RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= 011008
(496 letters)
>2ogh_A Eukaryotic translation initiation factor EIF-1; alpha-beta protein;
NMR {Saccharomyces cerevisiae}
Length = 108
Score = 76.4 bits (188), Expect = 3e-17
Identities = 23/88 (26%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Query: 402 KGALKTIQIVTERRQGNKKMTKLSGLETFLMDPEALASELQKKFACSTTVAELPGKKGQE 461
I I ++R G K +T + G+ D + + L+K FAC+ + + P + G+
Sbjct: 20 TATSNYIHIRIQQRNGRKTLTTVQGVPEEY-DLKRILKVLKKDFACNGNIVKDP-EMGEI 77
Query: 462 VLIQGGVIADVAKHLVEQFGIPKRYIEV 489
+ +QG A V + ++ Q G+ K+ I++
Sbjct: 78 IQLQGDQRAKVCEFMISQLGLQKKNIKI 105
>3r90_A Malignant T cell-amplified sequence 1; structural genomics
consortium, surface entropy reduction, S binding
protein; 1.70A {Homo sapiens}
Length = 188
Score = 68.1 bits (166), Expect = 1e-13
Identities = 17/65 (26%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
Query: 1 MFPGISIPADGLPSFLSGEPWAVKVPGNPAPIAVGSTTMSSTEALKAGLRGKALRITHYY 60
M PG++ P L A+ G + VG MS+ + ++ +G + HY
Sbjct: 112 MCPGLTSPGAKLYPAAVDTIVAIMAAGAAHALCVGVMKMSAED-IEKVNKGIGIENIHYL 170
Query: 61 RDLLW 65
D LW
Sbjct: 171 NDGLW 175
>2if1_A EIF1, SUI1; translation initiation factor; NMR {Homo sapiens} SCOP:
d.64.1.1
Length = 126
Score = 65.4 bits (159), Expect = 4e-13
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 2/93 (2%)
Query: 397 QSVVRKGALKTIQIVTERRQGNKKMTKLSGLETFLMDPEALASELQKKFACSTTVAELPG 456
++ G I I ++R G K +T + G+ D + L +KKFAC+ TV E P
Sbjct: 33 DDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDY-DKKKLVKAFKKKFACNGTVIEHP- 90
Query: 457 KKGQEVLIQGGVIADVAKHLVEQFGIPKRYIEV 489
+ G+ + +QG ++ + LVE ++V
Sbjct: 91 EYGEVIQLQGDQRKNICQFLVEIGLAKDDQLKV 123
>2cx0_A Hypothetical protein APE0525; PUA domain, structural genomics,
NPPSFA, national project on structural and functional
analyses; 1.80A {Aeropyrum pernix} SCOP: b.122.1.1
d.17.6.4 PDB: 2cx1_A* 1zs7_A
Length = 187
Score = 64.1 bits (156), Expect = 4e-12
Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 6/68 (8%)
Query: 1 MFPGISIPADGLPSFLSGEPWAVKVPGNPAPIAVGSTTMSSTEALK---AGLRGKALRIT 57
M PG+ + +G SF G+ A P+ VG + S+ K RG+A+R
Sbjct: 112 MIPGV-VGVEG--SFTRGDVVAALYHETRTPVMVGVAEVDSSALEKLYREKARGRAVRRV 168
Query: 58 HYYRDLLW 65
H D LW
Sbjct: 169 HRLGDALW 176
>3d79_A PUA domain, putative uncharacterized protein PH0734; unknown
function; 1.73A {Pyrococcus horikoshii}
Length = 179
Score = 63.3 bits (154), Expect = 6e-12
Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 4/65 (6%)
Query: 1 MFPGISIPADGLPSFLSGEPWAVKVPGNPAPIAVGSTTMSSTEALKAGLRGKALRITHYY 60
M PGI + AD G+ V P+A+G MS +K RGKA+++ H+
Sbjct: 114 MAPGI-VDAD--EGIKEGDFVFVVEEKYGRPLAIGIALMSGKV-MKEKNRGKAVKVIHHA 169
Query: 61 RDLLW 65
RD +W
Sbjct: 170 RDKIW 174
>2xzm_F EIF1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB:
2xzn_F
Length = 101
Score = 60.7 bits (147), Expect = 8e-12
Identities = 18/82 (21%), Positives = 35/82 (42%), Gaps = 2/82 (2%)
Query: 408 IQIVTERRQGNKKMTKLSGLETFLMDPEALASELQKKFACSTTVAELPGKKGQEVLIQGG 467
I I E+R+G K T + G+ D E + +K +C+ T+ E + + + + G
Sbjct: 19 IHIRVEQRRGRKCFTTVEGIPP-EFDYEKIMKYWKKWLSCNATIVEED-EGKKVIKLNGD 76
Query: 468 VIADVAKHLVEQFGIPKRYIEV 489
+ + L E+ I +
Sbjct: 77 HRNQIQQFLSEEGIAAVDNITI 98
>1q7h_A Conserved hypothetical protein; structural genomics, MCSG, PSI, PR
structure initiative; 2.10A {Thermoplasma acidophilum
dsm 1728} SCOP: b.122.1.1 d.17.6.2
Length = 153
Score = 54.0 bits (130), Expect = 6e-09
Identities = 22/65 (33%), Positives = 27/65 (41%), Gaps = 5/65 (7%)
Query: 1 MFPGISIPADGLPSFLSGEPWAVKVPGNPAPIAVGSTTMSSTEALKAGLRGKALRITHYY 60
PGI + D S G+ V IAVG M + E + RGKA RI H+
Sbjct: 90 FAPGI-VSMD--DSIRKGDMIFV-KSSKGYFIAVGMAEMDAGEVMATK-RGKAARIIHFP 144
Query: 61 RDLLW 65
D L
Sbjct: 145 GDELI 149
>1d1r_A Hypothetical 11.4 KD protein YCIH in PYRF-OSMB intergenic region;
alpha-beta plait, open-faced beta sandwich,
ferredoxin-like fold; NMR {Escherichia coli} SCOP:
d.64.1.1
Length = 116
Score = 50.2 bits (120), Expect = 6e-08
Identities = 26/103 (25%), Positives = 40/103 (38%), Gaps = 17/103 (16%)
Query: 380 STFVNRM---QAHHVVSRGSQSVVRKGALKTIQIVTERRQGNKKMTKLSGLETFLMDPEA 436
ST R+ +A V +G V IQ T R K + ++G++ +
Sbjct: 11 STETGRIDEPKAAPVRPKGDGVVR-------IQRQTSGR-KGKGVCLITGVDLDDAELTK 62
Query: 437 LASELQKKFACSTTVAELPGKKGQEVLIQGGVIADVAKHLVEQ 479
LA+EL+KK C V K + IQG + L +
Sbjct: 63 LAAELKKKCGCGGAV------KDGVIEIQGDKRDLLKSLLEAK 99
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 49.3 bits (117), Expect = 3e-06
Identities = 43/286 (15%), Positives = 98/286 (34%), Gaps = 90/286 (31%)
Query: 214 GITLDIKKSSH--KKLTKWLQA----KSSAG--LISVKEDKYKKESMLFSVNRGHP---D 262
G+ +D+ K+S + + W +A K + G ++ + + ++ F +G +
Sbjct: 1630 GMGMDLYKTSKAAQDV--WNRADNHFKDTYGFSILDIVINNPVNLTIHFGGEKGKRIREN 1687
Query: 263 YLSFKPE-----KRPAEKASQAVDHAASDNI--------------QPAKILEVTEV---- 299
Y + E K EK + ++ ++ QPA + + E
