BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 011010
(495 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255553241|ref|XP_002517663.1| signal recognition particle 54 kD protein, putative [Ricinus
communis]
gi|223543295|gb|EEF44827.1| signal recognition particle 54 kD protein, putative [Ricinus
communis]
Length = 497
Score = 985 bits (2547), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 476/495 (96%), Positives = 485/495 (97%), Gaps = 1/495 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLAQLGGSISRAIQQMSNATIIDEK LN+CLNEITRALLQ+DVQFKLVR+MQTNIKKIV
Sbjct: 1 MVLAQLGGSISRAIQQMSNATIIDEKALNDCLNEITRALLQSDVQFKLVRDMQTNIKKIV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NLDDLAAGHNKR+IIQQAIFNELCKMLDPGKPSFTPKKGK SV+MFVGLQGSGKTTTCTK
Sbjct: 61 NLDDLAAGHNKRKIIQQAIFNELCKMLDPGKPSFTPKKGKTSVVMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSY ESDPV+IAVEGVE FK
Sbjct: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KENCDLIIVDTSGRHKQEAALFEEMRQVSEAT PDLVIFVMDSSIGQAAFDQAQAFKQS
Sbjct: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEAT-KPDLVIFVMDSSIGQAAFDQAQAFKQS 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V+VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD
Sbjct: 240 VAVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFS+E
Sbjct: 300 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSAE 359
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEML 420
LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEM
Sbjct: 360 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMF 419
Query: 421 EEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQIGGVGGLQNLMKQ 480
EEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLP MLKQIGG+GGLQNLMKQ
Sbjct: 420 EEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQMLKQIGGMGGLQNLMKQ 479
Query: 481 MGSTKDMMGMFGGGE 495
MGS KDMMGMFGGGE
Sbjct: 480 MGSAKDMMGMFGGGE 494
>gi|225442910|ref|XP_002264159.1| PREDICTED: signal recognition particle 54 kDa protein 2 [Vitis
vinifera]
Length = 495
Score = 971 bits (2509), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/495 (93%), Positives = 485/495 (97%), Gaps = 1/495 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL++LGGSISRA+QQMSNATIIDEKVLNECLNEITRALLQ+DVQFKLVR+MQTNIKK+V
Sbjct: 1 MVLSELGGSISRALQQMSNATIIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKLV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N DDLAAGHNKR+IIQQAIF ELCKMLDPGKPSFTPKKGK SV+MFVGLQGSGKTTTCTK
Sbjct: 61 NFDDLAAGHNKRKIIQQAIFQELCKMLDPGKPSFTPKKGKTSVVMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSY ESDPV+IAVEGVE FK
Sbjct: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KENCDLIIVDTSGRHKQEAALFEEMRQVSEAT PDLVIFVMDSSIGQAAFDQAQAF+QS
Sbjct: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEAT-RPDLVIFVMDSSIGQAAFDQAQAFRQS 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V+VGAVI+TKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD
Sbjct: 240 VAVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFS+E
Sbjct: 300 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSAE 359
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEML 420
LMPKGREKESQAKIKRYMTMMDSMTNEELD+SNPKLMN+SRIMRIARGSGRQVREVMEML
Sbjct: 360 LMPKGREKESQAKIKRYMTMMDSMTNEELDTSNPKLMNESRIMRIARGSGRQVREVMEML 419
Query: 421 EEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQIGGVGGLQNLMKQ 480
EEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSK++PQ MLKQIGG+G LQNLMKQ
Sbjct: 420 EEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKIIPQQMLKQIGGMGALQNLMKQ 479
Query: 481 MGSTKDMMGMFGGGE 495
+G+ KDM+GMFGGG+
Sbjct: 480 VGNNKDMLGMFGGGD 494
>gi|224059270|ref|XP_002299799.1| predicted protein [Populus trichocarpa]
gi|222847057|gb|EEE84604.1| predicted protein [Populus trichocarpa]
Length = 493
Score = 964 bits (2493), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 462/494 (93%), Positives = 482/494 (97%), Gaps = 1/494 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLAQLGGSISRAIQQMSNATIIDEK LN+CLNEITRALLQ+DVQFKLVR+MQTNIKKIV
Sbjct: 1 MVLAQLGGSISRAIQQMSNATIIDEKALNDCLNEITRALLQSDVQFKLVRDMQTNIKKIV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NLDDLAAGHNKRRIIQQAIFNELCK+LDPGK SFTPKKGK SV+MFVGLQGSGKTTTCTK
Sbjct: 61 NLDDLAAGHNKRRIIQQAIFNELCKILDPGKSSFTPKKGKTSVVMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPV+IA EGVETFK
Sbjct: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVKIAEEGVETFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KENCDLIIVDTSGRHKQEAALFEEMRQVSEAT PDL+IFVMDSSIGQAAFDQAQAFKQ
Sbjct: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEAT-KPDLIIFVMDSSIGQAAFDQAQAFKQM 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V+VGAVI+TKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD
Sbjct: 240 VAVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQN+LKMGPIGQVFSMLPGFS+E
Sbjct: 300 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNLLKMGPIGQVFSMLPGFSAE 359
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEML 420
LMPKG EKESQAKIKRYMTMMDSMTNEELDSSNPKL+NDSR+MRIARG+GR +R+VME+L
Sbjct: 360 LMPKGHEKESQAKIKRYMTMMDSMTNEELDSSNPKLLNDSRMMRIARGAGRPIRDVMEIL 419
Query: 421 EEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQIGGVGGLQNLMKQ 480
EEYKRLAK+WSKMKGLKIPKKGEMS+LSRNMNAQHMSKVLP MLKQIGG+GGLQNLMKQ
Sbjct: 420 EEYKRLAKVWSKMKGLKIPKKGEMSSLSRNMNAQHMSKVLPPQMLKQIGGMGGLQNLMKQ 479
Query: 481 MGSTKDMMGMFGGG 494
MGS KDMMGMFGGG
Sbjct: 480 MGSAKDMMGMFGGG 493
>gi|356526231|ref|XP_003531722.1| PREDICTED: signal recognition particle 54 kDa protein 2-like
isoform 1 [Glycine max]
Length = 495
Score = 964 bits (2492), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 464/495 (93%), Positives = 484/495 (97%), Gaps = 1/495 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LGGSISRA+QQMSNATIIDEKVLN+CLN+ITRALLQ+DVQFKLVR+MQTNIK IV
Sbjct: 1 MVLAELGGSISRALQQMSNATIIDEKVLNDCLNDITRALLQSDVQFKLVRDMQTNIKSIV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NLDDLAAGHNKRRIIQQA+FNELCK+LDPGKPSFT KKGKPSV+MFVGLQGSGKTTTCTK
Sbjct: 61 NLDDLAAGHNKRRIIQQAVFNELCKILDPGKPSFTLKKGKPSVVMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YA+YHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSY ESDPV+IAVEGVE FK
Sbjct: 121 YAFYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
+ENCDLIIVDTSGRHKQEAALFEEMRQVSEAT PDLVIFVMDSSIGQAAFDQAQAFKQS
Sbjct: 181 QENCDLIIVDTSGRHKQEAALFEEMRQVSEAT-KPDLVIFVMDSSIGQAAFDQAQAFKQS 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V+VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD
Sbjct: 240 VAVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPI QVFSMLPGFS+E
Sbjct: 300 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPISQVFSMLPGFSAE 359
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEML 420
LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKL+N+SR+MRIARGSGR VREVMEML
Sbjct: 360 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLINESRMMRIARGSGRPVREVMEML 419
Query: 421 EEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQIGGVGGLQNLMKQ 480
EEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLP MLKQIGG+GGLQ+LMKQ
Sbjct: 420 EEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQMLKQIGGMGGLQSLMKQ 479
Query: 481 MGSTKDMMGMFGGGE 495
MGS KDMMGMFGGG+
Sbjct: 480 MGSAKDMMGMFGGGD 494
>gi|118487996|gb|ABK95819.1| unknown [Populus trichocarpa]
Length = 495
Score = 962 bits (2486), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 461/495 (93%), Positives = 481/495 (97%), Gaps = 1/495 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLAQLGGSISRAIQQMSNATIIDEK LN+CLNEITRALLQ+DVQFKLVR+MQTNIKKIV
Sbjct: 1 MVLAQLGGSISRAIQQMSNATIIDEKALNDCLNEITRALLQSDVQFKLVRDMQTNIKKIV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NLDDLAAGHNKRRIIQQAIFNELCK+LDPGK SFTPKKGK SV+MFVGLQGSGKTTTCTK
Sbjct: 61 NLDDLAAGHNKRRIIQQAIFNELCKILDPGKSSFTPKKGKTSVVMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPV+IA EGVETFK
Sbjct: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVKIAEEGVETFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KENCDLIIVDTSGRHKQEAAL EEMRQVSEAT PDL+IFVMDSSIGQA FDQAQAFKQ
Sbjct: 181 KENCDLIIVDTSGRHKQEAALLEEMRQVSEAT-KPDLIIFVMDSSIGQAPFDQAQAFKQM 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V+VGAVI+TKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD
Sbjct: 240 VAVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQN+LKMGPIGQVFSMLPGFS+E
Sbjct: 300 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNLLKMGPIGQVFSMLPGFSAE 359
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEML 420
LMPKG EKESQAKIKRYMTMMDSMTNEELDSSNPKL+NDSR+MRIARG+GR +R+VMEML
Sbjct: 360 LMPKGHEKESQAKIKRYMTMMDSMTNEELDSSNPKLLNDSRMMRIARGAGRPIRDVMEML 419
Query: 421 EEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQIGGVGGLQNLMKQ 480
EEYKRLAK+WSKMKGLKIPKKGEMS+LSRNMNAQHMSKVLP MLKQIGG+GGLQNLMKQ
Sbjct: 420 EEYKRLAKVWSKMKGLKIPKKGEMSSLSRNMNAQHMSKVLPPQMLKQIGGMGGLQNLMKQ 479
Query: 481 MGSTKDMMGMFGGGE 495
MGS KDMMGMFGGG+
Sbjct: 480 MGSAKDMMGMFGGGD 494
>gi|224139052|ref|XP_002322968.1| predicted protein [Populus trichocarpa]
gi|222867598|gb|EEF04729.1| predicted protein [Populus trichocarpa]
Length = 491
Score = 962 bits (2486), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 466/494 (94%), Positives = 480/494 (97%), Gaps = 3/494 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LGGSISRAIQQMSNATIIDEK LN+CLNEITRALLQ+DVQFKLVR+MQTNIKKIV
Sbjct: 1 MVLAELGGSISRAIQQMSNATIIDEKALNDCLNEITRALLQSDVQFKLVRDMQTNIKKIV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NLDDLAAGHNKR+IIQQAIFNELCKMLDPGKPSFTPKKGK SV+MFVGLQGSGKTTTCTK
Sbjct: 61 NLDDLAAGHNKRKIIQQAIFNELCKMLDPGKPSFTPKKGKTSVVMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSY ESDPV+IAVEGVE FK
Sbjct: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KENCDLIIVDTSGRHKQE ALFEEMRQV+EAT PDLVIFVMDSSIGQAAFDQAQAFKQS
Sbjct: 181 KENCDLIIVDTSGRHKQEVALFEEMRQVAEAT-KPDLVIFVMDSSIGQAAFDQAQAFKQS 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V+VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD
Sbjct: 240 VAVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQN+LKMGPIGQVFSMLPGFSSE
Sbjct: 300 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNLLKMGPIGQVFSMLPGFSSE 359
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEML 420
LMPKGREKESQAKIKRYMTMMDSMTNE +SNPKLMN+SRIMRIARGSGR VR+VMEML
Sbjct: 360 LMPKGREKESQAKIKRYMTMMDSMTNE--GNSNPKLMNESRIMRIARGSGRSVRDVMEML 417
Query: 421 EEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQIGGVGGLQNLMKQ 480
EEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLP MLKQIGG+GGLQNLMKQ
Sbjct: 418 EEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQMLKQIGGMGGLQNLMKQ 477
Query: 481 MGSTKDMMGMFGGG 494
MGS KDMMGMFGGG
Sbjct: 478 MGSAKDMMGMFGGG 491
>gi|350535032|ref|NP_001234428.1| signal recognition particle 54 kDa protein 2 [Solanum lycopersicum]
gi|1711512|sp|P49972.1|SR542_SOLLC RecName: Full=Signal recognition particle 54 kDa protein 2;
Short=SRP54
gi|556902|emb|CAA84288.1| 54-kD signal recognition particle (SRP) specific protein [Solanum
lycopersicum]
Length = 499
Score = 961 bits (2483), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 461/486 (94%), Positives = 477/486 (98%), Gaps = 1/486 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LGGSISRA+QQMSNATIIDEKVLNECLNEITRALLQADVQFKLVR+M TNIKKIV
Sbjct: 1 MVLAELGGSISRALQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVRDMTTNIKKIV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NLDDLAAGHNKRRIIQQA+FNELCK+LDPGKPSFTPKKGKPS++MFVGLQGSGKTTTCTK
Sbjct: 61 NLDDLAAGHNKRRIIQQAVFNELCKILDPGKPSFTPKKGKPSIVMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPV+IAV+GVETFK
Sbjct: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVKIAVDGVETFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KENCDLIIVDTSGRHKQEAALFEEMRQV+EAT PDLVIFVMDSSIGQAAFDQAQAFKQS
Sbjct: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVAEAT-KPDLVIFVMDSSIGQAAFDQAQAFKQS 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V+VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD
Sbjct: 240 VAVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
WSGFMDKIHEVVPMDQQPELLQKLSEG+FTLRIMYEQFQNILKMGPIGQVFSMLPGFS+E
Sbjct: 300 WSGFMDKIHEVVPMDQQPELLQKLSEGHFTLRIMYEQFQNILKMGPIGQVFSMLPGFSAE 359
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEML 420
LMPKGRE ESQAKIKRYMTMMDSMTNEELDSSNPKLM DSRIMRIARGSGRQV EVM+M+
Sbjct: 360 LMPKGRENESQAKIKRYMTMMDSMTNEELDSSNPKLMTDSRIMRIARGSGRQVHEVMDMM 419
Query: 421 EEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQIGGVGGLQNLMKQ 480
EEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLP MLKQIGG+GGLQNLMKQ
Sbjct: 420 EEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQMLKQIGGMGGLQNLMKQ 479
Query: 481 MGSTKD 486
MGS KD
Sbjct: 480 MGSAKD 485
>gi|449468938|ref|XP_004152178.1| PREDICTED: signal recognition particle 54 kDa protein 2-like
[Cucumis sativus]
Length = 495
Score = 956 bits (2470), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/495 (91%), Positives = 485/495 (97%), Gaps = 1/495 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLAQLGGSISRA+QQMS+AT+IDEKVLNECLNEITRALLQ+DVQFKLVR+MQTNIKKIV
Sbjct: 1 MVLAQLGGSISRALQQMSSATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NLDDLAAGHNKR+IIQQA+FNELCKMLDPGKPSFTPKKGK SV+MFVGLQGSGKTTTCTK
Sbjct: 61 NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSVVMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSY ESDPV+IAVEGVE FK
Sbjct: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KE+CDLIIVDTSGRHKQEAALFEEMRQVSEAT PDLVIFVMDSSIGQAAFDQAQAFKQS
Sbjct: 181 KESCDLIIVDTSGRHKQEAALFEEMRQVSEAT-KPDLVIFVMDSSIGQAAFDQAQAFKQS 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V+VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD
Sbjct: 240 VAVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMY+QFQN+LKMGPI QVFSMLPG+S++
Sbjct: 300 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYDQFQNLLKMGPINQVFSMLPGYSAD 359
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEML 420
LMPKGREKESQAK+KRYMTMMDSMT+EELDS+NPKL+N+SR+MRIARGSG +V+EVMEM+
Sbjct: 360 LMPKGREKESQAKLKRYMTMMDSMTDEELDSTNPKLINESRMMRIARGSGHRVQEVMEMM 419
Query: 421 EEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQIGGVGGLQNLMKQ 480
EEYKRLAK+WSKMKGLKIPKKGEMSALSRNMNAQHMSKVLP +LKQIGG+GGLQ+LMKQ
Sbjct: 420 EEYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQIGGMGGLQSLMKQ 479
Query: 481 MGSTKDMMGMFGGGE 495
MGS KDMMGMFGGG+
Sbjct: 480 MGSNKDMMGMFGGGD 494
>gi|356554903|ref|XP_003545781.1| PREDICTED: signal recognition particle 54 kDa protein 2-like
[Glycine max]
Length = 499
Score = 951 bits (2458), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/486 (93%), Positives = 475/486 (97%), Gaps = 1/486 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LGGSISRA+QQMSNAT+IDEKVLN+CLN ITRALLQ+DVQFKLVR++QTNIK IV
Sbjct: 1 MVLAELGGSISRALQQMSNATVIDEKVLNDCLNVITRALLQSDVQFKLVRDLQTNIKNIV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NLDDLAAGHNKRRIIQQA+FNELCK+LDPGKPSFTPKKGK SV+MFVGLQGSGKTTTCTK
Sbjct: 61 NLDDLAAGHNKRRIIQQAVFNELCKILDPGKPSFTPKKGKTSVVMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSY ESDPV+IAVEGVE FK
Sbjct: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KENCDLIIVDTSGRHKQEAALFEEMRQVSEAT PDLVIFVMDSSIGQAAFDQAQAFKQS
Sbjct: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEAT-KPDLVIFVMDSSIGQAAFDQAQAFKQS 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V+VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD
Sbjct: 240 VAVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
WSGFMDKI EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFS+E
Sbjct: 300 WSGFMDKIQEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSAE 359
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEML 420
LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMN+SR+MRIARG+GRQ+REVMEML
Sbjct: 360 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNESRMMRIARGAGRQIREVMEML 419
Query: 421 EEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQIGGVGGLQNLMKQ 480
EEYKRLAKIWSKMKGLKIPKKG+MSALSRNMNAQHMSKVLP MLKQIGG+GGLQNLMKQ
Sbjct: 420 EEYKRLAKIWSKMKGLKIPKKGDMSALSRNMNAQHMSKVLPPQMLKQIGGMGGLQNLMKQ 479
Query: 481 MGSTKD 486
MGS KD
Sbjct: 480 MGSAKD 485
>gi|356550626|ref|XP_003543686.1| PREDICTED: signal recognition particle 54 kDa protein 2-like
[Glycine max]
Length = 500
Score = 950 bits (2456), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/486 (93%), Positives = 475/486 (97%), Gaps = 1/486 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LGGSISRA+Q MSNAT+IDEKVLN+CLN+ITRALLQ+DVQFKLVR+MQTNIK IV
Sbjct: 1 MVLAELGGSISRALQLMSNATVIDEKVLNDCLNDITRALLQSDVQFKLVRDMQTNIKNIV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NLDDLAAGHNKRRIIQQA+FNELCK+LDPGKPSFTPKKGK SV+MFVGLQGSGKTTTCTK
Sbjct: 61 NLDDLAAGHNKRRIIQQAVFNELCKILDPGKPSFTPKKGKTSVVMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSY ESDPV+IAVEGVE FK
Sbjct: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KENCDLIIVDTSGRHKQEA+LFEEMRQVSEAT PDLVIFVMDSSIGQAAFDQAQAFKQS
Sbjct: 181 KENCDLIIVDTSGRHKQEASLFEEMRQVSEAT-KPDLVIFVMDSSIGQAAFDQAQAFKQS 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V+VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD
Sbjct: 240 VAVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPI QVFSMLPGFS+E
Sbjct: 300 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPISQVFSMLPGFSAE 359
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEML 420
LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMN+SR+MRIARG+GRQ+REVMEML
Sbjct: 360 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNESRMMRIARGAGRQIREVMEML 419
Query: 421 EEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQIGGVGGLQNLMKQ 480
EEYKRLAKIWSKMKGLKIPKKG+MSALSRNMNAQHMSKVLP MLKQIGG+GGLQNLMKQ
Sbjct: 420 EEYKRLAKIWSKMKGLKIPKKGDMSALSRNMNAQHMSKVLPPQMLKQIGGMGGLQNLMKQ 479
Query: 481 MGSTKD 486
MGS KD
Sbjct: 480 MGSAKD 485
>gi|356519296|ref|XP_003528309.1| PREDICTED: signal recognition particle 54 kDa protein 2-like
[Glycine max]
Length = 495
Score = 947 bits (2448), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/486 (93%), Positives = 475/486 (97%), Gaps = 1/486 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LGGSISRA+QQMSNATIIDEKVLN+CLN+ITRALLQ+DVQFKLVR+MQTNIK IV
Sbjct: 1 MVLAELGGSISRALQQMSNATIIDEKVLNDCLNDITRALLQSDVQFKLVRDMQTNIKNIV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NL+DLAAGHNKRRIIQQA+FNELCK+LDPGKPSFTPKKGK SV+MFVGLQGSGKTTTCTK
Sbjct: 61 NLEDLAAGHNKRRIIQQAVFNELCKILDPGKPSFTPKKGKTSVVMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YA+YHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSY ESDPV+IAVEGVE FK
Sbjct: 121 YAFYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
+ENCDLIIVDTSGRHKQEAALFEEMRQVSEAT PDLVIFVMDSSIGQAAFDQAQAFKQS
Sbjct: 181 QENCDLIIVDTSGRHKQEAALFEEMRQVSEAT-KPDLVIFVMDSSIGQAAFDQAQAFKQS 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V+VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD
Sbjct: 240 VAVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQN+LKMGPI QVFSMLPGFS+E
Sbjct: 300 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNLLKMGPISQVFSMLPGFSAE 359
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEML 420
LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMN+SR+MRIARGSGR VREVMEML
Sbjct: 360 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNESRMMRIARGSGRPVREVMEML 419
Query: 421 EEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQIGGVGGLQNLMKQ 480
EEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLP MLKQIGG+GGLQ+LMKQ
Sbjct: 420 EEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQMLKQIGGMGGLQSLMKQ 479
Query: 481 MGSTKD 486
MGS KD
Sbjct: 480 MGSAKD 485
>gi|18402407|ref|NP_564535.1| signal recognition particle subunit SRP54 [Arabidopsis thaliana]
gi|21542461|sp|P49967.2|SR543_ARATH RecName: Full=Signal recognition particle 54 kDa protein 3;
Short=SRP54
gi|17386102|gb|AAL38597.1|AF446864_1 At1g48900/F27K7_8 [Arabidopsis thaliana]
gi|15450461|gb|AAK96524.1| At1g48900/F27K7_8 [Arabidopsis thaliana]
gi|15810010|gb|AAL06932.1| At1g48900/F27K7_8 [Arabidopsis thaliana]
gi|332194242|gb|AEE32363.1| signal recognition particle subunit SRP54 [Arabidopsis thaliana]
Length = 495
Score = 922 bits (2384), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/495 (88%), Positives = 474/495 (95%), Gaps = 1/495 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LGG I+RAIQQMSN TIIDEK LNECLNEITRALLQ+DV F LV+EMQ+NIKKIV
Sbjct: 1 MVLAELGGRITRAIQQMSNVTIIDEKALNECLNEITRALLQSDVSFPLVKEMQSNIKKIV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NL+DLAAGHNKRRII+QAIF+ELCKMLDPGKP+F PKK K SV+MFVGLQG+GKTTTCTK
Sbjct: 61 NLEDLAAGHNKRRIIEQAIFSELCKMLDPGKPAFAPKKAKASVVMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YAYYHQKKG+KPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPV+IAVEGV+TFK
Sbjct: 121 YAYYHQKKGYKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVKIAVEGVDTFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KENCDLIIVDTSGRHKQEA+LFEEMRQV+EAT PDLVIFVMDSSIGQAAFDQAQAFKQS
Sbjct: 181 KENCDLIIVDTSGRHKQEASLFEEMRQVAEAT-KPDLVIFVMDSSIGQAAFDQAQAFKQS 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V+VGAVI+TKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD
Sbjct: 240 VAVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
WSGF+DK+ EVVP DQQPELL+KLS+GNFTLRIMY+QFQNIL MGP+ +VFSMLPG S+E
Sbjct: 300 WSGFVDKLQEVVPKDQQPELLEKLSQGNFTLRIMYDQFQNILNMGPLKEVFSMLPGISAE 359
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEML 420
+MPKG EKESQAKIKRYMTMMDSMTN+ELDSSNPK+ N+SR+MRIARGSGRQVREVMEML
Sbjct: 360 MMPKGHEKESQAKIKRYMTMMDSMTNDELDSSNPKVFNESRMMRIARGSGRQVREVMEML 419
Query: 421 EEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQIGGVGGLQNLMKQ 480
EEYKRLAKIWSKMKGLKIPK G+MSALSRNMNAQHMSKVLP MLKQIGG+GGLQ+LMKQ
Sbjct: 420 EEYKRLAKIWSKMKGLKIPKNGDMSALSRNMNAQHMSKVLPPQMLKQIGGMGGLQSLMKQ 479
Query: 481 MGSTKDMMGMFGGGE 495
MGS KDMMGMFGGG+
Sbjct: 480 MGSGKDMMGMFGGGD 494
>gi|356526233|ref|XP_003531723.1| PREDICTED: signal recognition particle 54 kDa protein 2-like
isoform 2 [Glycine max]
Length = 500
Score = 920 bits (2379), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/505 (89%), Positives = 473/505 (93%), Gaps = 16/505 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LGGSISRA+QQMSNATIIDEKVLN+CLN+ITRALLQ+DVQFKLVR+MQTNIK IV
Sbjct: 1 MVLAELGGSISRALQQMSNATIIDEKVLNDCLNDITRALLQSDVQFKLVRDMQTNIKSIV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGS-------- 112
NLDDLAAGHNKRRIIQQA+FNELCK+LDPGKPSFT KKGKPSV+MFVGLQGS
Sbjct: 61 NLDDLAAGHNKRRIIQQAVFNELCKILDPGKPSFTLKKGKPSVVMFVGLQGSYYNVMRFC 120
Query: 113 --GKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVR 170
G C + KKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSY ESDPV+
Sbjct: 121 ANGMMIECLCF-----KKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVK 175
Query: 171 IAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAA 230
IAVEGVE FK+ENCDLIIVDTSGRHKQEAALFEEMRQVSEAT PDLVIFVMDSSIGQAA
Sbjct: 176 IAVEGVERFKQENCDLIIVDTSGRHKQEAALFEEMRQVSEAT-KPDLVIFVMDSSIGQAA 234
Query: 231 FDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKP 290
FDQAQAFKQSV+VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKP
Sbjct: 235 FDQAQAFKQSVAVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKP 294
Query: 291 FVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQV 350
FVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPI QV
Sbjct: 295 FVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPISQV 354
Query: 351 FSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSG 410
FSMLPGFS+ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKL+N+SR+MRIARGSG
Sbjct: 355 FSMLPGFSAELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLINESRMMRIARGSG 414
Query: 411 RQVREVMEMLEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQIGG 470
R VREVMEMLEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLP MLKQIGG
Sbjct: 415 RPVREVMEMLEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQMLKQIGG 474
Query: 471 VGGLQNLMKQMGSTKDMMGMFGGGE 495
+GGLQ+LMKQMGS KDMMGMFGGG+
Sbjct: 475 MGGLQSLMKQMGSAKDMMGMFGGGD 499
>gi|515681|gb|AAA66200.1| signal recognition particle 54 kDa subunit [Arabidopsis thaliana]
Length = 495
Score = 919 bits (2375), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/495 (88%), Positives = 473/495 (95%), Gaps = 1/495 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LGG I+RAIQQMSN TIIDEK LNECLNEITRALLQ+DV F LV+EMQ+NIKKIV
Sbjct: 1 MVLAELGGGITRAIQQMSNVTIIDEKALNECLNEITRALLQSDVSFPLVKEMQSNIKKIV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NL+DLAAGHNKRRII+QAIF+ELCKMLDPGKP+F PKK K SV+MFVGLQG+GKTTTCTK
Sbjct: 61 NLEDLAAGHNKRRIIEQAIFSELCKMLDPGKPAFAPKKRKASVVMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YAYYHQKKG+KPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPV+IAVEGV+TFK
Sbjct: 121 YAYYHQKKGYKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVKIAVEGVDTFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KENCDLIIVDTSGRHKQEA+LFEEMRQV+EAT PDLVIFVMDSSIGQAAFDQAQAFKQS
Sbjct: 181 KENCDLIIVDTSGRHKQEASLFEEMRQVAEAT-KPDLVIFVMDSSIGQAAFDQAQAFKQS 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V+VGAVI+TKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD
Sbjct: 240 VAVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
WSGF+DK+ EVVP DQQPELL+KLS+GNFTLRIMY+QFQNIL MGP+ +VFSMLPG S+E
Sbjct: 300 WSGFVDKLQEVVPKDQQPELLEKLSQGNFTLRIMYDQFQNILNMGPLKEVFSMLPGISAE 359
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEML 420
+MPKG EKESQAKIKRYMTMMDSMTN+ELDSS PK+ N+SR+MRIARGSGRQVREVMEML
Sbjct: 360 MMPKGHEKESQAKIKRYMTMMDSMTNDELDSSGPKVFNESRMMRIARGSGRQVREVMEML 419
Query: 421 EEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQIGGVGGLQNLMKQ 480
EEYKRLAKIWSKMKGLKIPK G+MSALSRNMNAQHMSKVLP MLKQIGG+GGLQ+LMKQ
Sbjct: 420 EEYKRLAKIWSKMKGLKIPKNGDMSALSRNMNAQHMSKVLPPQMLKQIGGMGGLQSLMKQ 479
Query: 481 MGSTKDMMGMFGGGE 495
MGS KDMMGMFGGG+
Sbjct: 480 MGSGKDMMGMFGGGD 494
>gi|357468165|ref|XP_003604367.1| Signal recognition particle 54 kDa protein [Medicago truncatula]
gi|355505422|gb|AES86564.1| Signal recognition particle 54 kDa protein [Medicago truncatula]
Length = 496
Score = 915 bits (2366), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/486 (89%), Positives = 468/486 (96%), Gaps = 1/486 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LGGSI+RA++QMSNATIIDEKVLNECLNEITRALLQ+DVQFKLVR+MQTNIKKIV
Sbjct: 1 MVLADLGGSITRALKQMSNATIIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NLDDLAAGHNKRRIIQQA+FNELC +LDPGKP+FTPKKGK SV+MFVGLQGSGKTTTCTK
Sbjct: 61 NLDDLAAGHNKRRIIQQAVFNELCNILDPGKPAFTPKKGKASVVMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YA+YHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSY ESDPV+IAVEGVE FK
Sbjct: 121 YAFYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KENCDLIIVDTSGRHKQEAALFEEMRQVSEAT PDLVIFVMDSSIGQAAFDQAQAFKQS
Sbjct: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEAT-KPDLVIFVMDSSIGQAAFDQAQAFKQS 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V+VGAVI+TKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLG GD
Sbjct: 240 VAVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGQGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
SGFM+KIHEVVPMDQQPELL KL EG FTLRIMYEQFQNILKMGP+ +VFSMLPGFS+E
Sbjct: 300 LSGFMNKIHEVVPMDQQPELLNKLQEGTFTLRIMYEQFQNILKMGPMSEVFSMLPGFSNE 359
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEML 420
L+PKG++++SQAKIKRYMTMMDSMTNEELDSSNPKLMN+SR+MRIARGSGRQVREVMEM+
Sbjct: 360 LLPKGKDQDSQAKIKRYMTMMDSMTNEELDSSNPKLMNESRMMRIARGSGRQVREVMEMM 419
Query: 421 EEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQIGGVGGLQNLMKQ 480
EEYKRLAKIWSKMKGLKIPKKG+M++++RNMNA HMSK+LP MLKQIGG+GGLQ+LMK
Sbjct: 420 EEYKRLAKIWSKMKGLKIPKKGDMNSMTRNMNATHMSKILPPQMLKQIGGMGGLQSLMKS 479
Query: 481 MGSTKD 486
MGS KD
Sbjct: 480 MGSNKD 485
>gi|297852530|ref|XP_002894146.1| signal recognition particle 54 kDa protein 3 [Arabidopsis lyrata
subsp. lyrata]
gi|297852532|ref|XP_002894147.1| signal recognition particle 54 kDa protein 3 [Arabidopsis lyrata
subsp. lyrata]
gi|297339988|gb|EFH70405.1| signal recognition particle 54 kDa protein 3 [Arabidopsis lyrata
subsp. lyrata]
gi|297339989|gb|EFH70406.1| signal recognition particle 54 kDa protein 3 [Arabidopsis lyrata
subsp. lyrata]
Length = 496
Score = 915 bits (2365), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/496 (88%), Positives = 472/496 (95%), Gaps = 2/496 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LGG I+RAIQQMSN TIIDEK LNECLNEITRALLQ+DV F LV+EMQ+NIKKIV
Sbjct: 1 MVLAELGGRITRAIQQMSNVTIIDEKALNECLNEITRALLQSDVSFPLVKEMQSNIKKIV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NL+DLAAGHNKRRII+QAIF+ELCKMLDPGKP+F PKK K SV+MFVGLQG+GKTTTCTK
Sbjct: 61 NLEDLAAGHNKRRIIEQAIFSELCKMLDPGKPAFAPKKAKASVVMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YAYYHQKKG+KPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPV+IAVEGV+TFK
Sbjct: 121 YAYYHQKKGYKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVKIAVEGVDTFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KENCDLIIVDTSGRHKQEA LFEEMRQV+EAT PDLVIFVMDSSIGQAAFDQAQAFKQS
Sbjct: 181 KENCDLIIVDTSGRHKQEATLFEEMRQVAEAT-KPDLVIFVMDSSIGQAAFDQAQAFKQS 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V+VGAVI+TKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD
Sbjct: 240 VAVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
WSGF+DK+ EVVP DQQPELL+KLS+GNFTLRIMY+ FQNIL MGP+ +VFSMLPG S+E
Sbjct: 300 WSGFVDKLQEVVPKDQQPELLEKLSQGNFTLRIMYDLFQNILNMGPLKEVFSMLPGISAE 359
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEML 420
+MPKG EKESQAKIKRYMTMMDSMTN+ELDSSNPK+ N+SR+MRIARGSGRQVREVMEML
Sbjct: 360 MMPKGHEKESQAKIKRYMTMMDSMTNDELDSSNPKVFNESRMMRIARGSGRQVREVMEML 419
Query: 421 EEYKR-LAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQIGGVGGLQNLMK 479
EEYKR LAKIWSKMKGLKIPK G+MSALSRNMNAQHMSKVLP MLKQIGG+GGLQ+LMK
Sbjct: 420 EEYKRLLAKIWSKMKGLKIPKNGDMSALSRNMNAQHMSKVLPPQMLKQIGGMGGLQSLMK 479
Query: 480 QMGSTKDMMGMFGGGE 495
QMGS KDMMGMFGGG+
Sbjct: 480 QMGSGKDMMGMFGGGD 495
>gi|226496107|ref|NP_001142208.1| uncharacterized protein LOC100274376 [Zea mays]
gi|194702286|gb|ACF85227.1| unknown [Zea mays]
gi|194707600|gb|ACF87884.1| unknown [Zea mays]
gi|413952289|gb|AFW84938.1| hypothetical protein ZEAMMB73_989437 [Zea mays]
Length = 496
Score = 912 bits (2357), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/483 (90%), Positives = 464/483 (96%), Gaps = 1/483 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLAQLGGSISRA+ QMSNAT+IDEKVLNECLNEI+RALLQADVQFK+VR+MQ NIK+IV
Sbjct: 1 MVLAQLGGSISRALAQMSNATVIDEKVLNECLNEISRALLQADVQFKMVRDMQANIKRIV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NL+ LAAG NKRRI+QQA+F ELC MLDPGKPSFTPKKGKPSV+MFVGLQGSGKTTTCTK
Sbjct: 61 NLEALAAGTNKRRIMQQAVFTELCTMLDPGKPSFTPKKGKPSVVMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YAYYHQKKG+KPALVCADTFRAGAFDQLKQNATKAKIPFYGSY ESDPV+IAVEGVE FK
Sbjct: 121 YAYYHQKKGFKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KENCDLIIVDTSGRHKQEAALFEEMRQVSEAT PDLVIFVMDSSIGQAAFDQAQAFKQS
Sbjct: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEAT-KPDLVIFVMDSSIGQAAFDQAQAFKQS 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
VSVGAVI+TKMDGHAKGGGALSAVAATKSPVIFIGTGEH+DEFEVFDVKPFVSRLLGMGD
Sbjct: 240 VSVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHIDEFEVFDVKPFVSRLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
W+GFMDKIHEVVP DQQPELLQKLSEG+FTLR+MYEQFQNILKMGPIGQVFSMLPGFS+E
Sbjct: 300 WAGFMDKIHEVVPTDQQPELLQKLSEGSFTLRLMYEQFQNILKMGPIGQVFSMLPGFSAE 359
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEML 420
LMPKG EKESQAKIKRYMTMMDSMT+ ELDS+NPKLM +SRI+RIARGSGR VR+V++ML
Sbjct: 360 LMPKGHEKESQAKIKRYMTMMDSMTDAELDSTNPKLMTESRIIRIARGSGRPVRDVIDML 419
Query: 421 EEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQIGGVGGLQNLMKQ 480
EEYKRLAKIW KMKGLKIPKKGEMSALSRNMN QHMSKVLP MLKQIGG+GGLQ+LMKQ
Sbjct: 420 EEYKRLAKIWGKMKGLKIPKKGEMSALSRNMNVQHMSKVLPPQMLKQIGGMGGLQSLMKQ 479
Query: 481 MGS 483
MGS
Sbjct: 480 MGS 482
>gi|242054557|ref|XP_002456424.1| hypothetical protein SORBIDRAFT_03g036030 [Sorghum bicolor]
gi|241928399|gb|EES01544.1| hypothetical protein SORBIDRAFT_03g036030 [Sorghum bicolor]
Length = 496
Score = 912 bits (2357), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/483 (90%), Positives = 463/483 (95%), Gaps = 1/483 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLAQLGGSISRA+ QMSNAT+IDEKVLN+CLNEI+RALLQADVQFK+VR+MQ NIK+IV
Sbjct: 1 MVLAQLGGSISRALAQMSNATVIDEKVLNDCLNEISRALLQADVQFKMVRDMQANIKRIV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NL+ LAAG NKRRI+QQA+F ELC MLDPGKPSFTPKKGKPSV+MFVGLQGSGKTTTCTK
Sbjct: 61 NLEALAAGTNKRRIMQQAVFTELCNMLDPGKPSFTPKKGKPSVVMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YAYYHQ+KG+KPALVCADTFRAGAFDQLKQNATKAKIPFYGSY ESDPV+IAVEGVE FK
Sbjct: 121 YAYYHQRKGFKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KENCDLIIVDTSGRHKQEAALFEEMRQVSEAT PDLVIFVMDSSIGQAAFDQAQAFKQS
Sbjct: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEAT-KPDLVIFVMDSSIGQAAFDQAQAFKQS 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
VSVGAVI+TKMDGHAKGGGALSAVAATKSPVIFIGTGEH+DEFEVFDVKPFVSRLLGMGD
Sbjct: 240 VSVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHIDEFEVFDVKPFVSRLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
WSGFMDKIHEVVP DQQPELLQKLSEG+FTLR+MYEQFQNILKMGPIGQVFSMLPGFS+E
Sbjct: 300 WSGFMDKIHEVVPTDQQPELLQKLSEGSFTLRLMYEQFQNILKMGPIGQVFSMLPGFSAE 359
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEML 420
LMPKG EKESQAKIKRYMTMMDSMT ELDS+NPKLM +SRI+RIARGSGR VR+VM+ML
Sbjct: 360 LMPKGHEKESQAKIKRYMTMMDSMTEAELDSTNPKLMTESRIIRIARGSGRPVRDVMDML 419
Query: 421 EEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQIGGVGGLQNLMKQ 480
EEYKRLAKIW KMKGLKIPKKGEMSALSRNMN QHMSKVLP MLKQIGG+GGLQ+LMKQ
Sbjct: 420 EEYKRLAKIWGKMKGLKIPKKGEMSALSRNMNVQHMSKVLPPQMLKQIGGMGGLQSLMKQ 479
Query: 481 MGS 483
MGS
Sbjct: 480 MGS 482
>gi|115440231|ref|NP_001044395.1| Os01g0772800 [Oryza sativa Japonica Group]
gi|20160917|dbj|BAB89854.1| putative signal recognition particle 54kD protein [Oryza sativa
Japonica Group]
gi|21743252|dbj|BAC03250.1| putative signal recognition particle 54kD protein [Oryza sativa
Japonica Group]
gi|32879776|dbj|BAC79360.1| signal recognition particle 54kDa subunit [Oryza sativa Japonica
Group]
gi|113533926|dbj|BAF06309.1| Os01g0772800 [Oryza sativa Japonica Group]
gi|215767979|dbj|BAH00208.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222619331|gb|EEE55463.1| hypothetical protein OsJ_03626 [Oryza sativa Japonica Group]
Length = 496
Score = 911 bits (2355), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/483 (90%), Positives = 464/483 (96%), Gaps = 1/483 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLAQLGGSISRA+ QMSNAT+IDEKVL++CLNEI+RALLQ+DVQFK+VR+MQ+NIK+IV
Sbjct: 1 MVLAQLGGSISRALAQMSNATVIDEKVLSDCLNEISRALLQSDVQFKMVRDMQSNIKRIV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NL+ LAAG NKRRIIQQA+F ELC MLDPGKPSFTPKKGKP V+MFVGLQGSGKTTTCTK
Sbjct: 61 NLETLAAGTNKRRIIQQAVFTELCNMLDPGKPSFTPKKGKPCVVMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YAYYHQ+KG+KPALVCADTFRAGAFDQLKQNATKAKIPFYGSY ESDPV+IAVEGVE FK
Sbjct: 121 YAYYHQRKGFKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KENCDLIIVDTSGRHKQEAALFEEMRQVSEAT PDLVIFVMDSSIGQAAFDQAQAFKQS
Sbjct: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEAT-KPDLVIFVMDSSIGQAAFDQAQAFKQS 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEH+DEFEVFDVKPFVSRLLGMGD
Sbjct: 240 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHIDEFEVFDVKPFVSRLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
WSGFMDKIHEVVP DQQPELLQKLSEG FTLR+MYEQFQNILKMGPIGQVFSMLPGFSSE
Sbjct: 300 WSGFMDKIHEVVPTDQQPELLQKLSEGTFTLRLMYEQFQNILKMGPIGQVFSMLPGFSSE 359
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEML 420
LMPKG EKESQAKIKRYMTMMDSMT+ ELDS+NPKLM +SRI+RIARGSGR VR+V++ML
Sbjct: 360 LMPKGHEKESQAKIKRYMTMMDSMTDGELDSTNPKLMTESRILRIARGSGRPVRDVVDML 419
Query: 421 EEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQIGGVGGLQNLMKQ 480
EEYKRLAKIWSKMKGLKIPKKGEMSALSRNMN QHMSKVLP MLKQIGG+GGLQ+LMKQ
Sbjct: 420 EEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNVQHMSKVLPPQMLKQIGGMGGLQSLMKQ 479
Query: 481 MGS 483
MGS
Sbjct: 480 MGS 482
>gi|218189132|gb|EEC71559.1| hypothetical protein OsI_03915 [Oryza sativa Indica Group]
Length = 496
Score = 908 bits (2346), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/483 (90%), Positives = 463/483 (95%), Gaps = 1/483 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLAQLGGSISRA+ QMSNAT+IDEKVL++CLNEI+RALLQ+DVQFK+VR+MQ+NIK+IV
Sbjct: 1 MVLAQLGGSISRALAQMSNATVIDEKVLSDCLNEISRALLQSDVQFKMVRDMQSNIKRIV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NL+ LAAG NKRRIIQQA+F ELC MLDPGKPSFTPKKGKP V+MFVGLQGSGKTTTCTK
Sbjct: 61 NLETLAAGTNKRRIIQQAVFTELCNMLDPGKPSFTPKKGKPCVVMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YAYYHQ+KG+KPALVCADTFRAGAFDQLKQNATKAKIPFYGSY ESDPV+IAVEGVE FK
Sbjct: 121 YAYYHQRKGFKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KENCDLIIVDTSGRHKQEAALFEEMRQVSEAT PDLVIFVMDSSIGQAAFDQAQAFKQS
Sbjct: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEAT-KPDLVIFVMDSSIGQAAFDQAQAFKQS 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGE +DEFEVFDVKPFVSRLLGMGD
Sbjct: 240 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGERIDEFEVFDVKPFVSRLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
WSGFMDKIHEVVP DQQPELLQKLSEG FTLR+MYEQFQNILKMGPIGQVFSMLPGFSSE
Sbjct: 300 WSGFMDKIHEVVPTDQQPELLQKLSEGTFTLRLMYEQFQNILKMGPIGQVFSMLPGFSSE 359
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEML 420
LMPKG EKESQAKIKRYMTMMDSMT+ ELDS+NPKLM +SRI+RIARGSGR VR+V++ML
Sbjct: 360 LMPKGHEKESQAKIKRYMTMMDSMTDGELDSTNPKLMTESRILRIARGSGRPVRDVVDML 419
Query: 421 EEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQIGGVGGLQNLMKQ 480
EEYKRLAKIWSKMKGLKIPKKGEMSALSRNMN QHMSKVLP MLKQIGG+GGLQ+LMKQ
Sbjct: 420 EEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNVQHMSKVLPPQMLKQIGGMGGLQSLMKQ 479
Query: 481 MGS 483
MGS
Sbjct: 480 MGS 482
>gi|11094805|gb|AAG29734.1|AC084414_2 signal recognition particle 54 kDa protein 2 (SRP54), putative
[Arabidopsis thaliana]
Length = 522
Score = 905 bits (2339), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/522 (83%), Positives = 473/522 (90%), Gaps = 28/522 (5%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LGG I+RAIQQMSN TIIDEK LNECLNEITRALLQ+DV F LV+EMQ+NIKKIV
Sbjct: 1 MVLAELGGRITRAIQQMSNVTIIDEKALNECLNEITRALLQSDVSFPLVKEMQSNIKKIV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NL+DLAAGHNKRRII+QAIF+ELCKMLDPGKP+F PKK K SV+MFVGLQG+GKTTTCTK
Sbjct: 61 NLEDLAAGHNKRRIIEQAIFSELCKMLDPGKPAFAPKKAKASVVMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYG------------------- 161
YAYYHQKKG+KPALVCADTFRAGAFDQLKQNATKAKIPFYG
Sbjct: 121 YAYYHQKKGYKPALVCADTFRAGAFDQLKQNATKAKIPFYGRFGLGQYLHISGLKRTSVT 180
Query: 162 --------SYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATV 213
YTESDPV+IAVEGV+TFKKENCDLIIVDTSGRHKQEA+LFEEMRQV+EAT
Sbjct: 181 YMFLCPIIHYTESDPVKIAVEGVDTFKKENCDLIIVDTSGRHKQEASLFEEMRQVAEAT- 239
Query: 214 NPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIF 273
PDLVIFVMDSSIGQAAFDQAQAFKQSV+VGAVI+TKMDGHAKGGGALSAVAATKSPVIF
Sbjct: 240 KPDLVIFVMDSSIGQAAFDQAQAFKQSVAVGAVIITKMDGHAKGGGALSAVAATKSPVIF 299
Query: 274 IGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRI 333
IGTGEHMDEFEVFDVKPFVSRLLGMGDWSGF+DK+ EVVP DQQPELL+KLS+GNFTLRI
Sbjct: 300 IGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFVDKLQEVVPKDQQPELLEKLSQGNFTLRI 359
Query: 334 MYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSN 393
MY+QFQNIL MGP+ +VFSMLPG S+E+MPKG EKESQAKIKRYMTMMDSMTN+ELDSSN
Sbjct: 360 MYDQFQNILNMGPLKEVFSMLPGISAEMMPKGHEKESQAKIKRYMTMMDSMTNDELDSSN 419
Query: 394 PKLMNDSRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNA 453
PK+ N+SR+MRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLKIPK G+MSALSRNMNA
Sbjct: 420 PKVFNESRMMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLKIPKNGDMSALSRNMNA 479
Query: 454 QHMSKVLPQGMLKQIGGVGGLQNLMKQMGSTKDMMGMFGGGE 495
QHMSKVLP MLKQIGG+GGLQ+LMKQMGS KDMMGMFGGG+
Sbjct: 480 QHMSKVLPPQMLKQIGGMGGLQSLMKQMGSGKDMMGMFGGGD 521
>gi|1711509|sp|P49971.1|SR541_SOLLC RecName: Full=Signal recognition particle 54 kDa protein 1;
Short=SRP54
gi|556900|emb|CAA84275.1| 54-kD signal recognition particle (SRP) specific protein [Solanum
lycopersicum]
Length = 496
Score = 899 bits (2323), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/487 (89%), Positives = 469/487 (96%), Gaps = 3/487 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLAQLGGSISRA+QQMSNATIIDEKVLNECLNEITRALLQADVQFKLVR+M TNIKKIV
Sbjct: 1 MVLAQLGGSISRALQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVRDMSTNIKKIV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NL+DLAAGHNKRRIIQQA++NELCK+LDPGKP+FT KKGKPSV+MFVGLQGSGKTTTCTK
Sbjct: 61 NLEDLAAGHNKRRIIQQAVYNELCKILDPGKPAFTLKKGKPSVVMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYG-SYTESDPVRIAVEGVETF 179
YAY+HQK+GWKPALVCADTFRAGAFDQLKQNATKAKIPFYG SYTESDPV+IAV+GVETF
Sbjct: 121 YAYHHQKRGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSSYTESDPVKIAVDGVETF 180
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQ 239
KKENCDLIIVDTSGRHKQEAALFEEMRQVSEA PDLVIFVMDSSIGQAAFDQAQAF+Q
Sbjct: 181 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEAQ-KPDLVIFVMDSSIGQAAFDQAQAFRQ 239
Query: 240 SVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMG 299
SV+VGAVIVTKMDGHAKGGGALS VAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMG
Sbjct: 240 SVAVGAVIVTKMDGHAKGGGALSRVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMG 299
Query: 300 DWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSS 359
D SG ++KI +VVPMDQQPELLQKLSEG+FTLRIMYEQFQ++LKMGP+G VFSMLPGFS+
Sbjct: 300 DLSGLVNKIQDVVPMDQQPELLQKLSEGHFTLRIMYEQFQSMLKMGPLG-VFSMLPGFSA 358
Query: 360 ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEM 419
E+MP+GREKESQAK KRYMTMMDSMT+EELDS+NPK++ +SRIMRIARGSGR V EVMEM
Sbjct: 359 EMMPQGREKESQAKFKRYMTMMDSMTDEELDSTNPKILTESRIMRIARGSGRLVHEVMEM 418
Query: 420 LEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQIGGVGGLQNLMK 479
LEEYKRLAKI+SKMKGLKIPKKG+MS+LSRNMNAQ+MSKVLP MLKQIGG+GGLQNLMK
Sbjct: 419 LEEYKRLAKIFSKMKGLKIPKKGDMSSLSRNMNAQNMSKVLPPQMLKQIGGMGGLQNLMK 478
Query: 480 QMGSTKD 486
QMGS KD
Sbjct: 479 QMGSAKD 485
>gi|308080100|ref|NP_001183903.1| uncharacterized protein LOC100502496 [Zea mays]
gi|238015356|gb|ACR38713.1| unknown [Zea mays]
gi|414880280|tpg|DAA57411.1| TPA: hypothetical protein ZEAMMB73_937725 [Zea mays]
Length = 494
Score = 895 bits (2312), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 426/483 (88%), Positives = 461/483 (95%), Gaps = 1/483 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLAQLGGSISRA+ QMSNAT+IDEKVLN+CLNEI+RALLQADVQFK+VR+MQ NIK+IV
Sbjct: 1 MVLAQLGGSISRALAQMSNATVIDEKVLNDCLNEISRALLQADVQFKMVRDMQANIKRIV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NL+ LAAG NKRRI+QQA+F ELC MLDPGKPSFTPKKGKPSV+MFVGLQGSGKTTTC+K
Sbjct: 61 NLEALAAGTNKRRIMQQAVFTELCNMLDPGKPSFTPKKGKPSVVMFVGLQGSGKTTTCSK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YAYYHQKKG+KPALVCADTFRAGAFDQLKQNATKAKIPFYGSY ESDPV+IAVEGVE FK
Sbjct: 121 YAYYHQKKGFKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KENCDLIIVDTSGRHKQEAALFEEMRQVSEAT PDLVIFVMDSSIGQAAFDQAQAFKQS
Sbjct: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEAT-KPDLVIFVMDSSIGQAAFDQAQAFKQS 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
VSVGAVI+TKMDGHAKGGGALSAVAATKSPVIFIGTGEH+D+FEVFDVKPFVSRLLGMGD
Sbjct: 240 VSVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHIDDFEVFDVKPFVSRLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
WSGFMDKIHEV+P DQQP+LLQKLSEG+F+LR+MYEQFQN+LKMGPIGQVFSMLPGFS+E
Sbjct: 300 WSGFMDKIHEVIPTDQQPDLLQKLSEGSFSLRLMYEQFQNLLKMGPIGQVFSMLPGFSAE 359
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEML 420
LMPKG EKESQAKIKRYMTMMDSMT+ ELDS+NPKLM +SRI+RIARGSGR VR+VM+ML
Sbjct: 360 LMPKGHEKESQAKIKRYMTMMDSMTDAELDSTNPKLMTESRIIRIARGSGRPVRDVMDML 419
Query: 421 EEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQIGGVGGLQNLMKQ 480
EEYKRLAKIW KMKGLK+ KKG+MSAL+RNMN Q MSK LP MLKQIGG+GGLQ+LMKQ
Sbjct: 420 EEYKRLAKIWGKMKGLKLQKKGDMSALTRNMNVQQMSKALPPQMLKQIGGMGGLQSLMKQ 479
Query: 481 MGS 483
MGS
Sbjct: 480 MGS 482
>gi|357133062|ref|XP_003568147.1| PREDICTED: signal recognition particle 54 kDa protein 2-like
[Brachypodium distachyon]
Length = 498
Score = 860 bits (2223), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/492 (83%), Positives = 454/492 (92%), Gaps = 2/492 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLAQLGGSISRA+QQMSNAT+IDEKVL ECLNEI+RALLQ+DVQFK+VR+MQ NI+KIV
Sbjct: 1 MVLAQLGGSISRALQQMSNATVIDEKVLGECLNEISRALLQSDVQFKMVRDMQANIRKIV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NL+ LAAG NKRRIIQQA+FNELC MLDPGKP+F PKKGKPSV+MFVGLQGSGKTTTCTK
Sbjct: 61 NLEALAAGTNKRRIIQQAVFNELCNMLDPGKPAFIPKKGKPSVVMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YAYYHQ+KG+KP+LVCADTFRAGAFDQLKQNATKAKIPFYGSY ESDPV+IAVEG+E F+
Sbjct: 121 YAYYHQRKGFKPSLVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGLERFR 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KEN DLII+DTSGRHKQEAALFEEMRQV+EAT PDLVIFVMD SIGQAAFDQAQAFKQS
Sbjct: 181 KENSDLIIIDTSGRHKQEAALFEEMRQVAEAT-KPDLVIFVMDGSIGQAAFDQAQAFKQS 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
+VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEH+DEFEVFDVKPFV RLLGMGD
Sbjct: 240 AAVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHIDEFEVFDVKPFVKRLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
SG MDKI +V+P DQ PELLQKL+EG FTLR++YEQFQN+LKMGPIGQVFSMLPGFSSE
Sbjct: 300 LSGLMDKIQDVMPADQHPELLQKLTEGTFTLRLLYEQFQNLLKMGPIGQVFSMLPGFSSE 359
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEML 420
LMPKG EKE QAKIKRYMT+MDSMTN ELDS+NPKLM +SRI+RIARGSGRQ+R+VM+ML
Sbjct: 360 LMPKGHEKEGQAKIKRYMTIMDSMTNAELDSTNPKLMTESRIVRIARGSGRQIRDVMDML 419
Query: 421 EEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQIGGVGGLQNLMKQ 480
EEYKRLAK+WSKMKGLK+PK G+MS LS+N+N Q + K LP +LKQ+GG+GGLQ LMKQ
Sbjct: 420 EEYKRLAKMWSKMKGLKMPKNGKMSDLSQNLNMQQIQKALPPQVLKQMGGLGGLQALMKQ 479
Query: 481 MGSTKDMMGMFG 492
MG KDM M G
Sbjct: 480 MGG-KDMSKMLG 490
>gi|302811179|ref|XP_002987279.1| hypothetical protein SELMODRAFT_158663 [Selaginella moellendorffii]
gi|302815043|ref|XP_002989204.1| hypothetical protein SELMODRAFT_272046 [Selaginella moellendorffii]
gi|300143104|gb|EFJ09798.1| hypothetical protein SELMODRAFT_272046 [Selaginella moellendorffii]
gi|300144914|gb|EFJ11594.1| hypothetical protein SELMODRAFT_158663 [Selaginella moellendorffii]
Length = 491
Score = 860 bits (2221), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/490 (83%), Positives = 455/490 (92%), Gaps = 4/490 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LGG ISRA+Q+M+NAT+IDEKVL CLNEI+RAL QADVQ K+V+ M TNIKKIV
Sbjct: 1 MVLAELGGRISRALQEMTNATVIDEKVLTACLNEISRALFQADVQLKMVQTMCTNIKKIV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NL+DLAAGHNKRRIIQQA+FNELC MLDPGKPSF+P+KGKPSVIMFVGLQGSGKTTTCTK
Sbjct: 61 NLEDLAAGHNKRRIIQQAVFNELCSMLDPGKPSFSPQKGKPSVIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YAY++QKKG+KPAL+CADTFRAGAFDQLKQNATKA IPFYGSYTE+DPV+IA EG+ETF+
Sbjct: 121 YAYHYQKKGFKPALICADTFRAGAFDQLKQNATKANIPFYGSYTETDPVKIAQEGLETFR 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
E CDLIIVDTSGRHKQEAALFEEMRQV+ AT +PDLVIFVMD SIGQAAFDQAQAFKQS
Sbjct: 181 AEKCDLIIVDTSGRHKQEAALFEEMRQVAAAT-SPDLVIFVMDGSIGQAAFDQAQAFKQS 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
SVGAVI+TKMDGHAKGGGALSAVAATKSPVIFIGTGEH+DEFE F+ KPFVSRLLGMGD
Sbjct: 240 ASVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHIDEFETFETKPFVSRLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
W+GFMD+I EVVPMDQQPEL+QKL++GNFTLR+MYEQFQNI+ MGP+ QV SM+PGFSSE
Sbjct: 300 WAGFMDRIQEVVPMDQQPELIQKLTDGNFTLRLMYEQFQNIMSMGPLNQVMSMIPGFSSE 359
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEM 419
LMPKGREKESQAKIK++MTMMDSMT+ ELDS+NPKL + SR+MR+ARGSGR VR+V EM
Sbjct: 360 LMPKGREKESQAKIKKFMTMMDSMTSAELDSTNPKLFAEASRVMRVARGSGRSVRDVTEM 419
Query: 420 LEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQIGGVGGLQNLMK 479
LEEYKRLAK+WSKMKGLKIPKKG+MSA++RNMNAQHMSKVLP MLKQ+GG+GGLQNLMK
Sbjct: 420 LEEYKRLAKLWSKMKGLKIPKKGDMSAMARNMNAQHMSKVLPPQMLKQMGGLGGLQNLMK 479
Query: 480 QM--GSTKDM 487
Q G KDM
Sbjct: 480 QFGGGGPKDM 489
>gi|1711511|sp|P49969.1|SR542_HORVU RecName: Full=Signal recognition particle 54 kDa protein 2;
Short=SRP54
gi|1020002|gb|AAA79355.1| signal recognition particle 54 kDa subunit [Hordeum vulgare]
gi|326510077|dbj|BAJ87255.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 497
Score = 856 bits (2211), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/487 (83%), Positives = 452/487 (92%), Gaps = 2/487 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLAQLGGSISRA+ QMSNAT+IDEKVL ECLNEI+RALLQ+DVQFK+VR+MQTNI+KIV
Sbjct: 1 MVLAQLGGSISRALAQMSNATVIDEKVLGECLNEISRALLQSDVQFKMVRDMQTNIRKIV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NL+ LAAG NKRRIIQQA+F ELC MLDPGKP+FTPKKGKPSV+MFVGLQGSGKTTTCTK
Sbjct: 61 NLETLAAGTNKRRIIQQAVFTELCNMLDPGKPAFTPKKGKPSVVMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YAYYHQ+KG+KP+LVCADTFRAGAFDQLKQNATKAKIPFYGSY ESDPV+IAVEG+E F+
Sbjct: 121 YAYYHQRKGFKPSLVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGLERFR 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KEN DLII+DTSGRHKQEAALFEEMRQV+EAT PDLVIFVMD SIGQAAFDQAQAFKQS
Sbjct: 181 KENSDLIIIDTSGRHKQEAALFEEMRQVAEAT-KPDLVIFVMDGSIGQAAFDQAQAFKQS 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
SVGAVI+TK+DGHAKGGGALSAVAATKSPVIFIGTGEH+DEFE+FDVKPFVSRLLGMGD
Sbjct: 240 ASVGAVIITKLDGHAKGGGALSAVAATKSPVIFIGTGEHIDEFEIFDVKPFVSRLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
SG MDKI +V+P DQQPELL KL+EG FTLR++YEQFQN+LKMGPIGQVFSMLPGFSSE
Sbjct: 300 LSGLMDKIQDVMPADQQPELLAKLAEGTFTLRLLYEQFQNLLKMGPIGQVFSMLPGFSSE 359
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEML 420
LMPKG EKE QAKIKRYMT+MDSMT ELDS+NPKLM +SRI+RIARGSGRQ+R+V +ML
Sbjct: 360 LMPKGHEKEGQAKIKRYMTIMDSMTAAELDSTNPKLMTESRIIRIARGSGRQIRDVTDML 419
Query: 421 EEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQIGGVGGLQNLMKQ 480
EEYKRLAK+WSKMKGLK+PK G+MS LS+N+N Q M+K LP +LKQ+GG+GGLQ LMKQ
Sbjct: 420 EEYKRLAKMWSKMKGLKMPKNGKMSDLSQNLNIQQMTKALPPQVLKQMGGMGGLQALMKQ 479
Query: 481 MGSTKDM 487
MG KDM
Sbjct: 480 MGG-KDM 485
>gi|1711508|sp|P49968.1|SR541_HORVU RecName: Full=Signal recognition particle 54 kDa protein 1;
Short=SRP54
gi|1020000|gb|AAA79354.1| signal recognition particle 54 kDa subunit [Hordeum vulgare]
Length = 497
Score = 853 bits (2204), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/487 (83%), Positives = 451/487 (92%), Gaps = 2/487 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLAQLGGSISRA+ QMSNAT+IDEKVL ECLNEI+RALLQ+DVQFK+VR+MQTNI+KIV
Sbjct: 1 MVLAQLGGSISRALAQMSNATVIDEKVLGECLNEISRALLQSDVQFKMVRDMQTNIRKIV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NL+ LAAG NKRRIIQQA+F ELC MLDPGKP+FT KKGKPSV+MFVGLQGSGKTTTCTK
Sbjct: 61 NLETLAAGTNKRRIIQQAVFTELCNMLDPGKPAFTTKKGKPSVVMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YAYYHQ+KG+KP+LVCADTFRAGAFDQLKQNATKAKIPFYGSY ESDPV+IAVEG+E F+
Sbjct: 121 YAYYHQRKGFKPSLVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGLERFR 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KEN DLII+DTSGRHKQEAALFEEMRQV+EAT PDLVIFVMD SIGQAAFDQAQAFKQS
Sbjct: 181 KENSDLIIIDTSGRHKQEAALFEEMRQVAEAT-KPDLVIFVMDGSIGQAAFDQAQAFKQS 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
SVGAVI+TK+DGHAKGGGALSAVAATKSPVIFIGTGEH+DEFE+FDVKPFVSRLLGMGD
Sbjct: 240 ASVGAVIITKLDGHAKGGGALSAVAATKSPVIFIGTGEHIDEFEIFDVKPFVSRLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
SG MDKI +V+P DQQPELL KL+EG FTLR++YEQFQN+LKMGPIGQVFSMLPGFSSE
Sbjct: 300 LSGLMDKIQDVMPADQQPELLAKLAEGTFTLRLLYEQFQNLLKMGPIGQVFSMLPGFSSE 359
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEML 420
LMPKG EKE QAKIKRYMT+MDSMT ELDS+NPKLM +SRI+RIARGSGRQ+R+V +ML
Sbjct: 360 LMPKGHEKEGQAKIKRYMTIMDSMTAAELDSTNPKLMTESRIIRIARGSGRQIRDVTDML 419
Query: 421 EEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQIGGVGGLQNLMKQ 480
EEYKRLAK+WSKMKGLK+PK G+MS LS+N+N Q M+K LP +LKQ+GG+GGLQ LMKQ
Sbjct: 420 EEYKRLAKMWSKMKGLKMPKNGKMSDLSQNLNIQQMTKALPPQVLKQMGGMGGLQALMKQ 479
Query: 481 MGSTKDM 487
MG KDM
Sbjct: 480 MGG-KDM 485
>gi|515679|gb|AAA66199.1| signal recognition particle 54 kDa subunit [Arabidopsis thaliana]
Length = 495
Score = 844 bits (2180), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/493 (81%), Positives = 449/493 (91%), Gaps = 1/493 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LGG I AIQ+M+N TIIDEK LN+CLNEITRALLQ+DV F LV+EMQTNIKKIV
Sbjct: 1 MVLAELGGRIMSAIQKMNNVTIIDEKALNDCLNEITRALLQSDVSFPLVKEMQTNIKKIV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NL+DLAAGHNKRRII+QAIF+ELCKMLDPGK +F PKK KP V+MFVGLQGSGKTTTCTK
Sbjct: 61 NLEDLAAGHNKRRIIEQAIFSELCKMLDPGKSAFAPKKAKPRVVMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YAYYHQKKG+KPALVCADTFRAGAFDQLKQNATK+KIP+YGSYT SDPV+IAVEGV+ FK
Sbjct: 121 YAYYHQKKGYKPALVCADTFRAGAFDQLKQNATKSKIPYYGSYTGSDPVKIAVEGVDRFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KENCDLIIVDTSGRHKQ+A+LFEEMRQ+SEAT PDLVIFVMDSSIGQ AF+QA+AFKQ+
Sbjct: 181 KENCDLIIVDTSGRHKQQASLFEEMRQISEAT-KPDLVIFVMDSSIGQTAFEQARAFKQT 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V+VGAVI+TKMDGHAKGGG LSAVAATKSPVIFIGTGEHMDEFEVFD KPFVSRLLG GD
Sbjct: 240 VAVGAVIITKMDGHAKGGGTLSAVAATKSPVIFIGTGEHMDEFEVFDAKPFVSRLLGNGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
SGF++K+ EVVP DQQPELL+ LS G FTLRIMY+QFQN+L MGP+ +VFSMLPG +E
Sbjct: 300 MSGFVNKLQEVVPKDQQPELLEMLSHGKFTLRIMYDQFQNMLNMGPLKEVFSMLPGMRAE 359
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEML 420
+MP+G EKESQA+IKRYMTMMDSMTNEELDSSNPK+ N+SRIMRIARGSGR VREVMEML
Sbjct: 360 MMPEGHEKESQAEIKRYMTMMDSMTNEELDSSNPKVFNESRIMRIARGSGRIVREVMEML 419
Query: 421 EEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQIGGVGGLQNLMKQ 480
EEYKRL +W K+KGLK +KG MSALS+N N+Q +SKVLP MLKQIGG+ GLQ+LMKQ
Sbjct: 420 EEYKRLTTMWGKVKGLKNLEKGNMSALSKNKNSQQLSKVLPAQMLKQIGGMSGLQSLMKQ 479
Query: 481 MGSTKDMMGMFGG 493
MGS KD+MGMFGG
Sbjct: 480 MGSGKDLMGMFGG 492
>gi|414880279|tpg|DAA57410.1| TPA: hypothetical protein ZEAMMB73_937725 [Zea mays]
Length = 472
Score = 841 bits (2172), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/483 (84%), Positives = 440/483 (91%), Gaps = 23/483 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLAQLGGSISRA+ QMSNAT+IDEKVLN+CLNEI+RALLQADVQFK+VR+MQ NIK+IV
Sbjct: 1 MVLAQLGGSISRALAQMSNATVIDEKVLNDCLNEISRALLQADVQFKMVRDMQANIKRIV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NL+ LAAG NKRRI+QQA+F ELC MLDPGKPSFTPKKGKPSV+MFVGLQGSGKTTTC+K
Sbjct: 61 NLEALAAGTNKRRIMQQAVFTELCNMLDPGKPSFTPKKGKPSVVMFVGLQGSGKTTTCSK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YAYYHQKKG+KPALVCADTFRAGAFDQLKQNATKAKIPFYGSY ESDPV+IAVEGVE FK
Sbjct: 121 YAYYHQKKGFKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KENCDLIIVDTSGRHKQEAALFEEMRQVSEAT PDLVIFVMDSSIGQAAFDQAQAFKQS
Sbjct: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEAT-KPDLVIFVMDSSIGQAAFDQAQAFKQS 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
VSVGAVI+TKMDGHAKGGGALSAVAATKSPVIFIGTGEH+D+FEVFDVKPFVSRLLGMGD
Sbjct: 240 VSVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHIDDFEVFDVKPFVSRLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
WSGFMDKIHEV+P DQQP+LLQKLSEG+F+LR+MYEQFQN+LKMGPIG
Sbjct: 300 WSGFMDKIHEVIPTDQQPDLLQKLSEGSFSLRLMYEQFQNLLKMGPIG------------ 347
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEML 420
QAKIKRYMTMMDSMT+ ELDS+NPKLM +SRI+RIARGSGR VR+VM+ML
Sbjct: 348 ----------QAKIKRYMTMMDSMTDAELDSTNPKLMTESRIIRIARGSGRPVRDVMDML 397
Query: 421 EEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQIGGVGGLQNLMKQ 480
EEYKRLAKIW KMKGLK+ KKG+MSAL+RNMN Q MSK LP MLKQIGG+GGLQ+LMKQ
Sbjct: 398 EEYKRLAKIWGKMKGLKLQKKGDMSALTRNMNVQQMSKALPPQMLKQIGGMGGLQSLMKQ 457
Query: 481 MGS 483
MGS
Sbjct: 458 MGS 460
>gi|297743482|emb|CBI36349.3| unnamed protein product [Vitis vinifera]
Length = 431
Score = 837 bits (2163), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/422 (94%), Positives = 415/422 (98%), Gaps = 1/422 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL++LGGSISRA+QQMSNATIIDEKVLNECLNEITRALLQ+DVQFKLVR+MQTNIKK+V
Sbjct: 1 MVLSELGGSISRALQQMSNATIIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKLV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N DDLAAGHNKR+IIQQAIF ELCKMLDPGKPSFTPKKGK SV+MFVGLQGSGKTTTCTK
Sbjct: 61 NFDDLAAGHNKRKIIQQAIFQELCKMLDPGKPSFTPKKGKTSVVMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSY ESDPV+IAVEGVE FK
Sbjct: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KENCDLIIVDTSGRHKQEAALFEEMRQVSEAT PDLVIFVMDSSIGQAAFDQAQAF+QS
Sbjct: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEAT-RPDLVIFVMDSSIGQAAFDQAQAFRQS 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V+VGAVI+TKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD
Sbjct: 240 VAVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFS+E
Sbjct: 300 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSAE 359
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEML 420
LMPKGREKESQAKIKRYMTMMDSMTNEELD+SNPKLMN+SRIMRIARGSGRQVREVMEML
Sbjct: 360 LMPKGREKESQAKIKRYMTMMDSMTNEELDTSNPKLMNESRIMRIARGSGRQVREVMEML 419
Query: 421 EE 422
E+
Sbjct: 420 ED 421
>gi|227202754|dbj|BAH56850.1| AT1G48900 [Arabidopsis thaliana]
Length = 450
Score = 819 bits (2116), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 398/495 (80%), Positives = 432/495 (87%), Gaps = 46/495 (9%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LGG I+RAIQQMSN TIIDEK LNECLNEITRALLQ+DV F LV+EMQ+NIKKIV
Sbjct: 1 MVLAELGGRITRAIQQMSNVTIIDEKALNECLNEITRALLQSDVSFPLVKEMQSNIKKIV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NL+DLAAGHNKRRII+QAIF+ELCKMLDPGKP+F PKK K SV+MFVGLQG+GKTTTCTK
Sbjct: 61 NLEDLAAGHNKRRIIEQAIFSELCKMLDPGKPAFAPKKAKASVVMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YAYYHQKKG+KPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPV+IAVEGV+TFK
Sbjct: 121 YAYYHQKKGYKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVKIAVEGVDTFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KENCDLIIVDTSGRHKQEA+LFEEMRQV+EAT PDLVIFVMDSSIGQAAFDQAQAFKQS
Sbjct: 181 KENCDLIIVDTSGRHKQEASLFEEMRQVAEAT-KPDLVIFVMDSSIGQAAFDQAQAFKQS 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V+VGAVI+TKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD
Sbjct: 240 VAVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
WSGF+DK+ EVVP DQQPELL+KLS+GNFTLRIMY+QFQNIL MGP+ +VFSMLPG S+E
Sbjct: 300 WSGFVDKLQEVVPKDQQPELLEKLSQGNFTLRIMYDQFQNILNMGPLKEVFSMLPGISAE 359
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEML 420
+MPKG EKESQAKIKRYMTMMDSMTN+ELDSSNPK+ N+SR+MRIARGSGRQVREVMEML
Sbjct: 360 MMPKGHEKESQAKIKRYMTMMDSMTNDELDSSNPKVFNESRMMRIARGSGRQVREVMEML 419
Query: 421 EEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQIGGVGGLQNLMKQ 480
KQIGG+GGLQ+LMKQ
Sbjct: 420 ---------------------------------------------KQIGGMGGLQSLMKQ 434
Query: 481 MGSTKDMMGMFGGGE 495
MGS KDMMGMFGGG+
Sbjct: 435 MGSGKDMMGMFGGGD 449
>gi|15239909|ref|NP_199761.1| Signal recognition particle SRP54 subunit protein [Arabidopsis
thaliana]
gi|341942066|sp|P49966.2|SR542_ARATH RecName: Full=Signal recognition particle 54 kDa protein 2;
Short=SRP54
gi|10177616|dbj|BAB10763.1| SRP54 (signal recognition particle 54 KDa) protein [Arabidopsis
thaliana]
gi|332008438|gb|AED95821.1| Signal recognition particle SRP54 subunit protein [Arabidopsis
thaliana]
Length = 497
Score = 802 bits (2072), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/495 (78%), Positives = 437/495 (88%), Gaps = 3/495 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LGG I AIQ+M+N TIIDEK LN+CLNEITRALLQ+DV F LV+EMQTNIKKIV
Sbjct: 1 MVLAELGGRIMSAIQKMNNVTIIDEKALNDCLNEITRALLQSDVSFPLVKEMQTNIKKIV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGS--GKTTTC 118
NL+DLAAGHNKRRII+QAIF+ELCKMLDPGK +F PKK KPSV+MFVGLQG K
Sbjct: 61 NLEDLAAGHNKRRIIEQAIFSELCKMLDPGKSAFAPKKAKPSVVMFVGLQGEVLEKPQLV 120
Query: 119 TKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVET 178
++KG+KPALVCADTFRAGAFDQLKQNATK+KIP+YGSYT SDPV+IAVEGV+
Sbjct: 121 PSMLIIIRRKGYKPALVCADTFRAGAFDQLKQNATKSKIPYYGSYTGSDPVKIAVEGVDR 180
Query: 179 FKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFK 238
FKKENCDLIIVDTSGRHKQ+A+LFEEMRQ+SEAT PDLVIFVMDSSIGQ AF+QA+AFK
Sbjct: 181 FKKENCDLIIVDTSGRHKQQASLFEEMRQISEAT-KPDLVIFVMDSSIGQTAFEQARAFK 239
Query: 239 QSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGM 298
Q+V+VGAVI+TKMDGHAKGGG LSAVAATKSPVIFIGTGEHMDEFEVFD KPFVSRLLG
Sbjct: 240 QTVAVGAVIITKMDGHAKGGGTLSAVAATKSPVIFIGTGEHMDEFEVFDAKPFVSRLLGN 299
Query: 299 GDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFS 358
GD SGF++K+ EVVP DQQPELL+ LS G FTLRIMY+QFQN+L MGP+ +VFSMLPG
Sbjct: 300 GDMSGFVNKLQEVVPKDQQPELLEMLSHGKFTLRIMYDQFQNMLNMGPLKEVFSMLPGMR 359
Query: 359 SELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVME 418
+E+MP+G EKESQAKIKRYMTMMDSMTNEELDSSNPK+ N+SRIMRIARGSGR VREVME
Sbjct: 360 AEMMPEGHEKESQAKIKRYMTMMDSMTNEELDSSNPKVFNESRIMRIARGSGRIVREVME 419
Query: 419 MLEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQIGGVGGLQNLM 478
MLEEYKRL +W K+KGLK +KG MSALS+N N+Q +SKVLP MLKQIGG+ GLQ+LM
Sbjct: 420 MLEEYKRLTTMWGKVKGLKNLEKGNMSALSKNKNSQQLSKVLPAQMLKQIGGMSGLQSLM 479
Query: 479 KQMGSTKDMMGMFGG 493
KQMGS KD+MGMFGG
Sbjct: 480 KQMGSGKDLMGMFGG 494
>gi|357131064|ref|XP_003567163.1| PREDICTED: signal recognition particle 54 kDa protein 2-like
[Brachypodium distachyon]
Length = 499
Score = 801 bits (2069), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/493 (78%), Positives = 438/493 (88%), Gaps = 2/493 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLAQLGGSI+RA+ +MSN T+IDEKV +CLN+ITRALLQADVQFK+V ++Q+NIK++V
Sbjct: 1 MVLAQLGGSITRALAKMSNDTVIDEKVFGDCLNDITRALLQADVQFKMVCDLQSNIKRVV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NL+ LAAG NKR II+QA+F+ELC MLDPGKPSF+PKKG P V+MFVGLQGSGKTTTCTK
Sbjct: 61 NLEALAAGTNKRGIIKQAVFSELCNMLDPGKPSFSPKKGNPCVVMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YAYYHQ+KG+KPALVCADTFRAGAFDQLKQNATKAKIPFYGSY ESDPV+IAVEGVE F+
Sbjct: 121 YAYYHQRKGFKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYLESDPVKIAVEGVERFE 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KEN DLII+DTSGRHKQEAALFEEMRQ+SEAT PDLVIFVMDSSIGQAAFDQAQAFKQS
Sbjct: 181 KENYDLIILDTSGRHKQEAALFEEMRQISEAT-QPDLVIFVMDSSIGQAAFDQAQAFKQS 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
VSVGAVIVTKMDGHAKGGGALS+VAATKSPVIF GTGEH+DEFEVFDVKPFVSRLLGMGD
Sbjct: 240 VSVGAVIVTKMDGHAKGGGALSSVAATKSPVIFTGTGEHIDEFEVFDVKPFVSRLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
WSGFM+KIHEVVP DQQPE LQKL++ FTLR+MYEQFQNI MGPI QV SML GF +E
Sbjct: 300 WSGFMNKIHEVVPADQQPEFLQKLNQKIFTLRLMYEQFQNIRNMGPISQVLSMLRGFRAE 359
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEML 420
LMP+G E+ESQAKIKRYMT+MDSMT+ ELDS N K MN+SRI+RIARGSGR VR+V++ML
Sbjct: 360 LMPQGHEQESQAKIKRYMTIMDSMTDAELDSPNLKFMNESRIIRIARGSGRPVRDVLDML 419
Query: 421 EEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQIGGVGGLQNLMKQ 480
EEYKRLAKI M +K KKG+ + RN N Q + LP +LKQIGGVGGLQ+L+KQ
Sbjct: 420 EEYKRLAKICISMSNIKPHKKGDKRPVVRNNNIQQIINALPPQVLKQIGGVGGLQSLVKQ 479
Query: 481 MGSTKDMMGMFGG 493
+ S KDM G+FGG
Sbjct: 480 LDS-KDMSGLFGG 491
>gi|145324887|ref|NP_001077690.1| signal recognition particle subunit SRP54 [Arabidopsis thaliana]
gi|332194243|gb|AEE32364.1| signal recognition particle subunit SRP54 [Arabidopsis thaliana]
Length = 431
Score = 787 bits (2032), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/431 (86%), Positives = 407/431 (94%), Gaps = 4/431 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LGG I+RAIQQMSN TIIDEK LNECLNEITRALLQ+DV F LV+EMQ+NIKKIV
Sbjct: 1 MVLAELGGRITRAIQQMSNVTIIDEKALNECLNEITRALLQSDVSFPLVKEMQSNIKKIV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NL+DLAAGHNKRRII+QAIF+ELCKMLDPGKP+F PKK K SV+MFVGLQG+GKTTTCTK
Sbjct: 61 NLEDLAAGHNKRRIIEQAIFSELCKMLDPGKPAFAPKKAKASVVMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YAYYHQKKG+KPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPV+IAVEGV+TFK
Sbjct: 121 YAYYHQKKGYKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVKIAVEGVDTFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KENCDLIIVDTSGRHKQEA+LFEEMRQV+EAT PDLVIFVMDSSIGQAAFDQAQAFKQS
Sbjct: 181 KENCDLIIVDTSGRHKQEASLFEEMRQVAEAT-KPDLVIFVMDSSIGQAAFDQAQAFKQS 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V+VGAVI+TKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD
Sbjct: 240 VAVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
WSGF+DK+ EVVP DQQPELL+KLS+GNFTLRIMY+QFQNIL MGP+ +VFSMLPG S+E
Sbjct: 300 WSGFVDKLQEVVPKDQQPELLEKLSQGNFTLRIMYDQFQNILNMGPLKEVFSMLPGISAE 359
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEML 420
+MPKG EKESQAKIKRYMTMMDSMTN+ELDSSNPK+ N+SR+MRIARGSGRQVREVME+
Sbjct: 360 MMPKGHEKESQAKIKRYMTMMDSMTNDELDSSNPKVFNESRMMRIARGSGRQVREVMEIC 419
Query: 421 EEYKRLAKIWS 431
RLA W+
Sbjct: 420 SS--RLAA-WA 427
>gi|18394225|ref|NP_563970.1| Signal recognition particle protein 1 [Arabidopsis thaliana]
gi|586036|sp|P37106.1|SR541_ARATH RecName: Full=Signal recognition particle 54 kDa protein 1;
Short=SRP54
gi|5103829|gb|AAD39659.1|AC007591_24 Identical to gb|L19997 signal recognition particle 54 kDa subunit
(Srp54-1) from Arabidopsis thaliana. ESTs gb|T88590 and
gb|T20603 come from this gene [Arabidopsis thaliana]
gi|12745001|gb|AAK06880.1|AF344329_1 unknown protein [Arabidopsis thaliana]
gi|304111|gb|AAA19728.1| signal recognition particle 54 kDa subunit [Arabidopsis thaliana]
gi|21592315|gb|AAM64266.1| signal recognition particle 54 kDa protein 2 (SRP54), putative
[Arabidopsis thaliana]
gi|62320715|dbj|BAD95382.1| putative signal recognition particle 54 kDa subunit [Arabidopsis
thaliana]
gi|332191180|gb|AEE29301.1| Signal recognition particle protein 1 [Arabidopsis thaliana]
Length = 479
Score = 786 bits (2030), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/486 (79%), Positives = 430/486 (88%), Gaps = 17/486 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LGG I+RAIQQM+N TIIDEKVLN+ LNEITRALLQ+DV F LV +MQTNIKKIV
Sbjct: 1 MVLAELGGRITRAIQQMNNVTIIDEKVLNDFLNEITRALLQSDVSFGLVEKMQTNIKKIV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NLDDLAAGHNKR II+QAIF ELC+MLDPGKP+F PKK KPSV+MFVGLQG+GKTTTCTK
Sbjct: 61 NLDDLAAGHNKRLIIEQAIFKELCRMLDPGKPAFAPKKAKPSVVMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YAYYHQKKG+K ALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPV+IAVEGV+ FK
Sbjct: 121 YAYYHQKKGYKAALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVKIAVEGVDRFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KE CDLIIVDTSGRHKQ A+LFEEMRQV+EAT PDLVIFVMDSSIGQAAF+QA+AFK++
Sbjct: 181 KEKCDLIIVDTSGRHKQAASLFEEMRQVAEAT-EPDLVIFVMDSSIGQAAFEQAEAFKET 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
VSVGAVI+TKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLG GD
Sbjct: 240 VSVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGKGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
WSG +DK+ EVVP D Q EL++ LS+GNFTLR MY+QFQ L++ P+ Q+FSMLPG S+E
Sbjct: 300 WSGLVDKLQEVVPKDLQNELVENLSQGNFTLRSMYDQFQCSLRI-PLNQLFSMLPGISAE 358
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEML 420
+MPKG +ES+ K+KRYMTMMDSMTN+ELDS NPK+ N+SRIMRIARGSGR VREVMEML
Sbjct: 359 MMPKGHGEESRVKMKRYMTMMDSMTNKELDSPNPKIFNESRIMRIARGSGRLVREVMEML 418
Query: 421 EEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQIGGVGGLQNLMKQ 480
EEYKR+AK MKG+KIPK G+ MSKV+P MLKQ+GG+ GLQ+LMKQ
Sbjct: 419 EEYKRIAKT---MKGIKIPKNGD------------MSKVIPPQMLKQMGGMSGLQSLMKQ 463
Query: 481 MGSTKD 486
MGS KD
Sbjct: 464 MGSAKD 469
>gi|115464807|ref|NP_001056003.1| Os05g0509500 [Oryza sativa Japonica Group]
gi|33235565|dbj|BAC80140.1| signal recognition particle 54kDa subunit [Oryza sativa Japonica
Group]
gi|48475202|gb|AAT44271.1| putative signal recognition particle 54 KD protein (SRP54) [Oryza
sativa Japonica Group]
gi|113579554|dbj|BAF17917.1| Os05g0509500 [Oryza sativa Japonica Group]
gi|215697189|dbj|BAG91183.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222632180|gb|EEE64312.1| hypothetical protein OsJ_19149 [Oryza sativa Japonica Group]
Length = 483
Score = 763 bits (1970), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 362/482 (75%), Positives = 421/482 (87%), Gaps = 2/482 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLAQLGGSISRA+ QMSNAT+ID+K +CL+EI RALLQ+DVQ ++V +M+ NI++ V
Sbjct: 1 MVLAQLGGSISRALAQMSNATVIDDKAFADCLHEIARALLQSDVQIRMVSDMRANIRRAV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NLD L AG NKRRIIQQA+F ELC MLDPGKPSFTP KGKPSV+MFVGLQGSGKTTTCTK
Sbjct: 61 NLDALPAGTNKRRIIQQAVFAELCNMLDPGKPSFTPTKGKPSVVMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YA+YHQ KG+KP+LVCADTFRAGAFDQLKQNATKAKIP+YGSY ESDPV+IAVEGVE F+
Sbjct: 121 YAHYHQLKGFKPSLVCADTFRAGAFDQLKQNATKAKIPYYGSYMESDPVKIAVEGVERFR 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KE DLIIVDTSGRHKQEAALFEEMRQV+EAT PDLVIFVMD SIGQAAFDQAQAFKQS
Sbjct: 181 KEKSDLIIVDTSGRHKQEAALFEEMRQVAEAT-KPDLVIFVMDGSIGQAAFDQAQAFKQS 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
SVGAVIVTK+DGHAKGGGALSAVAATKSPV+FIGTGEHM +FEVFDVKPFVSRLLGMGD
Sbjct: 240 ASVGAVIVTKLDGHAKGGGALSAVAATKSPVVFIGTGEHMQDFEVFDVKPFVSRLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
SG ++KI + +P DQQPEL+Q+L EG FTLR+ YE FQN+L MGPIGQV SM+PGF SE
Sbjct: 300 LSGLVNKIKDAMPADQQPELMQRLIEGTFTLRVFYELFQNLLNMGPIGQVLSMIPGFRSE 359
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEML 420
LMPKG +KESQAKIKRYMT+MDSMTN ELDS+NPKLM++SRI R+ARGSGR +++V +ML
Sbjct: 360 LMPKGHDKESQAKIKRYMTIMDSMTNAELDSTNPKLMSESRIKRVARGSGRTMKDVTDML 419
Query: 421 EEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQIGGVGGLQNLMKQ 480
EEYKR+AK+ SK+K K+PK + + ++ ++ ++P+ +L QIGGV LQ++MKQ
Sbjct: 420 EEYKRIAKVCSKLKK-KLPKNMDRNVMNNKDTLNTINNLIPKQLLNQIGGVNPLQSVMKQ 478
Query: 481 MG 482
MG
Sbjct: 479 MG 480
>gi|125552939|gb|EAY98648.1| hypothetical protein OsI_20572 [Oryza sativa Indica Group]
Length = 483
Score = 762 bits (1967), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/482 (74%), Positives = 421/482 (87%), Gaps = 2/482 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLAQLGGSISRA+ QMSNAT+ID+K +CL+EI RALLQ+DVQ ++V +M+ NI++ V
Sbjct: 1 MVLAQLGGSISRALAQMSNATVIDDKAFADCLHEIARALLQSDVQIRMVSDMRANIRRAV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NLD L AG NKRRIIQQA+F ELC MLDPGKPSFTP KGKPSV+MFVGLQGSGKTTTCTK
Sbjct: 61 NLDALPAGTNKRRIIQQAVFAELCNMLDPGKPSFTPTKGKPSVVMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YA+YHQ KG+KP+LVCADTFRAGAFDQLKQNATKAKIP+YGSY ESDPV+IAVEGVE F+
Sbjct: 121 YAHYHQLKGFKPSLVCADTFRAGAFDQLKQNATKAKIPYYGSYMESDPVKIAVEGVERFR 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KE DLIIVDTSGRHKQEAALFEEMRQV+EAT PDLVIFVMD SIGQAAFDQAQAFKQS
Sbjct: 181 KEKSDLIIVDTSGRHKQEAALFEEMRQVAEAT-KPDLVIFVMDGSIGQAAFDQAQAFKQS 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
SVGAVIVTK+DGHAKGGGALSAVAATKSPV+FIGTGEHM +FEVFDVKPFVSRLLGMGD
Sbjct: 240 ASVGAVIVTKLDGHAKGGGALSAVAATKSPVVFIGTGEHMQDFEVFDVKPFVSRLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
SG ++KI + +P DQQPEL+Q+L EG FTLR+ Y+ FQN+L MGPIGQV SM+PGF SE
Sbjct: 300 LSGLVNKIKDAMPADQQPELMQRLIEGTFTLRVFYDLFQNLLNMGPIGQVLSMIPGFRSE 359
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEML 420
LMPKG +KESQAKIKRYMT+MDSMTN ELDS+NPKLM++SRI R+ARGSGR +++V +ML
Sbjct: 360 LMPKGHDKESQAKIKRYMTIMDSMTNAELDSTNPKLMSESRIKRVARGSGRTMKDVTDML 419
Query: 421 EEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQIGGVGGLQNLMKQ 480
EEYKR+AK+ SK+K K+PK + + ++ ++ ++P+ +L QIGGV LQ++MKQ
Sbjct: 420 EEYKRIAKVCSKLKK-KLPKNMDRNVMNNKDTLNTINNLIPKQLLNQIGGVNPLQSVMKQ 478
Query: 481 MG 482
MG
Sbjct: 479 MG 480
>gi|1711514|sp|P49970.1|SR543_HORVU RecName: Full=Signal recognition particle 54 kDa protein 3;
Short=SRP54
gi|1020004|gb|AAA79356.1| signal recognition particle 54 kDa subunit [Hordeum vulgare]
Length = 493
Score = 743 bits (1917), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/494 (72%), Positives = 425/494 (86%), Gaps = 7/494 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA +GGSISRA+ MS+A ++DE VL ECLNEI RAL+Q+DV+FK V ++Q NI+K V
Sbjct: 1 MVLADVGGSISRALA-MSSAAVVDESVLRECLNEIARALMQSDVRFKTVCDLQANIRKTV 59
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NL+ LAAG NKRRII+ ++ ELCKMLD GKP+F PKKGKP+V+MFVGLQGSGKTTTCTK
Sbjct: 60 NLEALAAGTNKRRIIETSVGKELCKMLDTGKPAFVPKKGKPNVVMFVGLQGSGKTTTCTK 119
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YA+YHQ+KG+KP+LVCADTFRAGAFDQLKQNATKAKIPFYGSY ESDPV+IAVEG+E F+
Sbjct: 120 YAHYHQRKGFKPSLVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGLEKFR 179
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
+E DLII+DTSGRH QEAALFEEMRQV+EAT PDLVIFVMD SIGQAAFDQAQAFKQS
Sbjct: 180 QEKSDLIIIDTSGRHMQEAALFEEMRQVAEAT-KPDLVIFVMDGSIGQAAFDQAQAFKQS 238
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
SVGAVIVTK+DGHAKGGGALSAVAATKSPVIFIGTGEH+D+F+VF+V+PFV+RLLG GD
Sbjct: 239 ASVGAVIVTKLDGHAKGGGALSAVAATKSPVIFIGTGEHIDDFDVFNVEPFVARLLGRGD 298
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G +DK+ +VP DQQ EL+ KLSEG FTLR++YEQFQN+LKMGP+ Q+FSMLPGFSSE
Sbjct: 299 LPGLIDKMESIVPADQQSELVAKLSEGAFTLRLLYEQFQNLLKMGPMSQIFSMLPGFSSE 358
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEML 420
LMPKG+EK+S+ K KRYMT+MDSMT ELDS+NPKLM +SRI+R+ARGSGR+V++VMEML
Sbjct: 359 LMPKGQEKQSKEKFKRYMTIMDSMTPAELDSTNPKLMTESRIIRVARGSGRKVKDVMEML 418
Query: 421 EEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQIGGVGGLQNLMK 479
EEYKRLAK+WSK K IP+ G+MSA + Q M KV+P +++Q+GG GL+ L+K
Sbjct: 419 EEYKRLAKMWSKRNVSKLIPQNGKMSAQA----IQKMLKVMPPQVVQQMGGKSGLEALLK 474
Query: 480 QMGSTKDMMGMFGG 493
Q+G KD M G
Sbjct: 475 QLGGGKDTSKMLAG 488
>gi|413945975|gb|AFW78624.1| hypothetical protein ZEAMMB73_996048 [Zea mays]
Length = 482
Score = 735 bits (1897), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/482 (73%), Positives = 414/482 (85%), Gaps = 6/482 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LGGSI+RA+ +MSNAT++DEKVL +CLNEI RALLQADV+F VR+++ NI +IV
Sbjct: 1 MVLAELGGSIARALARMSNATVVDEKVLADCLNEICRALLQADVRFDTVRDVKANINRIV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NLD LAAG NKRRIIQQA+ +EL +MLDPGKPSFTP KGKP+V+MFVGLQGSGKTTTCTK
Sbjct: 61 NLDALAAGTNKRRIIQQAVVDELRRMLDPGKPSFTPSKGKPNVVMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YA YH++KG+ PALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPV+IAVEGV+ F
Sbjct: 121 YADYHRRKGFNPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVKIAVEGVDMFM 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KE DLIIVDTSGRHKQEAALFEEMRQVSEAT PDLVIFVMD SIGQAAFDQAQAFKQS
Sbjct: 181 KEKYDLIIVDTSGRHKQEAALFEEMRQVSEAT-KPDLVIFVMDGSIGQAAFDQAQAFKQS 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEH+ +FEVF+V PFVSRLLGMGD
Sbjct: 240 ASVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHIPDFEVFEVNPFVSRLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
SG ++KI E +P +QQ +++ KL EG FTLR++YE FQN+ ++GP+GQ+ SM+PGFS +
Sbjct: 300 LSGLVNKIQEFMPDNQQMQIMDKLGEGTFTLRLLYEMFQNLQRIGPLGQLVSMIPGFSGQ 359
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEML 420
+ KG EKE QAKIKRYMTMMDSMT+ ELD ++PKLMN SRI RIARGSGR+V EV+ ML
Sbjct: 360 FIEKGNEKEGQAKIKRYMTMMDSMTDAELDGTDPKLMNQSRINRIARGSGRRVEEVVHML 419
Query: 421 EEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQIGGVGGLQNLMKQ 480
+EYKR+AK+W K+ L ++ +M N + + +S +P ML Q+GG+ GLQN++KQ
Sbjct: 420 DEYKRIAKVWKKLPVLNNNRRSDM-----NRDIRRISDAIPPNMLTQLGGIAGLQNMIKQ 474
Query: 481 MG 482
MG
Sbjct: 475 MG 476
>gi|357455285|ref|XP_003597923.1| Signal recognition particle [Medicago truncatula]
gi|355486971|gb|AES68174.1| Signal recognition particle [Medicago truncatula]
Length = 512
Score = 735 bits (1897), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/536 (69%), Positives = 427/536 (79%), Gaps = 67/536 (12%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LGGSI+RA+ +M+N T+IDEK L +CLNEI RALLQ+DV+F+L+R+MQ NIK IV
Sbjct: 1 MVLAELGGSITRALHKMNNTTVIDEKALTDCLNEINRALLQSDVRFELIRDMQINIKNIV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQ---------- 110
NL+ LAAGHNKR+IIQQA+F+ELC+ML+PGKPSF PK+ K SV+MFVGLQ
Sbjct: 61 NLEQLAAGHNKRKIIQQAVFDELCRMLNPGKPSFVPKREKTSVVMFVGLQVPLDWCGFWF 120
Query: 111 -----------GSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPF 159
GSGKTTTCTKYA+ +QKKGWKPALVCADTFRAGAFDQLKQNATKAKIPF
Sbjct: 121 YLPAGCQIGVTGSGKTTTCTKYAHCYQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPF 180
Query: 160 YGS------------YTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
YGS Y ESDPV+IAVEGVE FK+E+ DLIIVDTSGRHKQEA+LFEEMRQ
Sbjct: 181 YGSNYYFAVPPFLNSYMESDPVKIAVEGVERFKEEDHDLIIVDTSGRHKQEASLFEEMRQ 240
Query: 208 VSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAAT 267
+SEAT PDLVIFVMDSSIGQAAF+QAQAFKQ V+VGAVI+TKMDGHAKGGG+LSAVAAT
Sbjct: 241 LSEAT-KPDLVIFVMDSSIGQAAFNQAQAFKQIVAVGAVIITKMDGHAKGGGSLSAVAAT 299
Query: 268 KSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEG 327
KSPVIFIGTGEHMD+FEVF+V+PFVSRLLGMGD SG +DKIH VVPMDQQ +L+QKLS+G
Sbjct: 300 KSPVIFIGTGEHMDQFEVFEVQPFVSRLLGMGDLSGLIDKIHGVVPMDQQADLVQKLSKG 359
Query: 328 NFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTN- 386
NFTLRIMYEQFQN LKMGP+G++ SM+PGFSSEL+P+G E ES AK+K YMTMMDSMTN
Sbjct: 360 NFTLRIMYEQFQNALKMGPMGELVSMIPGFSSELIPQGHENESSAKLKHYMTMMDSMTNE 419
Query: 387 --------EELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLKI 438
E+LDSSNPKL+N+SR+MRIARGSGR VREV+E++E YKR+AK
Sbjct: 420 GMHNELIVEDLDSSNPKLINESRMMRIARGSGRLVREVLELMEVYKRIAK---------- 469
Query: 439 PKKGEMSALSRNMNAQHMSKVLPQGMLKQIGGVGGLQNLMKQMGSTKDMMGMFGGG 494
E S +SR N Q M K P +LKQ GGV GLQ DMMGMFGGG
Sbjct: 470 ----EFSKISRCRNPQDMVKSFPPHLLKQFGGVKGLQ----------DMMGMFGGG 511
>gi|242091039|ref|XP_002441352.1| hypothetical protein SORBIDRAFT_09g025050 [Sorghum bicolor]
gi|241946637|gb|EES19782.1| hypothetical protein SORBIDRAFT_09g025050 [Sorghum bicolor]
Length = 482
Score = 734 bits (1895), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/485 (73%), Positives = 415/485 (85%), Gaps = 8/485 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LGGSI+RA+ +MSNAT++DEKVL +CLNEI RALLQADV+F+ VR+++ NIK++V
Sbjct: 1 MVLAELGGSIARALSRMSNATVVDEKVLADCLNEICRALLQADVRFETVRDVKANIKRVV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NLD LAAG NKRRIIQQA+ +E+ +MLDPGKPSFTP KGKP+++MFVGLQGSGKTTTCTK
Sbjct: 61 NLDALAAGTNKRRIIQQAVVDEIRRMLDPGKPSFTPSKGKPNLVMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YA YH++KG+ PALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPV+IAVEGV+ F+
Sbjct: 121 YADYHRRKGFNPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVKIAVEGVDMFR 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KE CDLIIVDTSGRHKQEAALFEEMRQVSEAT PDLVIFVMD SIGQAAFDQAQAFKQS
Sbjct: 181 KEKCDLIIVDTSGRHKQEAALFEEMRQVSEAT-KPDLVIFVMDGSIGQAAFDQAQAFKQS 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEH+ +FEVF+V PFVSRLLGMGD
Sbjct: 240 ASVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHILDFEVFEVNPFVSRLLGMGD 299
Query: 301 WSGFMDKIHEVV-PMDQQPELL-QKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFS 358
SG ++KIHEV+ P +Q P ++ +L EG FTLR++YE FQ + MGP+GQV SM+PGFS
Sbjct: 300 LSGLVNKIHEVIMPNNQPPNIIGPQLVEGTFTLRLLYEMFQTLQSMGPLGQVVSMIPGFS 359
Query: 359 SELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVME 418
++ + KG EKE QAKIKRYMTMMDSMT+ ELD +NPKLMN SRI RIARGSGR V EV+
Sbjct: 360 AQFIEKGNEKEGQAKIKRYMTMMDSMTDAELDGTNPKLMNQSRINRIARGSGRLVEEVVH 419
Query: 419 MLEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQIGGVGGLQNLM 478
MLEEYKR+AK+W K+ P L+ N + + ++ +P ML Q+GG GLQN+M
Sbjct: 420 MLEEYKRIAKMWKKL-----PLPTNNRRLNTNRDIRPIANAIPPNMLNQLGGFVGLQNMM 474
Query: 479 KQMGS 483
KQMG+
Sbjct: 475 KQMGA 479
>gi|449522379|ref|XP_004168204.1| PREDICTED: signal recognition particle 54 kDa protein 2-like
[Cucumis sativus]
Length = 392
Score = 694 bits (1792), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/351 (94%), Positives = 344/351 (98%), Gaps = 1/351 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLAQLGGSISRA+QQMS+AT+IDEKVLNECLNEITRALLQ+DVQFKLVR+MQTNIKKIV
Sbjct: 1 MVLAQLGGSISRALQQMSSATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NLDDLAAGHNKR+IIQQA+FNELCKMLDPGKPSFTPKKGK SV+MFVGLQGSGKTTTCTK
Sbjct: 61 NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSVVMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSY ESDPV+IAVEGVE FK
Sbjct: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KE+CDLIIVDTSGRHKQEAALFEEMRQVSEAT PDLVIFVMDSSIGQAAFDQAQAFKQS
Sbjct: 181 KESCDLIIVDTSGRHKQEAALFEEMRQVSEAT-KPDLVIFVMDSSIGQAAFDQAQAFKQS 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V+VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD
Sbjct: 240 VAVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVF 351
WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMY+QFQN+LKMGPI QV
Sbjct: 300 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYDQFQNLLKMGPINQVL 350
>gi|297849956|ref|XP_002892859.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297338701|gb|EFH69118.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 444
Score = 692 bits (1787), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/472 (74%), Positives = 394/472 (83%), Gaps = 33/472 (6%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
+N+CLNEITRALLQ+DV F LV+EMQTNIKKIVNLDDLAAGHNKR II+Q
Sbjct: 1 MNDCLNEITRALLQSDVSFPLVKEMQTNIKKIVNLDDLAAGHNKRLIIEQ---------- 50
Query: 88 DPGKPSFTPKKGKPS-VIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFD 146
+P F PKK KPS V+MFVGLQG+GKTTTCTKYAYYHQKKG+K ALVCADTFRAG FD
Sbjct: 51 -DERPVFAPKKAKPSSVVMFVGLQGAGKTTTCTKYAYYHQKKGYKTALVCADTFRAGVFD 109
Query: 147 QLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMR 206
QLKQNATKAKIPFYGSYTESDPV+IA EGV+ FKKE CDLIIVDTSGRHKQEA+L EE+
Sbjct: 110 QLKQNATKAKIPFYGSYTESDPVKIAAEGVDRFKKEKCDLIIVDTSGRHKQEASLCEEIL 169
Query: 207 QVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAA 266
QV+EAT PDLVIFVMDSSIGQAAFDQAQAFKQ+VSVGAVI+TKMDGHAKGGGALSAVAA
Sbjct: 170 QVAEAT-EPDLVIFVMDSSIGQAAFDQAQAFKQTVSVGAVIITKMDGHAKGGGALSAVAA 228
Query: 267 TKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSE 326
TKSPVIFIGTGEHMDEFEVFDVKPFVSRLLG GDWSG +DK+ EVVP D Q EL++ LS+
Sbjct: 229 TKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGKGDWSGLVDKLQEVVPKDLQHELVENLSQ 288
Query: 327 GNFTLRIMYEQFQNILKMGPIGQV---FSMLPGFSSELMPKGREKESQAKIKRYMTMMDS 383
GNFTLR MY+QFQ L++ P+ QV S++ +ELMPKG ES+A KRYMTMMDS
Sbjct: 289 GNFTLRTMYDQFQCSLQI-PLNQVRISCSIVACTIAELMPKGHGDESRA--KRYMTMMDS 345
Query: 384 MTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLKIPKKGE 443
MTN+ELDSSN K+ N+SRIMRIARGSGR VREVME+LEEYKR+AK MKG+KIPK G+
Sbjct: 346 MTNKELDSSNTKVFNESRIMRIARGSGRLVREVMELLEEYKRIAKT---MKGIKIPKNGD 402
Query: 444 MSALSRNMNAQHMSKVLPQGMLKQIGGVGGLQNLMKQMGSTKDMMGMFGGGE 495
MS +KV+P MLKQ+GG+ GLQ+LMKQMGS KDMMGMF GG+
Sbjct: 403 MS-----------NKVIPPQMLKQMGGMSGLQSLMKQMGSAKDMMGMFSGGD 443
>gi|303291107|ref|XP_003064840.1| type II secretory pathway family protein [Micromonas pusilla
CCMP1545]
gi|226453866|gb|EEH51174.1| type II secretory pathway family protein [Micromonas pusilla
CCMP1545]
Length = 513
Score = 654 bits (1688), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 312/496 (62%), Positives = 400/496 (80%), Gaps = 20/496 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL +LG +++ A++++ T++DE+++ CL E+TRALLQADV + V+ NI K V
Sbjct: 1 MVLGELGTALAGALKKLGEHTVVDEEIMEACLKEVTRALLQADVNVQYVK----NIVKRV 56
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLD-------------PGKPSFTPKKGKPSVIMFV 107
N+++LAAG N R+++++A+F EL ML+ + + PKKG P+V+MFV
Sbjct: 57 NINELAAGLNARKLLEKAVFTELVNMLEGEGAQNAQNEGVTTKREKYAPKKGVPNVVMFV 116
Query: 108 GLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESD 167
GLQG GKTTTCTKYA+++QKKG+KPALVCADTFRAGAFDQLKQNATKA+IPFYGSYTE+D
Sbjct: 117 GLQGCGKTTTCTKYAHHYQKKGFKPALVCADTFRAGAFDQLKQNATKARIPFYGSYTETD 176
Query: 168 PVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIG 227
P +IA +GVE FK E DLIIVDTSGRHKQE+ALFEEMR V+EA VNPD+ IFVMDSSIG
Sbjct: 177 PAKIASDGVERFKAEKNDLIIVDTSGRHKQESALFEEMRAVAEA-VNPDMTIFVMDSSIG 235
Query: 228 QAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFD 287
QAA DQA AFK +V VG+V+VTK+DGHAKGGGA+SAVAAT++P++FIGTGEH+DEFE FD
Sbjct: 236 QAASDQAAAFKNTVDVGSVVVTKLDGHAKGGGAISAVAATRAPIVFIGTGEHIDEFEAFD 295
Query: 288 VKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPI 347
KPFVSRLLG+GDW+GF+DKI +V+P DQQPELL KL++G FT+RI+YEQF NI KMGP+
Sbjct: 296 AKPFVSRLLGLGDWTGFIDKIADVIPADQQPELLDKLAQGQFTMRILYEQFANIQKMGPM 355
Query: 348 GQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIA 406
V SM+PGF +++MPKG+EK+SQAKIKR M MMDSMT+EELD+++ KL+ D R+ RI
Sbjct: 356 SAVMSMIPGFGNDVMPKGQEKQSQAKIKRMMCMMDSMTDEELDTTSLKLLQDPKRMERIG 415
Query: 407 RGSGRQVREVMEMLEEYKRLAKIWSKMKGLKIPKKGEMS-ALSRNMNAQHMSKVLPQGML 465
RG+GR +V+E++EEYKRLAK+ KMKGLK PKKG + + N N M++ +P GML
Sbjct: 416 RGAGRSPMDVVELIEEYKRLAKMMGKMKGLKAPKKGGYGQSQALNQNLAQMAQAIPPGML 475
Query: 466 KQIGGVGGLQNLMKQM 481
KQ+GG+G LQ +MKQ+
Sbjct: 476 KQMGGMGALQGMMKQL 491
>gi|307105722|gb|EFN53970.1| hypothetical protein CHLNCDRAFT_31879 [Chlorella variabilis]
Length = 490
Score = 637 bits (1643), Expect = e-180, Method: Compositional matrix adjust.
Identities = 316/487 (64%), Positives = 394/487 (80%), Gaps = 7/487 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LG IS+A+ ++ ++DE VL+ CL EI ALLQADV +LV ++ N+KK V
Sbjct: 1 MVLAELGQRISQALGSLNAVPVVDEAVLDACLKEIATALLQADVNVRLVANLRNNVKKRV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTP-KKGKPSVIMFVGLQGSGKTTTCT 119
N++ LA+G NK+++I++A+F+ELC MLD G P T KKGK +++MFVGLQG+GKTTTCT
Sbjct: 61 NMEQLASGLNKQKVIEKAVFDELCSMLDGGDPKKTELKKGKTNIVMFVGLQGAGKTTTCT 120
Query: 120 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
KYA+ +KKG+KPA+VCADTFRAGAFDQLKQNATKA+IPFYGSYTE+DP IA +GV+ F
Sbjct: 121 KYAFLWKKKGFKPAMVCADTFRAGAFDQLKQNATKAQIPFYGSYTETDPAIIAQQGVDRF 180
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQ 239
KKE DLIIVDTSGRHKQE ALFEEMRQV+ A VNP VIFVMD SIGQAAFDQA+AF +
Sbjct: 181 KKEGRDLIIVDTSGRHKQEEALFEEMRQVA-AAVNPQHVIFVMDGSIGQAAFDQAKAFHE 239
Query: 240 SVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMG 299
SV VG VI+TK+DGHAKGGGALSAVAAT+SP+ FIGTGEHM EFE F+ + FV RLLG G
Sbjct: 240 SVDVGQVIITKLDGHAKGGGALSAVAATRSPITFIGTGEHMHEFESFETQKFVGRLLGRG 299
Query: 300 DWSGFMDKIHEVVP-MDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFS 358
DW F+DK+ +V+P D Q EL+ K+S+G FTLRIMYEQF NI+KMGP+GQV SM+PGFS
Sbjct: 300 DWGSFIDKVKDVIPEEDAQQELIDKISKGEFTLRIMYEQFANIMKMGPMGQVMSMIPGFS 359
Query: 359 SELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVM 417
+ LM G EKESQAKIKRYMT+MDSMT +ELDSS+ KL+ + SRI+R ARGSG V++V+
Sbjct: 360 NALMQPGSEKESQAKIKRYMTIMDSMTEKELDSSSTKLLGEQSRILRWARGSGSSVQDVL 419
Query: 418 EMLEEYKRLAKIWSK-MKGLKIPK--KGEMSALSRNMNAQHMSKVLPQGMLKQIGGVGGL 474
+LEEYKRLAK++S MKG+K+PK KG+++ + N MS++LP MLK +GG +
Sbjct: 420 LLLEEYKRLAKVFSTAMKGMKLPKNMKGDINPRNMQQNIAQMSRMLPPHMLKMMGGPAAI 479
Query: 475 QNLMKQM 481
Q+L+KQM
Sbjct: 480 QSLIKQM 486
>gi|255082746|ref|XP_002504359.1| type II secretory pathway family [Micromonas sp. RCC299]
gi|226519627|gb|ACO65617.1| type II secretory pathway family [Micromonas sp. RCC299]
Length = 512
Score = 625 bits (1611), Expect = e-176, Method: Compositional matrix adjust.
Identities = 315/495 (63%), Positives = 402/495 (81%), Gaps = 13/495 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL +LG +++ A++++ T++DE+V++ CL E+T+ALLQADV + V +M+ NI K V
Sbjct: 1 MVLGELGSALAGALRKLGEHTVVDEEVMDACLKEVTKALLQADVNVQYVVQMKKNIVKQV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPG----KPSFTPKKGKPSVIMFVGLQGSGKTT 116
N+ +LAAG N R+++++A+FNEL ML+ G K F PKKGKP+V+MFVGLQG GKTT
Sbjct: 61 NIQELAAGLNARKLLEKAVFNELVNMLEGGGAEVKEKFVPKKGKPNVVMFVGLQGCGKTT 120
Query: 117 TCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGV 176
TCTKYAY+ QKKG+KPALVCADTFRAGAFDQLKQNATKA+IPFYGSYTE+DP +IA +GV
Sbjct: 121 TCTKYAYHFQKKGYKPALVCADTFRAGAFDQLKQNATKARIPFYGSYTETDPAKIAADGV 180
Query: 177 ETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQA 236
E FK E DLIIVDTSGRHKQE +LFEEMRQV+ A V PD+ IFVMDSSIGQAA DQA+A
Sbjct: 181 ERFKDEKNDLIIVDTSGRHKQEDSLFEEMRQVA-AAVQPDMTIFVMDSSIGQAAQDQARA 239
Query: 237 FKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLL 296
FK +V VG+VI+TK+DGHAKGGGA+SAVAATKSP+ FIGTGEH+DEFE FD KPFVSRLL
Sbjct: 240 FKATVDVGSVIITKLDGHAKGGGAISAVAATKSPIAFIGTGEHIDEFEAFDTKPFVSRLL 299
Query: 297 GMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPG 356
G+GDW+G +DKI++V+PMDQQPEL+ KL G FT+RI+YEQF NI KMGP+ V SM+PG
Sbjct: 300 GLGDWTGLIDKINDVIPMDQQPELMDKLVAGQFTMRILYEQFANIQKMGPMSSVMSMIPG 359
Query: 357 FSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVRE 415
++PKG+EK SQAKIKR M +MDSMT+EELD+++ K++ D R+ RI RG+GR +
Sbjct: 360 MDG-MLPKGQEKASQAKIKRMMCLMDSMTDEELDTTSLKILQDPKRMERIGRGAGRGPGD 418
Query: 416 VMEMLEEYKRLAKIWSKMKGLKIPKK---GEMSALSRNMNAQHMSKVLPQGMLKQIGGVG 472
V+E++EEYKR++K+ KMKG+K+PKK G A+++NM Q M+ +P MLKQ+G +
Sbjct: 419 VVELVEEYKRMSKMMGKMKGMKMPKKGGYGHSQAMAQNM--QQMAGAIPPHMLKQMGSMA 476
Query: 473 GLQNLMKQMGSTKDM 487
GLQN+MKQ+ KDM
Sbjct: 477 GLQNMMKQL-EGKDM 490
>gi|428185212|gb|EKX54065.1| hypothetical protein GUITHDRAFT_159167 [Guillardia theta CCMP2712]
Length = 494
Score = 623 bits (1606), Expect = e-176, Method: Compositional matrix adjust.
Identities = 310/484 (64%), Positives = 394/484 (81%), Gaps = 6/484 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LGG I++A++ M++ T+IDE+ ++ L EI+ ALL +DV KLV ++ N+K +
Sbjct: 1 MVLAELGGRIAQAMRSMTSKTVIDEEAVDNMLKEISSALLSSDVNVKLVSSLRKNVKNRI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NL+DLA G N+RR+IQQA+F ELC+ML+PGK + PKKGKP+VIMFVGLQGSGKTT+CTK
Sbjct: 61 NLEDLATGLNRRRMIQQAVFEELCEMLNPGKKPYQPKKGKPNVIMFVGLQGSGKTTSCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YA ++Q+K WK LVC+DTFRAGAFDQLKQNATKA+IPFYGSYTE DPV+IA +GVE FK
Sbjct: 121 YALHYQRKSWKTCLVCSDTFRAGAFDQLKQNATKARIPFYGSYTERDPVKIARDGVEMFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KE ++IIVDTSGRHKQEA+LFEEM+Q++ A V PD ++FV+DSSIGQAA DQA AFK++
Sbjct: 181 KEGQEIIIVDTSGRHKQEASLFEEMQQIA-AAVEPDDIVFVLDSSIGQAAHDQATAFKEA 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
VSVG+VI+TK+DGHAKGGGALSAVAAT SP++FIGTGEH D+FE F+V+ FVSRLLG+GD
Sbjct: 240 VSVGSVIMTKLDGHAKGGGALSAVAATSSPIVFIGTGEHFDDFETFEVRSFVSRLLGLGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G M+ I + +D+QPEL QKLS+G FTLR MYEQFQN++KMGPIG+V SM+PG S+
Sbjct: 300 VGGLMNAIKD-AGLDKQPELYQKLSQGVFTLRDMYEQFQNVMKMGPIGKVMSMIPGMSA- 357
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMNDSRIMRIARGSGRQVREVMEM 419
LM KGRE ESQ + K++MT+MDSMT++ELD+ N K+ D+R+ RIA+GSG ++V E+
Sbjct: 358 LMTKGREHESQERFKKFMTIMDSMTDDELDTENVNKIFTDTRVFRIAQGSGSHPQQVWEL 417
Query: 420 LEEYKRLAKIWSKMKGLKIPKKGEMSALSRN--MNAQHMSKVLPQGMLKQIGGVGGLQNL 477
+EE+KR K+ +KMK LKI K GEM ++RN Q M K L MLKQIGG+ GLQNL
Sbjct: 418 IEEFKRFQKMIAKMKHLKIGKNGEMPQMTRNPQQAMQQMGKCLDPRMLKQIGGMSGLQNL 477
Query: 478 MKQM 481
MK M
Sbjct: 478 MKSM 481
>gi|390352988|ref|XP_780650.3| PREDICTED: signal recognition particle 54 kDa protein-like
[Strongylocentrotus purpuratus]
Length = 513
Score = 612 bits (1577), Expect = e-172, Method: Compositional matrix adjust.
Identities = 302/491 (61%), Positives = 383/491 (78%), Gaps = 13/491 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNATIIDE VLN LNEI RALL+ADV +LV+ ++ N+K ++
Sbjct: 1 MVLADLGRKITSALKSLSNATIIDEDVLNSMLNEICRALLEADVNIRLVKALKENVKSVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ D++AAG NKR++IQ A+F EL K++DPG +TP K KP++IMFVGLQGSGKTTTCTK
Sbjct: 61 DFDEMAAGLNKRKMIQTAVFKELVKLVDPGVKVWTPTKAKPNIIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY+QKKGWK AL+CADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA +GVE FK
Sbjct: 121 LAYYYQKKGWKVALICADTFRAGAFDQLKQNATKARIPFYGSYTEVDPVIIAADGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KEN ++IIVDTSGRHKQE +LFEEM QV+ T +PD +IFVMD+SIGQA QA+AFK+
Sbjct: 181 KENFEIIIVDTSGRHKQEDSLFEEMLQVANVT-SPDNIIFVMDASIGQACESQAKAFKEK 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V V +VI+TK+DGHAKGGGALSAVAATKSPVIFIGTGEH+D+FE F KPF+S+LLGMGD
Sbjct: 240 VDVASVIITKLDGHAKGGGALSAVAATKSPVIFIGTGEHIDDFEPFKTKPFISKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G +DK+ E + +D EL+ KL G FTLR MYEQFQNI+KMGP GQ+ M+PGFSS+
Sbjct: 300 IEGLIDKVSE-LNLDDNEELINKLKHGEFTLRDMYEQFQNIMKMGPFGQIMGMIPGFSSD 358
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDS-SNPKLM--NDSRIMRIARGSGRQVREVM 417
M KG E+ES A++K+ MTMMDSM +EELDS KL R+ R+ARGSG VREV
Sbjct: 359 FMTKGNEQESMARLKKLMTMMDSMKDEELDSREGAKLFMRCPGRVQRVARGSGVSVREVQ 418
Query: 418 EMLEEYKRLAKIWSKMKGLKIPKKGEMSA-LSRNMNAQHMSKV-------LPQGMLKQIG 469
E+L++Y++ A++ KM G+K KG+ +S+N+N M+K+ + +L+Q+G
Sbjct: 419 ELLQQYQKFAQMVKKMGGIKGLFKGKSGGDMSKNVNPAQMAKINQSIARAMDPRVLQQLG 478
Query: 470 GVGGLQNLMKQ 480
G+ GLQ++M+Q
Sbjct: 479 GMNGLQSMMRQ 489
>gi|405977168|gb|EKC41631.1| Signal recognition particle 54 kDa protein [Crassostrea gigas]
Length = 504
Score = 599 bits (1544), Expect = e-168, Method: Compositional matrix adjust.
Identities = 297/505 (58%), Positives = 389/505 (77%), Gaps = 18/505 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ + NATII+E+VLNE L EI +AL++ADV KLV+ ++ N++ ++
Sbjct: 1 MVLADLGRKITSALRSLGNATIINEEVLNEMLKEICKALIEADVNIKLVKSLRENVRSVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ D++A G NKRR+IQ A+F EL K++DPG ++TP KGK +VIMFVGLQGSGKTTTCTK
Sbjct: 61 DFDEMAGGLNKRRMIQSAVFKELVKLIDPGVKAWTPTKGKNNVIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY+QKKGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGVE F+
Sbjct: 121 LAYYYQKKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEIDPVVIAQEGVEKFR 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
EN ++IIVDTSGRHKQE +LFEEM QV+ T NPD ++FVMD+SIGQA QA+AFK
Sbjct: 181 SENFEIIIVDTSGRHKQEDSLFEEMLQVNNVT-NPDNIVFVMDASIGQACESQAKAFKDK 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V +G+VI+TK+DGHAKGGGALSAVAATKSPVIFIGTGEH D+FE F V+PFVS+LLGMGD
Sbjct: 240 VDIGSVIITKLDGHAKGGGALSAVAATKSPVIFIGTGEHTDDFEPFKVQPFVSKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G +DK++E + +D +L++KL +G FTLR MYEQFQNI+KMGP Q+ M+PGFSS+
Sbjct: 300 IEGLIDKVNE-LKLDDNEDLMKKLKQGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFSSD 358
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLM---NDSRIMRIARGSGRQVREVM 417
+ KG E+ES A++K+ MT+MDSM ++ELDS + + + RI R+ARG+G +REV
Sbjct: 359 FLTKGGEQESMARLKKLMTIMDSMNDKELDSLDGERLFTRQTGRIQRVARGAGVSIREVN 418
Query: 418 EMLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNA-------QHMSKVLPQGMLKQIG 469
E+L +YK+ A++ KM G+K + K G+M S+N+N Q M+K++ +L+Q+G
Sbjct: 419 ELLAQYKKFAQMVKKMGGIKGLFKGGDM---SKNVNPSQMAKLNQQMAKMMDPRVLQQMG 475
Query: 470 GVGGLQNLMKQM--GSTKDMMGMFG 492
G+ GLQ +M+Q G+ MFG
Sbjct: 476 GMQGLQGMMRQFQQGAAGKFGNMFG 500
>gi|452824083|gb|EME31088.1| signal recognition particle subunit SRP54 [Galdieria sulphuraria]
Length = 482
Score = 597 bits (1540), Expect = e-168, Method: Compositional matrix adjust.
Identities = 283/484 (58%), Positives = 392/484 (80%), Gaps = 7/484 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL++LG IS A+++++N T++DE+ LNE LNE++RALL+ADV K+V+ ++ ++KK V
Sbjct: 1 MVLSELGKKISGALRKLANRTVVDEEALNEMLNEVSRALLEADVNVKMVQALRQSVKKKV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NL++LAAG N+R++IQ+A+F ELC ML PG KKG+P+V+MFVGLQG+GKTTTC K
Sbjct: 61 NLEELAAGVNRRKLIQKAVFEELCNMLSPGTSPPPLKKGRPNVVMFVGLQGNGKTTTCVK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YAYYHQ+KGWK ALVCADTFRAGAFDQLKQ+ATKA++PFYGS+TE+D V++A EGV+ F+
Sbjct: 121 YAYYHQRKGWKTALVCADTFRAGAFDQLKQSATKARVPFYGSHTETDAVKVAREGVDLFR 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KE +LIIVDTSGRHKQ+ ALFEEM Q+++A V P+ +IFVMD ++GQ+ +DQA AF+Q
Sbjct: 181 KEKYELIIVDTSGRHKQDTALFEEMEQIAQA-VQPNSIIFVMDGTMGQSVYDQALAFRQR 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V+VG+V+VTK+DGHAKGGGALSAV+ATKSPV+FIGTGE +D+ E F + FV RLLG+GD
Sbjct: 240 VNVGSVVVTKLDGHAKGGGALSAVSATKSPVVFIGTGEMLDDLEPFAPQSFVQRLLGLGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
SGF++ + E +DQ P++L+++ EG TLR +Y+QFQ++LKMGP+G+V SM PG +
Sbjct: 300 ISGFVNAVKE-AGVDQNPDILKRIQEGVLTLRDLYDQFQSVLKMGPMGKVLSMFPGM-QD 357
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKL-MNDSRIMRIARGSGRQVREVMEM 419
L+PKG+E+E ++K+++++M+SMT++ELD NPK+ N SR++RI RGSGR V++V ++
Sbjct: 358 LIPKGKEREGTLRVKKFLSIMNSMTDDELD--NPKVQFNQSRMIRIGRGSGRDVKDVEDL 415
Query: 420 LEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQIGGVGGLQNLMK 479
L EYKRL+K+ S++ K K G+ S L RNM Q +S+++ ML+Q+GG GLQNLMK
Sbjct: 416 LAEYKRLSKLVSRVGKNKALKTGDFSQLQRNM-PQQLSRMMDPKMLQQMGGASGLQNLMK 474
Query: 480 QMGS 483
Q S
Sbjct: 475 QFSS 478
>gi|302835417|ref|XP_002949270.1| hypothetical protein VOLCADRAFT_74111 [Volvox carteri f.
nagariensis]
gi|300265572|gb|EFJ49763.1| hypothetical protein VOLCADRAFT_74111 [Volvox carteri f.
nagariensis]
Length = 505
Score = 596 bits (1536), Expect = e-168, Method: Compositional matrix adjust.
Identities = 297/492 (60%), Positives = 388/492 (78%), Gaps = 14/492 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LG IS+AI M A IIDEKVL+ L EI ALLQADV K V ++ +KK V
Sbjct: 1 MVLAELGTRISKAISSMGQAMIIDEKVLDTVLKEICTALLQADVNVKQVANLRNGVKKRV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLD----PGKPSFTPKKGKPSVIMFVGLQGSGKTT 116
N+ +LAAG NK+R+I++A+F+ELC MLD P K +KGK +MFVGLQGSGKTT
Sbjct: 61 NIAELAAGLNKQRVIEKAVFDELCDMLDSGVDPKKLELKKEKGKQHTVMFVGLQGSGKTT 120
Query: 117 TCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGV 176
TCTKYAY+++KKGWKPALVCADT+RAGAFDQLKQNATKA+IPFYGSY E+DP IA +GV
Sbjct: 121 TCTKYAYFYKKKGWKPALVCADTYRAGAFDQLKQNATKAQIPFYGSYKETDPAAIAQQGV 180
Query: 177 ETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQA 236
FK++ DLIIVDTSGRHKQEAALFEEM+QV+ A V+PDL+IFVMD SIGQAAFDQA+A
Sbjct: 181 LRFKEDGRDLIIVDTSGRHKQEAALFEEMKQVA-AAVSPDLIIFVMDGSIGQAAFDQAKA 239
Query: 237 FKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLL 296
FK++V VGAVI+TK+DGHAKGGGALSAVAATKSP+IF+GTGEHMD+FE F+ K FV RLL
Sbjct: 240 FKEAVEVGAVIITKLDGHAKGGGALSAVAATKSPIIFLGTGEHMDQFESFETKRFVQRLL 299
Query: 297 GMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPG 356
G GD SG MDKI +V+P D+QPELL +S+GN T+ ++ + F+++L++GP+ Q+ SMLPG
Sbjct: 300 GKGDVSGLMDKIQDVIPEDKQPELLDTISKGNVTMSVLKDMFESVLELGPMSQMMSMLPG 359
Query: 357 FSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVRE 415
F+S+L+PKG +K+SQ I+RY+T+++SMT++E++++N K++ + SR+ R+ARGSG ++
Sbjct: 360 FNSDLLPKGNDKQSQMMIRRYITIIESMTDKEMNTTNIKILQEPSRVNRLARGSGSTPQQ 419
Query: 416 VMEMLEEYKRLAKIWSK-MKGLKIPK-----KGEMSALSRNMNAQ--HMSKVLPQGMLKQ 467
V+ +LE YK +K ++ +K +PK KG++ R M MS+ LP +L+Q
Sbjct: 420 VLALLESYKHYSKYATQALKAANLPKNLKSMKGDVQMNPRQMQQALGKMSRALPPQLLQQ 479
Query: 468 IGGVGGLQNLMK 479
+GGVGGLQ+LMK
Sbjct: 480 LGGVGGLQSLMK 491
>gi|45360609|ref|NP_988977.1| signal recognition particle 54kDa [Xenopus (Silurana) tropicalis]
gi|38174419|gb|AAH61368.1| signal recognition particle 54 [Xenopus (Silurana) tropicalis]
Length = 504
Score = 595 bits (1535), Expect = e-167, Method: Compositional matrix adjust.
Identities = 293/505 (58%), Positives = 389/505 (77%), Gaps = 18/505 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNATII+E+VLN L E+ +ALL+ADV KLV++++ N+K +
Sbjct: 1 MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCKALLEADVNIKLVKQLRENVKSAI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+L+++A+G NKR++IQ A+F EL K++DPG ++TP KGKP+VIMFVGLQGSGKTTTCTK
Sbjct: 61 DLEEMASGLNKRKMIQHAVFKELVKLVDPGVKAWTPTKGKPNVIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY+Q+KGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGVE FK
Sbjct: 121 LAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVNIAYEGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
EN +++IVDTSGRHKQE +LFEEM QVS A V PD +++VMD+SIGQA QA+AFK
Sbjct: 181 NENFEIVIVDTSGRHKQEDSLFEEMLQVSNA-VQPDNIVYVMDASIGQACEAQAKAFKDK 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V V +VIVTK+DGHAKGGGALSAVAATKSP+IFIGTGEH+D+FE F +PF+S+LLGMGD
Sbjct: 240 VDVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G +DK++E + +D L++KL G FTLR MYEQFQNI+KMGP Q+ M+PGF +
Sbjct: 300 IEGLIDKVNE-LKLDDNEALIEKLKHGQFTLRDMYEQFQNIMKMGPFSQILGMIPGFGQD 358
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQVREVM 417
M KG E+ES A++K+ MT+MDSM ++ELD+++ KL + R+ R+ARGSG R+V
Sbjct: 359 FMSKGNEQESMARLKKLMTIMDSMNDQELDNTDGAKLFSKQPGRVQRVARGSGVSTRDVQ 418
Query: 418 EMLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNA-------QHMSKVLPQGMLKQIG 469
E+L +Y + A++ KM G+K + K G+M S+N+N Q M+K++ +L+ +G
Sbjct: 419 ELLAQYTKFAQMVKKMGGIKGLFKGGDM---SKNVNPSQMAKLNQQMAKMMDPRVLQHMG 475
Query: 470 GVGGLQNLMKQM--GSTKDMMGMFG 492
G+ GLQ++M+Q G+ +M GM G
Sbjct: 476 GMAGLQSMMRQFQQGAAGNMKGMMG 500
>gi|156407984|ref|XP_001641637.1| predicted protein [Nematostella vectensis]
gi|156228776|gb|EDO49574.1| predicted protein [Nematostella vectensis]
Length = 498
Score = 595 bits (1534), Expect = e-167, Method: Compositional matrix adjust.
Identities = 292/491 (59%), Positives = 384/491 (78%), Gaps = 16/491 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNAT+I+E+VLN L E+ ALL++DV +LV+ ++ N+K +
Sbjct: 1 MVLADLGRKITTALRSLSNATVINEEVLNAMLKEVCAALLESDVNVQLVKRLRENVKAAI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ +++AAG NKR++IQ +F ELCK++DPG ++TP KGK +VIMFVGLQGSGKTTTC+K
Sbjct: 61 DFEEMAAGLNKRKMIQHTVFQELCKLVDPGVKAWTPSKGKKNVIMFVGLQGSGKTTTCSK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY+Q+KGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSYTE+DPV IA EGVE FK
Sbjct: 121 LAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTETDPVIIAQEGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
+EN ++IIVDTSGRHKQE +LFEEM QVS A V+PD +IFVMD++IGQA Q++AFK+
Sbjct: 181 EENFEIIIVDTSGRHKQEESLFEEMLQVSNA-VSPDNIIFVMDATIGQACESQSRAFKEK 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V V +VIVTK+DGHAKGGGALSAVAATKSP+IFIGTGEH+D+FE F +PF+S+LLGMGD
Sbjct: 240 VDVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEQFKTRPFISKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G +DK++E + ++ EL+ KL G F+LR MYEQFQNI+KMGP GQ+ M+PGFSS+
Sbjct: 300 IEGLIDKVNE-LKLEDNEELIDKLKHGVFSLRDMYEQFQNIMKMGPFGQIMGMIPGFSSD 358
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQVREVM 417
+ KG E+ES A++KR MT+MDSM ++ELDS N KL R R+ARGSG VREV
Sbjct: 359 FLSKGNEQESMARLKRLMTIMDSMNDQELDSPNGAKLFTRQPGRTTRVARGSGVSVREVQ 418
Query: 418 EMLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQ-------GMLKQIG 469
E+L +Y++ A++ KM G+K + K G+M +RN+N M+K+ Q +L+Q+G
Sbjct: 419 ELLSQYQKFAQMVKKMGGIKGLFKGGDM---TRNVNPTQMTKLNHQMAKMMDPRVLQQMG 475
Query: 470 GVGGLQNLMKQ 480
G+ GLQN+M+Q
Sbjct: 476 GMSGLQNMMRQ 486
>gi|320167917|gb|EFW44816.1| signal recognition particle containing protein [Capsaspora
owczarzaki ATCC 30864]
Length = 512
Score = 595 bits (1533), Expect = e-167, Method: Compositional matrix adjust.
Identities = 295/490 (60%), Positives = 383/490 (78%), Gaps = 10/490 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ M+ + +IDE+VL+ L EI ALL+ADV KLV +++T++K V
Sbjct: 1 MVLADLGRKITGALRNMTASAVIDEEVLDAMLKEICTALLEADVNVKLVMKLRTSVKAAV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N D++AAG NK+R+IQ+A+++ELC+++DPG + P KGKP+VIMFVGLQGSGKTTTCTK
Sbjct: 61 NFDEMAAGLNKKRVIQKAVYDELCRLVDPGIAPYKPVKGKPNVIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY+ KKGWK LVCADTFRAGAFDQLKQNATKA+IPFYGSYTE+DPV IA EGVE FK
Sbjct: 121 LAYYYHKKGWKTCLVCADTFRAGAFDQLKQNATKARIPFYGSYTEADPVLIAEEGVERFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KE ++IIVDTSGRHKQEA+LFEEM Q+S+A V+P VIFV+D++IGQAA QAQAFK +
Sbjct: 181 KEGFEIIIVDTSGRHKQEASLFEEMLQISKA-VDPQNVIFVLDATIGQAALGQAQAFKAT 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V VG+VI+TK+DGHAKGGGALSAVAAT+SP+IFIGTGEHM++FE F+ K F+ +LLGMGD
Sbjct: 240 VDVGSVIMTKLDGHAKGGGALSAVAATQSPIIFIGTGEHMEDFERFETKAFIGKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G M+ + + + +D ELL KL G F+LR MYEQFQNI+KMGP G++ M+PGF SE
Sbjct: 300 IGGLMEVVQD-LKLDNNKELLTKLQAGVFSLRDMYEQFQNIMKMGPFGKIMGMIPGFDSE 358
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEM 419
L+ KG E+ES ++KR MT+MDSMT+ ELDS +R MR+ARG+G REV ++
Sbjct: 359 LITKGSEQESMRRLKRCMTIMDSMTDTELDSDGKIFTTQPNRCMRVARGAGAHPREVADL 418
Query: 420 LEEYKRLAKIWSKMKGLK-IPKKGEMS-----ALSRNMNAQHMSKVLPQGMLKQIGGVGG 473
L +YK+ A + +M G+K + K G+MS A + +NAQ M+K++ +LKQ+GG+GG
Sbjct: 419 LAQYKKFAAMVKQMGGMKGLFKGGDMSRNVNPAQMQQLNAQ-MAKMMDPRVLKQMGGMGG 477
Query: 474 LQNLMKQMGS 483
+QN+MKQ S
Sbjct: 478 IQNMMKQFTS 487
>gi|348539542|ref|XP_003457248.1| PREDICTED: signal recognition particle 54 kDa protein-like
[Oreochromis niloticus]
Length = 504
Score = 594 bits (1531), Expect = e-167, Method: Compositional matrix adjust.
Identities = 295/505 (58%), Positives = 388/505 (76%), Gaps = 18/505 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNATII+E+VLN L E+ ALL+ADV KLV++++ N+K +
Sbjct: 1 MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCAALLEADVNIKLVKQLRENVKSAI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+L+++A+G NKRR+IQ A+F EL K++DPG ++TP KGK +VIMFVGLQGSGKTTTC+K
Sbjct: 61 DLEEMASGLNKRRMIQHAVFKELVKLVDPGVKAWTPTKGKNNVIMFVGLQGSGKTTTCSK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY+Q+KGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGVE FK
Sbjct: 121 LAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVVIASEGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
EN ++IIVDTSGRHKQE +LFEEM QVS A V PD +++VMD+SIGQA QA+AFK
Sbjct: 181 AENFEIIIVDTSGRHKQEDSLFEEMLQVSNA-VQPDNIVYVMDASIGQACESQAKAFKDK 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V V +VIVTK+DGHAKGGGALSAVAAT+SP+IFIGTGEH+D+FE F +PF+S+LLGMGD
Sbjct: 240 VDVASVIVTKLDGHAKGGGALSAVAATRSPIIFIGTGEHIDDFEPFKTQPFISKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G +D+++E + +D EL+ KL G FTLR MYEQFQNI+KMGP GQ+ M+PGF ++
Sbjct: 300 IEGLIDRVNE-LKLDDNEELIDKLKHGQFTLRDMYEQFQNIMKMGPFGQIMGMIPGFGTD 358
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQVREVM 417
M KG E+ES A++K+ MT+MDSM ++ELDS + KL + +RI R+ARGSG R+V
Sbjct: 359 FMSKGNEQESMARLKKLMTIMDSMNDQELDSKDGAKLFSKQPNRIQRVARGSGVATRDVQ 418
Query: 418 EMLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNA-------QHMSKVLPQGMLKQIG 469
E+L +Y + A++ KM G+K + K G+M S+N+N Q M+K++ +L +G
Sbjct: 419 ELLTQYTKFAQMVKKMGGIKGLFKGGDM---SKNVNPSQMAKLNQQMAKMMDPRVLHHMG 475
Query: 470 GVGGLQNLMKQM--GSTKDMMGMFG 492
G+ GLQ++M+Q G+ +M GM G
Sbjct: 476 GMAGLQSMMRQFQQGAAGNMKGMMG 500
>gi|41055859|ref|NP_957282.1| signal recognition particle 54 kDa protein [Danio rerio]
gi|28277732|gb|AAH45474.1| Signal recognition particle 54 [Danio rerio]
gi|45709065|gb|AAH67588.1| Signal recognition particle 54 [Danio rerio]
gi|182891276|gb|AAI64217.1| Srp54 protein [Danio rerio]
Length = 504
Score = 593 bits (1528), Expect = e-167, Method: Compositional matrix adjust.
Identities = 296/505 (58%), Positives = 387/505 (76%), Gaps = 18/505 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNATII+E+VLN L E+ ALL+ADV KLV++++ N+K +
Sbjct: 1 MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCAALLEADVNIKLVKQLRENVKAAI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+L+++A+G NKRR+IQ A+F EL K++DPG ++TP KGK +VIMFVGLQGSGKTTTC+K
Sbjct: 61 DLEEMASGLNKRRMIQHAVFKELVKLVDPGVKAWTPTKGKNNVIMFVGLQGSGKTTTCSK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY Q+KGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGVE FK
Sbjct: 121 LAYYFQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIAAEGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
EN ++IIVDTSGRHKQE +LFEEM QVS A V PD +++VMD+SIGQA QA+AFK
Sbjct: 181 SENFEIIIVDTSGRHKQEDSLFEEMLQVSNA-VQPDNIVYVMDASIGQACEAQAKAFKDK 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V V +VIVTK+DGHAKGGGALSAVAATKSP+IFIGTGEH+D+FE F +PF+S+LLGMGD
Sbjct: 240 VDVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G +DK++E + +D EL+ KL G FTLR MYEQFQNI+KMGP GQ+ M+PGF ++
Sbjct: 300 IEGLIDKVNE-LKLDDNEELIDKLKHGQFTLRDMYEQFQNIMKMGPFGQIMGMIPGFGTD 358
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQVREVM 417
M KG E+ES A++K+ MT+MDSM ++ELD+ + KL + +RI R+ARGSG R+V
Sbjct: 359 FMSKGNEQESMARLKKLMTIMDSMNDQELDNKDGAKLFSKQPNRIQRVARGSGVATRDVQ 418
Query: 418 EMLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNA-------QHMSKVLPQGMLKQIG 469
E+L +Y + A++ KM G+K + K G+M S+N+N Q M+K++ +L +G
Sbjct: 419 ELLTQYTKFAQMVKKMGGIKGLFKGGDM---SKNVNPSQMAKLNQQMAKMMDPRVLHHMG 475
Query: 470 GVGGLQNLMKQM--GSTKDMMGMFG 492
G+ GLQ++M+Q G+ +M GM G
Sbjct: 476 GMAGLQSMMRQFQQGAAGNMKGMMG 500
>gi|346465765|gb|AEO32727.1| hypothetical protein [Amblyomma maculatum]
Length = 518
Score = 593 bits (1528), Expect = e-167, Method: Compositional matrix adjust.
Identities = 296/506 (58%), Positives = 386/506 (76%), Gaps = 21/506 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNATII+++VL+ L EI ALL+AD+ KLV++++ N++ ++
Sbjct: 16 MVLADLGRKITNALRSLSNATIINKEVLDSMLKEICTALLEADINIKLVKQLRENVRSVI 75
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++D++AAG NKRR+IQ A+F EL K++DPG ++ P KGK +VIMFVGLQGSGKTTTCTK
Sbjct: 76 DIDEMAAGLNKRRMIQSAVFKELIKLVDPGVKAWQPAKGKNNVIMFVGLQGSGKTTTCTK 135
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++ KKGWK LVCADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGVE FK
Sbjct: 136 LAYHYLKKGWKTCLVCADTFRAGAFDQLKQNATKARIPFYGSYTEVDPVVIAQEGVEKFK 195
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
E ++I+VDTSGRHKQE +LFEEM QVS AT NPD +IFVMD+SIGQA QA+AFK+
Sbjct: 196 SEGFEIIVVDTSGRHKQEDSLFEEMLQVSNAT-NPDNIIFVMDASIGQACEAQARAFKEK 254
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V VGAVIVTK+DGHAKGGGALSAVAAT+SP+IFIGTGEH+D+FE F VKPF+S+LLGMGD
Sbjct: 255 VDVGAVIVTKLDGHAKGGGALSAVAATRSPIIFIGTGEHIDDFEPFKVKPFISKLLGMGD 314
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G +DK++E + +D EL++KL G FTLR MYEQFQNI+KMGP Q+ M+PGFSS+
Sbjct: 315 IEGLIDKVNE-LKLDDNEELIEKLKHGEFTLRDMYEQFQNIMKMGPFSQIMGMIPGFSSD 373
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDS-SNPKLMN--DSRIMRIARGSGRQVREVM 417
M KG E+ES ++K+ MT+MDSM ++ELD KL + R+ R+ARG+G REV
Sbjct: 374 FMTKGNEQESMGRLKKLMTIMDSMNDQELDHREGAKLFSRQTGRVTRVARGAGVTTREVQ 433
Query: 418 EMLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNA-------QHMSKVLPQGMLKQIG 469
E+L +Y + A + KM G+K + K G+M ++N+N Q M+K++ +L Q+G
Sbjct: 434 ELLAQYTKFAAMVKKMGGIKGLFKGGDM---AKNVNQAQMNKLNQQMAKMMDPRVLHQMG 490
Query: 470 GVGGLQNLMKQM-----GSTKDMMGM 490
G GLQN+M+Q+ G+ ++M M
Sbjct: 491 GFSGLQNMMRQLQGAASGNVNNLMNM 516
>gi|440804234|gb|ELR25111.1| signal peptide binding domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 496
Score = 592 bits (1527), Expect = e-166, Method: Compositional matrix adjust.
Identities = 290/479 (60%), Positives = 375/479 (78%), Gaps = 6/479 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LG I+ A++ MSN+T+ID+ V++ L EI+ AL+ ADVQF LV +++ NI V
Sbjct: 1 MVLAELGSKITHALRNMSNSTVIDKDVVDAMLKEISNALMAADVQFNLVLKLRKNILDKV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++D+AAG NKR+IIQQA+F+ELC ++DPG+ + KGKP+VIMFVGLQG+GKTTT TK
Sbjct: 61 KIEDMAAGLNKRKIIQQAVFDELCALVDPGQKPYKLVKGKPNVIMFVGLQGAGKTTTVTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++++K WK LVCADTFRAGAFDQLKQNATKAKIPFYGSYTE+DPV++A EGVE FK
Sbjct: 121 LAYHYKRKSWKACLVCADTFRAGAFDQLKQNATKAKIPFYGSYTETDPVKVAEEGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
+E ++IIVDTSGRHKQEAALFEEM QV+ A + PD V FVMD +IGQAAFDQAQAFKQ
Sbjct: 181 QEGYEIIIVDTSGRHKQEAALFEEMEQVA-AAIKPDTVTFVMDGTIGQAAFDQAQAFKQK 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V +G++I+TK+DGHAKGGGALSAVAAT SP+ FIGTGEH+D+FE F V+PFVS++LGMGD
Sbjct: 240 VGIGSIIMTKLDGHAKGGGALSAVAATGSPITFIGTGEHIDDFETFAVRPFVSKMLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
+G +D I + VP+D QPEL ++LSEG FTLR MYEQF NILKMGP+ +V MLPG S
Sbjct: 300 MAGLVDTIKKAVPLDGQPELYKRLSEGIFTLRDMYEQFSNILKMGPLNKVMEMLPGMGS- 358
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEML 420
++ +G ++S KIK YMT+MDSMT+E DS + SRI+RIARGSGR V+EV E+L
Sbjct: 359 ILKEGAGRDSSQKIKSYMTIMDSMTDELDDSKVLAKNSQSRIVRIARGSGRSVKEVNELL 418
Query: 421 EEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQIGGVGGLQNLMK 479
E++K K+ K+K + RN++ MS ++P ++KQ+GG+G +QN+M+
Sbjct: 419 EQFKHFEKVMKKVK--GLKLGKGGELKGRNLS--QMSNLIPPHVMKQMGGMGAIQNMMR 473
>gi|148223543|ref|NP_001080564.1| signal recognition particle 54kDa [Xenopus laevis]
gi|27924197|gb|AAH44991.1| Srp54 protein [Xenopus laevis]
Length = 504
Score = 592 bits (1526), Expect = e-166, Method: Compositional matrix adjust.
Identities = 294/505 (58%), Positives = 385/505 (76%), Gaps = 21/505 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNATII+E+VLN L E+ ALL+ADV KLV++++ N+K +
Sbjct: 1 MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENVKSAI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+L+++A+G NKR++IQ A+F EL K++DPG ++TP KGKP+VIMFVGLQGSGKTTTCTK
Sbjct: 61 DLEEMASGLNKRKMIQTAVFKELVKLVDPGVKAWTPTKGKPNVIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY+Q+KGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGVE FK
Sbjct: 121 LAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVNIAYEGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
EN +++IVDTSGRHKQE +LFEEM QVS A V PD +++VMD+SIGQA QA+AFK
Sbjct: 181 NENFEIVIVDTSGRHKQEDSLFEEMLQVSNA-VQPDNIVYVMDASIGQACEAQAKAFKDK 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V V +VIVTK+DGHAKGGGALSAVAATKSP+IFIGTGEH+D+FE F +PF+S+LLGMGD
Sbjct: 240 VDVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G +DK++E + +D ++ KL G FTLR MYEQFQNI+KMGP Q+ M+PGF +
Sbjct: 300 IEGLIDKVNE-LNLDDNEAMIDKLKHGQFTLRDMYEQFQNIMKMGPFSQILGMIPGFGQD 358
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQVREVM 417
M KG E+ES A++K+ MT+MDSM + ELD+++ K+ R+ R+ARGSG R+V
Sbjct: 359 FMSKGNEQESMARLKKLMTIMDSMNDLELDNTDGAKVFTKQPGRVQRVARGSGASARDVQ 418
Query: 418 EMLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNA-------QHMSKVLPQGMLKQIG 469
E+L +Y + A++ KM G+K + K G+M S+N+N Q M+K++ +L+ +G
Sbjct: 419 ELLAQYTKFAQMVKKMGGIKGLFKGGDM---SKNVNPSQMAKLNQQMAKMMDPRVLQHMG 475
Query: 470 GVGGLQNLMKQM-----GSTKDMMG 489
G+ GLQ++MKQ GSTK MMG
Sbjct: 476 GMAGLQSMMKQFQQGAAGSTKGMMG 500
>gi|126283547|ref|XP_001363021.1| PREDICTED: signal recognition particle 54 kDa protein-like
[Monodelphis domestica]
gi|334324872|ref|XP_003340575.1| PREDICTED: signal recognition particle 54 kDa protein-like
[Monodelphis domestica]
Length = 504
Score = 591 bits (1523), Expect = e-166, Method: Compositional matrix adjust.
Identities = 292/502 (58%), Positives = 389/502 (77%), Gaps = 12/502 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNATII+E+VLN L E+ ALL+ADV KLV++++ N+K +
Sbjct: 1 MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENVKSAI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+L+++A+G NKR++IQ A+F EL K++DPG ++TP KGKP+VIMFVGLQGSGKTTTC+K
Sbjct: 61 DLEEMASGLNKRKMIQHAVFKELVKLVDPGVKAWTPTKGKPNVIMFVGLQGSGKTTTCSK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY+Q+KGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGVE FK
Sbjct: 121 LAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
EN ++IIVDTSGRHKQE +LFEEM QV+ A + PD +++VMD+SIGQA QA+AFK
Sbjct: 181 NENFEIIIVDTSGRHKQEDSLFEEMLQVANA-IQPDNIVYVMDASIGQACEAQAKAFKDK 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V V +VIVTK+DGHAKGGGALSAVAATKSP+IFIGTGEH+D+FE F +PF+S+LLGMGD
Sbjct: 240 VDVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G +DK++E + +D L++KL G FTLR MYEQFQNI+KMGP Q+ M+PGF ++
Sbjct: 300 IEGLIDKVNE-LKLDDNEALIEKLKHGQFTLRDMYEQFQNIMKMGPFSQILGMIPGFGTD 358
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQVREVM 417
M KG E+ES A++K+ MT+MDSM ++ELDS++ K+ + RI R+ARGSG R+V
Sbjct: 359 FMSKGNEQESMARLKKLMTIMDSMNDQELDSTDGAKVFSKQPGRIQRVARGSGVSTRDVQ 418
Query: 418 EMLEEYKRLAKIWSKMKGLK-IPKKGEMSA-LSRNMNA---QHMSKVLPQGMLKQIGGVG 472
E+L +Y + A++ KM G+K + K G+MS +S++ A Q M+K++ +L +GG+
Sbjct: 419 ELLTQYTKFAQMVKKMGGIKGLFKGGDMSKNVSQSQMAKLNQQMAKMMDPRVLHHMGGMA 478
Query: 473 GLQNLMKQM--GSTKDMMGMFG 492
GLQ++M+Q G+ +M GM G
Sbjct: 479 GLQSMMRQFQQGAAGNMKGMMG 500
>gi|387916030|gb|AFK11624.1| signal recognition particle protein [Callorhinchus milii]
Length = 504
Score = 590 bits (1522), Expect = e-166, Method: Compositional matrix adjust.
Identities = 294/505 (58%), Positives = 385/505 (76%), Gaps = 18/505 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNATII+E+VLN L E+ ALL+ADV KLV++++ N+K +
Sbjct: 1 MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENVKAAI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+L+++A+G NKRR+IQ A+F EL K++DPG ++TP KGK +VIMFVGLQGSGKTTTC+K
Sbjct: 61 DLEEMASGLNKRRMIQHAVFKELVKLVDPGVKAWTPTKGKQNVIMFVGLQGSGKTTTCSK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY Q+KGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGVE FK
Sbjct: 121 LAYYFQRKGWKSCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVMIAAEGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KEN ++IIVDTSGRHKQE +LFEEM QVS ++ PD +++VMD+SIGQA QA+AFK
Sbjct: 181 KENFEIIIVDTSGRHKQEDSLFEEMLQVSN-SIQPDNIVYVMDASIGQACEAQAKAFKDK 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V V +VIVTK+DGHAKGGGALSAVAATKSP+IFIGTGEH+D+FE F +PF+S+LLGMGD
Sbjct: 240 VDVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G +DK++E + +D EL+ KL G FTLR MYEQFQNI+KMGP Q+ M+PGF ++
Sbjct: 300 IEGLIDKVNE-LKLDDNEELIDKLKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFGTD 358
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQVREVM 417
M KG E+ES A++K+ MT+MDSM ++ELD+ + KL + RI R+ARGSG R+V
Sbjct: 359 FMSKGNEQESMARLKKLMTIMDSMNDQELDNKDGAKLFSKQPGRIQRVARGSGVTTRDVQ 418
Query: 418 EMLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNA-------QHMSKVLPQGMLKQIG 469
E+L +Y + A++ KM G+K + K G+M S+N+N Q M+K++ +L +G
Sbjct: 419 ELLTQYTKFAQMVKKMGGIKGLFKGGDM---SKNVNPSQMAKLNQQMAKMMDPRVLHHMG 475
Query: 470 GVGGLQNLMKQM--GSTKDMMGMFG 492
G+ GLQ +M+Q G+ +M GM G
Sbjct: 476 GMAGLQTMMRQFQQGAAGNMKGMMG 500
>gi|332024403|gb|EGI64601.1| Signal recognition particle 54 kDa protein [Acromyrmex echinatior]
Length = 506
Score = 590 bits (1520), Expect = e-166, Method: Compositional matrix adjust.
Identities = 292/509 (57%), Positives = 389/509 (76%), Gaps = 21/509 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNAT+I+E+VLN L EI ALL+ADV +LV++++ N++K++
Sbjct: 1 MVLADLGRKITSALRSLSNATVINEEVLNSMLKEICAALLEADVNIRLVKKLRENVRKVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ DD+A G NKRR+IQ A+F EL K++DPG ++ P KG+P++IMFVGLQGSGKTTTCTK
Sbjct: 61 DFDDMAGGINKRRMIQSAVFKELVKLIDPGVKAYQPVKGRPNIIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++ KK WK LVCADTFRAGA+DQ+KQNATKA+IPFYGSYTE DPV IA +GV+ FK
Sbjct: 121 LAYHYLKKNWKACLVCADTFRAGAYDQIKQNATKARIPFYGSYTEVDPVTIAQDGVDMFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KE ++IIVDTSGRHKQE +LFEEM QV+ A V PD +IFVMD++IGQA QA+AFK+
Sbjct: 181 KEGYEIIIVDTSGRHKQEESLFEEMLQVANA-VQPDNIIFVMDATIGQACEAQAKAFKER 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V+VG++I+TK+DGHAKGGGALSAVAAT+SPVIF+GTGEH+D+ E F KPF+S+LLGMGD
Sbjct: 240 VNVGSIIITKLDGHAKGGGALSAVAATQSPVIFVGTGEHIDDLEPFKTKPFISKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G +DK++E + +D ELL+K+ G FTLR MYEQFQNI+KMGP Q+ +M+PGFS +
Sbjct: 300 IEGLIDKVNE-LNLDDNEELLEKIKHGQFTLRDMYEQFQNIMKMGPFSQLMNMIPGFSQD 358
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQVREVM 417
M KG E+ES A++KR MT+MDSM + ELDS + KL + RIMR+ARGSG +EV
Sbjct: 359 FMSKGTEQESMARLKRLMTIMDSMNDSELDSRDGAKLFSKQPGRIMRVARGSGVTEKEVK 418
Query: 418 EMLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQ-------GMLKQIG 469
+++ +Y + A + KM G+K + K G+M ++N+N M+K+ Q +L Q+G
Sbjct: 419 DLITQYTKFAAVVKKMGGIKGLFKAGDM---AKNVNPTQMAKLNHQMAKMMDPRVLHQMG 475
Query: 470 GVGGLQNLMKQM-----GSTKDMMGMFGG 493
G+ GLQN+MKQ+ G ++MG FGG
Sbjct: 476 GMPGLQNIMKQLQQGAAGGLGNLMGGFGG 504
>gi|302815721|ref|XP_002989541.1| hypothetical protein SELMODRAFT_129975 [Selaginella moellendorffii]
gi|300142719|gb|EFJ09417.1| hypothetical protein SELMODRAFT_129975 [Selaginella moellendorffii]
Length = 467
Score = 589 bits (1519), Expect = e-166, Method: Compositional matrix adjust.
Identities = 292/481 (60%), Positives = 375/481 (77%), Gaps = 16/481 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL +LG IS AIQ+++ AT+ID+K L C+NEIT ALLQADVQFKLV+ + +N++K V
Sbjct: 1 MVLGELGSRISGAIQRLNTATVIDDKALTICVNEITHALLQADVQFKLVQALSSNVRKSV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ LAAGH+KR IIQ+A+F+EL MLD GKPSFTP KG+ + +M VGLQG GKTTTCTK
Sbjct: 61 --EKLAAGHDKRHIIQKAVFHELHAMLDAGKPSFTPTKGRTNAVMLVGLQGCGKTTTCTK 118
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YA +++KKG+ PALVCADTFRAGAFDQLKQNATK KIPFYGSYTE+DPV IA EGV F
Sbjct: 119 YALHYRKKGFNPALVCADTFRAGAFDQLKQNATKVKIPFYGSYTETDPVVIAQEGVRKFA 178
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
DLII+DTSGRHKQE ALFEEMRQ++ AT NPDL+IFVMDSSIGQAA DQA AF++S
Sbjct: 179 DTKHDLIILDTSGRHKQENALFEEMRQLAAAT-NPDLIIFVMDSSIGQAANDQALAFRES 237
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
VGAVI+TK+DGHAKGGGALSAVAATKSP+IF+GTGE D+FE F+ K FVSRLLGMGD
Sbjct: 238 AKVGAVIITKIDGHAKGGGALSAVAATKSPIIFLGTGEKADDFETFESKAFVSRLLGMGD 297
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
+GF +KI EVVP + QPEL+QKL++GN + + + +Q +NI MG + Q+ SM+PGF++
Sbjct: 298 LAGFANKIKEVVPSELQPELVQKLADGNISFKFLCDQIENITSMGSLSQLMSMIPGFNNV 357
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEML 420
+ + + ++Y ++DSMTNEE +SS+ +++SRI+R+A+GSG V V +M+
Sbjct: 358 NV----QSFDIQQFRKYRVILDSMTNEERNSSS---LSESRILRLAKGSGTSVDNVQQMM 410
Query: 421 EEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQIGGVGGLQNLMKQ 480
K ++K +MKGLK+ KKG+ L + + Q +SK+LP ++KQ GG+GGLQ LMKQ
Sbjct: 411 NHVKTMSK---QMKGLKLNKKGD---LGKGKSMQDLSKMLPANIVKQFGGMGGLQTLMKQ 464
Query: 481 M 481
+
Sbjct: 465 L 465
>gi|31981338|ref|NP_036029.2| signal recognition particle 54 kDa protein [Mus musculus]
gi|153791789|ref|NP_001093579.1| signal recognition particle 54 kDa protein [Mus musculus]
gi|73622264|sp|P14576.2|SRP54_MOUSE RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|12848354|dbj|BAB27921.1| unnamed protein product [Mus musculus]
gi|18043829|gb|AAH19683.1| Signal recognition particle 54a [Mus musculus]
gi|74193669|dbj|BAE22786.1| unnamed protein product [Mus musculus]
Length = 504
Score = 589 bits (1518), Expect = e-165, Method: Compositional matrix adjust.
Identities = 292/502 (58%), Positives = 388/502 (77%), Gaps = 12/502 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNATII+E+VLN L E+ ALL+ADV KLV++++ N+K +
Sbjct: 1 MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENVKSAI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+L+++A+G NKR++IQ A+F EL K++DPG ++TP KGK +VIMFVGLQGSGKTTTC+K
Sbjct: 61 DLEEMASGLNKRKMIQHAVFKELVKLVDPGVKAWTPTKGKQNVIMFVGLQGSGKTTTCSK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY+Q+KGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGVE FK
Sbjct: 121 LAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
EN ++IIVDTSGRHKQE +LFEEM QVS A + PD +++VMD+SIGQA QA+AFK
Sbjct: 181 NENFEIIIVDTSGRHKQEDSLFEEMLQVSNA-IQPDNIVYVMDASIGQACEAQAKAFKDK 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V V +VIVTK+DGHAKGGGALSAVAATKSP+IFIGTGEH+D+FE F +PF+S+LLGMGD
Sbjct: 240 VDVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G +DK++E + +D L++KL G FTLR MYEQFQNI+KMGP Q+ M+PGF ++
Sbjct: 300 IEGLIDKVNE-LKLDDNEALIEKLKHGQFTLRDMYEQFQNIMKMGPFSQILGMIPGFGTD 358
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQVREVM 417
M KG E+ES A++K+ MT+MDSM ++ELDS++ K+ + RI R+ARGSG R+V
Sbjct: 359 FMSKGNEQESMARLKKLMTIMDSMNDQELDSTDGAKVFSKQPGRIQRVARGSGVSTRDVQ 418
Query: 418 EMLEEYKRLAKIWSKMKGLK-IPKKGEMSA-LSRNMNA---QHMSKVLPQGMLKQIGGVG 472
E+L +Y + A++ KM G+K + K G+MS +S++ A Q M+K++ +L +GG+
Sbjct: 419 ELLTQYTKFAQMVKKMGGIKGLFKGGDMSKNVSQSQMAKLNQQMAKMMDPRVLHHMGGMA 478
Query: 473 GLQNLMKQM--GSTKDMMGMFG 492
GLQ++M+Q G+ +M GM G
Sbjct: 479 GLQSMMRQFQQGAAGNMKGMMG 500
>gi|410898714|ref|XP_003962842.1| PREDICTED: signal recognition particle 54 kDa protein-like isoform
1 [Takifugu rubripes]
Length = 504
Score = 589 bits (1518), Expect = e-165, Method: Compositional matrix adjust.
Identities = 292/503 (58%), Positives = 387/503 (76%), Gaps = 18/503 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNATII+E+VLN L E+ ALL+ADV KLV++++ N+K +
Sbjct: 1 MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCAALLEADVNIKLVKQLRENVKAAI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+L+++A+G NKRR+IQ A+F EL K++DPG ++TP KGK +VIMFVGLQGSGKTTTC+K
Sbjct: 61 DLEEMASGLNKRRMIQHAVFKELVKLVDPGVKAWTPTKGKNNVIMFVGLQGSGKTTTCSK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY+Q+KGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGV+ FK
Sbjct: 121 LAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVVIATEGVDKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
EN ++IIVDTSGRHKQE +LFEEM QVS A V PD +++VMD+SIGQA QA+AFK
Sbjct: 181 MENFEIIIVDTSGRHKQEDSLFEEMLQVSNA-VQPDNIVYVMDASIGQACESQAKAFKDK 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V V +VIVTK+DGHAKGGGALSAVAAT+SP+IFIGTGEH+D+FE F +PF+S+LLGMGD
Sbjct: 240 VDVASVIVTKLDGHAKGGGALSAVAATRSPIIFIGTGEHIDDFEPFKTQPFISKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G +D++++ + +D EL+ KL G FTLR MYEQFQNI+KMGP GQ+ M+PGF ++
Sbjct: 300 IEGLIDRVND-LKLDDNEELIDKLKHGQFTLRDMYEQFQNIMKMGPFGQIMGMIPGFGTD 358
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQVREVM 417
M KG E+ES A++K+ MT+MDSM ++ELDS + KL + +RI R+ARGSG R+V
Sbjct: 359 FMSKGNEQESMARLKKLMTIMDSMNDQELDSKDGAKLFSKQPNRIQRVARGSGVATRDVQ 418
Query: 418 EMLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNA-------QHMSKVLPQGMLKQIG 469
E+L +Y + A++ KM G+K + K G+M S+N+N Q M+K++ +L +G
Sbjct: 419 ELLTQYTKFAQMVKKMGGIKGLFKGGDM---SKNVNPSQMAKLNQQMAKMMDPRVLHHMG 475
Query: 470 GVGGLQNLMKQM--GSTKDMMGM 490
G+ GLQ++M+Q G+ +M GM
Sbjct: 476 GMAGLQSMMRQFQQGAAGNMKGM 498
>gi|302761692|ref|XP_002964268.1| hypothetical protein SELMODRAFT_82182 [Selaginella moellendorffii]
gi|300167997|gb|EFJ34601.1| hypothetical protein SELMODRAFT_82182 [Selaginella moellendorffii]
Length = 467
Score = 588 bits (1517), Expect = e-165, Method: Compositional matrix adjust.
Identities = 293/481 (60%), Positives = 374/481 (77%), Gaps = 16/481 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL +LG IS AIQ+++ AT+ID+K L C+NEIT ALLQADVQFKLV+ + +N++K V
Sbjct: 1 MVLGELGSRISGAIQRLNTATVIDDKALTICVNEITHALLQADVQFKLVQALSSNVRKSV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ LAAGH+KR IIQ+A+F+EL MLD GKPSFTP KG+ +V+M VGLQG GKTTTCTK
Sbjct: 61 --EKLAAGHDKRHIIQKAVFHELRAMLDAGKPSFTPTKGRTNVVMLVGLQGCGKTTTCTK 118
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YA +++KKG+ PALVCADTFRAGAFDQLKQNATK KIPFYGSYTE+DPV IA EGV F
Sbjct: 119 YALHYRKKGFNPALVCADTFRAGAFDQLKQNATKVKIPFYGSYTETDPVVIAQEGVRKFA 178
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
DLII+DTSGRHKQE ALFEEMRQ++ AT NPDL+IFVMDSSIGQAA DQA AF++S
Sbjct: 179 DAKHDLIILDTSGRHKQENALFEEMRQLAAAT-NPDLIIFVMDSSIGQAANDQALAFRES 237
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
VGAVI+TK+DGHAKGGGALSAVAATKSP+IF+GTGE D FE F+ K FVSRLLGMGD
Sbjct: 238 AKVGAVIITKIDGHAKGGGALSAVAATKSPIIFLGTGEKADAFETFESKAFVSRLLGMGD 297
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
+GF +KI EVVP + QPEL+QKL++GN + + + +Q +NI MG + Q+ SM+PGF++
Sbjct: 298 IAGFANKIKEVVPSELQPELVQKLADGNISFKFLCDQIENITSMGSLSQLMSMIPGFNN- 356
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEML 420
+ + ++Y ++DSMTNEE +SS+ +++SRI+R+A+GSG V V +M+
Sbjct: 357 ---INVQSFDIQQFRKYRVILDSMTNEERNSSS---LSESRILRLAKGSGTSVDNVQQMV 410
Query: 421 EEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQIGGVGGLQNLMKQ 480
K ++K +MKGLK+ KKG+ L + + Q +SK+LP ++KQ GG+GGLQ LMKQ
Sbjct: 411 NHVKTMSK---QMKGLKLNKKGD---LGKGKSMQDLSKMLPANIVKQFGGMGGLQTLMKQ 464
Query: 481 M 481
+
Sbjct: 465 L 465
>gi|427783877|gb|JAA57390.1| Putative signal recognition particle subunit srp54 [Rhipicephalus
pulchellus]
Length = 503
Score = 588 bits (1517), Expect = e-165, Method: Compositional matrix adjust.
Identities = 294/506 (58%), Positives = 384/506 (75%), Gaps = 21/506 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNATII+++VL+ L EI ALL+AD+ KLV++++ N++ ++
Sbjct: 1 MVLADLGRKITNALRSLSNATIINKEVLDSMLKEICTALLEADINIKLVKQLRENVRSVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++D++AAG NKRR+IQ A+F EL +++DPG ++ P KGK +VIMFVGLQGSGKTTTCTK
Sbjct: 61 DIDEMAAGLNKRRMIQSAVFKELIRLVDPGVKAWQPTKGKNNVIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++ KKGWK LVCADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGVE FK
Sbjct: 121 LAYHYLKKGWKTCLVCADTFRAGAFDQLKQNATKARIPFYGSYTEVDPVVIAQEGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
E ++I+VDTSGRHKQE +LFEEM QVS AT PD +IFVMD+SIGQA QA+AFK+
Sbjct: 181 NEGFEIIVVDTSGRHKQEDSLFEEMLQVSNAT-KPDNIIFVMDASIGQACESQARAFKEK 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V VGAVIVTK+DGHAKGGGALSAVAAT SP+IFIGTGEH+D+FE F VKPF+S+LLGMGD
Sbjct: 240 VDVGAVIVTKLDGHAKGGGALSAVAATHSPIIFIGTGEHIDDFEPFKVKPFISKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G +DK++E + +D EL++KL G FTLR MYEQFQNI+KMGP Q+ M+PGFSS+
Sbjct: 300 IEGLIDKVNE-LKLDDNEELIEKLKHGEFTLRDMYEQFQNIMKMGPFSQIMGMIPGFSSD 358
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDS-SNPKLMN--DSRIMRIARGSGRQVREVM 417
M KG E+ES ++K+ MT+MDSM ++ELD KL + R+ R+ARG+G REV
Sbjct: 359 FMTKGNEQESMGRLKKLMTIMDSMNDQELDHREGAKLFSRQTGRVTRVARGAGVTSREVQ 418
Query: 418 EMLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNA-------QHMSKVLPQGMLKQIG 469
E+L +Y + A + KM G+K + K G+M ++N+N Q M+K++ +L Q+G
Sbjct: 419 ELLAQYTKFAAMVKKMGGIKGLFKGGDM---AKNVNQAQMNKLNQQMAKMMDPRVLHQMG 475
Query: 470 GVGGLQNLMKQM-----GSTKDMMGM 490
G GLQN+M+Q+ G+ ++M M
Sbjct: 476 GFSGLQNMMRQLQGAASGNVNNLMNM 501
>gi|209153928|gb|ACI33196.1| Signal recognition particle 54 kDa protein [Salmo salar]
Length = 504
Score = 588 bits (1517), Expect = e-165, Method: Compositional matrix adjust.
Identities = 293/505 (58%), Positives = 386/505 (76%), Gaps = 18/505 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNATII+E+VLN L E+ ALL+ADV KLV++++ N+K +
Sbjct: 1 MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCAALLEADVNIKLVKQLRENVKSAI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+L+++A+G NKRR+IQ ++F EL K++DPG ++TP KGK +VIMFVGLQGSGKTTTC+K
Sbjct: 61 DLEEMASGLNKRRMIQHSVFKELVKLVDPGVKAWTPTKGKNNVIMFVGLQGSGKTTTCSK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY+Q+KGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGVE FK
Sbjct: 121 LAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVVIAAEGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
E+ ++IIVDTSGRHKQE +LFEEM QVS A V PD +++VMD+SIGQA QA+AFK
Sbjct: 181 NESFEIIIVDTSGRHKQEDSLFEEMLQVSNA-VQPDNIVYVMDASIGQACEAQAKAFKDK 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V V +VIVTK+DGHAKGGGALSAVAATKSP+IFIGTGEH+D+ E F +PF+S+LLGMGD
Sbjct: 240 VEVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDLEPFKTQPFISKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G +DK++E + +D EL+ KL G FTLR MYEQFQNI+KMGP GQ+ M+PGF ++
Sbjct: 300 IEGLIDKVNE-LKLDDNEELIDKLKHGQFTLRDMYEQFQNIMKMGPFGQIMGMIPGFGTD 358
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQVREVM 417
M KG E+ES A++K+ MT+MDSM ++ELD+ + KL +RI R+ARGSG R+V
Sbjct: 359 FMSKGNEQESMARLKKLMTIMDSMNDQELDNKDGAKLFTKQPNRIARVARGSGVATRDVQ 418
Query: 418 EMLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNA-------QHMSKVLPQGMLKQIG 469
E+L +Y + A++ KM G+K + K G+M S+N+N Q M+K++ +L +G
Sbjct: 419 ELLTQYTKFAQMVKKMGGIKGLFKGGDM---SKNVNPSQMAKLNQQMAKMMDPRVLHHMG 475
Query: 470 GVGGLQNLMKQM--GSTKDMMGMFG 492
G+ GLQ++M+Q G+ +M GM G
Sbjct: 476 GMAGLQSMMRQFQQGAAGNMKGMMG 500
>gi|4507215|ref|NP_003127.1| signal recognition particle 54 kDa protein isoform 1 [Homo sapiens]
gi|50979080|ref|NP_001003272.1| signal recognition particle 54 kDa protein [Canis lupus familiaris]
gi|84000369|ref|NP_001033290.1| signal recognition particle 54 kDa protein [Bos taurus]
gi|197103004|ref|NP_001126912.1| signal recognition particle 54 kDa protein [Pongo abelii]
gi|386780792|ref|NP_001247781.1| signal recognition particle 54 kDa protein [Macaca mulatta]
gi|114652592|ref|XP_001136048.1| PREDICTED: signal recognition particle 54 kDa protein isoform 5
[Pan troglodytes]
gi|149410337|ref|XP_001511597.1| PREDICTED: signal recognition particle 54 kDa protein-like isoform
1 [Ornithorhynchus anatinus]
gi|149692831|ref|XP_001491075.1| PREDICTED: signal recognition particle 54 kDa protein isoform 1
[Equus caballus]
gi|296214799|ref|XP_002753859.1| PREDICTED: signal recognition particle 54 kDa protein isoform 1
[Callithrix jacchus]
gi|301774887|ref|XP_002922872.1| PREDICTED: signal recognition particle 54 kDa protein-like
[Ailuropoda melanoleuca]
gi|332229141|ref|XP_003263750.1| PREDICTED: signal recognition particle 54 kDa protein isoform 1
[Nomascus leucogenys]
gi|335292471|ref|XP_001927834.3| PREDICTED: signal recognition particle 54 kDa protein isoform 1
[Sus scrofa]
gi|344274150|ref|XP_003408881.1| PREDICTED: signal recognition particle 54 kDa protein-like isoform
1 [Loxodonta africana]
gi|395838229|ref|XP_003792021.1| PREDICTED: signal recognition particle 54 kDa protein [Otolemur
garnettii]
gi|397501115|ref|XP_003821240.1| PREDICTED: signal recognition particle 54 kDa protein isoform 1
[Pan paniscus]
gi|402875937|ref|XP_003901747.1| PREDICTED: signal recognition particle 54 kDa protein isoform 1
[Papio anubis]
gi|410048161|ref|XP_003952519.1| PREDICTED: signal recognition particle 54 kDa protein [Pan
troglodytes]
gi|426248376|ref|XP_004017939.1| PREDICTED: signal recognition particle 54 kDa protein [Ovis aries]
gi|46577649|sp|P61010.1|SRP54_CANFA RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|46577650|sp|P61011.1|SRP54_HUMAN RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|68731680|sp|Q5R4R6.1|SRP54_PONAB RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|73621949|sp|Q4R965.1|SRP54_MACFA RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|122142857|sp|Q2T9U1.1|SRP54_BOVIN RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|119390387|pdb|2J37|W Chain W, Model Of Mammalian Srp Bound To 80s Rncs
gi|930|emb|CAA34385.1| unnamed protein product [Canis lupus familiaris]
gi|784999|emb|CAA60132.1| SRP 54 [Homo sapiens]
gi|1256820|gb|AAC50994.1| signal recognition particle [Homo sapiens]
gi|12653733|gb|AAH00652.1| Signal recognition particle 54kDa [Homo sapiens]
gi|13097267|gb|AAH03389.1| Signal recognition particle 54kDa [Homo sapiens]
gi|55733132|emb|CAH93250.1| hypothetical protein [Pongo abelii]
gi|67967747|dbj|BAE00356.1| unnamed protein product [Macaca fascicularis]
gi|83405301|gb|AAI11271.1| Signal recognition particle 54kDa [Bos taurus]
gi|90076082|dbj|BAE87721.1| unnamed protein product [Macaca fascicularis]
gi|90076300|dbj|BAE87830.1| unnamed protein product [Macaca fascicularis]
gi|177771971|gb|ACB73260.1| signal recognition particle (predicted) [Rhinolophus ferrumequinum]
gi|189053540|dbj|BAG35706.1| unnamed protein product [Homo sapiens]
gi|296475353|tpg|DAA17468.1| TPA: signal recognition particle 54 kDa protein [Bos taurus]
gi|325464281|gb|ADZ15911.1| signal recognition particle 54kDa [synthetic construct]
gi|351700055|gb|EHB02974.1| Signal recognition particle 54 kDa protein [Heterocephalus glaber]
gi|355693216|gb|EHH27819.1| hypothetical protein EGK_18109 [Macaca mulatta]
gi|355778517|gb|EHH63553.1| hypothetical protein EGM_16545 [Macaca fascicularis]
gi|380815890|gb|AFE79819.1| signal recognition particle 54 kDa protein isoform 1 [Macaca
mulatta]
gi|383421049|gb|AFH33738.1| signal recognition particle 54 kDa protein isoform 1 [Macaca
mulatta]
gi|384948994|gb|AFI38102.1| signal recognition particle 54 kDa protein isoform 1 [Macaca
mulatta]
gi|410210342|gb|JAA02390.1| signal recognition particle 54kDa [Pan troglodytes]
gi|410264744|gb|JAA20338.1| signal recognition particle 54kDa [Pan troglodytes]
gi|410294232|gb|JAA25716.1| signal recognition particle 54kDa [Pan troglodytes]
gi|410353847|gb|JAA43527.1| signal recognition particle 54kDa [Pan troglodytes]
gi|417402010|gb|JAA47866.1| Putative signal recognition particle subunit srp54 [Desmodus
rotundus]
gi|440909283|gb|ELR59207.1| Signal recognition particle 54 kDa protein [Bos grunniens mutus]
gi|226429|prf||1512310A SRP protein 54kD
Length = 504
Score = 588 bits (1516), Expect = e-165, Method: Compositional matrix adjust.
Identities = 291/502 (57%), Positives = 388/502 (77%), Gaps = 12/502 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNATII+E+VLN L E+ ALL+ADV KLV++++ N+K +
Sbjct: 1 MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENVKSAI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+L+++A+G NKR++IQ A+F EL K++DPG ++TP KGK +VIMFVGLQGSGKTTTC+K
Sbjct: 61 DLEEMASGLNKRKMIQHAVFKELVKLVDPGVKAWTPTKGKQNVIMFVGLQGSGKTTTCSK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY+Q+KGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGVE FK
Sbjct: 121 LAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
EN ++IIVDTSGRHKQE +LFEEM QV+ A + PD +++VMD+SIGQA QA+AFK
Sbjct: 181 NENFEIIIVDTSGRHKQEDSLFEEMLQVANA-IQPDNIVYVMDASIGQACEAQAKAFKDK 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V V +VIVTK+DGHAKGGGALSAVAATKSP+IFIGTGEH+D+FE F +PF+S+LLGMGD
Sbjct: 240 VDVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G +DK++E + +D L++KL G FTLR MYEQFQNI+KMGP Q+ M+PGF ++
Sbjct: 300 IEGLIDKVNE-LKLDDNEALIEKLKHGQFTLRDMYEQFQNIMKMGPFSQILGMIPGFGTD 358
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQVREVM 417
M KG E+ES A++K+ MT+MDSM ++ELDS++ K+ + RI R+ARGSG R+V
Sbjct: 359 FMSKGNEQESMARLKKLMTIMDSMNDQELDSTDGAKVFSKQPGRIQRVARGSGVSTRDVQ 418
Query: 418 EMLEEYKRLAKIWSKMKGLK-IPKKGEMSA-LSRNMNA---QHMSKVLPQGMLKQIGGVG 472
E+L +Y + A++ KM G+K + K G+MS +S++ A Q M+K++ +L +GG+
Sbjct: 419 ELLTQYTKFAQMVKKMGGIKGLFKGGDMSKNVSQSQMAKLNQQMAKMMDPRVLHHMGGMA 478
Query: 473 GLQNLMKQM--GSTKDMMGMFG 492
GLQ++M+Q G+ +M GM G
Sbjct: 479 GLQSMMRQFQQGAAGNMKGMMG 500
>gi|291403728|ref|XP_002718183.1| PREDICTED: signal recognition particle 54kDa isoform 1 [Oryctolagus
cuniculus]
Length = 504
Score = 588 bits (1515), Expect = e-165, Method: Compositional matrix adjust.
Identities = 290/504 (57%), Positives = 385/504 (76%), Gaps = 16/504 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNATII+E+VLN L E+ ALL+ADV KLV++++ N+K +
Sbjct: 1 MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENVKSAI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+L+++A+G NKR++IQ A+F EL K++DPG ++TP KGK +VIMFVGLQGSGKTTTC+K
Sbjct: 61 DLEEMASGLNKRKMIQHAVFKELVKLVDPGVKAWTPTKGKQNVIMFVGLQGSGKTTTCSK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY+Q+KGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGVE FK
Sbjct: 121 LAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
EN ++IIVDTSGRHKQE +LFEEM QV+ A + PD +++VMD+SIGQA QA+AFK
Sbjct: 181 NENFEIIIVDTSGRHKQEDSLFEEMLQVANA-IQPDNIVYVMDASIGQACEAQAKAFKDK 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V V +VIVTK+DGHAKGGGALSAVAATKSP+IFIGTGEH+D+FE F +PF+S+LLGMGD
Sbjct: 240 VDVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G +DK++E + +D L++KL G FTLR MYEQFQNI+KMGP Q+ M+PGF ++
Sbjct: 300 IEGLIDKVNE-LKLDDNEALIEKLKHGQFTLRDMYEQFQNIMKMGPFSQILGMIPGFGTD 358
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQVREVM 417
M KG E+ES A++K+ MT+MDSM ++ELDS++ K+ + RI R+ARGSG R+V
Sbjct: 359 FMSKGNEQESMARLKKLMTIMDSMNDQELDSTDGAKVFSKQPGRIQRVARGSGVSTRDVQ 418
Query: 418 EMLEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNA-------QHMSKVLPQGMLKQIGG 470
E+L +Y + A++ KM G+K KG+ +S N+N Q M+K++ +L +GG
Sbjct: 419 ELLTQYTKFAQMVKKMGGIKGLFKGK--KISENVNQSPDAKLNQQMAKMMDPRVLHHMGG 476
Query: 471 VGGLQNLMKQM--GSTKDMMGMFG 492
+ GLQ++M+Q G+ +M GM G
Sbjct: 477 MAGLQSMMRQFQQGAAGNMKGMMG 500
>gi|62899020|ref|NP_446323.1| signal recognition particle 54 kDa protein [Rattus norvegicus]
gi|73621950|sp|Q6AYB5.1|SRP54_RAT RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|50925703|gb|AAH79117.1| Signal recognition particle 54a [Rattus norvegicus]
Length = 504
Score = 587 bits (1513), Expect = e-165, Method: Compositional matrix adjust.
Identities = 291/502 (57%), Positives = 388/502 (77%), Gaps = 12/502 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNATII+E+VLN L E+ ALL+ADV KLV++++ N+K +
Sbjct: 1 MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENVKSAI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+L+++A+G NKR++IQ A+F EL K++DPG ++TP KGK +VIMFVGLQGSGKTTTC+K
Sbjct: 61 DLEEMASGLNKRKMIQHAVFKELVKLVDPGVKAWTPTKGKQNVIMFVGLQGSGKTTTCSK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++Q+KGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGVE FK
Sbjct: 121 LAYFYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
EN ++IIVDTSGRHKQE +LFEEM QVS A + PD +++VMD+SIGQA QA+AFK
Sbjct: 181 NENFEIIIVDTSGRHKQEDSLFEEMLQVSNA-IQPDNIVYVMDASIGQACEAQAKAFKDK 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V V +VIVTK+DGHAKGGGALSAVAATKSP+IFIGTGEH+D+FE F +PF+S+LLGMGD
Sbjct: 240 VDVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G +DK++E + +D L++KL G FTLR MYEQFQNI+KMGP Q+ M+PGF ++
Sbjct: 300 IEGLIDKVNE-LKLDDNEALIEKLKHGQFTLRDMYEQFQNIMKMGPFSQILGMIPGFGTD 358
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQVREVM 417
M KG E+ES A++K+ MT+MDSM ++ELDS++ K+ + RI R+ARGSG R+V
Sbjct: 359 FMSKGNEQESMARLKKLMTIMDSMNDQELDSTDGAKVFSKQPGRIQRVARGSGVSTRDVQ 418
Query: 418 EMLEEYKRLAKIWSKMKGLK-IPKKGEMSA-LSRNMNA---QHMSKVLPQGMLKQIGGVG 472
E+L +Y + A++ KM G+K + K G+MS +S++ A Q M+K++ +L +GG+
Sbjct: 419 ELLTQYTKFAQMVKKMGGIKGLFKGGDMSKNVSQSQMAKLNQQMAKMMDPRVLHHMGGMA 478
Query: 473 GLQNLMKQM--GSTKDMMGMFG 492
GLQ++M+Q G+ +M GM G
Sbjct: 479 GLQSMMRQFQQGAAGNMKGMMG 500
>gi|197631999|gb|ACH70723.1| signal recognition particle 54 [Salmo salar]
gi|209154348|gb|ACI33406.1| Signal recognition particle 54 kDa protein [Salmo salar]
Length = 504
Score = 587 bits (1513), Expect = e-165, Method: Compositional matrix adjust.
Identities = 293/505 (58%), Positives = 386/505 (76%), Gaps = 21/505 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNATII+E+VLN L E+ ALL+ADV KLV++++ N+K +
Sbjct: 1 MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCAALLEADVNIKLVKQLRENVKSSI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+L+++A+G NKRR+IQ ++F EL K++DPG ++TP KGK +VIMFVGLQGSGKTTTC+K
Sbjct: 61 DLEEMASGLNKRRMIQHSVFKELVKLVDPGVKAWTPTKGKNNVIMFVGLQGSGKTTTCSK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY+Q+KGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGVE FK
Sbjct: 121 LAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVVIAAEGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
E+ ++IIVDTSGRHKQE +LFEEM QVS A V PD +++VMD+SIGQA QA+AFK
Sbjct: 181 NESFEIIIVDTSGRHKQEDSLFEEMLQVSNA-VQPDNIVYVMDASIGQACEAQAKAFKDK 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V V +VIVTK+DGHAKGGGALSAVAATKSP+IFIGTGEH+D+ E F +PF+S+LLGMGD
Sbjct: 240 VEVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDLEPFKTQPFISKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G +DK++E + +D EL+ KL G FTLR MYEQFQNI+KMGP GQ+ M+PGF ++
Sbjct: 300 IEGLIDKVNE-LKLDDNEELIDKLKHGQFTLRDMYEQFQNIMKMGPFGQIMGMIPGFGTD 358
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQVREVM 417
M KG E+ES A++K+ MT+MDSM ++ELD+ + KL + +RI R+ARGSG R+V
Sbjct: 359 FMSKGNEQESMARLKKLMTIMDSMNDQELDNKDGAKLFSKGPNRIARVARGSGVATRDVQ 418
Query: 418 EMLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNA-------QHMSKVLPQGMLKQIG 469
E+L +Y + A++ KM G+K + K G+M S+N+N Q M+K++ +L +G
Sbjct: 419 ELLTQYTKFAQMVKKMGGIKGLFKGGDM---SKNVNPSQMAKLNQQMAKMMDPRVLHHMG 475
Query: 470 GVGGLQNLMKQM-----GSTKDMMG 489
G+ GLQ++M+Q G+ K MMG
Sbjct: 476 GMSGLQSMMRQFQQGAAGNAKGMMG 500
>gi|410962043|ref|XP_003987586.1| PREDICTED: signal recognition particle 54 kDa protein isoform 1
[Felis catus]
Length = 504
Score = 587 bits (1512), Expect = e-165, Method: Compositional matrix adjust.
Identities = 290/502 (57%), Positives = 388/502 (77%), Gaps = 12/502 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNATII+E+VLN L E+ ALL+ADV KLV++++ N+K +
Sbjct: 1 MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENVKSAI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+L+++A+G NKR++IQ A+F EL K++DPG ++TP KGK +VIMFVGLQGSGKTTTC+K
Sbjct: 61 DLEEMASGLNKRKMIQHAVFKELVKLVDPGVKAWTPTKGKQNVIMFVGLQGSGKTTTCSK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY+Q+KGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGV+ FK
Sbjct: 121 LAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGVDKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
EN ++IIVDTSGRHKQE +LFEEM QV+ A + PD +++VMD+SIGQA QA+AFK
Sbjct: 181 NENFEIIIVDTSGRHKQEDSLFEEMLQVANA-IQPDNIVYVMDASIGQACEAQAKAFKDK 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V V +VIVTK+DGHAKGGGALSAVAATKSP+IFIGTGEH+D+FE F +PF+S+LLGMGD
Sbjct: 240 VDVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G +DK++E + +D L++KL G FTLR MYEQFQNI+KMGP Q+ M+PGF ++
Sbjct: 300 IEGLIDKVNE-LKLDDNEALIEKLKHGQFTLRDMYEQFQNIMKMGPFSQILGMIPGFGTD 358
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQVREVM 417
M KG E+ES A++K+ MT+MDSM ++ELDS++ K+ + RI R+ARGSG R+V
Sbjct: 359 FMSKGNEQESMARLKKLMTIMDSMNDQELDSTDGAKVFSKQPGRIQRVARGSGVSTRDVQ 418
Query: 418 EMLEEYKRLAKIWSKMKGLK-IPKKGEMSA-LSRNMNA---QHMSKVLPQGMLKQIGGVG 472
E+L +Y + A++ KM G+K + K G+MS +S++ A Q M+K++ +L +GG+
Sbjct: 419 ELLTQYTKFAQMVKKMGGIKGLFKGGDMSKNVSQSQMAKLNQQMAKMMDPRVLHHMGGMA 478
Query: 473 GLQNLMKQM--GSTKDMMGMFG 492
GLQ++M+Q G+ +M GM G
Sbjct: 479 GLQSMMRQFQQGAAGNMKGMMG 500
>gi|410962045|ref|XP_003987587.1| PREDICTED: signal recognition particle 54 kDa protein isoform 2
[Felis catus]
Length = 526
Score = 586 bits (1510), Expect = e-165, Method: Compositional matrix adjust.
Identities = 290/502 (57%), Positives = 388/502 (77%), Gaps = 12/502 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNATII+E+VLN L E+ ALL+ADV KLV++++ N+K +
Sbjct: 23 MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENVKSAI 82
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+L+++A+G NKR++IQ A+F EL K++DPG ++TP KGK +VIMFVGLQGSGKTTTC+K
Sbjct: 83 DLEEMASGLNKRKMIQHAVFKELVKLVDPGVKAWTPTKGKQNVIMFVGLQGSGKTTTCSK 142
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY+Q+KGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGV+ FK
Sbjct: 143 LAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGVDKFK 202
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
EN ++IIVDTSGRHKQE +LFEEM QV+ A + PD +++VMD+SIGQA QA+AFK
Sbjct: 203 NENFEIIIVDTSGRHKQEDSLFEEMLQVANA-IQPDNIVYVMDASIGQACEAQAKAFKDK 261
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V V +VIVTK+DGHAKGGGALSAVAATKSP+IFIGTGEH+D+FE F +PF+S+LLGMGD
Sbjct: 262 VDVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLLGMGD 321
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G +DK++E + +D L++KL G FTLR MYEQFQNI+KMGP Q+ M+PGF ++
Sbjct: 322 IEGLIDKVNE-LKLDDNEALIEKLKHGQFTLRDMYEQFQNIMKMGPFSQILGMIPGFGTD 380
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQVREVM 417
M KG E+ES A++K+ MT+MDSM ++ELDS++ K+ + RI R+ARGSG R+V
Sbjct: 381 FMSKGNEQESMARLKKLMTIMDSMNDQELDSTDGAKVFSKQPGRIQRVARGSGVSTRDVQ 440
Query: 418 EMLEEYKRLAKIWSKMKGLK-IPKKGEMSA-LSRNMNA---QHMSKVLPQGMLKQIGGVG 472
E+L +Y + A++ KM G+K + K G+MS +S++ A Q M+K++ +L +GG+
Sbjct: 441 ELLTQYTKFAQMVKKMGGIKGLFKGGDMSKNVSQSQMAKLNQQMAKMMDPRVLHHMGGMA 500
Query: 473 GLQNLMKQM--GSTKDMMGMFG 492
GLQ++M+Q G+ +M GM G
Sbjct: 501 GLQSMMRQFQQGAAGNMKGMMG 522
>gi|54194|emb|CAA34386.1| unnamed protein product [Mus musculus]
Length = 504
Score = 586 bits (1510), Expect = e-164, Method: Compositional matrix adjust.
Identities = 291/502 (57%), Positives = 387/502 (77%), Gaps = 12/502 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNATII+E+VLN L E+ ALL+ADV KLV++++ N+K +
Sbjct: 1 MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENVKSAI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+L+++A+G NKR++IQ A+F EL K++DPG ++TP KGK +VIMFVGLQGSGKTTTC+K
Sbjct: 61 DLEEMASGLNKRKMIQHAVFKELVKLVDPGVKAWTPTKGKQNVIMFVGLQGSGKTTTCSK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY+Q+KGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGVE FK
Sbjct: 121 LAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
EN ++IIVDTSGRHKQE +LFEE QVS A + PD +++VMD+SIGQA QA+AFK
Sbjct: 181 NENFEIIIVDTSGRHKQEDSLFEERLQVSNA-IQPDNIVYVMDASIGQACEAQAKAFKDK 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V V +VIVTK+DGHAKGGGALSAVAATKSP+IFIGTGEH+D+FE F +PF+S+LLGMGD
Sbjct: 240 VDVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G +DK++E + +D L++KL G FTLR MYEQFQNI+KMGP Q+ M+PGF ++
Sbjct: 300 IEGLIDKVNE-LKLDDNEALIEKLKHGQFTLRDMYEQFQNIMKMGPFSQILGMIPGFGTD 358
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQVREVM 417
M KG E+ES A++K+ MT+MDSM ++ELDS++ K+ + RI R+ARGSG R+V
Sbjct: 359 FMSKGNEQESMARLKKLMTIMDSMNDQELDSTDGAKVFSKQPGRIQRVARGSGVSTRDVQ 418
Query: 418 EMLEEYKRLAKIWSKMKGLK-IPKKGEMSA-LSRNMNA---QHMSKVLPQGMLKQIGGVG 472
E+L +Y + A++ KM G+K + K G+MS +S++ A Q M+K++ +L +GG+
Sbjct: 419 ELLTQYTKFAQMVKKMGGIKGLFKGGDMSKNVSQSQMAKLNQQMAKMMDPRVLHHMGGMA 478
Query: 473 GLQNLMKQM--GSTKDMMGMFG 492
GLQ++M+Q G+ +M GM G
Sbjct: 479 GLQSMMRQFQQGAAGNMKGMMG 500
>gi|355721868|gb|AES07403.1| signal recognition particle 54kDa [Mustela putorius furo]
Length = 502
Score = 586 bits (1510), Expect = e-164, Method: Compositional matrix adjust.
Identities = 290/501 (57%), Positives = 387/501 (77%), Gaps = 12/501 (2%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
VLA LG I+ A++ +SNATII+E+VLN L E+ ALL+ADV KLV++++ N+K ++
Sbjct: 1 VLADLGRKITSALRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENVKSAID 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
L+++A+G NKR++IQ A+F EL K++DPG ++TP KGK +VIMFVGLQGSGKTTTC+K
Sbjct: 61 LEEMASGLNKRKMIQHAVFKELVKLVDPGVKAWTPTKGKQNVIMFVGLQGSGKTTTCSKL 120
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKK 181
AYY+Q+KGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGVE FK
Sbjct: 121 AYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGVEKFKN 180
Query: 182 ENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSV 241
EN ++IIVDTSGRHKQE +LFEEM QV+ A + PD +++VMD+SIGQA QA+AFK V
Sbjct: 181 ENFEIIIVDTSGRHKQEDSLFEEMLQVANA-IQPDNIVYVMDASIGQACEAQAKAFKDKV 239
Query: 242 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 301
V +VIVTK+DGHAKGGGALSAVAATKSP+IFIGTGEH+D+FE F +PF+S+LLGMGD
Sbjct: 240 DVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLLGMGDI 299
Query: 302 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 361
G +DK++E + +D L++KL G FTLR MYEQFQNI+KMGP Q+ M+PGF ++
Sbjct: 300 EGLIDKVNE-LKLDDNEALIEKLKHGQFTLRDMYEQFQNIMKMGPFSQILGMIPGFGTDF 358
Query: 362 MPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQVREVME 418
M KG E+ES A++K+ MT+MDSM ++ELDS++ K+ + RI R+ARGSG R+V E
Sbjct: 359 MSKGNEQESMARLKKLMTIMDSMNDQELDSTDGAKVFSKQPGRIQRVARGSGVSTRDVQE 418
Query: 419 MLEEYKRLAKIWSKMKGLK-IPKKGEMSA-LSRNMNA---QHMSKVLPQGMLKQIGGVGG 473
+L +Y + A++ KM G+K + K G+MS +S++ A Q M+K++ +L +GG+ G
Sbjct: 419 LLTQYTKFAQMVKKMGGIKGLFKGGDMSKNVSQSQMAKLNQQMAKMMDPRVLHHMGGMAG 478
Query: 474 LQNLMKQM--GSTKDMMGMFG 492
LQ++M+Q G+ +M GM G
Sbjct: 479 LQSMMRQFQQGAAGNMKGMMG 499
>gi|153791464|ref|NP_001093580.1| signal recognition particle 54C [Mus musculus]
Length = 504
Score = 585 bits (1509), Expect = e-164, Method: Compositional matrix adjust.
Identities = 289/502 (57%), Positives = 386/502 (76%), Gaps = 12/502 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNATII+E+VLN L E+ ALL+ADV KLV++++ N+K +
Sbjct: 1 MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENVKSAI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+L+++A+G NKR++IQ A+F EL K++DPG ++TP KGK +VIMFVGLQGSGKTTTC+K
Sbjct: 61 DLEEMASGLNKRKMIQHAVFKELVKLVDPGVKAWTPTKGKQNVIMFVGLQGSGKTTTCSK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY+Q+KGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGVE FK
Sbjct: 121 LAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
EN ++IIVDTSGRHKQE +LFEEM QVS A + PD +++VMD+SIGQA QA+AFK
Sbjct: 181 NENFEIIIVDTSGRHKQEDSLFEEMLQVSNA-IQPDNIVYVMDASIGQACEAQAKAFKDK 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V V +VIVTK+DGHAKGGGALSAVAATKSP+IFIGTGEH+D+FE F +PF+S+LLGMGD
Sbjct: 240 VDVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G +DK++E + +D L++K G FTLR MYEQFQNI+KMGP Q+ M+PGF ++
Sbjct: 300 IEGLIDKVNE-LKLDDNKALIEKWKHGQFTLRDMYEQFQNIMKMGPFSQILGMIPGFGTD 358
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLM---NDSRIMRIARGSGRQVREVM 417
M KG E+ES A++K+ MT+MDSM ++ELDS++ + + RI R+ARGSG R++
Sbjct: 359 FMSKGNEQESMARLKKLMTIMDSMNDQELDSTDGAKVFSKHPGRIQRVARGSGVSTRDIQ 418
Query: 418 EMLEEYKRLAKIWSKMKGLK-IPKKGEMSA-LSRNMNA---QHMSKVLPQGMLKQIGGVG 472
E+L +Y + A++ KM G+K + K G+MS +S++ A Q M+K++ +L +GG+
Sbjct: 419 ELLTQYTKFAQMVKKMGGIKGLFKGGDMSKNVSQSQMAKLNQQMAKMMDPRVLHHMGGMA 478
Query: 473 GLQNLMKQM--GSTKDMMGMFG 492
GLQ++M+Q G+ +M GM G
Sbjct: 479 GLQSMMRQFQQGAAGNMKGMMG 500
>gi|343960623|dbj|BAK61901.1| signal recognition particle 54 kDa protein [Pan troglodytes]
Length = 504
Score = 585 bits (1507), Expect = e-164, Method: Compositional matrix adjust.
Identities = 290/502 (57%), Positives = 387/502 (77%), Gaps = 12/502 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNATII+E+VLN L E+ ALL+ADV KLV++++ N+K +
Sbjct: 1 MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENVKSAI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+L+++A+G NKR++IQ A+F EL K++DPG ++TP KGK +VIMFVGLQGSGKTTTC+K
Sbjct: 61 DLEEMASGLNKRKMIQHAVFKELVKLVDPGVKAWTPTKGKQNVIMFVGLQGSGKTTTCSK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A Y+Q+KGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGVE FK
Sbjct: 121 LASYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
EN ++IIVDTSGRHKQE +LFEEM QV+ A + PD +++VMD+SIGQA QA+AFK
Sbjct: 181 NENFEIIIVDTSGRHKQEDSLFEEMLQVANA-IQPDNIVYVMDASIGQACEAQAKAFKDK 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V V +VIVTK+DGHAKGGGALSAVAATKSP+IFIGTGEH+D+FE F +PF+S+LLGMGD
Sbjct: 240 VDVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G +DK++E + +D L++KL G FTLR MYEQFQNI+KMGP Q+ M+PGF ++
Sbjct: 300 IEGLIDKVNE-LKLDNNEALIEKLKHGQFTLRDMYEQFQNIMKMGPFSQILGMIPGFGTD 358
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQVREVM 417
M KG E+ES A++K+ MT+MDSM ++ELDS++ K+ + RI R+ARGSG R+V
Sbjct: 359 FMSKGNEQESMARLKKLMTIMDSMNDQELDSTDGAKVFSKQPGRIQRVARGSGVSTRDVQ 418
Query: 418 EMLEEYKRLAKIWSKMKGLK-IPKKGEMSA-LSRNMNA---QHMSKVLPQGMLKQIGGVG 472
E+L +Y + A++ KM G+K + K G+MS +S++ A Q M+K++ +L +GG+
Sbjct: 419 ELLTQYTKFAQMVKKMGGIKGLFKGGDMSKNVSQSQMAKLNQQMAKMMDPRVLHHMGGMA 478
Query: 473 GLQNLMKQM--GSTKDMMGMFG 492
GLQ++M+Q G+ +M GM G
Sbjct: 479 GLQSMMRQFQQGAAGNMKGMMG 500
>gi|50748422|ref|XP_421238.1| PREDICTED: signal recognition particle 54 kDa protein isoform 2
[Gallus gallus]
gi|224051427|ref|XP_002200552.1| PREDICTED: signal recognition particle 54 kDa protein [Taeniopygia
guttata]
Length = 504
Score = 585 bits (1507), Expect = e-164, Method: Compositional matrix adjust.
Identities = 288/505 (57%), Positives = 387/505 (76%), Gaps = 18/505 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNATII+E+VLN L E+ ALL+ADV KLV++++ N+K +
Sbjct: 1 MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENVKSAI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+L+++A+G NKR++IQ A+F EL K++DPG ++TP KGK ++IMFVGLQGSGKTTTC+K
Sbjct: 61 DLEEMASGLNKRKMIQHAVFKELVKLVDPGVKAWTPTKGKQNIIMFVGLQGSGKTTTCSK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++Q+KGWK L+CADT+RAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGVE FK
Sbjct: 121 LAYFYQRKGWKTCLICADTYRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
EN ++IIVDTSGRHKQE +LFEEM QV+ A + PD +++VMD+SIGQA QA+AFK
Sbjct: 181 NENFEIIIVDTSGRHKQEDSLFEEMLQVANA-IQPDNIVYVMDASIGQACEAQAKAFKDK 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V V +VIVTK+DGHAKGGGALSAVAATKSP+IFIGTGEH+D+FE F +PF+S+LLGMGD
Sbjct: 240 VDVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G +DK++E + +D L++KL G FTLR MYEQFQNI+KMGP Q+ M+PGF ++
Sbjct: 300 IEGLIDKVNE-LKLDDNEALIEKLKHGQFTLRDMYEQFQNIMKMGPFSQILGMIPGFGTD 358
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQVREVM 417
M KG E+ES A++K+ MT+MDSM ++ELDS++ K+ + RI R+ARGSG R+V
Sbjct: 359 FMSKGNEQESMARLKKLMTIMDSMNDQELDSTDGAKVFSKQPGRIQRVARGSGVSTRDVQ 418
Query: 418 EMLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNA-------QHMSKVLPQGMLKQIG 469
E+L +Y + A++ KM G+K + K G+M S+N+N Q M+K++ +L +G
Sbjct: 419 ELLTQYTKFAQMVKKMGGIKGLFKGGDM---SKNVNPSQLAKLNQQMAKMMDPRVLHHMG 475
Query: 470 GVGGLQNLMKQM--GSTKDMMGMFG 492
G+ GLQ++M+Q G+ +M GM G
Sbjct: 476 GMAGLQSMMRQFQQGAAGNMKGMMG 500
>gi|348572227|ref|XP_003471895.1| PREDICTED: LOW QUALITY PROTEIN: signal recognition particle 54 kDa
protein-like [Cavia porcellus]
Length = 504
Score = 584 bits (1506), Expect = e-164, Method: Compositional matrix adjust.
Identities = 290/502 (57%), Positives = 387/502 (77%), Gaps = 12/502 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNATII+E+VLN L E+ ALL+ADV KLV++++ N+K +
Sbjct: 1 MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENVKSAL 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+L+++A+G NK ++IQ A+F EL K++DPG ++TP KGK +VIMFVGLQGSGKTTTC+K
Sbjct: 61 DLEEMASGLNKXKMIQHAVFKELVKLVDPGVKAWTPTKGKQNVIMFVGLQGSGKTTTCSK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY+Q+KGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGVE FK
Sbjct: 121 LAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
EN ++IIVDTSGRHKQE +LFEEM QV+ A + PD +++VMD+SIGQA QA+AFK
Sbjct: 181 NENFEIIIVDTSGRHKQEDSLFEEMLQVANA-IQPDNIVYVMDASIGQACEAQAKAFKDK 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V V +VIVTK+DGHAKGGGALSAVAATKSP+IFIGTGEH+D+FE F +PF+S+LLGMGD
Sbjct: 240 VDVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G +DK++E + +D L++KL G FTLR MYEQFQNI+KMGP Q+ M+PGF ++
Sbjct: 300 IEGLIDKVNE-LKLDDNEALIEKLKHGQFTLRDMYEQFQNIMKMGPFSQILGMIPGFGTD 358
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQVREVM 417
M KG E+ES A++K+ MT+MDSM ++ELDS++ K+ + RI R+ARGSG R+V
Sbjct: 359 FMSKGNEQESMARLKKLMTIMDSMNDQELDSTDGAKVFSKQPGRIQRVARGSGVSTRDVQ 418
Query: 418 EMLEEYKRLAKIWSKMKGLK-IPKKGEMSA-LSRNMNA---QHMSKVLPQGMLKQIGGVG 472
E+L +Y + A++ KM G+K + K G+MS +S++ A Q M+K++ +L +GG+
Sbjct: 419 ELLTQYTKFAQMVKKMGGIKGLFKGGDMSKNVSQSQMAKLNQQMAKMMDPRVLHHMGGMA 478
Query: 473 GLQNLMKQM--GSTKDMMGMFG 492
GLQ++M+Q G+ +M GM G
Sbjct: 479 GLQSMMRQFQQGAAGNMKGMMG 500
>gi|307183983|gb|EFN70554.1| Signal recognition particle 54 kDa protein [Camponotus floridanus]
Length = 506
Score = 584 bits (1506), Expect = e-164, Method: Compositional matrix adjust.
Identities = 290/509 (56%), Positives = 388/509 (76%), Gaps = 21/509 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNAT+I+E+VLN L EI ALL+ADV +LV++++ N+++++
Sbjct: 1 MVLADLGRKITSALRSLSNATVINEEVLNSMLKEICAALLEADVNIRLVKKLRENVRQVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ +D+A G NKRR+IQ A+F EL K++DPG ++ P KG+P+VIMFVGLQGSGKTT+CTK
Sbjct: 61 DFEDMAGGLNKRRMIQSAVFKELVKLIDPGVKAYQPVKGRPNVIMFVGLQGSGKTTSCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++ KK WK LVCADTFRAGA+DQ+KQNATKA+IPFYGSYTE DPV IA +GV+ FK
Sbjct: 121 LAYHYLKKNWKACLVCADTFRAGAYDQIKQNATKARIPFYGSYTEVDPVAIAQDGVDMFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KE ++IIVDTSGRHKQE +LFEEM QV+ A V PD +IFVMD++IGQA QA+AFK+
Sbjct: 181 KEGYEIIIVDTSGRHKQEESLFEEMLQVANA-VQPDNIIFVMDATIGQACEAQAKAFKER 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V+VG++I+TK+DGHAKGGGALSAVAAT+SPVIF+GTGEH+D+ E F KPF+S+LLGMGD
Sbjct: 240 VNVGSIIITKLDGHAKGGGALSAVAATQSPVIFVGTGEHIDDLEPFKTKPFISKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G +DK++E + +D ELL+K+ G FTLR MYEQFQNI+KMGP Q+ M+PGFS +
Sbjct: 300 IEGLIDKVNE-LNLDDNEELLEKIKHGQFTLRDMYEQFQNIMKMGPFSQLMGMIPGFSQD 358
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQVREVM 417
M KG E+ES A++KR MT+MDSM + ELDS + KL + RIMR+ARGSG +EV
Sbjct: 359 FMSKGTEQESMARLKRLMTIMDSMNDSELDSRDGAKLFSKQPGRIMRVARGSGVTEKEVK 418
Query: 418 EMLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQ-------GMLKQIG 469
+++ +Y + A + KM G+K + K G+M ++N+N M+K+ Q +L Q+G
Sbjct: 419 DLITQYTKFAAVVKKMGGIKGLFKAGDM---AKNVNPTQMAKLNHQMAKMMDPRVLHQMG 475
Query: 470 GVGGLQNLMKQM-----GSTKDMMGMFGG 493
G+ GLQN+MKQ+ G ++MG FGG
Sbjct: 476 GMPGLQNIMKQLQQGAAGGLGNLMGGFGG 504
>gi|307199091|gb|EFN79801.1| Signal recognition particle 54 kDa protein [Harpegnathos saltator]
Length = 506
Score = 584 bits (1505), Expect = e-164, Method: Compositional matrix adjust.
Identities = 290/509 (56%), Positives = 388/509 (76%), Gaps = 21/509 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNAT+I+E+VLN L EI ALL+ADV +LV++++ N+++++
Sbjct: 1 MVLADLGRKITSALRSLSNATVINEEVLNSMLKEICAALLEADVNIRLVKKLRENVRQVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ +D+A G NKRR+IQ A+F EL K++DPG ++ P KG+P+VIMFVGLQGSGKTTTCTK
Sbjct: 61 DFEDMAGGLNKRRMIQSAVFKELVKLIDPGVKAYQPVKGRPNVIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++ KK WK LVCADTFRAGA+DQ+KQNATKA+IPFYGSYTE DPV IA +GV+ FK
Sbjct: 121 LAYHYLKKNWKACLVCADTFRAGAYDQIKQNATKARIPFYGSYTEVDPVTIAQDGVDMFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KE ++IIVDTSGRHKQE +LFEEM QV+ A V PD +IFVMD++IGQA QA+AFK+
Sbjct: 181 KEGYEIIIVDTSGRHKQEESLFEEMLQVANA-VQPDNIIFVMDATIGQACEAQAKAFKER 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V+VG++I+TK+DGHAKGGGALSAVAAT+SPVIF+GTGEH+D+ E F KPF+S+LLGMGD
Sbjct: 240 VNVGSIIITKLDGHAKGGGALSAVAATQSPVIFVGTGEHIDDLEPFKTKPFISKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G +DK++E + +D ELL+K+ G FTLR MYEQFQNI+KMGP Q+ M+PGFS +
Sbjct: 300 IEGLIDKVNE-LNLDDNEELLEKIKHGQFTLRDMYEQFQNIMKMGPFSQLMGMIPGFSQD 358
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQVREVM 417
M KG E+ES A++KR MT+MDSM + ELDS + KL + RI+R+ARGSG +EV
Sbjct: 359 FMSKGTEQESMARLKRLMTIMDSMNDSELDSRDGAKLFSKQPGRIVRVARGSGVTEKEVK 418
Query: 418 EMLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQ-------GMLKQIG 469
+++ +Y + A + KM G+K + K G+M ++N+N M+K+ Q +L Q+G
Sbjct: 419 DLITQYTKFAAVVKKMGGIKGLFKAGDM---AKNVNPTQMAKLNHQMAKMMDPRVLHQMG 475
Query: 470 GVGGLQNLMKQM-----GSTKDMMGMFGG 493
G+ GLQN+MKQ+ G ++MG FGG
Sbjct: 476 GMPGLQNIMKQLQQGAAGGLGNLMGGFGG 504
>gi|242038763|ref|XP_002466776.1| hypothetical protein SORBIDRAFT_01g014030 [Sorghum bicolor]
gi|241920630|gb|EER93774.1| hypothetical protein SORBIDRAFT_01g014030 [Sorghum bicolor]
Length = 476
Score = 583 bits (1503), Expect = e-164, Method: Compositional matrix adjust.
Identities = 311/489 (63%), Positives = 386/489 (78%), Gaps = 21/489 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL+QL GS+ A+ +M NAT++D+KVL++CLNEI+RALLQADV+F+ VR +Q IK V
Sbjct: 1 MVLSQLSGSLKGALSRMCNATLVDQKVLDDCLNEISRALLQADVRFETVRRVQATIKSTV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKG-KP-SVIMFVGLQGSGKTTTC 118
NL LA G NKRR+I +A+ EL + LDPGKPSF P KG KP SV+MFVGLQGSGKTTTC
Sbjct: 61 NLQALADGTNKRRVIHRAVVAELRRTLDPGKPSFAPTKGRKPASVVMFVGLQGSGKTTTC 120
Query: 119 TKYAYYHQK-KGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVE 177
KYA YH++ KG PALVCADTFRAGAFDQLKQNATKA IPFYGS+TESDPV++AVEGV+
Sbjct: 121 VKYADYHRRHKGLSPALVCADTFRAGAFDQLKQNATKAGIPFYGSHTESDPVKVAVEGVD 180
Query: 178 TFKKEN-CDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQA 236
F+ E+ CDLI+VDTSGRH+QEAAL EEMRQV++AT PDLV+FVMD+SIGQAAF QAQA
Sbjct: 181 RFRDEDACDLIVVDTSGRHRQEAALLEEMRQVADAT-RPDLVVFVMDASIGQAAFQQAQA 239
Query: 237 FKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLL 296
F+QS VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEH+ + E FD K FVSRLL
Sbjct: 240 FRQSTPVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHIPDLEAFDAKSFVSRLL 299
Query: 297 GMGDWSGFMDKIHEVVPMDQQP--ELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSML 354
G+GD SG MDK+H + D + ++L++L++ NFTLR + + F+ +L MGP+GQ+ SM+
Sbjct: 300 GLGDLSGLMDKMHGIPAYDNRSPYQILEELTKENFTLRALRKLFRAMLSMGPLGQLVSMI 359
Query: 355 PGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVR 414
PG S+ + EKE AK+KRYMTMMDSMT+ ELD ++ KLMN SRI R+ARGSGR VR
Sbjct: 360 PGLISD---RFSEKEGHAKMKRYMTMMDSMTDAELDGTSTKLMNQSRIKRVARGSGRPVR 416
Query: 415 EVMEMLEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQIGGVGGL 474
+V++MLEE+KR+AK+ SK+ +K P + + +PQ +L Q GG GL
Sbjct: 417 DVVDMLEEHKRMAKMMSKLPNVKRPN-----------DINTLVNAIPQPLLNQFGGKFGL 465
Query: 475 QNLMKQMGS 483
Q+L++QMG+
Sbjct: 466 QSLIRQMGA 474
>gi|383847489|ref|XP_003699385.1| PREDICTED: signal recognition particle 54 kDa protein-like
[Megachile rotundata]
Length = 506
Score = 583 bits (1503), Expect = e-164, Method: Compositional matrix adjust.
Identities = 289/509 (56%), Positives = 387/509 (76%), Gaps = 21/509 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNAT+I+E+VLN L EI ALL+ADV +LV++++ N++ ++
Sbjct: 1 MVLADLGRKITSALRSLSNATVINEEVLNSMLKEICAALLEADVNIRLVKKLRENVRLVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ DD+A G NKRR+IQ A+F EL K++DPG ++ P KG+ +VIMFVGLQGSGKTTTCTK
Sbjct: 61 DFDDMAGGLNKRRMIQSAVFKELVKLIDPGVKAYQPIKGRSNVIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++ KK WK LVCADTFRAGA+DQ+KQNATKA+IPFYGSYTE DPV IA +GVE FK
Sbjct: 121 LAYHYLKKNWKACLVCADTFRAGAYDQIKQNATKARIPFYGSYTEVDPVAIAQDGVEMFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KE ++IIVDTSGRHKQE +LFEEM QV+ A + PD +IFVMD++IGQA QA+AFK+
Sbjct: 181 KEGYEIIIVDTSGRHKQEESLFEEMLQVANA-IQPDNIIFVMDATIGQACEAQAKAFKER 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V+VG++I+TK+DGHAKGGGALSAVAAT+SPVIF+GTGEH+D+ E F KPF+S+LLGMGD
Sbjct: 240 VNVGSIIITKLDGHAKGGGALSAVAATQSPVIFVGTGEHIDDLEPFKTKPFISKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G +DK++E + +D ELL+K+ G FTLR MYEQFQNI+KMGP Q+ M+PGFS +
Sbjct: 300 IEGLIDKVNE-LNLDDNEELLEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFSQD 358
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQVREVM 417
MPKG E+ES ++KR MT+MDSM + ELD+ + KL + RI+R+A+GSG +EV
Sbjct: 359 FMPKGTEQESVVRLKRLMTIMDSMNDSELDNRDGAKLFSKQPGRIVRVAQGSGVTEKEVK 418
Query: 418 EMLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQ-------GMLKQIG 469
+++ +Y + A + KM G+K + K G+M S+N+N+ M+K+ Q +L Q+G
Sbjct: 419 DLITQYTKFAAVVKKMGGIKGLFKAGDM---SKNVNSTQMAKLNHQMAKMMDPRVLHQMG 475
Query: 470 GVGGLQNLMKQM-----GSTKDMMGMFGG 493
G+ GLQN+MKQ+ G ++MG FGG
Sbjct: 476 GMPGLQNIMKQLQQGTAGGLGNLMGGFGG 504
>gi|321462130|gb|EFX73155.1| hypothetical protein DAPPUDRAFT_325390 [Daphnia pulex]
Length = 506
Score = 583 bits (1502), Expect = e-164, Method: Compositional matrix adjust.
Identities = 285/492 (57%), Positives = 378/492 (76%), Gaps = 16/492 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNAT+I+E+VLN L EI ALL++DV +LV++++ N+K ++
Sbjct: 1 MVLADLGRKITSALRSLSNATVINEEVLNAMLKEICAALLESDVNIRLVKQLRENVKSVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ DD+A G NKRR+IQ A+F EL K++DPG + P KG+P+VIMFVGLQGSGKTTTCTK
Sbjct: 61 DFDDMAGGLNKRRMIQSAVFKELIKLVDPGVKPYQPVKGRPNVIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++ KKGWK LVCADTFRAGA+DQLKQNATKA+IPFYGSYTE DPV IA EGV+ FK
Sbjct: 121 LAYHYMKKGWKSCLVCADTFRAGAYDQLKQNATKARIPFYGSYTEVDPVVIAQEGVDMFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
EN + I+VDTSGRHKQE +LFEEM QVS A V PD +IFVMD+SIGQA QA+AFK+
Sbjct: 181 AENFEFIVVDTSGRHKQEDSLFEEMLQVSNA-VKPDNIIFVMDASIGQACEAQARAFKEK 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V VG+VI+TK+DGHAKGGGALSAVAAT+SPVIFIGTGEH+D+ E F KPF+S+LLG+GD
Sbjct: 240 VDVGSVIITKLDGHAKGGGALSAVAATQSPVIFIGTGEHIDDLESFKTKPFISKLLGLGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G +DK++E + +D EL++K+ G FTLR MYEQF NI+KMGP Q+ M+PGFS +
Sbjct: 300 IEGLIDKVNE-LKLDDNEELIEKIKHGQFTLRDMYEQFTNIMKMGPFSQIMGMIPGFSQD 358
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQVREVM 417
M KG E+ES A++K+ MT+MDSM + ELD + KL + +R+ R+ARGSG REV
Sbjct: 359 FMTKGGEQESMARLKKLMTIMDSMNDSELDHQDGAKLFSKQPTRMARVARGSGVTEREVK 418
Query: 418 EMLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNA-------QHMSKVLPQGMLKQIG 469
E++ +Y + A + KM G+K + K G+M ++N+N Q M++++ +L+++G
Sbjct: 419 ELISQYTKFAAVVKKMGGIKGLFKGGDM---TKNVNPTQMAKLNQQMARMMDPSVLQRMG 475
Query: 470 GVGGLQNLMKQM 481
G+GGLQN+M+Q+
Sbjct: 476 GMGGLQNMMRQL 487
>gi|242033617|ref|XP_002464203.1| hypothetical protein SORBIDRAFT_01g014055 [Sorghum bicolor]
gi|241918057|gb|EER91201.1| hypothetical protein SORBIDRAFT_01g014055 [Sorghum bicolor]
Length = 471
Score = 582 bits (1499), Expect = e-163, Method: Compositional matrix adjust.
Identities = 311/484 (64%), Positives = 384/484 (79%), Gaps = 21/484 (4%)
Query: 6 LGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDL 65
L GS+ A+ +M NAT++D+KVL++CLNEI+RALLQADV+F+ VR +Q +IK VNL L
Sbjct: 1 LSGSLKGALSRMCNATLVDQKVLDDCLNEISRALLQADVRFETVRRVQASIKSTVNLQAL 60
Query: 66 AAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKG-KP-SVIMFVGLQGSGKTTTCTKYAY 123
A G NKRR+I +A+ EL + LDPGKPSF P KG KP SV+MFVGLQGSGKTTTC KYA
Sbjct: 61 ADGTNKRRVIHRAVVAELRRTLDPGKPSFAPTKGRKPASVVMFVGLQGSGKTTTCVKYAD 120
Query: 124 YHQK-KGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKE 182
YH++ KG PALVCADTFRAGAFDQLKQNATKA IPFYGS+TESDPV++AVEGV+ F+ E
Sbjct: 121 YHRRHKGLSPALVCADTFRAGAFDQLKQNATKAGIPFYGSHTESDPVKVAVEGVDRFRNE 180
Query: 183 N-CDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSV 241
+ CDLI+VDTSGRH+QEAAL EEMRQV++AT PDLV+FVMD+SIGQAAF QAQAF+QS
Sbjct: 181 DACDLIVVDTSGRHRQEAALLEEMRQVADAT-RPDLVVFVMDASIGQAAFQQAQAFRQSA 239
Query: 242 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 301
VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEH+ + E FD K FVSRLLG+GD
Sbjct: 240 PVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHIPDLEAFDAKSFVSRLLGLGDL 299
Query: 302 SGFMDKIHEVVPMDQQP--ELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSS 359
SG M+KIH V D + ++L++L++ NFTLR + + F+ +L MGP+GQ+ SM+PG S
Sbjct: 300 SGLMEKIHGVPADDNRSPYQILEELTKENFTLRALRKLFRAMLSMGPLGQLVSMIPGLIS 359
Query: 360 ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEM 419
+ + EKE QAK+KRYMTMMDSMT+ ELD ++ KLMN SRI R+ARGSGR VREV++M
Sbjct: 360 D---RFSEKEGQAKMKRYMTMMDSMTDAELDGTSTKLMNKSRINRVARGSGRPVREVVDM 416
Query: 420 LEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQIGGVGGLQNLMK 479
LEE+KR+AK+ SK+ +K P + H+ +PQ +L Q GG GLQ+L++
Sbjct: 417 LEEHKRMAKMMSKLPNVKRPN-----------DINHLVNAIPQPLLNQFGGNFGLQSLIR 465
Query: 480 QMGS 483
QMG+
Sbjct: 466 QMGA 469
>gi|198432537|ref|XP_002131641.1| PREDICTED: similar to signal recognition particle 54 [Ciona
intestinalis]
Length = 497
Score = 580 bits (1496), Expect = e-163, Method: Compositional matrix adjust.
Identities = 294/490 (60%), Positives = 383/490 (78%), Gaps = 15/490 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNATII+E+VL L+EI RALL++DV +LV++++ N++ +
Sbjct: 1 MVLADLGRKINNALRSLSNATIINEEVLQSMLSEICRALLESDVNIRLVKKLRENVRSAI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ D++A+G NKR++IQ A+F EL K++DPG ++ P KGKP+VIMFVGLQGSGKTTTCTK
Sbjct: 61 DFDEMASGLNKRKMIQSAVFRELVKLVDPGVKAWQPTKGKPNVIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY+Q+K WK L+CADTFRAGAFDQLKQNATKA+IPFYGSYTE+DPV IA EGVETFK
Sbjct: 121 LAYYYQRKNWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEADPVVIASEGVETFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
+EN ++IIVDTSGRHKQE +LFEEM QV A V PD VIFVMD+SIGQA QA+AFK+
Sbjct: 181 EENFEIIIVDTSGRHKQEDSLFEEMLQVYNA-VAPDNVIFVMDASIGQACEGQARAFKEK 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V V +VIVTK+DGHAKGGGALSAVAAT+SP+IFIGTGEH+D+FE+F +PFV +LL MGD
Sbjct: 240 VDVASVIVTKLDGHAKGGGALSAVAATQSPIIFIGTGEHIDDFEMFKTQPFVRKLLNMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G +DK++E + +D ELL KL G FTLR MYEQFQNI+KMGP Q+ SM+PGF ++
Sbjct: 300 IEGLIDKVNE-LKLDDNEELLDKLKHGQFTLRDMYEQFQNIMKMGPFSQIMSMIPGF-ND 357
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLM--NDSRIMRIARGSGRQVREVM 417
M KG EK+S ++KR MT+MDSMT+EELD + KL N SR+ R+ARGSG +EV
Sbjct: 358 FMTKGHEKDSTERLKRLMTIMDSMTDEELDHKDGAKLFSKNPSRVARVARGSGTLPKEVN 417
Query: 418 EMLEEYKRLAKIWSKMKGLK-IPKKGEM------SALSRNMNAQHMSKVLPQGMLKQIGG 470
E+L ++ + A++ KM G+K + K G M S ++R +N Q M+K++ +L+Q+GG
Sbjct: 418 ELLGQHGKFAQMVKKMGGMKGLFKPGGMDKNVNPSQMAR-LNGQ-MAKLMDPRVLQQMGG 475
Query: 471 VGGLQNLMKQ 480
+ GLQN+M+Q
Sbjct: 476 MNGLQNMMRQ 485
>gi|58386979|ref|XP_315212.2| AGAP004610-PA [Anopheles gambiae str. PEST]
gi|55239546|gb|EAA10561.2| AGAP004610-PA [Anopheles gambiae str. PEST]
Length = 504
Score = 580 bits (1495), Expect = e-163, Method: Compositional matrix adjust.
Identities = 287/508 (56%), Positives = 382/508 (75%), Gaps = 20/508 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A+ +S ATII+E+VL+ L EI ALL+ADV +LV++++ N++ ++
Sbjct: 1 MVLADLGRKITNALHSLSKATIINEEVLDSMLKEICTALLEADVNIRLVKKLRENVRSVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ D++A G NKRR+IQ A+F EL K++DPG + P KG+P+VIMFVGLQGSGKTTTCTK
Sbjct: 61 DFDEMAGGLNKRRMIQSAVFKELVKLVDPGVKPYQPIKGRPNVIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++QKK WK LVCADTFRAGA+DQ+KQNATKA+IPFYGSYTE DPV IA +GVE FK
Sbjct: 121 LAYHYQKKNWKSCLVCADTFRAGAYDQIKQNATKARIPFYGSYTEVDPVTIAQDGVEMFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KE + IIVDTSGRHKQE +LFEEM V+ A VNPD +IFVMD++IGQA QA+AFK+
Sbjct: 181 KEGFEFIIVDTSGRHKQEESLFEEMLAVANA-VNPDNIIFVMDATIGQACEAQAKAFKEK 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V +G+VI+TK+DGHAKGGGALSAVAAT SP+IFIGTGEH+D+ E F KPF+S+LLGMGD
Sbjct: 240 VDIGSVIITKLDGHAKGGGALSAVAATNSPIIFIGTGEHIDDLEPFKTKPFISKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G +DK++E + +D EL+ K+ G FT+R MYEQFQNI+KMGP Q+ M+PGFS +
Sbjct: 300 IEGLIDKVNE-LKLDDNEELIDKIKHGQFTIRDMYEQFQNIMKMGPFSQIMGMIPGFSQD 358
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQVREVM 417
M KG E+ES A+IKR MTMMDSM++ ELD+ + KL + +R+ R+A+GSG REV
Sbjct: 359 FMTKGGEQESMARIKRLMTMMDSMSDGELDNKDGAKLFSKQPTRVTRVAQGSGVMEREVR 418
Query: 418 EMLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNA-------QHMSKVLPQGMLKQIG 469
+++ +Y + A + KM G+K + K G+M ++N+N Q M+K++ M +Q+G
Sbjct: 419 DLISQYTKFAAVIKKMGGIKGLFKSGDM---TKNVNPTQMAKLNQQMAKMIDPRMFQQMG 475
Query: 470 GVGGLQNLMKQM----GSTKDMMGMFGG 493
G+ GLQN+M+Q+ G ++M FGG
Sbjct: 476 GMNGLQNMMRQLQQGAGGLGNLMSGFGG 503
>gi|226430|prf||1512311A SRP protein 54kD
Length = 504
Score = 580 bits (1495), Expect = e-163, Method: Compositional matrix adjust.
Identities = 289/502 (57%), Positives = 385/502 (76%), Gaps = 12/502 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNATII+E+VLN L E+ ALL+A+ KLV++++ N+K +
Sbjct: 1 MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCTALLEAEFNIKLVKQLRENVKSAI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+L+++A+G NKR++IQ A+F EL K++DPG ++TP KGK +VIMFVGLQGSGKTTTC+K
Sbjct: 61 DLEEMASGLNKRKMIQHAVFKELVKLVDPGVKAWTPTKGKQNVIMFVGLQGSGKTTTCSK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY+Q+KGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGVE FK
Sbjct: 121 LAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
EN ++IIVDTSGRHKQE +LFEE QVS A + PD +++VMDS IGQA QA+AFK
Sbjct: 181 NENFEIIIVDTSGRHKQEDSLFEERLQVSNA-IQPDNIVYVMDSDIGQACEAQAKAFKDK 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V V +VIVTK+DGHAKGGGALSAVAATKSP+IFIGTGEH+D+FE F +PF+S+LLGMGD
Sbjct: 240 VDVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G +DK++E + +D L++KL G FTLR MYEQFQNI+KMGP Q+ M+PGF ++
Sbjct: 300 IEGLIDKVNE-LKLDDNEALIEKLKHGQFTLRDMYEQFQNIMKMGPFSQILGMIPGFGTD 358
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQVREVM 417
M KG E+ES A++K+ MT+MDSM ++ELDS++ K+ + RI R+ARGSG R+V
Sbjct: 359 FMSKGNEQESMARLKKLMTIMDSMWDQELDSTDGAKVFSKQPGRIQRVARGSGVSTRDVQ 418
Query: 418 EMLEEYKRLAKIWSKMKGLK-IPKKGEMSA-LSRNMNA---QHMSKVLPQGMLKQIGGVG 472
E+L +Y + A++ KM G+K + K G+MS +S++ A Q M+K++ +L +GG+
Sbjct: 419 ELLTQYTKFAQMVKKMGGIKGLFKGGDMSKNVSQSQMAKLNQQMAKMMDPRVLHHMGGMA 478
Query: 473 GLQNLMKQM--GSTKDMMGMFG 492
GLQ++M+Q G+ +M GM G
Sbjct: 479 GLQSMMRQFQQGAAGNMKGMMG 500
>gi|442752199|gb|JAA68259.1| Putative signal recognition particle subunit srp54 [Ixodes ricinus]
Length = 503
Score = 579 bits (1493), Expect = e-163, Method: Compositional matrix adjust.
Identities = 290/492 (58%), Positives = 375/492 (76%), Gaps = 16/492 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNATII+++VL+ L EI ALL+AD+ KLV++++ N++ +
Sbjct: 1 MVLADLGRKITNALRSLSNATIINKEVLDSMLKEICTALLEADINIKLVKQLRENVRSAI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++D++ AG NKRR+IQ A+F EL K++DPG ++ P KGK ++IMFVGLQGSGKTTTCTK
Sbjct: 61 DIDEMGAGLNKRRMIQSAVFKELIKLVDPGVKAWQPTKGKNNIIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++ KKGWK LVCADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGV+ FK
Sbjct: 121 LAYHYLKKGWKTCLVCADTFRAGAFDQLKQNATKARIPFYGSYTEVDPVVIAQEGVDKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
E ++I+VDTSGRHKQE +LFEEM QVS AT NPD +IFVMD+SIGQA QA+AFK+
Sbjct: 181 SEGFEIIVVDTSGRHKQEDSLFEEMLQVSNAT-NPDNIIFVMDASIGQACESQARAFKEK 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V VGAVIVTK+DGHAKGGGALSAVAAT SP+IFIGTGEH+D+FE F VKPF+S+LLGMGD
Sbjct: 240 VDVGAVIVTKLDGHAKGGGALSAVAATHSPIIFIGTGEHIDDFEPFKVKPFISKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G +DK++E + +D EL++KL G FTLR MYEQFQNI+KMGP Q+ M+PGFSS+
Sbjct: 300 IEGLIDKVNE-LKLDDNEELIEKLKHGEFTLRDMYEQFQNIMKMGPFSQIMGMIPGFSSD 358
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDS-SNPKLMN--DSRIMRIARGSGRQVREVM 417
M KG E+ES ++K+ MT+MDSM ++ELD KL + R R ARG+G REV
Sbjct: 359 FMTKGNEQESMGRLKKLMTIMDSMNDQELDHREGAKLFSRQTGRGTRGARGAGVTTREVQ 418
Query: 418 EMLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNA-------QHMSKVLPQGMLKQIG 469
E+L +Y + A + KM G+K + K G+M ++N+N Q M+K++ +L Q+G
Sbjct: 419 ELLAQYTKFAAMVKKMGGIKGLFKGGDM---AKNVNPAQMNKLNQQMAKMMDPRVLHQMG 475
Query: 470 GVGGLQNLMKQM 481
G GLQN+M+Q+
Sbjct: 476 GFSGLQNMMRQL 487
>gi|340722086|ref|XP_003399441.1| PREDICTED: signal recognition particle 54 kDa protein-like [Bombus
terrestris]
Length = 506
Score = 579 bits (1492), Expect = e-162, Method: Compositional matrix adjust.
Identities = 286/509 (56%), Positives = 387/509 (76%), Gaps = 21/509 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNAT+I+E+VLN L EI ALL+ADV +LV++++ N++ ++
Sbjct: 1 MVLADLGRKITSALRSLSNATVINEEVLNSMLKEICAALLEADVNIRLVKKLRENVRLVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ DD+A G NKRR+IQ A+F EL K++DP ++ P KG+P++IMFVGLQGSGKTTTCTK
Sbjct: 61 DFDDMAGGLNKRRMIQSAVFKELVKLIDPRVKAYQPIKGRPNIIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++ KK WK LVCADTFRAGA+DQ+KQNATKA+IPFYGSYTE DPV IA +GVE FK
Sbjct: 121 LAYHYLKKNWKACLVCADTFRAGAYDQIKQNATKARIPFYGSYTEVDPVTIAQDGVEMFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KE ++IIVDTSGRHKQE +LFEEM QV+ A + PD +IFVMD++IGQA QA+AFK+
Sbjct: 181 KEGYEIIIVDTSGRHKQEESLFEEMLQVANA-IQPDNIIFVMDATIGQACEAQAKAFKER 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V+VG++I+TK+DGHAKGGGALSAVAAT+SPVIF+GTGEH+D+ E F KPF+S+LLGMGD
Sbjct: 240 VNVGSIIITKLDGHAKGGGALSAVAATQSPVIFVGTGEHIDDLEPFKTKPFISKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G +DK++E + +D ELL+K+ G FTLR MYEQFQN++KMGP Q+ M+PGFS +
Sbjct: 300 IEGLIDKVNE-LNLDDNEELLEKIKHGQFTLRDMYEQFQNVMKMGPFSQLMGMIPGFSQD 358
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQVREVM 417
M KG E+ES A++KR MT+MDSM + ELD+ + KL + RI+R+A+GSG +EV
Sbjct: 359 FMSKGTEQESMARLKRIMTIMDSMNDSELDNRDGAKLFSKQPGRIIRVAQGSGVTEKEVK 418
Query: 418 EMLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNA-------QHMSKVLPQGMLKQIG 469
+++ +Y + A + KM G+K + K G+M S+N+N+ M+K++ +L Q+G
Sbjct: 419 DVITQYTKFAAVVKKMGGIKGLFKAGDM---SKNVNSIQMAKLNHQMAKMMDPRVLHQMG 475
Query: 470 GVGGLQNLMKQM-----GSTKDMMGMFGG 493
G+ GLQN+MKQ+ G ++MG FGG
Sbjct: 476 GMPGLQNIMKQLQQGAAGGLGNLMGGFGG 504
>gi|350423805|ref|XP_003493597.1| PREDICTED: signal recognition particle 54 kDa protein-like [Bombus
impatiens]
Length = 506
Score = 579 bits (1492), Expect = e-162, Method: Compositional matrix adjust.
Identities = 286/509 (56%), Positives = 387/509 (76%), Gaps = 21/509 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNAT+I+E+VLN L EI ALL+ADV +LV++++ N++ ++
Sbjct: 1 MVLADLGRKITSALRSLSNATVINEEVLNSMLKEICAALLEADVNIRLVKKLRENVRLVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ DD+A G NKRR+IQ A+F EL K++DP ++ P KG+P++IMFVGLQGSGKTTTCTK
Sbjct: 61 DFDDMAGGLNKRRMIQSAVFKELVKLIDPRVKAYQPIKGRPNIIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++ KK WK LVCADTFRAGA+DQ+KQNATKA+IPFYGSYTE DPV IA +GVE FK
Sbjct: 121 LAYHYLKKNWKACLVCADTFRAGAYDQIKQNATKARIPFYGSYTEVDPVTIAQDGVEMFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KE ++IIVDTSGRHKQE +LFEEM QV+ A + PD +IFVMD++IGQA QA+AFK+
Sbjct: 181 KEGYEIIIVDTSGRHKQEESLFEEMLQVANA-IQPDNIIFVMDATIGQACEAQAKAFKER 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V+VG++I+TK+DGHAKGGGALSAVAAT+SPVIF+GTGEH+D+ E F KPF+S+LLGMGD
Sbjct: 240 VNVGSIIITKLDGHAKGGGALSAVAATQSPVIFVGTGEHIDDLEPFKTKPFISKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G +DK++E + +D ELL+K+ G FTLR MYEQFQN++KMGP Q+ M+PGFS +
Sbjct: 300 IEGLIDKVNE-LNLDDNEELLEKIKHGQFTLRDMYEQFQNVMKMGPFSQLMGMIPGFSQD 358
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQVREVM 417
M KG E+ES A++KR MT+MDSM + ELD+ + KL + RI+R+A+GSG +EV
Sbjct: 359 FMSKGTEQESMARLKRIMTIMDSMNDSELDNRDGAKLFSKQPGRIVRVAQGSGVTEKEVK 418
Query: 418 EMLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNA-------QHMSKVLPQGMLKQIG 469
+++ +Y + A + KM G+K + K G+M S+N+N+ M+K++ +L Q+G
Sbjct: 419 DVITQYTKFAAVVKKMGGIKGLFKAGDM---SKNVNSIQMAKLNHQMAKMMDPRVLHQMG 475
Query: 470 GVGGLQNLMKQM-----GSTKDMMGMFGG 493
G+ GLQN+MKQ+ G ++MG FGG
Sbjct: 476 GMPGLQNIMKQLQQGAAGGLGNLMGGFGG 504
>gi|170579858|ref|XP_001895013.1| signal recognition particle 54 kDa protein (SRP54) [Brugia malayi]
gi|158598201|gb|EDP36148.1| signal recognition particle 54 kDa protein (SRP54), putative
[Brugia malayi]
Length = 501
Score = 578 bits (1491), Expect = e-162, Method: Compositional matrix adjust.
Identities = 290/503 (57%), Positives = 377/503 (74%), Gaps = 21/503 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I AI ++ ATII+E LN L E+ ALL+ADV +LV++++ N+KK +
Sbjct: 1 MVLADLGRKIRNAISKLGQATIINEDELNAMLKEVCAALLEADVNVRLVKQLKDNVKKTL 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ D++A G NKRR+IQ+ +F EL K++DPG F P KGKP++ MFVGLQGSGKTTTCTK
Sbjct: 61 DFDEMAGGVNKRRLIQRCVFTELMKLVDPGVKPFQPTKGKPNIFMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY+QKKGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA GV+ FK
Sbjct: 121 LAYYYQKKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVTIAANGVDKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
+ ++IIVDTSGRHKQEA+LFEEM QVS A VNP ++FVMD+SIGQA QA+AF ++
Sbjct: 181 DDGFEIIIVDTSGRHKQEASLFEEMLQVSNA-VNPSNIVFVMDASIGQACEAQARAFSET 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V VG+VI+TK+D HAKGGGALSAVAAT SPVIFIGTGEH+D+FE F+VKPFV +LLGMGD
Sbjct: 240 VDVGSVIITKLDSHAKGGGALSAVAATHSPVIFIGTGEHIDDFEPFEVKPFVQKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G + K++E+ D + EL+++L G FTLR MYEQFQNI+KMGP Q+ SM+PGF +
Sbjct: 300 IEGLVKKVNEIGIEDNE-ELIKRLKHGMFTLRDMYEQFQNIMKMGPFNQIMSMIPGFGPD 358
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND------SRIMRIARGSGRQVR 414
M KG E+ESQ+++K+ MT+MDSM++ ELD +PK ND R+ R+ARGSG
Sbjct: 359 FMSKGNEQESQSRLKKLMTIMDSMSDAELD--HPK-ANDLFSKEPGRVQRVARGSGTATS 415
Query: 415 EVMEMLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNA-------QHMSKVLPQGMLK 466
EV E+L +YK+ A + KM +K + K G+M+ ++N+N Q M+K++ +L+
Sbjct: 416 EVKELLTQYKKFADMVKKMGSMKGLFKNGDMN--TKNINPSQLQKLNQQMAKMMDPRVLQ 473
Query: 467 QIGGVGGLQNLMKQMGSTKDMMG 489
Q+GG+GGLQN+MKQ+ +G
Sbjct: 474 QMGGMGGLQNMMKQLQGASSSLG 496
>gi|196016017|ref|XP_002117863.1| signal recognition particle 54 [Trichoplax adhaerens]
gi|190579532|gb|EDV19625.1| signal recognition particle 54 [Trichoplax adhaerens]
Length = 505
Score = 578 bits (1489), Expect = e-162, Method: Compositional matrix adjust.
