
Q Consensus 236 ~lL~~~----~~~~aLVVs 250 (496)
+++.+ +++++|+++
T Consensus 359 -~~~~g~~~~~Gd~vll~~ 376 (393)
T 1ted_A 359 -MVQQAESAKAISTGVAFA 376 (393)
T ss_dssp -HHHSCSSSSSSEEEEEEE
T ss_pred -HHhcCccCCCCCeEEEEE
Confidence 33443 335555554
No 99
>1u0m_A Putative polyketide synthase; type III polyketide synthase, PKS, bacterial, thiolase fold, beta-alpha-beta-alpha fold, catalytic triad; HET: 15P; 2.22A {Streptomyces coelicolor} SCOP: c.95.1.2 c.95.1.2
Probab=89.82 E-value=0.28 Score=49.93 Aligned_cols=67 Identities=15% Similarity=0.177 Sum_probs=44.7
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCCcee------eEecCCCcchHHHHHHHH
Q 011007 163 ELVIFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSNIKS------FNLSGMGCSAGLISIDLA 234 (496)
Q Consensus 163 ~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~~~~------~dl~g~gCsg~l~al~lA 234 (496)
..-.. +++++|+++|++++|||.++..... ...-..+.++||++++-.. -.++++++++...+|.-+
T Consensus 252 ~~~~~-~i~~aL~~agl~~~dId~v~~H~~~----~~i~d~~~~~lgl~~~k~~~s~~~~~~~Gnt~sAsi~~~L~~~ 324 (382)
T 1u0m_A 252 EPLAP-ALKELAGEHGWDASDLDFYIVHAGG----PRILDDLSTFLEVDPHAFRFSRATLTEYGNIASAVVLDALRRL 324 (382)
T ss_dssp HHHHH-HHHHHHHTTSCCSSCCSCCEEECSH----HHHHHHHHHHSCSCGGGGHHHHHHHHHTCBCTTHHHHHHHHHH
T ss_pred HHHHH-HHHHHHHHcCCCHHHCCEEEECCCC----HHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchhhHHHHHHHHH
Confidence 34445 8999999999999999998865221 2233468899999754321 245556666666666444
No 100
>3ss6_A Acetyl-COA acetyltransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; HET: CSO; 1.70A {Bacillus anthracis}
Probab=88.43 E-value=0.78 Score=46.88 Aligned_cols=92 Identities=21% Similarity=0.313 Sum_probs=56.8
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCCceeeEecC--------CCcchHHHHHHHHHHH
Q 011007 166 IFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSNIKSFNLSG--------MGCSAGLISIDLARDL 237 (496)
Q Consensus 166 a~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~~~~~dl~g--------~gCsg~l~al~lA~~l 237 (496)
...|++++|+++|++|+|||.+.++- ........+.+.||+.+ ..++++| .||+|....+.+..+|
T Consensus 294 ~~~a~~~al~~agl~~~dId~ve~~d----~fa~~~~~~~~~lg~~~--~~v~~~gg~~~~GH~~gasG~~~~~~~~~~L 367 (394)
T 3ss6_A 294 PAPAIRKGLEKVDWSLEDADLLEINE----AFAAQYLAVEKELDLDR--EKVNVNGSGVGLGHPIGCTGARITVSLIHEL 367 (394)
T ss_dssp HHHHHHHHHHHHTCCGGGCSEEEECC----SBHHHHHHHHHHHTCCG--GGBSTTCCHHHHCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEeCC----chHHHHHHHHHHhCCCC--CCCCCCcchHhhCCcHHHHHHHHHHHHHHHH
Confidence 46789999999999999999998541 12345566788899863 3445553 1244444445555554
Q ss_pred HhcCCCCEEEEEEECCCCCCCccCCCccccccccccccccEEEEEec
Q 011007 238 LQVHPNSNAVVVSTEIITPNYYQGNERAMLLPNCLFRMGGAAILLSN 284 (496)
Q Consensus 238 L~~~~~~~aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAaA~lLs~ 284 (496)
-+. ..++.|+ +.|..|-.+.|+||++
T Consensus 368 ~~~-~~~~gl~--------------------~~c~ggG~g~a~~~e~ 393 (394)
T 3ss6_A 368 KRR-GLEKGIA--------------------SLCVGGGIGVALFIEA 393 (394)
T ss_dssp HHH-TCCEEEE--------------------EEEETTTEEEEEEEEE
T ss_pred Hhc-CCCEEEE--------------------EEccCcCceeEEEEEc
Confidence 333 2344443 3455555566777764
No 101
>1ulq_A Putative acetyl-COA acetyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 3.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1
Probab=88.25 E-value=1.5 Score=44.85 Aligned_cols=94 Identities=19% Similarity=0.324 Sum_probs=53.7
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCCceeeEecC--------CCcchHHHHHHHHHHH
Q 011007 166 IFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSNIKSFNLSG--------MGCSAGLISIDLARDL 237 (496)
Q Consensus 166 a~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~~~~~dl~g--------~gCsg~l~al~lA~~l 237 (496)
...|++++|+++|++|+|||.+=.+- .| ....-...+.||+.++-..+|++| .|++|....+.++.+|
T Consensus 298 ~~~a~~~al~~Agl~~~dId~ie~he-af---a~~~l~~~~~lg~~~~~~~vn~~Gg~~a~GHp~gAsG~~~~~~~~~~L 373 (401)
T 1ulq_A 298 PVPATRKALERAGLSFSDLGLIELNE-AF---AAQALAVLREWSLSMEDQRLNPNGGAIALGHPLGASGARILTTLVHEM 373 (401)
T ss_dssp HHHHHHHHHHHTTCCGGGCSEEEECC-SB---HHHHHHHHHHHTCCTTCTTBSTTCCHHHHCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEEec-ch---HHHHHHHHHHcCCCCCCCccCCCCcccccCCCcchHHHHHHHHHHHHH
Confidence 36899999999999999999986551 11 112223345688732223445443 1344444444444444
Q ss_pred HhcCCCCEEEEEEECCCCCCCccCCCccccccccccccccEEEEEec
Q 011007 238 LQVHPNSNAVVVSTEIITPNYYQGNERAMLLPNCLFRMGGAAILLSN 284 (496)
Q Consensus 238 L~~~~~~~aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAaA~lLs~ 284 (496)
+.++.+++|+ ++|.||-.++|+||++
T Consensus 374 -~~~~~~~gl~--------------------~~~~ggG~~~a~v~~~ 399 (401)
T 1ulq_A 374 -RRRKVQFGLA--------------------TMCIGVGQGIAVVVEG 399 (401)
T ss_dssp -HHTTCSEEEE--------------------EEEETTTEEEEEEEEE
T ss_pred -hhcCCCEEEE--------------------EeecCCcccEEEEEEe
Confidence 3332333332 3456666677888875
No 102
>3svk_A Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium avium}
Probab=87.76 E-value=1.2 Score=45.82 Aligned_cols=91 Identities=20% Similarity=0.354 Sum_probs=57.4
Q ss_pred HHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCCceeeEecC--------CCcchHHHHHHHHHHHH
Q 011007 167 FSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSNIKSFNLSG--------MGCSAGLISIDLARDLL 238 (496)
Q Consensus 167 ~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~~~~~dl~g--------~gCsg~l~al~lA~~lL 238 (496)
..|++++|+++|++|+|||.+-.+-. .....-...+.||+.+ ..++++| .|++|....+.+..+|=
T Consensus 308 ~~a~~~al~~Agl~~~dId~~e~hda----f~~~~l~~~~~lg~~~--~~vn~~Gg~~~~GHp~gasG~~~~~~~~~~L~ 381 (407)
T 3svk_A 308 TPATRKVLDRAGLTIDDIDLFELNEA----FASVVLKFQKDLNIPD--EKLNVNGGAIAMGHPLGATGAMITGTMVDELE 381 (407)
T ss_dssp HHHHHHHHHHHTCCGGGCSEEEECCS----BHHHHHHHHHHHTCCG--GGBSTTCCHHHHCBCGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEeCh----hHHHHHHHHHHhCCCC--CCCCCCCcHhheeCcHHHHHHHHHHHHHHHHH
Confidence 57899999999999999999976511 1123345678899863 3455553 24555555556666654
Q ss_pred hcCCCCEEEEEEECCCCCCCccCCCccccccccccccccEEEEEec
Q 011007 239 QVHPNSNAVVVSTEIITPNYYQGNERAMLLPNCLFRMGGAAILLSN 284 (496)
Q Consensus 239 ~~~~~~~aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAaA~lLs~ 284 (496)
+. ..++.|+ +.|..|-.+.|+||++
T Consensus 382 ~~-~~~~gl~--------------------~~c~ggG~g~a~~~e~ 406 (407)
T 3svk_A 382 RR-NARRALI--------------------TLCIGGGMGVATIIER 406 (407)
T ss_dssp HH-TCCEEEE--------------------EEECSSSCEEEEEEEE
T ss_pred hc-CCCEEEE--------------------EeeccCcceEEEEEEc
Confidence 33 2234432 3455666677777764
No 103
>3led_A 3-oxoacyl-acyl carrier protein synthase III; structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.45A {Rhodopseudomonas palustris}
Probab=87.50 E-value=1.1 Score=45.79 Aligned_cols=86 Identities=8% Similarity=0.152 Sum_probs=54.4
Q ss_pred HHhHHHHHHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHc-CC--CCCceee---EecCCCcchHHHHHH
Q 011007 159 RGEAELVIFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKY-KL--RSNIKSF---NLSGMGCSAGLISID 232 (496)
Q Consensus 159 ~~ea~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~L-gl--~~~~~~~---dl~g~gCsg~l~al~ 232 (496)
.+.+...+.++++++|+++|++++|||.+|... ..+.+-..+++++ |+ +.+-... +.+++++++...+|+
T Consensus 286 ~~~a~~~~~~~i~~~L~~~gl~~~dId~~v~Hq----an~~i~~~~~~~llgl~~~~~k~~~~l~~~GNtssAsipl~L~ 361 (392)
T 3led_A 286 FKEVVPLVSEMIIEHAREIGIDPHGLKRMWLHQ----ANINMNEIIGRKVLGRDPTRDENVIILDDYANTSSAGSIIAFH 361 (392)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCGGGCSEEEECS----SCHHHHHHHHHHHHTSCCCTTTBCCCHHHHCBCGGGHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHCcEEEEcC----CCHHHHHHHHHHhcCCCCCHHHHHHHHhhhCccHHHHHHHHHH
Confidence 345677788899999999999999999888432 2234556788885 75 3221111 346677777777776
Q ss_pred HHHHHHhcCCCCEEEEEE
Q 011007 233 LARDLLQVHPNSNAVVVS 250 (496)
Q Consensus 233 lA~~lL~~~~~~~aLVVs 250 (496)
.+..- ..+++++|+++
T Consensus 362 ~~~~~--~~~Gd~vll~g 377 (392)
T 3led_A 362 KHQDD--MAQGDLGLICS 377 (392)
T ss_dssp HCCTT--CCTTCEEEEEE
T ss_pred HHhCC--CCCCCEEEEEE
Confidence 54221 12345555554
No 104
>4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile}
Probab=86.61 E-value=0.88 Score=46.53 Aligned_cols=92 Identities=20% Similarity=0.321 Sum_probs=57.0
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCCceeeEecC--------CCcchHHHHHHHHHHH
Q 011007 166 IFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSNIKSFNLSG--------MGCSAGLISIDLARDL 237 (496)
Q Consensus 166 a~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~~~~~dl~g--------~gCsg~l~al~lA~~l 237 (496)
...|++++|+++|++|+|||.+-++- ..+.....+.+.||+.+ ..++++| .||+|....+.++.+|
T Consensus 297 ~~~a~~~al~~Agl~~~dId~ve~~d----~f~~~~~~~~~~lg~~~--~~~n~~gg~~~~GH~~gasG~~~~~~~~~~L 370 (396)
T 4dd5_A 297 PVPATKKALEAANMTIEDIDLVEANE----AFAAQSVAVIRDLNIDM--NKVNVNGGAIAIGHPIGCSGARILTTLLYEM 370 (396)
T ss_dssp HHHHHHHHHHHHTCCGGGCSEEEECC----SBHHHHHHHHHHHTCCT--TSBSTTCCHHHHCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEecC----hHHHHHHHHHHHhCCCC--CccCCCCchhhccCcHHHHHHHHHHHHHHHH
Confidence 46789999999999999999997541 12344556778889763 2334442 1344544455555554
Q ss_pred HhcCCCCEEEEEEECCCCCCCccCCCccccccccccccccEEEEEec
Q 011007 238 LQVHPNSNAVVVSTEIITPNYYQGNERAMLLPNCLFRMGGAAILLSN 284 (496)
Q Consensus 238 L~~~~~~~aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAaA~lLs~ 284 (496)
-.. ..++.| .+.|..|-.++|+||++
T Consensus 371 ~~~-~~~~gl--------------------~~~c~ggG~g~a~~~e~ 396 (396)
T 4dd5_A 371 KRR-DAKTGL--------------------ATLCIGGGMGTTLIVKR 396 (396)
T ss_dssp HHH-TCSEEE--------------------EEEEETTTEEEEEEEEC
T ss_pred Hhc-CCCeEE--------------------EEEcccCCceeEEEEeC
Confidence 433 233433 34566677778888763
No 105
>2h84_A Steely1; thiolase-fold, type III polyketide synthase, PKS, chalcone-S synthase superfamily, type I PKS; HET: P6G; 2.90A {Dictyostelium discoideum}
Probab=85.01 E-value=1.2 Score=44.89 Aligned_cols=81 Identities=17% Similarity=0.249 Sum_probs=52.8
Q ss_pred HHHHHHHHHHHHHHHcC------CCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCCcee------eEecCCCcchHHH
Q 011007 162 AELVIFSAMDSLLQKTG------LKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSNIKS------FNLSGMGCSAGLI 229 (496)
Q Consensus 162 a~~la~~Aa~~aL~~ag------i~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~~~~------~dl~g~gCsg~l~ 229 (496)
+.+....+++++|+++| ++++|||.+ .... ....-..+.++||++.+-.. -..+++++++...