Sbjct: 1688 YSAMIFETIVDGKLKTEKIFKEINEHSTSYTFRSEKGLLSATQFTQPA-LT-LMEKAAFE 1745
Query: 300 ------YKPSVHVNPIFA--SVG------ADTGRLYTFSEACDVVF---NYIEKENLVKP 342
P+ + FA S+G + + + +VVF ++
Sbjct: 1746 DLKSKGLIPA---DATFAGHSLGEYAALASLADVM-SIESLVEVVFYRGMTMQVAVPRDE 1801
Query: 343 TAKS---IVVLDP-----TLSDALFKGAIK---KGTTYPTEIHKKDLGSTFVNRMQAHHV 391
+S ++ ++P + S + ++ K T + EI VN ++V
Sbjct: 1802 LGRSNYGMIAINPGRVAASFSQEALQYVVERVGKRTGWLVEI---------VN----YNV 1848
Query: 392 VSRGSQSVV--RKGALKTI-QIVTERRQGNKKMTKLSGLETFLMDP 434
Q V AL T+ ++ + + +L ++ ++
Sbjct: 1849 --ENQQYVAAGDLRALDTVTNVLNFIKLQKIDIIELQ--KSLSLEE 1890
Score = 42.0 bits (98), Expect = 5e-04
Identities = 68/369 (18%), Positives = 112/369 (30%), Gaps = 136/369 (36%)
Query: 51 GKALRITHYY-RDLLWGSVEGHSVPNAGF-LEDVVVEDP---AFLSTSQVSDSCEGAADS 105
G L T +D+ W + H GF + D+V+ +P + +G
Sbjct: 1632 GMDLYKTSKAAQDV-WNRADNHFKDTYGFSILDIVINNPVNLTIHFGGE-----KGKRIR 1685
Query: 106 SNDQKNGEEGIIDADNANSE------PNSTSATQDDFDGNIVEQVAADVGDLKLTENVDA 159
N E I+D + +STS T F + G L T+
Sbjct: 1686 ENYSAMIFETIVDGKLKTEKIFKEINEHSTSYT---FRS--------EKGLLSATQF--- 1731
Query: 160 GETNEEHHVLTTEDVDAYLDKCLLQALHTTVKDKDLPMPGSTLWSNHILPCRPSGITLDI 219
T Q P TL
Sbjct: 1732 --T---------------------Q-------------PALTLME--------------- 1740
Query: 220 KKSSHKKLTKW--LQAKSS-AGLISVKEDKYKKESMLFSVNRGHPDYLSFKP-----EKR 271
K++ + L + A ++ AG S+ E Y + L S+ D +S + R
Sbjct: 1741 -KAAFEDLKSKGLIPADATFAGH-SLGE--Y---AALASLA----DVMSIESLVEVVFYR 1789
Query: 272 PAEKASQAV--DHAASDN-----IQPAKILEV--TEVYKPSVHVNPIFASVGADTGRLYT 322
AV D N I P ++ E + + VG TG L
Sbjct: 1790 -GMTMQVAVPRDELGRSNYGMIAINPGRVAASFSQEA------LQYVVERVGKRTGWL-- 1840
Query: 323 FSEACDVVFNY-IEKENLVKPTAKSIVVLDPTLSDALFKGAIKKGTTYPTEIHKKDLGST 381
++V NY +E + V A + LD T+++ L ++K I +L +
Sbjct: 1841 ----VEIV-NYNVENQQYV--AAGDLRALD-TVTNVLNFIKLQK-------IDIIELQKS 1885
Query: 382 F-VNRMQAH 389
+ ++ H
Sbjct: 1886 LSLEEVEGH 1894
Score = 37.7 bits (87), Expect = 0.010
Identities = 71/446 (15%), Positives = 135/446 (30%), Gaps = 144/446 (32%)
Query: 38 TMSSTEALKAGLRGKALR--ITHYYRDLLWGSVEGHSVPNAGFLEDVVVEDPAFLSTSQV 95
S E K G + L +T + L G+ + H++ A L++ D + T ++
Sbjct: 68 VSSLVEPSKVGQFDQVLNLCLTEFENCYLEGN-DIHALA-AKLLQE---NDTTLVKTKEL 122
Query: 96 SDSCEGAADSSN--DQKNGEEGIIDADNANSEPNSTSAT---QDDFDGNIVEQV------ 144
+ A + K + A A Q GN +
Sbjct: 123 IKNYITARIMAKRPFDKKSNSALFRA--VGEGNAQLVAIFGGQ----GNTDDYFEELRDL 176