Identities = 280/495 (56%), Positives = 384/495 (77%), Gaps = 16/495 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LG I+ A++ +SNATII+E+V+ L EI ALL++DV +LV+ ++ N++ +
Sbjct: 1 MVLAELGRKITDALRSLSNATIINEEVVQALLKEICAALLESDVNVQLVKRLRENVRAAI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ +++AAG NKRRI+Q+A+FNELCK++DPG ++ P KGK +VIMFVGLQGSGKTTTCTK
Sbjct: 61 DFEEMAAGLNKRRILQRAVFNELCKLVDPGVKAWQPTKGKNNVIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A+Y+Q+KGWK L+CADTFRAGAFDQLKQN+TKA+IPFYGSYTE DPV IA +GVE FK
Sbjct: 121 MAHYYQRKGWKTCLICADTFRAGAFDQLKQNSTKARIPFYGSYTEMDPVVIAHDGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KEN ++IIVDTSGRHKQE +LFEEM Q+S T+ PD +IFVMD++IGQA QA+AFK+
Sbjct: 181 KENFEIIIVDTSGRHKQEDSLFEEMLQLSN-TITPDNIIFVMDATIGQACEAQARAFKEK 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V V +VI+TK+DGHAKGGG+LSAVAAT+SP+IFIGTGEH+++FE F +PF+S+LLGMGD
Sbjct: 240 VDVASVIITKLDGHAKGGGSLSAVAATRSPIIFIGTGEHIEDFEQFKTRPFISKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G +DK+ E + +D+ EL++KL G FTLR MYEQFQNI+KMGP Q+ M+PGF E
Sbjct: 300 IEGLIDKVTE-LKLDENEELIEKLKHGQFTLRDMYEQFQNIMKMGPFNQIIGMIPGFGPE 358
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMNDS--RIMRIARGSGRQVREVM 417
M KG E++S ++KR MT+MDSM +EELD+ + K + + R R+ARG+G +REV
Sbjct: 359 FMSKGNEQDSMKRLKRLMTIMDSMNDEELDNRDGAKFFSRTPGRTQRVARGAGVSIREVH 418
Query: 418 EMLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNA-------QHMSKVLPQGMLKQIG 469
E+L ++ + A++ KM G+K + K G+M ++N+N Q MS+++ +L+Q+G
Sbjct: 419 ELLSQHTKFAQVVKKMGGIKGLFKGGDM---NKNVNPSQMAKLNQQMSRMIDPRVLQQMG 475
Query: 470 GVGGLQNLMKQMGST 484
G+ G+QN+M+Q S+
Sbjct: 476 GMPGIQNMMRQFQSS 490
>gi|312381041|gb|EFR26883.1| hypothetical protein AND_06742 [Anopheles darlingi]
Length = 560
Score = 577 bits (1488), Expect = e-162, Method: Compositional matrix adjust.
Identities = 282/492 (57%), Positives = 376/492 (76%), Gaps = 16/492 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A+ +S ATII+E+VL+ L EI ALL+ADV +LV++++ N++ ++
Sbjct: 1 MVLADLGRKITNALHSLSKATIINEEVLDSMLKEICTALLEADVNIRLVKKLRENVRSVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ D++A G NKRR+IQ A+F EL K++DPG + P KG+P+VIMFVGLQGSGKTTTCTK
Sbjct: 61 DFDEMAGGLNKRRMIQSAVFKELVKLVDPGVKPYQPIKGRPNVIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++QKK WK LVCADTFRAGA+DQ+KQNATKA+IPFYGSYTE DPV IA +GVE FK
Sbjct: 121 LAYHYQKKNWKSCLVCADTFRAGAYDQIKQNATKARIPFYGSYTEVDPVVIAQDGVEMFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KE + IIVDTSGRHKQE +LFEEM V+ A V+PD +IFVMD++IGQA QA+AFK+
Sbjct: 181 KEGFEFIIVDTSGRHKQEESLFEEMLAVANA-VDPDNIIFVMDATIGQACEAQAKAFKEK 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V +G+VI+TK+DGHAKGGGALSAVAAT SP+IFIGTGEH+D+ E F KPF+S+LLGMGD
Sbjct: 240 VDIGSVIITKLDGHAKGGGALSAVAATNSPIIFIGTGEHIDDLEPFKTKPFISKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G +DK++E + +D EL+ K+ G FT+R MYEQFQNI+KMGP Q+ M+PGFS +
Sbjct: 300 IEGLIDKVNE-LKLDDNEELIDKIKHGQFTIRDMYEQFQNIMKMGPFSQIMGMIPGFSQD 358
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQVREVM 417
M KG E+ES A+IKR MTMMDSM++ ELD+ + KL + +R+ R+A+GSG REV
Sbjct: 359 FMTKGGEQESMARIKRLMTMMDSMSDGELDNKDGAKLFSKQPTRVTRVAQGSGVMEREVR 418
Query: 418 EMLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNA-------QHMSKVLPQGMLKQIG 469
+++ +Y + A + KM G+K + K G+M ++N+NA Q M+K++ M +Q+G
Sbjct: 419 DLISQYTKFAAVIKKMGGIKGLFKSGDM---TKNVNATQMAKLNQQMAKMIDPRMFQQMG 475
Query: 470 GVGGLQNLMKQM 481
G+ GLQN+M+Q+
Sbjct: 476 GMSGLQNMMRQL 487
>gi|47214799|emb|CAF89626.1| unnamed protein product [Tetraodon nigroviridis]
Length = 514
Score = 577 bits (1487), Expect = e-162, Method: Compositional matrix adjust.
Identities = 292/514 (56%), Positives = 385/514 (74%), Gaps = 30/514 (5%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNATII+E+VLN L E+ ALL+ADV KLV++++ N+K +
Sbjct: 1 MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCAALLEADVNIKLVKQLRENVKAAI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+L+++A+G NKRR+IQ A+F EL K++DPG ++TP KGK +VIMFVGLQGSGKTTTC+K
Sbjct: 61 DLEEMASGLNKRRMIQHAVFKELVKLVDPGVKAWTPTKGKNNVIMFVGLQGSGKTTTCSK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY+Q+KGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGV+ FK
Sbjct: 121 LAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVVIATEGVDKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
EN ++IIVDTSGRHKQE +LFEEM QVS A V PD +++VMD+SIGQA QA+AFK
Sbjct: 181 AENFEIIIVDTSGRHKQEDSLFEEMLQVSNA-VQPDNIVYVMDASIGQACESQAKAFKDK 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V V +VIVTK+DGHAKGGGALSAVAAT+SP+IFIGTGEH+D+FE F +PF+S+LLGMGD
Sbjct: 240 VDVASVIVTKLDGHAKGGGALSAVAATRSPIIFIGTGEHIDDFEPFKTQPFISKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G +D++++ + +D +L+ KL G FTLR MYEQFQNI+KMGP GQ+ M+PGF ++
Sbjct: 300 IEGLIDRVND-LKLDDNEDLINKLKHGQFTLRDMYEQFQNIMKMGPFGQIMGMIPGFGTD 358
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQVREVM 417
M KG E+ES A++K+ MT+MDSM ++ELD + KL + +RI R+ARGSG R+V
Sbjct: 359 FMSKGNEQESMARLKKLMTIMDSMNDQELDCKDGAKLFSKQPNRIQRVARGSGVATRDVQ 418
Query: 418 EMLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI-------- 468
E+L +Y + A++ KM G+K + K G+M S+N+N M+K L Q M K +
Sbjct: 419 ELLTQYTKFAQMVKKMGGIKGLFKGGDM---SKNVNPSQMAK-LNQQMAKMMDPRVLHHM 474
Query: 469 ----------GGVGGLQNLMKQM--GSTKDMMGM 490
GG+ GLQ++M+Q G+ +M GM
Sbjct: 475 GECGPAQQHPGGMTGLQSMMRQFQQGAAGNMKGM 508
>gi|443709552|gb|ELU04185.1| hypothetical protein CAPTEDRAFT_160274 [Capitella teleta]
Length = 505
Score = 576 bits (1485), Expect = e-162, Method: Compositional matrix adjust.
Identities = 286/506 (56%), Positives = 380/506 (75%), Gaps = 13/506 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +S+AT+I+E+VLN L EI ALL+ADV KLV++++ N+K ++
Sbjct: 1 MVLADLGRKITTALRSLSSATVINEEVLNSLLKEICTALLEADVNIKLVKKLRENVKSVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ D++AAG NKRR+IQ A+F EL K++DPG ++ P KGK ++IMFVGLQGSGKTTTCTK
Sbjct: 61 DFDEMAAGLNKRRMIQSAVFKELVKLIDPGVKAWQPTKGKNNIIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY+QKKGWK L+CADT+RAGAFDQLKQNA KA+IP+YGS E+DPV IA +GVE FK
Sbjct: 121 LAYYYQKKGWKTCLICADTYRAGAFDQLKQNAIKARIPYYGSLHETDPVVIAQDGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KE +IIVDTSGRHKQE +LFEEM QV+ V+PD +++VMD+SIGQA QA AFK+
Sbjct: 181 KEGFQIIIVDTSGRHKQEDSLFEEMLQVAN-VVSPDNIVYVMDASIGQACEAQAMAFKEK 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V V +VI+TK+D HAKGGGALSAVAATKSP+IFIGTGEH+D+FE F V+PFVS+LLGMGD
Sbjct: 240 VDVASVIITKLDSHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKVQPFVSKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G +DK++E + ++ EL++KL G FTLR MYEQFQNI+KMGP Q+ SM+PG ++
Sbjct: 300 IEGLIDKVNE-LKLEDNEELMKKLRHGQFTLRDMYEQFQNIMKMGPFSQIMSMIPGLGND 358
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDS-SNPKLMND-SRIMRIARGSGRQVREVME 418
M KG E+ES A++K+ MT+MDSM + ELDS KL R+ R+ARG+G EV E
Sbjct: 359 FMTKGNEQESMARLKKLMTIMDSMNDSELDSHEGAKLFRQKGRVQRVARGAGVSCNEVEE 418
Query: 419 MLEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKV-------LPQGMLKQIGGV 471
+L++Y + A++ KM G+K KG +++N+N M+K+ + +L+Q+GG+
Sbjct: 419 LLKQYTKFAQMVKKMGGIKGLFKGSGGDMAKNVNPTQMAKLNQNIARMMDPRVLQQMGGM 478
Query: 472 GGLQNLMKQM--GSTKDMMGMFGGGE 495
GLQN+M+Q G+ M MFG GE
Sbjct: 479 SGLQNMMRQFQAGAGGKMGNMFGMGE 504
>gi|384250211|gb|EIE23691.1| 54-kd signal recognition particle specific protein [Coccomyxa
subellipsoidea C-169]
Length = 485
Score = 576 bits (1484), Expect = e-162, Method: Compositional matrix adjust.
Identities = 303/497 (60%), Positives = 368/497 (74%), Gaps = 32/497 (6%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL +LG IS+A+ + NA IDEKVL+ CL EI ALLQADV +LV +++ N+K
Sbjct: 1 MVLNELGQKISQALSMIQNAESIDEKVLDACLKEIVTALLQADVNVRLVGKLRDNVKTRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPG---KPSFTPKKGKPSVIMFVGLQGSGKTTT 117
N D AG NKR+II++A+ +EL ML G K KKG+P+VIMFVGLQG+GKTTT
Sbjct: 61 NNADKGAGLNKRKIIEKAVVDELSSMLSSGVDEKKLVDLKKGQPNVIMFVGLQGAGKTTT 120
Query: 118 CTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVE 177
CTKY Y++KKG+KPALVCADTFRAGAFDQLKQNATK +IPFYGSYTE+DP IA +GVE
Sbjct: 121 CTKYGAYYKKKGFKPALVCADTFRAGAFDQLKQNATKMQIPFYGSYTETDPAVIAAKGVE 180
Query: 178 TFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAF 237
FKK N DLIIVDTSGRHKQE +LFEEMRQVS T PDL+IFVMD SIGQAA DQA+AF
Sbjct: 181 EFKKANHDLIIVDTSGRHKQEDSLFEEMRQVSVMT-KPDLIIFVMDGSIGQAAEDQAKAF 239
Query: 238 KQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLG 297
K +V VGAVI+TKMDGHAKGGGALSAVAATKSP++FIGTGEHMDEFE F+ FV RLLG
Sbjct: 240 KDTVEVGAVILTKMDGHAKGGGALSAVAATKSPIVFIGTGEHMDEFERFEPNAFVGRLLG 299
Query: 298 MGDWSGFMDKIHEVVPMDQ-QPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPG 356
GDW GF+DKI E VP D + EL+ LS+GNFT+RI+YEQ NI KMGP+GQ
Sbjct: 300 RGDWRGFVDKISEAVPEDAMKEELMDSLSKGNFTMRILYEQLANIQKMGPVGQ------- 352
Query: 357 FSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVRE 415
G+EKES A+IK +MT+MDSMT++ELD NPK++ + SR+MR+ARG+G
Sbjct: 353 --------GKEKESAARIKMFMTIMDSMTDKELDCPNPKVLQEQSRVMRVARGAGCNPYC 404
Query: 416 VMEMLEEYKRLAKI----WSKMKGL--KIPK-----KGEMSALSRNMNAQHMSKVLPQGM 464
V+E+LEEYKR+ + K KG ++ K +G M+ + MN Q MS++LP +
Sbjct: 405 VLELLEEYKRIRALIMGPGGKGKGFMQQMSKQMGNSRGAMNPHNMQMNIQQMSRMLPPQV 464
Query: 465 LKQIGGVGGLQNLMKQM 481
LKQ+GG G LQ L+KQM
Sbjct: 465 LKQMGGAGALQGLLKQM 481
>gi|294950295|ref|XP_002786558.1| signal recognition particle 54 kDa protein 2 [Perkinsus marinus
ATCC 50983]
gi|239900850|gb|EER18354.1| signal recognition particle 54 kDa protein 2 [Perkinsus marinus
ATCC 50983]
Length = 533
Score = 575 bits (1483), Expect = e-161, Method: Compositional matrix adjust.
Identities = 288/479 (60%), Positives = 373/479 (77%), Gaps = 4/479 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG IS A++++ AT+IDE VL+ECL EI+ ALLQADV + V E++ NIK+ V
Sbjct: 1 MVLADLGKQISGALRKLGKATVIDEAVLDECLKEISTALLQADVNVRYVAELRKNIKRTV 60
Query: 61 NLDDLAA-GHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCT 119
+L++LAA G NK+R+IQ+A+ N+L +ML P K + PKKG+P+VIMFVGLQGSGKTT+CT
Sbjct: 61 DLEELAAPGSNKQRVIQKAVVNQLVEMLSPDKEPYKPKKGQPNVIMFVGLQGSGKTTSCT 120
Query: 120 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
KYA+Y+Q+KGW+ ALVCADTFRAGAFDQLKQNATK KIPFYGSY ESDPV+IA EGV+ F
Sbjct: 121 KYAHYYQRKGWRVALVCADTFRAGAFDQLKQNATKVKIPFYGSYVESDPVKIAKEGVDLF 180
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQ 239
K + D+IIVDTSGRH+QEAALF+EM QV++A VNPD ++FVMDS IGQA F+QA+AFK
Sbjct: 181 KMDKYDIIIVDTSGRHRQEAALFDEMTQVAKA-VNPDEIVFVMDSHIGQACFEQAKAFKD 239
Query: 240 SVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMG 299
+VSVG+V+VTK+DGHAKGGGALSAVAAT SP+IFIGTGEH DEFE FD + FV RLLG+G
Sbjct: 240 TVSVGSVVVTKLDGHAKGGGALSAVAATDSPIIFIGTGEHFDEFEPFDAQSFVQRLLGLG 299
Query: 300 DWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSS 359
D G M I E +P+D+Q +L+ ++ G F+LR + EQF +++MGP+ +V SM+PG S
Sbjct: 300 DIKGLMSTIGEAMPLDKQGDLMARMQSGQFSLRDLREQFGTVMRMGPLSKVMSMIPGMQS 359
Query: 360 ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEM 419
++P G E+E K+K Y+TMMDSMT++ELD + SRI+R+ARGSG V EV +
Sbjct: 360 SMLPPGAEQEGVKKMKAYLTMMDSMTDKELDGDQDFCGSHSRILRVARGSGHAVGEVETL 419
Query: 420 LEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNA--QHMSKVLPQGMLKQIGGVGGLQN 476
+EEY++ +K+ SKM +K+ M + RN N Q+M K++ MLKQ+GG GGL N
Sbjct: 420 VEEYRKYSKMVSKMGKMKLGDPRTMQQMMRNPNQMMQNMGKMIDPKMLKQMGGQGGLMN 478
>gi|110763770|ref|XP_624497.2| PREDICTED: signal recognition particle 54 kDa protein-like [Apis
mellifera]
Length = 498
Score = 575 bits (1483), Expect = e-161, Method: Compositional matrix adjust.
Identities = 281/492 (57%), Positives = 379/492 (77%), Gaps = 16/492 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNAT+I+E+VLN L EI ALL+ADV +LV++++ N++ ++
Sbjct: 1 MVLADLGRKITSALRSLSNATVINEEVLNSMLKEICAALLEADVNIRLVKKLRENVRLVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ DD+A G NKRR+IQ A+F EL K++DPG ++ P KG+P++IMFVGLQGSGKTTTCTK
Sbjct: 61 DFDDMAGGLNKRRMIQSAVFKELVKLIDPGVKAYQPIKGRPNIIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++ KK WK LVCADTFRAGA+DQ+KQNATKA+IPFYGSYTE DPV IA +GVE FK
Sbjct: 121 LAYHYLKKNWKACLVCADTFRAGAYDQIKQNATKARIPFYGSYTEVDPVTIAQDGVEMFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KE ++IIVDTSGRHKQE +LFEEM QV+ A + PD +IFVMD++IGQA QA+AFK+
Sbjct: 181 KEGYEIIIVDTSGRHKQEESLFEEMLQVANA-IQPDNIIFVMDATIGQACEAQAKAFKER 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V+VG++I+TK+DGHAKGGGALSAVAAT+SPVIF+GTGEH+D+ E F KPF+S+LLGMGD
Sbjct: 240 VNVGSIIITKLDGHAKGGGALSAVAATQSPVIFVGTGEHIDDLEPFKTKPFISKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G +DK++E + +D ELL+K+ G FTLR MYEQFQN++KMGP Q+ M+PGFS +
Sbjct: 300 IEGLIDKVNE-LNLDDNEELLEKIKHGQFTLRDMYEQFQNVMKMGPFSQLMGMIPGFSQD 358
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQVREVM 417
M KG E+ES A++KR MT+MDSM + ELD+ + KL + RI R+A+GSG +EV
Sbjct: 359 FMSKGTEQESMARLKRIMTIMDSMNDSELDNRDGAKLFSKQPGRITRVAQGSGVTEKEVK 418
Query: 418 EMLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNA-------QHMSKVLPQGMLKQIG 469
+++ +Y + A + KM G+K + K G+M S+N+N+ M+K++ +L Q+G
Sbjct: 419 DVITQYTKFAAVVKKMGGIKGLFKAGDM---SKNVNSIQMAKLNHQMAKMMDPRVLHQMG 475
Query: 470 GVGGLQNLMKQM 481
G+ GLQN+MKQ+
Sbjct: 476 GMPGLQNIMKQL 487
>gi|340371045|ref|XP_003384056.1| PREDICTED: signal recognition particle 54 kDa protein-like
[Amphimedon queenslandica]
Length = 501
Score = 575 bits (1483), Expect = e-161, Method: Compositional matrix adjust.
Identities = 283/491 (57%), Positives = 377/491 (76%), Gaps = 16/491 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNAT+I+E+V+ L EI ALL+ADV KLV ++ N++ +
Sbjct: 1 MVLADLGRKITTALRSLSNATVINEEVVQAMLKEICTALLEADVNVKLVGRLRQNVRDAI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ +++AAG NKR+IIQ ++FNELC+++DPG P++T KGK +VIMFVGLQGSGKTTTCTK
Sbjct: 61 DFEEMAAGLNKRKIIQSSVFNELCRLIDPGVPAWTATKGKQNVIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++Q KGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA+EGVE FK
Sbjct: 121 LAYHYQHKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVVIAMEGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
+N ++IIVDTSGRHKQE +LFEEM QVS+A +NPD +I+VMD++IGQA QA+AFK
Sbjct: 181 ADNFEIIIVDTSGRHKQEESLFEEMLQVSQA-INPDNIIYVMDATIGQACESQARAFKAK 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V V +VIVTK+DGHAKGGGALSAVAAT+SP+ FIGTGEH+D+ E F KPF+S+LLGMGD
Sbjct: 240 VDVASVIVTKLDGHAKGGGALSAVAATESPITFIGTGEHIDDLEPFKTKPFISKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G +DK+ E + +D+ EL++KL G FTLR MYEQFQNI+KMGP Q+ M+PGF ++
Sbjct: 300 IQGLVDKVSE-LGLDENEELVKKLQHGEFTLRDMYEQFQNIMKMGPFNQIMGMIPGFPAD 358
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQVREVM 417
M KG E+ES A++K+ MT+MDSM++ ELD N KL R R+ARGSG V++V
Sbjct: 359 FMSKGNERESMARLKKLMTIMDSMSDGELDHPNGAKLFQQQPGRYERVARGSGTSVKDVK 418
Query: 418 EMLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQ-------GMLKQIG 469
+++ +Y + +++ KM G+K + K G+ + RN+N M+K+ Q +L+Q+G
Sbjct: 419 DLMTQYSKFSQMVKKMGGIKGLFKSGD---IGRNVNPNQMAKINQQMARMIDPRVLQQMG 475
Query: 470 GVGGLQNLMKQ 480
G+GGLQ++MKQ
Sbjct: 476 GMGGLQHMMKQ 486
>gi|391347716|ref|XP_003748101.1| PREDICTED: uncharacterized protein LOC100903576 [Metaseiulus
occidentalis]
Length = 1627
Score = 575 bits (1481), Expect = e-161, Method: Compositional matrix adjust.
Identities = 280/491 (57%), Positives = 379/491 (77%), Gaps = 14/491 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +S AT+I+++VL+ L EI ALL++D+ +LV++++ N++ +
Sbjct: 1 MVLADLGRRITGALRNLSTATVINQEVLDSMLKEICAALLESDINVRLVKQLRDNVRAAI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+++++A G N+R+++Q A+F EL K++DPG ++TP+KG+ + IMFVGLQGSGKTTTCTK
Sbjct: 61 DIEEMAVGLNRRKVVQSAVFKELVKLVDPGVKAWTPQKGRSNTIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++ KKGWK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGV FK
Sbjct: 121 LAYHYMKKGWKTALVCADTFRAGAFDQLKQNATKARIPFYGSYTEVDPVVIAAEGVAKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
E+ ++IIVDTSGRHKQE +LFEEM +VS A V+PD VIFVMD+SIGQA QA+AFK+
Sbjct: 181 AEHFEIIIVDTSGRHKQEDSLFEEMLEVSNA-VSPDNVIFVMDASIGQACELQARAFKEK 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V V +VI+TK+DGHAKGGGALSAVAATKSPVIFIGTGEH+D+FE F VKPF+ +LLG+GD
Sbjct: 240 VDVASVIITKLDGHAKGGGALSAVAATKSPVIFIGTGEHIDDFEPFRVKPFIQKLLGLGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G +DK++E+ +D+ EL++KL G FTLR MYEQFQNI+KMGP Q+ M+PGFS++
Sbjct: 300 IEGLIDKVNELK-LDENHELIEKLKHGEFTLRDMYEQFQNIMKMGPFNQLMGMIPGFSAD 358
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLM---NDSRIMRIARGSGRQVREVM 417
M KG E+ES +++KR MT+MDSMT++ELD+ M +RI R+ARG+G EV
Sbjct: 359 FMTKGNEQESMSRLKRLMTIMDSMTDDELDNREGARMFAKQQTRITRVARGAGCTTFEVH 418
Query: 418 EMLEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKV-------LPQGMLKQIGG 470
E+L +Y + A + KM G+K KG + L++N+N HM+K+ + +L+Q+GG
Sbjct: 419 ELLNQYTKFAGMVKKMGGMKGLFKG--NDLAKNVNPAHMNKLSAEMAKMIDPRVLQQMGG 476
Query: 471 VGGLQNLMKQM 481
G+QN+M+QM
Sbjct: 477 FSGIQNMMRQM 487
>gi|159471143|ref|XP_001693716.1| subunit of the signal recognition particle [Chlamydomonas
reinhardtii]
gi|158283219|gb|EDP08970.1| subunit of the signal recognition particle [Chlamydomonas
reinhardtii]
Length = 503
Score = 573 bits (1478), Expect = e-161, Method: Compositional matrix adjust.
Identities = 296/505 (58%), Positives = 395/505 (78%), Gaps = 16/505 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL +LG IS+A+ ++ +++IDEKVL+ L EI ALLQ+DV K V ++ +KK V
Sbjct: 1 MVLQELGSRISKAVATLAASSVIDEKVLDALLKEICTALLQSDVNVKQVANLRNGVKKRV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLD----PGKPSFTPKKGKPSVIMFVGLQGSGKTT 116
N+ +LAAG NK+R+I++A+F+ELC MLD P K +KGK V+MFVGLQGSGKTT
Sbjct: 61 NIQELAAGLNKQRVIEKAVFDELCDMLDSGADPKKLELKKEKGKQQVVMFVGLQGSGKTT 120
Query: 117 TCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGV 176
TCTKYAYY++KKGWKPALVCADT+RAGAFDQLKQNATKA+IPFYGSY E+DP IA +GV
Sbjct: 121 TCTKYAYYYKKKGWKPALVCADTYRAGAFDQLKQNATKAQIPFYGSYKETDPAAIAQQGV 180
Query: 177 ETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQA 236
F++E DLIIVDTSGRHKQEAALFEEM+QV+ A V+PD++IFVMD SIGQAAFDQA+A
Sbjct: 181 LRFREEGRDLIIVDTSGRHKQEAALFEEMKQVA-AAVSPDVIIFVMDGSIGQAAFDQAKA 239
Query: 237 FKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLL 296
FK++V VGAVI+TK+DGHAKGGGALSAV+ATKSP+IF+GTGEHMD+FE F+ K FV RLL
Sbjct: 240 FKEAVEVGAVIITKLDGHAKGGGALSAVSATKSPIIFLGTGEHMDQFESFETKRFVQRLL 299
Query: 297 GMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPG 356
G GD SG MDKI +V+P D+QPELL +S+GN +R++ + F+++L++GP+ Q+ SMLPG
Sbjct: 300 GKGDVSGLMDKIQDVIPEDKQPELLDTISKGNVNMRVLKDMFESVLELGPMSQMMSMLPG 359
Query: 357 FSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVRE 415
F+SELMPKG +K++Q I+RY+T+++SMT++E+D++N K++++ SR+ R+ARGSG +
Sbjct: 360 FNSELMPKGNDKQNQMMIRRYITIIESMTDKEMDTTNIKMLSETSRVNRLARGSGSTPAQ 419
Query: 416 VMEMLEEYKRLAKIWSK-MKGLKIPK-----KGEMSALSRNMNAQ--HMSKVLPQGMLKQ 467
V+ +LE YK +K ++ +K +PK KG++ R M A MS+ LP +++Q
Sbjct: 420 VLALLESYKHYSKYATQALKAANLPKNLKGMKGDVQMNPRQMQAALGKMSRALPPQLMQQ 479
Query: 468 IGGVGGLQNLMKQMGSTKDMMGMFG 492
+GG+ GLQ+LMK G MMG G
Sbjct: 480 LGGMSGLQSLMK--GLDGKMMGGMG 502
>gi|393907084|gb|EFO21698.2| signal recognition particle protein [Loa loa]
Length = 501
Score = 573 bits (1476), Expect = e-161, Method: Compositional matrix adjust.
Identities = 286/503 (56%), Positives = 377/503 (74%), Gaps = 21/503 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I AI ++ ATII+E LN L E+ ALL+ADV +LV+ ++ N+K+ +
Sbjct: 1 MVLADLGRKIRNAISKLGQATIINEDELNAMLKEVCAALLEADVNVRLVKVLKDNVKRTL 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ D++A G NKRR+IQ+ +F EL K++DPG F P KGKP++ MFVGLQGSGKTTTC+K
Sbjct: 61 DFDEMAGGVNKRRLIQRCVFTELMKLVDPGVKPFQPTKGKPNIFMFVGLQGSGKTTTCSK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY+QKKGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSY E DPV IA GV+ FK
Sbjct: 121 LAYYYQKKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYIEMDPVTIAASGVDKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
++ ++I+VDTSGRHKQEA+LFEEM QVS A VNP+ ++FVMD+SIGQA QA+AF ++
Sbjct: 181 EDGFEIIVVDTSGRHKQEASLFEEMLQVSNA-VNPNNIVFVMDASIGQACEAQARAFSET 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V VG+VI+TK+D HAKGGGALSAVAAT SPVIFIGTGEH+D+FE F+VKPFV +LLGMGD
Sbjct: 240 VDVGSVIITKLDSHAKGGGALSAVAATHSPVIFIGTGEHIDDFEPFEVKPFVQKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G + K++E+ D + EL+++L G FTLR MYEQFQNI+KMGP Q+ SM+PGF +
Sbjct: 300 IEGLVKKVNEIGIEDNE-ELIKRLKHGMFTLRDMYEQFQNIMKMGPFNQIMSMIPGFGPD 358
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND------SRIMRIARGSGRQVR 414
M KG E+ESQ+++K+ MT+MDSM++ ELD +PK ND R+ R+ARGSG
Sbjct: 359 FMSKGNEQESQSRLKKLMTIMDSMSDAELD--HPK-ANDLFSKEPGRVQRVARGSGTATS 415
Query: 415 EVMEMLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNA-------QHMSKVLPQGMLK 466
EV E+L +YK+ A + KM +K + K G+M+ ++N+N Q M+K++ +L+
Sbjct: 416 EVKELLTQYKKFADMVKKMGSMKGLFKNGDMN--TKNINPSQLQKLNQQMAKMMDPRVLQ 473
Query: 467 QIGGVGGLQNLMKQMGSTKDMMG 489
Q+GG+GGLQN+MKQ+ +G
Sbjct: 474 QMGGMGGLQNMMKQLQGASSSLG 496
>gi|332372642|gb|AEE61463.1| unknown [Dendroctonus ponderosae]
Length = 505
Score = 573 bits (1476), Expect = e-161, Method: Compositional matrix adjust.
Identities = 287/505 (56%), Positives = 379/505 (75%), Gaps = 15/505 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A+ +S ATII+E VLN L EI ALL+ADV K+V+ ++ N++ ++
Sbjct: 1 MVLADLGRKITSALHGLSKATIINEDVLNGMLKEICAALLEADVNVKMVKALRENVRAVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ D++A G NKRR+IQ A+F EL K++DP F P KGKP++IMFVGLQGSGKTTTCTK
Sbjct: 61 DFDEMAGGLNKRRMIQSAVFKELVKLVDPSVKPFQPVKGKPNIIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY+QKK WK LVCADTFRAGA+DQ+KQN TKA+IPFYGSYTE DPV IA +GVE FK
Sbjct: 121 MAYYYQKKNWKSCLVCADTFRAGAYDQVKQNCTKARIPFYGSYTEVDPVIIAQDGVEMFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KE+ ++IIVDTSGRHKQE +LFEEM QVS A V PD ++FVMD++IGQA +QA+AFK
Sbjct: 181 KEHFEIIIVDTSGRHKQEDSLFEEMLQVSNA-VKPDNIVFVMDATIGQACEEQARAFKAK 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V VG+VI+TK+DGHAKGGGALSAVAAT SP+IFIG GEH+D+ E F KPF+S+LLGMGD
Sbjct: 240 VDVGSVIITKLDGHAKGGGALSAVAATSSPIIFIGVGEHIDDLEPFKTKPFISKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G +DK++E + ++ ELL+K+ G FTLR MYEQFQNI+KMGP Q+ M+PGFS +
Sbjct: 300 IEGLIDKVNE-LKLEDNEELLEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFSQD 358
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMN--DSRIMRIARGSGRQVREVM 417
M KG E+ES A++K+ MT+MDSM + ELDS + K+ + RI+R+A+GSG REV
Sbjct: 359 FMSKGSEQESMARLKKLMTIMDSMNDGELDSRDGAKVFSKQQGRIVRVAQGSGVTEREVK 418
Query: 418 EMLEEYKRLAKIWSKMKGLK-IPKKGEMSA-LSRNMNA---QHMSKVLPQGMLKQIGGVG 472
E++ +Y + A + KM G+K + K G+M +++N A Q M++++ +L Q+GG+
Sbjct: 419 ELIAQYTKFAAVVKKMGGIKGLFKGGDMGKNVNQNQMAKLNQQMARMMDPRVLHQMGGMA 478
Query: 473 GLQNLMKQM-----GSTKDMMGMFG 492
GLQN+M+Q+ G ++MG FG
Sbjct: 479 GLQNMMRQLQSGAAGGLGNLMGGFG 503
>gi|294944803|ref|XP_002784438.1| signal recognition particle 54 kDa protein 2 [Perkinsus marinus
ATCC 50983]
gi|239897472|gb|EER16234.1| signal recognition particle 54 kDa protein 2 [Perkinsus marinus
ATCC 50983]
Length = 528
Score = 572 bits (1474), Expect = e-160, Method: Compositional matrix adjust.
Identities = 285/479 (59%), Positives = 374/479 (78%), Gaps = 4/479 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG IS A++++ AT+IDE VL+ECL EI+ ALLQADV + V E++ NIK+ V
Sbjct: 1 MVLADLGKQISGALRKLGKATVIDEAVLDECLKEISTALLQADVNVRYVAELRKNIKRTV 60
Query: 61 NLDDLAA-GHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCT 119
+L++LAA G NK+R+IQ+A+ N+L +ML P K + P KG+P+VIMFVGLQGSGKTT+CT
Sbjct: 61 DLEELAAPGSNKQRVIQKAVVNQLVEMLSPDKEPYKPTKGQPNVIMFVGLQGSGKTTSCT 120
Query: 120 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
KYA+Y+Q+KGW+ ALVCADTFRAGAFDQLKQNATK KIPFYGSY ESDPV+IA EGV+ F
Sbjct: 121 KYAHYYQRKGWRVALVCADTFRAGAFDQLKQNATKVKIPFYGSYVESDPVKIAKEGVDLF 180
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQ 239
KK+ D+IIVDTSGRH+QEAALF+EM QV+ A VNP+ ++FVMDS IGQA F+QA+AFK
Sbjct: 181 KKDKYDIIIVDTSGRHRQEAALFDEMTQVAHA-VNPNDIVFVMDSHIGQACFEQAKAFKD 239
Query: 240 SVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMG 299
+VSVG+V+VTK+DGHAKGGGALSAVAAT SP+IFIGTGEH DEFE FD + FV RLLG+G
Sbjct: 240 TVSVGSVVVTKLDGHAKGGGALSAVAATDSPIIFIGTGEHFDEFEPFDAQSFVQRLLGLG 299
Query: 300 DWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSS 359
D G M I E +P+++Q +++ ++ G F+LR + EQF +++MGP+ +V SM+PG S
Sbjct: 300 DIKGLMSTIGEAMPLEKQGDMMARMQSGQFSLRDLREQFGTVMRMGPLSKVMSMIPGMQS 359
Query: 360 ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEM 419
++P G E+E K+K Y+TMMDSMT++ELD ++SRI+R+A+GSG VREV +
Sbjct: 360 SMLPPGAEQEGVKKMKAYLTMMDSMTDKELDGEQDFCGSNSRIVRVAKGSGHAVREVEML 419
Query: 420 LEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNA--QHMSKVLPQGMLKQIGGVGGLQN 476
+EEY++ +K+ SKM +K+ M + RN N Q+M K++ MLKQ+GG GGL N
Sbjct: 420 VEEYRKYSKMVSKMGKMKLGDPRTMQQMMRNPNQMMQNMGKMIDPKMLKQMGGQGGLMN 478
>gi|30580515|sp|Q8MZJ6.1|SRP54_GEOCY RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|20750404|gb|AAM23234.1| signal recognition particle 54 kD protein [Geodia cydonium]
Length = 499
Score = 572 bits (1473), Expect = e-160, Method: Compositional matrix adjust.
Identities = 294/503 (58%), Positives = 370/503 (73%), Gaps = 15/503 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A+ T+I+E+VL L EI ALL+ADV KLV +++ N++ +
Sbjct: 1 MVLADLGRKITTALLP-RQRTVINEEVLQAMLKEICTALLEADVNVKLVGKLRQNVRAAI 59
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ +D+ AG +KRRIIQ ++FNELCK+LDPG P + P KG +VIMFVGLQGSGKTTTCTK
Sbjct: 60 DFEDMGAGLSKRRIIQTSVFNELCKLLDPGVPVWHPTKGHSNVIMFVGLQGSGKTTTCTK 119
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++QKKGWK LVCADTFRAGAFDQLKQNATKA++PFYGSYTE DPV IA EGVE FK
Sbjct: 120 LAYHYQKKGWKTCLVCADTFRAGAFDQLKQNATKARVPFYGSYTEMDPVVIAQEGVEKFK 179
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
+++ ++IIVDTSGRHKQE +LFEEM QVS+A ++PD +IFVMD +IGQA QA+AFK+
Sbjct: 180 EDSFEVIIVDTSGRHKQEESLFEEMLQVSQA-IDPDNIIFVMDGTIGQACESQARAFKEK 238
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V V +VIVTK+DGHAKGGGALSAVAAT+SP+IFIGTGEH+DE E F KPFVS+LLGMGD
Sbjct: 239 VDVASVIVTKLDGHAKGGGALSAVAATRSPIIFIGTGEHIDEMEPFKTKPFVSKLLGMGD 298
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G M+K+ + + +D+ EL+ KL G FTLR MYEQFQNI+KMGP Q+ M+PGFS +
Sbjct: 299 LEGLMEKVSD-LKLDENEELMDKLKHGQFTLRDMYEQFQNIMKMGPFNQIIGMIPGFSPD 357
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQVREVM 417
M KG E+ES AK+KR MTMMDSM + ELD N KL + R R+ARGSG VREV
Sbjct: 358 FMSKGNERESMAKLKRLMTMMDSMNDGELDHPNGAKLFSKQPGRAARVARGSGTSVREVN 417
Query: 418 EMLEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNA-------QHMSKVLPQGMLKQIGG 470
E+L++Y + KM G+K KG L +N+N Q M+K++ +L+Q+GG
Sbjct: 418 ELLKQYSNFSATVKKMGGIKGLFKG--GDLGKNVNPSQMAKLNQQMAKMMDPRVLQQMGG 475
Query: 471 VGGLQNLMKQMGSTKDMMGMFGG 493
+ GLQN+M+Q M F G
Sbjct: 476 MSGLQNMMRQFQQGASNMPGFKG 498
>gi|324502545|gb|ADY41120.1| Signal recognition particle 54 kDa protein [Ascaris suum]
Length = 503
Score = 571 bits (1472), Expect = e-160, Method: Compositional matrix adjust.
Identities = 286/503 (56%), Positives = 378/503 (75%), Gaps = 21/503 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I AI ++ ATII+E LN LNE+ ALL+ADV +LV++++ N+KK +
Sbjct: 1 MVLADLGRRIRNAIGKLGQATIINEDELNAMLNEVCGALLEADVNIRLVKQLRDNVKKTL 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ D++A G NKRR+IQ+ +F EL K++DPG + P KGKP+V MFVGLQGSGKTTTCTK
Sbjct: 61 DFDEMAGGVNKRRLIQRCVFTELMKLVDPGVKPYQPTKGKPNVFMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY+QKKGWK L+CADTFRAGAFDQLKQNATKA+IP+YGSY E DPV IA GV+ FK
Sbjct: 121 LAYYYQKKGWKTCLICADTFRAGAFDQLKQNATKARIPYYGSYIEMDPVVIATNGVDKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
E ++IIVDTSGRHKQEA+LFEEM QVS A ++P+ V+FVMD+SIGQA QA+AF +
Sbjct: 181 GEGFEIIIVDTSGRHKQEASLFEEMLQVSNA-ISPNNVVFVMDASIGQACEAQARAFSTT 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V VG+VI+TK+D HAKGGGALSAVAAT+SP+IFIGTGEH+D+FE F+VKPFV +LLGMGD
Sbjct: 240 VDVGSVIITKLDSHAKGGGALSAVAATRSPIIFIGTGEHIDDFEPFEVKPFVQKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G + K++E + ++ EL+++L G FTLR MYEQFQNI+KMGP Q+ SM+PGF +
Sbjct: 300 IEGLVKKVNE-MGLEDNEELIKRLKHGMFTLRDMYEQFQNIMKMGPFNQIMSMIPGFGQD 358
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND------SRIMRIARGSGRQVR 414
M KG E+ESQ+++K+ MT+MDSM++ ELD +PK ND R+ R+ARGSG V
Sbjct: 359 FMTKGNEQESQSRLKKLMTIMDSMSDLELD--HPK-ANDLFSKEPGRVQRVARGSGTSVS 415
Query: 415 EVMEMLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNA-------QHMSKVLPQGMLK 466
+V E+L +YK+ A + KM +K + K G+M+ ++N+N Q M+K++ +L+
Sbjct: 416 DVKELLTQYKKFADMVKKMGSMKGLFKNGDMN--TKNINPSQLQKLNQQMAKMMDPRVLQ 473
Query: 467 QIGGVGGLQNLMKQMGSTKDMMG 489
+GG+GGLQN+M+Q+ MG
Sbjct: 474 HMGGMGGLQNMMRQLQGASSAMG 496
>gi|312079906|ref|XP_003142374.1| signal recognition particle protein [Loa loa]
Length = 530
Score = 571 bits (1471), Expect = e-160, Method: Compositional matrix adjust.
Identities = 286/503 (56%), Positives = 377/503 (74%), Gaps = 21/503 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I AI ++ ATII+E LN L E+ ALL+ADV +LV+ ++ N+K+ +
Sbjct: 30 MVLADLGRKIRNAISKLGQATIINEDELNAMLKEVCAALLEADVNVRLVKVLKDNVKRTL 89
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ D++A G NKRR+IQ+ +F EL K++DPG F P KGKP++ MFVGLQGSGKTTTC+K
Sbjct: 90 DFDEMAGGVNKRRLIQRCVFTELMKLVDPGVKPFQPTKGKPNIFMFVGLQGSGKTTTCSK 149
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY+QKKGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSY E DPV IA GV+ FK
Sbjct: 150 LAYYYQKKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYIEMDPVTIAASGVDKFK 209
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
++ ++I+VDTSGRHKQEA+LFEEM QVS A VNP+ ++FVMD+SIGQA QA+AF ++
Sbjct: 210 EDGFEIIVVDTSGRHKQEASLFEEMLQVSNA-VNPNNIVFVMDASIGQACEAQARAFSET 268
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V VG+VI+TK+D HAKGGGALSAVAAT SPVIFIGTGEH+D+FE F+VKPFV +LLGMGD
Sbjct: 269 VDVGSVIITKLDSHAKGGGALSAVAATHSPVIFIGTGEHIDDFEPFEVKPFVQKLLGMGD 328
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G + K++E+ D + EL+++L G FTLR MYEQFQNI+KMGP Q+ SM+PGF +
Sbjct: 329 IEGLVKKVNEIGIEDNE-ELIKRLKHGMFTLRDMYEQFQNIMKMGPFNQIMSMIPGFGPD 387
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND------SRIMRIARGSGRQVR 414
M KG E+ESQ+++K+ MT+MDSM++ ELD +PK ND R+ R+ARGSG
Sbjct: 388 FMSKGNEQESQSRLKKLMTIMDSMSDAELD--HPK-ANDLFSKEPGRVQRVARGSGTATS 444
Query: 415 EVMEMLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNA-------QHMSKVLPQGMLK 466
EV E+L +YK+ A + KM +K + K G+M+ ++N+N Q M+K++ +L+
Sbjct: 445 EVKELLTQYKKFADMVKKMGSMKGLFKNGDMN--TKNINPSQLQKLNQQMAKMMDPRVLQ 502
Query: 467 QIGGVGGLQNLMKQMGSTKDMMG 489
Q+GG+GGLQN+MKQ+ +G
Sbjct: 503 QMGGMGGLQNMMKQLQGASSSLG 525
>gi|170046875|ref|XP_001850971.1| signal recognition particle 54 kda protein [Culex quinquefasciatus]
gi|167869479|gb|EDS32862.1| signal recognition particle 54 kda protein [Culex quinquefasciatus]
Length = 515
Score = 570 bits (1470), Expect = e-160, Method: Compositional matrix adjust.
Identities = 282/507 (55%), Positives = 381/507 (75%), Gaps = 20/507 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A+ +S ATII+ +VL+ L EI ALL+ADV +LV++++ N+K ++
Sbjct: 12 MVLADLGRKITNALHSLSKATIINAEVLDAMLKEICTALLEADVNIRLVKKLRENVKSVI 71
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ D++A G NKRR+IQ A+F EL K++DPG + P KG+P++IMFVGLQGSGKTTTCTK
Sbjct: 72 DFDEMAGGLNKRRMIQTAVFKELVKLVDPGVKPYQPVKGRPNIIMFVGLQGSGKTTTCTK 131
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++QKK WK LVCADTFRAGA+DQ+KQNATKA+IPFYGSYTE DPV IA +GVE FK
Sbjct: 132 LAYHYQKKNWKSCLVCADTFRAGAYDQIKQNATKARIPFYGSYTEVDPVVIAQDGVEMFK 191
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KE + IIVDTSGRHKQE +LFEEM V+ A + PD +IFVMD++IGQA QA+AFK+
Sbjct: 192 KEGFEFIIVDTSGRHKQEESLFEEMLAVATA-IKPDNIIFVMDATIGQACEAQAKAFKEK 250
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V +G+VI+TK+DGHAKGGGALSAVAAT SP+IFIGTGEH+D+ E F KPF+S+LLGMGD
Sbjct: 251 VDIGSVIITKLDGHAKGGGALSAVAATSSPIIFIGTGEHIDDLEPFKTKPFISKLLGMGD 310
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G ++K+++ + +D EL+ K+ G FT+R MYEQFQNI+KMGP Q+ M+PGFS +
Sbjct: 311 IEGLIEKVND-LNLDDNEELIDKIKHGQFTIRDMYEQFQNIMKMGPFSQIMGMIPGFSQD 369
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQVREVM 417
M KG E+ES A+IKR MTMMDSM++ ELD+ + KL + +R++R+A+GSG REV
Sbjct: 370 FMTKGGEQESMARIKRLMTMMDSMSDGELDNKDGAKLFSKQPTRVVRVAQGSGVTDREVR 429
Query: 418 EMLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNA-------QHMSKVLPQGMLKQIG 469
+++ +Y + A + KM G+K + K G+M ++N+N Q M+K++ M +Q+G
Sbjct: 430 DLITQYTKFAAVIKKMGGIKGLFKSGDM---TKNVNPTQMAKLNQQMAKMIDPRMFQQMG 486
Query: 470 GVGGLQNLMKQM----GSTKDMMGMFG 492
G+ GLQN+M+Q+ G ++MG FG
Sbjct: 487 GMSGLQNMMRQLQQGAGGLGNLMGGFG 513
>gi|357630058|gb|EHJ78449.1| putative signal recognition particle 54 kDa protein [Danaus
plexippus]
Length = 501
Score = 570 bits (1468), Expect = e-160, Method: Compositional matrix adjust.
Identities = 282/506 (55%), Positives = 375/506 (74%), Gaps = 16/506 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A+Q +S ATII+E+VLN L +I ALL+ADV +LV+ ++ N++ ++
Sbjct: 1 MVLADLGRKITTALQSLSRATIINEEVLNSMLKQICAALLEADVNIRLVKNLRENVRAVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ D++A G NKRR+IQ A+F EL K++DPG + P KGKP+VIMFVGLQGSGKTTTCTK
Sbjct: 61 DFDEMAGGLNKRRMIQSAVFKELVKLVDPGVKPYQPVKGKPNVIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++ +K WK LVCADTFRAGA+DQ+KQN TKA+IPFYGSYTE DPV IA GV+ FK
Sbjct: 121 LAYHYLRKNWKSCLVCADTFRAGAYDQVKQNCTKARIPFYGSYTEVDPVVIASTGVDMFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KE ++IIVDTSGRHKQE +LFEEM V+ A + PD +IFVMD++IGQA QA+AFK
Sbjct: 181 KEGFEMIIVDTSGRHKQEESLFEEMLAVATA-IKPDNIIFVMDATIGQACESQARAFKDK 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V +G+VI+TK+DGHAKGGGALSAVAAT+SP+IFIGTGEH+D+ E F KPF+++LLGMGD
Sbjct: 240 VDIGSVIITKLDGHAKGGGALSAVAATQSPIIFIGTGEHIDDLEPFKTKPFINKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G +DK+HE + +D ELL+KL G FTLR MYEQFQNI+KMGP Q+ M+PGFS +
Sbjct: 300 IEGLLDKVHE-LKLDDNDELLEKLKHGQFTLRAMYEQFQNIMKMGPFSQIMGMIPGFSQD 358
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQVREVM 417
LM KG E+ES AK+KR MT+MDSM ELD + KL + +RI R+A+G+G R+V
Sbjct: 359 LMSKGSEQESMAKLKRLMTIMDSMNEGELDHRDGAKLFSKQPTRITRVAQGAGVTERDVK 418
Query: 418 EMLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNA-------QHMSKVLPQGMLKQIG 469
+++ +Y + A + KM G+K + K G+M ++N+N Q M+K++ +L+Q+G
Sbjct: 419 DLIAQYTKFAAVVKKMGGIKGLFKGGDM---AKNVNQTQMAKLNQQMAKMMDPRILQQMG 475
Query: 470 GVGGLQNLMKQMGSTKDMMGMFGGGE 495
G+ GL N+M+Q+ M GG+
Sbjct: 476 GMSGLHNMMRQLQQGSSGMNSLMGGK 501
>gi|91079686|ref|XP_967889.1| PREDICTED: similar to AGAP004610-PA [Tribolium castaneum]
gi|270003347|gb|EEZ99794.1| hypothetical protein TcasGA2_TC002574 [Tribolium castaneum]
Length = 508
Score = 570 bits (1468), Expect = e-160, Method: Compositional matrix adjust.
Identities = 281/490 (57%), Positives = 375/490 (76%), Gaps = 16/490 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A+Q +S ATII+E+VLN L EI ALL+ADV +LV++++ N++ ++
Sbjct: 1 MVLADLGRKITTALQSLSKATIINEEVLNGMLKEICAALLEADVNIRLVKKLRENVRAVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ D++A G NKRR+IQ A+F EL K++DPG + P KGKP+VIMFVGLQGSGKTTTCTK
Sbjct: 61 DFDEMAGGLNKRRMIQSAVFKELVKLVDPGVKPYQPVKGKPNVIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++QKK WK LVCADTFRAGA+DQ+KQN TKA+IPFYGSYTE DPV IA +GV+ FK
Sbjct: 121 LAYHYQKKNWKSCLVCADTFRAGAYDQVKQNCTKARIPFYGSYTEVDPVVIAQDGVDMFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KE ++IIVDTSGRHKQE +LFEEM VS A + PD +IFVMD++IGQA QA+AFK+
Sbjct: 181 KEGFEIIIVDTSGRHKQEESLFEEMLAVSNA-IQPDNIIFVMDATIGQACEAQAKAFKEK 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V VG+VI+TK+DGHAKGGGALSAVAAT SP+I+IGTGEH+D+ E F KPFVS+LLGMGD
Sbjct: 240 VDVGSVIITKLDGHAKGGGALSAVAATNSPIIYIGTGEHIDDLEPFKTKPFVSKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G +DK++E + ++ ELL+K+ G FTLR MYEQFQNI+KMGP Q+ M+PGFS +
Sbjct: 300 IEGLIDKVNE-LKLEDNEELLEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFSQD 358
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMN--DSRIMRIARGSGRQVREVM 417
M KG E+ES +++KR MT+MDSM ++ELDS + K+ + + R++R+A+GSG REV
Sbjct: 359 FMSKGSEQESMSRLKRLMTIMDSMNDDELDSRDGAKIFSKQNGRVVRVAQGSGVTEREVK 418
Query: 418 EMLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNA-------QHMSKVLPQGMLKQIG 469
E++ +Y + A + KM G+K + K G+M ++N+N Q M+K++ +L Q+G
Sbjct: 419 ELITQYTKFAAVVKKMGGIKGLFKGGDM---AKNVNPAQMAKLNQQMAKMMDPRVLHQMG 475
Query: 470 GVGGLQNLMK 479
G+ GLQN+M+
Sbjct: 476 GMPGLQNMMR 485
>gi|242009196|ref|XP_002425377.1| Signal recognition particle 54 kDa protein, putative [Pediculus
humanus corporis]
gi|212509171|gb|EEB12639.1| Signal recognition particle 54 kDa protein, putative [Pediculus
humanus corporis]
Length = 501
Score = 569 bits (1467), Expect = e-159, Method: Compositional matrix adjust.
Identities = 284/509 (55%), Positives = 381/509 (74%), Gaps = 26/509 (5%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A+ +S AT VLN L +I ALL+ADV +LV++++ N++ ++
Sbjct: 1 MVLADLGRKITSALHSLSKAT-----VLNSMLKDICTALLEADVNIRLVKKLRENVRAVI 55
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ D++A G NKRR+IQ A+F EL K++DPG S P KGKP++IMFVGLQGSGKTTTCTK
Sbjct: 56 DFDEMAGGLNKRRMIQSAVFKELVKLVDPGVKSHQPVKGKPNIIMFVGLQGSGKTTTCTK 115
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++ KK WK LVCADTFRAGA+DQLKQNATKA+IPFYGSYTE DPV IA +GVE FK
Sbjct: 116 LAYHYLKKNWKACLVCADTFRAGAYDQLKQNATKARIPFYGSYTEVDPVVIAQDGVEMFK 175
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KE ++IIVDTSGRHKQE +LFEEM QVS A + PD +IFVMD++IGQA QA+AFK+
Sbjct: 176 KEGFEIIIVDTSGRHKQEESLFEEMLQVSNA-IKPDNIIFVMDATIGQACESQARAFKEK 234
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V+VG+VI+TK+DGHAKGGGALSAVAAT SP+IFIGTGEH+D+FE F KPF+S+LLGMGD
Sbjct: 235 VNVGSVIITKLDGHAKGGGALSAVAATNSPIIFIGTGEHIDDFESFKTKPFISKLLGMGD 294
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G +DK++E + +D EL++K+ G FTLR MYEQFQNI+KMGP Q+ M+PGFS +
Sbjct: 295 IEGLIDKVNE-LKLDDNEELIEKIKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFSQD 353
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMN--DSRIMRIARGSGRQVREVM 417
+ KG E+ES A++KR MT+MDSM + ELD+ + KL SRI+R+A+G+G +EV
Sbjct: 354 FLSKGSEQESMARLKRVMTIMDSMNDGELDNRDGAKLFTKQSSRIVRVAQGAGVTEKEVK 413
Query: 418 EMLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNA-------QHMSKVLPQGMLKQIG 469
+++ +Y + A + KM G+K + K G+M ++N+N Q M++++ +L+Q+G
Sbjct: 414 DLISQYTKFAAVVKKMGGIKGLFKGGDM---AKNVNQAQMTKLNQQMARMMDPRVLQQMG 470
Query: 470 GVGGLQNLMKQM-----GSTKDMMGMFGG 493
G+ GLQ++M+Q+ G ++MG FGG
Sbjct: 471 GMNGLQSMMRQLQQGAAGGLSNLMGGFGG 499
>gi|13542673|gb|AAH05543.1| Srp54c protein [Mus musculus]
Length = 500
Score = 567 bits (1461), Expect = e-159, Method: Compositional matrix adjust.
Identities = 278/470 (59%), Positives = 364/470 (77%), Gaps = 10/470 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNATII+E+VLN L E+ ALL+ADV KLV++++ N+K +
Sbjct: 1 MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENVKSAI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+L+++A+G NKR++IQ A+F EL K++DPG ++TP KGK +VIMFVGLQGSGKTTTC+K
Sbjct: 61 DLEEMASGLNKRKMIQHAVFKELVKLVDPGVKAWTPTKGKQNVIMFVGLQGSGKTTTCSK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY+Q+KGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGVE FK
Sbjct: 121 LAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
EN ++IIVDTSGRHKQE +LFEEM QVS A + PD +++VMD+SIGQA QA+AFK
Sbjct: 181 NENFEIIIVDTSGRHKQEDSLFEEMLQVSNA-IQPDNIVYVMDASIGQACEAQAKAFKDK 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V V +VIVTK+DGHAKGGGALSAVAATKSP+IFIGTGEH+D FE F +PF+S+LLGMGD
Sbjct: 240 VDVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDNFEPFKTQPFISKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G +DK++E + +D L++K G FTLR MYEQFQNI+KMGP Q+ M+PGF ++
Sbjct: 300 IEGLIDKVNE-LKLDDNKALIEKWKHGQFTLRDMYEQFQNIMKMGPFSQILGMIPGFGTD 358
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLM---NDSRIMRIARGSGRQVREVM 417
M KG E+ES A++K+ MT+MDSM ++ELDS++ + + RI R+ARGSG R++
Sbjct: 359 FMSKGNEQESMARLKKLMTIMDSMNDQELDSTDGAKVFSKHPGRIQRVARGSGVSTRDIQ 418
Query: 418 EMLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLK 466
E+L +Y + A++ KM G+K + K G+M S+N++ M+K L Q M K
Sbjct: 419 ELLTQYTKFAQMVKKMGGIKGLFKGGDM---SKNVSQSQMAK-LNQQMAK 464
>gi|449274766|gb|EMC83844.1| Signal recognition particle 54 kDa protein, partial [Columba livia]
Length = 500
Score = 567 bits (1460), Expect = e-159, Method: Compositional matrix adjust.
Identities = 277/470 (58%), Positives = 367/470 (78%), Gaps = 10/470 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNATII+E+VLN L E+ ALL+ADV KLV++++ N+K +
Sbjct: 1 MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENVKSAI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+L+++A+G NKR++IQ A+F EL K++DPG ++TP KGK ++IMFVGLQGSGKTTTC+K
Sbjct: 61 DLEEMASGLNKRKMIQHAVFKELVKLVDPGVKAWTPTKGKQNIIMFVGLQGSGKTTTCSK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++Q+KGWK L+CADT+RAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGVE FK
Sbjct: 121 LAYFYQRKGWKTCLICADTYRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
EN ++IIVDTSGRHKQE +LFEEM QV+ A + PD +++VMD+SIGQA QA+AFK
Sbjct: 181 NENFEIIIVDTSGRHKQEDSLFEEMLQVANA-IQPDNIVYVMDASIGQACEAQAKAFKDK 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V V +VIVTK+DGHAKGGGALSAVAATKSP+IFIGTGEH+D+FE F +PF+S+LLGMGD
Sbjct: 240 VDVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G +DK++E + +D L++KL G FTLR MYEQFQNI+KMGP Q+ M+PGF ++
Sbjct: 300 IEGLIDKVNE-LKLDDNEALIEKLKHGQFTLRDMYEQFQNIMKMGPFSQILGMIPGFGTD 358
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMNDS--RIMRIARGSGRQVREVM 417
M KG E+ES A++K+ MT+MDSM ++ELDS++ K+ + RI R+ARGSG R+V
Sbjct: 359 FMSKGNEQESMARLKKLMTIMDSMNDQELDSTDGAKVFSKQPGRIQRVARGSGVSTRDVQ 418
Query: 418 EMLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLK 466
E+L +Y + A++ KM G+K + K G+M S+N+N ++K L Q M K
Sbjct: 419 ELLTQYTKFAQMVKKMGGIKGLFKGGDM---SKNVNPSQLAK-LNQQMAK 464
>gi|26354843|dbj|BAC41048.1| unnamed protein product [Mus musculus]
Length = 502
Score = 566 bits (1458), Expect = e-158, Method: Compositional matrix adjust.
Identities = 276/480 (57%), Positives = 371/480 (77%), Gaps = 10/480 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNATII+E+VLN L E+ ALL+ADV KLV++++ N+K +
Sbjct: 1 MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENVKSAI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+L+++A+G N+R++IQ A+F EL K++DPG ++TP KGKP+VIMFVGLQGSGKTTTC+K
Sbjct: 61 DLEEMASGLNQRKMIQHAVFKELVKLVDPGVKAWTPTKGKPNVIMFVGLQGSGKTTTCSK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY+Q+KGWK L+CADTFRAGAFDQLKQNAT+A+IPFYGSYTE DPV IA EGVE F+
Sbjct: 121 LAYYYQRKGWKTCLICADTFRAGAFDQLKQNATQARIPFYGSYTEMDPVIIASEGVEKFQ 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
EN ++IIVDTSGRH+QE +LFEEM QVS A + PD +++VMD+SIGQA QA+AFK
Sbjct: 181 NENFEIIIVDTSGRHQQEDSLFEEMLQVSNA-IQPDNIVYVMDASIGQACEAQAKAFKDK 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V V +VIVTK+DGHAKGGGALSAVAATKSP+IFIGTGEH+D FE F +PF+S+LLGMGD
Sbjct: 240 VDVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDNFEPFKTQPFISKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G +DK++E + +D L++K G FTLR MYEQFQNI+KMGP Q+ M+PGF ++
Sbjct: 300 IEGLIDKVNE-LKLDDNKALIEKWKHGQFTLRDMYEQFQNIMKMGPFSQILGMIPGFGTD 358
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLM---NDSRIMRIARGSGRQVREVM 417
M KG E+ES A++K+ MT+MDSM ++ELDS++ + + RI R+ARGSG R++
Sbjct: 359 FMSKGNEQESMARLKKLMTIMDSMNDQELDSTDGAKVFSKHPGRIQRVARGSGVSTRDIQ 418
Query: 418 EMLEEYKRLAKIWSKMKGLK-IPKKGEMSA-LSRNMNA---QHMSKVLPQGMLKQIGGVG 472
E+L +Y + A++ KM G+K + K G+MS +S++ A Q M+K++ +L +GG+
Sbjct: 419 ELLTQYTKFAQMVKKMGGIKGLFKGGDMSKNVSQSQMAKLNQQMAKMMDPRVLHHMGGMA 478
>gi|193580274|ref|XP_001951515.1| PREDICTED: signal recognition particle 54 kDa protein-like isoform
1 [Acyrthosiphon pisum]
gi|328716940|ref|XP_003246080.1| PREDICTED: signal recognition particle 54 kDa protein-like isoform
2 [Acyrthosiphon pisum]
Length = 504
Score = 565 bits (1456), Expect = e-158, Method: Compositional matrix adjust.
Identities = 276/490 (56%), Positives = 375/490 (76%), Gaps = 16/490 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ ++NA++I+E+VLN L +I ALL+A+V LV++++ N++ ++
Sbjct: 1 MVLADLGRKITSALRGLNNASVINEEVLNSMLKDICAALLEANVNVMLVKKLRENVRNVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ D++A G NKRR+IQ A+F EL K++DPG S+ P KG+P++IMFVGLQGSGKTTTCTK
Sbjct: 61 DFDEMAGGLNKRRMIQSAVFKELVKLVDPGVKSYQPVKGRPNIIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY+ KK WK LVCADTFRAGA+DQLKQNATKA+IPFYGSYTE DPV IA +GV+ FK
Sbjct: 121 LAYYYLKKNWKTCLVCADTFRAGAYDQLKQNATKAQIPFYGSYTEVDPVVIAQDGVDMFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KE ++I+VDTSGRHKQEA+LFEEM QVS T+ PD ++FVMD++IGQA QA+AFK
Sbjct: 181 KEGFEIIVVDTSGRHKQEASLFEEMLQVSN-TIKPDNIVFVMDATIGQACEGQARAFKDK 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V++G+V++TK+DGHAKGGGALSAVAATKSP+IFIGTGEH+D+FE F KPFVS+LLGMGD
Sbjct: 240 VNIGSVVITKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTKPFVSKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G +DK++E + ++ EL++K+ G FT+R MYEQFQNI+KMGP Q+ M+PGFS +
Sbjct: 300 IEGLIDKVNE-LKLEDNEELIEKIKHGQFTIRDMYEQFQNIMKMGPFSQIMGMIPGFSQD 358
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQVREVM 417
+ KG E ES A++K+ MT+MDSM + ELD + KL RI+R+++G+G REV
Sbjct: 359 FLSKGSEMESMARLKKLMTIMDSMNDGELDHRDGAKLFTKQPGRIIRVSQGAGVTEREVR 418
Query: 418 EMLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQ-------GMLKQIG 469
E++ +Y + A + KM G+K + K G+M S+N+N M+K+ Q +L+QIG
Sbjct: 419 ELISQYTKFAGVVKKMGGIKGLFKSGDM---SKNVNPSQMAKLNQQITKMMDPRVLQQIG 475
Query: 470 GVGGLQNLMK 479
G+ GLQN+M+
Sbjct: 476 GMPGLQNVMR 485
>gi|387018700|gb|AFJ51468.1| signal recognition particle 54A [Crotalus adamanteus]
Length = 456
Score = 563 bits (1451), Expect = e-158, Method: Compositional matrix adjust.
Identities = 272/460 (59%), Positives = 360/460 (78%), Gaps = 9/460 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNATII+E+VLN L E+ ALL+ADV KLV++++ N+K +
Sbjct: 1 MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENVKSAI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+L+++A+G NKR++IQ A+F EL K++DPG ++TP KGK ++IMFVGLQGSGKTT+C+K
Sbjct: 61 DLEEMASGLNKRKMIQHAVFKELVKLVDPGVKAWTPTKGKQNIIMFVGLQGSGKTTSCSK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY+QKKGWK L+CADT+RAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGVE FK
Sbjct: 121 LAYYYQKKGWKTCLICADTYRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
EN ++IIVDTSGRHKQE +LFEEM QV+ A + PD +++VMD+SIGQA QA+AFK
Sbjct: 181 NENFEIIIVDTSGRHKQEDSLFEEMLQVANA-IQPDNIVYVMDASIGQACEAQAKAFKDK 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V V +VIVTK+DGHAKGGGALSAVAATKSP+IFIGTGEH+D+ E F +PF+S+LLGMGD
Sbjct: 240 VDVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDVEPFKTQPFISKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G +DK++E + +D L++KL G FTLR MYEQFQNI+KMGP Q+ M+PGF ++
Sbjct: 300 IEGLIDKVNE-LKLDDNEALIEKLKHGQFTLRDMYEQFQNIMKMGPFSQILGMIPGFGTD 358
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQVREVM 417
M KG E+ES A++K+ MT+MDSM ++ELDS++ K+ + RI R+ARGSG R+V
Sbjct: 359 FMSKGNEQESMARLKKLMTIMDSMNDQELDSTDGAKVFSKQPGRIQRVARGSGVSTRDVQ 418
Query: 418 EMLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNAQHM 456
E+L +Y + A++ KM G+K + K G+M S+N+N +
Sbjct: 419 ELLTQYTKFAQMVKKMGGIKGLFKGGDM---SKNVNPSQI 455
>gi|148298873|ref|NP_001091776.1| putative signal recognition particle 54 kDa protein [Bombyx mori]
gi|111608119|gb|ABH10803.1| putative signal recognition particle 54 kDa protein [Bombyx mori]
Length = 501
Score = 562 bits (1449), Expect = e-157, Method: Compositional matrix adjust.
Identities = 275/492 (55%), Positives = 370/492 (75%), Gaps = 16/492 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A+Q +S ATII+E+VLN L +I ALL+ADV +LV+ ++ N++ ++
Sbjct: 1 MVLADLGRKITTALQSLSRATIINEEVLNSMLKQICAALLEADVNIRLVKNLRENVRAVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ D++A G NKRR+IQ A+F EL K++DPG + P KGKP+VIM+VGLQGSGKTTTCTK
Sbjct: 61 DFDEMAGGLNKRRMIQSAVFKELVKLVDPGVKPYQPVKGKPNVIMYVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++ +K WK LVCADTFRAGA+DQ+KQN TKA+IPFYGSYTE DPV IA GV+ FK
Sbjct: 121 LAYHYLRKNWKSCLVCADTFRAGAYDQVKQNCTKARIPFYGSYTEVDPVVIATTGVDMFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
K+ ++IIVDTSGRHKQE +LFEEM V+ A + PD +IFVMD++IGQA QA+AFK
Sbjct: 181 KQGLEMIIVDTSGRHKQEESLFEEMLAVATA-IKPDNIIFVMDATIGQACEAQARAFKDK 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V +G+VI+TK+DGHAKGGGALSAVAAT+SP+IFIGTGEH+D+ E F KPF+ +LLGMGD
Sbjct: 240 VDIGSVIITKLDGHAKGGGALSAVAATQSPIIFIGTGEHIDDLEPFKTKPFIKKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G +DK++E + +D ELL+KL G FTLR MYEQFQNI+KMGP Q+ M+PGFS +
Sbjct: 300 IEGLLDKVNE-LKLDDNDELLEKLKHGQFTLRAMYEQFQNIMKMGPFSQIMGMIPGFSQD 358
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQVREVM 417
LM KG E+ES AK+K MT+MDSM ELD+ + KL + +RI R+A+G+G R+V
Sbjct: 359 LMSKGSEQESMAKLKLLMTIMDSMNEGELDNRDGAKLFSKQPTRITRVAQGAGVTERDVK 418
Query: 418 EMLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNA-------QHMSKVLPQGMLKQIG 469
+++ +Y + A + KM G+K + K G+M ++N+N Q M+K++ +L+Q+G
Sbjct: 419 DLIAQYTKFAAVVKKMGGIKGLFKGGDM---AKNVNQTQMVKLNQQMAKMMDPRLLQQMG 475
Query: 470 GVGGLQNLMKQM 481
G+ GL N+M+Q+
Sbjct: 476 GMSGLHNMMRQL 487
>gi|17539958|ref|NP_501507.1| Protein F21D5.7 [Caenorhabditis elegans]
gi|3876111|emb|CAA91040.1| Protein F21D5.7 [Caenorhabditis elegans]
Length = 496
Score = 562 bits (1448), Expect = e-157, Method: Compositional matrix adjust.
Identities = 279/500 (55%), Positives = 371/500 (74%), Gaps = 17/500 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I AI ++ +T+I+E L+ L E+ AL+++DV +LV++++ N+KK +
Sbjct: 1 MVLADLGRKIRNAIGKLGQSTVINEGELDLMLKEVCTALIESDVHIRLVKQLKDNVKKAI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N +++ G NKRR IQ+ +FNEL K++DPG FTP KG+ +V MFVGLQGSGKTTTCTK
Sbjct: 61 NFEEIVGGANKRRYIQKTVFNELLKLVDPGVTPFTPTKGRRNVFMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY+Q+KGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSY+E DPV+IA EGVE F
Sbjct: 121 MAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYSEIDPVKIAAEGVEKFT 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
+E ++IIVDTSGRHKQEA+LFEEM QVS A V PD V+FVMD+SIGQA QA+AF Q+
Sbjct: 181 QEGFEIIIVDTSGRHKQEASLFEEMLQVSNA-VTPDNVVFVMDASIGQACEAQARAFSQT 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V V +VI+TK+D HAKGGGALSAVA TKSPVIFIGTGEH+D+FE+F K FV +LLGMGD
Sbjct: 240 VDVASVIITKLDSHAKGGGALSAVAVTKSPVIFIGTGEHIDDFEIFKPKSFVQKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
+G +D ++++ D + EL+ +L +G FTLR MYEQFQNI+KMGP Q+ M+PGF SE
Sbjct: 300 IAGLVDMVNDIGIQDNK-ELVGRLKQGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFGSE 358
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLM---NDSRIMRIARGSGRQVREVM 417
M KG E+ES ++KR MT+MDSM+++ELD + +R+ R+ARGSG +EV
Sbjct: 359 FMTKGNEQESVNRLKRMMTVMDSMSDKELDHPKASELFTKEPNRVARVARGSGSHQQEVR 418
Query: 418 EMLEEYKRLAKIWSK---MKGLKIPKKGEMSALSRNMNA-------QHMSKVLPQGMLKQ 467
++L +YK+ + + K +KGL K G+++ +NMN Q M+K++ +L+Q
Sbjct: 419 DLLAQYKKFSDVVKKIGSIKGLFNGKNGDIN--PKNMNPAKMAQLNQQMAKMMDPRVLQQ 476
Query: 468 IGGVGGLQNLMKQMGSTKDM 487
+GG+GGLQN+M+QM M
Sbjct: 477 MGGMGGLQNMMQQMARAGKM 496
>gi|339239467|ref|XP_003381288.1| signal recognition protein [Trichinella spiralis]
gi|316975692|gb|EFV59096.1| signal recognition protein [Trichinella spiralis]
Length = 492
Score = 562 bits (1448), Expect = e-157, Method: Compositional matrix adjust.
Identities = 279/479 (58%), Positives = 365/479 (76%), Gaps = 13/479 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LG I AI +S+ATII+E+VL L E+ ALL+ADV +LV++++ ++K +
Sbjct: 1 MVLAELGRKIRNAIGSLSHATIINEEVLTSMLKEVCTALLEADVNIRLVKQLRESVKSQI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NL+++AAG NKRR+IQ+ +F EL K++DPG + P KG+P+VIMFVGLQG GKTTTCTK
Sbjct: 61 NLEEMAAGMNKRRLIQRVVFQELVKLVDPGVKQWQPTKGRPNVIMFVGLQGCGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY+QK+G K L+CADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGVE FK
Sbjct: 121 LAYYYQKRGMKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVVIAAEGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
+EN ++IIVDTSGRHKQE +LFEEM QV+ TV PD VI+VMD+SIGQA QA+AF +
Sbjct: 181 QENFEIIIVDTSGRHKQEESLFEEMLQVAN-TVQPDNVIYVMDASIGQACEAQARAFHEK 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V V +VIVTK+DGHA+GGGALSAVAAT SP+IFIGTGEH+D+FE F VKPFV +LLGMGD
Sbjct: 240 VDVASVIVTKLDGHARGGGALSAVAATGSPIIFIGTGEHIDDFEPFKVKPFVQKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G +DK++E + +D+ +LL+KL G FTLR MYEQFQNI+KMGP Q+ SM+PGF +
Sbjct: 300 LEGLIDKVNE-LKLDENDQLLEKLKHGQFTLRDMYEQFQNIMKMGPFSQIMSMIPGFGQD 358
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLM---NDSRIMRIARGSGRQVREVM 417
M KG E+ES ++KR MT+MDSM + ELD P + R R+ARGSG ++EV
Sbjct: 359 FMSKGNEQESAKRLKRLMTIMDSMNDNELDHLKPYELFQKQQGRFGRVARGSGTSIQEVK 418
Query: 418 EMLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRN------MNAQHMSKVLPQGMLKQIG 469
E++++YK+ A++ KM +K + K G+MS+ + N +N Q M+K++ +L+Q+G
Sbjct: 419 ELMQQYKKFAEMVKKMGSIKGLFKGGDMSSKTVNPAQLAKLN-QQMAKMMDPRVLQQMG 476
>gi|308462623|ref|XP_003093593.1| hypothetical protein CRE_02627 [Caenorhabditis remanei]
gi|308249610|gb|EFO93562.1| hypothetical protein CRE_02627 [Caenorhabditis remanei]
Length = 496
Score = 561 bits (1447), Expect = e-157, Method: Compositional matrix adjust.
Identities = 280/500 (56%), Positives = 370/500 (74%), Gaps = 17/500 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I AI ++ T+I+E+ L+ L E+ AL+++DV +LV++++ N+KK +
Sbjct: 1 MVLADLGRKIRNAIGKLGQNTVINEEELDLMLKEVCTALIESDVHIRLVKQLKDNVKKAI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N +++ G NKRR IQ+ +FNEL K++DPG +F P KGK +V MFVGLQGSGKTTTCTK
Sbjct: 61 NFEEIVGGANKRRYIQKTVFNELLKLVDPGVTAFQPTKGKRNVFMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY+Q+KGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSY+E DPV+IA EGVE F
Sbjct: 121 MAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYSEIDPVKIAAEGVEKFT 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KE ++IIVDTSGRHKQEA+LFEEM QVS A V PD V+FVMD+SIGQA QA+AF Q+
Sbjct: 181 KEGFEIIIVDTSGRHKQEASLFEEMLQVSNA-VTPDNVVFVMDASIGQACEAQARAFSQT 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V V +VI+TK+D HAKGGGALSAVA TKSPVIFIGTGEH+D+FE+F K FV +LLGMGD
Sbjct: 240 VDVASVIITKLDSHAKGGGALSAVAVTKSPVIFIGTGEHIDDFEIFKPKSFVQKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
+G +D ++++ D + EL+ +L +G FTLR MYEQFQNI+KMGP Q+ SM+PGF E
Sbjct: 300 IAGLVDMVNDIGIQDNK-ELVGRLKQGQFTLRDMYEQFQNIMKMGPFSQIMSMIPGFGPE 358
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLM---NDSRIMRIARGSGRQVREVM 417
M KG E+ES ++KR MT+MDSM+++ELD + +R+ R+ARGSG +EV
Sbjct: 359 FMNKGNEQESVNRLKRMMTVMDSMSDKELDHPKASELFTKEPNRVARVARGSGSHQQEVR 418
Query: 418 EMLEEYKRLAKIWSK---MKGLKIPKKGEMSALSRNMNA-------QHMSKVLPQGMLKQ 467
++L +YK+ + + K +KGL K G+++ +NMN Q M+K++ +L+Q
Sbjct: 419 DLLAQYKKFSDVVKKIGSIKGLFNGKNGDIN--PKNMNPAKMAQLNQQMAKMMDPRVLQQ 476
Query: 468 IGGVGGLQNLMKQMGSTKDM 487
+GG+GGLQN+M QM M
Sbjct: 477 MGGMGGLQNMMNQMARAGKM 496
>gi|402589104|gb|EJW83036.1| signal recognition particle protein SRP54 [Wuchereria bancrofti]
Length = 503
Score = 560 bits (1443), Expect = e-157, Method: Compositional matrix adjust.
Identities = 285/499 (57%), Positives = 372/499 (74%), Gaps = 25/499 (5%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I AI ++ ATII+E LN L E+ ALL+ADV +LV++++ N+KK +
Sbjct: 1 MVLADLGRKIRNAISKLGQATIINEDELNAMLKEVCAALLEADVNVRLVKQLKDNVKKTL 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ D++A G NKRR+IQ+ +F EL K++DPG F P KGKP++ MFVGLQGSGKTTTCTK
Sbjct: 61 DFDEMAGGVNKRRLIQRCVFTELMKLVDPGVKPFQPTKGKPNIFMFVGLQGSGKTTTCTK 120
Query: 121 YAYY----HQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGV 176
+ KKGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA GV
Sbjct: 121 SLFLVGILLPKKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVTIAANGV 180
Query: 177 ETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQA 236
+ FK++ ++IIVDTSGRHKQEA+LFEEM QVS A VNP ++FVMD+SIGQA QA+A
Sbjct: 181 DKFKEDGFEIIIVDTSGRHKQEASLFEEMLQVSNA-VNPSNIVFVMDASIGQACEAQARA 239
Query: 237 FKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLL 296
F ++V VG+VI+TK+D HAKGGGALSAVAAT SPVIFIGTGEH+D+FE F+VKPFV +LL
Sbjct: 240 FSETVDVGSVIITKLDSHAKGGGALSAVAATHSPVIFIGTGEHIDDFEPFEVKPFVQKLL 299
Query: 297 GMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPG 356
GMGD G + K++E+ D + EL+++L G FTLR MYEQFQNI+KMGP Q+ SM+PG
Sbjct: 300 GMGDIEGLVKKVNEIGIEDNE-ELIKRLKHGMFTLRDMYEQFQNIMKMGPFNQIMSMIPG 358
Query: 357 FSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND------SRIMRIARGSG 410
F + M KG E+ESQ+++K+ MT+MDSM++ ELD +PK ND R+ R+ARGSG
Sbjct: 359 FGPDFMSKGNEQESQSRLKKLMTIMDSMSDAELD--HPK-ANDLFSKEPGRVQRVARGSG 415
Query: 411 RQVREVMEMLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNA-------QHMSKVLPQ 462
EV E+L +YK+ A + KM +K + K G+M+ ++N+N Q M+K++
Sbjct: 416 TATSEVKELLTQYKKFADMVKKMGSMKGLFKNGDMN--TKNINPSQLQKLNQQMAKMMDP 473
Query: 463 GMLKQIGGVGGLQNLMKQM 481
+L+Q+GG+GGLQN+MKQ+
Sbjct: 474 RVLQQMGGMGGLQNMMKQL 492
>gi|386697073|gb|AFJ21997.1| signal recognition particle protein 54k, partial [Ctenacarus sp. 1
PBK-2011]
Length = 460
Score = 560 bits (1443), Expect = e-157, Method: Compositional matrix adjust.
Identities = 275/458 (60%), Positives = 356/458 (77%), Gaps = 10/458 (2%)
Query: 13 AIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKR 72
A++ + NATII+E+VL E L ++TRALL+ADV KLV+ ++ N++ +++ D++AAG NKR
Sbjct: 2 ALRSLGNATIINEEVLEELLKQVTRALLEADVNIKLVKTLRENVRSVIDFDEMAAGLNKR 61
Query: 73 RIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKP 132
R+IQ A+F EL K++DPG ++ P K + +++MFVGLQGSGKTTTCTK AYY+ +KGWK
Sbjct: 62 RMIQMAVFKELVKLVDPGVKAWQPAKNRTNIVMFVGLQGSGKTTTCTKMAYYYVRKGWKC 121
Query: 133 ALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTS 192
ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KE ++IIVDTS
Sbjct: 122 ALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIANEGVEQFTKEGFEIIIVDTS 181
Query: 193 GRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMD 252
GRHKQE++LFEEM +S T PDL+I+VMD+SIGQA QA+AFK V VGAVIVTK+D
Sbjct: 182 GRHKQESSLFEEMLAIS-TTTQPDLIIYVMDASIGQACEGQARAFKGKVDVGAVIVTKLD 240
Query: 253 GHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVV 312
GHA+GGGALSAVAAT+SP+IFIGTGEH+D+FE F VKPFVS+LLGMGD G +DK++E +
Sbjct: 241 GHARGGGALSAVAATQSPIIFIGTGEHIDDFEQFKVKPFVSKLLGMGDIEGLIDKVNE-L 299
Query: 313 PMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQA 372
+D EL++KL G FTLR MYEQF NI+KMGP Q+ +M+PGF ++LM E ES +
Sbjct: 300 KLDDNEELIEKLKHGEFTLRDMYEQFTNIMKMGPFNQILNMIPGFGADLMKGASEAESMS 359
Query: 373 KIKRYMTMMDSMTNEELDS-SNPKLMN--DSRIMRIARGSGRQVREVMEMLEEYKRLAKI 429
++KR MT+MDSM++ ELDS KL + +RI R+ARGSG REV E+L +Y + A +
Sbjct: 360 RLKRLMTIMDSMSDSELDSREGAKLFSKQTTRIQRVARGSGATQREVQELLTQYTKFAAV 419
Query: 430 WSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLK 466
KM G+K + K G+M ++N+N ++K L Q M K
Sbjct: 420 VKKMGGIKGLFKGGDM---TKNVNPAQLAK-LNQQMAK 453
>gi|289740969|gb|ADD19232.1| signal recognition particle subunit srp54 [Glossina morsitans
morsitans]
Length = 508
Score = 560 bits (1442), Expect = e-157, Method: Compositional matrix adjust.
Identities = 285/490 (58%), Positives = 377/490 (76%), Gaps = 16/490 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A+ +S AT+I+E+ LN L EI ALL+ADV +LV++++ N++ ++
Sbjct: 1 MVLADLGRKITTALHSLSKATVINEEALNSMLKEICAALLEADVNIRLVKQLRENVRAVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ D++A G NKRR+IQ A+F EL K++DPG + P KGK +VIMFVGLQGSGKTTTCTK
Sbjct: 61 DFDEMAGGLNKRRMIQSAVFKELIKLVDPGVKPYQPVKGKANVIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++QK+ WK LVCADTFRAGA+DQ+KQNATKA+IPFYGSYTE DPV IA EGVE FK
Sbjct: 121 LAYHYQKRNWKSCLVCADTFRAGAYDQIKQNATKARIPFYGSYTEIDPVVIAQEGVEMFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
+E ++IIVDTSGRHKQE +LFEEM V+ A +NPD +IFVMD++IGQA QA+AFK
Sbjct: 181 REGFEMIIVDTSGRHKQEESLFEEMLAVANA-INPDNIIFVMDATIGQACEAQAKAFKGK 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V +G+VI+TK+DGHAKGGGALSAVAAT+SP+IFIGTGEH+D+ E F +KPFVS+LLGMGD
Sbjct: 240 VDIGSVIITKLDGHAKGGGALSAVAATRSPIIFIGTGEHIDDMEPFKIKPFVSKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G +DK++E + +D ELL+K+ G FT+R MYEQFQNI+KMGP Q+ M+PGFS +
Sbjct: 300 IEGLIDKVNE-LKLDGNEELLEKIKHGQFTIRDMYEQFQNIMKMGPFSQIMGMIPGFSQD 358
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQVREVM 417
M KG E+ES A+IKR MTMMDSM++ ELD+ + KL + +RI+R+A+GSG REV
Sbjct: 359 FMTKGGEQESMARIKRMMTMMDSMSDGELDNRDGAKLFSKQPTRIVRVAQGSGVLEREVK 418
Query: 418 EMLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNA-------QHMSKVLPQGMLKQIG 469
E++ Y + A + KM G+K + K+G+M ++N+N Q M+K++ ML+Q+G
Sbjct: 419 ELISHYTKFAAVVKKMGGVKGLFKQGDM---TKNVNPTQMAKLNQQMAKMIDPRMLQQMG 475
Query: 470 GVGGLQNLMK 479
GVGGLQN+M+
Sbjct: 476 GVGGLQNMMR 485
>gi|291223336|ref|XP_002731666.1| PREDICTED: signal recognition particle 54kDa-like [Saccoglossus
kowalevskii]
Length = 492
Score = 560 bits (1442), Expect = e-157, Method: Compositional matrix adjust.
Identities = 286/491 (58%), Positives = 366/491 (74%), Gaps = 35/491 (7%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNAT+I+E VLN L+EI RALL+ADV K V++++ N++ ++
Sbjct: 1 MVLADLGRKITTALRSLSNATVINEDVLNSMLSEICRALLEADVNIKQVKKLRENVRSVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ D++AAG NKRR+IQ A+F EL K++DPG ++TP KGKP+VIMFVGLQGSGKTTTCTK
Sbjct: 61 DFDEMAAGLNKRRMIQSAVFKELVKLVDPGVKAWTPVKGKPNVIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++QKKGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGV+ FK
Sbjct: 121 LAYHYQKKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVVIAAEGVDKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KEN ++IIVDTSGRHKQE +LFEEM QVS T +PD VI+VMD++IGQA QA+AFK+
Sbjct: 181 KENFEIIIVDTSGRHKQEDSLFEEMLQVSNVT-SPDNVIYVMDATIGQACESQARAFKEK 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V V +VI+TK+DGHAKGGGALSAVAATKSP+IFIGTGEH+D+FE F KPFVS+LLGMGD
Sbjct: 240 VDVASVIITKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEQFKTKPFVSKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G +DK+ E + +D EL+ KL G +V SM+PGF S+
Sbjct: 300 IEGLIDKVSE-LNLDDNEELINKLKHGK-------------------KRVQSMIPGFGSD 339
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDS-SNPKLMNDS--RIMRIARGSGRQVREVM 417
+ KG E+ES A++KR MT+MDSM +EELDS KL S RI R+ARG+G VREV
Sbjct: 340 FLSKGNEQESMARLKRLMTIMDSMNDEELDSREGAKLFTRSQGRIQRVARGAGVSVREVQ 399
Query: 418 EMLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNA-------QHMSKVLPQGMLKQIG 469
E+L +Y++ A + KM G+K + K G+M +N+N Q M+K++ +L Q+G
Sbjct: 400 ELLSQYQKFAAMVKKMGGIKGLFKGGDM---MKNVNPSQMMKLNQQMAKMMDPRILHQMG 456
Query: 470 GVGGLQNLMKQ 480
G+GGLQN+MKQ
Sbjct: 457 GIGGLQNMMKQ 467
>gi|225710178|gb|ACO10935.1| Signal recognition particle 54 kDa protein [Caligus rogercresseyi]
Length = 509
Score = 560 bits (1442), Expect = e-157, Method: Compositional matrix adjust.
Identities = 277/491 (56%), Positives = 370/491 (75%), Gaps = 15/491 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A+ +S ATI+DE+VLN L E+ ALL+ADV +LV +++ N++ ++
Sbjct: 1 MVLADLGRKINNALSSLSKATIVDEEVLNGMLKELCAALLEADVNIRLVAKLRENVRGVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N +++A G NKR+II++A++ EL K++DPG F PKKG+ +VIMFVGLQ SGKTTTCTK
Sbjct: 61 NFEEMAQGLNKRQIIKEAVYLELVKLVDPGVEPFVPKKGRANVIMFVGLQDSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A+Y+QKKGWK LVCADTFRAGA+DQLKQNATKA+IPFYGSYTE DPV IA EGV TFK
Sbjct: 121 LAWYYQKKGWKACLVCADTFRAGAYDQLKQNATKARIPFYGSYTEPDPVVIANEGVNTFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
+E ++IIVDTSGRH QE ALFEEM VS A VNPD +IFVMD+SIGQA Q++AFK+
Sbjct: 181 EEGFEIIIVDTSGRHYQEDALFEEMLAVSNA-VNPDNIIFVMDASIGQACEAQSRAFKEK 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V VG+VI++K+D HAKGGGALSAVAATKSPV+FIGTGEH+D+FE F KPFV +LLGMGD
Sbjct: 240 VDVGSVIISKLDSHAKGGGALSAVAATKSPVVFIGTGEHIDDFEPFKTKPFVQKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G + K+ E + +L+ K+ G +T+R MYEQF N++KMGP Q+ SM+PGFS
Sbjct: 300 IVGLIKKVEE-CNFENNEDLINKIKHGEYTIRDMYEQFLNVMKMGPFSQILSMVPGFSQS 358
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLM--NDSRIMRIARGSGRQVREVME 418
M KG E++SQAK+K+ +T+MDSM ++ELD K+ SR+ RIA G+G EV+E
Sbjct: 359 FMAKGSEQQSQAKLKKMITIMDSMNDKELDDRGAKIFMKEPSRVARIAGGAGVMEMEVLE 418
Query: 419 MLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNAQHM-------SKVLPQGMLKQIGG 470
+L++Y++ ++ KM G+K + K G+M S+N+N Q M +K++ +L+QIGG
Sbjct: 419 LLKQYRQFEQVVKKMGGMKGLFKGGDM---SKNVNPQQMAQLNMQIAKMMDPTVLRQIGG 475
Query: 471 VGGLQNLMKQM 481
+ GLQN+++Q+
Sbjct: 476 MNGLQNMLRQL 486
>gi|386697075|gb|AFJ21998.1| signal recognition particle protein 54k, partial [Liochthonius sp.
AD1300]
Length = 464
Score = 559 bits (1441), Expect = e-156, Method: Compositional matrix adjust.
Identities = 274/461 (59%), Positives = 360/461 (78%), Gaps = 10/461 (2%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI ALL+ADV KLV+ ++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINKEVLDSLLKEICTALLEADVNIKLVKTLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+IQ A+F EL K++DPG ++ P+KG+ +++MFVGLQGSGKTTTCTK AYY+Q+KG
Sbjct: 63 NKRRMIQMAVFKELVKLVDPGVKAWQPQKGRTNIVMFVGLQGSGKTTTCTKMAYYYQRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F E +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNEGFEVLIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM +S+A V P+L+I+VMD+SIGQA QA+AFK V VGAVIVT
Sbjct: 183 DTSGRHKQESSLFEEMLAISQA-VQPNLIIYVMDASIGQACESQARAFKSKVDVGAVIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHA+GGGALSAVAAT+SP+IFIGTGEH+D+FE F VKPFVS+LLGMGD G +DK++
Sbjct: 242 KLDGHARGGGALSAVAATQSPIIFIGTGEHIDDFEQFKVKPFVSKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FTLR MYEQF NI+KMGP+ Q+ +M+PGF ++L+ E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTLRDMYEQFTNIMKMGPLNQILNMIPGFGADLIKGASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMNDS--RIMRIARGSGRQVREVMEMLEEYKRL 426
S A++KR MT+MDSM++ ELDS KL + R++R+ARGSG REV E+L +Y +
Sbjct: 361 SMARLKRLMTIMDSMSDSELDSREGAKLFSKQMPRMVRVARGSGVTTREVQELLTQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLK 466
A + KM G+K + K G+M ++N+N M K L Q M K
Sbjct: 421 AAVVKKMGGIKGLFKGGDM---AKNVNPAQMMK-LNQQMAK 457
>gi|386697093|gb|AFJ22007.1| signal recognition particle protein 54k, partial [Camisia segnis]
Length = 464
Score = 559 bits (1440), Expect = e-156, Method: Compositional matrix adjust.
Identities = 273/461 (59%), Positives = 361/461 (78%), Gaps = 10/461 (2%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I++A++ + NATII+++VL+ L EI +ALL+ADV KLV++++ N++ +++ D++AAG
Sbjct: 3 ITQALRSLGNATIINKEVLDGLLKEICKALLEADVNIKLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+IQ A+F EL K++DPG ++TP KG+ +++MFVGLQGSGKTTTCTK AYY+ +KG
Sbjct: 63 NKRRMIQMAVFKELVKLVDPGVKAWTPVKGRTNIVMFVGLQGSGKTTTCTKMAYYYVRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F E ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVIIASEGVEKFTNEGFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM +S T P+L+I+VMD+SIGQA QA+AFK V VGAVIVT
Sbjct: 183 DTSGRHKQESSLFEEMLAIS-TTTQPNLIIYVMDASIGQACESQARAFKNKVDVGAVIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHA+GGGALSAVAAT+SP+IFIGTGEH+D+FE F VKPFVS+LLGMGD G +DK++
Sbjct: 242 KLDGHARGGGALSAVAATQSPIIFIGTGEHIDDFEQFKVKPFVSKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FTLR MYEQF NI+KMGP Q+ +M+PGF ++L+ E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTLRDMYEQFTNIMKMGPFNQILNMIPGFGADLVKGASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL +RI+R++RGSG REV E+L +Y +
Sbjct: 361 SMSRLKRLMTIMDSMSDSELDSREGAKLFTKQPTRIVRVSRGSGVTQREVQELLTQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLK 466
A + KM G+K + K G+M ++N+N+ M+K L Q M K
Sbjct: 421 AAVVKKMGGIKGLFKGGDM---AKNVNSTQMAK-LNQQMAK 457
>gi|281342878|gb|EFB18462.1| hypothetical protein PANDA_011888 [Ailuropoda melanoleuca]
Length = 488
Score = 559 bits (1440), Expect = e-156, Method: Compositional matrix adjust.
Identities = 277/486 (56%), Positives = 372/486 (76%), Gaps = 12/486 (2%)
Query: 17 MSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQ 76
+++ I +VLN L E+ ALL+ADV KLV++++ N+K ++L+++A+G NKR++IQ
Sbjct: 1 LNSYVFIYLQVLNAMLKEVCTALLEADVNIKLVKQLRENVKSAIDLEEMASGLNKRKMIQ 60
Query: 77 QAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVC 136
A+F EL K++DPG ++TP KGK +VIMFVGLQGSGKTTTC+K AYY+Q+KGWK L+C
Sbjct: 61 HAVFKELVKLVDPGVKAWTPTKGKQNVIMFVGLQGSGKTTTCSKLAYYYQRKGWKTCLIC 120
Query: 137 ADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHK 196
ADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGVE FK EN ++IIVDTSGRHK
Sbjct: 121 ADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGVEKFKNENFEIIIVDTSGRHK 180
Query: 197 QEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAK 256
QE +LFEEM QV+ A + PD +++VMD+SIGQA QA+AFK V V +VIVTK+DGHAK
Sbjct: 181 QEDSLFEEMLQVANA-IQPDNIVYVMDASIGQACEAQAKAFKDKVDVASVIVTKLDGHAK 239
Query: 257 GGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQ 316
GGGALSAVAATKSP+IFIGTGEH+D+FE F +PF+S+LLGMGD G +DK++E + +D
Sbjct: 240 GGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLLGMGDIEGLIDKVNE-LKLDD 298
Query: 317 QPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKR 376
L++KL G FTLR MYEQFQNI+KMGP Q+ M+PGF ++ M KG E+ES A++K+
Sbjct: 299 NEALIEKLKHGQFTLRDMYEQFQNIMKMGPFSQILGMIPGFGTDFMSKGNEQESMARLKK 358
Query: 377 YMTMMDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKM 433
MT+MDSM ++ELDS++ K+ + RI R+ARGSG R+V E+L +Y + A++ KM
Sbjct: 359 LMTIMDSMNDQELDSTDGAKVFSKQPGRIQRVARGSGVSTRDVQELLTQYTKFAQMVKKM 418
Query: 434 KGLK-IPKKGEMSA-LSRNMNA---QHMSKVLPQGMLKQIGGVGGLQNLMKQM--GSTKD 486
G+K + K G+MS +S++ A Q M+K++ +L +GG+ GLQ++M+Q G+ +
Sbjct: 419 GGIKGLFKGGDMSKNVSQSQMAKLNQQMAKMMDPRVLHHMGGMAGLQSMMRQFQQGAAGN 478
Query: 487 MMGMFG 492
M GM G
Sbjct: 479 MKGMMG 484
>gi|386697071|gb|AFJ21996.1| signal recognition particle protein 54k, partial [Stigmalychus sp.
AD1318]
Length = 464
Score = 558 bits (1437), Expect = e-156, Method: Compositional matrix adjust.
Identities = 276/461 (59%), Positives = 357/461 (77%), Gaps = 10/461 (2%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII++ VL+ L EI ALL+ADV KLV++++ N++ +++ D++AAG
Sbjct: 3 ITSALRSLGNATIINKDVLDGLLKEICTALLEADVNIKLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+IQ A+F EL K++DPG ++ P KG+ +++MFVGLQGSGKTTTCTK AYY+ +KG
Sbjct: 63 NKRRMIQMAVFKELVKLVDPGVKAWQPVKGRTNIVMFVGLQGSGKTTTCTKMAYYYLRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK +LVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F E ++IIV
Sbjct: 123 WKCSLVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNEGFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM +S A V P+L+IFVMD+SIGQA QA+AFK V VGAVIVT
Sbjct: 183 DTSGRHKQESSLFEEMLAISTA-VEPNLIIFVMDASIGQACESQARAFKSKVDVGAVIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHA+GGGALSAVAAT+SP+IFIGTGEH+D+FE F VKPFVS+LLGMGD G +DK++
Sbjct: 242 KLDGHARGGGALSAVAATQSPIIFIGTGEHIDDFEQFKVKPFVSKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FTLR MYEQF NI+KMGP Q+ +M+PGF ++L+ E E
Sbjct: 302 E-LKLDDNQELIEKLKHGEFTLRDMYEQFTNIMKMGPFNQILNMIPGFGADLVKGASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S A++KR MTMMDSM++ ELDS KL + +RI R+ARGSG REV E+L +Y +
Sbjct: 361 SMARLKRLMTMMDSMSDNELDSREGAKLFSKQPTRIQRVARGSGVTQREVQELLTQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLK 466
A + KM G+K + K G+M ++N+N M+K L Q M K
Sbjct: 421 AAVVKKMGGIKGLFKGGDM---TKNVNQAQMAK-LNQQMAK 457
>gi|386697565|gb|AFJ22243.1| signal recognition particle protein 54k, partial [Xolalges sp. n.
AD600]
Length = 453
Score = 557 bits (1436), Expect = e-156, Method: Compositional matrix adjust.
Identities = 269/454 (59%), Positives = 356/454 (78%), Gaps = 9/454 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F ELCK+LDPG ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFKELCKLLDPGVKAWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LVI+VMD+SIGQA QA+AFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVIYVMDASIGQACESQARAFKNKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E+E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCTTEEE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL + +RI+R+ARGSG REV ++L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVARGSGVTQREVQDLLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 459
A + KM G+K + + G+ L++N+N+ M+K+
Sbjct: 421 AAVVKKMGGIKGLFRSGD---LTKNVNSVQMAKL 451
>gi|326435414|gb|EGD80984.1| signal recognition particle protein [Salpingoeca sp. ATCC 50818]
Length = 523
Score = 557 bits (1435), Expect = e-156, Method: Compositional matrix adjust.
Identities = 279/486 (57%), Positives = 368/486 (75%), Gaps = 8/486 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I A+ M++AT+IDE+V +E + +I RAL+++DVQ LV +++ NIK V
Sbjct: 1 MVLGDLGRKIKGALWNMTSATVIDEEVFDELVKDICRALIESDVQVGLVSKLRNNIKAAV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
DD AG N+RR IQ+A+F ELCK++DPG + PKK +P+VIMFVGLQGSGKTTTCTK
Sbjct: 61 QFDDSGAGVNRRRQIQRAVFTELCKLVDPGVTPWKPKKNQPNVIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++Q++GWK LVCADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA +GVE FK
Sbjct: 121 LAYHYQRRGWKACLVCADTFRAGAFDQLKQNATKARIPFYGSYTEIDPVVIAADGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
++ ++IIVDTSGRHKQE +LFEEM QVS A V+PD +IFVMD++IGQA QAQAFK
Sbjct: 181 QQGFEIIIVDTSGRHKQEDSLFEEMLQVSNA-VDPDNIIFVMDATIGQACQGQAQAFKDK 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V VGAVIVTK+DGHAKGGGALSAVAATKSP+++IGTGEH+D+ E F K FVS+LLGMGD
Sbjct: 240 VDVGAVIVTKLDGHAKGGGALSAVAATKSPIVYIGTGEHIDDLEPFQTKSFVSKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G M+++ E + +D+Q ++++++ G FT+R MYEQFQNI K+GP QV SM+PG +
Sbjct: 300 VQGLMERVSE-IGLDKQKDMMERIKAGVFTMRDMYEQFQNIQKLGPFSQVMSMIPGLGGD 358
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKL--MNDSRIMRIARGSGRQVREVM 417
L+ K E+ S ++KR+M +M SMT+EELDS N K+ M SR+ R+ARG+G EV
Sbjct: 359 LLGKAGEQASSDRLKRFMVIMRSMTDEELDSDNLAKMFQMQPSRVQRVARGAGVHPGEVE 418
Query: 418 EMLEEYKRLAKIWSKMKGLKIPKKG---EMSALSRNMNAQHMSKVLPQGMLKQIGGVGGL 474
+L+++K+ A++ KM G+K +G +SA + Q M+K++ +LKQ+GG+ GL
Sbjct: 419 ALLQQHKKFAELVKKMGGVKNLFQGNSDRVSAQQMSKLNQSMAKMMDPRVLKQMGGMNGL 478
Query: 475 QNLMKQ 480
Q LMK+
Sbjct: 479 QGLMKK 484
>gi|386697095|gb|AFJ22008.1| signal recognition particle protein 54k, partial [Malaconothrus
gracilis]
Length = 464
Score = 557 bits (1435), Expect = e-156, Method: Compositional matrix adjust.
Identities = 274/461 (59%), Positives = 359/461 (77%), Gaps = 10/461 (2%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L +I ALL+ADV KLV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINKEVLDGLLKDICTALLEADVNIKLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+IQ A+F EL K++DPG ++TP KGK +V+MFVGLQGSGKTTTCTK AYY+ +KG
Sbjct: 63 NKRRMIQMAVFKELVKLVDPGVKAWTPVKGKTNVVMFVGLQGSGKTTTCTKMAYYYVRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F E ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVIIASEGVEKFTNEGFEVIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM +S T P+L+I+VMD+SIGQA QA+AFK V VGAVIVT
Sbjct: 183 DTSGRHKQESSLFEEMLAIS-TTTQPNLIIYVMDASIGQACEGQARAFKNKVDVGAVIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHA+GGGALSAVAAT+SP+IFIGTGEH+D+FE F VKPFVS+LLGMGD G +DK++
Sbjct: 242 KLDGHARGGGALSAVAATQSPIIFIGTGEHIDDFEQFKVKPFVSKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FTLR MYEQF NI+KMGP Q+ +M+PGF ++L+ E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTLRDMYEQFTNIMKMGPFNQILNMIPGFGADLVKGASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL +RI+R++RGSG REV E+L +Y +
Sbjct: 361 SMSRLKRLMTIMDSMSDSELDSREGAKLFTKQPTRIIRVSRGSGVTQREVQELLTQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLK 466
A + KM G+K + K G+M ++N+N+ M+K L Q M K
Sbjct: 421 AAVVKKMGGIKGLFKGGDM---AKNVNSTQMAK-LNQQMAK 457
>gi|386697689|gb|AFJ22305.1| signal recognition particle protein 54k, partial [Alabidocarpus
intercalatus]
Length = 464
Score = 557 bits (1435), Expect = e-156, Method: Compositional matrix adjust.
Identities = 275/463 (59%), Positives = 357/463 (77%), Gaps = 10/463 (2%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG ++ P KGK ++IMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKAWQPIKGKTNIIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LVI+VMD+SIGQA QA+AFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVIYVMDASIGQACEAQAKAFKNKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL + +RI+R+ARGSG REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVARGSGVTQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
A + KM G+K + K G+ LS+N+N M+K L Q M K I
Sbjct: 421 AAVVKKMGGIKGLFKSGD---LSKNVNPAQMAK-LNQQMSKMI 459
>gi|386697145|gb|AFJ22033.1| signal recognition particle protein 54k, partial [Procalvolia sp.
AD1231]
Length = 453
Score = 556 bits (1434), Expect = e-156, Method: Compositional matrix adjust.
Identities = 267/454 (58%), Positives = 354/454 (77%), Gaps = 9/454 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI ALL++DV +LV++++ N++K+++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDNLLKEICTALLESDVNIRLVKQLRENVRKVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F ELCK+LDPG + P KG+P+V+MFVGLQG GKTTTCTK AY++ KKG
Sbjct: 63 NKRRMIMMAVFQELCKLLDPGVKPWQPVKGRPNVVMFVGLQGIGKTTTCTKMAYHYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKTALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIATEGVEKFIDENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM +S A V PDL+++VMD+SIGQA QA+AFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAIS-AAVQPDLIVYVMDASIGQACEAQAKAFKSKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAAT+SP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATQSPIIFIGTGEHIDEFEAFKVKPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + ++ ELL+KL G FTLR MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLEDNEELLEKLKHGEFTLRDMYEQLTNIMKMGPFNQILNMIPGFGAELSKNTSEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +K+KR MT+MDSM + ELDS KL + +R +R+ARG+G ++ EV E++ +Y +
Sbjct: 361 SMSKLKRMMTIMDSMADSELDSREGAKLFSKQPTRAVRVARGAGVRLCEVQELISQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 459
A + KM G+K + + G+ +S+N+N M+K+
Sbjct: 421 AAVVKKMGGIKGLFRAGD---ISKNVNPTQMAKL 451
>gi|386697569|gb|AFJ22245.1| signal recognition particle protein 54k, partial [Ingrassia sp.
AD1008]
Length = 464
Score = 556 bits (1433), Expect = e-156, Method: Compositional matrix adjust.
Identities = 274/463 (59%), Positives = 356/463 (76%), Gaps = 10/463 (2%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKKLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F ELCK+LDPG + P KG+ +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFQELCKLLDPGVKVWQPVKGRTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA GVE F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASGGVEKFTKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + PDLVI+VMD+SIGQA QA+AFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIEPDLVIYVMDASIGQACEAQARAFKNKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL + +RI+R+ARGSG REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVARGSGVTQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
A + KM G+K + K G+ L++N+N M++ L Q M K I
Sbjct: 421 AAVVKKMGGIKGLFKSGD---LTKNVNPAQMAR-LNQQMAKMI 459
>gi|386697495|gb|AFJ22208.1| signal recognition particle protein 54k, partial [Euroglyphus
maynei]
Length = 464
Score = 556 bits (1433), Expect = e-155, Method: Compositional matrix adjust.
Identities = 273/463 (58%), Positives = 358/463 (77%), Gaps = 10/463 (2%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++++++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDGLLKEICTALIESDVNIMLVKQLRENVRRVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I +A+F ELCK+LDP S+ P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMRAVFQELCKLLDPEVKSWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFSNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LVI+VMD+SIGQA QA+AFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVIYVMDASIGQACESQARAFKSKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVRPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL + +RI+R+ARG+G REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVARGAGVTQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
A + KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 421 AAVVKKMGGIKGLFKSGD---LTKNVNPAQMAK-LNQQMAKMI 459
>gi|386697559|gb|AFJ22240.1| signal recognition particle protein 54k, partial [Alloptes
calidridis]
Length = 464
Score = 556 bits (1432), Expect = e-155, Method: Compositional matrix adjust.
Identities = 274/463 (59%), Positives = 357/463 (77%), Gaps = 10/463 (2%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKAWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LVI+VMD+SIGQA QA+AFK+ V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVIYVMDASIGQACESQARAFKEKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL + +R+ R+ARGSG REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRMXRVARGSGVTQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
A + KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 421 AAVVKKMGGIKGLFKSGD---LAKNVNPAQMAK-LNQQMAKMI 459
>gi|386697409|gb|AFJ22165.1| signal recognition particle protein 54k, partial [Laminosioptidae
gen. sp. AD884]
Length = 464
Score = 556 bits (1432), Expect = e-155, Method: Compositional matrix adjust.
Identities = 275/463 (59%), Positives = 356/463 (76%), Gaps = 10/463 (2%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG S+ P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKSWQPIKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE FKKEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFKKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE +LFEEM + A + P+LVI+VMD+SIGQA QA+AFK V VGA+IVT
Sbjct: 183 DTSGRHKQETSLFEEMMAIQSA-IQPNLVIYVMDASIGQACEAQARAFKNKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL + +RI+R++RG+G REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVSRGAGVTQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
A + KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 421 AAVVKKMGGIKGLFKSGD---LTKNVNPAQMAK-LNQQMAKMI 459
>gi|386697497|gb|AFJ22209.1| signal recognition particle protein 54k, partial [Hirstia
chelidonis]
Length = 464
Score = 556 bits (1432), Expect = e-155, Method: Compositional matrix adjust.
Identities = 273/463 (58%), Positives = 358/463 (77%), Gaps = 10/463 (2%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++++++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDGLLKEICTALIESDVNIMLVKQLRENVRRVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I +A+F ELCK+LDP ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMRAVFQELCKLLDPEVKAWQPTKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LVI+VMD+SIGQA QA+AFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVIYVMDASIGQACEAQARAFKSKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVRPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL + +RI+R+ARGSG REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVARGSGVTQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
A + KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 421 AAVVKKMGGIKGLFKSGD---LTKNVNPAQMAK-LNQQMAKMI 459
>gi|194750277|ref|XP_001957554.1| GF23972 [Drosophila ananassae]
gi|190624836|gb|EDV40360.1| GF23972 [Drosophila ananassae]
Length = 508
Score = 556 bits (1432), Expect = e-155, Method: Compositional matrix adjust.
Identities = 283/490 (57%), Positives = 377/490 (76%), Gaps = 16/490 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A+ +S AT+I+E+ LN L EI ALL+ADV +LV++++ N++ ++
Sbjct: 1 MVLADLGRKITTALHSLSKATVINEEALNAMLKEICAALLEADVNIRLVKQLRENVRAVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ D++A G NKRR+IQ A+F EL K++DPG + P KGK +VIMFVGLQGSGKTTTCTK
Sbjct: 61 DFDEMAGGLNKRRMIQSAVFKELIKLVDPGVKPYQPIKGKANVIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++QK+ WK LVCADTFRAGA+DQ+KQNATKA+IPFYGSYTE DPV IA EGV+ FK
Sbjct: 121 LAYHYQKRNWKSCLVCADTFRAGAYDQIKQNATKARIPFYGSYTEIDPVVIAQEGVDMFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
+E ++IIVDTSGRHKQE +LFEEM V+ A VNPD +IFVMD++IGQA QA+AFK
Sbjct: 181 REGFEMIIVDTSGRHKQEESLFEEMLAVANA-VNPDNIIFVMDATIGQACEAQAKAFKDK 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V +G+VI+TK+DGHAKGGGALSAVAAT+SP+IFIGTGEH+D+ E F KPFVS+LLGMGD
Sbjct: 240 VDIGSVIITKLDGHAKGGGALSAVAATQSPIIFIGTGEHIDDLEPFKTKPFVSKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G +DK++E + +D ELL+K+ G+FT+R MYEQFQNI+KMGP Q+ +M+PGFS +
Sbjct: 300 IEGLIDKVNE-LKLDGNEELLEKIKHGHFTIRDMYEQFQNIMKMGPFSQIMNMIPGFSQD 358
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQVREVM 417
M KG E+ES A+IKR MTMMDSM++ ELD+ + KL + +R +R+A+G+G REV
Sbjct: 359 FMTKGGEQESMARIKRMMTMMDSMSDNELDNRDGAKLFSKQPTRSVRVAQGAGVLEREVK 418
Query: 418 EMLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNA-------QHMSKVLPQGMLKQIG 469
E++ Y + A + KM G+K + K+G+M ++N+N Q M+K++ ML+Q+G
Sbjct: 419 ELIAHYTKFAAVVKKMGGVKGLFKQGDM---TKNVNPNQMAKLNQQMAKMIDPRMLQQMG 475
Query: 470 GVGGLQNLMK 479
GVGGLQN+M+
Sbjct: 476 GVGGLQNMMR 485
>gi|386697407|gb|AFJ22164.1| signal recognition particle protein 54k, partial [Calamicoptes sp.
AD1253]
Length = 464
Score = 555 bits (1431), Expect = e-155, Method: Compositional matrix adjust.
Identities = 275/463 (59%), Positives = 356/463 (76%), Gaps = 10/463 (2%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIILVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG S+ P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKSWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE FKKEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVIIASEGVEKFKKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE +LFEEM + A + P+LVI+VMD+SIGQA QA+AFK V VGA+IVT
Sbjct: 183 DTSGRHKQETSLFEEMMAIQSA-IQPNLVIYVMDASIGQACEAQARAFKNKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL + +RI+R++RG+G REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVSRGAGVTQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
A + KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 421 AAVVKKMGGIKGLFKSGD---LAKNVNPAQMAK-LNQQMAKMI 459
>gi|386697337|gb|AFJ22129.1| signal recognition particle protein 54k, partial [Coraciacarus
americanus]
Length = 453
Score = 555 bits (1431), Expect = e-155, Method: Compositional matrix adjust.
Identities = 267/454 (58%), Positives = 354/454 (77%), Gaps = 9/454 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITSALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKR++I A+F L K+LDPG P++ P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRKMIMTAVFRNLVKLLDPGVPAWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IV
Sbjct: 123 WKTALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFSKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LV++VMD+SIGQA QA+AFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVVYVMDASIGQACESQARAFKNKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F+V+PF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFEVEPFISKLLGMGDIKGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCATEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL + +RI+R+ARGSG REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVARGSGVTQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 459
A + KM G+K + K G+ L++N+N M+K+
Sbjct: 421 AAVVKKMGGIKGLFKSGD---LTKNVNPAQMAKL 451
>gi|386697079|gb|AFJ22000.1| signal recognition particle protein 54k, partial [Eohypochthonius
(sen. str.) sp. AD1321]
Length = 464
Score = 555 bits (1431), Expect = e-155, Method: Compositional matrix adjust.
Identities = 272/461 (59%), Positives = 357/461 (77%), Gaps = 10/461 (2%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI ALL+ADV KLV++++ N++ +++ +++AAG
Sbjct: 3 ITTALRSLGNATIINKEVLDSLLKEICTALLEADVNIKLVKQLRENVRSVIDFEEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+IQ A+F EL K++DPG ++TP KG+ +++MFVGLQGSGKTTTCTK AYY+ +KG
Sbjct: 63 NKRRMIQMAVFKELVKLVDPGVKAWTPVKGRTNIVMFVGLQGSGKTTTCTKMAYYYVRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGV+ F E +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVDKFTNEGFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM +S T P+L+I+VMD+SIGQA QA+AFK V VGAVIVT
Sbjct: 183 DTSGRHKQESSLFEEMLAISN-TTQPNLIIYVMDASIGQACESQARAFKSKVDVGAVIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHA+GGGALSAVAAT+SP+IFIGTGEH+D+FE F VKPFVS+LLGMGD G +DK++
Sbjct: 242 KLDGHARGGGALSAVAATQSPIIFIGTGEHIDDFEQFKVKPFVSKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FTLR MYEQF NI+KMGP Q+ +M+PGF ++LM E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTLRDMYEQFTNIMKMGPFNQILNMIPGFGADLMKGASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S A++KR MT+MDSM++ ELDS KL +RI R+ARGSG REV E+L +Y +
Sbjct: 361 SMARLKRLMTIMDSMSDSELDSREGAKLFTKQPTRIQRVARGSGVTQREVQELLTQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLK 466
A + +M G+K + K G+M ++N+N M+K L Q M K
Sbjct: 421 AAVVKRMGGIKGLFKGGDM---AKNVNQAQMAK-LNQQMAK 457
>gi|386697077|gb|AFJ21999.1| signal recognition particle protein 54k, partial [Brachychthoniidae
gen. sp. 3 AD1301]
Length = 464
Score = 555 bits (1431), Expect = e-155, Method: Compositional matrix adjust.
Identities = 272/461 (59%), Positives = 359/461 (77%), Gaps = 10/461 (2%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI ALL+ADV KLV+ ++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINKEVLDSLLKEICTALLEADVNIKLVKTLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+IQ A+F EL K++DPG ++ P KG+ +++MFVGLQGSGKTTTCTK AYY+ +KG
Sbjct: 63 NKRRMIQMAVFKELVKLVDPGVKAWQPVKGRTNIVMFVGLQGSGKTTTCTKMAYYYLRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F E +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNEGFEVVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM +S+A V P+L+I+VMD+SIGQA QA+AFK V VGAVIVT
Sbjct: 183 DTSGRHKQESSLFEEMLAISQA-VQPNLIIYVMDASIGQACESQARAFKGKVDVGAVIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHA+GGGALSAVAAT+SP+IFIGTGEH+D+FE F VKPFVS+LLGMGD G +DK++
Sbjct: 242 KLDGHARGGGALSAVAATQSPIIFIGTGEHIDDFEQFKVKPFVSKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FTLR MYEQF NI+KMGP+ Q+ +M+PGF ++L+ E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTLRDMYEQFTNIMKMGPLNQILNMIPGFGADLIKGASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMNDS--RIMRIARGSGRQVREVMEMLEEYKRL 426
S A++KR MT+MDSM++ ELDS KL + R++R+ARGSG +EV E+L +Y +
Sbjct: 361 SMARLKRLMTIMDSMSDSELDSREGAKLFSKQAPRMVRVARGSGVTTKEVQELLTQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLK 466
A + KM G+K + K G+M ++N+N M+K L Q M K
Sbjct: 421 AAVVKKMGGIKGLFKGGDM---AKNVNPAQMAK-LNQQMAK 457
>gi|268564306|ref|XP_002647138.1| Hypothetical protein CBG16436 [Caenorhabditis briggsae]
Length = 496
Score = 555 bits (1430), Expect = e-155, Method: Compositional matrix adjust.
Identities = 278/500 (55%), Positives = 369/500 (73%), Gaps = 17/500 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I AI ++ T+I+E+ L+ L E+ AL+++DV +LV++++ N+K +
Sbjct: 1 MVLADLGRKIRNAIGKLGQNTVINEEELDLMLKEVCTALIESDVHIRLVKQLKDNVKNAI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N +++ G NKRR IQ+ +FNEL K++DPG FTP KGK +V MFVGLQGSGKTTTC+K
Sbjct: 61 NFEEIVGGANKRRYIQKTVFNELLKLVDPGVTPFTPTKGKRNVFMFVGLQGSGKTTTCSK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY+Q+KGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSY+E DPV+IA EGVE F
Sbjct: 121 MAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYSEIDPVKIAAEGVEKFT 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KE ++IIVDTSGRHKQEA+LFEEM QVS A V PD V+FVMD+SIGQA QA+AF Q+
Sbjct: 181 KEGFEIIIVDTSGRHKQEASLFEEMLQVSNA-VTPDNVVFVMDASIGQACEAQARAFSQT 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V V +VI+TK+D HAKGGGALSAVA TKSPVIFIGTGEH+D+FE+F K FV +LLGMGD
Sbjct: 240 VDVASVIITKLDSHAKGGGALSAVAVTKSPVIFIGTGEHIDDFEIFKPKSFVQKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
+G +D ++++ D + EL+ +L +G FTLR MYEQFQNI+KMGP Q+ M+PGF E
Sbjct: 300 IAGLVDMVNDIGISDNK-ELVGRLKQGQFTLRDMYEQFQNIMKMGPFSQIMVMIPGFGPE 358
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLM---NDSRIMRIARGSGRQVREVM 417
M KG E+ES ++KR MT+MDSM+++ELD + +R+ R+ARGSG +EV
Sbjct: 359 FMNKGNEQESVNRLKRMMTVMDSMSDKELDHPKASELFTKEPNRVARVARGSGCFQQEVR 418
Query: 418 EMLEEYKRLAKIWSK---MKGLKIPKKGEMSALSRNMNA-------QHMSKVLPQGMLKQ 467
++L +YK+ + + K +KGL K G+++ +NMN Q M+K++ +L+Q
Sbjct: 419 DLLSQYKKFSDVVKKIGSIKGLFNGKNGDIN--PKNMNPAKMAQLNQQMAKMMDPRVLQQ 476
Query: 468 IGGVGGLQNLMKQMGSTKDM 487
+GG+GGLQN+M+QM M
Sbjct: 477 MGGMGGLQNMMQQMARAGKM 496
>gi|386697491|gb|AFJ22206.1| signal recognition particle protein 54k, partial [Gymnoglyphus
longior]
Length = 464
Score = 555 bits (1430), Expect = e-155, Method: Compositional matrix adjust.
Identities = 273/463 (58%), Positives = 357/463 (77%), Gaps = 10/463 (2%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++++++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDGLLKEICTALIESDVNIMLVKQLRENVRRVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I +A+F ELCK+LDP + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMRAVFQELCKLLDPEVKVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFSNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LVI+VMD+SIGQA QA+AFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVIYVMDASIGQACESQARAFKSKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVRPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL + +RI+R+ARGSG REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVARGSGVTQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
A + KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 421 AAVVKKMGGIKGLFKSGD---LTKNVNPAQMAK-LNQQMAKMI 459
>gi|386697069|gb|AFJ21995.1| signal recognition particle protein 54k, partial [Alicorhagia sp.
AD1316]
Length = 464
Score = 555 bits (1429), Expect = e-155, Method: Compositional matrix adjust.
Identities = 273/461 (59%), Positives = 356/461 (77%), Gaps = 10/461 (2%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI ALL+ADV KLV++++ N++ +++ D++AAG
Sbjct: 3 ITSALRSLGNATIINKEVLDGLLKEICTALLEADVNIKLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+IQ A+F EL K++DPG ++ P KG+P+++MFVGLQGSGKTTTCTK +YY+ +KG
Sbjct: 63 NKRRMIQMAVFKELVKLVDPGVKAWQPVKGRPNIVMFVGLQGSGKTTTCTKMSYYYVRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F E ++I+V
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIAQEGVEKFTNEGFEIIVV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM +S TV P+L+IFVMD+SIGQA QA+AF V VGAVIVT
Sbjct: 183 DTSGRHKQESSLFEEMLAISN-TVQPNLIIFVMDASIGQACESQAKAFSSKVDVGAVIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAAT SP+IFIGTGEH+D+FE F VKPFVS+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATGSPIIFIGTGEHIDDFEQFKVKPFVSKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D+ EL++KL G FTLR MYEQF NI+KMGP Q+ +M+PGF ++L+ E E
Sbjct: 302 E-LKLDENEELIEKLKHGEFTLRDMYEQFTNIMKMGPFNQILNMIPGFGADLVKGASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS K+ +RI R+ARGSG REV E+L +Y +
Sbjct: 361 SMSRLKRLMTIMDSMSDSELDSKEGAKIFTKQATRIQRVARGSGVTQREVQELLTQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLK 466
A + KM G+K + K G+M ++N+N M K L Q M K
Sbjct: 421 AAVVKKMGGIKGLFKGGDM---TKNVNQAQMMK-LNQQMAK 457
>gi|386697325|gb|AFJ22123.1| signal recognition particle protein 54k, partial [Gabucinia sp. B
PBK-2011]
Length = 464
Score = 555 bits (1429), Expect = e-155, Method: Compositional matrix adjust.
Identities = 271/463 (58%), Positives = 358/463 (77%), Gaps = 10/463 (2%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITSALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKR++I A+F L K+LDPG P++ P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRKMIMTAVFRNLVKLLDPGVPAWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFSKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LV++VMD+SIGQA QA+AFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVVYVMDASIGQACESQARAFKNKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F+V+PF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFEVEPFISKLLGMGDIKGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL + +RI+R+ARGSG REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVARGSGVTQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
A + KM G+K + + G+ L++N+N M+K L Q M K I
Sbjct: 421 AAVVKKMGGIKGLFRSGD---LAKNVNPAQMAK-LNQQMAKMI 459
>gi|386697571|gb|AFJ22246.1| signal recognition particle protein 54k, partial [Vingrassia
velata]
Length = 464
Score = 555 bits (1429), Expect = e-155, Method: Compositional matrix adjust.
Identities = 275/463 (59%), Positives = 356/463 (76%), Gaps = 10/463 (2%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKKLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFQELVKLLDPGVKVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK +LVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN ++IIV
Sbjct: 123 WKCSLVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LVI+VMD+SIGQA QA+AFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVIYVMDASIGQACEAQAKAFKAKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL + +RI+R+ARGSG REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVARGSGVTQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
A + KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 421 AAVVKKMGGIKGLFKSGD---LTKNVNPAQMAK-LNQQMAKMI 459
>gi|386697537|gb|AFJ22229.1| signal recognition particle protein 54k, partial [Calcealges sp. n.
AD770]
Length = 464
Score = 555 bits (1429), Expect = e-155, Method: Compositional matrix adjust.
Identities = 274/463 (59%), Positives = 356/463 (76%), Gaps = 10/463 (2%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG + P KG+ +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKVWQPVKGRTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LVI+VMD+SIGQA QA+AFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVIYVMDASIGQACEPQARAFKNKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL + +RI+R+ARGSG REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVARGSGVTQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
A + KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 421 AAVVKKMGGIKGLFKSGD---LTKNVNPSQMAK-LNQQMAKMI 459
>gi|386697505|gb|AFJ22213.1| signal recognition particle protein 54k, partial [Dermatophagoides
pteronyssinus]
gi|386697507|gb|AFJ22214.1| signal recognition particle protein 54k, partial [Dermatophagoides
evansi]
Length = 464
Score = 555 bits (1429), Expect = e-155, Method: Compositional matrix adjust.
Identities = 272/463 (58%), Positives = 358/463 (77%), Gaps = 10/463 (2%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++++++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDGLLKEICTALIESDVNIMLVKQLRENVRRVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I +A+F ELCK+LDP ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMRAVFQELCKLLDPEVKAWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFSNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LVI+VMD+SIGQA QA+AFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVIYVMDASIGQACESQARAFKSKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVRPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL + +RI+R+ARG+G REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVARGAGVTQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
A + KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 421 AAVVKKMGGIKGLFKSGD---LTKNVNPAQMAK-LNQQMAKMI 459
>gi|386697511|gb|AFJ22216.1| signal recognition particle protein 54k, partial [Onychalges sp. 1
PBK-2011]
Length = 464
Score = 554 bits (1428), Expect = e-155, Method: Compositional matrix adjust.
Identities = 272/463 (58%), Positives = 357/463 (77%), Gaps = 10/463 (2%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++++++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDGLLKEICTALIESDVNIMLVKQLRENVRRVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F ELCK+LDP ++ P KG+ +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMSAVFQELCKLLDPEVKAWQPIKGRTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFSNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + PDLVI+VMD+SIGQA QA+AFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPDLVIYVMDASIGQACEAQARAFKSKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVRPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL + +RI+R+ARG+G REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVARGAGVTQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
A + KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 421 AAVVKKMGGIKGLFKSGD---LTKNVNPAQMAK-LNQQMAKMI 459
>gi|386697667|gb|AFJ22294.1| signal recognition particle protein 54k, partial [Prolistrophorus
sp. n. AD725]
Length = 464
Score = 554 bits (1428), Expect = e-155, Method: Compositional matrix adjust.
Identities = 273/463 (58%), Positives = 356/463 (76%), Gaps = 10/463 (2%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV KLV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLREICTALIESDVNIKLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I ++F EL K+LDPG ++ P KG+ +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMSVFKELVKLLDPGVKAWQPVKGRTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
W+ ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WRCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFSSENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + PDLVI+VMD+SIGQA QA+AFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPDLVIYVMDASIGQACEAQAKAFKDKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF EL E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGPELAKCASETE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL + +RI+R+ARGSG REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVARGSGVTQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
A + KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 421 AAVVKKMGGIKGLFKSGD---LTKNVNPAQMAK-LNQQMAKMI 459
>gi|386697555|gb|AFJ22238.1| signal recognition particle protein 54k, partial [Alloptes
obtusolobus]
Length = 464
Score = 554 bits (1428), Expect = e-155, Method: Compositional matrix adjust.
Identities = 273/463 (58%), Positives = 357/463 (77%), Gaps = 10/463 (2%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKAWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGV+ F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVDKFAKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A ++P+LVI+VMD+SIGQA QA+AFK+ V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAISPNLVIYVMDASIGQACESQARAFKEKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK+
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVS 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL +RI+R+ARG+G REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDPELDSREGAKLFTKQPTRIVRVARGAGVTQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
A + KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 421 AAVVKKMGGIKGLFKSGD---LTKNVNPAQMAK-LNQQMAKMI 459
>gi|386697203|gb|AFJ22062.1| signal recognition particle protein 54k, partial [Horstia sp.
AD1229]
Length = 464
Score = 554 bits (1428), Expect = e-155, Method: Compositional matrix adjust.
Identities = 273/463 (58%), Positives = 357/463 (77%), Gaps = 10/463 (2%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ AI+ + N+TII+++VL+ L EI AL+++DV +LV++++ N++ +++ D++AAG
Sbjct: 3 ITTAIRSLGNSTIINQEVLDNMLKEICAALIESDVNIQLVKKLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+FNEL K+LDPG ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ +KG
Sbjct: 63 NKRRMIMMAVFNELVKLLDPGVKAWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEVVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM +S A + P+L+++VMD+SIGQA QA+AFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAIS-AAIQPNLIVYVMDASIGQACEAQAKAFKSKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAAT SP+IFIGTGEH+DEFE+F VKPF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATGSPIIFIGTGEHIDEFELFKVKPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FTLR MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTLRDMYEQLTNIMKMGPFNQILNMIPGFGAELSKCTSEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM + ELDS KL + +RI+RIARGSG REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMADSELDSREGTKLFSKQPTRIVRIARGSGVTQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
A + KM G+K + K G+ L++N+N M+K L Q M + I
Sbjct: 421 AAVVKKMGGIKGLFKSGD---LAKNVNPAQMAK-LNQQMARMI 459
>gi|386697201|gb|AFJ22061.1| signal recognition particle protein 54k, partial [Horstia sp.
AD301]
Length = 453
Score = 554 bits (1428), Expect = e-155, Method: Compositional matrix adjust.
Identities = 269/454 (59%), Positives = 353/454 (77%), Gaps = 9/454 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ AI+ + N+TII+++VL+ L EI AL+++DV +LV++++ N++ +++ D++AAG
Sbjct: 3 ITTAIRSLGNSTIINQEVLDNMLKEICAALIESDVNIQLVKKLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+FNEL K+LDPG ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ +KG
Sbjct: 63 NKRRMIMMAVFNELVKLLDPGVKAWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEVVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM +S A + P+L+++VMD+SIGQA QA+AFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAIS-AAIQPNLIVYVMDASIGQACEAQAKAFKSKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAAT SP+IFIGTGEH+DEFE+F VKPF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATGSPIIFIGTGEHIDEFELFKVKPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FTLR MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTLRDMYEQLTNIMKMGPFNQILNMIPGFGAELSKCTSEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM + ELDS KL + +RI+RIARGSG REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMADSELDSREGTKLFSKQPTRIVRIARGSGVTQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 459
A + KM G+K + K G+ L++N+N M+K+
Sbjct: 421 AAVVKKMGGIKGLFKSGD---LAKNVNPAQMAKL 451
>gi|386697101|gb|AFJ22011.1| signal recognition particle protein 54k, partial [Trhypochthonius
cladonicola]
Length = 464
Score = 554 bits (1428), Expect = e-155, Method: Compositional matrix adjust.
Identities = 271/461 (58%), Positives = 358/461 (77%), Gaps = 10/461 (2%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L +I ALL+ADV KLV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINKEVLDGLLKDICTALLEADVNIKLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+IQ A+F EL K++DPG ++ P KG+ +++MFVGLQGSGKTTTCTK AYY+ +KG
Sbjct: 63 NKRRMIQMAVFKELVKLVDPGVKAWQPVKGRTNIVMFVGLQGSGKTTTCTKMAYYYVRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F E ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVIIASEGVEKFTNEGFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM +S T P+L+I+VMD+SIGQA QA+AFK V VGAVIVT
Sbjct: 183 DTSGRHKQESSLFEEMLAIS-TTTQPNLIIYVMDASIGQACESQARAFKNKVDVGAVIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHA+GGGALSAVAAT+SP+IFIGTGEH+D+FE F VKPFVS+LLGMGD G +DK++
Sbjct: 242 KLDGHARGGGALSAVAATQSPIIFIGTGEHIDDFEQFKVKPFVSKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FTLR MYEQF NI+KMGP Q+ +M+PGF ++L+ E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTLRDMYEQFTNIMKMGPFNQILNMIPGFGADLVKGASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL +RI+R++RGSG REV E+L +Y +
Sbjct: 361 SMSRLKRLMTIMDSMSDSELDSREGAKLFTKQPTRIIRVSRGSGVTQREVQELLTQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLK 466
A + KM G+K + K G+M ++N+N+ M+K L Q M K
Sbjct: 421 AAVVKKMGGIKGLFKGGDM---AKNVNSTQMAK-LNQQMAK 457
>gi|386697561|gb|AFJ22241.1| signal recognition particle protein 54k, partial [Ingrassiella sp.
AD765]
Length = 464
Score = 554 bits (1427), Expect = e-155, Method: Compositional matrix adjust.
Identities = 272/463 (58%), Positives = 357/463 (77%), Gaps = 10/463 (2%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV KLV++++ N++ +++ +++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIKLVKQLRENVRSVIDFNEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F ELC +LDPG ++ P KGK +VIMFVGLQG GKTTTCTK AYY KKG
Sbjct: 63 NKRRMIMMAVFQELCNILDPGVKAWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYFMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LVI+VMD+SIGQA QA+AFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVIYVMDASIGQACEAQARAFKDKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVRPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D +L++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLDDNEDLIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL + +RI+R+ARGSG REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIIRVARGSGVTQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
A + KM G+K + + G+ L++N+N+ M+K L Q M K I
Sbjct: 421 AAVVKKMGGIKGLFRSGD---LTKNVNSAQMAK-LNQQMAKMI 459
>gi|386697415|gb|AFJ22168.1| signal recognition particle protein 54k, partial [Megninia
ginglymura]
Length = 464
Score = 554 bits (1427), Expect = e-155, Method: Compositional matrix adjust.
Identities = 274/463 (59%), Positives = 356/463 (76%), Gaps = 10/463 (2%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFQELVKLLDPGVKVWQPAKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LVI+VMD+SIGQA QA+AFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVIYVMDASIGQACEAQARAFKNKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL + +RI+R+ARGSG REV ++L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVARGSGVTQREVQDLLNQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
A + KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 421 AAVVKKMGGIKGLFKSGD---LAKNVNPAQMAK-LNQQMAKMI 459
>gi|386697677|gb|AFJ22299.1| signal recognition particle protein 54k, partial [Listrophorus
squamiferus]
Length = 464
Score = 554 bits (1427), Expect = e-155, Method: Compositional matrix adjust.
Identities = 273/463 (58%), Positives = 356/463 (76%), Gaps = 10/463 (2%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV KLV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLREICTALIESDVNIKLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I ++F EL K+LDPG S+ P KG+ +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMSVFKELVKLLDPGVKSWQPVKGRTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
W+ ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WRCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFSNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LVI+VMD+SIGQA QA+AFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVIYVMDASIGQACEAQAKAFKDKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF EL E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGPELAKCASETE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL + +RI+R+ARGSG REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVARGSGVTQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
A + KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 421 AAVVKKMGGIKGLFKSGD---LTKNVNPAQMAK-LNQQMAKMI 459
>gi|209879780|ref|XP_002141330.1| signal recognition particle protein SRP54 [Cryptosporidium muris
RN66]
gi|209556936|gb|EEA06981.1| signal recognition particle protein SRP54, putative
[Cryptosporidium muris RN66]
Length = 497
Score = 554 bits (1427), Expect = e-155, Method: Compositional matrix adjust.
Identities = 272/497 (54%), Positives = 368/497 (74%), Gaps = 7/497 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LG ++ AI+++ +ATI+DE ++ CL EI ALLQADV KLV +++ NIKK +
Sbjct: 1 MVLAELGTQLTAAIKKLQSATIVDEATIDNCLREIATALLQADVNVKLVAQLRNNIKKAI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ +KRR+IQ ++ EL K+L P + + P K K ++++FVGLQGSGKTTTCTK
Sbjct: 61 SSQGNLQVASKRRLIQASVVEELVKILTPQRKPYVPTKDKCNIVVFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YA+Y+Q+KGWK ALVCADTFRAGAFDQLKQNATKAKIPFYGSYTE+DPV+IA +GV+ F+
Sbjct: 121 YAHYYQRKGWKTALVCADTFRAGAFDQLKQNATKAKIPFYGSYTETDPVKIASDGVKEFR 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
+N DLIIVDTSGRHKQE++LF EM+Q+ +T PD V+FVMDS IGQA +DQA AF
Sbjct: 181 DDNYDLIIVDTSGRHKQESSLFVEMQQIVLST-KPDNVVFVMDSHIGQACYDQALAFCSV 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
+ VG+VI+TK+DGHAKGGGALSAVAAT +P+IFIGTGEH D+FE F+ + FVSRLLG+GD
Sbjct: 240 IDVGSVIITKLDGHAKGGGALSAVAATSAPIIFIGTGEHFDDFEPFETRGFVSRLLGLGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
SG KI+EVVP+D+QPE++ ++ +G FTLR MYEQFQN+L MG + SM+PGF
Sbjct: 300 ISGLFAKINEVVPIDKQPEMVNRIVQGIFTLRDMYEQFQNMLNMGSPSALLSMIPGFGPN 359
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEML 420
+ K E+ +++R+M +MDSMT+ ELD N + M SRI R+A GSG V EV ++L
Sbjct: 360 FLAKEDEQAGITRLRRFMVIMDSMTDAELD--NTESMISSRITRVAIGSGTNVCEVQDLL 417
Query: 421 EEYKRLAKIWSKMKGLKIPKKGEMSALSRNMN-AQHMSKVLPQGMLKQIGGVGGLQNLMK 479
+YK AK+ ++ + + KKG+M +L ++ Q M +++ MLKQ+GG + N+MK
Sbjct: 418 NQYKTFAKMVGQIGKMGLGKKGDMGSLKNPLHFMQKMQRMIDPRMLKQLGGSNSMFNMMK 477
Query: 480 Q---MGSTKDMMGMFGG 493
+ M ++ D+ +F G
Sbjct: 478 EMEKMENSPDLQKLFRG 494
>gi|386697405|gb|AFJ22163.1| signal recognition particle protein 54k, partial [Rallicoptes aff.
gallinulae AD992]
Length = 460
Score = 554 bits (1427), Expect = e-155, Method: Compositional matrix adjust.
Identities = 274/460 (59%), Positives = 354/460 (76%), Gaps = 10/460 (2%)
Query: 13 AIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKR 72
A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG NKR
Sbjct: 2 ALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGLNKR 61
Query: 73 RIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKP 132
R+I A+F EL K+LDPG S+ P KGK +VIMFVGLQG GKTTTCTK AYY+ KKGWK
Sbjct: 62 RMIMMAVFKELVKLLDPGVKSWQPIKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKGWKC 121
Query: 133 ALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTS 192
ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE FKKEN +++IVDTS
Sbjct: 122 ALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFKKENFEIVIVDTS 181
Query: 193 GRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMD 252
GRHKQE +LFEEM + A + P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK+D
Sbjct: 182 GRHKQETSLFEEMMAIQSA-IQPNLVIYVMDASIGQACEAQARAFKNKVDVGAIIVTKLD 240
Query: 253 GHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVV 312
GHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E +
Sbjct: 241 GHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVNE-L 299
Query: 313 PMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQA 372
+D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES +
Sbjct: 300 KLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAESMS 359
Query: 373 KIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKI 429
++KR MT+MDSM++ ELDS KL + +RI+R++RG+G REV E+L +Y + A +
Sbjct: 360 RLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIIRVSRGAGVTQREVQELLSQYTKFAAV 419
Query: 430 WSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 420 VKKMGGIKGLFKSGD---LAKNVNPAQMAK-LNQQMAKMI 455
>gi|386697601|gb|AFJ22261.1| signal recognition particle protein 54k, partial [Proctophyllodes
sp. n. AD681]
gi|386697603|gb|AFJ22262.1| signal recognition particle protein 54k, partial [Proctophyllodes
stylifer]
gi|386697605|gb|AFJ22263.1| signal recognition particle protein 54k, partial [Proctophyllodes
reguli]
gi|386697607|gb|AFJ22264.1| signal recognition particle protein 54k, partial [Proctophyllodes
hipposideros]
Length = 464
Score = 554 bits (1427), Expect = e-155, Method: Compositional matrix adjust.
Identities = 269/454 (59%), Positives = 353/454 (77%), Gaps = 9/454 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LVI+VMD+SIGQA QA+AFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVIYVMDASIGQACEAQAKAFKNKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL + +R++R++RG+G REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRLIRVSRGAGVTQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 459
A + KM G+K + K G+ L++N+N+ MSK+
Sbjct: 421 AAVVKKMGGIKGLFKTGD---LAKNVNSAQMSKL 451
>gi|386697147|gb|AFJ22034.1| signal recognition particle protein 54k, partial
[Thalassophagacarus faime]
Length = 453
Score = 554 bits (1427), Expect = e-155, Method: Compositional matrix adjust.
Identities = 267/454 (58%), Positives = 354/454 (77%), Gaps = 9/454 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI ALL++DV +LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDNLLKEICTALLESDVNIRLVKQLRENVRNVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F ELCK+LDPG + P KG+P+V+MFVGLQG GKTTTCTK AY++ KKG
Sbjct: 63 NKRRMIMMAVFQELCKLLDPGVKPWQPVKGRPNVVMFVGLQGIGKTTTCTKMAYHYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F +N +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIATEGVEKFIDDNFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM +S A V PDL+++VMD+SIGQA QA+AFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAIS-AAVQPDLIVYVMDASIGQACEAQAKAFKSKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +++ ELL+KL G FTLR MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLEENGELLEKLKHGEFTLRDMYEQLTNIMKMGPFNQILNMIPGFGAELSKNTSEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S AK+KR MT+MDSM + ELDS KL + SR +R+ARG+G ++ EV E++ +Y +
Sbjct: 361 SMAKLKRMMTIMDSMADSELDSREGAKLFSKQPSRAVRVARGAGVRLIEVQELISQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 459
A + KM G+K + + G+ +++N+N M+K+
Sbjct: 421 AAVVKKMGGIKGLFRAGD---ITKNVNPTQMAKL 451
>gi|386697563|gb|AFJ22242.1| signal recognition particle protein 54k, partial [Xolalgoides sp.
AD649]
Length = 453
Score = 553 bits (1426), Expect = e-155, Method: Compositional matrix adjust.
Identities = 269/454 (59%), Positives = 351/454 (77%), Gaps = 9/454 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV KLV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICAALIESDVNIKLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVQAWQPIKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LVI+VMD+SIGQA QA+AFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVIYVMDASIGQACEAQARAFKNKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAAT+SP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK+
Sbjct: 242 KLDGHAKGGGALSAVAATQSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVS 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF EL E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGQELAKNASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL + +RI+R+ARG G REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVARGCGVTQREVQELLTQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 459
A + KM G+K + + G+ LS+N+N M+K+
Sbjct: 421 AAVVKKMGGIKGLFRSGD---LSKNVNPAQMAKL 451
>gi|386697327|gb|AFJ22124.1| signal recognition particle protein 54k, partial [Capitolichus sp.
AD1240]
Length = 464
Score = 553 bits (1426), Expect = e-155, Method: Compositional matrix adjust.
Identities = 272/463 (58%), Positives = 357/463 (77%), Gaps = 10/463 (2%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITSALRSLGNATIINQEVLDSLLKEICTALIESDVNIILVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKR++I A+F L K+LDPG P + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRKMIMTAVFRNLVKLLDPGVPVWQPIKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LV++VMD+SIGQA QA+AFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVVYVMDASIGQACESQARAFKNKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F+V+PF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFEVEPFISKLLGMGDIKGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL + +RI+R+ARGSG REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVARGSGVTQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
A + KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 421 AAVVKKMGGIKGLFKSGD---LAKNVNPAQMAK-LNQQMAKMI 459
>gi|195441672|ref|XP_002068627.1| GK20323 [Drosophila willistoni]
gi|194164712|gb|EDW79613.1| GK20323 [Drosophila willistoni]
Length = 508
Score = 553 bits (1426), Expect = e-155, Method: Compositional matrix adjust.
Identities = 282/490 (57%), Positives = 377/490 (76%), Gaps = 16/490 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A+ +S AT+I+E+ LN L EI ALL+ADV +LV++++ N++ ++
Sbjct: 1 MVLADLGRKITTALHSLSKATVINEEALNAMLKEICAALLEADVNIRLVKQLRENVRAVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ D++A G NKRR+IQ A+F EL K++DPG + P KGK +VIMFVGLQGSGKTTTCTK
Sbjct: 61 DFDEMAGGLNKRRMIQSAVFKELIKLVDPGVKPYQPVKGKANVIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++QK+ WK LVCADTFRAGA+DQ+KQNATKA+IPFYGSYTE DPV IA EGV+ FK
Sbjct: 121 LAYHYQKRNWKSCLVCADTFRAGAYDQIKQNATKARIPFYGSYTEIDPVVIAQEGVDMFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
+E ++IIVDTSGRHKQE +LFEEM V+ A V+PD +IFVMD++IGQA QA+AFK
Sbjct: 181 REGFEMIIVDTSGRHKQEESLFEEMLAVANA-VSPDNIIFVMDATIGQACEAQAKAFKDK 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V +G+VI+TK+DGHAKGGGALSAVAAT+SP+IFIGTGEH+D+ E F KPFVS+LLGMGD
Sbjct: 240 VDIGSVIITKLDGHAKGGGALSAVAATQSPIIFIGTGEHIDDLEPFKTKPFVSKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G +DK++E + +D ELL+K+ G+FT+R MYEQFQNI+KMGP Q+ +M+PGFS +
Sbjct: 300 IEGLIDKVNE-LKLDGNEELLEKIKHGHFTIRDMYEQFQNIMKMGPFSQIMNMIPGFSQD 358
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQVREVM 417
M KG E+ES A++KR MTMMDSM++ ELD+ + KL + +R +R+A+GSG REV
Sbjct: 359 FMTKGCEQESMARMKRMMTMMDSMSDSELDNRDGAKLFSKQPTRCVRVAQGSGVIEREVK 418
Query: 418 EMLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNA-------QHMSKVLPQGMLKQIG 469
E++ Y + A + KM G+K + K+G+M ++N+N Q M+K++ ML+Q+G
Sbjct: 419 ELIAHYTKFAAVVKKMGGVKGLFKQGDM---TKNVNPTQMAKLNQQMAKMIDPRMLQQMG 475
Query: 470 GVGGLQNLMK 479
GVGGLQN+M+
Sbjct: 476 GVGGLQNMMR 485
>gi|386697307|gb|AFJ22114.1| signal recognition particle protein 54k, partial [Aniibius
drepanophorus]
Length = 464
Score = 553 bits (1425), Expect = e-155, Method: Compositional matrix adjust.
Identities = 271/463 (58%), Positives = 358/463 (77%), Gaps = 10/463 (2%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV KLV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDNLLKEICMALIESDVNIKLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKR++I A+F EL ++LDPG ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRKMIMTAVFKELVRLLDPGVKAWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFSKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LV++VMD+SIGQA QAQAFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVVYVMDASIGQACEAQAQAFKDKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVRPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF ++L E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGADLAKCTSEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL + +R++R+ARGSG REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRVVRVARGSGVTQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
A + KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 421 AAVVKKMGGIKGLFKTGD---LAKNVNPAQMAK-LNQQMAKMI 459
>gi|386697177|gb|AFJ22049.1| signal recognition particle protein 54k, partial [Canestrinia sp.
n. AD775]
Length = 464
Score = 553 bits (1425), Expect = e-155, Method: Compositional matrix adjust.
Identities = 271/463 (58%), Positives = 358/463 (77%), Gaps = 10/463 (2%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ AI+ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ +++AAG
Sbjct: 3 ITTAIRSLGNATIINQEVLDNMLKEICAALIESDVNIVLVKKLRENVRSVIDFEEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ +KG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKAWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEVVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM +S A + P+L+++VMD+SIGQA +QA+AFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAIS-AAIQPNLIVYVMDASIGQACENQAKAFKSKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE+F VKPF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFELFKVKPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FTLR MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTLRDMYEQLTNIMKMGPFNQILNMIPGFGAELSKCTSEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL + +RIMR++RG+G REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIMRVSRGAGVTQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
A + KM G+K + K G+ L++N+N M+K L Q M + I
Sbjct: 421 AAVVKKMGGIKGLFKSGD---LTKNVNPAQMAK-LNQQMARMI 459
>gi|386697081|gb|AFJ22001.1| signal recognition particle protein 54k, partial [Hypochthonius
luteus]
Length = 464
Score = 553 bits (1425), Expect = e-155, Method: Compositional matrix adjust.
Identities = 274/461 (59%), Positives = 355/461 (77%), Gaps = 10/461 (2%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL++ADV KLV+ ++ N++ +++ +++AAG
Sbjct: 3 ITTALRSLGNATIINKEVLDSLLKEICTALIEADVNIKLVKGLRENVRSVIDFEEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+IQ A+F EL K++DPG ++TP KG+ +VIMFVGLQGSGKTTTCTK AYY+ +KG
Sbjct: 63 NKRRMIQMAVFKELVKLVDPGVKAWTPVKGRTNVIMFVGLQGSGKTTTCTKMAYYYVRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK +LVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F E ++IIV
Sbjct: 123 WKCSLVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIAAEGVEKFTNEGFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM +S T P+L+I+VMD+SIGQ+ QA+AFK V VGAVIVT
Sbjct: 183 DTSGRHKQESSLFEEMLAISN-TTQPNLIIYVMDASIGQSCEAQARAFKGKVDVGAVIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAAT+SP+IFIGTGEH+D+FE F VKPFVS+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATQSPIIFIGTGEHIDDFEQFKVKPFVSKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FTLR MYEQF NI+KMGP Q+ +M+PGF ++LM E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTLRDMYEQFTNIMKMGPFSQILNMIPGFGADLMRGASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMNDS--RIMRIARGSGRQVREVMEMLEEYKRL 426
S A++KR MT+MDSM++ ELDS KL RI R+ARGSG REV E+L +Y +
Sbjct: 361 SMARLKRLMTIMDSMSDSELDSREGAKLFTKQPLRIQRVARGSGVTQREVQELLTQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLK 466
A + +M G+K + K G+M ++N+N M+K L Q M K
Sbjct: 421 AAVVKRMGGIKGLFKGGDM---AKNVNQAQMAK-LNQQMAK 457
>gi|386697333|gb|AFJ22127.1| signal recognition particle protein 54k, partial [Piciformobia sp.
AD1182]
Length = 464
Score = 553 bits (1425), Expect = e-155, Method: Compositional matrix adjust.
Identities = 272/463 (58%), Positives = 357/463 (77%), Gaps = 10/463 (2%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITSALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKR++I A+F L K+LDPG P + P KGKP+VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRKMIMTAVFRNLVKLLDPGVPVWQPVKGKPNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
+K ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KE D+IIV
Sbjct: 123 YKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKEGFDIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LV++VMD+SIGQA QA+AFK+ V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVVYVMDASIGQACESQARAFKEKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F+V+PF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFEVEPFISKLLGMGDIKGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
+ +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 -ALKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL + +RI+R+ARGSG REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVARGSGVTQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
A + KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 421 AAVVKKMGGIKGLFKSGD---LTKNVNPAQMAK-LNQQMAKMI 459
>gi|386697543|gb|AFJ22232.1| signal recognition particle protein 54k, partial [Trouessartia
kratochvili]
gi|386697545|gb|AFJ22233.1| signal recognition particle protein 54k, partial [Trouessartia
reguli]
Length = 464
Score = 553 bits (1425), Expect = e-155, Method: Compositional matrix adjust.
Identities = 272/463 (58%), Positives = 357/463 (77%), Gaps = 10/463 (2%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG ++ P KG+ +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKAWQPVKGRTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LVI+VMD+SIGQA QA+AFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVIYVMDASIGQACEAQARAFKNKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL + +RI+R++RGSG REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVSRGSGVTQREVQELLNQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
A + KM G+K + K G+ L++N+N M++ L Q M K I
Sbjct: 421 AAVVKKMGGIKGLFKSGD---LAKNVNPAQMAR-LNQQMAKMI 459
>gi|386697173|gb|AFJ22047.1| signal recognition particle protein 54k, partial [Afrocanestrinia
sp. n. AD456]
Length = 464
Score = 553 bits (1425), Expect = e-155, Method: Compositional matrix adjust.
Identities = 272/463 (58%), Positives = 357/463 (77%), Gaps = 10/463 (2%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ AI+ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ +++AAG
Sbjct: 3 ITTAIRSLGNATIINQEVLDNMLKEICAALIESDVNIMLVKQLRENVRSVIDFEEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ +KG
Sbjct: 63 NKRRMIMMAVFQELVKLLDPGVKAWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEVVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM +S A V P+L+++VMD+SIGQA QA+AFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAIS-AAVQPNLIVYVMDASIGQACEAQARAFKSKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE+F VKPF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFELFKVKPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FTLR MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTLRDMYEQLTNIMKMGPFNQILNMIPGFGAELSKCTSEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL + +RIMR++RG+G REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDSREGSKLFSKQPTRIMRVSRGAGVTQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
A + KM G+K + K G+ L++N+N M+K L Q M + I
Sbjct: 421 AAVVKKMGGIKGLFKSGD---LTKNVNPAQMAK-LNQQMARMI 459
>gi|386697441|gb|AFJ22181.1| signal recognition particle protein 54k, partial [Heteropsorus sp.
AD869]
Length = 464
Score = 553 bits (1425), Expect = e-155, Method: Compositional matrix adjust.
Identities = 273/463 (58%), Positives = 357/463 (77%), Gaps = 10/463 (2%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKAWQPIKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVIIASEGVEKFTKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LVI+VMD+SIGQA QA+AFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVIYVMDASIGQACEAQARAFKNKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLDDNEELMEKLKHGEFTIRDMYEQLTNIMKMGPFNQLLNMIPGFGAELAKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL + +RI+R++RG+G REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDTELDSREGAKLFSKQPTRIVRVSRGAGVTQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
A + KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 421 AAVVKKMGGIKGLFKSGD---LAKNVNPAQMAK-LNQQMAKMI 459
>gi|386697165|gb|AFJ22043.1| signal recognition particle protein 54k, partial [Achaetodactylus
leleupi]
Length = 464
Score = 553 bits (1425), Expect = e-155, Method: Compositional matrix adjust.
Identities = 273/463 (58%), Positives = 356/463 (76%), Gaps = 10/463 (2%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI +AL+++DV LV++++ N++ +++ +++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICKALIESDVNIMLVKQLRENVRSVIDFEEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL ++LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ +KG
Sbjct: 63 NKRRMIMMAVFKELVRLLDPGVKPWQPIKGKTNVIMFVGLQGIGKTTTCTKMAYYYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE +LFEEM +S A V P+L+++VMD+SIGQA QA+AFK V VGA+IVT
Sbjct: 183 DTSGRHKQENSLFEEMLAIS-AAVQPNLIVYVMDASIGQACEAQARAFKNKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FTLR MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTLRDMYEQLTNIMKMGPFNQILNMIPGFGAELSKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL + +RI+R+ARGSG REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIIRVARGSGVTQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
A + KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 421 AAVVKKMGGIKGLFKSGD---LAKNVNPAQMAK-LNQQMAKMI 459
>gi|386697443|gb|AFJ22182.1| signal recognition particle protein 54k, partial [Heteropsorus sp.
AD840]
Length = 464
Score = 553 bits (1425), Expect = e-155, Method: Compositional matrix adjust.
Identities = 273/463 (58%), Positives = 357/463 (77%), Gaps = 10/463 (2%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG S+ P KGK +VIMFVGLQG GKTTTCTK AYY+ +KG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKSWQPIKGKTNVIMFVGLQGIGKTTTCTKMAYYYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVIIASEGVEKFTKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LVI+VMD+SIGQA QA+AFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVIYVMDASIGQACEAQARAFKNKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLDDNEELMEKLKHGEFTIRDMYEQLTNIMKMGPFNQLLNMIPGFGAELAKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL + +RI+R++RG+G REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDTELDSREGAKLFSKQPTRIVRVSRGAGVTQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
A + KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 421 AAVVKKMGGIKGLFKSGD---LAKNVNPAQMAK-LNQQMAKMI 459
>gi|386697509|gb|AFJ22215.1| signal recognition particle protein 54k, partial [Onychalges sp. 2
PBK-2011]
Length = 464
Score = 553 bits (1425), Expect = e-155, Method: Compositional matrix adjust.
Identities = 271/463 (58%), Positives = 358/463 (77%), Gaps = 10/463 (2%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++++++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDGLLKEICTALIESDVNIMLVKQLRENVRRVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I +A+F ELCK+LDP ++ P KG+ +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMRAVFQELCKLLDPEVKAWQPVKGRTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFSNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LVI+VMD+SIGQA QA+AFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVIYVMDASIGQACEAQARAFKSKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVRPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL + +RI+R+ARG+G REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVARGAGVTQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
A + KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 421 AAVVKKMGGIKGLFKSGD---LTKNVNPAQMAK-LNQQMAKMI 459
>gi|386697343|gb|AFJ22132.1| signal recognition particle protein 54k, partial [Fringillosphaera
sp. AD781]
Length = 464
Score = 553 bits (1425), Expect = e-155, Method: Compositional matrix adjust.
Identities = 273/463 (58%), Positives = 355/463 (76%), Gaps = 10/463 (2%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFKELIKLLDPGVKVWQPAKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LVI+VMD+SIGQA QA+AFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVIYVMDASIGQACEAQARAFKNKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLM--NDSRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL +RI+R++RG+G REV E+L +Y +
Sbjct: 361 SMSRLKRIMTIMDSMSDSELDSREGAKLFCKQPTRIVRVSRGAGVTQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
A + KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 421 AAVVKKMGGIKGLFKSGD---LAKNVNPAQMAK-LNQQMAKMI 459
>gi|386697539|gb|AFJ22230.1| signal recognition particle protein 54k, partial [Trouessartia
rubecula]
Length = 464
Score = 553 bits (1425), Expect = e-155, Method: Compositional matrix adjust.
Identities = 272/463 (58%), Positives = 357/463 (77%), Gaps = 10/463 (2%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG ++ P KG+ +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKAWQPVKGRTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LVI+VMD+SIGQA QA+AFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVIYVMDASIGQACEAQARAFKNKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL + +RI+R++RGSG REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVSRGSGVTQREVQELLNQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
A + KM G+K + K G+ L++N+N M++ L Q M K I
Sbjct: 421 AAVVKKMGGIKGLFKSGD---LAKNVNPVQMAR-LNQQMAKMI 459
>gi|386697691|gb|AFJ22306.1| signal recognition particle protein 54k, partial [Schizocarpus sp.
F nr. subvirgulatus AD1262]
Length = 464
Score = 553 bits (1425), Expect = e-155, Method: Compositional matrix adjust.
Identities = 274/463 (59%), Positives = 355/463 (76%), Gaps = 10/463 (2%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG + P KGKP+VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKVWQPIKGKPNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFAKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE+ LFEEM + +A + P+LVI+VMD+SIGQA QA+AFK V VGA+IVT
Sbjct: 183 DTSGRHKQESXLFEEMLAI-QAAIQPNLVIYVMDASIGQACEAQAKAFKSKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL + +RI+R+ARGSG EV ++L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVARGSGVTQNEVQKLLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
A + KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 421 AAVVKKMGGIKGLFKSGD---LAKNVNPAQMAK-LNQQMAKMI 459
>gi|386697535|gb|AFJ22228.1| signal recognition particle protein 54k, partial [Steatacarus
bifiditibia]
Length = 464
Score = 553 bits (1424), Expect = e-154, Method: Compositional matrix adjust.
Identities = 273/463 (58%), Positives = 356/463 (76%), Gaps = 10/463 (2%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKKLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG + P+KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFQELVKLLDPGVKVWQPQKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LVI+VMD+SIGQA QA+AFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVIYVMDASIGQACEGQARAFKNKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL + +R++R+ARGSG REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRMVRVARGSGVTQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
A + KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 421 AAVVKKMGGIKGLFKSGD---LAKNVNPTQMAK-LNQQMAKMI 459
>gi|125980516|ref|XP_001354282.1| GA18336 [Drosophila pseudoobscura pseudoobscura]
gi|195167799|ref|XP_002024720.1| GL22620 [Drosophila persimilis]
gi|54642588|gb|EAL31335.1| GA18336 [Drosophila pseudoobscura pseudoobscura]
gi|194108125|gb|EDW30168.1| GL22620 [Drosophila persimilis]
Length = 508
Score = 553 bits (1424), Expect = e-154, Method: Compositional matrix adjust.
Identities = 281/490 (57%), Positives = 373/490 (76%), Gaps = 16/490 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A+ +S AT+I+E+ LN L EI ALL+ADV +LV++++ N++ ++
Sbjct: 1 MVLADLGRKITTALHSLSKATVINEEALNSMLKEICAALLEADVNIRLVKQLRENVRAVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ D++A G NKRR+IQ A+F EL K++DPG + P KGK ++IMFVGLQGSGKTTTCTK
Sbjct: 61 DFDEMAGGLNKRRMIQSAVFKELIKLVDPGVKPYQPIKGKANIIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++QK+ WK LVCADTFRAGA+DQ+KQNATKA+IPFYGSYTE DPV IA EGV+ FK
Sbjct: 121 LAYHYQKRNWKSCLVCADTFRAGAYDQIKQNATKARIPFYGSYTEIDPVVIAQEGVDMFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
+E ++IIVDTSGRHKQE +LFEEM V+ A VNPD +IFVMD++IGQA QA+AFK
Sbjct: 181 REGFEMIIVDTSGRHKQEESLFEEMLAVANA-VNPDNIIFVMDATIGQACEAQAKAFKDK 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V +G+VI+TK+DGHAKGGGALSAVAAT+SP+IFIGTGEH+D+ E F KPFVS+LLGMGD
Sbjct: 240 VDIGSVIITKLDGHAKGGGALSAVAATQSPIIFIGTGEHIDDLEPFKTKPFVSKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G +DK++E + +D ELL+K+ G+FT+R MYEQFQNI+KMGP Q+ +M+PGFS +
Sbjct: 300 IEGLIDKVNE-LKLDGNEELLEKIKHGHFTIRDMYEQFQNIMKMGPFSQIMNMIPGFSQD 358
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLM--NDSRIMRIARGSGRQVREVM 417
M KG E ES A+IKR MTMMDSM++ ELD+ + KL +R R+A+G+G RE
Sbjct: 359 FMTKGGEAESMARIKRMMTMMDSMSDNELDNRDGAKLFIKQPTRCTRVAQGAGVLEREAK 418
Query: 418 EMLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNA-------QHMSKVLPQGMLKQIG 469
E++ Y + A + KM G+K + K+G+M ++N+N Q M+K++ ML+Q+G
Sbjct: 419 ELIAHYTKFAAVVKKMGGVKGLFKQGDM---TKNVNPTQMAKLNQQMAKMIDPRMLQQMG 475
Query: 470 GVGGLQNLMK 479
GVGGLQN+M+
Sbjct: 476 GVGGLQNMMR 485
>gi|386697681|gb|AFJ22301.1| signal recognition particle protein 54k, partial [Listrophorus
validus]
Length = 453
Score = 553 bits (1424), Expect = e-154, Method: Compositional matrix adjust.
Identities = 268/454 (59%), Positives = 352/454 (77%), Gaps = 9/454 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV KLV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLREICTALIESDVNIKLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I ++F EL K+LDPG S+ P KG+ +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMSVFKELVKLLDPGVKSWQPVKGRTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
W+ ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WRCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFSNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LVI+VMD+SIGQA QA+AFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVIYVMDASIGQACEAQAKAFKDKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF EL E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGPELAKCASETE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL + +RI+R+ARGSG REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVARGSGVTQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 459
A + KM G+K + K G+ L++N+N M+K+
Sbjct: 421 AAVVKKMGGIKGLFKSGD---LTKNVNPAQMAKL 451
>gi|386697345|gb|AFJ22133.1| signal recognition particle protein 54k, partial [Apionacaridae
gen. sp. AD1423]
Length = 464
Score = 552 bits (1423), Expect = e-154, Method: Compositional matrix adjust.
Identities = 273/463 (58%), Positives = 355/463 (76%), Gaps = 10/463 (2%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFKELIKLLDPGVKVWQPAKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LVI+VMD+SIGQA QA+AFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVIYVMDASIGQACEAQARAFKNKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLM--NDSRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL +RI+R++RG+G REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDSREGAKLFCKQPTRIVRVSRGAGVTQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
A + KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 421 AAVVKKMGGIKGLFKSGD---LAKNVNPAQMAK-LNQQMAKMI 459
>gi|386697631|gb|AFJ22276.1| signal recognition particle protein 54k, partial [Montesauria sp.
n. AD617]
Length = 453
Score = 552 bits (1423), Expect = e-154, Method: Compositional matrix adjust.
Identities = 270/454 (59%), Positives = 351/454 (77%), Gaps = 9/454 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LVI+VMD+SIGQA QA+AFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVIYVMDASIGQACEAQAKAFKNKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM + ELDS KL + +RI+R+ARG+G REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMADSELDSREGAKLFSKQPTRIVRVARGAGVTQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 459
A + KM G+K + K G+ +S+N+N+ M K+
Sbjct: 421 AAVVKKMGGIKGLFKTGD---ISKNVNSAQMLKL 451
>gi|386697693|gb|AFJ22307.1| signal recognition particle protein 54k, partial [Schizocarpus sp.
E nr. subvirgulatus AD1267]
Length = 464
Score = 552 bits (1423), Expect = e-154, Method: Compositional matrix adjust.
Identities = 273/463 (58%), Positives = 356/463 (76%), Gaps = 10/463 (2%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ +++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFEEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG + P KGKP+VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKVWQPIKGKPNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFAKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LVI+VMD+SIGQA QA+AFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVIYVMDASIGQACEAQAKAFKSKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL + +RI+R+ARGSG EV ++L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVARGSGVTQNEVQKLLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
A + KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 421 AAVVKKMGGIKGLFKSGD---LTKNVNPAQMAK-LNQQMAKMI 459
>gi|386697679|gb|AFJ22300.1| signal recognition particle protein 54k, partial [Metalistrophorus
pagenstecheri]
Length = 464
Score = 552 bits (1423), Expect = e-154, Method: Compositional matrix adjust.
Identities = 273/463 (58%), Positives = 356/463 (76%), Gaps = 10/463 (2%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV KLV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLREICTALIESDVNIKLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I ++F EL K+LDPG ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMSVFKELVKLLDPGVKAWQPIKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
W+ ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN ++IIV
Sbjct: 123 WRCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LVI+VMD+SIGQA QA+AFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVIYVMDASIGQACEAQAKAFKDKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF EL E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGPELAKCASETE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL + +RI+R++RGSG REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIIRVSRGSGVTQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
A + KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 421 AAVVKKMGGIKGLFKSGD---LTKNVNPAQMAK-LNQQMAKVI 459
>gi|386697169|gb|AFJ22045.1| signal recognition particle protein 54k, partial [Chaetodactylus
krombeini]
Length = 453
Score = 552 bits (1423), Expect = e-154, Method: Compositional matrix adjust.
Identities = 268/454 (59%), Positives = 352/454 (77%), Gaps = 9/454 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII++ VL+ L EI +AL+++DV LV++++ N++ +++ +++AAG
Sbjct: 3 ITTALRSLGNATIINQDVLDSLLKEICKALIESDVNIMLVKQLRENVRSVIDFEEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL ++LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ +KG
Sbjct: 63 NKRRMIMMAVFKELVRLLDPGVKPWQPIKGKTNVIMFVGLQGIGKTTTCTKMAYYYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE +LFEEM +S A V P+L+++VMD+SIGQA QA+AFK V VGA+IVT
Sbjct: 183 DTSGRHKQENSLFEEMLAIS-AAVQPNLIVYVMDASIGQACEAQAKAFKSKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE+F VKPF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFELFKVKPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FTLR MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTLRDMYEQLTNIMKMGPFNQILNMIPGFGAELSKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL + +RI+R+ARGSG REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIIRVARGSGVTQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 459
A + KM G+K + K G+ L++N+N M+K+
Sbjct: 421 AAVVKKMGGIKGLFKSGD---LAKNVNPAQMAKL 451
>gi|386697175|gb|AFJ22048.1| signal recognition particle protein 54k, partial [Canestrinia
pentodontis]
Length = 453
Score = 552 bits (1423), Expect = e-154, Method: Compositional matrix adjust.
Identities = 267/454 (58%), Positives = 353/454 (77%), Gaps = 9/454 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ AI+ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ +++AAG
Sbjct: 3 ITTAIRSLGNATIINQEVLDNMLKEICAALIESDVNIVLVKQLRENVRSVIDFEEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ +KG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKAWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEVVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM +S A + P+L+++VMD+SIGQA QA+AFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAIS-AAIQPNLIVYVMDASIGQACEAQARAFKSKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE+F VKPF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFELFKVKPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FTLR MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTLRDMYEQLTNIMKMGPFNQILNMIPGFGAELSKCTSEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL + +RIMR++RG+G REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIMRVSRGAGVTQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 459
A + KM G+K + K G+ L++N+N M+K+
Sbjct: 421 AAVVKKMGGIKGLFKSGD---LTKNVNPAQMAKL 451
>gi|195127379|ref|XP_002008146.1| GI13333 [Drosophila mojavensis]
gi|193919755|gb|EDW18622.1| GI13333 [Drosophila mojavensis]
Length = 508
Score = 552 bits (1423), Expect = e-154, Method: Compositional matrix adjust.
Identities = 282/490 (57%), Positives = 375/490 (76%), Gaps = 16/490 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A+ +S AT+I+E+ L+ L EI ALL+ADV + V++++ N++ ++
Sbjct: 1 MVLADLGRKITTALHSLSKATVINEEALSAMLKEICAALLEADVNIRQVKQLRENVRAVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ D++A G NKRR+IQ A+F EL K++DPG + P KGK +VIMFVGLQGSGKTTTCTK
Sbjct: 61 DFDEMAGGLNKRRMIQSAVFKELIKLVDPGVKPYQPVKGKANVIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++QK+ WK LVCADTFRAGA+DQ+KQNATKA+IPFYGSYTE DPV IA EGV+ FK
Sbjct: 121 LAYHYQKRNWKSCLVCADTFRAGAYDQIKQNATKARIPFYGSYTEIDPVVIAQEGVDMFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
+E ++IIVDTSGRHKQE +LFEEM V+ A VNPD +IFVMD++IGQA QA+AFK+
Sbjct: 181 REGFEMIIVDTSGRHKQEESLFEEMLAVANA-VNPDNIIFVMDATIGQACEAQAKAFKEK 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V +G+VI+TK+DGHAKGGGALSAVAAT+SP+IFIGTGEH+D+ E F KPFVS+LLGMGD
Sbjct: 240 VDIGSVIITKLDGHAKGGGALSAVAATQSPIIFIGTGEHIDDLEPFKTKPFVSKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G +DK++E + +D ELL+K+ G+FT+R MYEQFQNILKMGP Q+ +M+PGFS +
Sbjct: 300 IEGLIDKVNE-LKLDGNEELLEKIKHGHFTIRDMYEQFQNILKMGPFSQIMNMIPGFSQD 358
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQVREVM 417
M KG E+ES A+IKR MTMMDSM++ ELD+ + KL + +R R+A G+G REV
Sbjct: 359 FMTKGGEQESMARIKRMMTMMDSMSDSELDNRDGAKLFSKQPTRCTRVAHGAGVIEREVK 418
Query: 418 EMLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNA-------QHMSKVLPQGMLKQIG 469
E++ Y + A + KM G+K + K+G+M ++N+N Q M+K++ ML+Q+G
Sbjct: 419 ELIAHYTKFAAVVKKMGGVKGLFKQGDM---TKNVNPTQMAKLNQQMAKMIDPRMLQQMG 475
Query: 470 GVGGLQNLMK 479
GVGGLQN+M+
Sbjct: 476 GVGGLQNMMR 485
>gi|386697421|gb|AFJ22171.1| signal recognition particle protein 54k, partial [Diplaegidia sp. A
PBK-2011]
Length = 464
Score = 552 bits (1423), Expect = e-154, Method: Compositional matrix adjust.
Identities = 269/454 (59%), Positives = 352/454 (77%), Gaps = 9/454 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+E L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDELLKEICAALIESDVNIMLVKKLRDNVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFQELVKLLDPGVKVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENXEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LVI+VMD+SIGQA QA+AFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVIYVMDASIGQACEAQARAFKNKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL+ KL G FT+R MYEQ NI+KMGP Q+ +M+PGF ++L E E
Sbjct: 302 E-LKLDDNEELIAKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGADLAKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL + +RI+R+ARGSG REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVARGSGVTQREVHELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 459
+ + KM G+K + K G+ L++N+N M+K+
Sbjct: 421 SGVVKKMGGIKGLXKSGD---LAKNVNPAQMAKL 451
>gi|386697499|gb|AFJ22210.1| signal recognition particle protein 54k, partial [Sturnophagoides
bakeri]
Length = 453
Score = 552 bits (1423), Expect = e-154, Method: Compositional matrix adjust.
Identities = 267/454 (58%), Positives = 354/454 (77%), Gaps = 9/454 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++++++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDGLLKEICTALIESDVNIMLVKQLRENVRRVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I +A+F ELCK+LDP ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMRAVFQELCKLLDPEVKAWQPMKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LVI+VMD+SIGQA QA+AFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVIYVMDASIGQACEAQARAFKSKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVRPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL + +RI+R+ARG+G REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVARGAGVTQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 459
A + KM G+K + K G+ L++N+N M+K+
Sbjct: 421 AAVVKKMGGIKGLFKSGD---LAKNVNPAQMAKL 451
>gi|386697157|gb|AFJ22039.1| signal recognition particle protein 54k, partial [Hyadesia aff.
curassaviensis AD605]
Length = 453
Score = 552 bits (1423), Expect = e-154, Method: Compositional matrix adjust.
Identities = 267/454 (58%), Positives = 352/454 (77%), Gaps = 9/454 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKKLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKAWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM +S A + P+L+++VMD+SIGQA QA+AFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAIS-AAIQPNLIVYVMDASIGQACESQAKAFKSKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE+F VKPF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFELFKVKPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FTLR MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTLRDMYEQLTNIMKMGPFNQILNMIPGFGAELSKCTSEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL + +RI R+A+G+G REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIARVAKGAGVTQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 459
A + KM G+K + K G+ L++N+N M+K+
Sbjct: 421 AAVVKKMGGIKGLFKSGD---LTKNVNPNQMAKL 451
>gi|386697329|gb|AFJ22125.1| signal recognition particle protein 54k, partial [Capitolichus sp.
C PBK-2011]
gi|386697331|gb|AFJ22126.1| signal recognition particle protein 54k, partial [Capitolichus sp.
A PBK-2011]
Length = 464
Score = 552 bits (1422), Expect = e-154, Method: Compositional matrix adjust.
Identities = 271/463 (58%), Positives = 357/463 (77%), Gaps = 10/463 (2%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITSALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKR++I A+F L K+LDPG P + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRKMIMTAVFRNLVKLLDPGVPIWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LV++VMD+SIGQA QA+AFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVVYVMDASIGQACESQARAFKNKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F+V+PF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFEVEPFISKLLGMGDIKGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL + +R++R+ARGSG REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRMVRVARGSGVTQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
A + KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 421 AAVVKKMGGIKGLFKSGD---LAKNVNPAQMAK-LNQQMAKMI 459
>gi|386697553|gb|AFJ22237.1| signal recognition particle protein 54k, partial [Trouessartia sp.
n. AD616]
Length = 453
Score = 552 bits (1422), Expect = e-154, Method: Compositional matrix adjust.
Identities = 268/454 (59%), Positives = 353/454 (77%), Gaps = 9/454 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG ++ P KG+ +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKAWQPVKGRTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LVI+VMD+SIGQA QA+AFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVIYVMDASIGQACEAQARAFKNKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL + +RI+R++RGSG REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVSRGSGVTQREVQELLNQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 459
A + KM G+K + K G+ L++N+N M+K+
Sbjct: 421 AAVVKKMGGIKGLFKSGD---LAKNVNPAQMAKL 451
>gi|386697493|gb|AFJ22207.1| signal recognition particle protein 54k, partial [Gymnoglyphus osu]
Length = 460
Score = 552 bits (1422), Expect = e-154, Method: Compositional matrix adjust.
Identities = 272/460 (59%), Positives = 355/460 (77%), Gaps = 10/460 (2%)
Query: 13 AIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKR 72
A++ + NATII+++VL+ L EI AL+++DV LV++++ N++++++ D++AAG NKR
Sbjct: 2 ALRSLGNATIINQEVLDGLLKEICTALIESDVNIMLVKQLRENVRRVIDFDEMAAGLNKR 61
Query: 73 RIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKP 132
R+I +A+F ELCK+LDP + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKGWK
Sbjct: 62 RMIMRAVFQELCKLLDPEVKVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKGWKC 121
Query: 133 ALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTS 192
ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IVDTS
Sbjct: 122 ALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFSNENFEIVIVDTS 181
Query: 193 GRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMD 252
GRHKQE++LFEEM + +A + P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK+D
Sbjct: 182 GRHKQESSLFEEMLAI-QAAIQPNLVIYVMDASIGQACESQARAFKSKVDVGAIIVTKLD 240
Query: 253 GHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVV 312
GHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK++E +
Sbjct: 241 GHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVRPFISKLLGMGDIEGLIDKVNE-L 299
Query: 313 PMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQA 372
+D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES +
Sbjct: 300 KLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAESMS 359
Query: 373 KIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKI 429
++KR MT+MDSM++ ELDS KL + +RI+R+ARGSG REV E+L +Y + A +
Sbjct: 360 RLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVARGSGVTQREVQELLSQYTKFAAV 419
Query: 430 WSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 420 VKKMGGIKGLFKSGD---LTKNVNPAQMAK-LNQQMAKMI 455
>gi|386697091|gb|AFJ22006.1| signal recognition particle protein 54k, partial [Gehypochthonius
sp. AD1358]
Length = 464
Score = 552 bits (1422), Expect = e-154, Method: Compositional matrix adjust.
Identities = 271/461 (58%), Positives = 359/461 (77%), Gaps = 10/461 (2%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L +I ALL+ADV KLV++++ N++ +++ +++AAG
Sbjct: 3 ITTALRSLGNATIINKEVLDGLLKDICTALLEADVNIKLVKQLRENVRSVIDFEEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+IQ A+F EL K++DPG ++ P KG+ +++MFVGLQGSGKTTTCTK AYY+ +KG
Sbjct: 63 NKRRMIQMAVFKELVKLVDPGVKAWQPIKGRTNIVMFVGLQGSGKTTTCTKMAYYYVRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGV+ F EN ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIAAEGVDKFTNENFEVIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM +S +V P+L+I+VMD+SIGQA QA+AFK V VGAVIVT
Sbjct: 183 DTSGRHKQESSLFEEMLAISN-SVQPNLIIYVMDASIGQACEPQARAFKSKVDVGAVIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHA+GGGALSAVAAT+SP+IFIGTGEH+D+FE F VKPFVS+LLGMGD G +DK++
Sbjct: 242 KLDGHARGGGALSAVAATQSPIIFIGTGEHIDDFEQFKVKPFVSKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D+ EL++KL G FTLR MYEQF NI+KMGP Q+ +M+PGF ++LM E E
Sbjct: 302 E-LKLDENEELIEKLKHGEFTLRDMYEQFTNIMKMGPFNQILNMIPGFGADLMKGASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL + +RI R+ARG+G REV E+L +Y +
Sbjct: 361 SMSRLKRLMTIMDSMSDSELDSREGAKLFSKQPTRIARVARGAGVTFREVQELLTQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLK 466
A + KM G+K + K G+M ++N+N M K L Q M K
Sbjct: 421 AAVVKKMGGIKGLFKGGDM---AKNVNPAQMMK-LNQQMAK 457
>gi|386697613|gb|AFJ22267.1| signal recognition particle protein 54k, partial [Platyacarus sp.
AD1238]
Length = 464
Score = 552 bits (1422), Expect = e-154, Method: Compositional matrix adjust.
Identities = 269/454 (59%), Positives = 352/454 (77%), Gaps = 9/454 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LVI+VMD+SIGQA QA+AFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVIYVMDASIGQACEAQAKAFKNKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL + +R++R++RGSG REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRLIRVSRGSGVTQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 459
A + KM G+K + K G+ L++N+N+ M K+
Sbjct: 421 AAVVKKMGGIKGLFKTGD---LAKNVNSAQMLKL 451
>gi|386697103|gb|AFJ22012.1| signal recognition particle protein 54k, partial [Anachipteria sp.
AD1103]
Length = 460
Score = 552 bits (1422), Expect = e-154, Method: Compositional matrix adjust.
Identities = 271/458 (59%), Positives = 357/458 (77%), Gaps = 10/458 (2%)
Query: 13 AIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKR 72
A++ + NATII+++VL+ L +I ALL+ADV KLV+E++ N++ +++ +++AAG NKR
Sbjct: 2 ALRSLGNATIINKEVLDGLLKDICTALLEADVNIKLVKELRENVRSVIDFEEMAAGLNKR 61
Query: 73 RIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKP 132
R+IQ A+F EL K++DPG ++TP KG+ +++MFVGLQGSGKTTTCTK AYY+ +KGWK
Sbjct: 62 RMIQMAVFKELVKLVDPGVKAWTPIKGRTNIVMFVGLQGSGKTTTCTKMAYYYVRKGWKC 121
Query: 133 ALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTS 192
ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGV+ F E ++IIVDTS
Sbjct: 122 ALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVDKFTNEGFEVIIVDTS 181
Query: 193 GRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMD 252
GRHKQE++LFEEM +S TV P+L+I+VMD+SIGQA QA+AFK V VGAVIVTK+D
Sbjct: 182 GRHKQESSLFEEMLAIS-TTVQPNLIIYVMDASIGQACEAQARAFKSKVDVGAVIVTKLD 240
Query: 253 GHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVV 312
GHA+GGGALSAVAAT+SP+IFIGTGEH+D+FE F VKPFVS+LLGMGD G +DK++E +
Sbjct: 241 GHARGGGALSAVAATQSPIIFIGTGEHIDDFEQFKVKPFVSKLLGMGDIEGLIDKVNE-L 299
Query: 313 PMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQA 372
+D EL++KL G FTLR MYEQF NI+KMGP Q+ +M+PGF ++LM E ES +
Sbjct: 300 KLDDNEELIEKLKHGEFTLRDMYEQFTNIMKMGPFNQILNMIPGFGADLMKGASEAESMS 359
Query: 373 KIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKI 429
++KR MT+MDSM++ ELDS KL +RI+R++RGSG REV E+L +Y + A +
Sbjct: 360 RLKRLMTIMDSMSDSELDSREGAKLFTKQPNRIIRVSRGSGVTQREVQELLTQYTKFAAV 419
Query: 430 WSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLK 466
KM G+K + + G+M ++N+N M+K L Q M K
Sbjct: 420 VKKMGGIKGLFRGGDM---AKNVNPTQMAK-LNQQMAK 453
>gi|386697615|gb|AFJ22268.1| signal recognition particle protein 54k, partial [Platyacarus sp.
n. AD1155]
Length = 463
Score = 552 bits (1422), Expect = e-154, Method: Compositional matrix adjust.
Identities = 269/454 (59%), Positives = 352/454 (77%), Gaps = 9/454 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LVI+VMD+SIGQA QA+AFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVIYVMDASIGQACEAQAKAFKNKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL + +R++R++RGSG REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRLIRVSRGSGVTQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 459
A + KM G+K + K G+ L++N+N+ M K+
Sbjct: 421 AAVVKKMGGIKGLFKTGD---LAKNVNSAQMLKL 451
>gi|386697583|gb|AFJ22252.1| signal recognition particle protein 54k, partial [Proctophyllodes
detruncatus]
Length = 453
Score = 552 bits (1422), Expect = e-154, Method: Compositional matrix adjust.
Identities = 269/454 (59%), Positives = 352/454 (77%), Gaps = 9/454 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LVI+VMD+SIGQA QA+AFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVIYVMDASIGQACEAQAKAFKNKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL + +R++R+ARG+G REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRLIRVARGAGVTQREVHELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 459
A + KM G+K + K G+ L++N+N+ M K+
Sbjct: 421 AAVVKKMGGIKGLFKTGD---LAKNVNSAQMLKL 451
>gi|386697585|gb|AFJ22253.1| signal recognition particle protein 54k, partial [Proctophyllodes
aff. detruncatus AD715]
Length = 464
Score = 552 bits (1422), Expect = e-154, Method: Compositional matrix adjust.
Identities = 269/454 (59%), Positives = 352/454 (77%), Gaps = 9/454 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LVI+VMD+SIGQA QA+AFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVIYVMDASIGQACEAQAKAFKNKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL + +R++R+ARG+G REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRLIRVARGAGVTQREVHELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 459
A + KM G+K + K G+ L++N+N+ M K+
Sbjct: 421 AAVVKKMGGIKGLFKTGD---LAKNVNSAQMLKL 451
>gi|386697179|gb|AFJ22050.1| signal recognition particle protein 54k, partial [Arrunsithiana nr.
spicantis AD764]
Length = 464
Score = 552 bits (1422), Expect = e-154, Method: Compositional matrix adjust.
Identities = 272/463 (58%), Positives = 357/463 (77%), Gaps = 10/463 (2%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ AI+ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ +++AAG
Sbjct: 3 ITTAIRSLGNATIINQEVLDNMLKEICAALIESDVNIILVKQLRENVRSVIDFEEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ +KG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKAWQPIKGKTNVIMFVGLQGIGKTTTCTKMAYYYLRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM +S A + P+L+++VMD+SIGQA QA+AFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAIS-AAIQPNLIVYVMDASIGQACEAQARAFKSKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE+F VKPF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFELFKVKPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FTLR MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTLRDMYEQLTNIMKMGPFNQILNMIPGFGAELSKCTSEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL + +RIMRI+RG+G REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIMRISRGAGVTQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
A + KM G+K + K G+ L++N+N M+K L Q M + I
Sbjct: 421 AAVVKKMGGIKGLFKSGD---LAKNVNPAQMAK-LNQQMARMI 459
>gi|386697457|gb|AFJ22189.1| signal recognition particle protein 54k, partial [Picalgoides sp.
AD1159]
Length = 464
Score = 552 bits (1422), Expect = e-154, Method: Compositional matrix adjust.
Identities = 272/463 (58%), Positives = 357/463 (77%), Gaps = 10/463 (2%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII++++L+ L EI AL+++DV LV++++ N++++++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEILDGLLKEICTALIESDVNIMLVKQLRENVRRVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDP ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFQELVKLLDPEVKAWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LVI+VMD+SIGQA QA+AFKQ V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVIYVMDASIGQACEAQAKAFKQKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PFVS+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVRPFVSKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL + +R++R+ARGSG REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRLVRVARGSGVSQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
A + KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 421 AAVVKKMGGIKGLFKSGD---LTKNVNPAQMAK-LNQQMAKMI 459
>gi|386697347|gb|AFJ22134.1| signal recognition particle protein 54k, partial [Bdellorhynchus
sp. AD706]
Length = 464
Score = 552 bits (1422), Expect = e-154, Method: Compositional matrix adjust.
Identities = 271/463 (58%), Positives = 357/463 (77%), Gaps = 10/463 (2%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ +KG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKAWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LVI+VMD+SIGQA QA+AFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVIYVMDASIGQACEAQARAFKNKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FT+R MYEQ NI+KMGP Q+ +MLPGF +EL E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMLPGFGAELAKCTTEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL + +RI+R+ARG+G REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVARGAGVTQREVQELLSQYSKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
+ + KM G+K + K G+ L++N+NA M++ L Q M + I
Sbjct: 421 SAMVKKMGGIKGLFKSGD---LAKNVNANQMAQ-LNQQMARMI 459
>gi|386697281|gb|AFJ22101.1| signal recognition particle protein 54k, partial [Hyperaspidacarus
sp. AD1206]
Length = 464
Score = 551 bits (1421), Expect = e-154, Method: Compositional matrix adjust.
Identities = 270/463 (58%), Positives = 357/463 (77%), Gaps = 10/463 (2%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKR++I A+F EL ++LDPG ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRKMIMTAVFKELVRLLDPGVKAWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LV++VMD+SIGQA QA+AFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVVYVMDASIGQACEAQARAFKNKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVRPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL + +R++R+ARGSG REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRVVRVARGSGVTQREVHELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
A + KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 421 AAVVKKMGGIKGLFKTGD---LTKNVNPAQMAK-LNQQMAKMI 459
>gi|386697483|gb|AFJ22202.1| signal recognition particle protein 54k, partial [Congocoptes
sphyrapicicola]
Length = 464
Score = 551 bits (1421), Expect = e-154, Method: Compositional matrix adjust.
Identities = 271/463 (58%), Positives = 357/463 (77%), Gaps = 10/463 (2%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++++++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDGLLKEICTALIESDVNIMLVKQLRENVRRVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I +A+F ELCK+LDP ++ P KGK + IMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMRAVFQELCKLLDPEVKAWQPIKGKTNXIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LVI+VMD+SIGQA QA+AFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVIYVMDASIGQACEAQARAFKSKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVRPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL + +RI+R+ARG+G REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVARGAGVTQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
A + KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 421 AAVVKKMGGIKGLFKSGD---LAKNVNPAQMAK-LNQQMAKMI 459
>gi|386697349|gb|AFJ22135.1| signal recognition particle protein 54k, partial [Bdellorhynchus
polymorphus]
gi|386697355|gb|AFJ22138.1| signal recognition particle protein 54k, partial [Zygochelifer cf.
ogarinus PBK-2011]
Length = 464
Score = 551 bits (1421), Expect = e-154, Method: Compositional matrix adjust.
Identities = 271/461 (58%), Positives = 355/461 (77%), Gaps = 10/461 (2%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG ++ P KGK +V+MFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKAWQPVKGKTNVVMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LVI+VMD+SIGQA QA+AFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVIYVMDASIGQACEAQARAFKNKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK+
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVS 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FT+R MYEQ NI+KMGP Q+ +MLPGF +EL E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMLPGFGAELAKCTSEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL + +RI+R+ARG+G REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVARGAGVTQREVQELLSQYSKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLK 466
+ + KM G+K + K G+ L++N+N+ M++ L Q M K
Sbjct: 421 SAVVKKMGGIKGLFKTGD---LTKNVNSNQMAQ-LNQQMAK 457
>gi|386697503|gb|AFJ22212.1| signal recognition particle protein 54k, partial [Dermatophagoides
sp. n. AD1210]
Length = 464
Score = 551 bits (1421), Expect = e-154, Method: Compositional matrix adjust.
Identities = 271/463 (58%), Positives = 358/463 (77%), Gaps = 10/463 (2%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++++++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDGLLKEICTALIESDVNIMLVKQLRENVRRVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I +A+F ELCK+LDP ++ P KGK +VIMFVGLQG GKTTTCTK AY++ KKG
Sbjct: 63 NKRRMIMRAVFQELCKLLDPEVKAWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYHYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LVI+VMD+SIGQA QA+AFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVIYVMDASIGQACEAQARAFKSKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVRPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL + +RI+R+ARG+G REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVARGAGVTQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
A + KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 421 AAVVKKMGGIKGLFKSGD---LAKNVNPAQMAK-LNQQMAKMI 459
>gi|386697643|gb|AFJ22282.1| signal recognition particle protein 54k, partial [Pterodectinae
gen. sp. AD648]
Length = 453
Score = 551 bits (1421), Expect = e-154, Method: Compositional matrix adjust.
Identities = 268/454 (59%), Positives = 352/454 (77%), Gaps = 9/454 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ +KG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKVWQPIKGKTNVIMFVGLQGIGKTTTCTKMAYYYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LVI+VMD+SIGQA QA+AFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVIYVMDASIGQACEAQAKAFKNKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL + +RI+R++RGSG REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIIRVSRGSGVTQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 459
A + KM G+K + K G+ +++N+N+ M K+
Sbjct: 421 AAVVKKMGGIKGLFKTGD---IAKNVNSAQMLKL 451
>gi|386697339|gb|AFJ22130.1| signal recognition particle protein 54k, partial [Cystoidosoma sp.
AD1160]
gi|386697341|gb|AFJ22131.1| signal recognition particle protein 54k, partial [Ascouracarus sp.
AD1241]
Length = 464
Score = 551 bits (1421), Expect = e-154, Method: Compositional matrix adjust.
Identities = 271/463 (58%), Positives = 355/463 (76%), Gaps = 10/463 (2%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKR++I A+F EL ++LDPG ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRKMIMTAVFKELVRLLDPGVKTWQPAKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFANENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LVI+VMD+SIGQA QA+AFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVIYVMDASIGQACEAQARAFKNKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK+
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVRPFISKLLGMGDIEGLIDKVT 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL + +RI+R+ARGSG REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVARGSGVTQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
A + KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 421 AAVVKKMGGIKGLFKSGD---LAKNVNPAQMAK-LNQQMAKMI 459
>gi|386697265|gb|AFJ22093.1| signal recognition particle protein 54k, partial [Dermonoton sp.
AD1250]
Length = 464
Score = 551 bits (1420), Expect = e-154, Method: Compositional matrix adjust.
Identities = 270/463 (58%), Positives = 356/463 (76%), Gaps = 10/463 (2%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKR++I A+F EL ++LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRKMIMTAVFKELVRLLDPGVKVWQPAKGKTNVIMFVGLQGIGKTTTCTKMAYYYLKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LV++VMD+SIGQA QA+AFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVVYVMDASIGQACESQARAFKNKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVRPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL + +R++R+ARGSG REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRMIRVARGSGVTQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
A + KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 421 AAVVKKMGGIKGLFKSGD---LTKNVNPAQMAK-LNQQMAKMI 459
>gi|386697083|gb|AFJ22002.1| signal recognition particle protein 54k, partial [Eniochthonius sp.
AD1066]
Length = 459
Score = 551 bits (1420), Expect = e-154, Method: Compositional matrix adjust.
Identities = 272/458 (59%), Positives = 354/458 (77%), Gaps = 10/458 (2%)
Query: 13 AIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKR 72
A++ + NATII+++VL+ L +I ALL+ADV KLV+ ++ N++ +++ +++AAG NKR
Sbjct: 2 ALRSLGNATIINKEVLDGLLKDICTALLEADVNIKLVKTLRENVRSVIDFEEMAAGLNKR 61
Query: 73 RIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKP 132
R+IQ A+F EL K++DPG +++P KG+ +V+MFVGLQGSGKTTTCTK AYY+ +KGWK
Sbjct: 62 RMIQMAVFKELVKLVDPGVKAWSPVKGRTNVVMFVGLQGSGKTTTCTKMAYYYVRKGWKC 121
Query: 133 ALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTS 192
ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F E ++IIVDTS
Sbjct: 122 ALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNEGFEIIIVDTS 181
Query: 193 GRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMD 252
GRHKQE++LFEEM +S T P+L+I+VMD+SIGQA QA+AFK V VGAVIVTK+D
Sbjct: 182 GRHKQESSLFEEMLAIS-TTTQPNLIIYVMDASIGQACESQARAFKSKVDVGAVIVTKLD 240
Query: 253 GHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVV 312
GHA+GGGALSAVAAT+SP+IFIGTGEH+D+FE F VKPFVS+LLGMGD G +DK++E +
Sbjct: 241 GHARGGGALSAVAATQSPIIFIGTGEHIDDFEQFKVKPFVSKLLGMGDIEGLIDKVNE-L 299
Query: 313 PMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQA 372
+D EL++KL G FTLR MYEQF NI+KMGP Q+ +M+PGF ++L+ E ES +
Sbjct: 300 KLDDNEELIEKLKHGEFTLRDMYEQFTNIMKMGPFNQILNMIPGFGADLIKGASEAESMS 359
Query: 373 KIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKI 429
++KR MT+MDSM++ ELDS KL SRI R+ARGSG REV E+L +Y + A +
Sbjct: 360 RLKRLMTIMDSMSDSELDSREGAKLFTKQPSRIQRVARGSGVTQREVQELLTQYTKFAAV 419
Query: 430 WSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLK 466
KM G+K + K G+M ++N+N M+K L Q M K
Sbjct: 420 VKKMGGIKGLFKGGDM---AKNVNPAQMAK-LNQQMAK 453
>gi|386697403|gb|AFJ22162.1| signal recognition particle protein 54k, partial [Dermoglyphus sp.
n. AD780]
Length = 464
Score = 551 bits (1420), Expect = e-154, Method: Compositional matrix adjust.
Identities = 270/463 (58%), Positives = 357/463 (77%), Gaps = 10/463 (2%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL ++LDPG ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMILMAVFKELIRLLDPGVKAWQPIKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK AL+CADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IV
Sbjct: 123 WKCALICADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LVI+VMD+SIGQA QA+AFK V VGA+I+T
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVIYVMDASIGQACEAQARAFKNKVDVGAIIIT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL + +RI+R++RG+G REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDTELDSREGAKLFSKQPTRIIRVSRGAGVTQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
A + KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 421 AAVVKKMGGIKGLFKSGD---LAKNVNPAQMAK-LNQQMAKMI 459
>gi|386697587|gb|AFJ22254.1| signal recognition particle protein 54k, partial [Proctophyllodes
ampelidis]
gi|386697599|gb|AFJ22260.1| signal recognition particle protein 54k, partial [Proctophyllodes
canadensis]
Length = 453
Score = 551 bits (1420), Expect = e-154, Method: Compositional matrix adjust.
Identities = 268/454 (59%), Positives = 352/454 (77%), Gaps = 9/454 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LVI+VMD+SIGQA QA+AFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVIYVMDASIGQACEAQAKAFKNKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL + +R++R++RG+G REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRLIRVSRGAGVTQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 459
A + KM G+K + K G+ L++N+N+ M K+
Sbjct: 421 AAVVKKMGGIKGLFKTGD---LAKNVNSAQMLKL 451
>gi|386697399|gb|AFJ22160.1| signal recognition particle protein 54k, partial [Tinamoglyphus sp.
AD1186]
Length = 464
Score = 551 bits (1419), Expect = e-154, Method: Compositional matrix adjust.
Identities = 273/462 (59%), Positives = 353/462 (76%), Gaps = 8/462 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDP + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFKELIKLLDPEVKVWQPIKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LVI+VMD+SIGQA QA+AFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVIYVMDASIGQACEAQARAFKNKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S ++KR MT+MDSM++ ELDS KL + +RI+R++RG+G REV E+L +Y +
Sbjct: 361 SMHRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVSRGAGVTQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
A + KM G+K KG L++N+NA M+K L Q M K I
Sbjct: 421 AAVVKKMGGIKGLFKG--GDLAKNVNASQMAK-LNQQMAKMI 459
>gi|386697381|gb|AFJ22151.1| signal recognition particle protein 54k, partial [Ptyssalges sp. n.
1 AD1157]
Length = 463
Score = 551 bits (1419), Expect = e-154, Method: Compositional matrix adjust.
Identities = 275/463 (59%), Positives = 355/463 (76%), Gaps = 10/463 (2%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII++ VL+ L EI AL+++DV KLV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQDVLDSLLKEICTALIESDVNIKLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRRII + +F EL K+LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRIIMERVFKELVKLLDPGVKVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
+K ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN ++IIV
Sbjct: 123 FKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LVI+VMD+SIGQA QAQAFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVIYVMDASIGQACESQAQAFKDKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPFVS++LGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFRVKPFVSKMLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL+ KL G FT+R MYEQ NI+KMGP Q+ +M+PGF ++L E E
Sbjct: 302 E-LKLDDNEELIGKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGADLAKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELD+ KL + +RI+R+ARGSG REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDAELDAREGAKLFSKQPTRIVRVARGSGVTQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
A + KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 421 AAVVKKMGGIKGLFKSGD---LAKNVNPAQMAK-LNQQMAKMI 459
>gi|386697379|gb|AFJ22150.1| signal recognition particle protein 54k, partial [Scutulanyssus
hirundicola]
Length = 464
Score = 551 bits (1419), Expect = e-154, Method: Compositional matrix adjust.
Identities = 275/463 (59%), Positives = 355/463 (76%), Gaps = 10/463 (2%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII++ VL+ L EI AL+++DV KLV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQDVLDSLLKEICTALIESDVNIKLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRRII + +F EL K+LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRIIMEGVFKELVKLLDPGVKIWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
+K ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN ++IIV
Sbjct: 123 FKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LVI+VMD+SIGQA QAQAFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVIYVMDASIGQACEGQAQAFKNKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPFVS++LGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFRVKPFVSKMLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL+ KL G FT+R MYEQ NI+KMGP Q+ +M+PGF ++L E E
Sbjct: 302 E-LKLDDNEELIGKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGADLAKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELD+ KL + +RI+R+ARGSG REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDAREGAKLFSKQPTRIVRVARGSGVTQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
A + KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 421 AAVVKKMGGIKGLFKSGD---LAKNVNPAQMAK-LNQQMAKMI 459
>gi|386697475|gb|AFJ22198.1| signal recognition particle protein 54k, partial [aff. Paralgopsis
sp. AD733]
gi|386697477|gb|AFJ22199.1| signal recognition particle protein 54k, partial [aff. Paralgopsis
sp. D AD1162]
Length = 464
Score = 551 bits (1419), Expect = e-154, Method: Compositional matrix adjust.
Identities = 272/463 (58%), Positives = 356/463 (76%), Gaps = 10/463 (2%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII++++L+ L EI AL+++DV LV++++ N++++++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEILDGLLKEICTALIESDVNIMLVKQLRENVRRVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDP + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFQELVKLLDPEVKVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LVI+VMD+SIGQA QA+AFKQ V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVIYVMDASIGQACEAQAKAFKQKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PFVS+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVRPFVSKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL + +R++R+ARGSG REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRLVRVARGSGVSQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
A + KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 421 AAVVKKMGGIKGLFKSGD---LTKNVNPAQMAK-LNQQMAKMI 459
>gi|386697581|gb|AFJ22251.1| signal recognition particle protein 54k, partial [Proctophyllodes
scolopacinus]
gi|386697589|gb|AFJ22255.1| signal recognition particle protein 54k, partial [Joubertophyllodes
modularis]
gi|386697591|gb|AFJ22256.1| signal recognition particle protein 54k, partial [Joubertophyllodes
proximus]
gi|386697593|gb|AFJ22257.1| signal recognition particle protein 54k, partial [Joubertophyllodes
ampulaceus]
gi|386697595|gb|AFJ22258.1| signal recognition particle protein 54k, partial [Proctophyllodes
clavatus]
gi|386697597|gb|AFJ22259.1| signal recognition particle protein 54k, partial [Proctophyllodes
spini]
gi|386697619|gb|AFJ22270.1| signal recognition particle protein 54k, partial [Nycteridocaulus
sp. AD1194]
gi|386697621|gb|AFJ22271.1| signal recognition particle protein 54k, partial [Proctophyllodinae
sp. AD1212]
gi|386697623|gb|AFJ22272.1| signal recognition particle protein 54k, partial [Nycteridocaulus
sp. AD1243]
gi|386697625|gb|AFJ22273.1| signal recognition particle protein 54k, partial [Nycteridocaulus
sp. AD1176]
Length = 464
Score = 551 bits (1419), Expect = e-154, Method: Compositional matrix adjust.
Identities = 268/454 (59%), Positives = 352/454 (77%), Gaps = 9/454 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LVI+VMD+SIGQA QA+AFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVIYVMDASIGQACEAQAKAFKNKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL + +R++R++RG+G REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRLIRVSRGAGVTQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 459
A + KM G+K + K G+ L++N+N+ M K+
Sbjct: 421 AAVVKKMGGIKGLFKTGD---LAKNVNSAQMLKL 451
>gi|386697185|gb|AFJ22053.1| signal recognition particle protein 54k, partial [Chortoglyphus
arcuatus]
Length = 464
Score = 551 bits (1419), Expect = e-154, Method: Compositional matrix adjust.
Identities = 273/463 (58%), Positives = 356/463 (76%), Gaps = 10/463 (2%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ AI+ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTAIRSLGNATIINQEVLDNMLKEICAALIESDVNIILVKKLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG ++TP KGK +VIMFVGLQG GKTTTCTK AY++ +KG
Sbjct: 63 NKRRMIMMAVFQELVKLLDPGVKAWTPVKGKTNVIMFVGLQGIGKTTTCTKMAYHYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM +S A V P+L+++VMD+SIGQA QA+AFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAIS-AAVQPNLIVYVMDASIGQACEAQARAFKSKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FTLR MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTLRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKGTSEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM + ELDS K + +RI+R+ARGSG REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMADCELDSREGAKFFSKQPTRIVRVARGSGVTQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
A++ KM G+K + K G+ LS+N+N M++ L Q M + I
Sbjct: 421 AQVVKKMGGIKGLFKSGD---LSKNVNPAQMAR-LNQQMARMI 459
>gi|386697541|gb|AFJ22231.1| signal recognition particle protein 54k, partial [Trouessartia sp.
AD952]
gi|386697549|gb|AFJ22235.1| signal recognition particle protein 54k, partial [Trouessartia sp.
n. AD694]
gi|386697551|gb|AFJ22236.1| signal recognition particle protein 54k, partial [Trouessartia sp.
n. AD642]
Length = 464
Score = 551 bits (1419), Expect = e-154, Method: Compositional matrix adjust.
Identities = 271/463 (58%), Positives = 356/463 (76%), Gaps = 10/463 (2%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLREICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG ++ P KG+ +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKAWQPVKGRTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LVI+VMD+SIGQA QA+AFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVIYVMDASIGQACEAQARAFKNKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAAT SP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATNSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL + +RI+R++RGSG REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVSRGSGVTQREVQELLNQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
A + KM G+K + K G+ L++N+N M++ L Q M K I
Sbjct: 421 AAVVKKMGGIKGLFKSGD---LAKNVNPAQMAR-LNQQMAKMI 459
>gi|195376317|ref|XP_002046943.1| GJ13160 [Drosophila virilis]
gi|194154101|gb|EDW69285.1| GJ13160 [Drosophila virilis]
Length = 508
Score = 551 bits (1419), Expect = e-154, Method: Compositional matrix adjust.
Identities = 281/490 (57%), Positives = 376/490 (76%), Gaps = 16/490 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A+ +S AT+I+E+ L+ L EI ALL+ADV + V++++ N++ ++
Sbjct: 1 MVLADLGRKITTALHSLSKATVINEEALSAMLKEICAALLEADVNIRQVKQLRENVRAVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ D++A G NKRR+IQ A+F EL K++DPG + P KGK +VIMFVGLQGSGKTTTCTK
Sbjct: 61 DFDEMAGGLNKRRMIQSAVFKELIKLVDPGVKPYQPVKGKANVIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++QK+ WK LVCADTFRAGA+DQ+KQNATKA+IPFYGSYTE DPV IA EGV+ FK
Sbjct: 121 LAYHYQKRNWKSCLVCADTFRAGAYDQIKQNATKARIPFYGSYTEIDPVVIAQEGVDMFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
+E ++IIVDTSGRHKQE +LFEEM VS A V+PD +IFVMD++IGQA QA+AFK+
Sbjct: 181 REGFEMIIVDTSGRHKQEESLFEEMLAVSNA-VSPDNIIFVMDATIGQACEAQAKAFKEK 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V +G+VI+TK+DGHAKGGGALSAVAAT+SP+IFIGTGEH+D+ E F KPFVS+LLGMGD
Sbjct: 240 VDIGSVIITKLDGHAKGGGALSAVAATQSPIIFIGTGEHIDDLEPFKTKPFVSKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G +DK++E + +D ELL+K+ G+FT+R MYEQFQNI+KMGP Q+ +M+PGFS +
Sbjct: 300 IEGLIDKVNE-LKLDGNEELLEKIKHGHFTIRDMYEQFQNIMKMGPFSQIMNMIPGFSQD 358
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQVREVM 417
M KG E+ES A+IKR MTMMDSM++ ELD+ + KL + +R +R+A G+G REV
Sbjct: 359 FMTKGGEQESMARIKRMMTMMDSMSDSELDNRDGAKLFSKQPTRCIRVAHGAGVIEREVK 418
Query: 418 EMLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNA-------QHMSKVLPQGMLKQIG 469
E++ Y + A + KM G+K + K+G+M ++N+N Q M+K++ ML+Q+G
Sbjct: 419 ELIAHYTKFAAVVKKMGGVKGLFKQGDM---TKNVNPTQMAKLNQQMAKMIDPRMLQQMG 475
Query: 470 GVGGLQNLMK 479
GVGGLQN+M+
Sbjct: 476 GVGGLQNMMR 485
>gi|386697675|gb|AFJ22298.1| signal recognition particle protein 54k, partial [Olistrophorus
blarinae]
Length = 453
Score = 551 bits (1419), Expect = e-154, Method: Compositional matrix adjust.
Identities = 267/454 (58%), Positives = 352/454 (77%), Gaps = 9/454 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV KLV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLREICTALIESDVNIKLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I ++F EL K+LDPG + P KG+ +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMSVFKELVKLLDPGVKVWQPVKGRTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
W+ ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WRCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFSNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LVI+VMD+SIGQA QA+AFK+ V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVIYVMDASIGQACEGQAKAFKEKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF EL E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGPELAKCASETE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL + +RI+R+ARGSG REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVARGSGVTQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 459
A + KM G+K + K G+ L++N+N M+K+
Sbjct: 421 AAVVKKMGGIKGLFKSGD---LTKNVNPAQMAKL 451
>gi|386697609|gb|AFJ22265.1| signal recognition particle protein 54k, partial [Monojoubertia
microphylla]
Length = 464
Score = 551 bits (1419), Expect = e-154, Method: Compositional matrix adjust.
Identities = 268/454 (59%), Positives = 352/454 (77%), Gaps = 9/454 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LVI+VMD+SIGQA QA+AFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVIYVMDASIGQACEAQAKAFKNKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL + +R++R++RG+G REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRLVRVSRGAGVTQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 459
A + KM G+K + K G+ L++N+N+ M K+
Sbjct: 421 AAVVKKMGGIKGLFKTGD---LTKNVNSAQMLKL 451
>gi|386697099|gb|AFJ22010.1| signal recognition particle protein 54k, partial [Trhypochthonius
americanus]
Length = 460
Score = 551 bits (1419), Expect = e-154, Method: Compositional matrix adjust.
Identities = 270/458 (58%), Positives = 356/458 (77%), Gaps = 10/458 (2%)
Query: 13 AIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKR 72
A++ + NATII+++VL+ L +I ALL+ADV KLV++++ N++ +++ D++AAG NKR
Sbjct: 2 ALRSLGNATIINKEVLDGLLKDICTALLEADVNIKLVKQLRENVRSVIDFDEMAAGLNKR 61
Query: 73 RIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKP 132
R+IQ A+F EL K++DPG ++ P KG+ +++MFVGLQGSGKTTTCTK AYY+ +KGWK
Sbjct: 62 RMIQMAVFKELVKLVDPGVKAWQPVKGRTNIVMFVGLQGSGKTTTCTKMAYYYVRKGWKC 121
Query: 133 ALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTS 192
ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F E ++IIVDTS
Sbjct: 122 ALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVIIASEGVEKFTNEGFEIIIVDTS 181
Query: 193 GRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMD 252
GRHKQE++LFEEM +S T P+L+I+VMD+SIGQA QA+AFK V VGAVIVTK+D
Sbjct: 182 GRHKQESSLFEEMLAIS-TTTQPNLIIYVMDASIGQACEAQARAFKNKVDVGAVIVTKLD 240
Query: 253 GHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVV 312
GHA+GGGALSAVAAT+SP+IFIGTGEH+D+FE F VKPFVS+LLGMGD G +DK++E +
Sbjct: 241 GHARGGGALSAVAATQSPIIFIGTGEHIDDFEQFKVKPFVSKLLGMGDIEGLIDKVNE-L 299
Query: 313 PMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQA 372
+D EL++KL G FTLR MYEQF NI+KMGP Q+ +M+PGF ++L+ E ES +
Sbjct: 300 KLDDNEELIEKLKHGEFTLRDMYEQFTNIMKMGPFNQILNMIPGFGADLVKGASEAESMS 359
Query: 373 KIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKI 429
++KR MT+MDSM++ ELDS KL +RI+R++RGSG REV E+L +Y + A +
Sbjct: 360 RLKRLMTIMDSMSDSELDSREGAKLFTKQPTRIIRVSRGSGVTQREVQELLTQYTKFAAV 419
Query: 430 WSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLK 466
KM G+K + K G+M ++N+N+ M+K L Q M K
Sbjct: 420 VKKMGGIKGLFKGGDM---AKNVNSTQMAK-LNQQMAK 453
>gi|386697633|gb|AFJ22277.1| signal recognition particle protein 54k, partial [Alaudicola
bureschi]
Length = 464
Score = 551 bits (1419), Expect = e-154, Method: Compositional matrix adjust.
Identities = 268/454 (59%), Positives = 352/454 (77%), Gaps = 9/454 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ +KG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKVWQPIKGKTNVIMFVGLQGIGKTTTCTKMAYYYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LVI+VMD+SIGQA QA+AFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVIYVMDASIGQACEAQAKAFKNKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL + +RI+R+ARG+G REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVARGAGVTQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 459
A + KM G+K + K G+ +++N+N+ M K+
Sbjct: 421 AAVVKKMGGIKGLFKTGD---IAKNVNSAQMLKL 451
>gi|386697283|gb|AFJ22102.1| signal recognition particle protein 54k, partial [Falculiferidae
sp. AD1207]
Length = 464
Score = 551 bits (1419), Expect = e-154, Method: Compositional matrix adjust.
Identities = 270/463 (58%), Positives = 356/463 (76%), Gaps = 10/463 (2%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKR++I A+F EL ++LDPG ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRKMIMTAVFKELVRLLDPGVKAWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LV++VMD+SIGQA QA+AFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVVYVMDASIGQACEAQARAFKNKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVRPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL + +RI+R+ARGSG REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVARGSGVTQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
A + KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 421 AAVVKKMGGIKGLFKTGD---LAKNVNPAQMAK-LNQQMAKMI 459
>gi|386697321|gb|AFJ22121.1| signal recognition particle protein 54k, partial [Aetacarus sp. n.
AD537]
Length = 450
Score = 551 bits (1419), Expect = e-154, Method: Compositional matrix adjust.
Identities = 265/453 (58%), Positives = 352/453 (77%), Gaps = 9/453 (1%)
Query: 11 SRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHN 70
+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG N
Sbjct: 1 TSALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGLN 60
Query: 71 KRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGW 130
KR++I A+F L K+LDPG P + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKGW
Sbjct: 61 KRKMIMTAVFRNLVKLLDPGVPVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKGW 120
Query: 131 KPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVD 190
K ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IVD
Sbjct: 121 KCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIVIVD 180
Query: 191 TSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 250
TSGRHKQE++LFEEM + +A + P+LV++VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 181 TSGRHKQESSLFEEMLAI-QAAIQPNLVVYVMDASIGQACESQARAFKNKVDVGAIIVTK 239
Query: 251 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 310
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F+V+PF+S+LLGMGD G +DK++E
Sbjct: 240 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFEVEPFISKLLGMGDIKGLIDKVNE 299
Query: 311 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 370
+ +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 300 -LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAES 358
Query: 371 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 427
+++KR MT+MDSM++ ELDS KL + +RI+R+ARGSG REV E+L +Y + A
Sbjct: 359 MSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVARGSGVTQREVQELLSQYTKFA 418
Query: 428 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 459
+ KM G+K + + G+ L++N+N M+K+
Sbjct: 419 AVVKKMGGIKGLFRSGD---LAKNVNPAQMAKL 448
>gi|386697465|gb|AFJ22193.1| signal recognition particle protein 54k, partial [Mesalgoides sp.
AD637]
Length = 464
Score = 550 bits (1418), Expect = e-154, Method: Compositional matrix adjust.
Identities = 272/463 (58%), Positives = 356/463 (76%), Gaps = 10/463 (2%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII++++L+ L EI AL+++DV LV++++ N++++++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEILDGLLKEICTALIESDVNILLVKQLRENVRRVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDP + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFQELVKLLDPEVKVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LVI+VMD+SIGQA QA+AFKQ V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVIYVMDASIGQACEAQAKAFKQKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PFVS+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVRPFVSKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL + +R++R+ARGSG REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRLVRVARGSGVSQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
A + KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 421 AAVVKKMGGIKGLFKSGD---LTKNVNPAQMAK-LNQQMAKMI 459
>gi|386697273|gb|AFJ22097.1| signal recognition particle protein 54k, partial [Freyana
lophodytes]
Length = 464
Score = 550 bits (1418), Expect = e-154, Method: Compositional matrix adjust.
Identities = 268/463 (57%), Positives = 358/463 (77%), Gaps = 10/463 (2%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI +AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICKALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKR++I A+F EL ++LDPG ++ P KGK ++IMFVGLQG GKTTTCTK AYY+ +KG
Sbjct: 63 NKRKMIMTAVFKELVRLLDPGVKAWQPAKGKTNIIMFVGLQGIGKTTTCTKMAYYYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LV++VMD+SIGQA QA+AFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVVYVMDASIGQACESQARAFKNKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVRPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLDDNGELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++K+ MT+MDSM++ ELDS KL + +RI+R+ARGSG REV E+L +Y +
Sbjct: 361 SMSRLKQMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVARGSGVTQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
A + KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 421 AAVVKKMGGIKGLFKSGD---LTKNVNPAQMAK-LNQQMAKMI 459
>gi|386697467|gb|AFJ22194.1| signal recognition particle protein 54k, partial [Mesalgoides sp.
AD871]
Length = 464
Score = 550 bits (1418), Expect = e-154, Method: Compositional matrix adjust.
Identities = 272/463 (58%), Positives = 356/463 (76%), Gaps = 10/463 (2%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII++++L+ L EI AL+++DV LV++++ N++++++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEILDGLLKEICTALIESDVNIMLVKQLRENVRRVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDP + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFQELVKLLDPEVKVWQPIKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LVI+VMD+SIGQA QA+AFKQ V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVIYVMDASIGQACEAQAKAFKQKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PFVS+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVRPFVSKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL + +R++R+ARGSG REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRLVRVARGSGVSQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
A + KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 421 AAVVKKMGGIKGLFKSGD---LTKNVNPAQMAK-LNQQMAKMI 459
>gi|386697501|gb|AFJ22211.1| signal recognition particle protein 54k, partial [Dermatophagoides
farinae]
Length = 464
Score = 550 bits (1418), Expect = e-154, Method: Compositional matrix adjust.
Identities = 272/463 (58%), Positives = 356/463 (76%), Gaps = 10/463 (2%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++++++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDGLLKEICTALIESDVNIMLVKKLRENVRRVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I +A+F ELCK+LDP ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMRAVFQELCKLLDPEVKAWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYLKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIAPEGVEKFTNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LVI+VMD+SIGQA QA AFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVIYVMDASIGQACEAQALAFKSKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK+
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVRPFISKLLGMGDIEGLIDKVS 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL + +RI+R+ARG+G REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIIRVARGAGVTQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
A + KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 421 AAVVKKMGGIKGLFKSGD---LAKNVNPAQMAK-LNQQMAKMI 459
>gi|386697469|gb|AFJ22195.1| signal recognition particle protein 54k, partial [Mesalgoides sp.
AD867]
Length = 464
Score = 550 bits (1418), Expect = e-154, Method: Compositional matrix adjust.
Identities = 272/463 (58%), Positives = 356/463 (76%), Gaps = 10/463 (2%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII++++L+ L EI AL+++DV LV++++ N++++++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEILDGLLKEICTALIESDVNILLVKQLRENVRRVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDP + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFQELVKLLDPEVKVWQPIKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LVI+VMD+SIGQA QA+AFKQ V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVIYVMDASIGQACEAQAKAFKQKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PFVS+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVRPFVSKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL + +R++R+ARGSG REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRLVRVARGSGVSQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
A + KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 421 AAVVKKMGGIKGLFKSGD---LTKNVNPAQMAK-LNQQMAKMI 459
>gi|386697653|gb|AFJ22287.1| signal recognition particle protein 54k, partial [Trochilodectes
sp. AD1138]
gi|386697655|gb|AFJ22288.1| signal recognition particle protein 54k, partial [Trochilodectes
sp. AD1236]
Length = 464
Score = 550 bits (1418), Expect = e-154, Method: Compositional matrix adjust.
Identities = 269/454 (59%), Positives = 351/454 (77%), Gaps = 9/454 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI ALL++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALLESDVNVMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ +KG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKVWQPIKGKTNVIMFVGLQGIGKTTTCTKMAYYYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LVI+VMD+SIGQA QA+AFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVIYVMDASIGQACEAQAKAFKNKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL + +RI+R++RGSG REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIIRVSRGSGVTQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 459
A + KM G+K + K G+ +++N+N M K+
Sbjct: 421 AAVVKKMGGIKGLFKTGD---IAKNVNPTQMLKL 451
>gi|386697453|gb|AFJ22187.1| signal recognition particle protein 54k, partial [Picalgoides sp.
n. AD582]
Length = 453
Score = 550 bits (1418), Expect = e-154, Method: Compositional matrix adjust.
Identities = 267/454 (58%), Positives = 353/454 (77%), Gaps = 9/454 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII++++L+ L EI AL+++DV LV++++ N++++++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEILDGLLKEICTALIESDVNIMLVKQLRENVRRVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDP ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFQELVKLLDPEVKAWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LVI+VMD+SIGQA QA+AFKQ V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVIYVMDASIGQACEAQAKAFKQKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PFVS+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVRPFVSKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL + +R++R+ARGSG REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRLVRVARGSGVSQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 459
A + KM G+K + K G+ L++N+N M+K+
Sbjct: 421 AAVVKKMGGIKGLFKSGD---LTKNVNPAQMAKL 451
>gi|386697447|gb|AFJ22184.1| signal recognition particle protein 54k, partial [Hyomesalges sp.
AD1028]
Length = 460
Score = 550 bits (1417), Expect = e-154, Method: Compositional matrix adjust.
Identities = 272/460 (59%), Positives = 355/460 (77%), Gaps = 10/460 (2%)
Query: 13 AIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKR 72
A++ + NATII+++VL+ L EI AL+++DV KLV++++ N++++++ D++AAG NKR
Sbjct: 2 ALRSLGNATIINQEVLDGLLKEICTALIESDVNIKLVKQLRENVRRVIDFDEMAAGLNKR 61
Query: 73 RIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKP 132
R+I A+F EL K+LDP + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKGW+
Sbjct: 62 RMIMMAVFQELVKLLDPEVKVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKGWRC 121
Query: 133 ALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTS 192
ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IVDTS
Sbjct: 122 ALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIVIVDTS 181
Query: 193 GRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMD 252
GRHKQE++LFEEM + +A + P+LVI+VMD+SIGQA QA AFKQ V VGA+IVTK+D
Sbjct: 182 GRHKQESSLFEEMLAI-QAAIQPNLVIYVMDASIGQACEAQALAFKQKVDVGAIIVTKLD 240
Query: 253 GHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVV 312
GHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK++E +
Sbjct: 241 GHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVRPFISKLLGMGDIEGLIDKVNE-L 299
Query: 313 PMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQA 372
+D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES +
Sbjct: 300 KLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAESMS 359
Query: 373 KIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKI 429
++KR MT+MDSM++ ELDS KL + +RI+R+ARG+G REV E+L +Y + A +
Sbjct: 360 RLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVARGAGVTQREVQELLSQYTKFAAV 419
Query: 430 WSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 420 VKKMGGIKGLFKSGD---LAKNVNPAQMAK-LNQQMAKMI 455
>gi|386697449|gb|AFJ22185.1| signal recognition particle protein 54k, partial [Picalgoides sp.
n. AD787]
Length = 464
Score = 550 bits (1417), Expect = e-154, Method: Compositional matrix adjust.
Identities = 272/463 (58%), Positives = 356/463 (76%), Gaps = 10/463 (2%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII++++L+ L EI AL+++DV LV++++ N++K+++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEILDGLLKEICTALIESDVNIMLVKQLRENVRKVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDP + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFQELVKLLDPEVKVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LVI+VMD+SIGQA QA+AFKQ V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVIYVMDASIGQACEAQAKAFKQKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PFVS+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVRPFVSKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL + +R++R+ARG+G REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRLVRVARGAGVSQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
A + KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 421 AAVVKKMGGIKGLFKSGD---LTKNVNPAQMAK-LNQQMAKMI 459
>gi|386697411|gb|AFJ22166.1| signal recognition particle protein 54k, partial [Metanalges sp.
AD874]
Length = 452
Score = 550 bits (1417), Expect = e-154, Method: Compositional matrix adjust.
Identities = 268/454 (59%), Positives = 352/454 (77%), Gaps = 9/454 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+Q+DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDNLLKEICTALIQSDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG + P+KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFYELVKLLDPGVKVWQPQKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFSKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LVI+VMD+SIGQA QA+AFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVIYVMDASIGQACEAQARAFKNKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL + +RI+R++RG+G REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIIRVSRGAGVTQREVQELLNQYSKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 459
A + KM G+K + K G+ ++N+N M+K+
Sbjct: 421 AGVVKKMGGIKGLFKSGDP---AKNVNPAQMAKL 451
>gi|386697385|gb|AFJ22153.1| signal recognition particle protein 54k, partial [Ptyssalges sp.
AD1171]
gi|386697387|gb|AFJ22154.1| signal recognition particle protein 54k, partial [Ptyssalges sp. A
PBK-2011]
Length = 463
Score = 550 bits (1417), Expect = e-154, Method: Compositional matrix adjust.
Identities = 275/463 (59%), Positives = 355/463 (76%), Gaps = 10/463 (2%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII++ VL+ L EI AL+++DV KLV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQDVLDSLLKEICTALIESDVNIKLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRRII + +F EL K+LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRIIMERVFKELVKLLDPGVKVWQPVKGKINVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
+K ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN ++IIV
Sbjct: 123 FKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LVI+VMD+SIGQA QAQAFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVIYVMDASIGQACESQAQAFKDKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPFVS++LGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFRVKPFVSKMLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL+ KL G FT+R MYEQ NI+KMGP Q+ +M+PGF ++L E E
Sbjct: 302 E-LKLDDNEELIGKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGADLAKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELD+ KL + +RI+R+ARGSG REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDAELDAREGAKLFSKQPTRIVRVARGSGVTQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
A + KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 421 AAVVKKMGGIKGLFKSGD---LAKNVNPAQMAK-LNQQMAKMI 459
>gi|386697669|gb|AFJ22295.1| signal recognition particle protein 54k, partial [Afrolistrophorus
sp. n. AD730]
Length = 464
Score = 550 bits (1417), Expect = e-154, Method: Compositional matrix adjust.
Identities = 271/463 (58%), Positives = 355/463 (76%), Gaps = 10/463 (2%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV KLV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLREICTALIESDVNIKLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I ++F EL K+LDPG + P KG+ +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMSVFKELVKLLDPGIKVWQPVKGRTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
W+ ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WRCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFSSENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LVI+VMD+SIGQA QA+AFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVIYVMDASIGQACEAQAKAFKDKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF EL E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGPELAKCASETE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL + +RI+R++RGSG REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVSRGSGVTQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
A + KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 421 AAVVKKMGGIKGLFKSGD---LTKNVNPAQMAK-LNQQMAKMI 459
>gi|386697151|gb|AFJ22036.1| signal recognition particle protein 54k, partial [Vidia sp. AD1098]
Length = 453
Score = 550 bits (1417), Expect = e-154, Method: Compositional matrix adjust.
Identities = 266/453 (58%), Positives = 349/453 (77%), Gaps = 7/453 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV KLV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIKLVKQLRENVRTVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKR++I A+F EL K+LDPG ++ P KG+ +VIMFVGLQG GKTTTCTK AYY+ KK
Sbjct: 63 NKRKMIMTAVFQELVKLLDPGVKAWQPVKGRTNVIMFVGLQGIGKTTTCTKMAYYYMKKN 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK +LVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCSLVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIATEGVEKFANENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM +S A + PDL+++VMD+SIGQA QA+AFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAIS-AAIQPDLIVYVMDASIGQACEAQAKAFKGKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FTLR MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTLRDMYEQLTNIMKMGPFNQILNMIPGFGAELSKCTSEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM + ELDS KL + +RI+R+ARG+G REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMADSELDSREGAKLFSKQPTRIVRVARGAGVTQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKV 459
A + KM G+K KG L++N+N M+K+
Sbjct: 421 AAVVKKMGGIKGLFKG--GDLTKNVNPTQMAKL 451
>gi|386697297|gb|AFJ22109.1| signal recognition particle protein 54k, partial [Grallolichus sp.
AD907]
Length = 464
Score = 550 bits (1417), Expect = e-154, Method: Compositional matrix adjust.
Identities = 269/463 (58%), Positives = 356/463 (76%), Gaps = 10/463 (2%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKR++I A+F EL ++LDPG ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRKMIMTAVFKELVRLLDPGVKAWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LV++VMD+SIGQA QA+AFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVVYVMDASIGQACESQARAFKNKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVRPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLDDNGELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL + +R++R+ARGSG REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRVVRVARGSGVAQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
A + KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 421 AAVVKKMGGIKGLFKSGD---LAKNVNPTQMAK-LNQQMAKMI 459
>gi|386697663|gb|AFJ22292.1| signal recognition particle protein 54k, partial [Rhamphocaulus sp.
2B PBK-2011]
Length = 464
Score = 550 bits (1417), Expect = e-154, Method: Compositional matrix adjust.
Identities = 267/454 (58%), Positives = 352/454 (77%), Gaps = 9/454 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ +KG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKAWQPIKGKTNVIMFVGLQGIGKTTTCTKMAYYYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LVI+VMD+SIGQA QA+AFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVIYVMDASIGQACEAQAKAFKNKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL + +RI+R++RG+G REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIIRVSRGAGVTQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 459
A + KM G+K + K G+ +++N+N M K+
Sbjct: 421 AAVVKKMGGIKGLFKTGD---IAKNVNPTQMLKL 451
>gi|386697383|gb|AFJ22152.1| signal recognition particle protein 54k, partial [Ptyssalges sp. A
PBK-2011]
Length = 464
Score = 550 bits (1417), Expect = e-154, Method: Compositional matrix adjust.
Identities = 275/463 (59%), Positives = 355/463 (76%), Gaps = 10/463 (2%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII++ VL+ L EI AL+++DV KLV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQDVLDSLLKEICTALIESDVNIKLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRRII + +F EL K+LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRIIMERVFKELVKLLDPGVKVWQPVKGKINVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
+K ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN ++IIV
Sbjct: 123 FKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LVI+VMD+SIGQA QAQAFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVIYVMDASIGQACESQAQAFKDKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPFVS++LGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFRVKPFVSKMLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL+ KL G FT+R MYEQ NI+KMGP Q+ +M+PGF ++L E E
Sbjct: 302 E-LKLDDNEELIGKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGADLAKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELD+ KL + +RI+R+ARGSG REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDAELDAREGAKLFSKQPTRIVRVARGSGVTQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
A + KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 421 AAVVKKMGGIKGLFKSGD---LAKNVNPAQMAK-LNQQMAKMI 459
>gi|386697373|gb|AFJ22147.1| signal recognition particle protein 54k, partial [Sturnotrogus
truncatus]
Length = 464
Score = 550 bits (1417), Expect = e-154, Method: Compositional matrix adjust.
Identities = 275/463 (59%), Positives = 354/463 (76%), Gaps = 10/463 (2%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII++ VL+ L EI AL+++DV KLV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQDVLDSLLKEICTALIESDVNIKLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRRII + +F EL K+LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRIIMEGVFKELVKLLDPGVKIWQPTKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
+K ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN ++IIV
Sbjct: 123 FKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LVI+VMD+SIGQA QAQAFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVIYVMDASIGQACEGQAQAFKNKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPFVS++LGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFRVKPFVSKMLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL+ KL G FT+R MYEQ NI+KMGP Q+ +M+PGF ++L E E
Sbjct: 302 E-LKLDDNEELIGKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGADLAKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELD+ KL + +RI+R ARGSG REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDAREGAKLFSKQPTRIVRXARGSGVTQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
A + KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 421 AAVVKKMGGIKGLFKSGD---LAKNVNPAQMAK-LNQQMAKMI 459
>gi|386697295|gb|AFJ22108.1| signal recognition particle protein 54k, partial [Grallobia
fulicae]
Length = 464
Score = 550 bits (1417), Expect = e-154, Method: Compositional matrix adjust.
Identities = 270/463 (58%), Positives = 356/463 (76%), Gaps = 10/463 (2%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKR++I A+F EL ++LDPG ++ P KGK +VIMFVGLQG GKTTT TK AYY+ KKG
Sbjct: 63 NKRKMIMTAVFKELVRLLDPGVKAWQPVKGKTNVIMFVGLQGIGKTTTVTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LV++VMD+SIGQA QA+AFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVVYVMDASIGQACESQARAFKNKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVRPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D ELL+KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLDDNEELLEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL + +R++R+ARGSG REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRVVRVARGSGVSQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
A + KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 421 AAVVKKMGGIKGLFKSGD---LAKNVNPAQMAK-LNQQMAKMI 459
>gi|386697097|gb|AFJ22009.1| signal recognition particle protein 54k, partial [Afronothrus sp.
AD453]
Length = 453
Score = 550 bits (1417), Expect = e-154, Method: Compositional matrix adjust.
Identities = 265/454 (58%), Positives = 353/454 (77%), Gaps = 9/454 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L ++ ALL+ADV KLV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINKEVLDGLLKDVCTALLEADVNIKLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+IQ A+F EL K++DPG ++ P KG+ +++MFVGLQGSGKTTTCTK AYY+ +KG
Sbjct: 63 NKRRMIQMAVFKELVKLVDPGVKAWQPVKGRTNIVMFVGLQGSGKTTTCTKMAYYYVRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F E ++I+V
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNEGFEIIVV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM +S T P+L+I+VMD+SIGQA QA+AFK V VGAVIVT
Sbjct: 183 DTSGRHKQESSLFEEMLAIS-TTTQPNLIIYVMDASIGQACEAQARAFKSKVDVGAVIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHA+GGGALSAVAAT+SP+IFIGTGEH+D+FE F VKPFVS+LLGMGD G +DK++
Sbjct: 242 KLDGHARGGGALSAVAATQSPIIFIGTGEHIDDFEQFKVKPFVSKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FTLR MYEQF NI+KMGP Q+ +M+PGF ++L+ E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTLRDMYEQFTNIMKMGPFSQILNMIPGFGADLVKGASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL +RI R++RGSG REV E+L +Y +
Sbjct: 361 SMSRLKRLMTIMDSMSDSELDSREGAKLFTKQPTRIARVSRGSGVTQREVQELLTQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 459
A + KM G+K + K G+M ++N+N M+K+
Sbjct: 421 AAVVKKMGGIKGLFKGGDM---AKNVNPTQMAKL 451
>gi|386697451|gb|AFJ22186.1| signal recognition particle protein 54k, partial [Picalgoides
picimajoris]
Length = 464
Score = 550 bits (1417), Expect = e-154, Method: Compositional matrix adjust.
Identities = 272/463 (58%), Positives = 355/463 (76%), Gaps = 10/463 (2%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII++++L+ L EI AL+++DV LV++++ N++++++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEILDGLLKEICTALIESDVNIMLVKQLRENVRRVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDP + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFQELVKLLDPEVKVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LVI+VMD+SIGQA QA+AFKQ V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVIYVMDASIGQACEAQAKAFKQKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PFVS+LLGMGD G +DK+
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVRPFVSKLLGMGDIEGLIDKVT 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL + +R++R+ARGSG REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRLVRVARGSGATQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
A + KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 421 AAVVKKMGGIKGLFKSGD---LTKNVNPAQMAK-LNQQMAKMI 459
>gi|386697419|gb|AFJ22170.1| signal recognition particle protein 54k, partial [Micralges sp. B
PBK-2011]
Length = 464
Score = 550 bits (1417), Expect = e-154, Method: Compositional matrix adjust.
Identities = 267/454 (58%), Positives = 351/454 (77%), Gaps = 9/454 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL E L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLEELLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKAWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LV++VMD+SIGQA QA+AFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVVYVMDASIGQACEAQARAFKNKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL+ KL G FT+R MYEQ NI+KMGP Q+ +M+PGF ++L E E
Sbjct: 302 E-LKLDDNEELIAKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGADLAKCATEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL + +RI+R+ARGSG REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVARGSGVTQREVHELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 459
+ + KM G+K + K G+ L++N+N M+K+
Sbjct: 421 SAVVKKMGGIKGLFKSGD---LAKNVNPAQMAKL 451
>gi|386697439|gb|AFJ22180.1| signal recognition particle protein 54k, partial [Analges sp. n.
AD766]
Length = 464
Score = 550 bits (1416), Expect = e-154, Method: Compositional matrix adjust.
Identities = 270/462 (58%), Positives = 354/462 (76%), Gaps = 8/462 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG + P+K + +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKVWQPQKNRTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGV+ F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVDKFTKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LVI+VMD+SIGQA QA+AFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVIYVMDASIGQACEAQARAFKNKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCATEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL + +RI+R+ARG+G REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVARGAGVAQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
A + KM G+K KG L++N+N M+K L Q M + I
Sbjct: 421 AAVVKKMGGIKGLFKG--GDLTKNVNPAQMAK-LNQQMARMI 459
>gi|194866950|ref|XP_001971975.1| GG15264 [Drosophila erecta]
gi|190653758|gb|EDV51001.1| GG15264 [Drosophila erecta]
Length = 508
Score = 550 bits (1416), Expect = e-154, Method: Compositional matrix adjust.
Identities = 278/490 (56%), Positives = 376/490 (76%), Gaps = 16/490 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A+ +S AT+I+E+ LN L EI ALL+ADV +LV++++ N++ ++
Sbjct: 1 MVLADLGRKITTALHSLSKATVINEEALNSMLKEICAALLEADVNIRLVKQLRENVRAVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ D++A G NKRR+IQ A+F EL K++DPG + P KGK +V+MFVGLQGSGKTTTCTK
Sbjct: 61 DFDEMAGGLNKRRMIQSAVFKELVKLVDPGVKPYQPIKGKANVVMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++QK+ WK LVCADTFRAGA+DQ+KQNATKA+IPFYGSYTE DPV IA EGV+ FK
Sbjct: 121 LAYHYQKRNWKSCLVCADTFRAGAYDQVKQNATKARIPFYGSYTEIDPVVIAQEGVDMFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
+E ++IIVDTSGRHKQE +LFEEM VS A V+PD +IFVMD++IGQA QA+AFK
Sbjct: 181 REGFEMIIVDTSGRHKQEESLFEEMLAVSNA-VSPDNIIFVMDATIGQACEAQAKAFKDK 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V +G+VI+TK+DGHAKGGGALSAVAAT+SP+IFIGTGEH+D+ E F KPFVS+LLGMGD
Sbjct: 240 VDIGSVIITKLDGHAKGGGALSAVAATQSPIIFIGTGEHIDDLEPFKTKPFVSKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G +DK++E + +D ELL+K+ G+FT+R MYEQFQNI+KMGP Q +M+PGFS +
Sbjct: 300 IEGLIDKVNE-LKLDGNEELLEKIKHGHFTIRDMYEQFQNIMKMGPFSQFMNMIPGFSQD 358
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMN--DSRIMRIARGSGRQVREVM 417
M KG E+ES A++KR MTMMDSM++ ELD+ + KL + +R +R+A+G+G REV
Sbjct: 359 FMTKGGEQESMARVKRMMTMMDSMSDNELDNRDGAKLFSKQTNRCVRVAQGAGVMEREVK 418
Query: 418 EMLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNA-------QHMSKVLPQGMLKQIG 469
E++ Y + + + KM G+K + K+G+M ++N+N Q ++K++ ML+Q+G
Sbjct: 419 ELIAHYTKFSAVVKKMGGVKGLFKQGDM---TKNVNPTQMAKLNQQIAKMIDPRMLQQMG 475
Query: 470 GVGGLQNLMK 479
GVGG+QN+M+
Sbjct: 476 GVGGIQNMMR 485
>gi|386697463|gb|AFJ22192.1| signal recognition particle protein 54k, partial [Mesalgoides sp.
n. AD773]
Length = 464
Score = 550 bits (1416), Expect = e-154, Method: Compositional matrix adjust.
Identities = 272/463 (58%), Positives = 355/463 (76%), Gaps = 10/463 (2%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII++++L+ L EI AL+++DV LV++++ N++++++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEILDGLLKEICTALIESDVNIMLVKQLRENVRRVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDP + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFQELVKLLDPEVKVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LVI+VMD+SIGQA QA+AFKQ V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVIYVMDASIGQACEGQAKAFKQKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PFVS+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVRPFVSKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL +R++R+ARGSG REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDSREGAKLFTKQPTRLVRVARGSGVSQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
A + KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 421 AAVVKKMGGIKGLFKSGD---LNKNVNPTQMAK-LNQQMAKMI 459
>gi|386697433|gb|AFJ22177.1| signal recognition particle protein 54k, partial [Analges sp. n.
AD555]
Length = 453
Score = 550 bits (1416), Expect = e-154, Method: Compositional matrix adjust.
Identities = 267/453 (58%), Positives = 350/453 (77%), Gaps = 7/453 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG + P+K + +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKVWQPQKNRTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGV+ F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVDKFTKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LVI+VMD+SIGQA QA+AFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVIYVMDASIGQACEAQARAFKNKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCATEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL + +RI+R+ARGSG REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVARGSGVAQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKV 459
A + KM G+K KG L++N+N M+K+
Sbjct: 421 AAVVKKMGGIKGLFKG--GDLTKNVNPAQMAKL 451
>gi|386697397|gb|AFJ22159.1| signal recognition particle protein 54k, partial [Caenolestocoptes
inca]
Length = 464
Score = 550 bits (1416), Expect = e-154, Method: Compositional matrix adjust.
Identities = 270/463 (58%), Positives = 354/463 (76%), Gaps = 10/463 (2%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII++ VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQDVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG + P KGK ++IMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKVWQPVKGKTNIIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LVI+VMD+SIGQA QA+AFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVIYVMDASIGQACEAQARAFKNKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL + +RI+R++RG+G RE+ E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIIRVSRGAGVTQREIQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
A + KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 421 AAVVKKMGGIKGLFKSGD---LAKNVNPAQMAK-LNQQMAKMI 459
>gi|386697659|gb|AFJ22290.1| signal recognition particle protein 54k, partial [Allodectes sp. A
PBK-2011]
gi|386697661|gb|AFJ22291.1| signal recognition particle protein 54k, partial [Allodectes sp.