T Consensus 265 ~~~~~~~~i~~~L~~ag~~~~~~l~~~did~~-~H~~----~~~i~d~~~~~lgl~~~k~~~s~~~~~~~Gnt~sasi~~ 339 (374)
T 2h84_A 265 IGSGIEAFVDTLLDKAKLQTSTAISAKDCEFL-IHTG----GKSILMNIENSLGIDPKQTKNTWDVYHAYGNMSSASVIF 339 (374)
T ss_dssp HHHHHHHHHHHHHHHHTTTSCSCCCSSSSEEE-ECCC----CHHHHHHHHHHTTCCGGGGHHHHHHHHHHCBCTTHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCccccCCChhhcCEe-ECCC----CHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchhhHHHH
Confidence 34556778999999999 999999998 4421 12334568899999754222 2455667777777
Q ss_pred HHHHHHHHHhcC-CCCEEEEEE
Q 011007 230 SIDLARDLLQVH-PNSNAVVVS 250 (496)
Q Consensus 230 al~lA~~lL~~~-~~~~aLVVs 250 (496)
+|+-+. +.+ +++++|+++
T Consensus 340 ~L~~~~---~~~~~Gd~vll~~ 358 (374)
T 2h84_A 340 VMDHAR---KSKSLPTYSISLA 358 (374)
T ss_dssp HHHHHH---TCSCCCSEEEEEE
T ss_pred HHHHHH---hhcCCCCeEEEEE
Confidence 665543 333 345565554
No 106
>2vu1_A Acetyl-COA acetyltransferase; acyltransferase, PHB biosynthesis, thiolase FOL; HET: CSO OPI; 1.51A {Zoogloea ramigera} PDB: 1nl7_A* 1ou6_A* 2vu0_A* 1m4s_A* 2vu2_A* 2wkv_A* 2wku_A* 1m1t_A 1m3k_A 1m1o_A 1m3z_A* 2vtz_A* 2wl5_A* 2wkt_A* 2wl4_A* 1m4t_A* 2wl6_A 1qfl_A* 1dlv_A* 1dlu_A* ...
Probab=83.70 E-value=2 Score=43.79 Aligned_cols=76 Identities=18% Similarity=0.254 Sum_probs=46.6
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCCceeeEecC--------CCcchHHHHHHHHHHH
Q 011007 166 IFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSNIKSFNLSG--------MGCSAGLISIDLARDL 237 (496)
Q Consensus 166 a~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~~~~~dl~g--------~gCsg~l~al~lA~~l 237 (496)
...|++++|+++|++|+|||.+-.+ ......+-.+.+.||+.+ ..++++| .|++|....+.++.+|
T Consensus 292 ~~~a~~~al~~agl~~~dId~ie~~----d~f~~~~l~~~~~lg~~~--~~vn~~gg~~~~GHp~gAsG~~~~~~~~~~L 365 (392)
T 2vu1_A 292 PIPASRKALERAGWKIGDLDLVEAN----EAFAAQACAVNKDLGWDP--SIVNVNGGAIAIGHPIGASGARILNTLLFEM 365 (392)
T ss_dssp HHHHHHHHHHHHTCCGGGCSEEEEC----CSBHHHHHHHHHHHCCCG--GGBSTTCCHHHHCCCGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEec----cccHHHHHHHHHHcCCCc--ccCCCCccHhhhCCChhhHHHHHHHHHHHHH
Confidence 4679999999999999999999754 122233344678899863 2334332 2445555555555554
Q ss_pred HhcCCCCEEEE
Q 011007 238 LQVHPNSNAVV 248 (496)
Q Consensus 238 L~~~~~~~aLV 248 (496)
-. ...+++|+
T Consensus 366 ~~-~~~~~gl~ 375 (392)
T 2vu1_A 366 KR-RGARKGLA 375 (392)
T ss_dssp HH-HTCSEEEE
T ss_pred hc-cCCCEEEE
Confidence 33 33445554
No 107
>1xpm_A 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA synthase, HMGS, coenzyme A, thiolase fold, condensing enzyme; HET: HMG CAA; 1.60A {Staphylococcus aureus subsp} SCOP: c.95.1.2 c.95.1.2 PDB: 1xpl_A* 1xpk_A* 1tvz_A 1txt_A*
Probab=82.78 E-value=1.2 Score=45.44 Aligned_cols=72 Identities=6% Similarity=0.011 Sum_probs=44.0
Q ss_pred HhHHHHHHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHc-----CCCCCc----------eeeEecCCCc
Q 011007 160 GEAELVIFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKY-----KLRSNI----------KSFNLSGMGC 224 (496)
Q Consensus 160 ~ea~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~L-----gl~~~~----------~~~dl~g~gC 224 (496)
+........+.+++|+++|++++|||.+++.... ..+-..+..++ |++++- ..-.++|+++
T Consensus 203 ~~~~~~~~~~~~~~L~~agl~~~did~~~~H~~~----~~~~~~~~~~l~~~~~~~~~e~~~~~~~~s~~~~~~~GN~~s 278 (396)
T 1xpm_A 203 DAYIRSFQQSWNEYAKRQGKSLADFASLCFHVPF----TKMGKKALESIIDNADETTQERLRSGYEDAVDYNRYVGNIYT 278 (396)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCGGGCSEEEECCSS----HHHHHHHHHTTGGGSCHHHHHHHHHHHHHHTTGGGGTCCCGG
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEecCCc----hHHHHHHHHHHHhhcccCCHHHHHHHhhhhhhhhhhcCchHH
Confidence 3455667889999999999999999999855211 11122233333 332110 1134677788
Q ss_pred chHHHHHHHHH
Q 011007 225 SAGLISIDLAR 235 (496)
Q Consensus 225 sg~l~al~lA~ 235 (496)
++...+|.-+.
T Consensus 279 aSi~l~L~~~l 289 (396)
T 1xpm_A 279 GSLYLSLISLL 289 (396)
T ss_dssp GHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 88777776543
No 108
>2iik_A 3-ketoacyl-COA thiolase, peroxisomal; fatty acid metabolism, structural genomics, structural genom consortium, SGC, transferase; 2.55A {Homo sapiens}
Probab=82.18 E-value=2.4 Score=43.71 Aligned_cols=92 Identities=29% Similarity=0.386 Sum_probs=56.5
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCCceeeEecC--------CCcchHHHHHHHHHHH
Q 011007 166 IFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSNIKSFNLSG--------MGCSAGLISIDLARDL 237 (496)
Q Consensus 166 a~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~~~~~dl~g--------~gCsg~l~al~lA~~l 237 (496)
...|++++|+++|++|+|||.+=.+.+ .+...-...+.||+.+ ..+|.+| .||+|....+.++.+|
T Consensus 315 ~~~a~~~al~~Agl~~~dId~vE~h~a----f~~~~~~~~~~lg~~~--~~vN~~GG~~a~GHp~GAsG~~~~~~~~~~L 388 (418)
T 2iik_A 315 PAYAIPVALQKAGLTVSDVDIFEINEA----FASQAAYCVEKLRLPP--EKVNPLGGAVALGHPLGCTGARQVITLLNEL 388 (418)
T ss_dssp HHHHHHHHHHHHTCCGGGEEEEEECCS----BHHHHHHHHHHHTCCG--GGBCTTCCHHHHCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHCCeeeeecc----chHHHHHHHHHcCCCc--cccCCCCCeeeecCChhhhHHHHHHHHHHHH
Confidence 356999999999999999999865531 2333445567788852 3455553 1345555555555555
Q ss_pred HhcCCCC-EEEEEEECCCCCCCccCCCccccccccccccccEEEEEec
Q 011007 238 LQVHPNS-NAVVVSTEIITPNYYQGNERAMLLPNCLFRMGGAAILLSN 284 (496)
Q Consensus 238 L~~~~~~-~aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAaA~lLs~ 284 (496)
-..+ .+ +.|+ +.|..|-.+.|+|+++
T Consensus 389 ~~~~-~~~~gl~--------------------~~c~ggG~g~a~~~e~ 415 (418)
T 2iik_A 389 KRRG-KRAYGVV--------------------SMCIGTGMGAAAVFEY 415 (418)
T ss_dssp HHHT-SCEEEEE--------------------EEEETTTEEEEEEEEE
T ss_pred HhcC-CCeeeEE--------------------EEeeccchhheEEEec
Confidence 4432 22 3332 3455566677888875
No 109
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana}
Probab=82.11 E-value=2.7 Score=47.90 Aligned_cols=78 Identities=13% Similarity=0.071 Sum_probs=56.9
Q ss_pred HhHHHHHHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCCceee------EecCCCcchHHHHHHH
Q 011007 160 GEAELVIFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSNIKSF------NLSGMGCSAGLISIDL 233 (496)
Q Consensus 160 ~ea~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~~~~~------dl~g~gCsg~l~al~l 233 (496)
+.+...+.++++++|+++|++++|||.++.... ...+-..+.++||++.+-... ..+|+++++...+|+-
T Consensus 860 ~~~~~~~~~~~~~al~~agl~~~did~~~~Hq~----~~~i~~~~~~~lgl~~~k~~~~~~~l~~~GNtssasi~~~L~~ 935 (979)
T 3tsy_A 860 TLISENVEKCLTQAFDPLGISDWNSLFWIAHPG----GPAILDAVEAKLNLDKKKLEATRHVLSEYGNMSSACVLFILDE 935 (979)
T ss_dssp HHHHHHHHHHHHHHHGGGTCCCGGGSEEEECCS----CHHHHHHHHHHHTCCTTTTHHHHHHHHHHCBCTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhcCCCCcccceEEECCC----ChHHHHHHHHHcCCChHHHHHHHHHHHHcCCcchhhHHHHHHH
Confidence 345666788999999999999999999875422 234567789999998643222 4577888888888887
Q ss_pred HHHHHhcC
Q 011007 234 ARDLLQVH 241 (496)
Q Consensus 234 A~~lL~~~ 241 (496)
+..-++.|
T Consensus 936 ~~~~~~~G 943 (979)
T 3tsy_A 936 MRKKSLKG 943 (979)
T ss_dssp HHHHHHHT
T ss_pred HHhhhccc
Confidence 76644443
No 110
>2d3m_A Pentaketide chromone synthase; chalcone synthase, polyketide synthase, transferase; HET: COA; 1.60A {Aloe arborescens} PDB: 2d51_A 2d52_A*
Probab=80.26 E-value=3.8 Score=41.88 Aligned_cols=69 Identities=17% Similarity=0.170 Sum_probs=47.9
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCE----EEeeccCCCCCCcHHHHHHHHcCCCCCcee------eEecCCCcchHHHHH
Q 011007 162 AELVIFSAMDSLLQKTGLKPKDIDI----LIVNCSLFSPTPSLSAMVINKYKLRSNIKS------FNLSGMGCSAGLISI 231 (496)
Q Consensus 162 a~~la~~Aa~~aL~~agi~p~dID~----LI~~ss~~~~~Ps~a~~I~~~Lgl~~~~~~------~dl~g~gCsg~l~al 231 (496)
+.+.+..+++++|+++|++++ ||. ++.... ....-..+.++||++.+-.. -..+++++++...+|
T Consensus 288 ~~~~~~~~i~~~L~~agl~~~-id~~di~~v~Hq~----~~~i~~~~~~~lgl~~~k~~~s~~~l~~~GNt~sAsi~~~L 362 (406)
T 2d3m_A 288 ISNNVEACLIDVFKSVGITPP-EDWNSLFWIPHPG----GRAILDQVEAKLKLRPEKFRAARTVLWDYGNMVSASVGYIL 362 (406)
T ss_dssp HHHHHHHHHHHHHHTTTCCCC-SSGGGSEEEECCS----CHHHHHHHHHHTTCCTTTTHHHHHHHHHHCBCGGGHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCCC-CCccceEEEECCC----CHHHHHHHHHHcCCCHHHHHHHHHHHHHcCCchhhHHHHHH
Confidence 455677889999999999998 887 654321 22334568899999865322 235567888888887
Q ss_pred HHHH
Q 011007 232 DLAR 235 (496)
Q Consensus 232 ~lA~ 235 (496)
+-+.
T Consensus 363 ~~~~ 366 (406)
T 2d3m_A 363 DEMR 366 (406)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7654
No 111
>4egv_A Acetyl-COA acetyltransferase; NEW SUB-family, thiolase fold; 2.71A {Mycobacterium smegmatis}
Probab=80.13 E-value=3.9 Score=43.41 Aligned_cols=80 Identities=18% Similarity=0.231 Sum_probs=55.4
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCC-ceeeEecC-------CCcchHHHHHHHHHHH
Q 011007 166 IFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSN-IKSFNLSG-------MGCSAGLISIDLARDL 237 (496)
Q Consensus 166 a~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~-~~~~dl~g-------~gCsg~l~al~lA~~l 237 (496)
...|++++|+++|++++|||++=++- ..|...-...+.||+..+ -...+++| -..++++.++--+-.-
T Consensus 319 ~~~a~~~al~~agl~~~did~~E~~d----AF~~~~l~~~~~lG~~~~~~~~~n~~Gg~~~~Ghp~~a~g~~~~~~~v~~ 394 (520)
T 4egv_A 319 SVTAVNEALRVAGIGLDDVAAFDLYS----CFPFPVFNICDGTGLATDDPRGLTLTGGLPFFGGLGNNYSMHGIAEAVNE 394 (520)
T ss_dssp HHHHHHHHHHHHTCCGGGEEEEEECC----SSSHHHHHHHHHHCCCTTCTTCSCSSCCHHHHCSCSSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHCCEEEEeC----CcHHHHHHHHHHhCCCCCCCCCcCCCcccccCCChHHHHHHHHHHHHHHH
Confidence 46789999999999999999986662 345667778889998532 22344432 3345566666555556
Q ss_pred HhcCCCCEEEEE
Q 011007 238 LQVHPNSNAVVV 249 (496)
Q Consensus 238 L~~~~~~~aLVV 249 (496)
|+.+..++.|+.