Query: 145 ----AADVGDL------KLTENVDAGETNEEHHVLTTEDVDAYLDKCLLQALHTTVK--D 192
VGDL L+E + E+ T+ ++ +L+ L D
Sbjct: 177 YQTYHVLVGDLIKFSAETLSELIRTTLDAEKVF---TQGLN------ILEWLENPSNTPD 227
Query: 193 KD--------LPMPGSTLWSNHILPCRPSGITLDIKKSSHKKLTKWLQAKS--SAGLISV 242
KD P+ G +++++ + G T +L +L+ + S GL++
Sbjct: 228 KDYLLSIPISCPLIGVIQLAHYVVTAKLLGFT-------PGELRSYLKGATGHSQGLVTA 280
Query: 243 K--------EDKYK--KESM--LFSVN-RGHPDYLSFKPEKRPAEKASQAVDHAASDNIQ 289
E + ++++ LF + R + ++ P ++++
Sbjct: 281 VAIAETDSWESFFVSVRKAITVLFFIGVRCY---EAYPNTSLPPSILEDSLENNEG---- 333
Query: 290 PAKILEVTEVYKPSVHVNPIFASVGADTGRLYTFSEACDVVFNYIEKENLVKPTAKSIVV 349
PS P+ + + V +Y+ K N P K + +
Sbjct: 334 -----------VPS----PMLSISNLTQ----------EQVQDYVNKTNSHLPAGKQVEI 368
Query: 350 LDPTLSDALFKGAIKKGTTYPTEIHKKDLGSTFVNRMQAHHVVSRGS-QSVVR-KGALKT 407
+L GA + VVS G QS+ L+
Sbjct: 369 -------SLVNGA-------------------------KNLVVS-GPPQSLYGLNLTLRK 395
Query: 408 IQIVTERRQGNKKMT--KLSGLETFL 431
+ + Q + KL FL
Sbjct: 396 AKAPSGLDQSRIPFSERKLKFSNRFL 421
Score = 36.6 bits (84), Expect = 0.024
Identities = 66/449 (14%), Positives = 132/449 (29%), Gaps = 175/449 (38%)
Query: 34 VGSTTMSSTEALKAGLRGKALRITHYYR--DLL-WGSVEGHSVPNAGFLEDVVVEDPAF- 89
VG S E L +R + + ++L W + P+ +L + + P
Sbjct: 184 VGDLIKFSAETLSELIRTTLDAEKVFTQGLNILEWLE-NPSNTPDKDYLLSIPISCPLIG 242
Query: 90 ---------------LSTSQVSDSCEGAADSSNDQKNGEEGIIDADNANSEPNSTSATQD 134
+ ++ +GA S +G++ A + + + +
Sbjct: 243 VIQLAHYVVTAKLLGFTPGELRSYLKGATGHS-------QGLVTA-----VAIAETDSWE 290
Query: 135 DFDGNIVE------------QVAADVGDLK---LTENVDAGETNEEH--HV--LTTEDVD 175
F ++ + A L L ++++ E + LT E V
Sbjct: 291 SFFVSVRKAITVLFFIGVRCYEAYPNTSLPPSILEDSLENNEGVPSPMLSISNLTQEQVQ 350
Query: 176 AYLDKCLLQALHTTVKDKDLPMPGSTLW-------SNHILPCRPSG--ITLDIKKSSHKK 226
Y++K + LP G + N ++ SG +L
Sbjct: 351 DYVNKT----------NSHLP-AGKQVEISLVNGAKNLVV----SGPPQSL-------YG 388
Query: 227 LTKWLQ-AKSSAGLISVKEDKYKKESMLFS------VNRG-------HPDYLSFKPEKRP 272
L L+ AK+ +GL D+ + FS NR H L P
Sbjct: 389 LNLTLRKAKAPSGL-----DQSRIP---FSERKLKFSNRFLPVASPFHSHLL------VP 434
Query: 273 AEKASQAVDHAASDNIQ-PAKILEVTEVYKPSVHVNPIFASV-GADTGRLYTFSEACDVV 330
A + +N+ AK +++ P++ + G+D R+ + S
Sbjct: 435 A--SDLINKDLVKNNVSFNAKDIQI-----------PVYDTFDGSDL-RVLSGS------ 474
Query: 331 FNYIEKENLVKPTAKSIVVLDPTLSDALFKGAIKKGTTYPTEIH-KKDLGSTFVNRMQAH 389
+ + D + P + + + +A
Sbjct: 475 -------------------ISERIVDCI--------IRLP--VKWET------TTQFKAT 499
Query: 390 HVVSRGSQSVVRKGALKTIQIVTER-RQG 417