AD1170]
Length = 464
Score = 550 bits (1416), Expect = e-154, Method: Compositional matrix adjust.
Identities = 268/454 (59%), Positives = 351/454 (77%), Gaps = 9/454 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ +KG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKVWQPIKGKTNVIMFVGLQGIGKTTTCTKMAYYYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LVI+VMD+SIGQA QA+AFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVIYVMDASIGQACEAQAKAFKNKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL + +RI+R++RGSG REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIIRVSRGSGVTQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 459
A + KM G+K + K G+ +++N+N M K+
Sbjct: 421 AAVVKKMGGIKGLFKTGD---IAKNVNPTQMLKL 451
>gi|386697665|gb|AFJ22293.1| signal recognition particle protein 54k, partial [Rhamphocaulus sp.
B PBK-2011]
Length = 464
Score = 550 bits (1416), Expect = e-154, Method: Compositional matrix adjust.
Identities = 267/454 (58%), Positives = 352/454 (77%), Gaps = 9/454 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ +KG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKAWQPIKGKTNVIMFVGLQGIGKTTTCTKMAYYYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LVI+VMD+SIGQA QA+AFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVIYVMDASIGQACEAQAKAFKNKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL + +RI+R++RG+G REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPARIIRVSRGAGVTQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 459
A + KM G+K + K G+ +++N+N M K+
Sbjct: 421 AAVVKKMGGIKGLFKTGD---IAKNVNPTQMLKL 451
>gi|386697353|gb|AFJ22137.1| signal recognition particle protein 54k, partial [Bdellorhynchus
sp. AD982]
Length = 463
Score = 550 bits (1416), Expect = e-154, Method: Compositional matrix adjust.
Identities = 270/461 (58%), Positives = 355/461 (77%), Gaps = 10/461 (2%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG ++ P KGK +V+MFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKAWQPVKGKTNVVMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGV+ F EN ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVDKFTNENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LVI+VMD+SIGQA QA+AFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVIYVMDASIGQACEAQARAFKNKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK+
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVS 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FT+R MYEQ NI+KMGP Q+ +MLPGF +EL E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMLPGFGAELAKCTSEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL + +RI+R+ARG+G REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVARGAGVTQREVQELLSQYSKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLK 466
+ + KM G+K + K G+ L++N+N+ M++ L Q M K
Sbjct: 421 SAVVKKMGGIKGLFKTGD---LTKNVNSNQMAQ-LNQQMAK 457
>gi|386697209|gb|AFJ22065.1| signal recognition particle protein 54k, partial [Lardoglyphus sp.
AD983]
Length = 464
Score = 550 bits (1416), Expect = e-154, Method: Compositional matrix adjust.
Identities = 271/463 (58%), Positives = 357/463 (77%), Gaps = 10/463 (2%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI +AL+++DV LV++++ N++ +++ +++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICKALIESDVNIMLVKKLRENVRSVIDFEEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F+EL K+LD G ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ +KG
Sbjct: 63 NKRRMIMMAVFSELGKLLDSGVKAWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGV+ F KEN ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVDKFTKENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM +S A V P+LV++VMD+SIGQA QA+AFK V VGA+I+T
Sbjct: 183 DTSGRHKQESSLFEEMLAIS-AAVQPNLVVYVMDASIGQACEAQAKAFKSKVDVGAIIIT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK+
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVS 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELSKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMN--DSRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL + +RI+R+ARG+G REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDSREGAKLFSKQTTRIVRVARGAGVTQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
A + KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 421 AAVVKKMGGIKGLFKTGD---LTKNVNPAQMAK-LNQQMAKMI 459
>gi|386697435|gb|AFJ22178.1| signal recognition particle protein 54k, partial [Analges spiniger]
Length = 464
Score = 550 bits (1416), Expect = e-154, Method: Compositional matrix adjust.
Identities = 270/462 (58%), Positives = 354/462 (76%), Gaps = 8/462 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG + P+K + +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKVWQPQKNRTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGV+ F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVDKFTKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LVI+VMD+SIGQA QA+AFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVIYVMDASIGQACEAQARAFKNKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCATEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL + +RI+R+ARG+G REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVARGAGVAQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
A + KM G+K KG L++N+N M+K L Q M + I
Sbjct: 421 AAVVKKMGGIKGLFKG--GDLTKNVNPAQMAK-LNQQMARMI 459
>gi|195491937|ref|XP_002093779.1| GE21487 [Drosophila yakuba]
gi|194179880|gb|EDW93491.1| GE21487 [Drosophila yakuba]
Length = 508
Score = 550 bits (1416), Expect = e-154, Method: Compositional matrix adjust.
Identities = 278/490 (56%), Positives = 376/490 (76%), Gaps = 16/490 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A+ +S AT+I+E+ LN L EI ALL+ADV +LV++++ N++ ++
Sbjct: 1 MVLADLGRKITTALHSLSKATVINEEALNSMLKEICAALLEADVNIRLVKQLRENVRAVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ D++A G NKRR+IQ A+F EL K++DPG + P KGK +V+MFVGLQGSGKTTTCTK
Sbjct: 61 DFDEMAGGLNKRRMIQSAVFKELVKLVDPGVKPYQPIKGKANVVMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++QK+ WK LVCADTFRAGA+DQ+KQNATKA+IPFYGSYTE DPV IA EGV+ FK
Sbjct: 121 LAYHYQKRNWKSCLVCADTFRAGAYDQVKQNATKARIPFYGSYTEIDPVVIAQEGVDMFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
+E ++IIVDTSGRHKQE +LFEEM VS A V+PD +IFVMD++IGQA QA+AFK
Sbjct: 181 REGFEMIIVDTSGRHKQEESLFEEMLAVSNA-VSPDNIIFVMDATIGQACEAQAKAFKDK 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V +G+VI+TK+DGHAKGGGALSAVAAT+SP+IFIGTGEH+D+ E F KPFVS+LLGMGD
Sbjct: 240 VDIGSVIITKLDGHAKGGGALSAVAATQSPIIFIGTGEHIDDLEPFKTKPFVSKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G +DK++E + +D ELL+K+ G+FT+R MYEQFQNI+KMGP Q +M+PGFS +
Sbjct: 300 IEGLIDKVNE-LKLDGNEELLEKIKHGHFTIRDMYEQFQNIMKMGPFSQFMNMIPGFSQD 358
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMN--DSRIMRIARGSGRQVREVM 417
M KG E+ES A++KR MTMMDSM++ ELD+ + KL + +R +R+A+G+G REV
Sbjct: 359 FMTKGGEQESMARVKRMMTMMDSMSDNELDNRDGAKLFSKQTNRCVRVAQGAGVMEREVK 418
Query: 418 EMLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNA-------QHMSKVLPQGMLKQIG 469
E++ Y + + + KM G+K + K+G+M ++N+N Q ++K++ ML+Q+G
Sbjct: 419 ELIAHYTKFSAVVKKMGGVKGLFKQGDM---TKNVNPTQMAKLNQQIAKMIDPRMLQQMG 475
Query: 470 GVGGLQNLMK 479
GVGG+QN+M+
Sbjct: 476 GVGGIQNMMR 485
>gi|386697351|gb|AFJ22136.1| signal recognition particle protein 54k, partial [Bdellorhynchus
oxyurae]
Length = 460
Score = 549 bits (1415), Expect = e-153, Method: Compositional matrix adjust.
Identities = 270/458 (58%), Positives = 353/458 (77%), Gaps = 10/458 (2%)
Query: 13 AIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKR 72
A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG NKR
Sbjct: 2 ALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGLNKR 61
Query: 73 RIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKP 132
R+I A+F EL K+LDPG ++ P KGK +V+MFVGLQG GKTTTCTK AYY+ KKGWK
Sbjct: 62 RMIMMAVFKELVKLLDPGVKAWQPMKGKTNVVMFVGLQGIGKTTTCTKMAYYYMKKGWKC 121
Query: 133 ALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTS 192
ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN ++IIVDTS
Sbjct: 122 ALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIIIVDTS 181
Query: 193 GRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMD 252
GRHKQE++LFEEM + +A + P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK+D
Sbjct: 182 GRHKQESSLFEEMLAI-QAAIQPNLVIYVMDASIGQACEAQARAFKNKVDVGAIIVTKLD 240
Query: 253 GHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVV 312
GHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK+ E +
Sbjct: 241 GHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVSE-L 299
Query: 313 PMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQA 372
+D EL++KL G FT+R MYEQ NI+KMGP Q+ +MLPGF +EL E ES +
Sbjct: 300 KLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMLPGFGAELAKCTSEAESMS 359
Query: 373 KIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKI 429
++KR MT+MDSM++ ELDS KL + +RI+R+ARG+G REV E+L +Y + + +
Sbjct: 360 RLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVARGAGVTQREVQELLSQYSKFSAV 419
Query: 430 WSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLK 466
KM G+K + K G+ L++N+N+ M++ L Q M K
Sbjct: 420 VKKMGGIKGLFKTGD---LTKNVNSNQMAQ-LNQQMAK 453
>gi|386697303|gb|AFJ22112.1| signal recognition particle protein 54k, partial [Chelomatolichus
sp. AD1166]
Length = 464
Score = 549 bits (1415), Expect = e-153, Method: Compositional matrix adjust.
Identities = 271/463 (58%), Positives = 355/463 (76%), Gaps = 10/463 (2%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKR++I A+F EL ++LDPG ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRKMIMTAVFKELVRLLDPGVKAWQPIKGKTNVIMFVGLQGIGKTTTCTKMAYYYLKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKANIPFYGSYTESDPVVIASEGVEKFTDENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A V P+LV++VMD+SIGQA QA+AFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAVQPNLVVYVMDASIGQACEAQARAFKNKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVRPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL + +RI+R+ARGSG REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIIRVARGSGVTQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
A + KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 421 AAVVKKMGGIKGLFKSGD---LTKNVNPAQMAK-LNQQMAKMI 459
>gi|386697183|gb|AFJ22052.1| signal recognition particle protein 54k, partial [Chortoglyphus
sciuricola]
Length = 464
Score = 549 bits (1415), Expect = e-153, Method: Compositional matrix adjust.
Identities = 273/463 (58%), Positives = 355/463 (76%), Gaps = 10/463 (2%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ AI+ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTAIRSLGNATIINQEVLDNMLKEICAALIESDVNIILVKKLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG ++TP KGK +VIMFVGLQG GKTTTCTK AY++ +KG
Sbjct: 63 NKRRMIMMAVFQELVKLLDPGVKAWTPVKGKTNVIMFVGLQGIGKTTTCTKMAYHYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM +S A V P+L+++VMD+SIGQA QA+AFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAIS-AAVQPNLIVYVMDASIGQACEAQARAFKSKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FTLR MYEQ NI+KMGP Q +M+PGF +EL E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTLRDMYEQLTNIMKMGPFNQFLNMIPGFGAELAKGTSEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM + ELDS K + +RI+R+ARGSG REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMADCELDSREGAKFFSKQPTRIVRVARGSGVTQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
A++ KM G+K + K G+ LS+N+N M++ L Q M + I
Sbjct: 421 AQVVKKMGGIKGLFKSGD---LSKNVNPAQMAR-LNQQMARMI 459
>gi|386697377|gb|AFJ22149.1| signal recognition particle protein 54k, partial [Scutulanyssus
subis]
Length = 464
Score = 549 bits (1415), Expect = e-153, Method: Compositional matrix adjust.
Identities = 274/463 (59%), Positives = 355/463 (76%), Gaps = 10/463 (2%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII++ VL+ L EI AL+++DV KLV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQDVLDSLLKEICTALIESDVNIKLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRRII + +F EL K+LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRIIMEGVFKELVKLLDPGVKIWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
+K ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN ++IIV
Sbjct: 123 FKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LVI+VMD+SIGQA QAQAFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVIYVMDASIGQACEAQAQAFKNKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PFVS++LGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFRVQPFVSKMLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL+ KL G FT+R MYEQ NI+KMGP Q+ +M+PGF ++L E E
Sbjct: 302 E-LKLDDNEELIGKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGADLAKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELD+ KL + +RI+R+ARGSG REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDAREGAKLFSKQPTRIVRVARGSGVTQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
A + KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 421 AAVVKKMGGIKGLFKSGD---LAKNVNPAQMAK-LNQQMAKMI 459
>gi|386697085|gb|AFJ22003.1| signal recognition particle protein 54k, partial [Haplochthonius
simplex]
Length = 464
Score = 549 bits (1415), Expect = e-153, Method: Compositional matrix adjust.
Identities = 269/461 (58%), Positives = 356/461 (77%), Gaps = 10/461 (2%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII++ VL+ L E+ ALL++DV KLV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINKDVLDGLLKELCTALLESDVNIKLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+IQ A+F EL K++DPG S+ P KG+P+++MFVGLQGSGKTTTCTK AYY+ +KG
Sbjct: 63 NKRRMIQMAVFKELVKLVDPGVKSWQPVKGRPNIVMFVGLQGSGKTTTCTKMAYYYVRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK AL+CADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F E ++IIV
Sbjct: 123 WKCALICADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFVNEGFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM +S +V P+L+I+VMD+SIGQA QA+AFK V VGAVI+T
Sbjct: 183 DTSGRHKQESSLFEEMLAISN-SVEPNLIIYVMDASIGQACEAQARAFKSKVDVGAVIIT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHA+GGGALSAVAAT+SP+IFIGTGEH+D+FE F VKPFVS+LLGMGD G +DK++
Sbjct: 242 KLDGHARGGGALSAVAATQSPIIFIGTGEHIDDFEQFKVKPFVSKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FTLR MYEQF NI+KMGP Q+ +M+PGF ++L+ E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTLRDMYEQFTNIMKMGPFNQILNMIPGFGADLIKGASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMNDS--RIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL + RI R+ARGSG +EV E+L +Y +
Sbjct: 361 SMSRLKRLMTIMDSMSDSELDSREGAKLFSKQPLRIQRVARGSGVTQKEVQELLTQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLK 466
A + KM G+K + K G+ + +N+N M+K L Q M K
Sbjct: 421 AAVVKKMGGIKGLFKSGD---IGKNVNPAQMAK-LNQQMAK 457
>gi|386697271|gb|AFJ22096.1| signal recognition particle protein 54k, partial [Freyana
largifolia]
Length = 464
Score = 549 bits (1415), Expect = e-153, Method: Compositional matrix adjust.
Identities = 269/463 (58%), Positives = 356/463 (76%), Gaps = 10/463 (2%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKR++I A+F EL ++LDPG ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ +KG
Sbjct: 63 NKRKMIMTAVFKELVRLLDPGVKAWQPAKGKTNVIMFVGLQGIGKTTTCTKMAYYYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LV++VMD+SIGQA QA+AFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVVYVMDASIGQACESQARAFKNKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVRPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++K MT+MDSM++ ELDS KL + +RI+R+ARGSG REV E+L +Y +
Sbjct: 361 SMSRLKCMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVARGSGVTQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
A + KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 421 AAVVKKMGGIKGLFKSGD---LAKNVNPAQMAK-LNQQMAKMI 459
>gi|386697261|gb|AFJ22091.1| signal recognition particle protein 54k, partial [Kramerella oti]
Length = 464
Score = 549 bits (1415), Expect = e-153, Method: Compositional matrix adjust.
Identities = 268/462 (58%), Positives = 354/462 (76%), Gaps = 8/462 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKR++I A+F EL ++LDPG ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRKMIMTAVFKELVRLLDPGVKAWQPAKGKTNVIMFVGLQGIGKTTTCTKMAYYYLKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LV++VMD+SIGQA QA+AFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVVYVMDASIGQACESQARAFKNKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVRPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + ++ EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLEDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL + +RI+R++RGSG REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIIRVSRGSGVTQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
A + KM G+K KG L++N+N M+K L Q M K I
Sbjct: 421 AAVVKKMGGIKGLFKG--GDLTKNVNPAQMAK-LNQQMAKMI 459
>gi|386697119|gb|AFJ22020.1| signal recognition particle protein 54k, partial [Histiostomatidae
gen. sp. AD655]
Length = 464
Score = 549 bits (1415), Expect = e-153, Method: Compositional matrix adjust.
Identities = 270/454 (59%), Positives = 352/454 (77%), Gaps = 9/454 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ AI+ + NAT+I+++VL+ L EI ALL+ADV LV++++ N++ +++ D++AAG
Sbjct: 3 ITSAIKSLGNATVINQEVLDNMLKEICAALLEADVNILLVKKLRENVRNVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F ELCK+LDPG + P KG+P+V+MFVGLQG GKTTT TK AY++ KKG
Sbjct: 63 NKRRMIMMAVFQELCKLLDPGVKQWQPVKGRPNVVMFVGLQGIGKTTTVTKLAYHYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA +GV F KEN ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVIIAADGVTKFAKENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE +LFEEM + AT +PDLV++VMD+SIGQA QA+AFK V +GA+IVT
Sbjct: 183 DTSGRHKQENSLFEEMLAIQAAT-SPDLVVYVMDASIGQACEAQAKAFKSKVDIGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + ++ EL++KL G FTLR MYEQ NI+KMGP Q+ +M+PGF EL E E
Sbjct: 302 E-LKLEDNEELIEKLKHGEFTLRDMYEQLTNIMKMGPFNQILNMIPGFGPELSKCTSEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMN--DSRIMRIARGSGRQVREVMEMLEEYKRL 426
S A++KR MT+MDSM++ ELDS KL N +RI+R+ARG+G REV E+L +Y +
Sbjct: 361 SAARLKRMMTIMDSMSDNELDSREGAKLFNRQPNRIVRVARGAGVFRREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 459
A++ KM G+K + K+G+ L++N+N M+K+
Sbjct: 421 AQMVKKMGGMKGLFKQGD---LTKNVNPMQMAKL 451
>gi|225714310|gb|ACO13001.1| Signal recognition particle 54 kDa protein [Lepeophtheirus
salmonis]
Length = 508
Score = 549 bits (1415), Expect = e-153, Method: Compositional matrix adjust.
Identities = 273/487 (56%), Positives = 363/487 (74%), Gaps = 15/487 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A+ +S ATI+DE+VLN L E+ ALL+ADV +LV +++ N++ ++
Sbjct: 1 MVLADLGRKINNALNSLSKATIVDEEVLNGMLKELCAALLEADVNIRLVAKLRENVRGVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N +++A G NKR+II++A++ EL K++DPG +TPKKGK +V+MFVGLQGSGKTTTCTK
Sbjct: 61 NFEEMAQGLNKRQIIKEAVYLELVKLVDPGVEPYTPKKGKSNVVMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A+Y+QKKGWK LVCADTFRAGA+DQLKQNATKA+IPFYGSYTE DPV IA EGV FK
Sbjct: 121 LAWYYQKKGWKACLVCADTFRAGAYDQLKQNATKARIPFYGSYTEPDPVVIANEGVNMFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
+E ++IIVDTSGRH QE ALFEEM VS A VNPD +IFVMD+SIGQA QA+AFK+
Sbjct: 181 EEGFEIIIVDTSGRHYQEDALFEEMLAVSNA-VNPDNIIFVMDASIGQACEAQARAFKEK 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V VG+VI +K+D HAKGGGALSAVAATKSPV+FIGTGEH+D+FE F KPFV +LLGMGD
Sbjct: 240 VDVGSVITSKLDSHAKGGGALSAVAATKSPVVFIGTGEHIDDFEPFKTKPFVQKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G + K+ E + +L+ K+ G +T+R MYEQF N++KMGP Q+ SM+PGFS
Sbjct: 300 IVGLIKKVEE-CNFENNEDLINKIKHGEYTIRDMYEQFLNVMKMGPFSQILSMVPGFSQS 358
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLM--NDSRIMRIARGSGRQVREVME 418
M KG E++SQA++K+ +T+MDSM +ELD K+ +R+ RIA G+G +V E
Sbjct: 359 FMAKGSEQQSQARLKKMITIMDSMNEKELDDRGAKIFIKEPTRVTRIAGGAGVYEGDVQE 418
Query: 419 MLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNAQHM-------SKVLPQGMLKQIGG 470
+L++Y++ ++ KM G+K + + G+M S+N+N Q M +K++ +L+QIGG
Sbjct: 419 LLKQYRQFEQVVKKMGGIKGLFRGGDM---SKNVNPQQMAQLNNQIAKMMDPSVLRQIGG 475
Query: 471 VGGLQNL 477
GLQN+
Sbjct: 476 PNGLQNM 482
>gi|386697671|gb|AFJ22296.1| signal recognition particle protein 54k, partial [Afrolistrophorus
congoicola]
Length = 464
Score = 549 bits (1414), Expect = e-153, Method: Compositional matrix adjust.
Identities = 271/463 (58%), Positives = 354/463 (76%), Gaps = 10/463 (2%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV KLV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLREICTALIESDVNIKLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I ++F EL K+LDPG + P KG+ +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIVMSVFKELVKLLDPGVKVWQPVKGRTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
W ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WXCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFSNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LVI+VMD+SIGQA QA+AFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVIYVMDASIGQACEAQAKAFKDKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF EL E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGPELAKCASETE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL + +RI+R++RGSG REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIIRVSRGSGVTQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
A + KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 421 AAVVKKMGGIKGLFKSGD---LTKNVNPAQMAK-LNQQMAKMI 459
>gi|386697461|gb|AFJ22191.1| signal recognition particle protein 54k, partial [Mesalgoides sp.
n. AD601]
Length = 453
Score = 549 bits (1414), Expect = e-153, Method: Compositional matrix adjust.
Identities = 267/454 (58%), Positives = 352/454 (77%), Gaps = 9/454 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII++++L+ L EI AL+++DV LV++++ N++++++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEILDGLLKEICTALIESDVNIMLVKQLRENVRRVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDP + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFQELVKLLDPEVKVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LVI+VMD+SIGQA QA+AFKQ V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVIYVMDASIGQACEAQAKAFKQKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PFVS+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVRPFVSKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL + +R++R+ARGSG REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRLVRVARGSGVSQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 459
A + KM G+K + K G+ L++N+N M+K+
Sbjct: 421 AAVVKKMGGIKGLFKSGD---LTKNVNPAQMAKL 451
>gi|386697249|gb|AFJ22085.1| signal recognition particle protein 54k, partial [Heterocoptidae
gen. n. sp. AD552]
Length = 453
Score = 549 bits (1414), Expect = e-153, Method: Compositional matrix adjust.
Identities = 265/454 (58%), Positives = 352/454 (77%), Gaps = 9/454 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL ++LDPG ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMTAVFKELVRLLDPGVKAWQPIKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK +LVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCSLVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFANENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LV++VMD+SIGQA QA+AFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVVYVMDASIGQACETQARAFKNKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D ELL+KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLDDNEELLEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL + +RI+R+++GSG REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVSKGSGVTQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 459
A + KM G+K + K G+ L++N+N M+K+
Sbjct: 421 AAVVKKMGGIKGLFKSGD---LTKNVNPAQMAKL 451
>gi|386697389|gb|AFJ22155.1| signal recognition particle protein 54k, partial [Ptyssalgidae gen.
n. sp. AD1153]
Length = 464
Score = 549 bits (1414), Expect = e-153, Method: Compositional matrix adjust.
Identities = 275/463 (59%), Positives = 355/463 (76%), Gaps = 10/463 (2%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII++ VL+ L EI AL+++DV KLV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQDVLDSLLKEICTALIESDVNIKLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRRII + +F EL K+LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRIIMERVFKELIKLLDPGVKVWQPIKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
+K ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN ++IIV
Sbjct: 123 FKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFIKENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LVI+VMD+SIGQA QAQAFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVIYVMDASIGQACEAQAQAFKDKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPFVS++LGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFRVKPFVSKMLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL+ KL G FT+R MYEQ NI+KMGP Q+ +M+PGF ++L E E
Sbjct: 302 E-LKLDDNEELIGKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGADLAKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELD+ KL + +RI+R+ARGSG REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDAELDAREGAKLFSKQPTRIVRVARGSGVTQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
A + KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 421 AAVVKKMGGIKGLFKSGD---LAKNVNPAQMAK-LNQQMAKMI 459
>gi|386697695|gb|AFJ22308.1| signal recognition particle protein 54k, partial [Olabidocarpus sp.
AD416]
Length = 464
Score = 549 bits (1414), Expect = e-153, Method: Compositional matrix adjust.
Identities = 271/463 (58%), Positives = 355/463 (76%), Gaps = 10/463 (2%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKAWQPFKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
W+ +LVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN ++IIV
Sbjct: 123 WRCSLVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + A + P+LVI+VMD+ IGQA QA+AFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAIQSA-IQPNLVIYVMDAPIGQACEAQAKAFKNKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL + +RI+R++RG+G REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIIRVSRGAGVTQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
A + KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 421 AAVVKKMGGIKGLFKSGD---LTKNVNPAQMAK-LNQQMAKMI 459
>gi|386697413|gb|AFJ22167.1| signal recognition particle protein 54k, partial [Metanalges sp.
AD900]
Length = 448
Score = 549 bits (1414), Expect = e-153, Method: Compositional matrix adjust.
Identities = 268/451 (59%), Positives = 351/451 (77%), Gaps = 9/451 (1%)
Query: 13 AIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKR 72
A++ + NATII+++VL+ L EI AL+Q+DV LV++++ N++ +++ D++AAG NKR
Sbjct: 2 ALRSLGNATIINQEVLDNLLKEICTALIQSDVNIMLVKQLRENVRSVIDFDEMAAGLNKR 61
Query: 73 RIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKP 132
R+I A+FNEL K+LDPG + P+KGK +VIMFVGLQG GKTTTCTK AYY+ KKGWK
Sbjct: 62 RMIMMAVFNELVKLLDPGVKVWQPQKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKGWKC 121
Query: 133 ALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTS 192
ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IVDTS
Sbjct: 122 ALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFIKENFEIVIVDTS 181
Query: 193 GRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMD 252
GRHKQE++LFEEM + +A + P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK+D
Sbjct: 182 GRHKQESSLFEEMLAI-QAAIQPNLVIYVMDASIGQACEAQARAFKNKVDVGAIIVTKLD 240
Query: 253 GHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVV 312
GHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E +
Sbjct: 241 GHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVNE-L 299
Query: 313 PMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQA 372
+D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES +
Sbjct: 300 KLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAESMS 359
Query: 373 KIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKI 429
++KR MT+MDSM++ ELDS KL + +RI+R++RG+G REV E+L +Y + A +
Sbjct: 360 RLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIIRVSRGAGVTQREVQELLIQYSKFAGV 419
Query: 430 WSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 459
KM G+K + K G+ ++N+N M+K+
Sbjct: 420 VKKMGGIKGLFKSGDP---AKNVNPAQMAKL 447
>gi|386697657|gb|AFJ22289.1| signal recognition particle protein 54k, partial [Toxerodectes sp.
A PBK-2011]
Length = 464
Score = 549 bits (1414), Expect = e-153, Method: Compositional matrix adjust.
Identities = 267/454 (58%), Positives = 351/454 (77%), Gaps = 9/454 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ +KG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKVWQPNKGKTNVIMFVGLQGIGKTTTCTKMAYYYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LVI+VMD+SIGQA QA+AFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVIYVMDASIGQACEAQAKAFKNKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL + +RI+R++RG+G REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVSRGAGVTQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 459
A + KM G+K + K G+ +++N+N M K+
Sbjct: 421 AAVVKKMGGIKGLFKTGD---IAKNVNPTQMLKL 451
>gi|386697573|gb|AFJ22247.1| signal recognition particle protein 54k, partial [Xolalgidae gen.
sp. AD1199]
Length = 464
Score = 549 bits (1414), Expect = e-153, Method: Compositional matrix adjust.
Identities = 271/463 (58%), Positives = 354/463 (76%), Gaps = 10/463 (2%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ AI+ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ +++AAG
Sbjct: 3 ITTAIRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFEEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F ELC +LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFQELCTLLDPGVKIWEPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LVI+VMD+SIGQA QA+AFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVIYVMDASIGQACEAQARAFKNKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PFVS+LLGMGD G ++K++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVRPFVSKLLGMGDIEGLINKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D +L++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLDDNEDLIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL + +RI R+A GSG REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIKRVANGSGVTQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
A + KM G+K + + G+ L++N+N+ M+K L Q M K I
Sbjct: 421 AAVVKKMGGIKGLFRSGD---LTKNVNSAQMAK-LNQQMAKMI 459
>gi|386697305|gb|AFJ22113.1| signal recognition particle protein 54k, partial [Aniacarus
mexicanus]
Length = 464
Score = 549 bits (1414), Expect = e-153, Method: Compositional matrix adjust.
Identities = 270/463 (58%), Positives = 359/463 (77%), Gaps = 10/463 (2%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI+ AL+++DV KLV++++ N++ +++ D++AAG
Sbjct: 3 INTALRSLGNATIINQEVLDNLLKEISMALMESDVNIKLVKQLRDNVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKR++I A++ EL ++LDPG ++ P KGK +V+MFVGLQG GKTTT TK AYY+ KKG
Sbjct: 63 NKRKMIMTAVYKELMRLLDPGVKAWQPVKGKTNVVMFVGLQGIGKTTTVTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LV++VMD+SIGQA QA+AFK+ V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVVYVMDASIGQACESQARAFKEKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PFVS+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFRVRPFVSKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF ++L E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGADLAKCTSEHE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL + +RI+R+ARGSG REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVARGSGVTQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
A + KM G+K + K G+ LS+N+N+ M+K L Q M K I
Sbjct: 421 AAVVKKMGGIKGLFKTGD---LSKNVNSVQMAK-LNQQMAKMI 459
>gi|386697697|gb|AFJ22309.1| signal recognition particle protein 54k, partial [Yunkeracarus
hylomyscus]
Length = 453
Score = 549 bits (1414), Expect = e-153, Method: Compositional matrix adjust.
Identities = 266/454 (58%), Positives = 352/454 (77%), Gaps = 9/454 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRTVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ +KG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK +LVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IV
Sbjct: 123 WKCSLVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LVI+VMD+SIGQA QA+AFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVIYVMDASIGQACEAQARAFKNKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEVE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL + +RI+R++RG+G REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVSRGAGVTQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 459
A + KM G+K + K G+ L++N+N M+K+
Sbjct: 421 AAVVKKMGGIKGLFKSGD---LAKNVNPAQMAKL 451
>gi|386697579|gb|AFJ22250.1| signal recognition particle protein 54k, partial [Proctophyllodes
sp. n. AD638]
Length = 453
Score = 549 bits (1414), Expect = e-153, Method: Compositional matrix adjust.
Identities = 267/454 (58%), Positives = 351/454 (77%), Gaps = 9/454 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NA II+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNAAIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LVI+VMD+SIGQA QA+AFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVIYVMDASIGQACEAQAKAFKNKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL + +R++R++RG+G REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRLVRVSRGAGVTQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 459
A + KM G+K + K G+ L++N+N+ M K+
Sbjct: 421 AAVVKKMGGIKGLFKTGD---LAKNVNSAQMLKL 451
>gi|386697155|gb|AFJ22038.1| signal recognition particle protein 54k, partial [Hyadesia
curassaviensis]
Length = 453
Score = 549 bits (1414), Expect = e-153, Method: Compositional matrix adjust.
Identities = 265/454 (58%), Positives = 351/454 (77%), Gaps = 9/454 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ +KG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKAWQPIKGKTNVIMFVGLQGIGKTTTCTKMAYYYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK +LVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCSLVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM +S A + P+L+++VMD+SIGQA QA+AFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAIS-AAIQPNLIVYVMDASIGQACESQAKAFKSKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FTLR MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTLRDMYEQLTNIMKMGPFNQILNMIPGFGAELSKCTSEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL + +RI R+A+G+G REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIARVAKGAGVTQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 459
A + KM G+K + K G+ L++N+N M+K+
Sbjct: 421 AAVVKKMGGIKGLFKSGD---LTKNVNPNQMAKL 451
>gi|386697431|gb|AFJ22176.1| signal recognition particle protein 54k, partial [Analges sp. n.
AD543]
Length = 464
Score = 548 bits (1413), Expect = e-153, Method: Compositional matrix adjust.
Identities = 270/462 (58%), Positives = 353/462 (76%), Gaps = 8/462 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG + P+K + +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFQELVKLLDPGVKVWQPQKNRTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGV+ F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVDKFTKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LVI+VMD+SIGQA QA+AFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVIYVMDASIGQACEAQARAFKNKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCATEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLM--NDSRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL +RI+R+ARG+G REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDSREGAKLFFKQPTRIVRVARGAGVAQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
A + KM G+K KG L++N+N M+K L Q M + I
Sbjct: 421 AAVVKKMGGIKGLFKG--GDLTKNVNPAQMAK-LNQQMARMI 459
>gi|386697445|gb|AFJ22183.1| signal recognition particle protein 54k, partial [Temnalges sp.
AD903]
Length = 464
Score = 548 bits (1413), Expect = e-153, Method: Compositional matrix adjust.
Identities = 270/463 (58%), Positives = 357/463 (77%), Gaps = 10/463 (2%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII++++L+ L EI AL+++DV LV++++ N++++++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEILDGLLKEICTALIESDVNIMLVKQLRENVRRVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDP + P KG+ +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFQELVKLLDPEVKVWQPIKGRTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE FK EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFKNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LVI+VMD+SIGQA QA+AFK+ V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVIYVMDASIGQACEAQAKAFKEKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PFVS+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVRPFVSKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL + +R++R+ARG+G REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRMVRVARGAGVTQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
A + KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 421 AAVVKKMGGIKGLFKSGD---LTKNVNPAQMAK-LNQQMAKMI 459
>gi|386697207|gb|AFJ22064.1| signal recognition particle protein 54k, partial [Acaridae gen. n.
sp. n. AD469]
Length = 463
Score = 548 bits (1413), Expect = e-153, Method: Compositional matrix adjust.
Identities = 270/463 (58%), Positives = 356/463 (76%), Gaps = 10/463 (2%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ AI+ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 2 ITTAIRSLGNATIINQEVLDNMLKEICAALIESDVNIILVKQLRENVRSVIDFDEMAAGL 61
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG ++ P KGK +VIMFVGLQG GKTTTCTK AY++ +KG
Sbjct: 62 NKRRMIMMAVFKELVKLLDPGVKAWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYHYMRKG 121
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGV+ F EN +++IV
Sbjct: 122 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVDKFTNENFEIVIV 181
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM +S A V P+L+++VMD+SIGQA QA+AFK V VGA+IVT
Sbjct: 182 DTSGRHKQESSLFEEMLAIS-AAVQPNLIVYVMDASIGQACEAQARAFKSKVDVGAIIVT 240
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++
Sbjct: 241 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVN 300
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FTLR MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 301 E-LKLDDNEELIEKLKHGEFTLRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKGTSEAE 359
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM + ELDS KL + +RI+R+ARGSG REV ++L +Y +
Sbjct: 360 SMSRLKRMMTIMDSMADSELDSREGAKLFSKQPTRIVRVARGSGVTQREVQDLLSQYTKF 419
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
A++ KM G+K + K G+ L++N+N M++ L Q M + I
Sbjct: 420 AQVVKKMGGIKGLFKSGD---LAKNVNPAQMAR-LNQQMARMI 458
>gi|124809679|ref|XP_001348651.1| signal recognition particle SRP54, putative [Plasmodium falciparum
3D7]
gi|23497549|gb|AAN37090.1| signal recognition particle SRP54, putative [Plasmodium falciparum
3D7]
gi|326787503|gb|AEA07718.1| signal recognition particle 54 [Plasmodium falciparum]
Length = 500
Score = 548 bits (1413), Expect = e-153, Method: Compositional matrix adjust.
Identities = 266/490 (54%), Positives = 364/490 (74%), Gaps = 8/490 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL +LG I+ A +++ +T+ D+ V+ ECL EI RAL+ +D+ ++++++NIK +
Sbjct: 1 MVLTELGTQITNAFRKLQTSTLADDVVIEECLKEIIRALILSDINVSYLKDIKSNIKNNI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ G+NK++++Q+ + EL K+L+ K + P KGK +VI+FVGLQGSGKTTTCTK
Sbjct: 61 EKNIDIYGNNKKKLVQKYVVEELIKLLEGKKEGYNPVKGKRNVILFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YA+Y+QKKG+K ALVCADTFRAGAFDQLKQNA K KIPFYGSY+E DPV+IA +GV F
Sbjct: 121 YAHYYQKKGFKTALVCADTFRAGAFDQLKQNAAKVKIPFYGSYSEVDPVKIATDGVNAFL 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
K+ DLIIVD+SGRHKQE LFEEM QV E ++ P+ +IFV+DS IGQ+ DQA AFK S
Sbjct: 181 KDKYDLIIVDSSGRHKQENELFEEMIQV-ENSIQPEEIIFVIDSHIGQSCHDQAMAFKNS 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
VS+G++I+TK+DGHAKGGGALSAVAAT P+ FIGTGEH+++FE F+ K FVSRLLG+GD
Sbjct: 240 VSLGSIIITKIDGHAKGGGALSAVAATGCPITFIGTGEHVNDFEKFEAKSFVSRLLGLGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
SG + I EV+ +D+QPEL+ +LS+G F LR MY+QFQN+ KMG + +V SM+PGF +
Sbjct: 300 ISGLVSTIKEVIDIDKQPELMNRLSKGKFVLRDMYDQFQNVFKMGSLSKVMSMIPGFGNN 359
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEML 420
L+ KG EKE KIK++M +MDSMTNEELD P +NDSR +RI +GSG +++++ E+L
Sbjct: 360 LISKGTEKEGIDKIKKFMVIMDSMTNEELDCIKP--LNDSRCLRIVKGSGTRLQDIKELL 417
Query: 421 EEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSK---VLPQGMLKQIGGVGGLQNL 477
E++K L K+ KM L + ++ +S L RN Q MSK ++ MLKQ+GG + N+
Sbjct: 418 EQFKFLQKMVVKMGKLGL-RENNISNLMRN-QKQFMSKMNNIMDPNMLKQLGGANNMVNI 475
Query: 478 MKQMGSTKDM 487
+K+ D+
Sbjct: 476 LKEFTKMDDL 485
>gi|386697455|gb|AFJ22188.1| signal recognition particle protein 54k, partial [Picalgoides aff.
pteroglossorum AD1152]
Length = 464
Score = 548 bits (1412), Expect = e-153, Method: Compositional matrix adjust.
Identities = 270/463 (58%), Positives = 356/463 (76%), Gaps = 10/463 (2%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII++++L+ L EI AL+++DV LV++++ N++++++ +++AAG
Sbjct: 3 ITTALRSLGNATIINQEILDGLLKEICTALIESDVNIMLVKQLRENVRRVIDFEEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDP + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFQELVKLLDPEVKVWQPAKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LVI+VMD+SIGQA QA+AFKQ V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVIYVMDASIGQACEAQAKAFKQKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PFVS+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVRPFVSKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL + +R++R+ARG+G REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRLVRVARGAGVSQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
A + KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 421 AAVVKKMGGIKGLFKSGD---LTKNVNPAQMAK-LNQQMAKMI 459
>gi|386697557|gb|AFJ22239.1| signal recognition particle protein 54k, partial [Alloptes
crassipes]
Length = 459
Score = 548 bits (1412), Expect = e-153, Method: Compositional matrix adjust.
Identities = 269/460 (58%), Positives = 356/460 (77%), Gaps = 10/460 (2%)
Query: 13 AIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKR 72
A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ +++AAG NKR
Sbjct: 2 ALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFNEMAAGLNKR 61
Query: 73 RIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKP 132
R+I A+F EL K+LDPG ++ P KGK ++IMFVGLQG GKTTTCTK AYY+ KKGWK
Sbjct: 62 RMIMMAVFKELVKLLDPGVKAWQPVKGKTNIIMFVGLQGIGKTTTCTKMAYYYMKKGWKC 121
Query: 133 ALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTS 192
+LVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IVDTS
Sbjct: 122 SLVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIVIVDTS 181
Query: 193 GRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMD 252
GRHKQE++LFEEM + +A + P+LVI+VMD+SIGQA QA+AFK+ V VGA+IVTK+D
Sbjct: 182 GRHKQESSLFEEMLAI-QAAIQPNLVIYVMDASIGQACESQARAFKEKVDVGAIIVTKLD 240
Query: 253 GHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVV 312
GHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E +
Sbjct: 241 GHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVNE-L 299
Query: 313 PMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQA 372
+D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES +
Sbjct: 300 KLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAESMS 359
Query: 373 KIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKI 429
++KR MT+MDSM++ ELDS KL + +R++R+ARG+G REV E+L +Y + A +
Sbjct: 360 RLKRMMTIMDSMSDPELDSREGAKLFSKQPTRMVRVARGAGVTHREVQELLSQYTKFAAV 419
Query: 430 WSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 420 VKKMGGIKGLFKSGD---LAKNVNPAQMAK-LNQQMAKMI 455
>gi|386697357|gb|AFJ22139.1| signal recognition particle protein 54k, partial [Mouchetia nr.
indochinensis AD1135]
Length = 464
Score = 548 bits (1412), Expect = e-153, Method: Compositional matrix adjust.
Identities = 274/463 (59%), Positives = 354/463 (76%), Gaps = 10/463 (2%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII++ VL+ L EI AL+++DV KLV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQDVLDSLLKEICTALIESDVNIKLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRRII + +F EL K+LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRIIMEGVFKELVKLLDPGVKIWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
+K ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN ++IIV
Sbjct: 123 FKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEVIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LVI+VMD+SIGQA QAQAFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVIYVMDASIGQACEAQAQAFKNKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPFVS++LGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFRVKPFVSKMLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL+ KL G FT+R MYEQ NI+KMGP Q+ +M+PGF ++L E E
Sbjct: 302 E-LKLDDNEELIGKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGADLAKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELD+ K + +RI+R+ARGSG REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDAREGAKXFSKQPTRIVRVARGSGVTQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
A + KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 421 AAVVKKMGGIKGLFKSGD---LAKNVNPAQMAK-LNQQMAKMI 459
>gi|386697087|gb|AFJ22004.1| signal recognition particle protein 54k, partial [Cosmochthonius
lanatus]
Length = 464
Score = 548 bits (1412), Expect = e-153, Method: Compositional matrix adjust.
Identities = 269/461 (58%), Positives = 359/461 (77%), Gaps = 10/461 (2%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L +I ALL+ADV KLV++++ N++ +++ +++AAG
Sbjct: 3 ITTALRSLGNATIINKEVLDGLLKDICTALLEADVNIKLVKQLRENVRSVIDFEEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+IQ A+F EL K++DPG ++ P KG+ +++MFVGLQGSGKTTTCTK AYY+ +KG
Sbjct: 63 NKRRMIQMAVFKELVKLVDPGVKAWQPIKGRTNIVMFVGLQGSGKTTTCTKMAYYYVRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F E ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNEGFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM +S +V P+L+I+VMD+SIGQA QA+AFK V VGAVIVT
Sbjct: 183 DTSGRHKQESSLFEEMLAIS-TSVQPNLIIYVMDASIGQACEAQARAFKNKVDVGAVIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHA+GGGALSAVAAT+SP+IFIGTGEH+D+FE F VKPFVS+LLGMGD G +DK++
Sbjct: 242 KLDGHARGGGALSAVAATQSPIIFIGTGEHIDDFEQFKVKPFVSKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FTLR MYEQF NI+KMGP Q+ +M+PGF ++L+ E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTLRDMYEQFTNIMKMGPFNQILNMIPGFGADLIKGASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL + +RI+R+A+GSG +EV E+L +Y +
Sbjct: 361 SMSRLKRLMTIMDSMSDSELDSREGAKLFSKQPTRIIRVAKGSGVTQKEVQELLTQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLK 466
A + KM G+K + K G+M ++N+N M+K L Q M K
Sbjct: 421 AAVVKKMGGIKGLFKGGDM---AKNVNPAQMAK-LNQQMAK 457
>gi|386697637|gb|AFJ22279.1| signal recognition particle protein 54k, partial [Amerodectes sp.
1B PBK-2011]
Length = 464
Score = 548 bits (1412), Expect = e-153, Method: Compositional matrix adjust.
Identities = 267/454 (58%), Positives = 350/454 (77%), Gaps = 9/454 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I ++F EL K+LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ +KG
Sbjct: 63 NKRRMIMMSVFKELVKLLDPGVKVWQPIKGKTNVIMFVGLQGIGKTTTCTKMAYYYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LVI+VMD+SIGQA QA+AFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVIYVMDASIGQACEAQAKAFKNKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL + +RI+R+ARGSG REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVARGSGVTQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 459
A + +M G+K + K G+ + +N+N M K+
Sbjct: 421 AAVVKRMGGIKGLFKTGD---IGKNVNPAQMQKL 451
>gi|386697575|gb|AFJ22248.1| signal recognition particle protein 54k, partial [Xolalgidae gen.
sp. AD1204]
Length = 464
Score = 548 bits (1411), Expect = e-153, Method: Compositional matrix adjust.
Identities = 270/463 (58%), Positives = 354/463 (76%), Gaps = 10/463 (2%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ AI+ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ +++AAG
Sbjct: 3 ITTAIRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFEEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F ELC +LDPG + P KGK +V+MFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFQELCTLLDPGVKIWEPVKGKTNVVMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LVI+VMD+SIGQA QA+AFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVIYVMDASIGQACEAQARAFKNKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PFVS+LLGMGD G ++K++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVRPFVSKLLGMGDIEGLINKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D +L++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLDDNEDLIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL + +RI R+A GSG REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIKRVAYGSGVTQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
A + KM G+K + + G+ L++N+N+ M+K L Q M K I
Sbjct: 421 AAVVKKMGGIKGLFRSGD---LTKNVNSAQMAK-LNQQMAKMI 459
>gi|386697375|gb|AFJ22148.1| signal recognition particle protein 54k, partial [Pteroherpus sp.
AD615]
Length = 453
Score = 548 bits (1411), Expect = e-153, Method: Compositional matrix adjust.
Identities = 269/454 (59%), Positives = 351/454 (77%), Gaps = 9/454 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII++ VL+ L EI AL+++DV KLV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQDVLDSLLKEICMALIESDVNIKLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRRII + +F EL K+LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRIIMEGVFKELIKLLDPGVKVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
+K ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN ++IIV
Sbjct: 123 FKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LVI+VMD+SIGQA QAQAFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVIYVMDASIGQACEAQAQAFKDKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPFVS++LGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFRVKPFVSKMLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL+ KL G FT+R MYEQ NI+KMGP Q+ +M+PGF ++L E E
Sbjct: 302 E-LKLDDNEELIGKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGADLAKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELD+ KL + +RI+R+ARGSG REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDAELDAREGAKLFSKQPTRIVRVARGSGVTQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 459
A + KM G+K + + G+ L++N+N M+K+
Sbjct: 421 AAVVKKMGGIKGLFRSGD---LAKNVNPAQMAKL 451
>gi|195337623|ref|XP_002035428.1| GM14699 [Drosophila sechellia]
gi|194128521|gb|EDW50564.1| GM14699 [Drosophila sechellia]
Length = 508
Score = 548 bits (1411), Expect = e-153, Method: Compositional matrix adjust.
Identities = 277/490 (56%), Positives = 376/490 (76%), Gaps = 16/490 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A+ +S AT+I+E+ LN L EI ALL+ADV +LV++++ N++ ++
Sbjct: 1 MVLADLGRKITTALHSLSKATVINEEALNSMLKEICAALLEADVNIRLVKQLRENVRAVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ D++A G NKRR+IQ A+F EL K++DPG + P KGK +V+MFVGLQGSGKTTTCTK
Sbjct: 61 DFDEMAGGLNKRRMIQSAVFKELVKLVDPGVKPYQPIKGKANVVMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++QK+ WK LVCADTFRAGA+DQ+KQNATKA+IPFYGSYTE DPV IA +GV+ FK
Sbjct: 121 LAYHYQKRNWKSCLVCADTFRAGAYDQVKQNATKARIPFYGSYTEIDPVVIAQDGVDMFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
+E ++IIVDTSGRHKQE +LFEEM VS A V+PD +IFVMD++IGQA QA+AFK
Sbjct: 181 REGFEMIIVDTSGRHKQEESLFEEMLAVSNA-VSPDNIIFVMDATIGQACEAQAKAFKDK 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V +G+VI+TK+DGHAKGGGALSAVAAT+SP+IFIGTGEH+D+ E F KPFVS+LLGMGD
Sbjct: 240 VDIGSVIITKLDGHAKGGGALSAVAATQSPIIFIGTGEHIDDLEPFKTKPFVSKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G +DK++E + +D ELL+K+ G+FT+R MYEQFQNI+KMGP Q +M+PGFS +
Sbjct: 300 IEGLLDKVNE-LKLDGNDELLEKIKHGHFTIRDMYEQFQNIMKMGPFSQFMNMIPGFSQD 358
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQVREVM 417
M KG E+ES A++KR MTMMDSM++ ELD+ + KL + +R +R+A+G+G REV
Sbjct: 359 FMTKGGEQESMARVKRMMTMMDSMSDNELDNRDGAKLFSKQPNRCVRVAQGAGVMEREVK 418
Query: 418 EMLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNA-------QHMSKVLPQGMLKQIG 469
E++ Y + + + KM G+K + K+G+M ++N+N Q ++K++ ML+Q+G
Sbjct: 419 ELIAHYTKFSAVVKKMGGVKGLFKQGDM---TKNVNPTQMAKLNQQIAKMIDPRMLQQMG 475
Query: 470 GVGGLQNLMK 479
GVGG+QN+M+
Sbjct: 476 GVGGIQNMMR 485
>gi|386697425|gb|AFJ22173.1| signal recognition particle protein 54k, partial [Analges sp.
AD1022]
Length = 460
Score = 548 bits (1411), Expect = e-153, Method: Compositional matrix adjust.
Identities = 269/459 (58%), Positives = 352/459 (76%), Gaps = 8/459 (1%)
Query: 13 AIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKR 72
A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG NKR
Sbjct: 2 ALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGLNKR 61
Query: 73 RIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKP 132
R+I A+F EL K+LDPG + P+K + +VIMFVGLQG GKTTTCTK AYY+ KKGWK
Sbjct: 62 RMIMMAVFKELVKLLDPGVKVWQPQKNRTNVIMFVGLQGIGKTTTCTKMAYYYMKKGWKC 121
Query: 133 ALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTS 192
ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGV+ F KEN +++IVDTS
Sbjct: 122 ALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVDKFTKENFEIVIVDTS 181
Query: 193 GRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMD 252
GRHKQE++LFEEM + +A + P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK+D
Sbjct: 182 GRHKQESSLFEEMLAI-QAAIQPNLVIYVMDASIGQACEAQARAFKNKVDVGAIIVTKLD 240
Query: 253 GHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVV 312
GHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E +
Sbjct: 241 GHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE-L 299
Query: 313 PMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQA 372
+D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES +
Sbjct: 300 KLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCATEAESMS 359
Query: 373 KIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKI 429
++KR MT+MDSM++ ELDS KL + +RI+R+ARG+G REV E+L +Y + A +
Sbjct: 360 RLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIIRVARGAGVAQREVQELLSQYTKFAAV 419
Query: 430 WSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
KM G+K KG L++N+N M+K L Q M + I
Sbjct: 420 VKKMGGIKGLFKG--GDLTKNVNPAQMAK-LNQQMARMI 455
>gi|386697651|gb|AFJ22286.1| signal recognition particle protein 54k, partial [Amerodectes aff.
ocelatus AD1139]
Length = 463
Score = 548 bits (1411), Expect = e-153, Method: Compositional matrix adjust.
Identities = 267/454 (58%), Positives = 351/454 (77%), Gaps = 9/454 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDP + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPEVKVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LVI+VMD+SIGQA QA+AFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVIYVMDASIGQACEAQAKAFKNKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL + +R++R++RG+G REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRLIRVSRGAGVTQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 459
A + KM G+K + K G+ L++N+N+ M K+
Sbjct: 421 AAVVKKMGGIKGLFKTGD---LAKNVNSAQMLKL 451
>gi|17647949|ref|NP_523931.1| signal recognition particle protein 54k [Drosophila melanogaster]
gi|5679038|gb|AAD46831.1|AF160891_1 BcDNA.GM09489 [Drosophila melanogaster]
gi|7295492|gb|AAF50806.1| signal recognition particle protein 54k [Drosophila melanogaster]
gi|220952956|gb|ACL89021.1| Srp54k-PA [synthetic construct]
Length = 508
Score = 548 bits (1411), Expect = e-153, Method: Compositional matrix adjust.
Identities = 277/490 (56%), Positives = 376/490 (76%), Gaps = 16/490 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A+ +S AT+I+E+ LN L EI ALL+ADV +LV++++ N++ ++
Sbjct: 1 MVLADLGRKITTALHSLSKATVINEEALNSMLKEICAALLEADVNIRLVKQLRENVRAVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ D++A G NKRR+IQ A+F EL K++DPG + P KGK +V+MFVGLQGSGKTTTCTK
Sbjct: 61 DFDEMAGGLNKRRMIQSAVFKELVKLVDPGVKPYQPIKGKANVVMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++QK+ WK LVCADTFRAGA+DQ+KQNATKA+IPFYGSYTE DPV IA +GV+ FK
Sbjct: 121 LAYHYQKRNWKSCLVCADTFRAGAYDQVKQNATKARIPFYGSYTEIDPVVIAQDGVDMFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
+E ++IIVDTSGRHKQE +LFEEM VS A V+PD +IFVMD++IGQA QA+AFK
Sbjct: 181 REGFEMIIVDTSGRHKQEESLFEEMLAVSNA-VSPDNIIFVMDATIGQACEAQAKAFKDK 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V +G+VI+TK+DGHAKGGGALSAVAAT+SP+IFIGTGEH+D+ E F KPFVS+LLGMGD
Sbjct: 240 VDIGSVIITKLDGHAKGGGALSAVAATQSPIIFIGTGEHIDDLEPFKTKPFVSKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G +DK++E + +D ELL+K+ G+FT+R MYEQFQNI+KMGP Q +M+PGFS +
Sbjct: 300 IEGLIDKVNE-LKLDGNDELLEKIKHGHFTIRDMYEQFQNIMKMGPFSQFMNMIPGFSQD 358
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQVREVM 417
M KG E+ES A++KR MTMMDSM++ ELD+ + KL + +R +R+A+G+G REV
Sbjct: 359 FMTKGGEQESMARVKRMMTMMDSMSDNELDNRDGAKLFSKQPNRCVRVAQGAGVMEREVK 418
Query: 418 EMLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNA-------QHMSKVLPQGMLKQIG 469
E++ Y + + + KM G+K + K+G+M ++N+N Q ++K++ ML+Q+G
Sbjct: 419 ELIAHYTKFSAVVKKMGGVKGLFKQGDM---TKNVNPTQMAKLNQQIAKMIDPRMLQQMG 475
Query: 470 GVGGLQNLMK 479
GVGG+QN+M+
Sbjct: 476 GVGGIQNMMR 485
>gi|386697617|gb|AFJ22269.1| signal recognition particle protein 54k, partial [Proctophyllodinae
gen. sp. AD1237]
gi|386697627|gb|AFJ22274.1| signal recognition particle protein 54k, partial [Anisophyllodes
sp. AD1233]
gi|386697629|gb|AFJ22275.1| signal recognition particle protein 54k, partial [aff.
Anisophyllodes sp. AD1179]
Length = 464
Score = 548 bits (1411), Expect = e-153, Method: Compositional matrix adjust.
Identities = 267/454 (58%), Positives = 351/454 (77%), Gaps = 9/454 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDP + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPEVKVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LVI+VMD+SIGQA QA+AFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVIYVMDASIGQACEAQAKAFKNKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL + +R++R++RG+G REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRLIRVSRGAGVTQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 459
A + KM G+K + K G+ L++N+N+ M K+
Sbjct: 421 AAVVKKMGGIKGLFKTGD---LAKNVNSAQMLKL 451
>gi|386697247|gb|AFJ22084.1| signal recognition particle protein 54k, partial [Cerophagus
nearcticus]
Length = 464
Score = 548 bits (1411), Expect = e-153, Method: Compositional matrix adjust.
Identities = 268/462 (58%), Positives = 354/462 (76%), Gaps = 8/462 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ AI+ + NATII+++VL+ L EI ALL++DV LV++++ N++ +++ +++AAG
Sbjct: 3 ITTAIRSLGNATIINQEVLDNMLKEICAALLESDVNIMLVKQLRENVRSVIDFEEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG ++ P KG+ +VIMFVGLQG GKTTTCTK AY++ +KG
Sbjct: 63 NKRRMIMHAVFKELVKLLDPGVKAWQPTKGRTNVIMFVGLQGIGKTTTCTKMAYHYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
W+ ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WRCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM +S A + P+L+++VMD+SIGQA QA+AFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAIS-AAIQPNLIVYVMDASIGQACEAQAKAFKSKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEEFKVKPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FTLR MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTLRDMYEQLTNIMKMGPFNQILNMIPGFGAELSKCTSEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++K+ MT+MDSM + ELDS + KL + +R++RIARG+G REV E+L +Y +
Sbjct: 361 SMSRLKKMMTIMDSMADSELDSRDGAKLFSKQPTRVVRIARGAGVTQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
A + KM G+K KG L++N+N M+K L Q M + I
Sbjct: 421 AAVVKKMGGIKGLFKG--GDLTKNVNPAQMAK-LNQHMARMI 459
>gi|386697275|gb|AFJ22098.1| signal recognition particle protein 54k, partial [Freyana sp.
AD1003]
Length = 464
Score = 548 bits (1411), Expect = e-153, Method: Compositional matrix adjust.
Identities = 267/463 (57%), Positives = 356/463 (76%), Gaps = 10/463 (2%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKR++I A+F EL ++LDPG ++ P KGK ++IMFVGLQG GKTTTCTK AYY+ +KG
Sbjct: 63 NKRKMIMTAVFKELVRLLDPGVKAWQPAKGKTNIIMFVGLQGIGKTTTCTKMAYYYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LV++VMD+SIGQA QA+AFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVVYVMDASIGQACESQARAFKNKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAAT SP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATNSPIIFIGTGEHIDEFEPFKVRPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLDDNGELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++K+ MT+MDSM++ ELDS KL + +RI+R+ARGSG REV E+L +Y +
Sbjct: 361 SMSRLKQMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVARGSGVTQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
A + KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 421 AAVVKKMGGIKGLFKSGD---LAKNVNPAQMAK-LNQQMAKMI 459
>gi|386697683|gb|AFJ22302.1| signal recognition particle protein 54k, partial [Trichoecius sp.
n. AD367]
Length = 464
Score = 548 bits (1411), Expect = e-153, Method: Compositional matrix adjust.
Identities = 273/463 (58%), Positives = 351/463 (75%), Gaps = 10/463 (2%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ ++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFGEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKAWQPIKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE LFEEM + A V PDLVI+VMD+SIGQA QA+AFK V VGA+IVT
Sbjct: 183 DTSGRHKQENTLFEEMLAIQAAIV-PDLVIYVMDASIGQACEAQAKAFKNKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL + +RI+R++RG+G REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIIRVSRGAGVTQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
A + KM G+K + K G+ L +N+N M+K L Q M K I
Sbjct: 421 AAVVKKMGGIKGLFKSGD---LMKNVNPAQMAK-LNQQMAKMI 459
>gi|386697481|gb|AFJ22201.1| signal recognition particle protein 54k, partial [Schoutedenocoptes
aquilae]
Length = 453
Score = 548 bits (1411), Expect = e-153, Method: Compositional matrix adjust.
Identities = 264/454 (58%), Positives = 353/454 (77%), Gaps = 9/454 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++++++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDGLLKEICTALIESDVNIMLVKQLRENVRRVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG + P KGK ++IMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFQELVKLLDPGVKVWQPMKGKTNIIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
W+ ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IV
Sbjct: 123 WRCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFAKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LVI+VMD+SIGQA QA+AFK V +GA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVIYVMDASIGQACEAQARAFKLKVDIGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVRPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL + +RI+R++RG+G REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVSRGAGVTQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 459
A + KM G+K + K G+ L++N+N M+K+
Sbjct: 421 AAVVKKMGGIKGLFKSGD---LAKNVNPAQMAKL 451
>gi|386697369|gb|AFJ22145.1| signal recognition particle protein 54k, partial [Neopteronyssus
pici]
Length = 464
Score = 547 bits (1410), Expect = e-153, Method: Compositional matrix adjust.
Identities = 273/463 (58%), Positives = 355/463 (76%), Gaps = 10/463 (2%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII++ VL+ L EI AL+++DV KLV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQDVLDSLLKEICTALIESDVNIKLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRRII + +F EL K+LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRIIMEGVFKELIKLLDPGVKVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
+K ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGV+ F KEN ++IIV
Sbjct: 123 FKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVDKFTKENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LVI+VMD+SIGQA QAQAFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVIYVMDASIGQACEAQAQAFKDKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPFVS++LGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFRVKPFVSKMLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL+ KL G FT+R MYEQ NI+KMGP Q+ +M+PGF ++L E E
Sbjct: 302 E-LKLDDNEELIGKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGADLAKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELD+ KL + +RI+R+ARGSG REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDGELDAREGAKLFSKQPTRIVRVARGSGVTQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
A + KM G+K + K G+ L++N+N M+K L Q M + I
Sbjct: 421 AAVVKKMGGIKGLFKSGD---LAKNVNPTQMAK-LNQQMARMI 459
>gi|195014137|ref|XP_001983965.1| GH16182 [Drosophila grimshawi]
gi|193897447|gb|EDV96313.1| GH16182 [Drosophila grimshawi]
Length = 508
Score = 547 bits (1410), Expect = e-153, Method: Compositional matrix adjust.
Identities = 279/490 (56%), Positives = 375/490 (76%), Gaps = 16/490 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A+ +S AT+I+E+ L+ L EI ALL+ADV + V++++ N++ ++
Sbjct: 1 MVLADLGRKITTALHSLSKATVINEEALSAMLKEICAALLEADVNIRQVKQLRENVRAVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ D++A G NKRR+IQ A+F EL K++DPG + P KGK +VIMFVGLQGSGKTTTCTK
Sbjct: 61 DFDEMAGGLNKRRMIQSAVFKELIKLVDPGVKPYQPIKGKANVIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++QK+ WK LVCADTFRAGA+DQ+KQNATKA+IPFYGSYTE DPV IA EGV+ FK
Sbjct: 121 LAYHYQKRNWKSCLVCADTFRAGAYDQVKQNATKARIPFYGSYTEIDPVVIAQEGVDMFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
+E ++IIVDTSGRHKQE +LFEEM VS A V+PD +IFVMD++IGQA QA+AFK+
Sbjct: 181 REGFEMIIVDTSGRHKQEESLFEEMLAVSNA-VSPDNIIFVMDATIGQACEAQAKAFKEK 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V +G+VI+TK+DGHAKGGGALSAVAAT+SP+IFIGTGEH+D+ E F KPFVS+LLGMGD
Sbjct: 240 VDIGSVIITKLDGHAKGGGALSAVAATQSPIIFIGTGEHIDDLEPFKTKPFVSKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G +DK++E + +D EL++K+ G+FT+R MYEQFQNI+KMGP Q+ +M+PGFS +
Sbjct: 300 IEGLIDKVNE-LKLDGSEELMEKIKHGHFTIRDMYEQFQNIMKMGPFSQIMNMIPGFSQD 358
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQVREVM 417
M KG E+ES A+IKR MTMMDSM++ ELD+ + KL + +R +R+A G+G REV
Sbjct: 359 FMTKGGEQESMARIKRMMTMMDSMSDSELDNRDGAKLFSKQPTRCLRVAHGAGVIEREVK 418
Query: 418 EMLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNA-------QHMSKVLPQGMLKQIG 469
EM+ Y + A + KM G+K + K+G+ +++N+N Q M+K++ ML+Q+G
Sbjct: 419 EMIAHYTKFAAVVKKMGGVKGLFKQGD---IAKNVNPTQMAKLNQQMAKMIDPRMLQQMG 475
Query: 470 GVGGLQNLMK 479
GV GLQN+M+
Sbjct: 476 GVAGLQNMMR 485
>gi|195587932|ref|XP_002083715.1| GD13881 [Drosophila simulans]
gi|194195724|gb|EDX09300.1| GD13881 [Drosophila simulans]
Length = 508
Score = 547 bits (1410), Expect = e-153, Method: Compositional matrix adjust.
Identities = 277/490 (56%), Positives = 375/490 (76%), Gaps = 16/490 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A+ +S AT+I+E+ LN L EI ALL+ADV +LV++++ N++ ++
Sbjct: 1 MVLADLGRKITTALHSLSKATVINEEALNSMLKEICAALLEADVNIRLVKQLRENVRAVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ D++A G NKRR+IQ A+F EL K++DPG + P KGK +V+MFVGLQGSGKTTTCTK
Sbjct: 61 DFDEMAGGLNKRRMIQSAVFKELVKLVDPGVKPYQPIKGKANVVMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++QK+ WK LVCADTFRAGA+DQ+KQNATKA+IPFYGSYTE DPV IA +GV+ FK
Sbjct: 121 LAYHYQKRNWKSCLVCADTFRAGAYDQVKQNATKARIPFYGSYTEIDPVVIAQDGVDMFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
+E ++IIVDTSGRHKQE +LFEEM VS A V+PD +IFVMD++IGQA QA+AFK
Sbjct: 181 REGFEMIIVDTSGRHKQEESLFEEMLAVSNA-VSPDNIIFVMDATIGQACEAQAKAFKDK 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V +G+VI+TK+DGHAKGGGALSAVAAT+SP+IFIGTGEH+D+ E F KPFVS+LLGMGD
Sbjct: 240 VDIGSVIITKLDGHAKGGGALSAVAATQSPIIFIGTGEHIDDLEPFKTKPFVSKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G +DK++E + +D ELL+K+ G+FT+R MYEQFQNI+KMGP Q +M+PGFS +
Sbjct: 300 IEGLLDKVNE-LKLDGNDELLEKIKHGHFTIRDMYEQFQNIMKMGPFSQFMNMIPGFSQD 358
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQVREVM 417
M KG E+ES A++KR MTMMDSM++ ELD+ + KL + +R +R+A+G+G REV
Sbjct: 359 FMTKGGEQESMARVKRMMTMMDSMSDNELDNRDGAKLFSKQPNRCVRVAQGAGVMEREVK 418
Query: 418 EMLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV-------LPQGMLKQIG 469
E++ Y + + + KM G+K + K+G+M ++N+N M+K+ + ML+Q+G
Sbjct: 419 ELIAHYTKFSAVVKKMGGVKGLFKQGDM---TKNVNPTQMAKLNQLIAKTIDPRMLQQMG 475
Query: 470 GVGGLQNLMK 479
GVGG+QN+M+
Sbjct: 476 GVGGIQNMMR 485
>gi|386697117|gb|AFJ22019.1| signal recognition particle protein 54k, partial [Histiostomatidae
gen. sp. AD692]
Length = 449
Score = 547 bits (1410), Expect = e-153, Method: Compositional matrix adjust.
Identities = 268/451 (59%), Positives = 350/451 (77%), Gaps = 9/451 (1%)
Query: 13 AIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKR 72
AI+ + NAT+I+++VL+ L EI ALL+ADV LV++++ N++ +++ D++AAG NKR
Sbjct: 2 AIKSLGNATVINQEVLDNMLKEICAALLEADVNILLVKKLRENVRNVIDFDEMAAGLNKR 61
Query: 73 RIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKP 132
R+I A+F ELCK+LDPG + P KG+P+V+MFVGLQG GKTTT TK AY++ KKGWK
Sbjct: 62 RMIMMAVFQELCKLLDPGVKQWQPVKGRPNVVMFVGLQGIGKTTTVTKMAYHYMKKGWKC 121
Query: 133 ALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTS 192
ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA +GV F KEN +++IVDTS
Sbjct: 122 ALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVIIAADGVSKFAKENFEIVIVDTS 181
Query: 193 GRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMD 252
GRHKQE +LFEEM + AT +PDLV++VMD+SIGQA QA+AFK V +GA+IVTK+D
Sbjct: 182 GRHKQENSLFEEMLAIQAAT-SPDLVVYVMDASIGQACEAQAKAFKSKVDIGAIIVTKLD 240
Query: 253 GHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVV 312
GHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E +
Sbjct: 241 GHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE-L 299
Query: 313 PMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQA 372
++ EL++KL G FTLR MYEQ NI+KMGP Q+ +M+PGF EL E ES A
Sbjct: 300 KLEDNEELIEKLKHGEFTLRDMYEQLTNIMKMGPFNQILNMIPGFGPELSKCTSEAESAA 359
Query: 373 KIKRYMTMMDSMTNEELDS-SNPKLMN--DSRIMRIARGSGRQVREVMEMLEEYKRLAKI 429
++KR MT+MDSM++ ELDS KL N +RI+R+ARG+G REV E+L +Y + A++
Sbjct: 360 RLKRMMTIMDSMSDNELDSREGAKLFNRQTNRIVRVARGAGVFRREVQELLSQYTKFAQM 419
Query: 430 WSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 459
KM G+K + K+G+ L++N+N M+K+
Sbjct: 420 VKKMGGMKGLFKQGD---LTKNVNPMQMAKL 447
>gi|386697365|gb|AFJ22143.1| signal recognition particle protein 54k, partial [Pteronyssus aff.
centurus AD634]
Length = 464
Score = 547 bits (1410), Expect = e-153, Method: Compositional matrix adjust.
Identities = 273/463 (58%), Positives = 355/463 (76%), Gaps = 10/463 (2%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII++ VL+ L EI AL+++DV KLV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQDVLDSLLKEICTALIESDVNIKLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRRII + +F EL K+LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRIIMEGVFKELIKLLDPGVKVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
+K ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGV+ F KEN ++IIV
Sbjct: 123 FKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVDKFTKENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LVI+VMD+SIGQA QAQAFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVIYVMDASIGQACEAQAQAFKDKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPFVS++LGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFRVKPFVSKMLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL+ KL G FT+R MYEQ NI+KMGP Q+ +M+PGF ++L E E
Sbjct: 302 E-LKLDDNEELIGKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGADLAKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELD+ KL + +RI+R+ARGSG REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDGELDAREGAKLFSKQPTRIVRVARGSGVTQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
A + KM G+K + K G+ L++N+N M+K L Q M + I
Sbjct: 421 AAVVKKMGGIKGLFKSGD---LAKNVNPAQMAK-LNQQMARMI 459
>gi|386697089|gb|AFJ22005.1| signal recognition particle protein 54k, partial [Ptyctima gen. sp.
AD1287]
Length = 464
Score = 547 bits (1410), Expect = e-153, Method: Compositional matrix adjust.
Identities = 270/461 (58%), Positives = 356/461 (77%), Gaps = 10/461 (2%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L +I ALL+ADV KLV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINKEVLDGLLKDICTALLEADVNIKLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+IQ A+F EL K++DPG ++ P KG+ +++MFVGLQGSGKTTTCTK AYY+ +KG
Sbjct: 63 NKRRMIQMAVFKELVKLVDPGVKAWQPVKGRTNIVMFVGLQGSGKTTTCTKMAYYYVRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGV+ F E ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVDKFVSEGFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM +S AT P+L+I+VMD+SIGQA Q++AFK V VGAVIVT
Sbjct: 183 DTSGRHKQESSLFEEMLAISTAT-QPNLIIYVMDASIGQACEAQSRAFKSKVDVGAVIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAAT+SP+IFIGTGEH+D+FE F VKPFVS+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATQSPIIFIGTGEHIDDFEQFKVKPFVSKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FTLR MYEQF NI+KMGP Q+ +M+PGF ++L+ E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTLRDMYEQFTNIMKMGPFNQILNMIPGFGADLVKGASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL +RI R++RGSG +EV E+L +Y +
Sbjct: 361 SMSRLKRLMTIMDSMSDSELDSREGAKLFTKQPTRIQRVSRGSGVTQKEVQELLTQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLK 466
A + KM G+K + K G+M ++N+N M K L Q M K
Sbjct: 421 AAVVKKMGGIKGLFKGGDM---AKNVNQTQMMK-LNQQMAK 457
>gi|386697367|gb|AFJ22144.1| signal recognition particle protein 54k, partial [Stenopteronyssus
proctorae]
Length = 453
Score = 547 bits (1410), Expect = e-153, Method: Compositional matrix adjust.
Identities = 269/454 (59%), Positives = 351/454 (77%), Gaps = 9/454 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII++ VL+ L EI AL+++DV KLV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQDVLDSLLKEICTALIESDVNIKLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRRII + +F EL K+LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRIIMEGVFKELIKLLDPGVKVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
+K ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGV+ F KEN ++IIV
Sbjct: 123 FKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVDKFTKENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LVI+VMD+SIGQA QAQAFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVIYVMDASIGQACEAQAQAFKDKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPFVS++LGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFRVKPFVSKMLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL+ KL G FT+R MYEQ NI+KMGP Q+ +M+PGF ++L E E
Sbjct: 302 E-LKLDDNEELIGKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGADLAKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELD+ KL + +RI+R+ARGSG REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDGELDAREGAKLFSKQPTRIVRVARGSGVTQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 459
A + KM G+K + K G+ L++N+N M+K+
Sbjct: 421 AAVVKKMGGIKGLFKSGD---LAKNVNPAQMAKL 451
>gi|386697279|gb|AFJ22100.1| signal recognition particle protein 54k, partial [Falculifer sp.
AD994]
Length = 460
Score = 547 bits (1410), Expect = e-153, Method: Compositional matrix adjust.
Identities = 269/460 (58%), Positives = 353/460 (76%), Gaps = 10/460 (2%)
Query: 13 AIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKR 72
A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG NKR
Sbjct: 2 ALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGLNKR 61
Query: 73 RIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKP 132
++I A+F EL ++LDPG ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ KKGWK
Sbjct: 62 KMIMTAVFKELVRLLDPGVKAWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKGWKC 121
Query: 133 ALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTS 192
ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IVDTS
Sbjct: 122 ALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIVDTS 181
Query: 193 GRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMD 252
GRHKQE++LFEEM + +A + P+LV++VMD+SIGQA QA+AFK V VGA+IVTK+D
Sbjct: 182 GRHKQESSLFEEMLAI-QAAIQPNLVVYVMDASIGQACEAQARAFKDKVDVGAIIVTKLD 240
Query: 253 GHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVV 312
GHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK++E +
Sbjct: 241 GHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVRPFISKLLGMGDIEGLIDKVNE-L 299
Query: 313 PMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQA 372
+D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES +
Sbjct: 300 KLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAESMS 359
Query: 373 KIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKI 429
++KR MT+MDSM++ ELDS KL + +R +R+ARGSG REV E+L +Y + A +
Sbjct: 360 RLKRMMTIMDSMSDSELDSREGAKLFSKQPTRTVRVARGSGVTQREVQELLSQYTKFAAV 419
Query: 430 WSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
KM G+K + K G+ LS+N+N M+K L Q M K I
Sbjct: 420 VKKMGGIKGLFKTGD---LSKNVNPAQMAK-LNQQMAKMI 455
>gi|386697427|gb|AFJ22174.1| signal recognition particle protein 54k, partial [Anhemialges sp.
AD813]
Length = 460
Score = 547 bits (1409), Expect = e-153, Method: Compositional matrix adjust.
Identities = 268/460 (58%), Positives = 354/460 (76%), Gaps = 10/460 (2%)
Query: 13 AIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKR 72
A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG NKR
Sbjct: 2 ALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGLNKR 61
Query: 73 RIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKP 132
R+I A+F EL K+LDPG + P+K K +VIMFVGLQG GKTTTCTK AYY+ KKGWK
Sbjct: 62 RMIMMAVFKELVKLLDPGVKVWQPQKNKTNVIMFVGLQGIGKTTTCTKMAYYYMKKGWKC 121
Query: 133 ALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTS 192
ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGV+ F KEN +++IVDTS
Sbjct: 122 ALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVDKFTKENFEIVIVDTS 181
Query: 193 GRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMD 252
GRHKQE++LFEEM + +A + P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK+D
Sbjct: 182 GRHKQESSLFEEMLAI-QAAIQPNLVIYVMDASIGQACEAQARAFKNKVDVGAIIVTKLD 240
Query: 253 GHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVV 312
GHAKGGGALSAVAAT SP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E +
Sbjct: 241 GHAKGGGALSAVAATNSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE-L 299
Query: 313 PMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQA 372
+D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES +
Sbjct: 300 KLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCATEAESMS 359
Query: 373 KIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKI 429
++KR MT+MDSM++ ELDS KL + +R++R++RG+G REV+E+L +Y + A +
Sbjct: 360 RLKRMMTIMDSMSDSELDSREGAKLFSKQPTRVVRVSRGAGVAQREVLELLSQYTKFAAV 419
Query: 430 WSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 420 VKKMGGIKGLFKSGD---LTKNVNPAQMAK-LNQQMAKMI 455
>gi|386697485|gb|AFJ22203.1| signal recognition particle protein 54k, partial [Echimytricalges
guyanensis]
Length = 453
Score = 547 bits (1409), Expect = e-153, Method: Compositional matrix adjust.
Identities = 265/454 (58%), Positives = 352/454 (77%), Gaps = 9/454 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII++++L+ L EI AL+++DV LV++++ N++++++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEILDGLLKEICTALIESDVNIMLVKQLRENVRRVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDP + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFQELVKLLDPEVKVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LVI+VMD+SIGQA QA+AFKQ V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVIYVMDASIGQACEAQAKAFKQKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PFVS+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVRPFVSKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS K+ + +R++R+ARG+G REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDSREGAKIFSKQPTRLVRVARGAGVTQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 459
A + KM G+K + K G+ L++N+N M+K+
Sbjct: 421 AAVVKKMGGIKGLFKSGD---LTKNVNPAQMAKL 451
>gi|386697471|gb|AFJ22196.1| signal recognition particle protein 54k, partial [Mesalgoides sp.
AD938]
gi|386697473|gb|AFJ22197.1| signal recognition particle protein 54k, partial [Mesalgoides sp.
AD1042]
Length = 460
Score = 547 bits (1409), Expect = e-153, Method: Compositional matrix adjust.
Identities = 270/460 (58%), Positives = 354/460 (76%), Gaps = 10/460 (2%)
Query: 13 AIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKR 72
A++ + NATII++++L+ L EI AL+++DV LV++++ N++++++ D++AAG NKR
Sbjct: 2 ALRSLGNATIINQEILDGLLKEICTALIESDVNIMLVKQLRENVRRVIDFDEMAAGLNKR 61
Query: 73 RIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKP 132
R+I A+F EL K+LDP + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKGWK
Sbjct: 62 RMIMMAVFQELVKLLDPEVKVWQPIKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKGWKC 121
Query: 133 ALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTS 192
ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IVDTS
Sbjct: 122 ALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIVDTS 181
Query: 193 GRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMD 252
GRHKQE++LFEEM + +A + P+LVI+VMD+SIGQA QA+AFKQ V VGA+IVTK+D
Sbjct: 182 GRHKQESSLFEEMLAI-QAAIQPNLVIYVMDASIGQACEAQAKAFKQKVDVGAIIVTKLD 240
Query: 253 GHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVV 312
GHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PFVS+LLGMGD G +DK++E +
Sbjct: 241 GHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVRPFVSKLLGMGDIEGLIDKVNE-L 299
Query: 313 PMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQA 372
+D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES +
Sbjct: 300 KLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAESMS 359
Query: 373 KIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKI 429
++KR MT+MDSM++ ELDS K+ + +R++R+ARGSG REV E+L +Y + A +
Sbjct: 360 RLKRMMTIMDSMSDSELDSREGAKIFSKQPTRLVRVARGSGVSQREVQELLSQYTKFAAV 419
Query: 430 WSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 420 VKKMGGIKGLFKSGD---LTKNVNPAQMAK-LNQQMAKMI 455
>gi|386697647|gb|AFJ22284.1| signal recognition particle protein 54k, partial [Xynonodectes sp.
AD1213]
Length = 464
Score = 547 bits (1409), Expect = e-153, Method: Compositional matrix adjust.
Identities = 266/454 (58%), Positives = 351/454 (77%), Gaps = 9/454 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ +KG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKVWQPIKGKTNVIMFVGLQGIGKTTTCTKMAYYYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F +EN ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTRENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LVI+VMD+SIGQA QA+AFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVIYVMDASIGQACEAQAKAFKNKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL + +RI+R++RG+G REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIIRVSRGAGVTQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 459
A + KM G+K + K G+ +++N+N M K+
Sbjct: 421 AAVVKKMGGIKGLFKTGD---IAKNVNPTQMLKL 451
>gi|386697673|gb|AFJ22297.1| signal recognition particle protein 54k, partial [Carnilistrophorus
rhynchocyoni]
Length = 453
Score = 547 bits (1409), Expect = e-153, Method: Compositional matrix adjust.
Identities = 264/454 (58%), Positives = 351/454 (77%), Gaps = 9/454 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV KLV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLREICTALIESDVNIKLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I ++F EL K+LDPG + P KG+ +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIVMSVFKELVKLLDPGVKVWQPVKGRTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
W+ ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WRCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFSNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LVI+VMD+SIGQA QA+AFK V VGA+I+T
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVIYVMDASIGQACEAQAKAFKDKVDVGAIIIT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF EL E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGPELAKCASETE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL + +RI+R++RG+G REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVSRGAGVTQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 459
A + KM G+K + K G+ L++N+N M+K+
Sbjct: 421 AAVVKKMGGIKGLFKSGD---LTKNVNPAQMAKL 451
>gi|386697649|gb|AFJ22285.1| signal recognition particle protein 54k, partial [Xynonodectes sp.
B PBK-2011]
Length = 464
Score = 547 bits (1409), Expect = e-153, Method: Compositional matrix adjust.
Identities = 266/454 (58%), Positives = 350/454 (77%), Gaps = 9/454 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ KG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKVWQPXKGKTNVIMFVGLQGIGKTTTCTKMAYYYMXKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F +EN ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTRENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LVI+VMD+SIGQA QA+AFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVIYVMDASIGQACEAQAKAFKNKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL + +RI+R++RG+G REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIIRVSRGAGVTQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 459
A + KM G+K + K G+ +++N+N M K+
Sbjct: 421 AAVVKKMGGIKGLFKTGD---IAKNVNPTQMLKL 451
>gi|386697319|gb|AFJ22120.1| signal recognition particle protein 54k, partial [Phyllochaeta
tenuiseta]
Length = 464
Score = 547 bits (1409), Expect = e-153, Method: Compositional matrix adjust.
Identities = 266/463 (57%), Positives = 357/463 (77%), Gaps = 10/463 (2%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKR++I A+F L K+LDPG P++ P KGKP+++MFVGLQG GKTTTCTK AYY+ +KG
Sbjct: 63 NKRKMIMTAVFRNLVKLLDPGVPAWQPIKGKPNIVMFVGLQGIGKTTTCTKMAYYYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNA KA+IPFYGSYTESDPV IA EGVE FK+E ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNAHKARIPFYGSYTESDPVVIASEGVEKFKEEGFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE +LFEEM + +A + P+LV++VMD+SIGQA QA+AFK V VGA+IVT
Sbjct: 183 DTSGRHKQENSLFEEMLAI-QAAIQPNLVVYVMDASIGQACESQAKAFKNKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F+V+PF+S+LLGMGD G +D+++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFEVEPFISKLLGMGDIKGLIDRVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + ++ EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLEDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMN--DSRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR +T+MDSM++ ELDS KL + +RI+R+ARGSG REV E+L +Y +
Sbjct: 361 SMSRLKRMLTIMDSMSDSELDSREGAKLFSKQQTRIVRVARGSGVTQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
A + KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 421 AAVVKKMGGIKGLFKSGD---LAKNVNPAQMAK-LNQQMAKMI 459
>gi|386697129|gb|AFJ22025.1| signal recognition particle protein 54k, partial [Ovanoetus sp.
AD652]
Length = 452
Score = 547 bits (1409), Expect = e-153, Method: Compositional matrix adjust.
Identities = 267/454 (58%), Positives = 350/454 (77%), Gaps = 9/454 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ AI+ + NAT+I+++VL+ L EI ALL+ADV LV++++ N++ +++ D++AAG
Sbjct: 3 ITSAIRSLGNATVINQEVLDNMLKEICAALLEADVNILLVKKLRENVRNVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F ELCK+LDPG + P KG+ +V+MFVGLQG GKTTT TK AYY+ K+G
Sbjct: 63 NKRRMIMMAVFQELCKLLDPGVKQWQPVKGRTNVVMFVGLQGIGKTTTVTKLAYYYMKRG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA +GV F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVIIAADGVNKFAKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE +LFEEM + AT +PDLV++VMD+SIGQA QA+AFK V +GAVI+T
Sbjct: 183 DTSGRHKQENSLFEEMLAIQAAT-SPDLVVYVMDASIGQACESQAKAFKSKVDIGAVIIT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + ++ EL++KL G FTLR MYEQ NI+KMGP Q+ +M+PGF EL E E
Sbjct: 302 E-LKLEDNEELIEKLKHGEFTLRDMYEQLTNIMKMGPFNQILNMIPGFGPELSKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL N +RI R+ARG+G REV E+L +Y +
Sbjct: 361 SASRLKRMMTIMDSMSDNELDSREGAKLFNRQPNRIARVARGAGVWRREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 459
A++ KM G+K + K+G+ L++N+N M+K+
Sbjct: 421 AQMVKKMGGMKGLFKQGD---LTKNVNPMQMAKL 451
>gi|412992549|emb|CCO18529.1| predicted protein [Bathycoccus prasinos]
Length = 511
Score = 547 bits (1409), Expect = e-153, Method: Compositional matrix adjust.
Identities = 268/434 (61%), Positives = 344/434 (79%), Gaps = 9/434 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG ++ A+ +S T+IDE+++ + L EIT+ALL ADV + V +M+ NI K V
Sbjct: 1 MVLNDLGSKLANALSSLSKHTVIDEEIMEDVLKEITKALLSADVNVQYVVQMKKNIVKAV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPG------KPSFTPKKGKPSVIMFVGLQGSGK 114
++DDLA G N ++++++A+FNELC MLD G K F PKKGKP+V+MFVGLQG GK
Sbjct: 61 DIDDLAGGINAKKMLEKAVFNELCNMLDGGDAKSEVKAKFVPKKGKPNVVMFVGLQGCGK 120
Query: 115 TTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVE 174
TTTCTKYA Y+ +KG+KPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDP +IA E
Sbjct: 121 TTTCTKYASYYARKGFKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPAKIAAE 180
Query: 175 GVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQA 234
GV+ FK+E DLIIVDTSGRHKQ ALFEEMR V EA VNP + I+ MDSS+GQ A DQA
Sbjct: 181 GVQRFKEEKFDLIIVDTSGRHKQSEALFEEMRAVDEA-VNPTMTIYTMDSSMGQMAKDQA 239
Query: 235 QAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSR 294
+AFK +V VGAVI+TK DGH+KGGGA++AVAATKSP+IF+GTGEH+++ E FD +PFVSR
Sbjct: 240 EAFKSAVDVGAVIMTKTDGHSKGGGAIAAVAATKSPIIFVGTGEHLEDIEAFDTQPFVSR 299
Query: 295 LLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSML 354
LLG+GDW G M+K+ +VVP DQ +L+ ++ G FT+R++YEQFQNI KMGP+ QV SM+
Sbjct: 300 LLGLGDWQGLMEKLSDVVPEDQGQKLVDGITSGQFTMRLLYEQFQNITKMGPMSQVMSMI 359
Query: 355 PGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQV 413
PG + L P+G E+ QAKIKR + +MDSM++ ELD+ N K++ D R++RIARG+G+
Sbjct: 360 PGMADAL-PQGSERAGQAKIKRMLCLMDSMSDTELDTCNMKILTDKKRMIRIARGAGKTP 418
Query: 414 REVMEMLEEYKRLA 427
+ +E+LEE+KRLA
Sbjct: 419 QAYIELLEEFKRLA 432
>gi|386697489|gb|AFJ22205.1| signal recognition particle protein 54k, partial [Psoroptes ovis]
Length = 449
Score = 547 bits (1409), Expect = e-153, Method: Compositional matrix adjust.
Identities = 264/451 (58%), Positives = 351/451 (77%), Gaps = 9/451 (1%)
Query: 13 AIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKR 72
A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG NKR
Sbjct: 2 ALRSLGNATIINQEVLDGLLKEICTALIESDVNIMLVKKLRENVRNVIDFDEMAAGLNKR 61
Query: 73 RIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKP 132
R+I +A+F ELCK+LDP ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ KKGWK
Sbjct: 62 RMIMRAVFQELCKLLDPEVKAWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKGWKC 121
Query: 133 ALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTS 192
ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN ++IIVDTS
Sbjct: 122 ALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIIIVDTS 181
Query: 193 GRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMD 252
GRHKQE++LFEEM + +A + P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK+D
Sbjct: 182 GRHKQESSLFEEMLAI-QAAIQPNLVIYVMDASIGQACESQARAFKSKVDVGAIIVTKLD 240
Query: 253 GHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVV 312
GHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +D+++E +
Sbjct: 241 GHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVRPFISKLLGMGDIEGLIDRVNE-L 299
Query: 313 PMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQA 372
+D EL++K+ G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES +
Sbjct: 300 KLDDNEELIEKIKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAESMS 359
Query: 373 KIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKI 429
++KR MT+MDSM++ ELDS KL + +RI+R++RG+G REV E+L +Y + A +
Sbjct: 360 RLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVSRGAGCTQREVQELLSQYTKFAAV 419
Query: 430 WSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 459
KM G+K + K G+ L++N+N M+K+
Sbjct: 420 VKKMGGIKGLFKSGD---LAKNVNPAQMAKL 447
>gi|386697417|gb|AFJ22169.1| signal recognition particle protein 54k, partial [Megniniella sp.
AD966]
Length = 449
Score = 546 bits (1408), Expect = e-153, Method: Compositional matrix adjust.
Identities = 264/451 (58%), Positives = 353/451 (78%), Gaps = 9/451 (1%)
Query: 13 AIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKR 72
A++ + NATII+++VL+ L EI AL+QADV LV++++ N++K+++ D++AAG NKR
Sbjct: 2 ALRSLGNATIINQEVLDNLLKEICTALIQADVNIVLVKQLRENVRKVIDFDEMAAGLNKR 61
Query: 73 RIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKP 132
R+I A+FNEL ++LDPG ++ P+KGK +VIMFVGLQG GKTTTCTK AYY+ KKGWK
Sbjct: 62 RMIMMAVFNELVRLLDPGVKTWQPQKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKGWKC 121
Query: 133 ALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTS 192
ALVCADTFRAGAFDQLKQNATKA+IPF+GSYTESDPV IA EGVE F EN +++IVDTS
Sbjct: 122 ALVCADTFRAGAFDQLKQNATKARIPFFGSYTESDPVVIASEGVEKFTNENFEIVIVDTS 181
Query: 193 GRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMD 252
GRHKQE++LFEEM + +A + P+LVI+VMD+SIGQA QA+AFK+ V VGA+IVTK+D
Sbjct: 182 GRHKQESSLFEEMLAI-QAAIQPNLVIYVMDASIGQACEAQARAFKEKVDVGAIIVTKLD 240
Query: 253 GHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVV 312
GHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E +
Sbjct: 241 GHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVNE-L 299
Query: 313 PMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQA 372
++ EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL + ES +
Sbjct: 300 KLENNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASDAESMS 359
Query: 373 KIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKI 429
++KR MT+MDSM++ ELDS KL + +RI+R++RG+G REV E+L +Y + + +
Sbjct: 360 RLKRMMTIMDSMSDTELDSREGAKLFSKQPTRIVRVSRGAGVTQREVQELLHQYSKFSAV 419
Query: 430 WSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 459
KM G+K + K G+ ++N+N M+K+
Sbjct: 420 VKKMGGIKGLFKSGDP---AKNVNPAQMAKL 447
>gi|20151307|gb|AAM11013.1| AT23778p [Drosophila melanogaster]
Length = 569
Score = 546 bits (1408), Expect = e-153, Method: Compositional matrix adjust.
Identities = 277/490 (56%), Positives = 376/490 (76%), Gaps = 16/490 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A+ +S AT+I+E+ LN L EI ALL+ADV +LV++++ N++ ++
Sbjct: 1 MVLADLGRKITTALHSLSKATVINEEALNSMLKEICAALLEADVNIRLVKQLRENVRAVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ D++A G NKRR+IQ A+F EL K++DPG + P KGK +V+MFVGLQGSGKTTTCTK
Sbjct: 61 DFDEMAGGLNKRRMIQSAVFKELVKLVDPGVKPYQPIKGKANVVMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++QK+ WK LVCADTFRAGA+DQ+KQNATKA+IPFYGSYTE DPV IA +GV+ FK
Sbjct: 121 LAYHYQKRNWKSCLVCADTFRAGAYDQVKQNATKARIPFYGSYTEIDPVVIAQDGVDMFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
+E ++IIVDTSGRHKQE +LFEEM VS A V+PD +IFVMD++IGQA QA+AFK
Sbjct: 181 REGFEMIIVDTSGRHKQEESLFEEMLAVSNA-VSPDNIIFVMDATIGQACEAQAKAFKDK 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V +G+VI+TK+DGHAKGGGALSAVAAT+SP+IFIGTGEH+D+ E F KPFVS+LLGMGD
Sbjct: 240 VDIGSVIITKLDGHAKGGGALSAVAATQSPIIFIGTGEHIDDLEPFKTKPFVSKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G +DK++E + +D ELL+K+ G+FT+R MYEQFQNI+KMGP Q +M+PGFS +
Sbjct: 300 IEGLIDKVNE-LKLDGNDELLEKIKHGHFTIRDMYEQFQNIMKMGPFSQFMNMIPGFSQD 358
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQVREVM 417
M KG E+ES A++KR MTMMDSM++ ELD+ + KL + +R +R+A+G+G REV
Sbjct: 359 FMTKGGEQESMARVKRMMTMMDSMSDNELDNRDGAKLFSKQPNRCVRVAQGAGVMEREVK 418
Query: 418 EMLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNA-------QHMSKVLPQGMLKQIG 469
E++ Y + + + KM G+K + K+G+M ++N+N Q ++K++ ML+Q+G
Sbjct: 419 ELIAHYTKFSAVVKKMGGVKGLFKQGDM---TKNVNPTQMAKLNQQIAKMIDPRMLQQMG 475
Query: 470 GVGGLQNLMK 479
GVGG+QN+M+
Sbjct: 476 GVGGIQNMMR 485
>gi|386697437|gb|AFJ22179.1| signal recognition particle protein 54k, partial [Analges
passerinus]
Length = 448
Score = 546 bits (1408), Expect = e-153, Method: Compositional matrix adjust.
Identities = 265/450 (58%), Positives = 347/450 (77%), Gaps = 7/450 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG + P+K + +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKVWQPQKNRTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGV+ F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVDKFTKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LVI+VMD+SIGQA QA+AFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVIYVMDASIGQACEAQARAFKNKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCATEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL + +RI+R+ARG+G REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVARGAGVAQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLKIPKKGEMSALSRNMNAQHM 456
A + KM G+K KG L++N+N M
Sbjct: 421 AAVVKKMGGIKGLFKG--GDLTKNVNPAQM 448
>gi|386697269|gb|AFJ22095.1| signal recognition particle protein 54k, partial [Freyana sp. n.
AD630]
Length = 464
Score = 546 bits (1408), Expect = e-153, Method: Compositional matrix adjust.
Identities = 266/463 (57%), Positives = 356/463 (76%), Gaps = 10/463 (2%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKR++I A+F EL ++LDPG ++ P KGK ++IMFVGLQG GKTTTCTK AYY+ +KG
Sbjct: 63 NKRKMIMTAVFKELVRLLDPGVKAWQPAKGKTNIIMFVGLQGIGKTTTCTKMAYYYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGV+ F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVDKFTKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LV++VMD+SIGQA QA+AFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVVYVMDASIGQACESQARAFKNKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAAT SP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATNSPIIFIGTGEHIDEFEPFKVRPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLDDNGELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++K+ MT+MDSM++ ELDS KL + +RI+R+ARGSG REV E+L +Y +
Sbjct: 361 SMSRLKQMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVARGSGVTQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
A + KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 421 AAVVKKMGGIKGLFKSGD---LAKNVNPAQMAK-LNQQMAKMI 459
>gi|386697395|gb|AFJ22158.1| signal recognition particle protein 54k, partial [Strelkoviacarus
sp. AD771]
Length = 464
Score = 546 bits (1407), Expect = e-153, Method: Compositional matrix adjust.
Identities = 271/463 (58%), Positives = 356/463 (76%), Gaps = 10/463 (2%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
++ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 LTTALRSLGNATIINQEVLDNLLKEICTALIESDVNIILVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LD G+ + P KGK +V+MFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMILTAVFKELHKLLDSGEKLWQPVKGKTNVVMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
W+ ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IV
Sbjct: 123 WRCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + A + P+LVI+VMD+SIGQA QA+AFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAIQSA-IQPNLVIYVMDASIGQACEAQAKAFKNKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP++FIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPILFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + ++ ELL+KL G+FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLEDTEELLEKLKHGDFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S A++KR MT+MDS+++ ELDS KL + SRI+R+ARG+G REV E+L +Y +
Sbjct: 361 SMARLKRMMTIMDSLSDSELDSREGAKLFSKQPSRIVRVARGAGVPQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
A + KM G+K + K G+ LS+N+N M+K L Q M K I
Sbjct: 421 AAVVKKMGGIKGLFKSGD---LSKNVNPTQMAK-LNQQMAKMI 459
>gi|386697153|gb|AFJ22037.1| signal recognition particle protein 54k, partial [Crabrovidia sp.
AD610]
Length = 449
Score = 546 bits (1407), Expect = e-153, Method: Compositional matrix adjust.
Identities = 265/450 (58%), Positives = 346/450 (76%), Gaps = 7/450 (1%)
Query: 13 AIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKR 72
A++ + NATII+++VL+ L EI AL+++DV KLV++++ N++ +++ D++ AG NKR
Sbjct: 2 ALRSLGNATIINQEVLDNLLKEICTALIESDVNIKLVKQLRENVRTVIDFDEMGAGLNKR 61
Query: 73 RIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKP 132
R+I A+F EL K++DP ++ P KG+ +VIMFVGLQG GKTTTCTK AYY+ KKGWK
Sbjct: 62 RMIMMAVFQELVKLIDPVVKAWQPVKGRTNVIMFVGLQGIGKTTTCTKMAYYYMKKGWKC 121
Query: 133 ALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTS 192
ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IVDTS
Sbjct: 122 ALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIATEGVEKFSNENFEIVIVDTS 181
Query: 193 GRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMD 252
GRHKQE++LFEEM +S AT PDL+++VMD+SIGQA QA+AFK V VGA+IVTK+D
Sbjct: 182 GRHKQESSLFEEMLAISAAT-QPDLIVYVMDASIGQACEAQAKAFKSKVDVGAIIVTKLD 240
Query: 253 GHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVV 312
GHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E +
Sbjct: 241 GHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVNE-L 299
Query: 313 PMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQA 372
+D EL++KL G FTLR MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 300 KLDDNEELIEKLKHGEFTLRDMYEQLANIMKMGPFNQILNMIPGFGAELSKCTSEAESMF 359
Query: 373 KIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKI 429
++KR MT+MDSM++ ELDS KL + +R++R+ARG+G REV E+L +Y + A +
Sbjct: 360 RLKRMMTIMDSMSDSELDSREGAKLFSKQPTRLVRVARGAGVTKREVQELLSQYTKFAAV 419
Query: 430 WSKMKGLKIPKKGEMSALSRNMNAQHMSKV 459
KM G+K KG L++N+N M+K+
Sbjct: 420 VKKMGGIKGLFKG--GDLTKNVNPTQMAKL 447
>gi|386697167|gb|AFJ22044.1| signal recognition particle protein 54k, partial [Sennertia
zhelochovtsevi]
Length = 453
Score = 546 bits (1407), Expect = e-153, Method: Compositional matrix adjust.
Identities = 266/454 (58%), Positives = 349/454 (76%), Gaps = 9/454 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATI ++ VL+ L EI +AL+++DV LV++++ N++ +++ +++AAG
Sbjct: 3 ITTALRSLGNATIXNQDVLDSLLKEICKALIESDVNIMLVKQLRENVRSVIDFEEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL ++LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ +KG
Sbjct: 63 NKRRMIMMAVFKELVRLLDPGVKPWQPIKGKTNVIMFVGLQGIGKTTTCTKMAYYYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE +LFEEM +S A V P+L+++VMD+SIGQA QA+AFK V VGA+IVT
Sbjct: 183 DTSGRHKQENSLFEEMLAIS-AAVQPNLIVYVMDASIGQACEAQAKAFKSKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FTLR MYEQ NI+KMGP Q+ +M+PGF + L E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTLRDMYEQLTNIMKMGPFNQILNMIPGFGAXLSKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL + +RI+R+ARGSG REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIIRVARGSGVTQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 459
A + KM G+K + K G+ L++N+N M+K+
Sbjct: 421 AAVVKKMGGIKGLFKSGD---LAKNVNPAQMAKL 451
>gi|386697243|gb|AFJ22082.1| signal recognition particle protein 54k, partial [Histiogaster sp.
AD356]
Length = 450
Score = 546 bits (1407), Expect = e-153, Method: Compositional matrix adjust.
Identities = 266/453 (58%), Positives = 349/453 (77%), Gaps = 9/453 (1%)
Query: 11 SRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHN 70
+ AI+ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG N
Sbjct: 1 TTAIRSLGNATIINQEVLDNMLKEICAALIESDVNIVLVKKLRENVRSVIDFDEMAAGLN 60
Query: 71 KRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGW 130
KRR+I A+F EL K+LDPG ++ P KGK +VIMFVGLQG GKTTTCTK AY++ +KGW
Sbjct: 61 KRRMIMMAVFQELVKLLDPGVKAYQPVKGKTNVIMFVGLQGIGKTTTCTKMAYHYMRKGW 120
Query: 131 KPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVD 190
K ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IVD
Sbjct: 121 KCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIATEGVEKFTNENFEIVIVD 180
Query: 191 TSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 250
TSGRHKQE++LFEEM +S A V P +++VMD+SIGQA QA+AFK V VGA+IVTK
Sbjct: 181 TSGRHKQESSLFEEMLAIS-AAVQPQQIVYVMDASIGQACEAQAKAFKSKVDVGAIIVTK 239
Query: 251 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 310
+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E
Sbjct: 240 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE 299
Query: 311 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 370
+ +D EL++KL G FTLR MYEQ NI+KMGP Q+ +M+PGF +EL E ES
Sbjct: 300 -LKLDDNEELIEKLKHGEFTLRDMYEQLTNIMKMGPFNQILNMIPGFGAELSKCTSEAES 358
Query: 371 QAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLA 427
+++KR MT+MDSM++ ELDS KL + +RI+R+ARG+G REV E+L +Y + A
Sbjct: 359 MSRLKRMMTIMDSMSDAELDSREGAKLFSKQPTRIVRVARGAGVTQREVQELLSQYTKFA 418
Query: 428 KIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 459
+ KM G+K + K G+ L++N+N M+K+
Sbjct: 419 AVVKKMGGIKGLFKTGD---LTKNVNPAQMAKL 448
>gi|386697645|gb|AFJ22283.1| signal recognition particle protein 54k, partial [Metapterodectes
sp. n. AD556]
Length = 453
Score = 546 bits (1407), Expect = e-152, Method: Compositional matrix adjust.
Identities = 265/454 (58%), Positives = 350/454 (77%), Gaps = 9/454 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I ++F EL K+LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ +KG
Sbjct: 63 NKRRMIMMSVFKELVKLLDPGVKVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LVI+VMD+SIGQA QA+AFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVIYVMDASIGQACEAQAKAFKNKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL + +RI+R++RG+G REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIIRVSRGAGVTQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 459
A + +M G+K + K G+ + +N+N M K+
Sbjct: 421 AAVVKRMGGIKGLFKTGD---IGKNVNPAQMQKL 451
>gi|386697109|gb|AFJ22015.1| signal recognition particle protein 54k, partial [Ovanoetus sp.
AD678]
Length = 452
Score = 546 bits (1407), Expect = e-152, Method: Compositional matrix adjust.
Identities = 267/454 (58%), Positives = 350/454 (77%), Gaps = 9/454 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ AI+ + NAT+I+++VL+ L EI ALL+ADV LV++++ N++ +++ D++AAG
Sbjct: 3 ITSAIRSLGNATVINQEVLDNMLKEICAALLEADVNILLVKKLRENVRNVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F ELCK+LDPG + P KG+ +V+MFVGLQG GKTTT TK AYY+ K+G
Sbjct: 63 NKRRMIMMAVFQELCKLLDPGVKQWQPVKGRTNVVMFVGLQGIGKTTTVTKLAYYYMKRG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA +GV F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVIIAADGVNKFAKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE +LFEEM + AT +PDLV++VMD+SIGQA QA+AFK V +GAVI+T
Sbjct: 183 DTSGRHKQENSLFEEMLAIQAAT-SPDLVVYVMDASIGQACESQAKAFKSKVDIGAVIIT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + ++ EL++KL G FTLR MYEQ NI+KMGP Q+ +M+PGF EL E E
Sbjct: 302 E-LKLEDNEELIEKLKHGEFTLRDMYEQLTNIMKMGPFNQILNMIPGFGPELSKCTSEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL N +RI R+ARG+G REV E+L +Y +
Sbjct: 361 SASRLKRMMTIMDSMSDNELDSREGAKLFNRQPNRIARVARGAGVWRREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 459
A++ KM G+K + K+G+ L++N+N M+K+
Sbjct: 421 AQMVKKMGGMKGLFKQGD---LTKNVNPMQMAKL 451
>gi|386697141|gb|AFJ22031.1| signal recognition particle protein 54k, partial [Nanacarus sp.
AD833]
Length = 464
Score = 546 bits (1407), Expect = e-152, Method: Compositional matrix adjust.
Identities = 268/463 (57%), Positives = 354/463 (76%), Gaps = 10/463 (2%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV +LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICSALIESDVNIRLVKQLRENVRNVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A++ ELCK++DPG ++ P KG+P+V+MFVGLQG GKTTTCTK AY++ +KG
Sbjct: 63 NKRRMIMMAVYQELCKLIDPGVKAWQPVKGRPNVVMFVGLQGIGKTTTCTKLAYHYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
W+ ALVCADTFRAGAFDQLKQNATKA+IPFYGSY ESDPV IA EGV+ F EN D+IIV
Sbjct: 123 WRCALVCADTFRAGAFDQLKQNATKARIPFYGSYVESDPVVIAAEGVDKFINENFDIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM +S A V PDL+I+VMD+SIGQA QA+AF V VGAVIVT
Sbjct: 183 DTSGRHKQESSLFEEMLAISTA-VQPDLIIYVMDASIGQACEAQARAFSSKVDVGAVIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH++EFE F VKPF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHINEFEQFKVKPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D+ +L+ KL G FTLR MYEQ NI+KMGP Q+ SM+PGF +EL E E
Sbjct: 302 E-LKLDENDQLIDKLKHGEFTLRDMYEQLANIMKMGPFSQILSMIPGFGAELSNCTSEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +K+KR MT+MDSM++ ELDS KL + +R+ R+ARG+G EV E+L ++ +
Sbjct: 361 SMSKLKRMMTIMDSMSDGELDSREGSKLFSKQPTRVARVARGAGMTRAEVQELLTQFTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
A + KM G+K + K G+M +N+N M+K L Q M K I
Sbjct: 421 AAVVKKMGGIKGLFKSGDM---MKNVNPNQMAK-LNQQMAKMI 459
>gi|386697513|gb|AFJ22217.1| signal recognition particle protein 54k, partial [Microlichus sp.
AD759]
gi|386697515|gb|AFJ22218.1| signal recognition particle protein 54k, partial [Epidermoptidae
sp. B]
Length = 464
Score = 546 bits (1407), Expect = e-152, Method: Compositional matrix adjust.
Identities = 270/463 (58%), Positives = 354/463 (76%), Gaps = 10/463 (2%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N+++ ++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDGLLKEICTALIESDVNIMLVKQLRENVRREIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I +F EL K+LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMITVFQELVKLLDPGVKVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LVI+VMD+SIGQA QA+AFKQ V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVIYVMDASIGQACEAQARAFKQKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVRPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL + +R++R+ARG+G REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRLIRVARGAGVTQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
A + KM G+K + K G+ ++N+N M+K L Q M K I
Sbjct: 421 AAVVKKMGGIKGLFKSGD---FTKNVNPAQMAK-LNQQMAKMI 459
>gi|386697245|gb|AFJ22083.1| signal recognition particle protein 54k, partial [Sennertionyx
manicati]
Length = 464
Score = 546 bits (1406), Expect = e-152, Method: Compositional matrix adjust.
Identities = 263/453 (58%), Positives = 351/453 (77%), Gaps = 7/453 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ AI+ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ +++AAG
Sbjct: 3 ITTAIRSLGNATIINQEVLDNMLKEICSALIESDVNIMLVKQLRENVRSVIDFEEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG ++ P KG+ +VIMFVGLQG GKTTTCTK AY++ +KG
Sbjct: 63 NKRRMIMHAVFKELVKLLDPGVKTWQPTKGRTNVIMFVGLQGIGKTTTCTKMAYHYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGV+ F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVDKFTNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM +S A + P+L+++VMD+SIGQA QA+AFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAIS-AAIQPNLIVYVMDASIGQACEAQAKAFKSKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEEFKVKPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FTLR MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTLRDMYEQLTNIMKMGPFNQILNMIPGFGAELSKCTSEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++K+ MT+MDSM++ ELDS + KL + +R++RIARG+G REV E+L +Y +
Sbjct: 361 SMSRLKKMMTIMDSMSDSELDSRDGAKLFSKQPTRVVRIARGAGVTQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKV 459
A + KM G+K KG L++N+N M+K+
Sbjct: 421 AAVVKKMGGIKGLFKG--GDLTKNVNPAQMAKL 451
>gi|221059453|ref|XP_002260372.1| signal recognition particle [Plasmodium knowlesi strain H]
gi|193810445|emb|CAQ41639.1| signal recognition particle, putative [Plasmodium knowlesi strain
H]
Length = 500
Score = 546 bits (1406), Expect = e-152, Method: Compositional matrix adjust.
Identities = 256/491 (52%), Positives = 366/491 (74%), Gaps = 6/491 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL +LG ++ A+Q++ + + D+ + ECL E+ RAL+ AD+ ++++++NIKK +
Sbjct: 1 MVLTELGTQLTSALQKLQASAVADDSAIEECLKEVIRALILADINISYLKDIKSNIKKKI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ G+NK+R++QQ + EL +L+ K S+ PKKG +VI+FVGLQGSGKTTTCTK
Sbjct: 61 EKNIDLYGNNKKRLVQQYVVEELINLLEGKKESYVPKKGSRNVILFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
+A+Y+QKKG+K ALVCADTFRAGAFDQLKQNA K KIPFYGSY+E DPV+IA +GV F
Sbjct: 121 FAHYYQKKGFKTALVCADTFRAGAFDQLKQNAAKVKIPFYGSYSEVDPVKIASDGVNAFL 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KE DLIIVD+SGRHKQE+ LFEEM+QV E+++NP+ ++FV+DS IGQ+ DQA AFK S
Sbjct: 181 KEKYDLIIVDSSGRHKQESELFEEMKQV-ESSINPEEIVFVIDSHIGQSCHDQAMAFKNS 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V++G++I+TK+DGHAKGGGALSAVA+T P+ FIGTGEH+++FE F+ K FVSRLLG+GD
Sbjct: 240 VTLGSIIITKIDGHAKGGGALSAVASTGCPITFIGTGEHINDFEKFEAKSFVSRLLGLGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
+G + + EV+ +++QP+L+ +LS+G F LR MY+QFQN+ KMG + +V SM+PGF +
Sbjct: 300 INGLVSTLKEVIDIEKQPQLINRLSKGKFVLRDMYDQFQNVFKMGSLSKVMSMIPGFGNN 359
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEML 420
++ KG EKE KIK++M +MDSMTNEELD P +NDSR +RI +GSG +++++ E+L
Sbjct: 360 IISKGTEKEGIEKIKKFMVIMDSMTNEELDCVKP--LNDSRCLRICKGSGTRLQDIRELL 417
Query: 421 EEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNA--QHMSKVLPQGMLKQIGGVGGLQNLM 478
E++K L + SKM L + ++ + +L RN M+ ++ ML Q+GG + N++
Sbjct: 418 EQFKFLKNMVSKMGKLGL-RENNIGSLMRNQKQFLSKMNNIIDPSMLGQMGGANNMVNIL 476
Query: 479 KQMGSTKDMMG 489
K+ D+ G
Sbjct: 477 KEFTKMDDLGG 487
>gi|386697359|gb|AFJ22140.1| signal recognition particle protein 54k, partial [Ramphastobius sp.
A PBK-2011]
Length = 464
Score = 546 bits (1406), Expect = e-152, Method: Compositional matrix adjust.
Identities = 269/454 (59%), Positives = 350/454 (77%), Gaps = 9/454 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII++ VL+ L EI AL+++DV KLV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQDVLDSLLKEICTALIESDVNIKLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRRII + +F EL K+LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRIIMEGVFKELIKLLDPGVKVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
+K ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGV+ F KEN ++IIV
Sbjct: 123 FKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVDKFTKENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LVI+VMD+SIGQA QAQAFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVIYVMDASIGQACEAQAQAFKDKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPFVS++LGMGD G +DK+
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFRVKPFVSKMLGMGDIEGLIDKVT 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL+ KL G FT+R MYEQ NI+KMGP Q+ +M+PGF ++L E E
Sbjct: 302 E-LKLDDNEELIGKLKHGQFTIRDMYEQLTNIMKMGPFNQILNMIPGFGADLAKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELD+ KL + +RI+R+ARGSG REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDGELDAREGAKLFSKQPTRIVRVARGSGVTQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 459
A + KM G+K + K G+ L++N+N M+K+
Sbjct: 421 AAVVKKMGGIKGLFKSGD---LAKNVNPAQMAKL 451
>gi|386697363|gb|AFJ22142.1| signal recognition particle protein 54k, partial [Pteronyssus
sphyrapicinus]
Length = 460
Score = 546 bits (1406), Expect = e-152, Method: Compositional matrix adjust.
Identities = 272/460 (59%), Positives = 353/460 (76%), Gaps = 10/460 (2%)
Query: 13 AIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKR 72
A++ + NATII++ VL+ L EI AL+++DV KLV++++ N++ +++ D++AAG NKR
Sbjct: 2 ALRSLGNATIINQDVLDSLLKEICTALIESDVNIKLVKQLRENVRSVIDFDEMAAGLNKR 61
Query: 73 RIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKP 132
RII + +F EL K+LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG+K
Sbjct: 62 RIIMEGVFKELIKLLDPGVKVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKGFKC 121
Query: 133 ALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTS 192
ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGV+ F KEN ++IIVDTS
Sbjct: 122 ALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVDKFTKENFEIIIVDTS 181
Query: 193 GRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMD 252
GRHKQE++LFEEM + +A + P+LVI+VMD+SIGQA QAQAFK V VGA+IVTK+D
Sbjct: 182 GRHKQESSLFEEMLAI-QAAIQPNLVIYVMDASIGQACEAQAQAFKDKVDVGAIIVTKLD 240
Query: 253 GHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVV 312
GHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPFVS++LGMGD G +DK++E +
Sbjct: 241 GHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFRVKPFVSKMLGMGDIEGLIDKVNE-L 299
Query: 313 PMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQA 372
+D EL+ KL G FT+R MYEQ NI+KMGP Q+ +M+PGF ++L E ES +
Sbjct: 300 KLDDNEELIGKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGADLAKCASEAESMS 359
Query: 373 KIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKI 429
++KR MT+MDSM++ ELD+ KL + +RI+R+ARGSG REV E+L +Y + A +
Sbjct: 360 RLKRMMTIMDSMSDGELDAREGAKLFSKQPTRIIRVARGSGVTQREVQELLSQYTKFAAV 419
Query: 430 WSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
KM G+K + K G+ L++N+N M+K L Q M + I
Sbjct: 420 VKKMGGIKGLFKSGD---LAKNVNPAQMAK-LNQQMARMI 455
>gi|386697301|gb|AFJ22111.1| signal recognition particle protein 54k, partial [Scolaralichus sp.
AD1165]
Length = 464
Score = 546 bits (1406), Expect = e-152, Method: Compositional matrix adjust.
Identities = 269/463 (58%), Positives = 354/463 (76%), Gaps = 10/463 (2%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKR++I A+F EL ++LDPG ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRKMIMTAVFKELVRLLDPGVKAWQPIKGKTNVIMFVGLQGIGKTTTCTKMAYYYLKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA IP+YGSY ESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKAGIPYYGSYIESDPVVIASEGVEKFTNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A V P+LV++VMD+SIGQA QA+AFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAVQPNLVVYVMDASIGQACEAQARAFKNKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVRPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL + +RI+R+ARGSG REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIIRVARGSGVTQREVQELLTQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
A + KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 421 AAVVKKMGGIKGLFKSGD---LTKNVNPAQMAK-LNQQMAKMI 459
>gi|386697361|gb|AFJ22141.1| signal recognition particle protein 54k, partial [Parapteronyssus
picoides]
Length = 460
Score = 546 bits (1406), Expect = e-152, Method: Compositional matrix adjust.
Identities = 272/460 (59%), Positives = 353/460 (76%), Gaps = 10/460 (2%)
Query: 13 AIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKR 72
A++ + NATII++ VL+ L EI AL+++DV KLV++++ N++ +++ D++AAG NKR
Sbjct: 2 ALRSLGNATIINQDVLDSLLKEICTALIESDVNIKLVKQLRENVRSVIDFDEMAAGLNKR 61
Query: 73 RIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKP 132
RII + +F EL K+LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG+K
Sbjct: 62 RIIMEGVFKELIKLLDPGVKVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKGFKC 121
Query: 133 ALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTS 192
ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGV+ F KEN ++IIVDTS
Sbjct: 122 ALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVDKFTKENFEIIIVDTS 181
Query: 193 GRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMD 252
GRHKQE++LFEEM + +A + P+LVI+VMD+SIGQA QAQAFK V VGA+IVTK+D
Sbjct: 182 GRHKQESSLFEEMLAI-QAAIQPNLVIYVMDASIGQACEAQAQAFKDKVDVGAIIVTKLD 240
Query: 253 GHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVV 312
GHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPFVS++LGMGD G +DK++E +
Sbjct: 241 GHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFRVKPFVSKMLGMGDIEGLIDKVNE-L 299
Query: 313 PMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQA 372
+D EL+ KL G FT+R MYEQ NI+KMGP Q+ +M+PGF ++L E ES +
Sbjct: 300 KLDDNEELIGKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGADLAKCASEAESMS 359
Query: 373 KIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKI 429
++KR MT+MDSM++ ELD+ KL + +RI+R+ARGSG REV E+L +Y + A +
Sbjct: 360 RLKRMMTIMDSMSDGELDAREGAKLFSKQPTRIVRVARGSGVTQREVQELLSQYTKFAAV 419
Query: 430 WSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
KM G+K + K G+ L++N+N M+K L Q M + I
Sbjct: 420 VKKMGGIKGLFKSGD---LAKNVNPAQMAK-LNQQMARMI 455
>gi|386697285|gb|AFJ22103.1| signal recognition particle protein 54k, partial [Herodialges sp.
AD945]
Length = 464
Score = 545 bits (1405), Expect = e-152, Method: Compositional matrix adjust.
Identities = 268/463 (57%), Positives = 352/463 (76%), Gaps = 10/463 (2%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKR++I A+F EL ++LDPG ++ P KG +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRKMIMTAVFKELVRLLDPGVKAYQPIKGMTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIAAEGVEKFSKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LV++VMD+SIGQA QA+AFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVVYVMDASIGQACEAQARAFKSKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVRPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLM--NDSRIMRIARGSGRQVREVMEMLEEYKRL 426
S ++KR MT+MDSM++ ELDS KL +RI+R+ARGSG REV E+L +Y +
Sbjct: 361 SMFRLKRMMTIMDSMSDSELDSREGAKLFFKQPTRIVRVARGSGVTQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
A + KM G K + K G+ ++N+N ++K L Q M K I
Sbjct: 421 AAVVKKMGGTKGLFKSGD---FAKNVNPAQLAK-LNQQMAKMI 459
>gi|313236259|emb|CBY11581.1| unnamed protein product [Oikopleura dioica]
Length = 520
Score = 545 bits (1404), Expect = e-152, Method: Compositional matrix adjust.
Identities = 266/497 (53%), Positives = 368/497 (74%), Gaps = 19/497 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG ++ A++ + N+ +I+E VL +CL ++ ALL+ADV KLV+++ +KK +
Sbjct: 1 MVLADLGRKLTTALRSLGNSPVINEDVLKKCLKDVQSALLEADVNIKLVKQLTDGVKKQI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+LD++ G NKRR+IQ A++ ELC++ DPG + P KG+ SVIMFVGLQGSGKTT+C K
Sbjct: 61 DLDNIGTGLNKRRVIQTAVYKELCRICDPGVKPWKPTKGRSSVIMFVGLQGSGKTTSCIK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++QKKGWK A+VCADTFRAGA+DQ+KQN TKA+IPFYGS TE DP IA +GVETFK
Sbjct: 121 LAYHYQKKGWKCAVVCADTFRAGAYDQVKQNCTKARIPFYGSLTEPDPAVIAYDGVETFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KE D+IIVDTSGRHKQE +LFEEM QV+ A V PD +IFVMD+SIGQA QA+AFK
Sbjct: 181 KEKFDIIIVDTSGRHKQEDSLFEEMLQVNNA-VEPDNIIFVMDASIGQACESQAKAFKDQ 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V VG+VI+TK+D HAKGGGALSA+AAT+SP++FIGTGEH+DE E F+ F+ +LL MGD
Sbjct: 240 VDVGSVIITKLDSHAKGGGALSAIAATQSPIVFIGTGEHIDELEPFETTKFIRKLLNMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G +DK+++ + ++ +L + L +G FTLR MYEQFQNILKMGP Q+ M+PGF ++
Sbjct: 300 IEGLIDKVNQ-LKLEDNEDLKKNLQKGRFTLRDMYEQFQNILKMGPFNQIMGMIPGF-ND 357
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLM---NDS---RIMRIARGSGRQVR 414
M KG E+ES ++++ M +MDSM+ +ELDS + + ND R+ R+ARGSG +
Sbjct: 358 FMNKGHEQESTNRLRKLMCIMDSMSEDELDSPDGHKLFKNNDDGSRRLRRVARGSGSSPK 417
Query: 415 EVMEMLEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQ-------HMSKVLPQGMLKQ 467
EV E++++Y++ A++ KM G+ + K G+ LS+NMN Q HM+K++ +L+Q
Sbjct: 418 EVFELIDQYQKFAQMVKKMGGMGLFKNGD---LSKNMNMQQMNQINGHMAKMMDPRVLQQ 474
Query: 468 IGGVGGLQNLMKQMGST 484
+GG+ GL+ +M+Q +
Sbjct: 475 MGGMDGLKKMMQQFNQS 491
>gi|386697293|gb|AFJ22107.1| signal recognition particle protein 54k, partial [Grallobia sp.
AD959]
Length = 453
Score = 545 bits (1404), Expect = e-152, Method: Compositional matrix adjust.
Identities = 264/454 (58%), Positives = 352/454 (77%), Gaps = 9/454 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKR++I A+F EL ++LDPG ++ P KGK +VIMFVGLQG GKTTT TK AYY+ KKG
Sbjct: 63 NKRKMIMTAVFKELVRLLDPGVKAWQPVKGKTNVIMFVGLQGIGKTTTVTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LV++VMD+SIGQA QA+AFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVVYVMDASIGQACESQARAFKNKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVRPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E+ D + ELL+KL G FT+R MYEQ NI+KMGP Q+ +M+PGF ++L E E
Sbjct: 302 ELKLADNE-ELLEKLKHGEFTIRDMYEQLTNIMKMGPFNQMLNMIPGFGADLAKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS K+ + +R+MR+ARGSG REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDTELDSREGAKIFSKQPTRVMRVARGSGVTQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 459
A + KM G+K + K G+ L++N+N M+K+
Sbjct: 421 AAVVKKMGGIKGLFKSGD---LAKNVNPAQMAKL 451
>gi|386697639|gb|AFJ22280.1| signal recognition particle protein 54k, partial [Amerodectes sp.
AD680]
Length = 464
Score = 545 bits (1403), Expect = e-152, Method: Compositional matrix adjust.
Identities = 265/454 (58%), Positives = 349/454 (76%), Gaps = 9/454 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I ++F EL K+LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ +KG
Sbjct: 63 NKRRMIMMSVFKELVKLLDPGVKVWQPIKGKTNVIMFVGLQGIGKTTTCTKMAYYYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LVI+VMD+SIGQA QA+AFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVIYVMDASIGQACEAQAKAFKNKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM + ELDS KL + +RI+R++RG+G REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMADSELDSREGAKLFSKQPTRIIRVSRGAGVTQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 459
A + +M G+K + K G+ + +N+N M K+
Sbjct: 421 AAVVKRMGGIKGLFKTGD---IGKNVNPAQMQKL 451
>gi|386697137|gb|AFJ22029.1| signal recognition particle protein 54k, partial [Hemisarcoptidae
gen. sp. AD666]
Length = 464
Score = 545 bits (1403), Expect = e-152, Method: Compositional matrix adjust.
Identities = 268/463 (57%), Positives = 352/463 (76%), Gaps = 10/463 (2%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV +LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICSALIESDVNIRLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A++ ELCK++DPG ++ P KG+ +V+MFVGLQG GKTTTCTK AYY+ +KG
Sbjct: 63 NKRRMIMMAVYQELCKLIDPGVKAWQPVKGRTNVVMFVGLQGIGKTTTCTKMAYYYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
W+ ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN D+IIV
Sbjct: 123 WRCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIATEGVEKFTNENFDIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM +S A V PDL+I+VMD+SIGQA QA+AF V VGAVIVT
Sbjct: 183 DTSGRHKQESSLFEEMLAISTA-VQPDLIIYVMDASIGQACEAQARAFSSKVDVGAVIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH++EFE F KPF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHINEFEQFKAKPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D +L+ KL G FTLR MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLDDNEQLIDKLKHGEFTLRDMYEQLTNIMKMGPFNQILNMIPGFGAELSKCTSEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S K+KR MT+MDSM++ ELDS KL + +R++R+ARG+G EV E+L ++ +
Sbjct: 361 SMGKLKRMMTIMDSMSDSELDSREGSKLFSKQPTRMVRVARGAGVTRAEVQELLGQFTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
A + KM G+K + K G+M +N+N M+K L Q M K I
Sbjct: 421 AAVVKKMGGIKGLFKSGDM---MKNVNPTQMAK-LNQQMAKMI 459
>gi|386697139|gb|AFJ22030.1| signal recognition particle protein 54k, partial [Congovidia sp.
AD699]
Length = 464
Score = 545 bits (1403), Expect = e-152, Method: Compositional matrix adjust.
Identities = 267/463 (57%), Positives = 352/463 (76%), Gaps = 10/463 (2%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV +LV++++ N++ I++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICSALIESDVNIRLVKQLRENVRAIIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A++ ELCK++DPG ++ P KG +V+MFVGLQG GKTTTCTK AYY+ +KG
Sbjct: 63 NKRRMIMMAVYQELCKLIDPGVKAWQPVKGHTNVVMFVGLQGIGKTTTCTKMAYYYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
W+ ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGV+ F EN D+IIV
Sbjct: 123 WRCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIATEGVDKFINENFDIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM +S A V PDL+++VMD+SIGQA QA+AF V VGAVI+T
Sbjct: 183 DTSGRHKQESSLFEEMLAISTA-VQPDLIVYVMDASIGQACEAQARAFSSKVDVGAVIIT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IF+GTGEH++EFE F KPF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFVGTGEHINEFEQFKAKPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D +L+ KL G FTLR MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLDDNEQLIDKLKHGEFTLRDMYEQLTNIMKMGPFNQILNMIPGFGAELSKCTSEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S K+KR MT+MDSM++ ELDS KL + +RI+R+ARG+G EV E+L ++ R
Sbjct: 361 SMGKLKRMMTIMDSMSDSELDSREGSKLFSKQPTRIVRVARGAGASRAEVQELLVQFTRF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
A + KM G+K + K G+ LS+N+N M+K L Q M + I
Sbjct: 421 AGVVKKMGGIKGLFKSGD---LSKNVNPTQMAK-LNQQMARMI 459
>gi|66362756|ref|XP_628344.1| SRP54. signal recognition 54. GTpase. [Cryptosporidium parvum Iowa
II]
gi|46229785|gb|EAK90603.1| SRP54. signal recognition 54. GTpase. [Cryptosporidium parvum Iowa
II]
Length = 515
Score = 544 bits (1402), Expect = e-152, Method: Compositional matrix adjust.
Identities = 275/500 (55%), Positives = 360/500 (72%), Gaps = 10/500 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LGG ++ AI++ ++TI DE ++ CL EI ALL+ADV KLV +++ NIKK V
Sbjct: 16 MVLADLGGQLASAIRKFQSSTIADEAAIDLCLKEIATALLKADVNVKLVAQLRNNIKKAV 75
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+D G N+RR IQ A+ EL +L P + + P++ K +VI+FVGLQGSGKTTTCTK
Sbjct: 76 EQEDSVGGSNRRRQIQSAVVEELVNILTPSRTPYVPQRDKSNVIVFVGLQGSGKTTTCTK 135
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
+A Y+Q++GWK ALVCADTFRAGAFDQLKQNATK KIPFYGSYTE+DPV+IA +GV F+
Sbjct: 136 FANYYQRRGWKTALVCADTFRAGAFDQLKQNATKVKIPFYGSYTETDPVKIARDGVREFR 195
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KE DLIIVDTSGRHKQE++LF EM QV T NPD V+FVMDS IGQA +DQA AF +
Sbjct: 196 KEGYDLIIVDTSGRHKQESSLFVEMEQVVMET-NPDDVVFVMDSHIGQACYDQAMAFCNA 254
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V VG+VI+TK+DGHAKGGGALSAVAAT +P+IFIGTGEH DEFE F+ K FVSRLLG+GD
Sbjct: 255 VDVGSVIITKLDGHAKGGGALSAVAATGAPIIFIGTGEHFDEFEPFETKGFVSRLLGLGD 314
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
SG M KI+EVVP+D+QP+++ +L +G FTLR MYEQFQN+L MG + SM+PG
Sbjct: 315 ISGLMAKINEVVPLDRQPDMVNRLVQGIFTLRDMYEQFQNMLNMGSPSALLSMIPGMGPN 374
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEML 420
++ K E+ ++K++M +MDSMT ELD N K +N SR+ RI+RGSG ++V E+L
Sbjct: 375 ILAKEDEQAGIERLKKFMVIMDSMTESELD--NEKTINASRVERISRGSGTSNQDVQELL 432
Query: 421 EEYKRLAKIWSKM--KGLKIPKKGEMSALSRNMN--AQHMSKVLPQGMLKQIGGVGGLQN 476
++K +K+ ++ GL +MS++ +N Q M K + + K +GG + N
Sbjct: 433 SQHKMFSKMVGQIGKLGLGKKGGLDMSSIMKNPTQLIQKMQKAIDPRIFKHMGGAQNMMN 492
Query: 477 LMKQMG---STKDMMGMFGG 493
+M++M + D MFGG
Sbjct: 493 MMREMDKFQGSPDFQKMFGG 512
>gi|386697105|gb|AFJ22013.1| signal recognition particle protein 54k, partial [Kanoetus sp. n.
AD763]
Length = 452
Score = 544 bits (1402), Expect = e-152, Method: Compositional matrix adjust.
Identities = 263/454 (57%), Positives = 354/454 (77%), Gaps = 9/454 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ AI+ + NA II+++VL+ L E+ AL++ADV LV++++ N++K+++ +++AAG
Sbjct: 3 ITSAIRSLGNAPIINQQVLDGMLKEVCAALIEADVNILLVKKLRENVRKVIDFEEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I +F ELCK+LDPG +TP KGK +V+MFVGLQG GKTTT TK AYY+ K+G
Sbjct: 63 NKRRMIMMTVFQELCKLLDPGVAQWTPVKGKTNVVMFVGLQGIGKTTTVTKMAYYYMKRG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGV+ F ++ D++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVIIAAEGVKLFTEKAFDIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRH+QE++LFEEM + +AT +PDLV++VMD+SIGQA QA+AFK V++GA+IVT
Sbjct: 183 DTSGRHRQESSLFEEMLAI-QATTSPDLVVYVMDASIGQACEAQAKAFKNKVAIGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHA+GGGALSAVAATKSP+IFIGTGEH+D+FE F VKPFVS+LLGMGD G +DK++
Sbjct: 242 KLDGHARGGGALSAVAATKSPIIFIGTGEHIDQFEPFKVKPFVSKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + ++ EL+ KL G FTLR MYEQ NI+KMGP Q+ SMLPGF E+M + E
Sbjct: 302 E-LKLEDNEELINKLKHGEFTLRDMYEQLNNIMKMGPFNQILSMLPGFGPEMMKNASDAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDSSN-PKLMN--DSRIMRIARGSGRQVREVMEMLEEYKRL 426
S A++KR MT+MDSM++ ELDS KL N +RI+R+ARG+G REV ++L +Y +
Sbjct: 361 SAARLKRLMTIMDSMSDSELDSKEGSKLFNRQPTRIVRVARGAGVYQREVQDLLLQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 459
A++ KM G+K + K+G+ +++N+N M+K+
Sbjct: 421 AQMVKKMGGMKGLFKQGD---ITKNVNPMQMAKL 451
>gi|386697127|gb|AFJ22024.1| signal recognition particle protein 54k, partial [Sellea sp. AD658]
Length = 449
Score = 544 bits (1402), Expect = e-152, Method: Compositional matrix adjust.
Identities = 266/451 (58%), Positives = 349/451 (77%), Gaps = 9/451 (1%)
Query: 13 AIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKR 72
AI+ + NAT+I+++VL+ L EI ALL++DV LV++++ N++ +++ D++AAG NKR
Sbjct: 2 AIRSLGNATVINQEVLDNMLKEICAALLESDVNILLVKKLRENVRNVIDFDEMAAGLNKR 61
Query: 73 RIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKP 132
R+I A+F ELCK+LDPG + P KG+ +V+MFVGLQG GKTTT TK AYY+ K+GWK
Sbjct: 62 RMIMMAVFQELCKLLDPGVKQWQPVKGRTNVVMFVGLQGIGKTTTVTKMAYYYMKRGWKC 121
Query: 133 ALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTS 192
ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA +GV F KEN +++IVDTS
Sbjct: 122 ALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVIIAADGVSKFAKENFEIVIVDTS 181
Query: 193 GRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMD 252
GRHKQE++LFEEM + AT +PDLV++VMD+SIGQA QA+AFK V +GA+I+TK+D
Sbjct: 182 GRHKQESSLFEEMLAIQAAT-SPDLVVYVMDASIGQACEAQAKAFKSKVDIGAIIITKLD 240
Query: 253 GHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVV 312
GHAKGGGALSAVAATKSPVIFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E +
Sbjct: 241 GHAKGGGALSAVAATKSPVIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE-L 299
Query: 313 PMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQA 372
++ EL++KL G FTLR MYEQ NI+KMGP Q+ +M+PGF EL E ES A
Sbjct: 300 KLEDNEELIEKLKHGEFTLRDMYEQLTNIMKMGPFNQILNMIPGFGPELSKCTSEAESAA 359
Query: 373 KIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKI 429
++KR MT+MDSM++ ELDS KL N +RI R+ARG+G REV E+L +Y + A++
Sbjct: 360 RLKRMMTIMDSMSDNELDSREGAKLFNRQPNRIARVARGAGVWRREVQELLSQYTKFAQM 419
Query: 430 WSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 459
KM G+K + K+G+ L++N+N M+K+
Sbjct: 420 VKKMGGMKGLFKQGD---LTKNVNPMQMAKL 447
>gi|386697311|gb|AFJ22116.1| signal recognition particle protein 54k, partial [Ptiloxenus sp.
AD1257]
Length = 464
Score = 544 bits (1402), Expect = e-152, Method: Compositional matrix adjust.
Identities = 266/463 (57%), Positives = 355/463 (76%), Gaps = 10/463 (2%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKR++I A+F L K+LDPG P++ P KGKP+++MFVGLQG GKTTTCTK AYY+ +KG
Sbjct: 63 NKRKMIMTAVFRNLVKLLDPGVPAWQPVKGKPNIVMFVGLQGIGKTTTCTKMAYYYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNA KA+IPFYGSYTESDPV IA EGV+ F E ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNAHKARIPFYGSYTESDPVVIASEGVDKFINEGFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE +LFEEM + +A + P+LV++VMD+SIGQA QA+AFK V VGA+IVT
Sbjct: 183 DTSGRHKQENSLFEEMLAI-QAAIQPNLVVYVMDASIGQACESQARAFKNKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F+V+PF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFEVEPFISKLLGMGDIKGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL + +RI+R++RGSG REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPNRIIRVSRGSGVTQREVKELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
A + KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 421 AAVVKKMGGIKGLFKSGD---LAKNVNPAQMAK-LNQQMAKMI 459
>gi|386697131|gb|AFJ22026.1| signal recognition particle protein 54k, partial [Anoetus sp.
AD664]
Length = 449
Score = 544 bits (1402), Expect = e-152, Method: Compositional matrix adjust.
Identities = 267/451 (59%), Positives = 348/451 (77%), Gaps = 9/451 (1%)
Query: 13 AIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKR 72
AI+ + NAT+I+++VL+ L EI ALL+ADV LV++++ N++ +++ D++AAG NKR
Sbjct: 2 AIRSLGNATVINQEVLDSMLKEICAALLEADVNILLVKKLRENVRSVIDFDEMAAGLNKR 61
Query: 73 RIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKP 132
R+I A+F ELCK+LDPG + P KG+ +V+MFVGLQG GKTTT TK AYY+ K+GWK
Sbjct: 62 RMIMMAVFQELCKLLDPGVKQWQPVKGRTNVVMFVGLQGIGKTTTVTKLAYYYMKRGWKC 121
Query: 133 ALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTS 192
ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA +GV F KEN +++IVDTS
Sbjct: 122 ALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVIIAADGVNKFAKENFEIVIVDTS 181
Query: 193 GRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMD 252
GRHKQE +LFEEM + AT +PDLV++VMD+SIGQA QA+AFK V +GAVIVTK+D
Sbjct: 182 GRHKQENSLFEEMLAIQAAT-SPDLVVYVMDASIGQACESQAKAFKNKVDIGAVIVTKLD 240
Query: 253 GHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVV 312
GHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E +
Sbjct: 241 GHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE-L 299
Query: 313 PMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQA 372
++ EL++KL G FTLR MYEQ NI+KMGP Q+ +M+PGF EL E ES A
Sbjct: 300 KLEDNEELIEKLKHGEFTLRDMYEQLTNIMKMGPFNQILNMIPGFGPELSKCTSEAESAA 359
Query: 373 KIKRYMTMMDSMTNEELDS-SNPKLMN--DSRIMRIARGSGRQVREVMEMLEEYKRLAKI 429
++KR MT+MDSM++ ELDS KL N +RI R+ARG+G R+V E+L +Y + A++
Sbjct: 360 RLKRMMTIMDSMSDNELDSREGAKLFNRQPNRIARVARGAGVWRRDVQELLSQYTKFAQM 419
Query: 430 WSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 459
KM G+K + K+G+ L++N+N M+K+
Sbjct: 420 VKKMGGMKGLFKQGD---LTKNVNPMQMAKL 447
>gi|386697371|gb|AFJ22146.1| signal recognition particle protein 54k, partial [Pteronyssoides
piscinotus]
Length = 464
Score = 544 bits (1401), Expect = e-152, Method: Compositional matrix adjust.
Identities = 268/463 (57%), Positives = 353/463 (76%), Gaps = 10/463 (2%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV KLV++++ N++ I++ +++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIKLVKKLRENVRSIIDFEEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRRII + +F EL K+LDPG + P KGK +V+MFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRIIMEGVFKELVKLLDPGVKCWQPTKGKTNVVMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
++ ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN ++IIV
Sbjct: 123 YRSALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVIIASEGVEKFTKENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + A ++P+L+++VMD+SIGQA QAQAF+ V +GA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAIKSA-ISPNLIVYVMDASIGQACEAQAQAFQNKVDIGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAAT SP+IFIGTGEH+DEFE F VKPFVS++LGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATNSPIIFIGTGEHIDEFEPFRVKPFVSKMLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL+ KL G FT+R MYEQ NI+KMGP Q+ +M+PGF ++L E E
Sbjct: 302 E-LKLDDNEELIGKLKHGEFTIRDMYEQLINIMKMGPFNQILNMIPGFGADLAKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELD+ KL +RI R+ARGSG REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDAREGAKLFTKQPTRISRVARGSGVTQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
A + KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 421 AAVVKKMGGIKGLFKSGD---LTKNVNPSQMAK-LNQQMAKMI 459
>gi|386697635|gb|AFJ22278.1| signal recognition particle protein 54k, partial [Amerodectes sp.
AD1046]
Length = 464
Score = 544 bits (1401), Expect = e-152, Method: Compositional matrix adjust.
Identities = 265/454 (58%), Positives = 348/454 (76%), Gaps = 9/454 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLGSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I ++F EL K+LDPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ +KG
Sbjct: 63 NKRRMIMMSVFKELVKLLDPGVKVWQPIKGKTNVIMFVGLQGIGKTTTCTKMAYYYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LVI+VMD+SIGQA QA+AFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVIYVMDASIGQACEAQAKAFKNKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS K + +RI+R+ARG+G REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDSREGAKFFSKQPTRIVRVARGAGVTQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 459
A + +M G+K + K G+ + +N+N M K+
Sbjct: 421 AAVVKRMGGIKGLFKTGD---IGKNVNPAQMQKL 451
>gi|386697641|gb|AFJ22281.1| signal recognition particle protein 54k, partial [Amerodectes sp.
AD1195]
Length = 464
Score = 544 bits (1401), Expect = e-152, Method: Compositional matrix adjust.
Identities = 264/454 (58%), Positives = 349/454 (76%), Gaps = 9/454 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I ++F EL K+LDPG + P +GK +VIMFVGLQG GKTTTCTK AYY+ +KG
Sbjct: 63 NKRRMIMMSVFKELVKLLDPGVKVWQPVRGKTNVIMFVGLQGIGKTTTCTKMAYYYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LVI+VMD+SIGQA QA+AFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVIYVMDASIGQACEAQAKAFKNKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FT+R MYE NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTIRDMYETLTNIMKMGPFNQILNMIPGFGAELAKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL + +RI+R+ARG+G REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVARGAGVTQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 459
A + +M G+K + K G+ + +N+N M K+
Sbjct: 421 AAVVKRMGGIKGLFKTGD---IGKNVNPAQMQKL 451
>gi|340508125|gb|EGR33903.1| signal recognition particle 54 kda protein srp54, putative
[Ichthyophthirius multifiliis]
Length = 536
Score = 543 bits (1400), Expect = e-152, Method: Compositional matrix adjust.
Identities = 268/499 (53%), Positives = 362/499 (72%), Gaps = 9/499 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LG I+ A+ +++NA +ID+K+LN+ LNEI+ ALLQ+DV K V++++ NI
Sbjct: 1 MVLAELGQKINNALSKLNNAQVIDDKILNQVLNEISIALLQSDVNAKFVKKLKDNILVQF 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ + + N R++IQQ + EL MLD K F PK+G+P++IMFVGLQG GKTTTCTK
Sbjct: 61 KMQE-SESVNMRKMIQQLVIKELTAMLDSQKKPFIPKRGRPNIIMFVGLQGVGKTTTCTK 119
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YA Y QKKGW+ ALVCADTFRAGAFDQLKQNATK ++PFYGSY+E+D IA EGV TFK
Sbjct: 120 YANYWQKKGWRTALVCADTFRAGAFDQLKQNATKIRVPFYGSYSETDSSIIAEEGVRTFK 179
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KEN ++IIVDTSG H+QEA LFEEM+ VS A VNPD IFVMD S+GQA +DQA AF+Q+
Sbjct: 180 KENYEIIIVDTSGTHRQEAELFEEMKLVS-AAVNPDECIFVMDGSVGQACYDQASAFRQA 238
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V+VG+VI+TK+DGHAKGGGALSAVAAT+SP+IFIGTGEH D+ E FD + F+ RLLG+GD
Sbjct: 239 VNVGSVIITKLDGHAKGGGALSAVAATQSPIIFIGTGEHFDDLEPFDPQSFIKRLLGLGD 298
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
+G K+ EV+ + QQP+L+ +++EG F++R QF++ILK+G I Q SM+PG +
Sbjct: 299 IAGLFQKVTEVIDVKQQPQLINRIAEGQFSIRDFQSQFKSILKLGSISQFMSMIPGLGNS 358
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEML 420
+ K EKES K+K+++ +MDSM + ELD +++ RI++IA GSG + EV +L
Sbjct: 359 FLDKNNEKESIKKVKKFLCIMDSMNDLELDGDGK--ISEKRIVKIAYGSGNSIEEVHSLL 416
Query: 421 EEYKRLAKIWSKMKGLKIPKKGEMSALSRNMN--AQHMSKVLPQGMLKQIGGVGGLQNLM 478
EEYKRL+K++ K+ + K + S + RN A M L M++ +GG+G + N+M
Sbjct: 417 EEYKRLSKVFGKLGKTNLGKGNDFSNIQRNAQQIAGKMGSALDPKMIQSMGGMGNIMNIM 476
Query: 479 KQMGSTK---DMMGMFGGG 494
K M + +MM GGG
Sbjct: 477 KDMSKMEGLGEMMKGLGGG 495
>gi|399218124|emb|CCF75011.1| unnamed protein product [Babesia microti strain RI]
Length = 494
Score = 543 bits (1399), Expect = e-152, Method: Compositional matrix adjust.
Identities = 262/492 (53%), Positives = 366/492 (74%), Gaps = 7/492 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LG I+ A++++ AT+ID +++E + +I R+LL ADV K VR++Q N+KK +
Sbjct: 1 MVLAELGSQINGALRKLYCATVIDNTIIDEVIKDIVRSLLMADVNVKYVRQLQDNVKKAI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ G N+R++IQ+ IF+E+ ++ ++ PKKGK +VIMFVGLQG+GKTTTCTK
Sbjct: 61 YQGNEIVGANRRKLIQKTIFSEIVNLMTAKNEAYVPKKGKRNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
Y +Y+Q+KG L+CADTFRAGAFDQLKQNATKAKIPFYGSYTE++PV++A +GV+ FK
Sbjct: 121 YGHYYQRKGM-TGLICADTFRAGAFDQLKQNATKAKIPFYGSYTEANPVKVARDGVDKFK 179
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
E DLIIVDTSGRHKQ+ +L EEM+Q+ AT PD ++FV+DS IGQA +DQA AF ++
Sbjct: 180 SEKYDLIIVDTSGRHKQQESLLEEMKQI--ATAEPDDIVFVLDSHIGQACYDQALAFCKA 237
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V+VG+VI+TK+DGHAKGGGA+SAV+AT SP+IFIGTGEH D+FE FD + FVSRLLG GD
Sbjct: 238 VNVGSVIITKLDGHAKGGGAISAVSATNSPIIFIGTGEHFDDFEPFDPQSFVSRLLGFGD 297
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
+G ++ EVV + E ++++S+G F+LR MY+QFQN+LKMGP+GQV SM+PG SS
Sbjct: 298 INGLINTFKEVVENNGNNESIERISKGKFSLRDMYDQFQNVLKMGPMGQVMSMIPGISSN 357
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEML 420
++ KG+E+E A+IKR+M +MDSMT+EELD K + DSR MRIARGSG + E+ ++
Sbjct: 358 IIGKGQEQEGVARIKRFMVIMDSMTDEELDCE--KQITDSRSMRIARGSGCTIFEIKALI 415
Query: 421 EEYKRLAKIWSKMKGLKIPKKGEMSALSRNMN--AQHMSKVLPQGMLKQIGGVGGLQNLM 478
E++K L K+ KM + + K+ M ++ RN M ++ +LKQ+GG L N++
Sbjct: 416 EQHKLLHKMVGKMGKMGLNKESAMQSVMRNPQQIVSRMQNMIDPRLLKQMGGASNLVNII 475
Query: 479 KQMGSTKDMMGM 490
K+ +D+ +
Sbjct: 476 KEFSQREDLQAL 487
>gi|403264840|ref|XP_003924676.1| PREDICTED: signal recognition particle 54 kDa protein [Saimiri
boliviensis boliviensis]
Length = 567
Score = 543 bits (1399), Expect = e-152, Method: Compositional matrix adjust.
Identities = 265/449 (59%), Positives = 350/449 (77%), Gaps = 10/449 (2%)
Query: 22 IIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFN 81
+++ +VLN L E+ ALL+ADV KLV++++ N+K ++L+++A+G NKR++IQ A+F
Sbjct: 14 LVESRVLNAMLKEVCTALLEADVNIKLVKQLRENVKSAIDLEEMASGLNKRKMIQHAVFK 73
Query: 82 ELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFR 141
EL K++DPG ++TP KGK +VIMFVGLQGSGKTTTC+K AYY+Q+KGWK L+CADTFR
Sbjct: 74 ELVKLVDPGVKAWTPTKGKQNVIMFVGLQGSGKTTTCSKLAYYYQRKGWKTCLICADTFR 133
Query: 142 AGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAAL 201
AGAFDQLKQNATKA+IPFYGSYTE DPV IA EGVE FK EN ++IIVDTSGRHKQE +L
Sbjct: 134 AGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGVEKFKNENFEIIIVDTSGRHKQEDSL 193
Query: 202 FEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGAL 261
FEEM QV+ A + PD +++VMD+SIGQA QA+AFK V V +VIVTK+DGHAKGGGAL
Sbjct: 194 FEEMLQVANA-IQPDNIVYVMDASIGQACEAQAKAFKDKVDVASVIVTKLDGHAKGGGAL 252
Query: 262 SAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELL 321
SAVAATKSP+IFIGTGEH+D+FE F +PF+S+LLGMGD G +DK++E + +D L+
Sbjct: 253 SAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLLGMGDIEGLIDKVNE-LKLDDNEALI 311
Query: 322 QKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMM 381
+KL G FTLR MYEQFQNI+KMGP Q+ M+PGF ++ M KG E+ES A++K+ MT+M
Sbjct: 312 EKLKHGQFTLRDMYEQFQNIMKMGPFSQILGMIPGFGTDFMSKGNEQESMARLKKLMTIM 371
Query: 382 DSMTNEELDSSN-PKLMNDS--RIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLK- 437
DSM ++ELDS++ K+ + RI R+ARGSG R+V E+L +Y + A++ KM G+K
Sbjct: 372 DSMNDQELDSTDGAKVFSKQPGRIQRVARGSGVSTRDVQELLTQYTKFAQMVKKMGGIKG 431
Query: 438 IPKKGEMSALSRNMNAQHMSKVLPQGMLK 466
+ K G+M S+N++ M+K L Q M K
Sbjct: 432 LFKGGDM---SKNVSQSQMAK-LNQQMAK 456
>gi|386697317|gb|AFJ22119.1| signal recognition particle protein 54k, partial [Leptosyringobia
longitarsa]
Length = 464
Score = 543 bits (1398), Expect = e-152, Method: Compositional matrix adjust.
Identities = 266/463 (57%), Positives = 354/463 (76%), Gaps = 10/463 (2%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKR++I A+F L K+LDPG P++ P KGK +++MFVGLQG GKTTTCTK AYY+ +KG
Sbjct: 63 NKRKMIMTAVFRNLVKLLDPGVPAWQPIKGKANIVMFVGLQGIGKTTTCTKMAYYYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNA KA+IPFYGSYTESDPV IA EGVE F +E ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNAHKARIPFYGSYTESDPVVIASEGVEKFIEEGFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE +LFEEM + +A + P+LV++VMD+SIGQA QA+AFK V VGA+IVT
Sbjct: 183 DTSGRHKQENSLFEEMLAI-QAAIQPNLVVYVMDASIGQACESQAKAFKNKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F+V+PF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFEVEPFISKLLGMGDIKGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S ++KR MT+MDSM++ ELDS KL + +R++R+ARGSG REV E+L +Y +
Sbjct: 361 SMLRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRLVRVARGSGVTQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
A + KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 421 AAVVKKMGGIKGLFKSGD---LAKNVNPAQMAK-LNQQMAKMI 459
>gi|386697517|gb|AFJ22219.1| signal recognition particle protein 54k, partial [Myialges sp.
AD1127]
Length = 464
Score = 543 bits (1398), Expect = e-151, Method: Compositional matrix adjust.
Identities = 269/463 (58%), Positives = 354/463 (76%), Gaps = 10/463 (2%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N+++ ++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDGLLKEICTALIESDVNIMLVKQLRENVRREIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I +F EL K+LDP + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMITVFQELVKLLDPEVKVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFANENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LVI+VMD+SIGQA QA+AFKQ V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVIYVMDASIGQACEAQARAFKQKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVRPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL + E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASQAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL + +RI+R+ARG+G REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIIRVARGAGVTQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
A + KM G+K + + G+ L++N+N M+K L Q M K I
Sbjct: 421 AAVVKKMGGIKGLFRSGD---LAKNVNPSQMAK-LNQQMAKMI 459
>gi|194373485|dbj|BAG56838.1| unnamed protein product [Homo sapiens]
Length = 466
Score = 543 bits (1398), Expect = e-151, Method: Compositional matrix adjust.
Identities = 268/464 (57%), Positives = 359/464 (77%), Gaps = 12/464 (2%)
Query: 39 LLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKK 98
++ ADV KLV++++ N+K ++L+++A+G NKR++IQ A+F EL K++DPG ++TP K
Sbjct: 1 MVLADVNIKLVKQLRENVKSAIDLEEMASGLNKRKMIQHAVFKELVKLVDPGVKAWTPTK 60
Query: 99 GKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIP 158
GK +VIMFVGLQGSGKTTTC+K AYY+Q+KGWK L+CADTFRAGAFDQLKQNATKA+IP
Sbjct: 61 GKQNVIMFVGLQGSGKTTTCSKLAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIP 120
Query: 159 FYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLV 218
FYGSYTE DPV IA EGVE FK EN ++IIVDTSGRHKQE +LFEEM QV+ A + PD +
Sbjct: 121 FYGSYTEMDPVIIASEGVEKFKNENFEIIIVDTSGRHKQEDSLFEEMLQVANA-IQPDNI 179
Query: 219 IFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGE 278
++VMD+SIGQA QA+AFK V V +VIVTK+DGHAKGGGALSAVAATKSP+IFIGTGE
Sbjct: 180 VYVMDASIGQACEAQAKAFKDKVDVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGE 239
Query: 279 HMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQF 338
H+D+FE F +PF+S+LLGMGD G +DK++E + +D L++KL G FTLR MYEQF
Sbjct: 240 HIDDFEPFKTQPFISKLLGMGDIEGLIDKVNE-LKLDDNEALIEKLKHGQFTLRDMYEQF 298
Query: 339 QNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLM 397
QNI+KMGP Q+ M+PGF ++ M KG E+ES A++K+ MT+MDSM ++ELDS++ K+
Sbjct: 299 QNIMKMGPFSQILGMIPGFGTDFMSKGNEQESMARLKKLMTIMDSMNDQELDSTDGAKVF 358
Query: 398 ND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLK-IPKKGEMSA-LSRNMNA 453
+ RI R+ARGSG R+V E+L +Y + A++ KM G+K + K G+MS +S++ A
Sbjct: 359 SKQPGRIQRVARGSGVSTRDVQELLTQYTKFAQMVKKMGGIKGLFKGGDMSKNVSQSQMA 418
Query: 454 ---QHMSKVLPQGMLKQIGGVGGLQNLMKQM--GSTKDMMGMFG 492
Q M+K++ +L +GG+ GLQ++M+Q G+ +M GM G
Sbjct: 419 KLNQQMAKMMDPRVLHHMGGMAGLQSMMRQFQQGAAGNMKGMMG 462
>gi|68072789|ref|XP_678308.1| signal recognition particle 54 kDa protein [Plasmodium berghei
strain ANKA]
gi|56498733|emb|CAH96838.1| signal recognition particle 54 kDa protein, putative [Plasmodium
berghei]
Length = 500
Score = 543 bits (1398), Expect = e-151, Method: Compositional matrix adjust.
Identities = 261/496 (52%), Positives = 363/496 (73%), Gaps = 12/496 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL +LG ++ A+Q++ A + D+ ++ ECL EI RAL+ AD+ ++++++NIKK +
Sbjct: 1 MVLTELGAQLTNALQKIQAAPVADDNIIEECLKEIIRALILADINVIYLKDIKSNIKKNI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ A G+NK+R++Q+ + EL K+L+ K S+ PKKG +VI+FVGLQGSGKTTTCTK
Sbjct: 61 EKNAAAYGNNKKRLVQKYVVEELIKLLEGKKESYVPKKGDRNVILFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YA+Y+QKKG+K AL+CADTFRAGAFDQLKQNA K KIPFYGSY+E DPV+IA +GV F
Sbjct: 121 YAHYYQKKGFKTALICADTFRAGAFDQLKQNAAKVKIPFYGSYSEVDPVKIATDGVNAFL 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
K+ DLIIVD+SGRHKQE LFEEM+QV E+++ P+ ++FV+DS IGQ+ DQA AFK S
Sbjct: 181 KDKYDLIIVDSSGRHKQENDLFEEMKQV-ESSIKPEEIVFVIDSHIGQSCHDQAMAFKNS 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V VG++I+TK+DGHAKGGGALSAV+A P+ FIGTGEH+++FE F+ K FVSRLLG+GD
Sbjct: 240 VKVGSIIITKIDGHAKGGGALSAVSAIGCPITFIGTGEHVNDFEKFEAKSFVSRLLGLGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G + + EV+ +++QP+L+ ++++G F LR MY+QFQN+ KMG + +V SM+PGF +
Sbjct: 300 IDGLVSTLKEVIDIEKQPQLINRIAKGKFVLRDMYDQFQNVFKMGSLSKVMSMIPGFGTN 359
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEML 420
L+ KG EKE KIK+YM +MDSMTNEELD P +NDSR +RI +GSG ++ ++ E+L
Sbjct: 360 LISKGTEKEGIDKIKKYMVIMDSMTNEELDCVKP--LNDSRCIRICKGSGTKLSDIKELL 417
Query: 421 EEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSK---VLPQGMLKQIGGVGGLQNL 477
E++K L K+ KM L + + M L RN Q MSK ++ M +GG + N+
Sbjct: 418 EQFKFLQKMVLKMGKLGL-RDNNMGNLMRN-QKQFMSKMNNIMDPNMFNNMGGANNMVNM 475
Query: 478 MKQMGSTKDMMGMFGG 493
+K++ D FGG
Sbjct: 476 LKELTKMDD----FGG 487
>gi|386697289|gb|AFJ22105.1| signal recognition particle protein 54k, partial [Pterolichus
obtusus]
Length = 453
Score = 542 bits (1397), Expect = e-151, Method: Compositional matrix adjust.
Identities = 261/454 (57%), Positives = 351/454 (77%), Gaps = 9/454 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKR++I A+F EL ++LDPG ++ P KGK +V+MFVGLQG GKTTT TK AYY+ +KG
Sbjct: 63 NKRKMIMTAVFKELVRLLDPGVKAWQPVKGKTNVVMFVGLQGIGKTTTVTKMAYYYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F E ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNEGFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LV++VMD+SIGQA QA+AFK+ V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVVYVMDASIGQACESQARAFKEKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVRPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL + +RI+R+ARG+G REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVARGAGVMQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 459
A + KM G+K + K G+ L++N+N M+K+
Sbjct: 421 AAVVKKMGGIKGLFKSGD---LAKNVNPAQMAKL 451
>gi|71033463|ref|XP_766373.1| signal recognition particle 54 kDa protein [Theileria parva strain
Muguga]
gi|68353330|gb|EAN34090.1| signal recognition particle 54 kDa protein, putative [Theileria
parva]
Length = 495
Score = 542 bits (1397), Expect = e-151, Method: Compositional matrix adjust.
Identities = 259/492 (52%), Positives = 356/492 (72%), Gaps = 5/492 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+L I++A +++ + T+I E V+ E + +I RALL ADV KLV +++ N+K++
Sbjct: 1 MVLAELSNQITKAFRKLHSTTVISEAVIEEVIGDIVRALLMADVNVKLVHKLKENVKRLN 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ G NKRR +Q+ + +EL ML K F PKKG+ +VIMFVGLQG+GKTT+CTK
Sbjct: 61 KNNADMIGANKRRYLQKIVVDELVNMLTTEKKPFEPKKGRCNVIMFVGLQGAGKTTSCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
+AY++Q+KGW+ AL+CADTFRAGAFDQLKQNA K KI FYGSY+E++P ++A +GV FK
Sbjct: 121 FAYHYQRKGWRTALICADTFRAGAFDQLKQNAAKVKISFYGSYSEANPAKVAADGVARFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
+E D+IIVDTSGRHKQE ALF+EM+ + +A V PD V+FVMDS IGQA +DQA AF ++
Sbjct: 181 EEKYDMIIVDTSGRHKQEDALFDEMKLIYDA-VQPDEVVFVMDSHIGQACYDQAAAFNKA 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V VG+VI+TK+DGHAKGGGALSAV+AT SP+IFIGTGEH D+FE FD K F+SRLLG GD
Sbjct: 240 VDVGSVIITKLDGHAKGGGALSAVSATNSPIIFIGTGEHFDDFEPFDPKSFISRLLGFGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
+G ++ + +V+ +D +P+LL +++ FT+R MY+QFQN+LKM PIG+V SMLPG E
Sbjct: 300 INGLINTLKDVINLDDKPDLLDRIASAKFTIRDMYDQFQNLLKMAPIGKVMSMLPGIPPE 359
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEML 420
L+ GRE+E +IKR+M +MDSMT+EELD P +N SRIMRIA+GSG E+ ++
Sbjct: 360 LLQAGREQEGVDRIKRFMIIMDSMTDEELDCEKP--LNGSRIMRIAKGSGSSPHEISFLI 417
Query: 421 EEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNA--QHMSKVLPQGMLKQIGGVGGLQNLM 478
+++K L K+ M + + K M + RN N M ++ +L Q+GG G + LM
Sbjct: 418 DQHKTLQKMVGSMGKMGLNKDNAMQNIMRNPNQLLNKMQTMIDPRLLNQMGGAGNIMKLM 477
Query: 479 KQMGSTKDMMGM 490
K+ D+ +
Sbjct: 478 KEFSQNDDLQSL 489
>gi|386697687|gb|AFJ22304.1| signal recognition particle protein 54k, partial [Myocoptes
japonensis]
Length = 464
Score = 542 bits (1397), Expect = e-151, Method: Compositional matrix adjust.
Identities = 268/463 (57%), Positives = 351/463 (75%), Gaps = 10/463 (2%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ ++ AG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFGEMPAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG + P KG+ +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKVWQPVKGRTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE LFEEM + +A + P+LVI+VMD+SIGQA QA+AFK V VGA+IVT
Sbjct: 183 DTSGRHKQENTLFEEMLAI-QAAIQPNLVIYVMDASIGQACEAQAKAFKNKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL + +R++R++RG+G REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRVIRVSRGAGVTQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
A + KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 421 AAVVKKMGGIKGLFKSGD---LTKNVNPAQMAK-LNQQMAKMI 459
>gi|82705448|ref|XP_726974.1| signal recognition particle protein SRP54 [Plasmodium yoelii yoelii
17XNL]
gi|23482603|gb|EAA18539.1| signal recognition particle protein SRP54 [Plasmodium yoelii
yoelii]
Length = 500
Score = 542 bits (1397), Expect = e-151, Method: Compositional matrix adjust.
Identities = 263/496 (53%), Positives = 364/496 (73%), Gaps = 12/496 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL +LG ++ A+Q++ A + D+ V+ ECL EI RAL+ AD+ ++++++NIKK +
Sbjct: 1 MVLTELGAQLTSALQKIQAAPVADDNVIEECLKEIVRALILADINVIYLKDIKSNIKKNI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ A G+NK+R++Q+ + EL K+L+ K S+ PKKG+ +VI+FVGLQGSGKTTTCTK
Sbjct: 61 EKNAAAYGNNKKRLVQKYVVEELIKLLEGKKESYVPKKGERNVILFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YA+Y+QKKG+K AL+CADTFRAGAFDQLKQNA K KIPFYGSY+E DPV+IA +GV TF
Sbjct: 121 YAHYYQKKGFKTALICADTFRAGAFDQLKQNAAKVKIPFYGSYSEVDPVKIATDGVNTFL 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
K+ DLIIVD+SGRHKQE LFEEM+QV E ++ P+ ++FV+DS IGQ+ DQA AFK S
Sbjct: 181 KDKYDLIIVDSSGRHKQENDLFEEMKQV-ENSIKPEEIVFVIDSHIGQSCHDQAMAFKNS 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V VG++I+TK+DGHAKGGGALSAV+A P+ FIGTGEH+++FE F+ K FVSRLLG+GD
Sbjct: 240 VKVGSIIITKIDGHAKGGGALSAVSAIGCPITFIGTGEHVNDFEKFEAKSFVSRLLGLGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G + + EV+ +++QP+L+ ++++G F LR MY+QFQN+ KMG + +V SM+PGF +
Sbjct: 300 IDGLVSTLKEVIDIEKQPQLINRIAKGKFVLRDMYDQFQNVFKMGSLSKVMSMIPGFGTN 359
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEML 420
L+ KG EKE KIK+YM +MDSMTNEELD P +NDSR +RI +GSG ++ ++ E+L
Sbjct: 360 LISKGTEKEGIDKIKKYMVIMDSMTNEELDCVKP--LNDSRCIRICKGSGTKLSDIKELL 417
Query: 421 EEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSK---VLPQGMLKQIGGVGGLQNL 477
E++K L K+ KM L + + M L RN Q MSK ++ M +GG + N+
Sbjct: 418 EQFKFLQKMVLKMGKLGL-RDNNMGNLMRN-PKQFMSKMNNMMDPNMFNNMGGANNMVNM 475
Query: 478 MKQMGSTKDMMGMFGG 493
+K++ D FGG
Sbjct: 476 LKELTKMDD----FGG 487
>gi|386697393|gb|AFJ22157.1| signal recognition particle protein 54k, partial [Strelkoviacarus
aff. quadratus PBK-2011]
Length = 464
Score = 542 bits (1396), Expect = e-151, Method: Compositional matrix adjust.
Identities = 269/463 (58%), Positives = 354/463 (76%), Gaps = 10/463 (2%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
++ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 LTTALRSLGNATIINQEVLDNLLKEICTALIESDVNIVLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LD G + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMILTAVFKELYKLLDSGAKLWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
W+ ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IV
Sbjct: 123 WRCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + A + P+LVI+VMD+SIGQA QA+AFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAIQSA-IQPNLVIYVMDASIGQACEAQAKAFKNKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP++FIGTGEH+D FE F VKPF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPILFIGTGEHIDAFEPFKVKPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + ++ +LL+KL G+FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLEDTEDLLEKLRHGDFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S A++KR MT+MDS+++ ELDS KL + SR++R+ARG+G REV E+L +Y +
Sbjct: 361 SMARLKRMMTIMDSLSDSELDSREGAKLFSKQPSRLVRVARGAGVPQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
A + KM G+K + K G+ LS+N+N M+K L Q M K I
Sbjct: 421 AAVVKKMGGIKGLFKSGD---LSKNVNPTQMAK-LNQQMAKMI 459
>gi|386697287|gb|AFJ22104.1| signal recognition particle protein 54k, partial [Mesosathes sp.
AD1187]
Length = 464
Score = 541 bits (1395), Expect = e-151, Method: Compositional matrix adjust.
Identities = 266/463 (57%), Positives = 354/463 (76%), Gaps = 10/463 (2%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDNLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKR++I A+F EL ++LDPG ++ P KGK +V+MFVGLQG GKTTT TK AYY+ +KG
Sbjct: 63 NKRKMIMTAVFKELVRLLDPGVKAWQPVKGKANVVMFVGLQGIGKTTTVTKMAYYYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F E ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNEGFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LV++VMD+SIGQA QA+AFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVVYVMDASIGQACESQARAFKNKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVRPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+M+SM++ ELDS KL + +RI+R+ARGSG REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMESMSDSELDSREGAKLFSKQPTRIVRVARGSGVMQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
A + KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 421 AAVVKKMGGIKGLFKTGD---LAKNVNPAQMAK-LNQQMAKMI 459
>gi|386697259|gb|AFJ22090.1| signal recognition particle protein 54k, partial [Picidectes
chapini]
Length = 453
Score = 541 bits (1395), Expect = e-151, Method: Compositional matrix adjust.
Identities = 261/454 (57%), Positives = 351/454 (77%), Gaps = 9/454 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV+ ++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKRLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL ++LDPG ++ P KG+ +VIMFVGLQG GKTTTCTK AYY+ +KG
Sbjct: 63 NKRRMIMMAVFKELGRLLDPGVKAWQPVKGRTNVIMFVGLQGIGKTTTCTKMAYYYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPF+GSYTESDPV IA EGVE F EN ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFFGSYTESDPVVIASEGVEKFSNENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LV++VMD+SIGQA QA+AFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVVYVMDASIGQACEAQAKAFKSKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAAT SP+IFIGTGEH+DEFE+F VKPF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATNSPIIFIGTGEHIDEFELFKVKPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + ++ EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLEDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL + +RI+R+ARG+G +EV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVARGAGVFQKEVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 459
A + KM G+K + K G+ L++N+N M+K+
Sbjct: 421 AAVVKKMGGIKGLFKSGD---LTKNVNPAQMAKL 451
>gi|386697429|gb|AFJ22175.1| signal recognition particle protein 54k, partial [Hemialges sp. n.
AD673]
Length = 464
Score = 541 bits (1395), Expect = e-151, Method: Compositional matrix adjust.
Identities = 267/463 (57%), Positives = 355/463 (76%), Gaps = 10/463 (2%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDNLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDPG + P+K + +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFKELVKLLDPGVKVWQPQKNRTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGV+ F KEN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVDKFTKENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LVI+VMD+SIGQA QA+AFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVIYVMDASIGQACEAQARAFKNKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAAT+SP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATQSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDLEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E+ D Q +L++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF ++L E E
Sbjct: 302 ELKLEDNQ-DLIEKLKHGEFTIRDMYEQLTNIIKMGPFNQILNMIPGFGADLAKCATEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S ++KR MT+MDSM++ ELDS KL + +R++R+ARG+G R+V E+L +Y +
Sbjct: 361 SMFRLKRMMTIMDSMSDTELDSREGAKLFSKQPTRVVRVARGAGVTQRDVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
A + KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 421 AAVVKKMGGIKGLFKSGD---LNKNVNPSQMAK-LNQQMAKMI 459
>gi|156100321|ref|XP_001615888.1| signal recognition particle 54 kDa protein [Plasmodium vivax Sal-1]
gi|148804762|gb|EDL46161.1| signal recognition particle 54 kDa protein, putative [Plasmodium
vivax]
Length = 500
Score = 541 bits (1394), Expect = e-151, Method: Compositional matrix adjust.
Identities = 256/491 (52%), Positives = 365/491 (74%), Gaps = 6/491 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL +LG ++ A+Q++ + + D+ + ECL E+ RAL+ AD+ ++++++NIKK +
Sbjct: 1 MVLTELGTQLTCALQKLQASAVADDSAIEECLKEVMRALILADINISYLKDIKSNIKKNI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ G+NK+R++QQ + EL +L+ K S+ PKKG +VI+FVGLQGSGKTTTCTK
Sbjct: 61 EKNIDLYGNNKKRLVQQYVVEELINLLEGKKESYVPKKGSRNVILFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
+A+Y+QKKG+K ALVCADTFRAGAFDQLKQNA K KIPFYGSY+E DPV+IA +GV F
Sbjct: 121 FAHYYQKKGFKTALVCADTFRAGAFDQLKQNAAKVKIPFYGSYSEVDPVKIASDGVNAFL 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KE DLIIVD+SGRHKQE+ LFEEM+QV E+++ P+ ++FV+DS IGQ+ DQA AFK S
Sbjct: 181 KEKYDLIIVDSSGRHKQESELFEEMKQV-ESSIRPEEIVFVIDSHIGQSCHDQAMAFKNS 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V++G++I+TK+DGHAKGGGALSAVA+T P+ FIGTGEH+++FE F+ K FVSRLLG+GD
Sbjct: 240 VTLGSIIITKIDGHAKGGGALSAVASTGCPITFIGTGEHINDFENFEAKSFVSRLLGLGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
+G + + EV+ +++QP+L+ +LS+G F LR MY+QFQN+ KMG + +V SM+PGF +
Sbjct: 300 INGLVSTLKEVIDIEKQPQLINRLSKGKFVLRDMYDQFQNVFKMGSLSKVMSMIPGFGNN 359
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEML 420
L+ KG EKE KIK++M +MDSMTNEELD P +NDSR +RI +GSG +++++ E+L
Sbjct: 360 LISKGTEKEGIEKIKKFMVIMDSMTNEELDCVKP--LNDSRCLRICKGSGTRLQDIRELL 417
Query: 421 EEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNA--QHMSKVLPQGMLKQIGGVGGLQNLM 478
E++K L + SKM L + ++ +++L RN M+ + ML Q+GG + N++
Sbjct: 418 EQFKFLKNMVSKMGKLGL-RENNLNSLMRNQKHFLSKMNNFIDPSMLGQMGGPNNMVNIL 476
Query: 479 KQMGSTKDMMG 489
K+ D+ G
Sbjct: 477 KEFTKMDDLGG 487
>gi|386697533|gb|AFJ22227.1| signal recognition particle protein 54k, partial [Trochiloptes sp.
AD1143]
Length = 464
Score = 541 bits (1393), Expect = e-151, Method: Compositional matrix adjust.
Identities = 270/462 (58%), Positives = 350/462 (75%), Gaps = 8/462 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI +AL+++DV KLV++++ N++ I++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDNLLKEICKALIESDVNIKLVKKLRENVRSIIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL K+LDP + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMMAVFQELVKLLDPEVKPWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFQIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LV++VMD+SIGQA QA+AFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVVYVMDASIGQACESQARAFKNKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK+
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVS 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D+ EL++KL G FT+R MYEQ N +KMGPI Q+ SM+PGF +EL E E
Sbjct: 302 E-LKLDENEELIEKLKHGEFTIRDMYEQITNFMKMGPINQILSMIPGFGAELAQCTSEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDSSN-PKLM--NDSRIMRIARGSGRQVREVMEMLEEYKRL 426
+ +++KR MT+MDSM++ ELD+ + KL +R R+ARG+G R+V E+L +Y +
Sbjct: 361 TMSRLKRMMTIMDSMSDTELDARDGTKLFYKQPNRFARVARGAGVSQRDVQELLSQYNKF 420
Query: 427 AKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
+ KM G+K KG L++N++ M K L Q M K I
Sbjct: 421 KAVVKKMGGIKGLFKG--GDLNKNVHPTQMFK-LNQQMAKMI 459
>gi|386697163|gb|AFJ22042.1| signal recognition particle protein 54k, partial [Roubikia sp.
AD863]
Length = 453
Score = 540 bits (1392), Expect = e-151, Method: Compositional matrix adjust.
Identities = 269/454 (59%), Positives = 348/454 (76%), Gaps = 10/454 (2%)
Query: 19 NATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQA 78
NATII+++VL+ L EI AL+++DV LV++++ N++ +++ +++AAG NKRR+I A
Sbjct: 1 NATIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFEEMAAGLNKRRMIMMA 60
Query: 79 IFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCAD 138
+F EL ++LDP + P KGK ++IMFVGLQG GKTTTCTK AY++ KKGWK ALVCAD
Sbjct: 61 VFRELVRLLDPDVAPWQPIKGKTNIIMFVGLQGIGKTTTCTKMAYHYMKKGWKCALVCAD 120
Query: 139 TFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQE 198
TFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IVDTSGRHKQE
Sbjct: 121 TFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIVIVDTSGRHKQE 180
Query: 199 AALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGG 258
+LFEEM +S A V P+L+++VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGG
Sbjct: 181 NSLFEEMLAIS-AAVQPNLIVYVMDASIGQACEAQARAFKSKVDVGAIIVTKLDGHAKGG 239
Query: 259 GALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQP 318
GALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E + +D
Sbjct: 240 GALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE-LKLDDNE 298
Query: 319 ELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYM 378
EL++KL G FTLR MYEQ NI+KMGP Q+ +M+PGF +EL E ES +++KR M
Sbjct: 299 ELIEKLKHGEFTLRDMYEQLTNIMKMGPFNQILNMIPGFGAELSKCTSEAESMSRLKRMM 358
Query: 379 TMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKG 435
T+MDSM++ ELDS KL + +RI+R+ARGSG REV E+L +Y + A + KM G
Sbjct: 359 TIMDSMSDSELDSREGAKLFSKQPTRIVRVARGSGVTQREVQELLSQYTKFAAVVKKMGG 418
Query: 436 LK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
+K + K G+ L++N+N M+K L Q M K I
Sbjct: 419 IKGLFKSGD---LTKNVNPAQMAK-LNQQMAKMI 448
>gi|428673047|gb|EKX73960.1| signal recognition particle 54kDa protein 2, putative [Babesia
equi]
Length = 496
Score = 540 bits (1392), Expect = e-151, Method: Compositional matrix adjust.
Identities = 265/494 (53%), Positives = 365/494 (73%), Gaps = 8/494 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+L I++A +++ T+I E V+ E + +I RALL ADV KLV +++ N+K++
Sbjct: 1 MVLAELSTQITQAFRKLHATTVISEAVIEEVIGDIVRALLLADVNVKLVHKLRENVKRLN 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ G NKRR +Q+ + +EL ML K F PKKG+P+VIMFVGLQG+GKTT+CTK
Sbjct: 61 KNNADMIGANKRRYLQKIVVDELVSMLTTEKKPFEPKKGRPNVIMFVGLQGAGKTTSCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
+AY++Q+KGW+ AL+CADTFRAGAFDQLKQNA K KI F+GSY+E++P ++A +GV FK
Sbjct: 121 FAYHYQRKGWRTALICADTFRAGAFDQLKQNAAKVKISFFGSYSEANPAKVAADGVARFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
E D+IIVDTSGRHKQE ALFEEM+ + +A V PD VIFVMDS IGQA +DQA AF ++
Sbjct: 181 AEKYDMIIVDTSGRHKQEDALFEEMKLIHDA-VQPDEVIFVMDSHIGQACYDQAAAFNKA 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V VG+VI+TK+DGHAKGGGALSAVAAT SP+IFIGTGEH D+FE F+ K F+SRLLG GD
Sbjct: 240 VDVGSVIITKLDGHAKGGGALSAVAATNSPIIFIGTGEHFDDFEQFEAKSFISRLLGFGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
+G ++ + +V+ +D++P+L+++L FT+R MY+QFQ++LKMGP+G+V SMLPG E
Sbjct: 300 INGLVNTLKDVMNLDEKPDLMERLVNAKFTIRDMYDQFQSLLKMGPVGKVMSMLPGIPPE 359
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEML 420
L+ GRE+E A+IKR+M +MDSMT+EELD P + +SR++RIA+GSG EV+ ++
Sbjct: 360 LLAAGREQEGVARIKRFMIIMDSMTDEELDCIKP--VTESRVLRIAKGSGSHPAEVVMLV 417
Query: 421 EEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKV---LPQGMLKQIGGVGGLQNL 477
+++K L K+ M + + K M + RN N Q +SK+ L +L+Q+GG G + L
Sbjct: 418 DQHKLLQKMVGGMGKMGLTKDTAMQNMLRNPN-QMLSKMQNFLDPRLLQQMGGPGTIMKL 476
Query: 478 MKQMGSTKDMMGMF 491
MK+ S D +G F
Sbjct: 477 MKEF-SQNDELGAF 489
>gi|386697519|gb|AFJ22220.1| signal recognition particle protein 54k, partial [Promyialges sp.
AD1177]
Length = 464
Score = 540 bits (1390), Expect = e-151, Method: Compositional matrix adjust.
Identities = 267/463 (57%), Positives = 353/463 (76%), Gaps = 10/463 (2%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV++++ N+++ ++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDGLLKEICTALIESDVNIMLVKQLRENVRREIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I +F EL K+LDP + P K + +VIMFVGLQG GKTTTCTK AYY+ KKG
Sbjct: 63 NKRRMIMITVFQELVKLLDPEVKVWQPVKNRTNVIMFVGLQGIGKTTTCTKMAYYYMKKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LVI+VMD+SIGQA QA+AFKQ V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVIYVMDASIGQACEAQARAFKQKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVRPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLDDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL + +R++R+ARG+G REV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRLIRVARGAGVTQREVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
A + KM G+K + + G+ L++N+N M+K L Q M K I
Sbjct: 421 AAVVKKMGGIKGLFRSGD---LAKNVNPAQMAK-LNQQMAKMI 459
>gi|84998408|ref|XP_953925.1| signal recognition particle 54kDa protein 2 [Theileria annulata]
gi|65304923|emb|CAI73248.1| signal recognition particle 54kDa protein 2, putative [Theileria
annulata]
Length = 495
Score = 540 bits (1390), Expect = e-151, Method: Compositional matrix adjust.
Identities = 257/492 (52%), Positives = 356/492 (72%), Gaps = 5/492 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+L I++A +++ + T+I E V+ E + +I RALL ADV KLV +++ N+K++
Sbjct: 1 MVLAELSNQITQAFRKLHSTTVISEAVIEEVIGDIVRALLMADVNVKLVHKLKENVKRLN 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ G NKRR +Q+ + +EL ML K F PKKG+ +VIMFVGLQG+GKTT+CTK
Sbjct: 61 KNNSDMIGANKRRYLQKIVVDELVNMLTTEKKPFEPKKGRCNVIMFVGLQGAGKTTSCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
+AY++Q+KGW+ AL+CADTFRAGAFDQLKQNA K KI FYGSY+E++P ++A +GV FK
Sbjct: 121 FAYHYQRKGWRTALICADTFRAGAFDQLKQNAAKVKISFYGSYSEANPAKVAADGVARFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
+E D+IIVDTSGRHKQE ALF+EM+ + +A V PD V+FVMDS IGQA +DQA AF ++
Sbjct: 181 EEKYDMIIVDTSGRHKQEDALFDEMKLIYDA-VQPDEVVFVMDSHIGQACYDQASAFNKA 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V VG+VI+TK+DGHAKGGGALSAV+AT SP+IFIGTGEH D+FE FD K F+SRLLG GD
Sbjct: 240 VDVGSVIITKLDGHAKGGGALSAVSATNSPIIFIGTGEHFDDFEPFDPKSFISRLLGFGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
+G ++ + +V+ ++ +P+LL +++ FT+R MY+QFQN+LKM PIG+V SMLPG E
Sbjct: 300 INGLINTLKDVINLEDKPDLLDRIASAKFTIRDMYDQFQNLLKMAPIGKVMSMLPGIPPE 359
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEML 420
L+ GRE+E +IKR+M +MDSMT+EELD P +N +RIMRIA+GSG E+ ++
Sbjct: 360 LLQAGREQEGVDRIKRFMIIMDSMTDEELDCEKP--LNGTRIMRIAKGSGSSPHEINFLI 417
Query: 421 EEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNA--QHMSKVLPQGMLKQIGGVGGLQNLM 478
+++K L K+ M + + K M + RN N M ++ +L Q+GG G + LM
Sbjct: 418 DQHKTLQKMVGSMGKMGLNKDNAMQNIMRNPNQLLNKMQSMIDPRLLNQMGGAGNIMKLM 477
Query: 479 KQMGSTKDMMGM 490
K+ D+ +
Sbjct: 478 KEFSQNDDLQSL 489
>gi|386697567|gb|AFJ22244.1| signal recognition particle protein 54k, partial [Ingrassia
philomachi]
Length = 444
Score = 539 bits (1389), Expect = e-150, Method: Compositional matrix adjust.
Identities = 267/445 (60%), Positives = 341/445 (76%), Gaps = 10/445 (2%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL+++DV LV++++ N++ +++ D++AAG NKRR+I A+F ELCK+L
Sbjct: 1 LDSLLKEICTALIESDVNIMLVKKLRENVRSVIDFDEMAAGLNKRRMIMMAVFQELCKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG + P KG+ +VIMFVGLQG GKTTTCTK AYY+ KKGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPGVKVWQPVKGRTNVIMFVGLQGIGKTTTCTKMAYYYMKKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA GVE F KEN +++IVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIASGGVEKFTKENFEIVIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAAT 267
+ +A + PDLVI+VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAAT
Sbjct: 181 I-QAAIEPDLVIYVMDASIGQACEAQARAFKNKVDVGAIIVTKLDGHAKGGGALSAVAAT 239
Query: 268 KSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEG 327
KSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E + +D EL++KL G
Sbjct: 240 KSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVNE-LKLDDNEELIEKLKHG 298
Query: 328 NFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNE 387
FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES +++KR MT+MDSM++
Sbjct: 299 EFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDS 358
Query: 388 ELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLK-IPKKGE 443
ELDS KL + +RI+R+ARGSG REV E+L +Y + A + KM G+K + K G+
Sbjct: 359 ELDSREGAKLFSKQPTRIVRVARGSGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGD 418
Query: 444 MSALSRNMNAQHMSKVLPQGMLKQI 468
L++N+N M+K L Q M K I
Sbjct: 419 ---LTKNVNPAQMAK-LNQQMAKMI 439
>gi|403221209|dbj|BAM39342.1| signal recognition particle protein 2 [Theileria orientalis strain
Shintoku]
Length = 495
Score = 539 bits (1388), Expect = e-150, Method: Compositional matrix adjust.
Identities = 260/492 (52%), Positives = 354/492 (71%), Gaps = 5/492 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+L I++A +++ + T+I E V+ E + +I RALL ADV KLV +++ NIK+
Sbjct: 1 MVLAELSTQITQAFRKLHSTTVISEAVIEEVIGDIVRALLMADVNVKLVHKLKENIKRQN 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ G NKRR +Q+ + +EL ML K + P KGKP+VIMFVGLQG+GKTT+CTK
Sbjct: 61 KNNADMIGANKRRYLQKVVVDELVAMLTTEKKPYVPVKGKPNVIMFVGLQGAGKTTSCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
+AY++Q+KGW+ AL+CADTFRAGAFDQLKQNA K KI FYGSY+E++P ++A +GV FK
Sbjct: 121 FAYHYQRKGWRTALICADTFRAGAFDQLKQNAAKVKISFYGSYSEANPAKVAADGVARFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
E D+IIVDTSGRHKQE ALF+EMR + EA V PD V+FVMDS IGQA +DQA AF +
Sbjct: 181 AEKYDMIIVDTSGRHKQEEALFDEMRLIHEA-VQPDEVVFVMDSHIGQACYDQASAFNSA 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V VG+VI+TK+DGHAKGGGALSAV+AT SP+IFIGTGEH D+FE F+ K F+SRLLG GD
Sbjct: 240 VDVGSVIITKLDGHAKGGGALSAVSATNSPIIFIGTGEHFDDFEPFEPKSFISRLLGFGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
+G ++ + +V+ ++ +P+LL +L+ FT+R MY+QFQN+LKM PIG+V SMLPG E
Sbjct: 300 INGLINTLKDVINLEDKPDLLDRLASAKFTIRDMYDQFQNLLKMAPIGKVMSMLPGIPPE 359
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEML 420
L+ GRE+E +IKR+M +MDSMT+EELD P N SR++RIA+GSG ++ +L
Sbjct: 360 LLQAGREQEGVDRIKRFMIIMDSMTDEELDCEKP--FNSSRVLRIAKGSGTSPNDINVLL 417
Query: 421 EEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNA--QHMSKVLPQGMLKQIGGVGGLQNLM 478
E++K L K+ M + + K + L RN N M ++ +L+Q+GG G + LM
Sbjct: 418 EQHKLLQKMVGSMGKMGLTKDNAVQNLMRNPNQLMNKMQSMMDPKILQQMGGPGTIMKLM 477
Query: 479 KQMGSTKDMMGM 490
++ +DM +
Sbjct: 478 REFSQNEDMQSL 489
>gi|386697525|gb|AFJ22223.1| signal recognition particle protein 54k, partial [Passeroptes sp.
AD636]
Length = 460
Score = 538 bits (1387), Expect = e-150, Method: Compositional matrix adjust.
Identities = 267/459 (58%), Positives = 348/459 (75%), Gaps = 8/459 (1%)
Query: 13 AIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKR 72
A++ + NATII+++VL+ L EI +AL+++DV KLV++++ N++ I++ D++AAG NKR
Sbjct: 2 ALRSLGNATIINQEVLDNLLKEICKALIESDVNIKLVKKLRENVRSIIDFDEMAAGLNKR 61
Query: 73 RIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKP 132
R+I A+F EL K+LDP + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKGWK
Sbjct: 62 RMIMMAVFQELVKLLDPEVKPWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKGWKC 121
Query: 133 ALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTS 192
ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +IIVDTS
Sbjct: 122 ALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFQIIIVDTS 181
Query: 193 GRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMD 252
GRHKQE++LFEEM + +A + P+L+++VMD+SIGQA QA+AFK V VGA+IVTK+D
Sbjct: 182 GRHKQESSLFEEMLAI-QAAIQPNLIVYVMDASIGQACESQARAFKNKVDVGAIIVTKLD 240
Query: 253 GHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVV 312
GHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK+ E +
Sbjct: 241 GHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVSE-L 299
Query: 313 PMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQA 372
+D+ EL++KL G FT+R MYEQ N +KMGPI Q+ SM+PGF +EL E ES +
Sbjct: 300 KLDENEELIEKLKHGEFTIRDMYEQITNFMKMGPINQILSMIPGFGAELAQCTSEAESMS 359
Query: 373 KIKRYMTMMDSMTNEELDSSN-PKLM--NDSRIMRIARGSGRQVREVMEMLEEYKRLAKI 429
++KR MT+MDSM++ ELD+ + KL +R R++RG+G R+V ++L +Y + +
Sbjct: 360 RLKRMMTIMDSMSDTELDARDGTKLFYKQPNRFSRVSRGAGVTQRDVQDLLSQYNKFKAV 419
Query: 430 WSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
+M G+K KG L++N+N M K L Q M K I
Sbjct: 420 VKRMGGIKGLFKG--GDLNKNVNPTQMLK-LNQQMAKMI 455
>gi|386697115|gb|AFJ22018.1| signal recognition particle protein 54k, partial [Myanoetus sp.
AD832]
Length = 449
Score = 538 bits (1387), Expect = e-150, Method: Compositional matrix adjust.
Identities = 263/451 (58%), Positives = 346/451 (76%), Gaps = 9/451 (1%)
Query: 13 AIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKR 72
AI + NAT+I+++VL+ L EI AL++ADV LV++++ N++ +++ D++AAG NKR
Sbjct: 2 AIWSLGNATVINQEVLDNMLKEICSALIEADVNILLVKKLRENVRSVIDFDEMAAGLNKR 61
Query: 73 RIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKP 132
R+I A+F ELCK+LDPG + P +G+ +V+MFVGLQG GKTTT TK AYY+ K+GWK
Sbjct: 62 RMIMMAVFTELCKLLDPGVKQWAPVRGRTNVVMFVGLQGIGKTTTVTKMAYYYMKRGWKC 121
Query: 133 ALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTS 192
ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA +GV F+KEN +++IVDTS
Sbjct: 122 ALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVIIAADGVNKFQKENFEIVIVDTS 181
Query: 193 GRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMD 252
GRHKQE +LFEEM + AT +PDLV++VMD+SIGQA QA+AFK V +GA+IVTK+D
Sbjct: 182 GRHKQENSLFEEMLAIQAAT-SPDLVVYVMDASIGQACEAQAKAFKSKVDIGAIIVTKLD 240
Query: 253 GHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVV 312
GHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E +
Sbjct: 241 GHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE-L 299
Query: 313 PMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQA 372
++ EL++KL G FTLR MYEQ NI+KMGP Q+ +M+PGF E+ E ES A
Sbjct: 300 KLEDNEELIEKLKHGEFTLRDMYEQLTNIMKMGPFNQILNMIPGFGPEMSKCTSEAESAA 359
Query: 373 KIKRYMTMMDSMTNEELDS-SNPKLMN--DSRIMRIARGSGRQVREVMEMLEEYKRLAKI 429
++KR MT+MDSM++ ELDS KL N +RI R+ARGSG R+V E+L +Y + A++
Sbjct: 360 RLKRMMTIMDSMSDNELDSREGAKLFNRQPNRIARVARGSGVWRRDVQELLSQYTKFAQM 419
Query: 430 WSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 459
KM G+K + K G+ ++N+N M+K+
Sbjct: 420 VKKMGGMKGLFKPGD---FAKNVNPMQMAKL 447
>gi|386697113|gb|AFJ22017.1| signal recognition particle protein 54k, partial [Pelzneria sp.
AD974]
Length = 449
Score = 538 bits (1387), Expect = e-150, Method: Compositional matrix adjust.
Identities = 264/451 (58%), Positives = 345/451 (76%), Gaps = 9/451 (1%)
Query: 13 AIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKR 72
AI+ + NAT+I+++VL+ L EI AL++ADV LV++++ N++ I++ D++AAG NKR
Sbjct: 2 AIRSLGNATVINQEVLDNMLKEICAALIEADVNIMLVKKLRENVRNIIDFDEMAAGLNKR 61
Query: 73 RIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKP 132
R+I A+F ELCK+LDPG + P KG+ +V+MFVGLQG GKTTT TK AYY+ K+GWK
Sbjct: 62 RMIMMAVFQELCKLLDPGVKQWAPVKGRTNVVMFVGLQGIGKTTTVTKMAYYYMKRGWKC 121
Query: 133 ALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTS 192
ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA +GV F KEN +++IVDTS
Sbjct: 122 ALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVIIAADGVNKFAKENFEIVIVDTS 181
Query: 193 GRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMD 252
GRHKQE +LFEEM + AT +PDL ++VMD+SIGQA QA+AFK V +GA+IVTK+D
Sbjct: 182 GRHKQENSLFEEMLAIQAAT-SPDLCVYVMDASIGQACEAQAKAFKSKVDIGAIIVTKLD 240
Query: 253 GHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVV 312
GHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E +
Sbjct: 241 GHAKGGGALSAVAATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE-L 299
Query: 313 PMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQA 372
++ EL++KL G FTLR MYEQ NI+KMGP Q+ +M+PGF E+ E ES A
Sbjct: 300 KLEDNEELIEKLKHGEFTLRDMYEQLTNIMKMGPFNQILNMIPGFGPEISKCTSEAESAA 359
Query: 373 KIKRYMTMMDSMTNEELDS-SNPKLMN--DSRIMRIARGSGRQVREVMEMLEEYKRLAKI 429
++KR MT+MDSM++ ELDS KL N +RI R+ARGSG R+V E+L +Y + A++
Sbjct: 360 RLKRMMTIMDSMSDNELDSREGAKLFNRQPNRIARVARGSGVWRRDVQELLSQYTKFAQM 419
Query: 430 WSKMKGLK-IPKKGEMSALSRNMNAQHMSKV 459
KM G+K + K G+ ++N+N M+K+
Sbjct: 420 VKKMGGMKGLFKPGD---FAKNVNPMQMAKL 447
>gi|386697253|gb|AFJ22087.1| signal recognition particle protein 54k, partial [Alcedinectes
alcyon]
Length = 458
Score = 538 bits (1386), Expect = e-150, Method: Compositional matrix adjust.
Identities = 263/460 (57%), Positives = 351/460 (76%), Gaps = 10/460 (2%)
Query: 13 AIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKR 72
A++ + NA II+++VL+ L EI AL+++DV LV++++ N++ +++ D++AAG NKR
Sbjct: 2 ALRSLGNAPIINQEVLDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGLNKR 61
Query: 73 RIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKP 132
R+I A+F EL ++LDPG + P KG+ +VIMFVGLQG GKTTTCTK AYY+ +KGWK
Sbjct: 62 RMIMMAVFKELVRLLDPGVKVWQPVKGRTNVIMFVGLQGIGKTTTCTKMAYYYMRKGWKC 121
Query: 133 ALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTS 192
ALVCADTFRAGAFDQLKQNATKA+IPF+GSYTESDPV IA EGVE F EN +++IVDTS
Sbjct: 122 ALVCADTFRAGAFDQLKQNATKARIPFFGSYTESDPVVIASEGVEKFTNENFEIVIVDTS 181
Query: 193 GRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMD 252
GRHKQE++LFEEM + +A + P+LV++VMD+SIGQA QA+AFK V VGA+I+TK+D
Sbjct: 182 GRHKQESSLFEEMLAI-QAAIQPNLVVYVMDASIGQACEAQAKAFKSKVDVGAIIITKLD 240
Query: 253 GHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVV 312
GHAKGGGALSAVAAT SP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E +
Sbjct: 241 GHAKGGGALSAVAATNSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVNE-L 299
Query: 313 PMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQA 372
++ EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES +
Sbjct: 300 KLEDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAESMS 359
Query: 373 KIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKI 429
++KR MT+MDSM++ ELDS KL + +RI+R+ARG+G REV E+L +Y + A +
Sbjct: 360 RLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVARGAGVMQREVQELLSQYTKFAAV 419
Query: 430 WSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 420 VKKMGGIKGLFKSGD---LTKNVNPAQMAK-LNQQMAKMI 455
>gi|386697335|gb|AFJ22128.1| signal recognition particle protein 54k, partial [Hieracolichus
nisi]
Length = 444
Score = 537 bits (1384), Expect = e-150, Method: Compositional matrix adjust.
Identities = 264/445 (59%), Positives = 343/445 (77%), Gaps = 10/445 (2%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL+++DV LV++++ N++ +++ D++AAG NKR++I A+F L K+L
Sbjct: 1 LDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGLNKRKMIMTAVFRNLVKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG P++ P KGK +VIMFVGLQG GKTTTCTK AYY+ KKGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPGVPAWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIASEGVEKFSKENFEIVIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAAT 267
+ +A + P+LV++VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAAT
Sbjct: 181 I-QAAIQPNLVVYVMDASIGQACESQARAFKNKVDVGAIIVTKLDGHAKGGGALSAVAAT 239
Query: 268 KSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEG 327
KSP+IFIGTGEH+DEFE F+V+PF+S+LLGMGD G +DK++E + +D EL++KL G
Sbjct: 240 KSPIIFIGTGEHIDEFEPFEVEPFISKLLGMGDIKGLIDKVNE-LKLDDNEELIEKLKHG 298
Query: 328 NFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNE 387
FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES +++KR MT+MDSM++
Sbjct: 299 EFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDS 358
Query: 388 ELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLK-IPKKGE 443
ELDS KL + +RI+R+ARGSG REV E+L +Y + A + KM G+K + K G+
Sbjct: 359 ELDSREGAKLFSKQPTRIIRVARGSGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGD 418
Query: 444 MSALSRNMNAQHMSKVLPQGMLKQI 468
L++N+N M+K L Q M K I
Sbjct: 419 ---LTKNVNPAQMAK-LNQQMAKMI 439
>gi|386697323|gb|AFJ22122.1| signal recognition particle protein 54k, partial [Gabucinia
delibata]
Length = 444
Score = 537 bits (1383), Expect = e-150, Method: Compositional matrix adjust.
Identities = 263/445 (59%), Positives = 343/445 (77%), Gaps = 10/445 (2%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL+++DV LV++++ N++ +++ D++AAG NKR++I A+F L K+L
Sbjct: 1 LDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGLNKRKMIMTAVFRNLVKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG P++ P KGK +VIMFVGLQG GKTTTCTK AYY+ KKGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPGVPAWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIASEGVEKFSKENFEIVIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAAT 267
+ +A + P+LV++VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAAT
Sbjct: 181 I-QAAIQPNLVVYVMDASIGQACESQARAFKNKVDVGAIIVTKLDGHAKGGGALSAVAAT 239
Query: 268 KSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEG 327
KSP+IFIGTGEH+DEFE F+V+PF+S+LLGMGD G +DK++E + +D EL++KL G
Sbjct: 240 KSPIIFIGTGEHIDEFEPFEVEPFISKLLGMGDIKGLIDKVNE-LKLDDNEELIEKLKHG 298
Query: 328 NFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNE 387
FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES +++KR MT+MDSM++
Sbjct: 299 EFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDS 358
Query: 388 ELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLK-IPKKGE 443
ELDS KL + +RI+R+ARGSG REV E+L +Y + A + KM G+K + + G+
Sbjct: 359 ELDSREGAKLFSKQPTRIVRVARGSGVTQREVQELLSQYTKFAAVVKKMGGIKGLFRSGD 418
Query: 444 MSALSRNMNAQHMSKVLPQGMLKQI 468
L++N+N M+K L Q M K I
Sbjct: 419 ---LAKNVNPAQMAK-LNQQMAKMI 439
>gi|386697529|gb|AFJ22225.1| signal recognition particle protein 54k, partial [Passeroptes sp.
AD882]
Length = 460
Score = 536 bits (1382), Expect = e-150, Method: Compositional matrix adjust.
Identities = 267/459 (58%), Positives = 346/459 (75%), Gaps = 8/459 (1%)
Query: 13 AIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKR 72
A++ + NATII+++VL+ L EI +AL+++DV KLV+ ++ N++ I++ D++AAG NKR
Sbjct: 2 ALRSLGNATIINQEVLDNLLKEICKALIESDVNIKLVKNLRENVRSIIDFDEMAAGLNKR 61
Query: 73 RIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKP 132
R+I A+F EL K+LDP + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKGWK
Sbjct: 62 RMIMMAVFQELVKLLDPEVKPWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKGWKC 121
Query: 133 ALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTS 192
ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +IIVDTS
Sbjct: 122 ALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFQIIIVDTS 181
Query: 193 GRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMD 252
GRHKQE++LFEEM + +A + P+L+++VMD+SIGQA QA+AFK V VGA+IVTK+D
Sbjct: 182 GRHKQESSLFEEMLAI-QAAIQPNLIVYVMDASIGQACESQARAFKDKVDVGAIIVTKLD 240
Query: 253 GHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVV 312
GHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK+ E +
Sbjct: 241 GHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVSE-L 299
Query: 313 PMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQA 372
+D+ EL++KL G FT+R MYEQ N +KMGPI Q+ SM+PGF +EL E ES +
Sbjct: 300 KLDENDELIEKLKHGEFTIRDMYEQITNFMKMGPINQILSMIPGFGAELAQCTSEAESMS 359
Query: 373 KIKRYMTMMDSMTNEELDSSN-PKLM--NDSRIMRIARGSGRQVREVMEMLEEYKRLAKI 429
++KR MT+MDSM++ ELD+ + KL R R++RG+G R+V E+L +Y + +
Sbjct: 360 RLKRMMTIMDSMSDTELDARDGTKLFYKQPKRFFRVSRGAGVTPRDVQELLGQYNKFRAV 419
Query: 430 WSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
+M G+K +G L++N+N M K L Q M K I
Sbjct: 420 VKRMGGIKGLFRG--GDLNKNVNPTQMLK-LNQQMAKMI 455
>gi|386697255|gb|AFJ22088.1| signal recognition particle protein 54k, partial [Hypodectes sp.
AD946]
Length = 459
Score = 536 bits (1381), Expect = e-150, Method: Compositional matrix adjust.
Identities = 261/460 (56%), Positives = 352/460 (76%), Gaps = 10/460 (2%)
Query: 13 AIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKR 72
A++ + NATII+++VL+ L EI AL+++DV LV+ ++ N++ +++ D++AAG NKR
Sbjct: 2 ALRSLGNATIINQEVLDSLLKEICTALIESDVNIMLVKRLRENVRSVIDFDEMAAGLNKR 61
Query: 73 RIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKP 132
R+I A+F EL ++LDPG ++ P KG+ +VIMFVGLQG GKTTTCTK AYY+ +KGWK
Sbjct: 62 RMIMMAVFKELGRLLDPGVKAWQPVKGRTNVIMFVGLQGIGKTTTCTKMAYYYLRKGWKC 121
Query: 133 ALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTS 192
ALVCADTFRAGAFDQLKQNATKA+IPF+GSYTESDPV IA EGVE F EN +++IVDTS
Sbjct: 122 ALVCADTFRAGAFDQLKQNATKARIPFFGSYTESDPVVIASEGVEKFTNENFEIVIVDTS 181
Query: 193 GRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMD 252
GRHKQE++LFEEM + +A + P+L+++VMD+SIGQA QA+AFK V VGA+I+TK+D
Sbjct: 182 GRHKQESSLFEEMLAI-QAAIQPNLIVYVMDASIGQACEAQAKAFKSKVDVGAIIITKLD 240
Query: 253 GHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVV 312
GHAKGGGALSAVAAT SP+IFIGTGEH+DEFE F+VK F+S+LLGMGD G +DK++E +
Sbjct: 241 GHAKGGGALSAVAATNSPIIFIGTGEHIDEFEQFNVKSFISKLLGMGDIEGLIDKVNE-L 299
Query: 313 PMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQA 372
++ EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES +
Sbjct: 300 KLEDNEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAESMS 359
Query: 373 KIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKI 429
++KR MT+MDSM++ ELDS KL + +RI+R+ARG+G +EV E+L +Y + A +
Sbjct: 360 RLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVARGAGVMQKEVQELLSQYTKFAAV 419
Query: 430 WSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 420 VKKMGGIKGLFKSGD---LTKNVNPAQMAK-LNQQMAKMI 455
>gi|386697523|gb|AFJ22222.1| signal recognition particle protein 54k, partial [Neodermation sp.
AD858]
Length = 459
Score = 536 bits (1381), Expect = e-150, Method: Compositional matrix adjust.
Identities = 266/459 (57%), Positives = 350/459 (76%), Gaps = 9/459 (1%)
Query: 13 AIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKR 72
A++ + NATII+++VL+ L EI AL+++DV LV++++ N++K+++ +++AAG NKR
Sbjct: 2 ALRSLGNATIINQEVLDNLLKEICTALIESDVNILLVKQLRENVRKVIDFEEMAAGLNKR 61
Query: 73 RIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKP 132
R+I A+F EL K+LDP ++ P KGK +V+MFVGLQG GKTTTCTK AYY+ KKGWK
Sbjct: 62 RMIMMAVFQELVKLLDPEVKAWQPVKGKTNVVMFVGLQGIGKTTTCTKMAYYYMKKGWKC 121
Query: 133 ALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTS 192
ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +IIVDTS
Sbjct: 122 ALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFQIIIVDTS 181
Query: 193 GRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMD 252
GRHKQE++LFEEM + +A + PDLV++VMD+SIGQA QA+AFK V VGA+IVTK+D
Sbjct: 182 GRHKQESSLFEEMLAI-QAAIQPDLVVYVMDASIGQACEAQAKAFKNKVDVGAIIVTKLD 240
Query: 253 GHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVV 312
GHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G MDK+ ++
Sbjct: 241 GHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLMDKVSQLK 300
Query: 313 PMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQA 372
D + EL++KL G FT+R MYEQ N +KMGP+ Q+ +M+PG +EL E ES A
Sbjct: 301 LGDNE-ELIEKLKHGEFTIRDMYEQITNFMKMGPLNQILNMIPGIGAELAKCTSEAESYA 359
Query: 373 KIKRYMTMMDSMTNEELDSSN-PKLM--NDSRIMRIARGSGRQVREVMEMLEEYKRLAKI 429
++KR MT+MDSM++ ELDS + KL +R++R++RG+G REV+E++ +Y + +
Sbjct: 360 RLKRMMTIMDSMSDSELDSRDGGKLFAKQPTRVLRVSRGAGVTQREVIELISQYTKFKAV 419
Query: 430 WSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
KM G+K KG+ LS+++N +K L Q M K I
Sbjct: 420 VKKMGGIKGLFKGD---LSKSINPLQFAK-LNQQMAKII 454
>gi|386697143|gb|AFJ22032.1| signal recognition particle protein 54k, partial [Nanacarus sp.
AD545]
Length = 447
Score = 536 bits (1381), Expect = e-149, Method: Compositional matrix adjust.
Identities = 255/439 (58%), Positives = 339/439 (77%), Gaps = 6/439 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV +LV++++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDSLLKEICSALIESDVNIRLVKQLRENVRNVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A++ ELCK++DPG ++ P KG+ +V+MFVGLQG GKTTTCTK AY++ +KG
Sbjct: 63 NKRRMIMMAVYQELCKLIDPGVKAWQPVKGRSNVVMFVGLQGIGKTTTCTKLAYHYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
W+ ALVCADTFRAGAFDQLKQNATKA+IPFYGSY ESDPV IA EGV+ F EN D+IIV
Sbjct: 123 WRCALVCADTFRAGAFDQLKQNATKARIPFYGSYVESDPVVIAAEGVDKFTNENFDIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM +S A V PDL+I+VMD+SIGQA QA+AF V VGAVIVT
Sbjct: 183 DTSGRHKQESSLFEEMLAISTA-VQPDLIIYVMDASIGQACEAQARAFSSKVDVGAVIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAATKSP+IFIGTGEH++EFE F KPF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATKSPIIFIGTGEHINEFEQFKAKPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E + +D+ +L+ KL G FTLR MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 E-LKLDENDQLIDKLKHGEFTLRDMYEQLANIMKMGPFSQILNMIPGFGAELSNCTSEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDSSNPK---LMNDSRIMRIARGSGRQVREVMEMLEEYKRL 426
S +K+KR MT+MDSM++ ELDS + L +R+ R+ARG+G EV E+L ++ +
Sbjct: 361 SMSKLKRMMTIMDSMSDGELDSRDGSKLFLKQPTRVARVARGAGMTRAEVKELLTQFTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEM 444
A + KM G+K + K G+M
Sbjct: 421 AAVVKKMGGIKGLFKSGDM 439
>gi|386697205|gb|AFJ22063.1| signal recognition particle protein 54k, partial [Horstia glabra]
Length = 444
Score = 536 bits (1380), Expect = e-149, Method: Compositional matrix adjust.
Identities = 265/445 (59%), Positives = 342/445 (76%), Gaps = 10/445 (2%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL+++DV +LV++++ N++ +++ D++AAG NKRR+I A+FNEL K+L
Sbjct: 1 LDNMLKEICAALIESDVNIQLVKKLRENVRSVIDFDEMAAGLNKRRMIMMAVFNELVKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ +KGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPGVKAWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYLRKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAAT 267
+S A + P+L+++VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAAT
Sbjct: 181 IS-AAIQPNLIVYVMDASIGQACEAQAKAFKSKVDVGAIIVTKLDGHAKGGGALSAVAAT 239
Query: 268 KSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEG 327
SP+IFIGTGEH+DEFE+F VKPF+S+LLGMGD G +DK++E + +D EL++KL G
Sbjct: 240 GSPIIFIGTGEHIDEFELFKVKPFISKLLGMGDIEGLIDKVNE-LKLDDNEELIEKLKHG 298
Query: 328 NFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNE 387
FTLR MYEQ NI+KMGP Q+ +M+PGF +EL E ES +++KR MT+MDSM +
Sbjct: 299 EFTLRDMYEQLTNIMKMGPFNQILNMIPGFGAELSKCTSEAESMSRLKRMMTIMDSMADS 358
Query: 388 ELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLK-IPKKGE 443
ELDS KL + +RI+RIARGSG REV E+L +Y + A + KM G+K + K G+
Sbjct: 359 ELDSREGTKLFSKQPTRIVRIARGSGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGD 418
Query: 444 MSALSRNMNAQHMSKVLPQGMLKQI 468
L++N+N M+K L Q M + I
Sbjct: 419 ---LAKNVNPAQMAK-LNQQMARMI 439
>gi|326920725|ref|XP_003206619.1| PREDICTED: signal recognition particle 54 kDa protein-like
[Meleagris gallopavo]
Length = 474
Score = 535 bits (1378), Expect = e-149, Method: Compositional matrix adjust.
Identities = 274/505 (54%), Positives = 363/505 (71%), Gaps = 48/505 (9%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNATII+E+VLN L E+ ALL+ADV KLV++++ N
Sbjct: 1 MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLREN----- 55
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++DPG ++TP KGK ++IMFVGLQGSGKTTTC+K
Sbjct: 56 -------------------------LVDPGVKAWTPTKGKQNIIMFVGLQGSGKTTTCSK 90
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++Q+KGWK L+CADT+RAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGVE FK
Sbjct: 91 LAYFYQRKGWKTCLICADTYRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGVEKFK 150
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
EN ++IIVDTSGRHKQE +LFEEM QV+ A + PD +++VMD+SIGQA QA+AFK
Sbjct: 151 NENFEIIIVDTSGRHKQEDSLFEEMLQVANA-IQPDNIVYVMDASIGQACEAQAKAFKDK 209
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V V +VIVTK+DGHAKGGGALSAVAATKSP+IFIGTGEH+D+FE F +PF+S+LLGMGD
Sbjct: 210 VDVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLLGMGD 269
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G +DK++E + +D L++KL G FTLR MYEQFQNI+KMGP Q+ M+PGF ++
Sbjct: 270 IEGLIDKVNE-LKLDDNEALIEKLKHGQFTLRDMYEQFQNIMKMGPFSQILGMIPGFGTD 328
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQVREVM 417
M KG E+ES A++K+ MT+MDSM ++ELDS++ K+ + RI R+ARGSG R+V
Sbjct: 329 FMSKGNEQESMARLKKLMTIMDSMNDQELDSTDGAKVFSKQPGRIQRVARGSGVSTRDVQ 388
Query: 418 EMLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNA-------QHMSKVLPQGMLKQIG 469
E+L +Y + A++ KM G+K + K G+M S+N+N Q M+K++ +L +G
Sbjct: 389 ELLTQYTKFAQMVKKMGGIKGLFKGGDM---SKNVNPSQLAKLNQQMAKMMDPRVLHHMG 445
Query: 470 GVGGLQNLMKQM--GSTKDMMGMFG 492
G+ GLQ++M+Q G+ +M GM G
Sbjct: 446 GMAGLQSMMRQFQQGAAGNMKGMMG 470
>gi|386697547|gb|AFJ22234.1| signal recognition particle protein 54k, partial [Trouessartia sp.
n. AD768]
Length = 444
Score = 535 bits (1378), Expect = e-149, Method: Compositional matrix adjust.
Identities = 264/445 (59%), Positives = 342/445 (76%), Gaps = 10/445 (2%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL+++DV LV++++ N++ +++ D++AAG NKRR+I A+F EL K+L
Sbjct: 1 LDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGLNKRRMIMMAVFKELVKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG ++ P KG+ +VIMFVGLQG GKTTTCTK AYY+ KKGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPGVKAWQPVKGRTNVIMFVGLQGIGKTTTCTKMAYYYMKKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIVIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAAT 267
+ +A + P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAAT
Sbjct: 181 I-QAAIQPNLVIYVMDASIGQACEAQARAFKNKVDVGAIIVTKLDGHAKGGGALSAVAAT 239
Query: 268 KSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEG 327
KSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E + +D EL++KL G
Sbjct: 240 KSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE-LKLDDNEELIEKLKHG 298
Query: 328 NFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNE 387
FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES +++KR MT+MDSM++
Sbjct: 299 EFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDS 358
Query: 388 ELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLK-IPKKGE 443
ELDS KL + +RI+R++RGSG REV E+L +Y + A + KM G+K + K G+
Sbjct: 359 ELDSREGAKLFSKQPTRIVRVSRGSGVTQREVQELLNQYTKFAAVVKKMGGIKGLFKSGD 418
Query: 444 MSALSRNMNAQHMSKVLPQGMLKQI 468
L++N+N M++ L Q M K I
Sbjct: 419 ---LAKNVNPAQMAR-LNQQMAKMI 439
>gi|386697135|gb|AFJ22028.1| signal recognition particle protein 54k, partial [Suidasia
nesbitti]
Length = 433
Score = 534 bits (1376), Expect = e-149, Method: Compositional matrix adjust.
Identities = 259/436 (59%), Positives = 338/436 (77%), Gaps = 9/436 (2%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL+++DV LV++++ N++ +++ D++AAG NKRR+I A+F EL K+L
Sbjct: 1 LDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGLNKRRMIMMAVFKELVKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG ++ P KG+ +VIMFVGLQG GKTTTCTK AYY+Q+KGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPGVKAWQPAKGRTNVIMFVGLQGIGKTTTCTKMAYYYQRKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEVVIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAAT 267
+ +A + P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAAT
Sbjct: 181 I-QAAIQPNLVIYVMDASIGQACEAQARAFKSKVDVGAIIVTKLDGHAKGGGALSAVAAT 239
Query: 268 KSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEG 327
KSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E + +D EL++KL G
Sbjct: 240 KSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE-LKLDDNEELIEKLKHG 298
Query: 328 NFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNE 387
FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES +++KR MT+MDSM++
Sbjct: 299 EFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDS 358
Query: 388 ELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLK-IPKKGE 443
ELDS KL + +RI+R+ARG+G REV E+L +Y + A + KM G+K + K G+
Sbjct: 359 ELDSREGAKLFSKQPTRIVRVARGAGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGD 418
Query: 444 MSALSRNMNAQHMSKV 459
L++N+N M+K+
Sbjct: 419 ---LAKNVNPAQMAKL 431
>gi|386697213|gb|AFJ22067.1| signal recognition particle protein 54k, partial [Acarus siro]
gi|386697215|gb|AFJ22068.1| signal recognition particle protein 54k, partial [Acarus immobilis]
Length = 444
Score = 534 bits (1376), Expect = e-149, Method: Compositional matrix adjust.
Identities = 266/445 (59%), Positives = 340/445 (76%), Gaps = 10/445 (2%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL+++DV LV++++ N++K+++ D++AAG NKRR+I A+F EL K+L
Sbjct: 1 LDNMLKEICAALIESDVNIILVKQLRENVRKVIDFDEMAAGLNKRRMIMMAVFQELVKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG ++ P KGK +VIMFVGLQG GKTTTCTK AY++ KKGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPGVKAWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYHYMKKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIATEGVEKFTNENFEIVIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAAT 267
+S A V P+L+I+VMD+SIGQA QA+AF V VGAVIVTK+DGHAKGGGALSAVAAT
Sbjct: 181 IS-AAVQPNLIIYVMDASIGQACEAQARAFSSKVDVGAVIVTKLDGHAKGGGALSAVAAT 239
Query: 268 KSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEG 327
KSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E + +D EL++KL G
Sbjct: 240 KSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE-LKLDDNEELIEKLKHG 298
Query: 328 NFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNE 387
FTLR MYEQ NI+KMGP Q+ +M+PGF +EL E ES +++KR MT+MDSM +
Sbjct: 299 EFTLRDMYEQLTNIMKMGPFNQILNMIPGFGAELSKCTSEAESMSRLKRMMTIMDSMADS 358
Query: 388 ELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLK-IPKKGE 443
ELDS KL + +RI+R+ARG+G REV E+L +Y + A + KM G+K + K G+
Sbjct: 359 ELDSREGAKLFSKQPTRIVRVARGAGVMTREVQELLSQYTKFAAVVKKMGGIKGLFKTGD 418
Query: 444 MSALSRNMNAQHMSKVLPQGMLKQI 468
L++N+N M+K L Q M + I
Sbjct: 419 ---LAKNVNPAQMAK-LNQQMARMI 439
>gi|386697191|gb|AFJ22056.1| signal recognition particle protein 54k, partial [Nycteriglyphites
pennsylvanicus]
Length = 444
Score = 534 bits (1375), Expect = e-149, Method: Compositional matrix adjust.
Identities = 263/445 (59%), Positives = 341/445 (76%), Gaps = 10/445 (2%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI +AL+++DV LV++++ N++ +++ +++AAG NKRR+I A+F EL K+L
Sbjct: 1 LDSLLKEICKALIESDVNIMLVKKLRENVRSVIDFEEMAAGLNKRRMIMMAVFTELVKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ +KGW+ ALVCADTFRAGAFDQ
Sbjct: 61 DPGVKPWQPVKGKVNVIMFVGLQGIGKTTTCTKMAYYYMRKGWRCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSY ESDPV IA EGVE F KEN +++IVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYAESDPVVIASEGVEKFTKENFEIVIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAAT 267
+S A + P+LV++VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAAT
Sbjct: 181 IS-AAIQPNLVVYVMDASIGQACESQAKAFKSKVDVGAIIVTKLDGHAKGGGALSAVAAT 239
Query: 268 KSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEG 327
KSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E + +D EL++KL G
Sbjct: 240 KSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVNE-LKLDDNEELIEKLKHG 298
Query: 328 NFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNE 387
FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES +++KR MT+MDSM++
Sbjct: 299 EFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELSKCASEAESMSRLKRMMTVMDSMSDS 358
Query: 388 ELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLK-IPKKGE 443
ELDS KL + +RI+R+ARGSG REV E+L +Y + A + KM G+K + K G+
Sbjct: 359 ELDSREGAKLFSKQPTRIVRVARGSGVTTREVQELLSQYTKFAAVVKKMGGIKGLFKSGD 418
Query: 444 MSALSRNMNAQHMSKVLPQGMLKQI 468
L++N+N M+K L Q M K I
Sbjct: 419 ---LAKNVNPAQMAK-LNQQMAKMI 439
>gi|386697487|gb|AFJ22204.1| signal recognition particle protein 54k, partial [Otodectes
cynotis]
Length = 444
Score = 533 bits (1374), Expect = e-149, Method: Compositional matrix adjust.
Identities = 264/445 (59%), Positives = 341/445 (76%), Gaps = 10/445 (2%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL+++DV LV++++ N++ +++ D++AAG NKRR+I +A+F ELCK+L
Sbjct: 1 LDGLLKEICTALIESDVNIMLVKQLRENVRNVIDFDEMAAGLNKRRMIMRAVFQELCKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ KKGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPGVKTWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGVE F EN ++IIVDTSGRHKQE +LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIIIVDTSGRHKQENSLFEEMLA 180
Query: 208 VSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAAT 267
+ +A + DLVI+VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAAT
Sbjct: 181 I-QAAIQSDLVIYVMDASIGQACEPQARAFKAKVDVGAIIVTKLDGHAKGGGALSAVAAT 239
Query: 268 KSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEG 327
KSP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK++E + +D EL++K+ G
Sbjct: 240 KSPIIFIGTGEHIDEFESFKVRPFISKLLGMGDIEGLIDKVNE-LKLDDNEELIEKIKHG 298
Query: 328 NFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNE 387
FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES +++KR MT+MDSM++
Sbjct: 299 EFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDS 358
Query: 388 ELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLK-IPKKGE 443
ELDS KL + +RI+R++RG+G REV E+L +Y + A + KM G+K + K G+
Sbjct: 359 ELDSREGAKLFSKQPTRIVRVSRGAGCTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGD 418
Query: 444 MSALSRNMNAQHMSKVLPQGMLKQI 468
L++N+N M+K L Q M K I
Sbjct: 419 ---LAKNVNPAQMAK-LNQQMAKMI 439
>gi|386697221|gb|AFJ22071.1| signal recognition particle protein 54k, partial [Sancassania aff.
sphaerogaster AD361]
Length = 433
Score = 533 bits (1374), Expect = e-149, Method: Compositional matrix adjust.
Identities = 260/436 (59%), Positives = 336/436 (77%), Gaps = 9/436 (2%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL+++DV LV++++ N++ +++ D++AAG NKRR+I A+F EL K+L
Sbjct: 1 LDNMLKEICAALIESDVNIVLVKQLRENVRSVIDFDEMAAGLNKRRMIMMAVFKELVKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ +KGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPGVKAYQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMRKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEVVIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAAT 267
+S A V P +++VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAAT
Sbjct: 181 IS-AAVQPQQIVYVMDASIGQACEAQARAFKSKVDVGAIIVTKLDGHAKGGGALSAVAAT 239
Query: 268 KSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEG 327
KSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E + +D EL++KL G
Sbjct: 240 KSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVNE-LKLDDNEELIEKLKHG 298
Query: 328 NFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNE 387
FTLR MYEQ NI+KMGP Q+ +M+PGF +EL E ES +++KR MT+MDSM++
Sbjct: 299 EFTLRDMYEQLTNIMKMGPFNQILNMIPGFGAELSKCTSEAESMSRLKRMMTIMDSMSDS 358
Query: 388 ELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLK-IPKKGE 443
ELDS KL + +RI+R+ARG+G REV E+L +Y + A + KM G+K + K G+
Sbjct: 359 ELDSREGAKLFSKQPTRIVRVARGAGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGD 418
Query: 444 MSALSRNMNAQHMSKV 459
L++N+N M+K+
Sbjct: 419 ---LTKNVNPSQMAKL 431
>gi|386697479|gb|AFJ22200.1| signal recognition particle protein 54k, partial [Paralgopsis sp.
AD1163]
Length = 444
Score = 533 bits (1373), Expect = e-149, Method: Compositional matrix adjust.
Identities = 265/445 (59%), Positives = 341/445 (76%), Gaps = 10/445 (2%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL+++DV LV++++ N++++++ D++AAG NKRR+I A+F EL K+L
Sbjct: 1 LDGLLKEICTALIESDVNIMLVKQLRENVRRVIDFDEMAAGLNKRRMIMMAVFQELVKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DP + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPEVKVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAAT 267
+ +A + P+LVI+VMD+SIGQA QA+AFKQ V VGA+IVTK+DGHAKGGGALSAVAAT
Sbjct: 181 I-QAAIQPNLVIYVMDASIGQACEAQAKAFKQKVDVGAIIVTKLDGHAKGGGALSAVAAT 239
Query: 268 KSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEG 327
KSP+IFIGTGEH+DEFE F V+PFVS+LLGMGD G +DK++E + +D EL++KL G
Sbjct: 240 KSPIIFIGTGEHIDEFEPFKVRPFVSKLLGMGDIEGLIDKVNE-LKLDDNEELIEKLKHG 298
Query: 328 NFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNE 387
FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES +++KR MT+MDSM++
Sbjct: 299 EFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDS 358
Query: 388 ELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLK-IPKKGE 443
ELDS KL + +R++R+ARGSG REV E+L +Y + A + KM G+K + K G+
Sbjct: 359 ELDSREGAKLFSKQPTRLVRVARGSGVSQREVQELLSQYTKFAAVVKKMGGIKGLFKSGD 418
Query: 444 MSALSRNMNAQHMSKVLPQGMLKQI 468
L++N+N M+K L Q M K I
Sbjct: 419 ---LTKNVNPAQMAK-LNQQMAKMI 439
>gi|386697401|gb|AFJ22161.1| signal recognition particle protein 54k, partial [Neumannia sp.
AD1196]
Length = 444
Score = 533 bits (1372), Expect = e-148, Method: Compositional matrix adjust.
Identities = 265/445 (59%), Positives = 340/445 (76%), Gaps = 10/445 (2%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL+++DV LV++++ N++ +++ D++AAG NKRR+I A+F EL K+L
Sbjct: 1 LDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGLNKRRMIMMAVFKELVKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DP + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPEVKVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIVIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAAT 267
+ +A + P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAAT
Sbjct: 181 I-QAAIQPNLVIYVMDASIGQACEAQARAFKNKVDVGAIIVTKLDGHAKGGGALSAVAAT 239
Query: 268 KSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEG 327
KSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E + +D EL++KL G
Sbjct: 240 KSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE-LKLDDNEELIEKLKHG 298
Query: 328 NFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNE 387
FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES ++KR MT+MDSM++
Sbjct: 299 EFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAESMHRLKRMMTIMDSMSDS 358
Query: 388 ELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLK-IPKKGE 443
ELDS KL + +RI+R++RG+G REV E+L +Y + A + KM G+K + K G+
Sbjct: 359 ELDSREGAKLFSKQPTRIVRVSRGAGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGD 418
Query: 444 MSALSRNMNAQHMSKVLPQGMLKQI 468
L++N+NA M+K L Q M K I
Sbjct: 419 ---LAKNVNASQMAK-LNQQMAKMI 439
>gi|386697181|gb|AFJ22051.1| signal recognition particle protein 54k, partial [aff. Alabidopus
sp. AD591]
Length = 433
Score = 533 bits (1372), Expect = e-148, Method: Compositional matrix adjust.
Identities = 261/436 (59%), Positives = 338/436 (77%), Gaps = 9/436 (2%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL+++DV LV++++ N++ +++ D++AAG NKRR+I A+F EL K+L
Sbjct: 1 LDNMLKEICAALIESDVNIMLVKKLRENVRSVIDFDEMAAGLNKRRMIMMAVFQELVKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG ++TP KGK +VIMFVGLQG GKTTTCTK AY++ +KGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPGVKAWTPVKGKTNVIMFVGLQGIGKTTTCTKMAYHYMRKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAAT 267
+S A V P+L+I+VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAAT
Sbjct: 181 IS-AAVQPNLIIYVMDASIGQACEAQARAFKSKVDVGAIIVTKLDGHAKGGGALSAVAAT 239
Query: 268 KSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEG 327
KSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E + ++ EL++KL G
Sbjct: 240 KSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE-LKLEDNEELIEKLKHG 298
Query: 328 NFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNE 387
FTLR MYEQ NI+KMGP Q+ +M+PGF +EL E ES +++KR MT+MDSM +
Sbjct: 299 EFTLRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKGTSEAESMSRLKRMMTIMDSMADS 358
Query: 388 ELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLK-IPKKGE 443
ELDS KL + +RI+RIARGSG REV E+L +Y + A++ KM G+K + K G+
Sbjct: 359 ELDSREGAKLFSKQPTRIVRIARGSGVTQREVQELLSQYTKFAQVVKKMGGIKGLFKSGD 418
Query: 444 MSALSRNMNAQHMSKV 459
L++N+N M+++
Sbjct: 419 ---LAKNVNPAQMARL 431
>gi|386697171|gb|AFJ22046.1| signal recognition particle protein 54k, partial [Chaetodactylus
lithurgi]
Length = 431
Score = 533 bits (1372), Expect = e-148, Method: Compositional matrix adjust.
Identities = 260/436 (59%), Positives = 336/436 (77%), Gaps = 9/436 (2%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI +AL+++DV LV++++ N++ +++ +++AAG NKRR+I A+F EL ++L
Sbjct: 1 LDSLLKEICKALIESDVNIMLVKQLRENVRSVIDFEEMAAGLNKRRMIMMAVFKELVRLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ +KGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPGVKPWQPIKGKTNVIMFVGLQGIGKTTTCTKMAYYYMRKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IVDTSGRHKQE +LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIVIVDTSGRHKQENSLFEEMLA 180
Query: 208 VSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAAT 267
+S A V P+L+++VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAAT
Sbjct: 181 IS-AAVQPNLIVYVMDASIGQACEAQAKAFKSKVDVGAIIVTKLDGHAKGGGALSAVAAT 239
Query: 268 KSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEG 327
KSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E + +D EL++KL G
Sbjct: 240 KSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVNE-LKLDDNEELIEKLKHG 298
Query: 328 NFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNE 387
FTLR MYEQ NI+KMGP Q+ +M+PGF +EL E ES +++KR MT+MDSM++
Sbjct: 299 EFTLRDMYEQLTNIMKMGPFNQILNMIPGFGAELSKCASEAESMSRLKRMMTIMDSMSDS 358
Query: 388 ELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLK-IPKKGE 443
ELDS KL + +RI+R+ARGSG REV E+L +Y + A + KM G+K + K G+
Sbjct: 359 ELDSREGAKLFSKQPTRIIRVARGSGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGD 418
Query: 444 MSALSRNMNAQHMSKV 459
L++N+N M K+
Sbjct: 419 ---LAKNVNPAQMXKL 431
>gi|386697611|gb|AFJ22266.1| signal recognition particle protein 54k, partial [Monojoubertia
hemiphylla]
Length = 433
Score = 533 bits (1372), Expect = e-148, Method: Compositional matrix adjust.
Identities = 260/436 (59%), Positives = 337/436 (77%), Gaps = 9/436 (2%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL+++DV LV++++ N++ +++ D++AAG NKRR+I A+F EL K+L
Sbjct: 1 LDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGLNKRRMIMMAVFKELVKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPGVKVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGVE F KEN ++IIVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIIIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAAT 267
+ +A + P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAAT
Sbjct: 181 I-QAAIQPNLVIYVMDASIGQACEAQAKAFKNKVDVGAIIVTKLDGHAKGGGALSAVAAT 239
Query: 268 KSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEG 327
KSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E + +D EL++KL G
Sbjct: 240 KSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE-LKLDDNEELIEKLKHG 298
Query: 328 NFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNE 387
FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES +++KR MT+MDSM++
Sbjct: 299 EFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDS 358
Query: 388 ELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLK-IPKKGE 443
ELDS KL + +R++R++RG+G REV E+L +Y + A + KM G+K + K G+
Sbjct: 359 ELDSREGAKLFSKQPTRLVRVSRGAGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKTGD 418
Query: 444 MSALSRNMNAQHMSKV 459
L++N+N+ M K+
Sbjct: 419 ---LTKNVNSAQMLKL 431
>gi|386697459|gb|AFJ22190.1| signal recognition particle protein 54k, partial [Mesalgoides sp.
n. AD747]
Length = 444
Score = 533 bits (1372), Expect = e-148, Method: Compositional matrix adjust.
Identities = 265/445 (59%), Positives = 341/445 (76%), Gaps = 10/445 (2%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL+++DV LV++++ N++++++ D++AAG NKRR+I A+F EL K+L
Sbjct: 1 LDGLLKEICTALIESDVNIMLVKQLRENVRRVIDFDEMAAGLNKRRMIMMAVFQELVKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DP + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPEVKVWQPIKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAAT 267
+ +A + P+LVI+VMD+SIGQA QA+AFKQ V VGA+IVTK+DGHAKGGGALSAVAAT
Sbjct: 181 I-QAAIQPNLVIYVMDASIGQACEAQAKAFKQKVDVGAIIVTKLDGHAKGGGALSAVAAT 239
Query: 268 KSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEG 327
KSP+IFIGTGEH+DEFE F V+PFVS+LLGMGD G +DK++E + +D EL++KL G
Sbjct: 240 KSPIIFIGTGEHIDEFEPFKVRPFVSKLLGMGDIEGLIDKVNE-LKLDDNEELIEKLKHG 298
Query: 328 NFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNE 387
FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES +++KR MT+MDSM++
Sbjct: 299 EFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDS 358
Query: 388 ELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLK-IPKKGE 443
ELDS KL + +R++R+ARGSG REV E+L +Y + A + KM G+K + K G+
Sbjct: 359 ELDSREGAKLFSKQPTRLVRVARGSGVSQREVQELLSQYTKFAAVVKKMGGIKGLFKSGD 418
Query: 444 MSALSRNMNAQHMSKVLPQGMLKQI 468
L++N+N M+K L Q M K I
Sbjct: 419 ---LTKNVNPAQMAK-LNQQMAKMI 439
>gi|145351050|ref|XP_001419900.1| IISP family transporter: Signal recognition particle 54 kDa protein
(SRP54) [Ostreococcus lucimarinus CCE9901]
gi|144580133|gb|ABO98193.1| IISP family transporter: Signal recognition particle 54 kDa protein
(SRP54) [Ostreococcus lucimarinus CCE9901]
Length = 513
Score = 533 bits (1372), Expect = e-148, Method: Compositional matrix adjust.
Identities = 265/513 (51%), Positives = 367/513 (71%), Gaps = 22/513 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A++ ++ ++DE++L+ CL +IT ALL +DV LV M+ NI + V
Sbjct: 1 MVLNDLGNKIASALRSLNAHVVVDEELLDACLKDITNALLASDVAVPLVVRMKKNIVREV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPG-------------KPSFTPKKGKPSVIMFV 107
+LD++A+G N ++++++A+F EL +L+ G ++TPKKGK +V+MFV
Sbjct: 61 DLDNMASGMNAKKVLERAVFKELTALLNGGGDASGTKTSGTKTSGTWTPKKGKRNVVMFV 120
Query: 108 GLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESD 167
GLQG+GKTTTCTK+A+Y+ KKG+KP+LVCADTFRAGAFDQLKQNATKAKIPFYGSYTESD
Sbjct: 121 GLQGAGKTTTCTKFAHYYAKKGFKPSLVCADTFRAGAFDQLKQNATKAKIPFYGSYTESD 180
Query: 168 PVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIG 227
P IA GV+ F++E DLIIVDTSGRHKQE ALFEEMR+++ T P + IFVMDSSIG
Sbjct: 181 PATIAAAGVKRFEEEKSDLIIVDTSGRHKQEEALFEEMREIASVT-EPTMTIFVMDSSIG 239
Query: 228 QAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFD 287
Q+A DQA+AF +V VG VI+TK+DGHAKGGGA+SAV+ TK+P++FIGTGEH+ E E F+
Sbjct: 240 QSASDQAKAFASTVDVGGVIMTKLDGHAKGGGAISAVSETKAPILFIGTGEHIGELEAFE 299
Query: 288 VKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPI 347
FVS+LLGMGD G ++K++E+VP + +L++ G FT+R++YEQFQN+ MGPI
Sbjct: 300 TTSFVSKLLGMGDIKGLVEKMNEIVPEESAEKLMEAFGSGTFTMRLLYEQFQNLQNMGPI 359
Query: 348 GQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNP-KLMNDSRIMRIA 406
+ SM+PG ++++PKG E++ ++K M +MDSMT+ ELD+ N K+ N R+ R+
Sbjct: 360 SSIMSMVPGM-ADMIPKGGEEQGTKRMKSMMVLMDSMTDAELDAPNASKIFNVKRMERVC 418
Query: 407 RGSGRQVREVMEMLEEYKRLAKIWSKMKGLKIP----KKGEMSALSRNMNAQHMSKVLPQ 462
RG+GR E++ +LEE+KRL K+ KMKG+K+P +G + + M+ LP
Sbjct: 419 RGAGRLPSEMITLLEEHKRLGKMMGKMKGIKMPGAGGARGRGNPQAMQQQMSQMANALPP 478
Query: 463 GMLKQIGGVGGLQNLMKQMG--STKDMMGMFGG 493
ML+ +GG G+ N+MKQ K M GM G
Sbjct: 479 DMLRMMGGQQGMMNMMKQFEGMDPKAMQGMMKG 511
>gi|386697149|gb|AFJ22035.1| signal recognition particle protein 54k, partial [Vidia sp. AD452]
Length = 432
Score = 532 bits (1371), Expect = e-148, Method: Compositional matrix adjust.
Identities = 258/435 (59%), Positives = 334/435 (76%), Gaps = 7/435 (1%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL+++DV KLV++++ N++ +++ D++AAG NKR++I A+F EL K+L
Sbjct: 1 LDSLLKEICTALIESDVNIKLVKQLRENVRTVIDFDEMAAGLNKRKMIMTAVFQELVKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG ++ P KG+ +VIMFVGLQG GKTTTCTK AYY+ KK WK +LVCADTFRAGAFDQ
Sbjct: 61 DPGVKAWQPVKGRTNVIMFVGLQGIGKTTTCTKMAYYYMKKNWKCSLVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIATEGVEKFANENFEIVIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAAT 267
+S A + PDL+++VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAAT
Sbjct: 181 IS-AAIQPDLIVYVMDASIGQACEAQAKAFKGKVDVGAIIVTKLDGHAKGGGALSAVAAT 239
Query: 268 KSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEG 327
KSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E + +D EL++KL G
Sbjct: 240 KSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVNE-LKLDDNEELIEKLKHG 298
Query: 328 NFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNE 387
FTLR MYEQ NI+KMGP Q+ +M+PGF +EL E ES +++KR MT+MDSM +
Sbjct: 299 EFTLRDMYEQLTNIMKMGPFNQILNMIPGFGAELSKCTSEAESMSRLKRMMTIMDSMADS 358
Query: 388 ELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLKIPKKGEM 444
ELDS KL + +RI+R+ARG+G REV E+L +Y + A + KM G+K KG
Sbjct: 359 ELDSREGAKLFSKQPTRIVRVARGAGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKG-- 416
Query: 445 SALSRNMNAQHMSKV 459
L++N+N M+K+
Sbjct: 417 GDLTKNVNPTQMAKL 431
>gi|386697241|gb|AFJ22081.1| signal recognition particle protein 54k, partial [Ewingia
coenobitae]
Length = 444
Score = 532 bits (1371), Expect = e-148, Method: Compositional matrix adjust.
Identities = 265/445 (59%), Positives = 341/445 (76%), Gaps = 10/445 (2%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL+++DV LV++++ N++ +++ D++AAG NKRR+I A+F EL K+L
Sbjct: 1 LDNMLKEICAALIESDVNILLVKKLRENVRSVIDFDEMAAGLNKRRMIMMAVFQELVKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG ++ P KGK +VIMFVGLQG GKTTTCTK AY++ +KGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPGVKAWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYHYMRKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAAT 267
+S A V P+L+++VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAAT
Sbjct: 181 IS-AAVQPNLIVYVMDASIGQACEAQARAFKSKVDVGAIIVTKLDGHAKGGGALSAVAAT 239
Query: 268 KSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEG 327
KSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E + +D EL++KL G
Sbjct: 240 KSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE-LKLDDNEELIEKLKHG 298
Query: 328 NFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNE 387
FTLR MYEQ NI+KMGP Q+ +M+PGF +EL E ES +++KR MT+MDSM++
Sbjct: 299 EFTLRDMYEQLANIMKMGPFNQILNMIPGFGAELSKCTSEAESMSRLKRMMTIMDSMSDA 358
Query: 388 ELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLK-IPKKGE 443
ELDS KL + +RI+RIARGSG REV E+L +Y + A + KM G+K + K G+
Sbjct: 359 ELDSREGAKLFSKQPTRIVRIARGSGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGD 418
Query: 444 MSALSRNMNAQHMSKVLPQGMLKQI 468
L++N+N M+K L Q M + I
Sbjct: 419 ---LTKNVNPAQMAK-LNQQMARMI 439
>gi|386697187|gb|AFJ22054.1| signal recognition particle protein 54k, partial [Chortoglyphus sp.
AD792]
Length = 444
Score = 532 bits (1370), Expect = e-148, Method: Compositional matrix adjust.
Identities = 264/445 (59%), Positives = 341/445 (76%), Gaps = 10/445 (2%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL+++DV LV++++ N++ +++ D++AAG NKRR+I A+F EL K+L
Sbjct: 1 LDNMLKEICAALIESDVNIILVKKLRENVRSVIDFDEMAAGLNKRRMIMMAVFQELVKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG ++TP KGK +VIMFVGLQG GKTTTCTK AY++ +KGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPGVKAWTPVKGKTNVIMFVGLQGIGKTTTCTKMAYHYMRKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAAT 267
+S A V P+L+++VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAAT
Sbjct: 181 IS-AAVQPNLIVYVMDASIGQACEAQARAFKSKVDVGAIIVTKLDGHAKGGGALSAVAAT 239
Query: 268 KSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEG 327
KSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E + +D EL++KL G
Sbjct: 240 KSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE-LKLDDNEELIEKLKHG 298
Query: 328 NFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNE 387
FTLR MYEQ NI+KMGP Q+ +M+PGF +EL E ES +++KR MT+MDSM +
Sbjct: 299 EFTLRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKGTSEAESMSRLKRMMTIMDSMADC 358
Query: 388 ELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLK-IPKKGE 443
ELDS K + +RI+R+ARGSG REV E+L +Y + A++ KM G+K + K G+
Sbjct: 359 ELDSREGAKFFSKQPTRIVRVARGSGVTQREVQELLSQYTKFAQVVKKMGGIKGLFKSGD 418
Query: 444 MSALSRNMNAQHMSKVLPQGMLKQI 468
LS+N+N M++ L Q M + I
Sbjct: 419 ---LSKNVNPAQMAR-LNQQMARMI 439
>gi|386697237|gb|AFJ22079.1| signal recognition particle protein 54k, partial [Askinasia sp.
AD304]
Length = 433
Score = 532 bits (1370), Expect = e-148, Method: Compositional matrix adjust.