T Consensus 395 lr~~~~~~~L~~ 406 (520)
T 4egv_A 395 MRDKPGQFALVG 406 (520)
T ss_dssp HHHSTTCEEEEE
T ss_pred HhcCCCCceEEe
Confidence 676677887774
No 112
>3ho9_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, platensimycin, platencin A1, KAS2, acyltransferase, fatty acid biosynthesis; HET: N3A; 1.90A {Escherichia coli} PDB: 3hnz_A* 3ho2_A* 3i8p_A* 3g11_A* 2gfx_A* 3g0y_A* 2gfv_A* 2gfw_A 2gfy_A* 1kas_A 1b3n_A
Probab=79.46 E-value=2.1 Score=44.05 Aligned_cols=76 Identities=13% Similarity=0.057 Sum_probs=46.1
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEee-ccCCCCCCcHHHHHHHHcCCCCC-cee----eEecCCCcchHHHHHHHHHHHHh
Q 011007 166 IFSAMDSLLQKTGLKPKDIDILIVN-CSLFSPTPSLSAMVINKYKLRSN-IKS----FNLSGMGCSAGLISIDLARDLLQ 239 (496)
Q Consensus 166 a~~Aa~~aL~~agi~p~dID~LI~~-ss~~~~~Ps~a~~I~~~Lgl~~~-~~~----~dl~g~gCsg~l~al~lA~~lL~ 239 (496)
...|++++|+++|++|+|||.+... |++..-.+.....+.+.||.+.+ +.. -.++....++|+..+-.+...|+
T Consensus 294 ~~~ai~~al~~Agl~~~dId~ve~HgtgT~~~d~~e~~a~~~~~g~~~~~~~v~s~k~~~GH~~gAsG~~~~i~~~~~l~ 373 (427)
T 3ho9_A 294 AALAMANALRDAGIEASQIGYVNAHGTSTPAGDKAEAQAVKTIFGEAASRVLVSSTKSMTGHLLGAAGAVESIYSILALR 373 (427)
T ss_dssp HHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHGGGGGTSEEECTHHHHCBCGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHccEEEecCCcCCCcCHHHHHHHHHHhcccCCCeEEecchHhhccCHHHHHHHHHHHHHHHHh
Confidence 5678999999999999999999855 55433344556667777775321 111 11223334455555554444455
Q ss_pred cC
Q 011007 240 VH 241 (496)
Q Consensus 240 ~~ 241 (496)
.+
T Consensus 374 ~~ 375 (427)
T 3ho9_A 374 DQ 375 (427)
T ss_dssp HT
T ss_pred cC
Confidence 43
No 113
>2wu9_A 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine oxidation, fatty acid metabolism, oxylipin biosynthesis, plant lipid metabolism; 1.50A {Arabidopsis thaliana} PDB: 2c7y_A 2c7z_A 2wua_A
Probab=78.43 E-value=4 Score=42.41 Aligned_cols=94 Identities=20% Similarity=0.274 Sum_probs=54.8
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEee-ccCCCCCCcHHHHHHHHcCCCCCceeeEecC--------CCcchHHHHHHHHHH
Q 011007 166 IFSAMDSLLQKTGLKPKDIDILIVN-CSLFSPTPSLSAMVINKYKLRSNIKSFNLSG--------MGCSAGLISIDLARD 236 (496)
Q Consensus 166 a~~Aa~~aL~~agi~p~dID~LI~~-ss~~~~~Ps~a~~I~~~Lgl~~~~~~~dl~g--------~gCsg~l~al~lA~~ 236 (496)
...|++++|+++|++|+|||.+=.+ |.+ + ......+.||+.+ ..+|++| .|++|....+.++.+
T Consensus 317 ~~~A~~~Al~~AGl~~~DId~iE~h~aft----~-~~l~~~~~lG~~~--~~vN~~GG~~a~GHp~GAsG~~~~~~~v~~ 389 (442)
T 2wu9_A 317 PAVAIPAAVKAAGLELDDIDLFEINEAFA----S-QFVYCRNKLGLDP--EKINVNGGAMAIGHPLGATGARCVATLLHE 389 (442)
T ss_dssp HHHHHHHHHHHTTCCGGGCCEEEECCSBH----H-HHHHHHHHHTCCG--GGBSTTCCHHHHCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEeCCCh----H-HHHHHHHHhCCCC--CCcCCCccHhhcCCchhHHHHHHHHHHHHH
Confidence 4589999999999999999988654 321 1 2233346788853 3455543 134444455555555
Q ss_pred HHhcCCCCEEEEEEECCCCCCCccCCCccccccccccccccEEEEEecc
Q 011007 237 LLQVHPNSNAVVVSTEIITPNYYQGNERAMLLPNCLFRMGGAAILLSNR 285 (496)
Q Consensus 237 lL~~~~~~~aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAaA~lLs~~ 285 (496)
|-...+ +-+.-+.++|.-|..++|+|+++.
T Consensus 390 Lr~~~~-------------------~~~~glas~~~GGG~~~a~v~~~~ 419 (442)
T 2wu9_A 390 MKRRGK-------------------DCRFGVVSMCIGTGMGAAAVFERG 419 (442)
T ss_dssp HHHHCT-------------------TCCEEEEEEEETTTEEEEEEEEEC
T ss_pred HhccCC-------------------CCCEEEEEeecccchheEEEEEec
Confidence 544331 011222244555666778888764
No 114
>3goa_A 3-ketoacyl-COA thiolase; metabolism, fatty acid, phospholipid, IDP01071, acyltransferase, cytoplasm, fatty acid metabolism; 1.70A {Salmonella typhimurium}
Probab=77.01 E-value=6.7 Score=39.73 Aligned_cols=94 Identities=24% Similarity=0.297 Sum_probs=54.9
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCC-CceeeEecC--------CCcchHHHHHHHHHH
Q 011007 166 IFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRS-NIKSFNLSG--------MGCSAGLISIDLARD 236 (496)
Q Consensus 166 a~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~-~~~~~dl~g--------~gCsg~l~al~lA~~ 236 (496)
...|++++|+++|++|+|||.+-.+-. .........+.||+.+ +...++++| .|++|....+.++.+
T Consensus 284 ~~~a~~~al~~agl~~~did~ve~h~~----f~~~~~~~~~~lg~~~~~~~~vn~~gg~~~~GH~~gasG~~~~~~~~~~ 359 (387)
T 3goa_A 284 PVPASKLALKKAGLSASDIDVFEMNEA----FAAQILPCIKDLGLMEQIDEKINLNGGAIALGHPLGCSGARISTTLINL 359 (387)
T ss_dssp HHHHHHHHHHHHTCCGGGCSEEEECCS----BHHHHHHHHHHTTCGGGHHHHBSTTCCHHHHCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEEeCc----chHHHHHHHHHhCCCcCCCccCCCCCchhcccCCHHHHHHHHHHHHHHH
Confidence 368999999999999999999975511 1123445667888721 123345443 134555555555555
Q ss_pred HHhcCCCCEEEEEEECCCCCCCccCCCccccccccccccccEEEEEec
Q 011007 237 LLQVHPNSNAVVVSTEIITPNYYQGNERAMLLPNCLFRMGGAAILLSN 284 (496)
Q Consensus 237 lL~~~~~~~aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAaA~lLs~ 284 (496)
|-+. ..++.|+ +.|.-|..+.|+||++
T Consensus 360 L~~~-~~~~gl~--------------------~~c~ggG~g~a~~~e~ 386 (387)
T 3goa_A 360 MERK-DAQFGLA--------------------TMCIGLGQGIATVFER 386 (387)
T ss_dssp HHHT-TCSEEEE--------------------EEEETTTEEEEEEEEC
T ss_pred HHhc-CCCEEEE--------------------EeccCcCceEEEEEEe
Confidence 5432 2233332 3455555567777764
No 115
>1wl4_A Acetyl-coenzyme A acetyltransferase 2; thiolase fold; HET: COA; 1.55A {Homo sapiens} PDB: 1wl5_A
Probab=74.20 E-value=4.5 Score=41.15 Aligned_cols=76 Identities=25% Similarity=0.403 Sum_probs=45.7
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCCceeeEecC--------CCcchHHHHHHHHHHH
Q 011007 166 IFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSNIKSFNLSG--------MGCSAGLISIDLARDL 237 (496)
Q Consensus 166 a~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~~~~~dl~g--------~gCsg~l~al~lA~~l 237 (496)
...|++++|+++|++|+|||.+-++- ......-.+.+.||+.+ ..++++| .|++|....+.++.+|
T Consensus 297 ~~~a~~~al~~Agl~~~dId~ie~~d----~f~~~~l~~~~~lg~~~--~~vn~~gg~~~~GHp~gAsG~~~~~~~~~~L 370 (397)
T 1wl4_A 297 PIPAIKQAVTKAGWSLEDVDIFEINE----AFAAVSAAIVKELGLNP--EKVNIEGGAIALGHPLGASGCRILVTLLHTL 370 (397)
T ss_dssp HHHHHHHHHHHHTCCGGGCCEEEECC----SBHHHHHHHHHHHTCCG--GGBSTTCCHHHHCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEec----ccHHHHHHHHHHcCCCC--cCcCCCcCccccCCChhhhHHHHHHHHHHHH
Confidence 46899999999999999999987541 12233345778899853 2344442 1344444444444444
Q ss_pred HhcCCCCEEEE
Q 011007 238 LQVHPNSNAVV 248 (496)
Q Consensus 238 L~~~~~~~aLV 248 (496)
-.. ..+++|+
T Consensus 371 ~~~-~~~~gl~ 380 (397)
T 1wl4_A 371 ERM-GRSRGVA 380 (397)
T ss_dssp HHH-TCCEEEE
T ss_pred hhc-CCCEEEE
Confidence 332 2344444
No 116
>1xho_A Chorismate mutase; southeast collaboratory for structural genomics, secsg, protein structure initiative, PSI, structural genomics; 2.20A {Clostridium thermocellum} SCOP: d.79.1.2
Probab=73.92 E-value=8.6 Score=33.56 Aligned_cols=56 Identities=14% Similarity=0.235 Sum_probs=41.3
Q ss_pred HHHHHHHHHHcCCCcCCcCEEEeeccCC--CCCCcHHHHHHHHcCCCCCceeeEecCCCcch
Q 011007 167 FSAMDSLLQKTGLKPKDIDILIVNCSLF--SPTPSLSAMVINKYKLRSNIKSFNLSGMGCSA 226 (496)
Q Consensus 167 ~~Aa~~aL~~agi~p~dID~LI~~ss~~--~~~Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg 226 (496)
.+-.++.+++.+++++||--++|..++| ...|..+++ ++|+. +++-++...|.=-|
T Consensus 54 ~ELl~eii~~N~l~~eDIvSv~FTvT~DL~A~FPA~aaR---~~Gw~-~VPLmc~qEm~V~g 111 (148)
T 1xho_A 54 QKLLKEMAEKNGLEEDDIISIIFTVTKDLDAAFPAIAAR---NMGWT-STALMCMNEIDVPG 111 (148)
T ss_dssp HHHHHHHHHHTTCCGGGEEEEEEEECTTCCSSCTHHHHH---HTTCT-TSEEEEEECCCCTT
T ss_pred HHHHHHHHHHcCCCHHHEEEEEEEeCCccCccChHHHHH---HcCCC-ccchhhcccCCCCC
Confidence 3344667788999999999999987765 667876655 56987 88888887644333
No 117
>1wdk_C 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: c.95.1.1 c.95.1.1 PDB: 1wdl_C* 1wdm_C* 2d3t_C*
Probab=72.23 E-value=6.6 Score=39.78 Aligned_cols=42 Identities=24% Similarity=0.323 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCC
Q 011007 166 IFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLR 211 (496)
Q Consensus 166 a~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~ 211 (496)
...|++++|+++|++|+|||.+-.+-. .......+.+.||+.
T Consensus 287 ~~~a~~~al~~Agl~~~dId~ve~~d~----f~~~~~~~~~~lg~~ 328 (390)
T 1wdk_C 287 PVPATQKALKRAGLNMADIDFIELNEA----FAAQALPVLKDLKVL 328 (390)
T ss_dssp HHHHHHHHHHHHTCCGGGCCEEEECCS----BHHHHHHHHHHTTCG
T ss_pred HHHHHHHHHHHcCCChhhCcEEEeccC----CHHHHHHHHHHcCCC
Confidence 368999999999999999999865411 112344567788875
No 118
>3euo_A Type III pentaketide synthase; alpha helix, acyltransferase, transferase; 1.75A {Neurospora crassa} PDB: 3eut_A* 3euq_A*
Probab=71.68 E-value=3.7 Score=41.64 Aligned_cols=71 Identities=14% Similarity=0.114 Sum_probs=50.1
Q ss_pred hHHHHHHHHHHHHHHH-------cCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCCceee------EecCCCcchH
Q 011007 161 EAELVIFSAMDSLLQK-------TGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSNIKSF------NLSGMGCSAG 227 (496)
Q Consensus 161 ea~~la~~Aa~~aL~~-------agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~~~~~------dl~g~gCsg~ 227 (496)
.+......+++++|++ +|++++|||.+ + ...-+.+-..++++||++++-... +.+|+++++.
T Consensus 261 ~~~~~~~~~i~~~L~~~~~~l~~~gl~~~did~~-~----Hq~n~~il~~v~~~Lgl~~ek~~~s~~~l~~~GNtssAsi 335 (379)
T 3euo_A 261 LAKASLQPTYADLLSSLQDQLPSSYQKPADFDWA-M----HPGGATILSGAESAMGLTPEHMRASYDRYINHGNSSSATI 335 (379)
T ss_dssp HHHHHHHHHHHHHHHHHGGGSCTTSCSGGGSEEE-E----CCSSHHHHHHHHHHHTCCGGGGHHHHHHHHHHCBCGGGHH
T ss_pred HHHHHHHHHHHHHHHhcCcccccccCChhHeeEE-e----CCCChHHHHHHHHHhCCCHHHHHHHHHHHHhcCccHHHHH
Confidence 3556667778888886 47999999954 2 122356778899999998654432 2367888888
Q ss_pred HHHHHHHHH
Q 011007 228 LISIDLARD 236 (496)
Q Consensus 228 l~al~lA~~ 236 (496)
..+|+-+..