H++ G G + ++T R + G
Sbjct: 500 HILDFGP------GGASGLGVLTHRNKDG 522
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 48.3 bits (114), Expect = 5e-06
Identities = 64/527 (12%), Positives = 141/527 (26%), Gaps = 177/527 (33%)
Query: 56 ITHYYRDLLWGSVEGHSVPNAGFLEDVVVED-----PAFLSTSQVSDSCEGAADSS---- 106
+ Y+D+L F+++ +D + LS ++ S
Sbjct: 14 HQYQYKDIL-----SVFEDA--FVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLR 66
Query: 107 ------NDQKNG-EEGIIDADNAN---------SEPNSTSATQDDFDGNIVEQVAADVGD 150
+ Q+ ++ + + N +E S + +EQ D
Sbjct: 67 LFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMY----IEQRDRLYND 122
Query: 151 LKLTENVDAGETNEEHHVLTTEDVDAYLDKCLLQ-------ALH------------TTVK 191
+ +++V + L + LL+ +
Sbjct: 123 ---------NQVFAKYNVSRLQPYLK-LRQALLELRPAKNVLIDGVLGSGKTWVALDVCL 172
Query: 192 DKDL--PMPGSTLWSNHILPCRPSGITLDIKKSSHKKLTKWLQ-AKSSAGLISVKEDKYK 248
+ M W N P + ++K ++ W + S+ +
Sbjct: 173 SYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQA 232
Query: 249 KESMLFSVNRGHP----------------------------------DYLSFKPEKRPA- 273
+ L ++ + D+LS +
Sbjct: 233 ELRRLLK-SKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISL 291
Query: 274 EKASQAVDHAASDNIQPAKILEVTEVYKPS--VHVNPIFASVGADTGR--LYTFSEACDV 329
+ S + ++ K L+ P + NP S+ A++ R L T+
Sbjct: 292 DHHSMTLTPDEVKSLL-LKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDN---- 346
Query: 330 VFNYIEKENLVKPTAKSIVVLDPTLSDALFKGAIKKGTTYPTEIHKKDLGSTFVNRMQAH 389
+ ++ + L S+ VL+P +F L
Sbjct: 347 -WKHVNCDKLTTIIESSLNVLEPAEYRKMF----------------DRL----------- 378
Query: 390 HVVSRGSQSVVRKGALKTIQIVTERRQGNKKMTKLSGL--ETFLMDPEALASELQKKFAC 447
SV A + LS + + D + ++L K
Sbjct: 379 --------SVFPPSAHIPTIL-------------LSLIWFDVIKSDVMVVVNKLHKY--- 414
Query: 448 STTVAELPGKKGQEVL------IQGGVIADVAKH--LVEQFGIPKRY 486
++ E K+ + ++ + + A H +V+ + IPK +
Sbjct: 415 --SLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTF 459
>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant
photosynthetic reaction center, peripheral antenna; HET:
CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1
Length = 154
Score = 29.9 bits (66), Expect = 1.0
Identities = 9/26 (34%), Positives = 15/26 (57%), Gaps = 2/26 (7%)
Query: 220 KKSSHKKLTKWLQ--AKSSAGLISVK 243
+K + KKL L+ A SA +++K
Sbjct: 18 EKQALKKLQASLKLYADDSAPALAIK 43
>1ofh_A ATP-dependent HSL protease ATP-binding subunit HSLU; chaperone,
hydrolase, ATP-binding; HET: ADP; 2.5A {Haemophilus
influenzae} SCOP: c.37.1.20 PDB: 1ofi_A*