Identities = 261/436 (59%), Positives = 337/436 (77%), Gaps = 9/436 (2%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL+++DV LV++++ N++ +++ D++AAG NKRR+I A+F EL K+L
Sbjct: 1 LDNMLKEICAALIESDVNILLVKKLRENVRSVIDFDEMAAGLNKRRMIMMAVFQELVKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG ++ P KGK +VIMFVGLQG GKTTTCTK AY++ +KGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPGVKAWQPIKGKTNVIMFVGLQGIGKTTTCTKMAYHYMRKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAAT 267
+S A V P+L+++VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAAT
Sbjct: 181 IS-AAVQPNLIVYVMDASIGQACEAQARAFKSKVDVGAIIVTKLDGHAKGGGALSAVAAT 239
Query: 268 KSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEG 327
KSP+IFIGTGEH+DEFE+F VKPF+S+LLGMGD G +DK++E + +D EL++KL G
Sbjct: 240 KSPIIFIGTGEHIDEFELFKVKPFISKLLGMGDIEGLIDKVNE-LKLDDNEELIEKLKHG 298
Query: 328 NFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNE 387
FTLR MYEQ NI+KMGP Q+ +M+PGF +EL E ES ++KR MT+MDSM++
Sbjct: 299 EFTLRDMYEQLTNIMKMGPFNQILNMIPGFGAELSKCTSEAESMFRLKRMMTIMDSMSDA 358
Query: 388 ELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLK-IPKKGE 443
ELDS KL + +RI+RIARGSG REV E+L +Y + A + KM G+K + K G+
Sbjct: 359 ELDSREGAKLFSKQPTRIVRIARGSGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGD 418
Query: 444 MSALSRNMNAQHMSKV 459
L++N+N M+K+
Sbjct: 419 ---LTKNVNPAQMAKL 431
>gi|432937583|ref|XP_004082449.1| PREDICTED: signal recognition particle 54 kDa protein-like, partial
[Oryzias latipes]
Length = 385
Score = 531 bits (1369), Expect = e-148, Method: Compositional matrix adjust.
Identities = 249/387 (64%), Positives = 316/387 (81%), Gaps = 2/387 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNATII+E+VLN L E+ ALL+ADV KLV++++ N+K +
Sbjct: 1 MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCAALLEADVNIKLVKQLRENVKAAI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+L+++A+G NKRR+IQ A+F EL K++DPG ++TP KGK +VIMFVGLQGSGKTTTC+K
Sbjct: 61 DLEEMASGLNKRRMIQHAVFKELVKLVDPGVKAWTPTKGKNNVIMFVGLQGSGKTTTCSK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY+Q+KGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGVE FK
Sbjct: 121 LAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVVIASEGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
EN ++IIVDTSGRHKQE +LFEEM QVS A V PD +++VMD+SIGQA QA+AFK
Sbjct: 181 AENFEIIIVDTSGRHKQEDSLFEEMLQVSNA-VQPDNIVYVMDASIGQACESQAKAFKDK 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V V +VIVTK+DGHAKGGGALSAVAAT+SP+IFIGTGEH+D+FE F +PF+S+LLGMGD
Sbjct: 240 VDVASVIVTKLDGHAKGGGALSAVAATRSPIIFIGTGEHIDDFEPFKTQPFISKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G +D+++E + +D EL+ KL G FTLR MYEQFQNI+KMGP GQ+ M+PGF ++
Sbjct: 300 IEGLIDRVNE-LKLDDNEELIDKLKHGQFTLRDMYEQFQNIMKMGPFGQIMGMIPGFGTD 358
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNE 387
M KG E+ES A++K+ MT+MDSM ++
Sbjct: 359 FMSKGNEQESMARLKKLMTIMDSMNDQ 385
>gi|386697277|gb|AFJ22099.1| signal recognition particle protein 54k, partial [Falculifer sp.
AD1244]
Length = 444
Score = 531 bits (1369), Expect = e-148, Method: Compositional matrix adjust.
Identities = 262/445 (58%), Positives = 341/445 (76%), Gaps = 10/445 (2%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL+++DV LV++++ N++ +++ D++AAG NKR++I A+F EL ++L
Sbjct: 1 LDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGLNKRKMIMTAVFKELVRLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ KKGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPGVKAWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAAT 267
+ +A + P+LV++VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAAT
Sbjct: 181 I-QAAIQPNLVVYVMDASIGQACEAQARAFKDKVDVGAIIVTKLDGHAKGGGALSAVAAT 239
Query: 268 KSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEG 327
KSP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK++E + +D EL++KL G
Sbjct: 240 KSPIIFIGTGEHIDEFEPFKVRPFISKLLGMGDIEGLIDKVNE-LKLDDNEELIEKLKHG 298
Query: 328 NFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNE 387
FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES +++KR MT+MDSM++
Sbjct: 299 EFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAESMSRLKRXMTIMDSMSDS 358
Query: 388 ELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLK-IPKKGE 443
ELDS KL + +RI+R++RGSG REV E+L +Y + A + KM G+K + K G+
Sbjct: 359 ELDSREGAKLFSKQPTRIVRVSRGSGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKTGD 418
Query: 444 MSALSRNMNAQHMSKVLPQGMLKQI 468
LS+N+N M+K L Q M K I
Sbjct: 419 ---LSKNVNPAQMAK-LNQQMAKMI 439
>gi|386697233|gb|AFJ22077.1| signal recognition particle protein 54k, partial [Naiacus sp.
AD305]
Length = 433
Score = 531 bits (1369), Expect = e-148, Method: Compositional matrix adjust.
Identities = 260/436 (59%), Positives = 337/436 (77%), Gaps = 9/436 (2%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL+++DV LV++++ N++ +++ D++AAG NKRR+I A+F EL K+L
Sbjct: 1 LDNMLKEICAALIESDVNIVLVKQLRENVRSVIDFDEMAAGLNKRRMIMMAVFKELVKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG ++ P KGK +VIMFVGLQG GKTTTCTK AY++ +KGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPGVKAWQPTKGKTNVIMFVGLQGIGKTTTCTKMAYHYMRKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAAT 267
+S A V P+L+I+VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAAT
Sbjct: 181 IS-AAVQPNLIIYVMDASIGQACEAQARAFKSKVDVGAIIVTKLDGHAKGGGALSAVAAT 239
Query: 268 KSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEG 327
KSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E + +D EL++KL G
Sbjct: 240 KSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE-LKLDDNEELIEKLKHG 298
Query: 328 NFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNE 387
FTLR MYEQ NI+KMGP Q+ +M+PGF +EL E ES +++KR MT+MDSM++
Sbjct: 299 EFTLRDMYEQLTNIMKMGPFNQILNMIPGFGAELSKCTSEAESMSRLKRMMTIMDSMSDS 358
Query: 388 ELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLK-IPKKGE 443
ELDS KL + +RI+R+ARG+G REV E+L +Y + A + KM G+K + K G+
Sbjct: 359 ELDSREGAKLFSKQPTRIVRVARGAGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGD 418
Query: 444 MSALSRNMNAQHMSKV 459
L++N+N M+K+
Sbjct: 419 ---LTKNVNPAQMAKL 431
>gi|386697577|gb|AFJ22249.1| signal recognition particle protein 54k, partial [Proctophyllodes
dolephyes]
Length = 444
Score = 531 bits (1369), Expect = e-148, Method: Compositional matrix adjust.
Identities = 259/436 (59%), Positives = 337/436 (77%), Gaps = 9/436 (2%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL+++DV LV++++ N++ +++ D++AAG NKRR+I A+F EL K+L
Sbjct: 1 LDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGLNKRRMIMMAVFKELVKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPGVKVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGVE F KEN ++IIVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIIIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAAT 267
+ +A + P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAAT
Sbjct: 181 I-QAAIQPNLVIYVMDASIGQACEAQAKAFKNKVDVGAIIVTKLDGHAKGGGALSAVAAT 239
Query: 268 KSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEG 327
KSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E + +D EL++KL G
Sbjct: 240 KSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE-LKLDDNEELIEKLKHG 298
Query: 328 NFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNE 387
FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES +++KR MT+MDSM++
Sbjct: 299 EFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDS 358
Query: 388 ELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLK-IPKKGE 443
ELDS K+ + +R++R++RG+G REV E+L +Y + A + KM G+K + K G+
Sbjct: 359 ELDSREGAKIFSKQPTRLVRVSRGAGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKTGD 418
Query: 444 MSALSRNMNAQHMSKV 459
L++N+N+ M K+
Sbjct: 419 ---LAKNVNSAQMLKL 431
>gi|403371696|gb|EJY85731.1| Signal recognition particle 54 kDa protein, putative [Oxytricha
trifallax]
Length = 561
Score = 531 bits (1368), Expect = e-148, Method: Compositional matrix adjust.
Identities = 269/490 (54%), Positives = 366/490 (74%), Gaps = 6/490 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LG IS+A+++++ AT+IDEKVL + L EI ALL ADV K V +++ +K IV
Sbjct: 1 MVLAELGQKISQALRKLNTATVIDEKVLGDILTEIASALLSADVNIKYVAKLRDAVKTIV 60
Query: 61 NLDDLAAG-HNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCT 119
L AG N R++IQQ + EL ML+ + KKGKP+V+MFVGLQGSGKTTTCT
Sbjct: 61 TLQMSQAGVANIRKLIQQTVVQELTNMLESENRPYEFKKGKPNVVMFVGLQGSGKTTTCT 120
Query: 120 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
K+AY++ +KGW+ LVCADTFRAGAF+QLK NA K K PF+G E+DPV+IA EGV F
Sbjct: 121 KFAYHYMRKGWRVGLVCADTFRAGAFEQLKMNAAKIKCPFFGHKKETDPVKIAQEGVNFF 180
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQ 239
K++ ++IIVDTSGRHKQEAALFEEM+QV +A V+PD IFVMDSSIGQA +DQA AF +
Sbjct: 181 KEQKFEIIIVDTSGRHKQEAALFEEMQQV-QAAVSPDTSIFVMDSSIGQACYDQATAFNK 239
Query: 240 SVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMG 299
++ VG+VI+TK+DGHAKGGGALSAV+AT+SPV+FIGTGEH D+ E F+ F+ RLLG+G
Sbjct: 240 AIRVGSVIITKLDGHAKGGGALSAVSATQSPVVFIGTGEHFDDLESFNASSFIKRLLGLG 299
Query: 300 DWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSS 359
D G + + + +P D+Q ++++ + +G F+LR M +QF ++L MGP+ QV SM+PG SS
Sbjct: 300 DIGGLVQTVKDAIPEDKQKKMVENIQKGEFSLRDMRDQFASVLNMGPLNQVVSMIPGLSS 359
Query: 360 ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEM 419
L+PKGREKES A+IKR++ +MDSMT+EELD P M+D RI+RIA+GSG + EV +
Sbjct: 360 NLIPKGREKESTARIKRFLCIMDSMTDEELDCIKP--MSDFRILRIAKGSGCRPEEVAFL 417
Query: 420 LEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNA--QHMSKVLPQGMLKQIGGVGGLQNL 477
LEE+K+ AK+ + +K+ + ++ L+RN Q MSK + +L+Q+GG+G L N+
Sbjct: 418 LEEHKKFAKMVEQFGKMKLNNQTDLKNLNRNPKQLMQQMSKAIDPKLLQQMGGMGNLMNM 477
Query: 478 MKQMGSTKDM 487
MK+MG+ + M
Sbjct: 478 MKEMGNMEGM 487
>gi|386697423|gb|AFJ22172.1| signal recognition particle protein 54k, partial [Diplaegidia
columbae]
Length = 444
Score = 531 bits (1368), Expect = e-148, Method: Compositional matrix adjust.
Identities = 260/436 (59%), Positives = 336/436 (77%), Gaps = 9/436 (2%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L E L EI AL+++DV LV++++ N++ +++ D++AAG NKRR+I A+F EL K+L
Sbjct: 1 LEELLKEICTALIESDVNIMLVKKLRENVRSVIDFDEMAAGLNKRRMIMMAVFQELVKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPGVKVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIVIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAAT 267
+ +A + P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAAT
Sbjct: 181 I-QAAIQPNLVIYVMDASIGQACEAQARAFKNKVDVGAIIVTKLDGHAKGGGALSAVAAT 239
Query: 268 KSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEG 327
KSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E + ++ EL+ KL G
Sbjct: 240 KSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVNE-LKLEDNEELIAKLKHG 298
Query: 328 NFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNE 387
FT+R MYEQ NI+KMGP Q+ +M+PGF ++L E ES +++KR MT+MDSM++
Sbjct: 299 EFTIRDMYEQLTNIMKMGPFNQILNMIPGFGADLAKCASEAESMSRLKRMMTIMDSMSDS 358
Query: 388 ELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLK-IPKKGE 443
ELDS KL + +RI+R+ARGSG REV E+L +Y + + + KM G+K + K G+
Sbjct: 359 ELDSREGAKLFSKQPTRIIRVARGSGVTQREVQELLSQYTKFSAVVKKMGGIKGLFKSGD 418
Query: 444 MSALSRNMNAQHMSKV 459
L++N+N M+K+
Sbjct: 419 ---LAKNVNPAQMAKL 431
>gi|386697211|gb|AFJ22066.1| signal recognition particle protein 54k, partial [Diadasiopus
eickworti]
Length = 433
Score = 531 bits (1368), Expect = e-148, Method: Compositional matrix adjust.
Identities = 260/436 (59%), Positives = 336/436 (77%), Gaps = 9/436 (2%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL+++DV LV++++ N++K+++ D++AAG NKRR+I A+F EL K+L
Sbjct: 1 LDNMLKEICAALIESDVNIILVKQLRENVRKVIDFDEMAAGLNKRRMIMMAVFQELVKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG ++ P KGK +VIMFVGLQG GKTTTCTK AY++ +KGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPGVKAWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYHYMRKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIASEGVEKFTSENFEIVIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAAT 267
+S A V P+L+++VMD+SIGQA QA+AF V VGAVIVTK+DGHAKGGGALSAVAAT
Sbjct: 181 IS-AAVQPNLIVYVMDASIGQACEAQARAFSSKVDVGAVIVTKLDGHAKGGGALSAVAAT 239
Query: 268 KSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEG 327
KSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E + +D EL++KL G
Sbjct: 240 KSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE-LKLDDNEELIEKLKHG 298
Query: 328 NFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNE 387
FTLR MYEQ NI+KMGP Q+ +M+PGF +EL E ES +++KR MT+MDSM +
Sbjct: 299 EFTLRDMYEQLTNIMKMGPFNQILNMIPGFGAELSKCTSEAESMSRLKRMMTIMDSMADS 358
Query: 388 ELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLK-IPKKGE 443
ELDS KL + +RI+R+ARG+G REV E+L +Y + A + KM G+K + K G+
Sbjct: 359 ELDSREGAKLFSKQPTRIVRVARGAGVMTREVQELLSQYTKFAAVVKKMGGIKGLFKTGD 418
Query: 444 MSALSRNMNAQHMSKV 459
L++N+N M+K+
Sbjct: 419 ---LAKNVNPAQMAKL 431
>gi|386697263|gb|AFJ22092.1| signal recognition particle protein 54k, partial [Kramerella sp.
AD967]
Length = 444
Score = 531 bits (1367), Expect = e-148, Method: Compositional matrix adjust.
Identities = 260/444 (58%), Positives = 339/444 (76%), Gaps = 8/444 (1%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL+++DV LV++++ N++ +++ D++AAG NKR++I A+F EL ++L
Sbjct: 1 LDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGLNKRKMIMTAVFKELVRLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ KKGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPGVKAWQPAKGKTNVIMFVGLQGIGKTTTCTKMAYYYLKKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAAT 267
+ +A + P+LV++VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAAT
Sbjct: 181 I-QAAIQPNLVVYVMDASIGQACESQARAFKNKVDVGAIIVTKLDGHAKGGGALSAVAAT 239
Query: 268 KSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEG 327
KSP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK++E + ++ EL++KL G
Sbjct: 240 KSPIIFIGTGEHIDEFEQFKVRPFISKLLGMGDIEGLIDKVNE-LKLEDNEELIEKLKHG 298
Query: 328 NFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNE 387
FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES +++KR MT+MDSM++
Sbjct: 299 EFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDS 358
Query: 388 ELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLKIPKKGEM 444
ELDS KL + +RI+R++RGSG REV E+L +Y + A + KM G+K KG
Sbjct: 359 ELDSREGAKLFSKQPTRIIRVSRGSGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKG-- 416
Query: 445 SALSRNMNAQHMSKVLPQGMLKQI 468
L++N+N M+K L Q M K I
Sbjct: 417 GDLTKNVNPAQMAK-LNQQMAKMI 439
>gi|349605055|gb|AEQ00420.1| Signal recognition particle 54 kDa protein-like protein, partial
[Equus caballus]
Length = 454
Score = 531 bits (1367), Expect = e-148, Method: Compositional matrix adjust.
Identities = 262/452 (57%), Positives = 350/452 (77%), Gaps = 12/452 (2%)
Query: 51 EMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQ 110
+++ N+K ++L+++A+G NKR++IQ A+F EL K++DPG ++TP KGK +VIMFVGLQ
Sbjct: 1 QLRENVKSAIDLEEMASGLNKRKMIQHAVFKELVKLVDPGVKAWTPTKGKQNVIMFVGLQ 60
Query: 111 GSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVR 170
GSGKTTTC+K AYY+Q+KGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV
Sbjct: 61 GSGKTTTCSKLAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVI 120
Query: 171 IAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAA 230
IA EGVE FK EN ++IIVDTSGRHKQE +LFEEM QV+ A + PD +++VMD+SIGQA
Sbjct: 121 IASEGVEKFKNENFEIIIVDTSGRHKQEDSLFEEMLQVANA-IQPDNIVYVMDASIGQAC 179
Query: 231 FDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKP 290
QA+AFK V V +VIVTK+DGHAKGGGALSAVAATKSP+IFIGTGEH+D+FE F +P
Sbjct: 180 EAQAKAFKDKVDVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQP 239
Query: 291 FVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQV 350
F+S+LLGMGD G +DK++E + +D L++KL G FTLR MYEQFQNI+KMGP Q+
Sbjct: 240 FISKLLGMGDIEGLIDKVNE-LKLDDNEALIEKLKHGQFTLRDMYEQFQNIMKMGPFSQI 298
Query: 351 FSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIAR 407
M+PGF ++ M KG E+ES A++K+ MT+MDSM ++ELDS++ K+ + RI R+AR
Sbjct: 299 LGMIPGFGTDFMSKGNEQESMARLKKLMTIMDSMNDQELDSTDGAKVFSKQPGRIQRVAR 358
Query: 408 GSGRQVREVMEMLEEYKRLAKIWSKMKGLK-IPKKGEMSA-LSRNMNA---QHMSKVLPQ 462
GSG R+V E+L +Y + A++ KM G+K + K G+MS +S++ A Q M+K++
Sbjct: 359 GSGVSTRDVQELLTQYTKFAQMVKKMGGIKGLFKGGDMSKNVSQSQMAKLNQQMAKMMDP 418
Query: 463 GMLKQIGGVGGLQNLMKQM--GSTKDMMGMFG 492
+L +GG+ GLQ++M+Q G+ +M GM G
Sbjct: 419 RVLHHMGGMAGLQSMMRQFQQGAAGNMKGMMG 450
>gi|386697217|gb|AFJ22069.1| signal recognition particle protein 54k, partial [Cosmoglyphus sp.
AD702]
Length = 444
Score = 531 bits (1367), Expect = e-148, Method: Compositional matrix adjust.
Identities = 263/445 (59%), Positives = 340/445 (76%), Gaps = 10/445 (2%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL+++DV LV++++ N++ +++ D++AAG NKRR+I A+F EL K+L
Sbjct: 1 LDNMLKEICAALIESDVNIVLVKQLRENVRSVIDFDEMAAGLNKRRMIMMAVFKELVKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG ++ P KGK +VIMFVGLQG GKTTTCTK AY++ +KGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPGVKAWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYHYMRKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAAT 267
+S A V P+L+++VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAAT
Sbjct: 181 IS-AAVQPNLIVYVMDASIGQACEAQARAFKSKVDVGAIIVTKLDGHAKGGGALSAVAAT 239
Query: 268 KSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEG 327
KSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E + +D EL++KL G
Sbjct: 240 KSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE-LKLDDNEELIEKLKHG 298
Query: 328 NFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNE 387
FTLR MYEQ NI+KMGP Q+ +M+PGF +EL E ES +++KR MT+MDSM +
Sbjct: 299 EFTLRDMYEQLTNIMKMGPFNQILNMIPGFGAELSKCTSEAESMSRLKRMMTIMDSMADS 358
Query: 388 ELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLK-IPKKGE 443
ELDS KL + +RI+R+ARG+G REV E+L +Y + A + KM G+K + K G+
Sbjct: 359 ELDSREGAKLFSKQPTRIVRVARGAGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGD 418
Query: 444 MSALSRNMNAQHMSKVLPQGMLKQI 468
L++N+N M+K L Q M + I
Sbjct: 419 ---LTKNVNPAQMAK-LNQQMARMI 439
>gi|386697121|gb|AFJ22021.1| signal recognition particle protein 54k, partial [Hormosianoetus
mallotae]
Length = 432
Score = 530 bits (1366), Expect = e-148, Method: Compositional matrix adjust.
Identities = 261/436 (59%), Positives = 337/436 (77%), Gaps = 9/436 (2%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI ALL++DV LV++++ N++K+++ D++AAG NKRR+I A+F ELCK+L
Sbjct: 1 LDNMLKEICAALLESDVNILLVKKLRENVRKVIDFDEMAAGLNKRRMIMMAVFQELCKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG + P KG+ +V+MFVGLQG GKTTT TK AYY+ K+GWK ALVCADTFRAGAFDQ
Sbjct: 61 DPGVKQWQPVKGRTNVVMFVGLQGIGKTTTVTKMAYYYMKRGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA +GV F KEN +++IVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIAADGVSKFTKENFEIVIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAAT 267
+ AT +PDLV++VMD+SIGQA QA+AFK V +GA+IVTK+DGHAKGGGALSAVAAT
Sbjct: 181 IQAAT-SPDLVVYVMDASIGQACESQAKAFKSKVDIGAIIVTKLDGHAKGGGALSAVAAT 239
Query: 268 KSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEG 327
KSPVIFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E + ++ EL++KL G
Sbjct: 240 KSPVIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE-LKLEDNEELIEKLKHG 298
Query: 328 NFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNE 387
FTLR MYEQ NI+KMGP Q+ +M+PGF EL E ES A++KR MT+MDSM++
Sbjct: 299 EFTLRDMYEQLTNIMKMGPFNQILNMIPGFGPELSKCTSEAESAARLKRMMTIMDSMSDN 358
Query: 388 ELDS-SNPKLMN--DSRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLK-IPKKGE 443
ELDS KL N +RI R+ARG+G REV E+L +Y + A++ KM G+K + K+G+
Sbjct: 359 ELDSREGAKLFNRQPNRIARVARGAGVWRREVQELLSQYTKFAQMVKKMGGMKGLFKQGD 418
Query: 444 MSALSRNMNAQHMSKV 459
L++N+N M+K+
Sbjct: 419 ---LTKNVNPMQMAKL 431
>gi|301120250|ref|XP_002907852.1| signal recognition particle, putative [Phytophthora infestans
T30-4]
gi|262102883|gb|EEY60935.1| signal recognition particle, putative [Phytophthora infestans
T30-4]
Length = 511
Score = 530 bits (1366), Expect = e-148, Method: Compositional matrix adjust.
Identities = 262/490 (53%), Positives = 368/490 (75%), Gaps = 12/490 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LG + A+ +++ T++D++V N L EI ALL++DVQ KLVR+++ N+K V
Sbjct: 1 MVLAELGSKLQGALAKLNRTTVVDDEVFNALLKEICGALLESDVQVKLVRQLRDNVKLAV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NL+D ++G N+RR+IQ+++ +++ +ML+P + KKG+ +VIMFVGLQGSGKTT+ K
Sbjct: 61 NLEDASSGVNRRRLIQKSVVDQIVQMLEPEAQPYKMKKGQSNVIMFVGLQGSGKTTSIAK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
+A+++Q+KGWK +VCADTFRAGAFDQLKQN+TK +IPFYGSYTE+DPVRIA EGV F+
Sbjct: 121 FAHFYQRKGWKTCMVCADTFRAGAFDQLKQNSTKLRIPFYGSYTEADPVRIAEEGVAQFR 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
EN +LI+VDTSGRHKQE LF EMR+VS A V PD V+FVMDS+IGQA FDQA AF+++
Sbjct: 181 AENYELILVDTSGRHKQETDLFAEMREVS-AAVQPDDVVFVMDSTIGQAVFDQASAFRET 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V VG+VI+TK+DGHAKGGGALSAVAAT SP+IF GTGEH +FE F+ + FVSRL+GMGD
Sbjct: 240 VDVGSVIITKLDGHAKGGGALSAVAATGSPIIFYGTGEHFADFESFNAQSFVSRLMGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFS-- 358
G M+++ +D Q E+++K +G FTLR MY+QFQ+++KMGP+ +V SM+PG
Sbjct: 300 IRGLMEEVKTSGMLDNQEEMVEKFQKGVFTLRDMYKQFQSVMKMGPLSKVMSMIPGLPQG 359
Query: 359 -SELMP-KGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREV 416
SE+M G E+E+ +++R++ MMDSMT+ ELD + P +++SR R+ARGSG Q+ EV
Sbjct: 360 MSEMMNMGGGEEEASKRLRRFLFMMDSMTDAELDGAVP--LSESRQTRVARGSGCQLYEV 417
Query: 417 MEMLEEYKRLAKIWSKMKGLKIPKKGEMS---ALSRNMNA--QHMSKVLPQGMLKQIGGV 471
+L+ +K+ A + S+M + K G+ + ++RN NA Q +SKV+ M+ Q+GG
Sbjct: 418 EFLLKCHKQFATVVSRMGKSGLMKTGDAALGKQMARNPNAVMQQLSKVMDPKMMAQMGGP 477
Query: 472 GGLQNLMKQM 481
+ +MKQM
Sbjct: 478 QNMMRMMKQM 487
>gi|386697125|gb|AFJ22023.1| signal recognition particle protein 54k, partial [Histiostomatidae
gen. sp. AD357]
Length = 444
Score = 530 bits (1365), Expect = e-148, Method: Compositional matrix adjust.
Identities = 263/445 (59%), Positives = 339/445 (76%), Gaps = 10/445 (2%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL+++DV LV++++ N++ +++ D++AAG NKRR+I A+F EL K+L
Sbjct: 1 LDNMLKEICAALIESDVNIVLVKKLRENVRSVIDFDEMAAGLNKRRMIMMAVFQELVKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG ++ P KGK +VIMFVGLQG GKTTTCTK AY++ +KGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPGVKAYQPVKGKTNVIMFVGLQGIGKTTTCTKMAYHYMRKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIATEGVEKFTNENFEIVIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAAT 267
+S A V P +++VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAAT
Sbjct: 181 IS-AAVQPQQIVYVMDASIGQACEAQAKAFKSKVDVGAIIVTKLDGHAKGGGALSAVAAT 239
Query: 268 KSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEG 327
KSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E + +D EL++KL G
Sbjct: 240 KSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE-LKLDDNEELIEKLKHG 298
Query: 328 NFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNE 387
FTLR MYEQ NI+KMGP Q+ +M+PGF +EL E ES +++KR MT+MDSM++
Sbjct: 299 EFTLRDMYEQLTNIMKMGPFNQILNMIPGFGAELSKCTSEAESMSRLKRMMTIMDSMSDA 358
Query: 388 ELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLK-IPKKGE 443
ELDS KL + +RI+R+ARG+G REV E+L +Y + A + KM G+K + K G+
Sbjct: 359 ELDSREGAKLFSKQPTRIVRVARGAGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKTGD 418
Query: 444 MSALSRNMNAQHMSKVLPQGMLKQI 468
L++N+N M+K L Q M K I
Sbjct: 419 ---LTKNVNPAQMAK-LNQQMAKMI 439
>gi|386697219|gb|AFJ22070.1| signal recognition particle protein 54k, partial [Sancassania
nesbitti]
Length = 433
Score = 530 bits (1365), Expect = e-148, Method: Compositional matrix adjust.
Identities = 257/436 (58%), Positives = 336/436 (77%), Gaps = 9/436 (2%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL+++DV LV++++ N++ +++ D++AAG NKRR+I A+F EL K+L
Sbjct: 1 LDNMLKEICAALIESDVNIVLVKQLRENVRSVIDFDEMAAGLNKRRMIMMAVFKELVKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG ++ P KGK +VIMFVGLQG GKTTTCTK AY++ +KGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPGVKAYQPVKGKTNVIMFVGLQGIGKTTTCTKMAYHYMRKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAAT 267
+S A V P +++VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAAT
Sbjct: 181 IS-AAVQPQQIVYVMDASIGQACEAQARAFKSKVDVGAIIVTKLDGHAKGGGALSAVAAT 239
Query: 268 KSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEG 327
KSP+IFIGTGEH+DEFE+F VKPF+S+LLGMGD G +DK++E + +D EL++KL G
Sbjct: 240 KSPIIFIGTGEHIDEFELFKVKPFISKLLGMGDIEGLIDKVNE-LKLDDNEELIEKLKHG 298
Query: 328 NFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNE 387
FTLR MYEQ NI+KMGP Q+ +M+PGF +EL E ES +++KR MT+MDSM++
Sbjct: 299 EFTLRDMYEQLTNIMKMGPFNQILNMIPGFGAELSKCTSEAESMSRLKRMMTIMDSMSDS 358
Query: 388 ELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLK-IPKKGE 443
ELDS KL + +RI+R++RG+G REV E+L +Y + A + KM G+K + K G+
Sbjct: 359 ELDSREGAKLFSKQPTRIVRVSRGAGVSQREVQELLSQYTKFAAVVKKMGGIKGLFKTGD 418
Query: 444 MSALSRNMNAQHMSKV 459
L++N+N M+K+
Sbjct: 419 ---LAKNVNPSQMAKL 431
>gi|386697111|gb|AFJ22016.1| signal recognition particle protein 54k, partial [Aphodanoetus
teinophallus]
Length = 444
Score = 530 bits (1364), Expect = e-148, Method: Compositional matrix adjust.
Identities = 260/436 (59%), Positives = 335/436 (76%), Gaps = 9/436 (2%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L E+ AL+++DV LV++++ NI+ +++ D++AAG NKRR+I A+F ELCK+L
Sbjct: 1 LDNMLKEVCAALIESDVNIMLVKKLRENIRNVIDFDEMAAGLNKRRMIMMAVFQELCKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG P + P KG+ +V+MFVGLQG GKTTT TK AY++ KKGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPGVPQWAPVKGRTNVVMFVGLQGIGKTTTVTKMAYHYMKKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA +GV F+KEN +++IVDTSGRHKQE +LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIAADGVNKFQKENFEIVIVDTSGRHKQENSLFEEMLA 180
Query: 208 VSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAAT 267
+ AT +PDLV++VMD+SIGQA QA+AFK V +GA+IVTK+DGHAKGGGALSAVAAT
Sbjct: 181 IQAAT-SPDLVVYVMDASIGQACEAQARAFKSKVDIGAIIVTKLDGHAKGGGALSAVAAT 239
Query: 268 KSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEG 327
KSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E + +++ EL++KL G
Sbjct: 240 KSPIIFIGTGEHIDEFESFKVKPFISKLLGMGDIEGLIDKVNE-LKLEENDELIEKLKHG 298
Query: 328 NFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNE 387
FTLR MYEQ NI+KMGP Q+ M+PGF E+ E ES A++KR MT+MDSM++
Sbjct: 299 EFTLRDMYEQLTNIMKMGPFNQILGMIPGFGPEMAQGASEAESAARLKRMMTIMDSMSDG 358
Query: 388 ELDS-SNPKLMN--DSRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLK-IPKKGE 443
ELDS KL N SRI RIARG+G REV E+L +Y + A++ KM G+K + K G+
Sbjct: 359 ELDSREGAKLFNRQPSRIARIARGAGVWKREVAELLSQYTKFAQMVKKMGGMKGLFKPGD 418
Query: 444 MSALSRNMNAQHMSKV 459
S+N+N M+K+
Sbjct: 419 ---FSKNVNPMQMAKL 431
>gi|386697227|gb|AFJ22074.1| signal recognition particle protein 54k, partial [Capillaroglyphus
polypori]
Length = 444
Score = 530 bits (1364), Expect = e-148, Method: Compositional matrix adjust.
Identities = 263/445 (59%), Positives = 340/445 (76%), Gaps = 10/445 (2%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL+++DV LV++++ N++ +++ D++AAG NKRR+I A+F EL K+L
Sbjct: 1 LDNMLKEICAALIESDVNIVLVKKLRENVRSVIDFDEMAAGLNKRRMIMMAVFQELVKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG ++ P KGK +VIMFVGLQG GKTTTCTK AY++ +KGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPGIKAWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYHYLRKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAAT 267
+S A + P L+++VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAAT
Sbjct: 181 IS-AAIQPQLIVYVMDASIGQACEAQARAFKSKVDVGAIIVTKLDGHAKGGGALSAVAAT 239
Query: 268 KSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEG 327
KSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E + +D EL++KL G
Sbjct: 240 KSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE-LKLDDNEELIEKLKHG 298
Query: 328 NFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNE 387
FTLR MYEQ NI+KMGP Q+ +M+PGF +EL E ES +++KR MT+MDSM++
Sbjct: 299 EFTLRDMYEQLTNIMKMGPFNQILNMIPGFGAELSKCTSEAESMSRLKRMMTIMDSMSDA 358
Query: 388 ELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLK-IPKKGE 443
ELDS KL + +RI+R+ARG+G REV E+L +Y + A + KM G+K + K G+
Sbjct: 359 ELDSREGAKLFSKQPTRIVRVARGAGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGD 418
Query: 444 MSALSRNMNAQHMSKVLPQGMLKQI 468
L++N+N M+K L Q M K I
Sbjct: 419 ---LTKNVNPAQMAK-LNQQMAKMI 439
>gi|386697229|gb|AFJ22075.1| signal recognition particle protein 54k, partial [Boletoglyphus
extremiorientalis]
gi|386697231|gb|AFJ22076.1| signal recognition particle protein 54k, partial [Boletoglyphus
ornatus]
Length = 444
Score = 530 bits (1364), Expect = e-148, Method: Compositional matrix adjust.
Identities = 263/445 (59%), Positives = 340/445 (76%), Gaps = 10/445 (2%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL+++DV LV++++ N++ +++ D++AAG NKRR+I A+F EL K+L
Sbjct: 1 LDNMLKEICAALIESDVNIILVKKLRENVRSVIDFDEMAAGLNKRRMIMMAVFQELVKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG ++ P KGK +VIMFVGLQG GKTTTCTK AY++ +KGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPGIKAWQPIKGKTNVIMFVGLQGIGKTTTCTKMAYHYLRKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIAAEGVEKFTNENFEIVIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAAT 267
+S A + P L+++VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAAT
Sbjct: 181 IS-AAIQPQLIVYVMDASIGQACEAQARAFKSKVDVGAIIVTKLDGHAKGGGALSAVAAT 239
Query: 268 KSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEG 327
KSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E + +D EL++KL G
Sbjct: 240 KSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE-LKLDDNEELIEKLKHG 298
Query: 328 NFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNE 387
FTLR MYEQ NI+KMGP Q+ +M+PGF +EL E ES +++KR MT+MDSM++
Sbjct: 299 EFTLRDMYEQLTNIMKMGPFNQILNMIPGFGAELSKCTSEAESMSRLKRMMTIMDSMSDA 358
Query: 388 ELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLK-IPKKGE 443
ELDS KL + +RI+R+ARG+G REV E+L +Y + A + KM G+K + K G+
Sbjct: 359 ELDSREGAKLFSKQPTRIVRVARGAGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGD 418
Query: 444 MSALSRNMNAQHMSKVLPQGMLKQI 468
L++N+N M+K L Q M K I
Sbjct: 419 ---LTKNVNPAQMAK-LNQQMAKMI 439
>gi|118370390|ref|XP_001018396.1| signal recognition particle 54 kDa protein 1, SRP54 [Tetrahymena
thermophila]
gi|89300163|gb|EAR98151.1| signal recognition particle 54 kDa protein 1, SRP54 [Tetrahymena
thermophila SB210]
Length = 518
Score = 529 bits (1363), Expect = e-147, Method: Compositional matrix adjust.
Identities = 263/499 (52%), Positives = 365/499 (73%), Gaps = 10/499 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A+QQ++ A +IDE++LN+ L EI ALLQ+DV K V ++++NI
Sbjct: 1 MVLADLGKRINNALQQLNKAPVIDEELLNQVLKEIQLALLQSDVNVKYVAKLKSNIIMKF 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++D + G N +++IQQA+ EL +MLD K F PK+GKP+V+MFVGLQG+GKTTTCTK
Sbjct: 61 KMED-SQGVNLKKMIQQAVVQELTQMLDSNKKPFVPKRGKPNVVMFVGLQGAGKTTTCTK 119
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YAY+ QKKGW+ AL+CADTFRAGAFDQLKQNATK ++PFYGSY+E+DPV IA EGV+ FK
Sbjct: 120 YAYHWQKKGWRTALICADTFRAGAFDQLKQNATKVRVPFYGSYSETDPVAIAEEGVKHFK 179
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KEN ++IIVDTSGRHKQE+ LF+EM+QV +A VNPD IFVMD SIGQA +DQAQAF+ +
Sbjct: 180 KENYEMIIVDTSGRHKQESELFDEMKQV-QAAVNPDECIFVMDGSIGQACYDQAQAFRNA 238
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V+VG+VI+TK+DGHAKGGGALSAVAAT+SP+IFIGTGEH ++ E F+ + FV RLLG+GD
Sbjct: 239 VNVGSVIITKLDGHAKGGGALSAVAATESPIIFIGTGEHFEDLEPFNPESFVKRLLGLGD 298
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G + + E V M+ Q + + +++G F++R Q+++ILK+G I Q SM+PG +
Sbjct: 299 IKGMITTVTEAVDMETQGKAIANITKGQFSIRDFQAQYKSILKLGSINQFMSMIPGMGNS 358
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEML 420
++ K EKES K+K+++T+MDSM + ELD +N SRI+RIARGSG + +V ++L
Sbjct: 359 ILDKNNEKESIRKVKKFLTIMDSMNDNELDGVVA--INPSRIVRIARGSGSSLEDVNQLL 416
Query: 421 EEYKRLAKIWSKMKGLKIPKKGEMSALSRNMN--AQHMSKVLPQGMLKQIGGVGGLQNLM 478
+EYK+++K++ + + + RN N M L M++ +GG+G + N++
Sbjct: 417 DEYKKISKVFIGLGKGLGKGGDIGNIM-RNPNQIKNQMGAALDPKMIQGMGGMGNIMNMV 475
Query: 479 KQMGSTK---DMMGMFGGG 494
K+M + D+M GGG
Sbjct: 476 KEMSKMEGVGDLMKGLGGG 494
>gi|386697235|gb|AFJ22078.1| signal recognition particle protein 54k, partial [Naiadacarus
arboricola]
Length = 433
Score = 529 bits (1363), Expect = e-147, Method: Compositional matrix adjust.
Identities = 259/436 (59%), Positives = 336/436 (77%), Gaps = 9/436 (2%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL+++DV LV++++ N++ +++ +++AAG NKRR+I A+F EL K+L
Sbjct: 1 LDNMLKEICAALIESDVNIVLVKQLRENVRSVIDFEEMAAGLNKRRMIMMAVFKELVKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ +KGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPGVKAWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMRKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEVVIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAAT 267
+S A V P+L+I+VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAAT
Sbjct: 181 IS-AAVQPNLIIYVMDASIGQACEAQARAFKSKVDVGAIIVTKLDGHAKGGGALSAVAAT 239
Query: 268 KSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEG 327
KSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E + +D EL++KL G
Sbjct: 240 KSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE-LKLDDNEELIEKLKHG 298
Query: 328 NFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNE 387
FTLR MYEQ NI+KMGP Q+ +M+PGF +EL E ES +++KR MT+MDSM++
Sbjct: 299 EFTLRDMYEQLTNIMKMGPFNQILNMIPGFGAELSKCTSEAESMSRLKRMMTIMDSMSDS 358
Query: 388 ELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLK-IPKKGE 443
ELDS KL + +RI+R+ RG+G REV E+L +Y + A + KM G+K + K G+
Sbjct: 359 ELDSREGAKLFSKQPTRIIRVGRGAGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGD 418
Query: 444 MSALSRNMNAQHMSKV 459
L++N+N M+K+
Sbjct: 419 ---LTKNVNPAQMAKL 431
>gi|386697193|gb|AFJ22057.1| signal recognition particle protein 54k, partial [Oryzomyopus sp.
AD729]
Length = 444
Score = 529 bits (1362), Expect = e-147, Method: Compositional matrix adjust.
Identities = 263/445 (59%), Positives = 340/445 (76%), Gaps = 10/445 (2%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL+++DV LV++++ N++ +++ +++AAG NKRR+I A+F EL K+L
Sbjct: 1 LDNMLKEICSALIESDVNIILVKQLRENVRSVIDFEEMAAGLNKRRMIMMAVFKELVKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG S+ P KGK ++IMFVGLQG GKTTTCTK AY++ +KGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPGVKSWQPVKGKTNIIMFVGLQGIGKTTTCTKMAYHYMRKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIASEGVEKFINENFEIVIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAAT 267
+S A V P+L+++VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAAT
Sbjct: 181 IS-AAVQPNLIVYVMDASIGQACEAQARAFKSKVDVGAIIVTKLDGHAKGGGALSAVAAT 239
Query: 268 KSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEG 327
KSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E + +D EL++KL G
Sbjct: 240 KSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE-LKLDDNEELIEKLKHG 298
Query: 328 NFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNE 387
FTLR MYEQ NI+KMGP Q+ +M+PGF +EL E ES +++KR MT+MDSM +
Sbjct: 299 EFTLRDMYEQLTNIMKMGPFNQILNMIPGFGAELSKCTSEAESMSRLKRMMTIMDSMADS 358
Query: 388 ELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLK-IPKKGE 443
ELDS KL + +RI+RI+RGSG REV E+L +Y + A + KM G+K + K G+
Sbjct: 359 ELDSREGAKLFSKQPTRIIRISRGSGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGD 418
Query: 444 MSALSRNMNAQHMSKVLPQGMLKQI 468
L++N+N M+K L Q M + I
Sbjct: 419 ---LTKNVNPAQMAK-LNQQMARMI 439
>gi|145503400|ref|XP_001437676.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124404829|emb|CAK70279.1| unnamed protein product [Paramecium tetraurelia]
Length = 507
Score = 529 bits (1362), Expect = e-147, Method: Compositional matrix adjust.
Identities = 263/489 (53%), Positives = 359/489 (73%), Gaps = 14/489 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIK--- 57
MVLA+LG SI+ A+Q++S A ++DE ++++ L EI ALL+ADV K +++++ ++K
Sbjct: 1 MVLAELGKSINAALQKLSKAPVVDEALVDQILGEIAMALLKADVNAKFIKKLREDVKMEF 60
Query: 58 KIVNLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTT 117
K+ +++ N +++IQ+A+ + L +ML+ + F PKKGK +VIMFVGLQGSGKTTT
Sbjct: 61 KLCEEENI----NHQKLIQKAVVDGLTRMLESDRKPFQPKKGKQNVIMFVGLQGSGKTTT 116
Query: 118 CTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVE 177
CTKYAYY+QKKGWK ALVCADTFRAGAFDQLKQNATK ++PFYGSYTE+DPV+IA EGV
Sbjct: 117 CTKYAYYYQKKGWKVALVCADTFRAGAFDQLKQNATKVRVPFYGSYTEADPVQIAQEGVN 176
Query: 178 TFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAF 237
FKKE ++IIVDTSGRHKQE LFEEM+QV EA V PD ++FVMDSSIGQA FDQA AF
Sbjct: 177 VFKKEAFEIIIVDTSGRHKQENDLFEEMKQV-EAAVKPDDIVFVMDSSIGQACFDQALAF 235
Query: 238 KQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLG 297
K++V+VG+VI+TK+DGHAKGGGALSAVAAT+SP++FIG GEH D+ E F+ FV RLLG
Sbjct: 236 KKAVNVGSVIITKLDGHAKGGGALSAVAATESPIVFIGEGEHFDDLESFEASSFVRRLLG 295
Query: 298 MGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGF 357
+GD + + +VV M QP+L+QKL EG F++R + QF ++LK+G + Q S +PG
Sbjct: 296 LGDINKLFQSVKDVVNMRDQPQLIQKLKEGKFSIRDLQTQFNSVLKLGSLNQFMSAIPGM 355
Query: 358 SSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVM 417
S ++ KG EKES +I+R++ +M+SMT +ELD +N RI+RIA+GSG + EV
Sbjct: 356 GSSVLSKGNEKESIKRIQRFLCIMNSMTADELDGEGN--LNFCRIVRIAKGSGTSIEEVH 413
Query: 418 EMLEEYKRLAKIWSKMKGLKIPKK--GEMSALSRNMNA--QHMSKVLPQGMLKQIGGVGG 473
+L+E+K+L+K+ + + K E L RN Q M + ML+++GG+
Sbjct: 414 ILLDEHKKLSKVVGNLAKTNLGGKRGNEFEQLKRNPQQMMQKMKGAIDPSMLQKLGGMDN 473
Query: 474 LQNLMKQMG 482
+ N+MKQMG
Sbjct: 474 VMNMMKQMG 482
>gi|386697161|gb|AFJ22041.1| signal recognition particle protein 54k, partial [Fusohericia sp.
AD660]
Length = 445
Score = 529 bits (1362), Expect = e-147, Method: Compositional matrix adjust.
Identities = 265/446 (59%), Positives = 341/446 (76%), Gaps = 11/446 (2%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI +AL+++DV LV++++ N+K +++ D++AAG NKRR+I A+F EL K+L
Sbjct: 1 LDSLLKEICKALIESDVNILLVKKLRENVKSVIDFDEMAAGLNKRRMIMTAVFQELVKLL 60
Query: 88 DPG-KPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFD 146
D K F P +GKP+VIMFVGLQG GKTTTCTK AY++ +KGWK ALVCADTFRAGAFD
Sbjct: 61 DSDVKEPFQPVRGKPNVIMFVGLQGIGKTTTCTKMAYHYMRKGWKCALVCADTFRAGAFD 120
Query: 147 QLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMR 206
QLKQNATKA+IPFYGSYTESDPV IA EGVE F EN D+IIVDTSGRHKQE++LFEEM
Sbjct: 121 QLKQNATKARIPFYGSYTESDPVVIAHEGVEKFTNENFDIIIVDTSGRHKQESSLFEEML 180
Query: 207 QVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAA 266
+S A + P+LV++VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAA
Sbjct: 181 AISSA-IQPNLVVYVMDASIGQACESQARAFKSKVDVGAIIVTKLDGHAKGGGALSAVAA 239
Query: 267 TKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSE 326
TKSP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK++E + ++ EL++KL
Sbjct: 240 TKSPIIFIGTGEHIDEFEPFKVRPFISKLLGMGDIEGLIDKVNE-LKLEDNEELIEKLKH 298
Query: 327 GNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTN 386
G FTLR MYEQ NI+KMGP Q+ +M+PGF +EL E ES +++KR MT+MDSM++
Sbjct: 299 GEFTLRDMYEQLTNIMKMGPFNQILNMIPGFGAELSKCTSEAESMSRLKRMMTIMDSMSD 358
Query: 387 EELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLK-IPKKG 442
ELDS KL + +RI+R+ARG+G REV E+L +Y + A + KM G+K + K G
Sbjct: 359 PELDSREGAKLFSKQATRIVRVARGAGVTQREVQELLSQYTKFATVVKKMGGIKGLFKSG 418
Query: 443 EMSALSRNMNAQHMSKVLPQGMLKQI 468
+ L++N+N M+K L Q M K I
Sbjct: 419 D---LAKNVNPNQMAK-LNQHMAKMI 440
>gi|386697199|gb|AFJ22060.1| signal recognition particle protein 54k, partial [Glycyphagus
hypudaei complex sp. PBK-2011]
Length = 444
Score = 528 bits (1361), Expect = e-147, Method: Compositional matrix adjust.
Identities = 261/445 (58%), Positives = 340/445 (76%), Gaps = 10/445 (2%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI +AL+++DV LV++++ N++ +++ +++AAG NKRR+I A++ EL K+L
Sbjct: 1 LDTLLKEICKALIESDVNIMLVKQLRENVRSVIDFEEMAAGLNKRRMIMTAVYQELVKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG ++ P KGK ++IMFVGLQG GKTTTCTK AY++ +KGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPGVQAYQPVKGKANIIMFVGLQGIGKTTTCTKMAYHYMRKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGV+ F KEN ++IIVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIATEGVDKFTKENFEIIIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAAT 267
+S AT P L+++VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAAT
Sbjct: 181 ISAAT-QPHLIVYVMDASIGQACEAQARAFKSKVDVGAIIVTKLDGHAKGGGALSAVAAT 239
Query: 268 KSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEG 327
KSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E + +D EL++KL G
Sbjct: 240 KSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVNE-LKLDDNEELIEKLKHG 298
Query: 328 NFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNE 387
FTLR MYEQ NI+KMGP Q+ +M+PGF +EL E ES +++KR MT+MDSM++
Sbjct: 299 EFTLRDMYEQLTNIMKMGPFNQILNMIPGFGAELSKCTSEAESMSRLKRMMTIMDSMSDG 358
Query: 388 ELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLK-IPKKGE 443
ELDS KL + +RI+R+ RG+G REV E+L +Y + A + KM G+K + K GE
Sbjct: 359 ELDSREGAKLFSKQPTRIVRVGRGAGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKPGE 418
Query: 444 MSALSRNMNAQHMSKVLPQGMLKQI 468
++N+N M+K L Q M K I
Sbjct: 419 ---FTKNVNPAQMAK-LNQQMAKMI 439
>gi|386697223|gb|AFJ22072.1| signal recognition particle protein 54k, partial [Acotyledon
paradoxa]
Length = 433
Score = 528 bits (1361), Expect = e-147, Method: Compositional matrix adjust.
Identities = 258/436 (59%), Positives = 335/436 (76%), Gaps = 9/436 (2%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL+++DV LV++++ N++ +++ D++AAG NKRR+I A+F EL K+L
Sbjct: 1 LDNMLKEICAALIESDVNIVLVKQLRENVRSVIDFDEMAAGLNKRRMIMMAVFQELVKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG ++ P KGK +VIMFVGLQG GKTTTCTK AY++ +KGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPGVKAYQPVKGKTNVIMFVGLQGIGKTTTCTKMAYHYMRKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAAT 267
+S A V P +++VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAAT
Sbjct: 181 IS-AAVQPQQIVYVMDASIGQACEAQARAFKSKVDVGAIIVTKLDGHAKGGGALSAVAAT 239
Query: 268 KSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEG 327
KSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E + +D EL++KL G
Sbjct: 240 KSPIIFIGTGEHIDEFEAFKVKPFISKLLGMGDIEGLIDKVNE-LKLDDNEELIEKLKHG 298
Query: 328 NFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNE 387
FTLR MYEQ NI+KMGP Q+ +M+PGF +EL E ES +++KR MT+MDSM++
Sbjct: 299 EFTLRDMYEQLTNIMKMGPFNQILNMIPGFGAELSKCTSEAESMSRLKRMMTIMDSMSDP 358
Query: 388 ELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLK-IPKKGE 443
ELDS KL + +RI+R++RGSG REV E+L +Y + A + KM G+K + K G+
Sbjct: 359 ELDSREGAKLFSKQPTRIVRVSRGSGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKTGD 418
Query: 444 MSALSRNMNAQHMSKV 459
L++N+N M+K+
Sbjct: 419 ---LTKNVNPNQMAKL 431
>gi|386697313|gb|AFJ22117.1| signal recognition particle protein 54k, partial [Plutarchusia
chelopus]
gi|386697315|gb|AFJ22118.1| signal recognition particle protein 54k, partial [Syringobiidae
gen. sp. AD850]
Length = 444
Score = 528 bits (1361), Expect = e-147, Method: Compositional matrix adjust.
Identities = 258/445 (57%), Positives = 342/445 (76%), Gaps = 10/445 (2%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL+++DV LV++++ N++ +++ D++AAG NKR++I A+F L K+L
Sbjct: 1 LDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGLNKRKMIMTAVFRNLVKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG P++ P KGKP+++MFVGLQG GKTTTCTK AYY+ +KGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPGVPAWQPIKGKPNIVMFVGLQGIGKTTTCTKMAYYYMRKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNA KA+IPFYGSYTESDPV IA EGVE FK+E ++IIVDTSGRHKQE +LFEEM
Sbjct: 121 LKQNAHKARIPFYGSYTESDPVVIASEGVEKFKEEGFEIIIVDTSGRHKQENSLFEEMLA 180
Query: 208 VSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAAT 267
+ +A + P+LV++VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAAT
Sbjct: 181 I-QAAIQPNLVVYVMDASIGQACESQAKAFKNKVDVGAIIVTKLDGHAKGGGALSAVAAT 239
Query: 268 KSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEG 327
KSP+IFIGTGEH+DEFE F+V+PF+S+LLGMGD G +D+++E + ++ EL++KL G
Sbjct: 240 KSPIIFIGTGEHIDEFEPFEVEPFISKLLGMGDIKGLIDRVNE-LKLEDNEELIEKLKHG 298
Query: 328 NFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNE 387
FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES +++KR +T+MDSM++
Sbjct: 299 EFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAESMSRLKRMLTIMDSMSDS 358
Query: 388 ELDS-SNPKLMN--DSRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLK-IPKKGE 443
ELDS KL + +RI+R+ARGSG REV E+L +Y + A + KM G+K + K G+
Sbjct: 359 ELDSREGAKLFSKQQTRIVRVARGSGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGD 418
Query: 444 MSALSRNMNAQHMSKVLPQGMLKQI 468
L++N+N M+K L Q M K I
Sbjct: 419 ---LAKNVNPAQMAK-LNQQMAKMI 439
>gi|386697133|gb|AFJ22027.1| signal recognition particle protein 54k, partial [Tortonia sp.
AD560]
Length = 432
Score = 528 bits (1360), Expect = e-147, Method: Compositional matrix adjust.
Identities = 255/436 (58%), Positives = 337/436 (77%), Gaps = 9/436 (2%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL+++DV LV++++ N++ +++ D++AAG NKRR+I A+F EL K+L
Sbjct: 1 LDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGLNKRRMIMMAVFKELVKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG ++ P KG+ +VIMFVGLQG GKTTTCTK AYY+ +KGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPGVKAWQPVKGRTNVIMFVGLQGIGKTTTCTKMAYYYLRKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGV+ F EN +++IVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIASEGVDKFTNENFEIVIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAAT 267
+ +A + P+LV++VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAAT
Sbjct: 181 I-QAAIQPNLVVYVMDASIGQACEGQAKAFKSKVDVGAIIVTKLDGHAKGGGALSAVAAT 239
Query: 268 KSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEG 327
KSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E + +D EL++KL G
Sbjct: 240 KSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE-LKLDDNEELIEKLKHG 298
Query: 328 NFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNE 387
FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES +++KR MT+MDSM++
Sbjct: 299 EFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDS 358
Query: 388 ELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLK-IPKKGE 443
ELDS KL + +RI+R++RG+G REV E+L +Y + A + KM G+K + K G+
Sbjct: 359 ELDSREGAKLFSKQPTRIVRVSRGAGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGD 418
Query: 444 MSALSRNMNAQHMSKV 459
L++N+N M+K+
Sbjct: 419 ---LAKNVNPAQMAKL 431
>gi|386697685|gb|AFJ22303.1| signal recognition particle protein 54k, partial [Trichoecius
tenax]
Length = 433
Score = 528 bits (1360), Expect = e-147, Method: Compositional matrix adjust.
Identities = 257/436 (58%), Positives = 334/436 (76%), Gaps = 9/436 (2%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL+++DV KLV++++ N++ +++ +++AAG NKRR+I A+F EL K+L
Sbjct: 1 LDSLLKEICTALIESDVNIKLVKQLRENVRSVIDFNEMAAGLNKRRMIMMAVFKELVKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG ++ P KG+ +VIMFVGLQG GKTTTCTK AYY+ KKGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPGVKAWQPVKGRTNVIMFVGLQGIGKTTTCTKMAYYYMKKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IVDTSGRHKQE LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIVDTSGRHKQENTLFEEMLA 180
Query: 208 VSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAAT 267
+ +A + P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAAT
Sbjct: 181 I-QAAIQPNLVIYVMDASIGQACEAQAKAFKNKVDVGAIIVTKLDGHAKGGGALSAVAAT 239
Query: 268 KSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEG 327
SP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E + +D EL++KL G
Sbjct: 240 NSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVNE-LKLDDNEELIEKLKHG 298
Query: 328 NFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNE 387
FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES +++KR MT+MDSM++
Sbjct: 299 EFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDS 358
Query: 388 ELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLK-IPKKGE 443
ELDS KL + +RI+R++RG+G REV E+L +Y + A + KM G+K + K G+
Sbjct: 359 ELDSREGAKLFSKQPTRIIRVSRGAGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGD 418
Query: 444 MSALSRNMNAQHMSKV 459
L +N+N M+K+
Sbjct: 419 ---LMKNVNPTQMAKL 431
>gi|386697291|gb|AFJ22106.1| signal recognition particle protein 54k, partial [Geranolichus
canadensis]
Length = 444
Score = 528 bits (1359), Expect = e-147, Method: Compositional matrix adjust.
Identities = 259/445 (58%), Positives = 341/445 (76%), Gaps = 10/445 (2%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL+++DV LV++++ N++ +++ D++AAG NKR++I A+F EL ++L
Sbjct: 1 LDSLLKEICMALIESDVNIMLVKQLRENVRSVIDFDEMAAGLNKRKMIMTAVFKELVRLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DP + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPDVKVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIVIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAAT 267
+ +A + P+LV++VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAAT
Sbjct: 181 I-QAAIQPNLVVYVMDASIGQACESQARAFKNKVDVGAIIVTKLDGHAKGGGALSAVAAT 239
Query: 268 KSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEG 327
KSP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK++E + +D EL++KL G
Sbjct: 240 KSPIIFIGTGEHIDEFEPFKVRPFISKLLGMGDIEGLIDKVNE-LKLDDNEELIEKLKHG 298
Query: 328 NFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNE 387
FT+R MYEQ NI+KMGP Q+ +M+PGF ++L E+ES +++KR MT+MDSM++
Sbjct: 299 EFTIRDMYEQLTNIMKMGPFNQILNMIPGFGADLAKCASEEESMSRLKRMMTIMDSMSDS 358
Query: 388 ELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLK-IPKKGE 443
ELDS KL + +R++R+ARGSG REV E+L +Y + A + KM G+K + + G+
Sbjct: 359 ELDSREGAKLFSKQPTRLVRVARGSGVTQREVQELLSQYTKFAAVVKKMGGIKGLFRSGD 418
Query: 444 MSALSRNMNAQHMSKVLPQGMLKQI 468
L++N+N M+K L Q M K I
Sbjct: 419 ---LAKNVNPAQMAK-LNQQMAKMI 439
>gi|386697239|gb|AFJ22080.1| signal recognition particle protein 54k, partial [Askinasia
antillarum]
Length = 446
Score = 527 bits (1358), Expect = e-147, Method: Compositional matrix adjust.
Identities = 265/447 (59%), Positives = 340/447 (76%), Gaps = 12/447 (2%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL+++DV LV++++ N++ +++ D++AAG NKRR+I A+F EL K+L
Sbjct: 1 LDNMLKEICAALIESDVNILLVKKLRENVRSVIDFDEMAAGLNKRRMIMMAVFQELVKLL 60
Query: 88 DPGKPSFTPKKG--KPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAF 145
DPG ++ P K K +VIMFVGLQG GKTTTCTK AYY+ +KGWK ALVCADTFRAGAF
Sbjct: 61 DPGVKAWQPVKANFKTNVIMFVGLQGIGKTTTCTKMAYYYMRKGWKCALVCADTFRAGAF 120
Query: 146 DQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEM 205
DQLKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IVDTSGRHKQE++LFEEM
Sbjct: 121 DQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIVDTSGRHKQESSLFEEM 180
Query: 206 RQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVA 265
+S A V P+L+++VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVA
Sbjct: 181 LAIS-AAVQPNLIVYVMDASIGQACEAQARAFKSKVDVGAIIVTKLDGHAKGGGALSAVA 239
Query: 266 ATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLS 325
ATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E + +D EL++KL
Sbjct: 240 ATKSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE-LKLDDNEELIEKLK 298
Query: 326 EGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMT 385
G FTLR MYEQ NI+KMGP Q+ +M+PGF +EL E ES +++KR MT+MDSM+
Sbjct: 299 HGEFTLRDMYEQLTNIMKMGPFNQILNMIPGFGAELSKCTSEAESMSRLKRMMTIMDSMS 358
Query: 386 NEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLK-IPKK 441
+ ELDS KL + +RI+RIARGSG REV E+L +Y + A + KM G+K + K
Sbjct: 359 DAELDSREGAKLFSKQPTRIVRIARGSGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKS 418
Query: 442 GEMSALSRNMNAQHMSKVLPQGMLKQI 468
G+ L++N+N M+K L Q M + I
Sbjct: 419 GD---LTKNVNPAQMAK-LNQQMARMI 441
>gi|386697299|gb|AFJ22110.1| signal recognition particle protein 54k, partial [Kakapolichus sp.
n. AD881]
Length = 444
Score = 527 bits (1358), Expect = e-147, Method: Compositional matrix adjust.
Identities = 259/445 (58%), Positives = 340/445 (76%), Gaps = 10/445 (2%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI +AL+++DV LV++++ N++ +++ D++AAG NKR++I A+F EL ++L
Sbjct: 1 LDSLLKEICKALIESDVNITLVKQLRENVRSVIDFDEMAAGLNKRKMIMTAVFKELVRLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DP + P KGK +VIMFVGLQG GKTTTCTK AYY+ +KGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPDVKVWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMRKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEVVIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAAT 267
+ +A + P+LV++VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAAT
Sbjct: 181 I-QAAIQPNLVVYVMDASIGQACESQARAFKDKVDVGAIIVTKLDGHAKGGGALSAVAAT 239
Query: 268 KSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEG 327
KSP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK++E + +D EL++KL G
Sbjct: 240 KSPIIFIGTGEHIDEFEPFKVRPFISKLLGMGDIEGLIDKVNE-LKLDDNEELIEKLKHG 298
Query: 328 NFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNE 387
FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES +++KR MT+MDSM++
Sbjct: 299 EFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDS 358
Query: 388 ELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLK-IPKKGE 443
ELDS KL + +R++R+ARGSG REV E+L +Y + A + KM G+K + K G+
Sbjct: 359 ELDSREGAKLFSKQPTRMIRVARGSGVTGREVQELLSQYTKFAAVVKKMGGIKGLFKSGD 418
Query: 444 MSALSRNMNAQHMSKVLPQGMLKQI 468
L++N+N M+K L Q M K I
Sbjct: 419 ---LAKNVNPAQMAK-LNQQMAKMI 439
>gi|386697225|gb|AFJ22073.1| signal recognition particle protein 54k, partial [Aleuroglyphus
ovatus]
Length = 433
Score = 527 bits (1358), Expect = e-147, Method: Compositional matrix adjust.
Identities = 258/436 (59%), Positives = 335/436 (76%), Gaps = 9/436 (2%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL+++DV LV++++ N++ +++ D++AAG NKRR+I A+F EL K+L
Sbjct: 1 LDNMLKEICAALIESDVNIILVKKLRENVRSVIDFDEMAAGLNKRRMIMMAVFQELVKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG ++ P KGK +VIMFVGLQG GKTTTCTK AY++ +KGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPGVKAYQPVKGKTNVIMFVGLQGIGKTTTCTKMAYHYMRKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAAT 267
+S A V P +++VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAAT
Sbjct: 181 IS-AAVQPHQIVYVMDASIGQACEAQARAFKSKVDVGAIIVTKLDGHAKGGGALSAVAAT 239
Query: 268 KSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEG 327
KSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E + +D EL++KL G
Sbjct: 240 KSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE-LKLDDNEELIEKLKHG 298
Query: 328 NFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNE 387
FTLR MYEQ NI+KMGP Q+ +M+PGF +EL E ES +++KR MT+MDSM +
Sbjct: 299 EFTLRDMYEQLTNIMKMGPFNQILNMIPGFGAELSKCTSEAESMSRLKRMMTIMDSMADS 358
Query: 388 ELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLK-IPKKGE 443
ELDS KL + +RI+R+ARG+G REV E+L +Y + A++ KM G+K + K G+
Sbjct: 359 ELDSREGAKLFSKQPTRIVRVARGAGVTQREVQELLSQYTKFAQVVKKMGGIKGLFKSGD 418
Query: 444 MSALSRNMNAQHMSKV 459
L++N+N M+K+
Sbjct: 419 ---LAKNVNPAQMAKL 431
>gi|386697107|gb|AFJ22014.1| signal recognition particle protein 54k, partial [Bonomoia sp.
AD653]
Length = 444
Score = 527 bits (1358), Expect = e-147, Method: Compositional matrix adjust.
Identities = 260/436 (59%), Positives = 336/436 (77%), Gaps = 9/436 (2%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL++ADV LV++++ N+K +++ D++AAG NKRR+I A+F ELCK+L
Sbjct: 1 LDNMLKEICAALIEADVNILLVKKLRENVKNVIDFDEMAAGLNKRRMIMMAVFKELCKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG +TP KG+ +V+MFVGLQG GKTTT TK AYY+QK+G K ALVCADTFRAGAFDQ
Sbjct: 61 DPGVKQWTPVKGRTNVVMFVGLQGIGKTTTVTKMAYYYQKRGLKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IP+YGSYTESDPV IA EGV FK++ DL+IVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPYYGSYTESDPVIIAAEGVRIFKEKGFDLVIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAAT 267
+ AT NPDLVI+VMD+SIGQA QA+AFK V +GA+IVTK+DGHA+GGGALSAVAAT
Sbjct: 181 IQAAT-NPDLVIYVMDASIGQACEAQAKAFKSKVDIGAIIVTKLDGHARGGGALSAVAAT 239
Query: 268 KSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEG 327
KSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G ++K++E + +D+ EL+ KL G
Sbjct: 240 KSPIIFIGTGEHIDEFEPFRVKPFISKLLGMGDIEGLIEKVNE-LKLDENEELINKLKHG 298
Query: 328 NFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNE 387
FTLR MYEQ NI+KMGP Q+ SM+PGF EL + ES A++KR +T+MDSM++
Sbjct: 299 EFTLRDMYEQLSNIMKMGPFNQILSMIPGFGPELTRNTSDAESAARLKRMLTIMDSMSDS 358
Query: 388 ELDS-SNPKLMN--DSRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLK-IPKKGE 443
ELDS KL N +RI R+A G+G REV E+L +Y + A++ KM G+K + K+G+
Sbjct: 359 ELDSREGAKLFNRQPNRITRVAAGAGVWRREVQELLSQYGKFAQMVKKMGGMKGLFKQGD 418
Query: 444 MSALSRNMNAQHMSKV 459
+S+N+N M+K+
Sbjct: 419 ---ISKNINPMQMAKL 431
>gi|348677486|gb|EGZ17303.1| hypothetical protein PHYSODRAFT_360478 [Phytophthora sojae]
Length = 511
Score = 527 bits (1357), Expect = e-147, Method: Compositional matrix adjust.
Identities = 262/490 (53%), Positives = 368/490 (75%), Gaps = 12/490 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LG + A+ +++ T++D++V + L EI ALL++DVQ KLVR+++ N+K V
Sbjct: 1 MVLAELGSKLQGALAKLNRTTVVDDEVFSALLKEICGALLESDVQVKLVRQLRDNVKLAV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+L+D ++G N+RR+IQ+++ ++L +ML+P + KKG+ +VIMFVGLQGSGKTT+ K
Sbjct: 61 SLEDASSGVNRRRLIQKSVVDQLVQMLEPEAQPYKMKKGQSNVIMFVGLQGSGKTTSIAK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
+A+++Q+KGWK +VCADTFRAGAFDQLKQN+TK +IPFYGSYTE+DPVRIA EGV F+
Sbjct: 121 FAHHYQRKGWKTCMVCADTFRAGAFDQLKQNSTKLRIPFYGSYTEADPVRIAEEGVAQFR 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
EN +LI+VDTSGRHKQEA LF EMR+VS A V PD V+FVMDS+IGQA FDQA AF+++
Sbjct: 181 AENYELILVDTSGRHKQEADLFAEMREVS-AAVQPDDVVFVMDSTIGQAVFDQASAFRET 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V VG+VI+TK+DGHAKGGGALSAVAAT SP+IF GTGEH +FE F+ + FVSRL+GMGD
Sbjct: 240 VDVGSVIITKLDGHAKGGGALSAVAATGSPIIFYGTGEHFADFESFNAQSFVSRLMGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFS-- 358
G M+++ +D Q E+++K +G FTLR MY+QFQ+++KMGP+ +V SM+PG
Sbjct: 300 IRGLMEEVKTSGMLDNQEEMVEKFQKGVFTLRDMYKQFQSVMKMGPLSKVMSMIPGLPQG 359
Query: 359 -SELMP-KGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREV 416
SE+M G E+E+ +++R++ MMDSMT+ ELD P +++SR R+ARGSG Q+ EV
Sbjct: 360 MSEMMNMGGGEEEASKRLRRFLFMMDSMTDAELDGIVP--LSESRQTRVARGSGCQLYEV 417
Query: 417 MEMLEEYKRLAKIWSKMKGLKIPKKGEMS---ALSRNMNA--QHMSKVLPQGMLKQIGGV 471
+L+ +K+ A + S+M + K G+ + ++RN NA Q +SKV+ M+ Q+GG
Sbjct: 418 EFLLKCHKQFATVVSRMGKSGLMKTGDAALGKQMARNPNAVMQQLSKVMDPKMMAQMGGP 477
Query: 472 GGLQNLMKQM 481
+ +MKQM
Sbjct: 478 QNMMRMMKQM 487
>gi|386697267|gb|AFJ22094.1| signal recognition particle protein 54k, partial [Freyana anatina]
Length = 433
Score = 527 bits (1357), Expect = e-147, Method: Compositional matrix adjust.
Identities = 253/436 (58%), Positives = 337/436 (77%), Gaps = 9/436 (2%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL+++DV LV++++ N++ +++ D++AAG NKR++I A+F EL ++L
Sbjct: 1 LDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGLNKRKMIMTAVFKELVRLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG ++ P KGK ++IMFVGLQG GKTTTCTK AYY+ +KGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPGVKAWQPAKGKTNIIMFVGLQGIGKTTTCTKMAYYYMRKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGV+ F KEN +++IVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIASEGVDKFTKENFEIVIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAAT 267
+ +A + P+LV++VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAAT
Sbjct: 181 I-QAAIQPNLVVYVMDASIGQACESQARAFKNKVDVGAIIVTKLDGHAKGGGALSAVAAT 239
Query: 268 KSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEG 327
SP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK++E + +D EL++KL G
Sbjct: 240 NSPIIFIGTGEHIDEFEPFKVRPFISKLLGMGDIEGLIDKVNE-LKLDDNGELIEKLKHG 298
Query: 328 NFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNE 387
FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES +++K+ MT+MDSM++
Sbjct: 299 EFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAESMSRLKQMMTIMDSMSDS 358
Query: 388 ELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLK-IPKKGE 443
ELDS KL + +RI+R+ARGSG REV E+L +Y + A + KM G+K + K G+
Sbjct: 359 ELDSREGAKLFSKQPTRIVRVARGSGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGD 418
Query: 444 MSALSRNMNAQHMSKV 459
L++N+N M+K+
Sbjct: 419 ---LAKNVNPAQMAKL 431
>gi|354498655|ref|XP_003511430.1| PREDICTED: signal recognition particle 54 kDa protein, partial
[Cricetulus griseus]
Length = 385
Score = 527 bits (1357), Expect = e-147, Method: Compositional matrix adjust.
Identities = 246/387 (63%), Positives = 315/387 (81%), Gaps = 2/387 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNATII+E+VLN L E+ ALL+ADV KLV++++ N+K +
Sbjct: 1 MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENVKSAI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+L+++A+G NKR++IQ A+F EL K++DPG ++TP KGK +VIMFVGLQGSGKTTTC+K
Sbjct: 61 DLEEMASGLNKRKMIQHAVFKELVKLVDPGVKAWTPTKGKQNVIMFVGLQGSGKTTTCSK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY+Q+KGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGV+ FK
Sbjct: 121 LAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGVDKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
EN ++IIVDTSGRHKQE +LFEEM QVS A + PD +++VMD+SIGQA QA+AFK
Sbjct: 181 NENFEIIIVDTSGRHKQEDSLFEEMLQVSNA-IQPDNIVYVMDASIGQACEAQAKAFKDK 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V V +VIVTK+DGHAKGGGALSAVAATKSP+IFIGTGEH+D+FE F +PF+S+LLGMGD
Sbjct: 240 VDVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G +DK++E + +D L++KL G FTLR MYEQFQNI+KMGP Q+ M+PGF ++
Sbjct: 300 IEGLIDKVNE-LKLDDNEALIEKLKHGQFTLRDMYEQFQNIMKMGPFSQILGMIPGFGTD 358
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNE 387
M KG E+ES A++K+ MT+MDSM ++
Sbjct: 359 FMSKGNEQESMARLKKLMTIMDSMNDQ 385
>gi|449018117|dbj|BAM81519.1| signal recognition particle recognition component SRP54
[Cyanidioschyzon merolae strain 10D]
Length = 502
Score = 526 bits (1356), Expect = e-147, Method: Compositional matrix adjust.
Identities = 259/497 (52%), Positives = 358/497 (72%), Gaps = 14/497 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I +A+Q ++N ++DE L L E+ RALL+ADV K V E++ +K V
Sbjct: 1 MVLETLGTKIVKALQSLTNQVVVDETALEAALKEVARALLEADVNVKQVSELRQRVKNRV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
L +L G N+RR+I + +F ELC+MLDPG P + P++G+ +VIMFVGLQG+GKTT+C K
Sbjct: 61 RLAELPPGTNRRRLIHKTVFEELCRMLDPGIPPYRPQRGQSNVIMFVGLQGNGKTTSCVK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++++KG++ LVCADTFRAGAFDQL+QNAT+A++PFYG Y E+D V++A EGVE F+
Sbjct: 121 VAYFYKRKGYRTGLVCADTFRAGAFDQLRQNATRARVPFYGRYGETDAVKVASEGVERFR 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
+E ++I+VDTSGRHKQEAALF EM Q+ A + PD VIFVMD SIGQAA+DQA+AF+Q
Sbjct: 181 REGFEVILVDTSGRHKQEAALFAEMEQLDRA-LTPDHVIFVMDGSIGQAAYDQARAFQQR 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V VG+VI+TKMDGHA+GGGALSAVAAT SP++F+GTGEH+D+ E F V+ FV RLLGMGD
Sbjct: 240 VRVGSVILTKMDGHARGGGALSAVAATHSPIVFLGTGEHLDDLEEFQVQSFVGRLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G + I E + E + ++S+G TLR M Q+ N+L++GP+ +V SM+PG +E
Sbjct: 300 VRGLVSTIAEADLENPDEEQMNRISQGILTLRDMQMQYSNVLRLGPLSKVASMMPGM-AE 358
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEML 420
++PKG EK++Q +++ + ++DSM EELD S +DSR RIARGSGR V+EV E+L
Sbjct: 359 ILPKGSEKDAQTRVRNMLVILDSMNREELDESTSVRWDDSRKRRIARGSGRSVQEVDEVL 418
Query: 421 EEYKRLAKIWSK----MKGLKIPKKGEMSALSR-----NMNA--QHMSKVLPQGMLKQIG 469
+YK ++K WS+ MK L P G + + N+ A Q M +++ ML+Q+G
Sbjct: 419 TQYKLISKAWSRIGKNMKHLMQPGHGGVGHGTGPNSIPNIGAMEQQMQRMMDPRMLQQLG 478
Query: 470 -GVGGLQNLMKQMGSTK 485
G GGLQ +M+Q+ S +
Sbjct: 479 SGPGGLQRVMQQLMSGR 495
>gi|386697123|gb|AFJ22022.1| signal recognition particle protein 54k, partial [Histiostoma
inquilinum]
Length = 432
Score = 526 bits (1356), Expect = e-147, Method: Compositional matrix adjust.
Identities = 260/436 (59%), Positives = 336/436 (77%), Gaps = 9/436 (2%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI ALL+ADV LV++++ N++ +++ D++AAG NKRR+I A+F ELCK+L
Sbjct: 1 LDNMLKEICAALLEADVNILLVKKLRENVRNVIDFDEMAAGLNKRRMIMMAVFQELCKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG + P KG+ +V+MFVGLQG GKTTT TK AY++ KKGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPGVKQWQPVKGRTNVVMFVGLQGIGKTTTVTKMAYHYMKKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA +GV F KEN +++IVDTSGRHKQE +LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVIIAADGVSKFAKENFEIVIVDTSGRHKQENSLFEEMLA 180
Query: 208 VSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAAT 267
+ AT +PDLV++VMD+SIGQA QA+AFK V +GA+IVTK+DGHAKGGGALSAVAAT
Sbjct: 181 IQAAT-SPDLVVYVMDASIGQACEAQAKAFKSKVDIGAIIVTKLDGHAKGGGALSAVAAT 239
Query: 268 KSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEG 327
KSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E + ++ EL++KL G
Sbjct: 240 KSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE-LKLEDNEELIEKLKHG 298
Query: 328 NFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNE 387
FTLR MYEQ NI+KMGP Q+ +M+PGF EL E ES A++KR MT+MDSM++
Sbjct: 299 EFTLRDMYEQLTNIMKMGPFNQILNMIPGFGPELSKCTSEAESAARLKRMMTIMDSMSDN 358
Query: 388 ELDS-SNPKLMN--DSRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLK-IPKKGE 443
ELDS KL N +RI+R+ARG+G REV E+L +Y + A++ KM G+K + K+G+
Sbjct: 359 ELDSREGAKLFNRQPNRIVRVARGAGVFRREVQELLSQYTKFAQMVKKMGGMKGLFKQGD 418
Query: 444 MSALSRNMNAQHMSKV 459
L++N+N M+K+
Sbjct: 419 ---LAKNVNPMQMAKL 431
>gi|386697197|gb|AFJ22059.1| signal recognition particle protein 54k, partial [Marsupialichus
brasiliensis]
Length = 433
Score = 526 bits (1355), Expect = e-146, Method: Compositional matrix adjust.
Identities = 256/436 (58%), Positives = 336/436 (77%), Gaps = 9/436 (2%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI +AL+++DV LV++++ N++ +++ +++AAG NKRR+I A++ EL K+L
Sbjct: 1 LDTLLKEICKALIESDVNIMLVKQLRENVRSVIDFEEMAAGLNKRRMIMTAVYQELVKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG ++ P KGK ++IMFVGLQG GKTTTCTK AY++ +KGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPGVQAWQPVKGKANIIMFVGLQGIGKTTTCTKMAYHYMRKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGVE F EN ++IIVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIATEGVEKFINENFEIIIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAAT 267
+S AT P L+++VMD+SIGQA +QA+AFK V VGA+IVTK+DGHAKGGGALSAVAAT
Sbjct: 181 ISAAT-QPHLIVYVMDASIGQACENQARAFKSKVDVGAIIVTKLDGHAKGGGALSAVAAT 239
Query: 268 KSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEG 327
KSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E + +D EL++KL G
Sbjct: 240 KSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE-LKLDDNEELIEKLKHG 298
Query: 328 NFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNE 387
FTLR MYEQ NI+KMGP Q+ +M+PGF +EL E ES +++KR MT+MDSM++
Sbjct: 299 EFTLRDMYEQLTNIMKMGPFNQILNMIPGFGAELSKCTSEAESMSRLKRMMTIMDSMSDS 358
Query: 388 ELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLK-IPKKGE 443
ELDS KL + +RI+R+ RG+G REV E+L +Y + A + KM G+K + K GE
Sbjct: 359 ELDSREGAKLFSKQPTRIIRVGRGAGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKPGE 418
Query: 444 MSALSRNMNAQHMSKV 459
++N+N M+K+
Sbjct: 419 ---FTKNVNPAQMAKL 431
>gi|410898716|ref|XP_003962843.1| PREDICTED: signal recognition particle 54 kDa protein-like isoform
2 [Takifugu rubripes]
Length = 455
Score = 526 bits (1354), Expect = e-146, Method: Compositional matrix adjust.
Identities = 261/444 (58%), Positives = 343/444 (77%), Gaps = 18/444 (4%)
Query: 60 VNLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCT 119
++L+++A+G NKRR+IQ A+F EL K++DPG ++TP KGK +VIMFVGLQGSGKTTTC+
Sbjct: 11 IDLEEMASGLNKRRMIQHAVFKELVKLVDPGVKAWTPTKGKNNVIMFVGLQGSGKTTTCS 70
Query: 120 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
K AYY+Q+KGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGV+ F
Sbjct: 71 KLAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVVIATEGVDKF 130
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQ 239
K EN ++IIVDTSGRHKQE +LFEEM QVS A V PD +++VMD+SIGQA QA+AFK
Sbjct: 131 KMENFEIIIVDTSGRHKQEDSLFEEMLQVSNA-VQPDNIVYVMDASIGQACESQAKAFKD 189
Query: 240 SVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMG 299
V V +VIVTK+DGHAKGGGALSAVAAT+SP+IFIGTGEH+D+FE F +PF+S+LLGMG
Sbjct: 190 KVDVASVIVTKLDGHAKGGGALSAVAATRSPIIFIGTGEHIDDFEPFKTQPFISKLLGMG 249
Query: 300 DWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSS 359
D G +D++++ + +D EL+ KL G FTLR MYEQFQNI+KMGP GQ+ M+PGF +
Sbjct: 250 DIEGLIDRVND-LKLDDNEELIDKLKHGQFTLRDMYEQFQNIMKMGPFGQIMGMIPGFGT 308
Query: 360 ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQVREV 416
+ M KG E+ES A++K+ MT+MDSM ++ELDS + KL + +RI R+ARGSG R+V
Sbjct: 309 DFMSKGNEQESMARLKKLMTIMDSMNDQELDSKDGAKLFSKQPNRIQRVARGSGVATRDV 368
Query: 417 MEMLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNA-------QHMSKVLPQGMLKQI 468
E+L +Y + A++ KM G+K + K G+M S+N+N Q M+K++ +L +
Sbjct: 369 QELLTQYTKFAQMVKKMGGIKGLFKGGDM---SKNVNPSQMAKLNQQMAKMMDPRVLHHM 425
Query: 469 GGVGGLQNLMKQM--GSTKDMMGM 490
GG+ GLQ++M+Q G+ +M GM
Sbjct: 426 GGMAGLQSMMRQFQQGAAGNMKGM 449
>gi|145514351|ref|XP_001443086.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124410447|emb|CAK75689.1| unnamed protein product [Paramecium tetraurelia]
Length = 507
Score = 525 bits (1353), Expect = e-146, Method: Compositional matrix adjust.
Identities = 260/489 (53%), Positives = 359/489 (73%), Gaps = 14/489 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIK--- 57
MVLA+LG SI+ A+Q+++ A ++DE ++++ L EI ALL+ADV K +++++ ++K
Sbjct: 1 MVLAELGKSINAALQKLNKAPVVDEALVDQILGEIAMALLKADVNAKFIKKLREDVKMEF 60
Query: 58 KIVNLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTT 117
K+ +++ N +++IQ+A+ + L +ML+ + F PKKGK +VIMFVGLQGSGKTTT
Sbjct: 61 KLCEEENI----NHQKLIQKAVVDGLTRMLESDRKPFQPKKGKQNVIMFVGLQGSGKTTT 116
Query: 118 CTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVE 177
CTKYAYY+QKKGWK ALVCADTFRAGAFDQLKQNATK ++PFYGSYTE+DPV+I+ EGV
Sbjct: 117 CTKYAYYYQKKGWKVALVCADTFRAGAFDQLKQNATKVRVPFYGSYTEADPVQISQEGVN 176
Query: 178 TFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAF 237
FKKE ++IIVDTSGRHKQE LFEEM+QV EA V PD ++FVMDSSIGQA +DQA AF
Sbjct: 177 VFKKEAFEIIIVDTSGRHKQENDLFEEMKQV-EAAVKPDDIVFVMDSSIGQACYDQALAF 235
Query: 238 KQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLG 297
K++V+VG+VI+TK+DGHAKGGGALSAVAAT+SP++FIG GEH D+ E F+ FV RLLG
Sbjct: 236 KKAVNVGSVIITKLDGHAKGGGALSAVAATESPIVFIGEGEHFDDLESFEASSFVRRLLG 295
Query: 298 MGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGF 357
+GD + + +VV M QP+L+QKL EG F++R + QF ++LK+G + Q S +PG
Sbjct: 296 LGDINKLFQSVKDVVNMRDQPQLIQKLKEGKFSIRDLQTQFNSVLKLGSLNQFMSAIPGM 355
Query: 358 SSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVM 417
S ++ KG EKES +I+R++ +M+SMT +ELD +N RI+RIA+GSG + EV
Sbjct: 356 GSSVLSKGNEKESIKRIQRFLCIMNSMTADELDGEGN--LNFCRIVRIAKGSGTSIEEVH 413
Query: 418 EMLEEYKRLAKIWSKMKGLKIPKK--GEMSALSRNMNA--QHMSKVLPQGMLKQIGGVGG 473
+L+E+K+L+K+ + + K E L RN Q M + ML+++GG+
Sbjct: 414 ILLDEHKKLSKVVGNLAKTNLGGKRGNEFEQLKRNPQQMMQKMKGAIDPSMLQKLGGMDN 473
Query: 474 LQNLMKQMG 482
+ N+MKQMG
Sbjct: 474 VMNMMKQMG 482
>gi|386697391|gb|AFJ22156.1| signal recognition particle protein 54k, partial [Strelkoviacarus
quadratus]
Length = 444
Score = 525 bits (1352), Expect = e-146, Method: Compositional matrix adjust.
Identities = 262/445 (58%), Positives = 339/445 (76%), Gaps = 10/445 (2%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL+++DV LV++++ N++ +++ D++AAG NKRR+I A+F EL K+L
Sbjct: 1 LDNLLKEICTALIESDVNIVLVKQLRENVRSVIDFDEMAAGLNKRRMILTAVFKELYKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
D G + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKGW+ ALVCADTFRAGAFDQ
Sbjct: 61 DSGAKLWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKGWRCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +++IVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFEIVIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAAT 267
+ A + P+LVI+VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAAT
Sbjct: 181 IQSA-IQPNLVIYVMDASIGQACEAQAKAFKNKVDVGAIIVTKLDGHAKGGGALSAVAAT 239
Query: 268 KSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEG 327
KSP++FIGTGEH+D FE F VKPF+S+LLGMGD G +DK++E + ++ +LL+KL G
Sbjct: 240 KSPILFIGTGEHIDAFEPFKVKPFISKLLGMGDIEGLIDKVNE-LKLEDTEDLLEKLRHG 298
Query: 328 NFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNE 387
+FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES A++KR MT+MDS+++
Sbjct: 299 DFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAESMARLKRMMTIMDSLSDS 358
Query: 388 ELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLK-IPKKGE 443
ELDS KL + SR++R+ARG+G REV E+L +Y + A + KM G+K + K G+
Sbjct: 359 ELDSREGAKLFSKQPSRLVRVARGAGVPQREVQELLSQYTKFAAVVKKMGGIKGLFKSGD 418
Query: 444 MSALSRNMNAQHMSKVLPQGMLKQI 468
LS+N+N M+K L Q M K I
Sbjct: 419 ---LSKNVNPTQMAK-LNQQMAKMI 439
>gi|417410790|gb|JAA51861.1| Putative signal recognition particle subunit srp54, partial
[Desmodus rotundus]
Length = 448
Score = 525 bits (1351), Expect = e-146, Method: Compositional matrix adjust.
Identities = 260/446 (58%), Positives = 345/446 (77%), Gaps = 12/446 (2%)
Query: 57 KKIVNLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTT 116
+ ++L+++A+G NKR++IQ A+F EL K++DPG ++TP KGK +VIMFVGLQGSGKTT
Sbjct: 1 RSAIDLEEMASGLNKRKMIQHAVFKELVKLVDPGVKAWTPTKGKQNVIMFVGLQGSGKTT 60
Query: 117 TCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGV 176
TC+K AYY+Q+KGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGV
Sbjct: 61 TCSKLAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGV 120
Query: 177 ETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQA 236
E FK EN ++IIVDTSGRHKQE +LFEEM QV+ A + PD +++VMD+SIGQA QA+A
Sbjct: 121 EKFKNENFEIIIVDTSGRHKQEDSLFEEMLQVANA-IQPDNIVYVMDASIGQACEAQAKA 179
Query: 237 FKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLL 296
FK V V +VIVTK+DGHAKGGGALSAVAATKSP+IFIGTGEH+D+FE F +PF+S+LL
Sbjct: 180 FKDKVDVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLL 239
Query: 297 GMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPG 356
GMGD G +DK++E + +D L++KL G FTLR MYEQFQNI+KMGP Q+ M+PG
Sbjct: 240 GMGDIEGLIDKVNE-LKLDDNEALIEKLKHGQFTLRDMYEQFQNIMKMGPFSQILGMIPG 298
Query: 357 FSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQV 413
F ++ M KG E+ES A++K+ MT+MDSM ++ELDS++ K+ + RI R+ARGSG
Sbjct: 299 FGTDFMSKGNEQESMARLKKLMTIMDSMNDQELDSTDGAKVFSKQPGRIQRVARGSGVST 358
Query: 414 REVMEMLEEYKRLAKIWSKMKGLK-IPKKGEMSA-LSRNMNA---QHMSKVLPQGMLKQI 468
R+V E+L +Y + A++ KM G+K + K G+MS +S++ A Q M+K++ +L +
Sbjct: 359 RDVQELLTQYTKFAQMVKKMGGIKGLFKGGDMSKNVSQSQMAKLNQQMAKMMDPRVLHHM 418
Query: 469 GGVGGLQNLMKQM--GSTKDMMGMFG 492
GG+ GLQ++M+Q G+ +M GM G
Sbjct: 419 GGMAGLQSMMRQFQQGAAGNMKGMMG 444
>gi|386697195|gb|AFJ22058.1| signal recognition particle protein 54k, partial [Marmosopus sp.
AD727]
Length = 433
Score = 525 bits (1351), Expect = e-146, Method: Compositional matrix adjust.
Identities = 256/436 (58%), Positives = 336/436 (77%), Gaps = 9/436 (2%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL+++DV LV++++ N++ +++ +++AAG NKRR+I A+F EL K+L
Sbjct: 1 LDNMLKEICSALIESDVNIILVKQLRENVRSVIDFEEMAAGLNKRRMIMMAVFKELVKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG ++ P KGK +VIMFVGLQG GKTTTCTK AY++ +KGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPGVKAWQPIKGKTNVIMFVGLQGIGKTTTCTKMAYHYMRKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAAT 267
+S A V P+L+++VMD+SIGQA QA+AFK V VGA+I+TK+DGHAKGGGALSAVAAT
Sbjct: 181 IS-AAVQPNLIVYVMDASIGQACEAQARAFKSKVDVGAIIITKLDGHAKGGGALSAVAAT 239
Query: 268 KSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEG 327
KSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E + +D EL++KL G
Sbjct: 240 KSPIIFIGTGEHIDEFEPFKVKPFISKLLGMGDIEGLIDKVNE-LKLDDNEELIEKLKHG 298
Query: 328 NFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNE 387
FTLR MYEQ NI+KMGP Q+ +M+PGF +EL E ES +++KR MT+MDSM +
Sbjct: 299 EFTLRDMYEQLTNIMKMGPFNQILNMIPGFGAELSKCTSEAESMSRLKRMMTIMDSMADL 358
Query: 388 ELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLK-IPKKGE 443
ELDS KL + +RI+R++RG+G REV E+L +Y + A + KM G+K + K G+
Sbjct: 359 ELDSREGAKLFSKQPTRIVRVSRGAGVTQREVQELLTQYTKFAAVVKKMGGIKGLFKSGD 418
Query: 444 MSALSRNMNAQHMSKV 459
L++N+N M+K+
Sbjct: 419 ---LTKNVNPAQMAKL 431
>gi|386697159|gb|AFJ22040.1| signal recognition particle protein 54k, partial [Carpoglyphus
lactis]
Length = 434
Score = 524 bits (1350), Expect = e-146, Method: Compositional matrix adjust.
Identities = 259/437 (59%), Positives = 336/437 (76%), Gaps = 10/437 (2%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L +I +AL+++DV LV++++ N+K +++ D++AAG NKRR+I A+F EL K+L
Sbjct: 1 LDGLLKDICKALIESDVNIMLVKKLRENVKSVIDFDEMAAGLNKRRMIMTAVFQELVKLL 60
Query: 88 DPG-KPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFD 146
D K F P KGKP+VIMFVGLQG GKTTTCTK AY++ +KGWK ALVCADTFRAGAFD
Sbjct: 61 DSDVKEPFQPVKGKPNVIMFVGLQGIGKTTTCTKMAYHYMRKGWKCALVCADTFRAGAFD 120
Query: 147 QLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMR 206
QLKQNATKA+IPFYGSYTESDPV IA EGVE F EN ++IIVDTSGRHKQE++LFEEM
Sbjct: 121 QLKQNATKARIPFYGSYTESDPVVIAHEGVEKFVNENFEIIIVDTSGRHKQESSLFEEML 180
Query: 207 QVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAA 266
+S A + P+LV++VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAA
Sbjct: 181 AISSA-IQPNLVVYVMDASIGQACESQAKAFKSKVDVGAIIVTKLDGHAKGGGALSAVAA 239
Query: 267 TKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSE 326
TKSP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G +DK+ E + ++ EL++KL
Sbjct: 240 TKSPIIFIGTGEHIDEFEPFKVRPFISKLLGMGDIEGLIDKVSE-LKLEDNEELIEKLKH 298
Query: 327 GNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTN 386
G FTLR MYEQ NI+KMGP Q+ +M+PGF +EL E ES +++KR MT+MDSM++
Sbjct: 299 GEFTLRDMYEQLTNIMKMGPFNQILNMIPGFGAELSKCTSEAESMSRLKRMMTIMDSMSD 358
Query: 387 EELDS-SNPKLMN--DSRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLK-IPKKG 442
ELDS KL + +RI+R+ARG+G REV E+L +Y + A + KM G+K + K G
Sbjct: 359 SELDSREGAKLFSKQTTRIVRVARGAGVTQREVQELLAQYTKFATVVKKMGGIKGLFKSG 418
Query: 443 EMSALSRNMNAQHMSKV 459
+ L++N+N M+K+
Sbjct: 419 D---LTKNVNPNQMAKL 432
>gi|291403730|ref|XP_002718184.1| PREDICTED: signal recognition particle 54kDa isoform 2 [Oryctolagus
cuniculus]
Length = 455
Score = 524 bits (1350), Expect = e-146, Method: Compositional matrix adjust.
Identities = 259/448 (57%), Positives = 342/448 (76%), Gaps = 16/448 (3%)
Query: 57 KKIVNLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTT 116
+ ++L+++A+G NKR++IQ A+F EL K++DPG ++TP KGK +VIMFVGLQGSGKTT
Sbjct: 8 RSAIDLEEMASGLNKRKMIQHAVFKELVKLVDPGVKAWTPTKGKQNVIMFVGLQGSGKTT 67
Query: 117 TCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGV 176
TC+K AYY+Q+KGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGV
Sbjct: 68 TCSKLAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGV 127
Query: 177 ETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQA 236
E FK EN ++IIVDTSGRHKQE +LFEEM QV+ A + PD +++VMD+SIGQA QA+A
Sbjct: 128 EKFKNENFEIIIVDTSGRHKQEDSLFEEMLQVANA-IQPDNIVYVMDASIGQACEAQAKA 186
Query: 237 FKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLL 296
FK V V +VIVTK+DGHAKGGGALSAVAATKSP+IFIGTGEH+D+FE F +PF+S+LL
Sbjct: 187 FKDKVDVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLL 246
Query: 297 GMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPG 356
GMGD G +DK++E + +D L++KL G FTLR MYEQFQNI+KMGP Q+ M+PG
Sbjct: 247 GMGDIEGLIDKVNE-LKLDDNEALIEKLKHGQFTLRDMYEQFQNIMKMGPFSQILGMIPG 305
Query: 357 FSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQV 413
F ++ M KG E+ES A++K+ MT+MDSM ++ELDS++ K+ + RI R+ARGSG
Sbjct: 306 FGTDFMSKGNEQESMARLKKLMTIMDSMNDQELDSTDGAKVFSKQPGRIQRVARGSGVST 365
Query: 414 REVMEMLEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNA-------QHMSKVLPQGMLK 466
R+V E+L +Y + A++ KM G+K KG+ +S N+N Q M+K++ +L
Sbjct: 366 RDVQELLTQYTKFAQMVKKMGGIKGLFKGK--KISENVNQSPDAKLNQQMAKMMDPRVLH 423
Query: 467 QIGGVGGLQNLMKQM--GSTKDMMGMFG 492
+GG+ GLQ++M+Q G+ +M GM G
Sbjct: 424 HMGGMAGLQSMMRQFQQGAAGNMKGMMG 451
>gi|386697189|gb|AFJ22055.1| signal recognition particle protein 54k, partial [Aeroglyphus
robustus]
Length = 444
Score = 524 bits (1350), Expect = e-146, Method: Compositional matrix adjust.
Identities = 259/445 (58%), Positives = 337/445 (75%), Gaps = 10/445 (2%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL+++DV LV++++ N++ +++ +++AAG NKRR+I A+F EL K+L
Sbjct: 1 LDSLLKEICTALIESDVNIMLVKKLRENVRSVIDFEEMAAGLNKRRMIMMAVFTELVKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG + P KGK +VIMFVGLQG GKTTTCTK AYY+ +KGW+ ALVCADTFRAGAFDQ
Sbjct: 61 DPGVKPWQPVKGKVNVIMFVGLQGIGKTTTCTKMAYYYMRKGWRCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAAT 267
+S A + P+LV++VMD+SIGQA QA+AFK V VGA+I+TK+D HAKGGGALSAVAAT
Sbjct: 181 IS-AAIQPNLVVYVMDASIGQACEAQAKAFKSKVDVGAIIITKLDSHAKGGGALSAVAAT 239
Query: 268 KSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEG 327
KSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK+ E + +D EL++KL G
Sbjct: 240 KSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVSE-LKLDDNEELIEKLKHG 298
Query: 328 NFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNE 387
FT+R MYEQ NI+KMGP Q+ +M+PG +EL E ES +++KR MT+MDSM++
Sbjct: 299 EFTIRDMYEQLTNIMKMGPFNQILNMIPGIGAELSKCASEAESMSRLKRMMTIMDSMSDS 358
Query: 388 ELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLK-IPKKGE 443
ELDS KL + +RI+R++RGSG REV E+L +Y + A + KM G+K + K G+
Sbjct: 359 ELDSREGAKLFSKQPTRIVRVSRGSGVTQREVQELLSQYTKFAAVVKKMGGIKGLFKSGD 418
Query: 444 MSALSRNMNAQHMSKVLPQGMLKQI 468
L++N+N M+K L Q M K I
Sbjct: 419 ---LTKNVNPAQMAK-LNQQMAKMI 439
>gi|296214803|ref|XP_002753861.1| PREDICTED: signal recognition particle 54 kDa protein isoform 3
[Callithrix jacchus]
gi|345306152|ref|XP_003428427.1| PREDICTED: signal recognition particle 54 kDa protein-like isoform
2 [Ornithorhynchus anatinus]
Length = 455
Score = 524 bits (1350), Expect = e-146, Method: Compositional matrix adjust.
Identities = 260/446 (58%), Positives = 345/446 (77%), Gaps = 12/446 (2%)
Query: 57 KKIVNLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTT 116
+ ++L+++A+G NKR++IQ A+F EL K++DPG ++TP KGK +VIMFVGLQGSGKTT
Sbjct: 8 RSAIDLEEMASGLNKRKMIQHAVFKELVKLVDPGVKAWTPTKGKQNVIMFVGLQGSGKTT 67
Query: 117 TCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGV 176
TC+K AYY+Q+KGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGV
Sbjct: 68 TCSKLAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGV 127
Query: 177 ETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQA 236
E FK EN ++IIVDTSGRHKQE +LFEEM QV+ A + PD +++VMD+SIGQA QA+A
Sbjct: 128 EKFKNENFEIIIVDTSGRHKQEDSLFEEMLQVANA-IQPDNIVYVMDASIGQACEAQAKA 186
Query: 237 FKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLL 296
FK V V +VIVTK+DGHAKGGGALSAVAATKSP+IFIGTGEH+D+FE F +PF+S+LL
Sbjct: 187 FKDKVDVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLL 246
Query: 297 GMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPG 356
GMGD G +DK++E + +D L++KL G FTLR MYEQFQNI+KMGP Q+ M+PG
Sbjct: 247 GMGDIEGLIDKVNE-LKLDDNEALIEKLKHGQFTLRDMYEQFQNIMKMGPFSQILGMIPG 305
Query: 357 FSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQV 413
F ++ M KG E+ES A++K+ MT+MDSM ++ELDS++ K+ + RI R+ARGSG
Sbjct: 306 FGTDFMSKGNEQESMARLKKLMTIMDSMNDQELDSTDGAKVFSKQPGRIQRVARGSGVST 365
Query: 414 REVMEMLEEYKRLAKIWSKMKGLK-IPKKGEMSA-LSRNMNA---QHMSKVLPQGMLKQI 468
R+V E+L +Y + A++ KM G+K + K G+MS +S++ A Q M+K++ +L +
Sbjct: 366 RDVQELLTQYTKFAQMVKKMGGIKGLFKGGDMSKNVSQSQMAKLNQQMAKMMDPRVLHHM 425
Query: 469 GGVGGLQNLMKQM--GSTKDMMGMFG 492
GG+ GLQ++M+Q G+ +M GM G
Sbjct: 426 GGMAGLQSMMRQFQQGAAGNMKGMMG 451
>gi|226371618|ref|NP_001139754.1| signal recognition particle 54 kDa protein isoform 2 [Homo sapiens]
gi|332229143|ref|XP_003263751.1| PREDICTED: signal recognition particle 54 kDa protein isoform 2
[Nomascus leucogenys]
gi|335292473|ref|XP_003356739.1| PREDICTED: signal recognition particle 54 kDa protein [Sus scrofa]
gi|338717903|ref|XP_003363720.1| PREDICTED: signal recognition particle 54 kDa protein [Equus
caballus]
gi|397501117|ref|XP_003821241.1| PREDICTED: signal recognition particle 54 kDa protein isoform 2
[Pan paniscus]
gi|402875939|ref|XP_003901748.1| PREDICTED: signal recognition particle 54 kDa protein isoform 2
[Papio anubis]
gi|410048163|ref|XP_003952520.1| PREDICTED: signal recognition particle 54 kDa protein [Pan
troglodytes]
gi|194374727|dbj|BAG62478.1| unnamed protein product [Homo sapiens]
Length = 455
Score = 524 bits (1349), Expect = e-146, Method: Compositional matrix adjust.
Identities = 260/446 (58%), Positives = 345/446 (77%), Gaps = 12/446 (2%)
Query: 57 KKIVNLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTT 116
+ ++L+++A+G NKR++IQ A+F EL K++DPG ++TP KGK +VIMFVGLQGSGKTT
Sbjct: 8 RSAIDLEEMASGLNKRKMIQHAVFKELVKLVDPGVKAWTPTKGKQNVIMFVGLQGSGKTT 67
Query: 117 TCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGV 176
TC+K AYY+Q+KGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGV
Sbjct: 68 TCSKLAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGV 127
Query: 177 ETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQA 236
E FK EN ++IIVDTSGRHKQE +LFEEM QV+ A + PD +++VMD+SIGQA QA+A
Sbjct: 128 EKFKNENFEIIIVDTSGRHKQEDSLFEEMLQVANA-IQPDNIVYVMDASIGQACEAQAKA 186
Query: 237 FKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLL 296
FK V V +VIVTK+DGHAKGGGALSAVAATKSP+IFIGTGEH+D+FE F +PF+S+LL
Sbjct: 187 FKDKVDVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLL 246
Query: 297 GMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPG 356
GMGD G +DK++E + +D L++KL G FTLR MYEQFQNI+KMGP Q+ M+PG
Sbjct: 247 GMGDIEGLIDKVNE-LKLDDNEALIEKLKHGQFTLRDMYEQFQNIMKMGPFSQILGMIPG 305
Query: 357 FSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQV 413
F ++ M KG E+ES A++K+ MT+MDSM ++ELDS++ K+ + RI R+ARGSG
Sbjct: 306 FGTDFMSKGNEQESMARLKKLMTIMDSMNDQELDSTDGAKVFSKQPGRIQRVARGSGVST 365
Query: 414 REVMEMLEEYKRLAKIWSKMKGLK-IPKKGEMSA-LSRNMNA---QHMSKVLPQGMLKQI 468
R+V E+L +Y + A++ KM G+K + K G+MS +S++ A Q M+K++ +L +
Sbjct: 366 RDVQELLTQYTKFAQMVKKMGGIKGLFKGGDMSKNVSQSQMAKLNQQMAKMMDPRVLHHM 425
Query: 469 GGVGGLQNLMKQM--GSTKDMMGMFG 492
GG+ GLQ++M+Q G+ +M GM G
Sbjct: 426 GGMAGLQSMMRQFQQGAAGNMKGMMG 451
>gi|344274152|ref|XP_003408882.1| PREDICTED: signal recognition particle 54 kDa protein-like isoform
2 [Loxodonta africana]
Length = 455
Score = 524 bits (1349), Expect = e-146, Method: Compositional matrix adjust.
Identities = 260/446 (58%), Positives = 345/446 (77%), Gaps = 12/446 (2%)
Query: 57 KKIVNLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTT 116
+ ++L+++A+G NKR++IQ A+F EL K++DPG ++TP KGK +VIMFVGLQGSGKTT
Sbjct: 8 RSAIDLEEMASGLNKRKMIQHAVFKELVKLVDPGVKAWTPTKGKQNVIMFVGLQGSGKTT 67
Query: 117 TCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGV 176
TC+K AYY+Q+KGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGV
Sbjct: 68 TCSKLAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGV 127
Query: 177 ETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQA 236
E FK EN ++IIVDTSGRHKQE +LFEEM QV+ A + PD +++VMD+SIGQA QA+A
Sbjct: 128 EKFKNENFEIIIVDTSGRHKQEDSLFEEMLQVANA-IQPDNIVYVMDASIGQACEAQAKA 186
Query: 237 FKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLL 296
FK V V +VIVTK+DGHAKGGGALSAVAATKSP+IFIGTGEH+D+FE F +PF+S+LL
Sbjct: 187 FKDKVDVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLL 246
Query: 297 GMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPG 356
GMGD G +DK++E + +D L++KL G FTLR MYEQFQNI+KMGP Q+ M+PG
Sbjct: 247 GMGDIEGLIDKVNE-LKLDDNEALIEKLKHGQFTLRDMYEQFQNIMKMGPFSQILGMIPG 305
Query: 357 FSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQV 413
F ++ M KG E+ES A++K+ MT+MDSM ++ELDS++ K+ + RI R+ARGSG
Sbjct: 306 FGTDFMSKGNEQESMARLKKLMTIMDSMNDQELDSTDGAKVFSKQPGRIQRVARGSGVST 365
Query: 414 REVMEMLEEYKRLAKIWSKMKGLK-IPKKGEMSA-LSRNMNA---QHMSKVLPQGMLKQI 468
R+V E+L +Y + A++ KM G+K + K G+MS +S++ A Q M+K++ +L +
Sbjct: 366 RDVQELLTQYTKFAQMVKKMGGIKGLFKGGDMSKNVSQSQMAKLNQQMAKMMDPRVLHHM 425
Query: 469 GGVGGLQNLMKQM--GSTKDMMGMFG 492
GG+ GLQ++M+Q G+ +M GM G
Sbjct: 426 GGMAGLQSMMRQFQQGAAGNMKGMMG 451
>gi|386697309|gb|AFJ22115.1| signal recognition particle protein 54k, partial [Rectijanua sp. n.
AD629]
Length = 444
Score = 523 bits (1348), Expect = e-146, Method: Compositional matrix adjust.
Identities = 259/445 (58%), Positives = 338/445 (75%), Gaps = 10/445 (2%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL+++DV LV++++ N++ +++ D++AAG NKR++I A+F EL ++L
Sbjct: 1 LDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGLNKRKMIMTAVFKELVRLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG + P KGK +VIMFVGLQG GKTTT TK AYY+ KKGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPGVKPWQPIKGKTNVIMFVGLQGIGKTTTVTKMAYYYMKKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGVE F EN +++IVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIASEGVEKFTNENFEIVIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAAT 267
+ +A + P+LV++VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAAT
Sbjct: 181 I-QAAIQPNLVVYVMDASIGQACESQARAFKNKVDVGAIIVTKLDGHAKGGGALSAVAAT 239
Query: 268 KSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEG 327
KSP+IFIGTGEH+DEFE F V+PF+S+LLGMGD G MDK+ E + +D E ++KL G
Sbjct: 240 KSPIIFIGTGEHIDEFEPFKVRPFISKLLGMGDIEGLMDKVSE-LKLDGNEEFIEKLKHG 298
Query: 328 NFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNE 387
FT+R MYEQ NI+KMGP+ Q+ +M+PGF +EL E ES ++IK MT+MDSM++
Sbjct: 299 EFTIRDMYEQLTNIMKMGPLNQILNMIPGFGAELAECASEAESMSRIKHMMTIMDSMSDS 358
Query: 388 ELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLK-IPKKGE 443
ELDS KL + +R++R+ARGSG + REV E+L +Y + A + KM G+K + K G+
Sbjct: 359 ELDSREGAKLFSKQPTRLVRVARGSGVKQREVQELLSQYTKFAAVVKKMGGIKGLFKSGD 418
Query: 444 MSALSRNMNAQHMSKVLPQGMLKQI 468
L++N+N M+K L Q M + I
Sbjct: 419 ---LAKNVNPMQMAK-LNQKMAQMI 439
>gi|386697521|gb|AFJ22221.1| signal recognition particle protein 54k, partial [Knemidokoptes sp.
AD845]
Length = 460
Score = 523 bits (1348), Expect = e-146, Method: Compositional matrix adjust.
Identities = 267/459 (58%), Positives = 351/459 (76%), Gaps = 8/459 (1%)
Query: 13 AIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKR 72
A++ + NATII+++VL+ L EI +AL+++DV LV++++ N++ +++ D++AAG NKR
Sbjct: 2 ALRSLGNATIINQEVLDNLLKEICKALIESDVNIMLVKQLRENVRSVIDFDEMAAGLNKR 61
Query: 73 RIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKP 132
R+I A+F EL K+LDP ++ P KGK +VIMFVGLQG GKTTTCTK AYY+ KKGWK
Sbjct: 62 RMIMMAVFQELVKLLDPEVKAWQPIKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKGWKC 121
Query: 133 ALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTS 192
ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +IIVDTS
Sbjct: 122 ALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFQIIIVDTS 181
Query: 193 GRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMD 252
GRHKQE++LFEEM + +A + P+LV++VMD+SIGQA QA+AFK V VGA+IVTK+D
Sbjct: 182 GRHKQESSLFEEMLAI-QAAIQPNLVVYVMDASIGQACEAQAKAFKNKVDVGAIIVTKLD 240
Query: 253 GHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVV 312
GHAKGGGALSAVAATKSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E+
Sbjct: 241 GHAKGGGALSAVAATKSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDVEGLIDKVNELK 300
Query: 313 PMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQA 372
+ EL++KL G FT+R MYEQ N +KMGP+ Q+ +M+PGF +EL E ES +
Sbjct: 301 LE-ENEELIEKLKHGEFTIRDMYEQITNFMKMGPLNQILNMIPGFGAELAQCTSEAESMS 359
Query: 373 KIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKI 429
++KR MT+MDSM++ ELDS + K+ + +RI+R++RG+G R+V E+L +Y + +
Sbjct: 360 RLKRMMTIMDSMSDTELDSRDGAKIFSKQPTRIIRVSRGAGVTQRDVQELLSQYTKFRAV 419
Query: 430 WSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
KM G+K KG LS+N+N M+K L Q M K I
Sbjct: 420 VKKMGGIKGLFKG--GDLSKNVNPAQMAK-LNQQMAKMI 455
>gi|410962047|ref|XP_003987588.1| PREDICTED: signal recognition particle 54 kDa protein isoform 3
[Felis catus]
Length = 455
Score = 523 bits (1346), Expect = e-145, Method: Compositional matrix adjust.
Identities = 259/446 (58%), Positives = 345/446 (77%), Gaps = 12/446 (2%)
Query: 57 KKIVNLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTT 116
+ ++L+++A+G NKR++IQ A+F EL K++DPG ++TP KGK +VIMFVGLQGSGKTT
Sbjct: 8 RSAIDLEEMASGLNKRKMIQHAVFKELVKLVDPGVKAWTPTKGKQNVIMFVGLQGSGKTT 67
Query: 117 TCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGV 176
TC+K AYY+Q+KGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGV
Sbjct: 68 TCSKLAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGV 127
Query: 177 ETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQA 236
+ FK EN ++IIVDTSGRHKQE +LFEEM QV+ A + PD +++VMD+SIGQA QA+A
Sbjct: 128 DKFKNENFEIIIVDTSGRHKQEDSLFEEMLQVANA-IQPDNIVYVMDASIGQACEAQAKA 186
Query: 237 FKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLL 296
FK V V +VIVTK+DGHAKGGGALSAVAATKSP+IFIGTGEH+D+FE F +PF+S+LL
Sbjct: 187 FKDKVDVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLL 246
Query: 297 GMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPG 356
GMGD G +DK++E + +D L++KL G FTLR MYEQFQNI+KMGP Q+ M+PG
Sbjct: 247 GMGDIEGLIDKVNE-LKLDDNEALIEKLKHGQFTLRDMYEQFQNIMKMGPFSQILGMIPG 305
Query: 357 FSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQV 413
F ++ M KG E+ES A++K+ MT+MDSM ++ELDS++ K+ + RI R+ARGSG
Sbjct: 306 FGTDFMSKGNEQESMARLKKLMTIMDSMNDQELDSTDGAKVFSKQPGRIQRVARGSGVST 365
Query: 414 REVMEMLEEYKRLAKIWSKMKGLK-IPKKGEMSA-LSRNMNA---QHMSKVLPQGMLKQI 468
R+V E+L +Y + A++ KM G+K + K G+MS +S++ A Q M+K++ +L +
Sbjct: 366 RDVQELLTQYTKFAQMVKKMGGIKGLFKGGDMSKNVSQSQMAKLNQQMAKMMDPRVLHHM 425
Query: 469 GGVGGLQNLMKQM--GSTKDMMGMFG 492
GG+ GLQ++M+Q G+ +M GM G
Sbjct: 426 GGMAGLQSMMRQFQQGAAGNMKGMMG 451
>gi|386697257|gb|AFJ22089.1| signal recognition particle protein 54k, partial [Hypoderatidae
gen. sp. AD887]
Length = 463
Score = 523 bits (1346), Expect = e-145, Method: Compositional matrix adjust.
Identities = 266/463 (57%), Positives = 352/463 (76%), Gaps = 10/463 (2%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I+ A++ + NATII+++VL+ L EI AL+++DV LV+ ++ N++ +++ D++AAG
Sbjct: 3 ITTALRSLGNATIINQEVLDNLLKEICTALIESDVNIMLVKRLRENVRSVIDFDEMAAGL 62
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
NKRR+I A+F EL ++LDPG + P KG+ +VIMFVGLQG GKTTTCTK AYY+ +KG
Sbjct: 63 NKRRMIMMAVFKELGRLLDPGVKVWQPVKGRTNVIMFVGLQGIGKTTTCTKMAYYYMRKG 122
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
WK ALVCADTFRAGAFDQLKQNATKA+IPF+GSYTESDPV IA EGVE F EN ++IIV
Sbjct: 123 WKCALVCADTFRAGAFDQLKQNATKARIPFFGSYTESDPVVIASEGVEKFSNENFEIIIV 182
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE++LFEEM + +A + P+LV++VMD+SIGQA QA+AFK V VGA+IVT
Sbjct: 183 DTSGRHKQESSLFEEMLAI-QAAIQPNLVVYVMDASIGQACEAQAKAFKSKVDVGAIIVT 241
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DGHAKGGGALSAVAAT SP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++
Sbjct: 242 KLDGHAKGGGALSAVAATNSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVN 301
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E+ + EL++KL G FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E E
Sbjct: 302 ELKLE-ENEELIEKLKHGEFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAE 360
Query: 370 SQAKIKRYMTMMDSMTNEELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRL 426
S +++KR MT+MDSM++ ELDS KL + +RI+R+ARG+G +EV E+L +Y +
Sbjct: 361 SMSRLKRMMTIMDSMSDSELDSREGAKLFSKQPTRIVRVARGAGVFQKEVQELLSQYTKF 420
Query: 427 AKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
A + KM G+K + K G+ L++N+N M+K L Q M K I
Sbjct: 421 AAVVKKMGGIKGLFKSGD---LTKNVNPAQMAK-LNQQMAKMI 459
>gi|363734109|ref|XP_003641340.1| PREDICTED: signal recognition particle 54 kDa protein isoform 1
[Gallus gallus]
Length = 455
Score = 522 bits (1344), Expect = e-145, Method: Compositional matrix adjust.
Identities = 259/455 (56%), Positives = 349/455 (76%), Gaps = 19/455 (4%)
Query: 52 MQTNIKK-IVNLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQ 110
+Q ++K+ ++L+++A+G NKR++IQ A+F EL K++DPG ++TP KGK ++IMFVGLQ
Sbjct: 2 LQLSMKRSAIDLEEMASGLNKRKMIQHAVFKELVKLVDPGVKAWTPTKGKQNIIMFVGLQ 61
Query: 111 GSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVR 170
GSGKTTTC+K AY++Q+KGWK L+CADT+RAGAFDQLKQNATKA+IPFYGSYTE DPV
Sbjct: 62 GSGKTTTCSKLAYFYQRKGWKTCLICADTYRAGAFDQLKQNATKARIPFYGSYTEMDPVI 121
Query: 171 IAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAA 230
IA EGVE FK EN ++IIVDTSGRHKQE +LFEEM QV+ A + PD +++VMD+SIGQA
Sbjct: 122 IASEGVEKFKNENFEIIIVDTSGRHKQEDSLFEEMLQVANA-IQPDNIVYVMDASIGQAC 180
Query: 231 FDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKP 290
QA+AFK V V +VIVTK+DGHAKGGGALSAVAATKSP+IFIGTGEH+D+FE F +P
Sbjct: 181 EAQAKAFKDKVDVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQP 240
Query: 291 FVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQV 350
F+S+LLGMGD G +DK++E + +D L++KL G FTLR MYEQFQNI+KMGP Q+
Sbjct: 241 FISKLLGMGDIEGLIDKVNE-LKLDDNEALIEKLKHGQFTLRDMYEQFQNIMKMGPFSQI 299
Query: 351 FSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIAR 407
M+PGF ++ M KG E+ES A++K+ MT+MDSM ++ELDS++ K+ + RI R+AR
Sbjct: 300 LGMIPGFGTDFMSKGNEQESMARLKKLMTIMDSMNDQELDSTDGAKVFSKQPGRIQRVAR 359
Query: 408 GSGRQVREVMEMLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNA-------QHMSKV 459
GSG R+V E+L +Y + A++ KM G+K + K G+M S+N+N Q M+K+
Sbjct: 360 GSGVSTRDVQELLTQYTKFAQMVKKMGGIKGLFKGGDM---SKNVNPSQLAKLNQQMAKM 416
Query: 460 LPQGMLKQIGGVGGLQNLMKQM--GSTKDMMGMFG 492
+ +L +GG+ GLQ++M+Q G+ +M GM G
Sbjct: 417 MDPRVLHHMGGMAGLQSMMRQFQQGAAGNMKGMMG 451
>gi|386697527|gb|AFJ22224.1| signal recognition particle protein 54k, partial [Passeroptes sp.
AD798]
Length = 444
Score = 521 bits (1343), Expect = e-145, Method: Compositional matrix adjust.
Identities = 260/444 (58%), Positives = 333/444 (75%), Gaps = 8/444 (1%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI +AL+++DV KLV+ ++ N++ I++ D++AAG NKRR+I A+F EL K+L
Sbjct: 1 LDNLLKEICKALIESDVNIKLVKNLRENVRSIIDFDEMAAGLNKRRMIMMAVFQELVKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DP + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPEVKPWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +IIVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFQIIIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAAT 267
+ +A + P+L+++VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAAT
Sbjct: 181 I-QAAIQPNLIVYVMDASIGQACESQARAFKDKVDVGAIIVTKLDGHAKGGGALSAVAAT 239
Query: 268 KSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEG 327
KSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK+ E + +D+ EL++KL G
Sbjct: 240 KSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVSE-LKLDENDELIEKLKHG 298
Query: 328 NFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNE 387
FT+R MYEQ N +KMGPI Q+ SM+PGF +EL E ES +++KR MT+MDSM++
Sbjct: 299 EFTIRDMYEQITNFMKMGPINQILSMIPGFGAELAQCTSEAESMSRLKRMMTIMDSMSDT 358
Query: 388 ELDSSN-PKLM--NDSRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLKIPKKGEM 444
ELD+ + KL R R++RG+G R+V E+L +Y + + +M G+K +G
Sbjct: 359 ELDARDGTKLFYKQPKRFFRVSRGAGVTPRDVQELLSQYNKFRAVVKRMGGIKGLFRG-- 416
Query: 445 SALSRNMNAQHMSKVLPQGMLKQI 468
L++N+N M K L Q M K I
Sbjct: 417 GDLNKNVNPTQMLK-LNQQMAKMI 439
>gi|386697531|gb|AFJ22226.1| signal recognition particle protein 54k, partial [Dermationidae sp.
AD695]
Length = 444
Score = 520 bits (1340), Expect = e-145, Method: Compositional matrix adjust.
Identities = 260/444 (58%), Positives = 333/444 (75%), Gaps = 8/444 (1%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI +AL+++DV KLV+ ++ N++ I++ D++AAG NKRR+I A+F EL K+L
Sbjct: 1 LDNLLKEICKALIESDVNIKLVKNLRENVRSIIDFDEMAAGLNKRRMIMMAVFQELVKLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DP + P KGK +VIMFVGLQG GKTTTCTK AYY+ KKGWK ALVCADTFRAGAFDQ
Sbjct: 61 DPEVKPWQPVKGKTNVIMFVGLQGIGKTTTCTKMAYYYMKKGWKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPFYGSYTESDPV IA EGVE F KEN +IIVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFYGSYTESDPVVIASEGVEKFTKENFQIIIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAAT 267
+ +A + P+L+++VMD+SIGQA QA+AFK V VGA+IVTK+DGHAKGGGALSAVAAT
Sbjct: 181 I-QAAIQPNLIVYVMDASIGQACESQARAFKDKVDVGAIIVTKLDGHAKGGGALSAVAAT 239
Query: 268 KSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEG 327
KSP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK+ E + +D+ EL++KL G
Sbjct: 240 KSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVSE-LKLDENDELIEKLKHG 298
Query: 328 NFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNE 387
FT+R MYEQ N +KMGPI Q+ SM+PGF +EL E ES +++KR MT+MDSM++
Sbjct: 299 EFTIRDMYEQITNFMKMGPINQILSMIPGFGAELAQCTSEAESMSRLKRMMTIMDSMSDT 358
Query: 388 ELDSSN-PKLM--NDSRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLKIPKKGEM 444
ELD+ + KL R R++RG+G R+V E+L +Y + + +M G+K +G
Sbjct: 359 ELDARDGTKLFYKQPKRFFRVSRGAGVTPRDVQELLGQYNKFRAVVKRMGGIKGLFRG-- 416
Query: 445 SALSRNMNAQHMSKVLPQGMLKQI 468
L++N+N M K L Q M K I
Sbjct: 417 GDLNKNVNPTQMLK-LNQQMAKMI 439
>gi|427792757|gb|JAA61830.1| Putative signal recognition particle subunit srp54, partial
[Rhipicephalus pulchellus]
Length = 474
Score = 520 bits (1338), Expect = e-144, Method: Compositional matrix adjust.
Identities = 264/440 (60%), Positives = 332/440 (75%), Gaps = 21/440 (4%)
Query: 67 AGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQ 126
AG NKRR+IQ A+F EL +++DPG ++ P KGK +VIMFVGLQGSGKTTTCTK AY++
Sbjct: 38 AGLNKRRMIQSAVFKELIRLVDPGVKAWQPTKGKNNVIMFVGLQGSGKTTTCTKLAYHYL 97
Query: 127 KKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDL 186
KKGWK LVCADTFRAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGVE FK E ++
Sbjct: 98 KKGWKTCLVCADTFRAGAFDQLKQNATKARIPFYGSYTEVDPVVIAQEGVEKFKNEGFEI 157
Query: 187 IIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAV 246
I+VDTSGRHKQE +LFEEM QVS AT PD +IFVMD+SIGQA QA+AFK+ V VGAV
Sbjct: 158 IVVDTSGRHKQEDSLFEEMLQVSNAT-KPDNIIFVMDASIGQACESQARAFKEKVDVGAV 216
Query: 247 IVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMD 306
IVTK+DGHAKGGGALSAVAAT SP+IFIGTGEH+D+FE F VKPF+S+LLGMGD G +D
Sbjct: 217 IVTKLDGHAKGGGALSAVAATHSPIIFIGTGEHIDDFEPFKVKPFISKLLGMGDIEGLID 276
Query: 307 KIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGR 366
K++E + +D EL++KL G FTLR MYEQFQNI+KMGP Q+ M+PGFSS+ M KG
Sbjct: 277 KVNE-LKLDDNEELIEKLKHGEFTLRDMYEQFQNIMKMGPFSQIMGMIPGFSSDFMTKGN 335
Query: 367 EKESQAKIKRYMTMMDSMTNEELDS-SNPKLMN--DSRIMRIARGSGRQVREVMEMLEEY 423
E+ES ++K+ MT+MDSM ++ELD KL + R+ R+ARG+G REV E+L +Y
Sbjct: 336 EQESMGRLKKLMTIMDSMNDQELDHREGAKLFSRQTGRVTRVARGAGVTSREVQELLAQY 395
Query: 424 KRLAKIWSKMKGLK-IPKKGEMSALSRNMNA-------QHMSKVLPQGMLKQIGGVGGLQ 475
+ A + KM G+K + K G+M ++N+N Q M+K++ +L Q+GG GLQ
Sbjct: 396 TKFAAMVKKMGGIKGLFKGGDM---AKNVNQAQMNKLNQQMAKMMDPRVLHQMGGFSGLQ 452
Query: 476 NLMKQM-----GSTKDMMGM 490
N+M+Q+ G+ ++M M
Sbjct: 453 NMMRQLQGAASGNVNNLMNM 472
>gi|386697251|gb|AFJ22086.1| signal recognition particle protein 54k, partial [Neottialges
vitzthumi]
Length = 433
Score = 519 bits (1336), Expect = e-144, Method: Compositional matrix adjust.
Identities = 250/436 (57%), Positives = 335/436 (76%), Gaps = 9/436 (2%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L+ L EI AL+++DV LV++++ N++ +++ D++AAG NKRR+I A+F EL ++L
Sbjct: 1 LDSLLKEICTALIESDVNIMLVKQLRENVRSVIDFDEMAAGLNKRRMIMMAVFKELVRLL 60
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQ 147
DPG ++ P KG+ +VIMFVGLQG GKTTTCTK AYY+ +KG+K ALVCADTFRAGAFDQ
Sbjct: 61 DPGVKAWQPVKGRTNVIMFVGLQGIGKTTTCTKMAYYYMRKGFKCALVCADTFRAGAFDQ 120
Query: 148 LKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQ 207
LKQNATKA+IPF+GSYTESDPV IA EGVE F EN +++IVDTSGRHKQE++LFEEM
Sbjct: 121 LKQNATKARIPFFGSYTESDPVVIASEGVEKFTNENFEIVIVDTSGRHKQESSLFEEMLA 180
Query: 208 VSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAAT 267
+ +A + P+LV++VMD+SIGQA QA+AFK V VGA+I+TK+DGHAKGGGALSAVAA
Sbjct: 181 I-QAAIQPNLVVYVMDASIGQACEAQAKAFKSKVDVGAIIITKLDGHAKGGGALSAVAAX 239
Query: 268 KSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEG 327
SP+IFIGTGEH+DEFE F VKPF+S+LLGMGD G +DK++E + ++ EL++KL G
Sbjct: 240 NSPIIFIGTGEHIDEFEQFKVKPFISKLLGMGDIEGLIDKVNE-LKLEDNEELIEKLKHG 298
Query: 328 NFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNE 387
FT+R MYEQ NI+KMGP Q+ +M+PGF +EL E ES +++KR MT+MDSM++
Sbjct: 299 EFTIRDMYEQLTNIMKMGPFNQILNMIPGFGAELAKCASEAESMSRLKRMMTIMDSMSDS 358
Query: 388 ELDS-SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLK-IPKKGE 443
ELDS KL + +RI+R+ARG+G REV E+L +Y + A + KM G+K + K G+
Sbjct: 359 ELDSREGAKLFSKQPTRIVRVARGAGVMQREVQELLSQYTKFAAVVKKMGGIKGLFKTGD 418
Query: 444 MSALSRNMNAQHMSKV 459
L++N+N M+K+
Sbjct: 419 ---LTKNVNPAQMAKL 431
>gi|313218053|emb|CBY41387.1| unnamed protein product [Oikopleura dioica]
Length = 502
Score = 519 bits (1336), Expect = e-144, Method: Compositional matrix adjust.
Identities = 257/491 (52%), Positives = 354/491 (72%), Gaps = 25/491 (5%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG ++ A++ + N+ +I+E VL +CL ++ ALL+ADV KLV+++ +KK +
Sbjct: 1 MVLADLGRKLTTALRSLGNSPVINEDVLKKCLKDVQSALLEADVNIKLVKQLTDGVKKQI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+LD++ G NKRR+IQ A++ ELC++ DPG + P KG+ SVIMFVGLQGSGKTT+C K
Sbjct: 61 DLDNIGTGLNKRRVIQTAVYKELCRICDPGVKPWKPTKGRSSVIMFVGLQGSGKTTSCIK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++QKKGWK A+VCADTFRAGA+DQ+KQN TKA+IPFYGS TE DP IA +GVETFK
Sbjct: 121 LAYHYQKKGWKCAVVCADTFRAGAYDQVKQNCTKARIPFYGSLTEPDPAVIAYDGVETFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KE D+IIVDTSGRHKQE +LFEEM QV+ A V PD +IFVMD+SIGQA QA+AFK
Sbjct: 181 KEKFDIIIVDTSGRHKQEDSLFEEMLQVNNA-VEPDNIIFVMDASIGQACESQAKAFKDQ 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V VG+VI+TK+D HAKGGGALSA+AAT+SP++FIGTGEH+DE E F+ F+ +LL MGD
Sbjct: 240 VDVGSVIITKLDSHAKGGGALSAIAATQSPIVFIGTGEHIDELEPFETTKFIRKLLNMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G +DK+++ + ++ +L + L +G FTLR MYEQFQNILKMGP Q+ M+PGF ++
Sbjct: 300 IEGLIDKVNQ-LKLEDNEDLKKNLQKGRFTLRDMYEQFQNILKMGPFNQIMGMIPGF-ND 357
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEML 420
M KG E++ +DS +L +N R+ R+ARGSG +EV E++
Sbjct: 358 FMNKGHEQDE----------LDSPDGHKLFKNNDD--GSRRLRRVARGSGSSPKEVFELI 405
Query: 421 EEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQ-------HMSKVLPQGMLKQIGGVGG 473
++Y++ A++ KM G+ + K G+ LS+NMN Q HM+K++ +L+Q+GG+ G
Sbjct: 406 DQYQKFAQMVKKMGGMGLFKNGD---LSKNMNMQQMNQINGHMAKMMDPRVLQQMGGMDG 462
Query: 474 LQNLMKQMGST 484
L+ +M+Q +
Sbjct: 463 LKKMMQQFNQS 473
>gi|281206952|gb|EFA81136.1| signal recognition particle 54 kDa subunit [Polysphondylium
pallidum PN500]
Length = 504
Score = 515 bits (1326), Expect = e-143, Method: Compositional matrix adjust.
Identities = 262/490 (53%), Positives = 357/490 (72%), Gaps = 11/490 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG IS A+ MSN+TII+E+ ++ L E+ AL +ADV KL+ +M+ NIK+ +
Sbjct: 1 MVLADLGNQISSALANMSNSTIINEETIDTLLKEVGNALSRADVSLKLIIQMRKNIKEQL 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
LD +AAG NKRRII++ +F+EL K+LDPG + P KGK ++IMFVGLQG+GKTT+ TK
Sbjct: 61 KLDAMAAGLNKRRIIKKVVFDELIKLLDPGVAPWKPTKGKSNIIMFVGLQGAGKTTSVTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++++KGW A+VCADTFRAGAFDQLK NATKAKIPFYGS T+ DPV +A +GV+ FK
Sbjct: 121 LASFYKRKGWATAMVCADTFRAGAFDQLKHNATKAKIPFYGSDTDRDPVAVAKKGVDIFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
K+ ++IIVDTSGRHKQE LF+EM+++ E V PD VIFVMDSSIGQAAFDQA AFK S
Sbjct: 181 KDGAEIIIVDTSGRHKQEEELFKEMKEI-ETVVKPDNVIFVMDSSIGQAAFDQATAFKNS 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
VSVG+VI+TKMDG++KGGGA+SAVAATKSP+IFIGTGEH+ + ++FD FVS+LLGMGD
Sbjct: 240 VSVGSVIITKMDGNSKGGGAISAVAATKSPIIFIGTGEHIPDLDLFDASSFVSKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G M+ I +VVP D + L++++ G FT R M +QF IL +GPI + M+PG S+
Sbjct: 300 VKGMMNMIADVVPKDTKA--LEEIASGKFTFRNMKQQFLQILNLGPIDKFVQMMPGMSN- 356
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEML 420
+P+ + K+K Y+ ++DSM++ ELD + + RI+RIARGSGR REV E++
Sbjct: 357 -IPQLQGDAGNLKLKAYINILDSMSDGELDGKHQ--ITPQRILRIARGSGRHPREVAELV 413
Query: 421 EEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQIGGVGGLQNLMKQ 480
E+ K K++SK GL+ + N Q ++ ++P M+K++ G+GGLQ++
Sbjct: 414 EQKKAFEKMFSKGPGLQNLANMAKGGVPNQRNLQQLASMVPPEMMKKM-GMGGLQSM--- 469
Query: 481 MGSTKDMMGM 490
+ S K+M G+
Sbjct: 470 LASVKNMKGL 479
>gi|242055585|ref|XP_002456938.1| hypothetical protein SORBIDRAFT_03g045950 [Sorghum bicolor]
gi|241928913|gb|EES02058.1| hypothetical protein SORBIDRAFT_03g045950 [Sorghum bicolor]
Length = 487
Score = 514 bits (1323), Expect = e-143, Method: Compositional matrix adjust.
Identities = 285/487 (58%), Positives = 358/487 (73%), Gaps = 46/487 (9%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNI-KKI 59
MVLAQLG S+ A+ QM+ +T++D+KV+ +CLN+++RALLQADV+F+ VR +Q +I +
Sbjct: 1 MVLAQLGESLVGALAQMAKSTVVDDKVVVDCLNDVSRALLQADVRFETVRAVQASIGSAV 60
Query: 60 VNLDDLAAGHNKRRIIQQAIFNELCKMLDP------GKPS--FTPKKG-KP-SVIMFVGL 109
VNL LAAG ++RR I+ A+ +EL +MLDP GKP F P+KG KP SV+MFVGL
Sbjct: 61 VNLQSLAAGTDRRRAIKHAVVDELRRMLDPAAGGGTGKPPPFFVPRKGRKPASVVMFVGL 120
Query: 110 QGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPV 169
QGSGKTTTC KYA YH++ G+ PALVCADTFRAGA DQL+QNA KA IPFYGSYTESDPV
Sbjct: 121 QGSGKTTTCVKYADYHRRTGFSPALVCADTFRAGALDQLRQNAAKAGIPFYGSYTESDPV 180
Query: 170 RIAVEGVETFKK-------ENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVM 222
R+AVEGV+ F+ E CDLI+VDTSGRH QEAAL EEMRQ++EAT PDLV+ VM
Sbjct: 181 RVAVEGVDRFRNADQAAAAEGCDLIVVDTSGRHSQEAALLEEMRQLAEAT-RPDLVVLVM 239
Query: 223 DSSIGQAAFDQAQAFKQSVSVGAVI-VTKMDGHAK-GGGALSAVAATKSPVIFIGTGEHM 280
D++IGQAAFDQA AFKQSV VGAVI VTKMDGHAK GGGALSAVAATKSPVIFIGTGEH+
Sbjct: 240 DATIGQAAFDQALAFKQSVEVGAVIVVTKMDGHAKGGGGALSAVAATKSPVIFIGTGEHI 299
Query: 281 DEFEVFDVKPFVS-RLLGMGDWSGFMDKIHE-----VVPMDQ-----QPELLQKLS---- 325
+ E FD + FVS RLLGMGD GFMDKI + + DQ + +LL +L+
Sbjct: 300 ADLEAFDARSFVSRRLLGMGDLPGFMDKIEDAMTTMTMAADQGQEGLEQQLLHELTTVKG 359
Query: 326 -EGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES--QAKIKRYMTMMD 382
FTLR +Y F+ + +MGP+G + S LP + L KG+++E Q KIKRYMT+MD
Sbjct: 360 ASFTFTLRALYSLFRLVQRMGPLGHLVSFLP--AGLLGDKGKQEEEGQQDKIKRYMTIMD 417
Query: 383 SMTNEELDSSNP-KLM----NDSRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLK 437
SM+ ELD ++P KLM SRI R+ARGSGR V +V+E+L+E+KR+A++ S++
Sbjct: 418 SMSAAELDGADPMKLMMTKQQQSRINRVARGSGRPVSQVVELLQEHKRMAEMLSELAPAH 477
Query: 438 IPKKGEM 444
P G +
Sbjct: 478 KPDVGPL 484
>gi|358342721|dbj|GAA50175.1| signal recognition particle subunit SRP54 [Clonorchis sinensis]
Length = 518
Score = 513 bits (1321), Expect = e-143, Method: Compositional matrix adjust.
Identities = 273/523 (52%), Positives = 370/523 (70%), Gaps = 38/523 (7%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LG I+ A++ + NATII+E VLN L EI AL+++DV +LV++++ N++ ++
Sbjct: 1 MVLAELGRKITSALRSLGNATIINEDVLNGLLKEICTALIESDVNIRLVKQLRENVRAVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ D++AAG NKR+IIQ A+F +L ++DP ++ P KG +VIM VGLQGSGKTTT TK
Sbjct: 61 DFDEMAAGLNKRKIIQSAVFEQLVHLIDPQVKAWQPTKGTSNVIMLVGLQGSGKTTTATK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY+Q+K WK ++CADT+RAGAFDQLKQNATKA+IPFYGSYTE+DPV IA +GV+ F+
Sbjct: 121 LAYYYQRKNWKTCMICADTYRAGAFDQLKQNATKARIPFYGSYTETDPVVIARDGVQKFE 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
E+ ++IIVDTSGRHKQE +LFEEM QVS A + PD VI+VMD+SIGQA QA AFK
Sbjct: 181 DESFEIIIVDTSGRHKQEDSLFEEMLQVSNA-IEPDQVIYVMDASIGQACEAQASAFKSK 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V V +VIVTK+DGHAKGGGALSAVAAT SP++FIGTGEH+D+FE F VKPFV +LLG+GD
Sbjct: 240 VDVSSVIVTKLDGHAKGGGALSAVAATHSPIVFIGTGEHIDDFEPFRVKPFVQKLLGLGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G ++++ E+ +D+ EL++KL +G FTLR MYEQFQNILK+G QV S +PG +
Sbjct: 300 LEGLVERVTEL-KLDENEELVKKLKQGVFTLRNMYEQFQNILKIGSFSQVLSAIPGLGQD 358
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMNDS--RIMRIARGSGRQVREVM 417
L+ ++ES ++KR MT+MDSM + ELDS +L N R +R+ARG+G EV
Sbjct: 359 LL--ANDQESHKRLKRLMTIMDSMNDYELDSDEGARLFNRQPGRTLRVARGAGVSQAEVK 416
Query: 418 EMLEEYKRLAKIWSKMKGLKI-----PKK---------------GEMSALSRNMNA---- 453
+L ++ + + KM G+K P+ EM+A SR+++A
Sbjct: 417 LLLTQHTKFYMVVKKMGGIKGLFQTGPRAGASGPSGPGGNPPSLSEMAAASRSVSAGQMA 476
Query: 454 ---QHMSKVLPQGMLKQIGGVGGLQNLMKQMGSTKDMMGMFGG 493
Q M+KVL +L Q+GG+ GLQN+M+Q+ + G FGG
Sbjct: 477 KLNQSMAKVLDPRILHQMGGMAGLQNMMRQLQTG----GAFGG 515
>gi|257205636|emb|CAX82469.1| Signal recognition particle 54 kDa protein [Schistosoma japonicum]
Length = 532
Score = 509 bits (1312), Expect = e-141, Method: Compositional matrix adjust.
Identities = 267/519 (51%), Positives = 364/519 (70%), Gaps = 42/519 (8%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LG I+ A++ + NATII+E VLN L EI AL++ADV +LV++++ N++ ++
Sbjct: 1 MVLAELGRKITNALRSLGNATIINEDVLNSLLKEICTALIEADVNIRLVKQLRENVRAVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ D++AAG NKR+IIQ A+F EL ++DP ++ P +G P+VIM VGLQG GKTTT TK
Sbjct: 61 DFDEMAAGLNKRKIIQSAVFKELVHLVDPQVKAWQPARGSPNVIMLVGLQGCGKTTTATK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++Q+KGWK ++CADTFRAGAFDQLKQNATKA+IPFYGSYTE+DPV IA +GV+ F
Sbjct: 121 LAYFYQRKGWKTCMICADTFRAGAFDQLKQNATKARIPFYGSYTETDPVVIARDGVQKFV 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
+E ++IIVDTSGRH+QE +LFEEM QVS A + PD VI+V+D+SIGQA QA AFK
Sbjct: 181 EEKFEIIIVDTSGRHRQEDSLFEEMLQVSNA-IEPDHVIYVLDASIGQACEAQASAFKAK 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V V +VIVTK+DGHAKGGGALSAVAAT SP+ FIGTGEH+++FE F V+PFV +LLG+GD
Sbjct: 240 VDVSSVIVTKLDGHAKGGGALSAVAATHSPITFIGTGEHVEDFEQFRVQPFVQKLLGLGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G ++++ E + +D+ EL++KL +G FTLR MYEQFQNILK+G QV S +PG +
Sbjct: 300 LEGLVERVTE-LKLDENEELVKKLKQGVFTLRNMYEQFQNILKIGSFSQVLSAIPGLGQD 358
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMNDS--RIMRIARGSGRQVREVM 417
L+ ++ES ++KR MT+MDSM + ELDS +L N R +R+ARG+G EV
Sbjct: 359 LL--ANDQESHRRLKRLMTIMDSMNDYELDSDEGGRLFNRQPGRTLRVARGAGVSQAEVK 416
Query: 418 EMLEEYKRLAKIWSKMKGLK----------------------------IPKKGEMSALSR 449
+L ++ + + KM G+K P EM+A SR
Sbjct: 417 LLLTQHSKFYMVVKKMGGIKGLFQTGPKGGAMGGVAGGAGSGAGGSGNTPSLAEMAAASR 476
Query: 450 NMNA-------QHMSKVLPQGMLKQIGGVGGLQNLMKQM 481
+++A Q M+KVL +L+Q+GG+ GLQN+M+Q+
Sbjct: 477 SVSAGQMAKLNQSMAKVLDPRILQQMGGMAGLQNMMRQL 515
>gi|256082003|ref|XP_002577253.1| signal recognition particle 54 kD protein [Schistosoma mansoni]
gi|353233394|emb|CCD80749.1| putative signal recognition particle 54 kD protein [Schistosoma
mansoni]
Length = 538
Score = 505 bits (1301), Expect = e-140, Method: Compositional matrix adjust.
Identities = 266/524 (50%), Positives = 363/524 (69%), Gaps = 47/524 (8%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LG I+ A++ + NATII+E VLN L EI AL++ADV +LV++++ N++ ++
Sbjct: 1 MVLAELGRKITNALRSLGNATIINEDVLNSLLKEICTALIEADVNIRLVKQLRENVRAVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ D++AAG NKR+IIQ A+F EL ++DP ++ P +G +VIM VGLQG GKTTT TK
Sbjct: 61 DFDEMAAGLNKRKIIQSAVFKELVHLVDPQVKAWQPARGSSNVIMLVGLQGCGKTTTATK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++Q+KGWK ++CADTFRAGAFDQLKQNATKA+IPFYGSYTE+DPV IA +GV+ F
Sbjct: 121 LAYFYQRKGWKTCMICADTFRAGAFDQLKQNATKARIPFYGSYTETDPVVIARDGVQKFV 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
+E ++IIVDTSGRH+QE +LFEEM QVS A + PD VI+V+D+SIGQA QA AFK
Sbjct: 181 EEKFEIIIVDTSGRHRQEDSLFEEMLQVSNA-IEPDHVIYVLDASIGQACEAQASAFKAK 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V V +VIVTK+DGHAKGGGALSAVAAT SP+ FIGTGEH+++FE F V+PFV +LLG+GD
Sbjct: 240 VDVSSVIVTKLDGHAKGGGALSAVAATHSPITFIGTGEHVEDFEQFRVQPFVQKLLGLGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G ++++ E + +D+ EL++KL +G FTLR MYEQFQNILK+G QV S +PG +
Sbjct: 300 LEGLVERVTE-LKLDENEELVKKLKQGVFTLRNMYEQFQNILKIGSFSQVLSAIPGLGQD 358
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMNDS--RIMRIARGSGRQVREVM 417
L+ ++ES ++KR MT+MDSM + ELDS +L N R +R+ARG+G EV
Sbjct: 359 LL--ANDQESHRRLKRLMTIMDSMNDYELDSDEGGRLFNRQPGRTLRVARGAGVSQAEVK 416
Query: 418 EMLEEYKRLAKIWSKMKGLK---------------------------------IPKKGEM 444
+L ++ + + KM G+K P EM
Sbjct: 417 LLLTQHNKFYMVVKKMGGIKGLFQTGSKSGAMGGIGGGPGGVGSGGGAGGSGNTPSLAEM 476
Query: 445 SALSRNMNA-------QHMSKVLPQGMLKQIGGVGGLQNLMKQM 481
+A SR+++A Q M+KVL +L+Q+GG+ GLQN+M+Q+
Sbjct: 477 AAASRSVSAGQMAKLNQSMAKVLDPRILQQMGGMAGLQNMMRQL 520
>gi|389585354|dbj|GAB68085.1| signal recognition particle 54 kDa protein [Plasmodium cynomolgi
strain B]
Length = 485
Score = 504 bits (1299), Expect = e-140, Method: Compositional matrix adjust.
Identities = 246/491 (50%), Positives = 352/491 (71%), Gaps = 21/491 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL +LG ++ A+Q++ + D+ + ECL E+ RAL+ AD+ ++++++NIKK +
Sbjct: 1 MVLTELGTQLTCALQKLQASAAADDSAIEECLKEVIRALILADINISYLKDIKSNIKKNI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ G+NK+R++QQ + EL +L+ K S+ PKKG +VI+FVGLQGS KTTTCTK
Sbjct: 61 EKNIDLYGNNKKRLVQQYVVEELINLLEGKKESYVPKKGSRNVILFVGLQGSEKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
+A+Y+QKKG+K ALVCADTFRAGAFDQLKQNA K KIPFYGSY+E DPV+IA +GV F
Sbjct: 121 FAHYYQKKGFKTALVCADTFRAGAFDQLKQNAAKVKIPFYGSYSEVDPVKIASDGVNAFL 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KE DLIIVD+SGRHKQE+ LFEEM+QV E+++ P+ ++FV+DS IGQ+
Sbjct: 181 KEKYDLIIVDSSGRHKQESELFEEMKQV-ESSIKPEEIVFVIDSHIGQS----------- 228
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
++I+TK+DGHAKGGGALSAVA+T P+ FIGTGEH+++FE F+ K FVSRLLG+GD
Sbjct: 229 ----SIIITKIDGHAKGGGALSAVASTGCPITFIGTGEHINDFEKFEAKSFVSRLLGLGD 284
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
+G + + EV+ +++QP+L+ +LS+G F LR MY+QFQN+ KMG + +V SM+PGF +
Sbjct: 285 INGLVSTLKEVIDIEKQPQLINRLSKGKFVLRDMYDQFQNVFKMGSLSKVMSMIPGFGNN 344
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEML 420
L+ KG EKE KIK++M +MDSMTNEELD P +NDSR +RI +GSG +++++ E+L
Sbjct: 345 LISKGTEKEGIEKIKKFMVIMDSMTNEELDCVKP--LNDSRCLRICKGSGTRLQDIRELL 402
Query: 421 EEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNA--QHMSKVLPQGMLKQIGGVGGLQNLM 478
E++K L + SKM L + ++ + +L RN M+ ++ ML Q+GG + N++
Sbjct: 403 EQFKFLKNMVSKMGKLGL-RENNLGSLMRNQKQFLSKMNNMIDPSMLGQMGGANNMVNIL 461
Query: 479 KQMGSTKDMMG 489
K+ D+ G
Sbjct: 462 KEFTKMDDLGG 472
>gi|323454201|gb|EGB10071.1| hypothetical protein AURANDRAFT_36724 [Aureococcus anophagefferens]
Length = 497
Score = 503 bits (1294), Expect = e-139, Method: Compositional matrix adjust.
Identities = 251/499 (50%), Positives = 358/499 (71%), Gaps = 8/499 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL +LG ++ A+ +M + T+I E+VL++ L +I ALL+ADV ++V E++ IK
Sbjct: 1 MVLQELGSKLTAALHKMQSVTVISEEVLDKMLKDIAAALLEADVNVRVVMELRKAIKTRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NL++ +AG N+R++IQ+A+ EL MLDPG + KKG P+VIMFVGLQG+GKTTT K
Sbjct: 61 NLEEESAGTNRRKMIQKAVVEELAGMLDPGVKAHEMKKGSPNVIMFVGLQGAGKTTTIAK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
+A ++ +KG+K +VCADTFRAGA+DQL+QNATK + PFYGSYTE+DPVRIA EGV+ FK
Sbjct: 121 FANHYLRKGFKCCMVCADTFRAGAYDQLRQNATKLRCPFYGSYTEADPVRIAQEGVDQFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
E ++IIVDTSGRHKQE ALFEEM+++ A + P VIFV+D++ GQA +QA +F ++
Sbjct: 181 AEKYEVIIVDTSGRHKQETALFEEMQEI-RAAIEPQNVIFVLDATQGQAVHEQASSFHEA 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
+ +G+V++TK+DGHAKGGGALSAVAAT +P++F+G+GEH D+FE F+ FVSRLLGMGD
Sbjct: 240 IDIGSVVITKLDGHAKGGGALSAVAATGAPILFLGSGEHFDDFEPFNAHSFVSRLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G +++I + + D+QPEL++K S+G FTLR MYEQF+N++K+GP+ +V +M+PG S
Sbjct: 300 MRGLVEQIKDTIGDDKQPELMEKFSKGQFTLRDMYEQFENVMKLGPLSKVMAMIPGIPS- 358
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEML 420
M G ES ++KR+M MMDSMT++ELD+ + SRI R+ARGSG EV +L
Sbjct: 359 -MMGGEGDESNNRLKRFMYMMDSMTDDELDAKVDLNKSASRIERVARGSGCHPMEVQMLL 417
Query: 421 EEYKRLAKIWSKMKGLKIPKKGEMS---ALSRNMNA--QHMSKVLPQGMLKQIGGVGGLQ 475
+ +K+ + SKM + K G+ + + RN N Q + K + ML+Q+GG L
Sbjct: 418 KCHKQFESVVSKMGKSGLMKGGDAAMAKQMQRNPNQVMQQLHKAMDPRMLQQMGGAQNLM 477
Query: 476 NLMKQMGSTKDMMGMFGGG 494
++M++M + GM G G
Sbjct: 478 SMMQEMSKLEGEGGMKGLG 496
>gi|71755401|ref|XP_828615.1| signal recognition particle 54 kDa [Trypanosoma brucei TREU927]
gi|70834001|gb|EAN79503.1| signal recognition particle 54 kDa [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
gi|261334497|emb|CBH17491.1| signal recognition particle 54 kDa, putative [Trypanosoma brucei
gambiense DAL972]
Length = 487
Score = 500 bits (1287), Expect = e-139, Method: Compositional matrix adjust.
Identities = 260/491 (52%), Positives = 337/491 (68%), Gaps = 10/491 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LG I AI +MS+ + + E + E LNE+ RALLQADV K V+E+Q N++ V
Sbjct: 1 MVLAELGQKIGAAISKMSSKSFVGEDDVKEFLNEVARALLQADVNVKTVKELQQNVRAEV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ AAG NKR+++Q A+FN + KMLDPG F P KGK S++MFVGLQGSGKTT+CTK
Sbjct: 61 AITAEAAGLNKRKMLQTAVFNGIKKMLDPGVKPFIPAKGKTSIVMFVGLQGSGKTTSCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YA Y Q+KG K LVCADTFRAGA+DQL+QNATKAK+ FYGS TE+DPV IA EGV K
Sbjct: 121 YAAYFQRKGLKTGLVCADTFRAGAYDQLRQNATKAKVRFYGSLTEADPVIIAKEGVLELK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KE DLIIVDTSGRHKQE+ALFEEM+QV +A V P+ ++FVM ++ GQ +QA+ FK+
Sbjct: 181 KEKYDLIIVDTSGRHKQESALFEEMKQVQQA-VKPNDIVFVMSATDGQGIEEQARQFKEK 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V +G+VIVTK+DG AKGGGAL+AVA TKSP++FIGTGEH D+FE+F + FVSR+LGMGD
Sbjct: 240 VPIGSVIVTKLDGQAKGGGALAAVAMTKSPIVFIGTGEHFDDFELFQPESFVSRMLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
+D + + +D EL ++ +G FTLR MYE QN+LKMG + ++ M+PG S
Sbjct: 300 MRALVDSMKD-ANIDTDSELYKRFQDGQFTLRDMYEHLQNVLKMGSVSKIMDMIPGMSGF 358
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMNDSRIMRIARGSGRQVREVMEM 419
G + +K ++ MMDSMT ELD S K M +RI RIARGSG + EV +
Sbjct: 359 TGNAGDAGD--VTLKTFIHMMDSMTAAELDDSRVKKTMTPTRIHRIARGSGHTILEVHNL 416
Query: 420 LEEYKRLAKIWSKMK--GLKIPKKGEMSALSRNMNAQ---HMSKVLPQGMLKQIGGVGGL 474
+ Y + + KM K + +A S M Q ++K L ML+QIGG+ GL
Sbjct: 417 ITSYTKFEDVVKKMGKVNFKAMTQDSSTAFSGKMGQQQVLQLAKALNPTMLRQIGGLTGL 476
Query: 475 QNLMKQMGSTK 485
Q++MKQ+ S K
Sbjct: 477 QDIMKQLQSIK 487
>gi|156086872|ref|XP_001610843.1| signal recognition particle SRP54 protein [Babesia bovis T2Bo]
gi|154798096|gb|EDO07275.1| signal recognition particle SRP54 protein, putative [Babesia bovis]
Length = 499
Score = 500 bits (1287), Expect = e-139, Method: Compositional matrix adjust.
Identities = 267/500 (53%), Positives = 352/500 (70%), Gaps = 10/500 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+L I++A +++ TII E+V++E + +I RALL ADV KLVR+++ N+K V
Sbjct: 1 MVLAELSEQITQAFRKLHARTIITEEVIDEVIGDIVRALLSADVNVKLVRQLRENVKLQV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
L A G NKR+ IQ+A+ E ML + + PKKG ++IMFVGLQG+GKTTTCTK
Sbjct: 61 RLHADALGANKRKFIQKAVIEEFINMLSSDRKPYVPKKGHANIIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
+AY++QKKGW+ AL+CADTFRAGAFDQLKQNA K KIPF+GSY+E++ VR+A EGV FK
Sbjct: 121 FAYHYQKKGWRTALICADTFRAGAFDQLKQNAAKVKIPFFGSYSEANAVRVAAEGVAKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
+E D+IIVDTSGRHKQE +LFEEMR + EA V PD VIFVMDS IGQA +DQA AF +
Sbjct: 181 EEKYDIIIVDTSGRHKQEESLFEEMRLIHEA-VKPDDVIFVMDSHIGQACYDQAAAFNKV 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V VG+VI+TK+DGHAKGGGAL+AVAAT SP+IFIGTGEH D FE FD K FVSR+LGMGD
Sbjct: 240 VDVGSVIITKLDGHAKGGGALAAVAATNSPIIFIGTGEHFDNFEKFDAKSFVSRMLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
+G ++ I E+V M+ E++ ++S G +TLR MYEQ NILKMGP+ QV SM PG
Sbjct: 300 INGLINTIQEIVGMNTNKEMVDRISSGIYTLRDMYEQITNILKMGPLSQVVSMFPGMFPG 359
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEML 420
+ E+ A IK+++ +MDSMT++ELD P +++SRI+RIARGSG + E+ +++
Sbjct: 360 VFDSNSEQVGVANIKKFLCIMDSMTSDELDCDKP--LSESRIVRIARGSGSTIGEINQLM 417
Query: 421 EEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKV---LPQGMLKQIGGVGGLQNL 477
E YK L K+ K+ + K+ L RN Q MS++ + +L ++GG +
Sbjct: 418 EHYKVLQKLVGKLGKSSLSKENVNQTLMRN-PQQMMSRLQQTIDPKLLSRMGGATNVMKF 476
Query: 478 MK---QMGSTKDMMGMFGGG 494
MK QM + MM G G
Sbjct: 477 MKEFSQMDGSAAMMKQMGAG 496
>gi|146087779|ref|XP_001465902.1| putative signal recognition particle [Leishmania infantum JPCM5]
gi|398015951|ref|XP_003861164.1| signal recognition particle, putative [Leishmania donovani]
gi|134070003|emb|CAM68333.1| putative signal recognition particle [Leishmania infantum JPCM5]
gi|322499389|emb|CBZ34462.1| signal recognition particle, putative [Leishmania donovani]
Length = 519
Score = 499 bits (1285), Expect = e-138, Method: Compositional matrix adjust.
Identities = 263/489 (53%), Positives = 348/489 (71%), Gaps = 14/489 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LG I +AI +MS +++ E + E +NEI RALLQADV +V+++Q +IK +
Sbjct: 1 MVLAELGQKIGQAIHRMSAKSMLGEDDVKELMNEIARALLQADVNVTIVKKLQVSIKTEL 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
L + AG NKR+I+Q A+FN L ++LDPG F P KGK +V+MFVGLQGSGKTT+CTK
Sbjct: 61 ALAEEGAGLNKRKILQNAVFNGLKRILDPGVKPFIPVKGKQNVVMFVGLQGSGKTTSCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YA Y Q+KG+K ALVCADTFRAGA+DQL+QNATKAK+ FYGS TE+DPV IA EGV K
Sbjct: 121 YAVYFQRKGFKTALVCADTFRAGAYDQLRQNATKAKVRFYGSLTEADPVAIAKEGVAELK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KE DLIIVDTSGRHKQE+ALFEEM+QV EA V P+ ++FVM ++ GQA +QA+ FK+
Sbjct: 181 KEKYDLIIVDTSGRHKQESALFEEMKQVEEA-VKPNDIVFVMSATDGQAVEEQARNFKEM 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V+VG+VIVTK+D KGGGALSAVAAT+SP++FIGTGEH ++F++F+ + FV ++LGMGD
Sbjct: 240 VAVGSVIVTKLDCQTKGGGALSAVAATRSPIVFIGTGEHFEDFDLFNPERFVQKMLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G MD + + +D E+ ++L +G FT+R MYE QN+LKMG +G++ MLPG S
Sbjct: 300 IGGLMDTMRD-ANIDGNEEVYKRLQDGLFTMRDMYEHLQNVLKMGSVGKIMEMLPGMSGH 358
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMNDSRIMRIARGSGRQVREVMEM 419
G++ + +K ++ M+DSMT ELD + K+M SR+ RIARGSG V EV +
Sbjct: 359 AATAGQQGD--IALKGFIHMLDSMTVAELDEAKVKKMMTPSRMHRIARGSGHSVVEVQNL 416
Query: 420 LEEYKRLAKIWSKMKGLKIPKKGEMSALS----RNMNAQHM---SKVLPQGMLKQIGGVG 472
+ Y + +I KM KI K M S +M Q M +K+L ML+QIGGVG
Sbjct: 417 IISYTKFEEIVKKMG--KINFKAMMQDSSGPAAGHMGQQQMGQLAKLLNPNMLRQIGGVG 474
Query: 473 GLQNLMKQM 481
GLQ +MKQ+
Sbjct: 475 GLQGMMKQL 483
>gi|237830449|ref|XP_002364522.1| signal recognition particle 54 kda protein, putative [Toxoplasma
gondii ME49]
gi|211962186|gb|EEA97381.1| signal recognition particle 54 kda protein, putative [Toxoplasma
gondii ME49]
gi|221507395|gb|EEE32999.1| signal recognition particle 54 kda protein, putative [Toxoplasma
gondii VEG]
Length = 582
Score = 499 bits (1284), Expect = e-138, Method: Compositional matrix adjust.
Identities = 252/434 (58%), Positives = 329/434 (75%), Gaps = 7/434 (1%)
Query: 60 VNLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCT 119
+N A G N R+IIQ+ + +E+ ML P + + P+KG +VIMFVGLQGSGKTTTCT
Sbjct: 132 INTRAAAVGVNSRKIIQKCVISEIVAMLTPARQPYVPRKGATNVIMFVGLQGSGKTTTCT 191
Query: 120 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
KYA+Y+Q+KGW+ ALVCADTFRAGAFDQLKQNATK +IPFYGSYTE+DPV+IA EGVE F
Sbjct: 192 KYAHYYQRKGWRVALVCADTFRAGAFDQLKQNATKVRIPFYGSYTEADPVKIAEEGVEQF 251
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQ 239
++E D+IIVDTSGRHKQEAALF+EM+QV+EA V+PD V+FVMDS IGQA FDQAQAF
Sbjct: 252 RREKYDMIIVDTSGRHKQEAALFDEMKQVAEA-VDPDDVVFVMDSHIGQACFDQAQAFSD 310
Query: 240 SVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMG 299
SV VG+VIVTK+DGHAKGGGALSAVAAT +P+IF+G+GEH D+FE F+ FVSRLLG+G
Sbjct: 311 SVDVGSVIVTKLDGHAKGGGALSAVAATGAPIIFLGSGEHFDDFEAFEANSFVSRLLGLG 370
Query: 300 DWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSS 359
D G + E+V +++Q EL+ +LS+G FTL M EQF+N+LKMGPI +V SM+PG S
Sbjct: 371 DVGGLFSTLKEMVSVEKQQELMDRLSKGRFTLEDMGEQFRNVLKMGPISKVISMVPGIGS 430
Query: 360 ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEM 419
L+ K +E+ +IKR++ +MDSMT+EEL K DSRI+R+A+GSG + EV +
Sbjct: 431 NLISKNQEQAGVMRIKRFLCIMDSMTDEELKCE--KQFTDSRIVRVAQGSGTTLEEVKLL 488
Query: 420 LEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKV---LPQGMLKQIGGVGGLQN 476
LE++K+ +K+ KM + + K+ + + RN Q MSKV L +LKQ+GG G + N
Sbjct: 489 LEQHKQFSKMVGKMGKIGLTKESALQNMMRNPQ-QMMSKVQNMLDPRILKQMGGAGNMVN 547
Query: 477 LMKQMGSTKDMMGM 490
L++++ S + M GM
Sbjct: 548 LLRELQSNEGMEGM 561
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 45/61 (73%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LG IS A++++ AT++DE+V+ EC+ + RALLQADV ++V++ + ++ +
Sbjct: 1 MVLAELGEQISGALRRLHTATVVDEQVVQECVMAVCRALLQADVHVRVVQQFKASVTAGI 60
Query: 61 N 61
N
Sbjct: 61 N 61
>gi|328874643|gb|EGG23008.1| signal recognition particle 54 kDa subunit [Dictyostelium
fasciculatum]
Length = 502
Score = 498 bits (1283), Expect = e-138, Method: Compositional matrix adjust.
Identities = 269/511 (52%), Positives = 357/511 (69%), Gaps = 34/511 (6%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA G IS A+ MSN+TII+E+ +N L E+ AL +ADV L+ +M+ NI+ +
Sbjct: 1 MVLADWGNQISSALAAMSNSTIINEETINHLLKEVGNALSRADVSMSLIIKMRKNIQAQI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
LD +AAG NKRRII++ +F+EL K+LDPG + P KGK ++IMFVGLQG+GKTT+ TK
Sbjct: 61 KLDQMAAGLNKRRIIRKVVFDELIKLLDPGVTPWKPTKGKSNIIMFVGLQGAGKTTSVTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A+++++KGW A+VCADTFRAGAF QL+ NATKAKIPFYGS +E DPV A +GVE F+
Sbjct: 121 LAHFYKRKGWNTAMVCADTFRAGAFAQLQHNATKAKIPFYGSESEKDPVAAAKKGVEIFR 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KE ++IIVDTSGRHKQE+ LF+EM ++ E + PD VIFVMDSSIGQAA+DQA AFK S
Sbjct: 181 KEGAEIIIVDTSGRHKQESELFKEMSEI-ETVIQPDNVIFVMDSSIGQAAYDQAMAFKTS 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V VG+VI+TKMDG++KGGGA+SAVAAT+SP+IFIG+GEH+ + E+F+ FVS+LLG+GD
Sbjct: 240 VKVGSVIITKMDGNSKGGGAISAVAATQSPIIFIGSGEHIPDLEIFNPTSFVSKLLGLGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
+G ++ I +VVP D P +++SEGNFT R M +QFQ I+ MGPI ++ M PG S+
Sbjct: 300 VNGMVEMIQDVVPPD--PNAWKEMSEGNFTFRNMKQQFQQIMNMGPIEKIVQMFPGMSN- 356
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEML 420
MP + E K+K YMT++DSMT++ELD K MN SR++RIARGSGR REV E+
Sbjct: 357 -MPMLQGGEGNLKLKAYMTILDSMTDDELDGK--KQMNPSRMLRIARGSGRHPREVGELT 413
Query: 421 EEYKRLAKIWSKMKGL----KIPKKGEMSALSRNMNAQHMSKVLP-------------QG 463
E+ K K++ K GL + G+ + N Q ++ ++P Q
Sbjct: 414 EQKKMFEKMFKKGGGLSNLANMAGGGKGGQMPNPKNLQQLAGMVPPQMMKQMGGMGGIQS 473
Query: 464 MLKQIGGVGGLQNL-MKQMGSTKDMMGMFGG 493
ML Q L+N+ MK MG DMM FGG
Sbjct: 474 MLGQ------LKNMNMKGMG---DMMKNFGG 495
>gi|23295846|gb|AAN12396.1| signal recognition particle 54 kDa [Trypanosoma brucei]
Length = 487
Score = 498 bits (1282), Expect = e-138, Method: Compositional matrix adjust.
Identities = 259/491 (52%), Positives = 336/491 (68%), Gaps = 10/491 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LG I AI +MS+ + + E + E NE+ RALLQADV K V+E+Q N++ V
Sbjct: 1 MVLAELGQKIGAAISKMSSKSFVGEDDVKEFXNEVARALLQADVNVKTVKELQQNVRAEV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ AAG NKR+++Q A+FN + KMLDPG F P KGK S++MFVGLQGSGKTT+CTK
Sbjct: 61 AITAEAAGLNKRKMLQTAVFNGIKKMLDPGVKPFIPAKGKTSIVMFVGLQGSGKTTSCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YA Y Q+KG K LVCADTFRAGA+DQL+QNATKAK+ FYGS TE+DPV IA EGV K
Sbjct: 121 YAAYFQRKGLKTGLVCADTFRAGAYDQLRQNATKAKVRFYGSLTEADPVIIAKEGVLELK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KE DLIIVDTSGRHKQE+ALFEEM+QV +A V P+ ++FVM ++ GQ +QA+ FK+
Sbjct: 181 KEKYDLIIVDTSGRHKQESALFEEMKQVQQA-VKPNDIVFVMSATDGQGIEEQARQFKEK 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V +G+VIVTK+DG AKGGGAL+AVA TKSP++FIGTGEH D+FE+F + FVSR+LGMGD
Sbjct: 240 VPIGSVIVTKLDGQAKGGGALAAVAMTKSPIVFIGTGEHFDDFELFQPESFVSRMLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
+D + + +D EL ++ +G FTLR MYE QN+LKMG + ++ M+PG S
Sbjct: 300 MRALVDSMKD-ANIDTDSELYKRFQDGQFTLRDMYEHLQNVLKMGSVSKIMDMIPGMSGF 358
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMNDSRIMRIARGSGRQVREVMEM 419
G + +K ++ MMDSMT ELD S K M +RI RIARGSG + EV +
Sbjct: 359 TGNAGDAGD--VTLKTFIHMMDSMTAAELDDSRVKKTMTPTRIHRIARGSGHTILEVHNL 416
Query: 420 LEEYKRLAKIWSKMK--GLKIPKKGEMSALSRNMNAQ---HMSKVLPQGMLKQIGGVGGL 474
+ Y + + KM K + +A S M Q ++K L ML+QIGG+ GL
Sbjct: 417 ITSYTKFEDVVKKMGKVNFKAMTQDSSTAFSGKMGQQQVLQLAKALNPTMLRQIGGLTGL 476
Query: 475 QNLMKQMGSTK 485
Q++MKQ+ S K
Sbjct: 477 QDIMKQLQSIK 487
>gi|325180969|emb|CCA15378.1| signal recognition particle putative [Albugo laibachii Nc14]
Length = 509
Score = 496 bits (1278), Expect = e-138, Method: Compositional matrix adjust.
Identities = 257/507 (50%), Positives = 359/507 (70%), Gaps = 17/507 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL QLG + A+ ++ TI+D++VLN + ++ ALL++DVQ +LVR+++ N++ V
Sbjct: 1 MVLEQLGSKLQSALAALNTTTIVDDEVLNNIMKDVCAALLESDVQVQLVRQIRDNVRLTV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ AAG N+RR+IQ+A+ ++L ++L K F KKG + +MFVGLQGSGKTT+ K
Sbjct: 61 AAHESAAGVNRRRLIQKAVLDQLIQILQSKKKPFKLKKGSCNTVMFVGLQGSGKTTSIAK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YA+Y+Q+KGWK +VCADTFRAGAFDQLKQNATK +IPFYGSYTE+DPVRIA +GV F+
Sbjct: 121 YAHYYQRKGWKTCMVCADTFRAGAFDQLKQNATKLRIPFYGSYTEADPVRIAEQGVAQFR 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
++ +LI+VDTSGRHKQE LF EM+QV+ A V PD V+FVMDS+IGQA +DQ+ AF QS
Sbjct: 181 ADHYELILVDTSGRHKQETDLFAEMKQVA-AAVRPDDVVFVMDSTIGQAVYDQSSAFVQS 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V VG+VI+TK+DGHAKGGGALSAVAAT SP+IF GTGEH E E FD + FVSR++GMGD
Sbjct: 240 VDVGSVIITKLDGHAKGGGALSAVAATGSPIIFYGTGEHFSELETFDAQRFVSRMMGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFS-- 358
G M+++ + D + EL+ K +G++TLR +Y+Q Q ++KMGP+ +V SM+PG
Sbjct: 300 IRGLMEEVKQSGIFDDEKELMSKFQKGSYTLRDLYKQLQGVMKMGPLSKVMSMIPGLPPG 359
Query: 359 -SELMP-KGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREV 416
+++M G E+E +++R++ MMDSMT+ ELD P +N SR +RIA+GSG + EV
Sbjct: 360 MNQMMNMGGGEEEGSKRLRRFLFMMDSMTDAELDGQVP--INPSRQIRIAKGSGCGLFEV 417
Query: 417 MEMLEEYKRLAKIWSKMKGLKIPKKGEMS---ALSRNMNA--QHMSKVLPQGMLKQIGGV 471
+L+ +K+ A + S+M + K G+ L+RN NA Q +SKV+ +L Q+GG
Sbjct: 418 DYLLKCHKQFATVISRMGKSGLMKTGDAGFEKQLARNPNAVMQQLSKVMDSRVLAQMGGP 477
Query: 472 GGLQNLMKQM-----GSTKDMMGMFGG 493
+ ++KQM S +M FGG
Sbjct: 478 QNMMRMLKQMQGMDSNSMNEMAANFGG 504
>gi|342185665|emb|CCC95150.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 509
Score = 496 bits (1278), Expect = e-138, Method: Compositional matrix adjust.
Identities = 255/491 (51%), Positives = 338/491 (68%), Gaps = 10/491 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LG I AI +MS+ + + E + E LNE+ RALLQADV K+V+E+Q N++ V
Sbjct: 23 MVLAELGQKIGAAISKMSSKSFVGEDDVKEFLNEVARALLQADVNIKIVKELQNNVRAEV 82
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ AAG NKR+++Q A+FN + K+LDPG F P KGK +++MFVGLQGSGKTT+CTK
Sbjct: 83 AITAEAAGLNKRKMLQAAVFNGIKKILDPGVKPFVPAKGKTNIVMFVGLQGSGKTTSCTK 142
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YA Y Q+KG+K LVCADTFRAGA+DQL+QNATKAKI FYGS TE+DPV IA EGV K
Sbjct: 143 YAAYFQRKGFKTGLVCADTFRAGAYDQLRQNATKAKIRFYGSLTEADPVLIAKEGVMELK 202
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KE DLII+DTSGRHKQE+ALFEEM++V EA V P+ ++FVM ++ GQ DQA+ FK+
Sbjct: 203 KEKYDLIIIDTSGRHKQESALFEEMKEVQEA-VKPNDIVFVMSATDGQGVEDQARQFKEK 261
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V +G+VIVTK+DG AKGGGAL+AVA TKSP++FIGTGEH D+FE+F FV R+LGMGD
Sbjct: 262 VPIGSVIVTKLDGQAKGGGALAAVAMTKSPIVFIGTGEHFDDFELFQPDRFVGRMLGMGD 321
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
+D + + +D L ++L EG FT+R MYE QN+LKMG + ++ M+PG S
Sbjct: 322 MQSLVDSMKD-ANIDTDSVLYKRLQEGQFTMRDMYEHLQNVLKMGSVSKIMDMIPGMSG- 379
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMNDSRIMRIARGSGRQVREVMEM 419
M S A +K ++ MMDSMT+ ELD K M +R+ RIARGSG + EV +
Sbjct: 380 -MSGCAGDSSDATLKSFIHMMDSMTSAELDDGRVKKTMTPTRLHRIARGSGHTMFEVHNL 438
Query: 420 LEEYKRLAKIWSKMK--GLKIPKKGEMSALSRNMNAQ---HMSKVLPQGMLKQIGGVGGL 474
+ Y + + KM K + +A S + Q ++K L ML+Q+GG+ GL
Sbjct: 439 INSYTKFEDVVKKMGKVNFKAMTQDSSTAFSGRVGQQQVTQLAKALNPAMLRQLGGLSGL 498
Query: 475 QNLMKQMGSTK 485
Q++MKQ+ + K
Sbjct: 499 QDIMKQLQNVK 509
>gi|294948604|ref|XP_002785803.1| signal recognition particle 54 kDa protein 2 [Perkinsus marinus
ATCC 50983]
gi|239899911|gb|EER17599.1| signal recognition particle 54 kDa protein 2 [Perkinsus marinus
ATCC 50983]
Length = 506
Score = 496 bits (1276), Expect = e-137, Method: Compositional matrix adjust.
Identities = 255/497 (51%), Positives = 351/497 (70%), Gaps = 15/497 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATII----DEKVLNECLNEITRALLQADVQFKLVREMQTNI 56
MVL L ++ A++ + A D++ L ECL EI +ALLQADV K V +++ +I
Sbjct: 1 MVLNDLSSQLTSALRSLQKAASSLNEEDDEPLEECLKEIAKALLQADVNVKYVSKLRQSI 60
Query: 57 KKIVNLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTT 116
+ + L + A N+ + +++ +F+EL K+L P + T KG+ +V+MFVGLQGSGKTT
Sbjct: 61 RTQMKLYE-GAAINRHKTVRKLVFDELVKLLTPSRAPRTLTKGRSNVVMFVGLQGSGKTT 119
Query: 117 TCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGV 176
+CTKYA Y+Q++GWK ALVCADTFRAGAFDQL+QNATKA IPFYGS+T +DPV++A EGV
Sbjct: 120 SCTKYALYYQRRGWKVALVCADTFRAGAFDQLRQNATKALIPFYGSHTITDPVQVASEGV 179
Query: 177 ETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQA 236
E FK+E DLIIVDTSGRHKQE ALF+EM+QVSEA V PD VIFVMDS IGQA QA A
Sbjct: 180 ELFKEERYDLIIVDTSGRHKQELALFDEMKQVSEA-VKPDDVIFVMDSHIGQACSAQAAA 238
Query: 237 FKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLL 296
F +V VG+VI+TK+DGHAKGGGALSAVAAT SP+IFIGTGEH+D+FE F+VK FV RLL
Sbjct: 239 FSNAVDVGSVIITKLDGHAKGGGALSAVAATDSPIIFIGTGEHLDDFERFEVKGFVGRLL 298
Query: 297 GMGDWSGFMDKIHEVVPMDQQPELLQKLSEGN-FTLRIMYEQFQNILKMGPIGQVFSMLP 355
G+GD +G D I V +D+Q + +++L G FTLR +Y Q Q ++ MG + ++ SMLP
Sbjct: 299 GIGDLAGLADSIANAVDIDEQKKTMERLQAGKAFTLRDLYSQLQAVMNMGSMSKMLSMLP 358
Query: 356 GFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVRE 415
G +P ++ S +IKR++ MMDS+T E+DS+ P + +RIMRI+RGSG
Sbjct: 359 GMGGSSLPTMSDEASVKRIKRFLVMMDSLTAAEMDSAKP-ITEGTRIMRISRGSGSHPYA 417
Query: 416 VMEMLEEYKRLAKIWSKM--KGLKIPKKGEMSALSRNMNAQHMSKV---LPQGMLKQIGG 470
V+E++EE+K++ K+ +M GL + K G+++ + RN Q +SK+ + L ++GG
Sbjct: 418 VIELIEEHKKMQKMLQRMGKTGL-LSKAGDLTNMVRNPQ-QVISKLKASVDHDTLAKMGG 475
Query: 471 VGGLQNLMKQMGSTKDM 487
++MK+M ++M
Sbjct: 476 AENFFSMMKEMEQNEEM 492
>gi|221487598|gb|EEE25830.1| signal recognition particle 54 kda protein, putative [Toxoplasma
gondii GT1]
Length = 714
Score = 493 bits (1270), Expect = e-137, Method: Compositional matrix adjust.
Identities = 249/432 (57%), Positives = 329/432 (76%), Gaps = 7/432 (1%)
Query: 60 VNLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCT 119
+N A G N R+IIQ+ + +E+ ML P + + P+KG +VIMFVGLQGSGKTTTCT
Sbjct: 132 INTRAAAVGVNSRKIIQKCVISEIVAMLTPARQPYVPRKGATNVIMFVGLQGSGKTTTCT 191
Query: 120 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
KYA+Y+Q+KGW+ ALVCADTFRAGAFDQLKQNATK +IPFYGSYTE+DPV+IA EGVE F
Sbjct: 192 KYAHYYQRKGWRVALVCADTFRAGAFDQLKQNATKVRIPFYGSYTEADPVKIAEEGVEQF 251
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQ 239
++E D+IIVDTSGRHKQEAALF+EM+QV+EA V+PD V+FVMDS IGQA FDQAQAF +
Sbjct: 252 RREKYDMIIVDTSGRHKQEAALFDEMKQVAEA-VDPDDVVFVMDSHIGQACFDQAQAFSE 310
Query: 240 SVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMG 299
SV VG+VIVTK+DGHAKGGGALSAVAAT +P+IF+G+GEH D+FE F+ FVSRLLG+G
Sbjct: 311 SVDVGSVIVTKLDGHAKGGGALSAVAATGAPIIFLGSGEHFDDFEAFEANSFVSRLLGLG 370
Query: 300 DWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSS 359
D G + E+V +++Q EL+ +LS+G FTL M EQF+N+LKMGPI +V SM+PG S
Sbjct: 371 DVGGLFSTLKEMVSVEKQQELMDRLSKGRFTLEDMGEQFRNVLKMGPISKVISMVPGIGS 430
Query: 360 ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEM 419
L+ K +E+ +IKR++ +MDSMT+EEL K DSRI+R+A+GSG + EV +
Sbjct: 431 NLISKNQEQAGVMRIKRFLCIMDSMTDEELKCE--KQFTDSRIVRVAQGSGTTLEEVKLL 488
Query: 420 LEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKV---LPQGMLKQIGGVGGLQN 476
LE++K+ +K+ KM + + K+ + + RN Q MSKV L +LKQ+GG G + N
Sbjct: 489 LEQHKQFSKMVGKMGKIGLTKESALQNMMRNPQ-QMMSKVQNMLDPRILKQMGGAGNMVN 547
Query: 477 LMKQMGSTKDMM 488
L++++ +T ++
Sbjct: 548 LLREVKNTLTLL 559
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 45/61 (73%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LG IS A++++ AT++DE+V+ EC+ + RALLQADV ++V++ + ++ +
Sbjct: 1 MVLAELGEQISGALRRLHTATVVDEQVVQECVMAVCRALLQADVHVRVVQQFKASVTAGI 60
Query: 61 N 61
N
Sbjct: 61 N 61
>gi|401411601|ref|XP_003885248.1| Signal recognition particle GTPase, related [Neospora caninum
Liverpool]
gi|325119667|emb|CBZ55220.1| Signal recognition particle GTPase, related [Neospora caninum
Liverpool]
Length = 583
Score = 492 bits (1267), Expect = e-136, Method: Compositional matrix adjust.
Identities = 248/434 (57%), Positives = 329/434 (75%), Gaps = 7/434 (1%)
Query: 60 VNLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCT 119
+N A G N R+IIQ+ + +E+ ML P + + P+KG +VIMFVGLQGSGKTTTCT
Sbjct: 133 INTRAAAVGVNSRKIIQKCVISEIVAMLTPARQPYVPRKGATNVIMFVGLQGSGKTTTCT 192
Query: 120 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
K+A+Y+Q+KGW+ ALVCADTFRAGAFDQLKQNATK +IPFYGSYTE+DPV+IA EGVE F
Sbjct: 193 KFAHYYQRKGWRVALVCADTFRAGAFDQLKQNATKVRIPFYGSYTEADPVKIAEEGVEQF 252
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQ 239
+KE D+IIVDTSGRHKQEAALF+EM+QV+EA V+PD V+FVMDS IGQA F+QAQAF +
Sbjct: 253 RKEKYDMIIVDTSGRHKQEAALFDEMKQVAEA-VDPDDVVFVMDSHIGQACFEQAQAFSE 311
Query: 240 SVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMG 299
SV VG+VI+TK+DGHAKGGGALSAVAAT +P+IF+G+GEH D+FE F+ FVSRLLG+G
Sbjct: 312 SVDVGSVIITKLDGHAKGGGALSAVAATGAPIIFLGSGEHFDDFEAFEANSFVSRLLGLG 371
Query: 300 DWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSS 359
D G + E+V +++Q EL+ +LS+G FTL M EQF+N+LKMGPI +V SM+PG S
Sbjct: 372 DVGGLFSTLKEMVSVEKQQELMDRLSKGRFTLEDMGEQFRNVLKMGPISKVISMVPGIGS 431
Query: 360 ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEM 419
L+ K +E+ +IKR++ +MDSMT+EEL K DSRI+R+A+GSG + EV +
Sbjct: 432 NLISKNQEQAGVMRIKRFLCIMDSMTDEELKCD--KQFTDSRILRVAQGSGTSLEEVKIL 489
Query: 420 LEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKV---LPQGMLKQIGGVGGLQN 476
L+++K+ +K+ KM + + K+ + + RN Q MSKV L +LKQ+GG G + N
Sbjct: 490 LDQHKQFSKMVGKMGKIGLTKESALQNMMRNPQ-QMMSKVQNMLDPRILKQMGGAGNMVN 548
Query: 477 LMKQMGSTKDMMGM 490
L++++ S + M M
Sbjct: 549 LLRELQSKEGMEDM 562
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 45/61 (73%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LG IS A++++ AT++DE+V+ EC+ + RALLQADV ++V++ + ++ +
Sbjct: 1 MVLAELGEQISGALRRLHTATVVDEQVVQECVMAVCRALLQADVHVRVVQQFKASVTAGI 60
Query: 61 N 61
N
Sbjct: 61 N 61
>gi|426376696|ref|XP_004055129.1| PREDICTED: signal recognition particle 54 kDa protein [Gorilla
gorilla gorilla]
Length = 502
Score = 491 bits (1265), Expect = e-136, Method: Compositional matrix adjust.
Identities = 261/514 (50%), Positives = 358/514 (69%), Gaps = 38/514 (7%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNATII+E+VLN L E+ ALL+ADV KLV++++ N+K +
Sbjct: 1 MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENVKSAI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+L+++A+G NKR++IQ A+F EL K++DPG ++TP KGK +VIMFVGLQGSGKTTTC+K
Sbjct: 61 DLEEMASGLNKRKMIQHAVFKELVKLVDPGVKAWTPTKGKQNVIMFVGLQGSGKTTTCSK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPF------------YGSYTESDP 168
C+ +L + +I F SYTE DP
Sbjct: 121 --------------TCSRIILGFGIGKLDNASCFFRIVFGSFVVLLNHLSMLYSYTEMDP 166
Query: 169 VRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQ 228
V IA EGVE FK EN ++IIVDTSGRHKQE +LFEEM QV+ A + PD +++VMD+SIGQ
Sbjct: 167 VIIASEGVEKFKNENFEIIIVDTSGRHKQEDSLFEEMLQVANA-IQPDNIVYVMDASIGQ 225
Query: 229 AAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDV 288
A QA+AFK V V +VIVTK+DGHAKGGGALSAVAATKSP+IFIGTGEH+D+FE F
Sbjct: 226 ACEAQAKAFKDKVDVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKT 285
Query: 289 KPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIG 348
+PF+S+LLGMGD G +DK++E + +D L++KL G FTLR MYEQFQNI+KMGP
Sbjct: 286 QPFISKLLGMGDIEGLIDKVNE-LKLDDNEALIEKLKHGQFTLRDMYEQFQNIMKMGPFS 344
Query: 349 QVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRI 405
Q+ M+PGF ++ M KG E+ES A++K+ MT+MDSM ++ELDS++ K+ + RI R+
Sbjct: 345 QILGMIPGFGTDFMSKGNEQESMARLKKLMTIMDSMNDQELDSTDGAKVFSKQPGRIQRV 404
Query: 406 ARGSGRQVREVMEMLEEYKRLAKIWSKMKGLK-IPKKGEMSA-LSRNMNA---QHMSKVL 460
ARGSG R+V E+L +Y + A++ KM G+K + K G+MS +S++ A Q M+K++
Sbjct: 405 ARGSGVSTRDVQELLTQYTKFAQMVKKMGGIKGLFKGGDMSKNVSQSQMAKLNQQMAKMM 464
Query: 461 PQGMLKQIGGVGGLQNLMKQM--GSTKDMMGMFG 492
+L +GG+ GLQ++M+Q G+ +M GM G
Sbjct: 465 DPRVLHHMGGMAGLQSMMRQFQQGAAGNMKGMMG 498
>gi|340058713|emb|CCC53073.1| putative signal recognition particle [Trypanosoma vivax Y486]
Length = 487
Score = 491 bits (1265), Expect = e-136, Method: Compositional matrix adjust.
Identities = 259/491 (52%), Positives = 336/491 (68%), Gaps = 10/491 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LG I AI +MS+ + + E + E LN++ ALLQADV K V+E+Q ++ V
Sbjct: 1 MVLAELGQKIGAAISKMSSKSFVGEDDVKEFLNDVGCALLQADVNVKTVKELQKSVLSEV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ A G NKR+++Q A+FN + KMLDPG FTP KGK SV+MFVGLQG+GKTT+CTK
Sbjct: 61 AITSEAVGLNKRKMLQTAVFNGIKKMLDPGVKPFTPVKGKTSVVMFVGLQGAGKTTSCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YA Y+Q+KG+K LVCADTFRAGA+DQL+QNATKAKI FYGS TE+DP IA EGV K
Sbjct: 121 YAAYYQRKGFKTGLVCADTFRAGAYDQLRQNATKAKIRFYGSLTEADPAIIAKEGVAELK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
+E +LIIVDTSGRHKQE+ALFEEM+QV +A V P+ V+FVM ++ GQ +QA+ FK+
Sbjct: 181 REKYELIIVDTSGRHKQESALFEEMKQVQDA-VQPNDVVFVMSATDGQGIEEQARQFKEH 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V VG+VIVTK+DG AKGGGAL+AV +TKSP++FIGTGEH DEFE+F + FVSRLLGMGD
Sbjct: 240 VPVGSVIVTKLDGQAKGGGALAAVVSTKSPIVFIGTGEHFDEFELFQPESFVSRLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
+D + + +D EL ++ EG FT+R MYE QN+LKMG + ++ MLPG + +
Sbjct: 300 MRALVDTMKD-ANIDTDSELYKRFQEGQFTMRDMYEHLQNVLKMGSMSKIMGMLPGMAGQ 358
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMNDSRIMRIARGSGRQVREVMEM 419
G + IK ++ +MDSMT ELD S K+M SRI R+ARGSG + EV +
Sbjct: 359 SDAAGEMGD--VTIKSFIHIMDSMTGVELDDSRVKKMMTPSRIHRVARGSGHSILEVQNL 416
Query: 420 LEEYKRLAKIWSKMKGLKIPKKGE--MSALSRNMNAQHMS---KVLPQGMLKQIGGVGGL 474
+ Y + + KM + E S LS + Q MS K L ML+QIGG+ GL
Sbjct: 417 INSYMKFEDVVKKMGKVNFKAMSEDPGSILSGRLGQQQMSQLAKALNPTMLRQIGGLSGL 476
Query: 475 QNLMKQMGSTK 485
Q +MKQ+ K
Sbjct: 477 QEMMKQLQGIK 487
>gi|327291942|ref|XP_003230679.1| PREDICTED: signal recognition particle 54 kDa protein-like, partial
[Anolis carolinensis]
Length = 425
Score = 491 bits (1263), Expect = e-136, Method: Compositional matrix adjust.
Identities = 243/426 (57%), Positives = 324/426 (76%), Gaps = 18/426 (4%)
Query: 80 FNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADT 139
+ + +++DPG ++TP KGK ++IMFVGLQGSGKTT+C+K AYY+Q+KGWK L+CADT
Sbjct: 1 YTIILQLVDPGVKAWTPTKGKQNIIMFVGLQGSGKTTSCSKLAYYYQRKGWKTCLICADT 60
Query: 140 FRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEA 199
+RAGAFDQLKQNATKA+IPFYGSYTE DPV IA EGVE FK EN ++IIVDTSGRHKQE
Sbjct: 61 YRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGVEKFKNENFEIIIVDTSGRHKQED 120
Query: 200 ALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGG 259
+LFEEM QV+ A + PD +++VMD+SIGQA QA+AFK V V +VIVTK+DGHAKGGG
Sbjct: 121 SLFEEMLQVANA-IQPDNIVYVMDASIGQACEAQAKAFKDKVDVASVIVTKLDGHAKGGG 179
Query: 260 ALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPE 319
ALSAVAATKSP+IFIGTGEH+D+FE F +PF+S+LLGMGD G +DK++E + +D
Sbjct: 180 ALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLLGMGDIEGLIDKVNE-LKLDDNEA 238
Query: 320 LLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMT 379
L++KL G FTLR MYEQFQNI+KMGP Q+ M+PGF ++ M KG E+ES A++++ MT
Sbjct: 239 LIEKLKHGQFTLRDMYEQFQNIMKMGPFSQILGMIPGFGTDFMSKGNEQESMARLRKLMT 298
Query: 380 MMDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGL 436
+MDSM ++ELDS++ K+ + RI R+ARGSG R+V E+L +Y + A++ KM G+
Sbjct: 299 IMDSMNDQELDSTDGAKVFSKQPGRIQRVARGSGVSTRDVQELLTQYTKFAQMVKKMGGI 358
Query: 437 K-IPKKGEMSALSRNMNA-------QHMSKVLPQGMLKQIGGVGGLQNLMKQM--GSTKD 486
K + K G+M S+N+N Q M+K++ +L +GG+ GLQ++M+Q G+ +
Sbjct: 359 KGLFKGGDM---SKNVNPSQMAKLNQQMAKMMDPRVLHHMGGMAGLQSMMRQFQQGAAGN 415
Query: 487 MMGMFG 492
M GM G
Sbjct: 416 MKGMMG 421
>gi|407425446|gb|EKF39427.1| signal recognition particle, putative [Trypanosoma cruzi
marinkellei]
Length = 484
Score = 487 bits (1253), Expect = e-135, Method: Compositional matrix adjust.
Identities = 258/491 (52%), Positives = 339/491 (69%), Gaps = 13/491 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LG I AI +MS+ ++ E + E LNE+ RALLQADV V+E+Q I+ V
Sbjct: 1 MVLAELGQKIGGAISKMSSKPLLGEDDVKEFLNEVARALLQADVHVTTVKELQQTIRAEV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ A G NKR+++Q A+F+ L ++LDPG F P KGK +++MFVGLQGSGKTT+CTK
Sbjct: 61 AITSEAVGLNKRKMLQTAVFSGLKRILDPGIKPFIPAKGKTNIVMFVGLQGSGKTTSCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YA Y Q+KG K ALVCADTFRAGA+DQL+QNATKAKI FYGS TE+DPV IA EGV +
Sbjct: 121 YAAYFQRKGLKTALVCADTFRAGAYDQLRQNATKAKIRFYGSLTEADPVIIAKEGVTELE 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KE DLII+DTSGRHKQE+ALFEEM+QV EA V P+ ++FVM ++ GQ +QAQ FK+
Sbjct: 181 KEKYDLIIIDTSGRHKQESALFEEMKQVQEA-VKPNDIVFVMSATDGQGIREQAQQFKEK 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V VG+VI+TK+DGHAKGGGAL+AVA TKSP++FIGTGEH ++FE+F + FVSR+LGMGD
Sbjct: 240 VPVGSVIITKLDGHAKGGGALAAVAMTKSPIVFIGTGEHFEDFELFQPESFVSRMLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
MD + + +D EL ++L +G FT+R MYE QN+LK+GP+ +V +++PG SS
Sbjct: 300 MRALMDTMKD-AKIDTDSELYKRLQDGLFTMRDMYEHLQNLLKLGPVSKVMNLIPGMSSF 358
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMNDSRIMRIARGSGRQVREVMEM 419
G + +K + +MDSMT ELD + K M SRI+R+ARGSG + EV ++
Sbjct: 359 SGFAG--EVGDVALKSLIHIMDSMTASELDDARVKKTMTPSRILRVARGSGHSIHEVHKL 416
Query: 420 LEEYKRLAKIWSKMK--GLKIPKKGEMSALSRNMNAQHMS---KVLPQGMLKQIGGVGGL 474
++ Y ++ KM K K LS M Q M+ KVL ML+Q+GGV
Sbjct: 417 IKMYTNFEEMVKKMGKMNFKAMSKDPSGMLSGRMGQQQMTQLAKVLNPAMLQQMGGV--- 473
Query: 475 QNLMKQMGSTK 485
Q LMKQ+ + K
Sbjct: 474 QGLMKQLKNLK 484
>gi|294889453|ref|XP_002772820.1| signal recognition particle 54 kDa protein 2 [Perkinsus marinus
ATCC 50983]
gi|239877370|gb|EER04636.1| signal recognition particle 54 kDa protein 2 [Perkinsus marinus
ATCC 50983]
Length = 508
Score = 486 bits (1250), Expect = e-134, Method: Compositional matrix adjust.
Identities = 252/498 (50%), Positives = 349/498 (70%), Gaps = 15/498 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATII----DEKVLNECLNEITRALLQADVQFKLVREMQTNI 56
MVL L ++ A++ + A D++ L ECL EI +ALLQADV K V +++ +I
Sbjct: 1 MVLNDLSSQLTSALRSLQKAASSLNEEDDEPLEECLKEIAKALLQADVNVKYVSKLRQSI 60
Query: 57 KKIVNLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTT 116
+ + L + AA N+ + +++ +F+EL K+L P + T KG+ +V+MFVGLQGSGKTT
Sbjct: 61 RTQMKLYEGAA-INRHKTVRKLVFDELVKLLTPSRAPRTLTKGRSNVVMFVGLQGSGKTT 119
Query: 117 TCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGV 176
+CTKYA Y+Q++GWK ALVCADTFRAGAFDQL+QNATKA IPFYGS+T +DPV++A EGV
Sbjct: 120 SCTKYALYYQRRGWKVALVCADTFRAGAFDQLRQNATKALIPFYGSHTITDPVQVASEGV 179
Query: 177 ETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSE-ATVNPDLVIFVMDSSIGQAAFDQAQ 235
E FK+E DLIIVDTSGRHKQE ALF+EM+QV + + D VIFVMDS IGQA QA
Sbjct: 180 ELFKEERYDLIIVDTSGRHKQELALFDEMKQVRQWGSGEADDVIFVMDSHIGQACSAQAA 239
Query: 236 AFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRL 295
AF +V VG+VI+TK+DGHAKGGGALSAVAAT SP+IFIGTGEH+D+FE F+VK FV RL
Sbjct: 240 AFSNAVDVGSVIITKLDGHAKGGGALSAVAATDSPIIFIGTGEHLDDFERFEVKGFVGRL 299
Query: 296 LGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGN-FTLRIMYEQFQNILKMGPIGQVFSML 354
LGMGD +G D I V +D+Q + +++L G FTLR +Y Q Q ++ MG + ++ SML
Sbjct: 300 LGMGDLAGLADSIANAVDIDEQKKTMERLQAGKAFTLRDLYSQLQAVMNMGSMSKMLSML 359
Query: 355 PGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVR 414
PG +P ++ S +IKR++ MMDS+T E+DS+ P + +RIMRI+RGSG
Sbjct: 360 PGMGGSSLPTMSDEASVKRIKRFLVMMDSLTAAEMDSAKP-ITEGTRIMRISRGSGSHPY 418
Query: 415 EVMEMLEEYKRLAKIWSKM--KGLKIPKKGEMSALSRNMNAQHMSKV---LPQGMLKQIG 469
V+E++EE+K++ K+ +M GL + K G+++ + RN Q +SK+ + L ++G
Sbjct: 419 AVIELIEEHKKMQKMLQRMGKTGL-LSKAGDLTNMVRNPQ-QVISKLKASVDHDTLAKMG 476
Query: 470 GVGGLQNLMKQMGSTKDM 487
G ++MK+M ++M
Sbjct: 477 GAENFFSMMKEMEQNEEM 494
>gi|154338231|ref|XP_001565340.1| putative signal recognition particle [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134062389|emb|CAM42250.1| putative signal recognition particle [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 566
Score = 485 bits (1248), Expect = e-134, Method: Compositional matrix adjust.
Identities = 257/487 (52%), Positives = 341/487 (70%), Gaps = 10/487 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LG I +AI +MS +++ E + E +NEI RALLQADV +V+++Q +IK +
Sbjct: 45 MVLAELGQKIGQAIHRMSAKSVLSEDDVKELMNEIARALLQADVNVAIVKKLQVSIKTEL 104
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
L + G NKR+I+Q A+F L ++LDPG F P KGK +V++FVGLQGSGKTT+CTK
Sbjct: 105 ALAEEGVGLNKRKILQNAVFKGLQRILDPGVKPFMPVKGKQNVVLFVGLQGSGKTTSCTK 164
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YA Y Q+KG+K ALVCADTFRAGA+DQL+QNATKAK+ FYGS TE+DPV IA EGV K
Sbjct: 165 YAAYFQRKGFKTALVCADTFRAGAYDQLRQNATKAKVRFYGSLTEADPVAIAREGVAELK 224
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KE DLIIVDTSGRHKQEAALFEEM+QV EA V P+ ++FVM ++ GQA QA FK
Sbjct: 225 KEKYDLIIVDTSGRHKQEAALFEEMKQVEEA-VKPNDIVFVMSATDGQAVEAQASHFKAM 283
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V VG+VIVTK+D KGGGALSAVAAT+SP++FIGTGEH D+F++F + FV ++LGMGD
Sbjct: 284 VPVGSVIVTKLDCQTKGGGALSAVAATRSPIVFIGTGEHFDDFDLFRPERFVQKMLGMGD 343
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G MD + + ++ E+ ++L +G FT+R MYE QN+LKMG +G++ MLPG +
Sbjct: 344 IGGLMDTMRD-ANINGNEEVYKRLQDGLFTMRDMYEHLQNVLKMGSVGKIMEMLPGMAGH 402
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMNDSRIMRIARGSGRQVREVMEM 419
G++ + +K ++ M+DSMT ELD + K+M SR+ RIARGSG V EV +
Sbjct: 403 AGAAGQQGD--IALKGFIHMLDSMTVAELDEAKVKKMMTPSRMHRIARGSGHSVVEVQNL 460
Query: 420 LEEYKRLAKIWSKMKGLKIPKKGEMSA--LSRNMNAQHM---SKVLPQGMLKQIGGVGGL 474
+ Y + +I KM + + S+ S +M Q M +K+L ML+QIGGVGGL
Sbjct: 461 IISYTKFEEIVKKMGKINFKTMMQDSSGPASGHMGQQQMGQLAKLLNPNMLRQIGGVGGL 520
Query: 475 QNLMKQM 481
Q +MKQ+
Sbjct: 521 QGMMKQL 527
>gi|257216394|emb|CAX82402.1| Signal recognition particle 54 kDa protein [Schistosoma japonicum]
Length = 461
Score = 484 bits (1246), Expect = e-134, Method: Compositional matrix adjust.
Identities = 245/440 (55%), Positives = 330/440 (75%), Gaps = 7/440 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LG I+ A++ + NATII+E VLN L EI AL++ADV +LV++++ N++ ++
Sbjct: 1 MVLAELGRKITNALRSLGNATIINEDVLNSLLKEICTALIEADVNIRLVKQLRENVRAVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ D++AAG NKR+IIQ A+F EL ++DP ++ P +G P+VIM VGLQG GKTTT TK
Sbjct: 61 DFDEMAAGLNKRKIIQSAVFKELVHLVDPQVKAWQPARGSPNVIMLVGLQGCGKTTTATK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++Q+KGWK ++CADTFRAGAFDQLKQNATKA+IPFYGSYTE+DPV IA +GV+ F
Sbjct: 121 LAYFYQRKGWKTCMICADTFRAGAFDQLKQNATKARIPFYGSYTETDPVVIARDGVQKFV 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
+E ++IIVDTSGRH+QE +LFEEM QVS A + PD VI+V+D+SIGQA QA AFK
Sbjct: 181 EEKFEIIIVDTSGRHRQEDSLFEEMLQVSNA-IEPDHVIYVLDASIGQACEAQASAFKAK 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V V +VIVTK+DGHAKGGGALSAVAAT SP+ FIGTGEH+++FE F V+PFV +LLG+GD
Sbjct: 240 VDVSSVIVTKLDGHAKGGGALSAVAATHSPITFIGTGEHVEDFEQFRVQPFVQKLLGLGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G ++++ E + +D+ EL++KL +G FTLR MYEQFQNILK+G QV S +PG +
Sbjct: 300 LEGLVERVTE-LKLDENEELVKKLKQGVFTLRNMYEQFQNILKIGSFSQVLSAIPGLGQD 358
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQVREVM 417
L+ ++ES ++KR MT+MDSM + ELDS +L N R +R+ARG+G EV
Sbjct: 359 LL--ANDQESHRRLKRLMTIMDSMNDYELDSDEGGRLFNRQPGRTLRVARGAGVSQAEVK 416
Query: 418 EMLEEYKRLAKIWSKMKGLK 437
+L ++ + + KM G+K
Sbjct: 417 LLLTQHSKFYMVVKKMGGIK 436
>gi|380028787|ref|XP_003698068.1| PREDICTED: uncharacterized protein LOC100872792 [Apis florea]
Length = 1038
Score = 481 bits (1238), Expect = e-133, Method: Compositional matrix adjust.
Identities = 226/365 (61%), Positives = 293/365 (80%), Gaps = 2/365 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNAT+I+E+VLN L EI ALL+ADV +LV++++ N++ ++
Sbjct: 1 MVLADLGRKITSALRSLSNATVINEEVLNSMLKEICAALLEADVNIRLVKKLRENVRLVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ DD+A G NKRR+IQ A+F EL K++DPG ++ P KG+P++IMFVGLQGSGKTTTCTK
Sbjct: 61 DFDDMAGGLNKRRMIQSAVFKELVKLIDPGVKAYQPIKGRPNIIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++ KK WK LVCADTFRAGA+DQ+KQNATKA+IPFYGSYTE DPV IA +GVE FK
Sbjct: 121 LAYHYLKKNWKACLVCADTFRAGAYDQIKQNATKARIPFYGSYTEVDPVTIAQDGVEMFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KE ++IIVDTSGRHKQE +LFEEM QV+ A + PD +IFVMD++IGQA QA+AFK+
Sbjct: 181 KEGYEIIIVDTSGRHKQEESLFEEMLQVANA-IQPDNIIFVMDATIGQACEAQAKAFKER 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V+VG++I+TK+DGHAKGGGALSAVAAT+SPVIF+GTGEH+D+ E F KPF+S+LLGMGD
Sbjct: 240 VNVGSIIITKLDGHAKGGGALSAVAATQSPVIFVGTGEHIDDLEPFKTKPFISKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G +DK++E + +D ELL+K+ G FTLR MYEQFQN++KMGP Q+ + L F+S
Sbjct: 300 IEGLIDKVNE-LNLDDNEELLEKIKHGQFTLRDMYEQFQNVMKMGPFSQLMASLIFFASL 358
Query: 361 LMPKG 365
K
Sbjct: 359 FYSKS 363
>gi|213408098|ref|XP_002174820.1| signal recognition particle protein [Schizosaccharomyces japonicus
yFS275]
gi|212002867|gb|EEB08527.1| signal recognition particle protein [Schizosaccharomyces japonicus
yFS275]
Length = 537
Score = 479 bits (1232), Expect = e-132, Method: Compositional matrix adjust.
Identities = 240/484 (49%), Positives = 340/484 (70%), Gaps = 29/484 (5%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MV + LG ++ A+ ++S + +++++V++ L I +ALL++DV +LV+E++ NIKK +
Sbjct: 1 MVFSDLGRRLNAALGELSKSDVVNDEVVDGVLKSICKALLESDVNVRLVQELRGNIKKRI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N+ L AG N +R++Q+A+F+ELC +LDP +FTPKKG+P+VIMFVGLQGSGKTTTCTK
Sbjct: 61 NVKSLPAGPNGKRVVQKAVFDELCDLLDPKTQAFTPKKGRPNVIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A Y+Q++G+K LV ADTFRAGAFDQLKQNA KA+IPFYGSYTE+DPV +A GV+ FK
Sbjct: 121 LALYYQRRGFKSCLVAADTFRAGAFDQLKQNALKARIPFYGSYTEADPVVVAQTGVDKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KE D+IIVDTSGRH+QE LF EM ++SEA V P+ I V+D+SIGQAA Q++AFK+S
Sbjct: 181 KERFDIIIVDTSGRHQQEKELFNEMIEISEA-VRPNQTIMVLDASIGQAAESQSRAFKES 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
+ GAVIVTK+DGHAKGGGALSAVAATK+P+IFIGTGEH+++ E F + F+S+LLGMGD
Sbjct: 240 ANFGAVIVTKLDGHAKGGGALSAVAATKTPIIFIGTGEHINDLERFSPRSFISKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G ++ + + +D+Q +++ L +G FT+R +Q NI+K+GP+ ++ SM+PG +
Sbjct: 300 IEGLLEHVQS-LGLDKQQNMVKNLEQGKFTVRDFRDQLSNIMKLGPLSKMASMIPGM-GD 357
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEM 419
+M + E ++KR + ++DSMT +EL+S +RIMR+ARGSG V EV E
Sbjct: 358 MMNGMDDAEGSMRMKRMLFIVDSMTEQELNSDGLIFKEQPTRIMRVARGSGTSVLEVEET 417
Query: 420 LEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQIGGVGGLQNLMK 479
L + + A++ KM G G+L Q+GG GGL+ K
Sbjct: 418 LSQVRVFAQMAKKMGG-------------------------KDGILNQMGGAGGLKKDPK 452
Query: 480 QMGS 483
Q+ +
Sbjct: 453 QIAA 456
>gi|401422796|ref|XP_003875885.1| putative signal recognition particle [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322492125|emb|CBZ27399.1| putative signal recognition particle [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 519
Score = 478 bits (1231), Expect = e-132, Method: Compositional matrix adjust.
Identities = 253/476 (53%), Positives = 336/476 (70%), Gaps = 14/476 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LG I +AI +MS +++ E + E +NEI RALLQADV +V+++Q +IK +
Sbjct: 1 MVLAELGQKIGQAIHRMSAKSMLGEDDVKELMNEIARALLQADVNVTIVKKLQVSIKTEL 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
L + AG NKR+I+Q A+FN L ++LDPG F P KGK +V+MFVGLQGSGKTT+CTK
Sbjct: 61 ALAEEGAGLNKRKILQNAVFNGLKRILDPGVKPFIPVKGKQNVVMFVGLQGSGKTTSCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YA Y Q+KG+K ALVCADTFRAGA+DQL+QNATKAK+ FYGS TE+DPV IA EGV K
Sbjct: 121 YAAYFQRKGFKAALVCADTFRAGAYDQLRQNATKAKVRFYGSLTEADPVAIAKEGVAELK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KE DLIIVDTSGRHKQE+ALFEEM+QV EA V P+ ++FVM ++ GQA +QA+ FK+
Sbjct: 181 KEKYDLIIVDTSGRHKQESALFEEMKQVEEA-VKPNDIVFVMSATDGQAVEEQARNFKEM 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V+VG+VIVTK+D KGGGALSAVAAT+SP++FIGTGEH ++F++F+ + FV ++LGMGD
Sbjct: 240 VAVGSVIVTKLDCQTKGGGALSAVAATRSPIVFIGTGEHFEDFDLFNPERFVQKMLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G MD + + +D E+ ++L +G FT+R MYE QN+LKMG +G++ MLPG S
Sbjct: 300 IGGLMDTMRD-ANIDGNEEVYKRLQDGLFTMRDMYEHLQNVLKMGSVGKIMEMLPGMSGH 358
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMNDSRIMRIARGSGRQVREVMEM 419
G++ + +K ++ M+DSMT ELD + K+M SR+ RIARGSG V EV +
Sbjct: 359 AATAGQQGD--IALKGFIHMLDSMTVAELDEAKVKKMMTPSRMHRIARGSGHSVVEVQNL 416
Query: 420 LEEYKRLAKIWSKMKGLKIPKKGEMSALS----RNMNAQHM---SKVLPQGMLKQI 468
+ Y + +I KM KI K M S +M Q M +K+L ML+QI
Sbjct: 417 IISYTKFEEIVKKMG--KINFKAMMQDSSGPAAGHMGQQQMGQLAKLLNPNMLRQI 470
>gi|300123716|emb|CBK24988.2| unnamed protein product [Blastocystis hominis]
Length = 521
Score = 476 bits (1226), Expect = e-132, Method: Compositional matrix adjust.
Identities = 244/497 (49%), Positives = 347/497 (69%), Gaps = 9/497 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LG ++ A+ ++ + IID+ V+NE + EI+ ALL +DV K+V +++ IK V
Sbjct: 1 MVLAELGKGLTSALSKLQTSVIIDDNVVNEVIKEISNALLHSDVNLKIVMKLRETIKNRV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGK-PSFTPKKGKPSVIMFVGLQGSGKTTTCT 119
++ AAG NK R+IQ+A++ EL ML P + F P +G+ +VIMFVGLQGSGKTTT
Sbjct: 61 TIECQAAGVNKHRVIQRAVYEELVNMLSPVEVQPFKPVRGRSNVIMFVGLQGSGKTTTIG 120
Query: 120 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
K+A Y+++KGW+ +VCADTFRAGAFDQLKQNA K K+PFYGSYTESDPV IA +GV F
Sbjct: 121 KFAAYYKRKGWRTCMVCADTFRAGAFDQLKQNAVKVKVPFYGSYTESDPVVIAEQGVSQF 180
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQ 239
KKE+ ++IIVDTSGRHKQE LFEEM+QV ++ ++PD ++FV+DS+IGQAAFDQAQAF++
Sbjct: 181 KKEHFEIIIVDTSGRHKQEEGLFEEMKQV-QSHIHPDNIVFVLDSTIGQAAFDQAQAFQR 239
Query: 240 SVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMG 299
+V +G+VI+TK+DG+AKGGGALSAVAAT +P+IF G+GE D+ E F+ FVSRLLGMG
Sbjct: 240 TVDIGSVIITKLDGNAKGGGALSAVAATGAPIIFTGSGEGFDDLEPFEASSFVSRLLGMG 299
Query: 300 DWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSS 359
D G + ++ E + + ++++ +G FT+R M EQ QN+ K+GP+ +V SM+PG
Sbjct: 300 DVKGLVREMKEGGMLKVNEDTMKRIQKGKFTIRDMGEQLQNVAKLGPLDRVMSMIPGLPQ 359
Query: 360 ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEM 419
++P+G EKE ++KR M +M+SMT+ ELD M++ R+ R G+G E
Sbjct: 360 GMLPQGMEKEGGERMKRMMILMNSMTDAELDGEVE--MDEKRLRRCCIGAGLLPEEGAMF 417
Query: 420 LEEYKRLAKIWSKMKGLKIPKKGEM-SALSRNMNA--QHMSKVLPQGMLKQIGGVGGLQN 476
+++YK + ++ KM + + +M + RN A Q + K + ML Q+GG L +
Sbjct: 418 MQQYKAMEQMIGKMGKSPLMRDEKMLQQMQRNPQAVMQQLQKTMNPQMLAQMGGAKNLMS 477
Query: 477 LMKQ--MGSTKDMMGMF 491
+MK M + K MMG F
Sbjct: 478 MMKNIDMNAMKKMMGQF 494
>gi|24473790|gb|AAL55410.1| SRP54-like protein [Leishmania major]
Length = 487
Score = 476 bits (1224), Expect = e-131, Method: Compositional matrix adjust.
Identities = 247/474 (52%), Positives = 335/474 (70%), Gaps = 10/474 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LG I +AI +MS +++ E + E +NEI RALLQADV +V+++Q +I+ +
Sbjct: 1 MVLAELGQKIGQAIHRMSAKSMLGEDDVKELMNEIARALLQADVNVTIVKKLQVSIRTEL 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
L + AG NKR+I+Q A+FN L ++LDPG F P KG+ +V+MFVGLQGSGKTT+CTK
Sbjct: 61 ALAEEGAGLNKRKILQNAVFNGLKRILDPGVKPFLPVKGRHNVVMFVGLQGSGKTTSCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YA Y Q+KG+K ALVCADTFRAGA+DQL+QNATKAK+ FYGS TE+DPV IA EGV K
Sbjct: 121 YAAYFQRKGFKTALVCADTFRAGAYDQLRQNATKAKVRFYGSLTEADPVAIAKEGVAELK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KE DLIIVDTSGRHKQE+ALFEEM+QV EA V P+ ++FVM ++ GQA +QA+ FK+
Sbjct: 181 KEKYDLIIVDTSGRHKQESALFEEMKQVEEA-VKPNDIVFVMSATDGQAVEEQARNFKEM 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V+VG+VIVTK+D KGGGALSAVAAT+SP++FIGTGEH ++F++F+ + FV ++LGMGD
Sbjct: 240 VAVGSVIVTKLDCQTKGGGALSAVAATRSPIVFIGTGEHFEDFDLFNPERFVQKMLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G MD + + +D E+ ++L +G FT+R MYE QN+LKMG +G++ MLPG S
Sbjct: 300 IGGLMDTMRD-ANIDGNEEVYKRLQDGLFTMRDMYEHLQNVLKMGSVGKIMEMLPGMSGH 358
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMNDSRIMRIARGSGRQVREVMEM 419
G++ + +K ++ M+DSMT ELD K+M SR+ RIARGSG V EV +
Sbjct: 359 AATAGQQGD--IALKGFIHMLDSMTVAELDEVRVKKMMTPSRMHRIARGSGHSVVEVQNL 416
Query: 420 LEEYKRLAKIWSKMKGLKIPKKGEMSA--LSRNMNAQHM---SKVLPQGMLKQI 468
+ Y + +I KM + + S+ + +M Q M +K+L ML+QI
Sbjct: 417 IISYTKFEEIVKKMGKMNFKAMMQDSSGPAAGHMGQQQMGQLAKLLNPNMLRQI 470
>gi|358060767|dbj|GAA93538.1| hypothetical protein E5Q_00182 [Mixia osmundae IAM 14324]
Length = 523
Score = 475 bits (1223), Expect = e-131, Method: Compositional matrix adjust.
Identities = 259/526 (49%), Positives = 355/526 (67%), Gaps = 36/526 (6%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A+ Q+S A++IDE+VL+ L EI AL +ADV KLV ++ +K V
Sbjct: 1 MVLADLGKRINGALSQLSAASVIDEQVLDSILKEIATALFEADVNVKLVANLRNKVKTKV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPS---FTPKKGKPSVIMFVGLQGSGKTTT 117
L + NK+ +IQ+A+F+EL +++DPG + FTPKKG+ +VIMFVGLQG+GKTT+
Sbjct: 61 -APALGSSGNKKSVIQRAVFDELVQLVDPGPEAAAPFTPKKGQSNVIMFVGLQGAGKTTS 119
Query: 118 CTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVE 177
CTK A +++++G+K LVCADTFRAGAFDQLKQNATKAKIPFYGSYTE+DPV I+ +GV
Sbjct: 120 CTKLAIHYKRRGYKTCLVCADTFRAGAFDQLKQNATKAKIPFYGSYTETDPVVISAQGVH 179
Query: 178 TFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAF 237
F++E D+IIVDTSGRH+QE LFEEM Q+S V PD I V+D +IGQAA Q++AF
Sbjct: 180 KFREERFDIIIVDTSGRHRQETELFEEMMQISR-QVKPDQTIMVLDGAIGQAAESQSRAF 238
Query: 238 KQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLG 297
K++ GA+IVTKMDGHAKGGGA+SAVAATK+P+IFIGTGEH+ + E F +PF+S++LG
Sbjct: 239 KEAADFGAIIVTKMDGHAKGGGAISAVAATKTPIIFIGTGEHLHDLEKFSPEPFISKMLG 298
Query: 298 MGDWSGFMDKIHEVVPM--DQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLP 355
MGD G M+ + EV +Q+ E+L+KL G FT+R + +Q NI+ MGP+ ++ M+P
Sbjct: 299 MGDMQGLMETVQEVHQNNPNQRAEMLKKLEAGVFTVRDLKDQMSNIMSMGPLSKIAQMIP 358
Query: 356 GFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDS--------------- 400
G L + E S IKR M + D+MT EEL+S KL + S
Sbjct: 359 GMGDMLGGENSEAASHT-IKRMMYIFDAMTAEELESDG-KLFHTSPTNTEYREGQLREPN 416
Query: 401 -RIMRIARGSGRQVREVMEMLEEYKRLAKIWSKM--KGLKIPKKGEM----SAL--SRNM 451
R++RIARGSG V+E +L +++ A++ K KG + K +M AL R
Sbjct: 417 KRVLRIARGSGTSVQECEGLLAQHRMFAEMAKKAGGKGGWMQKAKQMQQGGGALPQGRMP 476
Query: 452 NAQHMSKVLPQGMLKQIGGVGGLQNLMKQMGST---KDMMGMFGGG 494
+ +S++LP GM +Q+ +GG + +MKQMG ++MM GGG
Sbjct: 477 SMDQLSRMLPAGMAEQVRAMGGPEAMMKQMGGMAGLQNMMKGMGGG 522
>gi|328772629|gb|EGF82667.1| hypothetical protein BATDEDRAFT_86146 [Batrachochytrium
dendrobatidis JAM81]
Length = 565
Score = 475 bits (1223), Expect = e-131, Method: Compositional matrix adjust.
Identities = 237/454 (52%), Positives = 337/454 (74%), Gaps = 21/454 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LG I+ A++ ++ AT+IDE+ L L EI ALL++DV +LV+ ++ NIK IV
Sbjct: 1 MVLAELGKRINTALKTLTTATVIDEEALEAILKEICGALLESDVNVRLVQSLRKNIKSIV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGK--PSFTPKKGKPSVIMFVGLQGSGKTTTC 118
NL +L++G NK+RIIQ+AIF+ELCK++DPG+ +F P+KGKP+VIMFVGLQGSGKTTTC
Sbjct: 61 NLQELSSGINKKRIIQKAIFDELCKLVDPGQGVVAFKPRKGKPNVIMFVGLQGSGKTTTC 120
Query: 119 TKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVET 178
TK AYY+Q+KG++ LVC DTFRAGAFDQLKQNATKAKIP+YGSYTESDPV++A+EGV+
Sbjct: 121 TKMAYYYQRKGYRTCLVCTDTFRAGAFDQLKQNATKAKIPYYGSYTESDPVQLAMEGVDK 180
Query: 179 FKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFK 238
FK E ++IIVDTSGRH+QE LF+EM+Q+S + PD V+FV+D +IGQAA A+AF+
Sbjct: 181 FKVEGFEVIIVDTSGRHRQETELFQEMQQISN-VIKPDNVVFVLDGTIGQAADAHARAFQ 239
Query: 239 QSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLG- 297
++V +G++++TKMDGHAKGGGA+SAVAAT SP++FIGTGEH+ + E+F + FV ++LG
Sbjct: 240 ETVDIGSIVITKMDGHAKGGGAISAVAATGSPILFIGTGEHIHDLEIFKSQSFVRKMLGS 299
Query: 298 ------------MGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMG 345
MGD G M+ + ++ + +L++ + +G FTLR M +QF+ + MG
Sbjct: 300 QLLAIDIASKKSMGDIDGLMETVQDMKL--ENTDLMKNIEQGKFTLRSMKQQFELVTSMG 357
Query: 346 PIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMN--DSRIM 403
PI ++ SM+PG E++ + ++ IKR+M + DSMT ELD S+ K+ N +RI
Sbjct: 358 PISKLASMIPGMPQEMLAQMDGQDGPGLIKRFMCIFDSMTETELD-SDGKVFNVHPTRIY 416
Query: 404 RIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLK 437
R+A+GSG V+E+ +L ++K++A + + G K
Sbjct: 417 RVAKGSGVTVQEIETLLVQFKQMAGMIKSIGGSK 450
>gi|157870075|ref|XP_001683588.1| putative signal recognition particle [Leishmania major strain
Friedlin]
gi|68126654|emb|CAJ04436.1| putative signal recognition particle [Leishmania major strain
Friedlin]
Length = 519
Score = 474 bits (1220), Expect = e-131, Method: Compositional matrix adjust.
Identities = 247/474 (52%), Positives = 335/474 (70%), Gaps = 10/474 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LG I +AI +MS +++ E + E +NEI RALLQADV +V+++Q +I+ +
Sbjct: 1 MVLAELGQKIGQAIHRMSAKSMLGEDDVKELMNEIARALLQADVNVTIVKKLQVSIRTEL 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
L + AG NKR+I+Q A+FN L ++LDPG F P KG+ +V+MFVGLQGSGKTT+CTK
Sbjct: 61 ALAEEGAGLNKRKILQNAVFNGLKRILDPGVKPFLPVKGRHNVVMFVGLQGSGKTTSCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YA Y Q+KG+K ALVCADTFRAGA+DQL+QNATKAK+ FYGS TE+DPV IA EGV K
Sbjct: 121 YAAYFQRKGFKTALVCADTFRAGAYDQLRQNATKAKVRFYGSLTEADPVAIAKEGVAELK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KE DLIIVDTSGRHKQE+ALFEEM+QV EA V P+ ++FVM ++ GQA +QA+ FK+
Sbjct: 181 KEKYDLIIVDTSGRHKQESALFEEMKQVEEA-VKPNDIVFVMSATDGQAVEEQARNFKEM 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V+VG+VIVTK+D KGGGALSAVAAT+SP++FIGTGEH ++F++F+ + FV ++LGMGD
Sbjct: 240 VAVGSVIVTKLDCQTKGGGALSAVAATRSPIVFIGTGEHFEDFDLFNPERFVQKMLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G MD + + +D E+ ++L +G FT+R MYE QN+LKMG +G++ MLPG S
Sbjct: 300 IGGLMDTMRD-ANIDGNEEVYKRLQDGLFTMRDMYEHLQNVLKMGSVGKIMEMLPGMSGH 358
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMNDSRIMRIARGSGRQVREVMEM 419
G++ + +K ++ M+DSMT ELD K+M SR+ RIARGSG V EV +
Sbjct: 359 AATAGQQGD--IALKGFIHMLDSMTVAELDEVRVKKMMTPSRMHRIARGSGHSVVEVQNL 416
Query: 420 LEEYKRLAKIWSKMKGLKIPKKGEMSA--LSRNMNAQHM---SKVLPQGMLKQI 468
+ Y + +I KM + + S+ + +M Q M +K+L ML+QI
Sbjct: 417 IISYTKFEEIVKKMGKMNFKAMMQDSSGPAAGHMGQQQMGQLAKLLNPNMLRQI 470
>gi|71651473|ref|XP_814414.1| signal recognition particle [Trypanosoma cruzi strain CL Brener]
gi|70879383|gb|EAN92563.1| signal recognition particle, putative [Trypanosoma cruzi]
Length = 487
Score = 473 bits (1216), Expect = e-130, Method: Compositional matrix adjust.
Identities = 240/462 (51%), Positives = 321/462 (69%), Gaps = 7/462 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LG I AI +MS+ ++ E + E LNE+ RALLQADV V+E+Q I+ V
Sbjct: 1 MVLAELGQKIGGAISKMSSKPLLGEDDVKEFLNEVARALLQADVHVTTVKELQQTIRAEV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ A G NKR+++Q A+F+ L K+LDPG F P KGK +++MFVGLQGSGKTT+CTK
Sbjct: 61 AITSEAVGLNKRKMLQTAVFSGLRKILDPGVKPFIPAKGKTNIVMFVGLQGSGKTTSCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YA Y Q+KG K ALVCADTFRAGA+DQL+QNATKAKI FYGS TE+DPV IA EGV +
Sbjct: 121 YAAYFQRKGLKTALVCADTFRAGAYDQLRQNATKAKIRFYGSLTEADPVIIAKEGVAELE 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KE DLII+DTSGRHKQE+ALFEEM+QV EA V P+ ++FVM ++ GQ +QA+ FK+
Sbjct: 181 KEKYDLIIIDTSGRHKQESALFEEMKQVQEA-VKPNDIVFVMSATDGQGIREQARQFKEK 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V VG+VI+TK+DGHAKGGGAL+AVA TKSP++FIGTGEH ++FE+F + FVSR+LGMGD
Sbjct: 240 VPVGSVIITKLDGHAKGGGALAAVAMTKSPIVFIGTGEHFEDFELFQPESFVSRMLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
MD + + +D EL ++ +G FT+R MYE QN+LKMG + ++ +M+PG S+
Sbjct: 300 MRALMDTMKD-ANIDTDSELYRRFQDGQFTMRDMYEHLQNVLKMGSVSKIMNMIPGMSA- 357
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMNDSRIMRIARGSGRQVREVMEM 419
+ + +K ++ +MDSMT ELD + K M SRI+R+ARGSG + EV +
Sbjct: 358 -LSGAAGELGDVTLKAFIHIMDSMTAAELDDARVKKTMTPSRILRVARGSGHSIHEVHNL 416
Query: 420 LEEYKRLAKIWSKMK--GLKIPKKGEMSALSRNMNAQHMSKV 459
+ Y + ++ KM K + S LS M Q M+++
Sbjct: 417 ITSYTKFEEVVKKMGKMNFKAMSQDPGSMLSGRMGQQQMTQL 458
>gi|326519590|dbj|BAK00168.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 341
Score = 473 bits (1216), Expect = e-130, Method: Compositional matrix adjust.
Identities = 235/337 (69%), Positives = 282/337 (83%), Gaps = 8/337 (2%)
Query: 158 PFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDL 217
P Y +TE DPV+IAVEG+E F++E DLII+DTSGRH QEAALFEEMRQV+EAT PDL
Sbjct: 7 PRY-PFTE-DPVKIAVEGLEKFRQEKSDLIIIDTSGRHMQEAALFEEMRQVAEAT-KPDL 63
Query: 218 VIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTG 277
VIFVMD SIGQAAFDQAQAFKQS SVGAVIVTK+DGHAKGGGALSAVAATKSPVIFIGTG
Sbjct: 64 VIFVMDGSIGQAAFDQAQAFKQSASVGAVIVTKLDGHAKGGGALSAVAATKSPVIFIGTG 123
Query: 278 EHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQ 337
EH+D+F+VF+V+PFV+RLLG GD G +DK+ +VP DQQ EL+ KLSEG FTLR++YEQ
Sbjct: 124 EHIDDFDVFNVEPFVARLLGRGDLPGLIDKMESIVPADQQSELVAKLSEGAFTLRLLYEQ 183
Query: 338 FQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLM 397
FQN+LKMGP+ Q+FSMLPGFSSELMPKG+EK+S+ K KRYMT+MDSMT ELDS+NPKLM
Sbjct: 184 FQNLLKMGPMSQIFSMLPGFSSELMPKGQEKQSKEKFKRYMTIMDSMTPAELDSTNPKLM 243
Query: 398 NDSRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNAQHM 456
+SR +R+ARGSGR++++VMEMLEEYKRLAK+WSK+ K IP G+MSA + Q M
Sbjct: 244 TESRTIRVARGSGRKLKDVMEMLEEYKRLAKMWSKLNVSKLIPPNGKMSAQA----IQKM 299
Query: 457 SKVLPQGMLKQIGGVGGLQNLMKQMGSTKDMMGMFGG 493
KV+P +++Q+GG GL+ L+KQ+G KD M G
Sbjct: 300 LKVMPPQVVQQMGGKSGLEALLKQLGGGKDTSKMLAG 336
>gi|330802872|ref|XP_003289436.1| signal recognition particle 54 kDa subunit [Dictyostelium
purpureum]
gi|325080478|gb|EGC34032.1| signal recognition particle 54 kDa subunit [Dictyostelium
purpureum]
Length = 516
Score = 471 bits (1213), Expect = e-130, Method: Compositional matrix adjust.
Identities = 253/506 (50%), Positives = 354/506 (69%), Gaps = 40/506 (7%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LG +S A++ ++ +TI++E +N L EI AL ++DV L+ +M+ NIK+ V
Sbjct: 1 MVLAELGNQLSAALRNLNESTIVNEDTINTLLKEIGNALSKSDVSMSLIIQMRKNIKEKV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
LD +AAG NKR+II++ +F EL +++DPG P + P KGK +V+MFVGLQG+GKTT+ TK
Sbjct: 61 KLDQIAAGLNKRKIIRKVVFEELIRLVDPGVPLWKPVKGKSNVVMFVGLQGAGKTTSVTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY++KKGW A+VCADTFRAGAFDQ++ NA K KI +YGS TE DPV +A GV+ FK
Sbjct: 121 LAYYYKKKGWSTAIVCADTFRAGAFDQVRHNAAKGKIQYYGSDTEKDPVVVAKAGVDIFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KE ++IIVDTSGRHKQ++ LFEEM+Q+ E V PD VIFVMDSSIGQAA++QA AFK S
Sbjct: 181 KEGTEIIIVDTSGRHKQDSELFEEMKQI-ETAVKPDNVIFVMDSSIGQAAYEQATAFKNS 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V VG++I+TKMDG++KGGGALS +AAT SP+IFIGTGEH+ + ++FD + FV++LLG GD
Sbjct: 240 VKVGSIIITKMDGNSKGGGALSGIAATGSPIIFIGTGEHLTDLDLFDPETFVNKLLGNGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G ++KI EV+P D L+++++G FTLR M +QFQ IL++GPI + M+PG S
Sbjct: 300 IKGMLEKIKEVIPEDSSS--LKEIAQGKFTLRSMQQQFQQILQLGPIDKFVQMIPGMSQ- 356
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEML 420
MP+ + E K+K Y+ ++DS++++ELD P + RI+ IA+G+GR +EV+E+L
Sbjct: 357 -MPQLQGNEGNLKLKAYINILDSLSDKELDGKKP--ITQKRILAIAQGAGRHPKEVLELL 413
Query: 421 EEYKRLAKIWSKMKGLKIPKK-GEMSALSRNMNAQHMSKVLPQGMLKQI----------- 468
E++ K++ K+ G K+P G M L +SK P+G L+Q+
Sbjct: 414 EQH----KMFEKLIGGKVPGGMGNMGNL--------LSKGGPKG-LQQLQNMMPPQMMKQ 460
Query: 469 ----GGVGGLQNLMKQMGSTKDMMGM 490
GG+ GL N K M DM G+
Sbjct: 461 MNAAGGMQGLLNSFKNM----DMSGL 482
>gi|407860349|gb|EKG07361.1| signal recognition particle, putative [Trypanosoma cruzi]
Length = 578
Score = 470 bits (1210), Expect = e-130, Method: Compositional matrix adjust.
Identities = 242/462 (52%), Positives = 321/462 (69%), Gaps = 7/462 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LG I AI +MS+ ++ E + E LNE+ RALLQADV V+E+Q I+ V
Sbjct: 92 MVLAELGQKIGGAISKMSSKPLLGEDDVKEFLNEVARALLQADVHVTTVKELQQTIRAEV 151
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ A G NKR+++Q A+F+ L K+LDPG F P KGK +++MFVGLQGSGKTT+CTK
Sbjct: 152 AITSEAVGLNKRKMLQSAVFSGLKKILDPGVKPFIPAKGKNNIVMFVGLQGSGKTTSCTK 211
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YA Y Q+KG K ALVCADTFRAGA+DQL+QNATKAKI FYGS TE+DPV IA EGV +
Sbjct: 212 YAAYFQRKGLKTALVCADTFRAGAYDQLRQNATKAKIRFYGSLTEADPVIIAKEGVAELE 271
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KE DLII+DTSGRHKQE+ALFEEM+QV EA V P+ ++FVM ++ GQ +QA+ FK+
Sbjct: 272 KEKYDLIIIDTSGRHKQESALFEEMKQVQEA-VKPNDIVFVMSATDGQGIREQARQFKEK 330
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V VG+VIVTK+DGHAKGGGAL+AVA TKSP++FIGTGEH ++FE+F + FVSR+LGMGD
Sbjct: 331 VPVGSVIVTKLDGHAKGGGALAAVAMTKSPIVFIGTGEHFEDFELFQPESFVSRMLGMGD 390
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
MD + + +D EL ++ +G FT+R MYE QN+LKMG + ++ +M+PG S+
Sbjct: 391 MRALMDTMKD-ANIDTDSELYRRFQDGQFTMRDMYEHLQNVLKMGSVSKIMNMIPGMSAL 449
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMNDSRIMRIARGSGRQVREVMEM 419
G + +K ++ +MDSMT ELD + K M SRI+R+ARGSG + EV +
Sbjct: 450 SGAAG--ELGDVALKAFIHIMDSMTAAELDDARVKKTMTPSRILRVARGSGHSIHEVHNL 507
Query: 420 LEEYKRLAKIWSKMK--GLKIPKKGEMSALSRNMNAQHMSKV 459
+ Y + ++ KM K + S LS M Q M+++
Sbjct: 508 ITSYTKFEEVVKKMGKMNFKAMSQDPGSMLSGRMGQQQMTQL 549
>gi|392595811|gb|EIW85134.1| signal recognition particle protein [Coniophora puteana RWD-64-598
SS2]
Length = 571
Score = 469 bits (1208), Expect = e-129, Method: Compositional matrix adjust.
Identities = 243/514 (47%), Positives = 345/514 (67%), Gaps = 35/514 (6%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG ++ A+ ++ A ++DEKVL+ L EIT ALL++DV KLV +++ +K V
Sbjct: 1 MVLADLGRKLNAALSSLNRAPVVDEKVLDATLKEITAALLESDVNVKLVASLRSKVKVKV 60
Query: 61 NLD----DLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTT 116
D A ++ IIQ+A+F+EL ++DPG + PKKG+ +VIM VGLQG+GKTT
Sbjct: 61 KASLESADKAKDVARKNIIQKAVFDELVHLVDPGVEPYKPKKGQTNVIMAVGLQGNGKTT 120
Query: 117 TCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGV 176
TCTK A Y+QK+G+K +VCADTFRAGAFDQ +Q+ATKAK+ ++GSYTE+DPV IA +GV
Sbjct: 121 TCTKLAVYYQKRGFKSCIVCADTFRAGAFDQTRQSATKAKVAYFGSYTETDPVAIAAQGV 180
Query: 177 ETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQA 236
FKKE D+IIVDTSGRHKQE+ LF+EM Q+SEA VNP++ + V+D+SIGQAA Q+QA
Sbjct: 181 TKFKKERFDVIIVDTSGRHKQESELFQEMVQISEA-VNPNMTVLVLDASIGQAAEAQSQA 239
Query: 237 FKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLL 296
FK+S GA+IVTKMDGHAKGGGA+SAVAAT++P+IF+G GEH+ + + F +PF+S+LL
Sbjct: 240 FKESADFGAIIVTKMDGHAKGGGAISAVAATQTPIIFLGVGEHLYDLDKFSPQPFISKLL 299
Query: 297 GMGDWSGFMDKIHEVVPM--DQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSML 354
G+GD G M+ +H++ D+Q ++ +KL EG ++R EQ QN++ MGPI ++ SM+
Sbjct: 300 GLGDMQGLMEHMHDLAMQNPDKQKDMAKKLEEGKLSIRDWREQIQNVMNMGPISKIASMI 359
Query: 355 PGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDS----------RIMR 404
PG EL+ G ++E ++KR + + DSMT EELDS M + R+ R
Sbjct: 360 PGLPQELLA-GSDEEGSLRMKRMIYITDSMTAEELDSDGSMFMEMAKDGKPIGLTWRVTR 418
Query: 405 IARGSGRQVREVMEMLEEYKRLAKI---------W----SKMKGLKIPKKGEMSALSRNM 451
+ARGSG VREV E+L +Y+ +A + W KM+ + + +
Sbjct: 419 VARGSGTSVREVEELLCQYRMMANMAKQAGGKNGWLQAVQKMQQAGGGRGRGANGMPTPA 478
Query: 452 NAQHMSKVLPQGML----KQIGGVGGLQNLMKQM 481
Q M + +P GM+ +Q+ GLQ++M+ M
Sbjct: 479 QIQAMQRAMPPGMMQQMQRQLRSGNGLQDMMRTM 512
>gi|157115970|ref|XP_001652739.1| signal recognition particle 54 kda protein [Aedes aegypti]
gi|108876679|gb|EAT40904.1| AAEL007400-PA [Aedes aegypti]
Length = 357
Score = 469 bits (1207), Expect = e-129, Method: Compositional matrix adjust.
Identities = 221/350 (63%), Positives = 280/350 (80%), Gaps = 2/350 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A+ +S ATII+E+VL+ L EI ALL+ADV +LV++++ N+K ++
Sbjct: 1 MVLADLGRKITNALHSLSKATIINEEVLDSMLKEICTALLEADVNIRLVKKLRENVKSVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ D++A G NKRR+IQ A+F EL K++DPG + P KG+P+VIMFVGLQGSGKTTTCTK
Sbjct: 61 DFDEMAGGLNKRRMIQSAVFKELVKLVDPGVKPYQPVKGRPNVIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++QKK WK LVCADTFRAGA+DQ+KQNATKA+IPFYGSYTE DPV IA +GV+ FK
Sbjct: 121 LAYHYQKKNWKSCLVCADTFRAGAYDQIKQNATKARIPFYGSYTEVDPVVIAQDGVDMFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KE + IIVDTSGRHKQE +LFEEM V+ A V PD +IFVMD++IGQA QA+AFK+
Sbjct: 181 KEGFEFIIVDTSGRHKQEESLFEEMLAVATA-VKPDNIIFVMDATIGQACEAQAKAFKEK 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V +G+VI+TK+DGHAKGGGALSAVAAT SP+IFIGTGEH+D+ E F KPF+S+LLGMGD
Sbjct: 240 VDIGSVIITKLDGHAKGGGALSAVAATNSPIIFIGTGEHIDDLEPFKTKPFISKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQV 350
G +DK++E + +D EL+ K+ G FT+R MYEQFQNI+KMGP Q+
Sbjct: 300 IEGLIDKVNE-LNLDDNEELIDKIKHGQFTIRDMYEQFQNIMKMGPFSQI 348
>gi|345569889|gb|EGX52715.1| hypothetical protein AOL_s00007g498 [Arthrobotrys oligospora ATCC
24927]
Length = 511
Score = 469 bits (1207), Expect = e-129, Method: Compositional matrix adjust.
Identities = 229/436 (52%), Positives = 322/436 (73%), Gaps = 5/436 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A+Q ++ + ++DEK + + EI AL++ADV KLV ++ +I++ V
Sbjct: 1 MVLADLGRRINSAVQDLTRSNLVDEKAFDSMIKEIGNALVEADVNVKLVANLRKSIRQTV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N DL G NK+RIIQ+A+F+ELC+++D + PKKGK +VIMFVGLQGSGKTTTCTK
Sbjct: 61 NFKDLGQGVNKKRIIQKAVFDELCRLVDSHSEPYKPKKGKTNVIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++ +G+K LVCADTFRAGAFDQLKQNATKAK+P+YGSYTE+DPV++A GV+ FK
Sbjct: 121 LARWYNARGFKACLVCADTFRAGAFDQLKQNATKAKVPYYGSYTETDPVKVAKAGVDKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KE ++IIVDTSGRH+QE LF EM Q+ EA V PD I V+D+SIGQ A Q++AFK+S
Sbjct: 181 KERFEIIIVDTSGRHRQETELFAEMVQIQEA-VRPDQTIMVLDASIGQQAEAQSKAFKES 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
GA+++TK DG+A GGGA+SAVAATK+P++FIGTGEH+ + E F+ + ++S+LLGMGD
Sbjct: 240 ADFGAIVITKTDGNAAGGGAISAVAATKTPIVFIGTGEHILDMEKFEPQRYISKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G ++ + + +DQ+ + ++ ++EG FT+R + +Q NI+KMGP+ ++ M+PG S+
Sbjct: 300 MQGLVEHVQS-LKLDQK-DTMKHIAEGLFTVRDLRDQLNNIMKMGPLSKMAGMIPGLSN- 356
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEM 419
LM ++E K+KR M +MDSMT +ELDS + R+ RIARGSG VREV ++
Sbjct: 357 LMGDVGDEEGSMKLKRMMYIMDSMTTKELDSDGKVFVQQPERMTRIARGSGTSVREVEDV 416
Query: 420 LEEYKRLAKIWSKMKG 435
L ++K +A++ KMKG
Sbjct: 417 LTQHKMMAQMAKKMKG 432
>gi|393245418|gb|EJD52928.1| signal recognition particle protein [Auricularia delicata TFB-10046
SS5]
Length = 567
Score = 469 bits (1206), Expect = e-129, Method: Compositional matrix adjust.