T Consensus 336 ~~~L~~~~~ 344 (379)
T 3euo_A 336 FSVLNRLRE 344 (379)
T ss_dssp HHHHHHHTS
T ss_pred HHHHHHHHh
Confidence 888876643
No 119
>1tqy_A Beta-ketoacyl synthase/acyl transferase; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1
Probab=71.37 E-value=4.8 Score=41.24 Aligned_cols=76 Identities=11% Similarity=0.013 Sum_probs=43.6
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEee-ccCCCCCCcHHHHHHHHcCCCC-Ccee----eEecCCCcchHHHHHHHHHHHHh
Q 011007 166 IFSAMDSLLQKTGLKPKDIDILIVN-CSLFSPTPSLSAMVINKYKLRS-NIKS----FNLSGMGCSAGLISIDLARDLLQ 239 (496)
Q Consensus 166 a~~Aa~~aL~~agi~p~dID~LI~~-ss~~~~~Ps~a~~I~~~Lgl~~-~~~~----~dl~g~gCsg~l~al~lA~~lL~ 239 (496)
...+++++|+++|++|+|||.+... |++..-.|.-...+.+.+|.+. .+.. -.++....++|+..+-.+..-|+
T Consensus 285 ~~~ai~~al~~agl~~~dId~ve~Hgtgt~~gD~~E~~al~~~f~~~~~~~~v~s~k~~~GH~~~AaG~~~l~~~~l~l~ 364 (424)
T 1tqy_A 285 MAETIRVALDESRTDATDIDYINAHGSGTRQNDRHETAAYKRALGEHARRTPVSSIKSMVGHSLGAIGSLEIAACVLALE 364 (424)
T ss_dssp HHHHHHHHHHHHTCCGGGCCEEECCCCCCHHHHHHHHHHHHHHTGGGGGGSCEECTHHHHCBCTTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEecCccCcCcCHHHHHHHHHHhcccCCCCeeeccccccccChhhhHHHHHHHHHHHHH
Confidence 5688999999999999999998754 4332112333444566665321 1111 12333444555555555555555
Q ss_pred cC
Q 011007 240 VH 241 (496)
Q Consensus 240 ~~ 241 (496)
.+
T Consensus 365 ~~ 366 (424)
T 1tqy_A 365 HG 366 (424)
T ss_dssp HC
T ss_pred cC
Confidence 43
No 120
>3v4n_A HMG-COA synthase; hydroxymethylglutaryl-COA synthase, nitrosylation, transfera inhibitor complex; HET: BTB; 1.60A {Enterococcus faecalis} PDB: 3v4x_A* 1x9e_A 1ysl_B* 1ysl_A* 2hdb_A*
Probab=70.85 E-value=2 Score=43.92 Aligned_cols=75 Identities=13% Similarity=0.061 Sum_probs=45.9
Q ss_pred HHhHHHHHHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCC--cHH-------HHHHHHcCCCCCc---eeeEecCCCcch
Q 011007 159 RGEAELVIFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTP--SLS-------AMVINKYKLRSNI---KSFNLSGMGCSA 226 (496)
Q Consensus 159 ~~ea~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~P--s~a-------~~I~~~Lgl~~~~---~~~dl~g~gCsg 226 (496)
.+........+++++|+++|++++|||.+|+... +...+ +.. ..+.++||++.+- ..=.++|+++++
T Consensus 207 ~~~~~~~~~~~~~~~l~~~g~~~~did~~v~Hqp-~~k~~~ka~~ril~~~~~~~~~~l~~~~e~~~~~~~~~GN~~sAS 285 (388)
T 3v4n_A 207 NETYIQSFAQVWDEHKKRTGLDFADYDALAFHIP-YTKMGKKALLAKISDQTEAEQERILARYEESIIYSRRVGNLYTGS 285 (388)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCCGGGCSEEEECCS-SHHHHHHHHHHHSTTSCHHHHHHHHHHHHHHTTTGGGTCCCGGGH
T ss_pred HHHHHHHHHHHHHHHHHHhCCCHHHCCEEEeCCC-cchHHHHHHHHHHhcccHHHHHHhCCCHHHHhhHHHhcCchHHHH
Confidence 3446677788999999999999999999986531 10000 010 3456667654211 112346677777
Q ss_pred HHHHHHHH
Q 011007 227 GLISIDLA 234 (496)
Q Consensus 227 ~l~al~lA 234 (496)
...+|.-+
T Consensus 286 i~l~L~~~ 293 (388)
T 3v4n_A 286 LYLGLISL 293 (388)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 77776544
No 121
>1xes_A Dihydropinosylvin synthase; native structure, transferase; HET: 3IO; 1.70A {Pinus sylvestris} PDB: 1xet_A* 1u0u_A
Probab=69.53 E-value=11 Score=38.67 Aligned_cols=70 Identities=13% Similarity=0.085 Sum_probs=48.1
Q ss_pred HHHHHHHHHHHHHHHcCCC-cCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCCcee------eEecCCCcchHHHHHHHH
Q 011007 162 AELVIFSAMDSLLQKTGLK-PKDIDILIVNCSLFSPTPSLSAMVINKYKLRSNIKS------FNLSGMGCSAGLISIDLA 234 (496)
Q Consensus 162 a~~la~~Aa~~aL~~agi~-p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~~~~------~dl~g~gCsg~l~al~lA 234 (496)
+.+...++++++|+++|++ .+|| .+|.... .+.+-..++++||++++-.. -..+++++++...+|+.+
T Consensus 298 ~~~~~~~~i~~~L~~~gl~d~~di-~~v~Hq~----~~~i~~~~~~~Lgl~~ek~~~s~~~l~~~GNtssAsi~~~L~~~ 372 (413)
T 1xes_A 298 ISANIENCMVEAFSQFKISDWNKL-FWVVHPG----GRAILDRVEAKLNLDPTKLIPTRHVMSEYGNMSSACVHFILDQT 372 (413)
T ss_dssp HHHHHHHHHHHHHGGGTCCCGGGS-EEEECCS----CHHHHHHHHHHTTCCTTTTHHHHHHHHHHCBCGGGHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCCccce-eEEECCC----CHHHHHHHHHHcCCChHHhHHHHHHHHhcCcCchhhHHHHHHHH
Confidence 5566677899999999998 7787 4432211 23455668999999865332 246678888888888766
Q ss_pred HH
Q 011007 235 RD 236 (496)
Q Consensus 235 ~~ 236 (496)
..
T Consensus 373 ~~ 374 (413)
T 1xes_A 373 RK 374 (413)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 122
>3e1h_A PKSIIINC, putative uncharacterized protein; resorcinolic lipid synthase, type III PKS, acyltransferase, transferase; 2.58A {Neurospora crassa}
Probab=69.01 E-value=4.9 Score=42.10 Aligned_cols=71 Identities=13% Similarity=0.113 Sum_probs=49.5
Q ss_pred HhHHHHHHHHHHHHHHH-------cCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCCcee--eE----ecCCCcch
Q 011007 160 GEAELVIFSAMDSLLQK-------TGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSNIKS--FN----LSGMGCSA 226 (496)
Q Consensus 160 ~ea~~la~~Aa~~aL~~-------agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~~~~--~d----l~g~gCsg 226 (496)
+.+......+++++|++ +|++++|||.+ . ...-+.+-..|+++||++++-.. ++ .+|+++++
T Consensus 289 ~~a~~~v~~~i~~~L~~~g~~L~~agl~~~DId~~-~----Hqan~rIl~~v~~~Lgl~~ek~~~s~~~l~~yGNtsSAS 363 (465)
T 3e1h_A 289 VLAKASLQPTYADLLSSLQDQLPSSYQKPADFDWA-M----HPGGATILSGAESAMGLTPEHMRASYDRYINHGNSSSAT 363 (465)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGSCTTSCSGGGSEEE-E----CCSSHHHHHHHHHHHTCCGGGGHHHHHHHHHHCBCGGGH
T ss_pred HHHHHHHHHHHHHHHHhccccccccCCCHHHceEE-e----cCCChHHHHHHHHHhCcCHHHhHHHHHHHhcceechHhH
Confidence 34566677778888887 67999999954 2 12235667889999999865432 22 26788888
Q ss_pred HHHHHHHHH
Q 011007 227 GLISIDLAR 235 (496)
Q Consensus 227 ~l~al~lA~ 235 (496)
...+|+-+.
T Consensus 364 ip~aL~~~~ 372 (465)
T 3e1h_A 364 IFSVLNRLR 372 (465)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHHH
Confidence 888886654
No 123
>3kzu_A 3-oxoacyl-(acyl-carrier-protein) synthase II; seattle structural genomics center for infectious disease, ssgcid, acyltransferase; 1.75A {Brucella melitensis} PDB: 3e60_A
Probab=68.87 E-value=5 Score=41.28 Aligned_cols=45 Identities=18% Similarity=0.158 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEee-ccCCCCCCcHHHHHHHHcCCC
Q 011007 166 IFSAMDSLLQKTGLKPKDIDILIVN-CSLFSPTPSLSAMVINKYKLR 211 (496)
Q Consensus 166 a~~Aa~~aL~~agi~p~dID~LI~~-ss~~~~~Ps~a~~I~~~Lgl~ 211 (496)
...|++++|+++|++|+|||.+... |++ .-.+.....+.+.+|.+
T Consensus 295 ~~~ai~~al~~Agl~~~dId~ve~HgtgT-~~d~~e~~al~~~~g~~ 340 (428)
T 3kzu_A 295 AQRCMVAALKRAGIVPDEIDYINAHGTST-MADTIELGAVERVVGEA 340 (428)
T ss_dssp HHHHHHHHHHHHTCCGGGCCEEECCCCSS-TTHHHHHHHHHHHHGGG
T ss_pred HHHHHHHHHHHcCCCHHHeeEEEecCCcc-hhhHHHHHHHHHHhccC
Confidence 5688999999999999999999754 555 44455556677777764
No 124
>3ov2_A Curcumin synthase; type III polyketide synthase, transferase; 2.32A {Curcuma longa} PDB: 3ov3_A
Probab=68.39 E-value=6.3 Score=40.11 Aligned_cols=70 Identities=13% Similarity=0.155 Sum_probs=49.4
Q ss_pred HHHHHHHHHHHHHHHcCCCc-CCcCEEEeeccCCCCCCcHHHHHHHHcCCCCCceee------EecCCCcchHHHHHHHH
Q 011007 162 AELVIFSAMDSLLQKTGLKP-KDIDILIVNCSLFSPTPSLSAMVINKYKLRSNIKSF------NLSGMGCSAGLISIDLA 234 (496)
Q Consensus 162 a~~la~~Aa~~aL~~agi~p-~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~~~~~------dl~g~gCsg~l~al~lA 234 (496)
+.....++++++|+++|+++ +|| .+|... ..+.+-..++++||++++-... +.+|+++++...+|+.+
T Consensus 275 ~~~~~~~~i~~~L~~~gl~~~~di-~~v~Hq----~n~~i~~~v~~~Lgl~~ek~~~s~~~l~~~GNtssAsip~~L~~~ 349 (393)
T 3ov2_A 275 IADNLGRSLERALAPLGVREWNDV-FWVAHP----GNWAIIDAIEAKLQLSPDKLSTARHVFTEYGNMQSATVYFVMDEL 349 (393)
T ss_dssp HHTTSHHHHHHHHGGGTCCSGGGS-EEEECC----CCHHHHHHHHHHHTCCTTTTHHHHHHHHHHCBCGGGHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCcccCc-EEEECC----CChHHHHHHHHHcCCCHHHHHHHHHHHHHhCChHHhHHHHHHHHH
Confidence 44555678999999999997 887 544321 2345667899999998654433 35778888888888766
Q ss_pred HH
Q 011007 235 RD 236 (496)
Q Consensus 235 ~~ 236 (496)
..
T Consensus 350 ~~ 351 (393)
T 3ov2_A 350 RK 351 (393)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 125
>1ee0_A 2-pyrone synthase; polyketide synthase, thiolase fold, transferase; HET: CAA; 2.05A {Gerbera hybrid cultivar} SCOP: c.95.1.2 c.95.1.2 PDB: 1qlv_A
Probab=68.29 E-value=11 Score=38.25 Aligned_cols=70 Identities=17% Similarity=0.165 Sum_probs=48.1
Q ss_pred HHHHHHHHHHHHHHHcCCC-cCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCCcee------eEecCCCcchHHHHHHHH
Q 011007 162 AELVIFSAMDSLLQKTGLK-PKDIDILIVNCSLFSPTPSLSAMVINKYKLRSNIKS------FNLSGMGCSAGLISIDLA 234 (496)
Q Consensus 162 a~~la~~Aa~~aL~~agi~-p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~~~~------~dl~g~gCsg~l~al~lA 234 (496)
+.+....+++++|+++|++ .+|| .++.... ...+-..++++||++.+-.. -..+++++++...+|+-+
T Consensus 280 ~~~~~~~~i~~~L~~~gl~d~~di-~~v~Hq~----~~~i~~~~~~~lgl~~ek~~~s~~~l~~~GNtssAsi~~~L~~~ 354 (402)
T 1ee0_A 280 VAKNIENAAEKALSPLGITDWNSV-FWMVHPG----GRAILDQVERKLNLKEDKLRASRHVLSEYGNLISACVLFIIDEV 354 (402)
T ss_dssp HHHHHHHHHHHHHGGGTCCCGGGS-EEEECCS----SHHHHHHHHHHTTCCTTTTHHHHHHHHHHCBCGGGHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCccccc-eEEECCC----CHHHHHHHHHHcCCChHHhHHHHHHHHhcCCchhhHHHHHHHHH
Confidence 5566678899999999998 7887 4443321 23455668899999864322 235668888888888766
Q ss_pred HH
Q 011007 235 RD 236 (496)
Q Consensus 235 ~~ 236 (496)
.+
T Consensus 355 ~~ 356 (402)
T 1ee0_A 355 RK 356 (402)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 126
>2p0u_A Stilbenecarboxylate synthase 2; polyketide synthase, PKS type transferase; 1.90A {Marchantia polymorpha}
Probab=68.18 E-value=12 Score=38.14 Aligned_cols=70 Identities=16% Similarity=0.141 Sum_probs=48.1
Q ss_pred HHHHHHHHHHHHHHHcCCC-cCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCCcee------eEecCCCcchHHHHHHHH
Q 011007 162 AELVIFSAMDSLLQKTGLK-PKDIDILIVNCSLFSPTPSLSAMVINKYKLRSNIKS------FNLSGMGCSAGLISIDLA 234 (496)
Q Consensus 162 a~~la~~Aa~~aL~~agi~-p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~~~~------~dl~g~gCsg~l~al~lA 234 (496)
+.+....+++++|+++|++ .+|| .++... ..+.+-..++++||++++-.. -+.+++++++...+|+-+
T Consensus 293 ~~~~~~~~i~~~L~~~gl~d~~di-~~v~Hq----~~~~i~~~~~~~Lgl~~ek~~~s~~~l~~~GNtssAsi~~~L~~~ 367 (413)
T 2p0u_A 293 ITKNIGGFLKDTKNLVGASSWNEL-FWAVHP----GGPAILDQVEAKLELEKGKFQASRDILSDYGNMSSASVLFVLDRV 367 (413)
T ss_dssp HHHHHHHHHHHHHHHTTCCSGGGS-EEEECC----SSHHHHHHHHHHTTCCGGGGHHHHHHHHHHCBCGGGHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCCccce-EEEECC----CCHHHHHHHHHHhCCCHHHHHHHHHHHHHcCcchhhHHHHHHHHH
Confidence 5566778899999999997 7777 454332 123455668999999864322 245668888888888766
Q ss_pred HH
Q 011007 235 RD 236 (496)
Q Consensus 235 ~~ 236 (496)
.+
T Consensus 368 ~~ 369 (413)
T 2p0u_A 368 RE 369 (413)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 127
>1j3n_A 3-oxoacyl-(acyl-carrier protein) synthase II; condensing enzymes, fatty acid elongation, acyl-carrier protein (ACP); HET: CIT; 2.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1
Probab=68.11 E-value=2.4 Score=43.35 Aligned_cols=77 Identities=12% Similarity=0.058 Sum_probs=44.7
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEee-ccCCCCCCcHHHHHHHHcCCCC-Ccee----eEecCCCcchHHHHHHHHHHHH
Q 011007 165 VIFSAMDSLLQKTGLKPKDIDILIVN-CSLFSPTPSLSAMVINKYKLRS-NIKS----FNLSGMGCSAGLISIDLARDLL 238 (496)
Q Consensus 165 la~~Aa~~aL~~agi~p~dID~LI~~-ss~~~~~Ps~a~~I~~~Lgl~~-~~~~----~dl~g~gCsg~l~al~lA~~lL 238 (496)
-...+++++|+++|++|+|||.+... +.+..-.|.-...+.+.||.+. .+.. -+++....++|+..+-.+...|
T Consensus 276 ~~~~ai~~al~~Agl~~~dId~ve~Hgtgt~~gD~~E~~al~~~~g~~~~~~~v~s~k~~~GH~~~AsG~~~li~~~l~l 355 (408)
T 1j3n_A 276 GAALAMARALKDAGIAPEQVGYINAHGTSTPVGDRAEVLAIKRVFGDHAKRLMVSSTKSMIGHLLGAAGAVEAIATVQAL 355 (408)
T ss_dssp HHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHHHHHTTCEEECTHHHHCBCGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHcCEEEEeCCcCcccCHHHHHHHHHHhcCcCCCceEECchhhhccCHHHHHHHHHHHHHHHH
Confidence 35678999999999999999998754 3332112333455666666431 1211 1234444555665555555555
Q ss_pred hcC
Q 011007 239 QVH 241 (496)
Q Consensus 239 ~~~ 241 (496)
+.+
T Consensus 356 ~~~ 358 (408)
T 1j3n_A 356 YHG 358 (408)
T ss_dssp HHT
T ss_pred hcC
Confidence 543
No 128
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}
Probab=68.10 E-value=7.1 Score=38.88 Aligned_cols=36 Identities=22% Similarity=0.210 Sum_probs=29.5
Q ss_pred HHhHHHHHHHHHHHHHHHcCCCcCCcCEEEeeccCCC
Q 011007 159 RGEAELVIFSAMDSLLQKTGLKPKDIDILIVNCSLFS 195 (496)
Q Consensus 159 ~~ea~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~ 195 (496)
|+..+ ....+++++|+++|++++|||.|.++..|..