Length = 310
Score = 28.8 bits (65), Expect = 4.6
Identities = 19/66 (28%), Positives = 25/66 (37%), Gaps = 6/66 (9%)
Query: 435 EALASELQKKFA-CSTTVAELPGKKGQEV---LIQGGVIADVAKHLVEQFGIPKRYIEVL 490
LA F T G G+EV + A A VEQ GI +I+ +
Sbjct: 68 RRLAKLANAPFIKVEATKFTEVGYVGKEVDSIIRDLTDSAGGAIDAVEQNGIV--FIDEI 125
Query: 491 DKTARK 496
DK +K
Sbjct: 126 DKICKK 131
>2d28_C XPSE, type II secretion ATPase XPSE; alpha-beta sandwich, protein
transport; 2.00A {Xanthomonas campestris} SCOP:
d.52.10.1 PDB: 2d27_A
Length = 149
Score = 27.7 bits (62), Expect = 5.2
Identities = 12/57 (21%), Positives = 21/57 (36%), Gaps = 14/57 (24%)
Query: 431 LMDPEAL--ASELQKKFACSTTVAELPGKKGQEVLIQGGVI--ADVAKHLVEQFGIP 483
+ L A +LQ + G +L + G++ D A+ E G+P
Sbjct: 19 RLKDTDLVRARQLQAE----------SGMGLLALLGRLGLVSERDHAETCAEVLGLP 65
>2v0u_A NPH1-1, LOV2; kinase, transferase, ATP-binding,
serine/threonine-protein kinase, light-induced signal
trans phototropin1, nucleotide-binding; HET: FMN; 1.40A
{Avena sativa} PDB: 2v0w_A* 2v1b_A* 2v1a_A* 1jnu_A*
1g28_A*
Length = 146
Score = 27.2 bits (61), Expect = 7.2
Identities = 16/85 (18%), Positives = 31/85 (36%), Gaps = 12/85 (14%)
Query: 362 AIKKGTTYPTEI--HKKDLGSTFVNRMQAHHVVSRGSQSVVRK--GALKTIQI-VTERRQ 416
AI T ++ + K G F N + R + V+ G +Q+ TE +
Sbjct: 69 AIDNQTEVTVQLINYTKS-GKKFWNLFHLQPM--RDQKGDVQYFIG----VQLDGTEHVR 121
Query: 417 GNKKMTKLSGLETFLMDPEALASEL 441
+ + ++ + + A EL
Sbjct: 122 DAAEREGVMLIKKTAENIDEAAKEL 146
>3nts_A VSDC; mono-ADP ribosyltransferase toxin, transferase; 3.40A
{Aeromonas hydrophila}
Length = 241
Score = 27.5 bits (60), Expect = 8.0
Identities = 10/38 (26%), Positives = 17/38 (44%)
Query: 56 ITHYYRDLLWGSVEGHSVPNAGFLEDVVVEDPAFLSTS 93
++ YR L E ++ +V +P F+STS
Sbjct: 118 LSFVYRGLALDKPELAALKEQFTGVGNIVVEPGFMSTS 155
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.312 0.130 0.370
Gapped
Lambda K H
0.267 0.0574 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 7,435,244
Number of extensions: 450148
Number of successful extensions: 704
Number of sequences better than 10.0: 1
Number of HSP's gapped: 692
Number of HSP's successfully gapped: 23
Length of query: 496
Length of database: 6,701,793
Length adjustment: 97
Effective length of query: 399
Effective length of database: 3,993,456
Effective search space: 1593388944
Effective search space used: 1593388944
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 59 (26.9 bits)