Identities = 244/515 (47%), Positives = 345/515 (66%), Gaps = 42/515 (8%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG ++ A+ Q++ A ++DEKVL+ L EI ALL++DV KLV ++++ +K
Sbjct: 1 MVLADLGRKLNNALSQLNRAPVVDEKVLDALLKEICAALLESDVNVKLVSQLRSKVKTKA 60
Query: 61 NLD-----DLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKT 115
D N+R ++ +AIF+EL +++DPG F PKKG+P+VIM VGLQG+GKT
Sbjct: 61 KAAFEAGADKGKETNRRNVVHKAIFDELVQLVDPGVEPFKPKKGQPNVIMAVGLQGNGKT 120
Query: 116 TTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEG 175
TTCTK A Y+Q++G+K +VCADTFRAGAFDQ +Q+ATKAK+ FYGSYTE+DPV IA +G
Sbjct: 121 TTCTKLAAYYQRRGFKSCIVCADTFRAGAFDQTRQSATKAKVSFYGSYTETDPVAIAAQG 180
Query: 176 VETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQ 235
V FKKE ++IIVDTSGRH+QE+ LF+EM Q+ EA V PD+ + V+D+SIGQAA Q++
Sbjct: 181 VSKFKKERFEVIIVDTSGRHRQESELFQEMVQIGEA-VKPDMTVLVLDASIGQAAEAQSR 239
Query: 236 AFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRL 295
AFK+S GA+IVTKMDGHAKGGGA+SAVAATK+P+IF+G GEH+ + + F +PF+S+L
Sbjct: 240 AFKESSDFGAIIVTKMDGHAKGGGAISAVAATKTPIIFLGVGEHLTDLDKFSPQPFISKL 299
Query: 296 LGMGDWSGFMDKIHEVVPM--DQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSM 353
LGMGD G M+ +H+V ++Q E+ +K EG ++R EQ QN++ MGPI ++ SM
Sbjct: 300 LGMGDVQGLMEHMHDVAMQNPEKQKEMAKKFEEGKLSIRDWKEQVQNVMSMGPISKIASM 359
Query: 354 LPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMN----------DSRIM 403
+PG E++ +G +++ ++KR + + DSMT ELDS M R+
Sbjct: 360 IPGLPQEML-EGSDEDGARRLKRLIFITDSMTATELDSDGSMFMQMGKDGKPTGLTWRVT 418
Query: 404 RIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLKIPKKGEMSAL----------SRNMNA 453
R+A+GSG VREV E+L +Y+ +A + + G KKG + A R +N
Sbjct: 419 RVAKGSGTSVREVEEVLCQYRMMAHMAKQAGG----KKGWLQAAQKMQAAAGGRGRGLNG 474
Query: 454 -------QHMSKVLPQGMLKQI--GGVGGLQNLMK 479
Q M + +P GM +Q+ GG GG+Q +MK
Sbjct: 475 MPSPAQIQAMQRAMPPGMQQQLRQGGFGGIQEMMK 509
>gi|168008842|ref|XP_001757115.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691613|gb|EDQ77974.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 281
Score = 468 bits (1205), Expect = e-129, Method: Compositional matrix adjust.
Identities = 228/267 (85%), Positives = 247/267 (92%), Gaps = 1/267 (0%)
Query: 229 AAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDV 288
AAFDQAQAFKQSV+VGAVIVTKMDGHAKGGGALSAVAATKSP+IFIGTGEHMDEFE F+
Sbjct: 11 AAFDQAQAFKQSVAVGAVIVTKMDGHAKGGGALSAVAATKSPIIFIGTGEHMDEFEAFET 70
Query: 289 KPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIG 348
K FVSRLLGMGDWSGFM+KI + VPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGP+
Sbjct: 71 KTFVSRLLGMGDWSGFMEKIQDAVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPLS 130
Query: 349 QVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARG 408
QV SM+PGFS E MPKGREKESQAKIK++ TMMDSMT+EELDS+NPKLM DSRI RIARG
Sbjct: 131 QVMSMIPGFSQEFMPKGREKESQAKIKKFTTMMDSMTDEELDSTNPKLMTDSRIYRIARG 190
Query: 409 SGRQVREVMEMLEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
SGR +REV EMLEE+KRLAKIWSKMKGLKIPKKG+MSA+SRNMNAQHMSKVLP MLKQI
Sbjct: 191 SGRGLREVHEMLEEFKRLAKIWSKMKGLKIPKKGDMSAMSRNMNAQHMSKVLPPQMLKQI 250
Query: 469 GGVGGLQNLMKQMGSTKDMMGMFGGGE 495
GG+GGLQ+LMKQM S K+ GMFGGG+
Sbjct: 251 GGIGGLQSLMKQMNS-KEFSGMFGGGD 276
>gi|66819967|ref|XP_643640.1| signal recognition particle 54 kDa subunit [Dictyostelium
discoideum AX4]
gi|75009097|sp|Q75K18.1|SRP54_DICDI RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|60471522|gb|EAL69478.1| signal recognition particle 54 kDa subunit [Dictyostelium
discoideum AX4]
Length = 542
Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust.
Identities = 245/501 (48%), Positives = 345/501 (68%), Gaps = 33/501 (6%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG +S A++ ++ TI++E +N+ L E+ AL ++DV L+ +M+ NIK +
Sbjct: 1 MVLADLGNQLSSALRSLNETTIVNEDTINQLLKEVGNALSKSDVSMSLIIQMRKNIKDKI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
LD +AAG NKR+II+Q +F+EL ++LDPG P + P KGK +++MFVGLQG+GKTT+ TK
Sbjct: 61 KLDQMAAGLNKRKIIKQVVFDELIRLLDPGVPLWKPTKGKSNIVMFVGLQGAGKTTSVTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY+++KKG+ A+VCADTFRAGAFDQ++ NA KAKI +YGS TE DPV +A GV+ FK
Sbjct: 121 LAYFYKKKGFSTAIVCADTFRAGAFDQVRHNAAKAKIHYYGSETEKDPVVVARTGVDIFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
K+ ++IIVDTSGRHKQ++ LFEEM+Q+ E V PD IFVMDSSIGQAA++QA AF+ S
Sbjct: 181 KDGTEIIIVDTSGRHKQDSELFEEMKQI-ETAVKPDNCIFVMDSSIGQAAYEQATAFRSS 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V VG++I+TKMDG++ GGGA+SAVAAT +P+IFIGTGEH+ + E+FD FVS+LLG GD
Sbjct: 240 VKVGSIIITKMDGNSMGGGAISAVAATNTPIIFIGTGEHLTDLELFDPSTFVSKLLGYGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G ++KI EV+P D L+++++G FTLR M +QFQ I+++GPI ++ M+PG +
Sbjct: 300 MKGMLEKIKEVIPEDSTS--LKEIAQGKFTLRSMQQQFQQIMQLGPIDKLVQMIPGMNQ- 356
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEML 420
+P+ + E K+K Y+ ++DS++ +ELD P + RI+ IA+GSGR EV+E+L
Sbjct: 357 -LPQLQGNEGGLKLKAYINILDSLSEKELDGKKP--ITQKRIITIAQGSGRHPNEVVELL 413
Query: 421 EEYKRLAKI----------WSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQIGG 470
E++K K+ S M G PK E + + MNA GG
Sbjct: 414 EQHKTFEKLIGKGGPGGGLGSLMAGKGGPKNMEQAM--KQMNAN--------------GG 457
Query: 471 VGGLQNLMKQMGSTKDMMGMF 491
+ GL N +K MG D+ MF
Sbjct: 458 MQGLMNSLKGMGGMGDLAKMF 478
>gi|449547302|gb|EMD38270.1| hypothetical protein CERSUDRAFT_113440 [Ceriporiopsis subvermispora
B]
Length = 571
Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust.
Identities = 238/515 (46%), Positives = 346/515 (67%), Gaps = 36/515 (6%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG ++ A+ ++ A ++DEKVL+ L E+ ALL++DV KLV ++ +K V
Sbjct: 1 MVLADLGRKLNAALSSLNRAPVVDEKVLDALLKEVCAALLESDVNVKLVASLRQKVKAKV 60
Query: 61 NLD-----DLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKT 115
+ D N++ +IQ+A+++EL +++DPG + PKKG+P+VIM VGLQG+GKT
Sbjct: 61 KVALEGGADKGKEVNRKSVIQKAVYDELVQLVDPGVEPYKPKKGQPNVIMAVGLQGNGKT 120
Query: 116 TTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEG 175
TTCTK A Y+QK+G+K ++VCADTFRAGAFDQ +Q+ATKAK+ ++GSYTE+DPV IA +G
Sbjct: 121 TTCTKLAVYYQKRGFKTSIVCADTFRAGAFDQTRQSATKAKVAYFGSYTETDPVAIAAQG 180
Query: 176 VETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQ 235
V FKKE D+IIVDTSGRHKQE+ LF+EM Q+ +A V P++ + ++D+SIGQAA Q++
Sbjct: 181 VAKFKKERFDVIIVDTSGRHKQESELFQEMVQIGQA-VKPNMTVLILDASIGQAAEAQSR 239
Query: 236 AFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRL 295
AFK+S GA+IVTKMDGHAKGGGA+SAVA TK+P+IF+G GEH+ + + F +PF+S+L
Sbjct: 240 AFKESADFGAIIVTKMDGHAKGGGAISAVAVTKTPIIFLGVGEHLHDLDRFSPQPFISKL 299
Query: 296 LGMGDWSGFMDKIHEVVPM--DQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSM 353
LG+GD G M+ +H++ D+Q E+ +KL EG ++R EQ QN++ MGPI ++ SM
Sbjct: 300 LGLGDVQGLMEHMHDLATQNPDKQKEIAKKLEEGKLSIRDWREQIQNVMNMGPISKIASM 359
Query: 354 LPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMN----------DSRIM 403
+PG E+M +G ++ES ++KR + ++DSMT+ ELDS M R+
Sbjct: 360 IPGLPQEMM-QGSDEESSLRMKRMIYIVDSMTSSELDSDGSPFMEVGKDGKPIGLTWRVT 418
Query: 404 RIARGSGRQVREVMEMLEEYKRLAKI---------W----SKMKGLKIPKKGEMSALSRN 450
R+ARGSG VREV E+L +Y+ +A + W KM+ + + +
Sbjct: 419 RVARGSGTSVREVEELLCQYRMMANMAKQAGGKNGWLQTIQKMQSAAGGRGRGANGMPTP 478
Query: 451 MNAQHMSKVLPQGML----KQIGGVGGLQNLMKQM 481
Q M + +P GML +Q+ GG+Q +MK M
Sbjct: 479 AQIQAMQRAMPPGMLQQMQRQMRSGGGMQEMMKAM 513
>gi|296420065|ref|XP_002839601.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295635784|emb|CAZ83792.1| unnamed protein product [Tuber melanosporum]
Length = 546
Score = 467 bits (1202), Expect = e-129, Method: Compositional matrix adjust.
Identities = 233/435 (53%), Positives = 322/435 (74%), Gaps = 7/435 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A+ ++ + ++DEKV + L EI AL++ADV KLV ++ +IK V
Sbjct: 1 MVLADLGKRITSAVSDLARSNVVDEKVFDGMLKEICSALIEADVNVKLVSNLRKSIKHTV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N +L NK+R+IQ+A+F+EL K++DP F PKKG+ +VIMFVGLQGSGKTTTCTK
Sbjct: 61 NFKELNPNVNKKRLIQKAVFDELVKLVDPHSEPFKPKKGRSNVIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G+K LVCADTFRAGAFDQLKQNATKAKIP+YGSYTE+DPV+++ EGVE FK
Sbjct: 121 LARHYQARGFKACLVCADTFRAGAFDQLKQNATKAKIPYYGSYTETDPVKVSREGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KE D+IIVDTSGRH+QE LF EM Q+ +A V PD I V+D+SIGQAA Q++AFK+S
Sbjct: 181 KERFDIIIVDTSGRHQQEKELFAEMVQIQQA-VTPDQTIMVLDASIGQAAEAQSKAFKES 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
+ GA+I+TK DGHA GGGA+SAVAAT++P++FIGTGEHM + E F + FVS+LLGMGD
Sbjct: 240 ANFGAIIITKTDGHAAGGGAISAVAATRTPIMFIGTGEHMLDLERFAPQAFVSKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G ++ + + +DQ+ + ++ + EG FT+R + +Q NI+KMGP+ ++ M+PG S+
Sbjct: 300 MQGLVEHVQS-LKLDQK-DTMKHIQEGIFTVRDLRDQLGNIMKMGPLSKMAGMIPGL-SQ 356
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND--SRIMRIARGSGRQVREVME 418
+M ++E K+KR + +MDSMT +ELD S+ K +D +R+ RIA GSG VREV +
Sbjct: 357 MMGDVGDEEGSMKLKRMIYIMDSMTEKELD-SDGKCFSDQPTRMTRIAHGSGTTVREVED 415
Query: 419 MLEEYKRLAKIWSKM 433
+L +++ +A + KM
Sbjct: 416 VLTQHRMMAGMAKKM 430
>gi|409045874|gb|EKM55354.1| hypothetical protein PHACADRAFT_255925 [Phanerochaete carnosa
HHB-10118-sp]
Length = 564
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 245/519 (47%), Positives = 344/519 (66%), Gaps = 44/519 (8%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG ++ A+ ++ A I+DEKVL+ L ++ ALL+ DV KLV +++ +K V
Sbjct: 1 MVLADLGRKLNAALSSLNRAPIVDEKVLDTLLKDVCAALLETDVNVKLVAQLRQKVKAKV 60
Query: 61 NLD-----DLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKT 115
D N++ I+Q+AIF+EL +++DPG + PKKG+ +VIM VGLQG+GKT
Sbjct: 61 KASLESGADKGKDVNRKSIVQKAIFDELVQLVDPGVEPYKPKKGQSNVIMAVGLQGNGKT 120
Query: 116 TTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEG 175
TTCTK A Y+QK+G+K +VCADTFRAGAFDQ +Q+ATKAK+ ++GSYTE+DPV IA +G
Sbjct: 121 TTCTKLAVYYQKRGFKSCIVCADTFRAGAFDQTRQSATKAKVAYFGSYTETDPVAIAAQG 180
Query: 176 VETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQ 235
V FKKE D+IIVDTSGRHKQE+ LF+EM Q+ EA V P++ I ++D+SIGQAA QA+
Sbjct: 181 VAKFKKERFDVIIVDTSGRHKQESELFQEMVQIGEA-VKPNMTIMILDASIGQAAEAQAR 239
Query: 236 AFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRL 295
AFK+S + GA+IVTKMDGHAKGGGA+SAVA TK+P+IF+G GEH+ + E F +PF+S+L
Sbjct: 240 AFKESSNFGAIIVTKMDGHAKGGGAISAVAVTKTPIIFLGVGEHLHDLEKFSPQPFISKL 299
Query: 296 LGMGDWSGFMDKIHEVVPM--DQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSM 353
LG+GD G M+ + ++ D+Q E+ +KL EG ++R EQ QN++ MGPI ++ SM
Sbjct: 300 LGLGDVQGLMEHMQDIATQNPDKQKEIAKKLEEGKLSIRDWREQIQNVMSMGPISKIASM 359
Query: 354 LPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMN----------DSRIM 403
+PG E++ +G ++E ++KR + + DSMT ELDS M SR+
Sbjct: 360 IPGLPQEIV-QGSDEEGSMRMKRMIYISDSMTAAELDSDGSPFMEFGKDGKPIGLTSRVT 418
Query: 404 RIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLKIPKKGEMSAL----------SRNMNA 453
R+ARGSG VREV E+L +Y+ +A + + G K G + A R +N
Sbjct: 419 RVARGSGTSVREVEELLCQYRMMANMAKQAGG----KNGWLQAAQKMQQAAGGRGRGVNG 474
Query: 454 -------QHMSKVLPQGMLKQIG----GVGGLQNLMKQM 481
Q M + +P GML+Q+ G GG+Q +MK M
Sbjct: 475 TPTPAQIQAMQRAMPPGMLQQLQRTMRGGGGMQEMMKAM 513
>gi|389748926|gb|EIM90103.1| signal recognition particle protein [Stereum hirsutum FP-91666 SS1]
Length = 570
Score = 464 bits (1194), Expect = e-128, Method: Compositional matrix adjust.
Identities = 241/519 (46%), Positives = 345/519 (66%), Gaps = 45/519 (8%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG ++ A+ ++ A+++D+KVL+ L E+ ALL++DV KLV +++ +K V
Sbjct: 1 MVLADLGRKLNAALSSLNRASLVDDKVLDALLKEVCAALLESDVNVKLVSQLRQKVKAKV 60
Query: 61 NLDDLAAGH-----NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKT 115
++G N++ ++Q+AIF+EL ++DPG + P+KG P+VIM VGLQG+GKT
Sbjct: 61 KASLESSGDKVKEVNRKNVVQKAIFDELVNLVDPGVEPYKPRKGHPNVIMAVGLQGNGKT 120
Query: 116 TTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEG 175
TTCTK A ++QK+G+K +VCADTFRAGAFDQ +Q+ATKAK+ ++GSYTE+DPV IA +G
Sbjct: 121 TTCTKLAVHYQKRGFKSCIVCADTFRAGAFDQTRQSATKAKVAYFGSYTETDPVSIAAQG 180
Query: 176 VETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQ 235
V FKKE ++IIVDTSGRHKQE LFEEM Q+ +A V PD+ + VMD+SIGQAA Q+
Sbjct: 181 VAKFKKEKFEVIIVDTSGRHKQEGELFEEMVQIGKA-VKPDMTVLVMDASIGQAAEAQSS 239
Query: 236 AFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRL 295
AFK+S GA+IVTKMDGHAKGGGA+SAVAATK+P+IF+GTGEH+ + + F +PF+S+L
Sbjct: 240 AFKESADFGAIIVTKMDGHAKGGGAISAVAATKTPIIFLGTGEHLTDLDKFSPQPFISKL 299
Query: 296 LGMGDWSGFMDKIHEVVPM--DQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSM 353
LGMGD G M+ + ++ D+Q E+ +KL EG ++R EQ QN++ MGPI ++ SM
Sbjct: 300 LGMGDVQGLMEHMQDLATQNPDRQKEMAKKLEEGKLSIRDWREQIQNVMNMGPISKIASM 359
Query: 354 LPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMN----------DSRIM 403
+PG +++ G ++E ++KR + + DSMT+ ELDS + R+
Sbjct: 360 IPGLPQDMLA-GTDEEGSMRMKRMIYITDSMTSAELDSDGSLFLEMGKDGKPVDLTWRVT 418
Query: 404 RIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLKIPKKGEMSALSR-------------- 449
R+ARGSG VREV E+L +Y+ +A + + G K G +SA+ +
Sbjct: 419 RVARGSGTSVREVEELLCQYQMMANMAKQAGG----KNGWLSAMQKMQSAAGGRGRGANG 474
Query: 450 ---NMNAQHMSKVLPQGML----KQIGGVGGLQNLMKQM 481
Q M + +P GML KQ+ G GGLQ +MK +
Sbjct: 475 MPTQAQIQAMQRAMPPGMLQNMQKQMRG-GGLQEMMKTL 512
>gi|395333501|gb|EJF65878.1| signal recognition particle protein [Dichomitus squalens LYAD-421
SS1]
Length = 571
Score = 462 bits (1190), Expect = e-127, Method: Compositional matrix adjust.
Identities = 237/515 (46%), Positives = 341/515 (66%), Gaps = 36/515 (6%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG ++ A+ ++ A ++D+KVL+ L E+ ALL++DV KLV +++ +K V
Sbjct: 1 MVLADLGRKLNAALSSLNRAPVVDDKVLDALLKEVCAALLESDVNVKLVAQLRQKVKTKV 60
Query: 61 NLD-----DLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKT 115
D N+R ++Q+A+F+EL +++DPG + PKKG P+VIM VGLQG+GKT
Sbjct: 61 KAALESGADKGKEQNRRHVVQKAVFDELVQLVDPGVEPYKPKKGHPNVIMAVGLQGNGKT 120
Query: 116 TTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEG 175
TTCTK A Y+Q++G+K +VCADTFRAGAFDQ +Q+ATKAK+ ++GSYTE+DPV IA +G
Sbjct: 121 TTCTKLAVYYQRRGFKSCIVCADTFRAGAFDQTRQSATKAKVAYFGSYTETDPVTIAAQG 180
Query: 176 VETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQ 235
V FKKE D+IIVDTSGRHKQE+ LF EM Q+ EA V PD + V+D+SIGQAA QA+
Sbjct: 181 VAKFKKERFDVIIVDTSGRHKQESELFREMVQIGEA-VQPDQTVMVLDASIGQAAEAQAR 239
Query: 236 AFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRL 295
AFK+S + GA+IVTKMDGHAKGGGA+SAVAATK+P+IF+G GEH+ + + F +PF+S+L
Sbjct: 240 AFKESANFGAIIVTKMDGHAKGGGAISAVAATKTPIIFLGVGEHLHDLDKFSPQPFISKL 299
Query: 296 LGMGDWSGFMDKIHEVVPM--DQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSM 353
LG+GD G ++ + ++ D+Q E+ +KL EG ++R EQ QN++ MGP+ ++ SM
Sbjct: 300 LGLGDMQGLVEHMQDIATQNPDKQKEMAKKLEEGKLSIRDWREQIQNVMNMGPLSKIASM 359
Query: 354 LPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMN----------DSRIM 403
+PG +L+ +G ++E ++KR + + DSMT ELDS M R+
Sbjct: 360 IPGLPQDLL-QGSDEEGTLRMKRMIYITDSMTAAELDSDGSMFMEWGKDGKPTGLTWRVQ 418
Query: 404 RIARGSGRQVREVMEMLEEYKRLAKI---------W----SKMKGLKIPKKGEMSALSRN 450
R+ARGSG VREV ++L +Y+ +A + W KM+ + + +
Sbjct: 419 RVARGSGTSVREVEDLLCQYRMMANMAKQAGGKNGWLQAIQKMQAAAGGRGRGANGMPTP 478
Query: 451 MNAQHMSKVLPQGML----KQIGGVGGLQNLMKQM 481
Q M + +P GML +Q+ G GG+Q +MK M
Sbjct: 479 AQIQAMQRAMPPGMLQQLQRQMRGGGGMQEMMKAM 513
>gi|169853092|ref|XP_001833227.1| signal recognition particle protein [Coprinopsis cinerea
okayama7#130]
gi|116505605|gb|EAU88500.1| signal recognition particle protein [Coprinopsis cinerea
okayama7#130]
Length = 574
Score = 462 bits (1190), Expect = e-127, Method: Compositional matrix adjust.
Identities = 246/519 (47%), Positives = 346/519 (66%), Gaps = 44/519 (8%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG ++ A+ ++ A +IDEKVL+ L EIT ALL++DV KLV ++ +K V
Sbjct: 1 MVLADLGRKLNSALSSLNRAPVIDEKVLDATLKEITAALLESDVNVKLVASLRQKVKAKV 60
Query: 61 NLDDLAAGH-----NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKT 115
G NK+ +IQ+A+F+EL ++DPG + P KG+ +VIM VGLQG+GKT
Sbjct: 61 KAALDGQGEKKEPSNKKHLIQKAVFDELVALVDPGVEPYKPVKGRTNVIMAVGLQGNGKT 120
Query: 116 TTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEG 175
TTCTK A Y+QK+G+K A+VCADTFRAGAFDQ +Q+ TKAKI ++GSYTE++PV IA +G
Sbjct: 121 TTCTKLAAYYQKRGFKSAIVCADTFRAGAFDQTRQSCTKAKIAYFGSYTETNPVSIAQQG 180
Query: 176 VETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQ 235
V+ FKKE +++IVDTSGRHKQE LF EM ++SEA V PD+ + V+D+SIGQAA QA+
Sbjct: 181 VQKFKKERFEVVIVDTSGRHKQERELFGEMIEISEA-VKPDMTVLVLDASIGQAAEGQAK 239
Query: 236 AFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRL 295
AFK+S GA+IVTKMDGHAKGGGA+SAVAATK+P+IF+G GEH+ + + F +PF+S+L
Sbjct: 240 AFKESADFGAIIVTKMDGHAKGGGAISAVAATKTPIIFLGVGEHLHDLDRFSPQPFISKL 299
Query: 296 LGMGDWSGFMDKIHEVVPM--DQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSM 353
LG+GD G M+ + ++ D+Q E+ +KL EG ++R EQ QN++ MGPI ++ SM
Sbjct: 300 LGLGDVQGLMEHMQDLATQNPDKQKEMAKKLEEGKLSIRDWREQIQNVMNMGPISKIASM 359
Query: 354 LPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSS-NPKLMNDS---------RIM 403
+PG EL+ +G ++E ++KR + + DSMT ELDS +P L+ R+
Sbjct: 360 IPGLPQELL-QGSDEEGSMRMKRMIYITDSMTASELDSDGSPFLLTGKDGKPTGLTWRVT 418
Query: 404 RIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLKIPKKGEMSAL----------SRNMNA 453
R+A+GSG VREV E+L +Y+ +A + + G K G +SA+ R +N
Sbjct: 419 RVAKGSGTSVREVEELLCQYRMMANMAKQAGG----KNGWLSAMQKMQQAAGGKGRGLNG 474
Query: 454 -------QHMSKVLPQGML----KQIGGVGGLQNLMKQM 481
Q M + +P GML +Q+ GG+Q +MK M
Sbjct: 475 MPTPQQIQAMQRAMPPGMLQQMQRQLRSGGGMQEMMKAM 513
>gi|393216852|gb|EJD02342.1| signal recognition particle protein [Fomitiporia mediterranea
MF3/22]
Length = 578
Score = 462 bits (1189), Expect = e-127, Method: Compositional matrix adjust.
Identities = 236/519 (45%), Positives = 347/519 (66%), Gaps = 44/519 (8%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG ++ A+ + A ++D+KV++ L E+ ALL++DV KLV ++++ +K V
Sbjct: 1 MVLADLGRKLNAALSSLRAAPVVDDKVIDALLKEVCAALLESDVNVKLVSQLRSKVKAKV 60
Query: 61 NLD-----DLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKT 115
D N++ ++Q+AIF+EL +++DPG S+ P+KG P+VIM VGLQG+GKT
Sbjct: 61 KAQFEAGADRGKEQNRKAVVQKAIFDELVQLVDPGVDSYKPRKGHPNVIMAVGLQGNGKT 120
Query: 116 TTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEG 175
TTCTK A ++QK+G+K +VCADTFRAGAFDQ +Q+ATKAK+ ++GSYTE+DPV IA +G
Sbjct: 121 TTCTKLAVHYQKRGFKSCIVCADTFRAGAFDQTRQSATKAKVAYFGSYTETDPVTIAAQG 180
Query: 176 VETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQ 235
V FKKE ++IIVDTSGRHKQE+ LF+EM Q+ EA V PD+ + V+D+SIGQAA Q++
Sbjct: 181 VAKFKKEKFEVIIVDTSGRHKQESELFQEMVQIGEA-VKPDMTVLVLDASIGQAAEAQSR 239
Query: 236 AFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRL 295
AFK+S GA+IVTKMDGHAKGGGA+SAVAATK+P+IF+G GEH+ + + F +PF+S+L
Sbjct: 240 AFKESADFGAIIVTKMDGHAKGGGAISAVAATKTPIIFLGVGEHLTDLDRFSPQPFISKL 299
Query: 296 LGMGDWSGFMDKIHEVVPM--DQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSM 353
LG+GD G M+ +H++ ++Q E+ +KL EG ++R EQ QNI+ MGP+ ++ SM
Sbjct: 300 LGLGDVQGLMEHMHDLANANPEKQKEMAKKLEEGKLSIRDWREQIQNIMNMGPLSKIASM 359
Query: 354 LPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMN----------DSRIM 403
+PGF +++ +G ++E ++KR + + DSM+ +ELDS + R+
Sbjct: 360 IPGFPQDML-QGSDEEGTLRMKRMLYITDSMSAQELDSDGSLFLTFGKDGKPDGITWRVT 418
Query: 404 RIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLKIPKKGEMSALSR-------------- 449
R+ARGSG VREV E+L +Y+ +A + + G K G M A+ +
Sbjct: 419 RVARGSGTSVREVEELLCQYRMMANMAKQAGG----KNGWMQAVQKMQAAAGGKGRGAGG 474
Query: 450 ---NMNAQHMSKVLPQGMLKQIG----GVGGLQNLMKQM 481
Q M + +P GM++Q+ G GG+Q +MK M
Sbjct: 475 MPSPAQIQAMQRAMPPGMMQQMQRAMRGGGGMQEMMKTM 513
>gi|219121088|ref|XP_002185775.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|209582624|gb|ACI65245.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 510
Score = 462 bits (1189), Expect = e-127, Method: Compositional matrix adjust.
Identities = 235/511 (45%), Positives = 355/511 (69%), Gaps = 33/511 (6%)
Query: 1 MVLAQLGGSISRAIQQMSNATI--IDEKVLNECLNEITRALLQADVQFKLVREMQTNIKK 58
MVLA+LGG + +++++ +A+ + EK ++ L+++ RAL++ADV KLV +++ +IK
Sbjct: 1 MVLAELGGKLRDSLRKLQSASTQGVTEKEVDALLSDVARALIEADVNVKLVMQLRASIKG 60
Query: 59 IVNLD---------DLAAGHNKRRIIQQAIFNELCKMLDP--GKPSFTPKKGKPSVIMFV 107
V ++ A + + IQ+A+ +EL +L P + ++T +KGKP+V++FV
Sbjct: 61 KVEDLLDDDDEKQPNVRAQRDLAKTIQRAVVDELVALLSPTYAQKAYTMRKGKPNVVLFV 120
Query: 108 GLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESD 167
GLQG+GKTT+ K+A+Y+Q++GWK A+VCADTFRAGAFDQLKQNATK ++PFYGSYTE+D
Sbjct: 121 GLQGAGKTTSIAKFAHYYQRRGWKTAMVCADTFRAGAFDQLKQNATKLRVPFYGSYTEAD 180
Query: 168 PVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIG 227
PV IA +GV F K+ ++IIVDTSGRHKQE+ALF+EM+++SEA V PD + VMD++ G
Sbjct: 181 PVVIAEDGVRQFVKDRYEVIIVDTSGRHKQESALFDEMQEISEA-VRPDNTVLVMDATQG 239
Query: 228 QAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFD 287
QA +DQA AF +V VGAVIVTK+DGHAKGGGALSAVAAT SP++F+G+GEH D+ + F+
Sbjct: 240 QAVYDQALAFHNAVDVGAVIVTKLDGHAKGGGALSAVAATSSPILFLGSGEHFDDLDPFN 299
Query: 288 VKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPI 347
+ FVS+LLG GD G MD + V Q +L++++S+G FTLR+MY+QF+ ++ MGP+
Sbjct: 300 AQSFVSKLLGFGDVRGLMDAMKSVTDSKTQEQLMERMSKGEFTLRMMYQQFEKVMSMGPL 359
Query: 348 GQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDS-------SNPKLMNDS 400
++ M+PG L+PKG ++++ +++++M MMDSM N ELD +P++ +S
Sbjct: 360 NKLVGMMPGMPDYLVPKGGDQQATDRLRKFMIMMDSMNNAELDGKIDMHVKDDPQI--ES 417
Query: 401 RIMRIARGSGRQVREVMEMLEEYKRLAKIWSKM-------KGLKIPKKGEMSALSRNMN- 452
RI RIA GSG EV +L +K+ + SKM KG + + + + +N N
Sbjct: 418 RIRRIAAGSGSHPNEVKMLLLAHKQFEGMVSKMGKSGLMGKGAQQRQAQLQAQMRKNPNF 477
Query: 453 -AQHMSKVLPQGMLKQIGGVGGLQNLMKQMG 482
Q ++++ P+ ML+Q+GG + +M+QM
Sbjct: 478 INQRLNQMDPR-MLQQMGGRESVMAMMQQMA 507
>gi|340923542|gb|EGS18445.1| hypothetical protein CTHT_0050420 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 514
Score = 462 bits (1188), Expect = e-127, Method: Compositional matrix adjust.
Identities = 242/493 (49%), Positives = 344/493 (69%), Gaps = 14/493 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ A +DEK + L EI ALL+ADV +LV +++ +I+ V
Sbjct: 1 MVLQDLGRRINAAVSDLTRAPTLDEKTFDLMLKEICTALLEADVNVRLVNQLRKSIRTTV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N +L NK+R+IQ+A+F+EL +++DP F PKKGK +VIMFVGLQG+GKTTTCTK
Sbjct: 61 NFKELPPAVNKKRLIQKAVFDELVRLVDPHAEPFKPKKGKSNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G+K LVCADTFRAGAFDQLKQNATKAKIP+YGS TE+DPV +A +GVE FK
Sbjct: 121 LARHYQSRGFKSCLVCADTFRAGAFDQLKQNATKAKIPYYGSLTETDPVVVARDGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KE ++IIVDTSGRH+QE+ALF+EM ++ +A + PD I V+D+SIGQ A QA+AFK++
Sbjct: 181 KEKFEVIIVDTSGRHRQESALFQEMVEI-QAAIKPDETIMVLDASIGQQAEAQAKAFKEA 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
GA+I+TK DGHA GGGA+SAVAAT +P++FIGTGEHM + E F + F+S+LLGMGD
Sbjct: 240 ADFGAIIITKTDGHAAGGGAISAVAATGTPIVFIGTGEHMLDLERFIPRNFISKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G ++ + + +DQ+ E ++ +SEG FT+R + +Q QNI+KMGP+ ++ M+PG ++
Sbjct: 300 IPGLVEHVQS-LKLDQK-ETIKHISEGIFTIRDLRDQLQNIMKMGPLSKMAGMIPGMAN- 356
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEM 419
LM + E K+KR + + DSMT++ELDS ++ +R+ R+ARGSG VREV ++
Sbjct: 357 LMQGMDDAEGSLKLKRMIYICDSMTDKELDSDGKIFIDQPTRMTRVARGSGTTVREVEDL 416
Query: 420 LEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQIGGVGGLQNL-M 478
L + + +A + KM G + SA++ + AQ ++ M K++ +GGL N M
Sbjct: 417 LTQQRMMAGMAKKMGGNMKNIQRAQSAIAGSNKAQQLA-----AMQKRLQSMGGLGNAGM 471
Query: 479 KQMGSTKDMMGMF 491
M S +M MF
Sbjct: 472 PDMAS---LMKMF 481
>gi|336377467|gb|EGO18629.1| hypothetical protein SERLADRAFT_454209 [Serpula lacrymans var.
lacrymans S7.9]
Length = 578
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 240/517 (46%), Positives = 343/517 (66%), Gaps = 38/517 (7%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG ++ A +S AT++DEKVL+ L EIT ALL++DV KLV ++ +K V
Sbjct: 1 MVLADLGRKLNAAFSSLSRATVVDEKVLDATLKEITAALLESDVNVKLVASLRQKVKVKV 60
Query: 61 N--LD----DLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGK 114
LD D + N++ ++Q+A+F+EL ++DPG + PKKG+ +++M VGLQG+GK
Sbjct: 61 KAALDGGSSDKSKEANRKNLVQKAVFDELVHLVDPGVEPYKPKKGQCNILMAVGLQGNGK 120
Query: 115 TTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVE 174
TTTCTK A Y+QK+G+K +VCADTFRAGAFDQ +Q+ATKAK+ ++GSYTE+DPV IA +
Sbjct: 121 TTTCTKLAVYYQKRGFKSCIVCADTFRAGAFDQTRQSATKAKVAYFGSYTETDPVVIAAQ 180
Query: 175 GVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQA 234
GV FKKE ++IIVDTSGRHKQE+ LF EM Q+ EA V P + I ++D+SIGQAA Q+
Sbjct: 181 GVAKFKKERFEVIIVDTSGRHKQESELFREMVQIGEA-VKPHMTILILDASIGQAAEAQS 239
Query: 235 QAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSR 294
+AFK S GA+IVTKMDGHAKGGGA+SAVAATK+P+IF+G GEH+ + + F +PF+S+
Sbjct: 240 RAFKDSADFGAIIVTKMDGHAKGGGAISAVAATKTPIIFLGVGEHLHDLDRFSPQPFISK 299
Query: 295 LLGMGDWSGFMDKIHEVVPM--DQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFS 352
LLG+GD G M+ + ++ D+Q E+ +KL EG ++R EQ QN++ MGPI ++ S
Sbjct: 300 LLGLGDMQGLMEHMQDLATQNPDKQKEMAKKLEEGKLSIRDWREQIQNVMNMGPISKIAS 359
Query: 353 MLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDS----------RI 402
M+PG EL+ G ++E ++KR + + DSMT+ ELDS M+ S R+
Sbjct: 360 MIPGLPQELL-SGSDEEGSLRMKRMIYITDSMTSTELDSDGAVFMDMSKDGKPVGLTWRV 418
Query: 403 MRIARGSGRQVREVMEMLEEYKRLAKI---------W----SKMKGLKIPKKGEMSALSR 449
R+A+GSG VREV E+L +Y+ +A + W KM+ + + + +
Sbjct: 419 TRVAKGSGTSVREVEELLCQYRMMANMAKQAGGKNGWLQAMQKMQSIAGGRGRGANGMPT 478
Query: 450 NMNAQHMSKVLPQGMLKQI-----GGVGGLQNLMKQM 481
Q M + +P G L+Q+ G GG+Q ++K M
Sbjct: 479 PAQIQAMQRAMPPGALQQMQRQLRSGGGGMQEMLKAM 515
>gi|392558546|gb|EIW51733.1| signal recognition particle protein [Trametes versicolor FP-101664
SS1]
Length = 578
Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust.
Identities = 238/519 (45%), Positives = 344/519 (66%), Gaps = 44/519 (8%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG ++ A+ ++ A++ID+KVL+ L E+ ALL++DV KLV +++ +K V
Sbjct: 1 MVLADLGRKLNAALSSLNRASVIDDKVLDALLKEVCAALLESDVNVKLVAQLRQKVKAKV 60
Query: 61 NLD-----DLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKT 115
D N+R ++Q+AIF+EL ++DPG + PKKG+ +VIM VGLQG+GKT
Sbjct: 61 KAAIEGGADKGKEQNRRNVVQKAIFDELVGLVDPGVEPYKPKKGQSNVIMAVGLQGNGKT 120
Query: 116 TTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEG 175
TTCTK A Y+QK+G+K +VCADTFRAGAFDQ +Q+ATKAK+ ++GSYTE+DPV IA +G
Sbjct: 121 TTCTKLAVYYQKRGFKSCIVCADTFRAGAFDQTRQSATKAKVAYFGSYTETDPVSIAAQG 180
Query: 176 VETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQ 235
V FKKE D+IIVDTSGRHKQE+ LF+EM Q+ EA V P++ + ++D+SIGQAA QA
Sbjct: 181 VAKFKKERFDVIIVDTSGRHKQESELFKEMVQIGEA-VKPNMTVMILDASIGQAAEAQAH 239
Query: 236 AFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRL 295
AFK+S + GA+IVTKMDGHAKGGGA+SAVAATK+P+IF+G GEH+ + + F +PF+S+L
Sbjct: 240 AFKESANFGAIIVTKMDGHAKGGGAISAVAATKTPIIFLGVGEHLHDLDKFSPQPFISKL 299
Query: 296 LGMGDWSGFMDKIHEVVPM--DQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSM 353
LGMGD G ++ + ++ D+Q E+ +KL EG ++R EQ QN++ MGP+ ++ SM
Sbjct: 300 LGMGDVQGLVEHMQDMATQNPDKQKEMAKKLEEGKLSIRDWREQIQNVMNMGPLSKIASM 359
Query: 354 LPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDS----------RIM 403
+PG +++ +G ++E ++KR + + DSMT ELDS M + R+
Sbjct: 360 IPGLPQDML-QGSDEEGSLRMKRMIYITDSMTAAELDSDGALFMEWAKDGKPTGLTWRVT 418
Query: 404 RIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLKIPKKGEMSALSR-------------- 449
R+ARGSG VREV ++L +Y+ +A + + G K G +SA+ +
Sbjct: 419 RVARGSGTSVREVEDLLCQYRMMANMAKQAGG----KNGWLSAMQKMQAAAGGRGRGANG 474
Query: 450 ---NMNAQHMSKVLPQGML----KQIGGVGGLQNLMKQM 481
Q M + +P GML +Q+ GG+Q +MK M
Sbjct: 475 MPTQAQIQAMQRAMPPGMLQQMQRQMRSGGGMQEMMKAM 513
>gi|302691416|ref|XP_003035387.1| hypothetical protein SCHCODRAFT_74858 [Schizophyllum commune H4-8]
gi|300109083|gb|EFJ00485.1| hypothetical protein SCHCODRAFT_74858 [Schizophyllum commune H4-8]
Length = 573
Score = 459 bits (1181), Expect = e-126, Method: Compositional matrix adjust.
Identities = 244/526 (46%), Positives = 348/526 (66%), Gaps = 41/526 (7%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQ----TNI 56
MVLA LG ++ A+ ++ A ++DEKVL+ L EIT ALL++DV KLV ++ T +
Sbjct: 1 MVLADLGRKLNAALSSLNRAPVVDEKVLDATLKEITAALLESDVNVKLVASLRSKVKTKV 60
Query: 57 KKIVNLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTT 116
K I D N++ +IQ+A+F+EL ++DPG + PKKG +VIM VGLQG+GKTT
Sbjct: 61 KAIFEGGDKTKDVNRKNVIQKAVFDELVALVDPGVEPYKPKKGHTNVIMAVGLQGNGKTT 120
Query: 117 TCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGV 176
TCTK A ++QK+G+K A+VCADTFRAGAFDQ +Q+ATKAK+ ++GSYTE+DPV IA +GV
Sbjct: 121 TCTKLAVHYQKRGFKSAIVCADTFRAGAFDQTRQSATKAKVAYFGSYTETDPVSIAAQGV 180
Query: 177 ETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQA 236
FKKE ++IIVDTSGRHKQE LFEEM + +A V PD+ I V+D+SIGQAA QA+A
Sbjct: 181 AKFKKERFEVIIVDTSGRHKQEQELFEEMILIGQA-VKPDMTILVLDASIGQAAEAQARA 239
Query: 237 FKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLL 296
FK S GA+IVTKMDGHAKGGGA+SAVAAT++P+IF+G GEH+ + + F +PF+S+LL
Sbjct: 240 FKDSADFGAIIVTKMDGHAKGGGAISAVAATQTPIIFLGVGEHLHDLDRFAPQPFISKLL 299
Query: 297 GMGDWSGFMDKIHEVVPM--DQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSML 354
G+GD G ++ +H++ D+Q E+ +K +G ++R EQ N++ MGPI ++ SM+
Sbjct: 300 GLGDMQGLIEHMHDLTAQNPDKQKEMAKKFEQGKLSIRDWREQISNVMSMGPISKIASMI 359
Query: 355 PGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMN----------DSRIMR 404
PG +E++ +G ++E ++KR + + DSMT ELDS M R+ R
Sbjct: 360 PGLPAEML-QGSDEEGSLRMKRMIYITDSMTAAELDSDGSMFMEWGKDGKPTGLTWRVTR 418
Query: 405 IARGSGRQVREVMEMLEEYKRLAKIWSKMKG----LKIPKKGEMSALSRNMNA------- 453
+A+GSG V+EV E+L +Y+ +A + + G L+ +K + A S+ + A
Sbjct: 419 VAKGSGTSVKEVEELLCQYRMMANMAKQAGGKNGWLQTMQKIQSVAGSKGLGANGMPTPA 478
Query: 454 --QHMSKVLPQGML----KQIGGVGGLQNLMKQMGSTKDMMGMFGG 493
Q + + +P GML KQ+ G GG+Q +MK MMG GG
Sbjct: 479 QIQAIQRSMPPGMLQQMRKQMQGGGGMQEMMKA------MMGQGGG 518
>gi|170088384|ref|XP_001875415.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650615|gb|EDR14856.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 543
Score = 459 bits (1181), Expect = e-126, Method: Compositional matrix adjust.
Identities = 235/499 (47%), Positives = 335/499 (67%), Gaps = 33/499 (6%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG ++ A+ ++ A I+DEKVL+ L EIT ALL++DV K V ++ +K V
Sbjct: 1 MVLADLGRRLNAALSSLNKAPIVDEKVLDATLKEITAALLESDVNVKFVASLRQKVKAKV 60
Query: 61 --NLDDLAAGH----NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGK 114
++ AA N++ +IQ+A+F+EL ++DPG + PKKG+P+VIM VGLQG+GK
Sbjct: 61 KATIESAAADKSKETNRKNLIQKAVFDELVALVDPGVEPYKPKKGQPNVIMAVGLQGNGK 120
Query: 115 TTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVE 174
TTTCTK A ++QK+G+K A+VCADTFRAGAFDQ +Q+ATKAK+ ++GSYTE+DPV IA +
Sbjct: 121 TTTCTKLAVHYQKRGFKSAIVCADTFRAGAFDQTRQSATKAKVAYFGSYTETDPVSIAAQ 180
Query: 175 GVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQA 234
GV FKKE D+IIVDTSGRHKQE+ LFEEM Q+ EA V PD+ + ++D+SIGQAA Q+
Sbjct: 181 GVAKFKKERFDVIIVDTSGRHKQESELFEEMVQIGEA-VKPDMTVLILDASIGQAAEAQS 239
Query: 235 QAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSR 294
+AFK+S + GA+IVTKMDGHAKGGGA+SAVAATK+P+IF+G GEH+ + + F +PF+S+
Sbjct: 240 RAFKESANFGAIIVTKMDGHAKGGGAISAVAATKTPIIFLGVGEHLHDLDRFSPQPFISK 299
Query: 295 LLGMGDWSGFMDKIHEVVPM--DQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFS 352
LLG+GD G M+ + ++ D+Q E+ +KL EG ++R EQ N++ MGPI ++ S
Sbjct: 300 LLGLGDMQGLMEHMQDLATQNPDKQKEMAKKLEEGKLSIRDWREQISNVMNMGPISKIAS 359
Query: 353 MLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMN----------DSRI 402
M+PG +++ +G ++E ++KR + + DSMT ELDS M R+
Sbjct: 360 MIPGLPQDML-QGSDEEGSLRMKRMIYITDSMTAGELDSDGAPFMEVGKDGKPVGLTWRV 418
Query: 403 MRIARGSGRQVREVMEMLEEYKRLAKI---------W----SKMKGLKIPKKGEMSALSR 449
R+A+GSG VREV E+L +Y+ +A + W KM+ K +
Sbjct: 419 TRVAKGSGTSVREVEELLCQYRMMATMAKQAGGKNGWLQAMQKMQSAAGGKGRGAGGMPT 478
Query: 450 NMNAQHMSKVLPQGMLKQI 468
Q M + +P GML+Q+
Sbjct: 479 PAQIQAMQRSMPPGMLQQM 497
>gi|290977140|ref|XP_002671296.1| predicted protein [Naegleria gruberi]
gi|284084864|gb|EFC38552.1| predicted protein [Naegleria gruberi]
Length = 454
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 235/475 (49%), Positives = 325/475 (68%), Gaps = 29/475 (6%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LG I+ A++ +++ +ID+ ++E L EI +L+ ADV + V +++ IK +
Sbjct: 1 MVLAELGSRITTALRTINSQAVIDDAAISELLKEIGNSLMAADVNIQQVIQLRNGIKAGL 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ + L G N+R I+ ++ EL +GLQG+GKTTTCTK
Sbjct: 61 DFEKLPKGINRRNHIKAVVYQEL--------------------FFEIGLQGAGKTTTCTK 100
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YA Y+QKKG++ ALVCADTFRAGA +QL+QNA K +I FYG E++PV+IA +GVE FK
Sbjct: 101 YARYYQKKGFRSALVCADTFRAGALEQLRQNAAKVQIAFYGDEYETNPVKIAKDGVEQFK 160
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
E ++IIVDTSGRH QE +LFEEM QVS+A VNPD VIFVMDSSIGQ+ +QA AFK
Sbjct: 161 NEKYEVIIVDTSGRHMQEESLFEEMEQVSQA-VNPDEVIFVMDSSIGQSVKEQAAAFKSR 219
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
VSVG+VIVTK+DGHAKGGGALSAVAATKSP+ FIGTGE D F+ F+ + FVSRLLG GD
Sbjct: 220 VSVGSVIVTKLDGHAKGGGALSAVAATKSPITFIGTGEDFDNFQQFNAESFVSRLLGQGD 279
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
+ + E V +QP++ +++G +T+R M E F +I+KMGP+ QV SM+PGFS +
Sbjct: 280 LKTLLTTVQEAVDPTKQPQMFDNIAKGIYTIRDMREHFTSIMKMGPLSQVMSMIPGFSEQ 339
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMN-DSRIMRIARGSGRQVREVME 418
L+PKG E+ES A++K+Y+T+MDSM + E+D ++ KL N SRIMRIARGSGR ++V E
Sbjct: 340 LLPKGSEQESNARLKKYLTIMDSMNDTEMDCTDITKLPNMQSRIMRIARGSGRTPKDVQE 399
Query: 419 MLEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQIGGVGG 473
+LE++K + ++K L ++ + + Q +SK LP + +G + G
Sbjct: 400 LLEQFKVFQSMIGRVKDLN------LANMKSPKDLQKLSKNLPNTLKGDLGSMFG 448
>gi|118355606|ref|XP_001011062.1| SRP54-type protein, GTPase domain containing protein [Tetrahymena
thermophila]
gi|89292829|gb|EAR90817.1| SRP54-type protein, GTPase domain containing protein [Tetrahymena
thermophila SB210]
Length = 460
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 219/433 (50%), Positives = 316/433 (72%), Gaps = 5/433 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ D+++LN+ L +I ALLQ+D+ K V+++ NI +
Sbjct: 1 MVLNDLGKKINDALSNLNKDYHFDKQLLNKVLKDIQLALLQSDINVKYVKQLSDNILQKC 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N ++ NK+++IQQ + EL KMLDP K F+ K GKP+V+MFVGLQG+GKTTTC K
Sbjct: 61 N--NIEEAVNKKKLIQQLVVQELTKMLDPKKQPFSLKSGKPNVVMFVGLQGAGKTTTCAK 118
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YA Y +KKGW+ L+CADTFRAGAFDQL+Q ATK +IPFYG+ TE+DPV IA+EGV+TF+
Sbjct: 119 YANYWKKKGWRTCLICADTFRAGAFDQLQQIATKIRIPFYGNRTETDPVAIAIEGVKTFQ 178
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
K+N ++II+DTSGRH QE+ LF+EM+Q+ A V P+ IFVMD S GQA +QAQAFK++
Sbjct: 179 KQNFEVIIIDTSGRHMQESELFDEMKQIYSA-VCPNECIFVMDGSNGQACLNQAQAFKKA 237
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V VG+VI+TK+DGH+KGGGALSAVAAT+SP+IF+GTGEH D+ E F + FV RLLG+GD
Sbjct: 238 VDVGSVIITKLDGHSKGGGALSAVAATESPIIFLGTGEHFDDLETFKAESFVKRLLGLGD 297
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
+ G ++ + EV+ ++ Q + ++++++G FTLR + + +++ILKMG + Q SM+PG +
Sbjct: 298 FKGMIETVSEVIDLESQQQNIKQIAKGQFTLRALQQNYKSILKMGSLNQFMSMIPGMQNI 357
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEML 420
+ + EKE KIK+ +T+MDSM+N+ELD + ++ RI++GSG+ + V ++
Sbjct: 358 IQGQISEKEQINKIKKSLTIMDSMSNDELDGITQ--ITQKQLFRISKGSGQPIENVKLLI 415
Query: 421 EEYKRLAKIWSKM 433
+E K AK K+
Sbjct: 416 DEQKTFAKTLKKI 428
>gi|346321519|gb|EGX91118.1| signal recognition particle 54 kDa protein [Cordyceps militaris
CM01]
Length = 536
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 226/436 (51%), Positives = 316/436 (72%), Gaps = 5/436 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ +DEK + + EI ALL+ADV +LV +++ +IK V
Sbjct: 1 MVLQDLGRRINSAVTNLTREQNLDEKAFDAMIKEICSALLEADVNVRLVGQLRKSIKSTV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N +D+ NK+R+IQ+A+F+EL K++DP F PKKGKP+VIMFVGLQG+GKTTTCTK
Sbjct: 61 NFNDIPPAVNKKRLIQKAVFDELVKLVDPHAEPFKPKKGKPNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G++ LVCADTFRAGAFDQLKQNATKAKIP+YGS TE+DP +A GVE FK
Sbjct: 121 LARHYQTRGFRACLVCADTFRAGAFDQLKQNATKAKIPYYGSLTETDPAAVARAGVEQFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KE D+IIVDTSGRH+QE+ALF+EM + EA + PD I V+D+SIGQ A QA+AFK++
Sbjct: 181 KEKFDIIIVDTSGRHRQESALFQEMVDIQEA-IKPDETIMVLDASIGQQAESQAKAFKEA 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
GA+I+TK DGHA GGGA+SAVAAT +P++FIGTGEHM + E F + FV +LLGMGD
Sbjct: 240 ADFGAIIITKTDGHAHGGGAISAVAATHTPIVFIGTGEHMLDLERFAPQQFVQKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
+G ++ + + ++QQ + ++ + EG FT+R + +Q NI+KMGP+ ++ M+PG S+
Sbjct: 300 IAGLVEHVQS-LNLNQQ-DTMKNIQEGIFTIRNLRDQLSNIMKMGPLSKMAGMIPGMSN- 356
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEM 419
+M ++E AK+KR + + DSMT +ELDS L++ +R+ RIARGSG VRE+ ++
Sbjct: 357 MMQGMDDEEGGAKLKRMIYICDSMTEKELDSDGKILIDQPTRMTRIARGSGTSVREIEDL 416
Query: 420 LEEYKRLAKIWSKMKG 435
L + + +A + KM G
Sbjct: 417 LTQQRMMAGMVKKMGG 432
>gi|401882649|gb|EJT46899.1| signal recognition particle 54 kDa protein [Trichosporon asahii
var. asahii CBS 2479]
Length = 566
Score = 457 bits (1175), Expect = e-126, Method: Compositional matrix adjust.
Identities = 243/507 (47%), Positives = 341/507 (67%), Gaps = 40/507 (7%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG + A+ Q S + +DE ++ + E+ ALL++DV KLV +++ +K V
Sbjct: 1 MVLADLGARLHGALNQFSKTSSVDETAIDALVKELCAALLESDVNVKLVSQLRAKVKAKV 60
Query: 61 --NLDDL--AAGH--NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGK 114
NL+D A G NK+ +Q+A+F+EL ++DPG + P KGK +VIM VG+QG+GK
Sbjct: 61 KRNLEDAEKAGGREVNKKNAVQKAVFDELVALVDPGTEPYKPVKGKVNVIMAVGIQGAGK 120
Query: 115 TTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVE 174
TTTCTK A ++Q++G++ LVCADTFRAGAFDQLKQNATKAKIPF+GSYTE+DPV IA +
Sbjct: 121 TTTCTKLAVHYQRRGFRTCLVCADTFRAGAFDQLKQNATKAKIPFFGSYTETDPVTIAYQ 180
Query: 175 GVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQA 234
GVE F+KE D+IIVDTSGRHKQE+ LFEEM +S+A V PD+ + V+D+SIGQAA Q+
Sbjct: 181 GVEKFRKERFDVIIVDTSGRHKQESELFEEMVSISKA-VKPDMTVMVLDASIGQAAEGQS 239
Query: 235 QAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSR 294
+AFK S G++IVTK+DGHAKGGGA+SAVAATK+P+IF+GTGEH+++ E F +PF+S+
Sbjct: 240 RAFKDSSDFGSIIVTKLDGHAKGGGAISAVAATKTPIIFLGTGEHLNDLEKFAPQPFISK 299
Query: 295 LLGMGDWSGFMDKIHEVVPM--DQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFS 352
LLGMGD G M+ + ++ D Q +L +KL EG FT+R +Q NI+ MG + ++ S
Sbjct: 300 LLGMGDIQGLMEHMQDMARANPDGQKDLAKKLGEGKFTIRDWKDQLSNIMNMGSLSKIAS 359
Query: 353 MLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQ 412
M+PG S +M +G E+E+ AK+KR + + D+M +ELDS D I R+A+GSG
Sbjct: 360 MVPGMSG-MMEQGGEEEAAAKLKRMIFITDAMRTDELDS-------DGLIFRVAQGSGTS 411
Query: 413 VREVMEMLEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNA-----------------QH 455
VREV E+L + + +A + + G + G MSA+ + A Q
Sbjct: 412 VREVEELLAQARMMAGMARQAGG----QNGWMSAMQKMQAAAGGKPLGPNGMPSQQQIQA 467
Query: 456 MSKVLPQGMLKQI--GGVGGLQNLMKQ 480
M +P +LK++ G GG Q +M +
Sbjct: 468 MRNAMPPELLKKLRAAGPGGAQKMMAE 494
>gi|400597588|gb|EJP65318.1| signal recognition particle protein SRP54 [Beauveria bassiana ARSEF
2860]
Length = 529
Score = 456 bits (1172), Expect = e-125, Method: Compositional matrix adjust.
Identities = 225/436 (51%), Positives = 315/436 (72%), Gaps = 5/436 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ +DEK + + EI ALL+ADV +LV +++ +IK V
Sbjct: 1 MVLQDLGRRINSAVTNLTREQNLDEKAFDAMIKEICAALLEADVNVRLVGQLRKSIKSTV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N D+ NK+R+IQ+A+F+EL K++DP F PKKGKP+VIMFVGLQG+GKTTTCTK
Sbjct: 61 NFKDIPPAVNKKRLIQKAVFDELVKLVDPHAEPFKPKKGKPNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G++ LVCADTFRAGAFDQLKQNATKAKIP+YGS TE+DP +A GVE FK
Sbjct: 121 LARHYQTRGFRSCLVCADTFRAGAFDQLKQNATKAKIPYYGSLTETDPAAVARAGVEQFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KE D+IIVDTSGRH+QE+ALF+EM + EA + PD + V+D+SIGQ A QA+AFK++
Sbjct: 181 KEKFDIIIVDTSGRHRQESALFQEMVDIQEA-IKPDETVMVLDASIGQQAESQAKAFKEA 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
GA+I+TK DGHA GGGA+SAVAAT +P++FIGTGEHM + E F + FV +LLGMGD
Sbjct: 240 ADFGAIIITKTDGHAHGGGAISAVAATHTPIVFIGTGEHMLDLERFAPQQFVQKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
+G ++ + + ++QQ + ++ + EG FT+R + +Q NI+KMGP+ ++ M+PG S+
Sbjct: 300 IAGLVEHVQS-LNLNQQ-DTMKNIQEGIFTIRNLRDQLSNIMKMGPLSKMAGMIPGMSN- 356
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEM 419
+M ++E AK+KR + + DSMT +ELDS L+ + +R+ RIARGSG VRE+ ++
Sbjct: 357 MMQGMDDEEGGAKLKRMIYICDSMTEKELDSDGKILIEEPTRMTRIARGSGTSVREIEDL 416
Query: 420 LEEYKRLAKIWSKMKG 435
L + + +A + KM G
Sbjct: 417 LTQQRMMAGMVKKMGG 432
>gi|408393475|gb|EKJ72739.1| hypothetical protein FPSE_07139 [Fusarium pseudograminearum CS3096]
Length = 528
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 228/436 (52%), Positives = 313/436 (71%), Gaps = 5/436 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ +DEK + L EI ALL+ADV KLV +++ +IK V
Sbjct: 1 MVLQDLGRRINAAVTNLTREQNLDEKAFDGMLKEICAALLEADVNVKLVGQLRKSIKTTV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N +L NK+R+IQ+A+F+EL K++DP F PKKGK +VIMFVGLQG+GKTTTCTK
Sbjct: 61 NFKELPPAVNKKRLIQKAVFDELVKLVDPHAEPFRPKKGKSNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G+K LVCADTFRAGAFDQLKQNATKAKIP+YGS TE+DP +A GV+ FK
Sbjct: 121 LARHYQSRGFKACLVCADTFRAGAFDQLKQNATKAKIPYYGSLTETDPAEVARAGVDQFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KE ++IIVDTSGRH+QE+ALF+EM + EA + PD I V+D+SIGQ A QA+AFK++
Sbjct: 181 KERFEVIIVDTSGRHRQESALFQEMVDIQEA-IKPDETIMVLDASIGQQAESQAKAFKEA 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
GA+I+TK DGHA GGGA+SAVAAT +P++FIGTGEHM +FE F + FV +LLGMGD
Sbjct: 240 ADFGAIIITKTDGHAHGGGAISAVAATHTPIVFIGTGEHMLDFEKFAPQQFVQKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
+G M+ + + Q + ++ + EG FT+R + +Q NI+KMGP+ ++ M+PG S+
Sbjct: 300 MAGLMEHVQSLNL--NQKDTIKHIQEGIFTVRDLRDQLSNIMKMGPLSKMAGMIPGMSN- 356
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEM 419
+M ++E AK+KR + + DSMT++ELDS L++ +R+ RIARGSG VREV ++
Sbjct: 357 MMQGMDDEEGGAKLKRMIYICDSMTDKELDSDGKILIDQPTRMTRIARGSGTSVREVEDL 416
Query: 420 LEEYKRLAKIWSKMKG 435
L + + +A + KM G
Sbjct: 417 LTQQRMMAGMAKKMGG 432
>gi|388581255|gb|EIM21564.1| signal recognition particle protein [Wallemia sebi CBS 633.66]
Length = 561
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 237/498 (47%), Positives = 338/498 (67%), Gaps = 20/498 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG ++ A+ + + +IDEK L+ L EI++ALL++D+ KLV ++ +K
Sbjct: 1 MVLAGLGRQLNSALNSFNKSQVIDEKTLDGLLKEISKALLESDINVKLVGNLRNRVKTRA 60
Query: 61 ---NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTT 117
D A+G+ +++I+Q+AIF+EL ++DP + + P KGK ++IM VGLQG+GKTT+
Sbjct: 61 LKEFKDTNASGNQQKQIVQKAIFDELVALVDPQEEPYKPTKGKTNIIMAVGLQGAGKTTS 120
Query: 118 CTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVE 177
CTK A ++Q+KG+K LVCADTFRAGAFDQLKQNATKAKIPFYGSYTE+DPV I+ GV+
Sbjct: 121 CTKLAVHYQRKGFKVGLVCADTFRAGAFDQLKQNATKAKIPFYGSYTETDPVVISEAGVQ 180
Query: 178 TFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAF 237
FKK D+IIVDTSGRHKQE LFEEMR +S+A V P + + VMD ++GQAA QA AF
Sbjct: 181 QFKKSKFDVIIVDTSGRHKQEEDLFEEMRMISQA-VKPHMTVLVMDGAMGQAAESQASAF 239
Query: 238 KQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLG 297
K+S GA+IVTKMDGHAKGGGA+SAVAATK+P+IFIGTGE++ + + F +PFV +LLG
Sbjct: 240 KESSDFGAIIVTKMDGHAKGGGAISAVAATKTPIIFIGTGENLHDIDTFRPRPFVQQLLG 299
Query: 298 MGDWSGFMDKIHEVV--PMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLP 355
MGD G ++ + +V D+Q EL +K +G+ ++R EQ +N+ K+GPI ++ M+P
Sbjct: 300 MGDMQGLLEHVQDVAMSDPDKQKELAKKFEQGSLSIRDWAEQIKNVTKLGPISKIAGMIP 359
Query: 356 GFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMN----------DSRIMRI 405
G +++++ +G + E+ +IKR + + DSMT +ELDS+ + R +R+
Sbjct: 360 GLNADMIGQGGDDEASKRIKRMLFITDSMTEKELDSNGTIFLRKGKDGKFVGMSRRALRV 419
Query: 406 ARGSGRQVREVMEMLEEYKRL-AKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGM 464
ARGSG VREV E+L +Y + + I + MKG K + Q M K++P +
Sbjct: 420 ARGSGTSVREVEELLVQYTMMKSGILNMMKGQAGGMKPGQPGMPSRDQIQQMQKMMPPQL 479
Query: 465 LKQIGGVGG---LQNLMK 479
L+++ GG LQ L +
Sbjct: 480 LQKLRSGGGPEILQQLQR 497
>gi|390597902|gb|EIN07301.1| signal recognition particle protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 562
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 241/513 (46%), Positives = 340/513 (66%), Gaps = 34/513 (6%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG ++ A+ +S A ++DEKVL+ L +I ALL++DV KLV ++++ ++ V
Sbjct: 1 MVLADLGRKLNAALSSLSRAPVVDEKVLDATLKDICAALLESDVNVKLVSQLRSKVRAKV 60
Query: 61 NLD----DLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTT 116
D N+R ++Q+A+F+EL ++DPG + PKKG+ +VIM VGLQG+GKTT
Sbjct: 61 KASLESGDKVKDQNRRTVLQKAVFDELVNLVDPGVEPYKPKKGQSNVIMAVGLQGNGKTT 120
Query: 117 TCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGV 176
TCTK A ++QK+G+K +VCADTFRAGAFDQ +Q+ATKAK+ ++GSYTE+DPV IA +GV
Sbjct: 121 TCTKLAVHYQKRGFKSCIVCADTFRAGAFDQTRQSATKAKVAYFGSYTETDPVAIAAQGV 180
Query: 177 ETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQA 236
FKKE ++IIVDTSGRHKQE+ LF+EM Q+ EA V P++ I V+D+SIGQAA QA+A
Sbjct: 181 TKFKKERFEVIIVDTSGRHKQESELFQEMVQIGEA-VKPNMTILVLDASIGQAAEAQARA 239
Query: 237 FKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLL 296
FK S GA+IVTKMDGHAKGGGA+SAVAATK+P+IF+G GEH+ + + F +PF+S+LL
Sbjct: 240 FKDSADFGAIIVTKMDGHAKGGGAISAVAATKTPIIFLGVGEHLADLDRFSPQPFISKLL 299
Query: 297 GMGDWSGFMDKIHEVVPM--DQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSML 354
G+GD G M+ + ++ D+Q E+ +KL EG ++R EQ NI+ MGPI ++ SM+
Sbjct: 300 GLGDMQGLMEHMQDLAQANPDKQKEIAKKLEEGKLSIRDWREQISNIMNMGPISKIASMI 359
Query: 355 PGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMN----------DSRIMR 404
PG E++ G E E ++KR + + DSMT ELDS M R+ R
Sbjct: 360 PGIPQEMLAGGDE-EGTNRMKRMIFITDSMTASELDSDGSPFMEFGKDGKPVGITWRVTR 418
Query: 405 IARGSGRQVREVMEMLEEYKRLAKIWSKMKG----LKIPKKGEMSA--LSRNMNA----- 453
+ARGSG VREV E+L +Y+ +A + + G L+ +K + +A R N
Sbjct: 419 VARGSGTSVREVEELLCQYRMMANMAKQAGGKNGWLQTMQKMQQAAGGKGRGPNGMPTPA 478
Query: 454 --QHMSKVLPQGMLKQIG---GVGGLQNLMKQM 481
Q M + +P GML+Q+ GG+ +MK M
Sbjct: 479 QIQAMQRSMPPGMLQQMQRQMRSGGMAEMMKAM 511
>gi|367023521|ref|XP_003661045.1| hypothetical protein MYCTH_2299988 [Myceliophthora thermophila ATCC
42464]
gi|347008313|gb|AEO55800.1| hypothetical protein MYCTH_2299988 [Myceliophthora thermophila ATCC
42464]
Length = 519
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 228/458 (49%), Positives = 326/458 (71%), Gaps = 5/458 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ A +DEK + L +I ALL+ADV +LV +++ +I+ V
Sbjct: 1 MVLQDLGRRINAAVSDLTRAPNLDEKAFDSMLKQICSALLEADVNVRLVGQLRKSIRSTV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N +L NK+R+IQ+A+F+EL +++DP F PKKGK +VIMFVGLQG+GKTTTCTK
Sbjct: 61 NFKELPPAVNKKRLIQKAVFDELVRLVDPHAEPFRPKKGKSNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A Y+Q +G++ LVCADTFRAGAFDQLKQNATKAKIP+YGS TE+DP +A +GVE FK
Sbjct: 121 LARYYQSRGFRACLVCADTFRAGAFDQLKQNATKAKIPYYGSLTETDPAVVARDGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KE ++IIVDTSGRH+QE+ALF+EM + +A + PD I V+D+SIGQ A QA+AFK++
Sbjct: 181 KERFEVIIVDTSGRHRQESALFQEMVDI-QAAIKPDETIMVLDASIGQQAEAQAKAFKEA 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
GA+I+TK DGHA GGGA+SAVAAT +P++FIGTGEHM + E F + F+S+LLGMGD
Sbjct: 240 ADFGAIIITKTDGHAAGGGAISAVAATHTPIVFIGTGEHMLDLERFVPRNFISKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
+G ++ + + +DQ+ E ++ +SEG FT+R + +Q QNI+KMGP+ ++ M+PG S+
Sbjct: 300 MAGLVEHVQS-LKLDQK-ETIKHISEGIFTIRDLRDQLQNIMKMGPLSKMAGMIPGMSN- 356
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEM 419
+M ++E K+KR + + DSMT++ELDS + +R+ R+ARGSG VREV ++
Sbjct: 357 MMQGMDDEEGSLKLKRMIYICDSMTDKELDSDGKIFIEQPTRMTRVARGSGTTVREVEDL 416
Query: 420 LEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMS 457
L + + +A + KM G + SA++ AQ ++
Sbjct: 417 LTQQRMMAGMAKKMGGNMKNMQRAQSAMAGGNKAQQLA 454
>gi|392574127|gb|EIW67264.1| hypothetical protein TREMEDRAFT_72197 [Tremella mesenterica DSM
1558]
Length = 584
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 243/519 (46%), Positives = 349/519 (67%), Gaps = 45/519 (8%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG + A+ Q+S A ++D++VL+ L E+T ALL++DV KLV ++ +K V
Sbjct: 1 MVLADLGARLHGALSQLSRAPVVDDQVLDALLKELTAALLESDVNVKLVASLRNKVKTKV 60
Query: 61 --NLDDLAAGH----NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGK 114
+L++ AA N++ ++Q+A+F+EL ++DPG + P KGK +V+M VG+QG+GK
Sbjct: 61 KKSLEESAAAGGREVNRKNVVQKAVFDELVALVDPGVEPYKPIKGKANVLMAVGIQGAGK 120
Query: 115 TTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVE 174
TTTCTK A ++Q++G++ LVCADTFRAGAFDQLKQNATKAKIPFYGSYTE+DPV IA
Sbjct: 121 TTTCTKLAVHYQRRGFRTCLVCADTFRAGAFDQLKQNATKAKIPFYGSYTETDPVAIASL 180
Query: 175 GVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQA 234
GVE F+KE ++IIVDTSGRHKQE+ LFEEM +S A V PD+ I V+D+SIGQAA Q+
Sbjct: 181 GVEKFRKERFEVIIVDTSGRHKQESELFEEMVAISNA-VKPDMTIMVLDASIGQAAEGQS 239
Query: 235 QAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSR 294
+AFK S GA+IVTK+DGHAKGGGA+SAVAATK+P+IF+GTGEHM++ E F +PFVS+
Sbjct: 240 RAFKDSADFGAIIVTKLDGHAKGGGAISAVAATKTPIIFLGTGEHMNDLERFAPQPFVSK 299
Query: 295 LLGMGDWSGFMDKIHEVVPM--DQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFS 352
LLGMGD G M+ + ++ ++Q E+ +KL +G F+LR EQ +I+ MG + ++ S
Sbjct: 300 LLGMGDMQGLMEHMQDMARANPERQKEMAKKLEQGKFSLRDWREQLSSIMNMGSLSKIAS 359
Query: 353 MLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSS-----------NPKLMNDSR 401
M+PG + +M G E+E+ K+KR M + D+M +ELDS +P +N R
Sbjct: 360 MIPGLPAGVM-DGSEEEATMKMKRLMFITDAMRQDELDSDGLIFFSFDKAGHPVGLN-RR 417
Query: 402 IMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNA-------- 453
R+ARGSG +REV E+L + + +A + + G + G MSA+ + A
Sbjct: 418 ARRVARGSGTSLREVEELLAQARMMAGMARQAGG----QNGWMSAMQKMQAAAGGKPLGP 473
Query: 454 ---------QHMSKVLPQGMLKQIGGVG--GLQNLMKQM 481
+ M + +P M++++ +G G Q +M++M
Sbjct: 474 NGQPSPAQIEAMRRAMPPEMMRKLRSMGPHGAQKMMQEM 512
>gi|322695331|gb|EFY87141.1| signal recognition particle 54 kDa protein [Metarhizium acridum
CQMa 102]
Length = 522
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 226/436 (51%), Positives = 311/436 (71%), Gaps = 5/436 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ +DEK + L EI ALL+ADV KLV +++ +IK V
Sbjct: 1 MVLQDLGRRINAAVTNLTRDQNLDEKAFDNMLKEICSALLEADVNVKLVMQLRKSIKSTV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N DL NK+R+IQ+A+F+EL +++DP F PKKGKP+VIMFVGLQG+GKTTTCTK
Sbjct: 61 NFKDLPPAVNKKRLIQKAVFDELVQLVDPHAEPFKPKKGKPNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G++ LVCADTFRAGAFDQLKQNATKAKIP+YGS TE+DP +A GV+ FK
Sbjct: 121 LARHYQTRGFRACLVCADTFRAGAFDQLKQNATKAKIPYYGSLTETDPAAVARAGVDQFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KE D+IIVDTSGRH+QE+ALF+EM + A + PD I V+D+SIGQ A QA+AFK++
Sbjct: 181 KEKFDVIIVDTSGRHRQESALFQEMIDIQTA-IRPDETIMVLDASIGQQAESQAKAFKEA 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
GA+I+TK DGHA GGGA+SAVAAT +P++FIGTGEHM + E F + FV +LLGMGD
Sbjct: 240 ADFGAIIITKTDGHAHGGGAISAVAATHTPIVFIGTGEHMLDLERFAPQQFVQKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
+G ++ + + Q + ++ + EG FT+R + +Q NI+KMGP+ ++ M+PG S+
Sbjct: 300 MAGLVEHVQSLNL--NQKDTIKHIQEGIFTVRDLRDQLSNIMKMGPLSKMAGMIPGMSN- 356
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEM 419
+M ++E AK+KR + + DSMT++ELDS L+ +R+ RIARGSG VREV ++
Sbjct: 357 MMQGMDDEEGSAKLKRMIYICDSMTDKELDSDGKILIEQPTRMTRIARGSGTSVREVEDL 416
Query: 420 LEEYKRLAKIWSKMKG 435
L + + +A + KM G
Sbjct: 417 LTQQRMMAGMAKKMGG 432
>gi|367036313|ref|XP_003648537.1| hypothetical protein THITE_2106112 [Thielavia terrestris NRRL 8126]
gi|346995798|gb|AEO62201.1| hypothetical protein THITE_2106112 [Thielavia terrestris NRRL 8126]
Length = 521
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 228/458 (49%), Positives = 327/458 (71%), Gaps = 5/458 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ A +DEK + L +I ALL+ADV +LV +++ +I+ V
Sbjct: 1 MVLQDLGRRINAAVSDLTRAPNLDEKAFDSMLKQICSALLEADVNVRLVGQLRKSIRATV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N +L NK+R+IQ+A+F+EL +++DP F PKKGK +VIMFVGLQG+GKTTTCTK
Sbjct: 61 NFKELPPAVNKKRLIQKAVFDELVRLVDPHAEPFKPKKGKANVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G++ LVCADTFRAGAFDQLKQNATKAKIP+YGS TE+DP +A +GVE FK
Sbjct: 121 LARHYQSRGFRACLVCADTFRAGAFDQLKQNATKAKIPYYGSLTETDPAVVARDGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KE ++IIVDTSGRH+QE+ALF+EM + +A + PD I V+D+SIGQ A QA+AFK++
Sbjct: 181 KERFEVIIVDTSGRHRQESALFQEMVDI-QAAIRPDETIMVLDASIGQQAEAQAKAFKEA 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
GA+I+TK DGHA GGGA+SAVAAT +P++FIGTGEHM + E F + F+S+LLGMGD
Sbjct: 240 ADFGAIIITKTDGHAAGGGAISAVAATHTPIVFIGTGEHMLDLERFVPRNFISKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
+G ++ + + +DQ+ E ++ +SEG FT+R + +Q QNI+KMGP+ ++ M+PG S+
Sbjct: 300 MAGLVEHVQS-LKLDQK-ETIKHISEGIFTIRDLRDQLQNIMKMGPLSKMAGMIPGMSN- 356
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEM 419
+M ++E K+KR + + DSMT++ELDS ++ +R+ R+ARGSG VREV ++
Sbjct: 357 MMQGMDDEEGSLKLKRMIYICDSMTDKELDSDGKIFIDQPTRMTRVARGSGTTVREVEDL 416
Query: 420 LEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMS 457
L + + +A + KM G + SAL+ AQ ++
Sbjct: 417 LTQQRMMAGMAKKMGGNMKNMQRAQSALAGGNKAQQLA 454
>gi|320583360|gb|EFW97575.1| Signal recognition particle protein [Ogataea parapolymorpha DL-1]
Length = 530
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 232/465 (49%), Positives = 330/465 (70%), Gaps = 7/465 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A+ +++ A ++D+ ++ L EI+ AL++ADV KLV ++ +K +
Sbjct: 1 MVLADLGKRINSAVSEVTKANVVDQTAVDGLLKEISNALIEADVNVKLVLNLRKKLKSTI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPS-FTPKKGKPSVIMFVGLQGSGKTTTCT 119
++ G NK+++IQ+A+F+ELC ++D + + PKK K +VIMFVGLQG+GKTTTCT
Sbjct: 61 EQEE-KPGVNKKKLIQKAVFDELCDLVDCKETELYKPKKKKTNVIMFVGLQGAGKTTTCT 119
Query: 120 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
K A Y+Q++G+K +VCADTFRAGAFDQLKQNATKAKIP+YGSYTE+DPV++A +GVE F
Sbjct: 120 KLAVYYQRRGFKVGMVCADTFRAGAFDQLKQNATKAKIPYYGSYTEADPVKVASDGVEKF 179
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQ 239
KKE ++IIVDTSGRH+QE+ LF EM Q+ EA V P+ I V+D+SIGQAA Q++AFK+
Sbjct: 180 KKEKFEIIIVDTSGRHRQESELFAEMIQIGEA-VQPNQTIMVLDASIGQAAESQSRAFKE 238
Query: 240 SVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMG 299
S + GA+I+TKMDGHAKGGGA+SAVAAT +P+ FIGTGEH+++ E F + FVS+LLG+G
Sbjct: 239 SSNFGAIILTKMDGHAKGGGAISAVAATHTPIAFIGTGEHINDLESFTPRQFVSKLLGIG 298
Query: 300 DWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSS 359
D G M+ + + +DQ+ + ++ EG FTLR + Q NILKMGP+ ++ MLPG
Sbjct: 299 DIQGLMEHVQS-LNLDQK-DTIKNFQEGKFTLRDLQTQMNNILKMGPLSKIAQMLPGGIG 356
Query: 360 ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVME 418
E+M + E+E+ + KR + +MDSMT +ELDS ++ SRI+R+ARGSG V EV
Sbjct: 357 EMMNQVGEEETSKRFKRMVYVMDSMTKQELDSDGDIFVDQPSRIVRVARGSGTSVTEVEA 416
Query: 419 MLEEYKRLAKIWSKMKGLKIPKKGEMSALSRNM-NAQHMSKVLPQ 462
+L + K A++ K ++ M+ M N Q+M + + Q
Sbjct: 417 VLMQQKMFARMAQTTKSMQQGGANPMAGGRGGMFNPQNMQRAMQQ 461
>gi|116200506|ref|XP_001226065.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88175512|gb|EAQ82980.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 512
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 226/437 (51%), Positives = 317/437 (72%), Gaps = 7/437 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ A +DEK + L I ALL+ADV +LV +++ +I+ V
Sbjct: 1 MVLQDLGRRINAAVNDLTRAPNLDEKTFDSMLKTICSALLEADVNVRLVGQLRKSIRSTV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N DL NK+R+IQ+A+++EL ++DP F PKKGK +VIMFVGLQG+GKTTTCTK
Sbjct: 61 NFKDLPPAVNKKRLIQKAVYDELVSLVDPHAEPFKPKKGKSNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G++ LVCADTFRAGAFDQLKQNATKAKIP+YGS TE+DP +A EGVE FK
Sbjct: 121 LARHYQSRGFRACLVCADTFRAGAFDQLKQNATKAKIPYYGSLTETDPTVVAREGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KE ++IIVDTSGRH+QE+ALF+EM + A + PD I V+D+SIGQ A QA+AFK++
Sbjct: 181 KERFEIIIVDTSGRHRQESALFQEMTDIQTA-IKPDETIMVLDASIGQQAEAQAKAFKEA 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
GA+I+TK DGHA GGGA+SAVAAT +P++FIGTGEHM +FE F + F+S+LLGMGD
Sbjct: 240 ADFGAIIITKTDGHAAGGGAISAVAATHTPIVFIGTGEHMFDFERFVPRSFISKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
+G ++ + + +DQ+ E ++ +SEG FT+R + +Q QNI+KMGP+ ++ SM+PG +
Sbjct: 300 MAGLVEHVQS-LKLDQK-ETIKHISEGVFTVRDLRDQLQNIMKMGPLSKMASMIPGMGN- 356
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND--SRIMRIARGSGRQVREVME 418
++ + E K+KR + + DSMT++ELD S+ KL + +R+ R+ARGSG VREV +
Sbjct: 357 MLQGMDDDEGSLKLKRMIYICDSMTDKELD-SDGKLFTEQPTRMTRVARGSGTTVREVED 415
Query: 419 MLEEYKRLAKIWSKMKG 435
+L + + +A + KM G
Sbjct: 416 LLTQQRMMAGMAKKMGG 432
>gi|320587877|gb|EFX00352.1| signal recognition particle protein srp54 [Grosmannia clavigera
kw1407]
Length = 530
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 225/436 (51%), Positives = 319/436 (73%), Gaps = 5/436 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ A IDEK + L EI AL++ADV KLV +++ +IK V
Sbjct: 1 MVLQDLGRRINAAVSDLTRAPNIDEKAFDSMLKEIGNALVEADVNVKLVAQLRKSIKGTV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N DL NK+R+IQ+A+F+EL +++DP F PKKGK +VIMFVGLQG+GKTT+CTK
Sbjct: 61 NFKDLPPAVNKKRLIQKAVFDELVQLVDPHSEPFKPKKGKTNVIMFVGLQGAGKTTSCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G++ LVCADTFRAGAFDQLKQNATKAKIP+YGS TE+DP +A +GVE FK
Sbjct: 121 LARHYQSRGFQACLVCADTFRAGAFDQLKQNATKAKIPYYGSLTETDPAVVARDGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KE D+IIVDTSGRH+QE+ALF+EM + EA V PD I V+D++IGQ A QA+AFK++
Sbjct: 181 KERFDIIIVDTSGRHRQESALFQEMIDIQEA-VKPDETIMVLDATIGQQAEAQAKAFKEA 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
GA+I+TK DGHAKGGGA+SAVAAT++P++F+GTGEHM + E F + F+ +LLGMGD
Sbjct: 240 ADFGAIIITKTDGHAKGGGAISAVAATRTPIVFLGTGEHMLDLERFAPQQFIQKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
+G ++ + + +DQ+ + ++ ++EG FT+R + +Q QNI+KMGP+ ++ M+PG S+
Sbjct: 300 MTGLIEHVQS-LKLDQK-DTIKHITEGIFTVRDLRDQLQNIMKMGPLSKMAGMIPGMSN- 356
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEM 419
+M ++E K+KR + + DSMT++ELDS ++ SR+ R+A+GSG VREV ++
Sbjct: 357 MMSGMDDEEGSLKLKRMIYICDSMTDKELDSDGRLFLDQPSRMTRVAKGSGTFVREVEDL 416
Query: 420 LEEYKRLAKIWSKMKG 435
L + + +A + KM G
Sbjct: 417 LTQQRMMAGMAKKMGG 432
>gi|322712654|gb|EFZ04227.1| signal recognition particle 54 kDa protein [Metarhizium anisopliae
ARSEF 23]
Length = 522
Score = 454 bits (1167), Expect = e-125, Method: Compositional matrix adjust.
Identities = 226/436 (51%), Positives = 311/436 (71%), Gaps = 5/436 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ +DEK + L EI ALL+ADV KLV +++ +IK V
Sbjct: 1 MVLQDLGRRINAAVTNLTRDQNLDEKAFDNMLKEICAALLEADVNVKLVMQLRKSIKSTV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N DL NK+R+IQ+A+F+EL +++DP F PKKGKP+VIMFVGLQG+GKTTTCTK
Sbjct: 61 NFKDLPPAVNKKRLIQKAVFDELVQLVDPHAEPFKPKKGKPNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G++ LVCADTFRAGAFDQLKQNATKAKIP+YGS TE+DP +A GV+ FK
Sbjct: 121 LARHYQTRGFRACLVCADTFRAGAFDQLKQNATKAKIPYYGSLTETDPAAVARAGVDQFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KE D+IIVDTSGRH+QE+ALF+EM + A + PD I V+D+SIGQ A QA+AFK++
Sbjct: 181 KEKFDVIIVDTSGRHRQESALFQEMIDIQTA-IRPDETIMVLDASIGQQAESQAKAFKEA 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
GA+I+TK DGHA GGGA+SAVAAT +P++FIGTGEHM + E F + FV +LLGMGD
Sbjct: 240 ADFGAIIITKTDGHAHGGGAISAVAATHTPIVFIGTGEHMLDLERFAPQQFVQKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
+G ++ + + Q + ++ + EG FT+R + +Q NI+KMGP+ ++ M+PG S+
Sbjct: 300 MAGLVEHVQSLNL--NQKDTIKHIQEGIFTVRDLRDQLSNIMKMGPLSKMAGMIPGMSN- 356
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEM 419
+M ++E AK+KR + + DSMT++ELDS L+ +R+ RIARGSG VREV ++
Sbjct: 357 MMQGMDDEEGSAKLKRMIYICDSMTDKELDSDGKILIEQPTRMTRIARGSGTSVREVEDL 416
Query: 420 LEEYKRLAKIWSKMKG 435
L + + +A + KM G
Sbjct: 417 LTQQRMMAGMAKKMGG 432
>gi|353227294|emb|CCA77807.1| probable signal recognition particle subunit SRP54 [Piriformospora
indica DSM 11827]
Length = 563
Score = 454 bits (1167), Expect = e-125, Method: Compositional matrix adjust.
Identities = 228/466 (48%), Positives = 327/466 (70%), Gaps = 24/466 (5%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLV----REMQTNI 56
MVLA LG ++ A+ ++ + ++DEKVL+E L EIT+ALL++DV KLV ++++ +
Sbjct: 1 MVLADLGRKLNSALSNLNKSPVVDEKVLDELLKEITKALLESDVNVKLVQTLKKQVKAKV 60
Query: 57 KKIVNLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTT 116
K + D + ++ IIQ+AIF+EL +++DPG + PKKG P+VIM VGLQG+GKTT
Sbjct: 61 KPALESTDKSKEGQRKSIIQKAIFDELVQLVDPGVEPYKPKKGHPNVIMAVGLQGNGKTT 120
Query: 117 TCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGV 176
TCTK A ++QK+G+K +VCADTFRAGAFDQ +Q+ATKAK+ FYGSYTE+DPV IA EGV
Sbjct: 121 TCTKLAVHYQKRGFKCCIVCADTFRAGAFDQTRQSATKAKVHFYGSYTETDPVAIASEGV 180
Query: 177 ETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQA 236
FKKE ++IIVDTSGRH+QE+ LFEEM+Q+ +A V PD+ + V+D+SIGQAA Q++A
Sbjct: 181 AKFKKERFEVIIVDTSGRHRQESELFEEMKQI-QAAVKPDMTVLVLDASIGQAAEAQSRA 239
Query: 237 FKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLL 296
FK+S GA+IVTKMDGHAKGGGA+SAVAATK+P+IF+G GEH+++ + F +PF+S+LL
Sbjct: 240 FKESADFGAIIVTKMDGHAKGGGAISAVAATKTPIIFLGVGEHLNDLDRFSPEPFISQLL 299
Query: 297 GMGDWSGFMDKIHEVVPM--DQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSML 354
GMGD G M+ + ++ D+Q E+ + EG ++R EQ QNI+ MGP+ ++ S +
Sbjct: 300 GMGDLRGLMEHMSDLARQNPDRQKEMTKAFEEGKLSIRDWREQMQNIMSMGPLSKITSKI 359
Query: 355 PGFS---SELMPKGREKESQAKIKRYMTMMDSMTNEELDS----------SNPKLMNDSR 401
PG + L +G ++E+ ++KR + + DSMT ELDS N R
Sbjct: 360 PGMAGLMEGLAGEGTDEEASRRLKRLICITDSMTPAELDSDGMLFLRIGKDNKPTGVTKR 419
Query: 402 IMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLKIPKKGEMSAL 447
++R+A+GSG VREV E+L +++ +A + +M G K G + AL
Sbjct: 420 VLRVAKGSGASVREVEEVLMQHRMMANVAKQMGG----KNGMLQAL 461
>gi|157134401|ref|XP_001663285.1| signal recognition particle 54 kda protein [Aedes aegypti]
gi|108870487|gb|EAT34712.1| AAEL013076-PA [Aedes aegypti]
Length = 401
Score = 453 bits (1165), Expect = e-124, Method: Compositional matrix adjust.
Identities = 228/397 (57%), Positives = 299/397 (75%), Gaps = 20/397 (5%)
Query: 111 GSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVR 170
GSGKTTTCTK AY++QKK WK LVCADTFRAGA+DQ+KQNATKA+IPFYGSYTE DPV
Sbjct: 8 GSGKTTTCTKLAYHYQKKNWKSCLVCADTFRAGAYDQIKQNATKARIPFYGSYTEVDPVV 67
Query: 171 IAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAA 230
IA +GV+ FKKE + IIVDTSGRHKQE +LFEEM V+ A V PD +IFVMD++IGQA
Sbjct: 68 IAQDGVDMFKKEGFEFIIVDTSGRHKQEESLFEEMLAVATA-VKPDNIIFVMDATIGQAC 126
Query: 231 FDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKP 290
QA+AFK+ V +G+VI+TK+DGHAKGGGALSAVAAT SP+IFIGTGEH+D+ E F KP
Sbjct: 127 EAQAKAFKEKVDIGSVIITKLDGHAKGGGALSAVAATNSPIIFIGTGEHIDDLEPFKTKP 186
Query: 291 FVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQV 350
F+S+LLGMGD G +DK++E + +D EL+ K+ G FT+R MYEQFQNI+KMGP Q+
Sbjct: 187 FISKLLGMGDIEGLIDKVNE-LNLDDNEELIDKIKHGQFTIRDMYEQFQNIMKMGPFSQI 245
Query: 351 FSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIAR 407
M+PGFS + M KG E+ES A+IKR MTMMDSM++ ELD+ + KL + +R++R+A+
Sbjct: 246 MGMIPGFSQDFMTKGGEQESMARIKRLMTMMDSMSDGELDNKDGAKLFSKQPTRVIRVAQ 305
Query: 408 GSGRQVREVMEMLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNA-------QHMSKV 459
GSG REV +++ +Y + A + KM G+K + K G+M ++N+N Q M+K+
Sbjct: 306 GSGVTEREVRDLISQYTKFAAVIKKMGGIKGLFKSGDM---TKNVNPTQMAKLNQQMAKM 362
Query: 460 LPQGMLKQIGGVGGLQNLMKQM----GSTKDMMGMFG 492
+ M +Q+GG+ GLQN+M+Q+ G ++MG FG
Sbjct: 363 IDPRMFQQMGGMSGLQNMMRQLQQGAGGLGNLMGGFG 399
>gi|426200103|gb|EKV50027.1| hypothetical protein AGABI2DRAFT_190440 [Agaricus bisporus var.
bisporus H97]
Length = 562
Score = 452 bits (1164), Expect = e-124, Method: Compositional matrix adjust.
Identities = 229/482 (47%), Positives = 326/482 (67%), Gaps = 24/482 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG ++ A+ ++ A ++DEKVL+ L EIT ALL+ DV KLV ++ +K V
Sbjct: 1 MVLADLGRKLNAALSSLNRAPVVDEKVLDVMLKEITAALLETDVNVKLVASLRNKVKHKV 60
Query: 61 ------NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGK 114
N D A N++ + Q+A+F+EL ++DPG + PKKG+ +VIM VGLQG+GK
Sbjct: 61 KALIEQNAGDKAKEMNRKHLTQKAVFDELVSLVDPGVEPYKPKKGQCNVIMLVGLQGNGK 120
Query: 115 TTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVE 174
TTTCTK A ++Q++G+K A+VCADTFRAGAFDQ +Q+AT+AK+ ++GSYTE+DPV IA +
Sbjct: 121 TTTCTKLAVHYQRRGFKSAIVCADTFRAGAFDQTRQSATRAKVAYFGSYTETDPVSIAAQ 180
Query: 175 GVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQA 234
GV FKKE ++IIVDTSGRHKQE+ LF+EM Q+ +A V P++ + V+D+SIGQAA Q+
Sbjct: 181 GVSKFKKERFEVIIVDTSGRHKQESELFQEMVQIGDA-VKPNMTVLVLDASIGQAAETQS 239
Query: 235 QAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSR 294
+AFK S GA+IVTKMDGHAKGGGA+SAVAAT++P+IF+G GEH+ + + F +PFVS+
Sbjct: 240 RAFKDSADFGAIIVTKMDGHAKGGGAISAVAATQTPIIFLGVGEHLHDLDRFSPQPFVSK 299
Query: 295 LLGMGDWSGFMDKIHEVVPM--DQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFS 352
LLG+GD G M+ + ++ D+Q E+ +KL EG ++R EQ QN++ MGPI ++ S
Sbjct: 300 LLGLGDMQGLMEHMQDLATQNPDKQKEMAKKLEEGKLSIRDWREQIQNVMNMGPISKIAS 359
Query: 353 MLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDS----------RI 402
M+PG E++ +G ++E ++KR + + DSMT ELDS M R+
Sbjct: 360 MIPGLPQEML-QGSDEEGSQRMKRMIYITDSMTAGELDSDGSPFMESGKDGKPTGLTWRV 418
Query: 403 MRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQ 462
R+ARGSG VREV E+L +Y+ +A + + G K G + A+ + A P
Sbjct: 419 TRVARGSGTSVREVEELLCQYRMMANMAKQAGG----KNGWLQAMQKVQQAAGSKGRGPN 474
Query: 463 GM 464
GM
Sbjct: 475 GM 476
>gi|342881717|gb|EGU82549.1| hypothetical protein FOXB_06915 [Fusarium oxysporum Fo5176]
Length = 476
Score = 452 bits (1164), Expect = e-124, Method: Compositional matrix adjust.
Identities = 227/436 (52%), Positives = 312/436 (71%), Gaps = 5/436 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ +DEK + L EI ALL+ADV +LV +++ +IK V
Sbjct: 1 MVLQDLGRRINAAVTNLTREQNLDEKAFDGMLKEICAALLEADVNVRLVGQLRKSIKSTV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N +L NK+R+IQ+A+F+EL K++DP F PKKGK +VIMFVGLQG+GKTTTCTK
Sbjct: 61 NFKELPPAVNKKRLIQKAVFDELVKLVDPHAEPFRPKKGKSNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G+K LVCADTFRAGAFDQLKQNATKAKIP+YGS TE+DP +A GV+ FK
Sbjct: 121 LARHYQSRGFKACLVCADTFRAGAFDQLKQNATKAKIPYYGSLTETDPAEVARAGVDQFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KE ++IIVDTSGRH+QE+ALF+EM + EA + PD I V+D+SIGQ A QA+AFK++
Sbjct: 181 KERFEVIIVDTSGRHRQESALFQEMVDIQEA-IKPDETIMVLDASIGQQAESQAKAFKEA 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
GA+I+TK DGHA GGGA+SAVAAT +P++FIGTGEHM +FE F + FV +LLGMGD
Sbjct: 240 ADFGAIIITKTDGHAHGGGAISAVAATHTPIVFIGTGEHMLDFEKFAPQQFVQKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
+G M+ + + Q + ++ + EG FT+R + +Q NI+KMGP+ ++ M+PG S+
Sbjct: 300 MAGLMEHVQSLNL--NQKDTIKHIQEGIFTVRDLRDQLSNIMKMGPLSKMAGMIPGMSN- 356
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEM 419
+M ++E AK+KR + + DSMT++ELDS L+ +R+ RIARGSG VREV ++
Sbjct: 357 MMQGMDDEEGGAKLKRMIYICDSMTDKELDSDGKILIEQPTRMTRIARGSGTSVREVEDL 416
Query: 420 LEEYKRLAKIWSKMKG 435
L + + +A + KM G
Sbjct: 417 LTQQRMMAGMAKKMGG 432
>gi|380490983|emb|CCF35637.1| signal recognition particle protein [Colletotrichum higginsianum]
Length = 501
Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 230/458 (50%), Positives = 321/458 (70%), Gaps = 5/458 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ +DEK + L EI ALL+ADV +LV +++ +IK V
Sbjct: 1 MVLQDLGRRINTAVTNLTREANLDEKAFDGMLKEICAALLEADVNVRLVGQLRKSIKSTV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N +L NK+R+IQ+A+F+EL K++DP F PKKGK ++IMFVGLQG+GKTTTCTK
Sbjct: 61 NFKELPPAVNKKRLIQKAVFDELVKLVDPHAEPFKPKKGKSNIIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G+K LVCADTFRAGAFDQLKQNATKAKIP+YGS TE+DP +A EGVE FK
Sbjct: 121 LARHYQARGFKACLVCADTFRAGAFDQLKQNATKAKIPYYGSLTETDPAVVAREGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KE ++IIVDTSGRH+QE ALF+EM + A V PD I V+D+SIGQ A QA+AFK++
Sbjct: 181 KEKFEIIIVDTSGRHRQEEALFQEMVDIQTA-VRPDETIMVLDASIGQQAESQAKAFKEA 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
GA+I+TK DGHA GGGA+SAVAAT +P++FIGTGEHM +FE F + FVS+LLGMGD
Sbjct: 240 ADFGAIIITKTDGHASGGGAISAVAATHTPIVFIGTGEHMLDFERFAPQQFVSKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
+G ++ + + +DQ+ + ++ ++EG FT+R + +Q NI+KMGP+ ++ M+PG S
Sbjct: 300 MAGLVEHVQS-LKLDQK-DTIKHITEGIFTVRDLRDQLSNIMKMGPLSKMAGMIPGMSG- 356
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEM 419
+M ++E AK+KR + + DSMT +ELDS + +R+ R+A GSG VREV ++
Sbjct: 357 MMQGMDDEEGSAKLKRMIYICDSMTEKELDSDGKMFIEQPTRMTRVAHGSGTSVREVEDL 416
Query: 420 LEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMS 457
L + + +A + KM G + SA++ AQ ++
Sbjct: 417 LTQQRMMAGMAKKMGGNMKNMQRAQSAMAGGNKAQQLA 454
>gi|321259271|ref|XP_003194356.1| signal recognition particle 54 kDa protein [Cryptococcus gattii
WM276]
gi|317460827|gb|ADV22569.1| Signal recognition particle 54 kDa protein, putative [Cryptococcus
gattii WM276]
Length = 590
Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 235/482 (48%), Positives = 331/482 (68%), Gaps = 26/482 (5%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIK--- 57
MVLA LG + A Q+S A++ID+KV++ L E+ ALL++DV KLV ++T +K
Sbjct: 1 MVLADLGTRLHGAWNQLSKASVIDDKVIDSVLKELCAALLESDVNVKLVASLRTKVKAKV 60
Query: 58 -KIVNLDDLAAGH--NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGK 114
K + + A G NK+ ++Q+A+F+EL ++DPG + P KGK +V+M VG+QG+GK
Sbjct: 61 KKSLEESEKAGGREANKKNVVQKAVFDELVALVDPGTEPYKPVKGKTNVLMAVGIQGAGK 120
Query: 115 TTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVE 174
TTTCTK A ++Q++G++ LVCADTFRAGAFDQLKQNATKAKIPFYGSYTE+DPV IA
Sbjct: 121 TTTCTKLAVHYQRRGFRTCLVCADTFRAGAFDQLKQNATKAKIPFYGSYTETDPVAIASL 180
Query: 175 GVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQA 234
GVE F+KE D+IIVDTSGRHKQE+ LFEEM + A V PD+ + V+D+SIGQAA Q+
Sbjct: 181 GVEKFRKERFDVIIVDTSGRHKQESELFEEMVAIG-AAVKPDMTLMVLDASIGQAAEGQS 239
Query: 235 QAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSR 294
+AFK S GA+IVTK+DGHAKGGGA+SAVAATK+P+IF+GTGEH+++ E F +PF+S+
Sbjct: 240 RAFKDSADFGAIIVTKLDGHAKGGGAISAVAATKTPIIFLGTGEHLNDLERFAPQPFISK 299
Query: 295 LLGMGDWSGFMDKIHEVVPM--DQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFS 352
LLGMGD G ++ + ++ D+Q +L +KL +G FT+R EQ NI+ MG I ++ S
Sbjct: 300 LLGMGDMQGLVEHMQDMARANPDRQKDLAKKLEQGKFTIRDWREQLSNIMNMGSISKIAS 359
Query: 353 MLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSS-----------NPKLMNDSR 401
M+PG + +M G E+E+ AK+KR + + D+M +ELDS NP +N R
Sbjct: 360 MIPGLPAGIM-DGNEEEASAKLKRLIFITDAMRADELDSDGSIFVSYDKEGNPVGLN-KR 417
Query: 402 IMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLP 461
R+A+GSG +RE+ ++L + + +A + + G + G MSA+ + A + P
Sbjct: 418 AKRVAKGSGTSLRELEDLLVQARMMAGMAKQAGG----QNGWMSAMQKMQAAAGGKPLGP 473
Query: 462 QG 463
G
Sbjct: 474 NG 475
>gi|85098637|ref|XP_960643.1| signal recognition particle 54 kDa protein [Neurospora crassa
OR74A]
gi|28922154|gb|EAA31407.1| signal recognition particle 54 kDa protein [Neurospora crassa
OR74A]
gi|28949956|emb|CAD70717.1| probable signal recognition particle subunit SRP54 [Neurospora
crassa]
gi|336473358|gb|EGO61518.1| hypothetical protein NEUTE1DRAFT_120457 [Neurospora tetrasperma
FGSC 2508]
gi|350293361|gb|EGZ74446.1| signal recognition particle 54 kDa protein [Neurospora tetrasperma
FGSC 2509]
Length = 511
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 224/436 (51%), Positives = 316/436 (72%), Gaps = 5/436 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ A +DEK + L EI ALL+ADV +LV +++ +IK V
Sbjct: 1 MVLQDLGRRINAAVSDLTRAPNLDEKAFDGMLKEICSALLEADVNVRLVGQLRKSIKSTV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N +L NK+R+IQ+A+F+EL +++DP F PKKGK +VIMFVGLQG+GKTTTCTK
Sbjct: 61 NFKELPPAVNKKRLIQKAVFDELVRLVDPHAEPFKPKKGKSNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G++ LVCADTFRAGAFDQLKQNATKAKIP+YGS TE+DPV +A +GV+ FK
Sbjct: 121 LARHYQSRGFRVGLVCADTFRAGAFDQLKQNATKAKIPYYGSLTETDPVVVARDGVDKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KE ++IIVDTSGRH+QE ALF+EM + A V PD I V+D+SIGQ A QA+AFK++
Sbjct: 181 KEKFEIIIVDTSGRHRQEEALFQEMMDIQTA-VKPDETIMVLDASIGQQAEAQAKAFKEA 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
GA+I+TK DGHA GGGA+SAVAAT +P++FIGTGEHM + E F F+S+LLGMGD
Sbjct: 240 ADFGAIIITKTDGHAAGGGAISAVAATHTPIVFIGTGEHMLDLERFVPNNFISKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
+G ++ + + +DQ+ + ++ ++EG FT+R + +Q QNI+KMGP+ ++ M+PG S+
Sbjct: 300 MAGLVEHVQS-LKLDQK-DTIKHITEGIFTIRDLRDQLQNIMKMGPLSKMAGMIPGMSN- 356
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEM 419
+M ++E K+KR + + DSMT++ELDS ++ +R+ R+ARGSG VREV ++
Sbjct: 357 MMQNMDDEEGSLKLKRMIYICDSMTDKELDSDGKIFIDQPTRMTRVARGSGTTVREVEDL 416
Query: 420 LEEYKRLAKIWSKMKG 435
L + + +A + KM G
Sbjct: 417 LTQQRMMAGMAKKMGG 432
>gi|409082272|gb|EKM82630.1| hypothetical protein AGABI1DRAFT_111220 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 562
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 227/482 (47%), Positives = 326/482 (67%), Gaps = 24/482 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG ++ A+ ++ A ++DEKVL+ L EIT ALL+ DV KLV ++ +K V
Sbjct: 1 MVLADLGRKLNAALSSLNRAPVVDEKVLDVMLKEITAALLETDVNVKLVASLRNKVKHKV 60
Query: 61 ------NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGK 114
N D A N++ + Q+A+F+EL ++DPG + PKKG+ +V+M VGLQG+GK
Sbjct: 61 KALIEQNAGDKAKEMNRKHLTQKAVFDELVSLVDPGVEPYKPKKGQCNVVMLVGLQGNGK 120
Query: 115 TTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVE 174
TTTCTK A ++Q++G+K A+VCADTFRAGAFDQ +Q+AT+AK+ ++GSYTE+DPV IA +
Sbjct: 121 TTTCTKLAVHYQRRGFKSAIVCADTFRAGAFDQTRQSATRAKVAYFGSYTETDPVSIAAQ 180
Query: 175 GVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQA 234
GV FKKE ++IIVDTSGRHKQE+ LF+EM Q+ +A V P++ + V+D+SIGQAA Q+
Sbjct: 181 GVSKFKKERFEVIIVDTSGRHKQESELFQEMVQIGDA-VKPNMTVLVLDASIGQAAEAQS 239
Query: 235 QAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSR 294
+AFK S GA+IVTKMDGHAKGGGA+SAVAAT++P+IF+G GEH+ + + F +PF+S+
Sbjct: 240 RAFKDSADFGAIIVTKMDGHAKGGGAISAVAATQTPIIFLGVGEHLHDLDRFSPQPFISK 299
Query: 295 LLGMGDWSGFMDKIHEVVPM--DQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFS 352
LLG+GD G M+ + ++ D+Q E+ +KL EG ++R EQ QN++ MGPI ++ S
Sbjct: 300 LLGLGDMQGLMEHMQDLATQNPDKQKEMAKKLEEGKLSIRDWREQIQNVMNMGPISKIAS 359
Query: 353 MLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDS----------RI 402
M+PG E++ +G ++E ++KR + + DSMT ELDS M R+
Sbjct: 360 MIPGLPQEML-QGSDEEGSQRMKRMIYITDSMTAGELDSDGSPFMESGKDGKPTGLTWRV 418
Query: 403 MRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQ 462
R+ARGSG VREV E+L +Y+ +A + + G K G + A+ + A P
Sbjct: 419 TRVARGSGTSVREVEELLCQYRMMANMAKQAGG----KNGWLQAMQKVQQAAGSKGRGPN 474
Query: 463 GM 464
GM
Sbjct: 475 GM 476
>gi|171676350|ref|XP_001903128.1| hypothetical protein [Podospora anserina S mat+]
gi|170936241|emb|CAP60900.1| unnamed protein product [Podospora anserina S mat+]
Length = 516
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 224/436 (51%), Positives = 313/436 (71%), Gaps = 5/436 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ A +DEK + L +I ALL+ADV +LV ++ +IK V
Sbjct: 1 MVLQDLGRRINAAVTDLTRAPNLDEKAFDSMLKQICSALLEADVNVRLVGRLRKDIKAAV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N DL NK+R+IQ+A+F+ L ++DP F PKKGK +VIMFVGLQG+GKTTTCTK
Sbjct: 61 NFKDLPPAVNKKRLIQKAVFDHLVDLVDPHAEPFKPKKGKSNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G++ LVCADTFRAGAFDQLKQNATKAKIP+YGS TE+DP +A EGV+ FK
Sbjct: 121 LARHYQSRGFRACLVCADTFRAGAFDQLKQNATKAKIPYYGSLTETDPAVVAKEGVDKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KE ++IIVDTSGRH+QE+ALF+EM + A + PD I V+DSSIGQ A QA AFK++
Sbjct: 181 KERFEVIIVDTSGRHRQESALFQEMMDIQNA-IKPDETIMVLDSSIGQQAEGQAMAFKEA 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
GA+I+TK DGHA GGGA+SAVAAT++P++FIGTGEHM + E F K F+S+LLGMGD
Sbjct: 240 ADFGAIIITKTDGHAAGGGAISAVAATRTPIVFIGTGEHMLDLERFVPKNFISKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
+G ++ + + +DQ+ + ++ ++EG FT+R + +Q QNI+KMGP+ ++ M+PG S+
Sbjct: 300 MAGLVEHVQS-LKLDQK-DTIKHITEGIFTVRDLRDQLQNIMKMGPLSKMAGMIPGMSN- 356
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEM 419
+M ++E K+KR + + DSMT++ELDS + +R+ R+ARGSG VREV ++
Sbjct: 357 IMANMDDEEGSLKLKRMIYICDSMTDKELDSDGKIFIEQPTRMTRVARGSGTTVREVEDL 416
Query: 420 LEEYKRLAKIWSKMKG 435
L + + +A + KM G
Sbjct: 417 LTQQRLMAGMAKKMGG 432
>gi|310800676|gb|EFQ35569.1| signal recognition particle protein SRP54 [Glomerella graminicola
M1.001]
Length = 526
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 237/489 (48%), Positives = 336/489 (68%), Gaps = 7/489 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ +DEK + L EI ALL+ADV +LV +++ +IK V
Sbjct: 1 MVLQDLGRRINTAVSNLTREPNLDEKAFDGMLKEICAALLEADVNVRLVGQLRKSIKSTV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N +L NK+R+IQ+A+F+EL K++DP F PKKGK +++MFVGLQG+GKTTTCTK
Sbjct: 61 NFKELPPAVNKKRLIQKAVFDELVKLVDPHAEPFKPKKGKSNIVMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G+K LVCADTFRAGAFDQLKQNATKAKIP+YGS TE+DP +A EGV+ FK
Sbjct: 121 LARHYQARGFKACLVCADTFRAGAFDQLKQNATKAKIPYYGSLTETDPAVVAKEGVDKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KE ++IIVDTSGRH+QE ALF+EM + A + PD I V+D+SIGQ A QA+AFK++
Sbjct: 181 KEKFEIIIVDTSGRHRQEEALFQEMVDIQTA-IRPDETIMVLDASIGQQAESQAKAFKEA 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
GA+I+TK DGHA GGGA+SAVAAT +P++FIGTGEHM +FE F + FVS+LLGMGD
Sbjct: 240 ADFGAIIITKTDGHASGGGAISAVAATHTPIVFIGTGEHMLDFERFAPQQFVSKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
+G ++ + + +DQ+ + ++ ++EG FT+R + +Q NI+KMGP+ ++ M+PG S
Sbjct: 300 MAGLVEHVQS-LKLDQK-DTIKHITEGIFTVRDLRDQLSNIMKMGPLSKMAGMIPGMSG- 356
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEM 419
+M ++E AK+KR + + DSMT++ELDS + +R+ R+A GSG VREV ++
Sbjct: 357 MMQGMDDEEGSAKLKRMIYICDSMTDKELDSDGKMFIEQPTRMTRVAHGSGTSVREVEDL 416
Query: 420 LEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQIGGVGGLQNLMK 479
L + + +A + KM G + SA++ AQ ++ + Q L+ +GG G M
Sbjct: 417 LTQQRMMAGMAKKMGGNMKNMQRAQSAMAGGNKAQQLAAM--QKRLQSMGGAGAGGGGMP 474
Query: 480 QMGSTKDMM 488
MGS M+
Sbjct: 475 DMGSLMKML 483
>gi|336264067|ref|XP_003346812.1| hypothetical protein SMAC_05070 [Sordaria macrospora k-hell]
gi|380090282|emb|CCC11858.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 512
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 232/472 (49%), Positives = 333/472 (70%), Gaps = 9/472 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ A +DEK + L EI ALL+ADV +LV +++ +IK V
Sbjct: 1 MVLQDLGRRINAAVSDLTRAPNLDEKAFDGMLKEICSALLEADVNVRLVGQLRKSIKSTV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N +L NK+R+IQ+A+F+EL +++DP F PKKGK +VIMFVGLQG+GKTTTCTK
Sbjct: 61 NFKELPPAVNKKRLIQKAVFDELVRLVDPHAEPFKPKKGKSNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G++ LVCADTFRAGAFDQLKQNATKAKIP+YGS TE+DPV +A +GV+ FK
Sbjct: 121 LARHYQSRGFRVGLVCADTFRAGAFDQLKQNATKAKIPYYGSLTETDPVVVARDGVDKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KE ++IIVDTSGRH+QE +LF+EM + A V PD I V+D+SIGQ A QA+AFK++
Sbjct: 181 KEKFEIIIVDTSGRHRQEESLFQEMMDIQTA-VKPDETIMVLDASIGQQAEAQAKAFKEA 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
GA+I+TK DGHA GGGA+SAVAAT +P++FIGTGEHM + E F F+S+LLGMGD
Sbjct: 240 ADFGAIIITKTDGHAAGGGAISAVAATHTPIVFIGTGEHMLDLERFVPNNFISKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
+G ++ + + +DQ+ + ++ ++EG FT+R + +Q QNI+KMGP+ ++ M+PG SS
Sbjct: 300 MAGLVEHVQS-LKLDQK-DTIKHITEGIFTIRDLRDQLQNIMKMGPLSKMAGMIPGMSS- 356
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND--SRIMRIARGSGRQVREVME 418
+M ++E K+KR + + DSMT++ELD S+ K+ + +R+ R+A+GSG VREV +
Sbjct: 357 MMQNMDDEEGSLKLKRMIYICDSMTDKELD-SDGKIFTEQPTRMTRVAKGSGTTVREVED 415
Query: 419 MLEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQIGG 470
+L + + +A + KM G + SA+ AQ ++ + Q L+ +GG
Sbjct: 416 LLTQQRMMAGMAKKMGGNMKNMQRAQSAMGGGNKAQQLAAM--QKRLQSMGG 465
>gi|67469473|ref|XP_650715.1| signal recognition particle protein SRP54 [Entamoeba histolytica
HM-1:IMSS]
gi|56467365|gb|EAL45328.1| signal recognition particle protein SRP54, putative [Entamoeba
histolytica HM-1:IMSS]
gi|407040992|gb|EKE40461.1| signal recognition particle protein SRP54 protein [Entamoeba
nuttalli P19]
gi|449704334|gb|EMD44599.1| signal recognition particle 54 kDa subunit SRP54, putative
[Entamoeba histolytica KU27]
Length = 487
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 236/492 (47%), Positives = 331/492 (67%), Gaps = 26/492 (5%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL+QLG S+ A+++M+++T++DE+V+N L EI +LL DV +R+M NIKK +
Sbjct: 1 MVLSQLGSSLVTALRKMTSSTVVDEEVINTLLKEIETSLLGEDVNPIFIRQMVNNIKKKI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N +D+ G +KR++I+ ++F EL ++DP +F PKKGK V+M VGLQG+GKTTT TK
Sbjct: 61 NSEDIPDGIDKRKLIKDSVFEELINLVDPKTEAFKPKKGKTCVLMMVGLQGAGKTTTITK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A Y++ +G+KPA+V ADTFRAGA++QL+ NA +A +PF+G ESDPV++A EGV TF+
Sbjct: 121 LALYYKNRGYKPAVVGADTFRAGAYEQLQMNAKRAGVPFFGIKEESDPVKVASEGVRTFR 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KE D+I+VDTSGRHKQ+ LF+EM+ V +A + PD +IFVMD +IGQAAF QA+AFK +
Sbjct: 181 KEKNDIILVDTSGRHKQDKELFKEMQSVRDA-IKPDSIIFVMDGAIGQAAFGQAKAFKDA 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V VG+VI+TK+DGH+ GGGALSAVAATKSP+IFIGTGE ++E E FD + FV +LLGMGD
Sbjct: 240 VEVGSVIITKLDGHSNGGGALSAVAATKSPIIFIGTGEKVNEIEEFDAESFVRKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G + + +++ L EG T+R EQ N+ KMG +G + M+ G +
Sbjct: 300 LKGIAKLAKDFAENAEYKTMVKHLQEGTLTVRDWKEQLSNLQKMGQLGNIMQMI-GLNHP 358
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEM 419
+ G + K K +M ++DSMT+ ELD S ++ND SRI R+ARGSGR +REV E+
Sbjct: 359 MFQGG---NIEKKFKVFMVILDSMTDRELDGSAKTMLNDESRIRRLARGSGRDIREVNEL 415
Query: 420 LEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNA--------QHMSKVLPQGMLKQIGGV 471
E+ K + ++ PK M A N NA Q M ++LP+G+ +
Sbjct: 416 FEQIKLFQQCIDRL-----PKA--MRAQLGNCNAQPNEAAMMQQMQRMLPKGVNQ----- 463
Query: 472 GGLQNLMKQMGS 483
LQ LMKQM +
Sbjct: 464 AQLQQLMKQMNA 475
>gi|406700686|gb|EKD03851.1| signal recognition particle 54 kDa protein [Trichosporon asahii
var. asahii CBS 8904]
Length = 557
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 238/503 (47%), Positives = 335/503 (66%), Gaps = 41/503 (8%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG + A+ Q S + +DE ++ + E+ ALL++DV KLV +++ +K V
Sbjct: 1 MVLADLGARLHGALNQFSKTSSVDETAIDALVKELCAALLESDVNVKLVSQLRAKVKAKV 60
Query: 61 --NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTC 118
NL+D + +A+F+EL ++DPG + P KGK +VIM VG+QG+GKTTTC
Sbjct: 61 KRNLEDAEKAGGR-----EAVFDELVALVDPGTEPYKPVKGKVNVIMAVGIQGAGKTTTC 115
Query: 119 TKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVET 178
TK A ++Q++G++ LVCADTFRAGAFDQLKQNATKAKIPF+GSYTE+DPV IA +GVE
Sbjct: 116 TKLAVHYQRRGFRTCLVCADTFRAGAFDQLKQNATKAKIPFFGSYTETDPVTIAYQGVEK 175
Query: 179 FKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFK 238
F+KE D+IIVDTSGRHKQE+ LFEEM +S+A V PD+ + V+D+SIGQAA Q++AFK
Sbjct: 176 FRKERFDVIIVDTSGRHKQESELFEEMVSISKA-VKPDMTVMVLDASIGQAAEGQSRAFK 234
Query: 239 QSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGM 298
S G++IVTK+DGHAKGGGA+SAVAATK+P+IF+GTGEH+++ E F +PF+S+LLGM
Sbjct: 235 DSSDFGSIIVTKLDGHAKGGGAISAVAATKTPIIFLGTGEHLNDLEKFAPQPFISKLLGM 294
Query: 299 GDWSGFMDKIHEVVPM--DQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPG 356
GD G M+ + ++ D Q +L +KL EG FT+R +Q NI+ MG + ++ SM+PG
Sbjct: 295 GDIQGLMEHMQDMARANPDGQKDLAKKLGEGKFTIRDWKDQLSNIMNMGSLSKIASMVPG 354
Query: 357 FSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREV 416
S +M +G E+E+ AK+KR + + D+M +ELDS D I R+A+GSG VREV
Sbjct: 355 MSG-MMEQGGEEEAAAKLKRMIFITDAMRTDELDS-------DGLIFRVAQGSGTSVREV 406
Query: 417 MEMLEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNA-----------------QHMSKV 459
E+L + + +A + + G + G MSA+ + A Q M
Sbjct: 407 EELLAQARMMAGMARQAGG----QNGWMSAMQKMQAAAGGKPLGPNGMPSQQQIQAMRNA 462
Query: 460 LPQGMLKQI--GGVGGLQNLMKQ 480
+P +LK++ G GG Q +M +
Sbjct: 463 MPPELLKKLRAAGPGGAQKMMAE 485
>gi|340519181|gb|EGR49420.1| signal recognition particle subunit srp54 [Trichoderma reesei QM6a]
Length = 520
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 232/458 (50%), Positives = 319/458 (69%), Gaps = 12/458 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ +DEK EI ALL+ADV +LV +++ +I+ V
Sbjct: 1 MVLQDLGRRINAAVSNLTREQNLDEK-------EICAALLEADVNVRLVGQLRKSIRSTV 53
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N +L NK+R+IQ+A+F+EL K++DP F PKKGK +VIMFVGLQG+GKTTTCTK
Sbjct: 54 NFKELPPAVNKKRLIQKAVFDELVKLVDPHAEPFKPKKGKSNVIMFVGLQGAGKTTTCTK 113
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G + LVCADTFRAGAFDQLKQNATKAKIP+YGS TE+DP +A GVE FK
Sbjct: 114 LARHYQTRGLRACLVCADTFRAGAFDQLKQNATKAKIPYYGSLTETDPAAVARAGVEQFK 173
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KE D+IIVDTSGRH+QE+ALF+EM + +A VNPD I V+D+SIGQ A QA+AFK++
Sbjct: 174 KEKFDVIIVDTSGRHRQESALFQEMIDI-QAAVNPDETIMVLDASIGQQAEAQAKAFKEA 232
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
GA+I+TK DGHA GGGA+SAVAAT +P++FIGTGEHM + E F+ + FV +LLGMGD
Sbjct: 233 ADFGAIIITKTDGHAHGGGAISAVAATHTPIVFIGTGEHMLDLERFEPQRFVQKLLGMGD 292
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
+G ++ + + Q + ++ L EG FT+R + +Q NI+KMGP+ ++ M+PG S
Sbjct: 293 MAGLVEHVQSLNL--NQKDTMKHLQEGIFTVRDLRDQLSNIMKMGPLSKMAGMIPGMSG- 349
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEM 419
LM ++E AK+KR + + DSMT++ELDS L+++ +R+ RIARGSG VREV ++
Sbjct: 350 LMQGMDDEEGGAKLKRMIYICDSMTDKELDSDGKLLIDEPTRMTRIARGSGTSVREVEDL 409
Query: 420 LEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMS 457
L + + +A + KM G + A+S AQ M+
Sbjct: 410 LTQQRMMAGMAKKMGGNMKNMQRAQQAMSGANKAQQMA 447
>gi|167385123|ref|XP_001737215.1| signal recognition particle 54 kDa protein [Entamoeba dispar
SAW760]
gi|165900054|gb|EDR26502.1| signal recognition particle 54 kDa protein [Entamoeba dispar
SAW760]
Length = 487
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 236/492 (47%), Positives = 330/492 (67%), Gaps = 26/492 (5%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL+QLG S+ A+++M+++T++DE+V+N L EI +LL DV +R+M NIKK +
Sbjct: 1 MVLSQLGSSLVTALRKMTSSTVVDEEVINTLLKEIETSLLGEDVNPIFIRQMVNNIKKKI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N +D+ G +KR++I+ ++F EL ++DP F PKKGK V+M VGLQG+GKTTT TK
Sbjct: 61 NSEDIPDGIDKRKLIKDSVFEELINLVDPKTEPFKPKKGKTCVLMMVGLQGAGKTTTITK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A Y++ +G+KPA+V ADTFRAGA++QL+ NA +A +PF+G ESDPV++A EGV TF+
Sbjct: 121 LALYYKNRGYKPAVVGADTFRAGAYEQLQMNAKRAGVPFFGIKEESDPVKVASEGVRTFR 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KE D+I+VDTSGRHKQ+ LF+EM+ V +A + PD +IFVMD +IGQAAF QA+AFK +
Sbjct: 181 KEKNDIILVDTSGRHKQDKELFKEMQSVRDA-IKPDSIIFVMDGAIGQAAFGQAKAFKDA 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V VG+VI+TK+DGH+ GGGALSAVAATKSP+IFIGTGE ++E E FD + FV +LLGMGD
Sbjct: 240 VEVGSVIITKLDGHSNGGGALSAVAATKSPIIFIGTGEKVNEIEEFDAESFVRKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G + + +++ L EG T+R EQ N+ KMG +G + M+ G +
Sbjct: 300 LKGIAKLAKDFAENAEYKTMVKHLQEGTLTVRDWKEQLTNLQKMGQLGNIMQMI-GLNHP 358
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEM 419
+ G + K K +M ++DSMT+ ELD S ++ND SRI R+ARGSGR +REV E+
Sbjct: 359 MFQGG---NIEKKFKVFMVILDSMTDRELDGSAKTMLNDESRIRRLARGSGRDIREVNEL 415
Query: 420 LEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNA--------QHMSKVLPQGMLKQIGGV 471
E+ K + ++ PK M A N NA Q M ++LP+G+ +
Sbjct: 416 FEQIKLFQQCIDRL-----PKA--MRAQLGNSNAQPNEAAMIQQMQRMLPKGVNQ----- 463
Query: 472 GGLQNLMKQMGS 483
LQ LMKQM +
Sbjct: 464 AQLQQLMKQMNA 475
>gi|3334340|sp|O15821.1|SRP54_ENTHI RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|17980209|gb|AAL50553.1| signal recognition particle 54 kDa subunit SRP54 [Entamoeba
histolytica]
Length = 487
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 236/492 (47%), Positives = 331/492 (67%), Gaps = 26/492 (5%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL+QLG S+ A+++M+++T++DE+V+N L EI +LL DV +R+M NIKK +
Sbjct: 1 MVLSQLGSSLVTALRKMTSSTVVDEEVINTLLKEIETSLLGEDVNPIFIRQMVNNIKKKI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N +D+ G +KR++I+ ++F EL ++DP +F PKKGK V+M VGLQG+GKTTT TK
Sbjct: 61 NSEDIPDGIDKRKLIKDSVFEELINLVDPKTEAFKPKKGKTCVLMMVGLQGAGKTTTITK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A Y++ +G+KPA+V ADTFRAGA++QL+ NA +A +PF+G ESDPV++A EGV TF+
Sbjct: 121 LALYYKNRGYKPAVVGADTFRAGAYEQLQMNAKRAGVPFFGIKEESDPVKVASEGVRTFR 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KE D+I+VDTSGRHKQ+ LF+EM+ V +A + PD +IFVMD +IGQAAF QA+AFK +
Sbjct: 181 KEKNDIILVDTSGRHKQDKELFKEMQSVRDA-IKPDSIIFVMDGAIGQAAFGQAKAFKDA 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V VG+VI+TK+DGH+ GGGALSAVAATKSP+IFIGTGE ++E E FD + FV +LLGMGD
Sbjct: 240 VEVGSVIITKLDGHSNGGGALSAVAATKSPIIFIGTGEKVNEIEEFDAESFVRQLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G + + +++ L EG T+R EQ N+ KMG +G + M+ G +
Sbjct: 300 LKGIAKLAKDFAENAEYKTMVKHLQEGTLTVRDWKEQLSNLQKMGQLGNIMQMI-GLNHP 358
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEM 419
+ G + K K +M ++DSMT+ ELD S ++ND SRI R+ARGSGR +REV E+
Sbjct: 359 MFQGG---NIEKKFKVFMVILDSMTDRELDGSAKTMLNDESRIRRLARGSGRDIREVNEL 415
Query: 420 LEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNA--------QHMSKVLPQGMLKQIGGV 471
E+ K + ++ PK M A N NA Q M ++LP+G+ +
Sbjct: 416 FEQIKLFQQCIDRL-----PKA--MRAQLGNCNAQPNEAAMMQQMQRMLPKGVNQ----- 463
Query: 472 GGLQNLMKQMGS 483
LQ LMKQM +
Sbjct: 464 AQLQQLMKQMNA 475
>gi|361124020|gb|EHK96146.1| putative Signal recognition particle 54 kDa protein like protein
[Glarea lozoyensis 74030]
Length = 540
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 224/436 (51%), Positives = 311/436 (71%), Gaps = 5/436 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ ++ +DEK + + EI ALL+ADV KLV ++ +IK V
Sbjct: 12 MVLQDLGRRINAAVSDLTRSSNLDEKAFDGMIKEICSALLEADVNVKLVGNLRKSIKSSV 71
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N +LA NK+R+IQ+ +++EL K++DP F PKKGKP+VIMFVGLQG+GKTTTCTK
Sbjct: 72 NFKELAPSVNKKRLIQKTVYDELVKLVDPHAEPFKPKKGKPNVIMFVGLQGAGKTTTCTK 131
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G+K +VCADTFRAGAFDQLKQNATKAKIP+YGS T++DP +A EGVE FK
Sbjct: 132 LARHYQSRGFKACMVCADTFRAGAFDQLKQNATKAKIPYYGSLTQTDPAVVAREGVEKFK 191
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KE D+IIVDTSGRH+QE ALF+EM + A V PD I V+D+SIGQ A Q++AFK++
Sbjct: 192 KEKFDIIIVDTSGRHRQEDALFQEMVDIQNA-VKPDQTIMVLDASIGQQAEAQSKAFKET 250
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
GA+I+TK DGHA GGGA+SAVAAT +P++FIGTGEHM + E F + F+S+LLGMGD
Sbjct: 251 ADFGAIIITKTDGHASGGGAISAVAATHTPIVFIGTGEHMLDLEKFAPQQFISKLLGMGD 310
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G ++ + + +DQ+ + ++ + EG FT+R + +Q NI+KMGP+ ++ M+PG S
Sbjct: 311 MQGLVEHVQS-LKLDQK-DTMKHIVEGVFTVRDLRDQLSNIMKMGPLSKMAGMIPGMSG- 367
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEM 419
+M ++E K+KR + + DSMT +ELDS + +R+ RIA GSG VREV ++
Sbjct: 368 MMQGMDDEEGSLKLKRMIYICDSMTAKELDSDGKMFIEQPTRMTRIACGSGTSVREVEDL 427
Query: 420 LEEYKRLAKIWSKMKG 435
L ++K +A + KM G
Sbjct: 428 LTQHKMMAGMAKKMGG 443
>gi|46130818|ref|XP_389140.1| hypothetical protein FG08964.1 [Gibberella zeae PH-1]
Length = 521
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 227/436 (52%), Positives = 311/436 (71%), Gaps = 12/436 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ +DEK EI ALL+ADV KLV +++ +IK V
Sbjct: 1 MVLQDLGRRINAAVTNLTREQNLDEK-------EICAALLEADVNVKLVGQLRKSIKTTV 53
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N +L NK+R+IQ+A+F+EL K++DP F PKKGK +VIMFVGLQG+GKTTTCTK
Sbjct: 54 NFKELPPAVNKKRLIQKAVFDELVKLVDPHAEPFRPKKGKSNVIMFVGLQGAGKTTTCTK 113
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G+K LVCADTFRAGAFDQLKQNATKAKIP+YGS TE+DP +A GV+ FK
Sbjct: 114 LARHYQSRGFKACLVCADTFRAGAFDQLKQNATKAKIPYYGSLTETDPAEVARAGVDQFK 173
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KE ++IIVDTSGRH+QE+ALF+EM + EA + PD I V+D+SIGQ A QA+AFK++
Sbjct: 174 KERFEVIIVDTSGRHRQESALFQEMVDIQEA-IKPDETIMVLDASIGQQAESQAKAFKEA 232
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
GA+I+TK DGHA GGGA+SAVAAT +P++FIGTGEHM +FE F + FV +LLGMGD
Sbjct: 233 ADFGAIIITKTDGHAHGGGAISAVAATHTPIVFIGTGEHMLDFEKFAPQQFVQKLLGMGD 292
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
+G M+ + + Q + ++ + EG FT+R + +Q NI+KMGP+ ++ M+PG S+
Sbjct: 293 MAGLMEHVQSLNL--NQKDTIKHIQEGIFTVRDLRDQLSNIMKMGPLSKMAGMIPGMSN- 349
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEM 419
+M ++E AK+KR + + DSMT++ELDS L++ +R+ RIARGSG VREV ++
Sbjct: 350 MMQGMDDEEGGAKLKRMIYICDSMTDKELDSDGKILIDQPTRMTRIARGSGTSVREVEDL 409
Query: 420 LEEYKRLAKIWSKMKG 435
L + + +A + KM G
Sbjct: 410 LTQQRMMAGMAKKMGG 425
>gi|440633691|gb|ELR03610.1| signal recognition particle protein SRP54 [Geomyces destructans
20631-21]
Length = 527
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 223/436 (51%), Positives = 313/436 (71%), Gaps = 5/436 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ ++ +DEK + + EI ALL+ADV KLV ++ +IK V
Sbjct: 1 MVLQDLGRRINAAVNDLTRSSNLDEKAFDGMIKEICTALLEADVNVKLVGNLRKSIKASV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N DL NK+R+IQ+++F+EL K++DP F PKKGKP+VIMFVGLQG+GKTTTCTK
Sbjct: 61 NFKDLEPSVNKKRLIQKSVFDELVKLVDPHAEPFKPKKGKPNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G+K LVCADTFRAGAFDQLKQNATKAKIP+YGS T++DP +A EGV+ FK
Sbjct: 121 LARHYQSRGFKACLVCADTFRAGAFDQLKQNATKAKIPYYGSLTQTDPAVVAKEGVDKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KE ++IIVDTSGRH+QE ALF+EM+ + +A V PD I V+DSSIGQ A Q++AFK++
Sbjct: 181 KERFEIIIVDTSGRHRQEDALFQEMKDIQDA-VKPDQTIMVLDSSIGQQAEAQSKAFKEA 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
GA+I+TK DG A GGGA+SAVAAT++P++FIGTGEHM + E F + FV++LLGMGD
Sbjct: 240 ADFGAIIITKTDGSASGGGAISAVAATRTPIVFIGTGEHMLDLERFAPQQFVNKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G ++ + + +DQ+ + ++ ++EG FT+R + +Q NI+KMGP+ ++ M+PG S
Sbjct: 300 MQGLVEHVQS-LKLDQK-DTIKHIAEGVFTIRDLRDQLSNIMKMGPLSKMAGMIPGMSG- 356
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEM 419
+M ++E K+KR + + DSMT +ELD + +R+ RIA GSG VREV ++
Sbjct: 357 MMQGMDDEEGSLKLKRMIYICDSMTTKELDCDGKLFIEQPTRMTRIAHGSGTSVREVEDI 416
Query: 420 LEEYKRLAKIWSKMKG 435
L ++K +A + KM G
Sbjct: 417 LTQHKMMAGMAKKMGG 432
>gi|405120876|gb|AFR95646.1| signal recognition particle protein [Cryptococcus neoformans var.
grubii H99]
Length = 587
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 232/482 (48%), Positives = 330/482 (68%), Gaps = 26/482 (5%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIK--- 57
MVLA LG + A Q+S A++ID+KV++ L E+ ALL++DV KLV ++T +K
Sbjct: 1 MVLADLGTRLHGAWNQLSKASVIDDKVIDGVLKELCAALLESDVNVKLVASLRTKVKAKV 60
Query: 58 -KIVNLDDLAAGH--NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGK 114
K + + G NK+ ++Q+A+F+EL ++DPG + P KGK +V+M VG+QG+GK
Sbjct: 61 KKSLEESEKTGGREANKKNVVQKAVFDELVALVDPGTEPYKPVKGKTNVLMAVGIQGAGK 120
Query: 115 TTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVE 174
TTTCTK A ++Q++G++ LVCADTFRAGAFDQLKQNATKAKIPFYGSYTE+DPV IA
Sbjct: 121 TTTCTKLAVHYQRRGFRTCLVCADTFRAGAFDQLKQNATKAKIPFYGSYTETDPVAIASL 180
Query: 175 GVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQA 234
GVE F+KE D+I+VDTSGRHKQE+ LFEEM + A V PD+ + V+D+SIGQAA Q+
Sbjct: 181 GVEKFRKERFDVIVVDTSGRHKQESELFEEMVAIG-AAVKPDMTLMVLDASIGQAAEGQS 239
Query: 235 QAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSR 294
+AFK S GA+IVTK+DGHAKGGGA+SAVAATK+P+IF+GTGEH+++ E F +PF+S+
Sbjct: 240 RAFKDSADFGAIIVTKLDGHAKGGGAISAVAATKTPIIFLGTGEHLNDLERFAPQPFISK 299
Query: 295 LLGMGDWSGFMDKIHEVVPM--DQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFS 352
LLGMGD G ++ + ++ D+Q +L +KL +G F++R EQ NI+ MG I ++ S
Sbjct: 300 LLGMGDMQGLVEHMQDMARANPDRQKDLAKKLEQGKFSIRDWREQLSNIMNMGSISKIAS 359
Query: 353 MLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSS-----------NPKLMNDSR 401
M+PG + +M G E+E+ AK+KR + + D+M +ELDS NP +N R
Sbjct: 360 MIPGLPAGIM-DGNEEEASAKLKRLIFITDAMRADELDSDGSIFVSYDKQGNPVGLN-KR 417
Query: 402 IMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLP 461
R+A+GSG +RE+ ++L + + +A + + G + G MSA+ + A + P
Sbjct: 418 AKRVAKGSGTSLRELEDLLVQARMMAGMAKQAGG----QNGWMSAMQKMQAAAGGKPLGP 473
Query: 462 QG 463
G
Sbjct: 474 NG 475
>gi|406860320|gb|EKD13379.1| signal recognition particle protein SRP54 [Marssonina brunnea f.
sp. 'multigermtubi' MB_m1]
Length = 525
Score = 446 bits (1148), Expect = e-122, Method: Compositional matrix adjust.
Identities = 225/436 (51%), Positives = 310/436 (71%), Gaps = 5/436 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ ++ +DEK + + EI ALL+ADV +LV ++ +IK V
Sbjct: 1 MVLQDLGRRINAAVSDLTRSSNLDEKAFDGMIKEICAALLEADVNVRLVGNLRKSIKASV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N D A G NK+R+IQ+A+F+EL K++DP F PKKGK +VIMFVGLQG+GKTTTCTK
Sbjct: 61 NFKDQAPGVNKKRLIQKAVFDELVKLVDPHAEPFKPKKGKANVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G+K LVCADTFRAGAFDQLKQNATKAKIP+YGS T++DP +A EGVE FK
Sbjct: 121 LARHYQSRGFKACLVCADTFRAGAFDQLKQNATKAKIPYYGSLTQTDPAVVAKEGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KE ++IIVDTSGRH+QE ALF+EM + A V PD I V+D+SIGQ A Q++AFK++
Sbjct: 181 KERFEIIIVDTSGRHRQEDALFQEMVDIQTA-VKPDQTIMVLDASIGQQAEAQSKAFKET 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
GA+I+TK DGHA GGGA+SAVAAT +P++FIGTGEHM + E F + FVS+LLGMGD
Sbjct: 240 ADFGAIIITKTDGHASGGGAISAVAATHTPIVFIGTGEHMLDLERFAPQQFVSKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G ++ + + +DQ+ + ++ ++EG FT+R + +Q NI+KMGP+ ++ M+PG S
Sbjct: 300 MQGLVEHVQS-LKLDQK-DTMKHIAEGVFTVRDLRDQLSNIMKMGPLSKMAGMIPGMSG- 356
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEM 419
+M + E K+KR + + DSMT +ELDS + +R+ RIA GSG V EV ++
Sbjct: 357 MMQGMDDDEGSMKLKRMIYICDSMTAKELDSDGKMFIEQPTRMTRIAYGSGTSVHEVEDL 416
Query: 420 LEEYKRLAKIWSKMKG 435
L ++K +A + KM G
Sbjct: 417 LTQHKMMAGMAKKMGG 432
>gi|258571053|ref|XP_002544330.1| signal recognition particle 54 kDa protein [Uncinocarpus reesii
1704]
gi|237904600|gb|EEP79001.1| signal recognition particle 54 kDa protein [Uncinocarpus reesii
1704]
Length = 539
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 226/439 (51%), Positives = 304/439 (69%), Gaps = 4/439 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ ++ +DEK + L EI ALL ADV +LV+E++ +IK V
Sbjct: 1 MVLQDLGRRINAAVSDLTRSSNLDEKAFDSMLKEICAALLSADVNVRLVQELRKSIKSSV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N + NK+R+IQ+A+F++L ++DP F PKKG+ +VIMFVGLQG+GKTTTCTK
Sbjct: 61 NFSSIPPAVNKKRLIQKAVFDQLVTLVDPKTEPFKPKKGRSNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G+K ALVCADTFRAGAFDQLKQNATKAKIP+YGS T++DP +A EGV FK
Sbjct: 121 LARHYQTRGFKSALVCADTFRAGAFDQLKQNATKAKIPYYGSLTQTDPAIVAAEGVAKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KE +LIIVDTSGRHKQEA LF EM Q+ A V PD I V+DS+IGQAA Q+ AFK +
Sbjct: 181 KEKFELIIVDTSGRHKQEADLFTEMIQIQNA-VKPDQTIMVLDSTIGQAAEAQSAAFKST 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
GA+I+TK DGHA GGGA+SAVAATK+P+IF+GTGEHM + E F KPF+ +LLGMGD
Sbjct: 240 ADFGAIIITKTDGHAAGGGAISAVAATKTPIIFLGTGEHMLDLERFAPKPFIQKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQ-QPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSS 359
+ ++ + V E + +SEG FTLR E +I+KMGP+ ++ SM+PG S
Sbjct: 300 MASLVEHVQAVTQGSAGAKETYKHISEGIFTLRDFRENITSIMKMGPLSKISSMIPGLSG 359
Query: 360 ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVME 418
L +++ K++R + + DSMT ELD ++ SRI+R+A GSG VREV +
Sbjct: 360 -LTAGLDDEDGSLKLRRMIYIFDSMTAAELDGDGKVFVDQPSRIVRVAYGSGTSVREVED 418
Query: 419 MLEEYKRLAKIWSKMKGLK 437
+L ++K +A + K+ G K
Sbjct: 419 LLSQHKMMAGMAKKVGGQK 437
>gi|358382412|gb|EHK20084.1| hypothetical protein TRIVIDRAFT_48175 [Trichoderma virens Gv29-8]
Length = 517
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 231/458 (50%), Positives = 319/458 (69%), Gaps = 12/458 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ +DEK EI ALL+ADV +LV +++ +I+ V
Sbjct: 1 MVLQDLGRRINAAVSNLTREQNLDEK-------EICAALLEADVNVRLVGQLRKSIRSTV 53
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N +L NK+R+IQ+A+F+EL K++DP F PKKGK +VIMFVGLQG+GKTTTCTK
Sbjct: 54 NFKELPPAVNKKRLIQKAVFDELVKLVDPHAEPFKPKKGKSNVIMFVGLQGAGKTTTCTK 113
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G + LVCADTFRAGAFDQLKQNATKAKIP+YGS TE+DP +A GVE FK
Sbjct: 114 LARHYQSRGLRACLVCADTFRAGAFDQLKQNATKAKIPYYGSLTETDPAAVARAGVEQFK 173
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KE D+IIVDTSGRH+QE+ALF+EM + +A V+PD I V+D+SIGQ A QA+AFK++
Sbjct: 174 KEKFDVIIVDTSGRHRQESALFQEMIDI-QAAVSPDETIMVLDASIGQQAEAQAKAFKEA 232
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
GA+I+TK DGHA GGGA+SAVAAT +P++FIGTGEHM + E F+ + FV +LLGMGD
Sbjct: 233 ADFGAIIITKTDGHAHGGGAISAVAATHTPIVFIGTGEHMLDLERFEPQRFVQKLLGMGD 292
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
+G ++ + + Q + ++ L EG FT+R + +Q NI+KMGP+ ++ M+PG S
Sbjct: 293 MAGLVEHVQSLNL--NQKDTMKHLQEGIFTVRDLRDQLSNIMKMGPLSKMAGMIPGMSG- 349
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEM 419
LM ++E AK+KR + + DSMT++ELDS L+++ +R+ RIARGSG VREV ++
Sbjct: 350 LMQGMDDEEGGAKLKRMIYICDSMTDKELDSDGKILIDEPTRMTRIARGSGTSVREVEDL 409
Query: 420 LEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMS 457
L + + +A + KM G + A+S AQ M+
Sbjct: 410 LTQQRMMAGMAKKMGGNMKNMQRAQQAMSGANKAQQMA 447
>gi|346975514|gb|EGY18966.1| srp54-like protein [Verticillium dahliae VdLs.17]
Length = 525
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 223/436 (51%), Positives = 309/436 (70%), Gaps = 5/436 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ A +DEK + L EI ALL+ADV +LV +++ +IK V
Sbjct: 1 MVLQDLGRRINTAVSDLTRAPNLDEKAFDGMLKEICAALLEADVNVRLVGQLRKSIKSTV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N DL NK+R+IQ+ +F+EL K++DP F PKKGK +VIMFVGLQG+GKTTTCTK
Sbjct: 61 NFKDLPPAVNKKRLIQKTVFDELVKLVDPHAEPFKPKKGKANVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G K LVCADTFRAGAFDQLKQNATKAKIP+YGS TE+DP +A EGV+ FK
Sbjct: 121 LARHYQARGLKACLVCADTFRAGAFDQLKQNATKAKIPYYGSLTETDPAVVAREGVDKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KE ++IIVDTSGRH+QE LF+EM + +A + PD I V+D+SIGQ A QA+AFK++
Sbjct: 181 KERFEVIIVDTSGRHRQEENLFQEMVDI-QAAIKPDETIMVLDASIGQQAESQAKAFKEA 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
GA+I+TK DGHA GGGA+SAVAAT +P++FIGTGEHM +FE F + FV +LLGMGD
Sbjct: 240 ADFGAIIITKTDGHAHGGGAISAVAATHTPIVFIGTGEHMLDFERFAPQQFVQKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
+ ++ + + +DQ+ + ++ ++EG FT+R + +Q NI+KMGP+ ++ M+PG S
Sbjct: 300 MASLVEHVQS-LKLDQK-DTMKHITEGIFTVRDLRDQLSNIMKMGPLSKMAGMIPGMSG- 356
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEM 419
+M ++E K+KR + + DSMT++ELDS +R+ R+ARGSG VREV ++
Sbjct: 357 MMQGMDDEEGSLKLKRMIYICDSMTDKELDSDGKMFTEQPTRMTRVARGSGTSVREVEDL 416
Query: 420 LEEYKRLAKIWSKMKG 435
L + + +A + KM G
Sbjct: 417 LTQQRMMAGMAKKMGG 432
>gi|402225128|gb|EJU05189.1| signal recognition particle protein [Dacryopinax sp. DJM-731 SS1]
Length = 558
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 239/523 (45%), Positives = 340/523 (65%), Gaps = 40/523 (7%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ AI ++ + ID+K L+ L EI ALL++DV KLV +++ ++ V
Sbjct: 1 MVLADLGRRINSAISSLNRSPTIDDKQLDAALKEICTALLESDVNVKLVASLRSRVRTKV 60
Query: 61 NLD-----DLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKT 115
D A +R ++Q+ +F+EL +++PG + PKKG+ ++IM VGLQG+GKT
Sbjct: 61 KAALEGGADKAKEAQRRNVVQKTVFDELVSLVNPGVEPYKPKKGQSNIIMAVGLQGNGKT 120
Query: 116 TTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEG 175
TTCTK A Y+QK+G+K +VCADTFRAGAFDQ +Q+ATKAK+ ++GSYTE+DPV IA +G
Sbjct: 121 TTCTKLAVYYQKRGFKSCIVCADTFRAGAFDQTRQSATKAKVAYFGSYTETDPVVIAAQG 180
Query: 176 VETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQ 235
VE F+KE ++IIVDTSGRHKQE LF EM Q+S A V PD+ I V+D+SIGQAA Q++
Sbjct: 181 VEKFRKERFEIIIVDTSGRHKQEKDLFAEMEQIS-AAVKPDMTILVLDASIGQAAEAQSR 239
Query: 236 AFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRL 295
AFK++ GA+IVTKMDGHAKGGGA+SAVAAT++P+IF+GTGEH+ + E F +PF+S++
Sbjct: 240 AFKEAADFGAIIVTKMDGHAKGGGAISAVAATQTPIIFLGTGEHLSDLERFAPEPFISKM 299
Query: 296 LGMGDWSGFMDKIHEVVPMD--QQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSM 353
LGMGD G ++++ E+ D +Q E+++ L +G F+++ EQ N++ MG I + SM
Sbjct: 300 LGMGDIQGLVEQMQEMAQRDPEKQKEVMKNLEQGKFSIKDWREQMGNVMSMGSISKFASM 359
Query: 354 LPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMN-----------DSRI 402
+PG G E+E +K KR + M DSMT EL+S ++ + R
Sbjct: 360 IPGLPDM---AGSEEEISSKFKRMIYMTDSMTAYELESDGLCFVDMEKDGKTPIGVNWRA 416
Query: 403 MRIARGSGRQVREVMEMLEEYKRLAKI---------W----SKMKGLKIPKKGEMSALSR 449
R+ARGSG V EV EML +Y+ +A + W KM+ K + +
Sbjct: 417 QRVARGSGTSVAEVEEMLFQYRMMANMAKGAGGKNGWIQAMQKMQAAAGGKGRGPNGMPS 476
Query: 450 NMNAQHMSKVLPQGMLKQI--GGVGGLQNLMKQM---GSTKDM 487
Q M K LP GML+++ GG+GG+Q++M+QM G DM
Sbjct: 477 PAQIQAMQKALPPGMLQKLRSGGMGGIQDMMRQMMPGGEMPDM 519
>gi|315049435|ref|XP_003174092.1| signal recognition particle protein [Arthroderma gypseum CBS
118893]
gi|311342059|gb|EFR01262.1| signal recognition particle protein [Arthroderma gypseum CBS
118893]
Length = 543
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 231/475 (48%), Positives = 321/475 (67%), Gaps = 8/475 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ + +DEK L+ + EI ALL ADV +LV++++ +IK V
Sbjct: 1 MVLQDLGRRINAAVSDLTRSNTVDEKALDAMIKEICAALLSADVNVRLVQQLRKSIKAAV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
L + NK+R+IQ+A+F++L ++DP F PKKGKP+VIM VGLQG+GKTTTCTK
Sbjct: 61 QLPSIPPAVNKKRLIQKAVFDQLVALVDPHAEPFKPKKGKPNVIMMVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q KG+K ALVCADTFRAGAFDQLKQNATKAKIP+YGS T++DPV ++ EGV FK
Sbjct: 121 LARHYQTKGFKAALVCADTFRAGAFDQLKQNATKAKIPYYGSLTQTDPVVVSSEGVAKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KE D+IIVDTSGRH+QE LFEEM Q+ +A + PD I V+DS+IGQAA Q+ AFK +
Sbjct: 181 KERFDIIIVDTSGRHRQEEDLFEEMTQI-QAAIKPDQTIMVLDSTIGQAAETQSAAFKSA 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
GA+I+TK DGHA GGGA+SAVAAT++P+IF+GTGEHM + E F +PFV +LLGMGD
Sbjct: 240 ADFGAIIITKTDGHAAGGGAISAVAATRTPIIFLGTGEHMLDLERFAPQPFVQKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQ-QPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSS 359
+ ++ + V E + +SEG FTLR E +I+KMGP+ ++ SM+PG S+
Sbjct: 300 MASLVEHVQAVTKDSAGAKETYKHISEGIFTLRDFRENITSIMKMGPLSKISSMIPGLSN 359
Query: 360 ELMPKGREKESQA-KIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVM 417
+ G + E + K++R + + DSMT ELD ++ +RI+R+A GSG VREV
Sbjct: 360 --ITSGLDDEDGSLKLRRMIYIFDSMTAPELDGDGKVFVDQPTRIVRLACGSGTTVREVE 417
Query: 418 EMLEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQIGGVG 472
++L ++K +A + K+ G K + + L Q M+ + Q + +GG G
Sbjct: 418 DLLSQHKMMAGMAKKVGGQKKQMQRAQNMLKGGNKEQQMAAM--QKRMAAMGGAG 470
>gi|58267554|ref|XP_570933.1| Signal recognition particle 54 kDa protein [Cryptococcus neoformans
var. neoformans JEC21]
gi|134112227|ref|XP_775089.1| hypothetical protein CNBE3630 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50257741|gb|EAL20442.1| hypothetical protein CNBE3630 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57227167|gb|AAW43626.1| Signal recognition particle 54 kDa protein, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 591
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 234/482 (48%), Positives = 330/482 (68%), Gaps = 26/482 (5%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKI- 59
MVLA LG + A Q+S A++ID+KV++ L E+ ALL++DV KLV ++T +K
Sbjct: 1 MVLADLGTRLHGAWNQLSKASVIDDKVIDGVLKELCAALLESDVNVKLVASLRTKVKTKV 60
Query: 60 ---VNLDDLAAGH--NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGK 114
+ + A G NK+ ++Q+A+F+EL ++DPG + P KGK +V+M VG+QG+GK
Sbjct: 61 KKSLEESEKAGGREANKKNVVQKAVFDELVALVDPGTEPYKPVKGKTNVLMAVGIQGAGK 120
Query: 115 TTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVE 174
TTTCTK A ++Q++G++ LVCADTFRAGAFDQLKQNATKAKIPFYGSYTE+DPV IA
Sbjct: 121 TTTCTKLAVHYQRRGFRTCLVCADTFRAGAFDQLKQNATKAKIPFYGSYTETDPVAIASL 180
Query: 175 GVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQA 234
GVE F+KE D+IIVDTSGRHKQE+ LFEEM + A V PD+ + V+D+SIGQAA Q+
Sbjct: 181 GVEKFRKERFDVIIVDTSGRHKQESELFEEMVAIG-AAVKPDMTLMVLDASIGQAAEGQS 239
Query: 235 QAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSR 294
+AFK S GA+IVTK+DGHAKGGGA+SAVAATK+P+IF+GTGEH+++ E F +PF+S+
Sbjct: 240 RAFKDSADFGAIIVTKLDGHAKGGGAISAVAATKTPIIFLGTGEHLNDLERFAPQPFISK 299
Query: 295 LLGMGDWSGFMDKIHEVVPM--DQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFS 352
LLGMGD G ++ + ++ D+Q +L +KL +G FT+R EQ NI+ MG I ++ S
Sbjct: 300 LLGMGDMQGLVEHMQDMARANPDRQKDLAKKLEQGKFTIRDWREQLSNIMNMGSISKIAS 359
Query: 353 MLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSS-----------NPKLMNDSR 401
M+PG + +M G E+E+ AK+KR + + D+M +ELDS NP +N R
Sbjct: 360 MIPGLPAGIM-DGNEEEASAKLKRLIFITDAMRADELDSDGSIFVSYDKQGNPVGLN-KR 417
Query: 402 IMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLP 461
R+A+GSG +RE+ ++L + + +A + + G + G MSA+ + A + P
Sbjct: 418 AKRVAKGSGTSLRELEDLLVQARMMAGMAKQAGG----QNGWMSAMQKMQAAAGGKPLGP 473
Query: 462 QG 463
G
Sbjct: 474 NG 475
>gi|302896050|ref|XP_003046905.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256727833|gb|EEU41192.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 518
Score = 443 bits (1140), Expect = e-122, Method: Compositional matrix adjust.
Identities = 226/436 (51%), Positives = 310/436 (71%), Gaps = 9/436 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ +DEK EI ALL+ADV +LV +++ +I+ V
Sbjct: 1 MVLQDLGRRINAAVNNLTREQNLDEK----AGPEICAALLEADVNVRLVGQLRKSIRTTV 56
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N +L NK+R+IQ+A+F+EL K++DP SF PKKGK SVIMFVGLQG+GKTTTCTK
Sbjct: 57 NFKELPPAVNKKRLIQKAVFDELVKLVDPHADSFRPKKGKSSVIMFVGLQGAGKTTTCTK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G+K LVCADTFRAGAFDQLKQNATKAKIP+YGS TE+DP +A GVE FK
Sbjct: 117 LARHYQSRGFKSCLVCADTFRAGAFDQLKQNATKAKIPYYGSLTETDPAVVARAGVEQFK 176
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
K+ ++IIVDTSGRH+QE+ALF+EM + A + PD I V+D+SIGQ A QA+AFK++
Sbjct: 177 KDRFEVIIVDTSGRHRQESALFQEMIDIQNA-IQPDETIMVLDASIGQQAESQAKAFKEA 235
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
GA+I+TK DGHA GGGA+SAVAAT +P++FIGTGEHM + E F + FV +LLGMGD
Sbjct: 236 ADFGAIIITKTDGHAHGGGAISAVAATHTPIVFIGTGEHMLDLEKFAPQQFVQKLLGMGD 295
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
+G M+ + + Q + ++ + EG FT+R + +Q NI+KMGP+ ++ M+PG S+
Sbjct: 296 MAGLMEHVQSLNL--NQKDTIKHIQEGIFTVRDLRDQLSNIMKMGPLSKMAGMIPGMSN- 352
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEM 419
+M ++E AK+KR + + DSMT++ELDS L++ SR+ RIARGSG VREV ++
Sbjct: 353 MMQGMDDEEGGAKLKRMIYICDSMTDKELDSDGKILIDQPSRMTRIARGSGTSVREVEDL 412
Query: 420 LEEYKRLAKIWSKMKG 435
L + + +A + KM G
Sbjct: 413 LTQQRMMAGMAKKMGG 428
>gi|389628338|ref|XP_003711822.1| signal recognition particle protein [Magnaporthe oryzae 70-15]
gi|351644154|gb|EHA52015.1| signal recognition particle protein [Magnaporthe oryzae 70-15]
Length = 510
Score = 443 bits (1139), Expect = e-121, Method: Compositional matrix adjust.
Identities = 224/437 (51%), Positives = 317/437 (72%), Gaps = 13/437 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ A +DEK +I ALL+ADV +LV +++ +IK V
Sbjct: 1 MVLQDLGRRINAAVSDLTRAPNLDEKA------KICAALLEADVNVRLVGQLRKSIKSTV 54
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N +L NK+R+IQ+A+F+EL ++DP F PKKGK +VIMFVGLQG+GKTTTCTK
Sbjct: 55 NFKELPPAVNKKRLIQKAVFDELVSLVDPHAEPFKPKKGKSNVIMFVGLQGAGKTTTCTK 114
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G+K LVCADTFRAGAFDQLKQNATKAKIP+YGS TE+DP +A EGV+ FK
Sbjct: 115 LARHYQSRGFKACLVCADTFRAGAFDQLKQNATKAKIPYYGSLTETDPAVVAREGVDKFK 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KE ++IIVDTSGRH+QE+ALF+EM + +A V PD I V+D+SIGQ A QA+AFK++
Sbjct: 175 KERFEVIIVDTSGRHRQESALFQEMMDIQKA-VKPDETIMVLDASIGQQAEAQAKAFKEA 233
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
GA+I+TK DGHA GGGA+SAVAAT +P++FIGTGEHM + E F + F+S+LLGMGD
Sbjct: 234 ADFGAIIITKTDGHASGGGAISAVAATHTPIVFIGTGEHMLDLERFAPQQFISKLLGMGD 293
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
+G ++ + + +DQ+ + ++ ++EG FT+R + +Q QNI+KMGP+ ++ M+PG S+
Sbjct: 294 MAGLVEHVQS-LKLDQK-DTIKHITEGIFTIRDLRDQLQNIMKMGPLSKMAGMIPGMSN- 350
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND--SRIMRIARGSGRQVREVME 418
+M ++E K+KR + + DSMT++ELD S+ K+ + +R+ R+ARGSG VREV +
Sbjct: 351 MMQGMDDEEGTGKLKRMIYICDSMTDKELD-SDGKIFTEQPTRMTRVARGSGTHVREVED 409
Query: 419 MLEEYKRLAKIWSKMKG 435
+L + + +A + KM G
Sbjct: 410 LLTQQRMMAGMAKKMGG 426
>gi|223993863|ref|XP_002286615.1| SRP54, signal recognition particle 54 kDa protein 2-like protein
[Thalassiosira pseudonana CCMP1335]
gi|220977930|gb|EED96256.1| SRP54, signal recognition particle 54 kDa protein 2-like protein
[Thalassiosira pseudonana CCMP1335]
Length = 451
Score = 443 bits (1139), Expect = e-121, Method: Compositional matrix adjust.
Identities = 226/452 (50%), Positives = 319/452 (70%), Gaps = 21/452 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNAT--IIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKK 58
MVLA+LGG + +++++ + + I + LN L+EI+RAL+++DV KLV +++NI+K
Sbjct: 1 MVLAELGGKLRDSLRKLQSPSGDAITAETLNGILSEISRALIESDVNVKLVMTLRSNIQK 60
Query: 59 IVN-------LDDLAAGHNKRRIIQQAIFNELCKMLDP----GKPSFTPKKGKPSVIMFV 107
V + A N R++Q+A+ +EL ML P ++ K+GKP++I+FV
Sbjct: 61 KVGALVSSDNANSAANNANIARLVQRAVVDELTSMLTPNGENATKAYVMKRGKPNIILFV 120
Query: 108 GLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESD 167
GLQG+GKTT+ KYA+Y+Q+KGWK A+VCADTFRAGAFDQLKQNATK +IPFYGSYTE+D
Sbjct: 121 GLQGAGKTTSIAKYAHYYQRKGWKTAMVCADTFRAGAFDQLKQNATKLRIPFYGSYTEAD 180
Query: 168 PVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIG 227
PV IA EGVE F + ++IIVDTSGRH+QE LFEEM+++S A V PD IFVMD++ G
Sbjct: 181 PVLIAEEGVERFISDGYEIIIVDTSGRHRQEETLFEEMQEIS-AAVRPDNTIFVMDATQG 239
Query: 228 QAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFD 287
QA +DQA AF +V+VG+VIVTK+DGHAKGGGALSAV+AT SP++F+G+GE ++ + F+
Sbjct: 240 QAVYDQALAFHGAVNVGSVIVTKLDGHAKGGGALSAVSATGSPIVFLGSGERFEDLDPFN 299
Query: 288 VKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPI 347
K FVS+LLG GD G M+++ + Q EL++ + +G FTLR MY+QFQ ++K+GP+
Sbjct: 300 AKSFVSKLLGFGDVRGLMEEMKSLNSDKNQEELMKNMQKGQFTLRDMYKQFQQVMKIGPL 359
Query: 348 GQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELD------SSNPKLMNDSR 401
+V MLPG LMP+ + ES +++++M MMDSM + ELD + N K + + R
Sbjct: 360 NKVMGMLPGMPEYLMPQNGDDESTNRLRKFMYMMDSMNDAELDGKIDLHAKNDKSV-EKR 418
Query: 402 IMRIARGSGRQVREVMEMLEEYKRLAKIWSKM 433
I RIA GSG EV +L+ +K+ + SKM
Sbjct: 419 INRIAAGSGTHPTEVKMLLQAHKQFEGMVSKM 450
>gi|406606416|emb|CCH42190.1| Signal recognition particle subunit SRP54 [Wickerhamomyces
ciferrii]
Length = 533
Score = 443 bits (1139), Expect = e-121, Method: Compositional matrix adjust.
Identities = 218/437 (49%), Positives = 317/437 (72%), Gaps = 5/437 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ + +++ ++ L EI ALL++DV KLV +++ +IK +
Sbjct: 1 MVLVDLGRRINTAVSGAIKSNEVNDDAIDLMLKEICNALLESDVNVKLVVKLRKDIKHKL 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N + G NK+++IQ+ +F+ELC+++D + PKKGK +VIMFVGLQG+GKTT+CTK
Sbjct: 61 NAEGEKPGINKKKLIQKVVFDELCRLVDTETEPYKPKKGKSNVIMFVGLQGAGKTTSCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A Y+Q++G+K LVCADTFRAGAFDQLKQNATKA+IPFYGSYTE++PV+++ +GV+ FK
Sbjct: 121 LAVYYQRRGFKVGLVCADTFRAGAFDQLKQNATKARIPFYGSYTETNPVKVSKDGVDKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KE D+IIVDTSGRH+QE LF+EM ++ EA V P+ I V+D+SIGQAA Q++AFK+S
Sbjct: 181 KEKFDIIIVDTSGRHRQEEDLFQEMIEIGEA-VEPNQTIMVLDASIGQAAESQSKAFKES 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
+ G++I+TK+DGHAKGGGA+SAVAAT +P++FIGTGEH+ +FE F + F+S+LLG+GD
Sbjct: 240 SNFGSIILTKLDGHAKGGGAISAVAATNTPIVFIGTGEHVQDFETFSPRSFISKLLGIGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G M+ + + +D + + ++ L EG FTL +Q QNI+KMGP+ Q+ +M+PG
Sbjct: 300 IQGLMEHVQS-LDLDNK-DTMKNLQEGKFTLNDFQKQMQNIMKMGPLSQIANMIPGMGQM 357
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEM 419
L G E E+ K+KR + +MDSMT +ELDS +N+ +RI+R+A+GSG EV +
Sbjct: 358 LGQVG-EDEASNKMKRMVYIMDSMTKKELDSDGQIFINEPTRIIRVAQGSGTSATEVEMI 416
Query: 420 LEEYKRLAKIWSKMKGL 436
L + + +A + + KG+
Sbjct: 417 LMQQRMMATMAQRTKGM 433
>gi|358392739|gb|EHK42143.1| hypothetical protein TRIATDRAFT_31697 [Trichoderma atroviride IMI
206040]
Length = 519
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 223/436 (51%), Positives = 309/436 (70%), Gaps = 12/436 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ +DEK EI ALL+ADV +LV +++ +I+ V
Sbjct: 1 MVLQDLGRRINAAVSNLTREQNLDEK-------EICAALLEADVNVRLVGQLRKSIRGAV 53
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N +L NK+R+IQ+A+F+EL K++DP F PKKGK +VIMFVGLQG+GKTTTCTK
Sbjct: 54 NFKELPPAVNKKRLIQKAVFDELVKLVDPHAEPFKPKKGKSNVIMFVGLQGAGKTTTCTK 113
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G + LVCADTFRAGAFDQLKQNATKAKIP+YGS TE+DP +A GVE FK
Sbjct: 114 LARHYQSRGLRACLVCADTFRAGAFDQLKQNATKAKIPYYGSLTETDPAAVARAGVEQFK 173
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
K+ D+IIVDTSGRH+QE+ALF+EM + +A VNPD I V+D+SIGQ A QA+AFK++
Sbjct: 174 KDKFDVIIVDTSGRHRQESALFQEMIDI-QAAVNPDETIMVLDASIGQQAESQAKAFKEA 232
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
GA+I+TK DGHA GGGA+SAVAAT +P++FIGTGEHM + E F+ + FV +LLGMGD
Sbjct: 233 ADFGAIIITKTDGHAHGGGAISAVAATHTPIVFIGTGEHMLDLERFEPQRFVQKLLGMGD 292
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
+G ++ + + Q + ++ + EG FT+R + +Q NI+KMGP+ ++ M+PG S
Sbjct: 293 MAGLVEHVQSLNL--NQKDTMKHIQEGIFTVRDLRDQLSNIMKMGPLSKMAGMIPGMSG- 349
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEM 419
LM ++E K+KR + + DSMT++ELDS +++ +R+ RIARGSG VREV ++
Sbjct: 350 LMQGMDDEEGGLKLKRMIYICDSMTDKELDSDGKMFIDEPTRMTRIARGSGTSVREVEDL 409
Query: 420 LEEYKRLAKIWSKMKG 435
L + + +A + KM G
Sbjct: 410 LTQQRMMAGMAKKMGG 425
>gi|296817061|ref|XP_002848867.1| signal recognition particle protein [Arthroderma otae CBS 113480]
gi|238839320|gb|EEQ28982.1| signal recognition particle protein [Arthroderma otae CBS 113480]
Length = 535
Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust.
Identities = 220/439 (50%), Positives = 305/439 (69%), Gaps = 4/439 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ + +DEK L+ + EI ALL ADV +LV++++ +IK V
Sbjct: 1 MVLQDLGRRINAAVSDLTRSNTVDEKALDAMIKEICAALLSADVNVRLVQQLRKSIKAAV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
L + NK+R+IQ+A+F++L ++DP F PKKGK +VIM VGLQG+GKTTTCTK
Sbjct: 61 QLPSIPPAVNKKRLIQKAVFDQLVALVDPHAEPFKPKKGKSNVIMMVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q KG+K ALVCADTFRAGAFDQLKQNATKAKIP+YGS T++DPV ++ EGV FK
Sbjct: 121 LARHYQTKGFKAALVCADTFRAGAFDQLKQNATKAKIPYYGSLTQTDPVIVSSEGVAKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KE D+IIVDTSGRH+QE LF EM Q+ +A + PD I V+DS+IGQAA Q+ AFK +
Sbjct: 181 KERFDIIIVDTSGRHRQEEDLFAEMTQI-QAAIKPDQTIMVLDSTIGQAAESQSAAFKSA 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
GA+I+TK DGHA GGGA+SAVAAT++P+IF+GTGEHM + E F +PF+ +LLGMGD
Sbjct: 240 ADFGAIIITKTDGHAAGGGAISAVAATRTPIIFLGTGEHMLDLERFAPQPFIQKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQ-QPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSS 359
+ ++ + V E + +SEG FTLR E +I+KMGP+ ++ SM+PG S+
Sbjct: 300 MASLVEHVQAVTKDSAGAKETYKHISEGIFTLRDFRENITSIMKMGPLSKISSMIPGLSN 359
Query: 360 ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVME 418
L +++ K++R + + DSMT ELD ++ +RI+R+A GSG VREV +
Sbjct: 360 -LTSGLDDEDGSLKLRRMIYIFDSMTASELDGDGKVFIDQPTRIVRLACGSGTTVREVED 418
Query: 419 MLEEYKRLAKIWSKMKGLK 437
+L ++K +A + K+ G K
Sbjct: 419 LLSQHKMMAGMAKKVGGQK 437
>gi|303319737|ref|XP_003069868.1| signal recognition particle protein, putative [Coccidioides
posadasii C735 delta SOWgp]
gi|240109554|gb|EER27723.1| signal recognition particle protein, putative [Coccidioides
posadasii C735 delta SOWgp]
Length = 530
Score = 440 bits (1131), Expect = e-121, Method: Compositional matrix adjust.
Identities = 223/439 (50%), Positives = 301/439 (68%), Gaps = 4/439 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ + +DEKV + L EI ALL ADV +LV+ ++ +IK V
Sbjct: 1 MVLQDLGRRINAAVSDLTRSNDLDEKVFDSMLKEICAALLSADVNVRLVQNLRKSIKSSV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N + NK+R+IQ+A+F++L ++DP F PKKG+ +VIMFVGLQG+GKTTTCTK
Sbjct: 61 NFSSIPPAVNKKRLIQKAVFDQLVALVDPHSEPFKPKKGRSNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G+K ALVCADTFRAGAFDQLKQNATKAKIP+YGS T++DP +A +GV FK
Sbjct: 121 LARHYQTRGFKSALVCADTFRAGAFDQLKQNATKAKIPYYGSLTQTDPAIVAADGVAKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KE ++IIVDTSGRHKQE LF EM Q+ A V PD I V+DSSIGQAA Q+ AFK +
Sbjct: 181 KEKFEVIIVDTSGRHKQEEDLFAEMTQIQNA-VKPDQTILVLDSSIGQAAEAQSAAFKAT 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
GA+I+TK DGHA GGGA+SAVAAT +P+IF+GTGEHM + E F KPF+ +LLGMGD
Sbjct: 240 ADFGAIIITKTDGHAAGGGAISAVAATHTPIIFLGTGEHMLDLERFAPKPFIQKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQ-QPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSS 359
+ ++ + V E + +SEG FTLR E +I+KMGP+ ++ SM+PG S
Sbjct: 300 MASLVEHVQAVTKDSAGAKETYKHISEGIFTLRDFRENITSIMKMGPLSKISSMIPGLSG 359
Query: 360 ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVME 418
L +++ K++R + + DSMT ELD ++ SRI+R+A GSG VREV +
Sbjct: 360 -LTAGLDDEDGSLKLRRMIYIFDSMTAAELDGDGKVFVDQPSRIVRVACGSGTTVREVED 418
Query: 419 MLEEYKRLAKIWSKMKGLK 437
+L ++K +A + K+ G K
Sbjct: 419 LLSQHKMMAGMAKKVGGQK 437
>gi|119183283|ref|XP_001242701.1| hypothetical protein CIMG_06597 [Coccidioides immitis RS]
gi|392865609|gb|EAS31408.2| signal recognition particle protein SRP54 [Coccidioides immitis RS]
Length = 530
Score = 440 bits (1131), Expect = e-120, Method: Compositional matrix adjust.
Identities = 223/439 (50%), Positives = 301/439 (68%), Gaps = 4/439 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ + +DEKV + L EI ALL ADV +LV+ ++ +IK V
Sbjct: 1 MVLQDLGRRINAAVSDLTRSNDLDEKVFDSMLKEICAALLSADVNVRLVQNLRKSIKSSV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N + NK+R+IQ+A+F++L ++DP F PKKG+ +VIMFVGLQG+GKTTTCTK
Sbjct: 61 NFSSIPPAVNKKRLIQKAVFDQLVALVDPHTEPFKPKKGRSNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G+K ALVCADTFRAGAFDQLKQNATKAKIP+YGS T++DP +A +GV FK
Sbjct: 121 LARHYQTRGFKSALVCADTFRAGAFDQLKQNATKAKIPYYGSLTQTDPAIVAADGVAKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KE ++IIVDTSGRHKQE LF EM Q+ A V PD I V+DSSIGQAA Q+ AFK +
Sbjct: 181 KEKFEVIIVDTSGRHKQEEDLFAEMTQIQNA-VKPDQTILVLDSSIGQAAEAQSAAFKAT 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
GA+I+TK DGHA GGGA+SAVAAT +P+IF+GTGEHM + E F KPF+ +LLGMGD
Sbjct: 240 ADFGAIIITKTDGHAAGGGAISAVAATHTPIIFLGTGEHMLDLERFAPKPFIQKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQ-QPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSS 359
+ ++ + V E + +SEG FTLR E +I+KMGP+ ++ SM+PG S
Sbjct: 300 MASLVEHVQAVTKDSAGAKETYKHISEGIFTLRDFRENITSIMKMGPLSKISSMIPGLSG 359
Query: 360 ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVME 418
L +++ K++R + + DSMT ELD ++ SRI+R+A GSG VREV +
Sbjct: 360 -LTAGLDDEDGSLKLRRMIYIFDSMTAAELDGDGKVFVDQPSRIVRVACGSGTTVREVED 418
Query: 419 MLEEYKRLAKIWSKMKGLK 437
+L ++K +A + K+ G K
Sbjct: 419 LLSQHKMMAGMAKKVGGQK 437
>gi|255949096|ref|XP_002565315.1| Pc22g13910 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211592332|emb|CAP98679.1| Pc22g13910 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 522
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 222/440 (50%), Positives = 304/440 (69%), Gaps = 6/440 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ + +DEK ++ L EI ALL ADV +LV ++ +IK V
Sbjct: 1 MVLQDLGRRINSAVNDLTRSNNLDEKAFDDMLKEICAALLSADVNVRLVGTLRKSIKASV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N L A NK+R+IQ+ +F+EL K++DP SF PKKG+ +VIMFVGLQG+GKTTTCTK
Sbjct: 61 NFASLPAAVNKKRLIQKTVFDELVKLVDPHADSFRPKKGRSNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G+K ALVCADTFRAGAFDQLKQNATKAKIP+YGS T++DP +A EGV FK
Sbjct: 121 LARHYQTRGFKTALVCADTFRAGAFDQLKQNATKAKIPYYGSLTQTDPAVVAAEGVAKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KE D+IIVDTSGRH+QE LF EM Q+ A V PD I V+DS+IGQAA Q+ AFK +
Sbjct: 181 KERFDIIIVDTSGRHRQEEELFTEMTQIQTA-VTPDQTILVLDSTIGQAAEAQSAAFKAT 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
GA+I+TK DGHA GGGA+SAVAAT +P+IF+GTGEHM + E F+ + FV +LLGMGD
Sbjct: 240 ADFGAIIITKTDGHAAGGGAISAVAATHTPIIFLGTGEHMMDLERFEPRAFVQKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQ-QPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSS 359
+G ++ + + E + ++EG +TLR E +I+KMGP+ ++ M+PG S+
Sbjct: 300 VAGLVEHVQAMTKDSAGAKETYKHIAEGIYTLRDFRENITSIMKMGPLSKLSGMIPGLSN 359
Query: 360 ELMPKGREKESQA-KIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVM 417
M +G + E + K++R + + DSMT ELD + SR++RIA GSG VREV
Sbjct: 360 --MTQGLDDEDGSLKLRRMVYIFDSMTVAELDGDGKNFVEQPSRMVRIAHGSGTTVREVE 417
Query: 418 EMLEEYKRLAKIWSKMKGLK 437
++L +++ +A + ++ G K
Sbjct: 418 DLLSQHRMMAGMAKRVGGQK 437
>gi|212535310|ref|XP_002147811.1| signal recognition particle protein SRP54 [Talaromyces marneffei
ATCC 18224]
gi|210070210|gb|EEA24300.1| signal recognition particle protein SRP54 [Talaromyces marneffei
ATCC 18224]
Length = 537
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 218/437 (49%), Positives = 303/437 (69%), Gaps = 4/437 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ + +DEK ++ L EI ALL ADV +LV+ ++ +IK V
Sbjct: 1 MVLQDLGRRINAAVNDLTRSNTLDEKAFDDMLKEICSALLSADVNVRLVQNLRKSIKHSV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N L + NK+R+IQ+A+F+EL +++P F PKKG+ +VIMFVGLQG+GKTTTCTK
Sbjct: 61 NFSSLPSAVNKKRLIQKAVFDELVALVNPHADPFKPKKGRVNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G+K ALVCADTFRAGAFDQLKQNA KAKIP+YGS T++DPV +A EGV FK
Sbjct: 121 LARHYQMRGFKTALVCADTFRAGAFDQLKQNAIKAKIPYYGSLTQTDPVVVAAEGVAQFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KE D+IIVDTSGRHKQE LFEEM Q+ A V PD I V+DS+IGQAA Q+ AFK +
Sbjct: 181 KERFDIIIVDTSGRHKQEEDLFEEMTQIQNA-VRPDQTILVLDSTIGQAAEAQSSAFKAT 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
GA+I+TK DGHA GGGA+SAVAAT +P+IF+GTGEHM + E F+ K F+ +LLGMGD
Sbjct: 240 ADFGAIIITKTDGHAAGGGAISAVAATHTPIIFLGTGEHMMDLERFEPKAFIQKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQ-QPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSS 359
+G ++ + + E + +SEG +T+R E +I+KMGP+ ++ M+PG S+
Sbjct: 300 MAGLVEHVQAITKDSAGAKETYKHISEGIYTIRDFRENITSIMKMGPLSKISGMIPGLSN 359
Query: 360 ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVME 418
+ +++ K++R + + DSMT ELDS + SRI+R+A GSG VREV +
Sbjct: 360 -ITAGLDDEDGTMKLRRMIYLFDSMTTAELDSDGKLFVEQPSRIVRVACGSGTTVREVED 418
Query: 419 MLEEYKRLAKIWSKMKG 435
+L +++ +A + ++ G
Sbjct: 419 LLSQHRMMAGMAKRVGG 435
>gi|320034158|gb|EFW16103.1| signal recognition particle protein SRP54 [Coccidioides posadasii
str. Silveira]
Length = 530
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 222/439 (50%), Positives = 301/439 (68%), Gaps = 4/439 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ + +DEKV + L EI ALL ADV +LV+ ++ +IK V
Sbjct: 1 MVLQDLGRRINAAVSDLTRSNDLDEKVFDSMLKEICAALLSADVNVRLVQNLRKSIKSSV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N + NK+R+IQ+A+F++L ++DP F PKKG+ +VIMFVGLQG+GKTTTCTK
Sbjct: 61 NFSSIPPAVNKKRLIQKAVFDQLVALVDPHSEPFKPKKGRSNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G+K ALVCADTFRAGAFDQLKQNATKAKIP+YGS T++DP +A +GV FK
Sbjct: 121 LARHYQTRGFKSALVCADTFRAGAFDQLKQNATKAKIPYYGSLTQTDPAIVAADGVAKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KE ++IIVDTSGRHKQE LF EM Q+ A V PD I V+DSSIGQAA Q+ AFK +
Sbjct: 181 KEKFEVIIVDTSGRHKQEEDLFAEMTQIQNA-VKPDQTILVLDSSIGQAAEAQSAAFKAT 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
GA+I+TK DGHA GGGA+SAVAAT +P+IF+GTGEHM + E F KPF+ +LLGMGD
Sbjct: 240 ADFGAIIITKTDGHAAGGGAISAVAATHTPIIFLGTGEHMLDLERFAPKPFIQKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQ-QPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSS 359
+ ++ + V E + ++EG FTLR E +I+KMGP+ ++ SM+PG S
Sbjct: 300 MASLVEHVQAVTKDSAGAKETYKHIAEGIFTLRDFRENITSIMKMGPLSKISSMIPGLSG 359
Query: 360 ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVME 418
L +++ K++R + + DSMT ELD ++ SRI+R+A GSG VREV +
Sbjct: 360 -LTAGLDDEDGSLKLRRMIYIFDSMTAAELDGDGKVFVDQPSRIVRVACGSGTTVREVED 418
Query: 419 MLEEYKRLAKIWSKMKGLK 437
+L ++K +A + K+ G K
Sbjct: 419 LLSQHKMMAGMAKKVGGQK 437
>gi|327294833|ref|XP_003232112.1| signal recognition particle 54K protein [Trichophyton rubrum CBS
118892]
gi|326466057|gb|EGD91510.1| signal recognition particle 54K protein [Trichophyton rubrum CBS
118892]
Length = 534
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 228/475 (48%), Positives = 318/475 (66%), Gaps = 8/475 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ + +DEK L+ + EI ALL ADV +LV++++ +IK V
Sbjct: 1 MVLQDLGRRINAAVSDLTRSNAVDEKALDAMIKEICAALLSADVNVRLVQQLRKSIKAAV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
L + NK+R+IQ+A+F++L ++DP F PKKGK +VIM VGLQG+GKTTTCTK
Sbjct: 61 QLPSIPPAVNKKRLIQKAVFDQLVALVDPHAEPFKPKKGKSNVIMMVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q KG+K ALVCADTFRAGAFDQLKQNATKAKIP+YGS T++DPV ++ EGV FK
Sbjct: 121 LARHYQTKGFKAALVCADTFRAGAFDQLKQNATKAKIPYYGSLTQTDPVVVSSEGVAKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KE D+IIVDTSGRH+QE LF EM Q+ A + PD I V+DS+IGQAA Q+ AFK +
Sbjct: 181 KERFDIIIVDTSGRHRQEEDLFAEMTQIQSA-IKPDQTIMVLDSTIGQAAETQSAAFKSA 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
GA+I+TK DGHA GGGA+SAVAAT++P+IF+GTGEHM + E F +PFV +LLGMGD
Sbjct: 240 ADFGAIIITKTDGHAAGGGAISAVAATRTPIIFLGTGEHMLDLERFAPRPFVQKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQ-QPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSS 359
+ ++ + V E + +SEG FTLR E +I+KMGP+ ++ SM+PG S+
Sbjct: 300 MASLVEHVQAVTKDSAGAKETYKHISEGIFTLRDFRENITSIMKMGPLSKISSMIPGLSN 359
Query: 360 ELMPKGREKESQA-KIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVM 417
+ G + E + K++R + + DSMT ELD ++ +R++R+A GSG VREV
Sbjct: 360 --ITSGLDDEDGSLKLRRMIYIFDSMTASELDGDGKVFIDQPTRVVRLACGSGTTVREVE 417
Query: 418 EMLEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQIGGVG 472
++L ++K +A + K+ G K + + L Q M+ + Q + +GG G
Sbjct: 418 DLLSQHKMMAGMAKKVGGQKKQMQRAQNMLKGGNKEQQMAAM--QKRMAAMGGAG 470
>gi|326469041|gb|EGD93050.1| signal recognition particle 54K protein [Trichophyton tonsurans CBS
112818]
Length = 534
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 228/475 (48%), Positives = 318/475 (66%), Gaps = 8/475 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ + +DEK L+ + EI ALL ADV +LV++++ +IK V
Sbjct: 1 MVLQDLGRRINAAVSDLTRSNAVDEKALDAMIKEICAALLSADVNVRLVQQLRKSIKAAV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
L + NK+R+IQ+A+F++L ++DP F PKKGK +VIM VGLQG+GKTTTCTK
Sbjct: 61 QLPSIPPAVNKKRLIQKAVFDQLVALVDPHAEPFKPKKGKSNVIMMVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q KG+K ALVCADTFRAGAFDQLKQNATKAKIP+YGS T++DPV ++ EGV FK
Sbjct: 121 LARHYQTKGFKAALVCADTFRAGAFDQLKQNATKAKIPYYGSLTQTDPVVVSSEGVAKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KE D+IIVDTSGRH+QE LF EM Q+ A + PD I V+DS+IGQAA Q+ AFK +
Sbjct: 181 KERFDIIIVDTSGRHRQEEDLFTEMTQIQSA-IKPDQTIMVLDSTIGQAAETQSAAFKSA 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
GA+I+TK DGHA GGGA+SAVAAT++P+IF+GTGEHM + E F +PFV +LLGMGD
Sbjct: 240 ADFGAIIITKTDGHAAGGGAISAVAATRTPIIFLGTGEHMLDLERFAPRPFVQKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQ-QPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSS 359
+ ++ + V E + +SEG FTLR E +I+KMGP+ ++ SM+PG S+
Sbjct: 300 MASLVEHVQAVTKDSAGAKETYKHISEGIFTLRDFRENITSIMKMGPLSKISSMIPGLSN 359
Query: 360 ELMPKGREKESQA-KIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVM 417
+ G + E + K++R + + DSMT ELD ++ +R++R+A GSG VREV
Sbjct: 360 --ITSGLDDEDGSLKLRRMIYIFDSMTASELDGDGKVFIDQPTRVVRLACGSGTTVREVE 417
Query: 418 EMLEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQIGGVG 472
++L ++K +A + K+ G K + + L Q M+ + Q + +GG G
Sbjct: 418 DLLSQHKMMAGMAKKVGGQKKQMQRAQNMLKGGNKEQQMAAM--QKRMAAMGGAG 470
>gi|242792738|ref|XP_002482016.1| signal recognition particle protein SRP54 [Talaromyces stipitatus
ATCC 10500]
gi|218718604|gb|EED18024.1| signal recognition particle protein SRP54 [Talaromyces stipitatus
ATCC 10500]
Length = 534
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 219/437 (50%), Positives = 302/437 (69%), Gaps = 4/437 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ + +DEK ++ L EI ALL ADV +LV+ ++ +IK V
Sbjct: 1 MVLQDLGRRINAAVSDLTRSNTVDEKAFDDMLKEICSALLSADVNVRLVQSLRKSIKHNV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N L + NK+R+IQ+A+F+EL +++P F PKKG+ +VIMFVGLQG+GKTTTCTK
Sbjct: 61 NFSSLPSAVNKKRLIQKAVFDELVALVNPHAEPFKPKKGRVNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G+K ALVCADTFRAGAFDQLKQNA KAKIP+YGS T++DPV +A EGV FK
Sbjct: 121 LARHYQMRGFKTALVCADTFRAGAFDQLKQNAIKAKIPYYGSLTQTDPVVVAAEGVAQFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KE D+IIVDTSGRHKQE LFEEM Q+ A V PD I V+DS+IGQAA Q+ AFK +
Sbjct: 181 KERFDIIIVDTSGRHKQEEDLFEEMTQIQNA-VRPDQTILVLDSTIGQAAEAQSSAFKAT 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
GA+I+TK DGHA GGGA+SAVAAT +P+IF+GTGEHM + E F+ K F+ +LLGMGD
Sbjct: 240 ADFGAIIITKTDGHAAGGGAISAVAATHTPIIFLGTGEHMMDLERFEPKAFIQKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQ-QPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSS 359
+G ++ + + E + +S G +TLR E +I+KMGP+ ++ M+PG S+
Sbjct: 300 MAGLVEHVQAITKDSAGAKETYKHISAGIYTLRDFRENITSIMKMGPLSKISGMIPGLSN 359
Query: 360 ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVME 418
+ +++ K++R + + DSMT ELDS + SRI+RIA GSG VREV +
Sbjct: 360 -ITAGLDDEDGTMKLRRMIYLFDSMTTAELDSDGKIFVEQPSRIVRIACGSGTTVREVED 418
Query: 419 MLEEYKRLAKIWSKMKG 435
+L +++ +A + ++ G
Sbjct: 419 LLSQHRMMAGMAKRVGG 435
>gi|308808356|ref|XP_003081488.1| signal recognition particle 54kDa subunit (ISS) [Ostreococcus
tauri]
gi|116059951|emb|CAL56010.1| signal recognition particle 54kDa subunit (ISS) [Ostreococcus
tauri]
Length = 559
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 241/542 (44%), Positives = 330/542 (60%), Gaps = 64/542 (11%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG +I+ A++++ +ID+ ++ L EI ALL ADV LV ++ N+ + V
Sbjct: 1 MVLNDLGNTITGALRRLQTRVVIDDDAVDGALKEICNALLSADVAVGLVVRLKKNVMRAV 60
Query: 61 NLDDL--AAGHNKRRIIQQAIFNELCKMLDPG---------------------------- 90
+ A G RR +++A+F EL +L+ G
Sbjct: 61 ETERASDAGGTRTRRTLERAVFKELANLLNGGGREDDQETPVSGPXXXXXXXKGSRAIGG 120
Query: 91 -------------KPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCA 137
P + PKKGK +V+MFVGLQG+GKTTTCTK+A+Y+ +KG+K ALVCA
Sbjct: 121 KRGREGGRRGEGNAPRWAPKKGKRNVVMFVGLQGAGKTTTCTKFAHYYARKGFKAALVCA 180
Query: 138 DTFRAGAFDQLKQNATKAKIPFYGSYTESD----------------PVRIAVEGVETFKK 181
DTFRAGAFD PF + D P +IA V F++
Sbjct: 181 DTFRAGAFDXXXXXXXVRPGPFGPVEPKRDQRPKIPVLRLVHPRAMPAKIARGWVARFEE 240
Query: 182 ENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSV 241
E DLIIVDTSGRH+QE ALFEEMR+++ T +P + IFVMDSSIGQ+A DQA AF +V
Sbjct: 241 EKMDLIIVDTSGRHRQEEALFEEMREIANVT-DPTMTIFVMDSSIGQSAADQANAFASTV 299
Query: 242 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 301
VG VI+TK+DGHAKGGGA+SAV+ TK+P++FIGTGEH+ E E FD FVS+LLGMGD
Sbjct: 300 DVGGVIMTKLDGHAKGGGAISAVSETKAPILFIGTGEHIGEMEPFDANSFVSKLLGMGDM 359
Query: 302 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 361
G ++K+ E+VP + L + G FT+R++YEQFQN+ MGPI + SM+PG +++
Sbjct: 360 KGLVEKMTEIVPEESAERLADAIGSGTFTMRLLYEQFQNLQNMGPISSLMSMVPGM-ADM 418
Query: 362 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLE 421
MPKG E+E ++K M +MDSMT+ ELD+ N K+ + R+ R+ARG+GR E++ +LE
Sbjct: 419 MPKGSEQEGTKRMKWMMVLMDSMTDAELDAPNSKIFDAKRMERVARGAGRSPHEMITLLE 478
Query: 422 EYKRLAKIWSKMKGLKIPK---KGEMSALSRNMNAQHMSKVLPQGMLKQIGGVGGLQNLM 478
E+KRL K+ KMKG+K P +G + M+ LP ML+ +GG GGLQN+M
Sbjct: 479 EHKRLGKMMGKMKGMKFPSGNARGRGNPQQMQQQMAQMANALPPDMLRMMGGAGGLQNMM 538
Query: 479 KQ 480
KQ
Sbjct: 539 KQ 540
>gi|326480631|gb|EGE04641.1| signal recognition particle protein [Trichophyton equinum CBS
127.97]
Length = 534
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 227/475 (47%), Positives = 318/475 (66%), Gaps = 8/475 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ + +DEK L+ + EI ALL ADV +LV++++ +IK V
Sbjct: 1 MVLQDLGRRINAAVSDLTRSNAVDEKALDAMIKEICAALLSADVNVRLVQQLRKSIKAAV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
L + NK+R+IQ+A+F++L ++DP F PKKGK +VIM VGLQG+GKTTTCTK
Sbjct: 61 QLPSIPPAVNKKRLIQKAVFDQLVALVDPHAEPFKPKKGKSNVIMMVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G+K ALVCADTFRAGAFDQLKQNATKAKIP+YGS T++DPV ++ EGV FK
Sbjct: 121 LARHYQTQGFKAALVCADTFRAGAFDQLKQNATKAKIPYYGSLTQTDPVVVSSEGVAKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KE D+IIVDTSGRH+QE LF EM Q+ A + PD I V+DS+IGQAA Q+ AFK +
Sbjct: 181 KERFDIIIVDTSGRHRQEEDLFTEMTQIQSA-IKPDQTIMVLDSTIGQAAETQSAAFKSA 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
GA+I+TK DGHA GGGA+SAVAAT++P+IF+GTGEHM + E F +PFV +LLGMGD
Sbjct: 240 ADFGAIIITKTDGHAAGGGAISAVAATRTPIIFLGTGEHMLDLERFAPRPFVQKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQ-QPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSS 359
+ ++ + V E + +SEG FTLR E +I+KMGP+ ++ SM+PG S+
Sbjct: 300 MASLVEHVQAVTKDSAGAKETYKHISEGIFTLRDFRENITSIMKMGPLSKISSMIPGLSN 359
Query: 360 ELMPKGREKESQA-KIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVM 417
+ G + E + K++R + + DSMT ELD ++ +R++R+A GSG VREV
Sbjct: 360 --ITSGLDDEDGSLKLRRMIYIFDSMTASELDGDGKVFIDQPTRVVRLACGSGTTVREVE 417
Query: 418 EMLEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQIGGVG 472
++L ++K +A + K+ G K + + L Q M+ + Q + +GG G
Sbjct: 418 DLLSQHKMMAGMAKKVGGQKKQMQRAQNMLKGGNKEQQMAAM--QKRMAAMGGAG 470
>gi|430812104|emb|CCJ30440.1| unnamed protein product [Pneumocystis jirovecii]
Length = 515
Score = 437 bits (1123), Expect = e-120, Method: Compositional matrix adjust.
Identities = 231/492 (46%), Positives = 332/492 (67%), Gaps = 26/492 (5%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M+L LG IS A+ ++ +DE V N L +I ALL+ DV LV++++ +IKK +
Sbjct: 1 MILGDLGRRISTALTELIKTQTVDESV-NVMLKKICSALLENDVNVDLVQKLRESIKKKI 59
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ NK+RII + +F+ELCK++D + P+KG ++I+ VGLQGSGKTT+C
Sbjct: 60 EFKKTTSVANKKRIIYKTVFDELCKLVDSSSEPYKPRKGFSNIILMVGLQGSGKTTSC-- 117
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A+++QKKG+K L+CADTFRAG+FDQLKQNATKAKIP++GSYTE++PV I+ EGVE FK
Sbjct: 118 LAHFYQKKGFKSCLICADTFRAGSFDQLKQNATKAKIPYFGSYTETNPVSISCEGVEKFK 177
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KE ++IIVDTSGRH+QE LFEEM Q+S A + P I V+D+SIGQAA Q++AFK+S
Sbjct: 178 KELFEIIIVDTSGRHRQEKELFEEMVQISNA-IKPHQTIMVLDASIGQAAESQSRAFKES 236
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V+ GA+++TKMDGHAKGGGALSA++A+K+P++FIGTGEH+ + E F F+S+LLGMGD
Sbjct: 237 VNFGAILLTKMDGHAKGGGALSAISASKTPIVFIGTGEHIYDLEKFVPNSFISKLLGMGD 296
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
GFM+ + ++Q + ++ + +G FT+R + + +I+KMGPI ++ SM+PG +
Sbjct: 297 IQGFMEHFQS-LKLEQSKDTIKNIEKGVFTIRDLKDHLGSIMKMGPINKLVSMIPGTAQ- 354
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEM 419
M +G E+ES K KR + +MDSMT +ELDS N+ SRI+RIA GSG V EV +
Sbjct: 355 -MMEGIEEESSRKFKRLIYIMDSMTEKELDSDGKIFTNEPSRIIRIAMGSGTSVSEVKGL 413
Query: 420 LEEYKRLAKIWSKMKGLKIPKKGEMSAL-SRNMNAQHMSKVLPQGMLKQIGGVGGLQNLM 478
L ++ +A I K+ GE L ++NMN +LK + +Q +
Sbjct: 414 LSQHHIMAGIAKKV--------GEKGGLKNQNMNPN---------LLKNPQQIASIQKRL 456
Query: 479 KQMGSTKDMMGM 490
+ +GS+ + GM
Sbjct: 457 QSIGSSSGIPGM 468
>gi|156554455|ref|XP_001604233.1| PREDICTED: signal recognition particle 54 kDa protein-like [Nasonia
vitripennis]
Length = 444
Score = 437 bits (1123), Expect = e-120, Method: Compositional matrix adjust.
Identities = 242/509 (47%), Positives = 330/509 (64%), Gaps = 83/509 (16%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +S+ATII+E+VLN L EI ALL++DV +LV+ ++ N++ ++
Sbjct: 1 MVLADLGRKITSALRSLSHATIINEEVLNSMLKEICAALLESDVNIRLVKNLRENVRSVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ DD+A G NKRR+IQ A+F EL K++DPG ++ P KG+P+VIMFVGLQGSGKTTTCTK
Sbjct: 61 DFDDMAGGLNKRRMIQSAVFKELVKLIDPGVKAYQPVKGRPNVIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++ KK WK LVCADTFRAGA+DQ+KQNATKA+IPFYGSYTE DPV IA EGV+ F
Sbjct: 121 LAYHYLKKNWKACLVCADTFRAGAYDQIKQNATKARIPFYGSYTEVDPVVIAQEGVDMFI 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KE ++IIVDTSGRHKQE +LFEEM QVS A V PD +IFVMD++IGQA QA+AFK+
Sbjct: 181 KEGYEIIIVDTSGRHKQEESLFEEMLQVSNA-VQPDNIIFVMDATIGQACEAQAKAFKER 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V+VG++I+TK+DGHAKGGGALSAVAAT+SPVIF+
Sbjct: 240 VNVGSIIITKLDGHAKGGGALSAVAATQSPVIFV-------------------------- 273
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G + I ++ P +P + KL L MG I +
Sbjct: 274 --GTGEHIDDLEPFKTKP-FISKL-----------------LGMGDIXXXXXXM------ 307
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMND--SRIMRIARGSGRQVREVM 417
A++K+ MT+MDSM + ELDS + KL + RI+R+ARGSG ++V
Sbjct: 308 -----------ARLKKLMTIMDSMNDSELDSRDGAKLFSKQPGRIVRVARGSGVTEKDVK 356
Query: 418 EMLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNA-------QHMSKVLPQGMLKQIG 469
+++ +Y + A + KM G+K + K G+M ++N+N Q M+K++ +L Q+G
Sbjct: 357 DLIAQYTKFAAVVKKMGGIKGLFKGGDM---TKNVNPAQMAKLNQQMAKMMDPRVLHQMG 413
Query: 470 GVGGLQNLMKQM-----GSTKDMMGMFGG 493
G+ GLQN+M+Q+ G ++MG FGG
Sbjct: 414 GMSGLQNMMRQLQQGAAGGLSNLMGGFGG 442
>gi|19075709|ref|NP_588209.1| signal recognition particle subunit Srp54 [Schizosaccharomyces
pombe 972h-]
gi|134887|sp|P21565.1|SRP54_SCHPO RecName: Full=Signal recognition particle 54 kDa protein homolog;
Short=SRP54
gi|5096|emb|CAA35951.1| signal recognition particle [Schizosaccharomyces pombe]
gi|173491|gb|AAA35344.1| signal recognition particle 54 kDa subunit [Schizosaccharomyces
pombe]
gi|4678686|emb|CAB41226.1| signal recognition particle subunit Srp54 [Schizosaccharomyces
pombe]
Length = 522
Score = 437 bits (1123), Expect = e-120, Method: Compositional matrix adjust.
Identities = 220/436 (50%), Positives = 320/436 (73%), Gaps = 5/436 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MV A LG ++ A+ S AT ++E++++ L I ALL+ DV +LV+E+++NIKK +
Sbjct: 1 MVFADLGRRLNSALGDFSKATSVNEELVDTLLKNICTALLETDVNVRLVQELRSNIKKKI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N+ L G N +RI+Q+A+F+ELC ++DP +FTPKKG+PSVIM VGLQGSGKTTTC+K
Sbjct: 61 NVSTLPQGINGKRIVQKAVFDELCSLVDPKVDAFTPKKGRPSVIMMVGLQGSGKTTTCSK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q++G K LV ADTFRAGAFDQLKQNA KA++P++GSYTE+DPV IA EGV+ FK
Sbjct: 121 LALHYQRRGLKSCLVAADTFRAGAFDQLKQNAIKARVPYFGSYTETDPVVIAKEGVDKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
+ D+IIVDTSGRH+QE LF EM ++S+A + PD I ++D+SIGQAA Q++AFK++
Sbjct: 181 NDRFDVIIVDTSGRHQQEQELFAEMVEISDA-IRPDQTIMILDASIGQAAESQSKAFKET 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
GAVI+TK+DGHAKGGGALSAVAATK+P++FIGTGEH+++ E F + F+S+LLG+GD
Sbjct: 240 ADFGAVIITKLDGHAKGGGALSAVAATKTPIVFIGTGEHINDLERFSPRSFISKLLGLGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G M+ + + D++ +++ L +G FT+R +Q NI+K+GP+ ++ SM+PG S+
Sbjct: 300 LEGLMEHVQS-LDFDKK-NMVKNLEQGKFTVRDFRDQLGNIMKLGPLSKMASMIPGMSN- 356
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEM 419
+M ++E ++KR + ++DSMT +ELDS + SR++R+ARGSG V EV E
Sbjct: 357 MMNGMNDEEGSLRMKRMLYIVDSMTEQELDSDGLLFVEQPSRVLRVARGSGTSVLEVEET 416
Query: 420 LEEYKRLAKIWSKMKG 435
+ + + A++ K+ G
Sbjct: 417 ISQVRVFAQMAKKIGG 432
>gi|70984902|ref|XP_747957.1| signal recognition particle protein SRP54 [Aspergillus fumigatus
Af293]
gi|66845585|gb|EAL85919.1| signal recognition particle protein SRP54 [Aspergillus fumigatus
Af293]
gi|159126118|gb|EDP51234.1| signal recognition particle protein SRP54 [Aspergillus fumigatus
A1163]
Length = 522
Score = 436 bits (1122), Expect = e-120, Method: Compositional matrix adjust.
Identities = 220/439 (50%), Positives = 304/439 (69%), Gaps = 4/439 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ ++ +DEK ++ L EI ALL ADV +LV+ ++ +IK V
Sbjct: 1 MVLQDLGRRINAAVNDLTRSSNLDEKAFDDMLKEICAALLSADVNVRLVQTLRKSIKSSV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N L NK+R+IQ+A+F+EL ++DP F PKKG+ +VIMFVGLQG+GKTTTCTK
Sbjct: 61 NFSSLPPAVNKKRLIQKAVFDELVALVDPHAEPFRPKKGRSNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G+K ALVCADTFRAGAFDQLKQNATKAKIP+YGS T++DP +A EGV FK
Sbjct: 121 LARHYQMRGFKTALVCADTFRAGAFDQLKQNATKAKIPYYGSLTQTDPAVVAAEGVAKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KE ++IIVDTSGRHKQE LF EM Q+ A V PD I V+DS+IGQAA Q+ AFK +
Sbjct: 181 KERFEVIIVDTSGRHKQEEELFTEMTQIQNA-VTPDQTILVLDSTIGQAAEAQSAAFKAT 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
+ GA+I+TK DGHA GGGA+SAVAAT +P+IF+GTGEH+ + E F+ K FV +LLGMGD
Sbjct: 240 ANFGAIIITKTDGHAAGGGAISAVAATHTPIIFLGTGEHLMDLERFEPKAFVQKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQP-ELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSS 359
+G ++ + V E + ++EG +TLR E +I+KMGP+ ++ M+PG S+
Sbjct: 300 MAGLVEHVQAVTKDSAAAKETYKHIAEGIYTLRDFRENITSIMKMGPLSKLSGMIPGLSN 359
Query: 360 ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVME 418
L +++ K++R + + DSMT ELDS + SR++RIA GSG VREV +
Sbjct: 360 -LTAGLDDEDGSLKLRRMVYIFDSMTAAELDSDGKIFVEQPSRMVRIACGSGTTVREVED 418
Query: 419 MLEEYKRLAKIWSKMKGLK 437
+L +++ +A + ++ G K
Sbjct: 419 LLSQHRMMAGMAKRVGGQK 437
>gi|299117528|emb|CBN75372.1| SRP54, GTPase subunit of the signal recognition particle (Partial)
[Ectocarpus siliculosus]
Length = 507
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 224/495 (45%), Positives = 332/495 (67%), Gaps = 21/495 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL +LG ++ A++++ T++D + + + +I RALL++DV ++V +++ N++
Sbjct: 1 MVLQELGSKLTSALRRLHTDTVVDRETVKAVVGDICRALLESDVNVQMVMKLRKNVE--A 58
Query: 61 NLDDLAA------------GHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVG 108
+ L A +RR IQ+A+ +EL MLDP + +KG+ +V+MFVG
Sbjct: 59 KAESLVAEQQDGGAGGGVGAAQQRRSIQKAVVDELTGMLDPKTAPYKMRKGRSNVVMFVG 118
Query: 109 LQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDP 168
LQG+GKTTT K+A+Y Q+KGWK A+VCADTFRAGAFDQLKQNATK + PFYGSY+E+DP
Sbjct: 119 LQGAGKTTTIAKFAHYWQRKGWKVAMVCADTFRAGAFDQLKQNATKLRCPFYGSYSEADP 178
Query: 169 VRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQ 228
VRIA EGV+ FK+E ++IIVDTSGRHKQE ALF+EM+++ EA V PD +MD++ GQ
Sbjct: 179 VRIADEGVQQFKQEKYEVIIVDTSGRHKQEDALFDEMKEIQEA-VQPDNTTLIMDATQGQ 237
Query: 229 AAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDV 288
A FDQA+AF ++V+VG+VI+TK+DGHAKGGGALSAVAAT SP+ F+G GEH D+ E FD
Sbjct: 238 AVFDQAKAFHEAVAVGSVIITKLDGHAKGGGALSAVAATNSPITFLGGGEHFDDLEAFDA 297
Query: 289 KPFVSRLLGMGDWSGFMDKIHEVVPMDQQP-ELLQKLS-EGNFTLRIMYEQFQNILKMGP 346
+ FVSRLLG GD G M +I E P E+++++S +G FTLR +Y+Q + +K+GP
Sbjct: 298 QSFVSRLLGFGDMKGLMRQIQESQEGSGDPKEMMERISNKGKFTLRDLYKQLSSAMKLGP 357
Query: 347 IGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIA 406
+ +V M+PG E+ +Q K+ + +MDSMT++ELD +SR++RIA
Sbjct: 358 MNKVMGMIPGM-GEMAQMANNSTTQGMFKKNLYIMDSMTDDELDGKVDLSQCESRLLRIA 416
Query: 407 RGSGRQVREVMEMLEEYKRLAKIWSKMKGLKIPKKGEMSALSRN--MNAQHMSKVLPQGM 464
RGSG +V +L+ +K K++ K+ + L RN + QH++++ P+ +
Sbjct: 417 RGSGTHPDQVRGLLKLHKHFEKVFGKVGKNMKGDASKAKQLQRNPALAKQHLNQMDPK-V 475
Query: 465 LKQIGGVGGLQNLMK 479
++ +GG + ++K
Sbjct: 476 VESLGGRAKVLEIIK 490
>gi|358371589|dbj|GAA88196.1| signal recognition particle 54K protein homolog (SrpA) [Aspergillus
kawachii IFO 4308]
Length = 534
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 218/439 (49%), Positives = 302/439 (68%), Gaps = 4/439 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ + +DEK ++ + EI ALL ADV +LV+ ++ +IK V
Sbjct: 1 MVLQDLGRRINAAVNDLTRSNNLDEKAFDDMIKEICAALLSADVNVRLVQSLRKSIKSSV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N L A NK+R+IQ+A+F+EL ++DP F PKKG+ +VIMFVGLQG+GKTTTCTK
Sbjct: 61 NFASLPAAVNKKRLIQKAVFDELVSLVDPHAEPFRPKKGRSNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G+K ALVCADTFRAGAFDQLKQNATKAKIP+YGS T++DP +A EGV FK
Sbjct: 121 LARHYQMRGFKTALVCADTFRAGAFDQLKQNATKAKIPYYGSLTQTDPAIVAAEGVAKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KE ++IIVDTSGRHKQE LF EM Q+ A V PD I V+DS+IGQAA Q+ AFK +
Sbjct: 181 KERFEIIIVDTSGRHKQEEELFTEMTQIQTA-VTPDQTILVLDSTIGQAAEAQSSAFKAT 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
GA+I+TK DGHA GGGA+SAVAAT +P+I++GTGEH+ + E F+ K F+ +LLGMGD
Sbjct: 240 ADFGAIIITKTDGHAAGGGAISAVAATHTPIIYLGTGEHLMDLERFEPKAFIQKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQP-ELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSS 359
+G ++ + V E + +SEG +TLR E +I+KMGP+ ++ M+PG S+
Sbjct: 300 MAGLVEHVQAVTKDSASAKETYKHISEGIYTLRDFRENITSIMKMGPLSKLSGMIPGLSN 359
Query: 360 ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVME 418
L +++ K++R + + DSMT ELD + SR++RIA GSG VREV +
Sbjct: 360 -LTAGLDDEDGSMKLRRMIYIFDSMTAAELDGDGKNFVEQPSRMVRIACGSGTTVREVED 418
Query: 419 MLEEYKRLAKIWSKMKGLK 437
+L +++ +A + ++ G K
Sbjct: 419 LLSQHRMMAGMAKRVGGQK 437
>gi|425773702|gb|EKV12037.1| Signal recognition particle protein SRP54 [Penicillium digitatum
Pd1]
gi|425776013|gb|EKV14252.1| Signal recognition particle protein SRP54 [Penicillium digitatum
PHI26]
Length = 523
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 220/440 (50%), Positives = 304/440 (69%), Gaps = 6/440 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ + +DEK ++ L EI ALL ADV +LV ++ +IK V
Sbjct: 1 MVLQDLGRRINSAVNDLTRSNNLDEKAFDDMLKEICAALLSADVNVRLVGTLRKSIKASV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N L A NK+R+IQ+ +F+EL K++DP SF PKKG+ +VIMFVGLQG+GKTTTCTK
Sbjct: 61 NFASLPAAVNKKRLIQKTVFDELVKLVDPRADSFRPKKGRSNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G+K ALVCADTFRAGAFDQLKQNATKAKIP++GS T++DP +A EGV FK
Sbjct: 121 LARHYQTRGFKTALVCADTFRAGAFDQLKQNATKAKIPYFGSLTQTDPAVVAAEGVAKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KE D+IIVDTSGRH+QE LF EM Q+ A V PD I V+DS+IGQ+A Q+ AFK +
Sbjct: 181 KERFDIIIVDTSGRHRQEEELFTEMTQIQTA-VTPDQTILVLDSTIGQSAEAQSAAFKAT 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
GA+I+TK DGHA GGGA+SAVAAT +P+IF+GTGEHM + E F+ + FV +LLGMGD
Sbjct: 240 ADFGAIIITKTDGHAAGGGAISAVAATHTPIIFLGTGEHMMDLERFEPRAFVQKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQ-QPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSS 359
+G ++ + + E + ++EG +TLR E +I+KMGP+ ++ M+PG S+
Sbjct: 300 VAGLVEHVQAMTKDSAGAKETYKHIAEGIYTLRDFRENITSIMKMGPLSKLSGMIPGLSN 359
Query: 360 ELMPKGREKESQA-KIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVM 417
M +G + E + K++R + + DSMT ELD + SR++RIA GSG VREV
Sbjct: 360 --MTQGLDDEDGSLKLRRMVYIFDSMTVAELDGDGKNFVEQPSRMVRIAHGSGTTVREVE 417
Query: 418 EMLEEYKRLAKIWSKMKGLK 437
++L +++ +A + ++ G K
Sbjct: 418 DVLSQHRMMAGMAKRVGGQK 437
>gi|115433004|ref|XP_001216639.1| signal recognition particle 54 kDa protein [Aspergillus terreus
NIH2624]
gi|114189491|gb|EAU31191.1| signal recognition particle 54 kDa protein [Aspergillus terreus
NIH2624]
Length = 526
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 219/439 (49%), Positives = 302/439 (68%), Gaps = 4/439 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ + +DEK ++ L EI ALL ADV +LV+ ++ +IK V
Sbjct: 1 MVLQDLGRRINAAVNDLTRSNNLDEKAFDDMLKEICAALLSADVNVRLVQSLRKSIKSSV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N L + NK+R+IQ+A+F+EL +++P F PKKG+ +VIMFVGLQG+GKTTTCTK
Sbjct: 61 NFASLPSAVNKKRLIQKAVFDELVALVNPHAEPFRPKKGRSNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G+K ALVCADTFRAGAFDQLKQNATKAKIP+YGS T++DP +A EGV FK
Sbjct: 121 LARHYQMRGFKTALVCADTFRAGAFDQLKQNATKAKIPYYGSLTQTDPAVVAAEGVAKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KE ++IIVDTSGRHKQE LF EM Q+ A V PD I V+DS+IGQAA Q+ AFK +
Sbjct: 181 KERFEIIIVDTSGRHKQEEELFTEMTQIQTA-VTPDQTILVLDSTIGQAAEAQSAAFKAT 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
GA+I+TK DGHA GGGA+SAVAAT +P+IF+GTGEHM + E F+ K F+ +LLGMGD
Sbjct: 240 ADFGAIIITKTDGHAAGGGAISAVAATHTPIIFLGTGEHMMDLERFEPKAFIQKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQP-ELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSS 359
+G ++ + V E + +SEG +TLR E +I+KMGP+ ++ M+PG S+
Sbjct: 300 MAGLVEHVQAVTKDSAAAKETYKHISEGIYTLRDFRENITSIMKMGPLSKLSGMIPGLSN 359
Query: 360 ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVME 418
L +++ K++R + + DSMT ELD + SR++RIA GSG VREV +
Sbjct: 360 -LTAGLDDEDGSMKLRRMIYIFDSMTASELDGDGKVFVEQPSRMVRIACGSGTTVREVED 418
Query: 419 MLEEYKRLAKIWSKMKGLK 437
+L +++ +A + ++ G K
Sbjct: 419 LLSQHRMMAGMAKRVGGQK 437
>gi|238503263|ref|XP_002382865.1| signal recognition particle protein SRP54 [Aspergillus flavus
NRRL3357]
gi|220691675|gb|EED48023.1| signal recognition particle protein SRP54 [Aspergillus flavus
NRRL3357]
Length = 527
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 219/439 (49%), Positives = 302/439 (68%), Gaps = 4/439 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ + +DEK ++ L EI ALL ADV +LV+ ++ +IK V
Sbjct: 1 MVLQDLGRRINAAVNDLTRSNNLDEKAFDDMLKEICAALLSADVNVRLVQSLRKSIKSSV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N L NK+R+IQ+A+F+EL +++P F PKKG+ +VIMFVGLQG+GKTTTCTK
Sbjct: 61 NFASLPPAVNKKRLIQKAVFDELVALVNPHADPFRPKKGRSNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G+K ALVCADTFRAGAFDQLKQNATKAKIP+YGS T++DP +A EGV FK
Sbjct: 121 LARHYQMRGFKTALVCADTFRAGAFDQLKQNATKAKIPYYGSLTQTDPAVVAAEGVAKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KE ++IIVDTSGRHKQE LF EM Q+ A V PD I V+DS+IGQAA Q+ AFK +
Sbjct: 181 KERFEIIIVDTSGRHKQEEELFTEMTQIQTA-VTPDQTILVLDSTIGQAAEAQSAAFKAT 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
GA+I+TK DGHA GGGA+SAVAAT +P+IF+GTGEHM + E F+ K F+ +LLGMGD
Sbjct: 240 ADFGAIIITKTDGHAAGGGAISAVAATHTPIIFLGTGEHMMDLERFEPKAFIQKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQP-ELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSS 359
+G ++ + V E + +SEG +T+R E +I+KMGP+ ++ M+PG S+
Sbjct: 300 MAGLVEHVQAVTKDSAAAKETYKHISEGIYTVRDFRENISSIMKMGPLSKLSGMIPGLSN 359
Query: 360 ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVME 418
L +++ K++R + + DSMT ELDS + SR++RIA GSG VREV +
Sbjct: 360 -LTAGLDDEDGSLKLRRMIYIFDSMTTAELDSDGKVFVEQPSRMVRIACGSGTTVREVED 418
Query: 419 MLEEYKRLAKIWSKMKGLK 437
+L +++ +A + ++ G K
Sbjct: 419 LLSQHRMMAGMAKRVGGQK 437
>gi|169776553|ref|XP_001822743.1| signal recognition particle protein [Aspergillus oryzae RIB40]
gi|83771478|dbj|BAE61610.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 527
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 219/439 (49%), Positives = 302/439 (68%), Gaps = 4/439 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ + +DEK ++ L EI ALL ADV +LV+ ++ +IK V
Sbjct: 1 MVLQDLGRRINAAVNDLTRSNNLDEKAFDDMLKEICAALLSADVNVRLVQSLRKSIKSSV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N L NK+R+IQ+A+F+EL +++P F PKKG+ +VIMFVGLQG+GKTTTCTK
Sbjct: 61 NFASLPPAVNKKRLIQKAVFDELVALVNPHADPFRPKKGRSNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G+K ALVCADTFRAGAFDQLKQNATKAKIP+YGS T++DP +A EGV FK
Sbjct: 121 LARHYQMRGFKTALVCADTFRAGAFDQLKQNATKAKIPYYGSLTQTDPAVVAAEGVAKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KE ++IIVDTSGRHKQE LF EM Q+ A V PD I V+DS+IGQAA Q+ AFK +
Sbjct: 181 KERFEIIIVDTSGRHKQEEELFTEMTQIQTA-VTPDQTILVLDSTIGQAAEAQSAAFKAT 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
GA+I+TK DGHA GGGA+SAVAAT +P+IF+GTGEHM + E F+ K F+ +LLGMGD
Sbjct: 240 ADFGAIIITKTDGHAAGGGAISAVAATHTPIIFLGTGEHMMDLERFEPKAFIQKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMD-QQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSS 359
+G ++ + V E + +SEG +T+R E +I+KMGP+ ++ M+PG S+
Sbjct: 300 MAGLVEHVQAVTKDSVAAKETYKHISEGIYTVRDFRENISSIMKMGPLSKLSGMIPGLSN 359
Query: 360 ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVME 418
L +++ K++R + + DSMT ELDS + SR++RIA GSG VREV +
Sbjct: 360 -LTAGLDDEDGSLKLRRMIYIFDSMTTAELDSDGKVFVEQPSRMVRIACGSGTTVREVED 418
Query: 419 MLEEYKRLAKIWSKMKGLK 437
+L +++ +A + ++ G K
Sbjct: 419 LLSQHRMMAGMAKRVGGQK 437
>gi|226739|prf||1604366A signal recognition particle 54kD protein
Length = 522
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 219/436 (50%), Positives = 319/436 (73%), Gaps = 5/436 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MV A LG ++ A+ S AT ++E++++ L I ALL+ DV +LV+E+++NIKK +
Sbjct: 1 MVFADLGRRLNSALGDFSKATSVNEELVDTLLKNICTALLETDVNVRLVQELRSNIKKKI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N+ L G N +RI+Q+A+F+ELC ++DP +FTPKKG+PSVIM VGLQGSGKTTTC+K
Sbjct: 61 NVSTLPQGINGKRIVQKAVFDELCSLVDPKVDAFTPKKGRPSVIMMVGLQGSGKTTTCSK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q++G K LV ADTFRAGAFDQLKQNA KA++P++GSYTE+DPV IA EGV+ FK
Sbjct: 121 LALHYQRRGLKSCLVAADTFRAGAFDQLKQNAIKARVPYFGSYTETDPVVIAKEGVDKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
+ D+IIVDTSGRH+QE LF EM ++S+A + PD I ++D+SIGQAA Q++AFK++
Sbjct: 181 NDRFDVIIVDTSGRHQQEQELFAEMVEISDA-IRPDQTIMILDASIGQAAESQSKAFKET 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
GAVI+TK+DGHAKGGGALSAVAATK+P++FIGTGEH+++ E F + F+S+LLG+GD
Sbjct: 240 ADFGAVIITKLDGHAKGGGALSAVAATKTPIVFIGTGEHINDLERFSPRSFISKLLGLGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G M+ + + D++ +++ L +G FT+R +Q NI+K+GP+ ++ SM+PG S+
Sbjct: 300 LEGLMEHVQS-LDFDKK-NMVKNLEQGKFTVRDFRDQLGNIMKLGPLSKMASMIPGMSN- 356
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEM 419
+M ++E ++KR + ++DSM +ELDS + SR++R+ARGSG V EV E
Sbjct: 357 MMNGMNDEEGSLRMKRMLYIVDSMIEQELDSDGLLFVEQPSRVLRVARGSGTSVLEVEET 416
Query: 420 LEEYKRLAKIWSKMKG 435
+ + + A++ K+ G
Sbjct: 417 ISQVRVFAQMAKKIGG 432
>gi|440463596|gb|ELQ33166.1| signal recognition particle 54 kDa protein [Magnaporthe oryzae Y34]
gi|440479190|gb|ELQ59973.1| signal recognition particle 54 kDa protein [Magnaporthe oryzae
P131]
Length = 491
Score = 433 bits (1114), Expect = e-119, Method: Compositional matrix adjust.
Identities = 215/406 (52%), Positives = 302/406 (74%), Gaps = 7/406 (1%)
Query: 32 LNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKMLDPGK 91
L EI ALL+ADV +LV +++ +IK VN +L NK+R+IQ+A+F+EL ++DP
Sbjct: 7 LKEICAALLEADVNVRLVGQLRKSIKSTVNFKELPPAVNKKRLIQKAVFDELVSLVDPHA 66
Query: 92 PSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQN 151
F PKKGK +VIMFVGLQG+GKTTTCTK A ++Q +G+K LVCADTFRAGAFDQLKQN
Sbjct: 67 EPFKPKKGKSNVIMFVGLQGAGKTTTCTKLARHYQSRGFKACLVCADTFRAGAFDQLKQN 126
Query: 152 ATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEA 211
ATKAKIP+YGS TE+DP +A EGV+ FKKE ++IIVDTSGRH+QE+ALF+EM + +A
Sbjct: 127 ATKAKIPYYGSLTETDPAVVAREGVDKFKKERFEVIIVDTSGRHRQESALFQEMMDIQKA 186
Query: 212 TVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPV 271
V PD I V+D+SIGQ A QA+AFK++ GA+I+TK DGHA GGGA+SAVAAT +P+
Sbjct: 187 -VKPDETIMVLDASIGQQAEAQAKAFKEAADFGAIIITKTDGHASGGGAISAVAATHTPI 245
Query: 272 IFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTL 331
+FIGTGEHM + E F + F+S+LLGMGD +G ++ + + +DQ+ + ++ ++EG FT+
Sbjct: 246 VFIGTGEHMLDLERFAPQQFISKLLGMGDMAGLVEHVQS-LKLDQK-DTIKHITEGIFTI 303
Query: 332 RIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDS 391
R + +Q QNI+KMGP+ ++ M+PG S+ +M ++E K+KR + + DSMT++ELD
Sbjct: 304 RDLRDQLQNIMKMGPLSKMAGMIPGMSN-MMQGMDDEEGTGKLKRMIYICDSMTDKELD- 361
Query: 392 SNPKLMND--SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKG 435
S+ K+ + +R+ R+ARGSG VREV ++L + + +A + KM G
Sbjct: 362 SDGKIFTEQPTRMTRVARGSGTHVREVEDLLTQQRMMAGMAKKMGG 407
>gi|317031653|ref|XP_001393946.2| signal recognition particle protein [Aspergillus niger CBS 513.88]
Length = 533
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 217/439 (49%), Positives = 301/439 (68%), Gaps = 4/439 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ + +DEK ++ + EI ALL ADV +LV+ ++ +IK V
Sbjct: 1 MVLQDLGRRINAAVNDLTRSNNLDEKAFDDMIKEICAALLSADVNVRLVQSLRKSIKSSV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N L NK+R+IQ+A+F+EL ++DP F PKKG+ +VIMFVGLQG+GKTTTCTK
Sbjct: 61 NFASLPPAVNKKRLIQKAVFDELVSLVDPHAEPFRPKKGRSNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G+K ALVCADTFRAGAFDQLKQNATKAKIP+YGS T++DP +A EGV FK
Sbjct: 121 LARHYQMRGFKTALVCADTFRAGAFDQLKQNATKAKIPYYGSLTQTDPAIVAAEGVAKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KE ++IIVDTSGRHKQE LF EM Q+ A V PD I V+DS+IGQAA Q+ AFK +
Sbjct: 181 KERFEIIIVDTSGRHKQEEELFTEMTQIQTA-VTPDQTILVLDSTIGQAAEAQSSAFKAT 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
GA+I+TK DGHA GGGA+SAVAAT +P+I++GTGEH+ + E F+ K F+ +LLGMGD
Sbjct: 240 ADFGAIIITKTDGHAAGGGAISAVAATHTPIIYLGTGEHLMDLERFEPKAFIQKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQP-ELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSS 359
+G ++ + V E + +SEG +TLR E +I+KMGP+ ++ M+PG S+
Sbjct: 300 MAGLVEHVQAVTKDSASAKETYKHISEGIYTLRDFRENITSIMKMGPLSKLSGMIPGLSN 359
Query: 360 ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVME 418
L +++ K++R + + DSMT ELD + SR++RIA GSG VREV +
Sbjct: 360 -LTAGLDDEDGSMKLRRMIYIFDSMTAAELDGDGKMFVEQPSRMVRIACGSGTTVREVED 418
Query: 419 MLEEYKRLAKIWSKMKGLK 437
+L +++ +A + ++ G K
Sbjct: 419 LLSQHRMMAGMAKRVGGQK 437
>gi|402077639|gb|EJT72988.1| signal recognition particle protein [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 514
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 212/411 (51%), Positives = 300/411 (72%), Gaps = 5/411 (1%)
Query: 26 KVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCK 85
+ + + EI ALL+ADV +LV +++ +IK VN +L NK+R+IQ+A+F+EL +
Sbjct: 17 QAFDAMIKEICSALLEADVNVRLVGQLRKSIKSTVNFKELPPAVNKKRLIQKAVFDELVR 76
Query: 86 MLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAF 145
++DP F PKKGK +VIMFVGLQG+GKTTTCTK A ++Q +G++ LVCADTFRAGAF
Sbjct: 77 LVDPHAEPFKPKKGKTNVIMFVGLQGAGKTTTCTKLARHYQTRGFRACLVCADTFRAGAF 136
Query: 146 DQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEM 205
DQLKQNATKAKIP+YGS TE+DP +A +GVE FKKE ++IIVDTSGRH+QE+ALF+EM
Sbjct: 137 DQLKQNATKAKIPYYGSLTETDPAVVARDGVEKFKKERFEVIIVDTSGRHRQESALFQEM 196
Query: 206 RQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVA 265
+ A V PD I V+D+SIGQ A QA+AFK++ GA+I+TK DGHA GGGA+SAVA
Sbjct: 197 MDIQTA-VKPDETIMVLDASIGQQAEAQAKAFKEAADFGAIIITKTDGHASGGGAISAVA 255
Query: 266 ATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLS 325
AT +P++FIGTGEHM + E F + F+S+LLGMGD +G ++ + + +DQ+ + ++ ++
Sbjct: 256 ATHTPIVFIGTGEHMLDLERFAPQQFISKLLGMGDMAGLVEHVQS-LKLDQK-DTIKHIT 313
Query: 326 EGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMT 385
EG FT+R + +Q QNI+KMGP+ ++ M+PG S+ +M + E K+KR + + DSMT
Sbjct: 314 EGIFTIRDLRDQLQNIMKMGPLSKMAGMIPGMSN-MMQGMDDDEGTNKLKRMIYICDSMT 372
Query: 386 NEELDSSNPKLMND-SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKG 435
++ELDS + +R+ R+ARGSG VREV ++L + + +A + KM G
Sbjct: 373 DKELDSDGKIFIEQPTRLTRVARGSGTHVREVEDLLTQQRMMAGMAKKMGG 423
>gi|336364891|gb|EGN93244.1| hypothetical protein SERLA73DRAFT_172158 [Serpula lacrymans var.
lacrymans S7.3]
Length = 566
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 232/517 (44%), Positives = 331/517 (64%), Gaps = 50/517 (9%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG ++ A +S AT++DEKVL+ L EIT ALL++DV KLV ++ +K V
Sbjct: 1 MVLADLGRKLNAAFSSLSRATVVDEKVLDATLKEITAALLESDVNVKLVASLRQKVKVKV 60
Query: 61 N--LD----DLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGK 114
LD D + N++ ++Q+A+F+EL ++DPG + PKKG+ +++M VGLQG+GK
Sbjct: 61 KAALDGGSSDKSKEANRKNLVQKAVFDELVHLVDPGVEPYKPKKGQCNILMAVGLQGNGK 120
Query: 115 TTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVE 174
TTTCTK A Y+QK+G+K +VCADTFRAGAFDQ +Q+ATKAK+ ++GSYTE+DPV IA +
Sbjct: 121 TTTCTKLAVYYQKRGFKSCIVCADTFRAGAFDQTRQSATKAKVAYFGSYTETDPVVIAAQ 180
Query: 175 GVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQA 234
GV FKKE ++IIVDTSGRHKQE+ LF EM Q+ EA V P + I ++D+SIGQAA Q+
Sbjct: 181 GVAKFKKERFEVIIVDTSGRHKQESELFREMVQIGEA-VKPHMTILILDASIGQAAEAQS 239
Query: 235 QAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSR 294
+AFK S GA+IVTKMDGHAKGGGA+SAVAATK+P+IF+G GEH+ + + F +PF+S+
Sbjct: 240 RAFKDSADFGAIIVTKMDGHAKGGGAISAVAATKTPIIFLGVGEHLHDLDRFSPQPFISK 299
Query: 295 LLGMGDWSGFMDKIHEVVPM--DQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFS 352
LLG+GD G M+ + ++ D+Q E+ +K G GPI ++ S
Sbjct: 300 LLGLGDMQGLMEHMQDLATQNPDKQKEMAKKTRRGETK------------HPGPISKIAS 347
Query: 353 MLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDS----------RI 402
M+PG EL+ G ++E ++KR + + DSMT+ ELDS M+ S R+
Sbjct: 348 MIPGLPQELL-SGSDEEGSLRMKRMIYITDSMTSTELDSDGAVFMDMSKDGKPVGLTWRV 406
Query: 403 MRIARGSGRQVREVMEMLEEYKRLAKI---------W----SKMKGLKIPKKGEMSALSR 449
R+A+GSG VREV E+L +Y+ +A + W KM+ + + + +
Sbjct: 407 TRVAKGSGTSVREVEELLCQYRMMANMAKQAGGKNGWLQAMQKMQSIAGGRGRGANGMPT 466
Query: 450 NMNAQHMSKVLPQGMLKQI-----GGVGGLQNLMKQM 481
Q M + +P G L+Q+ G GG+Q ++K M
Sbjct: 467 PAQIQAMQRAMPPGALQQMQRQLRSGGGGMQEMLKAM 503
>gi|254573270|ref|XP_002493744.1| Signal recognition particle (SRP) subunit (homolog of mammalian
SRP54) [Komagataella pastoris GS115]
gi|238033543|emb|CAY71565.1| Signal recognition particle (SRP) subunit (homolog of mammalian
SRP54) [Komagataella pastoris GS115]
gi|328354432|emb|CCA40829.1| Signal recognition particle subunit SRP54 [Komagataella pastoris
CBS 7435]
Length = 518
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 222/465 (47%), Positives = 327/465 (70%), Gaps = 9/465 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A+ ++ + ++D V++ L EI ALL++DV KLV +++ I+K +
Sbjct: 1 MVLADLGRRINNAVGNVTKSNVVDADVISNMLKEICNALLESDVNIKLVAQLREKIRKQI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPS-FTPKKGKPSVIMFVGLQGSGKTTTCT 119
+ +D G NK+++IQ+ +F+EL K++D + F PKK + +VIM VGLQG+GKTTTCT
Sbjct: 61 DAED-KPGINKKKLIQKVVFDELVKLVDCNEAELFKPKKKQTNVIMMVGLQGAGKTTTCT 119
Query: 120 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
K A Y+Q++G+K +VC DTFRAGAFDQLKQNATKAKIP+YGSYTE+DPV++ +GVE F
Sbjct: 120 KLAVYYQRRGFKVGMVCGDTFRAGAFDQLKQNATKAKIPYYGSYTETDPVKVTFDGVEEF 179
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQ 239
+KE ++IIVDTSGRH+QE LFEEM Q+ +A + P+ I V+D+SIGQ+A Q++AFK+
Sbjct: 180 RKEKFEIIIVDTSGRHRQEEDLFEEMVQIGKA-IKPNQTIMVLDASIGQSAESQSKAFKE 238
Query: 240 SVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMG 299
S GA+I+TKMD ++KGGGALSA+AAT +PV FI TGEH+ FE F + F+S+LLG+G
Sbjct: 239 SSDFGAIIITKMDSNSKGGGALSAIAATNTPVAFIATGEHIQNFEKFSGRGFISKLLGIG 298
Query: 300 DWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSS 359
D G M+ + + +D Q + ++ EG FTL+ Q NI+KMGP+ ++ MLPG
Sbjct: 299 DIEGLMEHVQS-MNLD-QGDTIKNFKEGKFTLQDFQTQLNNIMKMGPLSKLAQMLPGGMG 356
Query: 360 ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND--SRIMRIARGSGRQVREVM 417
+LM + E+E+ ++KR + +MDSMT +EL SS+ +L D SR++R+ARGSG V EV
Sbjct: 357 QLMGQVGEEEASKRLKRMIYIMDSMTKQEL-SSDGRLFIDQPSRMVRVARGSGTSVTEVE 415
Query: 418 EMLEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQ 462
+L + K +A++ + K + + G + ++ MN +M + + Q
Sbjct: 416 LVLLQQKMMARMALQSKNM-MSGAGGPAGMASKMNPANMRRAMQQ 459
>gi|156059506|ref|XP_001595676.1| hypothetical protein SS1G_03765 [Sclerotinia sclerotiorum 1980]
gi|154701552|gb|EDO01291.1| hypothetical protein SS1G_03765 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 528
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 220/426 (51%), Positives = 304/426 (71%), Gaps = 10/426 (2%)
Query: 12 RAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNK 71
R +Q SN +DEK + + EI ALL+ADV +LV ++ +IK VN +LA NK
Sbjct: 16 RILQGSSN---LDEKAFDGMIKEICSALLEADVNVRLVGNLRKSIKASVNFKELAPAVNK 72
Query: 72 RRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWK 131
+++IQ+A+++EL K++DP F PKKGK +VIMFVGLQG+GKTTTCTK A ++Q +G+K
Sbjct: 73 KKVIQKAVYDELVKLVDPHAEPFKPKKGKANVIMFVGLQGAGKTTTCTKLARWYQSRGFK 132
Query: 132 PALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDT 191
LVCADTFRAGAFDQLKQNATKAKIP+YGS T++DP +A EGV+ FKKE ++IIVDT
Sbjct: 133 ACLVCADTFRAGAFDQLKQNATKAKIPYYGSLTQTDPAVVAKEGVDKFKKEKFEIIIVDT 192
Query: 192 SGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKM 251
SGRH+QE ALF+EM + A V PD + V+D+SIGQ A Q++AFK++ GA+I+TK
Sbjct: 193 SGRHRQEDALFQEMVDIQTA-VKPDQTVMVLDASIGQQAEAQSKAFKETADFGAIIITKT 251
Query: 252 DGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEV 311
DGHA GGGA+SAVAAT +P++FIGTGEHM + E F FVS+LLGMGD G M+ +
Sbjct: 252 DGHASGGGAISAVAATHTPIVFIGTGEHMLDLEKFAPTQFVSKLLGMGDMQGLMEHVQS- 310
Query: 312 VPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQ 371
+ +DQ+ + ++ + EG FT+R + +Q NI+KMGP+ ++ M+PG S M +G + E
Sbjct: 311 LKLDQK-DTMKHIVEGIFTVRDLRDQLSNIMKMGPLSKMAGMIPGMGS--MMQGMDDEDG 367
Query: 372 A-KIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEMLEEYKRLAKI 429
A K+KR + + DSMT +ELDS ++ +R+ RIA GSG VRE+ ++L ++K +A +
Sbjct: 368 AMKLKRMIYICDSMTAKELDSDGKMFIDQPTRMTRIACGSGTSVREIEDLLTQHKMMAGM 427
Query: 430 WSKMKG 435
KM G
Sbjct: 428 AKKMGG 433
>gi|341882493|gb|EGT38428.1| hypothetical protein CAEBREN_28899 [Caenorhabditis brenneri]
gi|341898754|gb|EGT54689.1| hypothetical protein CAEBREN_29982 [Caenorhabditis brenneri]
Length = 376
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 219/379 (57%), Positives = 283/379 (74%), Gaps = 17/379 (4%)
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKK 181
AYY+Q+KGWK L+CADTFRAGAFDQLKQNATKA+IPFYGSY+E DPV+IA EGVE F K
Sbjct: 2 AYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYSEIDPVKIAAEGVEKFSK 61
Query: 182 ENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSV 241
E ++IIVDTSGRHKQEA+LFEEM QVS A V PD V+FVMD+SIGQA QA+AF Q+V
Sbjct: 62 EGFEIIIVDTSGRHKQEASLFEEMLQVSNA-VQPDNVVFVMDASIGQACEAQARAFSQTV 120
Query: 242 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 301
V +VI+TK+D HAKGGGALSAVA TKSPVIFIGTGEH+D+FEVF K FV +LLGMGD
Sbjct: 121 DVASVIITKLDSHAKGGGALSAVAVTKSPVIFIGTGEHIDDFEVFKPKSFVQKLLGMGDI 180
Query: 302 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 361
+G +D ++++ D + EL+ +L +G FTLR MYEQFQNI+KMGP Q+ SM+PGF E
Sbjct: 181 AGLVDMVNDIGIQDNK-ELVGRLKQGQFTLRDMYEQFQNIMKMGPFSQIMSMIPGFGPEF 239
Query: 362 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLM---NDSRIMRIARGSGRQVREVME 418
M KG E+ES ++KR MT+MDSM+++ELD + +R+ R+ARGSG +EV +
Sbjct: 240 MTKGNEQESVNRLKRMMTVMDSMSDKELDHPKASELFTKEPNRVARVARGSGSHQQEVRD 299
Query: 419 MLEEYKRLAKIWSK---MKGLKIPKKGEMSALSRNMNA-------QHMSKVLPQGMLKQI 468
+L +YK+ + + K +KGL K G+++ +NMN Q M+K++ +L+Q+
Sbjct: 300 LLAQYKKFSDVVKKIGSIKGLFNGKNGDIN--PKNMNPAKMMQLNQQMAKMMDPRVLQQM 357
Query: 469 GGVGGLQNLMKQMGSTKDM 487
GG+GGLQN+M+QM M
Sbjct: 358 GGMGGLQNMMQQMARAGKM 376
>gi|121718228|ref|XP_001276141.1| signal recognition particle protein SRP54 [Aspergillus clavatus
NRRL 1]
gi|119404339|gb|EAW14715.1| signal recognition particle protein SRP54 [Aspergillus clavatus
NRRL 1]
Length = 524
Score = 430 bits (1105), Expect = e-118, Method: Compositional matrix adjust.