T Consensus 50 ~~H~~-~l~~~i~~~L~~ag~~~~did~Iav~~gPG~ 85 (334)
T 3eno_A 50 VHHSE-VIDTVISRALEKAKISIHDIDLIGFSMGPGL 85 (334)
T ss_dssp HHHHH-HHHHHHHHHHHHHTCCGGGCCEEEEECSSSC
T ss_pred HHHHH-HHHHHHHHHHHHcCCCHHHCCEEEEEcCCCC
Confidence 33344 4578999999999999999999998887764
No 129
>3r6m_A YEAZ, resuscitation promoting factor; actin/HSP70 nucleotide-binding fold, bacterial resuscitation BUT non-culturable state, Y YJEE; 3.10A {Vibrio parahaemolyticus}
Probab=67.47 E-value=5.4 Score=37.26 Aligned_cols=52 Identities=19% Similarity=0.234 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCC-----cHHHHHHHHcCCCCCceeeEec
Q 011007 165 VIFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTP-----SLSAMVINKYKLRSNIKSFNLS 220 (496)
Q Consensus 165 la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~P-----s~a~~I~~~Lgl~~~~~~~dl~ 220 (496)
.....++++|+++|++++|||.|.++..|+..+. +.+.-++..++ ++.+.++
T Consensus 38 ~L~p~i~~~L~~a~~~~~dld~Iav~~GPGsfTglRig~~~AkgLa~~~~----iPl~gVs 94 (213)
T 3r6m_A 38 KVLPMVDEVLKEAGLTLQDLDALAFGRGPGSFTGVRIGIGIAQGLAFGAE----LPMIGVS 94 (213)
T ss_dssp HHHHHHHHHHHTTTCCTTTCSEEEEEEESSCHHHHHHHHHHHHHHHHHTT----CCEEEEE
T ss_pred HHHHHHHHHHHHcCCCHHHccEEEEecCCCchhhHHHHHHHHHHHHHHhC----CCEEEEc
Confidence 3457899999999999999999999998875443 33444444444 4566676
No 130
>1i88_A CHS2, chalcone synthase 2; polyketide synthase, transferase; 1.45A {Medicago sativa} SCOP: c.95.1.2 c.95.1.2 PDB: 1i89_A 1i86_A 1i8b_A 1bi5_A 1cml_A* 1d6f_A* 1chw_A* 1cgz_A* 1cgk_A* 1bq6_A* 1jwx_A 1d6i_A 1d6h_A* 1u0v_A 1u0w_A* 1z1e_A* 1z1f_A*
Probab=67.34 E-value=12 Score=37.80 Aligned_cols=70 Identities=19% Similarity=0.214 Sum_probs=47.7
Q ss_pred HHHHHHHHHHHHHHHcCCC-cCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCCcee------eEecCCCcchHHHHHHHH
Q 011007 162 AELVIFSAMDSLLQKTGLK-PKDIDILIVNCSLFSPTPSLSAMVINKYKLRSNIKS------FNLSGMGCSAGLISIDLA 234 (496)
Q Consensus 162 a~~la~~Aa~~aL~~agi~-p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~~~~------~dl~g~gCsg~l~al~lA 234 (496)
+......+++++|+++|++ .+|| .++... ..+.+-..++++||++++-.. -..+++++++...+|+-+
T Consensus 275 ~~~~~~~~i~~~L~~~gl~d~~di-~~v~Hq----~~~~i~~~~~~~lgl~~ek~~~~~~~l~~~GNtssAsi~~~L~~~ 349 (389)
T 1i88_A 275 VSKNITKALVEAFEPLGISDYNSI-FWIAHP----GGPAILDQVEQKLALKPEKMNATREVLSEYGNMSSACVLFILDEM 349 (389)
T ss_dssp HHHHHHHHHHHHHGGGTCCCTTSS-EEEECC----SCHHHHHHHHHHHTCCGGGGHHHHHHHHHHCBCGGGHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCchhhc-eEEECC----CcHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchhhHHHHHHHHH
Confidence 5566678889999999997 7777 444332 123445668899999864322 245668888888888766
Q ss_pred HH
Q 011007 235 RD 236 (496)
Q Consensus 235 ~~ 236 (496)
..
T Consensus 350 ~~ 351 (389)
T 1i88_A 350 RK 351 (389)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 131
>3a5r_A Benzalacetone synthase; chalcone synthase, type III polyketide synthase, transferase, acyltransferase; HET: HC4; 1.60A {Rheum palmatum} PDB: 3a5q_A* 3a5s_A
Probab=67.21 E-value=10 Score=38.30 Aligned_cols=70 Identities=13% Similarity=0.143 Sum_probs=47.7
Q ss_pred HHHHHHHHHHHHHHHcCCC-cCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCCcee------eEecCCCcchHHHHHHHH
Q 011007 162 AELVIFSAMDSLLQKTGLK-PKDIDILIVNCSLFSPTPSLSAMVINKYKLRSNIKS------FNLSGMGCSAGLISIDLA 234 (496)
Q Consensus 162 a~~la~~Aa~~aL~~agi~-p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~~~~------~dl~g~gCsg~l~al~lA 234 (496)
+.+....+++++|+++|++ .+|| .++.... ....-..++++||++++-.. -..+++++++...+|+-+
T Consensus 271 ~~~~~~~~i~~~L~~~gl~d~~di-~~v~Hq~----~~~i~~~~~~~lgl~~ek~~~s~~~l~~~GNtssAsi~~~L~~~ 345 (387)
T 3a5r_A 271 ISNNIKTCLSDAFTPLNISDWNSL-FWIAHPG----GPAILDQVTAKVGLEKEKLKVTRQVLKDYGNMSSATVFFIMDEM 345 (387)
T ss_dssp HHHHHHHHHHHHHGGGTCCCGGGS-EEEECCS----CHHHHHHHHHHHTCCGGGGHHHHHHHHHHCBCGGGHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCChhhe-eEEECCC----CHHHHHHHHHHcCCChHHhHHHHHHHHhcCCcchhHHHHHHHHH
Confidence 5566678899999999998 8888 4443221 23445668899999754322 235568888888888766
Q ss_pred HH
Q 011007 235 RD 236 (496)
Q Consensus 235 ~~ 236 (496)
..
T Consensus 346 ~~ 347 (387)
T 3a5r_A 346 RK 347 (387)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 132
>3sqz_A Putative hydroxymethylglutaryl-COA synthase; thiolase fold, HMG_COA synthase, transferase; HET: COA; 1.20A {Streptococcus mutans} PDB: 3leh_A
Probab=67.20 E-value=3.5 Score=42.63 Aligned_cols=76 Identities=5% Similarity=-0.003 Sum_probs=46.9
Q ss_pred HHhHHHHHHHHHHHHHHHcCCCcCCcCEEEeeccC-CCCCCcH--------HHHHHHHcCCCCCc---eeeEecCCCcch
Q 011007 159 RGEAELVIFSAMDSLLQKTGLKPKDIDILIVNCSL-FSPTPSL--------SAMVINKYKLRSNI---KSFNLSGMGCSA 226 (496)
Q Consensus 159 ~~ea~~la~~Aa~~aL~~agi~p~dID~LI~~ss~-~~~~Ps~--------a~~I~~~Lgl~~~~---~~~dl~g~gCsg 226 (496)
.+........+++++|+++|++++|||.+|+.... .....+. ...++++||++.+- ..=.++|+++++
T Consensus 236 ~~~~~~~l~~~~~~~l~~~gl~~~Did~~v~Hqp~~k~~~ka~~ril~~~~~~~~~~~l~~~~e~~~~~~~~~GNt~sAS 315 (425)
T 3sqz_A 236 TKQYLDMLKTTWAEYQKRFDVSLTDFAAFCFHLPFPKLALKGFNKIMDKQVPSDLQEKLKVNFEASILYSKQIGNIYTGS 315 (425)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCGGGCSEEEECCSSHHHHHHHHHHHCCTTSCHHHHHHHHHHHHHHHTTHHHHBCCGGGH
T ss_pred HHHHHHHHHHHHHHHHHHhCCCHHHCCEEEECCCcchhHHHHHHHHHhccchHHHHHHhCCCHHHHhhHHhccCccHHHH
Confidence 34566777889999999999999999999865411 0000000 12456666665221 112456677887
Q ss_pred HHHHHHHH
Q 011007 227 GLISIDLA 234 (496)
Q Consensus 227 ~l~al~lA 234 (496)
...+|.-+
T Consensus 316 i~l~L~~~ 323 (425)
T 3sqz_A 316 LFLGLLSL 323 (425)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 77777544
No 133
>2a6a_A Hypothetical protein TM0874; glycoprotein endopeptidase, structural genomics, JOI for structural genomics, JCSG; 2.50A {Thermotoga maritima} SCOP: c.55.1.9 c.55.1.9
Probab=66.69 E-value=3.7 Score=38.54 Aligned_cols=57 Identities=19% Similarity=0.150 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCC-cHHHHHHHHcCCCCCceeeEec
Q 011007 164 LVIFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTP-SLSAMVINKYKLRSNIKSFNLS 220 (496)
Q Consensus 164 ~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~P-s~a~~I~~~Lgl~~~~~~~dl~ 220 (496)
+.....++++|+++|++++|||.|.++..|+..++ -.....++-|.+.-+++.+.++
T Consensus 47 e~L~p~i~~~L~~a~~~~~dld~Iav~~GPGsfTGlRiG~~~Ak~La~~~~iPl~gVs 104 (218)
T 2a6a_A 47 EILPVVVKKLLDELDLKVKDLDVVGVGIGPGGLTGLRVGIATVVGLVSPYDIPVAPLN 104 (218)
T ss_dssp GHHHHHHHHHHHHHTCCGGGCSEEEEECCSSCHHHHHHHHHHHHHHHGGGTCCEEEEC
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCchHhHHHHHHHHHHHHHHcCCCEEEeC
Confidence 34567889999999999999999999999876555 1222233333322245566666
No 134
>1dbf_A Protein (chorismate mutase); shikimate pathway, isomerase; 1.30A {Bacillus subtilis} SCOP: d.79.1.2 PDB: 1com_A 2chs_A 2cht_A* 1fnj_A 1fnk_A
Probab=65.32 E-value=14 Score=31.51 Aligned_cols=53 Identities=9% Similarity=0.229 Sum_probs=38.9
Q ss_pred HHHHHHHHHcCCCcCCcCEEEeeccCC--CCCCcHHHHHHHHc-CCCCCceeeEecCCCc
Q 011007 168 SAMDSLLQKTGLKPKDIDILIVNCSLF--SPTPSLSAMVINKY-KLRSNIKSFNLSGMGC 224 (496)
Q Consensus 168 ~Aa~~aL~~agi~p~dID~LI~~ss~~--~~~Ps~a~~I~~~L-gl~~~~~~~dl~g~gC 224 (496)
+-.++.+++.+++++||--++|+.++| ...|..+.+ ++ |+. +++-++...|.=
T Consensus 26 eLl~~i~~~N~l~~~dIvSv~FT~T~DL~a~FPA~aaR---~~~gw~-~VpL~c~qEm~V 81 (127)
T 1dbf_A 26 QLLEKIIEENHTKPEDVVQMLLSATPDLHAVFPAKAVR---ELSGWQ-YVPVTCMQEMDV 81 (127)
T ss_dssp HHHHHHHHHHCCCGGGEEEEEEEECTTCCSSCTHHHHH---TSTTCT-TSCEEEEECCCC
T ss_pred HHHHHHHHHcCCCHHHEEEEEEEeCCccCccChHHHHh---ccCCCC-ccchhhcccCCC
Confidence 344667788999999999999987765 667866555 56 776 788777775433
No 135
>4ddo_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgcid, struct genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia vietnamiensis} PDB: 4f32_A*
Probab=64.77 E-value=4 Score=42.33 Aligned_cols=45 Identities=13% Similarity=0.149 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEee-ccCCCCCCcHHHHHHHHcCC
Q 011007 166 IFSAMDSLLQKTGLKPKDIDILIVN-CSLFSPTPSLSAMVINKYKL 210 (496)
Q Consensus 166 a~~Aa~~aL~~agi~p~dID~LI~~-ss~~~~~Ps~a~~I~~~Lgl 210 (496)
...|++++|+++|++|+|||.+... |++..-.|.-...+.+.+|-
T Consensus 310 ~~~ai~~al~~Agl~~~dId~ve~Hgtgt~~~d~~E~~al~~~~~~ 355 (451)
T 4ddo_A 310 AMRAMKLALRMGDVAPEQVDYVNAHATSTPVGDAGEIEALKTVFGV 355 (451)
T ss_dssp HHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHCS
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEecCCcCcccCHHHHHHHHHHhCC
Confidence 5688999999999999999999755 43322223334456666665
No 136
>3awk_A Chalcone synthase-like polyketide synthase; type III polyketide synthase, transferase; 2.00A {Huperzia serrata} PDB: 3awj_A
Probab=64.26 E-value=15 Score=37.41 Aligned_cols=70 Identities=16% Similarity=0.163 Sum_probs=46.8
Q ss_pred HHHHHHHHHHHHHHHcCCC-cCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCCcee------eEecCCCcchHHHHHHHH
Q 011007 162 AELVIFSAMDSLLQKTGLK-PKDIDILIVNCSLFSPTPSLSAMVINKYKLRSNIKS------FNLSGMGCSAGLISIDLA 234 (496)
Q Consensus 162 a~~la~~Aa~~aL~~agi~-p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~~~~------~dl~g~gCsg~l~al~lA 234 (496)
+......+++++|+++|++ .+|| .++... ..+.+-..++++||++++-.. -+.+++++++...+|+-+
T Consensus 288 ~~~~~~~~i~~~L~~~gl~d~~di-~~v~Hq----~~~~i~~~~~~~lgl~~ek~~~s~~~l~~~GNtssAsi~~~L~~~ 362 (402)
T 3awk_A 288 ISKNIDKVLAEPLEYVHFPSYNDM-FWAVHP----GGPAILDQIEAKLGLSTDKMQASRDVLASYGNMSSASVLFVLDQI 362 (402)
T ss_dssp HHHHHHHHTHHHHHHTTCCCGGGE-EEEECC----SCHHHHHHHHHHTTCCTTTTHHHHHHHHHHCBCGGGHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCCccce-eEEECC----CcHHHHHHHHHHcCCCHHHHHHHHHHHHHcCCchhhHHHHHHHHH
Confidence 5555667889999999997 5665 343221 123445668899999865322 245668888888888766
Q ss_pred HH
Q 011007 235 RD 236 (496)
Q Consensus 235 ~~ 236 (496)
..
