Citrus Sinensis ID: 011007

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490------
MPQTLPDFSNSVKLKYVKLGYQYLVNHILYLLLVPIMVAILIEVLRLGPDEILNLWKSLHFDLVQILCSSFLIIFIATVYFMSKPRHVYLVDYACYKPPVTCRVPFATFMEHSRLILKNNPKSVEFQMRILERSGLGEETCLPPAIHYIPPTPTMEAARGEAELVIFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLLQVHPNSNAVVVSTEIITPNYYQGNERAMLLPNCLFRMGGAAILLSNRRRNRSRAKYRLVHVVRTHKGADDKAYRCVFEEEDKEGKVGISLSKDLMAIAGEALKSNITTIGPLVLPASEQLLFLMTLIGRKIFNPKWKPYIPDFKQAFEHFCIHAGGRAVIDELQKNLQLSAEHVEASRMTLHRFGNTSSSSLWYEMSYIEEKGRMKKGDRVWQIAFGSGFKCNSAVWKCNKTIKTTTDNPWSDCIDRYPVHIPEIVKL
ccccccccccccccccEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHccccCEEEEEEECccccccccccHHHHHHHHHHcccccccHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccccccEEEEEcccccccccHHHHHHHHccccccccEEECccccccHHHHHHHHHHHHHHHcccccEEEEEEEEccccccccccccHHHHHHHcccccEEEEEEcccccccccccccccEEEEccccccccccHHcEEECccccEEEEEcccHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHcccccccccccHHHcccEEEEccccHHHHHHHHHHccccHHHHHHHHHHHHHccccccccHHHHHHHHHHccccccccEEEEEEEcccccCEEEEEEECcccccccccccccccccccccccccccc
**QTLPDFSNSVKLKYVKLGYQYLVNHILYLLLVPIMVAILIEVLRLGPDEILNLWKSLHFDLVQILCSSFLIIFIATVYFMSKPRHVYLVDYACYKPPVTCRVPFATFMEHSRLILKNNPKSVEFQMRILERSGLGEETCLPPAIHYIPPTPTMEAARGEAELVIFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLLQVHPNSNAVVVSTEIITPNYYQGNERAMLLPNCLFRMGGAAILLSNRRRNRSRAKYRLVHVVRTHKGADDKAYRCVFEEEDKEGKVGISLSKDLMAIAGEALKSNITTIGPLVLPASEQLLFLMTLIGRKIFNPKWKPYIPDFKQAFEHFCIHAGGRAVIDELQKNLQLSAEHVEASRMTLHRFGNTSSSSLWYEMSYIEEKGRMKKGDRVWQIAFGSGFKCNSAVWKCNKTIKTTTDNPWSDCIDRYPVHIPEIVKL
xxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
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MPQTLPDFSNSVKLKYVKLGYQYLVNHILYLLLVPIMVAILIEVLRLGPDEILNLWKSLHFDLVQILCSSFLIIFIATVYFMSKPRHVYLVDYACYKPPVTCRVPFATFMEHSRLILKNNPKSVEFQMRILERSGLGEETCLPPAIHYIPPTPTMEAARGEAELVIFSAMDSLLQKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLLQVHPNSNAVVVSTEIITPNYYQGNERAMLLPNCLFRMGGAAILLSNRRRNRSRAKYRLVHVVRTHKGADDKAYRCVFEEEDKEGKVGISLSKDLMAIAGEALKSNITTIGPLVLPASEQLLFLMTLIGRKIFNPKWKPYIPDFKQAFEHFCIHAGGRAVIDELQKNLQLSAEHVEASRMTLHRFGNTSSSSLWYEMSYIEEKGRMKKGDRVWQIAFGSGFKCNSAVWKCNKTIKTTTDNPWSDCIDRYPVHIPEIVKL

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
3-ketoacyl-CoA synthase 6 Contributes to cuticular wax and suberin biosynthesis. Involved in both decarbonylation and acyl-reduction wax synthesis pathways. Required for elongation of C24 fatty acids, an essential step of the cuticular wax production.confidentQ9XF43
3-ketoacyl-CoA synthase 5 Mediates mostly the synthesis of VLCFAs from 26 to 30 carbons in length (e.g. C20:1, C26, C28, C30).probableQ9C6L5

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
2.-.-.-Transferases.probable
2.3.-.-Acyltransferases.probable
2.3.1.-Transferring groups other than amino-acyl groups.probable
2.3.1.119Icosanoyl-CoA synthase.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1U0M, chain A
Confidence level:very confident
Coverage over the Query: 88-341,365-470
View the alignment between query and template
View the model in PyMOL
Template: 2H84, chain A
Confidence level:very confident
Coverage over the Query: 86-344,367-468
View the alignment between query and template
View the model in PyMOL
Template: 1TEE, chain A
Confidence level:probable
Coverage over the Query: 180-297,311-364,377-457
View the alignment between query and template
View the model in PyMOL