Identities = 215/439 (48%), Positives = 301/439 (68%), Gaps = 4/439 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ + +DEK ++ + EI ALL ADV +LV+ ++ +IK V
Sbjct: 1 MVLQDLGRRINAAVNDLTRSNNLDEKAFDDMIKEICAALLSADVNVRLVQTLRKSIKSSV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N L NK+R+IQ+A+F+EL +++P F PKKG+ +VIMFVGLQG+GKTTTCTK
Sbjct: 61 NFSSLPPAVNKKRLIQKAVFDELVALVNPHAEPFRPKKGRSNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G+K ALVCADTFRAGAFDQLKQNATKAKIP+YGS T++DP +A EGV FK
Sbjct: 121 LARHYQTRGFKTALVCADTFRAGAFDQLKQNATKAKIPYYGSLTQTDPAVVAAEGVAKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KE ++IIVDTSGRHKQE LF EM Q+ A V PD I V+DS+IGQAA Q+ AFK +
Sbjct: 181 KERFEIIIVDTSGRHKQEEDLFTEMTQIQNA-VTPDQTILVLDSTIGQAAEAQSAAFKAT 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
GA+I+TK DGHA GGGA+SAVAAT +P+IF+GTGEH+ + E F+ K FV +LLGMGD
Sbjct: 240 ADFGAIIITKTDGHAAGGGAISAVAATHTPIIFLGTGEHLMDLERFEPKAFVQKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQP-ELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSS 359
+G ++ + V E + ++EG +T+R E +I+KMGP+ ++ M+PG S+
Sbjct: 300 MAGLVEHVQAVTKDSAAAKETYKHIAEGIYTVRDFRENITSIMKMGPLSKLSGMIPGLSN 359
Query: 360 ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVME 418
L +++ K++R + + DSMT ELD + SR++R+A GSG VREV +
Sbjct: 360 -LTAGLDDEDGSLKLRRMIYIFDSMTAAELDGDGKVFVEQPSRMVRVACGSGTTVREVED 418
Query: 419 MLEEYKRLAKIWSKMKGLK 437
+L +++ +A + ++ G K
Sbjct: 419 LLSQHRMMAGMAKRVGGQK 437
>gi|429861458|gb|ELA36147.1| signal recognition particle 54 kda protein [Colletotrichum
gloeosporioides Nara gc5]
Length = 501
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 212/405 (52%), Positives = 296/405 (73%), Gaps = 5/405 (1%)
Query: 32 LNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKMLDPGK 91
L EI ALL+ADV +LV +++ +IK VN DL NK+R+IQ+++F+EL K++DP
Sbjct: 2 LKEICAALLEADVNVRLVGQLRKSIKSTVNFKDLPPAVNKKRLIQKSVFDELVKLVDPHA 61
Query: 92 PSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQN 151
F PKKGK ++IMFVGLQG+GKTTTCTK A ++Q +G+K LVCADTFRAGAFDQLKQN
Sbjct: 62 EPFKPKKGKSNIIMFVGLQGAGKTTTCTKLARHYQARGFKACLVCADTFRAGAFDQLKQN 121
Query: 152 ATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEA 211
ATKAKIP+YGS TE+DP +A +GVE FKKE ++IIVDTSGRH+QE ALF+EM + A
Sbjct: 122 ATKAKIPYYGSLTETDPAVVARDGVEKFKKEKFEVIIVDTSGRHRQEEALFQEMVDIQTA 181
Query: 212 TVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPV 271
+ PD I V+D+SIGQ A QA+AFK++ GA+I+TK DGHA GGGA+SAVAAT +P+
Sbjct: 182 -IRPDETIMVLDASIGQQAESQAKAFKEAADFGAIIITKTDGHAHGGGAISAVAATHTPI 240
Query: 272 IFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTL 331
+FIGTGEHM + E F + FV +LLGMGD +G ++ + + + +DQ+ + ++ ++EG FT+
Sbjct: 241 VFIGTGEHMLDLERFAPQQFVQKLLGMGDMAGLVEHV-QSLKLDQK-DTIKHITEGIFTV 298
Query: 332 RIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDS 391
R + +Q NI+KMGP+ ++ M+PG S +M ++E AK+KR + + DSMT++ELDS
Sbjct: 299 RDLRDQLSNIMKMGPLSKMAGMIPGMSG-MMQGMDDEEGSAKLKRMIYICDSMTDKELDS 357
Query: 392 SNPKLMND-SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKG 435
+ +R+ R+A GSG VREV ++L + + +A + KM G
Sbjct: 358 DGKLFIEQPTRMTRVAHGSGTSVREVEDLLTQQRMMAGMAKKMGG 402
>gi|443926065|gb|ELU44808.1| signal recognition particle protein [Rhizoctonia solani AG-1 IA]
Length = 597
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 239/536 (44%), Positives = 334/536 (62%), Gaps = 59/536 (11%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG ++ A Q+ A ++D+KVL+ L ++ ALL++DV KLV ++ +K
Sbjct: 1 MVLADLGRKLNDAFAQLQRAPVVDDKVLDAILKDVCSALLESDVNVKLVASLRQKVKATA 60
Query: 61 NLD-----DLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKT 115
D N++ ++Q+A+F+EL +++DPG + P KGK +VIM VGLQG+GKT
Sbjct: 61 KAAFEGGADKGKEANRKGVVQKAVFDELVRLVDPGVEPYKPVKGKSNVIMAVGLQGNGKT 120
Query: 116 TTCTKY----AYYHQK--KGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPV 169
TTCTK H K P + DTFRAGAFDQ +Q+ATKAK+ ++GSYTE+DPV
Sbjct: 121 TTCTKARTPSHLTHSKLPHTHSPKNIACDTFRAGAFDQTRQSATKAKVAYFGSYTETDPV 180
Query: 170 RIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQA 229
IA +GV FKKE D+IIVDTSGRH+QEA LF+EM Q+ EA V PD+ + V+D+SIGQA
Sbjct: 181 AIASQGVAKFKKERFDVIIVDTSGRHRQEAELFQEMVQIGEA-VTPDMTVLVLDASIGQA 239
Query: 230 AFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVK 289
A Q++AFK+S + GA+IVTKMDGHAKGGGA+SAVAAT++P+IF+G GEH+ + + F +
Sbjct: 240 AEAQSRAFKESSNFGAIIVTKMDGHAKGGGAISAVAATQTPIIFLGVGEHLTDLDKFSPQ 299
Query: 290 PFVSRLLGMGDWSGFMDKIHEVV---PMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGP 346
PF+S++LGMGD G M+ I ++ P D+ E+ +KL EG ++R EQ N++ MGP
Sbjct: 300 PFISKMLGMGDMQGLMETIQDMAMSNP-DKHKEMAKKLEEGKLSIRDWREQISNVMSMGP 358
Query: 347 IGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMN-------- 398
I ++ SM+PG +EL+ +G ++E ++KR + + DSMT EELDS +
Sbjct: 359 ISKLASMIPGLPAELL-QGGDEEGSRRMKRMLFITDSMTAEELDSDGMIFLERGPDGTPT 417
Query: 399 --DSRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNA--- 453
R++R+ARGSG VREV E L +Y+ +A + G K G MSA+ + A
Sbjct: 418 GLSRRVLRVARGSGTNVREVEETLTQYRMMANMAKAAGG----KNGWMSAIQKMQQAAGP 473
Query: 454 -------------QHMSKVLPQGMLKQIGGVGGLQNL--MKQMGSTKDMM-GMFGG 493
M + LP GM LQNL M+Q G K+MM M GG
Sbjct: 474 PRGPNGMPTQQQIADMRRALPPGM---------LQNLQKMRQGGGIKEMMRSMMGG 520
>gi|397643867|gb|EJK76129.1| hypothetical protein THAOC_02125 [Thalassiosira oceanica]
Length = 635
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 209/442 (47%), Positives = 318/442 (71%), Gaps = 17/442 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNA---TIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIK 57
MVLA+LGG + ++ ++ I + L+ L +I AL ++DV+ +LV +++ NI+
Sbjct: 1 MVLAELGGKLRSSLHRLQGGRGDDAITTETLDAVLRDIGEALAESDVRAELVTDLKDNIR 60
Query: 58 K----IVNLDDLAAGHNKRRIIQQAIFNELCKMLDP-GKPSFTP---KKGKPSVIMFVGL 109
+ V+ + ++ N R +Q+A+ +EL ML P G+ S P ++G+P+VI+FVGL
Sbjct: 61 RKVGDAVSENTASSNANLARQVQRAVVDELTSMLTPSGEGSAKPYVMRRGRPNVILFVGL 120
Query: 110 QGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPV 169
QG+GKTT+ K+A+++ ++GWK A+VCADTFRAGAFDQLKQNATK ++PFYGSYTE+DPV
Sbjct: 121 QGAGKTTSIAKFAHHYLRRGWKTAMVCADTFRAGAFDQLKQNATKLRVPFYGSYTEADPV 180
Query: 170 RIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQA 229
IA EGV+ F ++ ++IIVDTSGRH+QE LFEEM+++S A VNP IFVMD++ GQA
Sbjct: 181 SIAEEGVDRFVQDGYEVIIVDTSGRHRQEEGLFEEMQEIS-AAVNPSNTIFVMDATQGQA 239
Query: 230 AFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVK 289
+DQA+AF +V+VG+VIVTK+DGHA+GGGA+SAVAAT SP++F+G+GE ++ E F+ +
Sbjct: 240 VYDQARAFHSAVNVGSVIVTKLDGHARGGGAISAVAATGSPIVFLGSGERFEDLEAFNAQ 299
Query: 290 PFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQ 349
FVS+LLG GD GFM++I + + E+++ +++G FTLR +Y+QFQ++ KMGP+ +
Sbjct: 300 SFVSKLLGFGDMRGFMEEIKSLNSGKDREEMMKNMAKGQFTLRDLYKQFQSVSKMGPLDR 359
Query: 350 VFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSS-NPKLMND----SRIMR 404
V M+PG L+PKG + E ++++++ +MDSM+++ELD + + ND RI R
Sbjct: 360 VMGMMPGMPEHLIPKGGDDERSKQLRKFLVIMDSMSDKELDGKIDLQKKNDPATEKRIRR 419
Query: 405 IARGSGRQVREVMEMLEEYKRL 426
IA GSG EV +L+++K++
Sbjct: 420 IAAGSGCHPMEVRALLQQHKQM 441
>gi|3334345|sp|Q00179.1|SRP54_ASPNG RecName: Full=Signal recognition particle 54 kDa protein homolog
gi|598061|gb|AAB04946.1| srpA [Aspergillus niger]
gi|134078502|emb|CAK40424.1| signal recognition particle 54K protein homolog srpA-Aspergillus
niger
gi|350640222|gb|EHA28575.1| hypothetical protein ASPNIDRAFT_56880 [Aspergillus niger ATCC 1015]
gi|1586559|prf||2204256A srpA gene
Length = 534
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 217/440 (49%), Positives = 301/440 (68%), Gaps = 5/440 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEK-VLNECLNEITRALLQADVQFKLVREMQTNIKKI 59
MVL LG I+ A+ ++ + +DEK ++ + EI ALL ADV +LV+ ++ +IK
Sbjct: 1 MVLQDLGRRINAAVNDLTRSNNLDEKQAFDDMIKEICAALLSADVNVRLVQSLRKSIKSS 60
Query: 60 VNLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCT 119
VN L NK+R+IQ+A+F+EL ++DP F PKKG+ +VIMFVGLQG+GKTTTCT
Sbjct: 61 VNFASLPPAVNKKRLIQKAVFDELVSLVDPHAEPFRPKKGRSNVIMFVGLQGAGKTTTCT 120
Query: 120 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
K A ++Q +G+K ALVCADTFRAGAFDQLKQNATKAKIP+YGS T++DP +A EGV F
Sbjct: 121 KLARHYQMRGFKTALVCADTFRAGAFDQLKQNATKAKIPYYGSLTQTDPAIVAAEGVAKF 180
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQ 239
KKE ++IIVDTSGRHKQE LF EM Q+ A V PD I V+DS+IGQAA Q+ AFK
Sbjct: 181 KKERFEIIIVDTSGRHKQEEELFTEMTQIQTA-VTPDQTILVLDSTIGQAAEAQSSAFKA 239
Query: 240 SVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMG 299
+ GA+I+TK DGHA GGGA+SAVAAT +P+I++GTGEH+ + E F+ K F+ +LLGMG
Sbjct: 240 TADFGAIIITKTDGHAAGGGAISAVAATHTPIIYLGTGEHLMDLERFEPKAFIQKLLGMG 299
Query: 300 DWSGFMDKIHEVVPMDQQP-ELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFS 358
D +G ++ + V E + +SEG +TLR E +I+KMGP+ ++ M+PG S
Sbjct: 300 DMAGLVEHVQAVTKDSASAKETYKHISEGIYTLRDFRENITSIMKMGPLSKLSGMIPGLS 359
Query: 359 SELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVM 417
+ L +++ K++R + + DSMT ELD + SR++RIA GSG VREV
Sbjct: 360 N-LTAGLDDEDGSMKLRRMIYIFDSMTAAELDGDGKMFVEQPSRMVRIACGSGTTVREVE 418
Query: 418 EMLEEYKRLAKIWSKMKGLK 437
++L +++ +A + ++ G K
Sbjct: 419 DLLSQHRMMAGMAKRVGGQK 438
>gi|67902518|ref|XP_681515.1| SR54_ASPNG SIGNAL RECOGNITION PARTICLE 54 KD PROTEIN HOMOLOG
[Aspergillus nidulans FGSC A4]
gi|40739794|gb|EAA58984.1| SR54_ASPNG SIGNAL RECOGNITION PARTICLE 54 KD PROTEIN HOMOLOG
[Aspergillus nidulans FGSC A4]
gi|259481033|tpe|CBF74199.1| TPA: hypothetical protein similar to srpA gene product (Broad)
[Aspergillus nidulans FGSC A4]
Length = 542
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 221/447 (49%), Positives = 306/447 (68%), Gaps = 13/447 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVL-------NECLNEITRALLQADVQFKLVREMQ 53
MVL LG I+ A+ ++ + +DEK+L E L EI ALL ADV +LV+ ++
Sbjct: 1 MVLQDLGRRINAAVNDLTRSPNLDEKMLILGVKAFEEMLKEICAALLSADVNVRLVQSLR 60
Query: 54 TNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSG 113
+IK VN L A NK+R+IQ+A+F+EL +++P F PKKG+ +VIMFVGLQG+G
Sbjct: 61 KSIKASVNFASLPAAVNKKRVIQKAVFDELVALVNPHAEPFRPKKGRSNVIMFVGLQGAG 120
Query: 114 KTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAV 173
KTTTCTK A ++Q +G+K ALVCADTFRAGAFDQLKQNATKAKIP+YGS T++DP +A
Sbjct: 121 KTTTCTKLARHYQMRGFKTALVCADTFRAGAFDQLKQNATKAKIPYYGSLTQTDPAVVAA 180
Query: 174 EGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQ 233
EGV FKKE ++IIVDTSGRHKQE LF EM Q+ A V PD I V+D +IGQAA Q
Sbjct: 181 EGVAKFKKERFEIIIVDTSGRHKQEEQLFTEMTQIQTA-VTPDQTILVLDGTIGQAAEVQ 239
Query: 234 AQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVS 293
+ AFK + GA+I+TK DGHA GGGA+SAVAAT +P+IF+GTGEHM + E F+ K F+
Sbjct: 240 SSAFKATADFGAIIITKTDGHAAGGGAISAVAATHTPIIFLGTGEHMMDLERFEPKAFIQ 299
Query: 294 RLLGMGDWSGFMDKIHEVVPMDQQP-ELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFS 352
+LLGMGD +G ++ + V E + ++EG +TLR E +I+KMGP+ ++
Sbjct: 300 KLLGMGDMAGLVEHVQAVTKDSAAAKETYKHIAEGIYTLRDFRENITSIMKMGPLSKLSG 359
Query: 353 MLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND--SRIMRIARGSG 410
M+PG S+ L +++ K++R + + DSM+ ELD S+ K+ + SR++RIA GSG
Sbjct: 360 MIPGLSN-LTAGLDDEDGSMKLRRMIYIFDSMSAVELD-SDGKIFDTQPSRMVRIAHGSG 417
Query: 411 RQVREVMEMLEEYKRLAKIWSKMKGLK 437
VREV ++L +++ +A + ++ G K
Sbjct: 418 TSVREVEDLLSQHRMMAGMAKRVGGQK 444
>gi|451854034|gb|EMD67327.1| hypothetical protein COCSADRAFT_83661 [Cochliobolus sativus ND90Pr]
Length = 543
Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust.
Identities = 224/436 (51%), Positives = 318/436 (72%), Gaps = 5/436 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ + +DEK + + EI+ AL++ADV KLV ++ +IK+ V
Sbjct: 1 MVLQDLGRRINAAVTDLTRSPNLDEKAFDSMVKEISNALVEADVNVKLVMNLRQSIKRAV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ LA G NK+R+IQ+A+F+EL KM+DP F P+KGK +VIMFVGLQG+GKTTTCTK
Sbjct: 61 DFKHLAPGVNKKRLIQKAVFDELVKMVDPHAEPFKPRKGKSNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G+K LVCADTFRAGAFDQLKQNATKAKIP+YGS+T++DPV +A EGVE FK
Sbjct: 121 LARWYQARGFKACLVCADTFRAGAFDQLKQNATKAKIPYYGSHTQTDPVVVAAEGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KE ++IIVDTSGRH+QE LF+EM Q+ A V PD I V+D +IGQAA QA+AFK++
Sbjct: 181 KERFEIIIVDTSGRHRQEKDLFDEMVQIQTA-VTPDQTIMVLDGTIGQAAESQARAFKEA 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
GA+++TK DG A GGGA+SAVAAT +P++F+G GEHM + E F + FVS+LLGMGD
Sbjct: 240 ADFGAIVITKTDGAAAGGGAISAVAATHTPIVFLGNGEHMLDLERFAPQAFVSKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G ++ + + +DQ+ + ++ +++G FT++ + +Q NI+KMGP+ ++ M+PG SS
Sbjct: 300 VQGLVEHVQS-LKLDQK-DTMKHITQGIFTIKDLRDQLSNIMKMGPLSKMAGMIPGLSS- 356
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEM 419
+M ++E AK+KR + + DSMT +EL+S ++ +R+ RIARGSG VREV E+
Sbjct: 357 MMGGMDDEEGGAKLKRMIYICDSMTEKELESDGKMFVDQPTRMTRIARGSGTSVREVEEL 416
Query: 420 LEEYKRLAKIWSKMKG 435
L +++ +A + KMKG
Sbjct: 417 LTQHRMMADMAKKMKG 432
>gi|451999951|gb|EMD92413.1| hypothetical protein COCHEDRAFT_1193900 [Cochliobolus
heterostrophus C5]
Length = 540
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 224/436 (51%), Positives = 318/436 (72%), Gaps = 5/436 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ + +DEK + + EI+ AL++ADV KLV ++ +IK+ V
Sbjct: 1 MVLQDLGRRINAAVTDLTRSPNLDEKAFDSMVKEISNALVEADVNVKLVMNLRQSIKRAV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ LA G NK+R+IQ+A+F+EL KM+DP F P+KGK +VIMFVGLQG+GKTTTCTK
Sbjct: 61 DFKHLAPGVNKKRLIQKAVFDELVKMVDPHAEPFKPRKGKSNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G+K LVCADTFRAGAFDQLKQNATKAKIP+YGS+T++DPV +A EGVE FK
Sbjct: 121 LARWYQARGFKACLVCADTFRAGAFDQLKQNATKAKIPYYGSHTQTDPVVVAAEGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KE ++IIVDTSGRH+QE LF+EM Q+ A V PD I V+D +IGQAA QA+AFK++
Sbjct: 181 KERFEIIIVDTSGRHRQEKDLFDEMVQIQTA-VTPDQTIMVLDGTIGQAAESQARAFKEA 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
GA+++TK DG A GGGA+SAVAAT +P++F+G GEHM + E F + FVS+LLGMGD
Sbjct: 240 ADFGAIVITKTDGAAAGGGAISAVAATHTPIVFLGNGEHMLDLERFAPQAFVSKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G ++ + + +DQ+ + ++ +++G FT++ + +Q NI+KMGP+ ++ M+PG SS
Sbjct: 300 VQGLVEHVQS-LKLDQK-DTMKHITQGIFTIKDLRDQLSNIMKMGPLSKMAGMIPGLSS- 356
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEM 419
+M ++E AK+KR + + DSMT +EL+S ++ +R+ RIARGSG VREV E+
Sbjct: 357 MMGGMDDEEGGAKLKRMIYICDSMTEKELESDGKMFVDQPTRMTRIARGSGTSVREVEEL 416
Query: 420 LEEYKRLAKIWSKMKG 435
L +++ +A + KMKG
Sbjct: 417 LTQHRMMAGMAKKMKG 432
>gi|440794394|gb|ELR15555.1| signal peptide binding domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 496
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 215/501 (42%), Positives = 323/501 (64%), Gaps = 28/501 (5%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L +LG I +A+ ++ AT++D+ +++ L +I L+ ADVQ KLV +M+ +++ +
Sbjct: 1 MALRELGTKIKQAVDMVARATLVDQDTVDDMLKQICNGLIAADVQVKLVVQMRQRMRERI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDP----GKPSFTPKKGKPSVIMFVGLQGSGKTT 116
+ G +K++II++ + +EL ++DP P F+P +G+ +V+MFVGLQG+GKTT
Sbjct: 61 QREFAIPGSSKQKIIRRVVLDELVALVDPQPGQANPKFSPARGRTNVVMFVGLQGAGKTT 120
Query: 117 TCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGV 176
T K A ++++GWK A+VCADTFRAGA QL Q A ++P Y T+ DPV +A EG+
Sbjct: 121 TVAKLALQYKRRGWKVAMVCADTFRAGADHQLLQLARAIQVPAYADGTQFDPVVVAREGI 180
Query: 177 ETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQA 236
+ FK+E ++I+VDTSGRHKQEA LFEEM Q++ A VNPD V++V+D +IGQAA+DQ A
Sbjct: 181 DCFKREGREIILVDTSGRHKQEAQLFEEMEQLA-AAVNPDTVMYVLDGTIGQAAYDQVLA 239
Query: 237 FKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLL 296
FKQ + +G++IVTK+DGHA+GGGALSAVAA P+ IGTGEH+D+ E FD + F+ ++L
Sbjct: 240 FKQRIRIGSIIVTKLDGHARGGGALSAVAAANCPITHIGTGEHVDDLESFDPRGFIQKML 299
Query: 297 GMGDWSGFMDKIHEVVPMDQQPE-------LLQKLSEGNFTLRIMYEQFQNILKMGPIGQ 349
GMG+ M+ + V D E + +L +G FTLR +YEQ ILKMGP+ +
Sbjct: 300 GMGNIPALMETMKNAVGADTSAEGKRDSALMANRLLQGGFTLRDLYEQMTTILKMGPLNK 359
Query: 350 VFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMN-----DSRIMR 404
V M+PG P E + K+K++M +MDSMT++ELD +P++ SR+ R
Sbjct: 360 VIEMIPGMDKLFQPNEEEGDPARKVKKFMIIMDSMTDDELD--DPEVWKKEKDVQSRVHR 417
Query: 405 IARGSGRQVREVMEMLEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGM 464
IARG+G V +V +L Y+ + +I + L + M+ ++P M
Sbjct: 418 IARGAGCAVTDVNALLANYRAITRIAPPRR---------GGGLRQGQGLGPMANLIPPAM 468
Query: 465 LKQIGGVGGLQNLMKQMGSTK 485
L+Q+GG+ GLQN+M+ MGS +
Sbjct: 469 LQQMGGLSGLQNMMRSMGSPQ 489
>gi|119498779|ref|XP_001266147.1| signal recognition particle protein SRP54 [Neosartorya fischeri
NRRL 181]
gi|119414311|gb|EAW24250.1| signal recognition particle protein SRP54 [Neosartorya fischeri
NRRL 181]
Length = 522
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 219/439 (49%), Positives = 303/439 (69%), Gaps = 4/439 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ ++ +DEK ++ L EI ALL ADV +LV+ ++ +IK V
Sbjct: 1 MVLQDLGRRINAAVNDLTRSSNLDEKAFDDMLKEICAALLSADVNVRLVQTLRKSIKSSV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ L NK+R+IQ+A+F+EL ++DP F PKKG+ +VIMFVGLQG+GKTTTCTK
Sbjct: 61 SFSSLPPAVNKKRLIQKAVFDELVALVDPHAEPFRPKKGRSNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G+K ALVCADTFRAGAFDQLKQNATKAKIP+YGS T++DP +A EGV FK
Sbjct: 121 LARHYQMRGFKTALVCADTFRAGAFDQLKQNATKAKIPYYGSLTQTDPAVVAAEGVAKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KE ++IIVDTSGRHKQE LF EM Q+ A V PD I V+DS+IGQAA Q+ AFK +
Sbjct: 181 KERFEVIIVDTSGRHKQEEELFTEMTQIQNA-VTPDQTILVLDSTIGQAAEAQSAAFKAT 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
GA+I+TK DGHA GGGA+SAVAAT +P+IF+GTGEH+ + E F+ K FV +LLGMGD
Sbjct: 240 ADFGAIIITKTDGHAAGGGAISAVAATHTPIIFLGTGEHLMDLERFEPKAFVQKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQP-ELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSS 359
+G ++ + V E + ++EG +TLR E +I+KMGP+ ++ M+PG S+
Sbjct: 300 MAGLVEHVQAVTKDSAAAKETYKHIAEGIYTLRDFRENITSIMKMGPLSKLSGMIPGLSN 359
Query: 360 ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVME 418
L +++ K++R + + DSMT ELDS + SR++RIA GSG VREV +
Sbjct: 360 -LTAGLDDEDGSLKLRRMVYIFDSMTAAELDSDGKIFVEQPSRMVRIACGSGTTVREVED 418
Query: 419 MLEEYKRLAKIWSKMKGLK 437
+L +++ +A + ++ G K
Sbjct: 419 LLSQHRMMAGMAKRVGGQK 437
>gi|50555115|ref|XP_504966.1| YALI0F03839p [Yarrowia lipolytica]
gi|54042305|sp|Q99150.2|SRP54_YARLI RecName: Full=Signal recognition particle 54 kDa protein homolog;
Short=SRP54
gi|49650836|emb|CAG77773.1| YALI0F03839p [Yarrowia lipolytica CLIB122]
Length = 536
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 230/461 (49%), Positives = 313/461 (67%), Gaps = 20/461 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A +S IDE L+ L E+ ALL++DV KLV +++ +K V
Sbjct: 1 MVLEDLGKRINGAFANLSKGGDIDE-ALDAMLKEVCSALLESDVNIKLVSQLRQKVKNSV 59
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKML--DPGKPS---FTPKKGKPSVIMFVGLQGSGKT 115
G +K+++IQ+A+F+EL ++ D S F P+KGK +V+MFVGLQGSGKT
Sbjct: 60 KA--TPNGASKKKVIQKALFDELVNLVGVDESAASAAKFKPQKGKSNVVMFVGLQGSGKT 117
Query: 116 TTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEG 175
T+CTK A Y+Q++G+K LVCADTFRAGAFDQLKQNATKAKIPF+GSYTE+DPV +A EG
Sbjct: 118 TSCTKLAVYYQRRGFKVGLVCADTFRAGAFDQLKQNATKAKIPFFGSYTETDPVAVAAEG 177
Query: 176 VETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQ 235
V FKKE ++IIVDTSGRH+QE+ LF EM + A V PD I V+D+SIGQAA Q++
Sbjct: 178 VAKFKKEKFEIIIVDTSGRHRQESELFTEMVDIG-AAVKPDSTIMVLDASIGQAAEPQSR 236
Query: 236 AFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRL 295
AFK + G++I+TKMDGHAKGGGA+SAVAAT +P+IFIGTGEH+ + E F K F+S+L
Sbjct: 237 AFKDASDFGSIILTKMDGHAKGGGAISAVAATNTPIIFIGTGEHIHDLEAFSPKQFISKL 296
Query: 296 LGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLP 355
LG+GD G M+ + + +DQ+ + ++ + EG FTL + +Q N+LKMG + + M+P
Sbjct: 297 LGIGDLQGLMETMQS-LNLDQK-KTMEHIQEGIFTLADLRDQMGNMLKMGSLSSIAGMIP 354
Query: 356 GFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMN-DSRIMRIARGSGRQVR 414
G S + ++E +IKR + ++DSM +ELDS SRI R+ARGSG +R
Sbjct: 355 GLSG-MASSISDEEGTRRIKRMIYILDSMNQKELDSDGSIFKEVPSRITRVARGSGTSIR 413
Query: 415 EVMEMLEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQH 455
EV E+L++ K +A + S+M G K G M SR NAQ+
Sbjct: 414 EVEEVLQQQKMMASMASRMGG----KNGMM---SRMQNAQN 447
>gi|261202392|ref|XP_002628410.1| signal recognition particle protein SRP54 [Ajellomyces dermatitidis
SLH14081]
gi|239590507|gb|EEQ73088.1| signal recognition particle protein SRP54 [Ajellomyces dermatitidis
SLH14081]
Length = 530
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 214/440 (48%), Positives = 297/440 (67%), Gaps = 6/440 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ + +DE+ + + EI ALL ADV +LV+ ++ +IK V
Sbjct: 1 MVLQDLGRRINAAVNDLTRSNNLDEQAFDAMIKEICAALLSADVNVRLVQSLRKSIKAAV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
L NK+R+IQ+ +F++L ++DP F PKKG+ +VIMFVGLQG+GKTTTCTK
Sbjct: 61 PFSSLPPAVNKKRLIQKTVFDQLVALVDPHAEPFKPKKGRSNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G++ ALVCADTFRAGAFDQLKQNATKAKIP++GS T++DP +A EGV FK
Sbjct: 121 LARHYQTRGFRAALVCADTFRAGAFDQLKQNATKAKIPYFGSLTQTDPAVVAAEGVAKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KE D+IIVDTSGRHKQE LF EM Q+ A + PD I V+D +IGQAA Q+ AFK +
Sbjct: 181 KERFDIIIVDTSGRHKQEEDLFTEMTQIQTA-IKPDQTILVLDGTIGQAAESQSAAFKAT 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
GA+I+TK DG A GGGA+SAVAAT +P+IF+GTGEHM + E F KPF+ +LLGMGD
Sbjct: 240 ADFGAIIITKTDGSAAGGGAISAVAATHTPIIFLGTGEHMLDLERFAPKPFIQKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQP-ELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSS 359
+ ++ + V E + +S G FTLR E +I+KMGP+ ++ SM+PG S+
Sbjct: 300 MASLVEHVQAVTKDSATAKETYKHISAGIFTLRDFRENITSIMKMGPLSKISSMIPGLSN 359
Query: 360 ELMPKGREKESQA-KIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVM 417
+ G + E + K++R + + DSMT ELD ++ SRI+R+A GSG VREV
Sbjct: 360 --ITSGLDDEDGSLKLRRMIYIFDSMTAAELDGDGKVFIDQPSRIVRVACGSGTTVREVE 417
Query: 418 EMLEEYKRLAKIWSKMKGLK 437
++L ++K +A + ++ G K
Sbjct: 418 DLLSQHKMMAGMAKRVGGQK 437
>gi|363751038|ref|XP_003645736.1| hypothetical protein Ecym_3433 [Eremothecium cymbalariae
DBVPG#7215]
gi|356889370|gb|AET38919.1| Hypothetical protein Ecym_3433 [Eremothecium cymbalariae
DBVPG#7215]
Length = 536
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 217/435 (49%), Positives = 302/435 (69%), Gaps = 8/435 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNEC-LNEITRALLQADVQFKLVREMQTNIK-- 57
MVLA LG I+ A+ Q N + V E L I ALL+ DV KLV ++ N+K
Sbjct: 1 MVLADLGKRINAAVTQALNNDKDEYAVTVELMLKSIATALLENDVNIKLVSNLRNNLKVK 60
Query: 58 --KIVNLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKT 115
+ N + + +++IQ+ +F ELC ++D ++ PKK K +VIMFVGLQGSGKT
Sbjct: 61 LLGVKNSNKDTSQAQTKKLIQKTVFEELCSLVDCETAAYQPKKKKSNVIMFVGLQGSGKT 120
Query: 116 TTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEG 175
T+CTK A Y+ K+G+K LVCADTFRAGAFDQLKQNA KAKIPFYGSYTE++PV++A +G
Sbjct: 121 TSCTKLAVYYSKRGFKVGLVCADTFRAGAFDQLKQNAIKAKIPFYGSYTETNPVKVAADG 180
Query: 176 VETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQ 235
VE FKKE ++IIVDTSGRH QE ALF+EM ++SE V P+ I V+D+SIGQAA Q++
Sbjct: 181 VEKFKKEKFEIIIVDTSGRHHQEDALFQEMVEISEV-VKPNSTIMVLDASIGQAAEQQSR 239
Query: 236 AFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRL 295
AFK+S GA+++TKMDGHAKGGGA+SAVAATK+P+IFIGTGEH+ +FE F K F+S+L
Sbjct: 240 AFKESSDFGAIVLTKMDGHAKGGGAISAVAATKTPIIFIGTGEHIHDFEKFSPKSFISKL 299
Query: 296 LGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLP 355
LG+GD +++ V + ++ + +G FTL +Q Q I+KMGP+ + SM+P
Sbjct: 300 LGIGDIESLLEQFKTVSNKEDTKATMENIQQGKFTLLDFQKQMQTIMKMGPLSNIASMIP 359
Query: 356 GFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVR 414
G + +M E+E+ K+K+ + ++DSMT EEL+S L++ SR++R+ARGSG V
Sbjct: 360 GLGN-MMNSVTEEETSKKMKKMVYVLDSMTKEELESDGRILIDQPSRLIRVARGSGTSVF 418
Query: 415 EVMEMLEEYKRLAKI 429
EV +L + + +A++
Sbjct: 419 EVEMILMQQQMMARM 433
>gi|302408571|ref|XP_003002120.1| signal recognition particle 54 kDa protein [Verticillium albo-atrum
VaMs.102]
gi|261359041|gb|EEY21469.1| signal recognition particle 54 kDa protein [Verticillium albo-atrum
VaMs.102]
Length = 518
Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust.
Identities = 216/436 (49%), Positives = 303/436 (69%), Gaps = 13/436 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ A +DEK + ++DV +LV +++ +IK V
Sbjct: 1 MVLQDLGRRINTAVSDLTRAPNLDEKR--------SAPPPRSDVNVRLVGQLRKSIKSTV 52
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N DL NK+R+IQ+ +F+EL K++DP F PKKGK +VIMFVGLQG+GKTTTCTK
Sbjct: 53 NFKDLPPAVNKKRLIQKTVFDELVKLVDPHAEPFKPKKGKANVIMFVGLQGAGKTTTCTK 112
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G K LVCADTFRAGAFDQLKQNATKAKIP+YGS TE+DP +A EGV+ FK
Sbjct: 113 LARHYQARGLKACLVCADTFRAGAFDQLKQNATKAKIPYYGSLTETDPAVVAREGVDKFK 172
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KE ++IIVDTSGRH+QE LF+EM + +A + PD I V+D+SIGQ A QA+AFK++
Sbjct: 173 KERFEVIIVDTSGRHRQEENLFQEMVDI-QAAIKPDETIMVLDASIGQQAESQAKAFKEA 231
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
GA+I+TK DGHA GGGA+SAVAAT +P++FIGTGEHM +FE F + FV +LLGMGD
Sbjct: 232 ADFGAIIITKTDGHAHGGGAISAVAATHTPIVFIGTGEHMLDFERFAPQQFVQKLLGMGD 291
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
+ ++ + + +DQ+ + ++ ++EG FT+R + +Q NI+KMGP+ ++ M+PG S
Sbjct: 292 MASLVEHVQSL-KLDQK-DTMKHITEGIFTVRDLRDQLSNIMKMGPLSKMAGMIPGMSG- 348
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEM 419
+M ++E K+KR + + DSMT++ELDS +R+ R+ARGSG VREV ++
Sbjct: 349 MMQGMDDEEGSLKLKRMIYICDSMTDKELDSDGKMFTEQPTRMTRVARGSGTSVREVEDL 408
Query: 420 LEEYKRLAKIWSKMKG 435
L + + +A + KM G
Sbjct: 409 LTQQRMMAGMAKKMGG 424
>gi|239612234|gb|EEQ89221.1| signal recognition particle protein SRP54 [Ajellomyces dermatitidis
ER-3]
gi|327353181|gb|EGE82038.1| signal recognition particle protein [Ajellomyces dermatitidis ATCC
18188]
Length = 533
Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust.
Identities = 214/440 (48%), Positives = 297/440 (67%), Gaps = 6/440 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ + +DE+ + + EI ALL ADV +LV+ ++ +IK V
Sbjct: 1 MVLQDLGRRINAAVNDLTRSNNLDEQAFDAMIKEICAALLSADVNVRLVQSLRKSIKAAV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
L NK+R+IQ+ +F++L ++DP F PKKG+ +VIMFVGLQG+GKTTTCTK
Sbjct: 61 PFSSLPPAVNKKRLIQKTVFDQLVALVDPHAEPFKPKKGRSNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G++ ALVCADTFRAGAFDQLKQNATKAKIP++GS T++DP +A EGV FK
Sbjct: 121 LARHYQTRGFRAALVCADTFRAGAFDQLKQNATKAKIPYFGSLTQTDPAVVAAEGVAKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KE D+IIVDTSGRHKQE LF EM Q+ A + PD I V+D +IGQAA Q+ AFK +
Sbjct: 181 KERFDIIIVDTSGRHKQEEDLFTEMTQIQTA-IKPDQTILVLDGTIGQAAESQSAAFKAT 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
GA+I+TK DG A GGGA+SAVAAT +P+IF+GTGEHM + E F KPF+ +LLGMGD
Sbjct: 240 ADFGAIIITKTDGSAAGGGAISAVAATHTPIIFLGTGEHMLDLERFAPKPFIQKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQP-ELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSS 359
+ ++ + V E + +S G FTLR E +I+KMGP+ ++ SM+PG S+
Sbjct: 300 MASLVEHVQAVTKDSATAKETYKHISAGIFTLRDFRENITSIMKMGPLSKISSMIPGLSN 359
Query: 360 ELMPKGREKESQA-KIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVM 417
+ G + E + K++R + + DSMT ELD ++ SRI+R+A GSG VREV
Sbjct: 360 --ITSGLDDEDGSLKLRRMIYIFDSMTAAELDGDGKVFIDQPSRIVRVACGSGTTVREVE 417
Query: 418 EMLEEYKRLAKIWSKMKGLK 437
++L ++K +A + ++ G K
Sbjct: 418 DLLSQHKMMAGMAKRVGGQK 437
>gi|384498168|gb|EIE88659.1| signal recognition particle 54 kDa subunit [Rhizopus delemar RA
99-880]
Length = 745
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 212/451 (47%), Positives = 303/451 (67%), Gaps = 44/451 (9%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A+ ++ A +IDEKVL+ + +I ALL +DV LV++++TNIKK V
Sbjct: 253 MVLADLGRKINSALSDLTKAPVIDEKVLDSLVKQICAALLASDVNVMLVQKLRTNIKKSV 312
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NL++LA NK+R+I++A+ +EL +++DP + P K + ++ M VGLQG+GKTTTCTK
Sbjct: 313 NLEELANSANKKRLIEKAVMDELSRLVDPEVEPYKPVKRRTNIFMMVGLQGAGKTTTCTK 372
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q+KGWK ALVCADTFRAGAFDQLKQNATKAKIP+YGSYTE+DPV IAVEGVE F+
Sbjct: 373 IASFYQRKGWKVALVCADTFRAGAFDQLKQNATKAKIPYYGSYTETDPVTIAVEGVEKFR 432
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
E ++IIVDTSGRHKQE LFEEM+Q+S ++V PD IFVMD +IGQAA QA+AFK++
Sbjct: 433 AEKFEIIIVDTSGRHKQETELFEEMKQIS-SSVKPDTTIFVMDGTIGQAAESQAKAFKEA 491
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
G++I+TKMDGHAKGGGA+SAVAAT SP+IF+G GEH+ + + F+ K F+ ++LG+ D
Sbjct: 492 AGFGSIIITKMDGHAKGGGAISAVAATHSPIIFLGVGEHLQDMDRFEPKSFIRKVLGVQD 551
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
++ + + + ++ +L++ + + +PG +E
Sbjct: 552 MRDVIEHVQDSINLNDNKKLIKNIEKA--------------------------IPGMPAE 585
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNE----------------ELDSSNPKLMNDSRIMR 404
++ G E+E ++KR M +MDSMT+E ELD + R++R
Sbjct: 586 ML-AGAEQEGGKRMKRMMCIMDSMTDEGNKDVDNPLKLNPLTIELDGDDKPFKEMKRVIR 644
Query: 405 IARGSGRQVREVMEMLEEYKRLAKIWSKMKG 435
+ARGSG V EV E++ +Y + A++ + G
Sbjct: 645 VARGSGTTVCEVQEIIFQYTKFAEMVKSIGG 675
>gi|169624365|ref|XP_001805588.1| hypothetical protein SNOG_15441 [Phaeosphaeria nodorum SN15]
gi|160705155|gb|EAT77106.2| hypothetical protein SNOG_15441 [Phaeosphaeria nodorum SN15]
Length = 533
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 223/436 (51%), Positives = 316/436 (72%), Gaps = 5/436 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ + +DEK + EI+ AL++ADV KLV ++ +IK+ V
Sbjct: 1 MVLQDLGRRINAAVNDLTRSPNLDEKAFEAMVKEISNALVEADVNVKLVMNLRQSIKRSV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ LA NK+R+IQ+A+F+EL K++DP F PKKGK +VIMFVGLQGSGKTTTCTK
Sbjct: 61 DFKHLAPNVNKKRVIQKAVFDELVKLVDPHAEPFKPKKGKSNVIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G+K LVCADTFRAGAFDQLKQNATKAKIP++GS+T++DPV +A EGVE FK
Sbjct: 121 LARWYQARGFKACLVCADTFRAGAFDQLKQNATKAKIPYFGSHTQTDPVIVAAEGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KE ++IIVDTSGRH+QE LF+EM Q+ A V PD I V+D++IGQAA QA+AFK +
Sbjct: 181 KERFEIIIVDTSGRHRQEKDLFDEMVQIQNA-VQPDQTIMVLDATIGQAAEGQARAFKDA 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
GA+++TK DG A GGGA+SAVAAT +P++FIG GEHM + E F +PFVS+LLGMGD
Sbjct: 240 ADFGAIVITKTDGAAAGGGAISAVAATHTPIVFIGNGEHMLDLERFSPEPFVSKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G ++ + + +DQ+ + ++ +++G FT++ + +Q NI+KMGP+ ++ M+PG +
Sbjct: 300 VQGLVEHVQS-LKLDQK-DTMKHITQGIFTIKDLRDQLSNIMKMGPLSKMAGMIPGLGN- 356
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEM 419
+M ++E AK+KR + + DSMT +EL+S ++ +R+ RIARGSG VREV E+
Sbjct: 357 MMGGMDDEEGGAKLKRMIYICDSMTEKELESDGKMFVDQPTRMTRIARGSGTSVREVEEL 416
Query: 420 LEEYKRLAKIWSKMKG 435
L +++ +A + KMKG
Sbjct: 417 LTQHRMMAGMAKKMKG 432
>gi|240277685|gb|EER41193.1| signal recognition particle protein [Ajellomyces capsulatus H143]
gi|325093770|gb|EGC47080.1| signal recognition particle protein SRP54 [Ajellomyces capsulatus
H88]
Length = 527
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 213/440 (48%), Positives = 297/440 (67%), Gaps = 6/440 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ + +D + + + EI ALL ADV +LV+ ++ +IK V
Sbjct: 1 MVLQDLGRRINAAVNDLTRSNNVDAQAFDAMIKEICAALLSADVNVRLVQSLRKSIKAAV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
L NK+R+IQ+ +F++L ++DP F PKKG+ +VIMFVGLQG+GKTTTCTK
Sbjct: 61 PFSSLPPAVNKKRLIQKTVFDQLVALVDPHAEPFKPKKGRSNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G++ ALVCADTFRAGAFDQLKQNATKAKIP++GS T++DP +A EGV FK
Sbjct: 121 LARHYQTRGFRAALVCADTFRAGAFDQLKQNATKAKIPYFGSLTQTDPAVVAAEGVAKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KE D+IIVDTSGRHKQE LF EM Q+ A + PD I V+D +IGQAA Q+ AFK +
Sbjct: 181 KERFDIIIVDTSGRHKQEEDLFVEMTQIQTA-IKPDQTILVLDGTIGQAAESQSAAFKAA 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
GA+I+TK DG+A GGGA+SAVAAT +P+IF+GTGEHM + E F KPF+ +LLGMGD
Sbjct: 240 ADFGAIIITKTDGNAAGGGAISAVAATHTPIIFLGTGEHMLDLERFSPKPFIQKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQP-ELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSS 359
+ ++ + V E + +S G FTLR E +I+KMGP+ ++ SM+PG S+
Sbjct: 300 MASLVEHVQAVTKDSATAKETYKHISAGIFTLRDFRENITSIMKMGPLSKISSMIPGLSN 359
Query: 360 ELMPKGREKESQA-KIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVM 417
+ G + E + K++R + + DSMT ELD ++ SRI+R+A GSG VREV
Sbjct: 360 --ITSGLDDEDGSLKLRRMIYIFDSMTATELDGDGKVFVDQPSRIVRVACGSGTTVREVE 417
Query: 418 EMLEEYKRLAKIWSKMKGLK 437
++L ++K +A + ++ G K
Sbjct: 418 DLLSQHKMMAGMAKRVGGQK 437
>gi|225557139|gb|EEH05426.1| signal recognition particle protein SRP54 [Ajellomyces capsulatus
G186AR]
Length = 527
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 213/440 (48%), Positives = 297/440 (67%), Gaps = 6/440 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ + +D + + + EI ALL ADV +LV+ ++ +IK V
Sbjct: 1 MVLQDLGRRINAAVNDLTRSNNVDAQAFDAMIKEICAALLSADVNVRLVQSLRKSIKAAV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
L NK+R+IQ+ +F++L ++DP F PKKG+ +VIMFVGLQG+GKTTTCTK
Sbjct: 61 PFSSLPPAVNKKRLIQKTVFDQLVALVDPHAEPFKPKKGRSNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G++ ALVCADTFRAGAFDQLKQNATKAKIP++GS T++DP +A EGV FK
Sbjct: 121 LARHYQTRGFRAALVCADTFRAGAFDQLKQNATKAKIPYFGSLTQTDPAVVAAEGVAKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KE D+IIVDTSGRHKQE LF EM Q+ A + PD I V+D +IGQAA Q+ AFK +
Sbjct: 181 KERFDIIIVDTSGRHKQEEDLFVEMTQIQTA-IKPDQTILVLDGTIGQAAESQSAAFKAA 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
GA+I+TK DG+A GGGA+SAVAAT +P+IF+GTGEHM + E F KPF+ +LLGMGD
Sbjct: 240 ADFGAIIITKTDGNAAGGGAISAVAATHTPIIFLGTGEHMLDLERFSPKPFIQKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQP-ELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSS 359
+ ++ + V E + +S G FTLR E +I+KMGP+ ++ SM+PG S+
Sbjct: 300 MASLVEHVQAVTKDSATAKETYKHISAGIFTLRDFRENITSIMKMGPLSKISSMIPGLSN 359
Query: 360 ELMPKGREKESQA-KIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVM 417
+ G + E + K++R + + DSMT ELD ++ SRI+R+A GSG VREV
Sbjct: 360 --ITSGLDDEDGSLKLRRMIYIFDSMTAAELDGDGKVFVDQPSRIVRVACGSGTTVREVE 417
Query: 418 EMLEEYKRLAKIWSKMKGLK 437
++L ++K +A + ++ G K
Sbjct: 418 DLLSQHKMMAGMAKRVGGQK 437
>gi|443894400|dbj|GAC71748.1| signal recognition particle, subunit Srp54 [Pseudozyma antarctica
T-34]
Length = 645
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 242/571 (42%), Positives = 339/571 (59%), Gaps = 89/571 (15%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL+ LG I+ A Q +S +D +++ L + AL++ADV KLV +++ +K V
Sbjct: 1 MVLSDLGRRINSAFQDLSKVPTVDAASIDQLLKSVCNALIEADVNVKLVANLRSQVKSQV 60
Query: 61 N--LDDLAAGH----NKRRIIQQAIFNELCKMLDP--GK-----------PS-------- 93
L+D A + +R+ +Q+A+F+ L ++DP G+ PS
Sbjct: 61 TALLNDKANANWSDAQRRQRVQKAVFDHLVALVDPLHGQSTTDDESGAVVPSANAGPGDI 120
Query: 94 FTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNAT 153
F PKKGKP+VIMFVGLQGSGKTT+CTK A Y+QK+G+K LVCADTFRAGAFDQLKQNA+
Sbjct: 121 FKPKKGKPNVIMFVGLQGSGKTTSCTKLALYYQKRGFKTGLVCADTFRAGAFDQLKQNAS 180
Query: 154 KAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATV 213
K +PFYGSYTE+DPV I+ GV +FK+ ++IIVDTSGRHKQE LF+EMR++ +A V
Sbjct: 181 KINVPFYGSYTETDPVAISAAGVASFKQNRFEVIIVDTSGRHKQEQELFDEMREI-DAAV 239
Query: 214 NPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIF 273
PDL I V+D++IGQAA Q++AFK + GA+IVTK+DGHAKGGGA+SAVAATK+P++F
Sbjct: 240 TPDLTIMVLDANIGQAAEAQSRAFKDAAGYGAIIVTKLDGHAKGGGAISAVAATKTPIMF 299
Query: 274 IGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVV---PMDQQPELLQKLSEGN-F 329
IGTGEH + E F +PF+S+LLGMGD +G MDK+ E+ ++Q E+L+K+ EG F
Sbjct: 300 IGTGEHAADLEPFRAQPFISKLLGMGDITGLMDKMEEMQMNGGQERQREMLKKIEEGGIF 359
Query: 330 TLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQ-AKIKRYMTMMDSMTNEE 388
++R EQ NI+ MGP+ ++ M+PG L G + E+ K+KR M + D+MT EE
Sbjct: 360 SIRDWREQLSNIMGMGPLSKIAGMIPGMGQMLSGAGGDDEAAGGKMKRMMFITDAMTAEE 419
Query: 389 LDSSN-----------PKLMNDS-----------------------------RIMRIARG 408
LDS P + D+ R R+ARG
Sbjct: 420 LDSDGRLFYAPIRSKKPPVSADTKEVAIAESSTAAAKSKKKKKPQQKVRMTARARRVARG 479
Query: 409 SGRQVREVMEMLEEYKRLAKIWSKMKGLK----------------IPKKGEMSALSRNMN 452
SG V+EV E L +Y+ ++ + KM G + +P G++
Sbjct: 480 SGTSVKEVEEFLMQYRLVSSMVKKMGGKQGWLKQMQGLGGGGKGKMPAPGQLPPGMSREQ 539
Query: 453 AQHMSKVLPQGMLKQIGGVGGLQNLMKQMGS 483
M LP + Q+ GG + L++Q+ S
Sbjct: 540 VMQMQNALPPEIKAQLRQPGGREKLLQQIQS 570
>gi|1147795|gb|AAC49735.1| Srp54p [Yarrowia lipolytica]
Length = 536
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 229/461 (49%), Positives = 312/461 (67%), Gaps = 20/461 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A +S IDE L+ L E+ ALL++DV KLV +++ +K V
Sbjct: 1 MVLEDLGKRINGAFANLSKGGDIDE-ALDAMLKEVCSALLESDVNIKLVSQLRQKVKNSV 59
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKML--DPGKPS---FTPKKGKPSVIMFVGLQGSGKT 115
G +K+++IQ+A+F+EL ++ D S F P+KGK +V+MFVGLQGSGKT
Sbjct: 60 KA--TPNGASKKKVIQKALFDELVNLVGVDESAASAAKFKPQKGKSNVVMFVGLQGSGKT 117
Query: 116 TTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEG 175
T+CTK A Y+Q++G+K LVCADTFRAGAFDQLKQNATKAKIPF+GSYTE+DPV +A EG
Sbjct: 118 TSCTKLAVYYQRRGFKVGLVCADTFRAGAFDQLKQNATKAKIPFFGSYTETDPVAVAAEG 177
Query: 176 VETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQ 235
V FKKE ++IIVDTSGRH+QE+ LF EM + A V PD I V+D+SIGQAA Q++
Sbjct: 178 VAKFKKEKFEIIIVDTSGRHRQESELFTEMVDIG-AAVKPDSTIMVLDASIGQAAEPQSR 236
Query: 236 AFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRL 295
AFK + G++I+TKMDGHAKGGGA+SAVAAT +P+IFIGTGEH+ + E F K F+S+L
Sbjct: 237 AFKDASDFGSIILTKMDGHAKGGGAISAVAATNTPIIFIGTGEHIHDLEAFSPKQFISKL 296
Query: 296 LGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLP 355
LG+GD G M+ + + +DQ+ + ++ + EG FTL + +Q N+LKMG + + M+P
Sbjct: 297 LGIGDLQGLMETMQS-LNLDQK-KTMEHIQEGIFTLADLRDQMGNMLKMGSLSSIAGMIP 354
Query: 356 GFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMN-DSRIMRIARGSGRQVR 414
G S + ++E +IKR + ++DSM +ELDS SRI R+ARGS +R
Sbjct: 355 GLSG-MASSISDEEGTRRIKRMIYILDSMNQKELDSDGSIFKEVPSRITRVARGSETSIR 413
Query: 415 EVMEMLEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQH 455
EV E+L++ K +A + S+M G K G M SR NAQ+
Sbjct: 414 EVEEVLQQQKMMASMASRMGG----KNGMM---SRMQNAQN 447
>gi|407926155|gb|EKG19125.1| Signal recognition particle SRP54 subunit GTPase [Macrophomina
phaseolina MS6]
Length = 525
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 229/439 (52%), Positives = 312/439 (71%), Gaps = 6/439 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ A +DEK + + EI AL++ADV KLV ++ +I+K V
Sbjct: 1 MVLQDLGRRINAAVSDLTRAPNLDEKDFDRMVKEICNALVEADVNIKLVAGLRASIRKAV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N D+A G NK+R+IQ+A+F+EL K++DP F P+KGK +VIMFVGLQGSGKTT+CTK
Sbjct: 61 NFKDIAPGVNKKRLIQKAVFDELVKLVDPHSEPFKPRKGKSNVIMFVGLQGSGKTTSCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++ +G+K LVCADTFRAGAFDQLKQNATKAKIP+YGS T++DPV +A EGVE FK
Sbjct: 121 LARWYSARGFKSCLVCADTFRAGAFDQLKQNATKAKIPYYGSLTQTDPVAVAKEGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KE ++IIVDTSGRH+QE LF+EM Q+ +A V P I V+DSSIGQAA QA+AFK+S
Sbjct: 181 KERFEIIIVDTSGRHRQEQDLFDEMIQIQQA-VEPHQTIMVLDSSIGQAAESQARAFKES 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
G++I+TK DG A GGGA+SA AAT P+ F+GTGEHM +FE FD + FV +LLGMGD
Sbjct: 240 ADFGSIILTKTDGAAAGGGAISATAATHCPIAFLGTGEHMLDFEKFDPQRFVGKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G ++ + + +DQ+ E ++ + EG FT+R + +Q QNI+KMGP+ ++ M+PG S
Sbjct: 300 VQGLVEHVQS-LKLDQK-ETMKHIQEGIFTIRDLRDQLQNIMKMGPLSKMAGMIPGLSG- 356
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEM 419
+M ++E K+KR + + DSMT +ELDS ++ SR+ R+A GSG VREV E+
Sbjct: 357 MMGGMDDEEGSLKLKRMIYICDSMTTKELDSDGKCFTDEPSRMTRVAMGSGTSVREVEEL 416
Query: 420 LEEYKRLAKIWSKM-KGLK 437
L + + + KM KG+K
Sbjct: 417 LSQRMLMGGMAKKMGKGMK 435
>gi|71015804|ref|XP_758844.1| hypothetical protein UM02697.1 [Ustilago maydis 521]
gi|46098350|gb|EAK83583.1| hypothetical protein UM02697.1 [Ustilago maydis 521]
Length = 638
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 240/567 (42%), Positives = 336/567 (59%), Gaps = 85/567 (14%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL+ LG I+ A Q +S +D +++ L + AL++ADV KLV +++ +K V
Sbjct: 1 MVLSDLGRRINSAFQDLSKVPTVDAASIDQLLKSVCNALIEADVNVKLVANLRSQVKSQV 60
Query: 61 N--LDDLAAGH----NKRRIIQQAIFNELCKMLDP-------------------GKPS-- 93
L+D + +R+ +Q+A+F+ L ++DP P
Sbjct: 61 TALLNDKTNANWSDAQRRQRVQKAVFDHLVALVDPLHGQTKTDDDSGAVVASANAGPGDI 120
Query: 94 FTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNAT 153
F PKKGKP+VIMFVGLQGSGKTT+CTK A Y+QK+G+K LVCADTFRAGAFDQLKQNA+
Sbjct: 121 FKPKKGKPNVIMFVGLQGSGKTTSCTKLALYYQKRGFKTGLVCADTFRAGAFDQLKQNAS 180
Query: 154 KAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATV 213
K +PFYGSYTE+DPV I+ GV +FK+ ++IIVDTSGRHKQE LF+EMR++ A V
Sbjct: 181 KINVPFYGSYTETDPVAISAAGVASFKQNRFEVIIVDTSGRHKQEQELFDEMREIDTA-V 239
Query: 214 NPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIF 273
PDL I V+D++IGQAA Q++AFKQ+ GA+IVTK+DGHAKGGGA+SAVAATK+P++F
Sbjct: 240 TPDLTIMVLDANIGQAAEAQSRAFKQAAGYGAIIVTKLDGHAKGGGAISAVAATKTPIMF 299
Query: 274 IGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVV---PMDQQPELLQKLSEGN-F 329
IGTGEH + E F +PF+S+LLGMGD SG MDK+ E+ ++Q E+L+K+ +G F
Sbjct: 300 IGTGEHAADLEPFRAQPFISKLLGMGDISGLMDKMEEMQMNGGQERQQEMLKKIGQGGIF 359
Query: 330 TLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQ-AKIKRYMTMMDSMTNEE 388
++R EQ NI+ MGP+ ++ M+PG L G + E+ +K+KR M + D+MT EE
Sbjct: 360 SIRDWREQLSNIMGMGPLSKIAGMIPGMGQMLSGAGGDDEAAGSKMKRMMFITDAMTAEE 419
Query: 389 LDSS--------------------------------------NPKLMNDSRIMRIARGSG 410
LDS K+ +R R+ARGSG
Sbjct: 420 LDSDGRMFYAPIRSKKPPADTKQVAVAESSTAAAKSKKKKKPQSKVRMTARARRVARGSG 479
Query: 411 RQVREVMEMLEEYKRLAK---------IWSKMKG-----LKIPKKGEMSALSRNMNAQHM 456
V+EV E L +Y+ +A ++ +M+G K+P G + M
Sbjct: 480 TSVKEVEEFLMQYRMVANMCKRVGKAGLFKQMQGGAGGKGKMPTPGMLPPGMSREQVMQM 539
Query: 457 SKVLPQGMLKQIGGVGGLQNLMKQMGS 483
LP + Q+ GG + L++Q+ S
Sbjct: 540 QNALPPEIKAQLRQPGGREKLLQQIQS 566
>gi|330933421|ref|XP_003304165.1| hypothetical protein PTT_16633 [Pyrenophora teres f. teres 0-1]
gi|311319393|gb|EFQ87728.1| hypothetical protein PTT_16633 [Pyrenophora teres f. teres 0-1]
Length = 541
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 221/436 (50%), Positives = 316/436 (72%), Gaps = 5/436 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ + +DEK + + EI+ AL++ADV KLV ++ +IK+ V
Sbjct: 1 MVLQDLGRRINAAVTDLTRSPNLDEKAFDAMVKEISNALVEADVNVKLVMNLRQSIKRTV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ LA G NK+R+IQ+A+F+EL KM+DP F P+KGK +VIMFVGLQG+GKTTTCTK
Sbjct: 61 DFKHLAPGVNKKRLIQKAVFDELVKMVDPHAEPFKPRKGKSNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G+K LVCADTFRAGAFDQLKQNATKAKIP+YGS+T++DPV +A EGVE FK
Sbjct: 121 LARWYQARGFKACLVCADTFRAGAFDQLKQNATKAKIPYYGSHTQTDPVVVAGEGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KE ++IIVDTSGRH+QE LF+EM Q+ + V PD I V+D +IGQAA QA+AFK++
Sbjct: 181 KERFEIIIVDTSGRHRQEKDLFDEMVQI-QNVVTPDQTIMVLDGTIGQAAESQARAFKEA 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
GA+I+TK DG A GGGA+SAVAAT +P++F+G GEHM + E F + FVS+LLGMGD
Sbjct: 240 ADFGAIIITKTDGAAAGGGAISAVAATHTPIVFLGNGEHMLDLERFAPQAFVSKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G ++ + + +DQ+ + ++ +++G FT++ + +Q NI+KMGP+ ++ M+PG +
Sbjct: 300 VQGLVEHVQS-LKLDQK-DTMKHITQGIFTIKDLRDQLSNIMKMGPLSKMAGMIPGLGN- 356
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEM 419
+M ++E K+KR + + DSMT +EL+S ++ +R+ RIARGSG VREV E+
Sbjct: 357 MMGGMDDEEGGMKLKRMIYICDSMTEKELESDGKMFVDQPTRMTRIARGSGTSVREVEEL 416
Query: 420 LEEYKRLAKIWSKMKG 435
L +++ +A + KMKG
Sbjct: 417 LTQHRMMAGMAKKMKG 432
>gi|343429513|emb|CBQ73086.1| probable SRP54-signal recognition particle subunit [Sporisorium
reilianum SRZ2]
Length = 637
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 238/569 (41%), Positives = 334/569 (58%), Gaps = 87/569 (15%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL+ L I+ A Q +S +D +++ L + AL++ADV KLV +++ +K V
Sbjct: 1 MVLSDLSRRINSAFQDLSKVPTVDAASIDQLLKSVCNALIEADVNVKLVANLRSQVKSQV 60
Query: 61 N--LDDLAAGH----NKRRIIQQAIFNELCKMLDP-------------------GKPS-- 93
L+D A + +R+ +Q+A+F+ L ++DP P
Sbjct: 61 TALLNDKANANWSDAQRRQRVQKAVFDHLVALVDPLHGQTKTDAESGAVVAAGNAGPGDI 120
Query: 94 FTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNAT 153
F PKKGKP+VIMFVGLQGSGKTT+CTK A Y+QK+G+K LVCADTFRAGAFDQLKQNA+
Sbjct: 121 FKPKKGKPNVIMFVGLQGSGKTTSCTKLALYYQKRGFKTGLVCADTFRAGAFDQLKQNAS 180
Query: 154 KAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATV 213
K +PFYGSYTE+DPV I+ GV +FK+ ++IIVDTSGRHKQE LF+EMR++ +A V
Sbjct: 181 KVNVPFYGSYTETDPVAISAAGVASFKQNRFEVIIVDTSGRHKQEQELFDEMREI-DAAV 239
Query: 214 NPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIF 273
PDL I V+D++IGQAA Q++AFK + GA+IVTK+DGHAKGGGA+SAVAAT +P++F
Sbjct: 240 TPDLTIMVLDANIGQAAEAQSRAFKDAAGYGAIIVTKLDGHAKGGGAISAVAATSTPIMF 299
Query: 274 IGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVV---PMDQQPELLQKLSE-GNF 329
IGTGEH + E F +PF+S+LLGMGD SG MDK+ E+ ++Q E+L+K+ E G+F
Sbjct: 300 IGTGEHAADLEPFRAQPFISKLLGMGDMSGLMDKMEEMQMNGGQERQREMLKKIEEGGHF 359
Query: 330 TLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQA-KIKRYMTMMDSMTNEE 388
++R EQ NI+ MGP+ ++ M+PG L G + E+ K+KR M + D+MT EE
Sbjct: 360 SIRDWREQLSNIMGMGPLSKIAGMIPGMGQMLSGAGGDDEAAGNKMKRMMFITDAMTAEE 419
Query: 389 LDSS---------------------------------------NPKLMNDSRIMRIARGS 409
LDS PK+ ++R R+ARGS
Sbjct: 420 LDSDGRIFTTPVRSKKPPAADTKELAVAESSTAAAKSKKKKKPQPKVRMNARARRVARGS 479
Query: 410 GRQVREVMEMLEEYKRLAKIWSKM---------------KGLKIPKKGEMSALSRNMNAQ 454
G V+EV E L +Y+ + + ++M K+P G +
Sbjct: 480 GTSVKEVEEFLMQYRLVGGMVNRMGKAGWMKQMQGMGAGGKGKMPTPGMLPPGMSREQVM 539
Query: 455 HMSKVLPQGMLKQIGGVGGLQNLMKQMGS 483
M LP + Q+ GG + L++Q+ S
Sbjct: 540 QMQNALPPEIKAQLRQPGGREKLLQQIQS 568
>gi|378727694|gb|EHY54153.1| signal recognition particle protein [Exophiala dermatitidis
NIH/UT8656]
Length = 526
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 232/462 (50%), Positives = 317/462 (68%), Gaps = 7/462 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL+ LG I+ A+ ++ +DEK + + EI ALL ADV +LV+ ++ +I+ V
Sbjct: 1 MVLSDLGRRINAAVSNLNREPNLDEKAFDAMIKEICSALLAADVNVRLVKNLRKSIQSTV 60
Query: 61 NLDDL---AAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTT 117
N DL + ++K+R+IQQA+F+ L +++DP + PKKGK +VIMFVGLQG+GKTTT
Sbjct: 61 NFKDLPPQTSSNSKKRLIQQAVFDHLVQLVDPHAEPYKPKKGKSNVIMFVGLQGAGKTTT 120
Query: 118 CTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVE 177
CTK A Y+ ++G+K LVCADTFRAGA+DQLKQNATKAKIP+YGS T++DP +A EGV
Sbjct: 121 CTKLARYYAQRGFKACLVCADTFRAGAYDQLKQNATKAKIPYYGSLTQTDPAVVAAEGVA 180
Query: 178 TFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAF 237
FKKE ++IIVDTSGRHKQEA LFEEM QV +A + PD I V+D +IGQAA Q+ AF
Sbjct: 181 RFKKEKFEIIIVDTSGRHKQEADLFEEMIQVQKA-IKPDQTIMVLDGTIGQAAEAQSSAF 239
Query: 238 KQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLG 297
K++ GA+I+TK DG A GGGA+SAVAAT +P+IF+GTGEHM + E F KPF+S+LLG
Sbjct: 240 KEAADFGAIIITKTDGGAAGGGAISAVAATHTPIIFLGTGEHMMDLERFAPKPFISKLLG 299
Query: 298 MGDWSGFMDKIHEVVPMDQQPELLQK-LSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPG 356
GD SG +++I + + QK L+EG FTLR M EQ NI+KMGP+ +V M+PG
Sbjct: 300 YGDMSGLIEQIQSITRESAGMKETQKHLAEGIFTLRDMKEQITNIMKMGPLSRVAGMIPG 359
Query: 357 FSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVRE 415
S +M +++ K+KR + + DSMT +ELDS L++ SR++RIA GSG VR+
Sbjct: 360 LGS-MMQGMSDEDGTEKLKRMIYIYDSMTAKELDSDGKILISQPSRMVRIACGSGTSVRD 418
Query: 416 VMEMLEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMS 457
V E+L ++K +A + M K + S + AQ M+
Sbjct: 419 VEELLTQHKVMASLAKNMGAQKKNMQRAQSMMQGGNKAQQMA 460
>gi|396497422|ref|XP_003844973.1| similar to signal recognition particle 54 kda protein
[Leptosphaeria maculans JN3]
gi|312221554|emb|CBY01494.1| similar to signal recognition particle 54 kda protein
[Leptosphaeria maculans JN3]
Length = 533
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 219/436 (50%), Positives = 317/436 (72%), Gaps = 5/436 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ + +DEK + + EI+ AL++ADV KLV ++ +IK+ V
Sbjct: 1 MVLQDLGRRINAAVTDLTRSPNLDEKAFDAMVKEISNALVEADVNVKLVMNLRQSIKRTV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ LA G NK+R+IQ+A+++EL K++DP F P+KGK +VIMFVGLQG+GKTTTCTK
Sbjct: 61 DFKHLAPGVNKKRLIQKAVYDELVKLVDPHAEPFKPRKGKSNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G+K LVCADTFRAGAFDQLKQNATKAKIP+YGS+T++DPV +A EGVE FK
Sbjct: 121 LARWYQARGFKACLVCADTFRAGAFDQLKQNATKAKIPYYGSHTQTDPVVVAGEGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KE ++IIVDTSGRH+QE LF+EM Q+ A V PD I V+D +IGQAA QA+AFK++
Sbjct: 181 KERFEIIIVDTSGRHRQEKDLFDEMVQIQNA-VQPDQTIMVLDGTIGQAAESQARAFKEA 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
GA+++TK DG A GGGA+SAVAAT +P++FIG GEH+ + E F + FVS+LLGMGD
Sbjct: 240 ADFGAIVITKTDGAAAGGGAISAVAATHTPIVFIGNGEHLLDLERFAPQAFVSKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G ++ + + +DQ+ + ++ +++G FT++ + +Q NI+KMGP+ ++ M+PG S+
Sbjct: 300 VQGLVEHVQS-LKLDQK-DTMKHITQGIFTIKDLRDQLSNIMKMGPLSKMAGMIPGLSN- 356
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEM 419
+M ++E K+KR + + DSMT +EL+S ++ +R+ R+ARGSG VREV E+
Sbjct: 357 MMGGMDDEEGGLKLKRMIYICDSMTEKELESDGKMFVDQPTRMTRVARGSGTSVREVEEL 416
Query: 420 LEEYKRLAKIWSKMKG 435
L +++ +A + KMKG
Sbjct: 417 LTQHRMMAGMAKKMKG 432
>gi|388853536|emb|CCF52935.1| probable SRP54-signal recognition particle subunit [Ustilago
hordei]
Length = 646
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 241/571 (42%), Positives = 335/571 (58%), Gaps = 89/571 (15%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL+ LG I+ A Q +S +D +++ L + AL++ADV KLV +++ +K V
Sbjct: 1 MVLSDLGRRINSAFQDLSKVPTVDAASIDQLLKSVCNALIEADVNVKLVANLRSRVKAQV 60
Query: 61 N--LDDLAAGH----NKRRIIQQAIFNELCKMLDP--GK-----------PS-------- 93
L+D A + +R+ +Q+A+F+ L ++DP G+ PS
Sbjct: 61 TALLNDKANANWTDTQRRQRVQKAVFDHLVALVDPFHGQTKTDDESGAVVPSSNAGPGDI 120
Query: 94 FTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNAT 153
F PKKGKP+VIMFVGLQGSGKTT+CTK A Y+QK+G+K LVCADTFRAGAFDQLKQNA+
Sbjct: 121 FKPKKGKPNVIMFVGLQGSGKTTSCTKLALYYQKRGFKTGLVCADTFRAGAFDQLKQNAS 180
Query: 154 KAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATV 213
K +PFYGSYTE+DPV I+ GV +FK+ ++IIVDTSGRHKQE LF+EMR++ + V
Sbjct: 181 KINVPFYGSYTETDPVAISAAGVASFKQNRFEVIIVDTSGRHKQEQELFDEMREI-DVAV 239
Query: 214 NPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIF 273
PDL I V+D++IGQAA Q++AFK++ GA+IVTK+DGHAKGGGA+SAVAAT +P++F
Sbjct: 240 TPDLTIMVLDANIGQAAEAQSRAFKEAAGYGAIIVTKLDGHAKGGGAISAVAATSTPIMF 299
Query: 274 IGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVV---PMDQQPELLQKLSEGN-F 329
IGTGEH + E F +PF+S+LLGMGD SG MDK+ E+ ++Q E+L+K+ EG F
Sbjct: 300 IGTGEHAADLEPFRAQPFISKLLGMGDISGLMDKMEEMQMNGGQERQQEMLKKIGEGGVF 359
Query: 330 TLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQ-AKIKRYMTMMDSMTNEE 388
++R EQ NI+ MGP+ ++ M+PG L G + E+ K+KR M + D+MT EE
Sbjct: 360 SIRDWREQLSNIMGMGPLSKIAGMIPGMGQMLSGAGGDDEAAGGKMKRMMFITDAMTAEE 419
Query: 389 LDSSN----------------------------------------PKLMNDSRIMRIARG 408
LDS K+ +R R+ARG
Sbjct: 420 LDSDGRLFYAPIRSKKPPAPVESKQVAIAESSTAAGRAKKKKKPLQKVRMTARARRVARG 479
Query: 409 SGRQVREVMEMLEEYKRLAKIWSKMKG----------------LKIPKKGEMSALSRNMN 452
SG V+EV E L +Y+ + + KM G K+P G +
Sbjct: 480 SGTSVKEVEEFLMQYRMVGSMVKKMGGKDGFLRQMGMGGAGGKGKMPAPGMLPPGMSREQ 539
Query: 453 AQHMSKVLPQGMLKQIGGVGGLQNLMKQMGS 483
M LP + Q+ GG + L++Q+ S
Sbjct: 540 VMQMQNALPPDIKAQLRQPGGREKLLQQIQS 570
>gi|302506196|ref|XP_003015055.1| hypothetical protein ARB_06815 [Arthroderma benhamiae CBS 112371]
gi|291178626|gb|EFE34415.1| hypothetical protein ARB_06815 [Arthroderma benhamiae CBS 112371]
Length = 504
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 217/444 (48%), Positives = 300/444 (67%), Gaps = 8/444 (1%)
Query: 32 LNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKMLDPGK 91
+ EI ALL ADV +LV++++ +IK V L + NK+R+IQ+A+F++L ++DP
Sbjct: 2 IKEICAALLSADVNVRLVQQLRKSIKAAVQLPSIPPAVNKKRLIQKAVFDQLVALVDPHA 61
Query: 92 PSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQN 151
F PKKGK +VIM VGLQG+GKTTTCTK A ++Q KG+K ALVCADTFRAGAFDQLKQN
Sbjct: 62 EPFKPKKGKSNVIMMVGLQGAGKTTTCTKLARHYQTKGFKAALVCADTFRAGAFDQLKQN 121
Query: 152 ATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEA 211
ATKAKIP+YGS T++DPV ++ EGV FKKE D+IIVDTSGRH+QE LF EM Q+ A
Sbjct: 122 ATKAKIPYYGSLTQTDPVVVSSEGVAKFKKERFDIIIVDTSGRHRQEEDLFAEMTQIQSA 181
Query: 212 TVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPV 271
+ PD I V+DS+IGQAA Q+ AFK + GA+I+TK DGHA GGGA+SAVAAT++P+
Sbjct: 182 -IKPDQTIMVLDSTIGQAAETQSAAFKSAADFGAIIITKTDGHAAGGGAISAVAATRTPI 240
Query: 272 IFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQ-QPELLQKLSEGNFT 330
IF+GTGEHM + E F +PFV +LLGMGD + ++ + V E + +SEG FT
Sbjct: 241 IFLGTGEHMLDLERFAPRPFVQKLLGMGDMASLVEHVQAVTKDSAGAKETYKHISEGIFT 300
Query: 331 LRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQA-KIKRYMTMMDSMTNEEL 389
LR E +I+KMGP+ ++ SM+PG S+ + G + E + K++R + + DSMT EL
Sbjct: 301 LRDFRENITSIMKMGPLSKISSMIPGLSN--ITSGLDDEDGSLKLRRMIYIFDSMTASEL 358
Query: 390 DSSNPKLMND-SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLKIPKKGEMSALS 448
D ++ +R++R+A GSG VREV ++L ++K +A + K+ G K + + L
Sbjct: 359 DGDGKVFVDQPTRVVRLACGSGTTVREVEDLLSQHKMMAGMAKKVGGQKKQMQRAQNMLK 418
Query: 449 RNMNAQHMSKVLPQGMLKQIGGVG 472
Q M+ + Q + +GG G
Sbjct: 419 GGNKEQQMAAM--QKRMAAMGGAG 440
>gi|452981868|gb|EME81627.1| hypothetical protein MYCFIDRAFT_71818 [Pseudocercospora fijiensis
CIRAD86]
Length = 521
Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust.
Identities = 221/436 (50%), Positives = 312/436 (71%), Gaps = 5/436 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ A +DEK + + EI+ AL++ADV LV+ ++ IK V
Sbjct: 1 MVLQDLGRRINAAVNDLTRAQTLDEKAFDGMIKEISNALVEADVNVGLVKNLRQTIKGTV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+DL NK+RIIQ+A+F+ L +++P + + PKKGK +VIMFVGLQG+GKTTTCTK
Sbjct: 61 KFNDLPPHANKKRIIQKAVFDALVDIVNPHQNPYQPKKGKSNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G+K LVCADTFRAGAFDQLKQNATKAKIP+YGS T++DP +A +GVE FK
Sbjct: 121 LARWYQARGFKTCLVCADTFRAGAFDQLKQNATKAKIPYYGSLTQTDPAVVARDGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KE ++IIVDTSGRH QEAALF EM+ + A V+P I V+D+SIGQAA Q++ FK +
Sbjct: 181 KEKFEIIIVDTSGRHHQEAALFAEMKDIQHA-VSPHQTIMVLDASIGQAAESQSREFKDA 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
GA+I+TK DG A GGGA+SAVAAT +P++FIGTGEH+ + E F+ + FVS+LLGMGD
Sbjct: 240 ADFGAIIITKTDGAAAGGGAISAVAATHTPIVFIGTGEHLLDLEKFNPQSFVSKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G ++ + + +DQ+ E ++ ++EG F++R + +Q QNI+KMGP+ ++ M+PG S+
Sbjct: 300 MQGLVEHVQS-LKLDQK-ETMKNITEGKFSVRDLRDQLQNIMKMGPLSKMAGMIPGLSN- 356
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEM 419
+M + ++E K+KR + + DSMT +ELDS + +RI R+ARGSG VREV E+
Sbjct: 357 MMGQMDDEEGGMKLKRMIYICDSMTAKELDSDGKMFVEQPTRITRVARGSGTSVREVEEL 416
Query: 420 LEEYKRLAKIWSKMKG 435
L + + +A + KMKG
Sbjct: 417 LTQQRMMAGMAKKMKG 432
>gi|367012263|ref|XP_003680632.1| hypothetical protein TDEL_0C05320 [Torulaspora delbrueckii]
gi|359748291|emb|CCE91421.1| hypothetical protein TDEL_0C05320 [Torulaspora delbrueckii]
Length = 527
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 218/444 (49%), Positives = 307/444 (69%), Gaps = 13/444 (2%)
Query: 1 MVLAQLGGSISRAIQ-QMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKI 59
MVLA LG I+ A+ +SN ++ L I ALL++DV KLV +++ N+K
Sbjct: 1 MVLADLGKRINSAVNGALSNTQDDYATTVDSMLKAIVTALLESDVNIKLVSKLRNNLKTK 60
Query: 60 VNLDDLAAGHNK-----RRIIQQAIFNELCKMLD--PGKPSFTPKKGKPSVIMFVGLQGS 112
+ LD A+G + +++IQ+A+F+ELC ++D G+P F PKK K +VIMFVGLQGS
Sbjct: 61 L-LDSKASGRSTSNGQVKKLIQKAVFDELCDLVDCQTGEP-FQPKKKKTNVIMFVGLQGS 118
Query: 113 GKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIA 172
GKTT+CTK A Y+ ++G+K LVCADTFRAGAFDQLKQNA KA IPFYGSYTE++PV++A
Sbjct: 119 GKTTSCTKLAVYYARRGFKVGLVCADTFRAGAFDQLKQNAIKANIPFYGSYTETNPVKVA 178
Query: 173 VEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFD 232
EGV FKKE ++IIVDTSGRH QE ALF+EM ++S + V P+ I V+D+SIGQAA
Sbjct: 179 AEGVAKFKKEKFEVIIVDTSGRHHQEEALFQEMVEIS-SVVKPNQTIMVLDASIGQAAEQ 237
Query: 233 QAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFV 292
Q++AFK+S GA+++TKMDGHAKGGGA+SAVAAT +P+IFIGTGEH+ + E F K FV
Sbjct: 238 QSRAFKESADFGAILLTKMDGHAKGGGAISAVAATNTPIIFIGTGEHIHDLEKFSPKSFV 297
Query: 293 SRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFS 352
S+LLG+GD +++ V + ++ + +G FTL +Q Q I+KMGP+ +
Sbjct: 298 SKLLGIGDIESLLEQFQTVSNKEDTKATMENIQQGKFTLLDFKKQMQTIMKMGPLSNIAQ 357
Query: 353 MLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGR 411
M+PG + +M + E+E+ K+K+ + ++DSMT EEL+S ++ SR++R+ARGSG
Sbjct: 358 MIPGMGN-MMSQVGEEETSKKMKKMVYVLDSMTREELESDGRIFIDQPSRMVRVARGSGT 416
Query: 412 QVREVMEMLEEYKRLAKIWSKMKG 435
V EV +L + + +AK+ K
Sbjct: 417 SVFEVEMILMQQQMMAKMAQSTKA 440
>gi|365982761|ref|XP_003668214.1| hypothetical protein NDAI_0A08170 [Naumovozyma dairenensis CBS 421]
gi|343766980|emb|CCD22971.1| hypothetical protein NDAI_0A08170 [Naumovozyma dairenensis CBS 421]
Length = 539
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 237/505 (46%), Positives = 326/505 (64%), Gaps = 22/505 (4%)
Query: 1 MVLAQLGGSISRAIQQ-MSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKI 59
MVLA LG I+ A+ +SN ++ L I ALL++DV LV ++++NIK
Sbjct: 1 MVLADLGKRINGAVNNALSNTEDDYTTTVDSMLKGIVTALLESDVNIALVSKVRSNIKSK 60
Query: 60 VNLDDLAAGHN-----KRRIIQQAIFNELCKMLD-PGKPSFTPKKGKPSVIMFVGLQGSG 113
+ ++ AA + +++IQ+ +F+ELC ++D K FTPKK K +VIMFVGLQGSG
Sbjct: 61 LLSENNAANRSVSNGQTKKLIQKTVFDELCNLVDCEVKEPFTPKKKKSNVIMFVGLQGSG 120
Query: 114 KTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAV 173
KTT+CTK A Y+QK+G+K LVCADTFRAGAFDQLKQNA KA+IPFYGSYTE+DPV++
Sbjct: 121 KTTSCTKLAVYYQKRGFKVGLVCADTFRAGAFDQLKQNAIKARIPFYGSYTETDPVKVVE 180
Query: 174 EGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQ 233
EG+ FKKE ++IIVDTSGRH+QE LF+EM Q+S V P+ I V+D+SIGQAA Q
Sbjct: 181 EGITKFKKEKFEIIIVDTSGRHRQEEELFQEMIQISNV-VKPNQTIMVLDASIGQAAEQQ 239
Query: 234 AQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVS 293
++AFK S GA+I+TKMDGHAKGGGA+SAVAAT +P+IFIGTGEH+ +FE F K FVS
Sbjct: 240 SKAFKDSSDFGAIILTKMDGHAKGGGAISAVAATHTPIIFIGTGEHIHDFEKFSPKSFVS 299
Query: 294 RLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSM 353
+LLG+GD +++ V + ++ + +G FTL +Q Q ++KMGPI + M
Sbjct: 300 KLLGIGDIESLFEQLQTVSNKEDTQATMENIQKGKFTLLDFKKQMQTMMKMGPISNIAQM 359
Query: 354 LPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQ 412
+PG S+ + G E+ SQ K+K+ + + DSMT EEL+S + SR++R+ARGSG
Sbjct: 360 IPGMSNMMSQVGEEETSQ-KMKKMVYVFDSMTKEELESDGRMFIEQPSRMVRVARGSGTS 418
Query: 413 VREVMEMLEEYKRLAKIWSKMKGLKIPKKGEMSALSR-----NM-NAQHMSKVLPQGMLK 466
V EV +L + + +A + + G G+ + R NM N M K+ PQ M +
Sbjct: 419 VLEVEMILMQQRMMANMAQNIGGAAAGASGQPGGMPRMPGMPNMPNIPGMPKMTPQLMQQ 478
Query: 467 QIGGVGGLQNLMKQMGSTKDMMGMF 491
+ NLM K+MM MF
Sbjct: 479 AQQKLSQNPNLM------KNMMNMF 497
>gi|453083661|gb|EMF11706.1| signal recognition particle 54 kDa protein [Mycosphaerella
populorum SO2202]
Length = 519
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 223/436 (51%), Positives = 311/436 (71%), Gaps = 5/436 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ ++ ++ A +DEK + + EI AL++ADV KLV ++ IK V
Sbjct: 1 MVLQDLGRRINASLNDITRAPTLDEKAFDGMIKEICSALMEADVNVKLVANLRKTIKSAV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++L A NK+RIIQ+A+F+ L ++DP + + PKKGK +VIMFVGLQG+GKTTTCTK
Sbjct: 61 KFNELPAHANKKRIIQKAVFDALVDIVDPHQKPYEPKKGKSNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G+K LVCADTFRAGAFDQLKQNATKAKIP+YGS T++DPV +A +GV FK
Sbjct: 121 LARWYQARGFKTCLVCADTFRAGAFDQLKQNATKAKIPYYGSLTQTDPVVVARDGVNQFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KE ++IIVDTSGRH QE ALF EM ++ +A V+P I V+D+SIGQAA Q++AFK +
Sbjct: 181 KEKFEIIIVDTSGRHHQEDALFAEMVEIQQA-VSPHQTIMVLDASIGQAAEAQSRAFKDT 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
GA+I+TK DG A GGGA+SAVAAT +P+++IGTGEH+ + E F+ + FVS+LLGMGD
Sbjct: 240 ADFGAIIITKTDGAAAGGGAISAVAATHTPIVYIGTGEHLLDLEKFNPQSFVSKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G M+ + + + +DQ+ E ++ ++EG FT+R + +Q QNI KMGP+ ++ M+PG S
Sbjct: 300 VQGLMEHV-QTLKLDQK-ETMKNITEGRFTVRDLRDQIQNISKMGPLSKMAGMIPGLSG- 356
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEM 419
+M + E K+KR + + DSMT +ELDS ++ SR+ R+ARGSG VREV E+
Sbjct: 357 MMGGMDDAEGGDKLKRMIIICDSMTQKELDSDGKIFVDQPSRVTRVARGSGSSVREVEEL 416
Query: 420 LEEYKRLAKIWSKMKG 435
L + K +A + K+KG
Sbjct: 417 LAQQKMMAGVAKKVKG 432
>gi|302654843|ref|XP_003019220.1| hypothetical protein TRV_06769 [Trichophyton verrucosum HKI 0517]
gi|291182928|gb|EFE38575.1| hypothetical protein TRV_06769 [Trichophyton verrucosum HKI 0517]
Length = 504
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 216/444 (48%), Positives = 299/444 (67%), Gaps = 8/444 (1%)
Query: 32 LNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKMLDPGK 91
+ EI ALL ADV +LV++++ +IK V L + NK+R+IQ+A+F++L ++DP
Sbjct: 2 IKEICAALLSADVNVRLVQQLRKSIKAAVQLPSIPPAVNKKRLIQKAVFDQLVALVDPHA 61
Query: 92 PSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQN 151
F PKKGK +VIM VGLQG+GKTTTCTK A ++Q KG+K ALVCADT RAGAFDQLKQN
Sbjct: 62 EPFKPKKGKSNVIMMVGLQGAGKTTTCTKLARHYQTKGFKAALVCADTLRAGAFDQLKQN 121
Query: 152 ATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEA 211
ATKAKIP+YGS T++DPV ++ EGV FKKE D+IIVDTSGRH+QE LF EM Q+ A
Sbjct: 122 ATKAKIPYYGSLTQTDPVVVSSEGVAKFKKERFDIIIVDTSGRHRQEEDLFAEMTQIQSA 181
Query: 212 TVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPV 271
+ PD I V+DS+IGQAA Q+ AFK + GA+I+TK DGHA GGGA+SAVAAT++P+
Sbjct: 182 -IKPDQTIMVLDSTIGQAAETQSAAFKSAADFGAIIITKTDGHAAGGGAISAVAATRTPI 240
Query: 272 IFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQ-QPELLQKLSEGNFT 330
IF+GTGEHM + E F +PFV +LLGMGD + ++ + V E + +SEG FT
Sbjct: 241 IFLGTGEHMLDLERFAPRPFVQKLLGMGDMASLVEHVQAVTKDSAGAKETYKHISEGIFT 300
Query: 331 LRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQA-KIKRYMTMMDSMTNEEL 389
LR E +I+KMGP+ ++ SM+PG S+ + G + E + K++R + + DSMT EL
Sbjct: 301 LRDFRENITSIMKMGPLSKISSMIPGLSN--ITSGLDDEDGSLKLRRMIYIFDSMTASEL 358
Query: 390 DSSNPKLMND-SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLKIPKKGEMSALS 448
D ++ +R++R+A GSG VREV ++L ++K +A + K+ G K + + L
Sbjct: 359 DGDGKVFVDQPTRVVRLACGSGTTVREVEDLLSQHKMMAGMAKKVGGQKKQMQRAQNMLK 418
Query: 449 RNMNAQHMSKVLPQGMLKQIGGVG 472
Q M+ + Q + +GG G
Sbjct: 419 GGNKEQQMAAM--QKRMAAMGGAG 440
>gi|366998227|ref|XP_003683850.1| hypothetical protein TPHA_0A03390 [Tetrapisispora phaffii CBS 4417]
gi|357522145|emb|CCE61416.1| hypothetical protein TPHA_0A03390 [Tetrapisispora phaffii CBS 4417]
Length = 537
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 217/446 (48%), Positives = 309/446 (69%), Gaps = 14/446 (3%)
Query: 1 MVLAQLGGSISRAIQQ-MSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKI 59
MVLA LG I+ A+ +SN ++ L I ALL++DV +LV ++++NIK
Sbjct: 1 MVLADLGKRINGAVNSALSNTQDDYVTSVDNMLKMICTALLESDVNIQLVSKLRSNIKST 60
Query: 60 VNLDDLAAGHNK-------RRIIQQAIFNELCKMLD--PGKPSFTPKKGKPSVIMFVGLQ 110
+ +D L G +K +++IQ+++F+ELC ++D F PKK K +VIMFVGLQ
Sbjct: 61 L-MDALKTGGSKSTSNAQTKKLIQKSVFDELCNLVDFENNDNVFLPKKKKTNVIMFVGLQ 119
Query: 111 GSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVR 170
GSGKTT+CTK A Y+QK+G+K LVCADTFRAGAFDQLKQNA KA IPFYGSY+E++PV+
Sbjct: 120 GSGKTTSCTKLAVYYQKRGFKVGLVCADTFRAGAFDQLKQNAIKAHIPFYGSYSEANPVK 179
Query: 171 IAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAA 230
+A EG+E FKKE ++IIVDTSGRH+QE ALF+EM ++S V P+ I V+D+SIGQAA
Sbjct: 180 VAGEGIEKFKKEKFEVIIVDTSGRHRQEEALFQEMVEISN-VVKPNQTIMVLDASIGQAA 238
Query: 231 FDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKP 290
Q++AFK+S GA+I+TKMDGHA+GGGA+SAVAAT +P+IFIGTGEH+ + E F K
Sbjct: 239 EQQSKAFKESADFGAIILTKMDGHARGGGAISAVAATNTPIIFIGTGEHIHDLERFSPKS 298
Query: 291 FVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQV 350
FVS+LLG+GD G +++ V + ++ + +G FTL +Q Q I+KMGP+ +
Sbjct: 299 FVSKLLGIGDIEGLLEQFQTVSNSEDTKATMENIQQGKFTLLDFKKQMQTIMKMGPLSNI 358
Query: 351 FSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGS 409
M+PG S+ +M + E+E+ K+K+ + ++DSMT EEL S +++ SR++R+ARGS
Sbjct: 359 TQMIPGMSN-IMNQVGEEETSKKMKKMIYVLDSMTKEELGSDGRLFIDEPSRMVRVARGS 417
Query: 410 GRQVREVMEMLEEYKRLAKIWSKMKG 435
G V EV +L + + +A++ K
Sbjct: 418 GTSVFEVEMILIQQQMMARMAQSTKA 443
>gi|440299675|gb|ELP92223.1| signal recognition particle 54 kDa protein, putative [Entamoeba
invadens IP1]
Length = 490
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 215/425 (50%), Positives = 299/425 (70%), Gaps = 6/425 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL+QLG SI A+++M+ +T++DE+V+N L EI +LL DV KL+ M TNIK +
Sbjct: 1 MVLSQLGSSIVNALRKMTTSTVLDEEVINTLLKEIEASLLSEDVNPKLIAGMVTNIKSRI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N D+ G +KRR+I+ ++F EL ++DP F PKKGK SV+M VGLQG+GKTTT TK
Sbjct: 61 NATDIPEGVDKRRLIKDSVFEELINLVDPKTEPFKPKKGKTSVLMMVGLQGAGKTTTITK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A Y++ +G+KP++VCADTFRAGA++QL+ NA +A +PF+G ESDPV+ A GV+ F+
Sbjct: 121 LALYYKNRGYKPSVVCADTFRAGAYEQLQMNAKRAGVPFFGIKDESDPVKAASAGVKVFR 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KE D+I+VDTSGRHKQ+ LF+EM+ V A +NPD VIFVMD +IGQAAF QA+AF +
Sbjct: 181 KEKNDIILVDTSGRHKQDTELFKEMQSVKSA-INPDNVIFVMDGAIGQAAFAQAKAFHDA 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V VG+V++TK+DGH+ GGGALSAVAATKSP++FIGTGE ++E E FD + FV RLLGMGD
Sbjct: 240 VDVGSVVITKLDGHSNGGGALSAVAATKSPIVFIGTGEKVNEIEEFDAESFVRRLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G + + +++ L EG+ T+R EQ N+ KMG +G + M+ G +
Sbjct: 300 LKGINKLAKDFAENPEYKTMIKHLQEGSLTVRDWKEQLTNLQKMGQLGNIMQMI-GLNHP 358
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEM 419
+ G + K K + ++DSMT++ELD S ++ D SR+ R+A+GSGR +REV E+
Sbjct: 359 MFQGGN---IEKKFKGFTVILDSMTDKELDGSAKAMLADESRMKRLAKGSGRDIREVGEL 415
Query: 420 LEEYK 424
E+ K
Sbjct: 416 FEQIK 420
>gi|398393398|ref|XP_003850158.1| hypothetical protein MYCGRDRAFT_75124 [Zymoseptoria tritici IPO323]
gi|339470036|gb|EGP85134.1| hypothetical protein MYCGRDRAFT_75124 [Zymoseptoria tritici IPO323]
Length = 523
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 219/436 (50%), Positives = 309/436 (70%), Gaps = 5/436 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ + +DEK + + EI+ AL++ADV KLV ++ IK V
Sbjct: 1 MVLQDLGRRINAAVNDLTRSQTLDEKAFDGMIKEISNALVEADVSIKLVSTLRKTIKTSV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+L NKRRIIQ+A+F+ L ++DP + + P+KGK +VIMFVGLQG+GKTTTCTK
Sbjct: 61 KFSELPPSANKRRIIQKAVFDALVDIVDPHQKPYEPRKGKSNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G+K LVCADTFRAGAFDQLKQNATKAKIP+YGS T++DPV +A +GV FK
Sbjct: 121 LARWYQARGFKTCLVCADTFRAGAFDQLKQNATKAKIPYYGSLTQTDPVVVARDGVNQFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KE ++IIVDTSGRH QE ALF EM ++ A V P + V+D+SIGQAA Q++AFK++
Sbjct: 181 KERFEIIIVDTSGRHHQEDALFAEMTEIQSA-VQPHQTVMVLDASIGQAAESQSRAFKET 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
GA+I+TK DG A GGGA+SAVAAT +P+IFIGTGEH+ + E F+ + FVS+LLGMGD
Sbjct: 240 ADFGAIIITKTDGAAAGGGAISAVAATHTPIIFIGTGEHLLDMEKFNPQSFVSKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G M+ + + +DQ+ + ++ ++EG F++R + +Q QNI+KMGP+ ++ M+PG S
Sbjct: 300 MQGLMEHVQS-LRLDQK-DTMKNITEGKFSVRDLRDQLQNIMKMGPLSKMAGMIPGLSG- 356
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEM 419
+M ++E K+KR + + DSMT +ELDS ++ +R+ R+ARGSG VREV E+
Sbjct: 357 MMGGMDDEEGSMKLKRMIYICDSMTVKELDSDGKIFVDQPARMTRVARGSGTSVREVEEL 416
Query: 420 LEEYKRLAKIWSKMKG 435
L + + + + KMKG
Sbjct: 417 LTQQRMMGNMAKKMKG 432
>gi|452841447|gb|EME43384.1| hypothetical protein DOTSEDRAFT_72702 [Dothistroma septosporum
NZE10]
Length = 522
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 221/437 (50%), Positives = 313/437 (71%), Gaps = 7/437 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A+ ++ IDEK + + E+ AL++ADV KLV ++ IK V
Sbjct: 1 MVLADLGKRINSAVNDLTRGQTIDEKAFDGMVKEVCNALMEADVNIKLVAVLRKTIKNAV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+++ NK+RIIQ+A+F+ L +++P + + PKKGK +VIMFVGLQG+GKTTTCTK
Sbjct: 61 KFNEMPPHANKKRIIQKAVFDALVDIVNPHQTPYNPKKGKSNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G+K LVCADTFRAGAFDQLKQNATKAKIP+YGS T++DPV +A +GV FK
Sbjct: 121 LARWYQARGFKTCLVCADTFRAGAFDQLKQNATKAKIPYYGSLTQTDPVVVARDGVAQFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KE ++IIVDTSGRH QE ALF EM ++ + V P I V+D+SIGQAA Q++AFK++
Sbjct: 181 KERFEIIIVDTSGRHHQEDALFAEMVEI-QGAVQPHQTIMVLDASIGQAAEAQSRAFKET 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
GA+I+TK DG A GGGA+SAVAAT +P++FIGTGEH+ + E F+ + FVS+LLGMGD
Sbjct: 240 ADFGAIIITKTDGAAAGGGAISAVAATHTPIVFIGTGEHLLDLEKFNPESFVSKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G ++ + + +DQ+ E ++ ++EG F++R M +Q QNI+K+GP+ ++ M+PG S+
Sbjct: 300 MQGLVEHVQS-LKLDQK-ETMKNITEGKFSVRDMRDQLQNIMKLGPLSKMAGMIPGLSN- 356
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND--SRIMRIARGSGRQVREVME 418
+M ++E K+KR + + DSMT +ELD S+ K+ D +RI R+ARGSG VREV E
Sbjct: 357 MMGGVDDEEGGMKLKRMIYICDSMTQKELD-SDGKMFKDQPTRITRVARGSGTSVREVEE 415
Query: 419 MLEEYKRLAKIWSKMKG 435
+L + + +A + KMKG
Sbjct: 416 LLSQQQMMAGMAKKMKG 432
>gi|50306973|ref|XP_453464.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49642598|emb|CAH00560.1| KLLA0D09020p [Kluyveromyces lactis]
Length = 530
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 218/454 (48%), Positives = 309/454 (68%), Gaps = 14/454 (3%)
Query: 1 MVLAQLGGSISRAIQQ-MSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKI 59
MVLA LG I+ A+ +SN E + L EI ALL+ DV +LV ++ NIK
Sbjct: 1 MVLADLGKRINNAVTNAISNEQTDYETTVQSMLKEIATALLENDVNIRLVSRLRENIKNT 60
Query: 60 V----NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPS-FTPKKGKPSVIMFVGLQGSGK 114
+ N++ +++IQ+ +F+ELC ++D S F PKK + +VIMFVGLQGSGK
Sbjct: 61 LLSNANVNAKFTNAQTKKLIQKTVFDELCNLVDCEVTSPFQPKKRQSNVIMFVGLQGSGK 120
Query: 115 TTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVE 174
TT+CTK A Y+ K+G+K LVCADTFRAGAFDQLKQNA KAKIPFYGSYTE +PV++A +
Sbjct: 121 TTSCTKLAVYYSKRGYKVGLVCADTFRAGAFDQLKQNAIKAKIPFYGSYTEPNPVKVAKD 180
Query: 175 GVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQA 234
GV+ FKKE ++IIVDTSGRH+QE +LF+EM ++S+A V P I V+D+SIGQAA Q+
Sbjct: 181 GVDKFKKEKFEIIIVDTSGRHQQEDSLFQEMVEISQA-VKPKQTIMVLDASIGQAAEHQS 239
Query: 235 QAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSR 294
+AFK+S G++I+TKMDGHA+GGGA+SAVA+T +P+IFIGTGEH+ +FE F K FVS+
Sbjct: 240 KAFKESADFGSIILTKMDGHARGGGAISAVASTNTPIIFIGTGEHIHDFEKFSPKSFVSK 299
Query: 295 LLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSML 354
LLG+GD M++ V D L+ + +G FTL Q Q I+KMGP+ + +M+
Sbjct: 300 LLGIGDIESLMERFQTVSDQDDAKNTLENIQQGKFTLLDFKNQMQTIMKMGPLSNIANMI 359
Query: 355 PGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQV 413
PG + ++ + E+E+ K+K + + DSMT +EL+S +++ SR++R+A+GSG V
Sbjct: 360 PGMGN-MLNQFSEEETSKKMKTMVYIFDSMTKKELESDGRIFIDEPSRLVRVAKGSGTTV 418
Query: 414 REVMEMLEEYK---RLAKIWSKMKGLKIPKKGEM 444
++ +L + + R+A+ +M GL P KG M
Sbjct: 419 FDIEMLLMQQQMMARMAQTTKQMGGL--PTKGGM 450
>gi|302306335|ref|NP_982582.2| AAR041Wp [Ashbya gossypii ATCC 10895]
gi|299788468|gb|AAS50406.2| AAR041Wp [Ashbya gossypii ATCC 10895]
gi|374105781|gb|AEY94692.1| FAAR041Wp [Ashbya gossypii FDAG1]
Length = 514
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 225/471 (47%), Positives = 312/471 (66%), Gaps = 12/471 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKV-LNECLNEITRALLQADVQFKLVREMQTNIKKI 59
MVLA LG I+ A+ Q N D + L I ALL+ DV KLV +++NIK
Sbjct: 1 MVLADLGKRINAAVAQALNNDTDDYVAGVETMLKAIVTALLENDVNIKLVSSVRSNIKAR 60
Query: 60 VNLDDLA---AGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTT 116
+ D ++++Q+ +F ELC ++D ++ PKK K +V+MFVGLQG+GKTT
Sbjct: 61 LLADKSGRRMGQAQTKQLVQKTVFEELCALVDCQTAAYQPKKKKSNVVMFVGLQGAGKTT 120
Query: 117 TCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGV 176
+CTK A Y+ K+G+K LVCADTFRAGAFDQLKQNA KAKIPFYGSYTE++PVR+A +GV
Sbjct: 121 SCTKLAVYYSKRGFKVGLVCADTFRAGAFDQLKQNAIKAKIPFYGSYTETNPVRVAADGV 180
Query: 177 ETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQA 236
FKKE ++IIVDTSGRH QE ALF+EM ++++ V P+ I V+D+SIGQAA Q++A
Sbjct: 181 AKFKKERFEIIIVDTSGRHHQEDALFQEMVEIAQ-EVKPNQTIMVLDASIGQAAEQQSRA 239
Query: 237 FKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLL 296
FK++ GA+I+TKMDGHAKGGGA+SAVAATK+PVIFIGTGEH+ +FE F K FVS+LL
Sbjct: 240 FKEAADFGAIILTKMDGHAKGGGAISAVAATKTPVIFIGTGEHVHDFEKFSPKSFVSKLL 299
Query: 297 GMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPG 356
G+GD +++ V + ++ + +G FTL +Q Q I+KMGP+ + SM+PG
Sbjct: 300 GIGDIESLLEQFQTVSNKEDTKATMENIQQGRFTLLDFQKQMQTIMKMGPLSNLASMIPG 359
Query: 357 FSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVRE 415
S +M E E+ K+K+ + ++DSM+ EEL+S +++ +R++R+ARGSG V E
Sbjct: 360 MSG-MMSGISEDETSRKMKKMVYVLDSMSREELESDGRVFIDEPARMLRVARGSGTSVFE 418
Query: 416 VMEMLEEYK---RLAKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPQ 462
V +L + + R+A+ M GL +P M LS M QH + L Q
Sbjct: 419 VEMILMQQQMMARMAQGAKNMGGLPGMPAGPGMPRLSPQM-MQHAQQQLRQ 468
>gi|449297804|gb|EMC93821.1| hypothetical protein BAUCODRAFT_93699 [Baudoinia compniacensis UAMH
10762]
Length = 526
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 220/436 (50%), Positives = 307/436 (70%), Gaps = 5/436 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ A +DEK + L +I AL +ADV +LV ++ IK V
Sbjct: 1 MVLQDLGRRINTAVTDLTRAPTLDEKAFDSMLRDIANALAEADVNIRLVANLRKTIKTTV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+L NK+RIIQ+A+F+ L +++P + + PKKGK +VIMFVGLQG+GKTTTCTK
Sbjct: 61 KFSELPPSANKKRIIQKAVFDALVDIVNPHQTPYQPKKGKSNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++ +G+K LVCADTFRAGAFDQLKQNA KAKIP+YGS T++DPV +A +GVE FK
Sbjct: 121 LARWYMARGFKTCLVCADTFRAGAFDQLKQNAIKAKIPYYGSLTQTDPVVVARDGVEKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KE ++IIVDTSGRH QE ALF EM ++ A V P I V+D+SIGQAA Q++AFK++
Sbjct: 181 KERFEIIIVDTSGRHHQEDALFAEMVEIQNA-VQPQQTIMVLDASIGQAAEAQSRAFKET 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
GA+I+TK DG A GGGA+SAVAAT +P++FIGTGEH+ + E F+ + FVS+LLGMGD
Sbjct: 240 ADFGAIIITKTDGAAAGGGAISAVAATHTPIVFIGTGEHLLDLEKFNPQSFVSKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G ++ + + +DQ+ E ++ +SEG F++R M +Q NI+KMGP+ ++ M+PG S+
Sbjct: 300 MQGLVEHVQS-LKLDQK-ETMKNISEGKFSVRDMRDQLGNIMKMGPLSKMAGMIPGLSN- 356
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEM 419
+M ++E K+KR + + DSMT +ELDS + SR+ R+ARGSG VREV E+
Sbjct: 357 MMGSMDDEEGSVKLKRMIYICDSMTVKELDSDGKCFVEQPSRMTRVARGSGTSVREVEEL 416
Query: 420 LEEYKRLAKIWSKMKG 435
L +++ +A + KMKG
Sbjct: 417 LTQHRMMAGMAKKMKG 432
>gi|444321446|ref|XP_004181379.1| hypothetical protein TBLA_0F03220 [Tetrapisispora blattae CBS 6284]
gi|387514423|emb|CCH61860.1| hypothetical protein TBLA_0F03220 [Tetrapisispora blattae CBS 6284]
Length = 536
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 212/436 (48%), Positives = 299/436 (68%), Gaps = 9/436 (2%)
Query: 1 MVLAQLGGSISRAIQ-QMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKI 59
MVLA LG I+ A+ +SN+ ++ L I ALL++DV KLV +M+ NIK
Sbjct: 1 MVLADLGKRINNAVNGALSNSKDDYTTTVDIMLKTIVTALLESDVNIKLVSQMRNNIKSK 60
Query: 60 VNLDDLAAGH----NKRRIIQQAIFNELCKMLD-PGKPSFTPKKGKPSVIMFVGLQGSGK 114
+ A+ +++IQ+ +F+ELC ++D F PKK + +VIMFVGLQGSGK
Sbjct: 61 LMESKTASSSVTNAQTKKLIQETVFDELCNLVDYKSDQPFQPKKRQTNVIMFVGLQGSGK 120
Query: 115 TTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVE 174
TT+CTK A Y+ K+G+K LVCADTFRAGAFDQLKQNA KA IPF+GSYTE+DPV++A E
Sbjct: 121 TTSCTKLAVYYSKRGFKVGLVCADTFRAGAFDQLKQNAIKAHIPFFGSYTEADPVKVAAE 180
Query: 175 GVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQA 234
G+ FKKE D+IIVDTSGRH+QE LF+EM ++S V P+ I V+D+SIGQAA Q+
Sbjct: 181 GIAKFKKEKFDIIIVDTSGRHRQEEELFKEMVEISNV-VKPNQTIMVLDASIGQAAEQQS 239
Query: 235 QAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSR 294
+AFK S GA+I+TKMDGHAKGGGA+SAVAAT +P+IFIGTGEH+ +FE F K FVS+
Sbjct: 240 KAFKDSSDFGAIILTKMDGHAKGGGAISAVAATNTPIIFIGTGEHIHDFEKFSPKSFVSK 299
Query: 295 LLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSML 354
LLG+GD +++ V + ++ + +G FTL +Q Q I+KMGP+ + M+
Sbjct: 300 LLGIGDIESLLEQFQTVSNKEDTKATMENIQQGKFTLLDFKKQMQTIMKMGPLSNIAQMI 359
Query: 355 PGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQV 413
PG + LM + E+E+ K+K+ + ++DSMT +EL+S +++ SR++R+A+GSG V
Sbjct: 360 PGMGN-LMSQVSEEETSQKMKKMVYVLDSMTKQELESDGRIFIDEPSRMVRVAKGSGTSV 418
Query: 414 REVMEMLEEYKRLAKI 429
EV +L + + +A++
Sbjct: 419 FEVEMILMQQQMMARM 434
>gi|255716822|ref|XP_002554692.1| KLTH0F11374p [Lachancea thermotolerans]
gi|238936075|emb|CAR24255.1| KLTH0F11374p [Lachancea thermotolerans CBS 6340]
Length = 534
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 210/439 (47%), Positives = 305/439 (69%), Gaps = 6/439 (1%)
Query: 1 MVLAQLGGSISRAIQQ-MSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIK-K 58
MVLA LG I+ A+ +SN+ ++ L I ALL++DV KLV ++ NI+ K
Sbjct: 1 MVLADLGKRINSAVNSALSNSQDDYVTTVDVMLKTIVTALLESDVNIKLVFSLRNNIRAK 60
Query: 59 IVNLDDLAAGHNK-RRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTT 117
++++ + + + +++IQ+ +F+ELC ++D F PKK K +VIMFVGLQGSGKTT+
Sbjct: 61 LLDVKSRSTNNAQTKKLIQKTVFDELCNLVDGETEPFQPKKRKQNVIMFVGLQGSGKTTS 120
Query: 118 CTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVE 177
CTK A Y+ K+G+K LVCADTFRAGAFDQLKQNA KA+IPFYGSYTE++PV++A EGV
Sbjct: 121 CTKLAVYYSKRGFKVGLVCADTFRAGAFDQLKQNAIKARIPFYGSYTETNPVKVAAEGVA 180
Query: 178 TFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAF 237
FKKE ++IIVDTSGRH+QE LF+EM ++S+ V P+ I V+D+SIGQAA Q++AF
Sbjct: 181 KFKKEKFEVIIVDTSGRHRQEEELFQEMVEISQV-VKPNQTIMVLDASIGQAAEQQSKAF 239
Query: 238 KQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLG 297
K S GA+I+TKMDGHAKGGGA+SAVAATK+P+IFIGTGEH+ +FE F K F+S+LLG
Sbjct: 240 KDSSDFGAIILTKMDGHAKGGGAISAVAATKTPIIFIGTGEHVHDFEKFSPKSFISKLLG 299
Query: 298 MGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGF 357
+GD ++ + + ++ + +G FTL +Q Q I+KMGP+ + SM+PG
Sbjct: 300 IGDIESLLEHFQTLSNKEDTKATMENIQQGKFTLLDFQKQMQTIMKMGPLSNIASMIPGM 359
Query: 358 SSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREV 416
+ ++ + E+E+ ++K+ + +MDSMT +EL+S ++ SRI+R+ARGSG +V
Sbjct: 360 GN-MLNQVSEEETTKRMKKMVFVMDSMTKQELESDGRIFIDQPSRIVRVARGSGTSAFDV 418
Query: 417 MEMLEEYKRLAKIWSKMKG 435
+L + + +A++ K
Sbjct: 419 EMILMQQQMMARMAQSTKA 437
>gi|156844088|ref|XP_001645108.1| hypothetical protein Kpol_538p10 [Vanderwaltozyma polyspora DSM
70294]
gi|156115765|gb|EDO17250.1| hypothetical protein Kpol_538p10 [Vanderwaltozyma polyspora DSM
70294]
Length = 577
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 213/446 (47%), Positives = 304/446 (68%), Gaps = 13/446 (2%)
Query: 1 MVLAQLGGSISRAIQQ-MSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIK-K 58
MVLA LG I+ A+ +SN ++ L I ALL+ADV +LV +++ NIK K
Sbjct: 1 MVLADLGKRINSAVNSALSNTQDDYATAVDILLKNIVTALLEADVNIQLVSKLRANIKAK 60
Query: 59 IVN-----LDDLAAGHNKRRIIQQAIFNELCKMLDPG---KPSFTPKKGKPSVIMFVGLQ 110
+++ + + +++IQ+ +F+ELC ++D + F PKK K ++IMFVGLQ
Sbjct: 61 LLDQNSNNNNQTSKSGQTKKLIQKTVFDELCNLVDGNTDQQQQFIPKKRKTNIIMFVGLQ 120
Query: 111 GSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVR 170
GSGKTT+CTK A Y+QK+G+K LVCADTFRAGAFDQLKQNA KA IPFYGSYTE+DPVR
Sbjct: 121 GSGKTTSCTKLAVYYQKRGFKVGLVCADTFRAGAFDQLKQNAIKAHIPFYGSYTEADPVR 180
Query: 171 IAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAA 230
+A EG+ FKKE D+IIVDTSGRH+QE LF+EM ++S + P+ I V+D+SIGQAA
Sbjct: 181 VASEGIAKFKKEKFDIIIVDTSGRHRQEEQLFQEMIEISNE-IKPNQTIMVLDASIGQAA 239
Query: 231 FDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKP 290
Q++AFK+S GA+I+TKMDGHAKGGGA+SAVAAT +P+IFIGTGEH+ + E F K
Sbjct: 240 EQQSKAFKESSDFGAIILTKMDGHAKGGGAISAVAATNTPIIFIGTGEHIHDLEKFSPKS 299
Query: 291 FVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQV 350
FVS+LLG+GD +++ V + ++ + +G FTL +Q Q I+KMGP+ +
Sbjct: 300 FVSKLLGIGDIESLFEQLQTVSNKEDTKATMENIQQGKFTLLDFKKQMQTIMKMGPLSNI 359
Query: 351 FSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGS 409
M+PG ++ LM + E+E+ K+K+ + ++DSMT EEL+S ++ +R++R+A+GS
Sbjct: 360 TQMIPGMNN-LMNQVGEEETSQKMKKMIYVLDSMTKEELESDGRIFIDQPTRMVRVAKGS 418
Query: 410 GRQVREVMEMLEEYKRLAKIWSKMKG 435
G V EV +L + + +A++ K
Sbjct: 419 GTSVFEVEMILMQQQMMARMAQSTKA 444
>gi|342321672|gb|EGU13604.1| Signal recognition particle 54 kDa protein, putative [Rhodotorula
glutinis ATCC 204091]
Length = 612
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 223/507 (43%), Positives = 324/507 (63%), Gaps = 74/507 (14%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG ++ AI ++ + IDE+ L+ L + ALL++DV LV+ ++ +K V
Sbjct: 1 MVLQDLGKRLNTAINSLTQQSAIDEQALDAVLKSVCAALLESDVNVLLVKRLRDKVKGKV 60
Query: 61 --NLDDLAA----------GHNKRRIIQQAIFNELCKMLDPGK---PSFTPKKGKPSVIM 105
L+++ A G+ ++IIQ+AI++EL ++DPG P+F P KGK VIM
Sbjct: 61 LPQLEEIQAKQGQDADAMQGNKAKQIIQKAIYDELVALVDPGDAAPPAFNPVKGKTQVIM 120
Query: 106 FVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTE 165
VGLQG+GKTTTCTK A ++Q++G K ALVCADTFRAGAFDQLKQNATKAK+PF+GSYTE
Sbjct: 121 MVGLQGAGKTTTCTKLATHYQRRGLKVALVCADTFRAGAFDQLKQNATKAKVPFFGSYTE 180
Query: 166 SDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSS 225
+DPV I+++GV F+ E D+IIVDTSGRH+QE+ LF+EMRQ+ +A V P++V+ V+D +
Sbjct: 181 TDPVSISLQGVTKFRSERFDVIIVDTSGRHRQESELFDEMRQIQDA-VEPNMVVLVLDGA 239
Query: 226 IGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEV 285
IGQAA Q++AFK++ + GA+IVTK+DGHAKGGGA+SAVAAT +P+IFIGTGEH+ + E
Sbjct: 240 IGQAAEAQSRAFKEASNFGAIIVTKLDGHAKGGGAISAVAATNTPIIFIGTGEHLHDLEK 299
Query: 286 FDVKPFVSRLLGMGDWSGFMDKIHE--VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILK 343
F +PF+S++LGMGD G +++ E + ++Q ++++KL +G FT+R + +Q ++
Sbjct: 300 FSPQPFISKMLGMGDMQGLVERAQEMALANPERQEKMMKKLEKGEFTVRDLKDQLATVMG 359
Query: 344 M----------------------------GPIGQVFSMLPGFSSELMPKGREKESQAKIK 375
M GP+ + SM+PG S + G E S+ ++K
Sbjct: 360 MCVAGSFLRSSRSTAFELLTGKCRAYAYRGPLSNLASMIPGMSEMMGGGGEEDVSR-RMK 418
Query: 376 RYMTMMDSMTNEELDS-------------------------SNPKLMND--SRIMRIARG 408
R + DSMT EELDS SNP + + R++R+ARG
Sbjct: 419 RVAFIFDSMTTEELDSDGSLFRDSVPSAKGKEKEKDEEKDPSNPMGLREPNKRVLRVARG 478
Query: 409 SGRQVREVMEMLEEYKRLAKIWSKMKG 435
SG V+EV E+L +++ AK+ +M G
Sbjct: 479 SGTSVQEVEELLAQHQMFAKMAKRMGG 505
>gi|410084092|ref|XP_003959623.1| hypothetical protein KAFR_0K01340 [Kazachstania africana CBS 2517]
gi|372466215|emb|CCF60488.1| hypothetical protein KAFR_0K01340 [Kazachstania africana CBS 2517]
Length = 528
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 208/444 (46%), Positives = 305/444 (68%), Gaps = 12/444 (2%)
Query: 1 MVLAQLGGSISRAIQQ-MSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKI 59
MVLA LG I+ A+ +S+A ++ L IT ALL++DV +LV ++ NIK
Sbjct: 1 MVLADLGKRINSAVNNALSSAQSDYSTTIDNMLKAITTALLESDVNIQLVSRLRNNIKSK 60
Query: 60 V-----NLDDLAAGHNKRRIIQQAIFNELCKMLD--PGKPSFTPKKGKPSVIMFVGLQGS 112
+ N ++ G K+ +IQ+ +++ELC ++D G+ F PKK + ++IMFVGLQGS
Sbjct: 61 LMESKGNTKSVSNGQTKK-LIQKTVYDELCALVDCNDGQEPFRPKKKQSNIIMFVGLQGS 119
Query: 113 GKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIA 172
GKTT+CTK A Y+ K+G+K LVCADTFRAGAFDQLKQNA KA+IPFYGSYTE+DPV++A
Sbjct: 120 GKTTSCTKLAVYYSKRGFKVGLVCADTFRAGAFDQLKQNAIKARIPFYGSYTETDPVKVA 179
Query: 173 VEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFD 232
EG+ FKKE ++IIVDTSGRH QE +LF+EM ++S V P+ I V+D+SIGQAA
Sbjct: 180 AEGIAKFKKEKFEIIIVDTSGRHHQEESLFQEMVEISR-VVKPNQTIMVLDASIGQAAEQ 238
Query: 233 QAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFV 292
Q++AFK+S GA+I+TKMDGHA+GGGA+SAVAAT +P+IFIGTGEH+ + E F + F+
Sbjct: 239 QSKAFKESSDFGAIILTKMDGHARGGGAISAVAATNTPIIFIGTGEHIHDLEKFSPQSFI 298
Query: 293 SRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFS 352
S+LLG+GD + + V + ++ + +G FTL +Q Q I+KMGP+ +
Sbjct: 299 SKLLGIGDMESLFETLQTVTNKEDTKATMENIQQGKFTLLDFKKQMQTIMKMGPLSNIAQ 358
Query: 353 MLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGR 411
M+PG + +M + E+E+ +K+ + ++DSMT EEL+S +++ SR++R+ARGSG
Sbjct: 359 MIPGMGN-MMNQVGEEETSRSMKKMVYVLDSMTKEELESDGRIFIDEPSRMVRVARGSGT 417
Query: 412 QVREVMEMLEEYKRLAKIWSKMKG 435
V +V +L++ + +A++ +K
Sbjct: 418 SVIDVEMILQQQQMMARMAQSVKA 441
>gi|328861050|gb|EGG10154.1| hypothetical protein MELLADRAFT_115576 [Melampsora larici-populina
98AG31]
Length = 617
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 214/466 (45%), Positives = 309/466 (66%), Gaps = 40/466 (8%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A + +IDEK ++ L + ALL +DV LV ++ +K V
Sbjct: 1 MVLADLGKKINAAFADLQRTPLIDEKAVDSLLKGLATALLGSDVNVGLVSNLRNRVKSKV 60
Query: 61 N--LDDLAAGHNKRR-IIQQAIFNELCKMLDPGKPS------------FTPKKGKPSVIM 105
L+ L + K++ ++Q+ +++EL +++P S + PKKGKP+VIM
Sbjct: 61 TPQLEKLISSPAKQKQLVQKTVYDELVALVNPTAASSDATSSSSLALPWQPKKGKPNVIM 120
Query: 106 FVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTE 165
FVGLQGSGKTT+CTK A Y+Q+KG++ ALVCADTFRAGAFDQLKQNA +AK+PF+GS+TE
Sbjct: 121 FVGLQGSGKTTSCTKLAVYYQRKGFRTALVCADTFRAGAFDQLKQNAARAKVPFFGSHTE 180
Query: 166 SDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSS 225
+DP+RI+ GV FK+E ++IIVDTSGRH+QE LFEEM+Q+S A V P+L I V+D +
Sbjct: 181 TDPIRISAAGVTKFKRERFEVIIVDTSGRHRQETELFEEMKQISSA-VQPNLTIMVLDGA 239
Query: 226 IGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEV 285
IGQAA Q +AFK++ GA+IVTKMDGHAKGGGA+SAVAAT++P++FIGTGEH+ + E
Sbjct: 240 IGQAAEAQTRAFKEAAGFGAIIVTKMDGHAKGGGAISAVAATQTPIMFIGTGEHIHDLER 299
Query: 286 FDVKPFVSRLLGMGDWSGFMDKIHEV---VPMDQQPELLQKLSEGNFTLRIMYEQFQNIL 342
F PF+S++LGM D GF++K+ ++ P ++ E+ +++ G FTLR + +Q N+
Sbjct: 300 FSPGPFISKVLGMADVDGFLEKMQDLQQSTPAHKREEMRERMERGEFTLRDLRDQMTNVA 359
Query: 343 KMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSN-----PKLM 397
+MGP+ ++ SM+PG + M G + + +K+KR + + D+M+ +ELDS PK
Sbjct: 360 QMGPLSKIASMIPGMGA--MFGGNDDDMSSKMKRMLFIFDAMSPKELDSDGQLFRAPKAQ 417
Query: 398 NDS--------------RIMRIARGSGRQVREVMEMLEEYKRLAKI 429
RI+RIARGSG V EV M+ ++ +A +
Sbjct: 418 KKDTNGMDEGVPREPHPRILRIARGSGTSVDEVEAMIAQHVMVATM 463
>gi|260941516|ref|XP_002614924.1| hypothetical protein CLUG_04939 [Clavispora lusitaniae ATCC 42720]
gi|238851347|gb|EEQ40811.1| hypothetical protein CLUG_04939 [Clavispora lusitaniae ATCC 42720]
Length = 569
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 219/460 (47%), Positives = 307/460 (66%), Gaps = 29/460 (6%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG + A+ + + + E + + I ALL++DV +LV ++ NI++ +
Sbjct: 21 MVLADLGSRLRNALGSVESGS---EDEVQNMIKNICSALLESDVNVRLVARLRDNIRQKI 77
Query: 61 NLDDLAAGH---NKRRIIQQAIFNELCKMLD-------PGKPSFT---------PKK--G 99
++ +A NKR+ +Q+ +F+ELC ++D P K S T PKK
Sbjct: 78 AVEIKSANESSANKRKKLQKIVFDELCGLVDSHEEPPKPKKLSQTKSVAKHGKKPKKIAA 137
Query: 100 KPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPF 159
+ VIMFVGLQG+GKTT+CTK A Y++K+G+K LVCADTFRAGAFDQLKQNA K+ IPF
Sbjct: 138 ESHVIMFVGLQGAGKTTSCTKLAVYYKKRGFKVGLVCADTFRAGAFDQLKQNAIKSNIPF 197
Query: 160 YGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVI 219
YGSY E+DPV++A EGV+ FK++ D+IIVDTSGRHKQE +LF EM Q+SEA V P I
Sbjct: 198 YGSYLETDPVKVAYEGVKKFKEDKFDIIIVDTSGRHKQEQSLFNEMVQISEA-VQPTQTI 256
Query: 220 FVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEH 279
VMD+SIGQAA QA+AFK+S + G++I+TKMDGHAKGGGA+SAVAAT++P++FIGTGEH
Sbjct: 257 MVMDASIGQAAEGQAKAFKESSNFGSIILTKMDGHAKGGGAISAVAATETPIVFIGTGEH 316
Query: 280 MDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQ--PELLQKLSEGNFTLRIMYEQ 337
+ +FEVF F+S+LLG+GD ++ + + D + + L+ EG FTLR Q
Sbjct: 317 VGDFEVFKPSTFISKLLGIGDVQSLIEHVQSLNLQDDENHKKTLENFKEGKFTLRDFQTQ 376
Query: 338 FQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLM 397
N LKMGP+ + SM+PG S+ +M + E+E+ KIK + +MDSMT +ELDS
Sbjct: 377 MNNFLKMGPLTNIASMIPGMSN-IMNQVGEEETSKKIKNMIYIMDSMTAQELDSDGQLFT 435
Query: 398 ND-SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGL 436
+ +RI+R+ARGSG EV +L++ + +A + K +
Sbjct: 436 KEPTRILRVARGSGCSAVEVEMVLQQQRMMATMAGTAKAM 475
>gi|254580797|ref|XP_002496384.1| ZYRO0C17138p [Zygosaccharomyces rouxii]
gi|238939275|emb|CAR27451.1| ZYRO0C17138p [Zygosaccharomyces rouxii]
Length = 536
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 210/443 (47%), Positives = 300/443 (67%), Gaps = 13/443 (2%)
Query: 1 MVLAQLGGSISRAIQQ-MSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKI 59
MVLA LG I+ A+ +SN ++ L I ALL++DV KLV +++ N++
Sbjct: 1 MVLADLGKRINTAVNSALSNTQDDYATTVDVMLKTIVTALLESDVNIKLVSKLRNNLR-- 58
Query: 60 VNLDDLAAGHNK------RRIIQQAIFNELCKMLD-PGKPSFTPKKGKPSVIMFVGLQGS 112
+ L D +G+ +++IQ+ +F ELC ++D + F PKK K +VIMFVGLQGS
Sbjct: 59 IKLLDSKSGNKSTTNAQTKKLIQKTVFEELCDLVDCKSEQPFQPKKKKTNVIMFVGLQGS 118
Query: 113 GKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIA 172
GKTT+CTK A Y+ ++G+K LVCADTFRAGAFDQLKQNA KA IPFYGSY E+DPV++A
Sbjct: 119 GKTTSCTKLAVYYSRRGFKVGLVCADTFRAGAFDQLKQNAIKAHIPFYGSYVETDPVKVA 178
Query: 173 VEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFD 232
EG+ FKKE ++IIVDTSGRH QE ALF+EM ++S VNP+ I V+D+SIGQAA
Sbjct: 179 AEGIAKFKKEKFEVIIVDTSGRHHQEEALFQEMVEIS-TVVNPNQTIMVLDASIGQAAEQ 237
Query: 233 QAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFV 292
Q++AFK++ GA+++TKMDGHAKGGGA+SAVAAT +P+IFIGTGEH+ + E F K F+
Sbjct: 238 QSKAFKETADFGAILLTKMDGHAKGGGAISAVAATNTPIIFIGTGEHIHDLERFSPKSFI 297
Query: 293 SRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFS 352
S+LLG+GD +++ V + ++ L +G FTL +Q Q I+KMGP+ +
Sbjct: 298 SKLLGIGDIESLLEQFQTVSNTEDTKATMENLQQGKFTLLDFKKQMQTIMKMGPLSNIAQ 357
Query: 353 MLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGR 411
M+PG + + G E+ SQ K+K+ + ++DSMT +EL+S ++ SR++R+A+GSG
Sbjct: 358 MIPGMGNMMSQVGEEETSQ-KMKKMVYVLDSMTRQELESDGRIFVDQPSRLVRVAKGSGT 416
Query: 412 QVREVMEMLEEYKRLAKIWSKMK 434
V EV +L + + +A++ K
Sbjct: 417 SVFEVEMILMQQQMMARMAQTTK 439
>gi|331223009|ref|XP_003324178.1| signal recognition particle subunit SRP54 [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
gi|309303168|gb|EFP79759.1| signal recognition particle subunit SRP54 [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
Length = 635
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 216/470 (45%), Positives = 306/470 (65%), Gaps = 42/470 (8%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A ++ +ID+K L+ L I+ ALL +DV LV ++ +K +
Sbjct: 1 MVLADLGKKINAAFSELQRTPLIDDKALDLLLKGISAALLSSDVNVTLVANLRNRVKSKL 60
Query: 61 N--LDDLAAGHNKRR-IIQQAIFNELCKMLDPGK---------------PSFTPKKGKPS 102
+ L+ L K++ ++ + +F+EL ++ P + PKKGKP+
Sbjct: 61 SPQLEKLIQSPAKQKQLVHKTVFDELVALVSPTGSASDHASSSSRTTEYTPWQPKKGKPN 120
Query: 103 VIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGS 162
VIMFVGLQGSGKTT+CTK A Y+++KG+K ALVCADTFRAGAFDQLKQNATKAKIPFYGS
Sbjct: 121 VIMFVGLQGSGKTTSCTKLAVYYRRKGFKTALVCADTFRAGAFDQLKQNATKAKIPFYGS 180
Query: 163 YTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVM 222
+TE+DP+ I+ GV FK+E ++IIVDTSGRH+QE LFEEM+Q+S A V P+L I V+
Sbjct: 181 HTETDPIAISTAGVTRFKRERFEVIIVDTSGRHRQETELFEEMKQIS-AGVTPNLTIMVL 239
Query: 223 DSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDE 282
D +IGQAA Q +AFK++ GA+IVTKMDGHAKGGGA+SAVAA ++P++FIGTGEH+ +
Sbjct: 240 DGAIGQAAEAQTRAFKEAADFGAIIVTKMDGHAKGGGAISAVAAAQTPIMFIGTGEHLHD 299
Query: 283 FEVFDVKPFVSRLLGMGDWSGFMDKIHEV---VPMDQQPELLQKLSEGNFTLRIMYEQFQ 339
E F +PF+S+LLGMGD F++ + ++ P + E+ Q++ G FT+R + +Q
Sbjct: 300 LERFAPEPFISKLLGMGDIGEFLETMQDLQSATPSQNREEMRQRIERGVFTIRDLRDQMS 359
Query: 340 NILKMGPIGQVFSMLPGFSSELMPKGRE-KESQAKIKRYMTMMDSMTNEELDS------- 391
N+ +MG I ++ SM+PG S+ + G + E K+KR + + D+M+ +ELDS
Sbjct: 360 NLTQMGSISKIASMIPGMSNMMAGLGGDGDEMSQKMKRMVFIFDAMSPQELDSDGSIFRK 419
Query: 392 -----SNPKLMNDS-------RIMRIARGSGRQVREVMEMLEEYKRLAKI 429
N + + D R++RIARGSG V EV ML ++ A +
Sbjct: 420 KRRTGDNTRQLADGEPREPHPRVLRIARGSGTSVDEVEGMLAQHAMFATM 469
>gi|295666878|ref|XP_002793989.1| signal recognition particle 54 kDa protein [Paracoccidioides sp.
'lutzii' Pb01]
gi|226277642|gb|EEH33208.1| signal recognition particle 54 kDa protein [Paracoccidioides sp.
'lutzii' Pb01]
Length = 530
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 218/440 (49%), Positives = 301/440 (68%), Gaps = 6/440 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ ++ IDE+ + + EI ALL ADV +LV+ ++ +IK V
Sbjct: 1 MVLQDLGRRINAAVNDLTRSSNIDEQAFDAMIKEICAALLSADVNVRLVQSLRKSIKSSV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
L NK+R+IQ+ +F++L ++DP F PKKG+ +V+MFVGLQG+GKTTTCTK
Sbjct: 61 QFSSLPPAVNKKRLIQKTVFDQLVALVDPHCEPFKPKKGRSNVVMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G++ ALVCADTFRAGAFDQLKQNATKAKIP+YGS T++DPV +A EGV FK
Sbjct: 121 LARHYQTRGFRAALVCADTFRAGAFDQLKQNATKAKIPYYGSLTQTDPVVVAAEGVAKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KE D+IIVDTSGRHKQEA LF EM Q+ A + PD I V+D +IGQAA Q+ AFK +
Sbjct: 181 KERFDIIIVDTSGRHKQEADLFAEMTQIQTA-IKPDQTILVLDGTIGQAAEIQSSAFKAT 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
GA+I+TK DG A GGGA+SAVAAT +P+IF+GTGEHM + E F KPF+ +LLGMGD
Sbjct: 240 ADFGAIIITKTDGAAAGGGAISAVAATHTPIIFLGTGEHMLDLERFAPKPFIQKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQP-ELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSS 359
+G ++ + V E + ++ G FTLR E +I+KMGP+ ++ SM+PG S+
Sbjct: 300 MAGLVEHVQAVTKDSATAKETYKHITAGIFTLRDFRENITSIMKMGPLSKISSMIPGLSN 359
Query: 360 ELMPKGREKESQA-KIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVM 417
+ G + E + K++R + + DSMT ELD ++ SRI+R+A GSG VREV
Sbjct: 360 --ITSGLDDEDGSLKLRRMIYIFDSMTAAELDGDGKVFIDQPSRIVRVACGSGTTVREVE 417
Query: 418 EMLEEYKRLAKIWSKMKGLK 437
++L ++K +A + K+ G K
Sbjct: 418 DLLSQHKMMAGMAKKVGGQK 437
>gi|238879597|gb|EEQ43235.1| signal recognition particle 54 kDa protein [Candida albicans WO-1]
Length = 556
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 216/450 (48%), Positives = 304/450 (67%), Gaps = 28/450 (6%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG + A+ + + + D+++ + + +I ALL++DV KLV +++ NIK +
Sbjct: 1 MVLADLGSRLRGALSSVESGS--DDEI-QQMIKDICSALLESDVNVKLVAKLRGNIKNKI 57
Query: 61 ---NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPS--------------- 102
N+ + NKR+ +Q+ IF+ELC ++D PKK S
Sbjct: 58 DESNVSKETSAMNKRKKLQKIIFDELCALVDSNVEPPKPKKLSTSTKTINGKKVRLSKES 117
Query: 103 --VIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFY 160
VIMFVGLQG+GKTT+CTK A Y++K+G+K LVCADTFRAGAFDQLKQNA KA IP+Y
Sbjct: 118 SHVIMFVGLQGAGKTTSCTKLAVYYKKRGFKVGLVCADTFRAGAFDQLKQNAIKANIPYY 177
Query: 161 GSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIF 220
GSY E DPV+IA EGV+ FK+E D+IIVDTSGRH+QE LF EM Q+ EA V P I
Sbjct: 178 GSYLEPDPVKIAFEGVQKFKQEKFDIIIVDTSGRHRQEEQLFTEMVQIGEA-VQPTQTIM 236
Query: 221 VMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHM 280
VMD SIGQAA QA+AFK+S + G++I+TKMDGHAKGGGA+SAVAATK+P++FIGTGEH+
Sbjct: 237 VMDGSIGQAAESQARAFKESSNFGSIILTKMDGHAKGGGAISAVAATKTPIVFIGTGEHV 296
Query: 281 DEFEVFDVKPFVSRLLGMGDWSGFMDKIHEV-VPMDQ-QPELLQKLSEGNFTLRIMYEQF 338
+ E+F F+S+LLG+GD G ++ + + + D+ + ++ + EG FTLR Q
Sbjct: 297 GDLEIFKPTTFISKLLGIGDIQGLIEHVQSLNLHQDEGHKQTIEHIKEGKFTLRDFQNQM 356
Query: 339 QNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMN 398
N LKMGP+ + SM+PG S+ +M + ++E+ KIK + +MDSMT +EL+S +
Sbjct: 357 NNFLKMGPLTNIASMIPGLSN-IMSQVGDEETSKKIKNMIYIMDSMTTKELESDGRIFIK 415
Query: 399 D-SRIMRIARGSGRQVREVMEMLEEYKRLA 427
+ SRI+R+ARGSG V EV +L++++ ++
Sbjct: 416 EPSRIVRVARGSGCAVVEVEMILQQHRMMS 445
>gi|366996675|ref|XP_003678100.1| hypothetical protein NCAS_0I00870 [Naumovozyma castellii CBS 4309]
gi|342303971|emb|CCC71755.1| hypothetical protein NCAS_0I00870 [Naumovozyma castellii CBS 4309]
Length = 585
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 236/502 (47%), Positives = 327/502 (65%), Gaps = 16/502 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKV-LNECLNEITRALLQADVQFKLVREMQTNIKKI 59
MVLA LG I+ A+ + T D V ++ L I ALL++DV LV ++ NIK
Sbjct: 62 MVLADLGKRINGAVNNALSNTSDDYAVNVDTMLKAIVTALLESDVNIALVSRLRNNIKSK 121
Query: 60 VNLDDLAAGHNK---RRIIQQAIFNELCKMLDPG-KPSFTPKKGKPSVIMFVGLQGSGKT 115
+ A+G +++IQ+ +F+ELC ++D K F PKK + +VIMFVGLQGSGKT
Sbjct: 122 LMAQKPASGSTNAQTKKLIQKTVFDELCNLVDCDVKEPFNPKKKQCNVIMFVGLQGSGKT 181
Query: 116 TTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEG 175
T+CTK A Y+QK+G+K LVCADTFRAGAFDQLKQNA KA+IPFYGSYTE+DPV++A EG
Sbjct: 182 TSCTKLAVYYQKRGFKVGLVCADTFRAGAFDQLKQNAIKARIPFYGSYTETDPVQVADEG 241
Query: 176 VETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQ 235
++ FKKE ++IIVDTSGRH+QE ALF+EM ++S V P+ I V+D+SIGQAA Q++
Sbjct: 242 IKKFKKEKFEIIIVDTSGRHRQEEALFQEMIEISH-VVKPNQTIMVLDASIGQAAEQQSK 300
Query: 236 AFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRL 295
AFK S GA+I+TKMDGHAKGGGA+SAVAAT +P+IFIGTGEH+ +FE F K FVS+L
Sbjct: 301 AFKDSSDFGAIILTKMDGHAKGGGAISAVAATHTPIIFIGTGEHVHDFEKFSPKSFVSKL 360
Query: 296 LGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLP 355
LG+GD M++I V + +++ + +G FTL +Q Q I+KMGP+ + M+P
Sbjct: 361 LGIGDIESLMEQIQTVSNEEDTKAVMENIQQGKFTLLDFKKQMQTIMKMGPLSNIAQMIP 420
Query: 356 GFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVR 414
G S+ +M + E E+ +K+KR + ++DSMT EELDS + SR++R+A+GSG V
Sbjct: 421 GMSN-MMNQVGEDEASSKMKRMIYVLDSMTKEELDSDGRIFIEQPSRMIRVAKGSGTSVF 479
Query: 415 EVMEMLEEYKRLAKIW--SKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQIGGVG 472
E+ +L + + A + +K G + N M K+ PQ M++Q
Sbjct: 480 EIEGILMQQRMFASMAQSAKAGGAGAGGMPGAGGMPGMPNMPGMPKISPQ-MMQQ----- 533
Query: 473 GLQNLMKQMGSTKDMMGMFGGG 494
Q L + G ++M MFGG
Sbjct: 534 AQQRLRQNPGMMQNMQNMFGGA 555
>gi|241957976|ref|XP_002421707.1| signal recognition particle (SRP) subunit, piutative [Candida
dubliniensis CD36]
gi|223645052|emb|CAX39646.1| signal recognition particle (SRP) subunit, piutative [Candida
dubliniensis CD36]
Length = 567
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 216/450 (48%), Positives = 309/450 (68%), Gaps = 28/450 (6%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG + A+ + + + D+++ ++ + +I ALL++DV KLV +++ NIK +
Sbjct: 1 MVLADLGSRLRGALSSVESGS--DDEI-SQMIKDICSALLESDVNVKLVAKLRGNIKNKI 57
Query: 61 ---NLDDLAAGHNKRRIIQQAIFNELCKMLD----PGKP--------SFTPKKGKPS--- 102
N+ + NKR+ +Q+ IF+ELC ++D P KP + KK + S
Sbjct: 58 EEANVSKETSAMNKRKKLQKIIFDELCALVDSNVEPPKPKKLSTSTKTINGKKVRVSKES 117
Query: 103 --VIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFY 160
VIMFVGLQG+GKTT+CTK A Y++K+G+K LVCADTFRAGAFDQLKQNA KA IP+Y
Sbjct: 118 SHVIMFVGLQGAGKTTSCTKLAVYYKKRGFKVGLVCADTFRAGAFDQLKQNAIKANIPYY 177
Query: 161 GSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIF 220
GSY E DPV+IA EGV+ FK+E D+IIVDTSGRH+QE LF EM Q+ EA V P +
Sbjct: 178 GSYLEPDPVKIAFEGVQKFKQEKFDIIIVDTSGRHRQEEQLFTEMVQIGEA-VQPSQTVM 236
Query: 221 VMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHM 280
VMD SIGQAA QA+AFK+S + G++I+TKMDGHAKGGGA+SAVAATK+P++FIGTGEH+
Sbjct: 237 VMDGSIGQAAESQARAFKESSNFGSIILTKMDGHAKGGGAISAVAATKTPIVFIGTGEHV 296
Query: 281 DEFEVFDVKPFVSRLLGMGDWSGFMDKIHEV-VPMDQ-QPELLQKLSEGNFTLRIMYEQF 338
+ E+F F+S+LLG+GD G ++ + + + D+ + ++ + EG FTL+ Q
Sbjct: 297 GDLEIFKPTTFISKLLGIGDIQGLIEHVQSLNLHQDEGHKQTIEHIKEGKFTLKDFQNQM 356
Query: 339 QNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMN 398
N LKMGP+ + SM+PG S+ +M + ++E+ KIK + +MDSMT +EL+S +
Sbjct: 357 NNFLKMGPLTNIASMIPGLSN-IMSQVGDEETSKKIKNMIYIMDSMTTKELESDGRIFIK 415
Query: 399 D-SRIMRIARGSGRQVREVMEMLEEYKRLA 427
+ SRI+R+ARGSG V EV +L++++ ++
Sbjct: 416 EPSRIVRVARGSGCAVVEVEMILQQHRMMS 445
>gi|68475987|ref|XP_717934.1| hypothetical protein CaO19.3243 [Candida albicans SC5314]
gi|68476118|ref|XP_717868.1| hypothetical protein CaO19.10753 [Candida albicans SC5314]
gi|46439602|gb|EAK98918.1| hypothetical protein CaO19.10753 [Candida albicans SC5314]
gi|46439670|gb|EAK98985.1| hypothetical protein CaO19.3243 [Candida albicans SC5314]
Length = 556
Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust.
Identities = 216/450 (48%), Positives = 304/450 (67%), Gaps = 28/450 (6%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG + A+ + + + D+++ + + +I ALL++DV KLV +++ NIK +
Sbjct: 1 MVLADLGSRLRGALSSVESGS--DDEI-QQMIKDICSALLESDVNVKLVAKLRGNIKNKI 57
Query: 61 ---NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPS--------------- 102
N+ + NKR+ +Q+ IF+ELC ++D PKK S
Sbjct: 58 DESNVSKETSAMNKRKKLQKIIFDELCALVDSNVEPPKPKKLSTSTKTINGKKVRLSKES 117
Query: 103 --VIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFY 160
VIMFVGLQG+GKTT+CTK A Y++K+G+K LVCADTFRAGAFDQLKQNA KA IP+Y
Sbjct: 118 SHVIMFVGLQGAGKTTSCTKLAVYYKKRGFKVGLVCADTFRAGAFDQLKQNAIKANIPYY 177
Query: 161 GSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIF 220
GSY E DPV+IA EGV+ FK+E D+IIVDTSGRH+QE LF EM Q+ EA V P I
Sbjct: 178 GSYLEPDPVKIAFEGVQKFKQEKFDIIIVDTSGRHRQEEQLFTEMVQIGEA-VQPTQTIM 236
Query: 221 VMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHM 280
VMD SIGQAA QA+AFK+S + G++I+TKMDGHAKGGGA+SAVAATK+P++FIGTGEH+
Sbjct: 237 VMDGSIGQAAESQARAFKESSNFGSIILTKMDGHAKGGGAISAVAATKTPIVFIGTGEHV 296
Query: 281 DEFEVFDVKPFVSRLLGMGDWSGFMDKIHEV-VPMDQ-QPELLQKLSEGNFTLRIMYEQF 338
+ E+F F+S+LLG+GD G ++ + + + D+ + ++ + EG FTLR Q
Sbjct: 297 GDLEIFKPTTFISKLLGIGDIQGLIEHVQSLNLHQDEGHKQTIEHIKEGKFTLRDFQNQM 356
Query: 339 QNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMN 398
N LKMGP+ + SM+PG S+ +M + ++E+ KIK + +MDSMT +EL+S +
Sbjct: 357 NNFLKMGPLTNIASMIPGLSN-IMSQVGDEETSKKIKNMIYIMDSMTIKELESDGRIFIK 415
Query: 399 D-SRIMRIARGSGRQVREVMEMLEEYKRLA 427
+ SRI+R+ARGSG V EV +L++++ ++
Sbjct: 416 EPSRIVRVARGSGCAVVEVEMILQQHRMMS 445
>gi|403214075|emb|CCK68576.1| hypothetical protein KNAG_0B01290 [Kazachstania naganishii CBS
8797]
Length = 537
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 210/443 (47%), Positives = 298/443 (67%), Gaps = 13/443 (2%)
Query: 1 MVLAQLGGSISRAIQQM-SNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKI 59
MVLA LG ++ A+ SN ++ L I ALL++DV LV ++ NI+
Sbjct: 1 MVLANLGKRLNSAVNXXXSNPDDDYATTVDTMLKGIVTALLESDVNIALVSRLRGNIR-- 58
Query: 60 VNLDDLAAGHNK------RRIIQQAIFNELCKMLD-PGKPSFTPKKGKPSVIMFVGLQGS 112
L D AAG ++++ + +F ELC ++D F PKK + +VIMFVGLQGS
Sbjct: 59 ATLLDGAAGAKSMSNAQTKKLVHKVVFEELCNLVDCHASEPFKPKKKQTNVIMFVGLQGS 118
Query: 113 GKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIA 172
GKTT+CTK A Y+ K+G+K LVCADTFRAGAFDQLKQNA KA+IPFYGSYTE+DPV++A
Sbjct: 119 GKTTSCTKLAVYYHKRGFKVGLVCADTFRAGAFDQLKQNAIKARIPFYGSYTETDPVKVA 178
Query: 173 VEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFD 232
EG+ FKKE +++IVDTSGRH+QE LF+EM ++ + V P+ I V+D+SIGQAA
Sbjct: 179 EEGITKFKKEKFEIVIVDTSGRHRQEEELFKEMVEIGK-VVKPNQTIMVLDASIGQAAEQ 237
Query: 233 QAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFV 292
Q++AFK S + GA+I+TKMDGHAKGGGA+SA+AAT +P+IFIGTGEH+ +FE F K FV
Sbjct: 238 QSKAFKDSSNFGAIILTKMDGHAKGGGAISAIAATNTPIIFIGTGEHIHDFEKFSPKSFV 297
Query: 293 SRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFS 352
S+LLG+GD+ G M++ + + LL+ + +G FTL +Q Q I+KMGP+ +
Sbjct: 298 SKLLGIGDFEGLMEQFQTISNKEDTQALLENIQQGKFTLLDFQKQMQTIMKMGPLSNIAQ 357
Query: 353 MLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGR 411
M+PG + +M + E E+ +K+ + M+DSMT EL+S +++ SR++R+ARGSG
Sbjct: 358 MIPGMGN-MMNQIGEDEASKSMKKMVYMLDSMTKRELESDGRCFIDEPSRMVRVARGSGT 416
Query: 412 QVREVMEMLEEYKRLAKIWSKMK 434
V +V +L + + +A++ K
Sbjct: 417 SVFDVETLLMQQQMMARMAQTAK 439
>gi|3334344|sp|O42816.1|SRP54_CANAL RecName: Full=Signal recognition particle 54 kDa protein homolog
gi|2739331|emb|CAA10999.1| Srp54 protein [Candida albicans]
Length = 556
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 215/450 (47%), Positives = 303/450 (67%), Gaps = 28/450 (6%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG + A+ + + + D+++ + + +I ALL++DV KLV +++ NIK +
Sbjct: 1 MVLADLGSRLRGALSSVESGS--DDEI-QQMIKDICSALLESDVNVKLVAKLRGNIKNKI 57
Query: 61 ---NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPS--------------- 102
N+ + NKR+ +Q+ IF+ELC ++D PKK S
Sbjct: 58 DESNVSKETSAMNKRKKLQKIIFDELCALVDSNVEPPKPKKLSTSTKTINGKKVRLSKES 117
Query: 103 --VIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFY 160
VIMFVGLQG+GKTT+CTK A Y++K+G+K LVCADTFRAGAFDQLKQNA KA IP+Y
Sbjct: 118 SHVIMFVGLQGAGKTTSCTKLAVYYKKRGFKVGLVCADTFRAGAFDQLKQNAIKANIPYY 177
Query: 161 GSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIF 220
GSY E DPV+IA EGV+ FK+E D+IIVDTSGRH+QE LF EM Q+ EA V P I
Sbjct: 178 GSYLEPDPVKIAFEGVQKFKQEKFDIIIVDTSGRHRQEEQLFTEMVQIGEA-VQPTQTIM 236
Query: 221 VMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHM 280
VMD SIGQAA QA+AFK+S + G++I+TKMDGHAKGGGA+SAVAATK+P++FIGTGEH+
Sbjct: 237 VMDGSIGQAAESQARAFKESSNFGSIILTKMDGHAKGGGAISAVAATKTPIVFIGTGEHV 296
Query: 281 DEFEVFDVKPFVSRLLGMGDWSGFMDKIHEV-VPMDQ-QPELLQKLSEGNFTLRIMYEQF 338
+ E+F F+S+LLG+GD G ++ + + + D+ + ++ + EG FTLR Q
Sbjct: 297 GDLEIFKPTTFISKLLGIGDIQGLIEHVQSLNLHQDEGHKQTIEHIKEGKFTLRDFQNQM 356
Query: 339 QNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMN 398
N LKMGP+ + SM+PG S+ +M + ++E+ KIK + +MDSMT +EL+ +
Sbjct: 357 NNFLKMGPLTNIASMIPGLSN-IMSQVGDEETSKKIKNMIYIMDSMTTKELECDGRIFIK 415
Query: 399 D-SRIMRIARGSGRQVREVMEMLEEYKRLA 427
+ SRI+R+ARGSG V EV +L++++ ++
Sbjct: 416 EPSRIVRVARGSGCAVVEVEMILQQHRMMS 445
>gi|50292271|ref|XP_448568.1| hypothetical protein [Candida glabrata CBS 138]
gi|49527880|emb|CAG61531.1| unnamed protein product [Candida glabrata]
Length = 532
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 218/476 (45%), Positives = 311/476 (65%), Gaps = 18/476 (3%)
Query: 1 MVLAQLGGSISRAIQQ-MSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKI 59
MVLA LG I+ A+ +SN ++ L I+ ALL+ADV LV +++ NI+ +
Sbjct: 1 MVLADLGKRINNAVNSALSNTEDDYVNSIDGMLKGISTALLEADVNIMLVSKVRNNIRSV 60
Query: 60 VNLDDLAAGHN-----KRRIIQQAIFNELCKMLD-PGKPSFTPKKGKPSVIMFVGLQGSG 113
+ LD+ + ++++Q+ +F+ELC ++D F PKK ++IMFVGLQGSG
Sbjct: 61 L-LDNKTTNRSMNNVQTKKLVQKTVFDELCGLVDCTDHKVFQPKKKATNIIMFVGLQGSG 119
Query: 114 KTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAV 173
KTT+CTK A Y+ K+G+K LVCADTFRAGAFDQLKQNA KA+IPFYGSYTE+DPV++A
Sbjct: 120 KTTSCTKLAVYYSKRGFKVGLVCADTFRAGAFDQLKQNAVKARIPFYGSYTETDPVKVAG 179
Query: 174 EGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQ 233
+G+ FKKE D+IIVDTSGRH QE LF EM Q+S + P+ I V+D+SIGQAA Q
Sbjct: 180 DGIAKFKKEKFDVIIVDTSGRHHQEEELFHEMVQISNV-IKPNQTIMVLDASIGQAAEQQ 238
Query: 234 AQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVS 293
++AFK+S GA+I+TKMDGHAKGGGA+SAVAAT +P+ FIGTGEH+ + E F K F+S
Sbjct: 239 SKAFKESSDFGAIILTKMDGHAKGGGAISAVAATNTPIAFIGTGEHIHDLEKFSPKSFIS 298
Query: 294 RLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSM 353
+LLG+GD G +++ V + ++ + +G FTL +Q Q I+KMGP+ + M
Sbjct: 299 KLLGIGDIEGLFEQLKTVSNKEDTKATMENIQQGKFTLLDFKKQMQTIMKMGPLSNIAQM 358
Query: 354 LPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQ 412
+PG + + G E+ SQ K+K+ + ++DSMT EEL+S ++ SR++R+ARGSG
Sbjct: 359 IPGMGNMMSQVGEEETSQ-KMKKMVYVLDSMTKEELESDGRIFIDQPSRLVRVARGSGTS 417
Query: 413 VREVMEMLEEYKRLAKIWSKMK----GLKIPKKGEMSALSRNMNAQHMSKVLPQGM 464
V +V +L + + +A++ K G +P M+ + N M K+ PQ M
Sbjct: 418 VFDVEMILMQQQMMARMAQNAKMGKQGGGMPGMPNMTGMP---NMPGMPKMTPQLM 470
>gi|255722509|ref|XP_002546189.1| signal recognition particle 54 kDa protein [Candida tropicalis
MYA-3404]
gi|240136678|gb|EER36231.1| signal recognition particle 54 kDa protein [Candida tropicalis
MYA-3404]
Length = 555
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 217/450 (48%), Positives = 303/450 (67%), Gaps = 28/450 (6%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG + A+ + + + D+++ + + +I ALL++DV KLV +++ NIK +
Sbjct: 1 MVLADLGSRLRGALSSVESGS--DDEI-QQMIKDICGALLESDVNVKLVAKLRGNIKTKI 57
Query: 61 ---NLDDLAAGHNKRRIIQQAIFNELCKMLD-------PGKPSFTPK----------KGK 100
N+ + NKR+ +Q+ IF+ELC ++D P K S T K K
Sbjct: 58 EEGNIVQETSAMNKRKKLQKIIFDELCALVDSHVEPPKPKKLSTTTKTINGKKIRLSKES 117
Query: 101 PSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFY 160
VIMFVGLQG+GKTT+CTK A Y++K+G+K LVCADTFRAGAFDQLKQNA KA IP+Y
Sbjct: 118 SHVIMFVGLQGAGKTTSCTKLAVYYKKRGFKVGLVCADTFRAGAFDQLKQNAIKANIPYY 177
Query: 161 GSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIF 220
GSY E DPV+IA EGV+ FK+E D+IIVDTSGRH+QE LF EM Q+ EA V P I
Sbjct: 178 GSYLEPDPVKIAFEGVQKFKQEKFDIIIVDTSGRHRQEEQLFTEMVQIGEA-VQPTQTIM 236
Query: 221 VMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHM 280
VMD SIGQAA QA+AFK+S + G++I+TKMDGHAKGGGA+SAVAATK+P++FIGTGEH+
Sbjct: 237 VMDGSIGQAAESQARAFKESSNFGSIILTKMDGHAKGGGAISAVAATKTPIVFIGTGEHI 296
Query: 281 DEFEVFDVKPFVSRLLGMGDWSGFMDKIHEV-VPMDQ-QPELLQKLSEGNFTLRIMYEQF 338
+ E+F F+S+LLG+GD G ++ + + + D+ + ++ + EG FTL+ Q
Sbjct: 297 GDLEIFKPTTFISKLLGIGDIQGLIEHVQSLNLHQDEGHKQTIENIKEGKFTLKDFQNQM 356
Query: 339 QNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMN 398
N LKMGP+ + SM+PG S+ L G E E+ KIK + +MDSMT +EL+S +
Sbjct: 357 NNFLKMGPLTNIASMIPGMSNLLSQVGDE-ETSKKIKNMIYIMDSMTTKELESDGRIFIK 415
Query: 399 D-SRIMRIARGSGRQVREVMEMLEEYKRLA 427
+ SRI+R+ARG+G EV +L++++ ++
Sbjct: 416 EPSRIIRVARGAGCAAVEVEMILQQHRMMS 445
>gi|190347110|gb|EDK39324.2| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
6260]
Length = 560
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 216/460 (46%), Positives = 302/460 (65%), Gaps = 33/460 (7%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIK--- 57
MVLA+LG + A+ +S+ + E+ + + +I ALL++DV KLV +++ NIK
Sbjct: 15 MVLAELGSRLRDALSGVSSGS---EEEIQAMIKDICTALLESDVNVKLVAKLRDNIKAKV 71
Query: 58 -KIVNLDDLAAGHNKRRIIQQAIFNELCKMLD----PGKPS---------------FTPK 97
K V D+ AA NKR+ +Q+ +F+ELC ++D P KP T
Sbjct: 72 KKEVRNDEAAA--NKRKKLQKIVFDELCALVDSHEEPPKPKKLSQQAKQKSIRGKKITKN 129
Query: 98 KGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKI 157
+ +IMFVGLQG+GKTT+CTK A Y++K+G+K LVCADTFRAGAFDQLKQNATK+ I
Sbjct: 130 NAESHIIMFVGLQGAGKTTSCTKLAVYYKKRGFKVGLVCADTFRAGAFDQLKQNATKSSI 189
Query: 158 PFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDL 217
P+YGSY E+DPV++A EGV F+KE D+IIVDTSGRHKQE +LF+EM Q+SEA V P
Sbjct: 190 PYYGSYLETDPVKVAHEGVVKFRKEKFDIIIVDTSGRHKQEQSLFDEMVQISEA-VQPTQ 248
Query: 218 VIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTG 277
I VMD SIGQAA QA+AFK++ G++I+TKMDGHAKGGGA+SAVAAT++P++FIGTG
Sbjct: 249 TIMVMDGSIGQAAESQARAFKETSDFGSIILTKMDGHAKGGGAISAVAATQTPIVFIGTG 308
Query: 278 EHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQP--ELLQKLSEGNFTLRIMY 335
EH+ + E F F+S+LLG+GD ++ + + D + + ++ EG FTLR
Sbjct: 309 EHVGDLETFRPSAFISKLLGIGDIQSLIEHVQSLNLQDDESHKKTMENFKEGKFTLRDFQ 368
Query: 336 EQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPK 395
Q N KMG + + SM+PG S +M + E+E+ +KIK + +MDSMT +ELDS
Sbjct: 369 TQMNNFTKMGSLANIASMIPGMSG-IMSQIGEEETSSKIKNMIFIMDSMTTKELDSDGRI 427
Query: 396 LMND-SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMK 434
RI+R+ARG+G EV +L++ + ++ + S K
Sbjct: 428 FTEQPERIIRVARGAGCYAIEVEMVLQQQRMMSAMASSAK 467
>gi|448081661|ref|XP_004194943.1| Piso0_005471 [Millerozyma farinosa CBS 7064]
gi|359376365|emb|CCE86947.1| Piso0_005471 [Millerozyma farinosa CBS 7064]
Length = 551
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 216/491 (43%), Positives = 313/491 (63%), Gaps = 32/491 (6%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG + A+ + + DEK + + +I ALL+ DV KLV ++ NIK+ +
Sbjct: 1 MVLADLGSRLRGALSSVESG---DEKEIQNMVKDICSALLETDVNIKLVARLRDNIKEKI 57
Query: 61 --NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKK-------------------- 98
++D G NKR+ +Q+ +F+ELC ++D + PKK
Sbjct: 58 KTQINDNEGGSNKRKKLQKIVFDELCGLVDSHEEPPKPKKLSHKQQTTRGAKGGAKATKV 117
Query: 99 -GKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKI 157
+IM VGLQG+GKTT+ TK A Y++K+G+K LVCADTFRAGAFDQLKQNA K+ I
Sbjct: 118 TSDSHIIMLVGLQGAGKTTSATKLALYYKKRGFKIGLVCADTFRAGAFDQLKQNAIKSGI 177
Query: 158 PFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDL 217
P+YGSY E+DPV++A +GV+ FK+E D+IIVDTSGRHKQE +LF EM Q+S+ + P
Sbjct: 178 PYYGSYVETDPVKVAHDGVQKFKQEKFDIIIVDTSGRHKQEQSLFNEMIQISK-MIQPTQ 236
Query: 218 VIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTG 277
I VMD SIGQAA QA+AFK+S G++I+TKMDGHAKGGGA+SAVAAT++P++FIGTG
Sbjct: 237 TIMVMDGSIGQAAESQAKAFKESSDFGSIILTKMDGHAKGGGAISAVAATRTPIVFIGTG 296
Query: 278 EHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQP--ELLQKLSEGNFTLRIMY 335
EH+ + EVF FVS+LLG+GD ++ + + D + + ++ EG FTLR
Sbjct: 297 EHVGDLEVFKPSSFVSKLLGIGDIQSLIEHVQSLNLQDDESHKKTMENFKEGKFTLRDFQ 356
Query: 336 EQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPK 395
Q N +KMGP+ + SM+PG S+ +M + E+E+ +KIK + +MDSMT +ELDS
Sbjct: 357 TQMNNFMKMGPLTNIASMIPGMSN-IMSQVGEEETSSKIKNMIYIMDSMTTKELDSDGRI 415
Query: 396 LMND-SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLKIPKKGEMSALSRNM-NA 453
+++ RI+R+ARG+G V EV +L++ + ++ + + K + + + ++R M A
Sbjct: 416 FIDEPERIVRVARGAGCAVVEVEMVLQQQRLMSSMAASAKTMNAGQGPQAGGMNRMMQQA 475
Query: 454 QHMSKVLPQGM 464
Q + Q M
Sbjct: 476 QQNPNFMQQAM 486
>gi|448508734|ref|XP_003865992.1| Srp54 signal recognition particle (SRP) subunit [Candida
orthopsilosis Co 90-125]
gi|380350330|emb|CCG20551.1| Srp54 signal recognition particle (SRP) subunit [Candida
orthopsilosis Co 90-125]
Length = 554
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 215/452 (47%), Positives = 308/452 (68%), Gaps = 28/452 (6%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG + A+ + + D+++ + + +I ALL++D+ KLV +++ NI+ +
Sbjct: 1 MVLADLGERLRGALSSVEKGS--DDEI-QQMIKDICSALLESDINVKLVAKLRGNIRDKI 57
Query: 61 NLDDL---AAGHNKRRIIQQAIFNELCKMLD----PGKP---SFTPK----------KGK 100
+++ + N+R+ +Q+ I++ELC ++D P KP S T K K
Sbjct: 58 EEENVLKETSSQNRRKKLQKIIYDELCALVDSHAEPPKPKKLSATTKTINGKKVRVSKES 117
Query: 101 PSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFY 160
VIMFVGLQG+GKTT+CTK A Y++K+G+K LVCADTFRAGAFDQLKQNA KA IP+Y
Sbjct: 118 SHVIMFVGLQGAGKTTSCTKLAVYYKKRGFKVGLVCADTFRAGAFDQLKQNAIKANIPYY 177
Query: 161 GSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIF 220
GSY E DPV+IA EGV+ FK+E D+IIVDTSGRH+QE LF EM Q+ EA V+P+ I
Sbjct: 178 GSYLEPDPVKIASEGVQKFKQEKFDIIIVDTSGRHRQEEQLFTEMVQIGEA-VHPNQTIM 236
Query: 221 VMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHM 280
VMD SIGQAA QA+AFK+S G++I+TKMDGHAKGGGA+SAVAATK+P++FIGTGEH+
Sbjct: 237 VMDGSIGQAAESQARAFKESSDFGSIILTKMDGHAKGGGAISAVAATKTPIVFIGTGEHI 296
Query: 281 DEFEVFDVKPFVSRLLGMGDWSGFMDKIHEV-VPMDQ-QPELLQKLSEGNFTLRIMYEQF 338
+FEVF F+S+LLG+GD ++ + + + D+ + ++ + EG FTL+ Q
Sbjct: 297 GDFEVFKPTTFISKLLGIGDIQSLIEHVQSLNLHQDEGHKQTIENIKEGKFTLKDFQNQM 356
Query: 339 QNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMN 398
N +KMGP+ + SM+PG S LM + E+E+ KI+ + +MDSMT +EL+S +
Sbjct: 357 NNFMKMGPLTNIASMIPGMSG-LMSQVGEEETSNKIRNMIFIMDSMTTKELESDGRIFIK 415
Query: 399 D-SRIMRIARGSGRQVREVMEMLEEYKRLAKI 429
+ SRI+RIARGSG V EV +L++++ ++ +
Sbjct: 416 EPSRIVRIARGSGCSVVEVEMILQQHRMMSSM 447
>gi|344232045|gb|EGV63924.1| signal recognition particle protein [Candida tenuis ATCC 10573]
Length = 554
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 210/456 (46%), Positives = 306/456 (67%), Gaps = 27/456 (5%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG + A+ +S+ + D+++ L +I+ AL++ DV FKLV ++ NI++ +
Sbjct: 1 MVLADLGNRLKGALSSVSSGS--DDEIA-ALLKDISNALIENDVNFKLVFRLKENIRQKI 57
Query: 61 NLDDLAAG--HNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPS---------------- 102
+ D + NKR+ +Q+A+++EL ++D + KK S
Sbjct: 58 DTDSFKSDTVANKRKKLQKAVYDELVALVDAYEEPPQIKKLSASSTTAKGKKKLVKKRES 117
Query: 103 -VIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYG 161
VIMFVGLQG+GKTT+CTK A Y++K+G+K LVCADTFRAGAFDQLKQNA KA IP+YG
Sbjct: 118 HVIMFVGLQGAGKTTSCTKLAVYYKKRGYKVGLVCADTFRAGAFDQLKQNAIKANIPYYG 177
Query: 162 SYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFV 221
SY E+DPV+++ EGV FK E D++IVDTSGRHKQE +LF EM Q+SEA + P+ + V
Sbjct: 178 SYLETDPVKVSAEGVAKFKAERFDIVIVDTSGRHKQEESLFSEMVQISEAIL-PNQTVMV 236
Query: 222 MDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMD 281
MD SIGQAA +QA+AFK++ G++I+TKMDGHAKGGGA+SA+AATK+P+IFIGTGEH+
Sbjct: 237 MDGSIGQAAEEQAKAFKEASDFGSIILTKMDGHAKGGGAISAIAATKTPIIFIGTGEHVA 296
Query: 282 EFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQ--PELLQKLSEGNFTLRIMYEQFQ 339
+FE+F F+S+LLG+GD MD + + D + + ++ + EG FT+R Q
Sbjct: 297 DFELFKPSSFISKLLGIGDLQSLMDHVKSLNLQDDENHKKTMEHIKEGKFTVRDFQTQMN 356
Query: 340 NILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND 399
N +KMGP+ + SM+PG + LM E+E+ AK+K + +MDSMT +ELDS +++
Sbjct: 357 NFMKMGPLTNIASMIPGMGN-LMGAVGEEEASAKMKDMIYIMDSMTQQELDSDGLLFIDE 415
Query: 400 -SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMK 434
RI+R+ARG+G V +V +L++ + ++ + K
Sbjct: 416 PERIVRVARGAGCAVIDVEMVLQQQQMMSTMAQTAK 451
>gi|448086145|ref|XP_004196030.1| Piso0_005471 [Millerozyma farinosa CBS 7064]
gi|359377452|emb|CCE85835.1| Piso0_005471 [Millerozyma farinosa CBS 7064]
Length = 556
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 215/491 (43%), Positives = 313/491 (63%), Gaps = 32/491 (6%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG + A+ + + DEK + + +I ALL+ DV KLV ++ NIK+ +
Sbjct: 1 MVLADLGSRLRGALSSVESG---DEKEIQNMVKDICSALLETDVNIKLVARLRDNIKEKI 57
Query: 61 --NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKK-------------------- 98
++D G NKR+ +Q+ +F+ELC ++D + PKK
Sbjct: 58 KTQINDNEGGSNKRKKLQKIVFDELCALVDSHEEPPKPKKLSHRQQTTRGAKGGAKATKV 117
Query: 99 -GKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKI 157
+IM VGLQG+GKTT+ TK A Y++K+G+K LVCADTFRAGAFDQLKQNA K+ I
Sbjct: 118 TSDSHIIMLVGLQGAGKTTSATKLALYYKKRGFKIGLVCADTFRAGAFDQLKQNAIKSGI 177
Query: 158 PFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDL 217
P+YGSY E+DPV++A +GV+ FK+E D+IIVDTSGRHKQE +LF EM Q+S+ + P
Sbjct: 178 PYYGSYVETDPVKVAHDGVQKFKQEKFDIIIVDTSGRHKQEQSLFNEMIQISK-MIQPTQ 236
Query: 218 VIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTG 277
I VMD SIGQAA QA+AFK+S G++I+TKMDGHAKGGGA+SAVAAT++P++FIGTG
Sbjct: 237 TIMVMDGSIGQAAESQAKAFKESSDFGSIILTKMDGHAKGGGAISAVAATRTPIVFIGTG 296
Query: 278 EHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQP--ELLQKLSEGNFTLRIMY 335
EH+ + +VF FVS+LLG+GD ++ + + D + + ++ EG FTLR
Sbjct: 297 EHVGDLDVFKPSSFVSKLLGIGDIQSLIEHVQSLNLQDDESHKKTMENFKEGKFTLRDFQ 356
Query: 336 EQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPK 395
Q N +KMGP+ + SM+PG S+ +M + E+E+ +KIK + +MDSMT +ELDS
Sbjct: 357 TQMNNFMKMGPLTNIASMIPGMSN-IMSQVGEEETSSKIKNMIYIMDSMTTKELDSDGRI 415
Query: 396 LMND-SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLKIPKKGEMSALSRNM-NA 453
+++ RI+R+ARG+G V EV +L++ + ++ + + K + + + ++R M A
Sbjct: 416 FIDEPERIVRVARGAGCAVVEVEMVLQQQRLMSSMAASAKTMNAGQGPQAPGMNRMMQQA 475
Query: 454 QHMSKVLPQGM 464
Q + Q M
Sbjct: 476 QQNPNFMQQAM 486
>gi|401842173|gb|EJT44430.1| SRP54-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 539
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 215/482 (44%), Positives = 313/482 (64%), Gaps = 20/482 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIID-EKVLNECLNEITRALLQADVQFKLVREMQTNIKKI 59
MVLA LG I+ A+ + T D ++ L I ALL++DV LV +++ NI+
Sbjct: 1 MVLADLGKRINSAVNSAISNTQDDFATSVDVMLKGIVTALLESDVNIALVSKLRNNIRSQ 60
Query: 60 V----NLDDLAAGHNKRRIIQQAIFNELCKMLDPG---KPSFTPKKGKPSVIMFVGLQGS 112
+ ++ +++IQ+ +F+ELCK++ G + +F PKK K ++IMFVGLQGS
Sbjct: 61 LLSENRSENSTTNAQTKKLIQKTVFDELCKLVTCGGNEEKAFLPKKRKTNIIMFVGLQGS 120
Query: 113 GKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIA 172
GKTT+CTK A Y+ K+G+K LVCADTFRAGAFDQLKQNA +A+IPFYGSYTE+DP ++A
Sbjct: 121 GKTTSCTKLAVYYSKRGFKVGLVCADTFRAGAFDQLKQNAIRARIPFYGSYTETDPAKVA 180
Query: 173 VEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFD 232
EG+ FKKE D+IIVDTSGRH+QE LF+EM ++S + P+ I V+D+SIGQAA
Sbjct: 181 EEGINKFKKEKFDIIIVDTSGRHRQEEELFQEMVEISNV-IRPNQTIMVLDASIGQAAEQ 239
Query: 233 QAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFV 292
Q++AFK+S GA+++TKMDGHAKGGGA+SAVAAT +P+IFIGTGEH+ + E F K F+
Sbjct: 240 QSKAFKESSDFGAILLTKMDGHAKGGGAISAVAATNTPIIFIGTGEHIHDLEKFSPKSFI 299
Query: 293 SRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFS 352
S+LLG+GD +++ V + ++ + +G FTL +Q Q I+KMGP+ +
Sbjct: 300 SKLLGIGDIESLFEQLQTVSNKEDAKATMENIQKGKFTLLDFKKQMQTIMKMGPLSNIAQ 359
Query: 353 MLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGR 411
M+PG S+ + G E+ SQ K+K+ + ++DSMT EEL+S + +R++R+A+GSG
Sbjct: 360 MIPGMSNMMNQVGEEETSQ-KMKKMVYVLDSMTREELESDGRMFVEQPTRMVRVAKGSGT 418
Query: 412 QVREVMEMLEEYK---RLAKIWSKMK------GLKIPKKGEMSALSRNMNAQHMSKVLPQ 462
V EV +L + + R+A+ ++ + ++P M + N M KV PQ
Sbjct: 419 SVFEVEMILMQQQMMARMAQTATQQQPGAPGANARMPGMPNMPGMPGMPNMPGMPKVTPQ 478
Query: 463 GM 464
M
Sbjct: 479 MM 480
>gi|403417915|emb|CCM04615.1| predicted protein [Fibroporia radiculosa]
Length = 360
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 189/351 (53%), Positives = 260/351 (74%), Gaps = 8/351 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG ++ A+ ++ A ++DEKVL+ L E+ ALL++DV KLV ++ +K V
Sbjct: 1 MVLADLGRKLNAALSSLNRAPVVDEKVLDALLKEVCAALLESDVNVKLVASLRAKVKAKV 60
Query: 61 NLD-----DLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKT 115
D N++ I+Q+AIF+EL +++DPG + PKKG+P+VIM VGLQG+GKT
Sbjct: 61 KASLEGGADKGKETNRKNIVQKAIFDELVQLVDPGVEPYKPKKGQPNVIMAVGLQGNGKT 120
Query: 116 TTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEG 175
TTCTK A Y+QK+G+K +VCADTFRAGAFDQ +Q+ATKAK+ ++GSYTE+DPV IA +G
Sbjct: 121 TTCTKLAVYYQKRGFKSCIVCADTFRAGAFDQTRQSATKAKVAYFGSYTETDPVAIAAQG 180
Query: 176 VETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQ 235
V FKKE D+IIVDTSGRHKQE+ LFEEM Q+ EA V P++ + ++D+SIGQAA Q++
Sbjct: 181 VSKFKKERFDVIIVDTSGRHKQESELFEEMVQIGEA-VKPNMTVLILDASIGQAAEAQSR 239
Query: 236 AFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRL 295
AFK S GA+IVTKMDGHAKGGGA+SAVAATK+P+IF+G GEH+ + + F +PF+S+L
Sbjct: 240 AFKDSADFGAIIVTKMDGHAKGGGAISAVAATKTPIIFLGVGEHLQDLDKFSPQPFISKL 299
Query: 296 LGMGDWSGFMDKIHEVVPM--DQQPELLQKLSEGNFTLRIMYEQFQNILKM 344
LG+GD G M+ +H++ D+Q E+ +KL EG ++R EQ QN++ M
Sbjct: 300 LGLGDVQGLMEHMHDLATQNPDKQKEMAKKLEEGKLSIRDWREQIQNVMNM 350
>gi|354544876|emb|CCE41601.1| hypothetical protein CPAR2_801530 [Candida parapsilosis]
Length = 559
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 213/452 (47%), Positives = 304/452 (67%), Gaps = 28/452 (6%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG + A+ + + D+++ + + +I ALL++D+ KLV +++ NI+ +
Sbjct: 1 MVLADLGERLRGALSSVEKGS--DDEI-QQMIKDICSALLESDINVKLVAKLRGNIRDKI 57
Query: 61 ---NLDDLAAGHNKRRIIQQAIFNELCKMLD-------PGKPSFTPK----------KGK 100
N+ + N+R+ +Q+ I++ELC ++D P K S T K K
Sbjct: 58 EEGNVLKETSSQNRRKKLQKIIYDELCALVDSHVEPPKPKKLSATTKTINGKKVRVSKES 117
Query: 101 PSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFY 160
VIMFVGLQG+GKTT+CTK A Y++K+G+K LVCADTFRAGAFDQLKQNA KA IP+Y
Sbjct: 118 SHVIMFVGLQGAGKTTSCTKLAVYYKKRGFKVGLVCADTFRAGAFDQLKQNAIKANIPYY 177
Query: 161 GSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIF 220
GSY E DPV+IA EGV+ FK+E D+IIVDTSGRH+QE LF EM Q+ EA ++P I
Sbjct: 178 GSYLEPDPVKIAAEGVQKFKQEKFDIIIVDTSGRHRQEEQLFTEMVQIGEA-IHPSQTIM 236
Query: 221 VMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHM 280
VMD SIGQAA QA+AFK+S G++I+TKMDGHAKGGGA+SAVAATK+P++FIGTGEH+
Sbjct: 237 VMDGSIGQAAESQARAFKESSDFGSIILTKMDGHAKGGGAISAVAATKTPIVFIGTGEHI 296
Query: 281 DEFEVFDVKPFVSRLLGMGDWSGFMDKIHEV-VPMDQ-QPELLQKLSEGNFTLRIMYEQF 338
+ EVF F+S+LLG+GD ++ + + + D+ + ++ + EG FTL+ Q
Sbjct: 297 GDLEVFKPTTFISKLLGIGDIQSLIEHVQSLNLHQDEGHKQTIENIKEGKFTLKDFQNQM 356
Query: 339 QNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMN 398
N +KMGP+ + SM+PG S LM + E+E+ KI+ + +MDSMT +EL+S +
Sbjct: 357 NNFMKMGPLTNIASMIPGMSG-LMSQVGEEETSNKIRNMIFIMDSMTTKELESDGRMFIK 415
Query: 399 D-SRIMRIARGSGRQVREVMEMLEEYKRLAKI 429
+ SRI+RIARGSG V EV +L++++ ++ +
Sbjct: 416 EPSRIVRIARGSGCSVVEVEMILQQHRMMSSM 447
>gi|401826054|ref|XP_003887121.1| signal recognition particle GTPase [Encephalitozoon hellem ATCC
50504]
gi|392998279|gb|AFM98140.1| signal recognition particle GTPase [Encephalitozoon hellem ATCC
50504]
Length = 466
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 206/476 (43%), Positives = 322/476 (67%), Gaps = 21/476 (4%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
++ +LG SI+ + + N+ D+ + + EI +L+ ++V K V +++ +++ ++
Sbjct: 1 MITELGRSITNTLSNLLNSPTTDQDI-ETAIKEICNSLILSNVNPKYVGDLRNSLRAKLD 59
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
++ G NK R++Q A++ +L +LDP S+ +KGK +V++FVGLQGSGKTT+ KY
Sbjct: 60 PKEMPPGFNKARMVQNAVYEKLVDLLDPKAESYKVEKGKANVVVFVGLQGSGKTTSICKY 119
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKK 181
A +++KKG+K +VCADTFRAGAFDQ++QNA K K+PF+GS +E+DPV++A GVE F+K
Sbjct: 120 ANFYKKKGYKVGIVCADTFRAGAFDQVRQNALKIKVPFFGS-SEADPVKVAGAGVERFRK 178
Query: 182 ENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSV 241
E +LI+VDTSGRH QE+ LF EM+ + + P+ ++FVMD+ IGQ+A DQA FK +V
Sbjct: 179 EKFELILVDTSGRHTQESELFTEMKDIVRE-IRPNSIVFVMDAGIGQSAEDQAVGFKNAV 237
Query: 242 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 301
VG++I+TK+DG K GGALS+VAATK P+ F+GTGE M++ EVFD + FVSR+LGMGD
Sbjct: 238 DVGSIILTKIDGTNKAGGALSSVAATKCPIEFVGTGEGMEDLEVFDARRFVSRMLGMGDV 297
Query: 302 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 361
G M+K+ + +D++ E+++KL +G FTL Y+QFQ IL +GPI ++ M+PGFS
Sbjct: 298 EGLMEKVGS-LGIDEK-EVVKKLRQGKFTLGDFYDQFQKILSLGPISKLLEMMPGFSGLS 355
Query: 362 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEML 420
+P ++ES K+ + + DSM+ ELDS+ + SR+MR+ARGSG V+ V+E+L
Sbjct: 356 LP---DEES---FKKLIYVFDSMSRGELDSTGQIFEREPSRVMRVARGSGTSVQGVVEIL 409
Query: 421 EEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSK-------VLPQGMLKQIG 469
++K+ + K+ IP M ++M+ +K +LP+ +L ++G
Sbjct: 410 TQFKKAHAVMQKIS--SIPGIESMMGNPKSMSLSQKAKLKEQARNILPKDLLDRMG 463
>gi|150866311|ref|XP_001385860.2| Signal recognition particle 54 kDa protein [Scheffersomyces
stipitis CBS 6054]
gi|149387567|gb|ABN67831.2| Signal recognition particle 54 kDa protein [Scheffersomyces
stipitis CBS 6054]
Length = 561
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 209/449 (46%), Positives = 301/449 (67%), Gaps = 27/449 (6%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG + A+ + +A+ DE++ N+ + ++ ALL++DV KLV +++ NIK+ V
Sbjct: 1 MVLADLGSRLRGALSSVESAS--DEEI-NQMIKDVCTALLESDVNIKLVVKLRDNIKQKV 57
Query: 61 NLDDLA--AGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPS---------------- 102
D + + NKR+ +Q+ I++EL ++D + PKK S
Sbjct: 58 KTDVTSEESAINKRKKLQKIIYDELVGLVDSHEEPPKPKKLSTSTKVINGKKKKVAKTNS 117
Query: 103 -VIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYG 161
+IMFVGLQG+GKTT+CTK A Y++K+G+K LVCADTFRAGAFDQLKQNA KA IP+YG
Sbjct: 118 HIIMFVGLQGAGKTTSCTKLAVYYKKRGFKVGLVCADTFRAGAFDQLKQNAIKASIPYYG 177
Query: 162 SYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFV 221
SY E DPV+IA EGV F+ E D+IIVDTSGRH+QE LF+EM Q+ E + P I V
Sbjct: 178 SYLEQDPVKIAYEGVTKFRSEKFDIIIVDTSGRHRQEHQLFQEMVQIGE-MIQPTQTIMV 236
Query: 222 MDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMD 281
MD SIGQAA QA+AFK+S + G++I+TKMDGHAKGGGA+SAVAATK+P++FIGTGEH+
Sbjct: 237 MDGSIGQAAESQAKAFKESSNFGSIILTKMDGHAKGGGAISAVAATKTPIVFIGTGEHIG 296
Query: 282 EFEVFDVKPFVSRLLGMGDWSGFMDKIH--EVVPMDQQPELLQKLSEGNFTLRIMYEQFQ 339
+ E+F F+S+LLG+GD ++ + + + + ++ + EG FTL+ Q
Sbjct: 297 DLEIFKPTTFISKLLGIGDIQSLIEHVQGLNLQNDENHKQTMENIKEGKFTLKDFQNQMN 356
Query: 340 NILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND 399
N LKMGP+ + SM+PG S+ +M + E+E+ KIK + +MDSMT EEL+S ++
Sbjct: 357 NFLKMGPLTNIASMIPGLSN-IMSQVGEEETSKKIKNMVYIMDSMTTEELESDGRIFVDQ 415
Query: 400 -SRIMRIARGSGRQVREVMEMLEEYKRLA 427
SRI+R+A+GSG E+ +L++++ ++
Sbjct: 416 PSRILRVAKGSGCAAVEIEMVLQQHRLMS 444
>gi|323302581|gb|EGA56388.1| Srp54p [Saccharomyces cerevisiae FostersB]
Length = 452
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 204/438 (46%), Positives = 298/438 (68%), Gaps = 11/438 (2%)
Query: 1 MVLAQLGGSISRAIQQ-MSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKI 59
MVLA LG I+ A+ +SN ++ L I ALL++DV LV +++ NI+
Sbjct: 1 MVLADLGKRINSAVNNAISNTQDDFTTSVDVMLKGIVTALLESDVNIALVSKLRNNIRSQ 60
Query: 60 VNLDDLA----AGHNKRRIIQQAIFNELCKMLD---PGKPSFTPKKGKPSVIMFVGLQGS 112
+ ++ + +++IQ+ +F+ELCK++ + +F PKK K ++IMFVGLQGS
Sbjct: 61 LLSENRSEKSTTNAQTKKLIQKTVFDELCKLVTCEGSEEKAFVPKKRKTNIIMFVGLQGS 120
Query: 113 GKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIA 172
GKTT+CTK A Y+ K+G+K LVCADTFRAGAFDQLKQNA +A+IPFYGSYTE+DP ++A
Sbjct: 121 GKTTSCTKLAVYYSKRGFKVGLVCADTFRAGAFDQLKQNAIRARIPFYGSYTETDPAKVA 180
Query: 173 VEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFD 232
EG+ FKKE D+IIVDTSGRH QE LF+EM ++S + P+ I V+D+SIGQAA
Sbjct: 181 EEGINKFKKEKFDIIIVDTSGRHHQEEELFQEMIEISNV-IKPNQTIMVLDASIGQAAEQ 239
Query: 233 QAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFV 292
Q++AFK+S GA+I+TKMDGHA+GGGA+SAVAAT +P+IFIGTGEH+ + E F K F+
Sbjct: 240 QSKAFKESSDFGAIILTKMDGHARGGGAISAVAATNTPIIFIGTGEHIHDLEKFSPKSFI 299
Query: 293 SRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFS 352
S+LLG+GD +++ V + ++ + +G FTL +Q Q I+KMGP+ +
Sbjct: 300 SKLLGIGDIESLFEQLQTVSNKEDAKATMENIQKGKFTLLDFKKQMQTIMKMGPLSNIAQ 359
Query: 353 MLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGR 411
M+PG S+ + G E+ SQ K+K+ + ++DSMT EEL+S + + +R++R+A+GSG
Sbjct: 360 MIPGMSNMMNQVGEEETSQ-KMKKMVYVLDSMTKEELESDGRMFIEEPTRMVRVAKGSGT 418
Query: 412 QVREVMEMLEEYKRLAKI 429
V EV +L + + +A++
Sbjct: 419 SVFEVEMILMQQQMMARM 436
>gi|149246331|ref|XP_001527635.1| signal recognition particle 54 kDa protein [Lodderomyces
elongisporus NRRL YB-4239]
gi|146447589|gb|EDK41977.1| signal recognition particle 54 kDa protein [Lodderomyces
elongisporus NRRL YB-4239]
Length = 563
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 212/450 (47%), Positives = 301/450 (66%), Gaps = 28/450 (6%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG + A+ + + + E + + +I ALL++D+ KLV +++ NI++ +
Sbjct: 1 MVLADLGERLRGALSSVESGS---EDEIQAMIKDICTALLESDINVKLVAKLRGNIREKI 57
Query: 61 NLDDL---AAGHNKRRIIQQAIFNELCKMLD-------PGKPSFTPK----------KGK 100
L+ + + NKR+ +Q+ IF+ELC ++D P K S T K K
Sbjct: 58 ELEGVLKEQSSQNKRKKLQKIIFDELCALVDSHTEPPKPKKLSSTTKTINGKKVRVSKES 117
Query: 101 PSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFY 160
VIMFVGLQG+GKTT+CTK A Y++K+G+K LVCADTFRAGAFDQLKQNA KA IP+Y
Sbjct: 118 SHVIMFVGLQGAGKTTSCTKLAVYYKKRGFKVGLVCADTFRAGAFDQLKQNAIKANIPYY 177
Query: 161 GSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIF 220
GSY E DPV+IA EGV+ FK E D+IIVDTSGRH+QE LF EM Q+ EA V P I
Sbjct: 178 GSYLEPDPVKIAYEGVQKFKHEKFDIIIVDTSGRHRQEEQLFTEMVQIGEA-VQPTQTIM 236
Query: 221 VMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHM 280
VMD SIGQAA QA+AFK+S G++I+TKMDGHAKGGGA+SAVAATK+P++FIGTGEH+
Sbjct: 237 VMDGSIGQAAESQARAFKESADFGSIILTKMDGHAKGGGAISAVAATKTPIVFIGTGEHV 296
Query: 281 DEFEVFDVKPFVSRLLGMGDWSGFMDKIHEV-VPMDQ-QPELLQKLSEGNFTLRIMYEQF 338
+ E+F FVS+LLG+GD ++ + + + D+ + ++ + EG FTL+ Q
Sbjct: 297 GDLEIFKPTTFVSKLLGIGDIQSLIEHVQSLQLHQDEGHKKTIENIKEGKFTLKDFQTQM 356
Query: 339 QNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMN 398
N +KMGP+ + SM+PG S+ +M + E+E+ KI+ + +MDSMT +EL+S +
Sbjct: 357 NNFMKMGPLTNIASMIPGMSN-IMSQVGEEETSKKIRNMIFIMDSMTTKELESDGRIFIK 415
Query: 399 D-SRIMRIARGSGRQVREVMEMLEEYKRLA 427
+ SRI+R+A+GSG EV +L++++ ++
Sbjct: 416 EPSRIVRVAKGSGCSAVEVEMILQQHRMMS 445
>gi|294657854|ref|XP_460149.2| DEHA2E19404p [Debaryomyces hansenii CBS767]
gi|199432996|emb|CAG88422.2| DEHA2E19404p [Debaryomyces hansenii CBS767]
Length = 541
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 206/457 (45%), Positives = 295/457 (64%), Gaps = 27/457 (5%)
Query: 32 LNEITRALLQADVQFKLVREMQTNIKKIV--NLDDLAAGHNKRRIIQQAIFNELCKMLDP 89
+ +I ALL++DV KLV +++ NIK V ++D + NKR+ +Q+ +F+ELC ++D
Sbjct: 2 IKDICNALLESDVNIKLVAKLRDNIKAKVKTQINDEESSTNKRKKLQKIVFDELCSLVDS 61
Query: 90 GKPSFTPKK--------------------GKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
+ PKK G+ VIMFVGLQG+GKTT+CTK A Y++K+G
Sbjct: 62 HEEPPKPKKLSQQQQKSKTLRGKKATKVTGESHVIMFVGLQGAGKTTSCTKLAVYYKKRG 121
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
+K LVCADTFRAGAFDQLKQNA K+ IP+YGSY E+DPV++A EGV FK+E D+IIV
Sbjct: 122 YKVGLVCADTFRAGAFDQLKQNAIKSSIPYYGSYIETDPVKVAYEGVVKFKQEKFDIIIV 181
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRHKQE +LF EM Q+SE V P I VMD SIGQAA QA+AFK+S G++I+T
Sbjct: 182 DTSGRHKQEQSLFNEMIQISEMIV-PTQTIMVMDGSIGQAAESQAKAFKESSQFGSIILT 240
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
KMDGHA+GGGA+SAVA TK+P++FIGTGEH + E+F F+S+LLG+GD ++ +
Sbjct: 241 KMDGHARGGGAISAVATTKTPIVFIGTGEHATDLEIFKPTSFISKLLGIGDIQSLIEHVQ 300
Query: 310 EVVPMDQQP--ELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGRE 367
+ D + + ++ EG FTLR Q N +KMGP+ + SM+PG S+ +M + E
Sbjct: 301 SLNLQDDESHKKTIENFKEGKFTLRDFQTQMNNFMKMGPLTNIASMIPGMSN-IMSQVGE 359
Query: 368 KESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEMLEEYKRL 426
+E+ +KIK + +MDSMT +ELDS RI+R+ARG+G EV +L++ + +
Sbjct: 360 EETSSKIKNMIYIMDSMTTKELDSDGRIFTQQPERIIRVARGAGCSAVEVEMVLQQQRMM 419
Query: 427 AKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQG 463
+ + K + P+ + + +M++++ Q
Sbjct: 420 SAMAVNAKNMGGPQSAPGAPGAPGAGGNNMARMMQQA 456
>gi|207340327|gb|EDZ68711.1| YPR088Cp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 541
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 204/438 (46%), Positives = 298/438 (68%), Gaps = 11/438 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIID-EKVLNECLNEITRALLQADVQFKLVREMQTNIKKI 59
MVLA LG I+ A+ + T D ++ L I ALL++DV LV +++ NI+
Sbjct: 1 MVLADLGKRINSAVNNAISNTQDDFTTSVDVMLKGIVTALLESDVNIALVSKLRNNIRSQ 60
Query: 60 VNLDDLA----AGHNKRRIIQQAIFNELCKMLD---PGKPSFTPKKGKPSVIMFVGLQGS 112
+ ++ + +++IQ+ +F+ELCK++ + +F PKK K ++IMFVGLQGS
Sbjct: 61 LLSENRSEKSTTNAQTKKLIQKTVFDELCKLVTCEGSEEKAFVPKKRKTNIIMFVGLQGS 120
Query: 113 GKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIA 172
GKTT+CTK A Y+ K+G+K LVCADTFRAGAFDQLKQNA +A+IPFYGSYTE+DP ++A
Sbjct: 121 GKTTSCTKLAVYYSKRGFKVGLVCADTFRAGAFDQLKQNAIRARIPFYGSYTETDPAKVA 180
Query: 173 VEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFD 232
EG+ FKKE D+IIVDTSGRH QE LF+EM ++S + P+ I V+D+SIGQAA
Sbjct: 181 EEGINKFKKEKFDIIIVDTSGRHHQEEELFQEMIEISNV-IKPNQTIMVLDASIGQAAEQ 239
Query: 233 QAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFV 292
Q++AFK+S GA+I+TKMDGHA+GGGA+SAVAAT +P+IFIGTGEH+ + E F K F+
Sbjct: 240 QSKAFKESSDFGAIILTKMDGHARGGGAISAVAATNTPIIFIGTGEHIHDLEKFSPKSFI 299
Query: 293 SRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFS 352
S+LLG+GD +++ V + ++ + +G FTL +Q Q I+KMGP+ +
Sbjct: 300 SKLLGIGDIESLFEQLQTVSNKEDAKATMENIQKGKFTLLDFKKQMQTIMKMGPLSNIAQ 359
Query: 353 MLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGR 411
M+PG S+ + G E+ SQ K+K+ + ++DSMT EEL+S + + +R++R+A+GSG
Sbjct: 360 MIPGMSNMMNQVGEEETSQ-KMKKMVYVLDSMTKEELESDGRMFIEEPTRMVRVAKGSGT 418
Query: 412 QVREVMEMLEEYKRLAKI 429
V EV +L + + +A++
Sbjct: 419 SVFEVEMILMQQQMMARM 436
>gi|6325345|ref|NP_015413.1| Srp54p [Saccharomyces cerevisiae S288c]
gi|1711516|sp|P20424.2|SRP54_YEAST RecName: Full=Signal recognition particle subunit SRP54; AltName:
Full=Signal recognition particle 54 kDa protein homolog
gi|4542|emb|CAA35952.1| signal recognition particle [Saccharomyces cerevisiae]
gi|172705|gb|AAA35092.1| signal recognition particle 54 kDa subunit [Saccharomyces
cerevisiae]
gi|1230693|gb|AAB68136.1| Srp54p: Signal recognition particle 54 kd subunit (Swiss Prot.
accession number P20424) [Saccharomyces cerevisiae]
gi|151942868|gb|EDN61214.1| Signal recognition particle (SRP) subunit [Saccharomyces cerevisiae
YJM789]
gi|256272197|gb|EEU07192.1| Srp54p [Saccharomyces cerevisiae JAY291]
gi|259150240|emb|CAY87043.1| Srp54p [Saccharomyces cerevisiae EC1118]
gi|285815613|tpg|DAA11505.1| TPA: Srp54p [Saccharomyces cerevisiae S288c]
gi|323331335|gb|EGA72753.1| Srp54p [Saccharomyces cerevisiae AWRI796]
gi|323335166|gb|EGA76456.1| Srp54p [Saccharomyces cerevisiae Vin13]
gi|323346316|gb|EGA80606.1| Srp54p [Saccharomyces cerevisiae Lalvin QA23]
gi|323350224|gb|EGA84371.1| Srp54p [Saccharomyces cerevisiae VL3]
gi|349581893|dbj|GAA27050.1| K7_Srp54p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392296095|gb|EIW07198.1| Srp54p [Saccharomyces cerevisiae CEN.PK113-7D]
gi|226740|prf||1604366B signal recognition particle 54kD protein
Length = 541
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 204/438 (46%), Positives = 298/438 (68%), Gaps = 11/438 (2%)
Query: 1 MVLAQLGGSISRAIQQ-MSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKI 59
MVLA LG I+ A+ +SN ++ L I ALL++DV LV +++ NI+
Sbjct: 1 MVLADLGKRINSAVNNAISNTQDDFTTSVDVMLKGIVTALLESDVNIALVSKLRNNIRSQ 60
Query: 60 VNLDDLA----AGHNKRRIIQQAIFNELCKMLD---PGKPSFTPKKGKPSVIMFVGLQGS 112
+ ++ + +++IQ+ +F+ELCK++ + +F PKK K ++IMFVGLQGS
Sbjct: 61 LLSENRSEKSTTNAQTKKLIQKTVFDELCKLVTCEGSEEKAFVPKKRKTNIIMFVGLQGS 120
Query: 113 GKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIA 172
GKTT+CTK A Y+ K+G+K LVCADTFRAGAFDQLKQNA +A+IPFYGSYTE+DP ++A
Sbjct: 121 GKTTSCTKLAVYYSKRGFKVGLVCADTFRAGAFDQLKQNAIRARIPFYGSYTETDPAKVA 180
Query: 173 VEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFD 232
EG+ FKKE D+IIVDTSGRH QE LF+EM ++S + P+ I V+D+SIGQAA
Sbjct: 181 EEGINKFKKEKFDIIIVDTSGRHHQEEELFQEMIEISNV-IKPNQTIMVLDASIGQAAEQ 239
Query: 233 QAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFV 292
Q++AFK+S GA+I+TKMDGHA+GGGA+SAVAAT +P+IFIGTGEH+ + E F K F+
Sbjct: 240 QSKAFKESSDFGAIILTKMDGHARGGGAISAVAATNTPIIFIGTGEHIHDLEKFSPKSFI 299
Query: 293 SRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFS 352
S+LLG+GD +++ V + ++ + +G FTL +Q Q I+KMGP+ +
Sbjct: 300 SKLLGIGDIESLFEQLQTVSNKEDAKATMENIQKGKFTLLDFKKQMQTIMKMGPLSNIAQ 359
Query: 353 MLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGR 411
M+PG S+ + G E+ SQ K+K+ + ++DSMT EEL+S + + +R++R+A+GSG
Sbjct: 360 MIPGMSNMMNQVGEEETSQ-KMKKMVYVLDSMTKEELESDGRMFIEEPTRMVRVAKGSGT 418
Query: 412 QVREVMEMLEEYKRLAKI 429
V EV +L + + +A++
Sbjct: 419 SVFEVEMILMQQQMMARM 436
>gi|323306831|gb|EGA60116.1| Srp54p [Saccharomyces cerevisiae FostersO]
Length = 547
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 204/438 (46%), Positives = 298/438 (68%), Gaps = 11/438 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIID-EKVLNECLNEITRALLQADVQFKLVREMQTNIKKI 59
MVLA LG I+ A+ + T D ++ L I ALL++DV LV +++ NI+
Sbjct: 1 MVLADLGKRINSAVNNAISNTQDDFTTSVDVMLKGIVTALLESDVNIALVSKLRNNIRSQ 60
Query: 60 VNLDDLA----AGHNKRRIIQQAIFNELCKMLD---PGKPSFTPKKGKPSVIMFVGLQGS 112
+ ++ + +++IQ+ +F+ELCK++ + +F PKK K ++IMFVGLQGS
Sbjct: 61 LLSENRSEKSTTNAQTKKLIQKTVFDELCKLVTCEGSEEKAFVPKKRKTNIIMFVGLQGS 120
Query: 113 GKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIA 172
GKTT+CTK A Y+ K+G+K LVCADTFRAGAFDQLKQNA +A+IPFYGSYTE+DP ++A
Sbjct: 121 GKTTSCTKLAVYYSKRGFKVGLVCADTFRAGAFDQLKQNAIRARIPFYGSYTETDPAKVA 180
Query: 173 VEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFD 232
EG+ FKKE D+IIVDTSGRH QE LF+EM ++S + P+ I V+D+SIGQAA
Sbjct: 181 EEGINKFKKEKFDIIIVDTSGRHHQEEELFQEMIEISNV-IKPNQTIMVLDASIGQAAEQ 239
Query: 233 QAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFV 292
Q++AFK+S GA+I+TKMDGHA+GGGA+SAVAAT +P+IFIGTGEH+ + E F K F+
Sbjct: 240 QSKAFKESSDFGAIILTKMDGHARGGGAISAVAATNTPIIFIGTGEHIHDLEKFSPKSFI 299
Query: 293 SRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFS 352
S+LLG+GD +++ V + ++ + +G FTL +Q Q I+KMGP+ +
Sbjct: 300 SKLLGIGDIESLFEQLQTVSNKEDAKATMENIQKGKFTLLDFKKQMQTIMKMGPLSNIAQ 359
Query: 353 MLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGR 411
M+PG S+ + G E+ SQ K+K+ + ++DSMT EEL+S + + +R++R+A+GSG
Sbjct: 360 MIPGMSNMMNQVGEEETSQ-KMKKMVYVLDSMTKEELESDGRMFIEEPTRMVRVAKGSGT 418
Query: 412 QVREVMEMLEEYKRLAKI 429
V EV +L + + +A++
Sbjct: 419 SVFEVEMILMQQQMMARM 436
>gi|449328952|gb|AGE95227.1| signal recognition particle 54kDa subunit [Encephalitozoon
cuniculi]
Length = 466
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 200/474 (42%), Positives = 313/474 (66%), Gaps = 17/474 (3%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
++ +LG SI+ + + ++ D+ + + EI +L+ ++V + V +++ ++ ++
Sbjct: 1 MITELGRSITNTLSNLLSSPATDQHI-ETAIREICNSLILSNVNPRYVSDLRDELRAKLD 59
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
+A G NK R++Q A++ L +LDP S+ +KG+ SV++FVGLQGSGKTT+ KY
Sbjct: 60 PGKMAPGFNKARMVQNAVYERLVDLLDPRTESYKIEKGRTSVVVFVGLQGSGKTTSICKY 119
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKK 181
A +++KKG+K +VCADTFRAGAFDQ++QNA K K+PF+GS +E+DPVR+A GVE F+K
Sbjct: 120 ANFYKKKGYKVGIVCADTFRAGAFDQVRQNALKIKVPFFGS-SEADPVRVASAGVERFRK 178
Query: 182 ENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSV 241
E +LI+VDTSGRH QE LF EM+ + ++P ++FVMD+ IGQ+A DQA FK++V
Sbjct: 179 ERFELILVDTSGRHTQETELFTEMKDIIRE-ISPSSIVFVMDAGIGQSAEDQAMGFKRAV 237
Query: 242 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 301
VG++I+TK+DG K GGA+S+VAATK P+ F+GTGE MD+ E FD + FVSR+LGMGD
Sbjct: 238 DVGSIILTKIDGTTKAGGAISSVAATKCPIEFVGTGEGMDDLEAFDARRFVSRMLGMGDV 297
Query: 302 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 361
G M+K+ + +D++ E+++KL +G FTL Y+QFQ IL +GPI ++ M+PGFS
Sbjct: 298 EGLMEKVGS-LGIDEK-EVVKKLRQGRFTLGDFYDQFQKILSLGPISKLLEMIPGFSGLS 355
Query: 362 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEML 420
+P + K+ + + DS++ ELDS+ + SRIMR+ARGSG V+ V+E+L
Sbjct: 356 LP------DEDTFKKLIYVFDSLSRGELDSTGQVFEKEPSRIMRVARGSGTSVQGVVEIL 409
Query: 421 EEYKRLAKIWSKMKGLK-----IPKKGEMSALSRNMNAQHMSKVLPQGMLKQIG 469
++K+ + K+ + + MS + + +LP+ +L ++G
Sbjct: 410 TQFKKAHAVMQKISSIPGIEGMMGNPSSMSLAQKAKLKEQARNILPKDLLDRMG 463
>gi|4538|emb|CAA34781.1| Srh1p [Saccharomyces cerevisiae]
Length = 541
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 204/438 (46%), Positives = 298/438 (68%), Gaps = 11/438 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIID-EKVLNECLNEITRALLQADVQFKLVREMQTNIKKI 59
MVLA LG I+ A+ + T D ++ L I ALL++DV LV +++ NI+
Sbjct: 1 MVLADLGKRINSAVNNAISNTQDDFTTSVDVMLKGIVTALLESDVNIALVSKLRNNIRSQ 60
Query: 60 VNLDDLA----AGHNKRRIIQQAIFNELCKMLD---PGKPSFTPKKGKPSVIMFVGLQGS 112
+ ++ + +++IQ+ +F+ELCK++ + +F PKK K ++IMFVGLQGS
Sbjct: 61 LLSENRSEKSTTNAQTKKLIQKTVFDELCKLVTCEGSEEKAFVPKKRKTNIIMFVGLQGS 120
Query: 113 GKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIA 172
GKTT+CTK A Y+ K+G+K LVCADTFRAGAFDQLKQNA +A+IPFYGSYTE+DP ++A
Sbjct: 121 GKTTSCTKLAVYYSKEGFKVGLVCADTFRAGAFDQLKQNAIRARIPFYGSYTETDPAKVA 180
Query: 173 VEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFD 232
EG+ FKKE D+IIVDTSGRH QE LF+EM ++S + P+ I V+D+SIGQAA
Sbjct: 181 EEGINKFKKEKFDIIIVDTSGRHHQEEELFQEMIEISNV-IKPNQTIMVLDASIGQAAEQ 239
Query: 233 QAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFV 292
Q++AFK+S GA+I+TKMDGHA+GGGA+SAVAAT +P+IFIGTGEH+ + E F K F+
Sbjct: 240 QSKAFKESSDFGAIILTKMDGHARGGGAISAVAATNTPIIFIGTGEHIHDLEKFSPKSFI 299
Query: 293 SRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFS 352
S+LLG+GD +++ V + ++ + +G FTL +Q Q I+KMGP+ +
Sbjct: 300 SKLLGIGDIESLFEQLQTVSNKEDAKATMENIQKGKFTLLDFKKQMQTIMKMGPLSNIAQ 359
Query: 353 MLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGR 411
M+PG S+ + G E+ SQ K+K+ + ++DSMT EEL+S + + +R++R+A+GSG
Sbjct: 360 MIPGMSNMMNQVGEEETSQ-KMKKMVYVLDSMTKEELESDGRMFIEEPTRMVRVAKGSGT 418
Query: 412 QVREVMEMLEEYKRLAKI 429
V EV +L + + +A++
Sbjct: 419 SVFEVEMILMQQQMMARM 436
>gi|401623147|gb|EJS41254.1| srp54p [Saccharomyces arboricola H-6]
Length = 543
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 206/438 (47%), Positives = 300/438 (68%), Gaps = 11/438 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIID-EKVLNECLNEITRALLQADVQFKLVREMQTNIKKI 59
MVLA LG I+ A+ + T D ++ L I ALL++DV LV +++ NIK
Sbjct: 1 MVLADLGKRINSAVNSAISNTQDDFATSVDVMLKGIVTALLESDVNIALVSKLRNNIKSQ 60
Query: 60 V---NLDDLAAGHNK-RRIIQQAIFNELCKMLD---PGKPSFTPKKGKPSVIMFVGLQGS 112
+ N + A + + +++IQ+ +F+ELCK++ + +F PKK K ++IMFVGLQGS
Sbjct: 61 LLSENRSEKATTNAQTKKLIQKTVFDELCKLVTCEGSEEKAFVPKKRKTNIIMFVGLQGS 120
Query: 113 GKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIA 172
GKTT+CTK A Y+ K+G+K LVCADTFRAGAFDQLKQNA +A+IPFYGSYTE+DP ++A
Sbjct: 121 GKTTSCTKLAVYYSKRGFKVGLVCADTFRAGAFDQLKQNAIRARIPFYGSYTETDPAKVA 180
Query: 173 VEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFD 232
EG+ FKKE D+IIVDTSGRH+QE LF+EM ++S + P+ I V+D+SIGQAA
Sbjct: 181 EEGINKFKKEKFDIIIVDTSGRHRQEEELFQEMIEISNV-IKPNQTIMVLDASIGQAAEQ 239
Query: 233 QAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFV 292
Q++AFK S GA+I+TKMDG A+GGGA+SAVAAT +P+IFIGTGEH+ + E F K F+
Sbjct: 240 QSKAFKDSSDFGAIILTKMDGDARGGGAISAVAATNTPIIFIGTGEHIHDLEKFSPKSFI 299
Query: 293 SRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFS 352
S+LLG+GD +++ V + ++ + +G FTL +Q Q I+KMGP+ +
Sbjct: 300 SKLLGIGDIESLFEQLQTVSNKEDAKATMENIQKGKFTLLDFKKQMQTIMKMGPLSNIAQ 359
Query: 353 MLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGR 411
M+PG S+ + G E+ SQ K+K+ + ++DSMT EEL+S +++ +R++R+A+GSG
Sbjct: 360 MIPGMSNMMNQVGEEETSQ-KMKKMVYVLDSMTREELESDGRMFIDEPTRMVRVAKGSGT 418
Query: 412 QVREVMEMLEEYKRLAKI 429
V EV +L + + +A++
Sbjct: 419 SVFEVEMILMQQQMMARM 436
>gi|19074175|ref|NP_584781.1| SIGNAL RECOGNITION PARTICLE 54kDa SUBUNIT (SRP54) [Encephalitozoon
cuniculi GB-M1]
gi|19068817|emb|CAD25285.1| SIGNAL RECOGNITION PARTICLE 54kDa SUBUNIT (SRP54) [Encephalitozoon
cuniculi GB-M1]
Length = 466
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 199/474 (41%), Positives = 313/474 (66%), Gaps = 17/474 (3%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
++ +LG SI+ + + ++ D+ + + EI +L+ ++V + V +++ ++ ++
Sbjct: 1 MITELGRSITNTLSNLLSSPATDQHI-ETAIREICNSLILSNVNPRYVSDLRDELRAKLD 59
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
+A G NK R++Q A++ L +LDP S+ +KG+ SV++FVGLQGSGKTT+ KY
Sbjct: 60 PGKMAPGFNKARMVQNAVYERLVDLLDPRTESYKIEKGRTSVVVFVGLQGSGKTTSICKY 119
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKK 181
A +++KKG+K +VCADTFRAGAFDQ++QNA K K+PF+GS +E+DPV++A GVE F+K
Sbjct: 120 ANFYKKKGYKVGIVCADTFRAGAFDQVRQNALKIKVPFFGS-SEADPVKVASAGVERFRK 178
Query: 182 ENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSV 241
E +LI+VDTSGRH QE LF EM+ + ++P ++FVMD+ IGQ+A DQA FK++V
Sbjct: 179 ERFELILVDTSGRHTQETELFTEMKDIIRE-ISPSSIVFVMDAGIGQSAEDQAMGFKRAV 237
Query: 242 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 301
VG++I+TK+DG K GGA+S+VAATK P+ F+GTGE MD+ E FD + FVSR+LGMGD
Sbjct: 238 DVGSIILTKIDGTTKAGGAISSVAATKCPIEFVGTGEGMDDLEAFDARRFVSRMLGMGDV 297
Query: 302 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 361
G M+K+ + +D++ E+++KL +G FTL Y+QFQ IL +GPI ++ M+PGFS
Sbjct: 298 EGLMEKVGS-LGIDEK-EVVKKLRQGRFTLGDFYDQFQKILSLGPISKLLEMIPGFSGLS 355
Query: 362 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEML 420
+P + K+ + + DS++ ELDS+ + SRIMR+ARGSG V+ V+E+L
Sbjct: 356 LP------DEDTFKKLIYVFDSLSRGELDSTGQVFEKEPSRIMRVARGSGTSVQGVVEIL 409
Query: 421 EEYKRLAKIWSKMKGLK-----IPKKGEMSALSRNMNAQHMSKVLPQGMLKQIG 469
++K+ + K+ + + MS + + +LP+ +L ++G
Sbjct: 410 TQFKKAHAVMQKISSIPGIEGMMGNPSSMSLAQKAKLKEQARNILPKDLLDRMG 463
>gi|344304252|gb|EGW34501.1| hypothetical protein SPAPADRAFT_134434 [Spathaspora passalidarum
NRRL Y-27907]
Length = 559
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 211/450 (46%), Positives = 302/450 (67%), Gaps = 28/450 (6%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG + A+ + + + D+++ + + +I ALL++DV KLV +++ NI+ +
Sbjct: 1 MVLADLGARLRGALSSVESGS--DDEI-QQMIKDICGALLESDVNIKLVAKLRDNIRSQI 57
Query: 61 ---NLDDLAAGHNKRRIIQQAIFNELCKMLD----PGKP-----SFTPKKGK-------- 100
N+ A+ NKR+ +Q+ I++ELC ++D P KP S KGK
Sbjct: 58 ASSNIAQEASPMNKRKKLQKVIYDELCGLVDSHVEPPKPKKINASTKTIKGKKVKLSKES 117
Query: 101 PSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFY 160
VIMFVGLQG+GKTT+CTK A Y++K+G+ LVCADTFRAGAFDQLKQNA KA IP+Y
Sbjct: 118 SHVIMFVGLQGAGKTTSCTKLAVYYKKRGFTVGLVCADTFRAGAFDQLKQNAIKANIPYY 177
Query: 161 GSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIF 220
GSY E DPV+IA EGV FK+E D+IIVDTSGRH+QE LF EM Q+ +A + P I
Sbjct: 178 GSYLEPDPVKIAFEGVSKFKQEKFDIIIVDTSGRHRQEQQLFTEMVQIGDA-IQPTQTIM 236
Query: 221 VMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHM 280
VMD SIGQAA QA+AFK+S + G++I+TKMDGHAKGGGA+SAVAATK+P++FIGTGEH+
Sbjct: 237 VMDGSIGQAAESQARAFKESSNFGSIILTKMDGHAKGGGAISAVAATKTPIVFIGTGEHI 296
Query: 281 DEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQ--PELLQKLSEGNFTLRIMYEQF 338
+ EVF F+S+LLG+GD ++ + + + + + ++ + EG FTL+ Q
Sbjct: 297 GDLEVFKPTTFISKLLGIGDIQSLIEHVQSLNLQNDEGHKQTIENIKEGKFTLKDFQTQM 356
Query: 339 QNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMN 398
N LKMGP+ + SM+PG + +M + E+E+ KIK + +MDSMT +EL+S ++
Sbjct: 357 NNFLKMGPLTNIASMIPGLGN-IMSQVGEEETSKKIKNMIYIMDSMTQKELESDGRIFID 415
Query: 399 D-SRIMRIARGSGRQVREVMEMLEEYKRLA 427
SRI+R+A+GSG EV +L++++ ++
Sbjct: 416 QPSRIIRLAKGSGCSAIEVEMILQQHRMMS 445
>gi|344245396|gb|EGW01500.1| Signal recognition particle 54 kDa protein [Cricetulus griseus]
Length = 272
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 182/267 (68%), Positives = 226/267 (84%), Gaps = 1/267 (0%)
Query: 32 LNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKMLDPGK 91
L E+ ALL+ADV KLV++++ N+K ++L+++A+G NKR++IQ A+F EL K++DPG
Sbjct: 2 LKEVCTALLEADVNIKLVKQLRENVKSAIDLEEMASGLNKRKMIQHAVFKELVKLVDPGV 61
Query: 92 PSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQN 151
++TP KGK +VIMFVGLQGSGKTTTC+K AYY+Q+KGWK L+CADTFRAGAFDQLKQN
Sbjct: 62 KAWTPTKGKQNVIMFVGLQGSGKTTTCSKLAYYYQRKGWKTCLICADTFRAGAFDQLKQN 121
Query: 152 ATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEA 211
ATKA+IPFYGSYTE DPV IA EGV+ FK EN ++IIVDTSGRHKQE +LFEEM QVS A
Sbjct: 122 ATKARIPFYGSYTEMDPVIIASEGVDKFKNENFEIIIVDTSGRHKQEDSLFEEMLQVSNA 181
Query: 212 TVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPV 271
+ PD +++VMD+SIGQA QA+AFK V V +VIVTK+DGHAKGGGALSAVAATKSP+
Sbjct: 182 -IQPDNIVYVMDASIGQACEAQAKAFKDKVDVASVIVTKLDGHAKGGGALSAVAATKSPI 240
Query: 272 IFIGTGEHMDEFEVFDVKPFVSRLLGM 298
IFIGTGEH+D+FE F +PF+S+LLGM
Sbjct: 241 IFIGTGEHIDDFEPFKTQPFISKLLGM 267
>gi|146416143|ref|XP_001484041.1| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
6260]
Length = 560
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 214/452 (47%), Positives = 297/452 (65%), Gaps = 34/452 (7%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIK--- 57
MVLA+LG + A+ +S+ + E+ + + +I ALL++DV KLV +++ NIK
Sbjct: 15 MVLAELGSRLRDALSGVSSGS---EEEIQAMIKDICTALLESDVNVKLVAKLRDNIKAKV 71
Query: 58 -KIVNLDDLAAGHNKRRIIQQAIFNELCKMLD----PGKPS---------------FTPK 97
K V D+ AA NKR+ +Q+ +F+ELC ++D P KP T
Sbjct: 72 KKEVRNDEAAA--NKRKKLQKIVFDELCALVDSHEEPPKPKKLSQQAKQKSIRGKKITKN 129
Query: 98 KGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKI 157
+ +IMFVGLQG+GKTT+CTK A Y++K+G+K LVCADTFRAGAFDQLKQNATK+ I
Sbjct: 130 NAESHIIMFVGLQGAGKTTSCTKLAVYYKKRGFKVGLVCADTFRAGAFDQLKQNATKSLI 189
Query: 158 PFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDL 217
P+YGSY E+DPV++A EGV F+KE D+IIVDTSGRHKQE +LF+EM Q+SEA V P
Sbjct: 190 PYYGSYLETDPVKVAHEGVVKFRKEKFDIIIVDTSGRHKQEQSLFDEMVQISEA-VQPTQ 248
Query: 218 VIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTG 277
I VMD SIGQAA QA+AFK++ G++I+TKMDGHAKGGGA+SAVAAT++P++FIGTG
Sbjct: 249 TIMVMDGSIGQAAELQARAFKETSDFGSIILTKMDGHAKGGGAISAVAATQTPIVFIGTG 308
Query: 278 EHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQP--ELLQKLSEGNFTLRIMY 335
EH+ + E F F+S+LLG+GD ++ + + D + + ++ EG FTLR
Sbjct: 309 EHVGDLETFRPSAFISKLLGIGDIQSLIEHVQLLNLQDDESHKKTMENFKEGKFTLRDFQ 368
Query: 336 EQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPK 395
Q N KMG + + M+PG S +M + E+E+ +KIK + +MD MT +ELDS
Sbjct: 369 TQMNNFTKMGSLANIALMIPGMSG-IMSQIGEEETSSKIKNMIFIMDLMTTKELDSDGRI 427
Query: 396 LMND-SRIMRIARGSGRQVREVMEMLEEYKRL 426
RI+R+ARG+G EV EM+ + +R+
Sbjct: 428 FTEQPERIIRVARGAGCYAIEV-EMVLQQQRM 458
>gi|303389022|ref|XP_003072744.1| signal recognition particle protein Srp54 [Encephalitozoon
intestinalis ATCC 50506]
gi|303301886|gb|ADM11384.1| signal recognition particle protein Srp54 [Encephalitozoon
intestinalis ATCC 50506]
Length = 466
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 204/475 (42%), Positives = 318/475 (66%), Gaps = 21/475 (4%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
++ +LG SI+ + + + D+ + + EI +L+ ++V + V ++ +K ++
Sbjct: 1 MITELGKSITNTLSNLLRSRATDQDI-EAAIKEICHSLILSNVNPRYVSNLRNELKARLD 59
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
+A G NK R++Q A++ +L +LDP + +KGK S+I+FVGLQGSGKTT+ KY
Sbjct: 60 PSGMAPGLNKARVVQNAVYEKLVDLLDPKAKGYKIEKGKTSIIVFVGLQGSGKTTSICKY 119
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKK 181
A +++KKG+K +VCADTFRAGAFDQ++QNA K K+PF+GS +E+DPV++A GVE F++
Sbjct: 120 ANFYKKKGFKVGIVCADTFRAGAFDQVRQNALKIKVPFFGS-SEADPVKVAGAGVERFRR 178
Query: 182 ENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSV 241
E ++I+VDTSGRH QE+ LF EM+ + V PD ++FVMD+ IGQ+A DQA FK++V
Sbjct: 179 ERFEVILVDTSGRHTQESELFVEMKDIMR-EVRPDSIVFVMDAGIGQSAEDQAIGFKKAV 237
Query: 242 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 301
+VG++I+TK+DG K GGA+S+VAAT P+ F+G GE M++ EVFD + FVSR+LGMGD
Sbjct: 238 NVGSIILTKIDGTNKAGGAISSVAATGCPIEFVGNGEGMEDLEVFDARRFVSRMLGMGDV 297
Query: 302 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 361
G M+K+ E + +D++ E+++KL +G FTL Y+QFQ IL +GPI ++ M+PGFS
Sbjct: 298 EGLMEKV-ESLGIDEK-EVVRKLKQGKFTLGDFYDQFQKILSLGPISKLLEMMPGFSGLS 355
Query: 362 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEML 420
+P ++ES K+ + + DS++ ELDS+ + SRIMR+ARGSG V+ V+E+L
Sbjct: 356 LP---DEES---FKKLIYIFDSLSRGELDSTGQMFEKEPSRIMRVARGSGTSVQGVVEIL 409
Query: 421 EEYKRLAKIWSKMKGLKIPK----KGEMSALSRNMNA---QHMSKVLPQGMLKQI 468
++K+ + K+ IP G S++S A + +LP+ +L ++
Sbjct: 410 TQFKKAHAVMQKIS--SIPGIESMMGNPSSMSLTQKAKLKEQAKNILPKDLLDKM 462
>gi|365762561|gb|EHN04095.1| Srp54p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 510
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 194/406 (47%), Positives = 283/406 (69%), Gaps = 10/406 (2%)
Query: 32 LNEITRALLQADVQFKLVREMQTNIKKIVNLDDLA----AGHNKRRIIQQAIFNELCKML 87
L I ALL++DV LV +++ NI+ + ++ + +++IQ+ +F+ELCK++
Sbjct: 2 LKGIVTALLESDVNIALVSKLRNNIRSQLLSENRSEKSTTNAQTKKLIQKTVFDELCKLV 61
Query: 88 D---PGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGA 144
+ +F PKK K ++IMFVGLQGSGKTT+CTK A Y+ K+G+K LVCADTFRAGA
Sbjct: 62 TCEGSEEKAFVPKKRKTNIIMFVGLQGSGKTTSCTKLAVYYSKRGFKVGLVCADTFRAGA 121
Query: 145 FDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEE 204
FDQLKQNA +A+IPFYGSYTE+DP ++A EG+ FKKE D+IIVDTSGRH QE LF+E
Sbjct: 122 FDQLKQNAIRARIPFYGSYTETDPAKVAEEGINKFKKEKFDIIIVDTSGRHHQEEELFQE 181
Query: 205 MRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAV 264
M ++S + P+ I V+D+SIGQAA Q++AFK+S GA+I+TKMDGHA+GGGA+SAV
Sbjct: 182 MIEISNV-IKPNQTIMVLDASIGQAAEQQSKAFKESSDFGAIILTKMDGHARGGGAISAV 240
Query: 265 AATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKL 324
AAT +P+IFIGTGEH+ + E F K F+S+LLG+GD +++ V + ++ +
Sbjct: 241 AATNTPIIFIGTGEHIHDLEKFSPKSFISKLLGIGDIESLFEQLQTVSNKEDAKATMENI 300
Query: 325 SEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSM 384
+G FTL +Q Q I+KMGP+ + M+PG S+ + G E+ SQ K+K+ + ++DSM
Sbjct: 301 QKGKFTLLDFKKQMQTIMKMGPLSNIAQMIPGMSNMMNQVGEEETSQ-KMKKMVYVLDSM 359
Query: 385 TNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEMLEEYKRLAKI 429
T EEL+S + + +R++R+A+GSG V EV +L + + +A++
Sbjct: 360 TKEELESDGRMFIEEPTRMVRVAKGSGTSVFEVEMILMQQQMMARM 405
>gi|225683542|gb|EEH21826.1| signal recognition particle 54 kDa protein [Paracoccidioides
brasiliensis Pb03]
Length = 500
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 208/409 (50%), Positives = 283/409 (69%), Gaps = 6/409 (1%)
Query: 32 LNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKMLDPGK 91
+ EI ALL ADV +LV+ ++ +IK V L NK+R+IQ+ +F++L ++DP
Sbjct: 2 IKEICAALLSADVNVRLVQSLRKSIKSSVQFSSLPPAVNKKRLIQKTVFDQLVALVDPHC 61
Query: 92 PSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQN 151
F PKKG+ +VIMFVGLQG+GKTTTCTK A ++Q +G++ ALVCADTFRAGAFDQLKQN
Sbjct: 62 EPFKPKKGRSNVIMFVGLQGAGKTTTCTKLARHYQTRGFRAALVCADTFRAGAFDQLKQN 121
Query: 152 ATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEA 211
ATKAKIP+YGS T++DPV +A EGV FKKE D+IIVDTSGRHKQEA LF EM Q+ A
Sbjct: 122 ATKAKIPYYGSLTQTDPVVVAAEGVAKFKKERFDIIIVDTSGRHKQEADLFAEMTQIQTA 181
Query: 212 TVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPV 271
+ PD I V+D +IGQAA Q+ AFK + GA+I+TK DG A GGGA+SAVAAT +P+
Sbjct: 182 -IKPDQTILVLDGTIGQAAEIQSSAFKATADFGAIIITKTDGAAAGGGAISAVAATHTPI 240
Query: 272 IFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQP-ELLQKLSEGNFT 330
IF+GTGEHM + E F KPF+ +LLGMGD +G ++ + V E + ++ G FT
Sbjct: 241 IFLGTGEHMLDLERFAPKPFIQKLLGMGDMAGLVEHVQAVTKDSATAKETYKHITAGIFT 300
Query: 331 LRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQA-KIKRYMTMMDSMTNEEL 389
LR E +I+KMGP+ ++ SM+PG S+ + G + E + K++R + + DSMT EL
Sbjct: 301 LRDFRENITSIMKMGPLSKISSMIPGLSN--ITSGLDDEDGSLKLRRMIYIFDSMTAAEL 358
Query: 390 DSSNPKLMND-SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLK 437
D ++ SRI+R+A GSG VREV ++L ++K +A + ++ G K
Sbjct: 359 DGDGKVFIDQPSRIVRVACGSGTTVREVEDLLSQHKMMAGMAKRVGGQK 407
>gi|57641421|ref|YP_183899.1| signal recognition particle protein Srp54 [Thermococcus
kodakarensis KOD1]
gi|73919452|sp|Q5JJC8.1|SRP54_PYRKO RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|57159745|dbj|BAD85675.1| signal recognition particle, SRP54 subunit [Thermococcus
kodakarensis KOD1]
Length = 448
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 203/442 (45%), Positives = 296/442 (66%), Gaps = 8/442 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L +LG +++ A+++++ ++ +DE + E + +I RALLQADV KLV ++ I+K
Sbjct: 1 MALEKLGQALNSALKKLARSSTVDEATIKEIVRDIQRALLQADVNVKLVLQLTKQIQKRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKML-DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCT 119
++ AG +K+ I + ++ EL K L KP K KP+VI+ VG+QGSGKTT+
Sbjct: 61 LEEEPPAGVSKKEHIIKIVYEELTKFLGTEAKP--LEIKHKPTVILTVGIQGSGKTTSVA 118
Query: 120 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
K A Y QK+G+K +VC+DT+R GA+ QL+Q I +G E D V++A EGVE F
Sbjct: 119 KLARYLQKRGYKVGVVCSDTWRPGAYYQLRQLLDPFGIEVFGDPEEKDAVKLAREGVEHF 178
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQ 239
+++ D+IIVD++GRHK+E L EEMRQ+SEA + P VI V+D +IGQ A++QA AFK+
Sbjct: 179 REKGVDVIIVDSAGRHKEEKGLIEEMRQISEA-IKPHEVILVIDGTIGQQAYNQAMAFKE 237
Query: 240 SVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMG 299
+ +G++IVTK+DG AKGGGALSAVAAT +P+ FIGTGE +D+ E FD K FVSRLLG+G
Sbjct: 238 ATPIGSIIVTKLDGSAKGGGALSAVAATGAPIKFIGTGERIDDLEPFDPKRFVSRLLGLG 297
Query: 300 DWSGFMDKIHEVVPMDQ-QPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFS 358
D G ++KI E+ + + E ++K G F L+ MY Q + + KMGP+ Q+ M+PG
Sbjct: 298 DIQGLLEKIEELQKEQEFREEDMEKFLRGKFNLKDMYAQLEAMQKMGPLKQILQMIPGLG 357
Query: 359 SELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVME 418
L P+ + + K+KRY +MDSMT EEL+ NP+++N SRI RIARGSG EV E
Sbjct: 358 YSL-PEDAVRVGEEKLKRYKVIMDSMTEEELE--NPEIINYSRIKRIARGSGATTAEVRE 414
Query: 419 MLEEYKRLAKIWSKMKGLKIPK 440
+L +Y ++ K++ + K+ K
Sbjct: 415 LLNQYNQMKKMFKSLNKRKLAK 436
>gi|290979105|ref|XP_002672275.1| predicted protein [Naegleria gruberi]
gi|284085850|gb|EFC39531.1| predicted protein [Naegleria gruberi]
Length = 484
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 206/480 (42%), Positives = 320/480 (66%), Gaps = 15/480 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M+L++L +S A+ + + +++D+K +N+ L EI++ALL+ADV + V ++ IK+
Sbjct: 1 MILSELSSQLSNALLTIHSQSVMDDKSVNKFLKEISKALLEADVNCEQVVQVYNGIKE-- 58
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
LD+++ N+++ I++ + ELCK+ DPG + P KGK +VI+F+GL+G+GKTTT +K
Sbjct: 59 ELDNMSQDVNRKKNIKRILKKELCKLFDPGVKAIKPVKGKQNVILFIGLRGAGKTTTASK 118
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
+A +++KKG+K A+V ++TFR GAFD L+ N+ + IPFYG+ E+DP++IA +GVETFK
Sbjct: 119 FAMFYKKKGFKCAIVNSNTFRTGAFDSLRHNSLRDTIPFYGNVFETDPIKIAKDGVETFK 178
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KEN DLIIVDTS R QE +LFEEM+ +SEA + P+ +I VMDS IGQ+ +Q FK
Sbjct: 179 KENYDLIIVDTSARTIQEESLFEEMKLISEA-ITPNDIILVMDSKIGQSIKEQVTTFKSR 237
Query: 241 V-SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMG 299
+ ++G++I+TK+DGH+KGGGALSA+AATK+P+ FIGTGE+ D + F+V+ FVSRLLG G
Sbjct: 238 IPTLGSIILTKLDGHSKGGGALSAIAATKTPISFIGTGEYYDSLQPFEVEGFVSRLLGEG 297
Query: 300 DWSGFMDKIHEVVPMDQQPELLQKLS-EGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFS 358
+++ + + + L L G FT+R + EQ +I+ MGP +V SM+ GFS
Sbjct: 298 NYTILFGAVPQASDSTEISVLNSSLPINGVFTMRDLKEQLLSIVNMGPPSRVLSMIFGFS 357
Query: 359 SELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND--SRIMRIARGSGRQVREV 416
+G+E K+K+Y+T+M SM ELD ++ ++D SRI+RIARGSG+ ++V
Sbjct: 358 EFPKIEGQE----YKVKKYLTIMGSMNETELDCADFTKLSDMQSRILRIARGSGKNSKDV 413
Query: 417 MEMLEEYKRLAKI-WSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQIGGVGGLQ 475
+E+L+ YK+ + K K + RN +H+ G+++Q+G GL
Sbjct: 414 VELLDNYKQFQSTNHPNIIRKKSSKIQDAFNTFRNNELEHLDW---NGIMRQMGTNSGLN 470
>gi|396081243|gb|AFN82861.1| signal recognition particle protein Srp54 [Encephalitozoon romaleae
SJ-2008]
Length = 466
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 199/473 (42%), Positives = 320/473 (67%), Gaps = 17/473 (3%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
++ +LG SI+ + + ++ D+ + + + EI +L+ ++V K V +++ +++ ++
Sbjct: 1 MITELGRSITNTLSNLLSSHTTDQDI-DTAIKEICNSLILSNVNPKYVNDLKNSLRAELD 59
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
+ G NK +++Q A++ L +LDP + +KGK +V++FVGLQGSGKTT+ KY
Sbjct: 60 PKGMPPGFNKAKMVQNAVYERLVDLLDPKTEGYKIEKGKTNVVVFVGLQGSGKTTSICKY 119
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKK 181
A +++KKG+K +VCADTFRAGAFDQ+KQNA K K+PF+GS +E DPV++A GVE F+K
Sbjct: 120 ANFYKKKGYKVGIVCADTFRAGAFDQVKQNALKIKVPFFGS-SEVDPVKVAGAGVERFRK 178
Query: 182 ENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSV 241
E +LI+VDTSGRH QE+ LF EM+ + V P+ ++FVMD+ IGQ+A DQA FK++V
Sbjct: 179 EKFELILVDTSGRHTQESELFLEMKDIIRE-VGPNSIVFVMDAGIGQSAEDQAVGFKRAV 237
Query: 242 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 301
VG++++TK+DG +K GGALS+VAATK P+ F+GTGE M++ E+FD + FVSR+LGMGD
Sbjct: 238 DVGSILLTKIDGTSKAGGALSSVAATKCPIEFVGTGEGMEDLEMFDARRFVSRMLGMGDV 297
Query: 302 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 361
G M+K+ + +D++ E+++KL +G FTL Y+QFQ IL +GPI ++ M+PGFS
Sbjct: 298 EGLMEKVGS-LGIDEK-EVVKKLKQGRFTLGDFYDQFQKILSLGPISKLLEMIPGFSGLS 355
Query: 362 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEML 420
+P ++ES K+ + + DSM+ ELDS+ + +R++R+ARGSG V+ V E+L
Sbjct: 356 LP---DEES---FKKLIYVFDSMSRGELDSTGQIFEREPTRVVRVARGSGTSVQGVTEIL 409
Query: 421 EEYKRLAKIWSKMKGLKIPKK--GEMSALSRNMNA---QHMSKVLPQGMLKQI 468
++K++ + K + + G S++S + A + +LP+ +L ++
Sbjct: 410 SQFKKVHAMMQKFSSIPGIENMMGNPSSISLSQKAKLKEQAKNILPKDLLDRM 462
>gi|123420898|ref|XP_001305857.1| SRP54-type protein [Trichomonas vaginalis G3]
gi|121887399|gb|EAX92927.1| SRP54-type protein, putative [Trichomonas vaginalis G3]
Length = 490
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 202/489 (41%), Positives = 320/489 (65%), Gaps = 16/489 (3%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L LG + +I+++S + IDE V + EI+++L+ ADV ++V +++ +N
Sbjct: 1 MLQDLGDKLIGSIKKLSESKKIDETVYRNFMIEISKSLIAADVSKEIVFSFSKRLREKIN 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
+++ G + +R+I++A+FNEL +++PG ++ P K K ++ M VGLQG+GKTTT TK
Sbjct: 61 FNEIPPGLSAKRVIEKAVFNELVTLINPGMTAYKPIKKKLNIFMMVGLQGAGKTTTVTKL 120
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKK 181
A Y++++ WK ++ ADTFRAGA +QL QNA A+IP++ +TESDPV++A++G++ FKK
Sbjct: 121 ANYYKRRNWKTGVIAADTFRAGAREQLMQNAQTARIPYFVDFTESDPVQVALKGIDKFKK 180
Query: 182 ENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSV 241
E ++ I+DTSGRH QE ALF EM+ ++E V PD +IFVMD +IGQAA+DQA FK +V
Sbjct: 181 EKFEIAIIDTSGRHMQEEALFAEMKSLAENVV-PDEIIFVMDGTIGQAAYDQALGFKNAV 239
Query: 242 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 301
VG++I+TK+D +AKGGGALSAVAAT+SP+ FIG+GE+ + E FD FVSRLLG+ D
Sbjct: 240 GVGSIIITKLDSNAKGGGALSAVAATQSPISFIGSGENFTDLEWFDPSSFVSRLLGIADP 299
Query: 302 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIG---QVFSMLPGFS 358
+ F + E + D+ E+ Q + G F + +Y Q+Q IL++G + S+ G++
Sbjct: 300 TIFQRTLEE-IDKDRNREIGQHILAGQFNFKDLYAQYQTILEVGNFNSMMESISIANGYA 358
Query: 359 SELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLM-NDSRIMRIARGSGRQVREVM 417
KG + ++ +++R + +D+M+ EL+ NP L +DSR MR+A GSG V
Sbjct: 359 PG--TKGNPEATKEQVRRILITIDAMSTSELE--NPSLFKDDSRKMRVASGSGMPPTFVQ 414
Query: 418 EMLEEYKRLAKIWSKM--KGLKIPKKGEMSALS--RNMNAQ--HMSKVLPQGMLKQIGGV 471
+++E KR K++ +M K L + + EM + R Q M+K + + ML+ +GG+
Sbjct: 415 YVIDEQKRWEKMFKRMDKKTLALMAQEEMPTFANERQFKEQVLKMAKSMDKDMLRSVGGI 474
Query: 472 GGLQNLMKQ 480
GL+ M+Q
Sbjct: 475 EGLEASMRQ 483
>gi|409095092|ref|ZP_11215116.1| signal recognition particle protein Srp54 [Thermococcus zilligii
AN1]
Length = 449
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 206/475 (43%), Positives = 303/475 (63%), Gaps = 29/475 (6%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L +LG +++ A+++++ A IDE ++ E + +I RAL+Q+DV +LV ++ I++
Sbjct: 1 MALERLGKALNSALRKLARAGTIDEALIKEVVRDIQRALIQSDVNVRLVLQLTRRIEERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ AG + R + + ++ EL +L KK KP+V++ VG+QGSGKTTT K
Sbjct: 61 LKEKPPAGMSPREHVIRIVYEELTDLLGKEAVPLEIKK-KPTVLLTVGIQGSGKTTTIAK 119
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A Y QK+G++ LVC DT+R GA+ QLKQ I +G+ E D +++A EGVE FK
Sbjct: 120 LARYLQKRGYRVGLVCTDTWRPGAYSQLKQLVEPLGIGVFGNPEEKDAIKLAREGVEYFK 179
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
+ D+IIVDT+GRHK+EA L EEM+Q+S A + PD VI V+D +IGQ A++QA AFK++
Sbjct: 180 DKGVDVIIVDTAGRHKEEAGLIEEMKQISSA-IQPDEVILVIDGTIGQQAYNQALAFKEA 238
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
+G++IVTK+DG AKGGGALSAVAAT +P+ FIGTGE +D+ E FD K FVSRLLG+GD
Sbjct: 239 TPIGSIIVTKLDGSAKGGGALSAVAATGAPIKFIGTGEKIDDLEPFDPKRFVSRLLGLGD 298
Query: 301 WSGFMDKIHEVVPMDQ-QPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSS 359
++K E+ + + E L+K +G F L+ MY Q + + KMGP+ +V M+PG
Sbjct: 299 IESLLEKFEELTQEQEIREEDLEKFLKGKFNLKDMYAQLEAMQKMGPLQKVLQMIPGLGY 358
Query: 360 ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEM 419
L P + + K+KRY +MDSMT EEL+ NP ++N SRI RIARGSG +EV E+
Sbjct: 359 SL-PDEAIRVGEEKLKRYRVIMDSMTEEELE--NPDIINYSRIKRIARGSGTSTKEVKEL 415
Query: 420 LEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQIGGVGGL 474
L +Y ++ K++ +N++ + ++K M K GG+GGL
Sbjct: 416 LAQYNQMRKMF------------------KNLDKRKLAK-----MAKNFGGLGGL 447
>gi|226287163|gb|EEH42676.1| signal recognition particle 54 kDa protein [Paracoccidioides
brasiliensis Pb18]
Length = 530
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 211/440 (47%), Positives = 289/440 (65%), Gaps = 6/440 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ ++ IDE+ + + EI A F K V
Sbjct: 1 MVLQDLGRRINAAVNDLTRSSNIDEQAFDAMIKEICAASSPPTSTFASSSLSANPSKSSV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
L NK+R+IQ+ +F++L ++DP F PKKG+ +VIMFVGLQG+GKTTTCTK
Sbjct: 61 QFSSLPPAVNKKRLIQKTVFDQLVALVDPHCEPFKPKKGRSNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G++ ALVCADTFRAGAFDQLKQNATKAKIP+YGS T++DPV +A EGV FK
Sbjct: 121 LARHYQTRGFRAALVCADTFRAGAFDQLKQNATKAKIPYYGSLTQTDPVVVAAEGVAKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KE D+IIVDTSGRHKQEA LF EM Q+ A + PD I V+D +IGQAA Q+ AFK +
Sbjct: 181 KERFDIIIVDTSGRHKQEADLFAEMTQIQTA-IKPDQTILVLDGTIGQAAEIQSSAFKAT 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
GA+I+TK DG A GGGA+SAVAAT +P+IF+GTGEHM + E F KPF+ +LLGMGD
Sbjct: 240 ADFGAIIITKTDGAAAGGGAISAVAATHTPIIFLGTGEHMLDLERFAPKPFIQKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQP-ELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSS 359
+G ++ + V E + ++ G FTLR E +I+KMGP+ ++ SM+PG S+
Sbjct: 300 MAGLVEHVQAVTKDSATAKETYKHITAGIFTLRDFRENITSIMKMGPLSKISSMIPGLSN 359
Query: 360 ELMPKGREKESQA-KIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVM 417
+ G + E + K++R + + DSMT ELD ++ SRI+R+A GSG VREV
Sbjct: 360 --ITSGLDDEDGSLKLRRMIYIFDSMTAAELDGDGKVFIDQPSRIVRVACGSGTTVREVE 417
Query: 418 EMLEEYKRLAKIWSKMKGLK 437
++L ++K +A + ++ G K
Sbjct: 418 DLLSQHKMMAGMAKRVGGQK 437
>gi|389852998|ref|YP_006355232.1| signal recognition particle protein Srp54 [Pyrococcus sp. ST04]
gi|388250304|gb|AFK23157.1| signal recognition particle protein Srp54 [Pyrococcus sp. ST04]
Length = 443
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 199/439 (45%), Positives = 292/439 (66%), Gaps = 16/439 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG ++S A+++++ A +DE ++ E + +I RAL+QADV +LV ++ I++
Sbjct: 1 MVLDTLGKALSNALKKIARAGSVDEALIKEVVRDIQRALIQADVNVRLVLKLTKEIQRRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKML-DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCT 119
+ AG +++ I + ++ EL K+L +P + KP++++ VG+QGSGKTTT
Sbjct: 61 LEEKPPAGISRKEHIIKIVYEELTKLLGTEARP--IEIRAKPTILLMVGIQGSGKTTTVA 118
Query: 120 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
K A Y QK+G+K +VC+DT+R GA+ QLKQ I +G E D +++A EGVE F
Sbjct: 119 KLARYFQKRGYKVGVVCSDTWRPGAYHQLKQLLDPYHIEVFGDPKEKDAIKLAKEGVEHF 178
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQ 239
K + DLIIVDT+GRHK+E L EEMRQ+SEA +NP VI V+D +IGQ A++QA AFK+
Sbjct: 179 KSKGVDLIIVDTAGRHKEEKDLIEEMRQISEA-INPHEVILVIDGTIGQQAYNQALAFKE 237
Query: 240 SVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMG 299
+ +G++IVTK+DG AKGGGALSAVAAT +P+ FIG GE +D+ E FD FVSRLLG+G
Sbjct: 238 ATPIGSIIVTKLDGSAKGGGALSAVAATGAPIKFIGVGEKIDDLEPFDPARFVSRLLGLG 297
Query: 300 DWSGFMDKIHEV-VPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFS 358
D G ++K EV ++ E +++ +G FTL+ MY Q + + KMGP+ Q+ M+PG
Sbjct: 298 DIQGLLEKFKEVEKEIELSEEDVERFLKGKFTLKDMYAQLEAMRKMGPLKQILRMIPGLG 357
Query: 359 ----SELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVR 414
EL+ G E +++++ +MDSMT EEL NP ++N SRI RIARGSG +R
Sbjct: 358 YSLPDELISVGEE-----RLRKFKVIMDSMTEEEL--MNPDIINYSRIKRIARGSGTSIR 410
Query: 415 EVMEMLEEYKRLAKIWSKM 433
+V E+L +YK++ K + M
Sbjct: 411 DVRELLNQYKQMKKFFKSM 429
>gi|333911098|ref|YP_004484831.1| Signal recognition 54 kDa protein [Methanotorris igneus Kol 5]
gi|333751687|gb|AEF96766.1| Signal recognition 54 kDa protein [Methanotorris igneus Kol 5]
Length = 451
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 207/445 (46%), Positives = 294/445 (66%), Gaps = 13/445 (2%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L +LG SI++A+ ++ NAT +D+K++ E + +I +AL+QADV KLV +M I+K
Sbjct: 1 MLEKLGESINKALNKIKNATFVDKKLVKEVIKDIQKALIQADVNVKLVLQMSKTIEKRAI 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKML--DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCT 119
+ G +K+ I + ++ EL K+L +P PKK +VI+ VG+QGSGKTTT
Sbjct: 61 EETPPKGFSKKEHIIKIVYEELVKLLGEEPKPLELNPKK--QTVILLVGIQGSGKTTTAA 118
Query: 120 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTES-DPVRIAVEGVET 178
K A Y QK+G KPAL+ ADT+R A++QLKQ A K +P YG T + P+ IA EG+E
Sbjct: 119 KLARYIQKRGLKPALIAADTYRPAAYEQLKQLAEKIHVPLYGDETRTKSPIDIAKEGLEK 178
Query: 179 FKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFK 238
FKK D+II+DT+GRHK+E L EEM+ + E T NPD +I V+D ++GQ A +QA+AFK
Sbjct: 179 FKK--ADVIIIDTAGRHKEEKGLLEEMKMMKEIT-NPDEIILVIDGTLGQQARNQAKAFK 235
Query: 239 QSV-SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLG 297
+V +G++IVTK+DG AKGGGALSAVA K+P+ FIGTGE +D+ E FD K F+SRLLG
Sbjct: 236 DAVGDIGSIIVTKLDGSAKGGGALSAVAEIKAPIKFIGTGEGIDDLEPFDPKKFISRLLG 295
Query: 298 MGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGF 357
MGD ++K E+V ++ E + + G FTL +Y Q + I KMGPI Q+ +M+PGF
Sbjct: 296 MGDLDSLLEKADELVD-EKTEESIDAILRGKFTLNELYAQLEAINKMGPIKQIMNMIPGF 354
Query: 358 SSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVM 417
+ L PK + ++ K+K+Y +MDSMT EE NP+++ SRI RIARG+G + EV
Sbjct: 355 GAGL-PKEVVQITEQKLKKYRIIMDSMTKEE--KENPEIIKASRIERIARGAGVKPEEVK 411
Query: 418 EMLEEYKRLAKIWSKMKGLKIPKKG 442
E+L Y + +K K+ K G
Sbjct: 412 ELLRYYATTKRAIENLKRGKMLKMG 436
>gi|374635569|ref|ZP_09707165.1| GTP-binding signal recognition particle SRP54 G-domain protein
[Methanotorris formicicus Mc-S-70]
gi|373561871|gb|EHP88096.1| GTP-binding signal recognition particle SRP54 G-domain protein
[Methanotorris formicicus Mc-S-70]
Length = 451
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 207/445 (46%), Positives = 292/445 (65%), Gaps = 13/445 (2%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L +LG SI++A+ ++ NA +D+K++ E + +I +AL+QADV KLV +M I+K
Sbjct: 1 MLEKLGESINKALNKIKNAAFVDKKLIKEVIKDIQKALIQADVNVKLVLQMSKTIEKRAI 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKML--DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCT 119
+ G +K+ I + ++ EL K+L + K PKK +VI+ VG+QGSGKTTT
Sbjct: 61 EETPPKGFSKKEHIIKIVYEELVKLLGEEAKKLELNPKK--QTVILLVGIQGSGKTTTAA 118
Query: 120 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTES-DPVRIAVEGVET 178
K A Y QK+G KPAL+ ADT+R A++QLKQ A K +P YG T + PV IA EG+E
Sbjct: 119 KLARYIQKRGLKPALIAADTYRPAAYEQLKQLAEKIHVPLYGDETRTKSPVDIAKEGLEK 178
Query: 179 FKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFK 238
FKK D++I+DT+GRHK+E L EEM+ + E T NPD +I V+D ++GQ A +QA+AFK
Sbjct: 179 FKK--VDVLIIDTAGRHKEEKGLLEEMKMMKEIT-NPDEIILVIDGTLGQQARNQAKAFK 235
Query: 239 QSV-SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLG 297
+V +G++IVTK+DG AKGGGALSAVA +P+ FIGTGE +D+ EVFD K F+SRLLG
Sbjct: 236 DAVGDIGSIIVTKLDGSAKGGGALSAVAEINAPIKFIGTGEGIDDLEVFDPKKFISRLLG 295
Query: 298 MGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGF 357
MGD ++K E+V ++ E + + G FTL +Y Q + I KMGPI Q+ SM+PG
Sbjct: 296 MGDLDTLLEKADELVD-EKTEESIDAILRGKFTLNELYAQLEAINKMGPIKQIMSMIPGL 354
Query: 358 SSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVM 417
L PK + ++ K+K+Y +MDSMT EE NP+++ SRI RIARG+G + EV
Sbjct: 355 GGGL-PKEAAQVTEQKLKKYRIIMDSMTKEE--KENPEIIKASRIQRIARGAGVKQEEVK 411
Query: 418 EMLEEYKRLAKIWSKMKGLKIPKKG 442
E+L+ Y K +K K+ K G
Sbjct: 412 ELLKYYATTKKAVENLKRGKMLKMG 436
>gi|300706383|ref|XP_002995462.1| hypothetical protein NCER_101628 [Nosema ceranae BRL01]
gi|239604578|gb|EEQ81791.1| hypothetical protein NCER_101628 [Nosema ceranae BRL01]
Length = 466
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 208/479 (43%), Positives = 316/479 (65%), Gaps = 25/479 (5%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
++ LG SI+ ++ ++ ++ I D+ + +++I +L+ ++V LV +++ N+ + +
Sbjct: 1 MITDLGKSITASLSRLFSSNITDDSI-KYIIDDICTSLINSNVNPMLVEKIRNNLNEKI- 58
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
L + G NK+++I+ A+FNEL ++DP S +KGK +V++FVGLQG+GKTT+ KY
Sbjct: 59 LSENIQGFNKQKVIETAVFNELVSLVDPKIKSKELEKGKSNVVVFVGLQGAGKTTSICKY 118
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKK 181
A Y++KKG K ALVCADTFRAGAF+Q+KQNA K K+PFYGS E+DPV +A+EGV FKK
Sbjct: 119 ANYYKKKGLKVALVCADTFRAGAFEQIKQNAMKIKVPFYGS-EEADPVVVALEGVSRFKK 177
Query: 182 ENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSV 241
E+ DLI VDTSGRH QE LF EM + A V PD +IFVMD+ IGQ+A DQA FK +V
Sbjct: 178 EDFDLICVDTSGRHTQEKDLFTEMTDIINA-VTPDNIIFVMDAGIGQSAEDQALGFKNAV 236
Query: 242 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 301
+VG++I++K+DG K GGA+S+VA+ + P++F+GTGE+M++FEVF+ K FV R+LGMGD
Sbjct: 237 NVGSIIISKIDGTVKAGGAISSVASIQCPILFVGTGENMEDFEVFEPKGFVGRMLGMGDL 296
Query: 302 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 361
G KI + + +D++ EL K +G FTL QF+ +L +GP+ ++ MLPG S+
Sbjct: 297 HGLSRKISD-LKIDEK-ELFNKFQKGTFTLNDFSVQFKQLLSLGPMTKLLEMLPGTSNFQ 354
Query: 362 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKL-MNDSRIMRIARGSGRQVREVMEML 420
MP + K K+ + ++DS++ EL+S + +SRI+RIA+GS +EV ++L
Sbjct: 355 MP------DEKKFKKLICILDSLSKSELNSDGLIIEKENSRILRIAKGSASTPQEVYDLL 408
Query: 421 EEY-------KRLAKI--WSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQIGG 470
++ KR A I +S + G K P G +S + Q +LP+ +L + G
Sbjct: 409 VQFRNMSNMMKRFANIPGYSDLIG-KDP--GSLSESQKAKFKQQAKGMLPKDLLDSMNG 464
>gi|308162746|gb|EFO65124.1| SRP GTPase [Giardia lamblia P15]
Length = 530
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 208/504 (41%), Positives = 312/504 (61%), Gaps = 27/504 (5%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIK-KI 59
MVL +LG S+ I + + + + +N ++E L ADV + + M+ ++ KI
Sbjct: 1 MVLNELGSSVLNVITKFAKTRLTTNEAVNALVDEFIGVLEAADVPARTLEPMRKSMTTKI 60
Query: 60 VNLDDLAAGH-NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTC 118
++ + G N +++Q+ + EL ML P +P F P + + +VIMFVGLQG+GKTTTC
Sbjct: 61 LSDPAIMEGRANTHQVVQRIVVQELVSMLSPERPPFRPVRNRANVIMFVGLQGAGKTTTC 120
Query: 119 TKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVET 178
K+ Y+++KGW+ LVC DTFR GAFDQLKQN T ++PFYGSY+E DPV+IA +GV+
Sbjct: 121 VKFGAYYKRKGWRVGLVCCDTFRTGAFDQLKQNCTAVRLPFYGSYSEKDPVQIAQDGVKH 180
Query: 179 FKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFK 238
F N +LII+DTSGRH+QE ALF EM+ + A V P +FV+DSSIGQAA++QA AF
Sbjct: 181 FIGLNFELIILDTSGRHRQEEALFTEMKLIDSA-VQPHDHVFVLDSSIGQAAYEQADAFS 239
Query: 239 QSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGM 298
+V +G+VI+TK+DGH++GGGAL+AV+ATK+P++F+GTGE +++ E FD FVS +LG
Sbjct: 240 NAVEIGSVILTKLDGHSRGGGALAAVSATKAPIVFLGTGEKIEDLEFFDSSRFVSVMLGY 299
Query: 299 GDWSGFMDKIHEVVP---MDQQPEL--LQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSM 353
GD G +HE + +D + + + ++ +F+ R EQ +N+ KMGP+ ++ SM
Sbjct: 300 GDIVG----LHEAMQGGNIDHKAHIQTVVRMLHNHFSFRDFKEQLKNLNKMGPLQKIASM 355
Query: 354 LPGFSSELMPKGREKESQAK-IKRYMTMMDSMTNEELDSSNPKLMND------SRIMRIA 406
+PGFS + +S+ K ++ + T+MDSM +ELDS+ L + SR+ RIA
Sbjct: 356 VPGFSQMAASGDIDMDSEVKHLQIFNTIMDSMAAKELDSNTELLRKEGEDKFRSRVKRIA 415
Query: 407 RGSGRQVREVMEMLEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLK 466
GSG V EV+E ++ ++I+ KM G K+ + L +M +
Sbjct: 416 IGSGHTVDEVLEFFDKATEFSEIFGKM-GRKMKSPAALQELFSSMKMNPQMMQ------Q 468
Query: 467 QIGGVGGLQNLMKQMGSTKDMMGM 490
+ G+G LQN M +M MGM
Sbjct: 469 MMSGLGSLQN-MSEMADIAKSMGM 491
>gi|159117703|ref|XP_001709071.1| SRP GTPase [Giardia lamblia ATCC 50803]
gi|157437186|gb|EDO81397.1| SRP GTPase [Giardia lamblia ATCC 50803]
Length = 530
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 207/504 (41%), Positives = 312/504 (61%), Gaps = 27/504 (5%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIK-KI 59
MVL +LG ++ I + + + + +N ++E L ADV + + M+ ++ KI
Sbjct: 1 MVLNELGSNVLNVITKFAKTRLTTNEAVNALVDEFIGVLEAADVPARTLEPMRKSMTTKI 60
Query: 60 VNLDDLAAGH-NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTC 118
++ + G N +++Q+ + EL ML P +P F P + + +VIMFVGLQG+GKTTTC
Sbjct: 61 LSDPAIMEGRANTHQVVQRIVVQELVSMLSPERPPFRPVRNRANVIMFVGLQGAGKTTTC 120
Query: 119 TKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVET 178
K+ Y+++KGW+ LVC DTFR GAFDQLKQN T K+PFYGSY+E DPV+IA +GV+
Sbjct: 121 VKFGAYYKRKGWRVGLVCCDTFRTGAFDQLKQNCTAVKLPFYGSYSEKDPVQIAQDGVKH 180
Query: 179 FKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFK 238
F N +LII+DTSGRH+QE ALF EM+ + A V P +FV+DSSIGQAA++QA AF
Sbjct: 181 FVSLNFELIILDTSGRHRQEEALFTEMKLIDSA-VQPHDHVFVLDSSIGQAAYEQADAFS 239
Query: 239 QSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGM 298
+V +G+VI+TK+DGH++GGGAL+AV+ATK+P++F+GTGE +++ E FD FVS +LG
Sbjct: 240 NAVEIGSVILTKLDGHSRGGGALAAVSATKAPIVFLGTGEKIEDLEFFDPSRFVSVMLGY 299
Query: 299 GDWSGFMDKIHEVVP---MDQQPEL--LQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSM 353
GD G +HE + +D + + + ++ +F+ R EQ +N+ KMGP+ ++ SM
Sbjct: 300 GDIVG----LHEAMQGGNIDHKAHIQTVVRMLHNHFSFRDFKEQLKNLNKMGPLQKIASM 355
Query: 354 LPGFSSELMPKGREKESQAK-IKRYMTMMDSMTNEELDSSNPKLMND------SRIMRIA 406
+PGFS + +S+ K ++ + T+MDSM +ELDS+ L + SR+ RIA
Sbjct: 356 VPGFSQMAASGDIDMDSEVKHLQIFNTIMDSMAAKELDSNTELLKKEGEDKFRSRVRRIA 415
Query: 407 RGSGRQVREVMEMLEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLK 466
GSG + EV+E ++ ++I+ KM G K+ + L +M +
Sbjct: 416 IGSGHTIEEVLEFFDKATEFSEIFGKM-GRKMKSPAALQELFSSMKMNPQMMQ------Q 468
Query: 467 QIGGVGGLQNLMKQMGSTKDMMGM 490
+ G+G LQN M +M MGM
Sbjct: 469 MMNGLGSLQN-MSEMADIAKSMGM 491
>gi|123974885|ref|XP_001314049.1| SRP54-type protein [Trichomonas vaginalis G3]
gi|121896072|gb|EAY01234.1| SRP54-type protein, putative [Trichomonas vaginalis G3]
Length = 482
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 205/486 (42%), Positives = 311/486 (63%), Gaps = 15/486 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I + + A+ +D++ + + ++T AL ADV +V + + I
Sbjct: 1 MVLQDLGEKILAGLSNLGKASKVDDEFVKQYAKDMTNALKAADVSGPIVLQFFKQLISI- 59
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ DL G + ++ I++ L ++DP ++ P KGKP+V MFVGLQGSGKTTTCTK
Sbjct: 60 KVSDLPPGVSIKKHIERETLRLLVDLVDPKVDAYKPTKGKPNVYMFVGLQGSGKTTTCTK 119
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
Y++K+G+K LV ADTFRAGA +QL QNA +P+Y DP+ +A+ GVE FK
Sbjct: 120 LGLYYKKRGFKVGLVGADTFRAGAREQLMQNAQSVGLPYYVDLVNIDPISVAISGVEKFK 179
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
+E D+IIVDTSG+H QE ALF+EM+++ +A +NPD +IFV+D++IGQ+AFDQA AF ++
Sbjct: 180 RERYDMIIVDTSGKHAQENALFQEMQEMQDA-INPDEIIFVLDANIGQSAFDQATAFSKA 238
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V +G++I+TK+D KGGGA+SAVAATK P+ F GTGE MD+ E+FD F++ +LG D
Sbjct: 239 VDIGSIIMTKLDSGTKGGGAISAVAATKCPIAFYGTGEEMDQLEIFDPNSFIANILGYAD 298
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
M K+ EVV MD+Q EL Q++ +G + R MYEQ++ IL MG I + + + G S
Sbjct: 299 PKALMHKL-EVVDMDKQAELAQRIMKGQYGFREMYEQYKTILDMGDITGIINAV-GMKS- 355
Query: 361 LMPKGREKES-QAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVME 418
L+PKG + + +K+Y+ ++DSM+++E+D +P L + +RI+RI+RG+G + +
Sbjct: 356 LLPKGFSNDDMTSTLKKYLVIIDSMSDKEMD--DPSLFKEKNRIVRISRGTGMKTEMIEM 413
Query: 419 MLEEYKRLAKIW-----SKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQIGGVGG 473
+++E K A+ + +KM + G+MS AQ M+K + G+ KQ+ G
Sbjct: 414 VIKEQKNFAQAFKAFSKNKMFSNMLQNSGKMSQNEMMQAAQQMAKNINPGLAKQLKS-GN 472
Query: 474 LQNLMK 479
NL+K
Sbjct: 473 FGNLLK 478
>gi|240104007|ref|YP_002960316.1| signal recognition particle protein Srp54 [Thermococcus
gammatolerans EJ3]
gi|259511389|sp|C5A233.1|SRP54_THEGJ RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|239911561|gb|ACS34452.1| Signal recognition particle, subunit SRP54 (srp54) [Thermococcus
gammatolerans EJ3]
Length = 448
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 196/442 (44%), Positives = 294/442 (66%), Gaps = 8/442 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L +LG +++ A+++++ ++ +DE ++ E + +I RAL+Q+DV +LV ++ I++
Sbjct: 1 MALEKLGKALNSALRKLARSSTVDEALIREVVRDIQRALIQSDVNVRLVLQLTKRIQERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPK-KGKPSVIMFVGLQGSGKTTTCT 119
+ AG + R + + ++ EL K+L GK + + + KP++++ VG+QGSGKTTT
Sbjct: 61 LNEKPPAGVSPREHVIKIVYEELTKLL--GKEAVPLEIREKPTILLTVGIQGSGKTTTIA 118
Query: 120 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
K A + QK+G+K LVC DT+R GA+ QLKQ I +G E D +++A EGVE F
Sbjct: 119 KLARHLQKRGYKVGLVCTDTWRPGAYYQLKQLVEPYNIEVFGDPGEKDAIKLAREGVEYF 178
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQ 239
K + D+IIVDT+GRHK+E+ L EEM+Q+SEA + P VI V+D +IGQ A+ QA AFK+
Sbjct: 179 KDKGVDVIIVDTAGRHKEESGLIEEMKQISEA-IKPHEVILVIDGTIGQQAYHQALAFKE 237
Query: 240 SVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMG 299
+ +G++IVTK+DG AKGGGALSAVAAT +P+ FIG GE +D+ E FD K FVSRLLG+G
Sbjct: 238 ATPIGSIIVTKLDGSAKGGGALSAVAATGAPIKFIGVGEKIDDLEPFDPKRFVSRLLGLG 297
Query: 300 DWSGFMDKIHEVVPMDQ-QPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFS 358
D G ++KI E+ + + E ++K G F L+ MY Q + + KMGP+ Q+ M+PG
Sbjct: 298 DIQGLLEKIEELQKEQEFKEEDVEKFLRGKFNLKDMYAQLEAMQKMGPLKQILQMIPGLG 357
Query: 359 SELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVME 418
L P + + K++RY +MDSMT EEL+ NP ++N SRI RIARGSG REV E
Sbjct: 358 YSL-PDEAVRVGEEKLRRYRIIMDSMTEEELE--NPDIINYSRIKRIARGSGTSTREVRE 414
Query: 419 MLEEYKRLAKIWSKMKGLKIPK 440
+L +Y ++ K++ + K+ K
Sbjct: 415 LLAQYNQMRKMFKNLDKRKLAK 436
>gi|315230023|ref|YP_004070459.1| signal recognition particle [Thermococcus barophilus MP]
gi|315183051|gb|ADT83236.1| signal recognition particle [Thermococcus barophilus MP]
Length = 448
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 196/435 (45%), Positives = 288/435 (66%), Gaps = 8/435 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L LG +++ A+++++ A +DE ++ E + +I RAL+ +DV KLV ++ I+K
Sbjct: 1 MALESLGKALNAALKKLARAGSVDEVLIKEVVRDIQRALIMSDVNVKLVLDLTKKIQKRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKML-DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCT 119
+ AG ++R I + ++ EL L KP K KP++++ VG+QGSGKTTT
Sbjct: 61 LEEKPPAGVSRREHIIKIVYEELTNFLGKEAKP--IEIKEKPTILLTVGIQGSGKTTTVA 118
Query: 120 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
K A Y QK+G+K LVC+DT+R GA+ QLKQ I +G E D VR+A EGVE F
Sbjct: 119 KLARYFQKRGYKVGLVCSDTWRPGAYHQLKQLVEPYSIEVFGDPNEKDAVRLAKEGVEYF 178
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQ 239
K + D+IIVD++GRHK+E +L EEM+Q+S+A +NP VI V+D +IGQ A+ QA AFK+
Sbjct: 179 KHKGVDIIIVDSAGRHKEEKSLIEEMKQISDA-INPHEVILVIDGTIGQQAYSQALAFKE 237
Query: 240 SVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMG 299
+ +G++IVTK+DG AKGGGALSAV AT +P+ FIG GE +D+ E FD K FVSRLLG+G
Sbjct: 238 ATPIGSIIVTKLDGSAKGGGALSAVVATGAPIKFIGVGERIDDLEPFDPKRFVSRLLGLG 297
Query: 300 DWSGFMDKIHEVVPMDQ-QPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFS 358
D G ++K E+ + + E L+K G F L+ MY Q + + KMGP+ Q+ M+PG
Sbjct: 298 DIQGLLEKFEELSKAQELKEEDLEKFMRGKFNLKDMYAQLEAMSKMGPLKQILQMIPGLG 357
Query: 359 SELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVME 418
L P + S+ +++++ +MDSMT EEL+ +P+++N SRI RIARGSG V++V E
Sbjct: 358 YSL-PDDVVRVSEQRLRKFKVIMDSMTEEELE--HPEIINYSRIKRIARGSGTTVKDVKE 414
Query: 419 MLEEYKRLAKIWSKM 433
+LE+Y ++ K + M
Sbjct: 415 LLEQYNQMKKFFKSM 429
>gi|223477851|ref|YP_002582335.1| Signal recognition 54kDa protein [Thermococcus sp. AM4]
gi|214033077|gb|EEB73905.1| Signal recognition 54kDa protein [Thermococcus sp. AM4]
Length = 448
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 195/442 (44%), Positives = 294/442 (66%), Gaps = 8/442 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L +LG +++ A+++++ ++ +DE ++ E + +I RAL+Q+DV +LV ++ I++
Sbjct: 1 MALEKLGKALNSALRKLARSSTVDEALIREVVRDIQRALIQSDVNVRLVLQLTKRIQERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPK-KGKPSVIMFVGLQGSGKTTTCT 119
+ AG + R + + ++ EL K L GK + + + KP++++ VG+QGSGKTTT
Sbjct: 61 LNEKPPAGVSPREHVVKIVYEELTKFL--GKEAVPLEIREKPTILLTVGIQGSGKTTTIA 118
Query: 120 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
K A + QK+G+K LVC DT+R GA+ QLKQ I +G E D +++A EGVE F
Sbjct: 119 KLARHLQKRGYKVGLVCTDTWRPGAYYQLKQLVEPYNIEVFGDPNEKDAIKLAREGVEHF 178
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQ 239
+++ D+IIVDT+GRHK+E+ L EEM+Q+SEA + P VI V+D +IGQ A+ QA AFK+
Sbjct: 179 REKGVDVIIVDTAGRHKEESGLIEEMKQISEA-IKPHEVILVIDGTIGQQAYHQALAFKE 237
Query: 240 SVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMG 299
+ +G++IVTK+DG AKGGGALSAVAAT +P+ FIG GE +D+ E FD K FVSRLLG+G
Sbjct: 238 ATPIGSIIVTKLDGSAKGGGALSAVAATGAPIKFIGVGEKIDDLEPFDPKRFVSRLLGLG 297
Query: 300 DWSGFMDKIHEVVPMDQ-QPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFS 358
D G ++KI E+ + + E ++K G F L+ MY Q + + KMGP+ Q+ M+PG
Sbjct: 298 DIQGLLEKIEELQKEQEFKEEDVEKFLRGKFNLKDMYAQLEAMQKMGPLKQILQMIPGLG 357
Query: 359 SELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVME 418
L P + + K++RY +MDSMT EEL+ NP ++N SRI RIARGSG REV E
Sbjct: 358 YSL-PDDAIRVGEEKLRRYRIIMDSMTEEELE--NPDIINYSRIKRIARGSGTSTREVRE 414
Query: 419 MLEEYKRLAKIWSKMKGLKIPK 440
+L +Y ++ K++ + K+ K
Sbjct: 415 LLAQYNQMRKMFKNLDKRKLAK 436
>gi|212223269|ref|YP_002306505.1| signal recognition particle protein Srp54 [Thermococcus onnurineus
NA1]
gi|229558607|sp|B6YSS1.1|SRP54_THEON RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|212008226|gb|ACJ15608.1| signal recognition particle, SRP54 subunit [Thermococcus onnurineus
NA1]
Length = 448
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 196/454 (43%), Positives = 300/454 (66%), Gaps = 14/454 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L +LG +++ A+++++ ++ +DE + E + +I RAL+QADV +LV ++ I+K
Sbjct: 1 MALEKLGKALNNALRKLARSSTVDEATIKEVVRDIQRALIQADVNVRLVLDLTKRIEKRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKML-DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCT 119
++ G +K+ I + ++ EL K L KP K KP+V++ VG+QGSGKTT+
Sbjct: 61 LEEEPPTGVSKKEHIIKIVYEELTKFLGTEAKP--IEIKEKPTVLLTVGIQGSGKTTSIA 118
Query: 120 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
K A Y QK+G+K LVC+DT+R GA+ QLKQ I +G E D +++A EGVE F
Sbjct: 119 KLARYFQKRGYKVGLVCSDTWRPGAYQQLKQLVEPFGIEVFGDPEEKDAIKLAKEGVEHF 178
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQ 239
+++ D+IIVD++GRHK+E +L EEM+Q+S A + P VI V+D +IGQ A++QA AFK+
Sbjct: 179 REKGVDIIIVDSAGRHKEEKSLIEEMKQIS-AAIKPHEVILVIDGTIGQQAYNQALAFKE 237
Query: 240 SVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMG 299
+ +G++IVTK+DG AKGGGALSAVAAT +P+ FIG GE +D+ E FD K FVSRLLG+G
Sbjct: 238 ATPIGSIIVTKLDGSAKGGGALSAVAATGAPIKFIGVGERIDDLEPFDPKRFVSRLLGLG 297
Query: 300 DWSGFMDKIHEVVPMDQ-QPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFS 358
D G ++K E+ + + E L+K +G F L+ MY Q + + KMGP+ Q+ M+PG
Sbjct: 298 DIQGLLEKFEELQKQQEFREEDLEKFLKGKFNLKDMYAQLEAMQKMGPLKQILQMIPGMG 357
Query: 359 SELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVME 418
L P + + ++K++ +MDSMT EEL+ +P+++N SRI RIARGSG ++EV E
Sbjct: 358 YSL-PDDAVRVGEERLKKFKVIMDSMTEEELE--HPEIINYSRIKRIARGSGTSIQEVRE 414
Query: 419 MLEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMN 452
+L +Y ++ K++ M K ++S ++R N
Sbjct: 415 LLHQYNQMKKMFKSM------DKRKLSKMARKFN 442
>gi|164658964|ref|XP_001730607.1| hypothetical protein MGL_2403 [Malassezia globosa CBS 7966]
gi|159104503|gb|EDP43393.1| hypothetical protein MGL_2403 [Malassezia globosa CBS 7966]
Length = 617
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 230/558 (41%), Positives = 324/558 (58%), Gaps = 76/558 (13%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG +++A + +D +++ L ++ ALL +DV +LV++++ ++K V
Sbjct: 1 MVLADLGRRLNQAFSDLQRQPTLDAASVDQLLKDVCSALLASDVNVRLVQKLRQDVKDEV 60
Query: 61 N--LDDLAAGHN-----KRRIIQQAIFNELCKMLDPGKPSFTPK--KGKPSVIMFVGLQG 111
+ L+D + ++ +Q+ +F+ L K++DPG S + KG+ VIMFVGLQG
Sbjct: 61 SSLLNDKGKAESYTDAQRKHQVQRIVFDYLVKLVDPGDGSTKHRLDKGQQHVIMFVGLQG 120
Query: 112 SGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRI 171
SGKTT+CTK A ++QK+G++ LVCADTFRAGAFDQLKQNA KA+IPFYGSYTE+DPV I
Sbjct: 121 SGKTTSCTKLALWYQKRGYRTGLVCADTFRAGAFDQLKQNAAKARIPFYGSYTETDPVAI 180
Query: 172 AVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAF 231
A GV +FKK D+IIVDTSGRHKQE LF EM +S A V P I V+D+SIGQAA
Sbjct: 181 ASAGVTSFKKNRFDVIIVDTSGRHKQEKDLFAEMVDISRA-VKPSQTIMVLDASIGQAAE 239
Query: 232 DQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPF 291
Q +AFK++ GA+ VTK+DGHAKGGGA+SAVA+T++P+IFIGTGEH+ + E F +PF
Sbjct: 240 AQCRAFKEAADFGAMFVTKLDGHAKGGGAISAVASTQTPIIFIGTGEHVHDLEPFRARPF 299
Query: 292 VSRLLGMGDWSGFMDKIHEVV----PMDQQPELLQKLSE-GNFTLRIMYEQFQNILKMGP 346
+S+LLG+GD +G MDK+ EV +Q ++++K+ E G FT+R EQ +I MGP
Sbjct: 300 ISKLLGLGDLTGLMDKMEEVHMNEDVQQRQRDMMKKIQEGGTFTIRDWREQITHIQSMGP 359
Query: 347 IGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDS--------------- 391
+ ++ M+PG S + + + K K + + DSMT EELDS
Sbjct: 360 MSKMAGMIPGMSQMMGHAPSDATANDKFKIMLYITDSMTPEELDSDGSCFTKPIKTSTSR 419
Query: 392 -----------------------------SNPKLMNDSRIMRIARGSGRQVREVMEMLEE 422
S L SR +R+ARGSG VR+V E L +
Sbjct: 420 AAAARSHSDEKAQSRTAANTNANANDKTKSKAPLRLTSRALRVARGSGTSVRDVEEFLMQ 479
Query: 423 YKRLAKIWSKMKG--------------LKIPKKGEMSALSRNMN---AQHMSKVLPQGML 465
Y+ ++++ K G +G M L M A M LP +
Sbjct: 480 YRTISQMVKKFGGKNSWLQQMKSGGGSGAGAGRGGMPMLPPGMTREQAMKMQNALPADIK 539
Query: 466 KQIGGVGGLQNLMKQMGS 483
Q+ GG + LM+Q+ S
Sbjct: 540 AQLRQPGGREQLMRQLQS 557
>gi|375083524|ref|ZP_09730543.1| signal recognition particle protein Srp54 [Thermococcus litoralis
DSM 5473]
gi|375083969|ref|ZP_09730981.1| signal recognition particle protein Srp54 [Thermococcus litoralis
DSM 5473]
gi|374741396|gb|EHR77822.1| signal recognition particle protein Srp54 [Thermococcus litoralis
DSM 5473]
gi|374741717|gb|EHR78136.1| signal recognition particle protein Srp54 [Thermococcus litoralis
DSM 5473]
Length = 448
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 199/442 (45%), Positives = 291/442 (65%), Gaps = 8/442 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL +LG S++ A+++++ A+ +DE ++ E + +I RALL +DV +LV ++ I+K
Sbjct: 1 MVLDKLGQSLNNALRKLARASTVDEALVREVVRDIQRALLTSDVNVRLVLDLTKKIEKRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKML-DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCT 119
+ AG +K+ I + ++ EL L KP K KP++++ VG+QGSGKTT+
Sbjct: 61 LEEKPPAGVSKKEHIIKIVYEELTSFLGKEAKP--IEIKEKPTILLTVGIQGSGKTTSVA 118
Query: 120 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
K A Y QK G+K LVC+DT+R GA+ QLKQ I +G E D V++A EGVE F
Sbjct: 119 KLARYFQKHGYKVGLVCSDTWRPGAYFQLKQLVEPYGIEVFGDPEEKDAVKLAKEGVEYF 178
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQ 239
KK+ D+IIVD++GRHK+E L EEM+Q+S A +NP VI V+D +IGQ A++QA AFK+
Sbjct: 179 KKKGVDVIIVDSAGRHKEEKGLIEEMKQISNA-INPHEVILVIDGTIGQQAYNQALAFKE 237
Query: 240 SVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMG 299
+ +G++IVTK+DG AKGGGALSAV AT +P+ FIG GE +D+ E FD K FVSRLLG+G
Sbjct: 238 ATPIGSIIVTKLDGSAKGGGALSAVVATGAPIKFIGVGEKIDDLEPFDPKRFVSRLLGLG 297
Query: 300 DWSGFMDKIHEVVPMDQ-QPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFS 358
D G ++K E+ + E ++K G F L+ MY Q + + KMGP+ Q+ M+PG
Sbjct: 298 DIQGLLEKFEELSKETEFTEEDVEKFLRGKFNLKDMYAQLEAMRKMGPLQQILKMIPGMG 357
Query: 359 SELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVME 418
+ P K S+ ++K++ +MDSMT EEL+ NP+++N SRI RIARGSG ++V E
Sbjct: 358 YSI-PDEVIKVSEERLKKFKVIMDSMTEEELE--NPEIINYSRIKRIARGSGTSTKDVKE 414
Query: 419 MLEEYKRLAKIWSKMKGLKIPK 440
+L +YK++ K + M K+ K
Sbjct: 415 LLNQYKQMKKFFKGMDKRKLAK 436
>gi|189206976|ref|XP_001939822.1| signal recognition particle 54 kDa protein [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187975915|gb|EDU42541.1| signal recognition particle 54 kDa protein [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 489
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 202/405 (49%), Positives = 286/405 (70%), Gaps = 27/405 (6%)
Query: 32 LNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKMLDPGK 91
+ EI+ AL++ADV KLV ++ +IK+ V+ LA G NK+R+IQ+A+F+EL KM+DP
Sbjct: 2 VKEISNALVEADVNVKLVMNLRQSIKRTVDFKHLAPGVNKKRLIQKAVFDELVKMVDPHA 61
Query: 92 PSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQN 151
F P+KGK +VIMFVGLQG+GKTTTCTK A ++Q +G+K LVCADTFRAGAFDQLKQN
Sbjct: 62 EPFKPRKGKSNVIMFVGLQGAGKTTTCTKLARWYQARGFKACLVCADTFRAGAFDQLKQN 121
Query: 152 ATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEA 211
ATKAKIP+YGS+T++DPV +A EGVE FKKE ++IIVDTSGRH+QE LF+EM
Sbjct: 122 ATKAKIPYYGSHTQTDPVVVAGEGVEKFKKERFEIIIVDTSGRHRQEKDLFDEM------ 175
Query: 212 TVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPV 271
AA QA+AFK++ GA+I+TK DG A GGGA+SAVAAT +P+
Sbjct: 176 -----------------AAESQARAFKEAADFGAIIITKTDGAAAGGGAISAVAATHTPI 218
Query: 272 IFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTL 331
+F+G GEHM + E F + FVS+LLGMGD G ++ + + + +DQ+ + ++ +++G FT+
Sbjct: 219 VFLGNGEHMLDLERFAPQAFVSKLLGMGDVQGLVEHV-QSLKLDQK-DTMKHITQGIFTI 276
Query: 332 RIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDS 391
+ + +Q NI+KMGP+ ++ M+PG S +M ++E K+KR + + DSMT +EL+S
Sbjct: 277 KDLRDQLSNIMKMGPLSKMAGMIPGLGS-MMGGMDDEEGGMKLKRMIYICDSMTEKELES 335
Query: 392 SNPKLMND-SRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKG 435
++ +R+ RIARGSG VREV E+L +++ +A + KMKG
Sbjct: 336 DGKMFVDQPTRMTRIARGSGTSVREVEELLTQHRMMAGMAKKMKG 380
>gi|15594157|dbj|BAB64926.1| signal recognition particle protein 54 [Pyrococcus furiosus]
Length = 443
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 194/452 (42%), Positives = 300/452 (66%), Gaps = 14/452 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG +++ +++++ A+ +DE ++ E + +I RAL+QADV +LV ++ I++
Sbjct: 1 MVLDNLGKALANTLKKIARASSVDEALIKELVRDIQRALIQADVNVRLVLQLTREIQRRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKML-DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCT 119
+ AG +K+ I + ++ EL K L KP K KP++++ VG+QGSGKTTT
Sbjct: 61 LEEKPPAGISKKEHIIKIVYEELTKFLGTEAKP--IEIKEKPTILLMVGIQGSGKTTTVA 118
Query: 120 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
K A Y QK+G+K +VC+DT+R GA+ QL+Q + I +G+ E D +++A EGV+ F
Sbjct: 119 KLARYFQKRGYKVGVVCSDTWRPGAYHQLRQVLDRYHIEVFGNPQEKDAIKLAKEGVDYF 178
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQ 239
K + D+IIVDT+GRHK++ AL EEM+Q+S ++P VI V+D +IGQ A++QA AFK+
Sbjct: 179 KSKGVDIIIVDTAGRHKEDKALIEEMKQISN-VIHPHEVILVIDGTIGQQAYNQALAFKE 237
Query: 240 SVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMG 299
+ +G++IVTK+DG AKGGGALSAVAAT +P+ FIGTGE +D+ E FD FVSRLLG+G
Sbjct: 238 ATPIGSIIVTKLDGSAKGGGALSAVAATGAPIKFIGTGEKIDDIEPFDPPRFVSRLLGLG 297
Query: 300 DWSGFMDKIHEV-VPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFS 358
D G ++K E+ ++ + E +++ G FTL+ MY Q + + KMGP+ Q+ M+PG
Sbjct: 298 DIQGLLEKFKELEKEVEIKEEDIERFLRGKFTLKDMYAQLEAMRKMGPLKQILRMIPGLG 357
Query: 359 SELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVME 418
L P + ++K++ +MDSMT EEL NP+++N SRI RIARGSG ++V E
Sbjct: 358 YSL-PDDVISIGEERLKKFKVIMDSMTEEEL--LNPEIINYSRIKRIARGSGTSTKDVKE 414
Query: 419 MLEEYKRLAKIWSKMKGLKIPKKGEMSALSRN 450
+L++Y+++ K++ M K ++S L+R
Sbjct: 415 LLDQYRQMKKLFKSM------NKRQLSRLARR 440
>gi|18978103|ref|NP_579460.1| signal recognition particle protein Srp54 [Pyrococcus furiosus DSM
3638]
gi|397652622|ref|YP_006493203.1| signal recognition particle protein Srp54 [Pyrococcus furiosus
COM1]
gi|23822176|sp|Q8U070.1|SRP54_PYRFU RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|211939182|pdb|3DM5|A Chain A, Structures Of Srp54 And Srp19, The Two Proteins Assembling
The Ribonucleic Core Of The Signal Recognition Particle
From The Archaeon Pyrococcus Furiosus.