T Consensus 363 ~~ 364 (402)
T 3awk_A 363 RK 364 (402)
T ss_dssp HH
T ss_pred Hh
Confidence 44
No 137
>3il6_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; HET: B83; 2.50A {Enterococcus faecalis} PDB: 3il5_A* 3il4_A*
Probab=63.49 E-value=9.6 Score=37.44 Aligned_cols=67 Identities=13% Similarity=0.096 Sum_probs=40.3
Q ss_pred cCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCCceeeE---ecCCCcchHHHHHHHHHHHHhcCCC--CEEEEEEE
Q 011007 181 PKDIDILIVNCSLFSPTPSLSAMVINKYKLRSNIKSFN---LSGMGCSAGLISIDLARDLLQVHPN--SNAVVVST 251 (496)
Q Consensus 181 p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~~~~~d---l~g~gCsg~l~al~lA~~lL~~~~~--~~aLVVs~ 251 (496)
++|||.++.... .+..-..++++||++++-...+ .+++++++...+|+-+..-=+..++ +++|+++.
T Consensus 237 ~~did~~v~Hq~----~~~i~~~~~~~lgl~~ek~~~~l~~~GNt~sasi~~~L~~~~~~g~~~~G~~d~vll~~f 308 (321)
T 3il6_A 237 DETVDYLLLHQA----NVRIIDKIARKTKISREKFLTNMDKYGNTSAASIPILLDEAVENGTLILGSQQRVVLTGF 308 (321)
T ss_dssp GGGCSEEEECCS----CHHHHHHHHHHHTCCGGGBCCCGGGTCBCGGGHHHHHHHHHHHTTSSCTTSCCEEEEEEE
T ss_pred cccCCEEEEcCC----CHHHHHHHHHHcCcCHHHhhhhHhhcccHHHHHHHHHHHHHHHhCCCCCCCCCEEEEEEE
Confidence 899999985432 2345677999999985433333 3556666666666544331111245 66776653
No 138
>2gel_A Putative GRAM negative resuscitation promoting FA; YEAZ, RPF, actin-like-fold, glycoprotease, chaperone; 2.05A {Salmonella typhimurium} PDB: 2gem_A 1okj_A
Probab=62.15 E-value=6.6 Score=36.97 Aligned_cols=57 Identities=19% Similarity=0.207 Sum_probs=37.8
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCC-cHHHHHHHHcCCCCCceeeEec
Q 011007 164 LVIFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTP-SLSAMVINKYKLRSNIKSFNLS 220 (496)
Q Consensus 164 ~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~P-s~a~~I~~~Lgl~~~~~~~dl~ 220 (496)
+....+++++|+++|++++|||.|.++..|+..+. -.....++-|.+.-+++.+.++
T Consensus 36 ~~l~~~i~~~L~~a~~~~~did~Iav~~GPGsftglRig~~~ak~la~~~~~Pl~~V~ 93 (231)
T 2gel_A 36 QRILPMVQEILAASGASLNEIDALAFGRGPGSFTGVRIGIGIAQGLALGANLPMIGVS 93 (231)
T ss_dssp HHHHHHHHHHHHHTTCCGGGCSEEEEECCSSCHHHHHHHHHHHHHHHHTTTCCEEEEC
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEEcCCChhHhHHHHHHHHHHHHHHcCCCEEEec
Confidence 34678899999999999999999999998864432 1122233333222245566666
No 139
>2gqd_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; duplicated babababb fold, transferase; 2.30A {Staphylococcus aureus}
Probab=61.88 E-value=5.8 Score=40.92 Aligned_cols=46 Identities=20% Similarity=0.199 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEee-ccCCCCCCcHHHHHHHHcCC
Q 011007 165 VIFSAMDSLLQKTGLKPKDIDILIVN-CSLFSPTPSLSAMVINKYKL 210 (496)
Q Consensus 165 la~~Aa~~aL~~agi~p~dID~LI~~-ss~~~~~Ps~a~~I~~~Lgl 210 (496)
-...|++++|+++|++|+|||.+... |++..-.|.-...+...+|.
T Consensus 302 ~~~~ai~~Al~~Agl~p~dId~ve~HgtgT~~~D~~E~~al~~~fg~ 348 (437)
T 2gqd_A 302 GGSRAMQAAMDDAGIEPKDVQYLNAHGTSTPVGDLNEVKAIKNTFGE 348 (437)
T ss_dssp HHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHGG
T ss_pred HHHHHHHHHHHHcCCCHhhCCEEEEECCCCcCcCHHHHHHHHHHHhc
Confidence 35778999999999999999998754 43321123344556666664
No 140
>1e5m_A KAS II, beta ketoacyl acyl carrier protein synthase II; condensing enzyme, biosynthetic role, carbon-carbon bond formation; 1.54A {Synechocystis SP} SCOP: c.95.1.1 c.95.1.1
Probab=61.41 E-value=5.7 Score=40.63 Aligned_cols=45 Identities=16% Similarity=0.145 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEee-ccCCCCCCcHHHHHHHHcCC
Q 011007 166 IFSAMDSLLQKTGLKPKDIDILIVN-CSLFSPTPSLSAMVINKYKL 210 (496)
Q Consensus 166 a~~Aa~~aL~~agi~p~dID~LI~~-ss~~~~~Ps~a~~I~~~Lgl 210 (496)
...|++++|+++|++|+|||.+... |++..-.|.-...+.+.+|.
T Consensus 283 ~~~ai~~al~~agl~~~dId~ve~Hgtgt~~~D~~E~~al~~~~g~ 328 (416)
T 1e5m_A 283 ATRAIAWALKDSGLKPEMVSYINAHGTSTPANDVTETRAIKQALGN 328 (416)
T ss_dssp HHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHGG
T ss_pred HHHHHHHHHHHcCCCHhHCCEEEEECCCCcCcCHHHHHHHHHHHcc
Confidence 5788999999999999999999754 43321123333445666664
No 141
>1ufy_A Chorismate mutase; shikimate pathway, mutant, riken structur genomics/proteomics initiative, RSGI, structural genomics,; HET: MES; 0.96A {Thermus thermophilus} SCOP: d.79.1.2 PDB: 1ode_A* 1ui9_A*
Probab=60.31 E-value=14 Score=31.26 Aligned_cols=54 Identities=11% Similarity=0.230 Sum_probs=39.5
Q ss_pred HHHHHHHHHcCCCc-CCcCEEEeeccCC--CCCCcHHHHHHHHcCCCCCceeeEecCCCcc
Q 011007 168 SAMDSLLQKTGLKP-KDIDILIVNCSLF--SPTPSLSAMVINKYKLRSNIKSFNLSGMGCS 225 (496)
Q Consensus 168 ~Aa~~aL~~agi~p-~dID~LI~~ss~~--~~~Ps~a~~I~~~Lgl~~~~~~~dl~g~gCs 225 (496)
+-.++.+++.++++ +||--++|+.++| ...|..+.+ ++|+. +++-++...|.=-
T Consensus 25 eLl~~i~~~N~l~~~~divSv~FT~T~DL~a~FPA~aaR---~~g~~-~VpL~c~qE~~V~ 81 (122)
T 1ufy_A 25 ELLLKMLEANGIQSYEELAAVIFTVTEDLTSAFPAEAAR---QIGMH-RVPLLSAREVPVP 81 (122)
T ss_dssp HHHHHHHHHHTCCCGGGEEEEEEEECTTCCSCCHHHHHH---HTTGG-GSCEEEEECCCCT
T ss_pred HHHHHHHHhcCCCChHhEEEEEEEeCCccCccChHHHHH---HcCCC-ccchhhcccCCCC
Confidence 34456678899999 9999999987765 567766555 56987 7888877754433
No 142
>2ib8_A Acetyl-COA acetyltransferase; thiolase fold, potassium ION, chloride, beta-alpha-beta-ALPH alpha-beta-BETA topology; HET: MES; 1.85A {Homo sapiens} PDB: 2ib7_A* 2ib9_A* 2ibu_A* 2ibw_A* 2iby_A* 2f2s_A*
Probab=56.79 E-value=20 Score=36.16 Aligned_cols=50 Identities=24% Similarity=0.334 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCCceeeEecC
Q 011007 166 IFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSNIKSFNLSG 221 (496)
Q Consensus 166 a~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~~~~~dl~g 221 (496)
...|++++|+++|++|+|||.+-++ ......+-...+.||+.+ ..++++|
T Consensus 297 ~~~a~~~al~~Agl~~~dId~ie~~----D~f~~~~l~~~e~lg~~~--~~vn~~g 346 (395)
T 2ib8_A 297 PVYAASMVLKDVGLKKEDIAMWEVN----EAFSLVVLANIKMLEIDP--QKVNING 346 (395)
T ss_dssp HHHHHHHHHHHHTCCGGGEEEEEEC----CSBHHHHHHHHHHHTCCG--GGBSTTC
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEEc----cccHHHHHHHHHHcCCCc--cccCCCc
Confidence 4679999999999999999998744 112233334445588863 3455553
No 143
>2v4w_A Hydroxymethylglutaryl-COA synthase, mitochondrial; steroid biosynthesis, cholesterol biosynthesis, mitochondrion, phosphoprotein; HET: HMG; 1.7A {Homo sapiens} PDB: 2wya_A*
Probab=56.70 E-value=14 Score=38.62 Aligned_cols=49 Identities=6% Similarity=0.081 Sum_probs=31.9
Q ss_pred HHhHHHHHHHH-------HHHHHHH----cCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCC
Q 011007 159 RGEAELVIFSA-------MDSLLQK----TGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLR 211 (496)
Q Consensus 159 ~~ea~~la~~A-------a~~aL~~----agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~ 211 (496)
.+-+...+-.+ ++++|++ +|+.++|||.+|+.. +..-+...++++||++
T Consensus 211 ~~~av~~l~~~~~~y~~~~~~~l~~~~~~~gl~~~did~~v~Hq----an~rii~~~~~rL~~~ 270 (460)
T 2v4w_A 211 IQCYLRALDRCYTSYRKKIQNQWKQAGSDRPFTLDDLQYMIFHT----PFCKMVQKSLARLMFN 270 (460)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCGGGCSEEEECC----SSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCHHHhceEeecC----CchHHHHHHHHHcCCC
Confidence 33455555666 7888888 899999999999653 2223444455555544
No 144
>3oit_A OS07G0271500 protein; type III polyketide synthases, transferase; 2.00A {Oryza sativa} PDB: 3ale_A
Probab=55.26 E-value=16 Score=37.06 Aligned_cols=68 Identities=10% Similarity=0.079 Sum_probs=42.7
Q ss_pred HHHHHHHHHHHHHHHc----CCCcCCcC--EEEeeccCCCCCCcHHHHHHHHcCCCCCceee------EecCCCcchHHH
Q 011007 162 AELVIFSAMDSLLQKT----GLKPKDID--ILIVNCSLFSPTPSLSAMVINKYKLRSNIKSF------NLSGMGCSAGLI 229 (496)
Q Consensus 162 a~~la~~Aa~~aL~~a----gi~p~dID--~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~~~~~------dl~g~gCsg~l~ 229 (496)
+......+++++|+++ |++ ||| .+|.. ..-+.+-..++++||++++-... +.+|+++++...
T Consensus 268 ~~~~~~~~~~~~L~~~~~~~gl~--d~d~~~~v~H----q~n~~il~~v~~~Lgl~~ek~~~s~~~l~~~GNtssAsip~ 341 (387)
T 3oit_A 268 IGDNVERCLLDMFGPLLGGDGGG--GWNDLFWAVH----PGSSTIMDQVDAALGLEPGKLAASRRVLSDYGNMSGATVIF 341 (387)
T ss_dssp HHHHHHHHHHHHTGGGCC--------GGGSEEEEC----CCCHHHHHHHHHHHTCCTTTTHHHHHHHHHHCBCGGGHHHH
T ss_pred HHHHHHHHHHHHHHhhcccCCCC--cccccEEEEC----CCCHHHHHHHHHHcCCCHHHHHHHHHHHHHhCchHHhHHHH
Confidence 4555667888889998 887 555 44322 22345667899999998654433 357777888888
Q ss_pred HHHHHH
Q 011007 230 SIDLAR 235 (496)
Q Consensus 230 al~lA~ 235 (496)
+|+.+.
T Consensus 342 ~L~~~~ 347 (387)
T 3oit_A 342 ALDELR 347 (387)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 876653
No 145
>1tqy_B Actinorhodin polyketide putative beta-ketoacyl SY; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1
Probab=55.13 E-value=5.8 Score=40.52 Aligned_cols=45 Identities=13% Similarity=0.251 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEee-ccCCCCCCcHHHHHHHHcCC
Q 011007 166 IFSAMDSLLQKTGLKPKDIDILIVN-CSLFSPTPSLSAMVINKYKL 210 (496)
Q Consensus 166 a~~Aa~~aL~~agi~p~dID~LI~~-ss~~~~~Ps~a~~I~~~Lgl 210 (496)
...|++++|+++|++|+|||.+... |++..-.|.-+..+.+-+|-
T Consensus 281 ~~~ai~~al~~Agl~~~dId~ve~Hgtgt~~~D~~E~~al~~~~g~ 326 (415)
T 1tqy_B 281 LERAIRLALNDAGTGPEDVDVVFADGAGVPELDAAEARAIGRVFGR 326 (415)
T ss_dssp HHHHHHHHHHHHTCCGGGCCEEECCCCCSHHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHcCCCHhHCCEEEEeCCCCcCcCHHHHHHHHHHhCC
Confidence 4678999999999999999999755 44322223344556666664
No 146
>1afw_A 3-ketoacetyl-COA thiolase; fatty acid metabolism; 1.80A {Saccharomyces cerevisiae} SCOP: c.95.1.1 c.95.1.1 PDB: 1pxt_A
Probab=52.07 E-value=15 Score=37.13 Aligned_cols=48 Identities=27% Similarity=0.331 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEee-ccCCCCCCcHHHHHHHHcCCCCCceeeEec
Q 011007 166 IFSAMDSLLQKTGLKPKDIDILIVN-CSLFSPTPSLSAMVINKYKLRSNIKSFNLS 220 (496)
Q Consensus 166 a~~Aa~~aL~~agi~p~dID~LI~~-ss~~~~~Ps~a~~I~~~Lgl~~~~~~~dl~ 220 (496)
...|++++|+++|++|+|||.+=.+ |.+ + ......+.||+.+ ..++++
T Consensus 295 ~~~a~~~al~~Agl~~~dId~ve~h~~ft----~-~~l~~~~~lg~~~--~~vn~~ 343 (393)
T 1afw_A 295 PAYAIPKVLEATGLQVQDIDIFEINEAFA----A-QALYCIHKLGIDL--NKVNPR 343 (393)
T ss_dssp HHHHHHHHHHHHTCCGGGCSEEEECCSBH----H-HHHHHHHHHTCCG--GGBSTT
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEeccCH----H-HHHHHHHHhCCCC--cCcCCC
Confidence 4689999999999999999998654 221 1 2233456788853 344543
No 147
>2iwz_A 3-oxoacyl-[acyl-carrier-protein] synthase; mitochondria, mitochondrion, lipid synthesis, fatty acid SYN fatty acid biosynthesis; 1.65A {Homo sapiens} PDB: 2iwy_A 2c9h_A
Probab=51.95 E-value=8.1 Score=39.82 Aligned_cols=46 Identities=15% Similarity=0.226 Sum_probs=30.5
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEee-ccCCCCCCcHHHHHHHHcCC
Q 011007 165 VIFSAMDSLLQKTGLKPKDIDILIVN-CSLFSPTPSLSAMVINKYKL 210 (496)
Q Consensus 165 la~~Aa~~aL~~agi~p~dID~LI~~-ss~~~~~Ps~a~~I~~~Lgl 210 (496)
-...|++++|+++|++|+|||.+... |++..-.|.-...|.+.+|.