gi|211939183|pdb|3DM5|B Chain B, Structures Of Srp54 And Srp19, The Two Proteins Assembling
The Ribonucleic Core Of The Signal Recognition Particle
From The Archaeon Pyrococcus Furiosus.
gi|18893898|gb|AAL81855.1| signal recognition particle protein srp54 [Pyrococcus furiosus DSM
3638]
gi|393190213|gb|AFN04911.1| signal recognition particle protein Srp54 [Pyrococcus furiosus
COM1]
Length = 443
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 194/452 (42%), Positives = 300/452 (66%), Gaps = 14/452 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG +++ +++++ A+ +DE ++ E + +I RAL+QADV +LV ++ I++
Sbjct: 1 MVLDNLGKALANTLKKIARASSVDEALIKELVRDIQRALIQADVNVRLVLQLTREIQRRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKML-DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCT 119
+ AG +K+ I + ++ EL K L KP K KP++++ VG+QGSGKTTT
Sbjct: 61 LEEKPPAGISKKEHIIKIVYEELTKFLGTEAKP--IEIKEKPTILLMVGIQGSGKTTTVA 118
Query: 120 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
K A Y QK+G+K +VC+DT+R GA+ QL+Q + I +G+ E D +++A EGV+ F
Sbjct: 119 KLARYFQKRGYKVGVVCSDTWRPGAYHQLRQLLDRYHIEVFGNPQEKDAIKLAKEGVDYF 178
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQ 239
K + D+IIVDT+GRHK++ AL EEM+Q+S ++P VI V+D +IGQ A++QA AFK+
Sbjct: 179 KSKGVDIIIVDTAGRHKEDKALIEEMKQISN-VIHPHEVILVIDGTIGQQAYNQALAFKE 237
Query: 240 SVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMG 299
+ +G++IVTK+DG AKGGGALSAVAAT +P+ FIGTGE +D+ E FD FVSRLLG+G
Sbjct: 238 ATPIGSIIVTKLDGSAKGGGALSAVAATGAPIKFIGTGEKIDDIEPFDPPRFVSRLLGLG 297
Query: 300 DWSGFMDKIHEV-VPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFS 358
D G ++K E+ ++ + E +++ G FTL+ MY Q + + KMGP+ Q+ M+PG
Sbjct: 298 DIQGLLEKFKELEKEVEIKEEDIERFLRGKFTLKDMYAQLEAMRKMGPLKQILRMIPGLG 357
Query: 359 SELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVME 418
L P + ++K++ +MDSMT EEL NP+++N SRI RIARGSG ++V E
Sbjct: 358 YSL-PDDVISIGEERLKKFKVIMDSMTEEEL--LNPEIINYSRIKRIARGSGTSTKDVKE 414
Query: 419 MLEEYKRLAKIWSKMKGLKIPKKGEMSALSRN 450
+L++Y+++ K++ M K ++S L+R
Sbjct: 415 LLDQYRQMKKLFKSM------NKRQLSRLARR 440
>gi|154285458|ref|XP_001543524.1| hypothetical protein HCAG_00570 [Ajellomyces capsulatus NAm1]
gi|150407165|gb|EDN02706.1| hypothetical protein HCAG_00570 [Ajellomyces capsulatus NAm1]
Length = 353
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 181/350 (51%), Positives = 242/350 (69%), Gaps = 2/350 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ + +D + + + EI ALL ADV +LV+ ++ +IK V
Sbjct: 1 MVLQDLGRRINAAVNDLTRSNNVDAQAFDAMIKEICAALLSADVNVRLVQSLRKSIKAAV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
L NK+R+IQ+ +F++L ++DP F PKKG+ +VIMFVGLQG+GKTTTCTK
Sbjct: 61 PFSSLPPAVNKKRLIQKTVFDQLVALVDPHAEPFKPKKGRSNVIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G++ ALVCADTFRAGAFDQLKQNATKAKIP++GS T++DP +A EGV FK
Sbjct: 121 LARHYQTRGFRAALVCADTFRAGAFDQLKQNATKAKIPYFGSLTQTDPAVVAAEGVAKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KE D+IIVDTSGRHKQE LF EM Q+ A + PD I V+D +IGQAA Q+ AFK +
Sbjct: 181 KERFDIIIVDTSGRHKQEEDLFVEMTQIQTA-IQPDQTILVLDGTIGQAAESQSAAFKAA 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
GA+I+TK DG+A GGGA+SAVAAT +P+IF+GTGEHM + E F KPF+ +LLGMGD
Sbjct: 240 ADFGAIIITKTDGNAAGGGAISAVAATHTPIIFLGTGEHMLDLERFSPKPFIQKLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQP-ELLQKLSEGNFTLRIMYEQFQNILKMGPIGQ 349
+ ++ + V E + +S G FTLR E +I+KMGP+ Q
Sbjct: 300 MASLVEHVQAVTKDSATAKETYKHISAGIFTLRDFRENITSIMKMGPLYQ 349
>gi|242399400|ref|YP_002994824.1| Signal recognition 54 kDa protein [Thermococcus sibiricus MM 739]
gi|242265793|gb|ACS90475.1| Signal recognition 54 kDa protein [Thermococcus sibiricus MM 739]
Length = 453
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 192/442 (43%), Positives = 294/442 (66%), Gaps = 8/442 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL +LG S++ A+++++ A+ +DE ++ + + +I RAL+ +DV +LV ++ I+K
Sbjct: 6 MVLDKLGQSLNNALKKLARASTVDEALVRDVVRDIQRALITSDVNVRLVLDLTKKIEKRA 65
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKML-DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCT 119
+ AG +K+ I + ++ EL L KP K KP+V++ VG+QGSGKTT+
Sbjct: 66 LEEKPPAGVSKKEHIVKIVYEELTNFLGKEAKP--VEIKAKPTVLLTVGIQGSGKTTSVA 123
Query: 120 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
K + Y QK G+K +VC+DT+R GA+ QLKQ I +G+ E + +++A EGVE F
Sbjct: 124 KLSRYFQKHGYKVGVVCSDTWRPGAYQQLKQLIEPYGIEVFGNPEEKNAIKLAKEGVEYF 183
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQ 239
KK+ D+IIVD++GRHK+E L EEMRQ+S T+NP VI ++D +IGQ A++QA AFK+
Sbjct: 184 KKKGVDVIIVDSAGRHKEEKGLIEEMRQISN-TINPHEVILIIDGTIGQQAYNQALAFKE 242
Query: 240 SVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMG 299
+ +G++IVTK+DG AKGGGALSAV AT +P+ FIG GE +D+ E FD K FVSRLLG+G
Sbjct: 243 ATPIGSIIVTKLDGSAKGGGALSAVVATGAPIKFIGVGEKIDDLEPFDPKRFVSRLLGLG 302
Query: 300 DWSGFMDKIHEVV-PMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFS 358
D G ++K E+ ++ + E ++K +G F L+ MY Q + + KMGP+ Q+ M+PG
Sbjct: 303 DIQGLLEKFEELSKEVEFKEEDMEKFLKGKFNLKDMYAQLEAMKKMGPLQQILKMIPGMG 362
Query: 359 SELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVME 418
L P + S+ ++K++ +MDSMT EEL+ NP+++N SRI RIARGSG ++V E
Sbjct: 363 YSL-PDEMVRMSEVRLKKFKVIMDSMTEEELE--NPEIINYSRIKRIARGSGTTTKDVKE 419
Query: 419 MLEEYKRLAKIWSKMKGLKIPK 440
++ +Y ++ K + M K+ K
Sbjct: 420 LINQYNQMKKFFRSMDKRKLAK 441
>gi|341582011|ref|YP_004762503.1| signal recognition particle protein Srp54 [Thermococcus sp. 4557]
gi|340809669|gb|AEK72826.1| signal recognition particle protein Srp54 [Thermococcus sp. 4557]
Length = 448
Score = 368 bits (945), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 201/442 (45%), Positives = 294/442 (66%), Gaps = 8/442 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L +LG +++ A+++++ + +DE + E + +I RAL+QADV +LV ++ I+K
Sbjct: 1 MALEKLGKALNSALKKLARSKTVDEATIKEVVRDIQRALIQADVNVRLVLQLTKTIEKRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPK-KGKPSVIMFVGLQGSGKTTTCT 119
++ AG +K+ I Q ++ EL K L GK S + K KP+V++ VG+QGSGKTT+
Sbjct: 61 LEEEPPAGASKKEHIIQIVYEELTKFL--GKESKPLEIKEKPTVLLTVGIQGSGKTTSVA 118
Query: 120 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
K A + QK+G+K +VC+DT+R GA+ QLKQ I G E D V++A EGVE F
Sbjct: 119 KLARHLQKRGYKVGVVCSDTWRPGAYYQLKQLLEPYGIEVSGDPEEKDAVKLAYEGVEYF 178
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQ 239
K ++ D+IIVD++GRHK+E+ L EEM+Q+S+A + P VI V+D +IGQ A++QA AFK+
Sbjct: 179 KGKDVDVIIVDSAGRHKEESGLIEEMKQISQA-IKPHEVILVIDGTIGQQAYNQALAFKE 237
Query: 240 SVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMG 299
+ +G++IVTK+DG AKGGGALSAVAAT +P+ FIG GE +D+ E FD K FVSRLLGMG
Sbjct: 238 ATPIGSIIVTKLDGSAKGGGALSAVAATGAPIKFIGVGERIDDLEAFDPKRFVSRLLGMG 297
Query: 300 DWSGFMDKIHEVVPMDQ-QPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFS 358
D G ++K+ E+ E L+K +G F L+ MY Q + + KMGP+ QV M+PG
Sbjct: 298 DIEGLLEKLEELQKQQAVSEEDLEKFLKGKFNLKDMYAQLEAMQKMGPLKQVLQMIPGLG 357
Query: 359 SELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVME 418
L P + + K++RY +MDSMT EEL+ +P+++N SRI RIARGSG EV E
Sbjct: 358 YSL-PDDAVRVGEEKLRRYRVIMDSMTEEELE--HPEIINYSRIKRIARGSGTSTAEVRE 414
Query: 419 MLEEYKRLAKIWSKMKGLKIPK 440
+L +Y ++ K++ M K+ K
Sbjct: 415 LLNQYNQMKKMFKSMDKRKLAK 436
>gi|150399615|ref|YP_001323382.1| signal recognition particle protein Srp54 [Methanococcus vannielii
SB]
gi|166222337|sp|A6UQJ8.1|SRP54_METVS RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|150012318|gb|ABR54770.1| GTP-binding signal recognition particle SRP54 G- domain protein
[Methanococcus vannielii SB]
Length = 450
Score = 368 bits (945), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 199/446 (44%), Positives = 292/446 (65%), Gaps = 15/446 (3%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L +LG ++S A+ ++ NAT +D+K++ E + +I +AL+Q+DV KLV M I++
Sbjct: 1 MLDKLGQNLSEALNKIKNATFVDKKLVKEVIKDIQKALIQSDVNVKLVFNMSKEIERKAI 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKML--DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCT 119
+ G +K+ I + +++EL K+L +P K P K SVI+ VG+QGSGKTT+
Sbjct: 61 EEAPPKGFSKKEHIIKIVYDELVKLLGENPQKLELDP--SKKSVILLVGIQGSGKTTSSA 118
Query: 120 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESD-PVRIAVEGVET 178
K A Y QKKG KPAL+ AD +R A+ QLKQ + K +P +G T++ PV I EG+E
Sbjct: 119 KLARYIQKKGMKPALIAADIYRPAAYQQLKQLSEKINVPLFGDETKTKTPVEIVKEGIEK 178
Query: 179 FKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFK 238
KK D++I+DT+GRHK+E +L EEM+Q+ E T NP+ +I V+D ++GQ A +QA+AFK
Sbjct: 179 LKK--SDVLIIDTAGRHKEEESLLEEMKQMKEIT-NPNEIILVIDGTLGQQAKNQAKAFK 235
Query: 239 QSVS-VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLG 297
+VS +G+++VTK+DG AKGGGALSAVA +P+ FIGTGE +D E FD K F+SRLLG
Sbjct: 236 DAVSEIGSILVTKLDGSAKGGGALSAVAEINAPIKFIGTGEGVDNLETFDPKKFISRLLG 295
Query: 298 MGDWSGFMDKIHEVVPMDQQP-ELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPG 356
MGD ++K +V MD+ E + + +G FTL +Y Q + I KMGP+ Q+ M+PG
Sbjct: 296 MGDLDSLLEKTEDV--MDESTEESIDSILKGKFTLVELYAQLETISKMGPMKQIMGMIPG 353
Query: 357 FSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREV 416
F MPK + ++ K+KRY MMDSMT EE NP+L+ SR+ RIA+G+G + E+
Sbjct: 354 FGGN-MPKEAAQLTEQKLKRYKIMMDSMTMEE--KENPELIKTSRLQRIAKGAGVKQDEI 410
Query: 417 MEMLEEYKRLAKIWSKMKGLKIPKKG 442
++L+ Y + +K K+PK G
Sbjct: 411 KDLLKYYATTKNAFGNLKRGKMPKMG 436
>gi|253741984|gb|EES98841.1| SRP GTPase [Giardia intestinalis ATCC 50581]
Length = 530
Score = 368 bits (944), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 210/504 (41%), Positives = 313/504 (62%), Gaps = 27/504 (5%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIK-KI 59
MVL +LG S+ I + + + + +N ++E L ADV + + M+ ++ KI
Sbjct: 1 MVLNELGSSVLNVITKFAKTRLTTNEAVNALVDEFIGVLEAADVPTRTLEPMRKSMTTKI 60
Query: 60 VNLDDLAAGH-NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTC 118
+ + G N ++++Q+ + EL ML P +P F P + + +VIMFVGLQG+GKTTTC
Sbjct: 61 LGDPAIMEGRANTQQVVQRIVVQELVSMLSPDRPPFRPVRNRANVIMFVGLQGAGKTTTC 120
Query: 119 TKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVET 178
K+ Y+++KGW+ LVC DTFR GAFDQLKQN T K+PFYGSY+E DPV+IA +GV+
Sbjct: 121 VKFGAYYKRKGWRVGLVCCDTFRTGAFDQLKQNCTAVKLPFYGSYSEKDPVQIAQDGVKH 180
Query: 179 FKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFK 238
F N +LII+DTSGRH+QE ALF EM+ + A V P +FV+DSSIGQAA++QA AF
Sbjct: 181 FLSLNFELIILDTSGRHRQEEALFTEMKLIDNA-VQPHDHVFVLDSSIGQAAYEQADAFS 239
Query: 239 QSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGM 298
+V +G+VI+TK+DGH++GGGAL+AV+ATK+P++F+GTGE +++ E FD FVS +LG
Sbjct: 240 NAVEIGSVILTKLDGHSRGGGALAAVSATKAPIVFLGTGEKIEDLEFFDPSRFVSVMLGY 299
Query: 299 GDWSGFMDKIHEVVP---MDQQPEL--LQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSM 353
GD G +HE + +D + + + ++ +F+ R EQ +N+ KMGP+ ++ SM
Sbjct: 300 GDIMG----LHEAMQGGNIDHKAHIQTVVRMLHNHFSFRDFKEQLKNLNKMGPLQKIASM 355
Query: 354 LPGFSSELMPKGREKESQAK-IKRYMTMMDSMTNEELDSSNPKLMND------SRIMRIA 406
+PGFS + +S+ K ++ + T+MDSM +ELDS+ L + SR RIA
Sbjct: 356 VPGFSQMAASGDLDMDSEVKQLQIFNTIMDSMAAKELDSNTEILKKEGEDKFRSRAKRIA 415
Query: 407 RGSGRQVREVMEMLEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLK 466
GSG V EV+E ++ ++++ KM G K+ G + L +MN +
Sbjct: 416 IGSGYTVEEVLEFFDKAAEFSEMFGKM-GRKLKSPGALQELFSSMNMNPQMMQ------Q 468
Query: 467 QIGGVGGLQNLMKQMGSTKDMMGM 490
+ G+G LQN M +M MGM
Sbjct: 469 MMSGLGSLQN-MPEMADLAKSMGM 491
>gi|390960743|ref|YP_006424577.1| signal recognition particle protein SRP54 [Thermococcus sp. CL1]
gi|390519051|gb|AFL94783.1| signal recognition particle protein SRP54 [Thermococcus sp. CL1]
Length = 448
Score = 367 bits (943), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 201/442 (45%), Positives = 293/442 (66%), Gaps = 8/442 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L +LG +++ A+++++ + +DE + E + +I RAL+QADV +LV ++ I+K
Sbjct: 1 MALEKLGKALNSALKKLARSRTVDEATIKEVVRDIQRALIQADVNVRLVLQLTKTIEKRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKML-DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCT 119
++ AG +K+ I Q ++ EL K L KP K KP+V++ VG+QGSGKTT+
Sbjct: 61 LEEEPPAGVSKKEHIIQIVYEELTKFLGKEAKP--LEIKEKPTVLLTVGIQGSGKTTSVA 118
Query: 120 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
K A + QK+G+K +VC+DT+R GA+ QLKQ I G E D V++A EGV+ F
Sbjct: 119 KLARHLQKRGYKVGVVCSDTWRPGAYYQLKQLLEPYGIEVAGDPEEKDAVKLAREGVKYF 178
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQ 239
+++ D+IIVD++GRHK+E L EEMRQ+SEA + P VI V+D +IGQ A++QA AFK+
Sbjct: 179 REKGVDVIIVDSAGRHKEEKGLIEEMRQISEA-IKPHEVILVIDGTIGQQAYNQALAFKE 237
Query: 240 SVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMG 299
+ +G++IVTK+DG AKGGGALSAVAAT +P+ FIG GE +D+ E FD K FVSRLLGMG
Sbjct: 238 ATPIGSIIVTKLDGSAKGGGALSAVAATGAPIKFIGVGERIDDLEAFDPKRFVSRLLGMG 297
Query: 300 DWSGFMDKIHEVVPMDQ-QPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFS 358
D G ++K+ E+ + + E L+K +G F L+ MY Q + + KMGP+ Q+ M+PG
Sbjct: 298 DIEGLLEKLEELQKQQEFKEEDLEKFLKGKFNLKDMYAQLEAMQKMGPLKQILQMIPGLG 357
Query: 359 SELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVME 418
L P K + K+KRY +MDSMT EEL+ +P+++N SRI RIARGSG EV E
Sbjct: 358 YSL-PDDAVKVGEEKLKRYRVIMDSMTEEELE--HPEIINYSRIKRIARGSGTSTAEVRE 414
Query: 419 MLEEYKRLAKIWSKMKGLKIPK 440
+L +Y ++ K++ M K+ K
Sbjct: 415 LLNQYNQMKKMFKSMDKRKLAK 436
>gi|12230630|sp|O59307.3|SRP54_PYRHO RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
Length = 443
Score = 367 bits (942), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 202/457 (44%), Positives = 292/457 (63%), Gaps = 22/457 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG ++S A+++++ A +DE ++ E + +I RALLQADV +LV ++ I++
Sbjct: 1 MVLDSLGRALSNALKKIARAGSVDEALVKEVVRDIQRALLQADVNVRLVLKLTKEIQRRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKML-DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCT 119
+ AG +K+ I + ++ EL K L KP K KP+V++ VG+QGSGKTTT
Sbjct: 61 LEEKPPAGISKKEHIIKIVYEELTKFLGTEAKP--IEIKEKPTVLLTVGVQGSGKTTTVA 118
Query: 120 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
K A Y QK+G+K +VC+DT+R GA+ QLKQ I +G E D V++A EGVE F
Sbjct: 119 KLARYFQKRGYKVGVVCSDTWRPGAYHQLKQLLDPYHIEVFGDPNEKDAVKLAKEGVEYF 178
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQ 239
K + DLIIVDT+GRHK+E L EEMR +SE + P VI V+D +IGQ A++QA AFK+
Sbjct: 179 KTRDVDLIIVDTAGRHKEEKDLIEEMRMISE-EIRPHEVILVIDGTIGQQAYNQALAFKE 237
Query: 240 SVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMG 299
+ +G++IVTK+D AKGGGALSAVAAT +P+ FIG GE +D+ E FD FVSRLLG+G
Sbjct: 238 ATPIGSIIVTKLDSSAKGGGALSAVAATGAPIKFIGVGEKIDDLEPFDPARFVSRLLGLG 297
Query: 300 DWSGFMDKIHEV-VPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFS 358
D G ++K E+ ++ E + + G FTL+ MY Q + + KMGP+ Q+ M+PG
Sbjct: 298 DIQGLLEKFKELEKEVEFTEEDIDRFLRGKFTLKDMYAQLEAMRKMGPLKQILRMIPGLG 357
Query: 359 ----SELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVR 414
EL+ G E +++++ +MDSMT EEL NP+++N SRI RIARGSG ++
Sbjct: 358 YSLPDELISVGEE-----RLRKFKVIMDSMTEEEL--MNPEIINYSRIKRIARGSGTSIK 410
Query: 415 EVMEMLEEYKRLAKIWSKMKGLKIPKKGEMSALSRNM 451
+V E+L +Y ++ K + M K ++S L+R
Sbjct: 411 DVKELLTQYNQMKKFFKSM------NKRQLSRLARRF 441
>gi|14591457|ref|NP_143537.1| signal recognition particle protein Srp54 [Pyrococcus horikoshii
OT3]
gi|3258124|dbj|BAA30807.1| 445aa long hypothetical signal recognition particle protein
[Pyrococcus horikoshii OT3]
Length = 445
Score = 367 bits (942), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 202/456 (44%), Positives = 292/456 (64%), Gaps = 22/456 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG ++S A+++++ A +DE ++ E + +I RALLQADV +LV ++ I++
Sbjct: 3 MVLDSLGRALSNALKKIARAGSVDEALVKEVVRDIQRALLQADVNVRLVLKLTKEIQRRA 62
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKML-DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCT 119
+ AG +K+ I + ++ EL K L KP K KP+V++ VG+QGSGKTTT
Sbjct: 63 LEEKPPAGISKKEHIIKIVYEELTKFLGTEAKP--IEIKEKPTVLLTVGVQGSGKTTTVA 120
Query: 120 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
K A Y QK+G+K +VC+DT+R GA+ QLKQ I +G E D V++A EGVE F
Sbjct: 121 KLARYFQKRGYKVGVVCSDTWRPGAYHQLKQLLDPYHIEVFGDPNEKDAVKLAKEGVEYF 180
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQ 239
K + DLIIVDT+GRHK+E L EEMR +SE + P VI V+D +IGQ A++QA AFK+
Sbjct: 181 KTRDVDLIIVDTAGRHKEEKDLIEEMRMISE-EIRPHEVILVIDGTIGQQAYNQALAFKE 239
Query: 240 SVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMG 299
+ +G++IVTK+D AKGGGALSAVAAT +P+ FIG GE +D+ E FD FVSRLLG+G
Sbjct: 240 ATPIGSIIVTKLDSSAKGGGALSAVAATGAPIKFIGVGEKIDDLEPFDPARFVSRLLGLG 299
Query: 300 DWSGFMDKIHEV-VPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFS 358
D G ++K E+ ++ E + + G FTL+ MY Q + + KMGP+ Q+ M+PG
Sbjct: 300 DIQGLLEKFKELEKEVEFTEEDIDRFLRGKFTLKDMYAQLEAMRKMGPLKQILRMIPGLG 359
Query: 359 ----SELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVR 414
EL+ G E +++++ +MDSMT EEL NP+++N SRI RIARGSG ++
Sbjct: 360 YSLPDELISVGEE-----RLRKFKVIMDSMTEEEL--MNPEIINYSRIKRIARGSGTSIK 412
Query: 415 EVMEMLEEYKRLAKIWSKMKGLKIPKKGEMSALSRN 450
+V E+L +Y ++ K + M K ++S L+R
Sbjct: 413 DVKELLTQYNQMKKFFKSM------NKRQLSRLARR 442
>gi|336121936|ref|YP_004576711.1| Signal recognition 54 kDa protein [Methanothermococcus okinawensis
IH1]
gi|334856457|gb|AEH06933.1| Signal recognition 54 kDa protein [Methanothermococcus okinawensis
IH1]
Length = 456
Score = 366 bits (940), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 193/446 (43%), Positives = 293/446 (65%), Gaps = 13/446 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
++L +LG +IS A+ ++ NAT +D+K++ E + +I +AL+QADV KLV +M I+K
Sbjct: 6 IMLDKLGQNISSALNKIKNATFVDKKLIKEVIKDIQKALIQADVNVKLVFKMSKEIEKRA 65
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKML--DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTC 118
+D+ G +K+ I + ++ EL K+L + K PKK ++I+ VG+QGSGKTT+
Sbjct: 66 INEDIPKGLSKKEHIIKIVYEELVKLLGEEGQKLELNPKK--QNIILLVGIQGSGKTTSA 123
Query: 119 TKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESD-PVRIAVEGVE 177
K A Y QK+G KP L+ AD +R A+ QLKQ A K +P YG T++ P+ IA EG++
Sbjct: 124 AKLARYIQKRGLKPGLIAADIYRPAAYQQLKQLAEKIHVPLYGDETKTKTPMEIAKEGIK 183
Query: 178 TFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAF 237
KK D++I+DT+GRHK+E L EEM+Q+ + VNPD +I V+D ++GQ A +QA+AF
Sbjct: 184 NLKK--MDVLIIDTAGRHKEETGLLEEMKQIKD-VVNPDEIILVIDGTLGQQAKNQAKAF 240
Query: 238 KQSV-SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLL 296
K +V +G+++VTK+DG AKGGGALSAVA +P+ FIGTGE++D+ E FD F+SRLL
Sbjct: 241 KDAVGEIGSILVTKLDGSAKGGGALSAVAEINAPIKFIGTGENVDDLEPFDPNKFISRLL 300
Query: 297 GMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPG 356
GMGD ++K +++ D + E + + +G FTL +Y Q + I KMGP+ Q+ SM+PG
Sbjct: 301 GMGDLEALLEKTEDLIDEDTE-ESIDAILKGKFTLNELYSQLEAISKMGPMKQIMSMIPG 359
Query: 357 FSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREV 416
F + PK ++ K+K+Y +MDSMT EE NP+++ SR+ RI+RG+G + E+
Sbjct: 360 FGGAI-PKDAANLTEQKLKKYKIIMDSMTKEE--KENPEIIKTSRMKRISRGAGVKQEEI 416
Query: 417 MEMLEEYKRLAKIWSKMKGLKIPKKG 442
E+L+ Y + +K K+ K G
Sbjct: 417 KELLKYYATTKNAFQNLKRGKMLKMG 442
>gi|154290868|ref|XP_001546023.1| hypothetical protein BC1G_15366 [Botryotinia fuckeliana B05.10]
Length = 311
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 176/311 (56%), Positives = 232/311 (74%), Gaps = 1/311 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ ++ +DEK + + EI ALL+ADV KLV ++ +IK V
Sbjct: 1 MVLQDLGRRINAAVTDLTRSSNLDEKAFDGMIKEICSALLEADVNVKLVGNLRKSIKASV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N +LA NK+++IQ+A+++EL K++DP F PKKGK ++IMFVGLQG+GKTTTCTK
Sbjct: 61 NFKELAPAVNKKKVIQKAVYDELVKLVDPHAEPFKPKKGKANIIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G+K LVCADTFRAGAFDQLKQNATKAKIP+YGS T++DP +A EGV+ FK
Sbjct: 121 LARWYQSRGFKACLVCADTFRAGAFDQLKQNATKAKIPYYGSLTQTDPAVVAKEGVDKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KE ++IIVDTSGRH+QE ALF+EM + A V PD + VMD+SIGQ A Q++AFK++
Sbjct: 181 KEKFEIIIVDTSGRHRQEDALFQEMVDIQTA-VKPDQTVMVMDASIGQQAEAQSKAFKET 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
GA+I+TK DGHA GGGA+SAVAAT +P+IFIGTGEHM + E F FVS+LLGMGD
Sbjct: 240 ADFGAIIITKTDGHASGGGAISAVAATHTPIIFIGTGEHMLDLEKFAPTQFVSKLLGMGD 299
Query: 301 WSGFMDKIHEV 311
G M+ + +
Sbjct: 300 MQGLMEHVQSL 310
>gi|347835299|emb|CCD49871.1| similar to signal recognition particle 54 kda protein [Botryotinia
fuckeliana]
Length = 309
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 176/309 (56%), Positives = 231/309 (74%), Gaps = 1/309 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG I+ A+ ++ ++ +DEK + + EI ALL+ADV KLV ++ +IK V
Sbjct: 1 MVLQDLGRRINAAVTDLTRSSNLDEKAFDGMIKEICSALLEADVNVKLVGNLRKSIKASV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N +LA NK+++IQ+A+++EL K++DP F PKKGK ++IMFVGLQG+GKTTTCTK
Sbjct: 61 NFKELAPAVNKKKVIQKAVYDELVKLVDPHAEPFKPKKGKANIIMFVGLQGAGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A ++Q +G+K LVCADTFRAGAFDQLKQNATKAKIP+YGS T++DP +A EGV+ FK
Sbjct: 121 LARWYQSRGFKACLVCADTFRAGAFDQLKQNATKAKIPYYGSLTQTDPAVVAKEGVDKFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KE ++IIVDTSGRH+QE ALF+EM + A V PD + VMD+SIGQ A Q++AFK++
Sbjct: 181 KEKFEIIIVDTSGRHRQEDALFQEMVDIQTA-VKPDQTVMVMDASIGQQAEAQSKAFKET 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
GA+I+TK DGHA GGGA+SAVAAT +P+IFIGTGEHM + E F FVS+LLGMGD
Sbjct: 240 ADFGAIIITKTDGHASGGGAISAVAATHTPIIFIGTGEHMLDLEKFAPTQFVSKLLGMGD 299
Query: 301 WSGFMDKIH 309
G M+ +
Sbjct: 300 MQGLMEHVQ 308
>gi|256810320|ref|YP_003127689.1| signal recognition particle protein Srp54 [Methanocaldococcus
fervens AG86]
gi|256793520|gb|ACV24189.1| GTP-binding signal recognition particle SRP54 G- domain protein
[Methanocaldococcus fervens AG86]
Length = 451
Score = 365 bits (938), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 197/437 (45%), Positives = 287/437 (65%), Gaps = 13/437 (2%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L +LG ++++A+ ++ A +D+K++ E + +I RAL+QADV KLV +M I++
Sbjct: 1 MLDKLGENLNKALNKLKAAAFVDKKLIKEVIKDIQRALIQADVNVKLVLKMSKEIERRAL 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKML--DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCT 119
++ G +K+ I + ++ EL K+L + K +PKK +VI+ VG+QGSGKTTT
Sbjct: 61 KEETPKGLSKKEHIIKIVYEELVKLLGEEAKKLELSPKK--QNVILLVGIQGSGKTTTAA 118
Query: 120 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTES-DPVRIAVEGVET 178
K A Y QK+G KPAL+ ADT+R A++QLKQ A K +P YG T++ PV I EG+E
Sbjct: 119 KLARYIQKRGLKPALIAADTYRPAAYEQLKQLAEKIHVPLYGDETKTKSPVEIVKEGMEK 178
Query: 179 FKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFK 238
FKK D++I+DT+GRHK+E L EEM+Q+ E T NPD +I V+D +IGQ A QA+AFK
Sbjct: 179 FKK--ADVLIIDTAGRHKEERGLLEEMKQIKEVT-NPDEIILVIDGTIGQQAGIQAKAFK 235
Query: 239 QSV-SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLG 297
++V +G++IVTK+DG AKGGGALSAVA T +P+ FIG GE +D+ E FD K F+SRLLG
Sbjct: 236 EAVGEIGSIIVTKLDGSAKGGGALSAVAETGAPIKFIGIGEGIDDLEPFDPKKFISRLLG 295
Query: 298 MGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGF 357
MGD ++K ++V ++ E + + +G FTL + Q + I MG + ++ SM+PGF
Sbjct: 296 MGDLDSLLEKAEDMVD-EKTEESIDAIMKGKFTLNELLTQLEAIENMGSMKKILSMIPGF 354
Query: 358 SSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVM 417
MPK ++AKIK+Y ++ SMT EE NPK++ SRI RIARGSG EV
Sbjct: 355 GGA-MPKELSNLTEAKIKKYKVIISSMTKEE--RENPKIIKASRIRRIARGSGTTENEVR 411
Query: 418 EMLEEYKRLAKIWSKMK 434
E+L+ Y+ K++
Sbjct: 412 EVLKYYETTKNAIDKLR 428
>gi|14520695|ref|NP_126170.1| signal recognition particle protein Srp54 [Pyrococcus abyssi GE5]
gi|12230641|sp|Q9V1E8.1|SRP54_PYRAB RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|5457911|emb|CAB49401.1| srp54 signal recognition particle, subunit SRP54 [Pyrococcus abyssi
GE5]
gi|380741228|tpe|CCE69862.1| TPA: signal recognition particle protein Srp54 [Pyrococcus abyssi
GE5]
Length = 443
Score = 364 bits (934), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 194/435 (44%), Positives = 284/435 (65%), Gaps = 8/435 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG ++S A+++++ A +DE ++ E + +I RAL+QADV +LV ++ I++
Sbjct: 1 MVLDSLGKALSNALKKIARAGSVDEALVKEVVRDIQRALIQADVNVRLVLKLTKEIQRRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKML-DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCT 119
+ AG +K+ I + ++ EL K L KP K KP++++ VG+QGSGKTTT
Sbjct: 61 LEEKPPAGISKKEHIIKIVYEELTKFLGTEAKP--IEIKEKPTILLMVGVQGSGKTTTVA 118
Query: 120 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
K A + QK+G+K +VC+DT+R GA+ QLKQ I +G E D +++A EGVE F
Sbjct: 119 KLARHFQKRGYKVGVVCSDTWRPGAYHQLKQLLDPYHIEVFGDPNEKDAIKLAKEGVEHF 178
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQ 239
K + DLIIVDT+GRHK+E L EEMR +S + P VI V+D +IGQ A++QA AFK+
Sbjct: 179 KAKGVDLIIVDTAGRHKEEKDLIEEMRMISN-EIKPHEVILVIDGTIGQQAYNQALAFKE 237
Query: 240 SVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMG 299
+ +G++IVTK+D AKGGGALSAVAAT +P+ FIGTGE +D+ E FD FVSRLLG+G
Sbjct: 238 ATPIGSIIVTKLDSSAKGGGALSAVAATGAPIKFIGTGEKIDDLEPFDPARFVSRLLGLG 297
Query: 300 DWSGFMDKIHEV-VPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFS 358
D G ++K E+ ++ E L++ +G FTL+ MY Q + + KMGP+ Q+ M+PG
Sbjct: 298 DIQGLLEKFKELEKEVEFTEEDLERFLKGKFTLKDMYAQLEAMRKMGPLKQILRMIPGLG 357
Query: 359 SELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVME 418
L P + +++++ +MDSMT EEL NP ++N SRI RIARGSG V++V E
Sbjct: 358 YSL-PDEVISVGEERLRKFKVIMDSMTEEEL--MNPDIINYSRIKRIARGSGTSVKDVKE 414
Query: 419 MLEEYKRLAKIWSKM 433
+L +Y ++ K + M
Sbjct: 415 LLNQYNQMKKFFKSM 429
>gi|322802263|gb|EFZ22659.1| hypothetical protein SINV_03515 [Solenopsis invicta]
Length = 275
Score = 364 bits (934), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 170/272 (62%), Positives = 222/272 (81%), Gaps = 1/272 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNAT+I+E+VLN L EI ALL+ADV +LV++++ N+++++
Sbjct: 1 MVLADLGRKITSALRSLSNATVINEEVLNSMLKEICAALLEADVNIRLVKKLRENVRQVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ +D+A G NKRR+IQ A+F EL K++DPG ++ P KG+P+VIMFVGLQGSGKTTTCTK
Sbjct: 61 DFEDMAGGLNKRRMIQSAVFKELVKLIDPGVKAYQPVKGRPNVIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++ KK WK LVCADTFRAGA+DQ+KQNATKA+IPFYGSYTE DPV IA +GV+ FK
Sbjct: 121 LAYHYLKKNWKACLVCADTFRAGAYDQIKQNATKARIPFYGSYTEVDPVAIAQDGVDMFK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KE ++IIVDTSGRHKQE +LFEEM QV+ A V PD +IFVMD++IGQA QA+AFK+
Sbjct: 181 KEGYEIIIVDTSGRHKQEESLFEEMLQVANA-VQPDNIIFVMDATIGQACEAQAKAFKER 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVI 272
V+VG++I+TK+DGHAKGGGALSA+ S +
Sbjct: 240 VNVGSIIITKLDGHAKGGGALSALTCEFSDFV 271
>gi|289192492|ref|YP_003458433.1| GTP-binding signal recognition particle SRP54 G- domain protein
[Methanocaldococcus sp. FS406-22]
gi|288938942|gb|ADC69697.1| GTP-binding signal recognition particle SRP54 G- domain protein
[Methanocaldococcus sp. FS406-22]
Length = 451
Score = 363 bits (931), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 196/437 (44%), Positives = 284/437 (64%), Gaps = 13/437 (2%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L +LG ++++A+ ++ A +D+K++ E + +I RAL+QADV KLV +M I++
Sbjct: 1 MLDKLGENLNKALNKLKTAAFVDKKLIKEVIKDIQRALIQADVNVKLVLKMSKEIERRAL 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKML--DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCT 119
+ G +K+ I + ++ EL K+L + K PKK ++I+ VG+QGSGKTTT
Sbjct: 61 EEKTPKGLSKKEHIIKIVYEELVKLLGEEAKKLELNPKK--QNIILLVGIQGSGKTTTAA 118
Query: 120 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTES-DPVRIAVEGVET 178
K A Y QK+G KPAL+ ADT+R A++QLKQ A K +P YG T + PV I EG+E
Sbjct: 119 KLARYIQKRGLKPALIAADTYRPAAYEQLKQLAEKIHVPIYGDETRTKSPVDIVKEGMEK 178
Query: 179 FKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFK 238
FKK D++I+DT+GRHK+E L EEM+Q+ E T NPD +I V+D +IGQ A QA+AFK
Sbjct: 179 FKK--ADVLIIDTAGRHKEEKGLLEEMKQIKEIT-NPDEIILVIDGTIGQQAGIQAKAFK 235
Query: 239 QSV-SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLG 297
++V +G++IVTK+DG AKGGGALSAVA TK+P+ FIG GE +D+ E FD K F+SRLLG
Sbjct: 236 EAVGEIGSIIVTKLDGSAKGGGALSAVAETKAPIKFIGIGEGIDDLEPFDPKKFISRLLG 295
Query: 298 MGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGF 357
MGD ++K ++V ++ E + + G FTL + Q + I MG + ++ SM+PGF
Sbjct: 296 MGDLESLLEKAEDMVD-EKTEESIDAIMRGKFTLNELMTQLEAIENMGSMKKILSMIPGF 354
Query: 358 SSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVM 417
MPK ++AKIK+Y ++ SMT EE NPK++ SRI RIARGSG +V
Sbjct: 355 GGA-MPKELSHLTEAKIKKYKVIISSMTKEE--RENPKIIKASRIRRIARGSGTTENDVR 411
Query: 418 EMLEEYKRLAKIWSKMK 434
E+L+ Y+ K++
Sbjct: 412 EVLKYYETTKNAIDKLR 428
>gi|123492715|ref|XP_001326126.1| SRP54-type protein [Trichomonas vaginalis G3]
gi|121909036|gb|EAY13903.1| SRP54-type protein, putative [Trichomonas vaginalis G3]
Length = 494
Score = 363 bits (931), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 192/489 (39%), Positives = 311/489 (63%), Gaps = 15/489 (3%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L LG + +I+++S + IDEKV + E+ ++L+ AD ++V + +K +N
Sbjct: 1 MLQDLGEKLMGSIKKLSESKTIDEKVYVTFMAEVAKSLIAADCSKEIVFDFSRRLKDSIN 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
++ G + RR+I++A+FNEL K++DPG P++ P+K ++ M VGLQG+GKTTT TK
Sbjct: 61 FKEIPPGLSIRRVIEKAVFNELVKLIDPGIPAYKPQKKMLNIFMMVGLQGAGKTTTVTKL 120
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKK 181
A +++++ W+ ++ ADTFRAGA +QL QNA A+IP++ +TE DPV+ A++G+E F+K
Sbjct: 121 ANFYKRRNWRTGVIAADTFRAGAREQLMQNAQTARIPYFVDFTEQDPVQAALKGIEKFRK 180
Query: 182 ENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSV 241
+ +++I+DTSGRH QE ALF EM+ ++ A VNP +IFVMD +IGQAA+DQA FK +V
Sbjct: 181 DKYEIVIIDTSGRHMQEEALFAEMKALA-AAVNPHEIIFVMDGTIGQAAYDQALGFKNAV 239
Query: 242 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 301
VG++I+TK+D +AKGGGALSAVAAT SP+ FIG+GE + E FD FVSRLLG+ D
Sbjct: 240 GVGSIIITKLDSNAKGGGALSAVAATNSPISFIGSGEQFTDLEWFDPNSFVSRLLGIQD- 298
Query: 302 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 361
G + + E + + E+ + + +G F+ R +Y Q++ +L +G + + + +
Sbjct: 299 PGVIQRTLEEIDKEANKEIAEHIQKGQFSFRDLYNQYKMVLDVGNFNSMLDSIT-IAQGI 357
Query: 362 MP--KGREKESQAKIKRYMTMMDSMTNEELDSSNPKLM--NDSRIMRIARGSGRQVREVM 417
P K + ++ +KR + ++D+M+ E++ NP L ++SRI R+ GSG V
Sbjct: 358 KPGMKNDPEHTKDTVKRILVVIDAMSTSEIE--NPLLFKNDESRIARLCSGSGMPPPFVQ 415
Query: 418 EMLEEYKRLAKIWSKM--KGLKIPKKGEMS--ALSRNMNAQ--HMSKVLPQGMLKQIGGV 471
++ E +R ++ +M K L + + E A R Q M+K + + ML+ +GG+
Sbjct: 416 YVINEQRRWETMFKRMDKKTLALMSQTEQPNFANERQFKEQVMKMAKSMDKEMLRSVGGI 475
Query: 472 GGLQNLMKQ 480
GL+ M+Q
Sbjct: 476 EGLEASMRQ 484
>gi|332157931|ref|YP_004423210.1| signal recognition particle protein Srp54 [Pyrococcus sp. NA2]
gi|331033394|gb|AEC51206.1| signal recognition particle protein Srp54 [Pyrococcus sp. NA2]
Length = 443
Score = 362 bits (930), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 200/456 (43%), Positives = 296/456 (64%), Gaps = 22/456 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG ++S A+++++ A +DE ++ E + +I RAL+QADV +LV + I++
Sbjct: 1 MVLDTLGKALSNALKKIARAGSVDEALVKEVVRDIQRALIQADVNVRLVLNLTREIQRRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKML-DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCT 119
+ AG +++ I + ++ EL K L +P + KP++++ VG+QGSGKTTT
Sbjct: 61 LEEKPPAGISRKEHIIKIVYEELTKFLGTEARP--IEIREKPTILLMVGVQGSGKTTTVA 118
Query: 120 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
K A Y QK+G+K +VC+DT+R GA+ QLKQ I +G E D +++A EGV+ F
Sbjct: 119 KLARYFQKRGYKVGVVCSDTWRPGAYHQLKQLLDPYHIEVFGDPQEKDAIKLAREGVKHF 178
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQ 239
K++ DLIIVDT+GRHK+E L EEMRQ+SEA +NP VI V+D +IGQ A++QA AFK+
Sbjct: 179 KEKGVDLIIVDTAGRHKEEKNLIEEMRQISEA-INPHEVILVIDGTIGQQAYNQALAFKE 237
Query: 240 SVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMG 299
+ +G++IVTK+D AKGGGALSAVAAT +P+ FIG GE +D+ E FD FVSRLLG+G
Sbjct: 238 ATPIGSIIVTKLDSSAKGGGALSAVAATGAPIKFIGVGEKIDDIEPFDPARFVSRLLGLG 297
Query: 300 DWSGFMDKIHEVVPMDQQPEL-LQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFS 358
D G ++K E+ + E L++ G FTL+ MY Q + + KMGP+ Q+ M+PG
Sbjct: 298 DIQGLLEKFKEIEKEIEIKEEDLERFLRGKFTLKDMYAQLEAMRKMGPLKQILRMIPGLG 357
Query: 359 ----SELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVR 414
EL+ G E +++++ +MDSMT EEL NP+++N SRI RIARGSG V+
Sbjct: 358 YSLPDELISVGEE-----RLRKFKVIMDSMTEEEL--MNPEIINYSRIKRIARGSGTSVK 410
Query: 415 EVMEMLEEYKRLAKIWSKMKGLKIPKKGEMSALSRN 450
+V E+L +Y+++ K + M K ++S L+R
Sbjct: 411 DVKELLNQYRQMKKFFKSM------NKRQLSRLARR 440
>gi|15668272|ref|NP_247065.1| signal recognition particle protein Srp54 [Methanocaldococcus
jannaschii DSM 2661]
gi|2500886|sp|Q57565.1|SRP54_METJA RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|1590878|gb|AAB98081.1| signal recognition particle, subunit SRP54 [Methanocaldococcus
jannaschii DSM 2661]
Length = 451
Score = 362 bits (929), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 197/437 (45%), Positives = 283/437 (64%), Gaps = 13/437 (2%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L +LG ++++A+ ++ A +D+K++ E + +I RAL+QADV KLV +M I++
Sbjct: 1 MLDKLGENLNKALNKLKAAAFVDKKLIKEVIKDIQRALIQADVNVKLVLKMSKEIERRAL 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKML--DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCT 119
+ G +K+ I + ++ EL K+L + K PKK +VI+ VG+QGSGKTTT
Sbjct: 61 EEKTPKGLSKKEHIIKIVYEELVKLLGEEAKKLELNPKK--QNVILLVGIQGSGKTTTAA 118
Query: 120 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTES-DPVRIAVEGVET 178
K A Y QK+G KPAL+ ADT+R A++QLKQ A K +P YG T + PV I EG+E
Sbjct: 119 KLARYIQKRGLKPALIAADTYRPAAYEQLKQLAEKIHVPIYGDETRTKSPVDIVKEGMEK 178
Query: 179 FKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFK 238
FKK D++I+DT+GRHK+E L EEM+Q+ E T NPD +I V+D +IGQ A QA+AFK
Sbjct: 179 FKK--ADVLIIDTAGRHKEEKGLLEEMKQIKEIT-NPDEIILVIDGTIGQQAGIQAKAFK 235
Query: 239 QSV-SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLG 297
++V +G++IVTK+DG AKGGGALSAVA TK+P+ FIG GE +D+ E FD K F+SRLLG
Sbjct: 236 EAVGEIGSIIVTKLDGSAKGGGALSAVAETKAPIKFIGIGEGIDDLEPFDPKKFISRLLG 295
Query: 298 MGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGF 357
MGD ++K ++V ++ E + + G FTL + Q + I MG + ++ SM+PGF
Sbjct: 296 MGDLESLLEKAEDMVD-EKTEESIDAIMRGKFTLNELMTQLEAIENMGSMKKILSMIPGF 354
Query: 358 SSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVM 417
MPK ++AKIK+Y ++ SMT EE NPK++ SRI RIARGSG +V
Sbjct: 355 GGA-MPKELSHLTEAKIKKYKVIISSMTKEE--RENPKIIKASRIRRIARGSGTTENDVR 411
Query: 418 EMLEEYKRLAKIWSKMK 434
E+L Y+ K++
Sbjct: 412 EVLRYYETTKNAIDKLR 428
>gi|323714481|pdb|3NDB|B Chain B, Crystal Structure Of A Signal Sequence Bound To The Signal
Recognition Particle
Length = 454
Score = 361 bits (927), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 196/434 (45%), Positives = 281/434 (64%), Gaps = 13/434 (2%)
Query: 5 QLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDD 64
+LG ++++A+ ++ A +D+K++ E + +I RAL+QADV KLV +M I++ +
Sbjct: 3 KLGENLNKALNKLKAAAFVDKKLIKEVIKDIQRALIQADVNVKLVLKMSKEIERRALEEK 62
Query: 65 LAAGHNKRRIIQQAIFNELCKML--DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYA 122
G +K+ I + ++ EL K+L + K PKK +VI+ VG+QGSGKTTT K A
Sbjct: 63 TPKGLSKKEHIIKIVYEELVKLLGEEAKKLELNPKK--QNVILLVGIQGSGKTTTAAKLA 120
Query: 123 YYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTES-DPVRIAVEGVETFKK 181
Y QK+G KPAL+ ADT+R A++QLKQ A K +P YG T + PV I EG+E FKK
Sbjct: 121 RYIQKRGLKPALIAADTYRPAAYEQLKQLAEKIHVPIYGDETRTKSPVDIVKEGMEKFKK 180
Query: 182 ENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSV 241
D++I+DT+GRHK+E L EEM+Q+ E T NPD +I V+D +IGQ A QA+AFK++V
Sbjct: 181 --ADVLIIDTAGRHKEEKGLLEEMKQIKEIT-NPDEIILVIDGTIGQQAGIQAKAFKEAV 237
Query: 242 -SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
+G++IVTK+DG AKGGGALSAVA TK+P+ FIG GE +D+ E FD K F+SRLLGMGD
Sbjct: 238 GEIGSIIVTKLDGSAKGGGALSAVAETKAPIKFIGIGEGIDDLEPFDPKKFISRLLGMGD 297
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
++K ++V ++ E + + G FTL + Q + I MG + ++ SM+PGF
Sbjct: 298 LESLLEKAEDMVD-EKTEESIDAIMRGKFTLNELMTQLEAIENMGSMKKILSMIPGFGG- 355
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEML 420
MPK ++AKIK+Y ++ SMT EE NPK++ SRI RIARGSG +V E+L
Sbjct: 356 AMPKELSHLTEAKIKKYKVIISSMTKEE--RENPKIIKASRIRRIARGSGTTENDVREVL 413
Query: 421 EEYKRLAKIWSKMK 434
Y+ K++
Sbjct: 414 RYYETTKNAIDKLR 427
>gi|337283719|ref|YP_004623193.1| signal recognition particle protein Srp54 [Pyrococcus yayanosii
CH1]
gi|334899653|gb|AEH23921.1| signal recognition particle protein Srp54 [Pyrococcus yayanosii
CH1]
Length = 443
Score = 361 bits (926), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 193/435 (44%), Positives = 289/435 (66%), Gaps = 8/435 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L LG ++S A+++++ A +DE ++ E + +I RAL+QADV +LV ++ I++
Sbjct: 1 MALDALGRALSNALKKIARAGTVDETLVKEVVRDIQRALIQADVNVRLVLKLTKEIQRRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKML-DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCT 119
+ AG +++ I + ++ EL K+L KP K KP +++ VG+QGSGKTTT
Sbjct: 61 LEEKPPAGISRKEHIIKIVYEELSKLLGSEAKP--IEIKEKPMILLMVGIQGSGKTTTVA 118
Query: 120 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
K A + QK+G+K +VC+DT+R GA+ QL+Q + +G+ E D V++A EGVE F
Sbjct: 119 KLARHFQKRGYKVGVVCSDTWRPGAYHQLRQLLDPYHVEVFGNPEEKDAVKLAREGVEYF 178
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQ 239
+ + D+IIVDT+GRHK+E L EEMRQ+SEA + P VI V+D +IGQ A+ QA AFK+
Sbjct: 179 RGKGVDIIIVDTAGRHKEEKGLIEEMRQISEA-IRPHEVILVIDGTIGQQAYSQALAFKE 237
Query: 240 SVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMG 299
+ +G++IVTK+DG AKGGGALSAVAAT +P+ FIG GE +D+ E FD K FVSRLLG+G
Sbjct: 238 ATPIGSIIVTKLDGSAKGGGALSAVAATGAPIKFIGVGEKIDDLEPFDPKRFVSRLLGLG 297
Query: 300 DWSGFMDKIHEVVPMDQQPEL-LQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFS 358
D G ++K E+ + E +++ +G FTL+ MY Q + + KMGP+ Q+ M+PG
Sbjct: 298 DIQGLLEKFEELEKEVEFSEKDVERFLKGKFTLKDMYAQLEAMQKMGPLKQILRMIPGLG 357
Query: 359 SELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVME 418
L P + ++K++ +MDSMT EEL+ NP ++N SR+ RIARGSG V++V E
Sbjct: 358 YSL-PDEVISVGEERLKKFRVIMDSMTEEELE--NPGIINYSRMKRIARGSGTSVKDVKE 414
Query: 419 MLEEYKRLAKIWSKM 433
+LE+YK++ + + M
Sbjct: 415 LLEQYKQMKRFFKTM 429
>gi|158430970|pdb|2V3C|C Chain C, Crystal Structure Of The Srp54-Srp19-7s.S Srp Rna Complex
Of M. Jannaschii
gi|158430971|pdb|2V3C|D Chain D, Crystal Structure Of The Srp54-Srp19-7s.S Srp Rna Complex
Of M. Jannaschii
Length = 432
Score = 361 bits (926), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 195/423 (46%), Positives = 277/423 (65%), Gaps = 13/423 (3%)
Query: 5 QLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDD 64
+LG ++++A+ ++ A +D+K++ E + +I RAL+QADV KLV +M I++ +
Sbjct: 3 KLGENLNKALNKLKAAAFVDKKLIKEVIKDIQRALIQADVNVKLVLKMSKEIERRALEEK 62
Query: 65 LAAGHNKRRIIQQAIFNELCKML--DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYA 122
G +K+ I + ++ EL K+L + K PKK +VI+ VG+QGSGKTTT K A
Sbjct: 63 TPKGLSKKEHIIKIVYEELVKLLGEEAKKLELNPKK--QNVILLVGIQGSGKTTTAAKLA 120
Query: 123 YYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTES-DPVRIAVEGVETFKK 181
Y QK+G KPAL+ ADT+R A++QLKQ A K +P YG T + PV I EG+E FKK
Sbjct: 121 RYIQKRGLKPALIAADTYRPAAYEQLKQLAEKIHVPIYGDETRTKSPVDIVKEGMEKFKK 180
Query: 182 ENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSV 241
D++I+DT+GRHK+E L EEM+Q+ E T NPD +I V+D +IGQ A QA+AFK++V
Sbjct: 181 --ADVLIIDTAGRHKEEKGLLEEMKQIKEIT-NPDEIILVIDGTIGQQAGIQAKAFKEAV 237
Query: 242 -SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
+G++IVTK+DG AKGGGALSAVA TK+P+ FIG GE +D+ E FD K F+SRLLGMGD
Sbjct: 238 GEIGSIIVTKLDGSAKGGGALSAVAETKAPIKFIGIGEGIDDLEPFDPKKFISRLLGMGD 297
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
++K ++V ++ E + + G FTL + Q + I MG + ++ SM+PGF
Sbjct: 298 LESLLEKAEDMVD-EKTEESIDAIMRGKFTLNELMTQLEAIENMGSMKKILSMIPGFGG- 355
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEML 420
MPK ++AKIK+Y ++ SMT EE NPK++ SRI RIARGSG +V E+L
Sbjct: 356 AMPKELSHLTEAKIKKYKVIISSMTKEE--RENPKIIKASRIRRIARGSGTTENDVREVL 413
Query: 421 EEY 423
Y
Sbjct: 414 RYY 416
>gi|261402637|ref|YP_003246861.1| signal recognition particle protein Srp54 [Methanocaldococcus
vulcanius M7]
gi|261369630|gb|ACX72379.1| GTP-binding signal recognition particle SRP54 G- domain protein
[Methanocaldococcus vulcanius M7]
Length = 450
Score = 360 bits (923), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 194/437 (44%), Positives = 282/437 (64%), Gaps = 14/437 (3%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L +LG ++++A+ ++ A +D K++ E + +I RAL+QADV KLV +M I++
Sbjct: 1 MLDKLGENLNKALNKLKAAAFVDRKLIKEVIKDIQRALIQADVNVKLVLKMSKEIERRAL 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKML--DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCT 119
+ G +K+ I + ++ EL K+L + K PKK +VI+ +G+QGSGKTTT
Sbjct: 61 EEKTPKGLSKKEHIIKIVYEELVKLLGEEAKKLELNPKK--QNVILLIGIQGSGKTTTAA 118
Query: 120 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTES-DPVRIAVEGVET 178
K A Y QK+G KPAL+ ADT+R A++QLKQ A K +P YG T + DPV I EG++
Sbjct: 119 KLARYVQKRGLKPALIAADTYRPAAYEQLKQLAEKIHVPLYGDETRTKDPVEIVKEGMQK 178
Query: 179 FKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFK 238
FKK D++I+DT+GRHK+E L EEM+Q+ E T NPD +I V+D +IGQ A QA+AFK
Sbjct: 179 FKK--ADVLIIDTAGRHKEEKGLLEEMKQIKEIT-NPDEIILVIDGTIGQQARIQAKAFK 235
Query: 239 QSV-SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLG 297
+V +G++IVTK+DG AKGGGALSAVA T++P+ FIG GE +D+ E FD K F+SRLLG
Sbjct: 236 DAVGEIGSIIVTKLDGSAKGGGALSAVAETQAPIKFIGVGEGIDDLEPFDPKKFISRLLG 295
Query: 298 MGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGF 357
MGD ++K ++V ++ E + + +G FTL + Q + I MG + ++ SM+PG
Sbjct: 296 MGDLDSLLEKAEDMVD-EKTEESIDAIMKGKFTLNELMTQLEAIENMGSMKKIMSMIPGL 354
Query: 358 SSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVM 417
MPK +++KIKRY ++ SMT EE NPK++ SRI RIARGSG +V
Sbjct: 355 GG--MPKELSHLTESKIKRYKVIISSMTKEE--RENPKIIKASRIKRIARGSGTSESDVR 410
Query: 418 EMLEEYKRLAKIWSKMK 434
E+L Y+ K++
Sbjct: 411 EVLRYYETTKNAIDKLR 427
>gi|297619646|ref|YP_003707751.1| GTP-binding signal recognition particle SRP54 G- domain-containing
protein [Methanococcus voltae A3]
gi|297378623|gb|ADI36778.1| GTP-binding signal recognition particle SRP54 G- domain protein
[Methanococcus voltae A3]
Length = 450
Score = 358 bits (919), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 189/445 (42%), Positives = 291/445 (65%), Gaps = 13/445 (2%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L +LG +IS A+ ++ +AT++D+K++ E + +I +AL+Q+DV KLV +M +I+K
Sbjct: 1 MLDKLGQNISTALNKIKSATLVDKKLIKEVIKDIQKALIQSDVNVKLVLKMSKDIEKKAI 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKML--DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCT 119
++ G K+ I Q ++NEL +++ +P K P K S+I+ VG+QGSGKTT+
Sbjct: 61 EENPPKGLTKKEHIIQIVYNELVQLIGNEPQKLDLDP--SKKSIILLVGIQGSGKTTSSA 118
Query: 120 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESD-PVRIAVEGVET 178
K A QK+G KPAL+ AD +R A+ QL+Q A K +P YG T + P+ IA +G+
Sbjct: 119 KLARLIQKRGLKPALIAADVYRPAAYKQLQQLAEKINVPLYGDETRTKTPIEIAKDGLNK 178
Query: 179 FKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFK 238
KK D+ I+DT+GRHK+E+ L EM+++ + +NP ++ V+D ++GQ A +QA+AFK
Sbjct: 179 LKK--ADVFIIDTAGRHKEESGLLTEMKELKDE-LNPKEIVLVIDGTLGQQAKNQAKAFK 235
Query: 239 QSV-SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLG 297
+V +G+++VTK+DG AKGGGALSAVA +P+ FIGTGE +D+ E F+ K F+SRLLG
Sbjct: 236 DAVEDIGSILVTKLDGSAKGGGALSAVAEINAPIKFIGTGEGVDDLETFEPKKFISRLLG 295
Query: 298 MGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGF 357
MGD ++K ++V + E ++ + +G FTL +Y Q + I KMGP+ Q+ SM+PG
Sbjct: 296 MGDLDSLLEKTDDIVE-EANEEDIEAILKGKFTLVELYSQLETISKMGPMKQILSMIPGM 354
Query: 358 SSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVM 417
+ MPK ++ K+KRY +MDSMT EE NP+L+ SR+ RIARG+G + EV
Sbjct: 355 GAS-MPKEAASLTEQKLKRYKILMDSMTEEE--KENPELIKTSRMQRIARGAGAKQEEVK 411
Query: 418 EMLEEYKRLAKIWSKMKGLKIPKKG 442
E+L+ Y+ +S +K K+ K G
Sbjct: 412 ELLKYYQTTKNAFSNLKRGKMLKMG 436
>gi|312137225|ref|YP_004004562.1| signal recognition particle subunit ffh/srp54 (srp54)
[Methanothermus fervidus DSM 2088]
gi|311224944|gb|ADP77800.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Methanothermus fervidus DSM 2088]
Length = 449
Score = 357 bits (917), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 190/429 (44%), Positives = 280/429 (65%), Gaps = 11/429 (2%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L +LG + ++I++++ I+DEKV+ E + ++ RAL+QADV KLV ++ +I+K
Sbjct: 7 MLGKLGEKLRKSIKKLAKMPIVDEKVVKEVIKDLQRALIQADVNVKLVFKLSKSIEKRAL 66
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPK-KGKPSVIMFVGLQGSGKTTTCTK 120
++ G + + + ++ EL K+L GK S+ K KP I+FVGLQGSGKTTT K
Sbjct: 67 KEEPPKGITPKEHVIKIVYEELTKLL--GKKSYKLKIDKKPYKILFVGLQGSGKTTTVAK 124
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A+Y + KG+ A+VC DT+R A+DQLKQ + +P YG E +P+R+A EG+ FK
Sbjct: 125 LAHYLRLKGYNSAVVCTDTWRTAAYDQLKQLTEEINVPMYGDPNEDNPIRLAKEGLNKFK 184
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
N D+I+ DT+GRHK E L +EM +S+ +NPD +I V+D +IGQ A QA+AF +
Sbjct: 185 --NYDVILFDTAGRHKNEKELLDEMEMLSKE-INPDEIILVIDGTIGQQAKSQAKAFSER 241
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V +G++IVTK+DG AKGGGALSAV+ +P+ FIGTGE +D+ E FD F+SRLLGMGD
Sbjct: 242 VKIGSIIVTKLDGSAKGGGALSAVSEVGAPIKFIGTGEKIDDLEEFDPARFMSRLLGMGD 301
Query: 301 WSGFMDKIHEVV-PMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSS 359
++K VV D+ E + + G FTL+ + QF+ + KMGP+ Q+ +MLP +
Sbjct: 302 IKSLIEKFERVVEEEDKISETVDTMLSGKFTLKDLKTQFETMKKMGPLKQILNMLPLAGN 361
Query: 360 ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEM 419
+PK K ++ KIK+Y +MDSMT EEL+ NP+++ SR+ RIARG+G + +V E+
Sbjct: 362 --IPKNFSKITEDKIKKYCVIMDSMTEEELE--NPRIIKYSRVKRIARGAGVRNEDVREL 417
Query: 420 LEEYKRLAK 428
L YK K
Sbjct: 418 LRYYKTTKK 426
>gi|150402723|ref|YP_001330017.1| signal recognition particle protein Srp54 [Methanococcus
maripaludis C7]
gi|166222336|sp|A6VHE0.1|SRP54_METM7 RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|150033753|gb|ABR65866.1| GTP-binding signal recognition particle SRP54 G- domain
[Methanococcus maripaludis C7]
Length = 450
Score = 355 bits (911), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 192/454 (42%), Positives = 288/454 (63%), Gaps = 12/454 (2%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L +LG ++S A+ ++ NAT +D+K++ E + +I +AL+Q+DV KLV M I++
Sbjct: 1 MLDKLGQNLSEALNKIKNATFVDKKLVKEVIKDIQKALIQSDVNVKLVFNMSKEIERKAI 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
+ G +K+ I + +++EL +L K SVI+ +G+QGSGKTT+ K
Sbjct: 61 EEAPPKGLSKKEHIVKIVYDELVNLLGETTQKLELDPSKKSVILLIGIQGSGKTTSAAKL 120
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESD-PVRIAVEGVETFK 180
A Y QKKG +P L+ AD +R A+ QLKQ + K +P +G T + PV I EG+E K
Sbjct: 121 ARYIQKKGLRPGLIAADVYRPAAYQQLKQLSEKINVPLFGDETRTKTPVEITKEGMEKLK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
K D+II+DT+GRHK+E L EMR++ + T NP +I V+D ++GQ A +QA+AFK+S
Sbjct: 181 K--VDVIIIDTAGRHKEEEGLLAEMREMKDLT-NPTEIILVIDGTLGQQAKNQAKAFKES 237
Query: 241 VS-VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMG 299
VS +G+++VTK+DG AKGGGALSAVA +P+ FIGTGE +D E FD K F+SR+LGMG
Sbjct: 238 VSEIGSILVTKLDGSAKGGGALSAVAEINAPIKFIGTGEGVDNLEQFDPKKFISRILGMG 297
Query: 300 DWSGFMDKIHEVVPMDQQP-ELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFS 358
D ++K ++ MD+ E + + +G FTL +Y Q + I KMGP+ Q+ SM+PG
Sbjct: 298 DLDSLLEKTEDI--MDESTEESIDSILKGKFTLIELYAQLETISKMGPMKQILSMIPGMG 355
Query: 359 SELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVME 418
L PK + ++ K+KRY MMDSMT EE NP+L+ SR+ RIA+G+G + E+ +
Sbjct: 356 GNL-PKEAAQLTEDKLKRYKIMMDSMTMEE--KENPELIKASRLQRIAKGAGVKQEEIKD 412
Query: 419 MLEEYKRLAKIWSKMKGLKIPK-KGEMSALSRNM 451
+L+ Y + +K K+PK G+M + R +
Sbjct: 413 LLKYYSTTKNAFGNLKRGKMPKMGGQMGQIMRQL 446
>gi|159905503|ref|YP_001549165.1| signal recognition particle protein Srp54 [Methanococcus
maripaludis C6]
gi|238686963|sp|A9A9B0.1|SRP54_METM6 RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|159886996|gb|ABX01933.1| GTP-binding signal recognition particle SRP54 G- domain
[Methanococcus maripaludis C6]
Length = 450
Score = 354 bits (909), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 192/454 (42%), Positives = 288/454 (63%), Gaps = 12/454 (2%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L +LG ++S A+ ++ NAT +D+K++ E + +I +AL+Q+DV KLV M I++
Sbjct: 1 MLDKLGQNLSEALNKIKNATFVDKKLVKEVIKDIQKALIQSDVNVKLVFNMSKEIERKAI 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
+ G +K+ I + +++EL K+L K SVI+ +G+QGSGKTT+ K
Sbjct: 61 EEAPPKGLSKKEHIVKIVYDELVKLLGETIQKLELDASKKSVILLIGIQGSGKTTSAAKL 120
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESD-PVRIAVEGVETFK 180
A Y QKKG +P L+ AD +R A+ QLKQ + K +P +G T + PV I EG+E K
Sbjct: 121 ARYIQKKGLRPGLIAADVYRPAAYQQLKQLSEKINVPLFGDETRTKTPVDITKEGMEKLK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
K D+II+DT+GRHK+E L EM+++ + T NP+ +I V+D ++GQ A +QA+AFK S
Sbjct: 181 K--VDVIIIDTAGRHKEEEGLLAEMKEMKDLT-NPNEIILVIDGTLGQQAKNQAKAFKDS 237
Query: 241 VS-VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMG 299
VS +G+++VTK+DG AKGGGALSAVA +P+ FIGTGE +D E FD K F+SR+LG G
Sbjct: 238 VSEIGSILVTKLDGSAKGGGALSAVAEINAPIKFIGTGEGVDNLEQFDPKKFISRILGFG 297
Query: 300 DWSGFMDKIHEVVPMDQQP-ELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFS 358
D ++K ++ MD+ E + + +G FTL +Y Q + I KMGP+ Q+ SM+PG
Sbjct: 298 DLDSLLEKTEDI--MDESAEESIDSILKGKFTLIELYAQLETISKMGPMKQILSMIPGMG 355
Query: 359 SELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVME 418
MPK + ++ K+KRY MMDSMT EE NP+L+ SR+ RIARG+G + E+ +
Sbjct: 356 GN-MPKEAAQLTEDKLKRYKIMMDSMTMEE--KENPELIKTSRLQRIARGAGVKPEEIKD 412
Query: 419 MLEEYKRLAKIWSKMKGLKIPK-KGEMSALSRNM 451
+L+ Y + +K K+PK G+M + R +
Sbjct: 413 LLKYYSTTKNAFGNLKRGKMPKMGGQMGQIMRQL 446
>gi|402466990|gb|EJW02377.1| signal recognition particle protein SRP54 [Edhazardia aedis USNM
41457]
Length = 466
Score = 354 bits (908), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 187/446 (41%), Positives = 301/446 (67%), Gaps = 18/446 (4%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L+ +G I+ ++ + + DE + N + E+ LL A+V KL+ ++ NIKK +
Sbjct: 1 MLSDVGRKITTSLNDLFSTQNTDETIEN-VIKEVCTQLLNANVSPKLLLTLRKNIKK--D 57
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPG-KPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+++L G NK + Q I +E+ +LDPG KP KK ++++FVGLQG GKTTT K
Sbjct: 58 MENLPPGINKAKHCHQKIVSEIVNLLDPGTKPPELSKKS-VNIVLFVGLQGCGKTTTVCK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YA ++QK+ +K +VCADTFRAGAFDQ+KQNA K K+P+YGS E DPV++A +GVE F
Sbjct: 117 YANFYQKQKFKVGIVCADTFRAGAFDQIKQNALKIKVPYYGS-EEKDPVKVARKGVEKFV 175
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
E +LI++D+SGR+ QE LF+EM+Q+ A V P ++FVMD+ IGQAA QA+ F +
Sbjct: 176 NEKFNLILIDSSGRNTQEKELFDEMQQIISA-VTPTNIVFVMDAGIGQAAESQAKGFSDA 234
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
++G++I+TK+DG K GGAL++VA TK PV F+G+GE+M++F+ FDVK FV+++LG+GD
Sbjct: 235 TNIGSIILTKIDGTKKAGGALTSVATTKCPVEFVGSGENMEDFDKFDVKRFVNKMLGLGD 294
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
G ++K+ + +D++ L++K+ G FTL+ Y+QFQ I+ +GP+ + SM+PG ++
Sbjct: 295 IEGLVEKVSS-LNIDEKA-LMKKVETGTFTLKDFYDQFQQIMSLGPLQNILSMIPGMNNV 352
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMN-DSRIMRIARGSGRQVREVMEM 419
MP E++S +++ + + DS++ E++S SR++R+ARGSG + V ++
Sbjct: 353 NMP---EEDS---LRKMVCIFDSLSKNEINSDGRCFEECPSRVLRVARGSGTSYKMVYDL 406
Query: 420 LEEYKRLAKIWSKMKGLKIPKKGEMS 445
L +++++ + KM KIP G+++
Sbjct: 407 LAQFRQITGMMKKMT--KIPGFGDLA 430
>gi|429965858|gb|ELA47855.1| signal recognition particle protein SRP54 [Vavraia culicis
'floridensis']
Length = 468
Score = 351 bits (901), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 184/470 (39%), Positives = 298/470 (63%), Gaps = 18/470 (3%)
Query: 6 LGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDL 65
LG SI+ +Q + + D+ + + + +I R L+Q +V K V +++ N+ + +
Sbjct: 5 LGKSINSTLQNLFGRDVTDQAI-DAAIKDIVRQLIQNNVGTKCVTQLKINLDNKIKNEKF 63
Query: 66 AAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYH 125
G NK + + AIF+EL ++DP + K+G+ VIM VGLQG+GKTTT KYA ++
Sbjct: 64 KPGINKAKWVYNAIFDELVNLVDPKCEPYKVKRGRSQVIMLVGLQGAGKTTTVCKYANFY 123
Query: 126 QKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCD 185
+KKG+K +VCADTFRAGAFDQ+KQNA K +P++GS ++ DPV++A+EGVE FKK+ +
Sbjct: 124 KKKGYKAGIVCADTFRAGAFDQIKQNALKINVPYFGS-SDPDPVKVALEGVEKFKKDKFE 182
Query: 186 LIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGA 245
+I+VDTSGRH QE LF EM ++ A + PD ++FVMD+ IGQ+A QA FK+ V++G+
Sbjct: 183 VILVDTSGRHTQENDLFNEMEEIVNA-IAPDNIVFVMDAGIGQSAEHQAMGFKEKVNLGS 241
Query: 246 VIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFM 305
+I+TK+DG K GGA+S+VA TK P+ FIG+GE MD+ +VF K F++++LG GD G
Sbjct: 242 IILTKVDGAEKAGGAISSVAITKCPIEFIGSGEGMDDLDVFSPKRFINKILGKGDLEGLA 301
Query: 306 DKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKG 365
+KI + + +D++ E++ K+ G +TL+ Q Q ++ +GP+ +V M+PG + M
Sbjct: 302 EKIKD-LKIDEK-EIVNKIRSGKYTLKDFNLQLQQLMSLGPLSKVMEMIPGMGNFPM--- 356
Query: 366 REKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEMLEEYK 424
+ +++ + + DSMT +EL S L + +R+ RIARGSG + V++++ +++
Sbjct: 357 ---SDEGVLRKMVCIFDSMTEKELGSDGEILKREPTRVTRIARGSGTRPELVLQLVAQFE 413
Query: 425 RLAKIWSKMK------GLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
+A + K+ L +MSA + Q + LP+ ++ Q+
Sbjct: 414 MMANLMKKLGNNQGFMNLLNADTSKMSASEKAKLKQQATGFLPKNVINQM 463
>gi|365757890|gb|EHM99761.1| Srp54p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 427
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 180/370 (48%), Positives = 252/370 (68%), Gaps = 12/370 (3%)
Query: 105 MFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYT 164
MFVGLQGSGKTT+CTK A Y+ K+G+K LVCADTFRAGAFDQLKQNA +A+IPFYGSYT
Sbjct: 1 MFVGLQGSGKTTSCTKLAVYYSKRGFKVGLVCADTFRAGAFDQLKQNAIRARIPFYGSYT 60
Query: 165 ESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDS 224
E+DP ++A EG+ FKKE D+IIVDTSGRH+QE LF+EM ++S + P+ I V+D+
Sbjct: 61 ETDPAKVAEEGINKFKKEKFDIIIVDTSGRHRQEEELFQEMVEISN-VIRPNQTIMVLDA 119
Query: 225 SIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFE 284
SIGQAA Q++AFK+S GA+++TKMDGHAKGGGA+SAVAAT +P+IFIGTGEH+ + E
Sbjct: 120 SIGQAAEQQSKAFKESSDFGAILLTKMDGHAKGGGAISAVAATNTPIIFIGTGEHIHDLE 179
Query: 285 VFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKM 344
F K F+S+LLG+GD +++ V + ++ + +G FTL +Q Q I+KM
Sbjct: 180 KFSPKSFISKLLGIGDIESLFEQLQTVSNKEDAKATMENIQKGKFTLLDFKKQMQTIMKM 239
Query: 345 GPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIM 403
GP+ + M+PG S+ + G E+ SQ K+K+ + ++DSMT EEL+S + +R++
Sbjct: 240 GPLSNIAQMIPGMSNMMNQVGEEETSQ-KMKKMVYVLDSMTREELESDGRMFVEQPTRMV 298
Query: 404 RIARGSGRQVREVMEMLEEYK---RLAKIWSKMK------GLKIPKKGEMSALSRNMNAQ 454
R+A+GSG V EV +L + + R+A+ ++ + ++P M + N
Sbjct: 299 RVAKGSGTSVFEVEMILMQQQMMARMAQTATQQQPGAPGANARMPGMPNMPGMPGMPNMP 358
Query: 455 HMSKVLPQGM 464
M KV PQ M
Sbjct: 359 GMPKVTPQMM 368
>gi|150401682|ref|YP_001325448.1| signal recognition particle protein Srp54 [Methanococcus aeolicus
Nankai-3]
gi|166222333|sp|A6UWG4.1|SRP54_META3 RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|150014385|gb|ABR56836.1| GTP-binding signal recognition particle SRP54 G- domain
[Methanococcus aeolicus Nankai-3]
Length = 450
Score = 348 bits (894), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 188/445 (42%), Positives = 288/445 (64%), Gaps = 13/445 (2%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L +LG +I+ A+ ++ NAT +D+K++ E + +I +AL+QADV KLV M I++
Sbjct: 1 MLDKLGSNINNALSKIKNATFVDKKLVKEVIKDIQKALIQADVNVKLVFAMSKEIERKAI 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKML--DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCT 119
+ G +K+ I + +++EL K+L + K PK ++I+ VG+QGSGKTT+
Sbjct: 61 YESAPKGLSKKDHIIKIVYDELVKLLGEEGQKLELDPKN--KNIILLVGIQGSGKTTSAA 118
Query: 120 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESD-PVRIAVEGVET 178
K A QK+G+KPAL+ AD +R A+ QLKQ + K IP +G T++ P+ I EG++
Sbjct: 119 KLARTLQKRGFKPALIAADVYRPAAYQQLKQLSEKIHIPLHGDPTKTKTPMEITEEGLKQ 178
Query: 179 FKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFK 238
FKK D+II+DT+GRHK+E+ L EEM+++ E NP+ +I V+D ++GQ A +QA+AFK
Sbjct: 179 FKKN--DVIIIDTAGRHKEESGLLEEMKEMKE-KFNPEEIILVIDGTLGQQAKNQAKAFK 235
Query: 239 QSV-SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLG 297
+V ++G++++TKMDG AKGGGALSAVA +P+ FIGTGE +D+ E FD K F+SRLLG
Sbjct: 236 DAVENIGSILITKMDGSAKGGGALSAVAEIGAPIKFIGTGEKVDDLEPFDPKKFISRLLG 295
Query: 298 MGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGF 357
MGD ++K +++ D E L + G FTL +Y Q + I KMG + Q+ +M+PG
Sbjct: 296 MGDLDSLLEKTEDIID-DDTEESLDAMMRGKFTLNELYSQLEAISKMGSMKQLMAMIPGM 354
Query: 358 SSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVM 417
+ L PKG ++ K+K+Y +MDSMT+ E NP ++ SR+ RIA+G+G + E+
Sbjct: 355 GTNL-PKGAADITEHKLKKYKIIMDSMTSTE--KENPDIIKTSRMKRIAKGAGVKQEEIK 411
Query: 418 EMLEEYKRLAKIWSKMKGLKIPKKG 442
E+L+ Y + MK K+ K G
Sbjct: 412 ELLKYYSTTKNAFQNMKSGKMLKMG 436
>gi|440492796|gb|ELQ75334.1| Signal recognition particle, subunit Srp54 [Trachipleistophora
hominis]
Length = 468
Score = 347 bits (889), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 184/470 (39%), Positives = 297/470 (63%), Gaps = 18/470 (3%)
Query: 6 LGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDL 65
LG SI+ +Q + + D+ + + EI R L+Q +V K V +++ N+ + ++L
Sbjct: 5 LGKSINSTLQNLFKKDVTDQGI-EAAIKEIIRQLIQNNVGTKCVTQLKINLDSKLKTEEL 63
Query: 66 AAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYH 125
G NK + + AIF+EL ++DP + K+GK VIMFVGLQG+GKTTT KYA ++
Sbjct: 64 KPGINKAKWVYNAIFDELVNLVDPKCEPYKVKRGKSQVIMFVGLQGAGKTTTVCKYANFY 123
Query: 126 QKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCD 185
+KKG+K +VCADTFRAGAFDQ+KQNA K +P++GS + DPV++A EGVE F+K+ +
Sbjct: 124 KKKGYKAGIVCADTFRAGAFDQIKQNALKINVPYFGS-ADPDPVKVASEGVEKFRKDKFE 182
Query: 186 LIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGA 245
+I+VDTSGRH QE LF EM ++ A V P+ ++FVMD+ IGQ+A QA FK+ V++G+
Sbjct: 183 VILVDTSGRHTQENDLFNEMEEIVGA-VKPENIVFVMDAGIGQSAEHQAMGFKEKVNLGS 241
Query: 246 VIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFM 305
+I+TK+DG K GGA+S+VA T P+ FIG GE MD+ +VF + F++++LG GD G
Sbjct: 242 IILTKVDGAEKAGGAISSVAITGCPIEFIGNGEGMDDLDVFSPRRFINKILGKGDLEGLA 301
Query: 306 DKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKG 365
+KI + + +D++ E++ K+ G +TL+ Q Q ++ +GP+ +V M+PG + +P
Sbjct: 302 EKIKD-LKIDER-EIVNKIKSGKYTLKDFNLQLQQLMSLGPLSKVMEMIPGMGN--LPIS 357
Query: 366 REKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEMLEEYK 424
E +++ + + DSMT +EL S L + +R+ RIA+GSG + V++++ +++
Sbjct: 358 DE----GVLRKMVCIFDSMTEKELGSDGEILKKETTRVTRIAKGSGTRPELVLQLVAQFE 413
Query: 425 RLAKIWSKMK------GLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQI 468
++ + K+ L +MSA + Q + LP+ ++ Q+
Sbjct: 414 MMSNLMKKLGNNQGFMNLLNADTSKMSASEKAKLKQQATGFLPKNVINQM 463
>gi|410722282|ref|ZP_11361588.1| signal recognition particle GTPase [Methanobacterium sp. Maddingley
MBC34]
gi|410597317|gb|EKQ51944.1| signal recognition particle GTPase [Methanobacterium sp. Maddingley
MBC34]
Length = 443
Score = 344 bits (883), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 180/423 (42%), Positives = 279/423 (65%), Gaps = 7/423 (1%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L LG ++++ +++++ TIIDE+V+ E + +I RAL+Q+DV KLV + I+
Sbjct: 1 MLGNLGKNLTKTMKKLAGMTIIDEEVVKEVIKDIQRALIQSDVNIKLVLNLSKTIEDRAL 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
++ G + + + +++EL +L +K KP I+FVGLQGSGKTTT K
Sbjct: 61 NEEPPKGVTAKEHVIKIVYDELVHLLGDKAAEVEIEK-KPYKILFVGLQGSGKTTTIGKM 119
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKK 181
A Y QKKG+ PA++C DT+R A++QL+Q + YG +D + +A +G++ FKK
Sbjct: 120 ARYLQKKGFNPAIICTDTWRPAAYEQLRQLTENLNLSLYGDPNNNDALDLAQKGLKEFKK 179
Query: 182 ENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSV 241
+ DLIIVDT+GRHK+E L +EM Q+S A V PD V+ V+D +IGQ A +QA AF ++
Sbjct: 180 Q--DLIIVDTAGRHKEEKDLLDEMEQIS-AVVEPDEVMLVIDGTIGQQAKEQALAFSKTT 236
Query: 242 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 301
+G++++TK+DG AKGGGALSAV+ +P+ FIGTGE +++ EVFD + F+SRLLGMGD
Sbjct: 237 KIGSIVITKLDGSAKGGGALSAVSEIGAPIKFIGTGERIEDLEVFDPERFISRLLGMGDI 296
Query: 302 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 361
+++ E+ D E + + G FTL+ MY QF+ + KMGP+ QV +MLPG ++L
Sbjct: 297 RSLIERAEEIAEEDVDTEAMDAMLSGKFTLKDMYSQFEMMNKMGPMQQVMNMLPGMGNKL 356
Query: 362 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLE 421
PK + ++ K+ +Y +MDSMT +EL ++P+++ SR+ RIARGSG + +V E+L+
Sbjct: 357 -PKNASQVTEEKLGKYKILMDSMTEQEL--THPEIIKQSRVKRIARGSGMRNEDVKELLK 413
Query: 422 EYK 424
Y+
Sbjct: 414 YYQ 416
>gi|333988486|ref|YP_004521093.1| Signal recognition 54 kDa protein [Methanobacterium sp. SWAN-1]
gi|333826630|gb|AEG19292.1| Signal recognition 54 kDa protein [Methanobacterium sp. SWAN-1]
Length = 443
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 179/422 (42%), Positives = 273/422 (64%), Gaps = 7/422 (1%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L LG +++ +++++ +IID++V+ E + +I RAL+Q+DV KLV + I+
Sbjct: 1 MLDNLGKNLTNTMKKLAGMSIIDKEVVKEVIKDIQRALIQSDVNIKLVLNLSKTIEDRAL 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
++ G + + + ++ EL ++ K KP I+FVGLQGSGKTTT K
Sbjct: 61 NEEPPKGVTPKEHVIKIVYEELVNLVGEKAQEVEIDK-KPYKILFVGLQGSGKTTTIGKI 119
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKK 181
+ Y QKKG+ PA++C DT+R A++QL+Q +P YG D + +A +G+ FKK
Sbjct: 120 SRYLQKKGFNPAIICTDTWRPAAYEQLRQLTENMNLPLYGDPENKDALDLAKKGLNEFKK 179
Query: 182 ENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSV 241
+ DLIIVDT+GRHK+E L +EM ++S A V PD VI V+D +IGQ A +QA AF ++
Sbjct: 180 Q--DLIIVDTAGRHKEEKDLLDEMEEIS-AIVKPDEVILVIDGTIGQQAREQALAFSKTT 236
Query: 242 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 301
+G++I+TK+DG AKGGGALSAVA +P+ FIGTGE +D+FE FD + F+SRLLGMGD
Sbjct: 237 KIGSIIITKLDGSAKGGGALSAVAEIGAPIKFIGTGERVDDFEAFDPERFISRLLGMGDI 296
Query: 302 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 361
++K E+ D + + + G FTL+ MY QF+ + KMGP+ QV +M+PG S+L
Sbjct: 297 RSLIEKAEEIAKDDIDMDSVDAMMSGKFTLKDMYSQFEMMNKMGPMKQVMNMIPGMGSKL 356
Query: 362 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLE 421
PK + ++ K+ +Y +MDSMT EL+ +P+++ SR+ RIARGSG + +V E+++
Sbjct: 357 -PKNASQMTEEKLGKYKILMDSMTEYELE--HPEVIKQSRVKRIARGSGMRNEDVKELMK 413
Query: 422 EY 423
Y
Sbjct: 414 YY 415
>gi|408380979|ref|ZP_11178529.1| signal recognition particle protein Srp54 [Methanobacterium
formicicum DSM 3637]
gi|407816244|gb|EKF86806.1| signal recognition particle protein Srp54 [Methanobacterium
formicicum DSM 3637]
Length = 443
Score = 343 bits (880), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 182/423 (43%), Positives = 274/423 (64%), Gaps = 7/423 (1%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L LG +++ +++++ TIIDE+V+ E + +I RAL+Q+DV KLV + I+
Sbjct: 1 MLGNLGKNLTNTMKKLAGMTIIDEEVVKEVIKDIQRALIQSDVNIKLVLNLSKTIEDRAL 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
+ G + + + ++ EL +L K KP I+FVGLQGSGKTTT K
Sbjct: 61 NEKPPKGVTAKEHVIKIVYEELVHLLGDKAAEVEIDK-KPYKILFVGLQGSGKTTTIGKM 119
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKK 181
A Y QKKG+ PAL+C DT+R A++QL+Q + YG D + +A +G++ FKK
Sbjct: 120 AKYLQKKGFNPALICTDTWRPAAYEQLRQLTESLNLSLYGDPNNKDALDLARKGLKEFKK 179
Query: 182 ENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSV 241
+ DLIIVDT+GRHK+E L +EM Q+S A V PD V+ V+D +IGQ A +QA AF ++
Sbjct: 180 Q--DLIIVDTAGRHKEEKDLLDEMEQIS-AVVEPDEVMLVIDGTIGQQAKEQALAFSKTT 236
Query: 242 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 301
+G++++TK+DG AKGGGALSAVA +P+ FIGTGE +++ EVFD + F+SRLLGMGD
Sbjct: 237 KIGSIVITKLDGSAKGGGALSAVAEIGAPIKFIGTGERIEDLEVFDPERFISRLLGMGDI 296
Query: 302 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 361
+++ E+ D E + + G FTL+ MY QF+ + KMGP+ QV +MLPG ++L
Sbjct: 297 RSLIERAEEIAEEDVDAEAMDAMLSGKFTLKDMYSQFEMMNKMGPMQQVMNMLPGMGNKL 356
Query: 362 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLE 421
PK + ++ K+ +Y +MDSMT +EL ++P+++ SR+ RIARGSG + +V E+L+
Sbjct: 357 -PKNASQVTEEKLSKYKILMDSMTEQEL--THPEIIKQSRVKRIARGSGMRNEDVKELLK 413
Query: 422 EYK 424
Y+
Sbjct: 414 YYQ 416
>gi|45359114|ref|NP_988671.1| signal recognition particle protein Srp54 [Methanococcus
maripaludis S2]
gi|74579561|sp|Q6LX03.1|SRP54_METMP RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|45047989|emb|CAF31107.1| signal recognition particle protein SRP54 [Methanococcus
maripaludis S2]
Length = 450
Score = 342 bits (877), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 192/454 (42%), Positives = 291/454 (64%), Gaps = 12/454 (2%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L +LG ++S A+ ++ NAT +D+K++ E + +I +AL+Q+DV KLV M I++
Sbjct: 1 MLDKLGQNLSDALNKLKNATFVDKKLVKEVIKDIQKALIQSDVNVKLVFNMSKEIERKAI 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
+ G +K+ I + +++EL K+L K SVI+ +G+QGSGKTT+ K
Sbjct: 61 DEAPPKGLSKKEHIVKIVYDELVKLLGETTQKLELDPSKKSVILLIGIQGSGKTTSAAKL 120
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESD-PVRIAVEGVETFK 180
A Y QKKG +P L+ AD +R A+ QLKQ + K +P +G T + PV I EG+E K
Sbjct: 121 ARYIQKKGLRPGLIAADVYRPAAYQQLKQLSEKINVPLFGDETRTKTPVEITKEGMEKLK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
K D+II+DT+GRHK+E L EM+++ + T NP+ +I V+D ++GQ A +QA+AFK+S
Sbjct: 181 K--VDVIIIDTAGRHKEEEGLLAEMKEMKDLT-NPNEIILVIDGTLGQQAKNQAKAFKES 237
Query: 241 VS-VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMG 299
VS +G+++VTK+DG AKGGGALSAVA +P+ FIGTGE +D E FD K F+SR+LG+G
Sbjct: 238 VSEIGSILVTKLDGSAKGGGALSAVAEINAPIKFIGTGEGVDNLEQFDPKKFISRILGLG 297
Query: 300 DWSGFMDKIHEVVPMDQQP-ELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFS 358
D ++K ++ MD+ E + + +G FTL +Y Q + I KMGP+ Q+ SM+PG
Sbjct: 298 DLDSLLEKTEDI--MDESTEESIDSILKGKFTLIELYAQLETISKMGPMKQILSMIPGMG 355
Query: 359 SELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVME 418
MPK + ++AK+KRY MMDSMT EE NP+L+ SR+ RIA+G+G + E+ +
Sbjct: 356 GN-MPKEAAQLTEAKLKRYKIMMDSMTMEE--KENPELIKTSRLQRIAKGAGVKQEEIKD 412
Query: 419 MLEEYKRLAKIWSKMKGLKIPK-KGEMSALSRNM 451
+L+ Y + +K K+PK G+M + R +
Sbjct: 413 LLKYYSTTKNAFGNLKRGKMPKMGGQMGQIMRQL 446
>gi|304315442|ref|YP_003850589.1| signal recognition particle protein Srp54 [Methanothermobacter
marburgensis str. Marburg]
gi|302588901|gb|ADL59276.1| signal recognition particle protein Srp54 [Methanothermobacter
marburgensis str. Marburg]
Length = 442
Score = 342 bits (877), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 190/436 (43%), Positives = 279/436 (63%), Gaps = 13/436 (2%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L LG S+S+ +++++ TI+DE+V+ E + +I RAL+Q+DV KLV + +I++
Sbjct: 1 MLGNLGRSLSKTMKKLAGMTIVDEEVVKEVIKDIQRALIQSDVNIKLVFNLSKSIEERAL 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPK-KGKPSVIMFVGLQGSGKTTTCTK 120
++ G + I ++ E+ K+L G+ S K + KP I+F+GLQGSGKTTT K
Sbjct: 61 NEEPPKGITPKEHIISIVYEEMVKLL--GERSHELKIEEKPYRILFLGLQGSGKTTTIGK 118
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A Y +KKG+ +VC DT+R AF+QLKQ I YG D + +A +G+E F+
Sbjct: 119 LARYLRKKGFTVGVVCTDTWRPAAFEQLKQYTEGQDISVYGDPENKDALDLAEKGLERFQ 178
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
K+ D+II DT+GRHK+E L EM ++S A + P I V+D +IGQ A +QA AF+++
Sbjct: 179 KK--DVIIFDTAGRHKEEKDLLREMEELS-AVIKPHEAILVIDGTIGQQAREQALAFREA 235
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
+G++IVTK+DG AKGGGALSAVA +P+ FIGTGE +D+ EVFD + F+SRLLGMGD
Sbjct: 236 TDIGSIIVTKLDGSAKGGGALSAVAEIGAPIRFIGTGERIDDLEVFDPERFISRLLGMGD 295
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
++K+ EV + E L + G FTL+ M QF+ + KMGP+ QV +MLPG
Sbjct: 296 LKSLLEKVEEVSDEELAEESLDAILSGKFTLKDMRVQFEMMGKMGPLQQVMNMLPGVGK- 354
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEML 420
+PK K ++ I++Y+ +MDSMT EEL+ P ++ SRI RI+RGSG + +V E+L
Sbjct: 355 -LPKDATKMTEETIRKYLIIMDSMTEEELE--KPDIIKQSRIRRISRGSGTRNEDVKELL 411
Query: 421 EEYKRLAKIWSKMKGL 436
+ Y+ K MKGL
Sbjct: 412 KYYRVTRK---AMKGL 424
>gi|431907352|gb|ELK11325.1| Signal recognition particle 54 kDa protein [Pteropus alecto]
Length = 438
Score = 342 bits (877), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 172/302 (56%), Positives = 229/302 (75%), Gaps = 9/302 (2%)
Query: 162 SYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFV 221
+YTE DPV IA EGVE FK EN ++IIVDTSGRHKQE +LFEEM QV+ A + PD +++V
Sbjct: 57 NYTEMDPVIIASEGVEKFKNENFEIIIVDTSGRHKQEDSLFEEMLQVANA-IQPDNIVYV 115
Query: 222 MDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMD 281
MD+SIGQA QA+AFK V V +VIVTK+DGHAKGGGALSAVAATKSP+IFIGTGEH+D
Sbjct: 116 MDASIGQACEAQAKAFKDKVDVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHID 175
Query: 282 EFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNI 341
+FE F +PF+S+LLGMGD G +DK++E + +D L++KL G FTLR MYEQFQNI
Sbjct: 176 DFEPFKTQPFISKLLGMGDIEGLIDKVNE-LKLDDNEALIEKLKHGQFTLRDMYEQFQNI 234
Query: 342 LKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMNDS 400
+KMGP Q+ M+PGF ++ M KG E+ES A++K+ MT+MDSM ++ELDS++ K+ +
Sbjct: 235 MKMGPFSQILGMIPGFGTDFMSKGNEQESMARLKKLMTIMDSMNDQELDSTDGAKVFSKQ 294
Query: 401 --RIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNAQHMS 457
RI R+ARGSG R+V E+L +Y + A++ KM G+K + K G+M S+N++ M+
Sbjct: 295 PGRIQRVARGSGVSTRDVQELLTQYTKFAQMVKKMGGIKGLFKGGDM---SKNVSQSQMA 351
Query: 458 KV 459
K+
Sbjct: 352 KL 353
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 43/56 (76%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNI 56
MVLA LG I+ A++ +SNATII+E+VLN L E+ ALL+ADV KLV++++ N+
Sbjct: 1 MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENV 56
>gi|395504261|ref|XP_003756474.1| PREDICTED: signal recognition particle 54 kDa protein, partial
[Sarcophilus harrisii]
Length = 418
Score = 342 bits (876), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 176/308 (57%), Positives = 231/308 (75%), Gaps = 10/308 (3%)
Query: 163 YTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVM 222
YTE DPV IA EGVE FK EN ++IIVDTSGRHKQE +LFEEM QV+ A + PD +++VM
Sbjct: 1 YTEMDPVIIASEGVEKFKNENFEIIIVDTSGRHKQEDSLFEEMLQVANA-IQPDNIVYVM 59
Query: 223 DSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDE 282
D+SIGQA QA+AFK V V +VIVTK+DGHAKGGGALSAVAATKSP+IFIGTGEH+D+
Sbjct: 60 DASIGQACEAQAKAFKDKVDVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDD 119
Query: 283 FEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNIL 342
FE F +PF+S+LLGMGD G +DK++E + +D L++KL G FTLR MYEQFQNI+
Sbjct: 120 FEPFKTQPFISKLLGMGDIEGLIDKVNE-LKLDDNEALIEKLKHGQFTLRDMYEQFQNIM 178
Query: 343 KMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMNDS- 400
KMGP Q+ M+PGF ++ M KG E+ES A++K+ MT+MDSM ++ELDS++ K+ +
Sbjct: 179 KMGPFSQILGMIPGFGTDFMSKGNEQESMARLKKLMTIMDSMNDQELDSTDGAKVFSKQP 238
Query: 401 -RIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSK 458
RI R+ARGSG R+V E+L +Y + A++ KM G+K + K G+M S+N++ M+K
Sbjct: 239 GRIQRVARGSGVSTRDVQELLTQYTKFAQMVKKMGGIKGLFKGGDM---SKNVSQSQMAK 295
Query: 459 VLPQGMLK 466
L Q M K
Sbjct: 296 -LNQQMAK 302
>gi|340624864|ref|YP_004743317.1| signal recognition particle protein Srp54 [Methanococcus
maripaludis X1]
gi|339905132|gb|AEK20574.1| signal recognition particle protein Srp54 [Methanococcus
maripaludis X1]
Length = 450
Score = 339 bits (869), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 190/454 (41%), Positives = 290/454 (63%), Gaps = 12/454 (2%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L +LG ++S A+ ++ NAT +D+K++ E + +I +AL+Q+DV KLV M I++
Sbjct: 1 MLDKLGQNLSDALNKLKNATFVDKKLVKEVIKDIQKALIQSDVNVKLVFNMSKEIERKAI 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
+ G +K+ I + +++EL K+L K SVI+ +G+QGSGKTT+ K
Sbjct: 61 EEAPPKGLSKKEHIVKIVYDELVKLLGETTQKLELDPSKKSVILLIGIQGSGKTTSAAKL 120
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESD-PVRIAVEGVETFK 180
A Y QKKG +P L+ AD +R A+ QLKQ + K +P +G T + PV I EG+E K
Sbjct: 121 ARYIQKKGLRPGLIAADVYRPAAYQQLKQLSEKINVPLFGDETRTKTPVEITKEGMEKLK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
K D++I+DT+GRHK+E L EM+++ + T NP+ +I V+D ++GQ A +QA+AFK+S
Sbjct: 181 K--VDVVIIDTAGRHKEEEGLLAEMKEMKDLT-NPNEIILVIDGTLGQQAKNQAKAFKES 237
Query: 241 VS-VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMG 299
VS +G+++VTK+DG AKGGGALSAVA +P+ FIGTGE +D E FD K F+SR+LG+G
Sbjct: 238 VSEIGSILVTKLDGSAKGGGALSAVAEINAPIKFIGTGEGVDNLEQFDPKKFISRILGLG 297
Query: 300 DWSGFMDKIHEVVPMDQQP-ELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFS 358
D ++K ++ MD+ E + + +G FTL +Y Q + I KMGP+ Q+ SM+PG
Sbjct: 298 DLDSLLEKTEDI--MDESTEESIDSILKGKFTLIELYAQLETISKMGPMKQILSMIPGMG 355
Query: 359 SELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVME 418
MPK + ++ K+KRY MMDSMT EE NP+L+ SR+ RIA+G+G + E+ +
Sbjct: 356 GN-MPKEAAQLTEDKLKRYKIMMDSMTMEE--KENPELIKTSRLQRIAKGAGVKQEEIKD 412
Query: 419 MLEEYKRLAKIWSKMKGLKIPK-KGEMSALSRNM 451
+L+ Y + +K K+PK G+M + R +
Sbjct: 413 LLKYYSTTKNAFGNLKRGKMPKMGGQMGQIMRQL 446
>gi|320100244|ref|YP_004175836.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Desulfurococcus mucosus DSM 2162]
gi|319752596|gb|ADV64354.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Desulfurococcus mucosus DSM 2162]
Length = 450
Score = 339 bits (869), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 177/411 (43%), Positives = 275/411 (66%), Gaps = 6/411 (1%)
Query: 25 EKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELC 84
EK ++E + E+ + L++ADV KL E+ + IK+ + G +++ ++ EL
Sbjct: 20 EKAVDEFIRELQKELVRADVNLKLAMELTSRIKERALKAEPPPGISRKEWFITVVYEELT 79
Query: 85 KMLD-PGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAG 143
++L KPS P K KP VIM VGLQGSGKTTT K AY+++ +G + LV ADTFR
Sbjct: 80 RLLGGERKPSVKPAK-KPWVIMLVGLQGSGKTTTTAKLAYFYKLEGLRVGLVAADTFRPA 138
Query: 144 AFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFE 203
A+ QLKQ + +P YG SD V IAV+GVE F++ D+II+DT+GRH +E L E
Sbjct: 139 AYMQLKQLGEQVGVPVYGEPGNSDAVAIAVKGVEFFRERKMDVIIIDTAGRHHREEDLLE 198
Query: 204 EMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSA 263
EM+++SE V PD V+ V+D++IGQ AF+ A+ F ++ +G++IVTK+DG AKGGGALSA
Sbjct: 199 EMKKMSE-HVKPDEVMLVIDAAIGQQAFNIARRFHEATPIGSIIVTKLDGTAKGGGALSA 257
Query: 264 VAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQK 323
VAAT + + FIGTGE +DE EVF+ FVSR+LG+GD ++K+ V +D E ++
Sbjct: 258 VAATGASIKFIGTGEKIDELEVFNPPRFVSRILGLGDIESLIEKVRR-VQLDFTEEDARR 316
Query: 324 LSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDS 383
L EG +R++Y+Q ++ KMGP+G++ M+PG ++ + K+ + K+ +++ +++S
Sbjct: 317 LIEGKVNMRLVYKQLVSLRKMGPLGKIMQMIPGLGVKIPFEVDSKQLEEKMSKWLAIINS 376
Query: 384 MTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMK 434
MT EELD NP +++ SR+ RIARG+G +V +V E+L++Y+ + K+ +++
Sbjct: 377 MTYEELD--NPDIIDRSRMKRIARGAGVEVEDVKELLKQYELVKKLSKQLR 425
>gi|255636768|gb|ACU18718.1| unknown [Glycine max]
Length = 175
Score = 338 bits (867), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 156/175 (89%), Positives = 170/175 (97%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LGGSISRA+QQMSNATIIDEKVLN+CLN+ITRALLQ+DVQFKLVR+MQTNIK IV
Sbjct: 1 MVLAELGGSISRALQQMSNATIIDEKVLNDCLNDITRALLQSDVQFKLVRDMQTNIKNIV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NL+DLAAGHNKRRIIQQA+FNELCK+LDPGKPSFTPKKGK SV+MFVGLQGSGKTTTCTK
Sbjct: 61 NLEDLAAGHNKRRIIQQAVFNELCKILDPGKPSFTPKKGKTSVVMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEG 175
YA+YHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSY ESDPV++ +G
Sbjct: 121 YAFYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKLLWKG 175
>gi|134045071|ref|YP_001096557.1| signal recognition particle protein Srp54 [Methanococcus
maripaludis C5]
gi|166222335|sp|A4FVX4.1|SRP54_METM5 RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|132662696|gb|ABO34342.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Methanococcus maripaludis C5]
Length = 450
Score = 338 bits (867), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 191/454 (42%), Positives = 291/454 (64%), Gaps = 12/454 (2%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L +LG ++S A+ ++ NAT +D+K++ E + +I +AL+Q+DV KLV M I++
Sbjct: 1 MLDKLGQNLSDALNKIKNATFVDKKLVKEVIKDIQKALIQSDVNVKLVFNMSKEIERKAI 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
+ G +K+ I + +++EL K+L K SVI+ +G+QGSGKTT+ K
Sbjct: 61 EEAPPKGLSKKEHIVKIVYDELVKLLGETTQKLELDPSKKSVILLIGIQGSGKTTSAAKL 120
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESD-PVRIAVEGVETFK 180
A Y QKKG +P L+ AD +R A+ QLKQ + K +P +G T + PV I EG+E K
Sbjct: 121 ARYIQKKGLRPGLIAADVYRPAAYQQLKQLSEKINVPLFGDETRTKTPVDITKEGMEKLK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
K D+II+DT+GRHK+E +L EM+++ + T NP+ +I V+D ++GQ A +QA+AFK+S
Sbjct: 181 K--VDVIIIDTAGRHKEEESLLAEMKEMKDLT-NPNEIILVIDGTLGQQAKNQAKAFKES 237
Query: 241 VS-VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMG 299
VS +G+++VTK+DG AKGGGALSAVA +P+ FIGTGE +D E FD K F+SR+LG+G
Sbjct: 238 VSEIGSILVTKLDGSAKGGGALSAVAEINAPIKFIGTGEGVDNLEQFDPKKFISRILGLG 297
Query: 300 DWSGFMDKIHEVVPMDQQP-ELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFS 358
D ++K ++ MD+ E + + +G FTL +Y Q + I KMGP+ Q+ SM+PG
Sbjct: 298 DLDSLLEKTEDI--MDESTEESIDSILKGKFTLIELYAQLETISKMGPMKQILSMIPGMG 355
Query: 359 SELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVME 418
L PK + ++ K+KRY MMDSMT EE NP+L+ SR+ RIA+G+G + E+ +
Sbjct: 356 GNL-PKEAAQLTEDKLKRYKIMMDSMTLEE--KENPELIKTSRLQRIAKGAGVKQDEIKD 412
Query: 419 MLEEYKRLAKIWSKMKGLKIPK-KGEMSALSRNM 451
+L+ Y + +K K+PK G+M + R +
Sbjct: 413 LLKYYSTTKNAFGNLKRGKMPKMGGQMGQIMRQL 446
>gi|91772216|ref|YP_564908.1| signal recognition particle protein Srp54 [Methanococcoides
burtonii DSM 6242]
gi|121686981|sp|Q12ZG8.1|SRP54_METBU RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|91711231|gb|ABE51158.1| signal recognition particle SRP54 [Methanococcoides burtonii DSM
6242]
Length = 439
Score = 337 bits (865), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 190/439 (43%), Positives = 271/439 (61%), Gaps = 17/439 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MV+ +LG S+ A++++ A IDEK + E + +I RALLQADV KLV +M ++IK+
Sbjct: 1 MVMDKLGSSLQDALKKLVGAGRIDEKTVTEVVKDIQRALLQADVNVKLVMQMSSHIKERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+++ G N R + + ++ EL ++ G+ + P K P IM +GLQGSGKTTT +K
Sbjct: 61 LKEEVPPGMNPREHVIKIVYQELISIV--GRSADIPLK--PQTIMMIGLQGSGKTTTTSK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
+ Y Q+KG KPA++CADTFR GA+ QLK K +PFYG D V I G+
Sbjct: 117 LSRYFQRKGLKPAVICADTFRPGAYQQLKTLCDKLNVPFYGEVGNPDAVGIVERGLAELG 176
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
K D++IVDT+GRH EA L +EM Q+ E PD + V+D +IGQ A +QA+AF S
Sbjct: 177 KN--DVLIVDTAGRHSLEADLIDEMEQIHE-IAQPDYKLLVLDGAIGQQASEQARAFNDS 233
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V + V+++K+DG AKGGGALSAV+ T S + FIG GE D+ E F+ F+SRLLGMGD
Sbjct: 234 VGISGVVISKLDGTAKGGGALSAVSETNSAIAFIGVGETPDDLEKFEPDRFISRLLGMGD 293
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLP--GFS 358
++K E + ++ ++ + G FTL+ MY Q + + KMGP+ Q+ MLP G
Sbjct: 294 IKSLIEKAEET--LSEEDIDMEAMMRGRFTLKDMYSQLEAMNKMGPMKQIMQMLPLGGMG 351
Query: 359 SELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVME 418
++L K ++ K+K Y +MDSMT EEL NP+L+ SRI RI+ GSG V E
Sbjct: 352 AKLSDDAY-KVTEDKMKGYRVLMDSMTEEEL--LNPRLLGSSRIKRISLGSGSSPDAVRE 408
Query: 419 MLEEYKRLAKIWSKMKGLK 437
+L+ YK + + MKGL+
Sbjct: 409 LLKYYKMM---QNAMKGLR 424
>gi|336476226|ref|YP_004615367.1| GTP-binding signal recognition particle SRP54 G- domain-containing
protein [Methanosalsum zhilinae DSM 4017]
gi|335929607|gb|AEH60148.1| GTP-binding signal recognition particle SRP54 G- domain protein
[Methanosalsum zhilinae DSM 4017]
Length = 439
Score = 335 bits (860), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 185/439 (42%), Positives = 276/439 (62%), Gaps = 14/439 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MV+ +LG S+ AI+++ ++ IDEK +N+ + +I RALLQ+DV K+V M +IK+
Sbjct: 1 MVMDKLGSSLQDAIKKLVSSGRIDEKTVNDVVKDIQRALLQSDVNVKMVMTMSKHIKERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+++ G N R + + ++ EL ++ GK + P K P IM +GLQGSGKTTT +K
Sbjct: 61 LKEEVPKGMNPREHVIRIVYQELTSII--GKGTDIPLK--PQKIMMIGLQGSGKTTTTSK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A Y QKKG +PA++CADTFR GA+ QLK + + FYG D V I G++ F
Sbjct: 117 LARYFQKKGLRPAVICADTFRPGAYQQLKTLCERLNVAFYGEEGNEDAVGIVKRGLKEF- 175
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
E D+ I+DT+GRH E L +EM + A +PD + V+D++IGQ A +QA+AF +S
Sbjct: 176 -EKYDIKIIDTAGRHALEKDLIKEMEDI-HAICDPDYKLLVLDAAIGQQASEQARAFNES 233
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
+ + VI+TK+DG AKGGGALSAV+ T S + FIGTGE ++ E F+ F+SRLLGMGD
Sbjct: 234 IGISGVIITKLDGTAKGGGALSAVSETNSSIAFIGTGETPEDLEKFEPDRFISRLLGMGD 293
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLP--GFS 358
++K E + D+ ++ + +G FTL+ MY+Q + + KMGP+ Q+ MLP G
Sbjct: 294 IKTLLEKAEESLDKDELD--MEAMMKGRFTLKDMYKQMEALNKMGPMKQIMQMLPLGGLG 351
Query: 359 SELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVME 418
+++ P+ + + K+ RY +MDSMT EE+ NP+L+ SRI RI+RGSG +V E
Sbjct: 352 AKI-PEDAYQVTGDKLTRYRIIMDSMTEEEM--LNPRLIGSSRIKRISRGSGNSPEDVRE 408
Query: 419 MLEEYKRLAKIWSKMKGLK 437
+L+ +K + M+G K
Sbjct: 409 LLKYHKMMQNAMKGMRGGK 427
>gi|444722487|gb|ELW63179.1| Signal recognition particle 54 kDa protein [Tupaia chinensis]
Length = 594
Score = 335 bits (859), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 165/279 (59%), Positives = 215/279 (77%), Gaps = 5/279 (1%)
Query: 162 SYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFV 221
+YTE DPV IA EGVE FK EN ++IIVDTSGRHKQE +LFEEM QV+ A + PD +++V
Sbjct: 57 NYTEMDPVIIASEGVEKFKNENFEIIIVDTSGRHKQEDSLFEEMLQVANA-IQPDNIVYV 115
Query: 222 MDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMD 281
MD+SIGQA QA+AFK V V +VIVTK+DGHAKGGGALSAVAATKSP+IFIGTGEH+D
Sbjct: 116 MDASIGQACEAQAKAFKDKVDVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHID 175
Query: 282 EFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNI 341
+FE F +PF+S+LLGMGD G +DK++E + +D L++KL G FTLR MYEQFQNI
Sbjct: 176 DFEPFKTQPFISKLLGMGDIEGLIDKVNE-LKLDDNEALIEKLKHGQFTLRDMYEQFQNI 234
Query: 342 LKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSN-PKLMNDS 400
+KMGP Q+ M+PGF ++ M KG E+ES A++K+ MT+MDSM ++ELDS++ K+ +
Sbjct: 235 MKMGPFSQILGMIPGFGTDFMSKGNEQESMARLKKLMTIMDSMNDQELDSTDGAKVFSKQ 294
Query: 401 --RIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLK 437
RI R+ARGSG R+V E+L +Y + A++ KM G+K
Sbjct: 295 PGRIQRVARGSGVSTRDVQELLTQYTKFAQMVKKMGGIK 333
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 43/56 (76%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNI 56
MVLA LG I+ A++ +SNATII+E+VLN L E+ ALL+ADV KLV++++ N+
Sbjct: 1 MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENV 56
>gi|298675575|ref|YP_003727325.1| GTP-binding signal recognition particle SRP54 G- domain-containing
protein [Methanohalobium evestigatum Z-7303]
gi|298288563|gb|ADI74529.1| GTP-binding signal recognition particle SRP54 G- domain protein
[Methanohalobium evestigatum Z-7303]
Length = 440
Score = 335 bits (858), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 181/435 (41%), Positives = 273/435 (62%), Gaps = 11/435 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MV+ +LG S+ A++++ N+ IDEK +N+ + +I RALLQADV +LV M IK+
Sbjct: 1 MVMDKLGSSLQDALKKLVNSGRIDEKSVNDVVKDIQRALLQADVNVQLVMNMSKQIKERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+++ +G N R + + ++ EL ++ G T +P IM +GLQGSGKTTT +K
Sbjct: 61 LKEEVPSGMNPREHVIRIVYQELINIIGEG----TEINLEPQTIMMIGLQGSGKTTTTSK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A Y QKKG KPA++CADTFR GA+ QLK K IPFYG D + I G++
Sbjct: 117 LARYFQKKGLKPAVICADTFRPGAYHQLKSLCDKNSIPFYGEEGNEDSLGIVERGMDKLG 176
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
K D++I+DT+GRH E L EEM Q++ + PD + V+D++IGQ A +QA+AF +S
Sbjct: 177 K--YDVLIIDTAGRHSLEQDLIEEMEQIN-SIAKPDKKLLVLDAAIGQQASEQARAFNES 233
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
+ + V++TK+DG AKGGGALSAV+ T S + FIG GE + E F+ F+SRLLGMGD
Sbjct: 234 IGISGVVITKLDGTAKGGGALSAVSETNSSIAFIGVGETSGDLEKFEPDRFISRLLGMGD 293
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
++K E + ++ ++ + +G FTL+ MY+Q + + KMGP+ QV M+PG +
Sbjct: 294 IRSLIEKAEESLSEEELD--VESMMQGRFTLKDMYKQLEAVNKMGPLKQVMQMMPGGMGQ 351
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEML 420
+ + + + + K+ RY +MDSMT +E+D +PKL+ SRI RI+RGSG + +V E+L
Sbjct: 352 NISEEQFQVTSEKLSRYRIIMDSMTVDEMD--DPKLIGSSRIKRISRGSGSKPDDVRELL 409
Query: 421 EEYKRLAKIWSKMKG 435
+ +K + +G
Sbjct: 410 KYHKTMQNAMKNFRG 424
>gi|116753684|ref|YP_842802.1| signal recognition particle protein Srp54 [Methanosaeta thermophila
PT]
gi|121693787|sp|A0B638.1|SRP54_METTP RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|116665135|gb|ABK14162.1| signal recognition particle subunit FFH/SRP54 (srp54) [Methanosaeta
thermophila PT]
Length = 444
Score = 334 bits (856), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 191/438 (43%), Positives = 276/438 (63%), Gaps = 16/438 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LGGS+ A++++++AT +D+ ++++ + +I RALLQADV KLV + I++
Sbjct: 1 MVLDNLGGSLRGALKKIASATRVDKALVDDAVRDIQRALLQADVNVKLVMSLSNRIRERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ AG N R + ++ EL ++ G+ + P K IM VGLQGSGKTTT K
Sbjct: 61 LNEKPPAGMNPREHVINIVYQELINLI--GRGTDIPLK--KQTIMLVGLQGSGKTTTAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A Y Q++G + A++CADTFRAGA+DQLK + I FYG + +A G+E K
Sbjct: 117 LATYFQRRGLRTAVICADTFRAGAYDQLKALCDRQGIFFYGEKGNENAPEVAKNGLEATK 176
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
K D+ IVDT+GRH E+ L +EM+ + A VN D + VMD++IGQ A +QA+AF ++
Sbjct: 177 K--YDVRIVDTAGRHALESDLIQEMKDI-HAVVNADHKLLVMDAAIGQQASEQARAFNEA 233
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V + VI+TK+DG AKGGGALSAVA TK+ V FIG GE + E F+ F+SRLLGMGD
Sbjct: 234 VGITGVIITKLDGTAKGGGALSAVAETKTSVAFIGVGETASDLEKFEADRFISRLLGMGD 293
Query: 301 WSGFMDKIHEV-VPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLP--GF 357
G ++K EV + D + + K G FTL+ MY+Q + + KMGP+ Q+ MLP G
Sbjct: 294 IKGLIEKAQEVQIESDVDVDAMMK---GKFTLKDMYKQLEAMNKMGPLKQIMQMLPFGGI 350
Query: 358 SSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVM 417
EL K + ++ +++ Y +MDSMT+EEL+ +PK++N SRI RIARGSG + V
Sbjct: 351 GIELSDK-EYQVTKERLEAYRFIMDSMTDEELE--DPKIINASRIKRIARGSGTRPELVK 407
Query: 418 EMLEEYKRLAKIWSKMKG 435
E+L+ + + K M+G
Sbjct: 408 ELLKSHAAMQKAIKGMRG 425
>gi|145494914|ref|XP_001433451.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124400568|emb|CAK66054.1| unnamed protein product [Paramecium tetraurelia]
Length = 436
Score = 334 bits (856), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 183/431 (42%), Positives = 273/431 (63%), Gaps = 16/431 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL +LG SI + +++ I+E V+++ LNEI+ AL + DV L++E++ NI+
Sbjct: 1 MVLTELGQSIKGVLNKLNQPQQINEVVVDQILNEISIALQKTDVNESLIQELRENIRLEF 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
L L N +R++Q++I EL K+L SF PKKG+P+V+M +GL+GSGKT+TC K
Sbjct: 61 KLH-LLEFINLQRLLQKSIIEELTKLLQNDIMSFQPKKGQPNVMMLIGLKGSGKTSTCFK 119
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YAYY QK+GWK ++CA + + D +KQ A K K+ FYGSY ESDPV +GV+ FK
Sbjct: 120 YAYYFQKRGWKVGIICAGSSQLQEIDWVKQQAKKIKVLFYGSYFESDPVNATQDGVQIFK 179
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
KE D+I++DT G++++E L +EM+Q+ E + PD +IFVMDSSIGQ DQ FK +
Sbjct: 180 KEGIDIILIDTVGKYEKETDLCKEMKQM-EYMIQPDNIIFVMDSSIGQICQDQVFVFKSA 238
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
+ G++I+TK+D H+KGGGA+SAV AT +P+ FI GE ++ F F+S+LLG D
Sbjct: 239 FNQGSIIITKVDRHSKGGGAISAVVATNTPIDFICNGEGHEDLLEFQSSQFISKLLGFED 298
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFS-MLPGFSS 359
G ++K++ V + + E FTLR + + + +LK G I FS L G S
Sbjct: 299 LKGLLNKLNSFVSIGPK--------EKQFTLRDLESEVKKLLKFGSINYFFSKCLMGIPS 350
Query: 360 ELMPKGREKESQAKIKRYMTMMDSMTNEELDS--SNPKLMNDSRIMRIARGSGRQVREVM 417
EKE ++KRY+ +++SMT++ELD S +++SRI+RIA+GSG + +V
Sbjct: 351 ---INVNEKEQTQQMKRYLYILNSMTSKELDGQVSVVVTLSNSRIIRIAKGSGTTIEQVN 407
Query: 418 EMLEEYKRLAK 428
+L+ YK K
Sbjct: 408 NLLKIYKSFIK 418
>gi|347522718|ref|YP_004780288.1| GTP-binding signal recognition particle SRP54 G- domain containing
protein [Pyrolobus fumarii 1A]
gi|343459600|gb|AEM38036.1| GTP-binding signal recognition particle SRP54 G- domain protein
[Pyrolobus fumarii 1A]
Length = 445
Score = 334 bits (856), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 181/455 (39%), Positives = 288/455 (63%), Gaps = 28/455 (6%)
Query: 9 SISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAG 68
+I A+++ + E+ + E + ++ RALL ADV +LV ++ I++ + G
Sbjct: 6 AIRDAVRKFLRLSGPYERAVEEFIRDLQRALLSADVNVRLVFDLTRRIRERALKEKPPPG 65
Query: 69 HNKRRIIQQAIFNELCKML----DPG-KPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAY 123
++R + ++ EL K+ +P KP +TP VIM VG+QGSGKTTT K A
Sbjct: 66 ASRRDWFLKIVYEELVKLFGGDREPEVKPPYTP-----YVIMLVGVQGSGKTTTAAKLAL 120
Query: 124 YHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKEN 183
++++ G+K LV AD +R GA+DQL+Q A + + FYG D V IA GV+ K+
Sbjct: 121 FYKRMGYKVGLVAADVYRPGAYDQLRQLAERIGVMFYGEPGSRDAVGIATRGVKELKERG 180
Query: 184 CDLIIVDTSGRHK--QEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSV 241
+++IVDT+GRH E AL EEM+++SEA + PD V+ V+D+++GQ +FD A+ F ++
Sbjct: 181 ANIVIVDTAGRHGYGSEVALLEEMKRMSEA-IKPDEVMLVIDAAMGQKSFDLAKRFHEAT 239
Query: 242 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 301
+G++IVTKMDG AKGGGALSAVAAT + + FIGTGE ++EFEVF+ + FVSRLLGMGD
Sbjct: 240 PIGSIIVTKMDGTAKGGGALSAVAATGAIIKFIGTGEDVEEFEVFNPRRFVSRLLGMGDI 299
Query: 302 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPG----F 357
G +++I + ++ + ++++ EG RI+Y Q + + +MGP+ +V MLPG
Sbjct: 300 EGILERIKRLEAAEEFEKTVEEMLEGKLNFRILYRQLRQLTRMGPLRKVLQMLPGVGLAV 359
Query: 358 SSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVM 417
+ E+ G E KI++++ +MDSMT EELD +P++++ SR+ RIARG+G ++ +V
Sbjct: 360 TDEIAKLGEE-----KIRKWLAIMDSMTYEELD--HPEIIDKSRMRRIARGAGVELDDVK 412
Query: 418 EMLEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMN 452
E++ Y+ L ++ ++K +KG + L RN+
Sbjct: 413 ELVNYYRNLQRMLRRLK----KQKGALERLLRNIG 443
>gi|282165325|ref|YP_003357710.1| signal recognition 54 kDa protein [Methanocella paludicola SANAE]
gi|282157639|dbj|BAI62727.1| signal recognition 54 kDa protein [Methanocella paludicola SANAE]
Length = 442
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 189/435 (43%), Positives = 269/435 (61%), Gaps = 11/435 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ AIQ+++NA ID++++++ + +I RAL+QADV KLV ++ IK+
Sbjct: 1 MVLDNLGSSLKSAIQKLANAGKIDKEIIDDVVKDIQRALIQADVNVKLVMKLSNRIKERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ AG + R + + ++ EL ++ GK TP +P IM VGLQGSGKTTT K
Sbjct: 61 LTEAPPAGMDSREHVLRIVYTELVNII--GKA--TPIALEPQTIMMVGLQGSGKTTTTAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A + +KG KPA++CADT+R GA+DQL Q K + FYG D V I G++ +
Sbjct: 117 LARFFSRKGLKPAVICADTYRPGAYDQLSQLCEKLGVMFYGERDNKDAVAIVRNGLKETQ 176
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
K D+ IVDT+GRH E L +EM+ + T N V+D++IGQ A +QA+AF +
Sbjct: 177 K--YDVRIVDTAGRHALETELIKEMKDIWGLT-NFTHRFLVLDAAIGQQASEQAKAFNDA 233
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V + V++TK+DG AKGGGALSAV+ T + + FIG GE D+ E FD F+SRLLGMGD
Sbjct: 234 VGITGVVITKLDGTAKGGGALSAVSDTNTSIAFIGVGETPDDLERFDPDGFISRLLGMGD 293
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
++K +EV + Q+ ++K+ G FTL MY Q + I KMGP+ Q+ SMLP
Sbjct: 294 LKALVEKANEV--LSQKDVNVEKMMTGKFTLNDMYSQLEAINKMGPLKQIMSMLPLGGLG 351
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEML 420
+P + +Q K++ Y +MDSMT +E D +PKL+ SRI RIA GSGR +V E+L
Sbjct: 352 NIPDDAYRMTQDKMQGYRIIMDSMTEDEKD--DPKLIGSSRIARIAMGSGRAPEDVRELL 409
Query: 421 EEYKRLAKIWSKMKG 435
+ +K + K MKG
Sbjct: 410 KYHKMMQKAMKGMKG 424
>gi|383319835|ref|YP_005380676.1| signal recognition particle subunit FFH/SRP54 (srp54) [Methanocella
conradii HZ254]
gi|379321205|gb|AFD00158.1| signal recognition particle subunit FFH/SRP54 (srp54) [Methanocella
conradii HZ254]
Length = 442
Score = 333 bits (853), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 193/454 (42%), Positives = 273/454 (60%), Gaps = 16/454 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ A+Q+++NA +D++V++E + +I RA++QADV KLV + I++
Sbjct: 1 MVLDSLGASLKSALQKLANAGKVDKEVIDEVVKDIQRAMIQADVNVKLVMRLSGRIRERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ G + R + + ++ EL ++ GK TP +P IM VGLQGSGKTTT K
Sbjct: 61 LTEAPPPGMDSREHVLRIVYAELVNII--GKA--TPVALEPQTIMMVGLQGSGKTTTTAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A Y +KG KPA++CADT+R GA+DQL Q K + FYG D V I G+
Sbjct: 117 LARYFARKGLKPAVICADTYRPGAYDQLSQLCAKLGVTFYGERDNKDAVAIVRNGLRETA 176
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
K D+ IVDT+GRH E L +EM+ ++ A N V+D++IGQ A +QA+AF +
Sbjct: 177 K--YDVRIVDTAGRHALETGLIKEMKDIA-ALANFTHRFLVLDAAIGQQASEQAKAFNDA 233
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V + VI+TK+DG AKGGGALSAV+ T + + FIG GE + E FD F+SRLLGMGD
Sbjct: 234 VGITGVIITKLDGTAKGGGALSAVSDTNTSIAFIGVGETPEGLERFDPDGFISRLLGMGD 293
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLP--GFS 358
++K +EV + Q+ ++K+ G FTL MY Q + I KMGP+ Q+ SMLP G
Sbjct: 294 LKALVEKANEV--LSQKDVNVEKMMSGRFTLNDMYAQLEAINKMGPLKQIMSMLPLGGLG 351
Query: 359 SELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVME 418
+ + K +Q K+ Y +MDSMT E + +PKL+ SRIMRIARGSGR +V E
Sbjct: 352 ANITDD-VYKMTQDKLLSYRIIMDSMT--EAEKEDPKLIGSSRIMRIARGSGRSPEDVRE 408
Query: 419 MLEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMN 452
+L+ +K + K MKG P + + L + MN
Sbjct: 409 LLKYHKMMQKAMKGMKGG--PGRANLKKLMKQMN 440
>gi|73668456|ref|YP_304471.1| signal recognition particle protein Srp54 [Methanosarcina barkeri
str. Fusaro]
gi|121731303|sp|Q46E01.1|SRP54_METBF RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|72395618|gb|AAZ69891.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Methanosarcina barkeri str. Fusaro]
Length = 443
Score = 333 bits (853), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 193/446 (43%), Positives = 266/446 (59%), Gaps = 25/446 (5%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MV+ +LG S+ A++++ A IDE+ +NE + +I RALLQADV KLV M IK+
Sbjct: 1 MVMEKLGDSLQGALKKLIGAGRIDERTVNEVVKDIQRALLQADVNVKLVMGMSQRIKERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ AG N R + + ++ EL +++ G + KP +IM VGLQGSGKTT+ K
Sbjct: 61 MKEAPPAGMNPREHVIRIVYQELMEIIGKG----AEIQLKPQIIMMVGLQGSGKTTSTAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A Y Q+KG K +V ADTFR GA+ QLK K + FYG D V I G++
Sbjct: 117 LARYFQRKGLKAGVVAADTFRPGAYHQLKTLCEKLNVAFYGEENNPDAVEITRNGLKAL- 175
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
E D+ IVDT+GRH EA L EEM Q++ A PD V+D+ IGQ A QA AF S
Sbjct: 176 -EKYDVKIVDTAGRHALEADLIEEMEQIN-AVAKPDHKFMVLDAGIGQQASQQAHAFNDS 233
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V + VI+TK+DG AKGGGALSAV+ TK+P+ FIG GE ++FE F+ F+SRLLGMGD
Sbjct: 234 VGITGVIITKLDGTAKGGGALSAVSETKAPIAFIGVGETPEDFEKFEADRFISRLLGMGD 293
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLP----- 355
M+K E + ++ ++ L +G FTL+ MY+Q + + KMGP+ Q+ SMLP
Sbjct: 294 LKSLMEKAEET--LSEEDVNVEALMQGRFTLKDMYKQLEAMNKMGPLKQIMSMLPLGMGG 351
Query: 356 ----GFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGR 411
S E+ + + K+K Y T+MDSMT EE+ ++PKL+ SRI RI+RGSG
Sbjct: 352 MGGVKLSDEMF-----QATSDKMKNYKTIMDSMTEEEM--TDPKLIGGSRIKRISRGSGC 404
Query: 412 QVREVMEMLEEYKRLAKIWSKMKGLK 437
EV E+L+ +K + +G K
Sbjct: 405 SPEEVRELLKYHKTMQTALKGFRGGK 430
>gi|410670619|ref|YP_006922990.1| signal recognition particle protein Srp54 [Methanolobus
psychrophilus R15]
gi|409169747|gb|AFV23622.1| signal recognition particle protein Srp54 [Methanolobus
psychrophilus R15]
Length = 439
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 185/439 (42%), Positives = 277/439 (63%), Gaps = 17/439 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MV+ +LG S+ A++++ + IDE+ + E + +I RALLQADV KLV EM +IK+
Sbjct: 1 MVMDKLGSSLQDALKKLVKSGRIDERTVTEVVKDIQRALLQADVNVKLVMEMSKHIKERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+++ +G + R + + ++ EL ++ GK + P K P IM +GLQGSGKTTT +K
Sbjct: 61 LHEEVPSGMSPREHVLRIVYQELINII--GKSTDIPLK--PQKIMMIGLQGSGKTTTTSK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A Y Q+KG +PA++CADTFR GA+ QLK TK + FYG D V I G++ F
Sbjct: 117 LARYFQRKGLRPAVICADTFRPGAYQQLKTLCTKLDVAFYGEEGNPDAVGIVERGLKEFH 176
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
K D+IIVDT+GRH E L +EM + A PD + V+D +IGQ A +QA+ F +S
Sbjct: 177 K--SDVIIVDTAGRHSLEKDLIKEMEDI-HAMAQPDYKLLVLDGAIGQQASEQARTFNES 233
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
+ + VI++K+DG AKGGGALSAV+ T S + FIG GE ++ E F+ F+SRLLGMGD
Sbjct: 234 IGISGVIISKLDGTAKGGGALSAVSETNSSIAFIGVGETPEDLEKFEPDRFISRLLGMGD 293
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLP--GFS 358
++K E + D++ + +Q + G FTL+ MY+Q +++ K+GP+ Q+ MLP G
Sbjct: 294 IKSLIEKAEETLA-DEELD-VQSMMMGRFTLKDMYKQLESLNKLGPMKQIMQMLPLGGLG 351
Query: 359 SELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVME 418
+++ P+ + + K+KRY +MDSMT EE+ NP+++ SRI RIA GSG +V E
Sbjct: 352 AKI-PEDAYQVTGDKLKRYRILMDSMTEEEM--LNPRVIGSSRIKRIAIGSGSSAEDVRE 408
Query: 419 MLEEYKRLAKIWSKMKGLK 437
+L+ +K + + MKG +
Sbjct: 409 LLKYHKMM---QTAMKGFR 424
>gi|435850492|ref|YP_007312078.1| signal recognition particle GTPase [Methanomethylovorans hollandica
DSM 15978]
gi|433661122|gb|AGB48548.1| signal recognition particle GTPase [Methanomethylovorans hollandica
DSM 15978]
Length = 439
Score = 331 bits (849), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 185/439 (42%), Positives = 276/439 (62%), Gaps = 17/439 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MV+ +LGGS+ A++++ + IDE +NE + +I RA+LQADV KLV M +IK+
Sbjct: 1 MVMEKLGGSLQDALKKLVKSGRIDEHTVNEVVKDIQRAMLQADVNVKLVMTMSNHIKERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+D+ +G N R + + ++ EL ++ GK + P K P IM +GLQGSGKTTT +K
Sbjct: 61 MKEDVPSGMNPREHVIRIVYQELINII--GKGTDIPLK--PQKIMMIGLQGSGKTTTTSK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A Y Q+KG +PA++CADTFR GA+ QLK K + FYG D V I G++ +
Sbjct: 117 LARYFQRKGLRPAVICADTFRPGAYQQLKTLCGKLNVTFYGEEGNPDAVGIVERGLKEVE 176
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
K D+II+DT+GRH E L EEM Q+ A +PD + V+D +IGQ A +QA+AF S
Sbjct: 177 K--YDVIIIDTAGRHSLEKDLIEEMEQI-HAIAHPDYKLLVLDGAIGQQASEQARAFNDS 233
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
+ + V+++K+DG AKGGGA+SAV+ T S + FIG GE ++ E F+ F+S+LLGMGD
Sbjct: 234 IGISGVVISKLDGTAKGGGAISAVSETNSSIAFIGVGETPEDLEKFESDRFISKLLGMGD 293
Query: 301 WSGFMDKIHEVVPMDQQPEL-LQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLP-GFS 358
G ++K E + ++ EL ++ + G FTL+ MY+Q + + KMGP+ Q+ MLP G
Sbjct: 294 IQGLIEKAQENL---KEEELDMEAMMRGRFTLKDMYKQLETLNKMGPMKQIMQMLPLGGM 350
Query: 359 SELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVME 418
+P+ + + K+ +Y +MDSMT EE+ NP+L+ +RI RI+ GSG +V E
Sbjct: 351 GVKVPEEAYQVTGEKLTKYRVVMDSMTEEEM--LNPRLIGSARIKRISMGSGCGPDDVRE 408
Query: 419 MLEEYKRLAKIWSKMKGLK 437
+L+ YK + + MKGL+
Sbjct: 409 LLKYYKTM---QNTMKGLR 424
>gi|269860268|ref|XP_002649856.1| signal recognition particle subunit FFH/SRP54 [Enterocytozoon
bieneusi H348]
gi|220066696|gb|EED44169.1| signal recognition particle subunit FFH/SRP54 [Enterocytozoon
bieneusi H348]
Length = 475
Score = 331 bits (849), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 184/451 (40%), Positives = 284/451 (62%), Gaps = 20/451 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNI-KKI 59
+L LG I +Q + I D V++ + +I LLQ +V K V E++ N+ +KI
Sbjct: 7 FMLKDLGNFIGNRLQNLFCVQITDS-VISNLIKDICTQLLQNNVNPKYVFELRKNLNQKI 65
Query: 60 VNLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCT 119
N NK +IIQQ +F+ L +++DP + KG+ VI+FVGLQGSGKTT+
Sbjct: 66 NNQISNQTNKNKIKIIQQTVFDCLSELIDPQVSPYKISKGEQHVIVFVGLQGSGKTTSIC 125
Query: 120 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGS----YTESDPVRIAVEG 175
KYA +++ KG+K +VCADTFRAGA+DQ+KQNA K + ++G+ TE DPV IA +G
Sbjct: 126 KYARFYRSKGFKVGIVCADTFRAGAYDQIKQNANKINVAYWGNQDEDNTEVDPVSIARKG 185
Query: 176 VETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQ 235
V FK+ + +LI+VDTSGRH Q LF E++ + ++NP+ +IFV+D+ IGQ+A DQ Q
Sbjct: 186 VSHFKRHDYELILVDTSGRHVQSEDLFLEIQNLV-TSINPNNIIFVIDAGIGQSAEDQVQ 244
Query: 236 AFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRL 295
FK+++++G +I+TK+DG K GGALS++A TK PV FIGTGE M++FE F+ K F+S+L
Sbjct: 245 GFKKAINIGGIILTKIDGAEKAGGALSSIAVTKCPVEFIGTGEKMEDFERFNSKIFISKL 304
Query: 296 LGMGDWSGFMDKIHEVVPMDQQP-ELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSML 354
LG+ ++ G +++I V +D P E+ KL++G FTL + I +GPI + +
Sbjct: 305 LGIPNFEGMLEQI---VDLDLNPDEISSKLAQGRFTLGDFRHFYNQICTLGPITNLLKIT 361
Query: 355 PGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQV 413
PG + ++P + K+K+ ++ +SM EL+S + +R++RIARGSG
Sbjct: 362 PGMNKFVIP------DETKLKKIGSIFNSMCKAELNSIGDIFNKEPNRMIRIARGSGTSK 415
Query: 414 REVMEMLEEYKRLAKIWSKMKGLKIPKKGEM 444
+V E+L +K ++ + K+ + +P GEM
Sbjct: 416 EQVSELLHNFKSMSLMAKKI--MNMPGIGEM 444
>gi|218884721|ref|YP_002429103.1| GTP-binding signal recognition particle SRP54, G- domain-containing
protein [Desulfurococcus kamchatkensis 1221n]
gi|218766337|gb|ACL11736.1| GTP-binding signal recognition particle SRP54, G- domain protein
[Desulfurococcus kamchatkensis 1221n]
Length = 449
Score = 331 bits (848), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 178/418 (42%), Positives = 271/418 (64%), Gaps = 6/418 (1%)
Query: 25 EKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELC 84
EK + E + E+ + L++ADV KL E+ IK+ + G ++R ++ EL
Sbjct: 20 EKSVEEFIRELQKELVRADVNLKLAVEITNRIKERALKSEPPPGISRREWFITIVYEELT 79
Query: 85 KMLD-PGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAG 143
++L KPS P K KP VIM VGLQGSGKTTT K AY+++ +G+K LV ADTFR
Sbjct: 80 RLLGGDKKPSIKPLK-KPWVIMLVGLQGSGKTTTAAKLAYFYKLEGYKVGLVAADTFRPA 138
Query: 144 AFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFE 203
A+ QLKQ + +P YG ++ V IAV+GV F + D+II+DT+GRH +E L +
Sbjct: 139 AYTQLKQLGEQIGVPVYGEPDNNNAVSIAVKGVSFFIERRTDIIIIDTAGRHHKEEDLLD 198
Query: 204 EMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSA 263
EMR++SE V PD VI V+D+SIGQ A + A+ F ++ +G++IVTK+DG AKGGGALSA
Sbjct: 199 EMRKISE-QVKPDEVILVIDASIGQQAHNIAKKFHETTPIGSIIVTKLDGTAKGGGALSA 257
Query: 264 VAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQK 323
VAAT + V FIGTGE +DE EVF+ FVSR+LG+GD ++K+ + +D E ++
Sbjct: 258 VAATGAMVKFIGTGEKIDELEVFNPPRFVSRILGLGDIESLVEKVRR-LQLDFTEEDAKR 316
Query: 324 LSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDS 383
L EG +R++Y+Q ++ KMGP+ ++ M+PG +L + K+ + K+ +++ ++S
Sbjct: 317 LIEGKINMRLVYKQLVSLRKMGPLAKIMQMIPGLGVKLPLEVDPKQLEVKLSKWLAAINS 376
Query: 384 MTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLKIPKK 441
MT EEL+ NP +++ SRI RIA G+G ++ +V E+L++Y+ + K+ +++ I KK
Sbjct: 377 MTYEELE--NPDIIDKSRIKRIAYGAGVEIDDVRELLKQYELMKKLSKQLRRRDILKK 432
>gi|429961678|gb|ELA41223.1| hypothetical protein VICG_01712 [Vittaforma corneae ATCC 50505]
Length = 399
Score = 331 bits (848), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 163/365 (44%), Positives = 251/365 (68%), Gaps = 11/365 (3%)
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
+++++ + F L + LDPG + +K K +V++FVGLQG GKTT+ KYA +++KKG
Sbjct: 3 TRQKVVHRIFFETLVRFLDPGSKPYEIQKEKSNVVVFVGLQGCGKTTSICKYANFYKKKG 62
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
++ +VCADTFRAGAFDQ+KQNA+K IP++GS + DPV++A EGV F+K + +LI+V
Sbjct: 63 FRVGIVCADTFRAGAFDQIKQNASKIGIPYFGS-PDPDPVKVAKEGVSKFRKNDFELILV 121
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DTSGRH QE ALF EMR + +A + PD ++FVMD+ IGQ+A +QA FK +V VG +I+T
Sbjct: 122 DTSGRHTQEEALFAEMRDLVDA-ICPDNIVFVMDAGIGQSAEEQAAGFKNAVKVGGIILT 180
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
K+DG +K GGALS+VA T+ P+ F+GTGE MD+ E F+ + FV ++LGMGD G ++++
Sbjct: 181 KIDGASKAGGALSSVATTQCPIEFVGTGEGMDDIEKFNARRFVGKMLGMGDIDGLIERLS 240
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
+ +D++ ++++KL+ G F L + I+ +GPI ++ M+PG + +P
Sbjct: 241 S-IEIDKE-DVIEKLTTGKFRLIDFKNIYTQIVSLGPISKMLEMIPGLGNMAIP------ 292
Query: 370 SQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEMLEEYKRLAK 428
++K KR M M DSMT +EL+S+ + + SRI R+ARGSG V EML +++++
Sbjct: 293 DESKFKRIMHMFDSMTRKELESNGDVFLKEPSRIDRVARGSGTHRDLVSEMLGNFRQMSS 352
Query: 429 IWSKM 433
+ K+
Sbjct: 353 MMKKL 357
>gi|390937784|ref|YP_006401522.1| GTP-binding signal recognition particle SRP54 G- domain-containing
protein [Desulfurococcus fermentans DSM 16532]
gi|390190891|gb|AFL65947.1| GTP-binding signal recognition particle SRP54 G- domain protein
[Desulfurococcus fermentans DSM 16532]
Length = 451
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 178/418 (42%), Positives = 270/418 (64%), Gaps = 6/418 (1%)
Query: 25 EKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELC 84
EK + E + E+ + L++ADV KL E+ IK+ + G ++R ++ EL
Sbjct: 22 EKSVEEFIRELQKELVRADVNLKLAVEITNRIKERALKSEPPPGISRREWFITIVYEELT 81
Query: 85 KMLD-PGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAG 143
++L KPS P K KP VIM VGLQGSGKTTT K AY+++ +G+K LV ADTFR
Sbjct: 82 RLLGGDKKPSIKPLK-KPWVIMLVGLQGSGKTTTAAKLAYFYKLEGYKVGLVAADTFRPA 140
Query: 144 AFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFE 203
A+ QLKQ + + YG +D V IAV+GV F + D+II+DT+GRH +E L +
Sbjct: 141 AYTQLKQLGEQIGVQVYGEPDNNDAVSIAVKGVSFFIERRTDIIIIDTAGRHHKEEDLLD 200
Query: 204 EMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSA 263
EMR++SE V PD VI V+D+SIGQ A + A+ F ++ +G++IVTK+DG AKGGGALSA
Sbjct: 201 EMRKISE-QVKPDEVILVIDASIGQQAHNIAKKFHETTPIGSIIVTKLDGTAKGGGALSA 259
Query: 264 VAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQK 323
VAAT + V FIGTGE +DE EVF+ FVSR+LG+GD ++K+ + +D E ++
Sbjct: 260 VAATGAMVKFIGTGEKIDELEVFNPPRFVSRILGLGDIESLVEKVRR-LQLDFTEEDAKR 318
Query: 324 LSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDS 383
L EG +R++Y+Q ++ KMGP+ ++ M+PG +L + K+ + K+ +++ ++S
Sbjct: 319 LIEGKINMRLVYKQLVSLRKMGPLAKIMQMIPGLGVKLPLEVDPKQLEVKLSKWLAAINS 378
Query: 384 MTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLKIPKK 441
MT EEL+ NP +++ SRI RIA G+G ++ +V E+L++Y+ + K+ +++ I KK
Sbjct: 379 MTYEELE--NPDIIDKSRIKRIAYGAGVEIDDVRELLKQYELMKKLSKQLRRRDILKK 434
>gi|193084148|gb|ACF09814.1| signal recognition particle subunit Ffh SRP54 [uncultured marine
group III euryarchaeote SAT1000-53-B3]
Length = 444
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 177/435 (40%), Positives = 266/435 (61%), Gaps = 10/435 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG ++ +++++ A+ I +++ E + +I RAL+Q+DV +L E+ I+
Sbjct: 1 MVLDALGDALRNTLRKIAGASHISPELIKELVKDIQRALIQSDVNVRLALELSKTIEYRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ AG R + + + EL K + S + K G P IM VGL G GKTTT K
Sbjct: 61 LEEKAPAGMTGREHVVRIVHQELVKAIGE---SRSLKLG-PQKIMLVGLYGQGKTTTTGK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
+ +KKG L+ AD R AFDQL Q + ++P +GS D ++ EG+E FK
Sbjct: 117 LGKHFKKKGLNLGLIAADVHRPAAFDQLSQIGEQVQVPVFGSSDNKDAGKVVKEGLEEFK 176
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
+ D++IVDT+GRH + L EM+ +S+ V PD ++ VMD+++GQ A QAQAF +
Sbjct: 177 E--LDVVIVDTAGRHALDEELISEMKSISK-IVKPDEILLVMDATVGQQAGPQAQAFHDA 233
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V V VI+TK+DG AKGGGALSAVA TK+P++F+GTGE +D E D F+SRLLGMGD
Sbjct: 234 VGVSGVILTKLDGSAKGGGALSAVAVTKAPIVFVGTGESLDSLETLDPDRFISRLLGMGD 293
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
+++ EV+ + + +K+ G FTL M EQ + + KMGP+ +V M+PG S
Sbjct: 294 LQTLLERAEEVLDAESAEDTARKMLSGKFTLIDMREQMEALTKMGPLSKVMEMVPGMSG- 352
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEML 420
+M KG+ E+Q +++++ +M SMT EEL+ NPK++ SRI RIA+GSG +E+ E+L
Sbjct: 353 MMKKGQMDETQDRLEKFKVLMSSMTKEELE--NPKIIKRSRINRIAKGSGSDSQEIRELL 410
Query: 421 EEYKRLAKIWSKMKG 435
+ Y + K+ S + G
Sbjct: 411 KHYNQSRKMMSNLGG 425
>gi|20093371|ref|NP_619446.1| signal recognition particle protein Srp54 [Methanosarcina
acetivorans C2A]
gi|23822174|sp|Q8THD0.1|SRP54_METAC RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|19918737|gb|AAM07926.1| signal recognition particle, 54 kDa protein [Methanosarcina
acetivorans C2A]
Length = 440
Score = 329 bits (843), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 189/443 (42%), Positives = 267/443 (60%), Gaps = 22/443 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MV+ +LG S+ A++++ A IDE+ +NE + +I RALLQADV KLV M IK+
Sbjct: 1 MVMEKLGDSLQGALKKLIGAGRIDERTVNEVVKDIQRALLQADVNVKLVMGMSQRIKERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG N R + + ++ EL +++ G + KP IM VGLQGSGKTT+ K
Sbjct: 61 MKEEPPAGMNPREHVIRIVYQELMEIIGKG----AEIQLKPQTIMMVGLQGSGKTTSAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A Y Q+KG K +V ADTFR GA+ QLK A K + FYG D V I G++ +
Sbjct: 117 LARYFQRKGLKAGVVAADTFRPGAYHQLKTLAEKLNVGFYGEEGNPDAVEITKNGLKALE 176
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
K D+ IVDT+GRH EA L EEM ++ A PD V+D+ IGQ A QA AF S
Sbjct: 177 K--YDIRIVDTAGRHALEADLIEEMERI-HAVAKPDHKFMVLDAGIGQQASQQAHAFNDS 233
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V + VI+TK+DG AKGGGALSAV+ TK+P+ FIG GE ++FE F+ F+SRLLGMGD
Sbjct: 234 VGITGVIITKLDGTAKGGGALSAVSETKAPIAFIGVGETPEDFEKFEADRFISRLLGMGD 293
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLP----- 355
M+K E + ++ ++ L +G FTL+ MY+Q + + KMGP+ Q+ SMLP
Sbjct: 294 LKSLMEKAEE--SLSEEDVNVEALMQGRFTLKDMYKQLEAMNKMGPLKQIMSMLPMGMGG 351
Query: 356 -GFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVR 414
FS E+ + + K+K Y +MDSMT EE+ ++P+++ SRI RI++GSG
Sbjct: 352 MKFSDEMF-----QATSDKMKNYKVIMDSMTEEEM--TDPRVIGGSRIKRISKGSGCSSE 404
Query: 415 EVMEMLEEYKRLAKIWSKMKGLK 437
+V E+L+ +K + +G K
Sbjct: 405 DVRELLKYHKTMQTALKGFRGGK 427
>gi|288931995|ref|YP_003436055.1| GTP-binding signal recognition particle SRP54 G- domain protein
[Ferroglobus placidus DSM 10642]
gi|288894243|gb|ADC65780.1| GTP-binding signal recognition particle SRP54 G- domain protein
[Ferroglobus placidus DSM 10642]
Length = 431
Score = 328 bits (842), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 182/436 (41%), Positives = 277/436 (63%), Gaps = 15/436 (3%)
Query: 9 SISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAG 68
S+ +++++ ++ +D+K++ E + ++ RAL++ADV + V+E+ IKK +++ +G
Sbjct: 4 SLKDVVKKIARSSSVDKKLVEEIVRDVQRALIKADVNVRQVKEISDAIKKRALSEEVLSG 63
Query: 69 HNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKK 128
N R I + ++ E+ + + G KK K IM VGLQGSGKTTT K A Y + K
Sbjct: 64 LNPREHIIKIVYEEILRGVGEG-FDIPLKKSK---IMLVGLQGSGKTTTAAKIAKYFKDK 119
Query: 129 GWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLII 188
G K A++ DT R A++QLKQ A +A + F+G E D V+I EG+E K + D+I+
Sbjct: 120 GMKAAVIAGDTHRPAAYEQLKQLAEQAGLGFFGKKEEKDAVKIVKEGLEALK--DYDVIV 177
Query: 189 VDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIV 248
+DT+GRH E L EEM++++E + PD V+D+SIGQ A QA+AF ++V + A+++
Sbjct: 178 IDTAGRHALEEELIEEMKRIAEVS-KPDYKFLVLDASIGQLASKQAEAFNEAVGIDAIVI 236
Query: 249 TKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKI 308
TK DG AKGGGALSA P+ FIGTGE +++FE FD FVSRLLGMGD ++K+
Sbjct: 237 TKFDGTAKGGGALSAARLIGIPIAFIGTGEKIEDFEKFDPAGFVSRLLGMGDIKALLEKV 296
Query: 309 HEVVPMDQ-QPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLP-GFSSELMPKGR 366
+V ++ PE K G FTL+ +Y+Q + + KMGPI ++F MLP GFS ++ +
Sbjct: 297 ERIVKEEELDPEAFLK---GKFTLKDVYKQLEAMNKMGPISKIFEMLPFGFSLKVDDEAL 353
Query: 367 EKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLEEYKRL 426
E +Q K+K++ +MDSMT EEL NPK+++ SRI RIA GSG ++V E+L Y +
Sbjct: 354 EM-TQEKMKKFKVIMDSMTEEEL--LNPKIIDSSRIRRIAIGSGTTPQDVKELLNYYNTM 410
Query: 427 AKIWSKMKGLKIPKKG 442
+ ++K K+P KG
Sbjct: 411 KNLMKRLKKGKLPIKG 426
>gi|330507723|ref|YP_004384151.1| signal sequence recognition 54 kDa protein [Methanosaeta concilii
GP6]
gi|328928531|gb|AEB68333.1| Signal sequence recognition 54 kDa protein [Methanosaeta concilii
GP6]
Length = 445
Score = 328 bits (841), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 188/437 (43%), Positives = 273/437 (62%), Gaps = 14/437 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LGGS+ A++++++A ID+ +++E + EI RALLQADV KLV ++ IK
Sbjct: 1 MVLDNLGGSLRNALKKIASANKIDKALVDEAVREIQRALLQADVNVKLVMQLSNTIKSRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ A G N R + ++ EL ++ G+ + P K + IM VGLQGSGKTTT K
Sbjct: 61 LDEKPAPGMNPREHVINIVYQELINLV--GRGADIPLKKQN--IMLVGLQGSGKTTTAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A + Q+KG + A++CADTFRAGA+DQLK K I FYG +D +A G+E K
Sbjct: 117 LATFFQRKGLRTAVICADTFRAGAYDQLKALCEKQGIFFYGEKGNTDAPAVARNGLEATK 176
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
K D+ IVDT+GRH E L +EM+ + A VN D + VMD+++GQ A +QA+AF ++
Sbjct: 177 K--YDIRIVDTAGRHALEGDLIQEMKDI-HAVVNADQKLLVMDAALGQQASEQAKAFNEA 233
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V++ VI+TK+DG AKGGGALSAVA TK+ V FIG GE + E F+ F+SR+LGMGD
Sbjct: 234 VNITGVIITKLDGTAKGGGALSAVAETKTSVAFIGVGETPADLERFEADRFISRMLGMGD 293
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLP--GFS 358
+++ EV +Q ++ L G FTL+ MY+Q + + K+GP+ Q+ MLP G
Sbjct: 294 IKTLIERAQEV--QTEQEVDVESLMRGKFTLKDMYQQMEAMNKLGPLKQIMQMLPMGGLG 351
Query: 359 SELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVME 418
EL K + ++ ++ +Y +MDSMT ELD +PK++ SRI RI++GSG V E
Sbjct: 352 FELSDK-EYQMTKDRLDKYRVVMDSMTAAELD--DPKIITASRIKRISQGSGASPDLVRE 408
Query: 419 MLEEYKRLAKIWSKMKG 435
+L+ ++ + K M+G
Sbjct: 409 LLKSHQAMQKALKGMRG 425
>gi|124028501|ref|YP_001013821.1| Signal recognition particle GTPase [Hyperthermus butylicus DSM
5456]
gi|171769654|sp|A2BNB5.1|SRP54_HYPBU RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|123979195|gb|ABM81476.1| Signal recognition particle GTPase [Hyperthermus butylicus DSM
5456]
Length = 447
Score = 328 bits (841), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 179/434 (41%), Positives = 277/434 (63%), Gaps = 17/434 (3%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I RA+ ++ + E ++NE + ++ RAL+ ADV +LV + I++ + G
Sbjct: 7 IRRAVSKLLKRSGPYENIVNEFIRDLQRALISADVNVRLVFNLTKRIRERALKEQPPPGL 66
Query: 70 NKRRIIQQAIFNELCKML----DPG-KPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYY 124
++R + + ++EL K+ +P KP +TP VIM VG+QGSGKTTT K A +
Sbjct: 67 SRREWLVKLTYDELVKLFGGEYEPEVKPPYTP-----YVIMMVGVQGSGKTTTVGKLAKF 121
Query: 125 HQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENC 184
++ G++ +V ADT+R GA++QLKQ A +A FYG DPV IA GVE K+
Sbjct: 122 YRGMGYRVGVVAADTYRPGAYEQLKQLADRAGAMFYGEPGSKDPVGIARRGVEELKQRGA 181
Query: 185 DLIIVDTSGRHK--QEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVS 242
D++IVDT+GRH +E AL +EM++++EA + PD V+ V+D+++GQ ++D A+ F ++
Sbjct: 182 DIVIVDTAGRHGYGEEEALLDEMKRIAEA-IKPDEVVLVIDAAMGQKSYDLAKRFHEATP 240
Query: 243 VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWS 302
VG++IVTKMDG AKGGGALSAVAAT + + FIGTGE +DE EVF K FV+RLLGMGD
Sbjct: 241 VGSIIVTKMDGTAKGGGALSAVAATGARIKFIGTGEDIDEIEVFRPKRFVARLLGMGDLE 300
Query: 303 GFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELM 362
++KI + +++ + + ++ G T R +Y+Q Q + K+GP ++ M+PG S+ L
Sbjct: 301 SLLEKIERLRGVEEFEKTVAEMMSGKITFRTIYKQLQQVTKLGPFRKILQMIPGISTMLE 360
Query: 363 PKGR-EKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEML 420
+ S+ K+K+++T+M+SMT EELD NP L+ + SR+ RIA G+G + EV E+
Sbjct: 361 SLDEAARLSEEKVKKWLTIMNSMTYEELD--NPNLLEERSRVKRIAVGAGVEPSEVRELY 418
Query: 421 EEYKRLAKIWSKMK 434
YK + K+ ++K
Sbjct: 419 NYYKSVKKMMRQLK 432
>gi|378756834|gb|EHY66858.1| signal recognition particle 54 kDa subunit [Nematocida sp. 1 ERTm2]
Length = 477
Score = 328 bits (840), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 178/434 (41%), Positives = 275/434 (63%), Gaps = 11/434 (2%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L+ LG IS A+Q + EK LN+ + +IT +LL ++V ++V ++ I +
Sbjct: 1 MLSDLGAGISNALQGFFGSKE-GEKELNDAIKKITTSLLGSNVNTRVVLNVRKRILERFK 59
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
D+ K + +Q+ +F ELC ++D GK F PKK + S ++FVGLQGSGKTTTC KY
Sbjct: 60 PQDIPTKSAKEKALQKIVFEELCAIMDSGKEPFKPKKKEVSTVLFVGLQGSGKTTTCCKY 119
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKK 181
A Y++++G+K +VCADTFRAGA++Q+KQN I Y +P +A G + K
Sbjct: 120 AKYYKQRGFKVGIVCADTFRAGAYEQVKQNVQGMNIELYIPSDSVNPAHVARAGTDKLKV 179
Query: 182 ENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSV 241
C+L++VDTSGRH QE LF+EM ++ A ++P IFV+D+SIGQ A A++F V
Sbjct: 180 SGCNLVLVDTSGRHTQEGELFDEMEEIV-AAIDPTASIFVVDASIGQTAEIHARSFMSRV 238
Query: 242 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 301
+G+VI+TK DG GGAL +VA TK+PV FIGTGE M+ E F+ K FV RL+G+GD
Sbjct: 239 KLGSVIITKTDGTKNIGGALCSVAETKTPVAFIGTGEGMNHIESFNPKGFVGRLMGLGDI 298
Query: 302 SGFMDKIHEV-VPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
S F +KI + + ++Q EL+ K+ G F++ Y+Q++ IL++GPIGQ+ S++PG +S
Sbjct: 299 SSFAEKIEGLNISQEKQEELIGKIKAGEFSIGDFYDQYKRILELGPIGQLLSLIPGLNSS 358
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEM 419
+ EKE K+ T+ +MT +EL ++ + SR++R+A+GSG +V +
Sbjct: 359 MF---NEKE----FKKMGTIFTAMTKKELKTNGEVFIRSLSRLVRVAKGSGVTPTQVRDA 411
Query: 420 LEEYKRLAKIWSKM 433
+ Y+ +A+++ K+
Sbjct: 412 INTYRMMAQMFQKI 425
>gi|193084084|gb|ACF09754.1| signal recognition particle subunit Ffh SRP54 [uncultured marine
group III euryarchaeote AD1000-40-D7]
Length = 444
Score = 327 bits (839), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 178/439 (40%), Positives = 268/439 (61%), Gaps = 18/439 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG ++ +++++ A+ I +++ E + +I RALLQ+DV +L E+ I+
Sbjct: 1 MVLDALGDALRNTLRKIAGASHISPELIKELVRDIQRALLQSDVNVRLALELSKTIENRA 60
Query: 61 NLDDLAAGHNKR----RIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTT 116
+ AG R RI+ Q + N L + S + K G P IM VGL G GKTT
Sbjct: 61 LEEKAPAGMTGREHVVRIVHQELVNALGE-------SRSLKLG-PQKIMLVGLYGQGKTT 112
Query: 117 TCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGV 176
T K + +KKG L+ AD R AFDQL Q + ++P +GS D ++ EG+
Sbjct: 113 TTGKLGKHFKKKGLNLGLIAADVHRPAAFDQLSQIGEQIQVPVFGSSDNKDAAKVVKEGL 172
Query: 177 ETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQA 236
+ F + D++IVDT+GRH + L EM+ +S+ V PD ++ VMD+++GQ A QAQA
Sbjct: 173 KEFTE--LDVVIVDTAGRHALDEELISEMKSISK-IVQPDEILLVMDATVGQQAGPQAQA 229
Query: 237 FKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLL 296
F +V V VI+TK+DG AKGGGALSAVA TK+P++F+GTGE +D E D F+SRLL
Sbjct: 230 FHDAVGVSGVILTKLDGSAKGGGALSAVAVTKAPIVFVGTGESLDSLETLDPDRFISRLL 289
Query: 297 GMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPG 356
GMGD +++ EV+ + + +K+ G FTL M EQ + + KMGP+ +V M+PG
Sbjct: 290 GMGDLQTLLERAEEVLDAESAEDTARKMLSGKFTLIDMREQMEALTKMGPLSKVMEMVPG 349
Query: 357 FSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREV 416
S +M KG+ E+Q K++++ +M+SMT EEL+ NPK++ SRI RIA+GSG +E+
Sbjct: 350 MSG-MMKKGQMDETQDKLEKFKVLMNSMTEEELE--NPKIIKRSRINRIAKGSGSDPQEI 406
Query: 417 MEMLEEYKRLAKIWSKMKG 435
++L++Y + K+ S + G
Sbjct: 407 RDLLKQYNQSRKMMSNIGG 425
>gi|2231060|emb|CAA73234.1| fifty-four homologue of SRP54 [Sulfolobus acidocaldarius]
Length = 446
Score = 327 bits (838), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 179/421 (42%), Positives = 270/421 (64%), Gaps = 13/421 (3%)
Query: 25 EKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELC 84
EK +NE + E+ L++ADV +LV+++ IKK + + + KR +++EL
Sbjct: 21 EKAVNEFIKELQIILIKADVNVRLVKDLTDRIKKRITEEKPPSAIEKREWFISIVYDELS 80
Query: 85 KMLDPGK-PSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAG 143
++ K P PKK P +IM VG+QGSGKTTT K A +++KKG+K LV AD +R
Sbjct: 81 RLFGGDKEPEVMPKK-LPYIIMLVGVQGSGKTTTSGKLALFYKKKGYKVGLVAADIYRPA 139
Query: 144 AFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHK--QEAAL 201
A++QL Q + IP YG +P+ IA G+E F KE +++I+DT+GRH +EA+L
Sbjct: 140 AYEQLIQIGQQINIPVYGEPGNKNPIEIATNGLEKFLKEKMNIVIIDTAGRHGYGEEASL 199
Query: 202 FEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGAL 261
EEM+ + + ++PD VI V+D+SIGQ A+D A F Q+ +G++IV+KMDG AKGGGAL
Sbjct: 200 LEEMKSMYD-KIHPDEVILVIDASIGQKAYDLASRFHQASPIGSLIVSKMDGTAKGGGAL 258
Query: 262 SAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELL 321
SAV AT + + FIGTGE +DE EVF+ + FVSRLLG+GD ++KI V + + +
Sbjct: 259 SAVIATGAQIKFIGTGEKLDELEVFNPRRFVSRLLGLGDIESIIEKIKSVEDYENLEKRM 318
Query: 322 QKLSEGN--FTLRIMYEQFQNILKMGPIGQVFSMLPGFSS-ELMPKGREKESQAKIKRYM 378
+ + G TLR +Y+Q + KMGP+G++F MLPG +P+ + K + KI+ +M
Sbjct: 319 EDVISGKTKLTLRDIYKQLIALRKMGPLGKIFQMLPGAGILSQVPEEQLKLGEEKIRTFM 378
Query: 379 TMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLEEYK---RLAKIWSKMKG 435
+M+SMT +ELD NP +++ +R+ RIA+G+G V EV E+L++Y+ L K+ + KG
Sbjct: 379 AIMNSMTYKELD--NPSIIDKARMRRIAKGAGVTVEEVKELLKQYQMTNNLLKMVKRRKG 436
Query: 436 L 436
L
Sbjct: 437 L 437
>gi|15679321|ref|NP_276438.1| signal recognition particle protein Srp54 [Methanothermobacter
thermautotrophicus str. Delta H]
gi|3334341|sp|O27376.1|SRP54_METTH RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|2622427|gb|AAB85799.1| signal recognition particle protein SRP54 [Methanothermobacter
thermautotrophicus str. Delta H]
Length = 442
Score = 327 bits (838), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 189/441 (42%), Positives = 275/441 (62%), Gaps = 11/441 (2%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L LG S+S+ +++++ TI+DE+V+ E + +I RAL+Q+DV KLV + +I++
Sbjct: 1 MLGNLGRSLSKTMKKLAGMTIVDEEVVREVIKDIQRALIQSDVNIKLVFNLSKSIEERAL 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
++ G + I +++E+ K+L KP I+F+GLQGSGKTTT K
Sbjct: 61 NEEPPKGITPKEHIISIVYDEMVKLLGEKSHELVIDD-KPYRILFLGLQGSGKTTTIGKL 119
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKK 181
A Y +KKG+ +VC DT+R A +QLKQ + YG D + +A +G+ F+K
Sbjct: 120 ARYLRKKGFTVGVVCTDTWRPAALEQLKQYTEGQDVSIYGDPQNRDALDLAEKGLARFQK 179
Query: 182 ENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSV 241
+ D+II DT+GRHK+E L EM ++S A V P I V+D +IGQ A +QA AF+++
Sbjct: 180 K--DVIIFDTAGRHKEEKDLLREMEELS-AIVEPHEAILVIDGTIGQQAREQALAFRKAT 236
Query: 242 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 301
+G++IVTK+DG AKGGGALSAVA +P+ FIGTGE +D+ EVFD + F+SRLLGMGD
Sbjct: 237 DIGSIIVTKLDGSAKGGGALSAVAEIGAPIKFIGTGERIDDLEVFDPERFISRLLGMGDL 296
Query: 302 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 361
++K+ EV + E L + G FTLR M QF+ + KMGP+ QV SMLPG
Sbjct: 297 RSLLEKVEEVSEEEIAEESLDAILSGKFTLRDMRVQFEMMGKMGPLQQVMSMLPGAGK-- 354
Query: 362 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLE 421
+PK + ++ I++Y+ +MDSMT EEL+ P ++ SRI RIARGSG + +V E+L+
Sbjct: 355 LPKDASRMTEETIRKYLIIMDSMTEEELE--KPDIIKHSRIRRIARGSGTRNEDVKELLK 412
Query: 422 EYKRLAKIWSKMKGLKIPKKG 442
Y+ K MKGL K G
Sbjct: 413 YYRVTKK---AMKGLGRRKMG 430
>gi|224154027|ref|XP_002337428.1| predicted protein [Populus trichocarpa]
gi|222839177|gb|EEE77528.1| predicted protein [Populus trichocarpa]
Length = 162
Score = 327 bits (838), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 153/161 (95%), Positives = 158/161 (98%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLAQLGGSISRAIQQMSNATIIDEK LN+CLNEITRALLQ+DVQFKLVR+MQTNIKKIV
Sbjct: 1 MVLAQLGGSISRAIQQMSNATIIDEKALNDCLNEITRALLQSDVQFKLVRDMQTNIKKIV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
NLDDLAAGHNKRRIIQQAIFNELCK+LDPGK SFTPKKGK SV+MFVGLQGSGKTTTCTK
Sbjct: 61 NLDDLAAGHNKRRIIQQAIFNELCKILDPGKSSFTPKKGKTSVVMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYG 161
YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYG
Sbjct: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYG 161
>gi|119872111|ref|YP_930118.1| GTP-binding signal recognition particle [Pyrobaculum islandicum DSM
4184]
gi|158512993|sp|A1RS43.1|SRP54_PYRIL RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|119673519|gb|ABL87775.1| signal recognition particle subunit FFH/SRP54 (srp54) [Pyrobaculum
islandicum DSM 4184]
Length = 433
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 181/439 (41%), Positives = 274/439 (62%), Gaps = 13/439 (2%)
Query: 6 LGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDL 65
LG S+ ++++ + IDE L E EI RALL+ADV +V+ N K + +
Sbjct: 4 LGEVFSKLVEKIRGVSYIDEATLQELSREIQRALLKADVPLDMVKTFTENAVKRMREEKP 63
Query: 66 AAGHNKRRIIQQAIFNELCKMLDPGKPS-FTPKKGKPSVIMFVGLQGSGKTTTCTKYAYY 124
AG R + +++EL K+L +P+ F P K KP +++ +G++GSGKTTT K A Y
Sbjct: 64 PAGIPPREYVLYILYDELVKLLGGEQPAEFKPVK-KPYLVLLLGVEGSGKTTTAAKLARY 122
Query: 125 HQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENC 184
K+G++ LV DT R AFDQLKQ A K +PFYG D V IA GV+ FK N
Sbjct: 123 LVKRGYRVGLVETDTIRPAAFDQLKQLAEKIGVPFYGERDSKDAVEIARRGVQNFK--NM 180
Query: 185 DLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVG 244
D++I+DT+GRHK E AL +E++ + EA VNPD VI V+D+++G+ A QA+AF + + +
Sbjct: 181 DVVIIDTAGRHKNEEALLQEVKMIYEA-VNPDEVILVIDATVGKLAAAQAEAFMKYLPIH 239
Query: 245 AVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGF 304
+VI+TKMD A+GGGAL+AV T + V FIG GE +DEF++F+ + FV+R+LGMGD
Sbjct: 240 SVIITKMDSTARGGGALAAVIKTGARVKFIGVGEDVDEFDLFNPRKFVARVLGMGDLDAL 299
Query: 305 MDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPK 364
++KI V ++ ++LQ++ G L +Q + +LK+GP+ +V +LPG + + +
Sbjct: 300 VEKIKAVF---EEEKVLQEIESGRLDLLTFKKQIEGLLKLGPLSKVLQLLPGGFAAKISE 356
Query: 365 GREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLEEYK 424
+ + SQ +K++ ++ SMT EEL NP ++N SRI RIA G+G ++V EML Y+
Sbjct: 357 EQVELSQKNLKKWYAILSSMTIEEL--KNPDILNASRIRRIALGAGVTPKDVKEMLTVYE 414
Query: 425 RLAKIWSKMK---GLKIPK 440
L K+ +K ++IPK
Sbjct: 415 NLKKMSKTLKRQLRMRIPK 433
>gi|70607071|ref|YP_255941.1| signal recognition 54 kDa protein [Sulfolobus acidocaldarius DSM
639]
gi|449067310|ref|YP_007434392.1| signal recognition particle protein Srp54 [Sulfolobus
acidocaldarius N8]
gi|449069580|ref|YP_007436661.1| signal recognition particle protein Srp54 [Sulfolobus
acidocaldarius Ron12/I]
gi|73920792|sp|O07853.2|SRP54_SULAC RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|68567719|gb|AAY80648.1| signal recognition 54 kDa protein [Sulfolobus acidocaldarius DSM
639]
gi|449035818|gb|AGE71244.1| signal recognition particle protein Srp54 [Sulfolobus
acidocaldarius N8]
gi|449038088|gb|AGE73513.1| signal recognition particle protein Srp54 [Sulfolobus
acidocaldarius Ron12/I]
Length = 444
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 179/421 (42%), Positives = 270/421 (64%), Gaps = 13/421 (3%)
Query: 25 EKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELC 84
EK +NE + E+ L++ADV +LV+++ IKK + + + KR +++EL
Sbjct: 19 EKAVNEFIKELQIILIKADVNVRLVKDLTDRIKKRITEEKPPSAIEKREWFISIVYDELS 78
Query: 85 KMLDPGK-PSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAG 143
++ K P PKK P +IM VG+QGSGKTTT K A +++KKG+K LV AD +R
Sbjct: 79 RLFGGDKEPEVMPKK-LPYIIMLVGVQGSGKTTTSGKLALFYKKKGYKVGLVAADIYRPA 137
Query: 144 AFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHK--QEAAL 201
A++QL Q + IP YG +P+ IA G+E F KE +++I+DT+GRH +EA+L
Sbjct: 138 AYEQLIQIGQQINIPVYGEPGNKNPIEIATNGLEKFLKEKMNIVIIDTAGRHGYGEEASL 197
Query: 202 FEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGAL 261
EEM+ + + ++PD VI V+D+SIGQ A+D A F Q+ +G++IV+KMDG AKGGGAL
Sbjct: 198 LEEMKSMYD-KIHPDEVILVIDASIGQKAYDLASRFHQASPIGSLIVSKMDGTAKGGGAL 256
Query: 262 SAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELL 321
SAV AT + + FIGTGE +DE EVF+ + FVSRLLG+GD ++KI V + + +
Sbjct: 257 SAVIATGAQIKFIGTGEKLDELEVFNPRRFVSRLLGLGDIESIIEKIKSVEDYENLEKRM 316
Query: 322 QKLSEGN--FTLRIMYEQFQNILKMGPIGQVFSMLPGFSS-ELMPKGREKESQAKIKRYM 378
+ + G TLR +Y+Q + KMGP+G++F MLPG +P+ + K + KI+ +M
Sbjct: 317 EDVISGKTKLTLRDIYKQLIALRKMGPLGKIFQMLPGAGILSQVPEEQLKLGEEKIRTFM 376
Query: 379 TMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLEEYK---RLAKIWSKMKG 435
+M+SMT +ELD NP +++ +R+ RIA+G+G V EV E+L++Y+ L K+ + KG
Sbjct: 377 AIMNSMTYKELD--NPSIIDKARMRRIAKGAGVTVEEVKELLKQYQMTNNLLKMVKRRKG 434
Query: 436 L 436
L
Sbjct: 435 L 435
>gi|172048109|sp|A5UMY7.2|SRP54_METS3 RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
Length = 445
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 187/456 (41%), Positives = 276/456 (60%), Gaps = 13/456 (2%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L LG ++++ ++++ ++ID+K + E + EI RAL+Q+DV LV ++ IKK
Sbjct: 1 MLGNLGENLTKTMKKLVGISVIDKKTIEEVVKEIQRALIQSDVNIALVLDLSKKIKKRAL 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
++ G R + I+ E+ +L P KP I+F+GLQGSGKTTT K
Sbjct: 61 EEEPPKGITPREHVITIIYEEMVNLLGGEAPGLDIDV-KPYKILFLGLQGSGKTTTIGKL 119
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKK 181
Y QKKG+ PA+VC DT+R A++QL+Q + ++P YG D + +A +G++ FK
Sbjct: 120 CRYLQKKGFNPAVVCTDTWRPAAYEQLRQLTEEMQVPLYGDPDNKDALDLAQKGLKEFK- 178
Query: 182 ENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSV 241
N +II DT+GRHKQE L EM + + + P I V+D +IGQ A +QA+AF Q+
Sbjct: 179 -NRKVIIFDTAGRHKQEEDLIAEMDTLDD-IIQPTESILVIDGTIGQQAGEQAKAFSQAT 236
Query: 242 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 301
VG++I+TK+DG AKGGGA+SAVA T +P+ FIGTGE +D+FE+FD F+SRLLGMGD
Sbjct: 237 DVGSIIITKLDGSAKGGGAMSAVAETGAPIKFIGTGERIDDFELFDPARFISRLLGMGDI 296
Query: 302 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 361
++K + + D + ++ + G FTL M QF+ + MGP+ QV SM+PG +++
Sbjct: 297 QTLIEKAEDSIDEDMAEKTMKNMMSGKFTLVDMKNQFEMMNSMGPMQQVLSMIPGLGNKV 356
Query: 362 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLE 421
K K ++ KI Y +M SMT +E++ NPKL+ SRI RIA G+G + EV ++L+
Sbjct: 357 -SKEASKMTEDKIDGYKVIMSSMTKKEME--NPKLIKQSRIRRIAMGAGVEESEVRDLLK 413
Query: 422 EYKRLAKIWSKMKGLKIPKKGEMSALSRN-MNAQHM 456
Y K MKG I K+G S N M Q M
Sbjct: 414 YYNNTKKT---MKG--IGKRGRFGNNSMNRMMGQFM 444
>gi|296109473|ref|YP_003616422.1| GTP-binding signal recognition particle SRP54 G- domain protein
[methanocaldococcus infernus ME]
gi|295434287|gb|ADG13458.1| GTP-binding signal recognition particle SRP54 G- domain protein
[Methanocaldococcus infernus ME]
Length = 448
Score = 326 bits (836), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 190/434 (43%), Positives = 281/434 (64%), Gaps = 10/434 (2%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L +L ++++AI ++ NA +D+K++ E + +I RAL+QADV KLV ++ I++
Sbjct: 1 MLEKLSENLNKAINKIKNAMFVDKKLIKEVVKDIQRALIQADVNVKLVLKITKEIERRAL 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
++ G +K+ I + ++ EL K+L + G+ +VIM VG+QGSGKTTT K
Sbjct: 61 EEEPPKGFSKKEHIIKIVYEELVKLLGEEAKPLKIEPGRRNVIMLVGIQGSGKTTTAAKL 120
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKK 181
A Y +KKG++ L+ ADT+R A++QLKQ A K +P YG ++ P I EG+ FK
Sbjct: 121 AKYLKKKGYRVGLIAADTYRPAAYEQLKQLAEKIDVPIYGDLSKK-PEDIVKEGLNKFK- 178
Query: 182 ENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSV 241
N D++I+DT+GRHK+E L EEM+++ E + NPD ++ V+D +IGQ A QA+AFK +V
Sbjct: 179 -NVDVVIIDTAGRHKEEKGLLEEMKRIKEIS-NPDEIMLVIDGTIGQQARVQAKAFKDAV 236
Query: 242 -SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
+G++IVTK+DG AKGGGALSAVA TK+P+ FIGTGE +D+FE FD K F+SRLLG+GD
Sbjct: 237 GEIGSIIVTKLDGSAKGGGALSAVAETKAPIKFIGTGEKIDDFEEFDPKKFISRLLGLGD 296
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
+ K E++ ++ E ++ + G FTL + Q + I MG + ++ SM+PG S
Sbjct: 297 LDTLLKKADEIID-EKAEESVEAIMRGKFTLNELKAQLEAIENMGSMKKILSMIPGLSG- 354
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEML 420
MPK ++AKIKRY ++DSMT EE NPK++ SRI RIARGSG EV E+L
Sbjct: 355 -MPKELSHLTEAKIKRYKVIIDSMTMEE--RENPKIIKASRIRRIARGSGSSESEVKEVL 411
Query: 421 EEYKRLAKIWSKMK 434
Y+ K++
Sbjct: 412 RYYETTKNAIEKLR 425
>gi|148643420|ref|YP_001273933.1| signal recognition particle protein Srp54 [Methanobrevibacter
smithii ATCC 35061]
gi|222445662|ref|ZP_03608177.1| hypothetical protein METSMIALI_01303 [Methanobrevibacter smithii
DSM 2375]
gi|288869608|ref|ZP_05975207.2| signal recognition particle protein [Methanobrevibacter smithii DSM
2374]
gi|148552437|gb|ABQ87565.1| signal recognition particle GTPase SRP54 [Methanobrevibacter
smithii ATCC 35061]
gi|222435227|gb|EEE42392.1| Signal peptide binding domain protein [Methanobrevibacter smithii
DSM 2375]
gi|288860574|gb|EFC92872.1| signal recognition particle protein [Methanobrevibacter smithii DSM
2374]
Length = 447
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 187/456 (41%), Positives = 276/456 (60%), Gaps = 13/456 (2%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L LG ++++ ++++ ++ID+K + E + EI RAL+Q+DV LV ++ IKK
Sbjct: 3 MLGNLGENLTKTMKKLVGISVIDKKTIEEVVKEIQRALIQSDVNIALVLDLSKKIKKRAL 62
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
++ G R + I+ E+ +L P KP I+F+GLQGSGKTTT K
Sbjct: 63 EEEPPKGITPREHVITIIYEEMVNLLGGEAPGLDIDV-KPYKILFLGLQGSGKTTTIGKL 121
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKK 181
Y QKKG+ PA+VC DT+R A++QL+Q + ++P YG D + +A +G++ FK
Sbjct: 122 CRYLQKKGFNPAVVCTDTWRPAAYEQLRQLTEEMQVPLYGDPDNKDALDLAQKGLKEFK- 180
Query: 182 ENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSV 241
N +II DT+GRHKQE L EM + + + P I V+D +IGQ A +QA+AF Q+
Sbjct: 181 -NRKVIIFDTAGRHKQEEDLIAEMDTLDD-IIQPTESILVIDGTIGQQAGEQAKAFSQAT 238
Query: 242 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 301
VG++I+TK+DG AKGGGA+SAVA T +P+ FIGTGE +D+FE+FD F+SRLLGMGD
Sbjct: 239 DVGSIIITKLDGSAKGGGAMSAVAETGAPIKFIGTGERIDDFELFDPARFISRLLGMGDI 298
Query: 302 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 361
++K + + D + ++ + G FTL M QF+ + MGP+ QV SM+PG +++
Sbjct: 299 QTLIEKAEDSIDEDMAEKTMKNMMSGKFTLVDMKNQFEMMNSMGPMQQVLSMIPGLGNKV 358
Query: 362 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLE 421
K K ++ KI Y +M SMT +E++ NPKL+ SRI RIA G+G + EV ++L+
Sbjct: 359 -SKEASKMTEDKIDGYKVIMSSMTKKEME--NPKLIKQSRIRRIAMGAGVEESEVRDLLK 415
Query: 422 EYKRLAKIWSKMKGLKIPKKGEMSALSRN-MNAQHM 456
Y K MKG I K+G S N M Q M
Sbjct: 416 YYNNTKKT---MKG--IGKRGRFGNNSMNRMMGQFM 446
>gi|288559422|ref|YP_003422908.1| signal recognition particle SRP54 protein [Methanobrevibacter
ruminantium M1]
gi|288542132|gb|ADC46016.1| signal recognition particle SRP54 protein [Methanobrevibacter
ruminantium M1]
Length = 444
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 174/427 (40%), Positives = 268/427 (62%), Gaps = 7/427 (1%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L LG +++ +++++ ++ID+KV+ E + +I RAL+Q+DV +LV ++ I+K
Sbjct: 1 MLGSLGENLTNTMKKLAGMSVIDKKVIKEVVKDIQRALIQSDVNIQLVLKLSKTIEKRAL 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
++ G R + I+ E+ +L + KP I+F+GLQGSGKTTT K
Sbjct: 61 EEEPPKGITPREHVITIIYEEMVNLLGSEAQELKITE-KPFKILFLGLQGSGKTTTIGKL 119
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKK 181
Y Q+KG+ PA+VC DT+R A++QLKQ + +I YG D + +A +G++ FK
Sbjct: 120 CRYLQRKGFSPAVVCTDTWRPAAYEQLKQLTEEMQIQLYGDPDNKDALDLAEKGLKHFK- 178
Query: 182 ENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSV 241
N +II DT+GRHK E L EEM ++ + +NP + V+D++IGQ A +QA+AF Q+
Sbjct: 179 -NQKIIIFDTAGRHKNEEDLIEEMNKL-DKIINPSESMLVIDATIGQQAGEQAKAFSQAT 236
Query: 242 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 301
+G++I++K+DG AKGGGALSAVA T +P+ FIGTGE +D+FE FD + F+SRLLGMGD
Sbjct: 237 DIGSIIISKLDGTAKGGGALSAVAETGAPIKFIGTGEGIDDFEAFDPERFISRLLGMGDI 296
Query: 302 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 361
++K EV+ D+ + + + G FTL M QF+ + MGP+ QV +M+PG ++
Sbjct: 297 RSLIEKAEEVIDEDEATKTMNNMLSGKFTLVDMRSQFEMMNSMGPMQQVMNMIPGLGGKI 356
Query: 362 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLE 421
PK + ++ KI + +M SMT EE+ NPK++ SRI RIARG+G + +V E+L
Sbjct: 357 -PKEASQMTEDKINGFKIIMSSMTEEEM--LNPKIIKQSRIQRIARGAGVEESDVKELLR 413
Query: 422 EYKRLAK 428
Y K
Sbjct: 414 YYNNTKK 420
>gi|147919502|ref|YP_686758.1| signal recognition particle protein Srp54 [Methanocella arvoryzae
MRE50]
gi|121687852|sp|Q0W2G1.1|SRP54_UNCMA RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|110622154|emb|CAJ37432.1| signal recognition particle [Methanocella arvoryzae MRE50]
Length = 444
Score = 325 bits (832), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 184/430 (42%), Positives = 266/430 (61%), Gaps = 14/430 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ A+++++N+ ID++V++E + +I RA++QADV KLV ++ + IK
Sbjct: 1 MVLDNLGTSLKDALRKIANSGKIDKEVIDEVVKDIQRAMIQADVNVKLVMKLSSTIKNRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ AG N + + + ++ EL ++ GK TP + IM VGLQGSGKTTT K
Sbjct: 61 LTEAPPAGMNSKEHVLRIVYTELVNIV--GKA--TPVALQSQTIMMVGLQGSGKTTTSAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A Y +KG KPA++CADT+R GA+DQLKQ K + FYG D V I G++
Sbjct: 117 IARYFARKGLKPAVICADTYRPGAYDQLKQLCDKLGVGFYGEAGNKDAVAIVRNGLKEMA 176
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
K D+ IVDT+GRH E L +EM+ + T D + V+D++IGQ A +QA+AF +
Sbjct: 177 K--YDVKIVDTAGRHALETDLIQEMKDIYGLT-KFDHKLLVLDAAIGQQASEQARAFNDA 233
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
+ + V++TK+DG AKGGGALSAV+ T + + FIG GE D+ E FD F+SRLLGMGD
Sbjct: 234 IGITGVVITKLDGTAKGGGALSAVSDTNTSIAFIGVGETPDDMERFDPDGFISRLLGMGD 293
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLP--GFS 358
+++ +EV+ D ++K+ +G FTL MY+Q + I KMGP+ Q+ SMLP G
Sbjct: 294 LRALVERANEVLQKDDVN--VEKMMQGKFTLNDMYDQLEAINKMGPLKQIMSMLPLGGLG 351
Query: 359 SELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVME 418
+ K +Q K+K Y +MDSMT E D +PKL+ SRI R+A GSG+ EV E
Sbjct: 352 GNITDD-MYKMTQDKLKGYKVIMDSMTAAERD--DPKLIGSSRIARVAHGSGKSPEEVRE 408
Query: 419 MLEEYKRLAK 428
+L+ +K + K
Sbjct: 409 LLKYHKMMQK 418
>gi|60623872|ref|NP_377232.2| signal recognition particle protein [Sulfolobus tokodaii str. 7]
gi|28380160|sp|Q971S9.2|SRP54_SULTO RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|342306424|dbj|BAK54513.1| signal recognition particle 54 kDa protein [Sulfolobus tokodaii
str. 7]
Length = 445
Score = 325 bits (832), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 182/421 (43%), Positives = 264/421 (62%), Gaps = 13/421 (3%)
Query: 25 EKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELC 84
+K +N+ + E+ +L+++DV KLV + IK + + +R +++EL
Sbjct: 19 DKAVNDFIKELQISLIKSDVNVKLVSNLTQKIKDRLEKEKPPTAIERREWFISIVYDELS 78
Query: 85 KMLDPG-KPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAG 143
K+ P PKK P VIM VG+QGSGKTTT K A +++KKG+K LV AD +R
Sbjct: 79 KLFGGDINPEVMPKK-IPYVIMLVGVQGSGKTTTAGKLALFYKKKGYKVGLVAADVYRPA 137
Query: 144 AFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHK--QEAAL 201
A+DQL Q + +P YG +D V IA GVE F E D+IIVDT+GRH +E L
Sbjct: 138 AYDQLVQIGKQINVPVYGEPNNTDAVGIAKRGVEKFLSEKYDIIIVDTAGRHGYGEEVKL 197
Query: 202 FEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGAL 261
EEM+ + + + PD VI V+D+SIGQ A+D A F Q+ +G++IVTKMDG AKGGGAL
Sbjct: 198 LEEMKNMY-SEIKPDEVILVIDASIGQKAYDLASRFHQASPIGSIIVTKMDGTAKGGGAL 256
Query: 262 SAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELL 321
SAVAAT + + FIGTGE +DE EVF+ + FVSR+LGMGD ++KI + +Q + +
Sbjct: 257 SAVAATGAAIKFIGTGEKLDELEVFNPRRFVSRILGMGDIESIIEKIKGMEEYEQIQKKM 316
Query: 322 QKLSEG--NFTLRIMYEQFQNILKMGPIGQVFSMLPGFSS-ELMPKGREKESQAKIKRYM 378
+++ G TLR +Y+Q + KMGP+ ++ MLPGF +P+ + K + KIK+++
Sbjct: 317 EEVMSGKAKLTLRDIYKQLTALRKMGPLNKILQMLPGFGVFSQIPEEQLKLGEEKIKKFL 376
Query: 379 TMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLEEYK---RLAKIWSKMKG 435
+M+SMT +ELD NP +++ SRI RIA+GSG EV E+L++Y+ L K+ + KG
Sbjct: 377 VIMNSMTYKELD--NPSIIDKSRIRRIAKGSGTSPEEVKELLKQYQVTNNLLKMVKRRKG 434
Query: 436 L 436
L
Sbjct: 435 L 435
>gi|387594285|gb|EIJ89309.1| signal recognition particle 54 kDa subunit [Nematocida parisii
ERTm3]
gi|387595031|gb|EIJ92658.1| signal recognition particle 54 kDa subunit [Nematocida parisii
ERTm1]
Length = 477
Score = 324 bits (831), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 176/434 (40%), Positives = 274/434 (63%), Gaps = 11/434 (2%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L+ LG IS A+ + EK LN+ + +IT +LL ++V ++V ++ I +
Sbjct: 1 MLSDLGAGISNALHGFFGSKE-GEKELNDAIKKITTSLLGSNVNTRVVLNVRKRILERFK 59
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
++ K + +Q+ +F ELC ++D GK F PKK + S ++FVGLQGSGKTTTC KY
Sbjct: 60 PHEIPTKSAKEKALQRIVFEELCAIMDSGKEPFKPKKKEVSTVLFVGLQGSGKTTTCCKY 119
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKK 181
A Y++++G+K +VCADTFRAGA++Q+KQN I + S + DP +A G K+
Sbjct: 120 AKYYKQRGFKVGIVCADTFRAGAYEQVKQNVQGMNIEVFISDSSVDPAVVAKTGASALKE 179
Query: 182 ENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSV 241
C+L++VDTSGRH QE LF+EM ++ EA +NP IFV+D+SIGQ A A++F V
Sbjct: 180 SGCNLVLVDTSGRHTQEGELFKEMEEIVEA-INPTATIFVVDASIGQTAETHARSFMSRV 238
Query: 242 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 301
+G+VI+TK DG GGAL +VA TK+PV FIGTGE M + E F+ K FV RL+G+GD
Sbjct: 239 KLGSVIITKTDGTKNIGGALCSVAETKTPVAFIGTGEGMTQIESFNPKGFVGRLMGLGDI 298
Query: 302 SGFMDKIHEV-VPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
S F +KI + + ++Q EL+ K+ G F++ Y+Q++ IL++GPIGQ+ S++PG +S
Sbjct: 299 SSFAEKIEGLNISPEKQEELIGKIKAGEFSIGDFYDQYKKILELGPIGQLLSLIPGMNSS 358
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMND-SRIMRIARGSGRQVREVMEM 419
+ EKE K+ + +MT +EL ++ + R++R+A+G G +V +
Sbjct: 359 MF---NEKE----FKKMGVIFTAMTKKELKTNGEVFIRSLPRLIRVAKGCGATPTQVRDA 411
Query: 420 LEEYKRLAKIWSKM 433
+ Y+ +A+++ K+
Sbjct: 412 INTYRMMAQMFQKI 425
>gi|294495522|ref|YP_003542015.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Methanohalophilus mahii DSM 5219]
gi|292666521|gb|ADE36370.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Methanohalophilus mahii DSM 5219]
Length = 439
Score = 323 bits (828), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 181/439 (41%), Positives = 268/439 (61%), Gaps = 14/439 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MV+ +L S+ A++++ A IDE+ +N+ + +I RALLQ+DV K+V ++ +IK+
Sbjct: 1 MVMDKLSNSLQDALKKLVGAGRIDERTVNDVVKDIQRALLQSDVNVKMVMQLSKSIKERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+D+ G N R + + ++ EL K++ G T KP IM +GLQGSGKTTT K
Sbjct: 61 LDEDVPQGMNPREHVIRIVYEELMKIVGEG----TDIPLKPQKIMMIGLQGSGKTTTTAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A Y Q+KG KPA+VCADTFR GA+ QLK + FYG D V I G+
Sbjct: 117 LARYFQRKGLKPAVVCADTFRPGAYQQLKTLCESLNVAFYGEEGNPDAVGIVERGLAEID 176
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
K D+ I+DT+GRH E+ L +EM ++ A +PD + V+D+ IGQ A +QA+AF S
Sbjct: 177 K--YDVKIIDTAGRHSLESDLIDEMERI-HAISSPDYKLLVLDAGIGQQASEQAKAFNDS 233
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V + V+++K+DG AKGGGA+SAVAAT S + FIG GE + E F+ F+SRLLGMGD
Sbjct: 234 VGISGVVISKLDGTAKGGGAMSAVAATDSSIAFIGVGETPQDLEKFEADRFISRLLGMGD 293
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLP--GFS 358
M+K E + D+ ++ + +G FTL+ MY+Q + + KMGP+ Q+ MLP G
Sbjct: 294 LRSLMEKAEESLSEDELD--VESMMKGKFTLKDMYKQLEAMNKMGPMKQIMQMLPLGGMG 351
Query: 359 SELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVME 418
++ + E Q K+ +Y T+MDSMT EE+ +NP+++ SRI RI+ G+G V E
Sbjct: 352 MKVSDEDYEVTGQ-KMAQYKTLMDSMTEEEM--TNPRIIGSSRIKRISIGAGSNPETVRE 408
Query: 419 MLEEYKRLAKIWSKMKGLK 437
+L+ +K++ M+G K
Sbjct: 409 LLKYHKQMQNAMKGMRGGK 427
>gi|124486290|ref|YP_001030906.1| signal recognition particle protein Srp54 [Methanocorpusculum
labreanum Z]
gi|166222334|sp|A2STI3.1|SRP54_METLZ RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|124363831|gb|ABN07639.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Methanocorpusculum labreanum Z]
Length = 446
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 182/436 (41%), Positives = 267/436 (61%), Gaps = 14/436 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L L S+ A+++++ T+ID ++E + ++ RALL +DV KLV E+ IK
Sbjct: 1 MGLDTLSNSLKDAMKKLAGKTVIDRAAVDELVRDLQRALLSSDVNVKLVMELSKQIKARS 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPS-FTPKKGKPSVIMFVGLQGSGKTTTCT 119
+DL G N R + + ++ EL ++ GK + F+ K P I+ GLQGSGKTTT
Sbjct: 61 LDEDLPKGINAREHVLRIVYQELVNLV--GKEAEFSLK---PQKILMAGLQGSGKTTTTG 115
Query: 120 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
K Y Q+KG K + AD FR GA+ QL+ K +P YG E D V+I +G+
Sbjct: 116 KLCRYFQRKGLKVGAIGADNFRPGAYAQLETLCKKINVPSYGDPKEKDAVKIVKDGLAAL 175
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQ 239
K + D+IIVDT+GRH E L +E+ QV+ A +NPD V+D+++GQAA DQA+ F +
Sbjct: 176 K--DVDVIIVDTAGRHALEDDLIDEITQVN-AYLNPDHRWLVIDAALGQAARDQAKRFHE 232
Query: 240 SVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMG 299
++ + VIVTKMDG AKGGGA+SAVA T+S ++FIG GE +D+ E FD F+SRLLGMG
Sbjct: 233 AIGIDGVIVTKMDGTAKGGGAMSAVAETQSGIVFIGNGETIDDLERFDPNGFISRLLGMG 292
Query: 300 DWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSS 359
D ++K E M+ + + + G FTL MY+Q + + KMGP+ QV SMLP +
Sbjct: 293 DLKALVEKAEE--SMNAEDVDVNAMLRGKFTLNDMYKQLEAVQKMGPLKQVLSMLP-MGN 349
Query: 360 ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEM 419
+P + + K+K++ +MDSMT +ELD P L+N SR++R+A+GSG V EV ++
Sbjct: 350 MNVPSDALEGTADKMKKFRIIMDSMTPQELDE--PALINTSRMIRVAKGSGSSVEEVRDL 407
Query: 420 LEEYKRLAKIWSKMKG 435
++ YK + K +G
Sbjct: 408 IKYYKMMQKTLKGFRG 423
>gi|21227369|ref|NP_633291.1| signal recognition particle protein Srp54 [Methanosarcina mazei
Go1]
gi|23822172|sp|Q8PXF3.1|SRP54_METMA RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|20905728|gb|AAM30963.1| signal recognition particle subunit FFH/SRP54 [Methanosarcina mazei
Go1]
Length = 443
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 190/446 (42%), Positives = 266/446 (59%), Gaps = 25/446 (5%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MV+ +LG S+ A++++ A IDE+ +NE + +I RALLQADV KLV M IK+
Sbjct: 1 MVMEKLGDSLQGALKKLIGAGRIDERTVNEVVKDIQRALLQADVNVKLVMGMSQRIKERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+D AG N R + + ++ EL +++ G + KP IM VGLQGSGKTT+ K
Sbjct: 61 MKEDPPAGMNPREHVIRIVYQELMEIIGKG----ADIQLKPQTIMMVGLQGSGKTTSAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A Y Q+KG K +V ADTFR GA+ QLK + K + FYG D V I + G++
Sbjct: 117 LARYFQRKGLKAGVVAADTFRPGAYHQLKTLSEKLNVGFYGEEGNPDAVEITIHGLKAL- 175
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
E D+ IVDT+GRH EA L EEM ++ A PD V+D+ IGQ A QA AF S
Sbjct: 176 -EKYDIKIVDTAGRHALEADLIEEMERI-HAVAKPDHKFMVLDAGIGQQASQQAHAFNDS 233
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V + VI+TK+DG AKGGGALSAV+ TK+P+ FIG GE ++FE F+ F+SRLLGMGD
Sbjct: 234 VGITGVIITKLDGTAKGGGALSAVSETKAPIAFIGVGETPEDFEKFEADRFISRLLGMGD 293
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPG---- 356
M+K E + ++ ++ L +G FTL+ MY+Q + + KMGP+ Q+ SMLP
Sbjct: 294 LKSLMEKAEE--SLSEEDVNVEALMQGRFTLKDMYKQLEAMNKMGPLKQIMSMLPMGMGG 351
Query: 357 -----FSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGR 411
S E+ + + K+K Y +MDSMT +E+ ++PKL+ SRI RI+RGSG
Sbjct: 352 LGGVKLSDEMF-----QATSDKMKNYKVIMDSMTEDEM--ADPKLIGGSRIKRISRGSGC 404
Query: 412 QVREVMEMLEEYKRLAKIWSKMKGLK 437
+V E+L+ +K + +G K
Sbjct: 405 SPEDVRELLKYHKTMQTALKGFRGGK 430
>gi|452209852|ref|YP_007489966.1| Signal recognition particle, subunit Ffh SRP54 [Methanosarcina
mazei Tuc01]
gi|452099754|gb|AGF96694.1| Signal recognition particle, subunit Ffh SRP54 [Methanosarcina
mazei Tuc01]
Length = 443
Score = 322 bits (824), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 190/446 (42%), Positives = 266/446 (59%), Gaps = 25/446 (5%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MV+ +LG S+ A++++ A IDE+ +NE + +I RALLQADV KLV M IK+
Sbjct: 1 MVMEKLGDSLQGALKKLIGAGRIDERTVNEVVKDIQRALLQADVNVKLVMGMSQRIKERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+D AG N R + + ++ EL +++ G + KP IM VGLQGSGKTT+ K
Sbjct: 61 MKEDPPAGMNPREHVIRIVYQELMEIIGKG----ADIQLKPQTIMMVGLQGSGKTTSAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A Y Q+KG K +V ADTFR GA+ QLK + K + FYG D V I + G++ +
Sbjct: 117 LARYFQRKGLKAGVVAADTFRPGAYHQLKTLSEKLNVGFYGEEGNPDAVEITIHGLKALE 176
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
K D+ IVDT+GRH EA L EEM ++ A PD V+D+ IGQ A QA AF S
Sbjct: 177 K--YDIKIVDTAGRHALEADLIEEMERI-HAVAKPDHKFMVLDAGIGQQASQQAHAFNDS 233
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V + VI+TK+DG AKGGGALSAV+ TK+P+ FIG GE ++FE F+ F+SRLLGMGD
Sbjct: 234 VGITGVIITKLDGTAKGGGALSAVSETKAPIAFIGVGETPEDFEKFEADRFISRLLGMGD 293
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPG---- 356
M+K E + ++ ++ L +G FTL+ MY Q + + KMGP+ Q+ SMLP
Sbjct: 294 LKSLMEKAEE--SLSEEDVNVEALMQGRFTLKDMYNQLEAMNKMGPLKQIMSMLPMGMGG 351
Query: 357 -----FSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGR 411
S E+ + + K+K Y +MDSMT +E+ ++PKL+ SRI RI+RGSG
Sbjct: 352 LGGVKLSDEMF-----QATSDKMKNYKVIMDSMTEDEM--ADPKLIGGSRIKRISRGSGC 404
Query: 412 QVREVMEMLEEYKRLAKIWSKMKGLK 437
+V E+L+ +K + +G K
Sbjct: 405 SPEDVRELLKYHKTMQTALKGFRGGK 430
>gi|332797104|ref|YP_004458604.1| GTP-binding signal recognition particle SRP54 G-domain-containing
protein [Acidianus hospitalis W1]
gi|332694839|gb|AEE94306.1| GTP-binding signal recognition particle SRP54 G-domain protein
[Acidianus hospitalis W1]
Length = 449
Score = 321 bits (823), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 176/432 (40%), Positives = 270/432 (62%), Gaps = 10/432 (2%)
Query: 9 SISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAG 68
++ A+++ + +K + + + E+ ++L+ ADV KLV + IK+ + +
Sbjct: 4 NLRDAVRKFLTGSSSYDKAVEDFIKELQKSLISADVNVKLVFSLTNKIKERLKNEKPPTY 63
Query: 69 HNKRRIIQQAIFNELCKMLDPGK-PSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQK 127
+R + +++EL + K P P K P VIM VG+QG+GKTTT K AY+++K
Sbjct: 64 IERREWFIKIVYDELSNLFGGDKEPKVIPDK-IPYVIMLVGVQGTGKTTTAGKLAYFYKK 122
Query: 128 KGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLI 187
KG+K LV AD +R A +QL+Q + +P YG E D V IA GVE F E ++I
Sbjct: 123 KGFKVGLVGADVYRPAALEQLQQLGEQIGVPVYGEPGEKDAVGIAKRGVEKFLNEKMEII 182
Query: 188 IVDTSGRHK--QEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGA 245
IVDT+GRH +EAAL EEM+ + EA + PD V V+D+SIGQ A+D A F Q+ +G
Sbjct: 183 IVDTAGRHGYGEEAALLEEMKNIYEA-IKPDEVTLVIDASIGQKAYDLASKFNQASKIGT 241
Query: 246 VIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFM 305
+I+TKMDG AKGGGALSAVAAT + + FIGTGE +DE EVF+ + FV+R+LGMGD +
Sbjct: 242 IIITKMDGTAKGGGALSAVAATGATIKFIGTGEKIDELEVFNPRRFVARILGMGDIETIL 301
Query: 306 DKIHEVVPMDQQPELLQKL--SEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSS-ELM 362
+KI EV D+ + ++++ +G TLR +Y Q + KMGP+ ++F +LPG +
Sbjct: 302 EKIKEVENYDKMQKKMEEVISGKGKLTLRDVYNQLIALRKMGPLSKLFQLLPGIGMLGQI 361
Query: 363 PKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLEE 422
P+ + K + K+++++ +M+SMT EELD NP +++ SR+ RIA GSG ++ +V E++E
Sbjct: 362 PEDQLKVGEEKMRKWLAIMNSMTYEELD--NPSIIDKSRMRRIALGSGTEIEDVKELIEH 419
Query: 423 YKRLAKIWSKMK 434
Y + + +K
Sbjct: 420 YNLMQRTIKMLK 431
>gi|448417225|ref|ZP_21579243.1| signal recognition particle protein Srp54 [Halosarcina pallida JCM
14848]
gi|445678448|gb|ELZ30941.1| signal recognition particle protein Srp54 [Halosarcina pallida JCM
14848]
Length = 464
Score = 321 bits (823), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 180/464 (38%), Positives = 281/464 (60%), Gaps = 26/464 (5%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ ++ ++ + +DE ++E + EI R+LL ADV LV ++ ++I+
Sbjct: 1 MVLDNLGSSLRGSLDKLQGKSRLDEDDVDEIVREIQRSLLSADVDVSLVMDLSSSIEDRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ G + R + + ++ EL ++ G+ + P + P I+ GLQGSGKTTT K
Sbjct: 61 LHEEPPGGTSARDHVLKIVYEELVDLI--GESTDIPLE--PQTILLAGLQGSGKTTTAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KG +PA++ DTFR GA+DQ KQ +A++ FYG E DPV+IA EG+E
Sbjct: 117 MAWWFSTKGLRPAVIQTDTFRPGAYDQAKQMCEEAEVEFYGDPDEEDPVKIAREGMEA-- 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
E+ D+ IVDT+GRH E AL +E+ ++ E VNPD + V+D++IGQ A DQA+ F S
Sbjct: 175 TEDADIHIVDTAGRHALEEALIDEIEEI-ERQVNPDRSMLVLDAAIGQGAKDQAREFDDS 233
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
+ + V++TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 234 IGIDGVVITKLDGTAKGGGALTAVNETDSSIGFLGTGETVQDIERFEPNGFISRLLGMGD 293
Query: 301 WSGFMDKIHEVVPMDQQ------PELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSML 354
+++ + Q+ PE + K G+FTL+ M +Q + + KMGP+ QV M+
Sbjct: 294 LKQLSERVERAMQETQEGEDDWDPEDIMK---GSFTLKDMQKQMEAMNKMGPLDQVLDMI 350
Query: 355 P----GFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSG 410
P GF EL P +Q +++ + +MDSMT EEL+ NP+++ SR+ RIARGSG
Sbjct: 351 PGLGGGFKDEL-PDDAMDVTQDRMRSFDVIMDSMTEEELE--NPRIVGASRVRRIARGSG 407
Query: 411 RQVREVMEMLEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQ 454
+ V E+LE++K + + + +G+ G+M + + + Q
Sbjct: 408 KGEELVQELLEQHKMMERTIKQFQGM---GDGDMQRMMKKLQNQ 448
>gi|432328008|ref|YP_007246152.1| signal recognition particle GTPase [Aciduliprofundum sp. MAR08-339]
gi|432134717|gb|AGB03986.1| signal recognition particle GTPase [Aciduliprofundum sp. MAR08-339]
Length = 449
Score = 320 bits (821), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 184/454 (40%), Positives = 270/454 (59%), Gaps = 16/454 (3%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L LG S+ ++++S +DE ++ E + +I RALL+ADV+ L ++ N+++
Sbjct: 1 MLDSLGESLRNTLRKISKVGYVDESLIKEVVRDIQRALLKADVEVHLALKLSKNVERRAM 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
+ +G + R + + I+ EL +L K KP IM VGL G GKTTT K
Sbjct: 61 EEKPPSGMSHRDFLIKIIYEELVAILGREKEVAL----KPQKIMLVGLYGQGKTTTAGKL 116
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKK 181
A Y KKG ALV D R A++QLKQ + +P +G E D RIA E + ++
Sbjct: 117 AKYFHKKGLSVALVACDVHRPAAYEQLKQIGEQINVPVFGIPGEKDARRIASEAMRKIRE 176
Query: 182 ENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSV 241
I DTSGRH E L EE++ + E + PD + VMD++IGQ A QA+AF +V
Sbjct: 177 AQVK--IFDTSGRHALEDDLIEEIKDLKE-IIQPDEIFLVMDATIGQQAGKQAKAFHDAV 233
Query: 242 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 301
+ VI+TKMDG AKGGGALSAVAAT +PV+FIGTGEH+D+ E F+ F+SRLLGMGD
Sbjct: 234 GITGVIITKMDGSAKGGGALSAVAATGAPVVFIGTGEHLDDLEHFNPTRFISRLLGMGDL 293
Query: 302 SGFMDKIHEVVPMDQQ--PELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSS 359
++ E + MD++ ++++K+ G F L+ MYE ++ + K G + ++ +P F
Sbjct: 294 ETLLETAKE-LEMDEERAEKVMEKMMSGKFNLKDMYEIWEQMAKPGLLQKILYSIPFFKM 352
Query: 360 ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEM 419
+ K +ES+ K+KRY +MDSMT EEL+ NP+++ SRI RIARGSG+ +EV +
Sbjct: 353 GDIDKNMVEESEEKLKRYRIIMDSMTYEELE--NPEIIKASRIRRIARGSGKSEQEVRAL 410
Query: 420 LEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNA 453
L+EY R+ K +M+G + M AL R M +
Sbjct: 411 LKEYHRMRKAMKQMRG----NRKLMRALRRQMKS 440
>gi|229579027|ref|YP_002837425.1| GTP-binding signal recognition particle SRP54 G- domain-containing
protein [Sulfolobus islandicus Y.G.57.14]
gi|284997634|ref|YP_003419401.1| GTP-binding signal recognition particle SRP54, G- domain protein
[Sulfolobus islandicus L.D.8.5]
gi|259511388|sp|C3NDW4.1|SRP54_SULIY RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|228009741|gb|ACP45503.1| GTP-binding signal recognition particle SRP54 G- domain protein
[Sulfolobus islandicus Y.G.57.14]
gi|284445529|gb|ADB87031.1| GTP-binding signal recognition particle SRP54, G- domain protein
[Sulfolobus islandicus L.D.8.5]
Length = 447
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 174/434 (40%), Positives = 272/434 (62%), Gaps = 13/434 (2%)
Query: 9 SISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAG 68
+I A+++ + EK ++E + E+ ++L+ +DV KLV + IK+ +N + +
Sbjct: 4 NIRDAVRKFLTGSTPYEKAVDEFIKELQKSLISSDVNVKLVFSLTAKIKERLNKEKPPSV 63
Query: 69 HNKRRIIQQAIFNELCKMLDPGK-PSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQK 127
++ +++EL K+ K P+ P K P +IM VG+QGSGKTTT K AY++++
Sbjct: 64 LERKEWFISIVYDELSKLFGGDKEPNVNPTK-LPFIIMLVGVQGSGKTTTAGKLAYFYKR 122
Query: 128 KGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLI 187
+G+K LV AD +R A+DQL Q + +P YG + + IA +GV+TF K D+I
Sbjct: 123 RGYKVGLVAADVYRPAAYDQLLQLGNQIGVPVYGEPNNQNAIEIAKKGVDTFVKNKMDII 182
Query: 188 IVDTSGRH--KQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGA 245
IVDT+GRH +E L EEM+++ EA + PD VI V+D+SIGQ A+D A F Q+ +G+
Sbjct: 183 IVDTAGRHGYGEETKLLEEMKEIYEA-LKPDDVILVIDASIGQKAYDLASRFHQASPIGS 241
Query: 246 VIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFM 305
+I+TKMDG AKGGGALSAVAAT + + FIGTGE +DE E+F+ K +VSR+LGMGD +
Sbjct: 242 IIITKMDGTAKGGGALSAVAATGATIKFIGTGEKIDELEIFNAKRYVSRILGMGDIESIL 301
Query: 306 DKIHEVVPMDQQPELLQKLSE--GNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMP 363
+K+ + ++ + ++ + E G TLR +Y Q + KMGP+ +V +PG ++P
Sbjct: 302 EKVKGLEEYEKIQKKMEDVMEGKGKLTLRDVYAQIMALRKMGPLSKVLQHIPGLGV-MLP 360
Query: 364 KGRE---KESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEML 420
E K + KI+R++ ++SMT +EL+ NP +++ SR+ RIA GSG +V +V E+L
Sbjct: 361 TPSEDQLKLGEEKIRRWLAALNSMTYKELE--NPSIIDKSRMRRIAEGSGLEVEDVRELL 418
Query: 421 EEYKRLAKIWSKMK 434
E Y + K+ +K
Sbjct: 419 EWYNNMNKLLKMVK 432
>gi|227827525|ref|YP_002829305.1| GTP-binding signal recognition particle SRP54 G-domain-containing
protein [Sulfolobus islandicus M.14.25]
gi|229584728|ref|YP_002843230.1| GTP-binding signal recognition particle SRP54 G-domain [Sulfolobus
islandicus M.16.27]
gi|238619682|ref|YP_002914508.1| GTP-binding signal recognition particle SRP54 G-domain [Sulfolobus
islandicus M.16.4]
gi|385773194|ref|YP_005645760.1| GTP-binding signal recognition particle SRP54, G-domain [Sulfolobus
islandicus HVE10/4]
gi|385775828|ref|YP_005648396.1| GTP-binding signal recognition particle SRP54 G-domain-containing
protein [Sulfolobus islandicus REY15A]
gi|259511383|sp|C3N5B0.1|SRP54_SULIA RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|259511384|sp|C4KGX6.1|SRP54_SULIK RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|259511386|sp|C3MYM8.1|SRP54_SULIM RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|227459321|gb|ACP38007.1| GTP-binding signal recognition particle SRP54 G-domain protein
[Sulfolobus islandicus M.14.25]
gi|228019778|gb|ACP55185.1| GTP-binding signal recognition particle SRP54 G-domain [Sulfolobus
islandicus M.16.27]
gi|238380752|gb|ACR41840.1| GTP-binding signal recognition particle SRP54 G-domain [Sulfolobus
islandicus M.16.4]
gi|323474576|gb|ADX85182.1| GTP-binding signal recognition particle SRP54 G-domain protein
[Sulfolobus islandicus REY15A]
gi|323477308|gb|ADX82546.1| GTP-binding signal recognition particle SRP54, G-domain [Sulfolobus
islandicus HVE10/4]
Length = 447
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 174/434 (40%), Positives = 272/434 (62%), Gaps = 13/434 (2%)
Query: 9 SISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAG 68
+I A+++ + EK ++E + E+ ++L+ +DV KLV + IK+ +N + +
Sbjct: 4 NIRDAVRKFLTGSTPYEKAVDEFVKELQKSLISSDVNVKLVFSLTAKIKERLNKEKPPSV 63
Query: 69 HNKRRIIQQAIFNELCKMLDPGK-PSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQK 127
++ +++EL K+ K P+ P K P +IM VG+QGSGKTTT K AY++++
Sbjct: 64 LERKEWFISIVYDELSKLFGGDKEPNVNPTK-LPFIIMLVGVQGSGKTTTSGKLAYFYKR 122
Query: 128 KGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLI 187
+G+K LV AD +R A+DQL Q + +P YG + + IA +GV+TF K D+I
Sbjct: 123 RGYKVGLVAADVYRPAAYDQLLQLGNQIGVPVYGEPNNQNAIEIAKKGVDTFVKNKMDII 182
Query: 188 IVDTSGRH--KQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGA 245
IVDT+GRH +E L EEM+++ EA + PD VI V+D+SIGQ A+D A F Q+ +G+
Sbjct: 183 IVDTAGRHGYGEETKLLEEMKEIYEA-LKPDDVILVIDASIGQKAYDLASRFHQASPIGS 241
Query: 246 VIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFM 305
+I+TKMDG AKGGGALSAVAAT + + FIGTGE +DE E+F+ K +VSR+LGMGD +
Sbjct: 242 IIITKMDGTAKGGGALSAVAATGATIKFIGTGEKIDELEIFNAKRYVSRILGMGDIESIL 301
Query: 306 DKIHEVVPMDQQPELLQKLSE--GNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMP 363
+K+ + ++ + ++ + E G TLR +Y Q + KMGP+ +V +PG ++P
Sbjct: 302 EKVKGLEEYEKIQKKMEDVMEGKGKLTLRDVYAQIMALRKMGPLSKVLQHIPGLGV-MLP 360
Query: 364 KGRE---KESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEML 420
E K + KI+R++ ++SMT +EL+ NP +++ SR+ RIA GSG +V +V E+L
Sbjct: 361 TPSEDQLKLGEEKIRRWLAALNSMTYKELE--NPSIIDKSRMRRIAEGSGLEVEDVRELL 418
Query: 421 EEYKRLAKIWSKMK 434
E Y + K+ +K
Sbjct: 419 EWYNNMNKLLKMVK 432
>gi|229582222|ref|YP_002840621.1| GTP-binding signal recognition particle SRP54 G-domain [Sulfolobus
islandicus Y.N.15.51]
gi|259511387|sp|C3NHT9.1|SRP54_SULIN RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|228012938|gb|ACP48699.1| GTP-binding signal recognition particle SRP54 G-domain [Sulfolobus
islandicus Y.N.15.51]
Length = 447
Score = 320 bits (819), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 174/434 (40%), Positives = 272/434 (62%), Gaps = 13/434 (2%)
Query: 9 SISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAG 68
+I A+++ + EK ++E + E+ ++L+ +DV KLV + IK+ +N + +
Sbjct: 4 NIRDAVRKFLTRSTPYEKAVDEFIKELQKSLISSDVNVKLVFSLTAKIKERLNKEKPPSV 63
Query: 69 HNKRRIIQQAIFNELCKMLDPGK-PSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQK 127
++ +++EL K+ K P+ P K P +IM VG+QGSGKTTT K AY++++
Sbjct: 64 LERKEWFISIVYDELSKLFGGDKEPNVNPTK-LPFIIMLVGVQGSGKTTTAGKLAYFYKR 122
Query: 128 KGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLI 187
+G+K LV AD +R A+DQL Q + +P YG + + IA +GV+TF K D+I
Sbjct: 123 RGYKVGLVAADVYRPAAYDQLLQLGNQIGVPVYGEPNNQNAIEIAKKGVDTFVKNKMDII 182
Query: 188 IVDTSGRH--KQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGA 245
IVDT+GRH +E L EEM+++ EA + PD VI V+D+SIGQ A+D A F Q+ +G+
Sbjct: 183 IVDTAGRHGYGEETKLLEEMKEIYEA-LKPDDVILVIDASIGQKAYDLASRFHQASPIGS 241
Query: 246 VIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFM 305
+I+TKMDG AKGGGALSAVAAT + + FIGTGE +DE E+F+ K +VSR+LGMGD +
Sbjct: 242 IIITKMDGTAKGGGALSAVAATGATIKFIGTGEKIDELEIFNAKRYVSRILGMGDIESIL 301
Query: 306 DKIHEVVPMDQQPELLQKLSE--GNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMP 363
+K+ + ++ + ++ + E G TLR +Y Q + KMGP+ +V +PG ++P
Sbjct: 302 EKVKGLEEYEKIQKKMEDVMEGKGKLTLRDVYAQIMALRKMGPLSKVLQHIPGLGV-MLP 360
Query: 364 KGRE---KESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEML 420
E K + KI+R++ ++SMT +EL+ NP +++ SR+ RIA GSG +V +V E+L
Sbjct: 361 TPSEDQLKLGEEKIRRWLAALNSMTYKELE--NPSIIDKSRMRRIAEGSGLEVEDVRELL 418
Query: 421 EEYKRLAKIWSKMK 434
E Y + K+ +K
Sbjct: 419 EWYNNMNKLLKMVK 432
>gi|227830212|ref|YP_002831992.1| GTP-binding signal recognition particle SRP54 G- domain-containing
protein [Sulfolobus islandicus L.S.2.15]
gi|259511385|sp|C3MPN4.1|SRP54_SULIL RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|227456660|gb|ACP35347.1| GTP-binding signal recognition particle SRP54 G- domain protein
[Sulfolobus islandicus L.S.2.15]
Length = 447
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 173/434 (39%), Positives = 272/434 (62%), Gaps = 13/434 (2%)
Query: 9 SISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAG 68
+I A+++ + EK ++E + E+ ++L+ +DV KLV + IK+ +N + +
Sbjct: 4 NIRDAVRKFLTGSTPYEKAVDEFIKELQKSLISSDVNVKLVFSLTAKIKERLNKEKPPSV 63
Query: 69 HNKRRIIQQAIFNELCKMLDPGK-PSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQK 127
++ +++EL K+ K P+ P + P +IM VG+QGSGKTTT K AY++++
Sbjct: 64 LERKEWFISIVYDELSKLFGGDKEPNVNPTR-LPFIIMLVGVQGSGKTTTAGKLAYFYKR 122
Query: 128 KGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLI 187
+G+K LV AD +R A+DQL Q + +P YG + + IA +GV+TF K D+I
Sbjct: 123 RGYKVGLVAADVYRPAAYDQLLQLGNQIGVPVYGEPNNQNAIEIAKKGVDTFVKNKMDII 182
Query: 188 IVDTSGRH--KQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGA 245
IVDT+GRH +E L EEM+++ EA + PD VI V+D+SIGQ A+D A F Q+ +G+
Sbjct: 183 IVDTAGRHGYGEETKLLEEMKEIYEA-LKPDDVILVIDASIGQKAYDLASRFHQASPIGS 241
Query: 246 VIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFM 305
+I+TKMDG AKGGGALSAVAAT + + FIGTGE +DE E+F+ K +VSR+LGMGD +
Sbjct: 242 IIITKMDGTAKGGGALSAVAATGATIKFIGTGEKIDELEIFNAKRYVSRILGMGDIESIL 301
Query: 306 DKIHEVVPMDQQPELLQKLSE--GNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMP 363
+K+ + ++ + ++ + E G TLR +Y Q + KMGP+ +V +PG ++P
Sbjct: 302 EKVKGLEEYEKIQKKMEDVMEGKGKLTLRDVYAQIMALRKMGPLSKVLQHIPGLGV-MLP 360
Query: 364 KGRE---KESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEML 420
E K + KI+R++ ++SMT +EL+ NP +++ SR+ RIA GSG +V +V E+L
Sbjct: 361 TPSEDQLKLGEEKIRRWLAALNSMTYKELE--NPSIIDKSRMRRIAEGSGLEVEDVRELL 418
Query: 421 EEYKRLAKIWSKMK 434
E Y + K+ +K
Sbjct: 419 EWYNNMNKLLKMVK 432
>gi|325957954|ref|YP_004289420.1| Signal recognition 54 kDa protein [Methanobacterium sp. AL-21]
gi|325329386|gb|ADZ08448.1| Signal recognition 54 kDa protein [Methanobacterium sp. AL-21]
Length = 447
Score = 319 bits (817), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 172/423 (40%), Positives = 267/423 (63%), Gaps = 7/423 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
++L LG ++++ +++++ IIDE+V+ E + +I RAL+Q+DV KLV + I+
Sbjct: 4 IMLGNLGKNLTKTMKKLAGMAIIDEEVVKEVIKDIQRALIQSDVNIKLVLNLSKTIEDRS 63
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ G + + + ++ EL +L K +P I+F+GLQGSGKTT+ K
Sbjct: 64 LNEEPPKGVTPKEHVVRIVYEELVNLLGSSAQEVEIDK-RPYKILFMGLQGSGKTTSIGK 122
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
Y QKKG+ PA+V DT+R A++QL Q +P YG + D + +A G++ K
Sbjct: 123 LTKYLQKKGFNPAIVSTDTWRPAAYEQLLQLTEPMNVPVYGDHENKDALDLARTGLKAAK 182
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
K D+IIVDT+GRHK+E+ L EM +S V+PD VI V+D +IGQ A +QA AF +
Sbjct: 183 KN--DVIIVDTAGRHKEESDLLAEMESLS-TIVDPDEVIMVIDGTIGQQAGEQALAFNNA 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
+G++I+TK+DG AKGGGALSAVA +P+ FIGTGE +++FE FD F+SRLLGMGD
Sbjct: 240 TKIGSIIITKLDGSAKGGGALSAVAEIGAPIKFIGTGERVEDFEAFDPDRFISRLLGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
+++ E+ + + + G FTL+ MY QF+ + KMGP+ QV +M+PG +
Sbjct: 300 IRTLLERAEEIAEEEGDMGSVDAMLSGKFTLKDMYSQFEMMNKMGPMQQVMNMIPGAGGK 359
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEML 420
L PK + ++ K+ +Y +MDSMT++EL+ +P+++ SR+ RIARGSG + +V E+L
Sbjct: 360 L-PKNASQVTEEKLSKYKILMDSMTDQELE--HPEVIKQSRVKRIARGSGMKNEDVKELL 416
Query: 421 EEY 423
+ Y
Sbjct: 417 KYY 419
>gi|374633768|ref|ZP_09706133.1| signal recognition particle GTPase [Metallosphaera yellowstonensis
MK1]
gi|373523556|gb|EHP68476.1| signal recognition particle GTPase [Metallosphaera yellowstonensis
MK1]
Length = 447
Score = 318 bits (816), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 177/433 (40%), Positives = 270/433 (62%), Gaps = 14/433 (3%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I A+++ T + ++E + ++ +AL+ +DVQ KLV + IK+ + +
Sbjct: 5 IRDAVRKFLGGTTSYDVAVDEFIKDLQKALISSDVQVKLVFSLTNKIKERLKKESPPTSL 64
Query: 70 NKRRIIQQAIFNELCKMLDPGK-PSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKK 128
+R + +++EL + K P P P VIM VG+QG+GKTTT K AY+++K+
Sbjct: 65 ERREWFIKIVYDELSSLFGGDKEPEVNPG-SLPYVIMLVGVQGTGKTTTAGKLAYFYKKR 123
Query: 129 GWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLII 188
G+K ALV AD +R A +QL Q + +P YG E D V IA GVE E +LII
Sbjct: 124 GYKVALVGADVYRPAALEQLMQLGKQIGVPVYGEPGEKDAVGIAKRGVEKLLSEKYELII 183
Query: 189 VDTSGRH--KQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAV 246
VDT+GRH +EA L EEM+++ E +V P+ VI V+D+S+GQ A+D A+ F ++ VG++
Sbjct: 184 VDTAGRHGYGEEAKLLEEMKEIYE-SVKPNEVILVIDASLGQKAYDLAKRFHEASKVGSI 242
Query: 247 IVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMD 306
I+TKMDG AKGGGALSAV AT +P+ FIGTGE +DE EVF+ K FV+R+LGMGD ++
Sbjct: 243 IITKMDGTAKGGGALSAVVATGAPIKFIGTGEKIDELEVFNPKRFVARVLGMGDVEAIIE 302
Query: 307 KIHEVVPMDQQPELLQKLSEG--NFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELM-- 362
KI V + + +Q+++ G TLR +Y+Q + KMGP+ ++ ++PG + LM
Sbjct: 303 KIKAVEDYEGIQKKMQEVTSGKSRLTLRDLYKQIIAMRKMGPLSKILQLMPGIN--LMGD 360
Query: 363 -PKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLE 421
P+ + K + K++R++ +M+SMT EELD NP L++ R+ RIA GSG +V EV E++E
Sbjct: 361 IPEDQIKVGEKKMQRWLAIMNSMTYEELD--NPSLLDKQRMKRIAMGSGTEVEEVKELIE 418
Query: 422 EYKRLAKIWSKMK 434
+ + + +K
Sbjct: 419 HFNTIQRTLKVLK 431
>gi|386003024|ref|YP_005921323.1| Signal sequence recognition 54 kDa protein [Methanosaeta
harundinacea 6Ac]
gi|357211080|gb|AET65700.1| Signal sequence recognition 54 kDa protein [Methanosaeta
harundinacea 6Ac]
Length = 446
Score = 318 bits (815), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 183/437 (41%), Positives = 270/437 (61%), Gaps = 14/437 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LGGS+ A++++++A+ ID++V++E + EI RALLQADV KLV + I+
Sbjct: 1 MVLDSLGGSLRGALKKIASASRIDKQVVDEAVREIQRALLQADVNVKLVMNLSNRIRDRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ A G N R + ++ EL ++ P K+ IM VGLQGSGKTTT K
Sbjct: 61 LSEKPAPGMNPREHVINIVYQELINLVGKSSPVTLEKQ----TIMLVGLQGSGKTTTAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A + Q+KG + A+VCADTFRAGAFDQLK K + FYG D +A G+E +
Sbjct: 117 LATFFQRKGLRSAVVCADTFRAGAFDQLKALCEKQGVFFYGEKGNPDAPAVARRGLEASR 176
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
K D++IVDT+GRH E L +EM + +A V D + VMD+++GQ A +QA+AF ++
Sbjct: 177 K--YDIVIVDTAGRHALEKDLIQEMMDI-DAVVAADHKLLVMDAALGQQASEQAKAFNKA 233
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V + VI+TK+DG AKGGGA+SAVA T S V FIG GE ++ E F+ F+SRLLGMGD
Sbjct: 234 VGITGVIITKLDGTAKGGGAMSAVAETNSSVAFIGVGETPNDLERFEADRFISRLLGMGD 293
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLP--GFS 358
+++ E ++++ + ++ L G FTL+ M +Q + I KMGP+ Q+ MLP G
Sbjct: 294 IKTLIERAQE-TKVEEEVD-VEALMRGKFTLKDMCKQMEAINKMGPLKQIMQMLPLGGMG 351
Query: 359 SELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVME 418
+L + + ++ ++++Y +M SMT EL+ +PK++ SRI RI+RGSG V E
Sbjct: 352 LDLSDQ-EYQVTKDRLEKYRVIMSSMTEAELE--DPKIITASRIKRISRGSGTPPELVRE 408
Query: 419 MLEEYKRLAKIWSKMKG 435
+L+ +K + K M+G
Sbjct: 409 LLKSHKAMQKALKGMRG 425
>gi|385806157|ref|YP_005842555.1| signal recognition 54 kDa protein [Fervidicoccus fontis Kam940]
gi|383796020|gb|AFH43103.1| signal recognition 54 kDa protein [Fervidicoccus fontis Kam940]
Length = 453
Score = 317 bits (812), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 168/437 (38%), Positives = 275/437 (62%), Gaps = 8/437 (1%)
Query: 3 LAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNL 62
++ + I AI++ ++T E+ + E + E+ R L+++DV K+V E + I+K
Sbjct: 1 MSNIFSGIKEAIKKFLSSTSPYEQSVEEFIRELQRILIKSDVNVKVVFEFTSKIRKRALE 60
Query: 63 DDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYA 122
+ G ++R + ++ EL +L + K KP VIM VG+QGSGKTTT K A
Sbjct: 61 EKPPQGVSRRDWFIKIVYEELISLLGGEEELNVLPKKKPYVIMLVGVQGSGKTTTAAKLA 120
Query: 123 YYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKE 182
+Y++ +G++ L+ ADTFRAGA++QLKQ A K + F+G +DP I+ +G+E +
Sbjct: 121 WYYKNRGYRVGLIAADTFRAGAYEQLKQLAEKVGVEFWGDKGLNDPAEISRKGLEYHLSK 180
Query: 183 NCDLIIVDTSGRHK--QEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
++II+DT+GRH +E+ L +EM+ +++A V PD VI V+D+SIGQ A+D A+ F ++
Sbjct: 181 KAEIIIIDTAGRHGYGEESKLIDEMKAIADA-VKPDEVILVLDASIGQKAYDLAKKFHEA 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
+G++I+TK+DG AKGGGA+SA+AAT + V F+GTGE +DE E F K F SR+LGMGD
Sbjct: 240 TPIGSIIITKLDGTAKGGGAISAIAATGAKVKFVGTGEKVDEIEPFRPKNFASRILGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
+++++ + ++ E+ L GN ++++Y+Q + I MGPIG++ M+PG S
Sbjct: 300 IEAILERVYSTMSQNELEEMADSLMSGNLNMKLIYKQIKQIRSMGPIGKILRMIPGLSMS 359
Query: 361 L-MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLM--NDSRIMRIARGSGRQVREVM 417
L +G K S+ K+ ++ +++SMT EE++ P+L+ SRI RIA G+G +V
Sbjct: 360 LPEDEGALKVSEKKMDMWLNIINSMTYEEME--KPELLEREKSRIRRIAIGAGVAQEDVR 417
Query: 418 EMLEEYKRLAKIWSKMK 434
E+L Y + K+ ++K
Sbjct: 418 ELLNYYNYIKKLLKQLK 434
>gi|84490317|ref|YP_448549.1| signal recognition particle protein Srp54 [Methanosphaera
stadtmanae DSM 3091]
gi|121731822|sp|Q2NE47.1|SRP54_METST RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|84373636|gb|ABC57906.1| signal recognition particle, 54 kDa protein [Methanosphaera
stadtmanae DSM 3091]
Length = 444
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 177/451 (39%), Positives = 276/451 (61%), Gaps = 10/451 (2%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L L S+++ +++++ +IID+K L + +I RAL+Q+DV K+V + I+K
Sbjct: 1 MLEGLSESLTQTMKKLAGMSIIDKKTLKDVTKDIQRALIQSDVNVKVVFGLTKKIEKRAL 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
++L G + + + + ++ EL ++ KP KP IM +GLQGSGKTTT K
Sbjct: 61 EEELPKGLSPKEHVMRIVYQELVNLIGE-KPEELKINRKPYKIMMLGLQGSGKTTTTAKL 119
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKK 181
+ +KKG A+VC DT+R A++QL+Q +P +G D + +A +G+E
Sbjct: 120 VKHLKKKGHTSAIVCTDTWRPAAYEQLRQLTEPLDVPVFGDPENKDAIDLAKKGLEKCGS 179
Query: 182 ENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSV 241
+ D+I+VDT+GRHK+E L +EM ++S+ V PD VI V+D +IGQ A QA+ FK++
Sbjct: 180 K-YDVILVDTAGRHKEEKDLLDEMAELSQ-IVQPDEVILVIDGTIGQQARSQAETFKKTT 237
Query: 242 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 301
+G++IV+K+DG AKGGGALSAVA ++P+ FIGTGE +D+FE FD + F+SRLLGMGD
Sbjct: 238 DIGSIIVSKLDGSAKGGGALSAVAEIRAPIKFIGTGERVDDFEAFDPERFISRLLGMGDL 297
Query: 302 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 361
++K EV E++ + G FTL+ M Q + + KMGPI Q+ ++PG ++L
Sbjct: 298 DTLIEKAAEVTSEKSDKEMIDSIISGKFTLKDMENQLEMMNKMGPIQQIMKLIPGLGNQL 357
Query: 362 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLE 421
P K ++ K+ Y +M+SMT EL+ NP+++ SRI RI+RG+G +V ++L+
Sbjct: 358 -PANASKVTEEKLGMYKILMNSMTTYELE--NPEVIKKSRINRISRGAGLTNDDVKDLLK 414
Query: 422 EYKRLAKIWSKMKGL-KIPKKGEMSALSRNM 451
Y K +KG+ K G M L R+M
Sbjct: 415 YYNVTKK---ALKGMGKRNMSGPMGKLMRHM 442
>gi|448589278|ref|ZP_21649437.1| signal recognition particle protein Srp54 [Haloferax elongans ATCC
BAA-1513]
gi|445735706|gb|ELZ87254.1| signal recognition particle protein Srp54 [Haloferax elongans ATCC
BAA-1513]
Length = 461
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 173/445 (38%), Positives = 270/445 (60%), Gaps = 21/445 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ ++ ++ + IDE + E + EI R+LL ADV LV ++ +IK
Sbjct: 1 MVLDNLGSSLRGSLDKLRGKSRIDEDDVQEIVKEIQRSLLSADVDVSLVMDLSDSIKTRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ G + R + + ++ EL ++ G+ + P + + IM GLQGSGKTTT K
Sbjct: 61 LEEEPPGGTSARDHVLKIVYEELVSLI--GESTEIPLESQ--TIMLAGLQGSGKTTTSAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KKG +PA++ DTFR GA+DQ KQ +A++ FYG DPV+IA EG+E
Sbjct: 117 MAWWFSKKGLRPAVIQTDTFRPGAYDQAKQMCERAEVDFYGDPDCDDPVQIAREGLEA-- 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
E+ D+ IVDT+GRH E L E+ ++ E V PDL + V+D++IGQ A +QAQ F +S
Sbjct: 175 TEDADVHIVDTAGRHALEDDLIAEIEEI-EGVVQPDLNLLVLDAAIGQGAKEQAQQFDES 233
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
+ +G V++TK+DG AKGGGAL+AV T S + F+G GE + + E F+ F+SRLLGMGD
Sbjct: 234 IGIGGVVITKLDGTAKGGGALTAVNETDSSIAFLGMGETVQDIERFEPNGFISRLLGMGD 293
Query: 301 WSGFMDKIHEVVP------MDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSML 354
+++ + D PE + K G+FTL+ M +Q + + KMGP+ QV M+
Sbjct: 294 LKQLSERVERAMAETTAEDEDWDPEEMMK---GSFTLKDMQKQMEAMNKMGPLDQVLDMI 350
Query: 355 PGFSSEL---MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGR 411
PG L +P ++ +++ + +MDSMT+EEL+ NP+++ SR+ RIA+GSGR
Sbjct: 351 PGLGGGLKDQLPDDAMDVTKDRMRSFEIIMDSMTDEELE--NPRIIGASRVQRIAQGSGR 408
Query: 412 QVREVMEMLEEYKRLAKIWSKMKGL 436
+ E+LE+++ + + + +G+
Sbjct: 409 DEETIQELLEQHRMMERTIKQFQGM 433
>gi|355571041|ref|ZP_09042311.1| Signal recognition 54 kDa protein [Methanolinea tarda NOBI-1]
gi|354826323|gb|EHF10539.1| Signal recognition 54 kDa protein [Methanolinea tarda NOBI-1]
Length = 440
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 169/434 (38%), Positives = 267/434 (61%), Gaps = 12/434 (2%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L +LG S+ A+++++ T++D + E + ++ RAL+QADV +LV ++ IKK
Sbjct: 1 MLDRLGTSLKDAVKKLAGKTVVDRAAVEELVRDLQRALIQADVNVRLVMQLSEAIKKRAL 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
+ G R + + ++ EL +++ S K +P VI+ GLQGSGKTTT K
Sbjct: 61 EEQPPKGMTVREHVLRIVYQELVRLVG----SAGEVKLEPQVILMAGLQGSGKTTTTAKL 116
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKK 181
A Y Q+KG + A++CADTFR GAFDQL ++ +P +G+ E D ++I EG+++
Sbjct: 117 ARYFQRKGLRVAVICADTFRPGAFDQLNTLCSRIHVPCFGNPGEKDALKIVREGLKSLS- 175
Query: 182 ENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSV 241
+ ++II+DT GRH E+ L E+ + +A + V+D+++GQ A +QA+ F +++
Sbjct: 176 -SAEVIIIDTQGRHALESDLIREIIDI-QAIASAQHRWLVIDAALGQQAAEQARKFHEAI 233
Query: 242 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 301
S+ VI+TKMDG AKGGGALSAVA T+S ++FIG+GE +D+ E FD F+SRLLGMGD
Sbjct: 234 SIDGVIITKMDGTAKGGGALSAVAETRSGIVFIGSGETIDDLERFDPDGFISRLLGMGDL 293
Query: 302 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 361
++K E + + + + G F+LR MY Q + + +MGP+ Q+ SMLP + E+
Sbjct: 294 KALVEKAEETLAAAEVD--VNAMLRGKFSLRDMYNQLEAVTRMGPLKQIMSMLPLGNMEI 351
Query: 362 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLE 421
P+ + K++RY +MDSMT E+D +P ++ SRI RIARG+G EV E+L
Sbjct: 352 -PEDAYDITSTKMQRYRIIMDSMTAAEMD--DPSVIGSSRIQRIARGAGASPEEVRELLR 408
Query: 422 EYKRLAKIWSKMKG 435
YK + + ++G
Sbjct: 409 YYKMMKRALKGVRG 422
>gi|389860812|ref|YP_006363052.1| GTP-binding signal recognition particle SRP54, G- domain protein
[Thermogladius cellulolyticus 1633]
gi|388525716|gb|AFK50914.1| GTP-binding signal recognition particle SRP54, G- domain protein
[Thermogladius cellulolyticus 1633]
Length = 447
Score = 315 bits (808), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 167/430 (38%), Positives = 266/430 (61%), Gaps = 15/430 (3%)
Query: 25 EKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELC 84
E +NE + E+ + L+++DV +LV ++ IK+ + G +R ++ +L
Sbjct: 20 ETSVNEFVKELQKELIRSDVNVRLVMDLTKKIKERAAEERPPPGLTRRDWFLSIVYEQLV 79
Query: 85 KMLD-PGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAG 143
+ P +P P K KP V++ VGLQGSGKTTT K AY+++ +G+K LV ADTFR G
Sbjct: 80 NLFGGPERPQVKPPK-KPWVVLLVGLQGSGKTTTAGKLAYFYKLEGYKVGLVAADTFRPG 138
Query: 144 AFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFE 203
A++QLK +P YG D V IAV+GVE F+++ D+II+DT+GRH +E L
Sbjct: 139 AYEQLKTLGEAVGVPVYGEPGSKDAVSIAVKGVEFFREKGFDVIIIDTAGRHHREEDLLA 198
Query: 204 EMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSA 263
EM ++ V PD V+ V+D+SIGQ AF+ A F VG++IVTK+DG AKGGGALSA
Sbjct: 199 EMEDIA-GRVRPDEVVLVLDASIGQQAFEVASKFHNKTPVGSIIVTKLDGTAKGGGALSA 257
Query: 264 VAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQK 323
VAAT + + F+GTGE +DE EVFD K FV+R++G+GD G ++++ + ++ + ++
Sbjct: 258 VAATGARIKFVGTGEKIDELEVFDPKRFVARIMGLGDLEGLLERVKK-AKVELSEKDVED 316
Query: 324 LSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDS 383
+ EG +RI+Y+Q ++ KMGP+ ++ M+PG + + K + K+++++ ++S
Sbjct: 317 ILEGRVNMRIVYKQLVSLRKMGPLRKILEMIPGLQVRMPVEVDSKTLEEKMEKWLAAINS 376
Query: 384 MTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMK--------- 434
MT EELD NP++++ SR+ RI+ G+G +V +L++Y+ + I ++K
Sbjct: 377 MTYEELD--NPEVIDKSRVKRISYGAGVDPEDVKALLKQYEAVKSISKQLKRQKNLLAKM 434
Query: 435 GLKIPKKGEM 444
GL K GE+
Sbjct: 435 GLDTKKLGEL 444
>gi|448578870|ref|ZP_21644246.1| signal recognition particle protein Srp54 [Haloferax larsenii JCM
13917]
gi|445725453|gb|ELZ77077.1| signal recognition particle protein Srp54 [Haloferax larsenii JCM
13917]
Length = 461
Score = 315 bits (807), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 173/445 (38%), Positives = 270/445 (60%), Gaps = 21/445 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ ++ ++ + IDE + E + EI R+LL ADV LV ++ +IK
Sbjct: 1 MVLDNLGSSLRGSLDKLRGKSRIDEDDVQEIVKEIQRSLLSADVDVSLVMDLSDSIKTRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ G + R + + ++ EL ++ G+ + P + + IM GLQGSGKTTT K
Sbjct: 61 LEEEPPGGTSARDHVLKIVYEELVSLI--GESTDIPLESQ--TIMLAGLQGSGKTTTSAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KKG +PA++ DTFR GA+DQ KQ +A++ FYG DPV+IA EG+E
Sbjct: 117 MAWWFSKKGLRPAVIQTDTFRPGAYDQAKQMCERAEVDFYGDPDCDDPVQIAREGLEA-- 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
E+ D+ IVDT+GRH E L E+ ++ E V PDL + V+D++IGQ A +QAQ F +S
Sbjct: 175 TEDADVHIVDTAGRHALEDDLIAEIEEI-EGVVQPDLNLLVLDAAIGQGAKEQAQQFDES 233
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
+ +G V++TK+DG AKGGGAL+AV T S + F+G GE + + E F+ F+SRLLGMGD
Sbjct: 234 IGIGGVVITKLDGTAKGGGALTAVNETDSSIGFLGMGETVQDIERFEPNGFISRLLGMGD 293
Query: 301 WSGFMDKIHEVVP------MDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSML 354
+++ + D PE + K G+FTL+ M +Q + + KMGP+ QV M+
Sbjct: 294 LKQLSERVERAMAETTAEDEDWDPEEMMK---GSFTLKDMQKQMEAMNKMGPLDQVLDMI 350
Query: 355 PGFSSEL---MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGR 411
PG L +P ++ +++ + +MDSMT+EEL+ NP+++ SR+ RIA+GSGR
Sbjct: 351 PGLGGGLKDQLPDDAMDVTKDRMRSFEIIMDSMTDEELE--NPRIIGASRVQRIAQGSGR 408
Query: 412 QVREVMEMLEEYKRLAKIWSKMKGL 436
+ E+LE+++ + + + +G+
Sbjct: 409 DEETIQELLEQHRMMERTIKQFQGM 433
>gi|448622352|ref|ZP_21669046.1| signal recognition particle protein Srp54 [Haloferax denitrificans
ATCC 35960]
gi|445754434|gb|EMA05839.1| signal recognition particle protein Srp54 [Haloferax denitrificans
ATCC 35960]
Length = 464
Score = 315 bits (806), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 173/433 (39%), Positives = 263/433 (60%), Gaps = 21/433 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ ++ ++ + +DE + E + EI R+LL ADV LV ++ +IK
Sbjct: 1 MVLDNLGSSLRGSLDKLRGKSRLDEDDVQEIVKEIQRSLLSADVDVSLVMDLSDSIKTRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ G N R + + ++ EL ++ G+ + P + + IM GLQGSGKTTT K
Sbjct: 61 LEEEPPGGTNARDHVLKIVYEELVDLI--GESTEIPLESQ--TIMLAGLQGSGKTTTSAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KKG +PA++ DTFR GA+DQ KQ +A++ FYG DPV+IA EG+E
Sbjct: 117 MAWWFSKKGLRPAVIQTDTFRPGAYDQAKQMCERAEVDFYGDPDCDDPVQIAREGLEA-- 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
E+ D+ IVDT+GRH E L E+ ++ E V PDL + V+D++IGQ A DQAQ F +S
Sbjct: 175 TEDADVHIVDTAGRHALEDDLIAEIEEI-EGVVQPDLNLLVLDAAIGQGAKDQAQQFDES 233
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
+ +G V++TK+DG AKGGGAL+AV T S + F+G GE + + E F+ F+SRLLGMGD
Sbjct: 234 IGIGGVVITKLDGTAKGGGALTAVNETDSSIAFLGMGETVQDIERFEPNGFISRLLGMGD 293
Query: 301 WSGFMDKIHEVVP------MDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSML 354
+++ + D PE + K GNFTL+ M +Q + + KMGP+ QV M+
Sbjct: 294 LKQLSERVERAMSETQAEDEDWDPEEMMK---GNFTLKDMQKQMEAMDKMGPLDQVLDMI 350
Query: 355 PGFSS---ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGR 411
PGF + +P ++ +++ + +MDSMT EEL+ NP+ + SR+ RIA+GSG+
Sbjct: 351 PGFGGGIKDQLPDDAMDVTKDRMRAFEVIMDSMTEEELE--NPRKVGASRVKRIAQGSGQ 408
Query: 412 QVREVMEMLEEYK 424
+ E+LE+++
Sbjct: 409 DEETIQELLEQHR 421
>gi|154151417|ref|YP_001405035.1| signal recognition particle protein Srp54 [Methanoregula boonei
6A8]
gi|153999969|gb|ABS56392.1| GTP-binding signal recognition particle SRP54, G- domain
[Methanoregula boonei 6A8]
Length = 441
Score = 314 bits (805), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 173/430 (40%), Positives = 264/430 (61%), Gaps = 12/430 (2%)
Query: 6 LGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDL 65
L GS+ A+++++ ++D ++E + + RALL ADV KLV ++ I+ ++L
Sbjct: 5 LSGSLKDALKKLAGKAVVDRAAVDELVKNLQRALLSADVNVKLVMDLSKAIRTRSLDEEL 64
Query: 66 AAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYH 125
N R + + ++ EL +++ + K +P VI+ GLQGSGKTTT K A Y
Sbjct: 65 PKNTNVREHVLRIVYQELVRLV----YASADLKLEPQVILMAGLQGSGKTTTTAKIARYF 120
Query: 126 QKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCD 185
QKKG K ++CADTFR GA+DQL K +P +G+ +D +I EG+ K + +
Sbjct: 121 QKKGMKVGVICADTFRPGAYDQLSTLCAKINVPCFGNPKVTDARQIVREGLVAVKDQ--E 178
Query: 186 LIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGA 245
+IIVDT GRH E L +E+ ++ A V+D+++GQ A +QA+ F +++ +
Sbjct: 179 VIIVDTQGRHALEPDLIQEIIDLN-ALTKASHRWLVIDAALGQQASEQAKRFHEAIGIDG 237
Query: 246 VIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFM 305
VI+TKMDG AKGGGALSAVA TKS ++FIG GE +++ E FD F+SRLLGMGD +
Sbjct: 238 VIITKMDGTAKGGGALSAVAETKSGIVFIGAGETIEDLERFDANGFISRLLGMGDLQALV 297
Query: 306 DKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKG 365
+K+ E D+ ++ + +G+FTLR MY+Q + + KMGP+ Q+ SMLP + +L P+G
Sbjct: 298 EKVQEAQMADEVD--MEAMMKGHFTLRDMYKQLEALNKMGPLKQIMSMLPMGNMQL-PEG 354
Query: 366 REKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLEEYKR 425
+ K+ RY +MDSM+ +ELD +P L+N SR+ RIARG+G EV E+L+ YK
Sbjct: 355 VYDVTSTKMARYRILMDSMSPKELD--DPSLINSSRMQRIARGAGGTPEEVRELLKYYKM 412
Query: 426 LAKIWSKMKG 435
+ K ++G
Sbjct: 413 MHKTLKGLRG 422
>gi|296241780|ref|YP_003649267.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Thermosphaera aggregans DSM 11486]
gi|296094364|gb|ADG90315.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Thermosphaera aggregans DSM 11486]
Length = 448
Score = 314 bits (804), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 161/404 (39%), Positives = 260/404 (64%), Gaps = 14/404 (3%)
Query: 25 EKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELC 84
E+ +NE + ++ + L+++DV L E+ IK+ + G +++ ++ EL
Sbjct: 22 EEAVNEFIKDLQKELVKSDVNLNLAFEITKKIKERALTQEPPVGVSRKEWFLSIVYEELV 81
Query: 85 KMLD-PGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAG 143
K+L KPS P + KP +IM VGLQGSGKTTT K AY+++ +G+K LV ADTFR
Sbjct: 82 KLLGGDSKPSIKPAR-KPWIIMLVGLQGSGKTTTAAKLAYFYKLEGYKVGLVAADTFRPA 140
Query: 144 AFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFE 203
A+DQL+Q + +P YG + D V IA GV+ F ++ +++I+DT+GRH +E L E
Sbjct: 141 AYDQLRQLGEQIGVPVYGDPSIEDAVEIASRGVKYFVEKGFEVVIIDTAGRHHKEEDLLE 200
Query: 204 EMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSA 263
EMR +S ++V PD +I V+D SIGQ A++ A+ F ++ +G++IVTK+DG AKGGGALSA
Sbjct: 201 EMRLIS-SSVKPDEIILVIDGSIGQQAYNIAKKFHETTPIGSIIVTKLDGTAKGGGALSA 259
Query: 264 VAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQK 323
VAAT +P+ F+G GE +++FEVF V R+LG GD G ++++ + Q EL +K
Sbjct: 260 VAATGAPIKFVGLGEKVEDFEVFKPSKLVGRVLGYGDIEGLVERVKRI-----QLELTEK 314
Query: 324 ----LSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMT 379
+ EG +R++Y+Q ++ KMGP+ ++ M+PG ++ + K+ + K+ +++
Sbjct: 315 DVEDIMEGRLNMRLVYKQLVSLRKMGPLRKILQMIPGLGVKIPFEVDPKDLELKLSKWLA 374
Query: 380 MMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLEEY 423
+++SMT +ELD NP++++ SR+ RIARG+G V E+L++Y
Sbjct: 375 VINSMTYDELD--NPEIIDKSRLKRIARGAGVDAEYVRELLKQY 416
>gi|448712956|ref|ZP_21701886.1| signal recognition particle protein Srp54 [Halobiforma
nitratireducens JCM 10879]
gi|445789882|gb|EMA40556.1| signal recognition particle protein Srp54 [Halobiforma
nitratireducens JCM 10879]
Length = 463
Score = 313 bits (802), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 173/445 (38%), Positives = 267/445 (60%), Gaps = 21/445 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ ++ ++ + I E+ ++E + EI R+L+ ADV LV+E+ +I++
Sbjct: 1 MVLDDLGSSLRGSLDKLRGKSRISEEDVDEIVKEIQRSLISADVDISLVQELSDSIEERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG R + + ++ EL ++ G + P + + I+ GLQGSGKTT+ K
Sbjct: 61 LEEEPPAGTPARDFVLRIVYEELVDLI--GDSTELPLEEQ--TILLAGLQGSGKTTSAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KG +PA+V DTFR GA+DQ K+ A +A++ FYG+ DPV IA G+E +
Sbjct: 117 MAWWFSTKGLRPAVVQTDTFRPGAYDQAKEMAERAEVDFYGNPDNDDPVEIARNGLE--E 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
D+ IVDT+GRH E L +E+ Q+ E V PD + V+D++IGQ A DQAQ F +S
Sbjct: 175 TSEADVHIVDTAGRHALEDDLIDEIEQI-EGVVEPDTSLLVLDAAIGQGAKDQAQQFDES 233
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
+ + V++TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 234 IGIDGVVITKLDGTAKGGGALTAVDQTDSSIAFLGTGEEVQDVERFEPDGFISRLLGMGD 293
Query: 301 WSGFMDKIH------EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSML 354
S +++ E+ D PE + +G FTL M +Q + + MGP+ QV M+
Sbjct: 294 LSQLAERVERAMEQTEIEEEDWDPE---DMLQGQFTLNDMQKQMEAMNNMGPLDQVMDMI 350
Query: 355 PGFSS---ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGR 411
PGF S + +P +Q +++R+ +MDSMT E + PK + S+I RIARGSG
Sbjct: 351 PGFGSGIKDQLPDDAMDVTQDRMRRFQVIMDSMT--EAEKEYPKAIGQSQIERIARGSGT 408
Query: 412 QVREVMEMLEEYKRLAKIWSKMKGL 436
+V ++LE+YK + K + +G+
Sbjct: 409 SEEDVRQLLEQYKMMEKTIKQFQGM 433
>gi|289596592|ref|YP_003483288.1| GTP-binding signal recognition particle SRP54 G- domain protein
[Aciduliprofundum boonei T469]
gi|289534379|gb|ADD08726.1| GTP-binding signal recognition particle SRP54 G- domain protein
[Aciduliprofundum boonei T469]
Length = 449
Score = 313 bits (802), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 176/435 (40%), Positives = 264/435 (60%), Gaps = 10/435 (2%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L LG S+ I+++S A +DE ++ E + +I RALL+ADV+ L ++ N+++
Sbjct: 1 MLDSLGESLRNTIRKISKAGYVDESLIKEVVRDIQRALLRADVEVHLALKLSKNVERRAL 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
+ +G + R + + I+ EL +L K KP +M VGL G GKTTT K
Sbjct: 61 EEKPPSGMSHRDFLIKIIYEELVAILGKEKEVAL----KPQKLMLVGLYGQGKTTTAGKL 116
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKK 181
A Y KKG AL+ D R A++QLKQ + +P +G E D +IA E V+ K
Sbjct: 117 ARYFHKKGLSVALIACDVHRPAAYEQLKQIGEQLNVPVFGIPGEKDARKIAREAVKKMK- 175
Query: 182 ENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSV 241
+ + I DTSGRH E L EE++ + E + PD + V+D++IGQ A QA+AF +V
Sbjct: 176 -DYQVQIFDTSGRHALEDDLIEEIKDLKE-IIQPDEIFLVLDATIGQQAGKQAKAFHDAV 233
Query: 242 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 301
V VI+TKMDG AKGGGALSAVAAT +PV+FIGTGEH+++ E F+ F+SRLLGMGD
Sbjct: 234 GVTGVIITKMDGSAKGGGALSAVAATGAPVVFIGTGEHLEDLEHFNPTRFISRLLGMGDL 293
Query: 302 SGFMD-KIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
++ + ++ ++++++ G F L+ MYE ++ + K G + ++ LP F
Sbjct: 294 ETLLETAKELELKEEEAEKVMERMMSGKFNLKDMYEIWEQMAKPGLLQKILYSLPFFKMG 353
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEML 420
+ KG +ES+ K+++Y +MDSMT EEL+ NP+++ SRI RIARGSGR +EV +L
Sbjct: 354 DIDKGMVEESEEKLRKYRIIMDSMTYEELE--NPEIIKSSRIKRIARGSGRSEQEVRSLL 411
Query: 421 EEYKRLAKIWSKMKG 435
+EY R+ K +M+G
Sbjct: 412 KEYNRMKKTMKQMRG 426
>gi|126460331|ref|YP_001056609.1| signal recognition particle subunit FFH/SRP54 (srp54) [Pyrobaculum
calidifontis JCM 11548]
gi|171855105|sp|A3MWX6.1|SRP54_PYRCJ RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|126250052|gb|ABO09143.1| signal recognition particle subunit FFH/SRP54 (srp54) [Pyrobaculum
calidifontis JCM 11548]
Length = 431
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 176/430 (40%), Positives = 269/430 (62%), Gaps = 11/430 (2%)
Query: 5 QLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDD 64
+L S+ I+++ IDE VL E EI R+LL+ADV +LV+ + K + +
Sbjct: 2 KLSEVFSKLIEKIRGVDYIDEAVLQELSREIQRSLLKADVPLELVKAFTDSAVKRIREEK 61
Query: 65 LAAGHNKRRIIQQAIFNELCKMLDPGKPS-FTPKKGKPSVIMFVGLQGSGKTTTCTKYAY 123
AG R + ++ EL K+L +P+ F P K KP V++ +G++GSGKTTT K A
Sbjct: 62 PPAGIPPREYLVYVLYEELVKLLGGEQPAEFKPTK-KPYVVLLLGVEGSGKTTTAAKLAK 120
Query: 124 YHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKEN 183
Y K+G+K LV DT R AFDQLKQ A K +PFYG + V IAV GV+ FK N
Sbjct: 121 YLAKRGYKVGLVETDTIRPAAFDQLKQLAEKIGVPFYGERDGKNAVEIAVRGVQNFK--N 178
Query: 184 CDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSV 243
D++I+DT+GRH+ E L +E++ + +A V PD V V+D+++G+ A QA+AF + + +
Sbjct: 179 MDVVIIDTAGRHRNEEELLKEVKAIYDA-VKPDEVFLVIDATVGKLAAAQAEAFMKYLPI 237
Query: 244 GAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSG 303
+VI+TKMD A+GGGAL+AVA T + V FIG GE +DEFE+F+ + FV+R+LGMGD
Sbjct: 238 HSVIITKMDSTARGGGALAAVAKTGARVKFIGVGEDVDEFELFNPRKFVARVLGMGDLDA 297
Query: 304 FMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMP 363
++KI V D+ +L++L G L +Q ++LK+GP+ +VF +LP + +
Sbjct: 298 LVEKIKAVFEEDK---VLEELESGRLDLLTFKKQIDSLLKLGPLSKVFQLLPSNFAIKVS 354
Query: 364 KGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLEEY 423
+ + + SQ ++++ ++ SMT EEL +P+++N SRI RIA G+G ++V EML +
Sbjct: 355 EEQIELSQKNLRKWKAILSSMTMEEL--KHPEVLNASRIRRIAMGAGVTPKDVKEMLTVF 412
Query: 424 KRLAKIWSKM 433
+ + K+ SKM
Sbjct: 413 ENMKKM-SKM 421
>gi|12230633|sp|P70722.2|SRP54_ACIAM RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|4165432|emb|CAA69991.1| fifty-four homologue of SRP54 [Acidianus ambivalens]
Length = 451
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 176/426 (41%), Positives = 269/426 (63%), Gaps = 10/426 (2%)
Query: 4 AQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLD 63
++L ++ A+++ + +K + + + E+ ++L+ ADV KLV + IK+ + +
Sbjct: 1 SKLLDNLRDAVRKFLTGSSSYDKAVEDFIKELQKSLISADVNVKLVFSLTNKIKERLKNE 60
Query: 64 DLAAGHNKRRIIQQAIFNELCKMLDPGK-PSFTPKKGKPSVIMFVGLQGSGKTTTCTKYA 122
+R + +++EL + K P P K P VIM VG+QG+GKTTT K A
Sbjct: 61 KPPTYIERREWFIKIVYDELSNLFGGDKEPKVIPDK-IPYVIMLVGVQGTGKTTTAGKLA 119
Query: 123 YYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKE 182
Y+++KKG+K LV AD +R A +QL+Q + +P YG E D V IA GVE F E
Sbjct: 120 YFYKKKGFKVGLVGADVYRPAALEQLQQLGQQIGVPVYGEPGEKDAVGIAKRGVEKFLSE 179
Query: 183 NCDLIIVDTSGRHK--QEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
++IIVDT+GRH +EAAL EEM+ + EA + PD V V+D+SIGQ A+D A F Q+
Sbjct: 180 KMEIIIVDTAGRHGYGEEAALLEEMKNIYEA-IKPDEVTLVIDASIGQKAYDLASKFNQA 238
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
+G +I+TKMDG AKGGGALSAVAAT + + FIGTGE +DE EVF+ + FV+R+LGMGD
Sbjct: 239 SKIGTIIITKMDGTAKGGGALSAVAATGATIKFIGTGEKIDELEVFNPRRFVARILGMGD 298
Query: 301 WSGFMDKIHEVVPMDQQPELLQKL--SEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFS 358
++KI EV D+ + ++++ +G TLR +Y Q + KMGP+ ++F +LPG
Sbjct: 299 IETILEKIKEVENYDKMQKKMEEVISGKGKLTLRDVYNQLIALRKMGPLSKLFQLLPGIG 358
Query: 359 S-ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVM 417
+P+ + K + K+++++ +M+SMT EELD NP +++ SR+ RIA GSG ++ +V
Sbjct: 359 MLGQIPEDQLKVGEEKMRKWLAIMNSMTYEELD--NPSIIDKSRMRRIALGSGTEIEDVK 416
Query: 418 EMLEEY 423
E++E Y
Sbjct: 417 ELIEHY 422
>gi|292654301|ref|YP_003534198.1| signal recognition particle protein [Haloferax volcanii DS2]
gi|433434645|ref|ZP_20408024.1| signal recognition particle protein Srp54 [Haloferax sp. BAB2207]
gi|448293845|ref|ZP_21483948.1| signal recognition particle protein Srp54 [Haloferax volcanii DS2]
gi|448573620|ref|ZP_21641103.1| signal recognition particle protein Srp54 [Haloferax lucentense DSM
14919]
gi|448597768|ref|ZP_21654693.1| signal recognition particle protein Srp54 [Haloferax alexandrinus
JCM 10717]
gi|28380161|sp|Q977V2.1|SRP54_HALVD RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54; AltName: Full=Hv54h
gi|15277690|gb|AAK93963.1|AF395887_1 signal recognition particle 54 kDa subunit-like protein [Haloferax
volcanii]
gi|291371443|gb|ADE03670.1| signal recognition particle 54K protein [Haloferax volcanii DS2]
gi|432192665|gb|ELK49503.1| signal recognition particle protein Srp54 [Haloferax sp. BAB2207]
gi|445569766|gb|ELY24337.1| signal recognition particle protein Srp54 [Haloferax volcanii DS2]
gi|445718526|gb|ELZ70216.1| signal recognition particle protein Srp54 [Haloferax lucentense DSM
14919]
gi|445739229|gb|ELZ90738.1| signal recognition particle protein Srp54 [Haloferax alexandrinus
JCM 10717]
Length = 465
Score = 312 bits (800), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 171/433 (39%), Positives = 264/433 (60%), Gaps = 21/433 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ ++ ++ + +DE + E + EI R+LL ADV LV ++ +IK
Sbjct: 1 MVLDNLGSSLRGSLDKLRGKSRLDEDDVQEIVKEIQRSLLSADVDVSLVMDLSDSIKTRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ G + R + + ++ EL ++ G+ + P + + IM GLQGSGKTTT K
Sbjct: 61 LEEEPPGGTSARDHVLKIVYEELVDLI--GESTEIPLESQ--TIMLAGLQGSGKTTTSAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KKG +PA++ DTFR GA+DQ KQ +A++ FYG DPV+IA EG+E
Sbjct: 117 MAWWFSKKGLRPAVIQTDTFRPGAYDQAKQMCERAEVDFYGDPDCDDPVQIAREGLEA-- 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
E+ D+ IVDT+GRH E L +E+ ++ E V PDL + V+D++IGQ A +QAQ F +S
Sbjct: 175 TEDADVHIVDTAGRHALEDDLIDEIEEI-EGVVQPDLNLLVLDAAIGQGAKEQAQQFDES 233
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
+ +G V++TK+DG AKGGGAL+AV T S + F+G GE + + E F+ F+SRLLGMGD
Sbjct: 234 IGIGGVVITKLDGTAKGGGALTAVNETDSSIAFLGMGETVQDIERFEPNGFISRLLGMGD 293
Query: 301 WSGFMDKIHEVVP------MDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSML 354
+++ + D PE + K GNFTL+ M +Q + + KMGP+ QV M+
Sbjct: 294 LKQLSERVERAMSETQAEDEDWDPEEMMK---GNFTLKDMQKQMEAMDKMGPLDQVLDMI 350
Query: 355 PGFSS---ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGR 411
PGF + +P ++ +++ + +MDSMT EEL+ NP+ + SR+ RIA+GSG+
Sbjct: 351 PGFGGGIKDQLPDDAMDVTKDRMRSFEVIMDSMTEEELE--NPRKVGASRVRRIAQGSGQ 408
Query: 412 QVREVMEMLEEYK 424
+ E+LE+++
Sbjct: 409 DEETIQELLEQHR 421
>gi|448607296|ref|ZP_21659441.1| signal recognition particle protein Srp54 [Haloferax sulfurifontis
ATCC BAA-897]
gi|445738308|gb|ELZ89833.1| signal recognition particle protein Srp54 [Haloferax sulfurifontis
ATCC BAA-897]
Length = 464
Score = 311 bits (798), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 171/433 (39%), Positives = 263/433 (60%), Gaps = 21/433 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ ++ ++ + +DE + E + EI R+LL ADV LV ++ +IK
Sbjct: 1 MVLDNLGSSLRGSLDKLRGKSRLDEDDVQEIVKEIQRSLLSADVDVSLVMDLSDSIKTRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ G N R + + ++ EL ++ G+ + P + + IM GLQGSGKTTT K
Sbjct: 61 LEEEPPGGTNARDHVLKIVYEELVDLI--GESTEIPLESQ--TIMLAGLQGSGKTTTSAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KKG +PA++ DTFR GA+DQ KQ +A++ FYG DPV+IA EG+E
Sbjct: 117 MAWWFSKKGLRPAVIQTDTFRPGAYDQAKQMCERAEVDFYGDPDCDDPVQIAREGLEA-- 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
E+ D+ IVDT+GRH E L +E+ ++ E V PDL + V+D++IGQ A +QAQ F +S
Sbjct: 175 TEDADVHIVDTAGRHALEDDLIDEIEEI-EGVVQPDLNLLVLDAAIGQGAKEQAQQFDES 233
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
+ +G V++TK+DG AKGGGAL+AV T S + F+G GE + + E F+ F+SRLLGMGD
Sbjct: 234 IGIGGVVITKLDGTAKGGGALTAVNETDSSIAFLGMGETVQDIERFEPNGFISRLLGMGD 293
Query: 301 WSGFMDKIHEVVP------MDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSML 354
+++ + D PE + K GNFTL+ M +Q + + KMGP+ QV M+
Sbjct: 294 LKQLSERVERAMSETQAEDEDWDPEEMMK---GNFTLKDMQKQMEAMDKMGPLDQVLDMI 350
Query: 355 PGFSS---ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGR 411
PGF + +P ++ +++ + +MDSMT EL+ NP+ + SR+ RIA+GSG+
Sbjct: 351 PGFGGGIKDQLPDDAMDVTKDRMRAFEVIMDSMTEAELE--NPRKVGASRVKRIAQGSGQ 408
Query: 412 QVREVMEMLEEYK 424
+ E+LE+++
Sbjct: 409 DEETIQELLEQHR 421
>gi|284162145|ref|YP_003400768.1| GTP-binding signal recognition particle SRP54 G-domain-containing
protein [Archaeoglobus profundus DSM 5631]
gi|284012142|gb|ADB58095.1| GTP-binding signal recognition particle SRP54 G-domain protein
[Archaeoglobus profundus DSM 5631]
Length = 435
Score = 311 bits (798), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 175/418 (41%), Positives = 261/418 (62%), Gaps = 15/418 (3%)
Query: 9 SISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAG 68
++ A+++++ + +D+ ++ E + +I RAL++ADV + V+E+ IKK +++ G
Sbjct: 5 ALKEAVRKITRSATVDKALVEEIVKDIQRALIKADVNVRHVKEISDAIKKRALSEEVLEG 64
Query: 69 HNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKK 128
N R I + ++ EL K + G KK K IM VGLQGSGKTTT K A Y + K
Sbjct: 65 LNPREHIIKIVYEELLKGIGEG-LEIPLKKSK---IMLVGLQGSGKTTTTAKLAKYFKDK 120
Query: 129 GWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLII 188
G + A+VCADT+R A+DQLKQ A I FYG D V+I ++ K + D+II
Sbjct: 121 GLRTAVVCADTWRPAAYDQLKQLAENYGIAFYGERESKDAVKIVENALKKLK--DYDMII 178
Query: 189 VDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIV 248
+DT+GRH E L +EM ++++ NPD + V+D++IGQ A QA+AF +++ + +I+
Sbjct: 179 IDTAGRHALEKELIDEMIEIAKVA-NPDYKLLVLDAAIGQLASKQAKAFHEAIGIDGIII 237
Query: 249 TKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKI 308
TK DG AKGGGALSA P+ FIGTGE +++FE FD FVSRLLGMGD ++K+
Sbjct: 238 TKFDGTAKGGGALSAAREIGIPIAFIGTGEKVEDFERFDPAGFVSRLLGMGDIKALIEKV 297
Query: 309 HEVVPMDQ-QPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLP-GFSSELMPKGR 366
V ++ PE K +G FTL+ +Y+Q + + KMGPI ++F +LP GF ++
Sbjct: 298 ERVAKQEELDPE---KFLKGTFTLKDIYKQIEAMQKMGPIKKIFELLPFGFGLKVDDNIM 354
Query: 367 EKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLEEYK 424
E +Q K+K++ +MDSMT EEL NPK+++ SRI RIA GSG ++V E+L Y+
Sbjct: 355 EM-TQEKMKKFKVIMDSMTEEEL--LNPKIIDSSRIRRIAIGSGTTPQDVKELLRYYR 409
>gi|327401116|ref|YP_004341955.1| Signal recognition 54 kDa protein [Archaeoglobus veneficus SNP6]
gi|327316624|gb|AEA47240.1| Signal recognition 54 kDa protein [Archaeoglobus veneficus SNP6]
Length = 436
Score = 311 bits (797), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 179/417 (42%), Positives = 260/417 (62%), Gaps = 15/417 (3%)
Query: 9 SISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAG 68
S+ +++++ +T +D+ ++ E + +I RALL+ADV + V+E+ IKK +D+
Sbjct: 5 SLKDIVKKIARSTTVDKALVEEVVRDIQRALLKADVNVRQVKEISDAIKKRALSEDVLPT 64
Query: 69 HNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKK 128
N R I + ++ EL + + G KK K IM VGLQGSGKTTT K A Y + K
Sbjct: 65 FNVREHIIRIVYEELMRGIGEG-LEIPLKKAK---IMLVGLQGSGKTTTAAKLAKYFKDK 120
Query: 129 GWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLII 188
G K ++ ADT+R A++QLKQ A I FYG D V IA G++ K + D+II
Sbjct: 121 GMKTGVIAADTWRPAAYEQLKQLAESYGIGFYGEKENKDAVEIARNGLKALK--DYDMII 178
Query: 189 VDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIV 248
+DT+GRH E L +EM ++++AT PD + V+D++IGQ A QA+AF ++ + +I+
Sbjct: 179 IDTAGRHALEEELIDEMIEIAKAT-QPDYKLLVLDAAIGQLASRQAKAFHDAIGINGIII 237
Query: 249 TKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKI 308
TK DG AKGGGALSA P+ FIGTGE +++FE FD FVSRLLGMGD ++K+
Sbjct: 238 TKFDGTAKGGGALSAAREIGIPIAFIGTGEKVEDFERFDPAGFVSRLLGMGDIKALLEKV 297
Query: 309 HEVVPMDQ-QPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLP-GFSSELMPKGR 366
VV ++ PE K G FTL+ +Y+Q + + KMGPI ++F +LP GFS ++
Sbjct: 298 ERVVSEEELDPEAFLK---GTFTLKDVYKQIEAMNKMGPISKIFELLPFGFSMKVDDSMM 354
Query: 367 EKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLEEY 423
E +Q K+K++ +MDSMT EEL NPK+++ SRI RIA GSG +EV E+L+ Y
Sbjct: 355 EM-TQEKMKKFRVIMDSMTEEEL--LNPKIIDSSRIRRIAIGSGTSPQEVKELLKYY 408
>gi|374326743|ref|YP_005084943.1| signal recognition particle [Pyrobaculum sp. 1860]
gi|356642012|gb|AET32691.1| signal recognition particle (srp54 family), putative [Pyrobaculum
sp. 1860]
Length = 433
Score = 311 bits (797), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 177/434 (40%), Positives = 267/434 (61%), Gaps = 13/434 (2%)
Query: 11 SRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHN 70
S+ I+++ IDE L E EI R LL+ADV LV+ N K + + AG
Sbjct: 9 SKLIEKIRGVEYIDEATLQELSREIQRTLLKADVPLDLVKSFTENAVKRIKEEKPPAGIP 68
Query: 71 KRRIIQQAIFNELCKMLDPGK-PSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
R + +++EL K+L + P F P K +P V++ +G++GSGKTTT K A Y K+G
Sbjct: 69 PREYLIYVLYDELVKLLGGEQTPEFKPVK-RPYVVLLLGVEGSGKTTTAAKLAKYLAKRG 127
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
+K LV DT R AFDQL+Q A + +PFYG E D V IA GV+ F+ N D++IV
Sbjct: 128 YKVGLVETDTIRPAAFDQLRQLAERIGVPFYGERDEKDAVEIAKRGVQNFR--NMDVVIV 185
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DT+GRH+ E AL +E++ + +A V PD V+ V+D+++G+ A QA+AF + + + +VI+T
Sbjct: 186 DTAGRHRNEEALLQEVKAIYDA-VGPDEVMLVIDATVGKLAAAQAEAFMKYLPIHSVIIT 244
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
KMD A+GGGAL+AVA T + V FIG GE +DEFE F + FV+R+LGMGD ++KI
Sbjct: 245 KMDSTARGGGALAAVAKTGARVKFIGVGEDVDEFEPFHPRKFVARVLGMGDLDALVEKIK 304
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
V ++ L+++ G L +Q ++LK+GP+ +VF +LPG + + + + +
Sbjct: 305 AVFEEEEV---LEEIESGKLDLLTFKKQIDSLLKLGPLSKVFQLLPGGIAAKISEEQIEL 361
Query: 370 SQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLEEYKRLAKI 429
SQ +K++ ++ SMT EEL NP ++N SRI RIA G+G ++V EML Y+ L K+
Sbjct: 362 SQKNLKKWRAILSSMTREEL--KNPDVLNASRIRRIALGAGVTPKDVKEMLTVYENLRKM 419
Query: 430 WSKMK---GLKIPK 440
+K L++P+
Sbjct: 420 SKTLKRQLRLRMPR 433
>gi|18314019|ref|NP_560686.1| signal recognition particle protein [Pyrobaculum aerophilum str.