T Consensus 302 ~~~~ai~~Al~~Agl~p~dId~ve~HgtgT~~gD~~E~~al~~~fg~ 348 (438)
T 2iwz_A 302 GALRCMAAALKDAGVQPEEISYINAHATSTPLGDAAENKAIKHLFKD 348 (438)
T ss_dssp HHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHGG
T ss_pred HHHHHHHHHHHHcCCCHHHcCEEEecCCCCcccCHHHHHHHHHHHhc
Confidence 35788999999999999999998754 43321112233445555654
No 148
>1ox0_A Beta ketoacyl-acyl carrier protein synthase; transferase; 1.30A {Streptococcus pneumoniae} SCOP: c.95.1.1 c.95.1.1 PDB: 1oxh_A 2alm_A 2rjt_A
Probab=50.80 E-value=12 Score=38.48 Aligned_cols=74 Identities=9% Similarity=0.115 Sum_probs=43.7
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEee-ccCCCCCCcHHHHHHHHcCCCCCceee-----EecCCCcchHHHHHHHHHHHH
Q 011007 165 VIFSAMDSLLQKTGLKPKDIDILIVN-CSLFSPTPSLSAMVINKYKLRSNIKSF-----NLSGMGCSAGLISIDLARDLL 238 (496)
Q Consensus 165 la~~Aa~~aL~~agi~p~dID~LI~~-ss~~~~~Ps~a~~I~~~Lgl~~~~~~~-----dl~g~gCsg~l~al~lA~~lL 238 (496)
-...+++++|+++|++|+|||.+... +.+..-.|.-...+.+.+|-+ + .+ .++....++|+..+-.+...|
T Consensus 297 ~~~~ai~~al~~Agl~~~dId~ve~Hgtgt~~~D~~E~~al~~~~g~~--~-~v~s~k~~~GH~~gAaG~~~~i~~~~~l 373 (430)
T 1ox0_A 297 GAIKAIKLALEEAEISPEQVAYVNAHGTSTPANEKGESGAIVAVLGKE--V-PVSSTKSFTGHLLGAAGAVEAIVTIEAM 373 (430)
T ss_dssp HHHHHHHHHHHHHTCCGGGCCCEECCCCSCHHHHHHHHHHHHHHHCSS--S-EEECTHHHHCBCGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCcCHHHcCEEEEeCCcCcccCHHHHHHHHHHhCCC--c-eecccccccccchhhHHHHHHHHHHHHH
Confidence 35678999999999999999999755 443222233344566677642 2 11 123344455555555444445
Q ss_pred hcC
Q 011007 239 QVH 241 (496)
Q Consensus 239 ~~~ 241 (496)
+.+
T Consensus 374 ~~~ 376 (430)
T 1ox0_A 374 RHN 376 (430)
T ss_dssp HHT
T ss_pred hcC
Confidence 543
No 149
>2qo3_A Eryaii erythromycin polyketide synthase modules 3; ketosynthase, acyltransferase, phosphopantetheine, transfera; 2.59A {Saccharopolyspora erythraea}
Probab=48.77 E-value=28 Score=39.51 Aligned_cols=76 Identities=16% Similarity=0.198 Sum_probs=49.5
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEee-ccCCCCCCcHHHHHHHHcCCCCC-ceeeEe-------cCCCcchHHHHHHHHH
Q 011007 165 VIFSAMDSLLQKTGLKPKDIDILIVN-CSLFSPTPSLSAMVINKYKLRSN-IKSFNL-------SGMGCSAGLISIDLAR 235 (496)
Q Consensus 165 la~~Aa~~aL~~agi~p~dID~LI~~-ss~~~~~Ps~a~~I~~~Lgl~~~-~~~~dl-------~g~gCsg~l~al~lA~ 235 (496)
-...+++++|+++|++|+|||.+... |.+..-.|.-+..+.+.+|...+ -....+ +....++|+.++..+.
T Consensus 287 ~~~~~i~~Al~~Agl~p~dId~ve~HgtgT~~gD~~E~~al~~~f~~~~~~~~~~~vgs~K~~iGH~~~AaG~~~lik~~ 366 (915)
T 2qo3_A 287 AQRRVIRQALESCGLEPGDVDAVEAHGTGTALGDPIEANALLDTYGRDRDADRPLWLGSVKSNIGHTQAAAGVTGLLKVV 366 (915)
T ss_dssp HHHHHHHHHHHHTTCCGGGCCEEECCCCCCTTTHHHHHHHHHHHTSSSCCTTSCEEEECTHHHHCBCGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHCcEEEecCCCCccCCHHHHHHHHHHhccccCCCCcccccCcccceeCCccccchHHHHHHH
Confidence 45778999999999999999999755 55544456667778888886321 122333 3333455565555555
Q ss_pred HHHhc
Q 011007 236 DLLQV 240 (496)
Q Consensus 236 ~lL~~ 240 (496)
..|+.
T Consensus 367 l~L~~ 371 (915)
T 2qo3_A 367 LALRN 371 (915)
T ss_dssp HHHHH
T ss_pred HHHhc
Confidence 55554
No 150
>3o04_A LMO2201 protein, beta-keto-acyl carrier protein synthase II; csgid, structural genomics; 1.85A {Listeria monocytogenes}
Probab=48.62 E-value=6.3 Score=40.21 Aligned_cols=46 Identities=15% Similarity=0.152 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEee-ccCCCCCCcHHHHHHHHcCC
Q 011007 165 VIFSAMDSLLQKTGLKPKDIDILIVN-CSLFSPTPSLSAMVINKYKL 210 (496)
Q Consensus 165 la~~Aa~~aL~~agi~p~dID~LI~~-ss~~~~~Ps~a~~I~~~Lgl 210 (496)
-...|++++|+++|++|+|||.+... |++..-.+.-+..+.+.+|.
T Consensus 278 ~~~~a~~~al~~agl~~~dId~ve~HgtgT~~~d~~e~~al~~~~~~ 324 (413)
T 3o04_A 278 GAARAMKMAIDDAGLTPDKVDYINAHGTSTPYNDEYETQAIKTVFGE 324 (413)
T ss_dssp HHHHHHHHHHHHHTCCGGGCCEEECCCCCCHHHHHHHHHHHHHHHGG
T ss_pred HHHHHHHHHHHHcCCCHHHcCEEEEeCCcCcccCHHHHHHHHHHhcc
Confidence 35689999999999999999998754 44322223333445555553
No 151
>2f82_A HMG-COA synthase; HMGS1, transferase; 2.10A {Brassica juncea} PDB: 2f9a_A* 2fa0_A* 2fa3_A*
Probab=48.22 E-value=31 Score=35.58 Aligned_cols=42 Identities=12% Similarity=0.157 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHH------HcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcC
Q 011007 164 LVIFSAMDSLLQ------KTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYK 209 (496)
Q Consensus 164 ~la~~Aa~~aL~------~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lg 209 (496)
...-.+.+++|+ ++|++++|||.+++... ...+-..+.++||
T Consensus 214 ~~l~~~~~~~l~~~~~~~~agl~~~did~~v~Hq~----~~~i~~~~~~~L~ 261 (450)
T 2f82_A 214 MALDSCYKHLCNKFEKLEGKEFSINDADYFVFHSP----YNKLVQKSFARLL 261 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHSSCCCGGGCSEEEECCS----SHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhccccCCChhhcCEEEecCC----hHHHHHHHHHHhc
Confidence 344567777775 88999999999886532 2233344555665
No 152
>2ix4_A 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ketoacyl-(acyl carrier protein) synthase, lipid metabol condensing enzyme; 1.95A {Arabidopsis thaliana} SCOP: c.95.1.1 c.95.1.1 PDB: 1w0i_A
Probab=47.99 E-value=7.1 Score=40.14 Aligned_cols=45 Identities=20% Similarity=0.206 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEee-ccCCCCCCcHHHHHHHHcC
Q 011007 165 VIFSAMDSLLQKTGLKPKDIDILIVN-CSLFSPTPSLSAMVINKYK 209 (496)
Q Consensus 165 la~~Aa~~aL~~agi~p~dID~LI~~-ss~~~~~Ps~a~~I~~~Lg 209 (496)
-...|++++|+++|++|+|||.+... |++..-.|.-...+...++
T Consensus 295 ~~~~ai~~al~~agl~~~dId~ve~HgtgT~~~D~~E~~al~~~~~ 340 (431)
T 2ix4_A 295 GAVLAMTRALRQSGLCPNQIDYVNAHATSTPIGDAVEARAIKTVFS 340 (431)
T ss_dssp HHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCCHHHcCEEEEeCCcCcccCHHHHHHHHHHHc
Confidence 35778999999999999999998754 4432112333344444444
No 153
>3v7i_A Putative polyketide synthase; type III polyketide synthase, acyltransferase, transferase,; 2.90A {Streptomyces coelicolor}
Probab=47.82 E-value=53 Score=33.55 Aligned_cols=78 Identities=18% Similarity=0.164 Sum_probs=50.7
Q ss_pred HHHHHHHHHHH------HcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcC--CCCCce-----eeEecCCCcchHHHHH
Q 011007 165 VIFSAMDSLLQ------KTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYK--LRSNIK-----SFNLSGMGCSAGLISI 231 (496)
Q Consensus 165 la~~Aa~~aL~------~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lg--l~~~~~-----~~dl~g~gCsg~l~al 231 (496)
-...+++++|+ ++|++ ||.+|.... .+.+-..++++|| ++++-. .++.+|+++++...+|
T Consensus 308 ~~~~~i~~~L~~~~~~~~~gl~---id~~v~Hq~----~~~il~~v~~~Lg~~l~~ek~~~s~~~l~~GNtssAsi~~~L 380 (413)
T 3v7i_A 308 ETVTAMWEWLRVRYEDDPSSWH---PDVLLAHPG----GTRVLEYMEQTMPDEWPSGLLSYSRDSYTSGNRGGAAVFDIL 380 (413)
T ss_dssp HHHHHHHHHHHHHTSSSCTTCC---CCEEEEECS----SHHHHHHHHHHSCSSCCSCSTHHHHHHHTTCBCGGGHHHHHH
T ss_pred HHHHHHHHHHhhccccccCCCc---eeEEEECCC----ChHHHHHHHHHhCCCCCHHHhhccceEeceeChHHHHHHHHH
Confidence 36788999999 88887 998775432 2456678999999 986532 3344566666666666
Q ss_pred HHHHHHHhcCCCCEEEEEE
Q 011007 232 DLARDLLQVHPNSNAVVVS 250 (496)
Q Consensus 232 ~lA~~lL~~~~~~~aLVVs 250 (496)
+-+.+ =+..+++++|+++
T Consensus 381 ~~~~~-~~~~~Gd~vll~~ 398 (413)
T 3v7i_A 381 RRAHD-AGQKTGSRAVLYA 398 (413)
T ss_dssp HHHHH-HCCCTTCEEEEEE
T ss_pred HHHHh-CCCCCCCEEEEEE
Confidence 65541 0112456666655
No 154
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=47.63 E-value=21 Score=35.20 Aligned_cols=33 Identities=15% Similarity=0.217 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEeeccCC
Q 011007 162 AELVIFSAMDSLLQKTGLKPKDIDILIVNCSLF 194 (496)
Q Consensus 162 a~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~ 194 (496)
-.+....+++++|+++|++++|||.|.++..|.
T Consensus 47 h~~~l~~~i~~~L~~agi~~~did~Ia~~~GPG 79 (330)
T 2ivn_A 47 HARLMKPLLRKALSEAGVSLDDIDVIAFSQGPG 79 (330)
T ss_dssp HHHHHHHHHHHHHHHHTCCTTTCCEEEEEEESS
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCcEEEEECCCC
Confidence 344567899999999999999999998877664
No 155
>2gp6_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiolase fold, structural genomics, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis}
Probab=46.59 E-value=13 Score=38.19 Aligned_cols=26 Identities=31% Similarity=0.354 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEee
Q 011007 165 VIFSAMDSLLQKTGLKPKDIDILIVN 190 (496)
Q Consensus 165 la~~Aa~~aL~~agi~p~dID~LI~~ 190 (496)
-...+++++|+++|++|+|||.+...
T Consensus 303 ~~~~ai~~al~~Agl~~~dId~ve~H 328 (434)
T 2gp6_A 303 RAGHAITRAIQLAGLAPGDIDHVNAH 328 (434)
T ss_dssp HHHHHHHHHHHHTTCCTTTEEEEECC
T ss_pred HHHHHHHHHHHHcCCCHHHcCEEEEe
Confidence 35778999999999999999998866
No 156
>4ewg_A Beta-ketoacyl synthase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, transferase; 2.25A {Burkholderia phymatum}
Probab=45.59 E-value=7.2 Score=39.79 Aligned_cols=47 Identities=15% Similarity=0.068 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEee-ccCCCCCCcHHHHHHHHcCC
Q 011007 164 LVIFSAMDSLLQKTGLKPKDIDILIVN-CSLFSPTPSLSAMVINKYKL 210 (496)
Q Consensus 164 ~la~~Aa~~aL~~agi~p~dID~LI~~-ss~~~~~Ps~a~~I~~~Lgl 210 (496)
+-...|++++|+++|++|+|||.+... |++..-.|.-+..+.+.+|-
T Consensus 279 ~~~~~ai~~Al~~Agl~~~dId~ve~Hgtgt~~~D~~E~~al~~~~~~ 326 (412)
T 4ewg_A 279 STMARAMQLALEDAKLDANAIAYVNAHGTSTDRGDVAESQATARTFGE 326 (412)
T ss_dssp HHHHHHHHHHHHHTTCCGGGEEEEECCCCCCHHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEccCCCCccccHHHHHHHHHHcCC
Confidence 346789999999999999999999744 44322233445556666663
No 157
>3hhd_A Fatty acid synthase; transferase, multienzyme, megasynthase, fatty acid synthesis, acetylation, cytoplasm, fatty acid biosynthesis, hydrolase; 2.15A {Homo sapiens} PDB: 2jfk_A* 2jfd_A
Probab=40.87 E-value=27 Score=39.94 Aligned_cols=77 Identities=13% Similarity=0.084 Sum_probs=50.0
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEee-ccCCCCCCcHHHHHHHHcCCCCCcee------eEecCCCcchHHHHHHHHHHH
Q 011007 165 VIFSAMDSLLQKTGLKPKDIDILIVN-CSLFSPTPSLSAMVINKYKLRSNIKS------FNLSGMGCSAGLISIDLARDL 237 (496)
Q Consensus 165 la~~Aa~~aL~~agi~p~dID~LI~~-ss~~~~~Ps~a~~I~~~Lgl~~~~~~------~dl~g~gCsg~l~al~lA~~l 237 (496)
-...+++++|+++|++|+|||.+... |++..-.|.-+..|.+-++-...-+. -+++....++|+.++-.+.-.
T Consensus 270 ~q~~~i~~Al~~Agl~p~dIdyvEaHgTgT~~gD~~E~~Al~~~f~~~~~~~~~vgs~Ks~iGH~~~AaG~~~lik~~l~ 349 (965)
T 3hhd_A 270 IQEQLIRSLYQSAGVAPESFEYIEAHGTGTKVGDPQELNGITRALCATRQEPLLIGSTKSNMGHPEPASGLAALAKVLLS 349 (965)
T ss_dssp HHHHHHHHHHHHTTCCGGGEEEEECCCCCCTTHHHHHHHHHHHHHCSSCSSCEEEECTHHHHCBCGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHhccccccCCCCCCCCHHHHHHHHHHhcccCCCceeeeccccccccchhhhhHHHHHHHHHH
Confidence 35688999999999999999998744 55544456666777777764322111 123444556666666666666
Q ss_pred HhcC
Q 011007 238 LQVH 241 (496)
Q Consensus 238 L~~~ 241 (496)
|+.+
T Consensus 350 l~~~ 353 (965)
T 3hhd_A 350 LEHG 353 (965)
T ss_dssp HHHT
T ss_pred HhcC
Confidence 6544
No 158
>2p8u_A Hydroxymethylglutaryl-COA synthase, cytoplasmic; hydromethylglutaryl COA, mevalonate pathway, structural GENO structural genomics consortium, SGC; HET: COA; 2.00A {Homo sapiens}
Probab=39.62 E-value=33 Score=35.80 Aligned_cols=44 Identities=14% Similarity=0.160 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHHHH--------HcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcC
Q 011007 162 AELVIFSAMDSLLQ--------KTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYK 209 (496)
Q Consensus 162 a~~la~~Aa~~aL~--------~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lg 209 (496)
+.+-+....++.++ ++|+.++|||.+++.. +.+.+-..+..+||
T Consensus 236 a~~~~~~~~~~~l~~~~~~~~~~~g~~~~did~~v~H~----~~~ki~~~~~~~L~ 287 (478)
T 2p8u_A 236 ALDRCYSVYCKKIHAQWQKEGNDKDFTLNDFGFMIFHS----PYCKLVQKSLARML 287 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCCCCCGGGCSEEEECC----SSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhccccccccCCChHHcCEEEecC----CcHHHHHHHHHHhC
Confidence 44455566777776 7799999999988653 22344455666666
No 159
>2hg4_A DEBS, 6-deoxyerythronolide B synthase; ketosynthase, acyltransferase, module 5, transferase; 2.73A {Saccharopolyspora erythraea}
Probab=34.71 E-value=30 Score=39.24 Aligned_cols=76 Identities=13% Similarity=0.160 Sum_probs=46.0
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEee-ccCCCCCCcHHHHHHHHcCCCCC-ceeeE-------ecCCCcchHHHHHHHHH
Q 011007 165 VIFSAMDSLLQKTGLKPKDIDILIVN-CSLFSPTPSLSAMVINKYKLRSN-IKSFN-------LSGMGCSAGLISIDLAR 235 (496)
Q Consensus 165 la~~Aa~~aL~~agi~p~dID~LI~~-ss~~~~~Ps~a~~I~~~Lgl~~~-~~~~d-------l~g~gCsg~l~al~lA~ 235 (496)
-...+++++|+++|++|+|||.+... |.+..-.|.-...+.+.+|.... -.... ++....++|+.++..+.
T Consensus 309 ~q~~ai~~Al~~Agl~p~dId~veaHgtgT~~gD~~E~~al~~~fg~~~~~~~~~~vgs~K~~iGH~~~AaG~~~lik~v 388 (917)
T 2hg4_A 309 AQQRVIRRALENAGVRAGDVDYVEAHGTGTRLGDPIEVHALLSTYGAERDPDDPLWIGSVKSNIGHTQAAAGVAGVMKAV 388 (917)
T ss_dssp HHHHHHHHHHHHHTCCGGGCCEEECCCCCCTTHHHHHHHHHHTTTTTSSCTTSCCEEECTHHHHCBCGGGTTHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEeeccCCCccCcHHHHHHHHHHhccccCCCCceeccCcccceecchhhhHHHHHHHHH
Confidence 45678999999999999999998754 44433334555566777775211 11222 33334455555555555
Q ss_pred HHHhc
Q 011007 236 DLLQV 240 (496)
Q Consensus 236 ~lL~~ 240 (496)
..|+.
T Consensus 389 l~L~~ 393 (917)
T 2hg4_A 389 LALRH 393 (917)
T ss_dssp HHHHH
T ss_pred HHHhc
Confidence 55554
No 160
>2wge_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta ketoacyl synthase I thiolactomycin, cytoplasm, transferase, acyltransferase; HET: TLM; 1.80A {Mycobacterium tuberculosis} PDB: 2wgd_A* 2wgg_A* 2wgf_A*
Probab=33.04 E-value=24 Score=35.97 Aligned_cols=29 Identities=31% Similarity=0.336 Sum_probs=24.1
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEee-ccC
Q 011007 165 VIFSAMDSLLQKTGLKPKDIDILIVN-CSL 193 (496)
Q Consensus 165 la~~Aa~~aL~~agi~p~dID~LI~~-ss~ 193 (496)
-...|++++|+++|++|+|||.+... |++
T Consensus 286 ~~~~ai~~al~~agl~~~dId~ve~HgtgT 315 (416)
T 2wge_A 286 RAGRAMTRSLELAGLSPADIDHVNAHGTAT 315 (416)
T ss_dssp HHHHHHHHHHHHHTCCGGGCCEEECCCCCC
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEECCCCC
Confidence 35778999999999999999999755 443
No 161
>2dt5_A AT-rich DNA-binding protein; REX, NADH, NAD, rossmann fold, redox sensing, winged helix, themophilus; HET: NAD; 2.16A {Thermus thermophilus} SCOP: a.4.5.38 c.2.1.12 PDB: 1xcb_A* 3ikt_A* 3ikv_A 3il2_A*
Probab=31.82 E-value=20 Score=33.18 Aligned_cols=59 Identities=19% Similarity=0.278 Sum_probs=44.4
Q ss_pred HHHHHHHcCCChhhHhhhhhhhcccCCccCCchHHHHHHHHHh----CCCCCCCEEEEEeech-hHh
Q 011007 398 IDELQKNLQLSAEHVEASRMTLHRFGNTSSSSLWYEMSYIEEK----GRMKKGDRVWQIAFGS-GFK 459 (496)
Q Consensus 398 ~~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~----g~i~~Gd~Vll~~fG~-G~~ 459 (496)
-+++++.+|+++.++ +..+.-||..|..-.-|...++.+. -.....-+|+++|.|. |-.
T Consensus 31 s~~l~~~~~~~~~~i---Rkdls~~g~~G~~g~gY~v~~L~~~~~~~lg~~~~~rV~IIGaG~~G~~ 94 (211)
T 2dt5_A 31 SEQLGGLAQVTAFQV---RKDLSYFGSYGTRGVGYTVPVLKRELRHILGLNRKWGLCIVGMGRLGSA 94 (211)
T ss_dssp HHHHHHHHTSCHHHH---HHHHHHTTCCCCTTTCEEHHHHHHHHHHHHTTTSCEEEEEECCSHHHHH
T ss_pred HHHHHHHhCCCHHHe---echHHHHHHhcCCceeEEhHHHHHHHHHHhCcCCCCEEEEECccHHHHH
Confidence 468899999999999 7889999999998887777554432 1234456899999984 433
No 162
>3ven_A O-carbamoyltransferase TOBZ; antibiotic biosynthesis, substrate assisted catalysis, subst channeling, adenylation; HET: TLA; 1.57A {Streptoalloteichus tenebrarius} PDB: 3veo_A 3ves_A* 3vet_A* 3vew_A* 3ver_A* 3vf4_A* 3vf2_A* 3vex_A* 3vez_A*
Probab=31.74 E-value=23 Score=37.96 Aligned_cols=26 Identities=23% Similarity=0.323 Sum_probs=22.6
Q ss_pred HHHHHHHHHHcCCCcCCcCEEEeecc
Q 011007 167 FSAMDSLLQKTGLKPKDIDILIVNCS 192 (496)
Q Consensus 167 ~~Aa~~aL~~agi~p~dID~LI~~ss 192 (496)
..|++.||+++|++++|||.|.++..
T Consensus 53 ~~AI~~cL~~AGi~~~DID~Va~~~~ 78 (576)
T 3ven_A 53 VQAAAFCLAQAGLTVDDLDAVAFGWD 78 (576)
T ss_dssp HHHHHHHHHHHTCCGGGCSEEEESSC
T ss_pred HHHHHHHHHHcCCCHHHCcEEEEECC
Confidence 46789999999999999999987644
No 163
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=27.35 E-value=18 Score=33.71 Aligned_cols=59 Identities=19% Similarity=0.310 Sum_probs=38.2
Q ss_pred HHHHHHHcCCChhhHhhhhhhhcccCCccCCchHHHHHHHHHh-C---CCCCCCEEEEEeech-hHh
Q 011007 398 IDELQKNLQLSAEHVEASRMTLHRFGNTSSSSLWYEMSYIEEK-G---RMKKGDRVWQIAFGS-GFK 459 (496)
Q Consensus 398 ~~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSaSi~~~La~~~~~-g---~i~~Gd~Vll~~fG~-G~~ 459 (496)
-+++++.+|+++.++ |..+.-||..|..-.-|...++.+. + .....-+|+++|.|. |-.
T Consensus 36 s~~l~~~~~~~~~~i---Rkdls~fg~~G~~g~gY~v~~L~~~~~~~lg~~~~~rV~IIGAG~~G~~ 99 (215)
T 2vt3_A 36 SAELSDAVKVDSATI---RRDFSYFGALGKKGYGYNVDYLLSFFRKTLDQDEMTDVILIGVGNLGTA 99 (215)
T ss_dssp HHHHHHHHCCCHHHH---HHHHHHTTCCC-----EEHHHHHHHHHHHHHHC---CEEEECCSHHHHH
T ss_pred HHHHHHHhCCCHHHe---echHHHHHHhcCCcceEEhHHHHHHHHHHhCcCCCCEEEEEccCHHHHH
Confidence 468899999999999 7899999999999888777554432 0 123345799999984 443
No 164
>3qbx_A Anhydro-N-acetylmuramic acid kinase; acetate and sugar kinases, HSP70, actin superfamily, anhydro-N-actetylmuramic acid binding; HET: AH0; 2.10A {Pseudomonas aeruginosa} PDB: 3qbw_A*
Probab=26.92 E-value=54 Score=33.13 Aligned_cols=57 Identities=9% Similarity=0.124 Sum_probs=39.5
Q ss_pred hHHHHHhHHHHHHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCC--------cHHHHHHHHcCCC
Q 011007 155 MEAARGEAELVIFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTP--------SLSAMVINKYKLR 211 (496)
Q Consensus 155 ~~~~~~ea~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~P--------s~a~~I~~~Lgl~ 211 (496)
+.+...+-.++-.+|++++++++++++++||+|=....+-+..| ...+.|+.+.|++
T Consensus 59 ~~~l~~~lg~~~a~av~~~l~~~~~~~~~Id~IGsHGQTv~H~P~~~~TlQiGd~~~iA~~Tgi~ 123 (371)
T 3qbx_A 59 AAEVEQRWVALAAQGVRELLLQQQMSPDEVRAIGSHGQTIRHEPARHFTVQIGNPALLAELTGID 123 (371)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEEECCEEEEEEGGGTEEEEECCHHHHHHHHSSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCcccccEEEeCCccCccCCCCCCeeecCCHHHHHHHHCcC
Confidence 33444556677789999999999999999998744322212222 4467788888875
No 165
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=23.71 E-value=1.4e+02 Score=29.66 Aligned_cols=56 Identities=23% Similarity=0.254 Sum_probs=42.9
Q ss_pred hHHHHHhHHHHHHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCC
Q 011007 155 MEAARGEAELVIFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLR 211 (496)
Q Consensus 155 ~~~~~~ea~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~ 211 (496)
+++..+...+=....++++|+++++++++||.|+++.. ....|.+...+.+.+|.+
T Consensus 316 ~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG-~s~~p~v~~~l~~~f~~~ 371 (409)
T 4gni_A 316 YETIARTVFEGFNRLVESAVKKAGLDPLDVDEVIMSGG-TSNTPRIAANFRYIFPES 371 (409)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHTTCCGGGCCEEEEESG-GGGCHHHHHHHHHHSCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECC-ccccHHHHHHHHHHcCCc
Confidence 44444445555778889999999999999999886632 234789999999999875
No 166
>3qvl_A Putative hydantoin racemase; isomerase; HET: 5HY; 1.82A {Klebsiella pneumoniae subsp} PDB: 3qvk_A* 3qvj_A
Probab=20.41 E-value=2.1e+02 Score=26.72 Aligned_cols=62 Identities=6% Similarity=0.094 Sum_probs=43.8
Q ss_pred hHHHHHHHHHHHHHHHcCCCcCCcCEEEeeccCCCCCCcHHHHHHHHcCCCCCceeeEecCCCcchHHHHHHHHHHHHhc
Q 011007 161 EAELVIFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLLQV 240 (496)
Q Consensus 161 ea~~la~~Aa~~aL~~agi~p~dID~LI~~ss~~~~~Ps~a~~I~~~Lgl~~~~~~~dl~g~gCsg~l~al~lA~~lL~~ 240 (496)
+..+...+++++++++ +++|.||.+|+. .|.+...|++.+|. +.+|= ...+...+..+++.
T Consensus 157 ~~~~~l~~~~~~~~~~-----~gad~IVLGCTh---~p~l~~~i~~~~gV----pvID~-------~~a~~~~~~~l~~~ 217 (245)
T 3qvl_A 157 LAQEKVRERCIRALKE-----DGSGAIVLGSGG---MATLAQQLTRELRV----PVIDG-------VSAAVKMVESLVAL 217 (245)
T ss_dssp HHHHHHHHHHHHHHHH-----SCCSEEEECCGG---GGGGHHHHHHHHTS----CEECH-------HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHh-----cCCCEEEECCCC---hHHHHHHHHHHcCC----eEEcc-------HHHHHHHHHHHHhC
Confidence 3556667777777765 358999999974 46778889998884 34443 34567778888887
Q ss_pred C
Q 011007 241 H 241 (496)
Q Consensus 241 ~ 241 (496)
+
T Consensus 218 g 218 (245)
T 3qvl_A 218 G 218 (245)
T ss_dssp T
T ss_pred C
Confidence 6
Done!