IM2]
gi|28380154|sp|Q8ZT95.1|SRP54_PYRAE RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|18161596|gb|AAL64868.1| signal recognition particle (srp54 family), putative [Pyrobaculum
aerophilum str. IM2]
Length = 433
Score = 310 bits (795), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 175/424 (41%), Positives = 262/424 (61%), Gaps = 10/424 (2%)
Query: 12 RAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNK 71
+ ++++ IDE L E EI R LL+ADV LV+ N K + + AG
Sbjct: 10 KLLEKIRGVDYIDEATLQELSREIQRTLLKADVPLDLVKSFTENAVKRIKEEKPPAGIPP 69
Query: 72 RRIIQQAIFNELCKMLDPGKPS-FTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGW 130
R + ++ EL K+L +P+ F P K KP +++ +G++GSGKTTT K A Y K+G+
Sbjct: 70 REYLIYVLYEELVKLLGGEQPAEFKPTK-KPYIVLLLGVEGSGKTTTAAKLAKYLAKRGY 128
Query: 131 KPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVD 190
K LV DT R AFDQL+Q A K +PFYG D V IA GV+ FK N D+IIVD
Sbjct: 129 KVGLVETDTIRPAAFDQLRQLAEKIGVPFYGERDGKDAVEIAKRGVQNFK--NMDVIIVD 186
Query: 191 TSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 250
T+GRH+ E AL +E+R + +A V+PD V+ V+D+++G+ A QA+AF + + + +VI+TK
Sbjct: 187 TAGRHRNEEALLKEVRAIYDA-VSPDEVVLVIDATVGKMAAAQAEAFMKYLPIHSVIITK 245
Query: 251 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 310
MD A+GGGAL+AVA T + V FIG GE +DEFE F + FV+R+LGMGD ++KI
Sbjct: 246 MDSTARGGGALAAVAKTGAKVKFIGVGEDVDEFEQFSPRKFVARVLGMGDLDTLLEKIKA 305
Query: 311 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 370
V ++ L+++ G L +Q ++LK+GP+ +VF +LPG + + + + + S
Sbjct: 306 VFEEEEV---LEEIESGRLDLLTFKKQIDSLLKLGPLSKVFQLLPGNLAAKISEEQIELS 362
Query: 371 QAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLEEYKRLAKIW 430
Q +K++ ++ SMT EEL NP+++N SRI RIA G+G ++V EML Y+ L K+
Sbjct: 363 QRNLKKWRAILSSMTLEEL--KNPEILNASRIRRIALGAGVAPKDVKEMLTVYENLRKMS 420
Query: 431 SKMK 434
++
Sbjct: 421 KTLR 424
>gi|146304520|ref|YP_001191836.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Metallosphaera sedula DSM 5348]
gi|172046932|sp|A4YHL0.1|SRP54_METS5 RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|145702770|gb|ABP95912.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Metallosphaera sedula DSM 5348]
Length = 446
Score = 310 bits (795), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 171/434 (39%), Positives = 267/434 (61%), Gaps = 16/434 (3%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
I A+++ E + E + +I +AL+ +DVQ KLV + IK+ + + +
Sbjct: 5 IRDAVRKFLGGNTSYEVAVEEFIKDIQKALISSDVQVKLVFSLTNKIKERLKKETPPSNL 64
Query: 70 NKRRIIQQAIFNELCKMLDPGK-PSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKK 128
+R + +++EL + K P PK P VIM VG+QG+GKTTT K AY+++K+
Sbjct: 65 ERREWFIKIVYDELSALFGGDKEPEVNPK-SIPWVIMLVGVQGTGKTTTAGKLAYFYKKR 123
Query: 129 GWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLII 188
G+K ALV AD +R A +QL+Q + +P YG D V IA GVE F E +L+I
Sbjct: 124 GYKVALVGADVYRPAALEQLQQIGKQINVPVYGEPGSQDAVGIAKRGVEKFLSERYELVI 183
Query: 189 VDTSGRH--KQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAV 246
VDT+GRH +E L EEM+ + E + P+ VI V+D+S+GQ A+D A+ F ++ +VG++
Sbjct: 184 VDTAGRHGYGEEVKLLEEMKDIYE-KIKPNEVILVIDASLGQKAYDLAKRFHEASNVGSI 242
Query: 247 IVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMD 306
I+TKMDG AKGGGALSAVAAT +P+ FIG GE +DE EVF+ + FV+R+LGMGD ++
Sbjct: 243 IITKMDGTAKGGGALSAVAATGAPIKFIGVGEKIDELEVFNPRRFVARILGMGDLEAIIE 302
Query: 307 KIHEVVPMDQQPELLQKLSE-----GNFTLRIMYEQFQNILKMGPIGQVFSMLPGFS-SE 360
K+ M+ + +K+ E TLR MY+Q + KMGP+ ++ ++PG +
Sbjct: 303 KMK---AMEDYEGIQKKMGEVMTGKSKLTLRDMYKQIVAVRKMGPLSKILQLIPGMNMMG 359
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEML 420
+P+ + K + K++R++++M+SMT +ELD NP +++ R+ RIA GSG +V EV E++
Sbjct: 360 DIPEDQVKVGEQKMQRWLSIMNSMTYQELD--NPSIIDKQRMRRIAMGSGTEVEEVRELI 417
Query: 421 EEYKRLAKIWSKMK 434
E + + + +K
Sbjct: 418 EHFNTVQRTLKMLK 431
>gi|313124886|ref|YP_004035150.1| signal recognition particle subunit ffh/srp54 (srp54)
[Halogeometricum borinquense DSM 11551]
gi|448287294|ref|ZP_21478507.1| signal recognition particle protein Srp54 [Halogeometricum
borinquense DSM 11551]
gi|312291251|gb|ADQ65711.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Halogeometricum borinquense DSM 11551]
gi|445572502|gb|ELY27040.1| signal recognition particle protein Srp54 [Halogeometricum
borinquense DSM 11551]
Length = 464
Score = 310 bits (795), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 168/442 (38%), Positives = 266/442 (60%), Gaps = 15/442 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ ++ ++ + +DE + E + EI R+LL ADV LV ++ ++IK+
Sbjct: 1 MVLDNLGSSLRGSLDKLQGKSRLDEDDVEEIVREIQRSLLSADVDVNLVMDLSSSIKERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ G + R + + ++ EL ++ G+ + P + P I+ GLQGSGKTTT K
Sbjct: 61 LNEEPPGGTSARDHVLKIVYEELVGLI--GESTDIPLE--PQTILLAGLQGSGKTTTAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KG + A++ DTFR GA+DQ KQ +A++ FYG E DPV+IA +G+E
Sbjct: 117 MAWWFSTKGLRAAVIQTDTFRPGAYDQAKQMCERAEVEFYGDPDEEDPVKIARDGLEA-- 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
E+ D+ IVDT+GRH E AL +E+ + A VNPD + V+D++IGQ A DQA+ F S
Sbjct: 175 TEDADIHIVDTAGRHALEDALIDEIEDIDSA-VNPDRSLLVLDAAIGQGAKDQARQFDDS 233
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
+ + V +TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 234 IGIDGVAITKLDGTAKGGGALTAVNETDSSIGFLGTGETVQDIERFEPNGFISRLLGMGD 293
Query: 301 WSGFMDKIHEVVPMDQ---QPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGF 357
+++ + Q + + +G+FTL+ M +Q + + +MGP+ QV M+PG
Sbjct: 294 LKQLSERVERAMAETQEEEDDWDPEDIMKGSFTLKDMQKQMEAMNRMGPLDQVLDMIPGL 353
Query: 358 SS---ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVR 414
+ +P +Q +++ + +MDSMT EL+ NP+ + SR+ RIARGSG+
Sbjct: 354 GGGFKDQLPDDAMDVTQDRMRSFDVIMDSMTEAELE--NPRTIGASRVRRIARGSGKDEE 411
Query: 415 EVMEMLEEYKRLAKIWSKMKGL 436
V E+LE++K + + + +G+
Sbjct: 412 TVQELLEQHKMMERTIKQFQGM 433
>gi|448544114|ref|ZP_21625427.1| signal recognition particle protein Srp54 [Haloferax sp. ATCC
BAA-646]
gi|448551126|ref|ZP_21629268.1| signal recognition particle protein Srp54 [Haloferax sp. ATCC
BAA-645]
gi|448558381|ref|ZP_21633055.1| signal recognition particle protein Srp54 [Haloferax sp. ATCC
BAA-644]
gi|445705618|gb|ELZ57511.1| signal recognition particle protein Srp54 [Haloferax sp. ATCC
BAA-646]
gi|445710682|gb|ELZ62480.1| signal recognition particle protein Srp54 [Haloferax sp. ATCC
BAA-645]
gi|445713269|gb|ELZ65048.1| signal recognition particle protein Srp54 [Haloferax sp. ATCC
BAA-644]
Length = 465
Score = 310 bits (793), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 170/433 (39%), Positives = 263/433 (60%), Gaps = 21/433 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ ++ ++ + +DE + E + EI R+LL ADV LV ++ +IK
Sbjct: 1 MVLDNLGSSLRGSLDKLRGKSRLDEDDVQEIVKEIQRSLLSADVDVSLVMDLSDSIKTRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ G + R + + ++ EL ++ G+ + P + + IM GLQGSGKTTT K
Sbjct: 61 LEEEPPGGTSARDHVLKIVYEELVDLI--GESTEIPLESQ--TIMLAGLQGSGKTTTSAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KKG +PA++ DTFR GA+DQ KQ +A++ FYG DPV+IA EG+E
Sbjct: 117 MAWWFSKKGLRPAVIQTDTFRPGAYDQAKQMCERAEVDFYGDPDCDDPVQIAREGLEA-- 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
E+ D+ IVDT+GRH E L +E+ ++ E V PDL + V+D++IGQ A +QAQ F +S
Sbjct: 175 TEDADVHIVDTAGRHALEDDLIDEIEEI-EGVVQPDLNLLVLDAAIGQGAKEQAQQFDES 233
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
+ +G V++TK+DG AKGGGAL+AV T S + F+G GE + + E F+ F+SRLLGMGD
Sbjct: 234 IGIGGVVITKLDGTAKGGGALTAVNETDSSIAFLGMGETVQDIERFEPNGFISRLLGMGD 293
Query: 301 WSGFMDKIHEVVP------MDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSML 354
+++ + D PE + K GNFTL+ M +Q + + KMGP+ QV M+
Sbjct: 294 LKQLSERVERAMSETQAEDEDWDPEEMMK---GNFTLKDMQKQMEAMDKMGPLDQVLDMI 350
Query: 355 PGFSS---ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGR 411
PGF + +P ++ +++ + +MDSMT EL+ NP+ + SR+ RIA+GSG+
Sbjct: 351 PGFGGGIKDQLPDDAMDVTKDRMRAFEVIMDSMTEAELE--NPRKVGASRVRRIAQGSGQ 408
Query: 412 QVREVMEMLEEYK 424
+ E+LE+++
Sbjct: 409 DEETIQELLEQHR 421
>gi|395646259|ref|ZP_10434119.1| Signal recognition 54 kDa protein [Methanofollis liminatans DSM
4140]
gi|395442999|gb|EJG07756.1| Signal recognition 54 kDa protein [Methanofollis liminatans DSM
4140]
Length = 438
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 168/437 (38%), Positives = 265/437 (60%), Gaps = 14/437 (3%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L L S+ A+++++ T++D + E + + RALLQADV KLV ++ +IK+
Sbjct: 1 MLDSLSSSLKDALKKIAGKTVVDRAAVEELVRSLQRALLQADVNVKLVMQLSQSIKRRAL 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLD-PGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ G N R + + ++ EL ++ GK + + I+ GLQGSGKTTT K
Sbjct: 61 EEEPPKGMNLREHVLRIVYQELVALMGGAGKVDLSQQ-----TILMAGLQGSGKTTTTAK 115
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A Y Q+KG K ++CADTFR GA+ QL K +P +G E D + I EG++ F
Sbjct: 116 LARYFQRKGLKVGVICADTFRPGAYKQLSTLCAKVNVPIFGDPAEKDALLIVREGIKRFA 175
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
+ +++I+DT GRH E L +E+ ++E P+ V+D+++GQ A +QA+ F ++
Sbjct: 176 E--TEVVIIDTQGRHALEDDLIQEIIDINE-IAKPEHRWLVIDAALGQQAAEQARRFNEA 232
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
+ + V++TKMDG AKGGGALSAV+ TKS ++FIG GE +D+ E FD F+SRLLGMGD
Sbjct: 233 IEIDGVLITKMDGTAKGGGALSAVSETKSGIVFIGAGETIDDLERFDPDGFISRLLGMGD 292
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
++ EV+ D++ + + + G FTLR MY+Q + + KMGP+ QV SMLP
Sbjct: 293 LKALAERAEEVMA-DEEMD-VNAMLRGKFTLRDMYKQLETVNKMGPLKQVMSMLP-LGGM 349
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEML 420
+P + K++RY +MDSMT+ ELD +P++++ SR+ RI+RG+G +V E+L
Sbjct: 350 QIPDDAYDVTSTKMERYKVVMDSMTSAELD--DPQIISGSRVHRISRGAGVSPEDVRELL 407
Query: 421 EEYKRLAKIWSKMKGLK 437
+ Y+ + + M+G K
Sbjct: 408 KYYRVMQRALKGMRGSK 424
>gi|448560514|ref|ZP_21633962.1| signal recognition particle protein Srp54 [Haloferax prahovense DSM
18310]
gi|448582785|ref|ZP_21646289.1| signal recognition particle protein Srp54 [Haloferax gibbonsii ATCC
33959]
gi|445722164|gb|ELZ73827.1| signal recognition particle protein Srp54 [Haloferax prahovense DSM
18310]
gi|445732433|gb|ELZ84016.1| signal recognition particle protein Srp54 [Haloferax gibbonsii ATCC
33959]
Length = 463
Score = 309 bits (791), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 170/433 (39%), Positives = 263/433 (60%), Gaps = 21/433 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ ++ ++ + +DE + E + EI R+LL ADV LV ++ +IK
Sbjct: 1 MVLDNLGSSLRGSLDKLRGKSRLDEDDVQEIVKEIQRSLLSADVDVSLVMDLSDSIKTRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ G + R + + ++ EL ++ G+ + P + + IM GLQGSGKTTT K
Sbjct: 61 LEEEPPGGTSARDHVLKIVYEELVGLI--GESTEIPLESQ--TIMLAGLQGSGKTTTSAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KKG +PA++ DTFR GA+DQ KQ +A++ FYG DPV+IA +G+E
Sbjct: 117 MAWWFSKKGLRPAVIQTDTFRPGAYDQAKQMCERAEVDFYGDPDCDDPVQIARDGLEA-- 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
E+ D+ IVDT+GRH E L E+ ++ E V PDL + V+D++IGQ A +QAQ F +S
Sbjct: 175 TEDADVHIVDTAGRHALEDDLIAEIEEI-EGVVQPDLNLLVLDAAIGQGAKEQAQQFDES 233
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
+ +G V++TK+DG AKGGGAL+AV T S + F+G GE + + E F+ F+SRLLGMGD
Sbjct: 234 IGIGGVVITKLDGTAKGGGALTAVNETDSSIAFLGMGETVQDIERFEPNGFISRLLGMGD 293
Query: 301 WSGFMDKIHEVVP------MDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSML 354
+++ + D PE + K GNFTL+ M +Q + + KMGP+ QV M+
Sbjct: 294 LKQLSERVERAMSETQAEDEDWDPEEMMK---GNFTLKDMQKQMEAMNKMGPLDQVLDMI 350
Query: 355 PGFSS---ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGR 411
PGF + +P ++ +++ + +MDSMT EEL+ NP+ + SR+ RIA+GSG+
Sbjct: 351 PGFGGGIKDQLPDDAMDVTKDRMRAFEVVMDSMTEEELE--NPRKVGASRVKRIAQGSGQ 408
Query: 412 QVREVMEMLEEYK 424
+ E+LE+++
Sbjct: 409 DEETIQELLEQHR 421
>gi|302761688|ref|XP_002964266.1| hypothetical protein SELMODRAFT_81201 [Selaginella moellendorffii]
gi|300167995|gb|EFJ34599.1| hypothetical protein SELMODRAFT_81201 [Selaginella moellendorffii]
Length = 221
Score = 308 bits (790), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 147/214 (68%), Positives = 177/214 (82%), Gaps = 2/214 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL +LG IS AIQ+++ AT+ID+K L C+NEIT ALLQADVQFKLV+ + +N++K V
Sbjct: 1 MVLGELGSRISGAIQRLNTATVIDDKALTICVNEITHALLQADVQFKLVQALSSNVRKSV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ LAAGH+KR IIQ+A+F+EL MLD GKPSFTP KG+ +V+M VGLQG GKTTTC+K
Sbjct: 61 --EKLAAGHDKRHIIQKAVFHELRAMLDAGKPSFTPTKGRTNVVMLVGLQGCGKTTTCSK 118
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YA +++KKG+ PALVCADTFRAGAFDQLKQNATK KIPFYGSYTE+DPV IA EGV F
Sbjct: 119 YALHYRKKGFNPALVCADTFRAGAFDQLKQNATKVKIPFYGSYTETDPVVIAQEGVRKFA 178
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVN 214
DLII+DTSGRHKQE ALFEEMRQ++ ATV+
Sbjct: 179 DAKHDLIILDTSGRHKQENALFEEMRQLAAATVS 212
>gi|126179907|ref|YP_001047872.1| signal recognition particle protein Srp54 [Methanoculleus
marisnigri JR1]
gi|125862701|gb|ABN57890.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Methanoculleus marisnigri JR1]
Length = 443
Score = 308 bits (788), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 168/424 (39%), Positives = 259/424 (61%), Gaps = 13/424 (3%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L LG S+ A+++++ T+ID + E + ++ RALL ADV KLV + IK+
Sbjct: 1 MLDNLGTSLKDAVKKLAGKTVIDRAAVEELVRDLQRALLSADVNVKLVMHLSQTIKQRAL 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKML-DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ G R + + ++ EL +M+ PG+ + +P I+ GLQGSGKTTT K
Sbjct: 61 DEEPPKGMGVREHVLRIVYQELVRMMGSPGEVAL-----EPQTILMAGLQGSGKTTTTAK 115
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A Y Q+KG + ++CADTFR GA+DQLK + +P +G E D ++I EG+ ++
Sbjct: 116 LARYFQRKGLRVGVICADTFRPGAYDQLKTLCDRISVPCFGDPKEPDALKIVREGLPKYR 175
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
K ++II+DT GRH E L EE+ ++E + + + V+D+++GQ A +QA+ F ++
Sbjct: 176 K-LYEVIIIDTQGRHALEENLIEEIVNINEIS-HAEHRWLVIDAALGQQASEQARRFHEA 233
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
+ + V+VTKMDG AKGGGALSAVA T+S ++FIG+GE +D+ E FD F+SRLLGMGD
Sbjct: 234 IGIDGVLVTKMDGTAKGGGALSAVAETQSGIVFIGSGETIDDLERFDPDGFISRLLGMGD 293
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
+++ E V + + + +G FTLR MY+Q + + KMGP+ Q+ SMLP
Sbjct: 294 LKALVERAEEAVSGEDLD--VNAMLKGKFTLRDMYKQLEALNKMGPLKQIMSMLP-LGGM 350
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEML 420
+P + K++RY +MDSMT ELD +P + SRI RIARG+G +V +++
Sbjct: 351 QIPDDAYDITSTKMQRYKVIMDSMTPPELD--DPSTLGSSRIQRIARGAGVTPDDVRDLI 408
Query: 421 EEYK 424
+ YK
Sbjct: 409 KYYK 412
>gi|11498230|ref|NP_069456.1| signal recognition particle protein Srp54 [Archaeoglobus fulgidus
DSM 4304]
gi|3334342|sp|O29633.1|SRP54_ARCFU RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|2650007|gb|AAB90619.1| signal recognition particle, subunit SRP54 (srp54) [Archaeoglobus
fulgidus DSM 4304]
Length = 433
Score = 307 bits (787), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 179/418 (42%), Positives = 256/418 (61%), Gaps = 15/418 (3%)
Query: 9 SISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAG 68
S+ ++++ ++ ID+K + E + EI RAL++ADV + V+E+ IKK +D+
Sbjct: 5 SLKEVARKIAGSSSIDKKFVEEMVKEIQRALIKADVNVRQVKEISDAIKKRALSEDVLPA 64
Query: 69 HNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKK 128
N + I + ++ EL + + G KK K IM VGLQGSGKTTT K A Y + +
Sbjct: 65 LNAKEQILKIVYEELLRGVGEG-LEIPLKKAK---IMLVGLQGSGKTTTTAKMAKYFKDR 120
Query: 129 GWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLII 188
G K A+V ADT+R A++QL+Q A + I FYG E D V+I +E K + D+II
Sbjct: 121 GMKVAVVAADTWRPAAYEQLRQLAEEYGITFYGEKGEKDAVKIVKNALEKLK--DHDMII 178
Query: 189 VDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIV 248
+DT+GRH E L +EM +++E PD + V+D++IGQ A QAQAF +++ + +I+
Sbjct: 179 IDTAGRHALEDELIDEMIKIAE-VARPDYKLLVLDAAIGQLASKQAQAFHEAIGINGIII 237
Query: 249 TKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKI 308
TK DG AKGGGALSA P+ FIGTGE +++FE FD FVSRLLGMGD M+KI
Sbjct: 238 TKFDGTAKGGGALSAARQIGIPIAFIGTGEKVEDFERFDPAGFVSRLLGMGDIKALMEKI 297
Query: 309 HEVVPMDQ-QPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGRE 367
+ ++ PE K G FTL+ +Y+Q + + KMGP+ ++F MLP F L
Sbjct: 298 ERIASEEELDPEAFLK---GTFTLKDIYKQIEAMNKMGPVRKIFEMLP-FGLGLKVDNDV 353
Query: 368 KE-SQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLEEYK 424
E +Q K+K++ +MDSMT EEL NPK+++ SRI RIA GSG +EV E+L YK
Sbjct: 354 MEMTQEKMKKFRVIMDSMTEEEL--LNPKIIDSSRIRRIAIGSGTSPQEVKELLNYYK 409
>gi|432330521|ref|YP_007248664.1| signal recognition particle GTPase [Methanoregula formicicum SMSP]
gi|432137230|gb|AGB02157.1| signal recognition particle GTPase [Methanoregula formicicum SMSP]
Length = 442
Score = 307 bits (787), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 172/428 (40%), Positives = 262/428 (61%), Gaps = 14/428 (3%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L L S+ A+++++ T++D +++ + ++ RAL+ +DV KLV E+ I+
Sbjct: 1 MLDNLSSSLKDALKKLAGKTVVDRAAVDDLVKDLQRALISSDVNVKLVMELSKAIRTRSL 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
++ G N R + + ++ EL +++ + T K +P I+ GLQGSGKTTT K
Sbjct: 61 EEEPPKGMNVREHVLRIVYQELVRLV----WASTEVKLEPQTILMAGLQGSGKTTTTAKL 116
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKK 181
A Y QKKG K ++CADTFR GAFDQ+ TK +P +G+ E D ++I EG+ K+
Sbjct: 117 ARYFQKKGMKVGVICADTFRPGAFDQISTLCTKINVPCFGNPQEKDALKITREGLAALKE 176
Query: 182 ENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSV 241
+ +LIIVDT GRH EA L +E+ ++ T V+D+++GQ A +QA+ F +++
Sbjct: 177 Q--ELIIVDTQGRHALEAELIKEIIDLNVLT-KATHRWLVIDAALGQQASEQAKRFHEAI 233
Query: 242 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 301
+ VI+TKMDG AKGGGA+SAVA TKS + FIG+GE +++ E FD F+SRLLGMGD
Sbjct: 234 GIDGVIITKMDGTAKGGGAMSAVAETKSGIAFIGSGETIEDLERFDPDGFISRLLGMGDL 293
Query: 302 SGFMDKIHEVV-PMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
+++ +E + P D + K G FTLR MY+Q + + KMGP+ Q+ MLP + +
Sbjct: 294 KALVERANEAINPEDVDVNAMMK---GKFTLRDMYKQLEALNKMGPLKQIMGMLPLGNMQ 350
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEML 420
L P+G + K+ RY +MDSMT ELD P L+N SR+ RIA G+G EV E++
Sbjct: 351 L-PEGVYDVTSTKMVRYRIIMDSMTAAELD--EPSLINSSRMQRIAHGAGATPDEVRELI 407
Query: 421 EEYKRLAK 428
+ YK + +
Sbjct: 408 KYYKMMQR 415
>gi|88604251|ref|YP_504429.1| signal recognition particle protein Srp54 [Methanospirillum
hungatei JF-1]
gi|88189713|gb|ABD42710.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Methanospirillum hungatei JF-1]
Length = 437
Score = 307 bits (787), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 174/434 (40%), Positives = 262/434 (60%), Gaps = 13/434 (2%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L LG ++ A+++++ T+ID + E + ++ RALLQADV K V ++ IKK
Sbjct: 1 MLDNLGSNLKDALRKLAGKTVIDRAAVEELVKDLQRALLQADVNVKQVMQLSQTIKKRAL 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
+ G R + + ++ EL ++ K T K +I+ GLQGSGKTTT K
Sbjct: 61 DEQPPKGVTAREHVLRIVYEELVALVGQ-KVEVTLGK---QIILMAGLQGSGKTTTTAKL 116
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKK 181
A + ++KG + A++CADTFR GA+ Q+K K +P YG +E D +I EG+ K+
Sbjct: 117 ARFFKRKGMRVAVICADTFRPGAYTQIKTLCDKVHVPCYGDPSEHDARKIVREGLAQLKE 176
Query: 182 ENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSV 241
E +IIVDT GRH E L E+ ++E T V+D+++GQ A +QA+ F ++V
Sbjct: 177 E---VIIVDTQGRHALEDDLITEIIDLNEIT-KATHRWLVLDAALGQQAREQARRFHEAV 232
Query: 242 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 301
S+ VI+TKMDG AKGGGA+SAVA T S ++FIG GE +++ E FD ++SRLLGMGD
Sbjct: 233 SIDGVIITKMDGTAKGGGAMSAVAETGSGIVFIGQGETIEDLEWFDPNSYISRLLGMGDL 292
Query: 302 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 361
+++ E + D+Q + + G FTLR MY Q + + KMGP+ QV SMLP +L
Sbjct: 293 KALAERVQESI--DEQDIDVNAMLSGKFTLRDMYRQLEAVNKMGPLKQVLSMLPLGGMDL 350
Query: 362 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLE 421
P + +K+ +Y +MDSMT ELD +P ++N SRI RIA+G+G Q+ EV E+++
Sbjct: 351 -PTEALDVTASKMGKYRVIMDSMTATELD--DPTVLNGSRIQRIAQGAGAQLEEVRELIK 407
Query: 422 EYKRLAKIWSKMKG 435
YK + + + +KG
Sbjct: 408 YYKMMKRTFKGLKG 421
>gi|448330573|ref|ZP_21519853.1| signal recognition particle protein Srp54 [Natrinema versiforme JCM
10478]
gi|445611451|gb|ELY65203.1| signal recognition particle protein Srp54 [Natrinema versiforme JCM
10478]
Length = 464
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 167/442 (37%), Positives = 265/442 (59%), Gaps = 15/442 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ + ++ + + E+ + E + EI R+LL ADV LV E+ NIK+
Sbjct: 1 MVLDDLGSSLRGTLDKLRGKSRLSEEDIEEIVKEIQRSLLSADVDVSLVMELSDNIKERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG R + + ++ EL ++ G + P + + I+ GLQGSGKTT+ K
Sbjct: 61 LEEEPPAGTPARDFVLRIVYEELVDLI--GDSTELPLEEQ--TILLAGLQGSGKTTSAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KG +PA++ DTFR GA+DQ ++ A +A++ FYG DPV IA EG+E +
Sbjct: 117 MAWWFSTKGLRPAVIQTDTFRPGAYDQAEEMAERAEVDFYGDPDSEDPVEIAREGLE--E 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
+ D+ IVDT+GRH E L E+ ++ E V+PD + V+D++IGQ A DQAQ F +S
Sbjct: 175 TSDADVHIVDTAGRHALEDDLIAEIEEI-EDVVDPDTSLLVLDAAIGQGAKDQAQQFDES 233
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
+ + V++TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 234 IGIDGVVITKLDGTAKGGGALTAVDQTDSSIAFLGTGEEVQDVERFEPDGFISRLLGMGD 293
Query: 301 WSGFMDKIH---EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGF 357
S +++ E M+++ + + +G FTL M +Q + + MGP+ QV M+PG
Sbjct: 294 LSQLAERVERAMEQTDMEEEDWDPEDMLQGQFTLNDMQKQMEAMNNMGPLDQVMDMIPGI 353
Query: 358 SS---ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVR 414
+ +P+ +Q +++ + +MDSMT E + PK + S+I RIARGSG +
Sbjct: 354 GGGIKDQLPEDAMDVTQERMQTFTVIMDSMT--EAEKEYPKAIGASQIQRIARGSGTEEE 411
Query: 415 EVMEMLEEYKRLAKIWSKMKGL 436
+V E+L++YK + + + +G+
Sbjct: 412 QVRELLQQYKMMERTMKQFQGM 433
>gi|448366728|ref|ZP_21554851.1| signal recognition particle protein Srp54 [Natrialba aegyptia DSM
13077]
gi|445654183|gb|ELZ07039.1| signal recognition particle protein Srp54 [Natrialba aegyptia DSM
13077]
Length = 461
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 171/445 (38%), Positives = 264/445 (59%), Gaps = 21/445 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ ++ ++ + I E+ + E + EI R+LL ADV LV E+ NIK+
Sbjct: 1 MVLDDLGSSLRSSLDKLRGKSRISEEDVEEIVKEIQRSLLSADVDVSLVMELSDNIKERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG R + + ++ EL ++ G + P + + I+ GLQGSGKTT+ K
Sbjct: 61 LEEEPPAGTPARDFVLRIVYEELVGLI--GDSTELPLEEQ--TILLAGLQGSGKTTSAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KG +PA++ DTFR GA+DQ K+ A++A++ FYG+ DPV IA +G+E +
Sbjct: 117 MAWWFSTKGLRPAVIQTDTFRPGAYDQAKEMASRAEVDFYGNPDNDDPVEIARKGLE--E 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
D+ IVDT+GRH E L +E+ Q+ E V+PD + V+D++IGQ A +QAQ F +S
Sbjct: 175 TSEADVHIVDTAGRHALEDDLIDEIEQI-EGVVDPDTSLLVLDAAIGQGAKEQAQQFDES 233
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
+ + V++TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 234 IGIDGVVITKLDGTAKGGGALTAVDQTDSSIAFLGTGEEVQDVERFEPDGFISRLLGMGD 293
Query: 301 WSGFMDKIH------EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSML 354
+++ E+ D PE + +G FTL M +Q + + MGP+ QV M+
Sbjct: 294 LGQLAERVERAMEQTEIEEDDWDPE---DMLQGQFTLNDMQKQMEAMNNMGPLDQVMDMI 350
Query: 355 PGFSS---ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGR 411
PGF + +P +Q ++ + +MDSMT E + PK + S+I RIARGSG
Sbjct: 351 PGFGGGIKDQLPDDAMDVTQERMHTFSVIMDSMT--EAEKEYPKAIGASQIERIARGSGT 408
Query: 412 QVREVMEMLEEYKRLAKIWSKMKGL 436
+V E+L++YK + K + +G+
Sbjct: 409 NEDQVRELLQQYKMMEKTIKQFQGM 433
>gi|119719417|ref|YP_919912.1| GTP-binding signal recognition particle [Thermofilum pendens Hrk 5]
gi|119524537|gb|ABL77909.1| signal recognition particle subunit FFH/SRP54 (srp54) [Thermofilum
pendens Hrk 5]
Length = 431
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 165/433 (38%), Positives = 267/433 (61%), Gaps = 17/433 (3%)
Query: 9 SISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAG 68
S+ + ++ ++ ++D + ++ + E+ RALL+ADV LV + IKK ++ G
Sbjct: 7 SLMGVVSRIRSSVLLDSREVDLVIRELQRALLKADVDVGLVLSVSERIKKRFFEEEQPPG 66
Query: 69 HNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKK 128
+K+ ++ + ++ EL +L + P +MFVGL+GSGKTTT K A Y+++K
Sbjct: 67 FSKKEVLVKILYEELVNLLGGEETPELKVSSTPFKVMFVGLEGSGKTTTVAKVANYYKRK 126
Query: 129 GWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLII 188
G++ +V ADT+R GA++QL+ A K +PFYG E D V +A+ GV+ + +I+
Sbjct: 127 GYRVGVVAADTYRPGAYEQLRSLAEKVGVPFYGDPQERDAVSLALRGVKVLSDKGIQMIL 186
Query: 189 VDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIV 248
+DT+GRHK E AL EE++ + V PD V+ V+D++ G A QA+AF++++ G VIV
Sbjct: 187 IDTAGRHKDEEALMEEVKTLYR-EVKPDAVVLVVDATQGSAVARQARAFQEAMPFGYVIV 245
Query: 249 TKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKI 308
KMDG AKGGGALSAVA++K+ VIFIGTGE +++ E F+ K FV+RLLGM D + +
Sbjct: 246 AKMDGSAKGGGALSAVASSKARVIFIGTGEKIEDLEEFNPKKFVARLLGMPDLEALLQRF 305
Query: 309 HEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREK 368
E +++ E + ++ G TL + EQ + + KMGP+ ++ M+ G ++
Sbjct: 306 SEFARLEK--ERARAIASGKITLLDLKEQLEGLRKMGPLSKIAEMM-GLQVKV------S 356
Query: 369 ESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLEEYKRLAK 428
E I +++ +M+SMT EEL NP++++ SR+ RIARGSG R+V ++LE Y+ + K
Sbjct: 357 EEDLNIDKWINIMNSMTMEEL--LNPEIIDSSRMRRIARGSGVSPRDVKQLLEAYRNMKK 414
Query: 429 IW-----SKMKGL 436
+ S+M+GL
Sbjct: 415 VMRQLSRSRMRGL 427
>gi|448351062|ref|ZP_21539872.1| signal recognition particle protein Srp54 [Natrialba taiwanensis
DSM 12281]
gi|445635250|gb|ELY88421.1| signal recognition particle protein Srp54 [Natrialba taiwanensis
DSM 12281]
Length = 461
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 172/445 (38%), Positives = 263/445 (59%), Gaps = 21/445 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ ++ ++ + I E+ + E + EI R+LL ADV LV E+ NIK+
Sbjct: 1 MVLDDLGSSLRSSLDKLRGKSRISEEDIEEIVKEIQRSLLSADVDVSLVMELSDNIKERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG R + + ++ EL ++ G + P + + I+ GLQGSGKTT+ K
Sbjct: 61 LEEEPPAGTPARDFVLRIVYEELVGLI--GDSTELPLEEQ--TILLAGLQGSGKTTSAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KG +PA++ DTFR GA+DQ K+ A +A++ FYG+ DPV IA +G+E +
Sbjct: 117 MAWWFSTKGLRPAVIQTDTFRPGAYDQAKEMAGRAEVDFYGNPDNDDPVEIARKGLE--E 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
D+ IVDT+GRH E L +E+ Q+ E V PD + V+D++IGQ A +QAQ F +S
Sbjct: 175 TSEADVHIVDTAGRHALEDDLIDEIEQI-EGVVEPDTSLLVLDAAIGQGAKEQAQQFDES 233
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
+S+ V++TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 234 ISIDGVVITKLDGTAKGGGALTAVDQTDSSIAFLGTGEEVQDVERFEPDGFISRLLGMGD 293
Query: 301 WSGFMDKIH------EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSML 354
+++ E+ D PE + +G FTL M +Q + + MGP+ QV M+
Sbjct: 294 LGQLAERVERAMEQTEIEEDDWDPE---DMLQGQFTLNDMQKQMEAMNNMGPLDQVMDMI 350
Query: 355 PGFSS---ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGR 411
PGF + +P +Q ++ + +MDSMT E + PK + S+I RIARGSG
Sbjct: 351 PGFGGGIKDQLPDDAMDVTQERMHTFSVIMDSMT--EAEKEYPKAIGASQIERIARGSGT 408
Query: 412 QVREVMEMLEEYKRLAKIWSKMKGL 436
+V E+L++YK + K + +G+
Sbjct: 409 NEDQVRELLQQYKMMEKTIKQFQGM 433
>gi|399576173|ref|ZP_10769930.1| signal recognition particle subunit ffh/srp54 (srp54) [Halogranum
salarium B-1]
gi|399238884|gb|EJN59811.1| signal recognition particle subunit ffh/srp54 (srp54) [Halogranum
salarium B-1]
Length = 466
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 172/437 (39%), Positives = 266/437 (60%), Gaps = 21/437 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ ++ ++ + + ++ + E + EI R+LLQADV+ LV ++ +IKK
Sbjct: 1 MVLDDLGSSLRGSLNKLQGKSRLSKEDVEEIVKEIQRSLLQADVEVALVMDLSKSIKKRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ G R I + ++ E+ +++ G + P + P IM GLQGSGKTTT K
Sbjct: 61 LEEEPPGGTTARDHILKIVYEEMVELV--GDSTEIPLE--PQTIMLAGLQGSGKTTTAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KKG +PA++ DTFR GA+DQ KQ +A++ FYG E DPV+IA EG+E
Sbjct: 117 MAWWFSKKGLRPAVIQTDTFRPGAYDQAKQMCERAEVEFYGDPDEEDPVKIAREGMEA-- 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
++ D+ IVDT+GRH E+ L +E+ ++ EA VNP+L + V+D++IGQ A QAQ F S
Sbjct: 175 TDDADVHIVDTAGRHALESDLIDEIEEIEEA-VNPELNLLVLDAAIGQGAKKQAQEFDNS 233
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
+ +G V++TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 234 IGIGGVVITKLDGTAKGGGALTAVNETGSSISFLGTGETVQDIERFEPNGFISRLLGMGD 293
Query: 301 WSGFMDKIHEVVP------MDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSML 354
+++ + D PE + K G+FTL+ M Q + KMGP+ Q+ M+
Sbjct: 294 LKQLSERVERAMAETQAEDEDWNPEDIMK---GSFTLKDMKRQMDAMNKMGPLDQIMDMI 350
Query: 355 PGFSSELM---PKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGR 411
PG LM P +Q +++ + +MDSMT E++ NP+ + S+I RI+ GSG+
Sbjct: 351 PGLGGGLMDQLPDDAMDVTQNRMRSFEVIMDSMTESEME--NPRSIGASQIQRISHGSGK 408
Query: 412 QVREVMEMLEEYKRLAK 428
+ E+LE++K + +
Sbjct: 409 DEETIRELLEQHKMMER 425
>gi|16081627|ref|NP_393991.1| signal recognition particle protein Srp54 [Thermoplasma acidophilum
DSM 1728]
gi|12230635|sp|Q9HKT0.1|SRP54_THEAC RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|10639683|emb|CAC11655.1| probable signal recognition particle protein [Thermoplasma
acidophilum]
Length = 456
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 174/439 (39%), Positives = 265/439 (60%), Gaps = 13/439 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL S+ I++++ ++ ID++ + E ++ R LL+ADV K V ++ +++
Sbjct: 1 MVLESFSASLRETIRKITGSSYIDKETVKEISKDLQRILLKADVNVKTVLQVTKEMERRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ AG + + + I+ EL K+L G+PS K KP IM VGL G+GKTTT K
Sbjct: 61 LEEKPPAGMAHQDYMVRIIYEELLKIL--GEPSNV--KLKPQTIMLVGLYGNGKTTTAGK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A + KKG L+ AD R A+DQLKQ A++ FYG +E DPVR+ G+E K
Sbjct: 117 LARFFAKKGLNSGLIAADVHRYAAYDQLKQIASEVNAKFYGDQSEKDPVRLIKHGLEQLK 176
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
+ + I+DTSGR +A LF+E+R++ EA V PD V+ ++D+++GQ A +A+AF +
Sbjct: 177 --DVAVKIIDTSGRDSMDAELFDEIRRIKEA-VAPDEVLMIIDATMGQQAGPEAKAFNDA 233
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
+ V +I+TKMDG AKGGGALSAVA P+ FIGTGEHMD+ EVFD K F+SRLLG+GD
Sbjct: 234 IGVTGIIITKMDGTAKGGGALSAVAEIHVPIYFIGTGEHMDDLEVFDPKKFLSRLLGLGD 293
Query: 301 WSGFMDKIHEV-VPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGF-- 357
+ + E + ++ E +KL G F L+ MY+ ++ K G + ++ LP
Sbjct: 294 LESLFETVQEADITEEEAQESFEKLMTGKFNLKDMYDVWEKFSKPGLMKKLVDALPLARI 353
Query: 358 -SSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREV 416
S+ + + + ++ K++ Y +MDSMT EEL+ NP+++N RI RIARG+G + +V
Sbjct: 354 PGSQKIDDSKIQSAEDKLRMYRIIMDSMTFEELE--NPEIINAKRITRIARGAGVREEDV 411
Query: 417 MEMLEEYKRLAKIWSKMKG 435
+L+E+K + MKG
Sbjct: 412 RMLLKEFKAMKNNMKMMKG 430
>gi|448363999|ref|ZP_21552593.1| signal recognition particle protein Srp54 [Natrialba asiatica DSM
12278]
gi|445644887|gb|ELY97894.1| signal recognition particle protein Srp54 [Natrialba asiatica DSM
12278]
Length = 461
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 171/445 (38%), Positives = 263/445 (59%), Gaps = 21/445 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ ++ ++ + I E+ + E + EI R+LL ADV LV E+ NIK+
Sbjct: 1 MVLDDLGSSLRSSLDKLRGKSRISEEDVEEIVKEIQRSLLSADVDVSLVMELSDNIKERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG R + + ++ EL ++ G + P + + I+ GLQGSGKTT+ K
Sbjct: 61 LEEEPPAGTPARDFVLRIVYEELVGLI--GDSTELPLEEQ--TILLAGLQGSGKTTSAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KG +PA++ DTFR GA+DQ K+ A++A++ FYG+ DPV IA +G+E +
Sbjct: 117 MAWWFSTKGLRPAVIQTDTFRPGAYDQAKEMASRAEVDFYGNPDNDDPVEIARKGLE--E 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
D+ IVDT+GRH E L +E+ Q+ E V PD + V+D++IGQ A +QAQ F +S
Sbjct: 175 TSEADVHIVDTAGRHALEDDLIDEIEQI-EGVVEPDTSLLVLDAAIGQGAKEQAQQFDES 233
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
+ + V++TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 234 IGIDGVVITKLDGTAKGGGALTAVDQTDSSIAFLGTGEEVQDVERFEPDGFISRLLGMGD 293
Query: 301 WSGFMDKIH------EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSML 354
+++ E+ D PE + +G FTL M +Q + + MGP+ QV M+
Sbjct: 294 LGQLAERVERAMDQTEIEEDDWDPE---DMLQGQFTLNDMQKQMEAMNNMGPLDQVMDMI 350
Query: 355 PGFSS---ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGR 411
PGF + +P +Q ++ + +MDSMT E + PK + S+I RIARGSG
Sbjct: 351 PGFGGGIKDQLPDDAMDVTQERMHTFSVIMDSMT--EAEKEYPKAIGASQIERIARGSGT 408
Query: 412 QVREVMEMLEEYKRLAKIWSKMKGL 436
+V E+L++YK + K + +G+
Sbjct: 409 NEDQVRELLQQYKMMEKTIKQFQGM 433
>gi|429191533|ref|YP_007177211.1| signal recognition particle GTPase [Natronobacterium gregoryi SP2]
gi|448325331|ref|ZP_21514725.1| signal recognition particle protein Srp54 [Natronobacterium
gregoryi SP2]
gi|429135751|gb|AFZ72762.1| signal recognition particle GTPase [Natronobacterium gregoryi SP2]
gi|445615834|gb|ELY69473.1| signal recognition particle protein Srp54 [Natronobacterium
gregoryi SP2]
Length = 463
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 170/445 (38%), Positives = 259/445 (58%), Gaps = 21/445 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ + + + + E+ + E + EI R+L+ ADV LV+E+ NI+
Sbjct: 1 MVLDDLGSSLRGTLDTLRGKSRVSEEDVEEIVKEIQRSLISADVDIALVQELSDNIEARA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG R + ++ EL ++ G + P + + I+ GLQGSGKTT+ K
Sbjct: 61 LEEEPPAGTPARDFVLSIVYEELVDLI--GDSTELPLEEQ--TILLAGLQGSGKTTSAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KG +PA++ DTFR GA+DQ ++ A +A++ FYG DPV IA +G+E +
Sbjct: 117 MAWWFSTKGLRPAVIQTDTFRPGAYDQAQEMAERAEVDFYGDPDADDPVEIARQGLE--E 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
E D+ IVDT+GRH E L +E+ Q+ E V PD + V+D++IGQ A DQAQ F +S
Sbjct: 175 TEEADVHIVDTAGRHALEDDLIDEIEQI-EGVVEPDTSLLVLDAAIGQGAKDQAQQFDES 233
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
+ + V +TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 234 IGIDGVAITKLDGTAKGGGALTAVDQTDSSIAFLGTGEEVQDVERFEPDGFISRLLGMGD 293
Query: 301 WSGFMDKIHEVVPM------DQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSML 354
+++ + D PE + +GNFTL M +Q + + MG + QV M+
Sbjct: 294 LGQLAERVERAMEQTDLEEDDWDPE---DMLQGNFTLNDMQKQMEAVNNMGALDQVMDMI 350
Query: 355 PGFSS---ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGR 411
PGF S + +P +Q +++ + +MDSMT+ E PK + S+I RIARGSG
Sbjct: 351 PGFGSGVKDQLPDDAMDVTQERMRTFSVIMDSMTDTE--KEYPKAIGASQIERIARGSGT 408
Query: 412 QVREVMEMLEEYKRLAKIWSKMKGL 436
EV E+L++YK + K + +G+
Sbjct: 409 SEDEVRELLQQYKMMEKTIKQFQGM 433
>gi|448407315|ref|ZP_21573703.1| signal recognition particle protein Srp54 [Halosimplex carlsbadense
2-9-1]
gi|445675651|gb|ELZ28180.1| signal recognition particle protein Srp54 [Halosimplex carlsbadense
2-9-1]
Length = 468
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 171/442 (38%), Positives = 262/442 (59%), Gaps = 15/442 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ + + + I E+ + E + +I R+LLQADV LV E+ IK
Sbjct: 1 MVLDDLGTSLRSTLDDLRGQSRISEEDVEEVVKDIQRSLLQADVDVDLVMELSNAIKTRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG + + + +++EL ++ G + P + + IM GL GSGKTTT K
Sbjct: 61 LEEEPPAGTSAHDWVLRVVYDELVGLV--GDSTDLPLESQ--TIMLAGLYGSGKTTTAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KKG +PA++ DT R GA+DQ K+ A +A++ FYG DPVRIA EG+E
Sbjct: 117 MAWWFSKKGLRPAIIQTDTDRPGAYDQSKEMAERAEVDFYGDPDADDPVRIAREGLEA-- 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
E+ D+ IVDT+GR L +++ + EA V PD + V+D+++GQ+A DQAQ F+ S
Sbjct: 175 TEDADIRIVDTAGRDGLNEELIDQIEDI-EAEVQPDRDLLVLDAAMGQSAKDQAQEFEDS 233
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
+ + V++TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 234 IGIDGVVITKLDGTAKGGGALAAVNETGSSIAFLGTGETVSDIERFEPSGFISRLLGMGD 293
Query: 301 WSGFMDKIH---EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGF 357
+++ E ++ + + EG FTL M +Q + + KMGP+ QV M+PG
Sbjct: 294 LKQLTERVERAMEETGEEEDDWDPEDMMEGTFTLHDMRKQMETMNKMGPLDQVMDMIPGM 353
Query: 358 SSELM---PKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVR 414
LM P +Q +++ + +MDSMT EEL+ NP+ + SRI RIARGSG+
Sbjct: 354 GGGLMDQLPDDAMDVTQERLQDFEVVMDSMTEEELE--NPRTVGKSRIERIARGSGKPEE 411
Query: 415 EVMEMLEEYKRLAKIWSKMKGL 436
+ E+LE+Y + ++ + +G+
Sbjct: 412 RIRELLEQYNAMRQMLDQFQGM 433
>gi|449690341|ref|XP_002157121.2| PREDICTED: signal recognition particle 54 kDa protein-like, partial
[Hydra magnipapillata]
Length = 282
Score = 305 bits (781), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 158/299 (52%), Positives = 207/299 (69%), Gaps = 20/299 (6%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA LG I+ A++ +SNAT+I+E+VLN L EI ALL+ADV +LV++++ NIK
Sbjct: 1 MVLADLGRKITSALKSLSNATVINEEVLNLMLKEICAALLEADVNVQLVQKLRANIKNAA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
N +++AAG NKRR+IQ +F ELCK++DPG ++ P KGK +VIMFVGLQGSGKTTTCTK
Sbjct: 61 NFEEMAAGTNKRRLIQHTVFQELCKLVDPGVKAWQPIKGKNNVIMFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AYY+Q+KGWK LVCADTFRA + L + + G Y ++A E ++ +
Sbjct: 121 LAYYYQRKGWKTCLVCADTFRADKINILVETINTSGHSHTGEYL----TQLAREAIDFVR 176
Query: 181 -KENCDL--IIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAF 237
K C + + D A + MRQ +PD +IFVMD+SIGQA QA+AF
Sbjct: 177 CKFGCTVKSFVTD-------NAVDVKSMRQ------SPDNIIFVMDASIGQACEAQARAF 223
Query: 238 KQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLL 296
K+ V V +VI+TK+DGHAKGGGALSAVA T SP+IFIGTGEH+D+FE F +PFVS+LL
Sbjct: 224 KEKVDVASVIITKLDGHAKGGGALSAVAGTSSPIIFIGTGEHIDDFEPFKTQPFVSKLL 282
>gi|171185970|ref|YP_001794889.1| GTP-binding signal recognition particle [Pyrobaculum neutrophilum
V24Sta]
gi|226734219|sp|B1Y9L4.1|SRP54_THENV RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|170935182|gb|ACB40443.1| GTP-binding signal recognition particle SRP54 G- domain
[Pyrobaculum neutrophilum V24Sta]
Length = 433
Score = 305 bits (780), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 176/433 (40%), Positives = 264/433 (60%), Gaps = 13/433 (3%)
Query: 12 RAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNK 71
+ ++++ + IDE L + EI RALL+ADV +V+ K + + AG
Sbjct: 10 KLVEKIRGVSYIDEATLQDLSREIQRALLKADVPLDMVKAFTDAAVKRIKEEKPPAGIPP 69
Query: 72 RRIIQQAIFNELCKMLDPGKP-SFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGW 130
R + ++ EL K+L +P F P K KP V++ +G++GSGKTTT K A K+G+
Sbjct: 70 REYLLYVLYEELVKLLGGEQPPEFKPTK-KPYVVLLLGVEGSGKTTTAAKLAKLLVKRGY 128
Query: 131 KPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVD 190
K LV DT R AFDQL+Q A K +PFYG D V IA GV+ K N D++IVD
Sbjct: 129 KVGLVETDTVRPAAFDQLRQLAEKIGVPFYGERDGKDAVEIARRGVQNLK--NLDVVIVD 186
Query: 191 TSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 250
T+GRH+ E AL +E++ + EA V+PD V+ V+D+++G+ A QA+AF + + + +VI+TK
Sbjct: 187 TAGRHRNEEALLQEVKAIYEA-VSPDEVVLVIDATVGKLAAAQAEAFMRYLPIHSVIITK 245
Query: 251 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 310
MD A+GGGAL+AVA T + V FIG GE +DE E+F + FV+R+LGMGD +++I
Sbjct: 246 MDSTARGGGALAAVAKTGAKVKFIGVGEDVDELEMFIPRKFVARVLGMGDLDALVERIKA 305
Query: 311 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 370
V +Q +Q++ G L +Q +LK+GP+ +VF MLPG + + + + + S
Sbjct: 306 VFEEEQV---IQEIESGKLDLLTFKKQIDGLLKLGPLSKVFQMLPGGLAAKISEEQIELS 362
Query: 371 QAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLEEY---KRLA 427
Q +K++ ++ SMT EEL NP+L+N SRI RIA G+G R+V EML Y KR++
Sbjct: 363 QKNLKKWRAILSSMTVEEL--KNPELLNASRIRRIALGAGVTPRDVKEMLTVYENLKRMS 420
Query: 428 KIWSKMKGLKIPK 440
K + +K+P+
Sbjct: 421 KTLKRQLRMKMPR 433
>gi|448401706|ref|ZP_21571772.1| signal recognition particle protein Srp54 [Haloterrigena limicola
JCM 13563]
gi|445666396|gb|ELZ19062.1| signal recognition particle protein Srp54 [Haloterrigena limicola
JCM 13563]
Length = 463
Score = 304 bits (779), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 171/450 (38%), Positives = 263/450 (58%), Gaps = 21/450 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ + ++ + + E+ + E + EI R+LL ADV LV E+ NIK+
Sbjct: 1 MVLDDLGSSLRGTLDKLRGKSRLSEEDIEEIVKEIQRSLLSADVDVSLVMELSDNIKERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG R + + ++ EL ++ G+ + P + + I+ GLQGSGKTT+ K
Sbjct: 61 LEEEPPAGTPARDFVLRIVYEELVDLI--GESTELPLEEQ--TILLAGLQGSGKTTSAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KG +PA++ DTFR GA++Q K+ +A++ FYG+ DPV IA G+E +
Sbjct: 117 MAWWFSTKGLRPAVIQTDTFRPGAYEQAKEMTERAEVDFYGNPDNDDPVEIARNGLE--E 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
D+ IVDT+GRH E L +E+ + E V PD + V+D++IGQ A DQAQ F +S
Sbjct: 175 TSEADVHIVDTAGRHALEDELIDEIEDI-EDVVEPDTSLLVLDAAIGQGAKDQAQQFDES 233
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
+ + V++TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 234 IGIDGVVITKLDGTAKGGGALTAVDQTDSSIAFLGTGEEVQDIERFEPDGFISRLLGMGD 293
Query: 301 WSGFMDKIH------EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSML 354
S +++ E+ D PE + +G FTL M +Q + + MGP+ QV M+
Sbjct: 294 LSQLAERVERAMEQTEIEEDDWDPE---DMLQGQFTLNDMQKQMEAMNNMGPLDQVMDMI 350
Query: 355 PGFSS---ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGR 411
PGF + +P +Q +++ + +MDSMT E + PK + S+I RIARGSG
Sbjct: 351 PGFGGGIKDQLPDDAMDVTQQRMRTFSVIMDSMT--EAEKEYPKAIGASQIERIARGSGT 408
Query: 412 QVREVMEMLEEYKRLAKIWSKMKGLKIPKK 441
+V E+LE+YK + K + +G+ K+
Sbjct: 409 SEEQVRELLEQYKMMEKTIKQFQGMGSDKE 438
>gi|148508291|gb|ABQ76075.1| signal recognition particle 54K protein [uncultured haloarchaeon]
Length = 465
Score = 304 bits (779), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 165/442 (37%), Positives = 267/442 (60%), Gaps = 15/442 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ ++ ++ + +DE + E + EI R+LL ADV+ LV E+ ++I+
Sbjct: 1 MVLDNLGSSLRGSLDKLQGKSRLDEDDVEEIVKEIQRSLLSADVEVSLVMELSSSIEDRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG + R + + ++ EL ++ G + P K + I+ GLQGSGKTT+ K
Sbjct: 61 TGEEPPAGTSARDHVLRIVYEELVDLV--GDSTDLPLKSQ--TILLAGLQGSGKTTSAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KG +PA++ DTFR GA+DQ +Q +A++ FYG DPV+IA EG+E
Sbjct: 117 MAWWFSTKGLRPAVIQTDTFRPGAYDQAEQMCERAEVSFYGDPDCDDPVKIAREGIEATA 176
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
+ D+ IVDT+GRH EA L +E+ + ++TV PD + V+D++IGQ A QA+ F +
Sbjct: 177 --DADIHIVDTAGRHALEADLIDEIEAI-DSTVAPDRSLLVLDAAIGQGAKQQAREFNNA 233
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
+ + V+VTK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 234 IGIDGVVVTKLDGTAKGGGALTAVNETDSSIAFLGTGETVQDVERFEPNGFISRLLGMGD 293
Query: 301 WSGFMDKIHEVVPMDQQPE---LLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGF 357
+++ + Q+ + + + EG+FTL+ M +Q + + +MGP+ QV M+PG
Sbjct: 294 LKQLSERVERAMAETQEADDDWDPEDIMEGSFTLKDMRKQMEAMDRMGPLDQVMDMIPGL 353
Query: 358 SSEL---MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVR 414
L +P +Q +++ + +MDSMT EL+ +P+ + SR+ RIARGSG
Sbjct: 354 GGGLKDQLPDDAMDVTQNRMRDFDVIMDSMTEAELE--DPRSVGASRVRRIARGSGTDEE 411
Query: 415 EVMEMLEEYKRLAKIWSKMKGL 436
V E+L+++K + + + +G+
Sbjct: 412 TVRELLQQHKMMERTIKQFQGM 433
>gi|110669292|ref|YP_659103.1| signal recognition particle 54K protein [Haloquadratum walsbyi DSM
16790]
gi|121687082|sp|Q18EV2.1|SRP54_HALWD RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|109627039|emb|CAJ53515.1| signal recognition particle 54K protein [Haloquadratum walsbyi DSM
16790]
Length = 466
Score = 304 bits (779), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 165/442 (37%), Positives = 267/442 (60%), Gaps = 15/442 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ ++ ++ + +DE + E + EI R+LL ADV+ LV E+ ++I+
Sbjct: 1 MVLDNLGSSLRGSLDKLQGKSRLDEDDVEEIVKEIQRSLLSADVEVSLVMELSSSIEDRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG + R + + ++ EL ++ G + P K + I+ GLQGSGKTT+ K
Sbjct: 61 TGEEPPAGTSARDHVLRIVYEELVDLV--GDSTDLPLKSQ--TILLAGLQGSGKTTSAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KG +PA++ DTFR GA+DQ +Q +A++ FYG DPV+IA EG+E
Sbjct: 117 MAWWFSTKGLRPAVIQTDTFRPGAYDQAEQMCERAEVSFYGDPDCDDPVKIAREGIEATA 176
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
+ D+ IVDT+GRH EA L +E+ + ++TV PD + V+D++IGQ A QA+ F +
Sbjct: 177 --DADIHIVDTAGRHALEADLIDEIEAI-DSTVAPDRSLLVLDAAIGQGAKQQAREFNNA 233
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
+ + V+VTK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 234 IGIDGVVVTKLDGTAKGGGALTAVNETDSSIAFLGTGETVQDVERFEPNGFISRLLGMGD 293
Query: 301 WSGFMDKIHEVVPMDQQPE---LLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGF 357
+++ + Q+ + + + EG+FTL+ M +Q + + +MGP+ QV M+PG
Sbjct: 294 LKQLSERVERAMAETQEADDDWDPEDIMEGSFTLKDMRKQMEAMDRMGPLDQVMDMIPGL 353
Query: 358 SSEL---MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVR 414
L +P +Q +++ + +MDSMT EL+ +P+ + SR+ RIARGSG
Sbjct: 354 GGGLKDQLPDDAMDVTQNRMRDFDVIMDSMTEAELE--DPRSVGASRVRRIARGSGTDEE 411
Query: 415 EVMEMLEEYKRLAKIWSKMKGL 436
V E+L+++K + + + +G+
Sbjct: 412 TVRELLQQHKMMERTIKQFQGM 433
>gi|385804856|ref|YP_005841256.1| signal recognition particle protein [Haloquadratum walsbyi C23]
gi|339730348|emb|CCC41677.1| signal recognition particle 54K protein [Haloquadratum walsbyi C23]
Length = 466
Score = 304 bits (779), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 165/442 (37%), Positives = 267/442 (60%), Gaps = 15/442 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ ++ ++ + +DE + E + EI R+LL ADV+ LV E+ ++I+
Sbjct: 1 MVLDNLGSSLRGSLDKLQGKSRLDEDDVEEIVKEIQRSLLSADVEVSLVMELSSSIEDRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG + R + + ++ EL ++ G + P K + I+ GLQGSGKTT+ K
Sbjct: 61 TGEEPPAGTSARDHVLRIVYEELVDLV--GDSTDLPLKSQ--TILLAGLQGSGKTTSAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KG +PA++ DTFR GA+DQ +Q +A++ FYG DPV+IA EG+E
Sbjct: 117 MAWWFSTKGLRPAVIQTDTFRPGAYDQAEQMCERAEVSFYGDPDCDDPVKIAREGIEATT 176
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
+ D+ IVDT+GRH EA L +E+ + ++TV PD + V+D++IGQ A QA+ F +
Sbjct: 177 --DADIHIVDTAGRHALEADLIDEIEAI-DSTVAPDRSLLVLDAAIGQGAKQQAREFNNA 233
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
+ + V+VTK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 234 IGIDGVVVTKLDGTAKGGGALTAVNETDSSIAFLGTGETVQDVERFEPNGFISRLLGMGD 293
Query: 301 WSGFMDKIHEVVPMDQQPE---LLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGF 357
+++ + Q+ + + + EG+FTL+ M +Q + + +MGP+ QV M+PG
Sbjct: 294 LKQLSERVERAMAETQEADDDWDPEDIMEGSFTLKDMRKQMEAMDRMGPLDQVMDMIPGL 353
Query: 358 SSEL---MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVR 414
L +P +Q +++ + +MDSMT EL+ +P+ + SR+ RIARGSG
Sbjct: 354 GGGLKDQLPDDAMDVTQNRMRDFDVIMDSMTEAELE--DPRSVGASRVRRIARGSGTDEE 411
Query: 415 EVMEMLEEYKRLAKIWSKMKGL 436
V E+L+++K + + + +G+
Sbjct: 412 TVRELLQQHKMMERTIKQFQGM 433
>gi|322368150|ref|ZP_08042719.1| signal recognition 54 kDa protein [Haladaptatus paucihalophilus
DX253]
gi|320552166|gb|EFW93811.1| signal recognition 54 kDa protein [Haladaptatus paucihalophilus
DX253]
Length = 464
Score = 304 bits (779), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 167/456 (36%), Positives = 279/456 (61%), Gaps = 16/456 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ ++ ++S + + E + E + EI R+LLQADV LV ++ ++IK+
Sbjct: 1 MVLDNLGSSLRGSLDKLSGKSRVSEDDVEEIVKEIQRSLLQADVDVSLVMDLSSSIKERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ G R + ++ EL ++ G+ + P + + I+ GLQGSGKTTT K
Sbjct: 61 LEEEPPGGTTARDHVLSIVYEELVGLV--GESTEIPLENQ--TILLAGLQGSGKTTTSAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KKG +PA++ DTFR GA+DQ K+ ++A++ FYG DPV IA +G+E +
Sbjct: 117 MAWWFSKKGLRPAVIQTDTFRPGAYDQAKEMCSRAEVDFYGDPDNEDPVDIARKGLE--E 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
+ D+ IVDT+GRH E L +E+ ++ E+ V+PD + V+D++IGQ A DQAQ F +S
Sbjct: 175 TADADIHIVDTAGRHALEDDLIDEIEEI-ESVVDPDRNLLVLDAAIGQGAKDQAQQFDES 233
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
+ + V++TK+DG AKGGGAL+AV T S + F+G+GE + + E F+ F+SRLLGMGD
Sbjct: 234 IGIDGVVITKLDGTAKGGGALTAVNETDSSIAFLGSGETVQDVERFEPNGFISRLLGMGD 293
Query: 301 WSGFMDKIHEVVP--MDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFS 358
+++ + +++ + + +G+FTL M Q + KMGP+ QV M+PGF
Sbjct: 294 LKQLTERVERAMSETEEEEDWDPEDMMKGSFTLNDMRHQMNAMNKMGPLEQVMDMIPGFG 353
Query: 359 SELM---PKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVRE 415
+M P ++ +++ + +MDSMT++EL+ NP+ + S+I RIARGSG+
Sbjct: 354 GGIMDELPDDAMDVTKDRMRSFEIIMDSMTDKELE--NPRSIGASQIRRIARGSGQDEER 411
Query: 416 VMEMLEEYKRLAKIWSKMKGLKIPKKGEMSALSRNM 451
+ E+L+++K +++ + +G+ + G+M + + M
Sbjct: 412 IRELLQQHKMMSQTLKQFQGMG--QGGDMERMMKKM 445
>gi|448611250|ref|ZP_21661884.1| signal recognition particle protein Srp54 [Haloferax mucosum ATCC
BAA-1512]
gi|445743682|gb|ELZ95163.1| signal recognition particle protein Srp54 [Haloferax mucosum ATCC
BAA-1512]
Length = 464
Score = 304 bits (778), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 167/433 (38%), Positives = 265/433 (61%), Gaps = 21/433 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ ++ ++ + +DE + E + EI R+LL ADV LV ++ +IK
Sbjct: 1 MVLDNLGSSLRGSLDKLRGKSRLDEDDVQEIVKEIQRSLLSADVDVSLVMDLSDSIKTRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ G + R + + ++ EL ++ G+ + P + + IM GLQGSGKTTT K
Sbjct: 61 LEEEPPGGTSARDHVLKIVYEELVGLI--GESTEIPLESQ--TIMLAGLQGSGKTTTSAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KKG +PA++ DTFR GA+DQ KQ +A++ FYG DPV+IA +G+E
Sbjct: 117 MAWWFSKKGLRPAVIQTDTFRPGAYDQAKQMCERAEVDFYGDPDCDDPVQIARDGLEATA 176
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
+ ++ IVDT+GRH E L +E+ ++ E+ V PDL + V+D++IGQ A +QAQ F +S
Sbjct: 177 --DAEVHIVDTAGRHALEDDLIDEIEEI-ESVVQPDLNMLVLDAAIGQGAKEQAQQFDES 233
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
+ +G V++TK+DG AKGGGAL+AV T S + F+G GE + + E F+ F+SRLLGMGD
Sbjct: 234 IGIGGVVITKLDGTAKGGGALTAVNETDSSIGFLGMGETVQDIERFEPNGFISRLLGMGD 293
Query: 301 WSGFMDKIHEVV------PMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSML 354
+++ + D PE + K G+FTL+ M +Q + + KMGP+ QV M+
Sbjct: 294 LKQLSERVERAMTETQAEDEDWDPEEMMK---GSFTLKDMQKQMEAMNKMGPLDQVLDMI 350
Query: 355 PGFSS---ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGR 411
PGF + +P ++ +++ + +MDSMT+EEL+ NP+ + SR+ RIA+GSG+
Sbjct: 351 PGFGGGIKDQLPDDAMDVTKDRMRSFEVVMDSMTDEELE--NPRKVGASRVRRIAQGSGQ 408
Query: 412 QVREVMEMLEEYK 424
+ E+LE+++
Sbjct: 409 DEETIQELLEQHR 421
>gi|20095048|ref|NP_614895.1| Signal recognition particle GTPase [Methanopyrus kandleri AV19]
gi|23822175|sp|Q8TUY9.1|SRP54_METKA RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|19888324|gb|AAM02825.1| Signal recognition particle GTPase [Methanopyrus kandleri AV19]
Length = 447
Score = 304 bits (778), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 169/440 (38%), Positives = 275/440 (62%), Gaps = 11/440 (2%)
Query: 15 QQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRI 74
+++ A+IIDE + E + ++ RALL+ADV KLV E+ I+K ++ AG KR
Sbjct: 13 KKIKGASIIDEDFVKEVVRDVQRALLEADVDVKLVLELSKRIEKRALEEEPPAGVPKRDY 72
Query: 75 IQQAIFNELCKMLDPGKPS--FTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKP 132
+ + ++ EL ++L K +VIM VGL G GKTTT K A Y Q+KG++
Sbjct: 73 LLRIVYEELVELLGGEKTEGLDIDLSRDVNVIMLVGLYGMGKTTTAAKLARYLQRKGYRV 132
Query: 133 ALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTS 192
LV AD +R A +QL+Q A + +P + + D V +AV+GVE K E CD++IVDT+
Sbjct: 133 GLVGADPYRPAAGEQLRQLAEEVDVPVHVEDVD-DAVEMAVKGVEALKDE-CDVVIVDTA 190
Query: 193 GRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMD 252
GR + L +E+R+++E + P V+ V+D+++GQ A D A+AF ++V + V++TK+D
Sbjct: 191 GRDRLSEDLIDELREMAE-RIEPHEVLLVLDATVGQKAGDHAEAFHEAVQLTGVVITKLD 249
Query: 253 GHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVV 312
AKGGGALSAVA T +P+ F+GTGE +D+ E F+ + FV+RLLG+GD + + E++
Sbjct: 250 TAAKGGGALSAVARTGAPIKFVGTGERVDDLEEFNPRSFVARLLGIGDIDELLRRTEEML 309
Query: 313 PMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQA 372
+++ + + EG FTL+ +YEQ + + KMGP+ ++ +PG + + ++
Sbjct: 310 EEEEK---AEDVLEGEFTLKDLYEQLEALSKMGPVDKLLQYVPGMGGGRNVRKISQITEE 366
Query: 373 KIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLEEYKRLAKIWSK 432
++K+Y +MDSMT +EL+ NP+++N SRI RIA GSG R+V+E+L Y+ + +
Sbjct: 367 RLKKYKVIMDSMTEKELE--NPEILNKSRIRRIAIGSGTSERDVIELLNHYRMMKDVIED 424
Query: 433 MKGLKIPK-KGEMSALSRNM 451
++ +IP+ GE+ + RN+
Sbjct: 425 IQSGRIPRIGGELGRVIRNV 444
>gi|448424654|ref|ZP_21582510.1| signal recognition particle protein Srp54 [Halorubrum terrestre JCM
10247]
gi|448481727|ref|ZP_21605057.1| signal recognition particle protein Srp54 [Halorubrum arcis JCM
13916]
gi|448504282|ref|ZP_21613899.1| signal recognition particle protein Srp54 [Halorubrum distributum
JCM 9100]
gi|448521573|ref|ZP_21618231.1| signal recognition particle protein Srp54 [Halorubrum distributum
JCM 10118]
gi|445681864|gb|ELZ34289.1| signal recognition particle protein Srp54 [Halorubrum terrestre JCM
10247]
gi|445702163|gb|ELZ54123.1| signal recognition particle protein Srp54 [Halorubrum distributum
JCM 9100]
gi|445702513|gb|ELZ54461.1| signal recognition particle protein Srp54 [Halorubrum distributum
JCM 10118]
gi|445821674|gb|EMA71461.1| signal recognition particle protein Srp54 [Halorubrum arcis JCM
13916]
Length = 463
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 167/445 (37%), Positives = 265/445 (59%), Gaps = 21/445 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ ++ ++ + + E + E + EI R+LL ADV LV E+ +IK
Sbjct: 1 MVLDDLGTSLRSSLDKLQGKSRLSESDVEEIVKEIQRSLLSADVDVSLVMELSDSIKSRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ G + + + ++ E+ +++ G + P + + I+ GLQGSGKTT+ K
Sbjct: 61 LEEEPPGGTTAKDHVLKIVYEEMVELV--GDSTELPLENQ--TILLAGLQGSGKTTSAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KKG +PA++ DTFR GA+DQ KQ +A++ FYG+ DPV IA G+E +
Sbjct: 117 MAWWFSKKGLRPAVIQTDTFRPGAYDQAKQMCERAEVDFYGNPDNDDPVDIARTGLE--E 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
E+ D+ IVDT+GRH E L E+ ++ E V+PD + V+D++IGQ A DQA+ F++S
Sbjct: 175 TEDADVHIVDTAGRHALEDDLIAEIEEI-EGVVDPDRSLLVLDAAIGQGAKDQARQFEKS 233
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
+ + V++TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 234 IGIEGVVITKLDGTAKGGGALTAVNETDSSIAFLGTGETVQDIERFEPSGFISRLLGMGD 293
Query: 301 WSGFMDKIHEVVPMDQQ------PELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSML 354
+++ + Q+ PE + +G FTL+ M Q + KMGP+ QV M+
Sbjct: 294 LKQLSERVERAMQETQEEDGDWDPE---DMLQGEFTLKDMKRQMDAMNKMGPLDQVMDMI 350
Query: 355 PGFSSELM---PKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGR 411
PG +M P +Q +++R+ +MDSMT EEL+ NP+++ SR+ RIARGSG
Sbjct: 351 PGLGGGMMDELPDDAMDVTQDRMRRFERIMDSMTEEELE--NPRVVGQSRVERIARGSGT 408
Query: 412 QVREVMEMLEEYKRLAKIWSKMKGL 436
V ++LE++ + + + +G+
Sbjct: 409 DEETVQQLLEQHSMMEETIGQFQGM 433
>gi|76800703|ref|YP_325711.1| signal recognition particle 54K protein [Natronomonas pharaonis DSM
2160]
gi|121718419|sp|Q3IUP1.1|SRP54_NATPD RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|76556568|emb|CAI48139.1| signal recognition particle 54K protein [Natronomonas pharaonis DSM
2160]
Length = 466
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 168/444 (37%), Positives = 264/444 (59%), Gaps = 20/444 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ + ++ T + E + E + EI R+LL ADV LV ++ +I++
Sbjct: 1 MVLDDLGSSLRGTLDKLQGKTTLSEDDVEEIVKEIQRSLLSADVDVDLVMDLSDSIRERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG R + + ++ E+ +++ G+ + P + + I+ GLQGSGKTTT K
Sbjct: 61 LDEEPPAGTTARDHVLKIVYEEMVELV--GESTALPLEEQ--TIVLAGLQGSGKTTTAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KKG +PA++ DTFR GA+DQ K+ +A++ FYG+ DPV IA G+E +
Sbjct: 117 MAWWFSKKGLRPAVIQTDTFRPGAYDQAKEMCERAEVDFYGNPDSDDPVEIAERGLE--E 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
+ D+ IVDT+GRH E AL +E+ + E+ V+PD + V+D++IGQ A DQA+ F +
Sbjct: 175 TADADVHIVDTAGRHALEEALIDELEAI-ESAVDPDRNLLVLDAAIGQGAKDQAERFHDA 233
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V + V +TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 234 VGIDGVAITKLDGTAKGGGALAAVDQTDSSIAFLGTGEEVKDIERFEPSGFISRLLGMGD 293
Query: 301 WSGFMDKIHEVV-----PMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLP 355
+++ + D PE L K G FTL+ M Q + KMGP+ QV M+P
Sbjct: 294 LKQLSERVERAMEETQAEEDWDPEDLMK---GEFTLKDMRNQMNAMNKMGPLDQVMDMIP 350
Query: 356 GFSS---ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQ 412
G + +P +Q +++ + +MDSM+ EL+ NP+ + S+I RIARGSG
Sbjct: 351 GLGGGIKDQLPDDAMDMTQERLRDFEVIMDSMSEAELE--NPRAIGQSQIERIARGSGTD 408
Query: 413 VREVMEMLEEYKRLAKIWSKMKGL 436
V E+LE++K ++++ + +G+
Sbjct: 409 EDTVRELLEQHKMMSRMMKQFQGM 432
>gi|374629551|ref|ZP_09701936.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Methanoplanus limicola DSM 2279]
gi|373907664|gb|EHQ35768.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Methanoplanus limicola DSM 2279]
Length = 439
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 170/434 (39%), Positives = 263/434 (60%), Gaps = 12/434 (2%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L +LG + A+++++ T+ID + E + ++ R LLQADV KLV + IKK
Sbjct: 1 MLDRLGTGLKDAVKKLAGKTVIDRAAVEELVKDLQRVLLQADVNVKLVMNLSKAIKKRSL 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
++ G + R + + ++ EL ++ T G P +I+ GLQGSGKTTT K
Sbjct: 61 EEEPPKGMSVREHVLRIVYQELVNLMGD---EVTVTLG-PQIILMAGLQGSGKTTTTGKL 116
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKK 181
A Y Q+KG + ++CAD FR GA+DQLK K +P YG +D V+I G+ K
Sbjct: 117 ARYFQRKGLRVGVICADVFRPGAYDQLKNLCNKVNVPCYGEPGVTDAVKIVENGIRELK- 175
Query: 182 ENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSV 241
N +++I+DT GRH E L E+ ++ T V+D+++GQ A +QA F +++
Sbjct: 176 -NTEVLIIDTQGRHALEDDLISEIIDLNNLT-KATHRWLVIDAALGQQAKEQAARFHEAI 233
Query: 242 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 301
S+ VI+TKMDG AKGGGALSAVA T S ++F G+GE +++ E FD F+SRLLGMGD
Sbjct: 234 SIDGVIITKMDGTAKGGGALSAVAETGSGIVFTGSGETIEDLERFDPDSFISRLLGMGDL 293
Query: 302 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 361
++K EV+ D++ + + + +G FTLR MY+Q +++ KMGP+ QV SMLP +++
Sbjct: 294 KSLIEKAEEVMA-DEEFD-VNAMMKGKFTLRDMYKQLESLKKMGPLKQVMSMLPMGGAKI 351
Query: 362 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLE 421
P+ + K++RY +MDSMTN+EL+ NP +++ SR+ RI+ G+G EV E+L+
Sbjct: 352 -PEDVFDTTSVKMERYKIIMDSMTNDELE--NPSVISGSRVHRISLGAGATPEEVRELLK 408
Query: 422 EYKRLAKIWSKMKG 435
YK + + +G
Sbjct: 409 YYKTMQRAIKGFRG 422
>gi|354609783|ref|ZP_09027739.1| Signal recognition 54 kDa protein [Halobacterium sp. DL1]
gi|353194603|gb|EHB60105.1| Signal recognition 54 kDa protein [Halobacterium sp. DL1]
Length = 460
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 171/460 (37%), Positives = 273/460 (59%), Gaps = 24/460 (5%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ + + + I E+ +++ + EI R+LLQADV LV ++ +IK+
Sbjct: 1 MVLDDLGSSLRGTLDTLRGKSRISEEDVDDVVKEIQRSLLQADVDVSLVMDLSDSIKERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ +G + R + + ++ EL +++ G + P + + I+ GLQGSGKTTT K
Sbjct: 61 LEEEPPSGTSARDHVLRIVYEELVELV--GDSTNIPLEDQ--TILLAGLQGSGKTTTAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KKG +PA++ DTFR GA+DQ K+ +A++ FYG DPV+IA +G+E
Sbjct: 117 MAWWFSKKGLRPAVIQTDTFRPGAYDQAKEMTERAEVEFYGDPDGEDPVQIARDGLEA-- 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
E+ D+ IVDT+GRH E L E+ ++ A V+PD + V+D++IGQ A DQA+ F +S
Sbjct: 175 TEDADVHIVDTAGRHALEDDLISEIEEIERA-VDPDRNLLVLDAAIGQGAKDQAKQFDES 233
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
+ + V +TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 234 IGIDGVTITKLDGTAKGGGALTAVNETGSTIAFLGTGETVQDVERFEPDSFISRLLGMGD 293
Query: 301 WSGFMDKIHEVVPMDQQ------PELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSML 354
+++ + Q+ PE + K G FTL M +Q Q + MGP+ QV M+
Sbjct: 294 LKQLTERVERAMHETQEGEDDWDPEDMMK---GEFTLHDMRKQMQAMDNMGPLDQVMDMI 350
Query: 355 PGFSSELM---PKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGR 411
PG LM P +Q +++ + +MDSMT E+ +NP+ + S++ RIA+GSG+
Sbjct: 351 PGMGGGLMDELPDNAMDVTQDRMRNFEVIMDSMTEAEM--ANPRSVGASQVKRIAKGSGQ 408
Query: 412 QVREVMEMLEEYKRLAKIWSKMKGLKIPKKGEMSALSRNM 451
V E+L+++K +A+ + +G+ G+M + + M
Sbjct: 409 SEETVKELLDQHKMMARTMKQFQGM---GDGDMQRMMKKM 445
>gi|448435673|ref|ZP_21586809.1| signal recognition particle protein Srp54 [Halorubrum
tebenquichense DSM 14210]
gi|445683398|gb|ELZ35794.1| signal recognition particle protein Srp54 [Halorubrum
tebenquichense DSM 14210]
Length = 464
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 166/442 (37%), Positives = 263/442 (59%), Gaps = 15/442 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ ++ ++ T + E + E + EI R+LL ADV LV E+ +IK
Sbjct: 1 MVLDDLGTSLRSSLDKLQGKTTLSESDVEEIVKEIQRSLLSADVDVSLVMELSDSIKSRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ G R + + ++ E+ +++ G + P + + I+ GLQGSGKTT+ K
Sbjct: 61 LEEEPPGGTTARDHVLRIVYEEMVELV--GDSTELPLENQ--TILLAGLQGSGKTTSAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KKG +PA++ DTFR GA+DQ KQ +A++ FYG+ DPV IA G+E +
Sbjct: 117 MAWWFSKKGLRPAVIQTDTFRPGAYDQAKQMCERAEVEFYGNPDNDDPVDIARTGLE--E 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
E+ D+ IVDT+GRH E L +E+ ++ E V+PD + V+D++IGQ A +QA+ F+ S
Sbjct: 175 TEDADVHIVDTAGRHALEDDLIDEIEEI-EGVVDPDRSLLVLDAAIGQGAKEQARQFEAS 233
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
+ + V++TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 234 IGIEGVMITKLDGTAKGGGALTAVNETDSSIAFLGTGETVQDIERFEPSGFISRLLGMGD 293
Query: 301 WSGFMDKIHEVVPMDQ---QPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGF 357
+++ + Q + + +G FTL+ M Q + KMGP+ QV M+PG
Sbjct: 294 LKQLSERVERAMQETQDEDDDWDPEDMLKGEFTLKDMKRQMDAMNKMGPLDQVMDMIPGL 353
Query: 358 SSELM---PKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVR 414
+M P +Q +++R+ +MDSMT EEL+ NP+++ SR+ RIARGSG
Sbjct: 354 GGGMMDELPDDAMDVTQDRMRRFERIMDSMTEEELE--NPRVVGQSRVERIARGSGTDEE 411
Query: 415 EVMEMLEEYKRLAKIWSKMKGL 436
V ++LE++ + + + +G+
Sbjct: 412 TVQQLLEQHSMMEETIGQFQGM 433
>gi|448303902|ref|ZP_21493848.1| signal recognition particle protein Srp54 [Natronorubrum
sulfidifaciens JCM 14089]
gi|445592529|gb|ELY46716.1| signal recognition particle protein Srp54 [Natronorubrum
sulfidifaciens JCM 14089]
Length = 460
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 170/450 (37%), Positives = 263/450 (58%), Gaps = 21/450 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ + ++ + + E+ + E + EI R+LL ADV LV E+ NIK
Sbjct: 1 MVLDDLGSSLRGTLDKLRGKSRLSEEDIEEIVKEIQRSLLSADVDVSLVMELSDNIKDRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG R + + ++ EL ++ G+ + P + + I+ GLQGSGKTT+ K
Sbjct: 61 LEEEPPAGTPARDFVLRIVYEELVDLI--GESTELPLEEQ--TILLAGLQGSGKTTSAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KG +PA++ DTFR GA++Q +Q A +A++ +YG+ DPV IA +G+E +
Sbjct: 117 MAWWFSTKGLRPAVIQTDTFRPGAYEQAQQMAGRAEVDYYGNPDSEDPVEIARKGLE--E 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
D+ IVDT+GRH E L +E+ Q+ E V PD + V+D++IGQ A DQAQ F +S
Sbjct: 175 TSEADVHIVDTAGRHALEDDLIDEIEQI-EGVVEPDTSLLVLDAAIGQGAKDQAQQFDES 233
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
+ + V++TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 234 IGIDGVVITKLDGTAKGGGALTAVDQTDSSIAFLGTGEEVQDIERFEPDGFISRLLGMGD 293
Query: 301 WSGFMDKIH------EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSML 354
+++ E+ D +PE + G FTL M +Q + + MGP+ QV M+
Sbjct: 294 LGQLAERVERAMEQTEIEDDDWEPE---DMLSGQFTLNDMQKQMEAMNNMGPLDQVMDMI 350
Query: 355 PGFSS---ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGR 411
PGF + +P +Q +++ + +MDSMT+ E PK + S+I RIARGSG
Sbjct: 351 PGFGGGIKDQLPDDAMDVTQERMRTFSVIMDSMTDAE--KEYPKAIGASQIERIARGSGT 408
Query: 412 QVREVMEMLEEYKRLAKIWSKMKGLKIPKK 441
V E+L++YK + K + +G+ K+
Sbjct: 409 NEENVRELLQQYKMMEKTIKQFQGMGSEKE 438
>gi|389845623|ref|YP_006347862.1| signal recognition particle protein [Haloferax mediterranei ATCC
33500]
gi|448616760|ref|ZP_21665470.1| signal recognition particle protein Srp54 [Haloferax mediterranei
ATCC 33500]
gi|388242929|gb|AFK17875.1| signal recognition particle 54K protein [Haloferax mediterranei
ATCC 33500]
gi|445751415|gb|EMA02852.1| signal recognition particle protein Srp54 [Haloferax mediterranei
ATCC 33500]
Length = 464
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 166/433 (38%), Positives = 265/433 (61%), Gaps = 21/433 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ ++ ++ + +DE + E + EI R+LL ADV LV ++ +IK
Sbjct: 1 MVLDNLGSSLRGSLDKLRGKSRLDEDDVQEIVKEIQRSLLSADVDVSLVMDLSDSIKTRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ G + R + + ++ EL ++ G+ + P + + IM GLQGSGKTTT K
Sbjct: 61 LEEEPPGGTSARDHVLKIVYEELVGLI--GESTDIPLESQ--TIMLAGLQGSGKTTTSAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KKG +PA++ DTFR GA+DQ KQ +A++ FYG DPV+IA +G+E
Sbjct: 117 MAWWFSKKGLRPAVIQTDTFRPGAYDQAKQMCERAEVDFYGDPDCDDPVQIARDGLEA-- 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
E+ ++ IVDT+GRH E L E+ ++ E+ V PDL + V+D++IGQ A +QAQ F +S
Sbjct: 175 TEDAEVHIVDTAGRHALEDDLIAEIEEI-ESVVQPDLNMLVLDAAIGQGAKEQAQQFDES 233
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
+ +G V++TK+DG AKGGGAL+AV T S + F+G GE + + E F+ F+SRLLGMGD
Sbjct: 234 IGIGGVVITKLDGTAKGGGALTAVNETDSSIGFLGMGETVQDIERFEPNGFISRLLGMGD 293
Query: 301 WSGFMDKIHEVVP------MDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSML 354
+++ + D PE ++ +G+FTL+ M +Q + + KMGP+ QV M+
Sbjct: 294 LKQLSERVERAMSETQAEDEDWDPE---EMMQGSFTLKDMQKQMEAMNKMGPLDQVLDMI 350
Query: 355 PGFSS---ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGR 411
PGF + +P ++ +++ + +MDSMT EEL+ NP+ + SR+ RI++GSG+
Sbjct: 351 PGFGGGIKDQLPDDAMDVTKDRMRSFEVIMDSMTEEELE--NPRKVGASRVKRISQGSGQ 408
Query: 412 QVREVMEMLEEYK 424
+ E+LE+++
Sbjct: 409 DEETIQELLEQHR 421
>gi|448375496|ref|ZP_21558973.1| signal recognition particle protein Srp54 [Halovivax asiaticus JCM
14624]
gi|445658767|gb|ELZ11583.1| signal recognition particle protein Srp54 [Halovivax asiaticus JCM
14624]
Length = 465
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 168/450 (37%), Positives = 262/450 (58%), Gaps = 21/450 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ + + + I E + + EI R+LL ADV LV E+ NI+
Sbjct: 1 MVLDDLGSSLRGTLDDLRGKSRISEADVESVVTEIQRSLLSADVDVSLVMELSENIETRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG R + + ++ EL ++ G+ + P + + I+ GLQGSGKTT+ K
Sbjct: 61 LEEEPPAGTPARDFVLRIVYEELVDLI--GESTELPLEDQ--TILLAGLQGSGKTTSAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KG KPA++ DTFR GAFDQ KQ +A++ FYG DPV IA G+E +
Sbjct: 117 MAWWFSTKGLKPAVIQTDTFRPGAFDQAKQMTERAEVEFYGDPDSEDPVEIARTGLE--E 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
N D+ IVDT+GRH E L +E+ ++ E V+PD+ + V+D++IGQ A DQA+ F S
Sbjct: 175 TANADVHIVDTAGRHALEDDLIDEIEEI-ERVVDPDISLLVLDAAIGQGAKDQAREFHDS 233
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
+ + V++TK+DG AKGGGAL+AV T S + F+GTGE +D+ E F+ + F+SRLLGMGD
Sbjct: 234 IGIDGVVITKLDGTAKGGGALAAVDQTDSSIAFLGTGEEVDDIERFEPEGFISRLLGMGD 293
Query: 301 WSGFMDKIH------EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSML 354
+ +++ ++ D PE ++ +GNFTL M +Q + + MGP+ QV M+
Sbjct: 294 LAQLAERVERAMDQTDIEEDDWDPE---EMLQGNFTLNDMQKQLEAMNNMGPLSQVLDMI 350
Query: 355 PGFSS---ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGR 411
PG + +P ++ ++ + +MDSMT+ E P+ + S+I RIARGSG
Sbjct: 351 PGMGGGIKDQLPDDAMDVTEERMHTFRVIMDSMTDAE--KEYPRAIGASQIERIARGSGT 408
Query: 412 QVREVMEMLEEYKRLAKIWSKMKGLKIPKK 441
V E+L+++K + + + +G+ K+
Sbjct: 409 SEESVRELLDQFKLMERTMKQFQGMGSEKE 438
>gi|76154974|gb|AAX26359.2| SJCHGC03967 protein [Schistosoma japonicum]
Length = 235
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 140/236 (59%), Positives = 187/236 (79%), Gaps = 1/236 (0%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVLA+LG I+ A++ + NATII+E VLN L EI AL++ADV +LV++++ N++ ++
Sbjct: 1 MVLAELGRKITNALRSLGNATIINEDVLNSLLKEICTALIEADVNIRLVKQLRENVRAVI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ D++AAG NKR+IIQ A+F EL ++DP ++ P +G P+VIM VGLQG GKTTT TK
Sbjct: 61 DFDEMAAGLNKRKIIQSAVFKELVHLVDPQVKAWQPARGSPNVIMLVGLQGCGKTTTATK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
AY++Q+KGWK ++CADTFRAGAFDQLKQNATKA+IPFYGSYTE+DPV IA +GV+ F
Sbjct: 121 LAYFYQRKGWKTCMICADTFRAGAFDQLKQNATKARIPFYGSYTETDPVVIARDGVQKFV 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQA 236
++ ++IIVDTSGRH+QE +LFEEM QVS A + PD VI+V+D+SIGQA QA A
Sbjct: 181 EDKFEIIIVDTSGRHRQEDSLFEEMLQVSNA-IEPDHVIYVLDASIGQACEAQASA 235
>gi|289581472|ref|YP_003479938.1| GTP-binding signal recognition particle SRP54 G- domain-containing
protein [Natrialba magadii ATCC 43099]
gi|448283112|ref|ZP_21474391.1| signal recognition particle protein Srp54 [Natrialba magadii ATCC
43099]
gi|289531025|gb|ADD05376.1| GTP-binding signal recognition particle SRP54 G- domain protein
[Natrialba magadii ATCC 43099]
gi|445574820|gb|ELY29308.1| signal recognition particle protein Srp54 [Natrialba magadii ATCC
43099]
Length = 464
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 170/445 (38%), Positives = 261/445 (58%), Gaps = 21/445 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ ++ ++ + I E+ + E + EI R+LL ADV LV E+ NIK+
Sbjct: 1 MVLDDLGSSLRGSLDKLRGKSRISEEDVEEIVKEIQRSLLSADVDVSLVMELSDNIKERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG R + + ++ EL ++ G + P + + I+ GLQGSGKTT+ K
Sbjct: 61 LEEEPPAGTPARDFVLRIVYEELVGLI--GDSTELPLEEQ--TILLAGLQGSGKTTSSAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KG +PA++ DTFR GA+DQ K+ A +A++ FYG+ DPV IA +G+E
Sbjct: 117 MAWWFSTKGLRPAIIQTDTFRPGAYDQAKEMAGRAEVDFYGNPDNDDPVEIARKGLEATS 176
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
+ D+ IVDT+GRH E L E+ Q+ E V PD + V+D++IGQ A +QAQ F +S
Sbjct: 177 E--ADVHIVDTAGRHALEDDLIAEIEQI-EGVVEPDTSLLVLDAAIGQGAKEQAQQFDES 233
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
+ + V++TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 234 IGIDGVVITKLDGTAKGGGALTAVDQTDSSIAFLGTGEEVQDVERFEPDSFISRLLGMGD 293
Query: 301 WSGFMDKIH------EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSML 354
+++ ++ D PE + +G FTL M +Q + + MGP+ QV M+
Sbjct: 294 LGQLAERVERAMEQTQIEDDDWDPE---DMLQGQFTLNDMQKQMEAMNNMGPLDQVMDMI 350
Query: 355 PGFSS---ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGR 411
PGF + +P +Q ++ + +MDSMT+ E PK + S+I RIARGSG
Sbjct: 351 PGFGGGIKDQLPDDAMDVTQERMHSFSVIMDSMTDAE--KEYPKAIGASQIERIARGSGT 408
Query: 412 QVREVMEMLEEYKRLAKIWSKMKGL 436
+V E+L++YK + K + +G+
Sbjct: 409 SEEQVRELLQQYKMMEKTIKQFQGM 433
>gi|448380959|ref|ZP_21561316.1| signal recognition particle protein Srp54 [Haloterrigena
thermotolerans DSM 11522]
gi|445663615|gb|ELZ16358.1| signal recognition particle protein Srp54 [Haloterrigena
thermotolerans DSM 11522]
Length = 464
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 167/447 (37%), Positives = 264/447 (59%), Gaps = 15/447 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ + ++ + + E+ + E + EI R+LL ADV LV E+ +IK+
Sbjct: 1 MVLDDLGSSLRGTLDKLRGKSRLSEEDIEEIVKEIQRSLLSADVDVSLVMELSDSIKERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG R + + ++ EL ++ G + P + + I+ GLQGSGKTT+ K
Sbjct: 61 LEEEPPAGTPARDFVLRIVYEELVDLI--GDSTELPLEEQ--TILLAGLQGSGKTTSAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KG +PA++ DTFR GA+DQ ++ A +A++ FYG+ DPV IA +G+E +
Sbjct: 117 MAWWFSTKGLRPAVIQTDTFRPGAYDQAEEMAERAEVEFYGNPDSEDPVEIARKGLE--E 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
D+ IVDT+GRH E L +E+ Q+ E V PD + V+D++IGQ A +QAQ F +S
Sbjct: 175 TSEADVHIVDTAGRHALEDDLIDEIEQI-EGVVEPDTSLLVLDAAIGQGAKEQAQQFDES 233
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
+ + V++TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 234 IGIDGVVITKLDGTAKGGGALTAVDQTDSSIAFLGTGEEVQDIERFEPDGFISRLLGMGD 293
Query: 301 WSGFMDKIH---EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGF 357
S +++ E M++ + + +G FTL M +Q + + MGP+ QV M+PG
Sbjct: 294 LSQLAERVERAMEQTEMEEDDWDPEDMLQGQFTLNDMQKQMEAMNNMGPLDQVMDMIPGL 353
Query: 358 SS---ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVR 414
+ +P +Q +++ + +MDSMT+ E PK + S+I RIARGSG
Sbjct: 354 GGGIKDQLPDDAMDVTQERMRTFSVIMDSMTDAE--KEYPKAIGASQIQRIARGSGTSEE 411
Query: 415 EVMEMLEEYKRLAKIWSKMKGLKIPKK 441
EV E+L++YK + + + +G+ K+
Sbjct: 412 EVRELLQQYKMMERTIKQFQGMGSEKE 438
>gi|429217180|ref|YP_007175170.1| signal recognition particle GTPase [Caldisphaera lagunensis DSM
15908]
gi|429133709|gb|AFZ70721.1| signal recognition particle GTPase [Caldisphaera lagunensis DSM
15908]
Length = 446
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 177/438 (40%), Positives = 273/438 (62%), Gaps = 12/438 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL L ++++ ++ +T D + E + ++ R L+++DV KLV+E+ NIKK
Sbjct: 1 MVLEGLRNAVTKFLK--GGSTYKDS--VEEFIKDLQRELIKSDVNIKLVKELSENIKKKA 56
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLD-PGKPSFTPKKGKPSVIMFVGLQGSGKTTTCT 119
++ +G +++ + +++EL + P PKK P +I+ VG+QGSGKTTT
Sbjct: 57 LEEEPPSGISRKEWFIKIVYDELSNLFGGDTTPDVEPKK-IPWIILLVGVQGSGKTTTAG 115
Query: 120 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
K A ++ KKG+K LV ADT+R GA++QLK + + FYG + I++ GVE F
Sbjct: 116 KLASFYVKKGYKVGLVAADTYRPGAYEQLKMLSNLSGAMFYGDQNNNKAEEISINGVEYF 175
Query: 180 KKENCDLIIVDTSGRHK--QEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAF 237
K +N D+II+DT+GRH E +L +EMR +S V PD VI V+DSSIGQ AFD A+ F
Sbjct: 176 KNKNADIIIIDTAGRHGYGNEKSLLDEMRNISNK-VKPDEVILVLDSSIGQKAFDLAKQF 234
Query: 238 KQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLG 297
++ +G++IVTK+DG AKGGG LSA+AAT + V FIGTGE +DE E+F+ FVSRLLG
Sbjct: 235 HETTPIGSIIVTKLDGTAKGGGVLSAIAATGARVKFIGTGEKIDELELFNPSKFVSRLLG 294
Query: 298 MGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGF 357
+GD ++KI V +L + L++G T+R +Y Q +++ KMGP ++ MLP
Sbjct: 295 LGDLDALLEKIKSVQDNINIEKLQEDLAKGKITMRTLYAQLKSLRKMGPFSKILQMLPTS 354
Query: 358 SSELMPKGRE-KESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREV 416
S + K + K + K+ +++ +++SMT EELD NP +++ R+ RIA GSG + +V
Sbjct: 355 SLPVQIKNEQLKIGEEKVDKWLHIIESMTYEELD--NPDIIDRKRMRRIAIGSGTSIEDV 412
Query: 417 MEMLEEYKRLAKIWSKMK 434
+++ YK L I ++K
Sbjct: 413 KDLIVYYKNLKAIMKRIK 430
>gi|433637372|ref|YP_007283132.1| signal recognition particle GTPase [Halovivax ruber XH-70]
gi|433289176|gb|AGB14999.1| signal recognition particle GTPase [Halovivax ruber XH-70]
Length = 465
Score = 302 bits (773), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 168/450 (37%), Positives = 262/450 (58%), Gaps = 21/450 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ + + + I E + + EI R+LL ADV LV E+ NI+
Sbjct: 1 MVLDDLGSSLRGTLDDLRGKSRISEADVESVVTEIQRSLLSADVDVSLVMELSENIETRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG R + + ++ EL ++ G+ + P + + I+ GLQGSGKTT+ K
Sbjct: 61 LEEEPPAGTPARDFVLRIVYEELVDLI--GESTELPLEDQ--TILLAGLQGSGKTTSAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KG KPA++ DTFR GA+DQ +Q +A++ FYG DPV IA G+E +
Sbjct: 117 MAWWFSTKGLKPAVIQTDTFRPGAYDQAEQMTERAEVDFYGDPDAEDPVEIARTGLE--E 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
N D+ IVDT+GRH EA L +E+ ++ E V+PD + V+D++IGQ A DQA+ F S
Sbjct: 175 TANADVHIVDTAGRHALEADLIDEIEEI-ERVVDPDTSLLVLDAAIGQGAKDQAREFHDS 233
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
+ + V++TK+DG AKGGGAL+AV T S + F+GTGE +D+ E F+ + F+SRLLGMGD
Sbjct: 234 IGIDGVVITKLDGTAKGGGALAAVDQTDSSIAFLGTGEEVDDIERFEPEGFISRLLGMGD 293
Query: 301 WSGFMDKIH------EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSML 354
+ +++ ++ D PE ++ +GNFTL M +Q + + MGP+ QV M+
Sbjct: 294 LAQLAERVERAMDQTDIEEDDWDPE---EMLQGNFTLNDMQKQLEAMNNMGPLSQVLDMI 350
Query: 355 PGFSS---ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGR 411
PG + +P ++ ++ + +MDSMT+ E P+ + S+I RIARGSG
Sbjct: 351 PGMGGGIKDQLPDDAMDVTEERMHTFRVVMDSMTDAE--KEYPRAIGASQIERIARGSGT 408
Query: 412 QVREVMEMLEEYKRLAKIWSKMKGLKIPKK 441
V E+LE++K + + + +G+ K+
Sbjct: 409 SEESVRELLEQFKLMERTMKQFQGMGSEKE 438
>gi|433592885|ref|YP_007282381.1| signal recognition particle GTPase [Natrinema pellirubrum DSM
15624]
gi|448335331|ref|ZP_21524480.1| signal recognition particle protein Srp54 [Natrinema pellirubrum
DSM 15624]
gi|433307665|gb|AGB33477.1| signal recognition particle GTPase [Natrinema pellirubrum DSM
15624]
gi|445617570|gb|ELY71166.1| signal recognition particle protein Srp54 [Natrinema pellirubrum
DSM 15624]
Length = 463
Score = 301 bits (772), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 167/447 (37%), Positives = 264/447 (59%), Gaps = 15/447 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ + ++ + + E+ + E + EI R+LL ADV LV E+ +IK+
Sbjct: 1 MVLDDLGSSLRGTLDKLRGKSRLSEEDIEEIVKEIQRSLLSADVDVSLVMELSDSIKERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG R + + ++ EL ++ G + P + + I+ GLQGSGKTT+ K
Sbjct: 61 LEEEPPAGTPARDFVLRIVYEELVDLI--GDSTELPLEEQ--TILLAGLQGSGKTTSAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KG +PA++ DTFR GA+DQ ++ A +A++ FYG+ DPV IA +G+E +
Sbjct: 117 MAWWFSTKGLRPAVIQTDTFRPGAYDQAEEMAERAEVEFYGNPDSEDPVEIARKGLE--E 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
D+ IVDT+GRH E L +E+ Q+ E V PD + V+D++IGQ A +QAQ F +S
Sbjct: 175 TSEADVHIVDTAGRHALEDDLIDEIEQI-EGVVEPDTSLLVLDAAIGQGAKEQAQQFDES 233
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
+ + V++TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 234 IGIDGVVITKLDGTAKGGGALTAVDQTDSSIAFLGTGEEVQDIERFEPDGFISRLLGMGD 293
Query: 301 WSGFMDKIH---EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGF 357
S +++ E M++ + + +G FTL M +Q + + MGP+ QV M+PG
Sbjct: 294 LSQLAERVERAMEQTEMEEDDWDPEDMLQGQFTLNDMQKQMEAMNNMGPLDQVMDMIPGL 353
Query: 358 SS---ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVR 414
+ +P +Q +++ + +MDSMT+ E PK + S+I RIARGSG
Sbjct: 354 GGGIKDQLPDDAMDVTQERMRTFSVIMDSMTDAE--KEYPKAIGASQIQRIARGSGTSEE 411
Query: 415 EVMEMLEEYKRLAKIWSKMKGLKIPKK 441
+V E+L++YK + K + +G+ K+
Sbjct: 412 QVRELLQQYKMMEKTIKQFQGMGSEKE 438
>gi|336252741|ref|YP_004595848.1| Signal recognition 54 kDa protein [Halopiger xanaduensis SH-6]
gi|335336730|gb|AEH35969.1| Signal recognition 54 kDa protein [Halopiger xanaduensis SH-6]
Length = 464
Score = 301 bits (772), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 168/445 (37%), Positives = 263/445 (59%), Gaps = 21/445 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ + ++ + I E+ + E + EI R+L+ ADV LV+E+ NIK+
Sbjct: 1 MVLDDLGSSLRGTLDKLRGKSRISEEDVEEIVKEIQRSLISADVDISLVQELSGNIKERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG R + + ++ EL ++ G + P + + I+ GLQGSGKTT+ K
Sbjct: 61 LEEEPPAGTPARDFVLRIVYEELVDLI--GDSTELPLEEQ--TILLAGLQGSGKTTSAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KG +PA++ DTFR GA++Q ++ A +A++ +YG+ DPV IA +G+E +
Sbjct: 117 MAWWFSTKGLRPAVIQTDTFRPGAYEQAEEMAGRAEVDYYGNPDNDDPVEIARKGLE--E 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
D+ IVDT+GRH E L +E+ Q+ E V PD + V+D++IGQ A DQAQ F +S
Sbjct: 175 TSEADVHIVDTAGRHALEDDLIDEIEQI-EGVVEPDTSLLVLDAAIGQGAKDQAQQFDES 233
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
+ + V++TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 234 IGIDGVVITKLDGTAKGGGALTAVDQTDSSIAFLGTGEEVQDIERFEPDGFISRLLGMGD 293
Query: 301 WSGFMDKIH------EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSML 354
S +++ E D PE + +G FTL M +Q + + MGP+ QV M+
Sbjct: 294 LSQLAERVERAMLETETEEDDWDPE---DMLQGQFTLHDMQKQMEAMNNMGPLDQVMDMI 350
Query: 355 PGFSS---ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGR 411
PGF + +P +Q +++ + +MDSMT E + PK + S+I RIA+GSG
Sbjct: 351 PGFGGGIKDQLPDDAMDVTQERMRSFSVIMDSMT--EAEKEYPKAIGASQIERIAKGSGT 408
Query: 412 QVREVMEMLEEYKRLAKIWSKMKGL 436
+V E+L++YK + K + +G+
Sbjct: 409 SEDQVRELLQQYKMMEKTIKQFQGM 433
>gi|448347056|ref|ZP_21535935.1| signal recognition particle protein Srp54 [Natrinema altunense JCM
12890]
gi|445631393|gb|ELY84625.1| signal recognition particle protein Srp54 [Natrinema altunense JCM
12890]
Length = 464
Score = 301 bits (772), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 167/445 (37%), Positives = 262/445 (58%), Gaps = 21/445 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ + ++ + + E+ + E + EI R+LL ADV LV E+ NIK+
Sbjct: 1 MVLDDLGSSLRGTLDKLRGKSRLSEEDIEEIVKEIQRSLLSADVDVSLVMELSDNIKERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG R + + ++ EL ++ G + P + + I+ GLQGSGKTT+ K
Sbjct: 61 LEEEPPAGTPARDFVLRIVYEELVDLI--GDSTELPLEEQ--TILLAGLQGSGKTTSAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KG +PA++ DTFR GA+ Q ++ A +A++ FYG+ DPV IA +G+E +
Sbjct: 117 MAWWFSTKGLRPAVIQTDTFRPGAYQQAEEMAGRAEVDFYGNPDNDDPVEIARKGLE--E 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
+ D+ IVDT+GRH E L +E+ Q+ E V PD + V+D++IGQ A DQAQ F +S
Sbjct: 175 TSDADVHIVDTAGRHALEDDLIDEIEQI-EGVVEPDTSLLVLDAAIGQGAKDQAQQFDES 233
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
+ + V++TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 234 IGIDGVVITKLDGTAKGGGALTAVDQTDSSIAFLGTGEEVQDIERFEPDGFISRLLGMGD 293
Query: 301 WSGFMDKIH------EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSML 354
S +++ ++ D PE + +G FTL M +Q + + MGP+ QV M+
Sbjct: 294 LSQLAERVERAMEETDIEEDDWDPE---DMLQGQFTLNDMQKQMEAMNNMGPLDQVMDMI 350
Query: 355 PGFSS---ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGR 411
PG + +P +Q +++ + +MDSMT E + PK + S+I RIARGSG
Sbjct: 351 PGLGGGIKDQLPDDAMDVTQERMRTFTVIMDSMT--ETEKEYPKAIGASQIERIARGSGT 408
Query: 412 QVREVMEMLEEYKRLAKIWSKMKGL 436
+V E+L++YK + + + +G+
Sbjct: 409 DEEQVRELLQQYKMMERTMKQFQGM 433
>gi|145591970|ref|YP_001153972.1| GTP-binding signal recognition particle [Pyrobaculum arsenaticum
DSM 13514]
gi|158514165|sp|A4WLQ3.1|SRP54_PYRAR RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|145283738|gb|ABP51320.1| signal recognition particle subunit FFH/SRP54 (srp54) [Pyrobaculum
arsenaticum DSM 13514]
Length = 433
Score = 301 bits (771), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 169/425 (39%), Positives = 258/425 (60%), Gaps = 10/425 (2%)
Query: 11 SRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHN 70
S+ ++++ + IDE L E EI R LL+ADV LV+ N K + + AG
Sbjct: 9 SKLVEKIRDVEYIDEATLQEIAREIQRTLLKADVPLDLVKTFTDNAVKRIREEKPPAGIP 68
Query: 71 KRRIIQQAIFNELCKMLDPGKPS-FTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
R + ++ EL K++ +P+ F P K KP +++ +G++GSGKTTT K A Y K+G
Sbjct: 69 PREYLIYVLYEELVKLMGGEQPAEFKPTK-KPYIVLLLGVEGSGKTTTSAKLARYLMKRG 127
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
+K +V DT R AFDQL+Q A K PFYG D V IA GV K D++I+
Sbjct: 128 YKVGMVETDTIRPAAFDQLRQLAEKIGAPFYGERDGKDAVEIARRGVANLK--GVDVLII 185
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DT+GRH+ E AL +E++ + +A VNPD V+ V+D+++G+ A QA+AF + + + VI+T
Sbjct: 186 DTAGRHRNEEALLQEVKAIYDA-VNPDEVVLVVDATVGKLAAAQAEAFMKYLPIHTVIIT 244
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
KMD A+GGGAL+AVA T + V FIG GE ++E E F+ + FV+RLLGMGD ++KI
Sbjct: 245 KMDSTARGGGALAAVAKTGARVKFIGVGEDVEELEPFNPRKFVARLLGMGDLDALLEKIK 304
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
V ++ L+++ G L +Q +++K+GP+ +VF +LPG + + + + +
Sbjct: 305 AVFEEEEV---LEEIESGRLDLLTFKKQIDSLMKLGPLSKVFQLLPGGLAAKISEEQIEL 361
Query: 370 SQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLEEYKRLAKI 429
SQ +K++ ++ SMT EEL NP ++N SRI RIA G+G ++V EML Y+ L K+
Sbjct: 362 SQKNLKKWRAILSSMTMEEL--KNPDILNASRIRRIALGAGVTPKDVKEMLTVYENLKKM 419
Query: 430 WSKMK 434
+K
Sbjct: 420 SKTLK 424
>gi|357508655|ref|XP_003624616.1| Signal recognition particle 54 kDa protein [Medicago truncatula]
gi|355499631|gb|AES80834.1| Signal recognition particle 54 kDa protein [Medicago truncatula]
Length = 321
Score = 301 bits (771), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 174/336 (51%), Positives = 212/336 (63%), Gaps = 46/336 (13%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M LA LGG I R +MSN T+ID+++ C+NEITRA +Q+ ++ KL+R+M IK I+
Sbjct: 1 MGLADLGGRILRGFDKMSNETVIDKEIRKRCVNEITRAFIQSIIEPKLIRDMHAKIKNII 60
Query: 61 ----NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTT 116
NLDD A R++IQQ PS ++ + + GKTT
Sbjct: 61 YNHLNLDDFDAA---RKMIQQV----------------------PSCLLVLKV-CCGKTT 94
Query: 117 TCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGV 176
TC ++A ++QKKG K LVC DT R GAFDQLKQ + IP YG R E
Sbjct: 95 TCAQFANHYQKKGLKTGLVCTDTLRNGAFDQLKQIYAETNIPCYGRVGYCQNCR---ERC 151
Query: 177 ETFKKENCDLIIVDTSGRHKQEA-ALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFD--- 232
+ NCDLIIVD SG HKQE AL EE+ QVS+AT PDLVI V+D +IGQ AFD
Sbjct: 152 GQMQGGNCDLIIVDVSGGHKQEEDALIEEIHQVSKAT-KPDLVILVIDGNIGQHAFDHRS 210
Query: 233 --QAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKP 290
QA AF QSV +GAVIV+KMDG+A GGG+LSAVAATKS VIFIGTGEHMDEFEVF+VKP
Sbjct: 211 LKQATAFTQSVDIGAVIVSKMDGYAMGGGSLSAVAATKSSVIFIGTGEHMDEFEVFEVKP 270
Query: 291 FVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSE 326
FVS LLGM DW F+D+++EV PEL L E
Sbjct: 271 FVSSLLGMDDWYEFIDRVYEV------PELPLNLPE 300
>gi|448337308|ref|ZP_21526388.1| signal recognition particle protein Srp54 [Natrinema pallidum DSM
3751]
gi|445625973|gb|ELY79324.1| signal recognition particle protein Srp54 [Natrinema pallidum DSM
3751]
Length = 463
Score = 301 bits (771), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 167/445 (37%), Positives = 261/445 (58%), Gaps = 21/445 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ + ++ + + E+ + E + EI R+LL ADV LV E+ NIK+
Sbjct: 1 MVLDDLGSSLRGTLDKLRGKSRLSEEDIEEIVKEIQRSLLSADVDVSLVMELSDNIKERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG R + + ++ EL ++ G + P + + I+ GLQGSGKTT+ K
Sbjct: 61 LEEEPPAGTPARDFVLRIVYEELVDLI--GDSTELPLEEQ--TILLAGLQGSGKTTSAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KG +PA++ DTFR GA+ Q ++ A +A++ FYG+ DPV IA G+E +
Sbjct: 117 MAWWFSTKGLRPAVIQTDTFRPGAYQQAEEMAGRAEVDFYGNPDNDDPVEIARTGLE--E 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
+ D+ IVDT+GRH E L +E+ Q+ E V PD + V+D++IGQ A DQAQ F +S
Sbjct: 175 TSDADVHIVDTAGRHALEEDLIDEIEQI-EGVVEPDTSLLVLDAAIGQGAKDQAQQFDES 233
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
+ + V++TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 234 IGIDGVVITKLDGTAKGGGALTAVDQTDSSIAFLGTGEEVQDIERFEPDGFISRLLGMGD 293
Query: 301 WSGFMDKIH------EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSML 354
S +++ ++ D PE + +G FTL M +Q + + MGP+ QV M+
Sbjct: 294 LSQLAERVERAMEETDIEEDDWDPE---DMLQGQFTLNDMQKQMEAMNNMGPLDQVMDMI 350
Query: 355 PGFSS---ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGR 411
PG + +P +Q +++ + +MDSMT E + PK + S+I RIARGSG
Sbjct: 351 PGLGGGIKDQLPDDAMDVTQERMRTFTVIMDSMT--ETEKEYPKAIGASQIERIARGSGT 408
Query: 412 QVREVMEMLEEYKRLAKIWSKMKGL 436
+V E+L++YK + + + +G+
Sbjct: 409 DEEQVRELLQQYKMMERTMKQFQGM 433
>gi|448450371|ref|ZP_21592270.1| signal recognition particle protein Srp54 [Halorubrum litoreum JCM
13561]
gi|445812223|gb|EMA62219.1| signal recognition particle protein Srp54 [Halorubrum litoreum JCM
13561]
Length = 463
Score = 301 bits (771), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 166/445 (37%), Positives = 264/445 (59%), Gaps = 21/445 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ ++ ++ + + E + E + EI R+LL ADV LV E+ +IK
Sbjct: 1 MVLDDLGTSLRSSLDKLQGKSRLSESDVEEIVKEIQRSLLSADVDVSLVMELSDSIKSRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ G + + + ++ E+ +++ G + P + + I+ GLQGSGKTT+ K
Sbjct: 61 LEEEPPGGTTAKDHVLKIVYEEMVELV--GDSTELPLENQ--TILLAGLQGSGKTTSAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KKG +PA++ DTFR GA+DQ KQ +A++ FYG+ DPV IA G+E +
Sbjct: 117 MAWWFSKKGLRPAVIQTDTFRPGAYDQAKQMCERAEVDFYGNPDNDDPVDIARTGLE--E 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
+ D+ IVDT+GRH E L E+ ++ E V+PD + V+D++IGQ A DQA+ F++S
Sbjct: 175 TADADVHIVDTAGRHALEDDLIAEIEEI-EGVVDPDRSLLVLDAAIGQGAKDQARQFEKS 233
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
+ + V++TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 234 IGIEGVVITKLDGTAKGGGALTAVNETDSSIAFLGTGETVQDIERFEPSGFISRLLGMGD 293
Query: 301 WSGFMDKIHEVVPMDQQ------PELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSML 354
+++ + Q+ PE + +G FTL+ M Q + KMGP+ QV M+
Sbjct: 294 LKQLSERVERAMQETQEEDGDWDPE---DMLQGEFTLKDMKRQMDAMNKMGPLDQVMDMI 350
Query: 355 PGFSSELM---PKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGR 411
PG +M P +Q +++R+ +MDSMT EEL+ NP+++ SR+ RIARGSG
Sbjct: 351 PGLGGGMMDELPDDAMDVTQDRMRRFERIMDSMTEEELE--NPRVVGQSRVERIARGSGT 408
Query: 412 QVREVMEMLEEYKRLAKIWSKMKGL 436
V ++LE++ + + + +G+
Sbjct: 409 DEETVQQLLEQHSMMEETIGQFQGM 433
>gi|448312267|ref|ZP_21502014.1| signal recognition particle protein Srp54 [Natronolimnobius
innermongolicus JCM 12255]
gi|445601867|gb|ELY55848.1| signal recognition particle protein Srp54 [Natronolimnobius
innermongolicus JCM 12255]
Length = 465
Score = 301 bits (771), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 170/450 (37%), Positives = 263/450 (58%), Gaps = 21/450 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ + ++ + I E+ + E + EI R+LL ADV LV E+ NIK+
Sbjct: 1 MVLDDLGSSLRGTLDKLRGKSRISEEDIEEIVKEIQRSLLSADVDVSLVMELSDNIKERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG R + + ++ EL ++ G + P + + I+ GLQGSGKTT+ K
Sbjct: 61 LEEEPPAGTPARDFVLRIVYEELVGLI--GDSTELPLEEQ--TILLAGLQGSGKTTSSAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KG +PA++ DTFR GA+ Q K+ +A++ FYG+ DPV IA G+E +
Sbjct: 117 MAWWFSTKGLRPAVIQTDTFRPGAYQQAKEMCERAEVDFYGNPDNDDPVEIARNGLE--E 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
+ D+ IVDT+GRH E L +E+ + E V PD + V+D++IGQ A DQAQ F +S
Sbjct: 175 TSDADVHIVDTAGRHALEDDLIDEIEDI-EGVVQPDTSLLVLDAAIGQGAKDQAQQFDES 233
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
+ + V++TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 234 IGIDGVVITKIDGTAKGGGALTAVDQTDSSIAFLGTGEEVQDIERFEPDGFISRLLGMGD 293
Query: 301 WSGFMDKIH------EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSML 354
+++ +V D PE + +G+FTL M +Q + + MGP+ QV M+
Sbjct: 294 LGQLAERVERAMEQTQVEEDDWDPE---DMLQGSFTLHDMQKQMEAMNNMGPLDQVMDMI 350
Query: 355 PGFSS---ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGR 411
PGF + +P +Q +++++ +MDSMT E + PK + S+I RIARGSG
Sbjct: 351 PGFGGGIKDQLPDDAMDVTQDRMRKFSVIMDSMT--EAEKEYPKAIGASQIERIARGSGT 408
Query: 412 QVREVMEMLEEYKRLAKIWSKMKGLKIPKK 441
+V E+L++YK + K + +G+ K+
Sbjct: 409 SEEDVRELLQQYKMMEKTIKQFQGMGSDKE 438
>gi|397772073|ref|YP_006539619.1| GTP-binding signal recognition particle SRP54 G- domain protein
[Natrinema sp. J7-2]
gi|448342497|ref|ZP_21531447.1| signal recognition particle protein Srp54 [Natrinema gari JCM
14663]
gi|397681166|gb|AFO55543.1| GTP-binding signal recognition particle SRP54 G- domain protein
[Natrinema sp. J7-2]
gi|445625512|gb|ELY78869.1| signal recognition particle protein Srp54 [Natrinema gari JCM
14663]
Length = 464
Score = 301 bits (771), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 167/445 (37%), Positives = 261/445 (58%), Gaps = 21/445 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ + ++ + + E+ + E + EI R+LL ADV LV E+ NIK
Sbjct: 1 MVLDDLGSSLRGTLDKLRGKSRLSEEDIEEIVKEIQRSLLSADVDVSLVMELSDNIKDRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG R + + ++ EL ++ G + P + + I+ GLQGSGKTT+ K
Sbjct: 61 LEEEPPAGTPARDFVLRIVYEELVDLI--GDSTELPLEEQ--TILLAGLQGSGKTTSAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KG +PA++ DTFR GA+ Q ++ A +A++ FYG+ DPV IA +G+E +
Sbjct: 117 MAWWFSTKGLRPAVIQTDTFRPGAYQQAEEMAGRAEVDFYGNPDNDDPVEIARKGLE--E 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
+ D+ IVDT+GRH E L +E+ Q+ E V PD + V+D++IGQ A DQAQ F +S
Sbjct: 175 TSDADVHIVDTAGRHALEEDLIDEIEQI-EGVVEPDTSLLVLDAAIGQGAKDQAQQFDES 233
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
+ + V++TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 234 IGIDGVVITKLDGTAKGGGALTAVDQTDSSIAFLGTGEEVQDIERFEPDGFISRLLGMGD 293
Query: 301 WSGFMDKIH------EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSML 354
S +++ ++ D PE + +G FTL M +Q + + MGP+ QV M+
Sbjct: 294 LSQLAERVERAMEETDIEEDDWDPE---DMLQGQFTLNDMQKQMEAMNNMGPLDQVMDMI 350
Query: 355 PGFSS---ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGR 411
PG + +P +Q +++ + +MDSMT E + PK + S+I RIARGSG
Sbjct: 351 PGLGGGIKDQLPDDAMDVTQERMRTFTVIMDSMT--EAEKEYPKAIGASQIERIARGSGT 408
Query: 412 QVREVMEMLEEYKRLAKIWSKMKGL 436
+V E+L++YK + + + +G+
Sbjct: 409 DEEQVRELLQQYKMMERTMKQFQGM 433
>gi|335441201|ref|ZP_08561922.1| signal recognition particle protein Srp54 [Halorhabdus tiamatea
SARL4B]
gi|334888372|gb|EGM26671.1| signal recognition particle protein Srp54 [Halorhabdus tiamatea
SARL4B]
Length = 465
Score = 301 bits (770), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 164/442 (37%), Positives = 269/442 (60%), Gaps = 15/442 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ A+ + + I E+ + + EI R+LLQADV LV ++ +I+
Sbjct: 1 MVLDDLGSSLRGALDGLRGKSRISEEDVQAVVKEIQRSLLQADVDVDLVMDLSDSIETRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG + R + + ++ EL +++ G+ + P + P I+ GLQGSGKTT+ K
Sbjct: 61 LEEEPPAGTSARDWVLRIVYEELVELV--GESTELPLE--PQTIVLAGLQGSGKTTSAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KKG +PA++ DT+R GA++Q ++ A +A++ FYG E D V+IA EG+E
Sbjct: 117 IAWWFSKKGLRPAVIQTDTWRPGAYEQAEEMAERAEVDFYGDPDEDDAVKIAREGLEATA 176
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
+ D+ IVDT+GRH E L +E+ + E+ +PD + V+D++IGQ A +QA F+ +
Sbjct: 177 --DADVQIVDTAGRHALEDGLIDELEDI-ESVADPDHNLLVLDAAIGQEAKEQASRFEGA 233
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V + V++TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 234 VGIDGVVITKLDGTAKGGGALAAVNETDSTIAFLGTGETVKDVERFEPSGFISRLLGMGD 293
Query: 301 WSGFMDKIHEVVPMDQQPE---LLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGF 357
+++ + Q+ E + + +G FTL+ M +Q + + KMGP+ QV M+PG
Sbjct: 294 LKQLTERVERAMEETQEEEGDWGPEDMLDGEFTLKDMRKQMEAMNKMGPLDQVMDMIPGL 353
Query: 358 SSELM---PKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVR 414
+M P +Q +++ + +MDSMT++EL+ NP+ + SR RIARGSG+
Sbjct: 354 GGGMMDQLPDDAMDVTQERMRDFEVIMDSMTDDELE--NPRQIGRSRTERIARGSGKPEE 411
Query: 415 EVMEMLEEYKRLAKIWSKMKGL 436
+ E+LE++K + + ++ +G+
Sbjct: 412 RIRELLEQHKMMDRTLNQFQGM 433
>gi|448308178|ref|ZP_21498058.1| signal recognition particle protein Srp54 [Natronorubrum bangense
JCM 10635]
gi|445594431|gb|ELY48589.1| signal recognition particle protein Srp54 [Natronorubrum bangense
JCM 10635]
Length = 463
Score = 301 bits (770), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 169/445 (37%), Positives = 263/445 (59%), Gaps = 21/445 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ + ++ + I E+ + E + EI R+LL ADV LV E+ NIK+
Sbjct: 1 MVLDDLGSSLRGTLDKLRGKSRISEEDIEEIVKEIQRSLLSADVDVSLVMELSDNIKERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG R + + ++ EL ++ G+ + P + + I+ GLQGSGKTT+ K
Sbjct: 61 LEEEPPAGTPARDFVLRIVYEELVGLI--GESTELPLEEQ--TILLAGLQGSGKTTSAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KG +PA++ DTFR GA++Q +Q A +A++ +YG+ DPV IA +G+E +
Sbjct: 117 MAWWFSTKGLRPAVIQTDTFRPGAYEQAQQMAGRAEVDYYGNPDSEDPVEIARKGLE--E 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
D+ IVDT+GRH E L +E+ Q+ E V PD + V+D++IGQ A +QA F +S
Sbjct: 175 TSEADVHIVDTAGRHALEDDLIDEIEQI-EGVVEPDTSLLVLDAAIGQGAKEQASQFDES 233
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
+ + V++TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 234 IGIDGVVITKLDGTAKGGGALTAVDQTDSSIAFLGTGEEVQDIERFEPDGFISRLLGMGD 293
Query: 301 WSGFMDKIH------EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSML 354
+++ +V D +PE + +G FTL M +Q + + MGP+ QV M+
Sbjct: 294 LGQLAERVERAMEQTQVEDDDWEPE---DMLQGQFTLNDMQKQMEAMNNMGPLDQVMDMI 350
Query: 355 PGFSS---ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGR 411
PGF + +P +Q +++ + +MDSMT+ E PK + S+I RIARGSG
Sbjct: 351 PGFGGGIKDQLPDDAMDVTQDRMRTFSVIMDSMTDTE--KEYPKAIGASQIERIARGSGT 408
Query: 412 QVREVMEMLEEYKRLAKIWSKMKGL 436
+V E+LE+YK + K + +G+
Sbjct: 409 SEEKVRELLEQYKMMEKTIKQFQGM 433
>gi|448302117|ref|ZP_21492101.1| signal recognition particle protein Srp54 [Natronorubrum tibetense
GA33]
gi|445582113|gb|ELY36458.1| signal recognition particle protein Srp54 [Natronorubrum tibetense
GA33]
Length = 465
Score = 300 bits (769), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 167/447 (37%), Positives = 264/447 (59%), Gaps = 15/447 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ + ++ + + E+ + E + EI R+LL ADV LV E+ NIK+
Sbjct: 1 MVLDDLGSSLRGTLDKLRGKSRLSEEDIEEIVKEIQRSLLSADVDVSLVMELSDNIKERS 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG R + + ++ EL ++ G+ + P + + I+ GLQGSGKTT+ K
Sbjct: 61 LEEEPPAGTPARDFVLRIVYEELVDLI--GESTELPLEEQ--TILLAGLQGSGKTTSAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KG +PA++ DTFR GA++Q ++ A +A++ +YG+ DPV IA +G+E +
Sbjct: 117 MAWWFSTKGLRPAVIQTDTFRPGAYEQAEEMAGRAEVDYYGNPDSEDPVEIARKGLE--E 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
D+ IVDT+GRH E L +E+ Q+ E V PD + V+D++IGQ A DQAQ F +S
Sbjct: 175 TSEADVHIVDTAGRHALEEDLIDEIEQI-EGVVEPDTSLLVLDAAIGQGAKDQAQQFDES 233
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
+ + V++TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 234 IGIDGVVITKLDGTAKGGGALTAVDQTDSSIAFLGTGEEVQDIERFEPDGFISRLLGMGD 293
Query: 301 WSGFMDKIH---EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGF 357
+++ E M++ + + +G FTL M +Q + + MGP+ QV M+PGF
Sbjct: 294 LGQLAERVERAMEQTEMEEDDWDPEDMLQGQFTLNDMQKQMEAMNNMGPLDQVMDMIPGF 353
Query: 358 SS---ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVR 414
+ +P +Q ++ + +MDSMT E + PK + S+I RIARGSG +
Sbjct: 354 GGGIKDQLPDDAMDVTQERMHTFSVIMDSMT--EAEKEYPKAIGASQIERIARGSGTEEE 411
Query: 415 EVMEMLEEYKRLAKIWSKMKGLKIPKK 441
V E+L++YK + K + +G+ K+
Sbjct: 412 NVRELLQQYKMMEKTIKQFQGMGSEKE 438
>gi|435845547|ref|YP_007307797.1| signal recognition particle GTPase [Natronococcus occultus SP4]
gi|433671815|gb|AGB36007.1| signal recognition particle GTPase [Natronococcus occultus SP4]
Length = 464
Score = 300 bits (769), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 171/450 (38%), Positives = 263/450 (58%), Gaps = 21/450 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ + ++ + I E + E + EI R+LL ADV LV E+ +I++
Sbjct: 1 MVLDDLGTSLRGTLDKLRGKSRISEDDIEEIVKEIQRSLLSADVDVSLVMELSDSIEERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG R + + ++ EL ++ G+ + P + + I+ GLQGSGKTT+ K
Sbjct: 61 LEEEPPAGTPARDFVLRIVYEELVDLI--GESTDLPLEEQ--TILLAGLQGSGKTTSAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KG +PA+V DTFR GA+DQ K+ +A++ FYG+ DPV IA G+E +
Sbjct: 117 MAWWFSTKGLRPAVVQTDTFRPGAYDQAKEMCERAEVDFYGNPDADDPVEIARNGLE--E 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
D+ IVDT+GRH E L +E+ Q+ +A V PD + V+D++IGQ A DQAQ F +S
Sbjct: 175 TSEADVHIVDTAGRHALEDDLIDEIEQIEDA-VEPDKSLLVLDAAIGQGAKDQAQQFDES 233
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
+ + V++TK+DG AKGGGAL+AV T+S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 234 IGIDGVVITKLDGTAKGGGALTAVDQTESSIAFLGTGEEVQDIERFEPDGFISRLLGMGD 293
Query: 301 WSGFMDKIH------EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSML 354
+++ +V + PE + G FTL M +Q + + MGP+ QV M+
Sbjct: 294 LGQLAERVERAMQQTDVEEEEWDPE---DMLTGQFTLNDMQKQMEAMNNMGPLDQVMDMI 350
Query: 355 PGFSS---ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGR 411
PGF + +P +Q +++ Y +MDSMT E + PK + S+I RIARGSG
Sbjct: 351 PGFGGGIKDQLPDDAMDVTQERMRAYSVIMDSMT--ETEKEYPKAIGASQIERIARGSGT 408
Query: 412 QVREVMEMLEEYKRLAKIWSKMKGLKIPKK 441
+V E+LE+YK + + + +G+ K+
Sbjct: 409 SEDQVRELLEQYKMMERTIKQFQGMGSDKE 438
>gi|379003325|ref|YP_005258997.1| Signal recognition particle GTPase [Pyrobaculum oguniense TE7]
gi|375158778|gb|AFA38390.1| Signal recognition particle GTPase [Pyrobaculum oguniense TE7]
Length = 433
Score = 300 bits (769), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 170/425 (40%), Positives = 256/425 (60%), Gaps = 10/425 (2%)
Query: 11 SRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHN 70
S+ + ++ IDE L E EI R LL+ADV LV+ N K + + AG
Sbjct: 9 SKLVDKIRGVEYIDEATLQEIAREIQRTLLKADVPLDLVKTFTDNAVKRIREEKPPAGIP 68
Query: 71 KRRIIQQAIFNELCKMLDPGKPS-FTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
R + ++ EL K++ +P+ F P K KP +++ +G++GSGKTTT K A Y K+G
Sbjct: 69 PREYLIYVLYEELVKLMGGEQPAEFKPTK-KPYIVLLLGVEGSGKTTTSAKLARYLMKRG 127
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
+K +V DT R AFDQLKQ A K PFYG D V IA GV K D++I+
Sbjct: 128 YKVGMVETDTIRPAAFDQLKQLAEKIGAPFYGERDGKDAVEIARRGVTNLK--GVDVLII 185
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DT+GRH+ E AL +E++ + +A VNPD V+ V+D+++G+ A QA+AF + + + VI+T
Sbjct: 186 DTAGRHRNEEALLQEVKAIYDA-VNPDEVVLVVDATVGKLAAAQAEAFMKYLPIHTVIIT 244
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
KMD A+GGGAL+AVA T + V FIG GE ++E E F+ + FV+RLLGMGD ++KI
Sbjct: 245 KMDSTARGGGALAAVAKTGARVKFIGVGEDVEELEPFNPRKFVARLLGMGDLDALLEKIK 304
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
V ++ L+++ G L +Q +++K+GP+ +VF +LPG + + + + +
Sbjct: 305 AVFEEEEV---LEEIESGRLDLLTFKKQIDSLMKLGPLSKVFQLLPGGLAAKISEEQIEL 361
Query: 370 SQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLEEYKRLAKI 429
SQ +K++ ++ SMT EEL NP ++N SRI RIA G+G ++V EML Y+ L K+
Sbjct: 362 SQKNLKKWRAILSSMTMEEL--KNPDILNASRIRRIALGAGVTPKDVKEMLTVYENLKKM 419
Query: 430 WSKMK 434
+K
Sbjct: 420 SKTLK 424
>gi|448456638|ref|ZP_21595345.1| signal recognition particle protein Srp54 [Halorubrum lipolyticum
DSM 21995]
gi|445811783|gb|EMA61785.1| signal recognition particle protein Srp54 [Halorubrum lipolyticum
DSM 21995]
Length = 464
Score = 300 bits (769), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 165/442 (37%), Positives = 264/442 (59%), Gaps = 15/442 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ ++ ++ + + E + E + EI R+LL ADV LV E+ +IK
Sbjct: 1 MVLDDLGTSLRSSLDKLQGKSRLSESDVEEIVKEIQRSLLSADVDVSLVMELSDSIKSRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ G + + + ++ E+ +++ G + P + + I+ GLQGSGKTT+ K
Sbjct: 61 LEEEPPGGTTAKDHVLRIVYEEMVELV--GDSTELPLENQ--TILLAGLQGSGKTTSAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KKG +PA++ DTFR GA+DQ KQ +A++ FYG DPV IA EG+E
Sbjct: 117 MAWWFSKKGLRPAVIQTDTFRPGAYDQAKQMCERAEVDFYGDPDNDDPVAIAREGLEA-- 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
E+ D+ IVDT+GRH E L E+ ++ E+ V+PD + V+D++IGQ A +QA+ F+ S
Sbjct: 175 TEDADVHIVDTAGRHALEDDLIAEIEEI-ESVVDPDRSLLVLDAAIGQGAKEQARQFEAS 233
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
+ + V++TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 234 IGIEGVMITKLDGTAKGGGALTAVNETDSSIAFLGTGETVQDIERFEPSGFISRLLGMGD 293
Query: 301 WSGFMDKIHEVVPMDQ---QPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGF 357
+++ + Q + + + +G FTL+ M +Q + +MGP+ QV M+PG
Sbjct: 294 LKQLSERVERAMQETQEEDEDWDPEDMLQGEFTLKDMKKQMDAMNRMGPLDQVMDMIPGL 353
Query: 358 SSELM---PKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVR 414
+M P +Q +++R+ +MDSMT EEL +NP+++ SR RIARGSG
Sbjct: 354 GGGMMDQLPDDAMDVTQDRMRRFERIMDSMTEEEL--TNPRVVGQSRTERIARGSGTDEE 411
Query: 415 EVMEMLEEYKRLAKIWSKMKGL 436
V ++LE++ + + S+ +G+
Sbjct: 412 TVRQLLEQHSMMEQTISQFQGM 433
>gi|448488716|ref|ZP_21607390.1| signal recognition particle protein Srp54 [Halorubrum
californiensis DSM 19288]
gi|445695664|gb|ELZ47765.1| signal recognition particle protein Srp54 [Halorubrum
californiensis DSM 19288]
Length = 463
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 165/442 (37%), Positives = 262/442 (59%), Gaps = 15/442 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ ++ ++ + + E + E + EI R+LL ADV LV E+ +IK
Sbjct: 1 MVLDDLGTSLRSSLDKLQGKSRLSESDVEEIVKEIQRSLLSADVDVSLVMELSDSIKSRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ G + + + ++ E+ +++ G + P + + I+ GLQGSGKTT+ K
Sbjct: 61 LEEEPPGGTTAKDHVLKIVYEEMVELV--GDSTELPLENQ--TILLAGLQGSGKTTSAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KKG +PA++ DTFR GA+DQ KQ +A++ FYG+ DPV IA G+E
Sbjct: 117 MAWWFSKKGLRPAVIQTDTFRPGAYDQAKQMCERAEVDFYGNPDNDDPVDIARTGLEA-- 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
E+ D+ IVDT+GRH E L E+ ++ E V+PD + V+D++IGQ A DQA+ F++S
Sbjct: 175 TEDADVHIVDTAGRHALEDDLIAEIEEI-EGVVDPDRSLLVLDAAIGQGAKDQARQFEKS 233
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
+ + V++TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 234 IGIEGVVITKLDGTAKGGGALTAVNETDSSIAFLGTGETVQDIERFEPSGFISRLLGMGD 293
Query: 301 WSGFMDKIHEVVPMDQ---QPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGF 357
+++ + Q + + + +G FTL+ M Q + KMGP+ QV M+PG
Sbjct: 294 LKQLSERVERAMQETQEEDEDWDPEDMLQGEFTLKDMKRQMDAMNKMGPLDQVMDMIPGL 353
Query: 358 SSELM---PKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVR 414
+M P +Q +++R+ +MDSMT EEL+ NP+++ SR RIARGSG
Sbjct: 354 GGGMMDELPDDAMDVTQDRMRRFERIMDSMTEEELE--NPRVVGQSRTRRIARGSGTDEE 411
Query: 415 EVMEMLEEYKRLAKIWSKMKGL 436
V ++LE++ + + + +G+
Sbjct: 412 TVQQLLEQHSMMEETIGQFQGM 433
>gi|14601593|ref|NP_148133.1| signal recognition 54 kDa protein [Aeropyrum pernix K1]
gi|12230645|sp|Q9YB62.1|SRP54_AERPE RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|5105423|dbj|BAA80736.1| signal recognition 54 kDa protein [Aeropyrum pernix K1]
Length = 441
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 167/429 (38%), Positives = 260/429 (60%), Gaps = 9/429 (2%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
+ RA+ + + EK ++ + ++ R L++ADV KLV + IK+ ++ G
Sbjct: 5 VRRAVAKFLRGGGVYEKAVDAFVKDLQRELIKADVNVKLVLNVTRRIKERALKEEPPPGV 64
Query: 70 NKRRIIQQAIFNELCKMLDPGK-PSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKK 128
+R + + ++ EL K+ + P P K P +++ VG+QGSGKTTT K AYY+ ++
Sbjct: 65 TRRDWMIKIVYEELVKLFGGDQEPQVDPPK-TPWIVLLVGVQGSGKTTTAGKLAYYYVRR 123
Query: 129 GWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLII 188
G+K LV +DT R GA++QLK+ A +A FYG E DP IA G+E +++I
Sbjct: 124 GYKVGLVSSDTHRPGAYEQLKRLAEEAGAMFYGE-REGDPAEIARRGLEDLLSRGAEIVI 182
Query: 189 VDTSGRHK--QEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAV 246
VDT+GRH +EA L +EM+ ++ + V PD V V+D+SIGQ A A+ F +S +G++
Sbjct: 183 VDTAGRHGHGEEARLLDEMKAIA-SKVRPDEVALVIDASIGQKAMGLAERFHKSTPIGSI 241
Query: 247 IVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMD 306
IVTKMDG A+GGGAL+A A T + + FIGTGE + E E F + FV+R+LGMGD ++
Sbjct: 242 IVTKMDGTARGGGALTAAAVTGARIKFIGTGETLGELEPFAPRRFVARILGMGDLESLLE 301
Query: 307 KIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSS-ELMPKG 365
+I + + + + +G T+R +Y Q + + K+GP+G+V MLPG S + +G
Sbjct: 302 RIKSLEEAGELDRAAEDVLKGRITMRTIYRQLRAMRKLGPLGKVLQMLPGASMLASIDEG 361
Query: 366 REKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLEEYKR 425
K + K+KR+M +++SMT EELD P++++ R+ RIA GSG V +V E+L YK
Sbjct: 362 ALKLGEEKMKRWMAIIESMTYEELD--RPEIIDKRRMRRIAIGSGTSVDDVRELLVYYKN 419
Query: 426 LAKIWSKMK 434
L + K+K
Sbjct: 420 LKTMMKKLK 428
>gi|300709660|ref|YP_003735474.1| signal recognition 54 kDa protein [Halalkalicoccus jeotgali B3]
gi|448297569|ref|ZP_21487615.1| signal recognition particle protein Srp54 [Halalkalicoccus jeotgali
B3]
gi|299123343|gb|ADJ13682.1| signal recognition 54 kDa protein [Halalkalicoccus jeotgali B3]
gi|445579878|gb|ELY34271.1| signal recognition particle protein Srp54 [Halalkalicoccus jeotgali
B3]
Length = 462
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 168/442 (38%), Positives = 260/442 (58%), Gaps = 15/442 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ ++++ + + E+ + + EI R+LLQADV LV E+ +IK
Sbjct: 1 MVLDDLGTSLRGTLEELRGKSRLTEEDVQAVVKEIQRSLLQADVDVSLVMELSDSIKTRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ G R + + ++ EL ++ G + P + IM GLQGSGKTTT K
Sbjct: 61 LEEEPPGGTTARDHVLRIVYEELVALV--GDSTELPLE--EQTIMLAGLQGSGKTTTAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KKG +PA++ DTFR GA+DQ KQ +A++ FYG DPV IA G+E +
Sbjct: 117 MAWWFSKKGLRPAVIQTDTFRPGAYDQAKQMCERAEVEFYGDPDAEDPVEIARRGME--E 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
+ D+ IVDT+GRH E L +E+ + EA V PD + V+D++IGQ A +QA+ F++S
Sbjct: 175 TADADVHIVDTAGRHALEDELIKEIEAIGEA-VEPDRSLLVLDAAIGQGAKEQARRFEES 233
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
+ + V +TK+DG AKGGGAL+AV T S + F+GTGE +D+ E F+ F+SRLLGMGD
Sbjct: 234 IGIQGVAITKLDGTAKGGGALTAVNETDSTIAFLGTGEEVDDIERFEPNGFISRLLGMGD 293
Query: 301 WSGFMDKIHEVVPMDQ---QPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGF 357
+++ + Q + + L G FTL M +Q + +MGP+ Q+ M+PG
Sbjct: 294 LKQLTERVERAMAETQEEEEDWDPEDLLSGTFTLHDMRKQMNAMNRMGPLDQIMDMIPGL 353
Query: 358 SSELM---PKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVR 414
LM P +Q +++R+ +MDSMT+ EL+ +P+ + S+I RIARGSG
Sbjct: 354 GGGLMDQLPDDAMDVTQDRLRRFEFVMDSMTDAELE--HPRAIGQSQIERIARGSGTDEE 411
Query: 415 EVMEMLEEYKRLAKIWSKMKGL 436
V E+L+++K + + + +G+
Sbjct: 412 TVRELLQQHKMMERTLKQFQGM 433
>gi|448531082|ref|ZP_21620916.1| signal recognition particle protein Srp54 [Halorubrum hochstenium
ATCC 700873]
gi|445707522|gb|ELZ59376.1| signal recognition particle protein Srp54 [Halorubrum hochstenium
ATCC 700873]
Length = 464
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 166/442 (37%), Positives = 261/442 (59%), Gaps = 15/442 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ ++ ++ T + E + E + EI R+LL ADV LV E+ +IK
Sbjct: 1 MVLDDLGTSLRSSLDKLQGKTRLSESDVEEMVKEIQRSLLSADVDVSLVMELSDSIKSRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ G R + + ++ E+ ++ G + P + + I+ GLQGSGKTT+ K
Sbjct: 61 LEEEPPGGTTARDHVLRIVYEEMVDLV--GDSTELPLENQ--TILLAGLQGSGKTTSAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KKG +PA++ DTFR GA+DQ KQ +A++ FYG+ DPV IA G+E +
Sbjct: 117 MAWWFSKKGLRPAVIQTDTFRPGAYDQAKQMCERAEVEFYGNPDNDDPVDIARTGLE--E 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
E+ D+ IVDT+GRH E L E+ ++ E V+PD + V+D++IGQ A +QA+ F+ S
Sbjct: 175 TEDADVHIVDTAGRHALEDDLIAEIEEI-EGVVDPDRSLLVLDAAIGQGAKEQARQFEAS 233
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
+ + V++TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 234 IGIEGVMITKLDGTAKGGGALTAVNETDSSIAFLGTGETVQDIERFEPSGFISRLLGMGD 293
Query: 301 WSGFMDKIHEVVPMDQ---QPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGF 357
+++ + Q + + +G FTL+ M Q + KMGP+ QV M+PG
Sbjct: 294 LKQLSERVERAMQETQEEDDDWDPEDMLKGEFTLKDMKRQMDAMNKMGPLDQVMDMIPGL 353
Query: 358 SSELM---PKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVR 414
+M P +Q +++R+ +MDSMT EEL+ NP+++ SR+ RIARGSG
Sbjct: 354 GGGMMDELPDDAMDVTQDRMRRFERIMDSMTEEELE--NPRVVGQSRVERIARGSGTDEE 411
Query: 415 EVMEMLEEYKRLAKIWSKMKGL 436
V ++LE++ + + + +G+
Sbjct: 412 TVQQLLEQHSMMEETIGQFQGM 433
>gi|39654777|pdb|1QZW|A Chain A, Crystal Structure Of The Complete Core Of Archaeal Srp And
Implications For Inter-Domain Communication
gi|39654779|pdb|1QZW|C Chain C, Crystal Structure Of The Complete Core Of Archaeal Srp And
Implications For Inter-Domain Communication
gi|39654781|pdb|1QZW|E Chain E, Crystal Structure Of The Complete Core Of Archaeal Srp And
Implications For Inter-Domain Communication
gi|39654783|pdb|1QZW|G Chain G, Crystal Structure Of The Complete Core Of Archaeal Srp And
Implications For Inter-Domain Communication
gi|39654785|pdb|1QZX|A Chain A, Crystal Structure Of The Complete Core Of Archaeal Srp And
Implications For Inter-Domain Communication
gi|39654786|pdb|1QZX|B Chain B, Crystal Structure Of The Complete Core Of Archaeal Srp And
Implications For Inter-Domain Communication
Length = 440
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 165/410 (40%), Positives = 254/410 (61%), Gaps = 13/410 (3%)
Query: 9 SISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAG 68
+I A+++ + EK ++E + ++ ++L+ +DV KLV + IK+ +N + +
Sbjct: 12 NIRDAVRKFLTGSTPYEKAVDEFIKDLQKSLISSDVNVKLVFSLTAKIKERLNKEKPPSV 71
Query: 69 HNKRRIIQQAIFNELCKMLDPGK-PSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQK 127
++ +++EL K+ K P+ P K P +IM VG+QGSGKTTT K AY+++K
Sbjct: 72 LERKEWFISIVYDELSKLFGGDKEPNVNPTK-LPFIIMLVGVQGSGKTTTAGKLAYFYKK 130
Query: 128 KGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLI 187
+G+K LV AD +R A+DQL Q + + YG +P+ IA +GV+ F K D+I
Sbjct: 131 RGYKVGLVAADVYRPAAYDQLLQLGNQIGVQVYGEPNNQNPIEIAKKGVDIFVKNKMDII 190
Query: 188 IVDTSGRH--KQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGA 245
IVDT+GRH +E L EEM+++ + + PD VI V+D+SIGQ A+D A F Q+ +G+
Sbjct: 191 IVDTAGRHGYGEETKLLEEMKEMYD-VLKPDDVILVIDASIGQKAYDLASRFHQASPIGS 249
Query: 246 VIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFM 305
VI+TKMDG AKGGGALSAV AT + + FIGTGE +DE E F+ K FVSR+LGMGD +
Sbjct: 250 VIITKMDGTAKGGGALSAVVATGATIKFIGTGEKIDELETFNAKRFVSRILGMGDIESIL 309
Query: 306 DKIHEVVPMDQQPELLQKLSE--GNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMP 363
+K+ + D+ + ++ + E G TLR +Y Q + KMGP+ +V +PG ++P
Sbjct: 310 EKVKGLEEYDKIQKKMEDVMEGKGKLTLRDVYAQIIALRKMGPLSKVLQHIPGLGI-MLP 368
Query: 364 KGRE---KESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSG 410
E K + KI+R++ ++SMT +EL+ NP +++ SR+ RIA GSG
Sbjct: 369 TPSEDQLKIGEEKIRRWLAALNSMTYKELE--NPNIIDKSRMRRIAEGSG 416
>gi|409721153|ref|ZP_11269367.1| signal recognition particle protein Srp54 [Halococcus hamelinensis
100A6]
gi|448722162|ref|ZP_21704701.1| signal recognition particle protein Srp54 [Halococcus hamelinensis
100A6]
gi|445790153|gb|EMA40823.1| signal recognition particle protein Srp54 [Halococcus hamelinensis
100A6]
Length = 468
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 164/441 (37%), Positives = 263/441 (59%), Gaps = 14/441 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ + ++ T +D + E + EI R+L+QADV+ LV ++ I+
Sbjct: 1 MVLDDLGSSLRGTLNRLQGKTRLDADDVEEVVREIQRSLIQADVEISLVMDLSDRIEDRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ G R + + ++ E+ ++ G+ + P + + I+ GLQGSGKTTT K
Sbjct: 61 LNEEPPGGTTARDFVLRIVYEEMVDLV--GESTDLPLESQ--TILLAGLQGSGKTTTAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KKG +PA++ DTFR GA+DQ KQ A +A++ FYG DPV IA EG+E
Sbjct: 117 MAWWFSKKGLRPAVIQTDTFRPGAYDQSKQMAERAEVTFYGDPDSDDPVEIAREGLEA-- 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
+ ++ IVDT+GRH E L +E+R + + V PD + VMD++IGQ A DQA+ F+ +
Sbjct: 175 ADEAEVKIVDTAGRHALEDDLIDEIRAIDD-VVQPDRSLLVMDAAIGQGAKDQARRFEDA 233
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
+ + V++TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 234 IGIDGVVITKLDGTAKGGGALTAVNETDSSIAFLGTGETVQDVERFEPNGFISRLLGMGD 293
Query: 301 WSGFMDKIHEVV--PMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFS 358
+++ + D++ +++ +G FTL+ M Q + KMGP+ QV M+PG
Sbjct: 294 LKQLAERVERAMETTDDEEDWDPEEILQGQFTLKDMRHQMDAMNKMGPLDQVLDMIPGLG 353
Query: 359 SEL---MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVRE 415
L +P +Q +++ + +MDSMT+ EL+ NP+ + S+ RIARGSG+
Sbjct: 354 GGLKDQLPDDAMDVTQDRMRSFDIVMDSMTDSELE--NPRSVGASQTRRIARGSGQPEER 411
Query: 416 VMEMLEEYKRLAKIWSKMKGL 436
V E+LE+++ + + + +G+
Sbjct: 412 VRELLEQHRMMERTLKQFQGM 432
>gi|448357209|ref|ZP_21545915.1| signal recognition particle protein Srp54 [Natrialba chahannaoensis
JCM 10990]
gi|445650017|gb|ELZ02948.1| signal recognition particle protein Srp54 [Natrialba chahannaoensis
JCM 10990]
Length = 462
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 168/445 (37%), Positives = 261/445 (58%), Gaps = 21/445 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ ++ ++ + I E+ + E + EI R+LL ADV LV E+ NIK+
Sbjct: 1 MVLDDLGSSLRGSLDKLRGKSRISEEDVEEIVKEIQRSLLSADVDVSLVMELSDNIKERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG R + + ++ EL ++ G + P + + I+ GLQGSGKTT+ K
Sbjct: 61 LEEEPPAGTPARDFVLRIVYEELVGLI--GDSTELPLEEQ--TILLAGLQGSGKTTSSAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KG +PA++ DTFR GA+DQ K+ A +A++ FYG+ DPV IA +G+E
Sbjct: 117 MAWWFSTKGLRPAIIQTDTFRPGAYDQAKEMAGRAEVDFYGNPDNDDPVEIARKGLEATS 176
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
+ D+ IVDT+GRH E L +E+ ++ E PD + V+D++IGQ A +QAQ F +S
Sbjct: 177 E--ADVHIVDTAGRHALEDDLIDEIEEI-EGVAQPDTSLLVLDAAIGQGAKEQAQQFDES 233
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
+ + V++TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 234 IGIDGVVITKLDGTAKGGGALTAVDQTDSSIAFLGTGEEVQDVERFEPDSFISRLLGMGD 293
Query: 301 WSGFMDKIH------EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSML 354
+++ ++ D PE + +G FTL M +Q + + MGP+ QV M+
Sbjct: 294 LGQLAERVERAMEQTQIEDDDWDPE---DMLQGQFTLNDMQKQMEAMNNMGPLDQVMDMI 350
Query: 355 PGFSS---ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGR 411
PGF + +P +Q ++ + +MDSMT+ E PK + S+I RIARGSG
Sbjct: 351 PGFGGGIKDQLPDDAMDVTQERMHTFSVIMDSMTDAE--KEYPKAIGASQIERIARGSGT 408
Query: 412 QVREVMEMLEEYKRLAKIWSKMKGL 436
+V E+L++YK + K + +G+
Sbjct: 409 SEEKVRELLQQYKMMEKTIKQFQGM 433
>gi|292659708|pdb|3KL4|A Chain A, Recognition Of A Signal Peptide By The Signal Recognition
Particle
Length = 433
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 165/410 (40%), Positives = 254/410 (61%), Gaps = 13/410 (3%)
Query: 9 SISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAG 68
+I A+++ + EK ++E + ++ ++L+ +DV KLV + IK+ +N + +
Sbjct: 5 NIRDAVRKFLTGSTPYEKAVDEFIKDLQKSLISSDVNVKLVFSLTAKIKERLNKEKPPSV 64
Query: 69 HNKRRIIQQAIFNELCKMLDPGK-PSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQK 127
++ +++EL K+ K P+ P K P +IM VG+QGSGKTTT K AY+++K
Sbjct: 65 LERKEWFISIVYDELSKLFGGDKEPNVNPTK-LPFIIMLVGVQGSGKTTTAGKLAYFYKK 123
Query: 128 KGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLI 187
+G+K LV AD +R A+DQL Q + + YG +P+ IA +GV+ F K D+I
Sbjct: 124 RGYKVGLVAADVYRPAAYDQLLQLGNQIGVQVYGEPNNQNPIEIAKKGVDIFVKNKMDII 183
Query: 188 IVDTSGRH--KQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGA 245
IVDT+GRH +E L EEM+++ + + PD VI V+D+SIGQ A+D A F Q+ +G+
Sbjct: 184 IVDTAGRHGYGEETKLLEEMKEMYD-VLKPDDVILVIDASIGQKAYDLASRFHQASPIGS 242
Query: 246 VIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFM 305
VI+TKMDG AKGGGALSAV AT + + FIGTGE +DE E F+ K FVSR+LGMGD +
Sbjct: 243 VIITKMDGTAKGGGALSAVVATGATIKFIGTGEKIDELETFNAKRFVSRILGMGDIESIL 302
Query: 306 DKIHEVVPMDQQPELLQKLSE--GNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMP 363
+K+ + D+ + ++ + E G TLR +Y Q + KMGP+ +V +PG ++P
Sbjct: 303 EKVKGLEEYDKIQKKMEDVMEGKGKLTLRDVYAQIIALRKMGPLSKVLQHIPGLGI-MLP 361
Query: 364 KGRE---KESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSG 410
E K + KI+R++ ++SMT +EL+ NP +++ SR+ RIA GSG
Sbjct: 362 TPSEDQLKIGEEKIRRWLAALNSMTYKELE--NPNIIDKSRMRRIAEGSG 409
>gi|383619954|ref|ZP_09946360.1| signal recognition particle protein Srp54 [Halobiforma lacisalsi
AJ5]
gi|448696432|ref|ZP_21697906.1| signal recognition particle protein Srp54 [Halobiforma lacisalsi
AJ5]
gi|445783638|gb|EMA34466.1| signal recognition particle protein Srp54 [Halobiforma lacisalsi
AJ5]
Length = 462
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 171/445 (38%), Positives = 269/445 (60%), Gaps = 21/445 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ ++ ++ + I E+ ++E + EI R+L+ ADV LV+E+ NIK+
Sbjct: 1 MVLDDLGSSLRGSLDKLRGKSRISEEDVDEIVKEIQRSLISADVDISLVQELSDNIKERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG R + + ++ EL +++ G + P + + I+ GLQGSGKTT+ K
Sbjct: 61 MEEEPPAGTPARDFVLRIVYEELVELI--GDSTELPLEEQ--TILLAGLQGSGKTTSAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KG +PA++ DTFR GA+DQ K+ A +A++ FYG+ DPV IA +G+E +
Sbjct: 117 MAWWFSTKGLRPAVIQTDTFRPGAYDQAKEMAERAEVDFYGNPDNDDPVEIARKGLE--E 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
E+ D+ IVDT+GRH E L +E+ ++ V PD + V+D++IGQ A DQAQ F +S
Sbjct: 175 TEDADVHIVDTAGRHALEDDLIDEIEEIE-DVVEPDTSLLVLDAAIGQGAKDQAQQFDES 233
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
+ + V++TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 234 IGIDGVVITKLDGTAKGGGALTAVDQTDSSIAFLGTGEEVQDVERFEPDGFISRLLGMGD 293
Query: 301 WSGFMDKIH------EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSML 354
S +++ E+ D PE + +G FTL M +Q + + MGP+ QV M+
Sbjct: 294 LSQLAERVERAMQQTEIEEDDWDPE---DMLQGQFTLNDMQKQMEAMNNMGPLDQVMDMI 350
Query: 355 PGFSS---ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGR 411
PGF + +P +Q +++++ +MDSMT E + PK + S+I RIARGSG
Sbjct: 351 PGFGGGIKDQLPDDAMDVTQERMRKFSVIMDSMT--EAEKEYPKAIGASQIERIARGSGT 408
Query: 412 QVREVMEMLEEYKRLAKIWSKMKGL 436
+V E+L++YK + K + +G+
Sbjct: 409 DEEDVRELLQQYKMMEKTIKQFQGM 433
>gi|15897850|ref|NP_342455.1| Signal recognition particle protein subunit SRP54 (srp54)
[Sulfolobus solfataricus P2]
gi|21362961|sp|Q97ZE7.1|SRP54_SULSO RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|13814155|gb|AAK41245.1| Signal recognition particle protein subunit SRP54 (srp54)
[Sulfolobus solfataricus P2]
Length = 447
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 165/410 (40%), Positives = 254/410 (61%), Gaps = 13/410 (3%)
Query: 9 SISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAG 68
+I A+++ + EK ++E + ++ ++L+ +DV KLV + IK+ +N + +
Sbjct: 4 NIRDAVRKFLTGSTPYEKAVDEFIKDLQKSLISSDVNVKLVFSLTAKIKERLNKEKPPSV 63
Query: 69 HNKRRIIQQAIFNELCKMLDPGK-PSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQK 127
++ +++EL K+ K P+ P K P +IM VG+QGSGKTTT K AY+++K
Sbjct: 64 LERKEWFISIVYDELSKLFGGDKEPNVNPTK-LPFIIMLVGVQGSGKTTTAGKLAYFYKK 122
Query: 128 KGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLI 187
+G+K LV AD +R A+DQL Q + + YG +P+ IA +GV+ F K D+I
Sbjct: 123 RGYKVGLVAADVYRPAAYDQLLQLGNQIGVQVYGEPNNQNPIEIAKKGVDIFVKNKMDII 182
Query: 188 IVDTSGRH--KQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGA 245
IVDT+GRH +E L EEM+++ + + PD VI V+D+SIGQ A+D A F Q+ +G+
Sbjct: 183 IVDTAGRHGYGEETKLLEEMKEMYD-VLKPDDVILVIDASIGQKAYDLASRFHQASPIGS 241
Query: 246 VIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFM 305
VI+TKMDG AKGGGALSAV AT + + FIGTGE +DE E F+ K FVSR+LGMGD +
Sbjct: 242 VIITKMDGTAKGGGALSAVVATGATIKFIGTGEKIDELETFNAKRFVSRILGMGDIESIL 301
Query: 306 DKIHEVVPMDQQPELLQKLSE--GNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMP 363
+K+ + D+ + ++ + E G TLR +Y Q + KMGP+ +V +PG ++P
Sbjct: 302 EKVKGLEEYDKIQKKMEDVMEGKGKLTLRDVYAQIIALRKMGPLSKVLQHIPGLGI-MLP 360
Query: 364 KGRE---KESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSG 410
E K + KI+R++ ++SMT +EL+ NP +++ SR+ RIA GSG
Sbjct: 361 TPSEDQLKIGEEKIRRWLAALNSMTYKELE--NPNIIDKSRMRRIAEGSG 408
>gi|257387282|ref|YP_003177055.1| GTP-binding signal recognition particle SRP54 G- domain-containing
protein [Halomicrobium mukohataei DSM 12286]
gi|257169589|gb|ACV47348.1| GTP-binding signal recognition particle SRP54 G- domain protein
[Halomicrobium mukohataei DSM 12286]
Length = 468
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 167/445 (37%), Positives = 265/445 (59%), Gaps = 21/445 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ + + + I E+ + + + EI R+LLQADV LV+++ IK
Sbjct: 1 MVLDDLGSSLRGTLDDLRGKSRISEEDIEDIVKEIQRSLLQADVDVGLVQDLSDGIKSRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG R + + ++ EL ++ G+ + P + + IM GL GSGKTTT K
Sbjct: 61 LDEEPPAGTTPRDWVLRIVYEELVDLV--GESTEIPLENQ--TIMLAGLYGSGKTTTAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KKG +PA++ DT R GA+DQ KQ A A++ FYG +DPV IA EG+
Sbjct: 117 MAWWFSKKGLRPAVIQTDTDRPGAYDQSKQMADNAEVEFYGDEDSNDPVEIAREGLAA-- 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
E+ D+ IVDT+GR L +++ ++ A V PD + V+D+++GQ+A DQAQ F+ +
Sbjct: 175 TEDADVRIVDTAGRDGLNEELIDQIERIG-AEVQPDRNLLVIDAAMGQSAKDQAQEFEDA 233
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
+ + V +TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 234 IGIDGVAITKLDGTAKGGGALAAVDQTDSTIAFLGTGETVKDIERFEPSGFISRLLGMGD 293
Query: 301 WSGFMDKIHEVVPM------DQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSML 354
+++ + D +PE + EG+FTL+ M +Q + + MGP+ QV M+
Sbjct: 294 LKQLTERVERAMEETGEEEGDWEPE---DMMEGSFTLKDMRKQMEAMNNMGPLDQVMDMI 350
Query: 355 PGFSSELM---PKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGR 411
PG LM P +Q +++ + +MDSMT EEL+ NP+++ SR RIARGSG+
Sbjct: 351 PGLGGGLMDQLPDDAMDVTQERMRDFEVIMDSMTEEELE--NPRVVGQSRTERIARGSGK 408
Query: 412 QVREVMEMLEEYKRLAKIWSKMKGL 436
+ E+L+++K++ ++ ++ +G+
Sbjct: 409 PEERIRELLQQHKQMDQMLNQFQGM 433
>gi|284175659|ref|ZP_06389628.1| Signal recognition particle protein subunit SRP54 (srp54)
[Sulfolobus solfataricus 98/2]
gi|384434404|ref|YP_005643762.1| GTP-binding signal recognition particle SRP54 G- domain-containing
protein [Sulfolobus solfataricus 98/2]
gi|261602558|gb|ACX92161.1| GTP-binding signal recognition particle SRP54 G- domain protein
[Sulfolobus solfataricus 98/2]
Length = 447
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 164/410 (40%), Positives = 254/410 (61%), Gaps = 13/410 (3%)
Query: 9 SISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAG 68
+I A+++ + EK ++E + ++ ++L+ +DV KLV + IK+ +N + +
Sbjct: 4 NIRDAVRKFLTGSTPYEKAVDEFIKDLQKSLISSDVNVKLVFSLTAKIKERLNKEKPPSV 63
Query: 69 HNKRRIIQQAIFNELCKMLDPGK-PSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQK 127
++ +++EL K+ K P+ P K P +IM VG+QGSGKTTT K AY+++K
Sbjct: 64 LERKEWFISIVYDELSKLFGGDKEPNVNPTK-LPFIIMLVGVQGSGKTTTAGKLAYFYKK 122
Query: 128 KGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLI 187
+G+K LV AD +R A+DQL Q + + YG +P+ IA +GV+ F K D+I
Sbjct: 123 RGYKVGLVAADVYRPAAYDQLLQLGNQIGVQVYGEPNNQNPIEIAKKGVDIFVKNKMDII 182
Query: 188 IVDTSGRH--KQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGA 245
IVDT+GRH +E L EEM+++ + + PD VI V+D+SIGQ A+D A F Q+ +G+
Sbjct: 183 IVDTAGRHGYGEETKLLEEMKEMYD-VLKPDDVILVIDASIGQKAYDLASRFHQASPIGS 241
Query: 246 VIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFM 305
+I+TKMDG AKGGGALSAV AT + + FIGTGE +DE E F+ K FVSR+LGMGD +
Sbjct: 242 IIITKMDGTAKGGGALSAVVATGATIKFIGTGEKIDELETFNAKRFVSRILGMGDIESIL 301
Query: 306 DKIHEVVPMDQQPELLQKLSE--GNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMP 363
+K+ + D+ + ++ + E G TLR +Y Q + KMGP+ +V +PG ++P
Sbjct: 302 EKVKGLEEYDKIQKKMEDVMEGKGKLTLRDVYAQIIALRKMGPLSKVLQHIPGLGI-MLP 360
Query: 364 KGRE---KESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSG 410
E K + KI+R++ ++SMT +EL+ NP +++ SR+ RIA GSG
Sbjct: 361 TPSEDQLKIGEEKIRRWLAALNSMTYKELE--NPNIIDKSRMRRIAEGSG 408
>gi|448503443|ref|ZP_21613074.1| signal recognition particle protein Srp54 [Halorubrum coriense DSM
10284]
gi|445692311|gb|ELZ44489.1| signal recognition particle protein Srp54 [Halorubrum coriense DSM
10284]
Length = 463
Score = 298 bits (764), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 165/442 (37%), Positives = 263/442 (59%), Gaps = 15/442 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ ++ ++ + + E + E + EI R+LL ADV LV E+ +IK
Sbjct: 1 MVLDDLGTSLRSSLDKLQGKSRLSESDVEEIVKEIQRSLLSADVDVSLVMELSDSIKSRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ G + + + ++ E+ +++ G + P + + I+ GLQGSGKTT+ K
Sbjct: 61 LEEEPPGGTTAKDHVLKIVYEEMVELV--GDSTRLPLENQ--TILLAGLQGSGKTTSAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KKG +PA+V DTFR GA+DQ KQ +A++ FYG+ DPV IA G+E +
Sbjct: 117 MAWWFSKKGLRPAVVQTDTFRPGAYDQAKQMCERAEVDFYGNPDNDDPVDIARTGLE--E 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
+ D+ IVDT+GRH E L E+ ++ E V+PD + V+D++IGQ A +QA+ F++S
Sbjct: 175 TADADVHIVDTAGRHALEDDLIAEIEEI-EGVVDPDRSLLVLDAAIGQGAKEQARQFEES 233
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
+ + V++TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 234 IGIEGVVITKLDGTAKGGGALTAVNETDSSIAFLGTGETVQDIERFEPSGFISRLLGMGD 293
Query: 301 WSGFMDKIHEVVPMDQ---QPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGF 357
+++ + Q + + + +G+FTL M Q + KMGP+ QV M+PG
Sbjct: 294 LKQLSERVERAMQETQEEDEDWDPEDMLQGDFTLNDMKRQMDAMNKMGPLDQVMDMIPGL 353
Query: 358 SSELM---PKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVR 414
+M P +Q +++R+ +MDSMT EEL+ NP+++ SR RIARGSG
Sbjct: 354 GGGMMDELPDDAMDVTQDRMRRFERIMDSMTEEELE--NPRVVGQSRTERIARGSGTDEE 411
Query: 415 EVMEMLEEYKRLAKIWSKMKGL 436
V ++LE++ + + S+ +G+
Sbjct: 412 TVQQLLEQHSMMEQTISQFQGM 433
>gi|219851208|ref|YP_002465640.1| signal recognition particle protein Srp54 [Methanosphaerula
palustris E1-9c]
gi|219545467|gb|ACL15917.1| GTP-binding signal recognition particle SRP54 G- domain protein
[Methanosphaerula palustris E1-9c]
Length = 440
Score = 298 bits (764), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 165/437 (37%), Positives = 262/437 (59%), Gaps = 18/437 (4%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L +LG S+ A+++++ T++D + E + ++ RAL+Q+DV KLV + IK
Sbjct: 1 MLDRLGSSLKDALKKLAGKTVVDRAAVEELVKDLQRALIQSDVNVKLVMNLSQAIKTRSL 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
++ G R + + ++ EL ++ P G+ +++M GLQGSGKTTT K
Sbjct: 61 EEEPLKGMGVREHVLRIVYQELVGLMGP---EVEVTLGQQTILM-AGLQGSGKTTTTAKL 116
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKK 181
A Y Q+KG + A++C DTFR GA+ Q+ K +P +G E+D V+I +G+++ +
Sbjct: 117 ARYFQRKGLRVAVICGDTFRPGAYQQISTLCQKINVPCFGDPNETDAVKIVTKGLKSVGQ 176
Query: 182 ENCDLIIVDTSGRHKQEAALFEE---MRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFK 238
+++I+DT GRH E L +E + +S+AT V+D+++GQ A +QA+ F
Sbjct: 177 --AEVLIIDTQGRHALEEGLIQEIVDLNTLSKATHR----WLVIDAALGQQASEQARRFH 230
Query: 239 QSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGM 298
Q++ + VI+TKMDG AKGGGALSAVA TKS ++FIG+GE +++ E FD F+SRLLGM
Sbjct: 231 QAIDIDGVIITKMDGTAKGGGALSAVAETKSGIVFIGSGETIEDLERFDPDGFISRLLGM 290
Query: 299 GDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFS 358
GD +++ E + + + + G FTLR MY+Q + + KMGP+ Q+ SMLP
Sbjct: 291 GDLKALVERAEEAITTEDVD--VNSMLRGKFTLRDMYKQLEAVNKMGPLKQIMSMLP-LG 347
Query: 359 SELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVME 418
+ +P + + K+ RY +MDSMTNEELD +P ++ SR+ RIA G+G EV E
Sbjct: 348 NVDIPNDVYEVTGTKMVRYRIIMDSMTNEELD--DPAVIGSSRMHRIATGAGASPDEVRE 405
Query: 419 MLEEYKRLAKIWSKMKG 435
+L +K + + M+G
Sbjct: 406 LLRYHKTMQRALKGMRG 422
>gi|448354426|ref|ZP_21543183.1| signal recognition particle protein Srp54 [Natrialba hulunbeirensis
JCM 10989]
gi|445637943|gb|ELY91090.1| signal recognition particle protein Srp54 [Natrialba hulunbeirensis
JCM 10989]
Length = 493
Score = 298 bits (764), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 168/445 (37%), Positives = 260/445 (58%), Gaps = 21/445 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ ++ ++ + I E+ + E + EI R+LL ADV LV E+ NIK
Sbjct: 32 MVLDDLGSSLRGSLDKLRGKSRISEEDVEEIVKEIQRSLLSADVDVSLVMELSDNIKARA 91
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG R + + ++ EL ++ G + P + + I+ GLQGSGKTT+ K
Sbjct: 92 LEEEPPAGTPARDFVLRIVYEELVGLI--GDSTELPLEEQ--TILLAGLQGSGKTTSSAK 147
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KG +PA++ DTFR GA+DQ K+ A +A++ FYG+ DPV IA +G+E
Sbjct: 148 MAWWFSTKGLRPAIIQTDTFRPGAYDQAKEMAGRAEVDFYGNPDNDDPVDIARKGLEATS 207
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
+ D+ IVDT+GRH E L +E+ ++ E PD + V+D++IGQ A +QAQ F +S
Sbjct: 208 E--ADVHIVDTAGRHALEDDLIDEIEEI-EGVAQPDTSLLVLDAAIGQGAKEQAQQFDES 264
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
+ + V++TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 265 IGIDGVVITKLDGTAKGGGALTAVDQTDSSIAFLGTGEEVQDVERFEPDSFISRLLGMGD 324
Query: 301 WSGFMDKIH------EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSML 354
+++ ++ D PE + +G FTL M +Q + + MGP+ QV M+
Sbjct: 325 LGQLAERVERAMEQTQIEDDDWDPE---DMLQGQFTLNDMQKQMEAMNNMGPLDQVMDMI 381
Query: 355 PGFSS---ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGR 411
PGF + +P +Q ++ + +MDSMT+ E PK + S+I RIARGSG
Sbjct: 382 PGFGGGIKDQLPDDAMDVTQERMHSFSVIMDSMTDAE--KEYPKAIGASQIERIARGSGT 439
Query: 412 QVREVMEMLEEYKRLAKIWSKMKGL 436
+V E+L++YK + K + +G+
Sbjct: 440 SEEQVRELLQQYKMMEKTIKQFQGM 464
>gi|452207929|ref|YP_007488051.1| signal recognition particle 54K protein [Natronomonas moolapensis
8.8.11]
gi|452084029|emb|CCQ37362.1| signal recognition particle 54K protein [Natronomonas moolapensis
8.8.11]
Length = 464
Score = 298 bits (763), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 162/441 (36%), Positives = 264/441 (59%), Gaps = 14/441 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ + ++ T + E + + EI R+LL ADV LV + +I++
Sbjct: 1 MVLDDLGSSLRGTLDKLQGKTTLSEDDVEAIVKEIQRSLLSADVDVDLVMALSDSIRERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG R + + ++ E+ +++ G+ + P + I+ GLQGSGKTTT K
Sbjct: 61 VEEEPPAGTTARDHVLKIVYEEMVELV--GESTDLPLE--EQTIVLAGLQGSGKTTTAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KKG +PA+V DTFR GA++Q K+ +A++ FYG+ DPV IA G+E +
Sbjct: 117 MAWWFSKKGLRPAVVQTDTFRPGAYEQAKEMCERAEVEFYGNPDNDDPVDIARTGLE--E 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
+ D+ IVDT+GRH E L +E+ ++ E+ +PD + V+D++IGQ A DQA+ F +
Sbjct: 175 TADADVHIVDTAGRHALEEVLIDELERI-ESVADPDRNLLVLDAAIGQGAKDQAERFHDA 233
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V + V++TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 234 VGIDGVVITKLDGTAKGGGALAAVDQTDSSIAFLGTGEEVKDVERFEASGFISRLLGMGD 293
Query: 301 WSGFMDKIHEVVPMDQQPELL--QKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFS 358
+++ + Q E + L +G FTL+ M Q + +MGP+ QV M+PG
Sbjct: 294 LKQLSERVERAMAETQAEEDWDPEDLMQGEFTLKDMRNQMNAMNRMGPLDQVLDMIPGLG 353
Query: 359 S---ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVRE 415
+ +P+ +Q +++ + +MDSMT+ EL+ +P+ + S+I RIARGSG+
Sbjct: 354 GGIKDQLPEDAMDMTQERLRDFEVIMDSMTDAELE--HPRAIGQSQIERIARGSGKDEET 411
Query: 416 VMEMLEEYKRLAKIWSKMKGL 436
V E+LE++K ++++ + +G+
Sbjct: 412 VRELLEQHKMMSQMMKQFQGM 432
>gi|448467845|ref|ZP_21599645.1| signal recognition particle protein Srp54 [Halorubrum kocurii JCM
14978]
gi|445811570|gb|EMA61574.1| signal recognition particle protein Srp54 [Halorubrum kocurii JCM
14978]
Length = 464
Score = 298 bits (763), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 163/442 (36%), Positives = 265/442 (59%), Gaps = 15/442 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ ++ ++ + + E + E + EI R+LL ADV LV E+ +IK
Sbjct: 1 MVLDDLGTSLRSSLDKLQGKSRLSESDVEEIVKEIQRSLLSADVDVSLVMELSDSIKSRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ G + + + ++ E+ +++ G + P + + I+ GLQGSGKTT+ K
Sbjct: 61 LDEEPPGGTTAKDHVLKIVYEEMVELV--GDSTELPLENQ--TILLAGLQGSGKTTSAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KKG +PA++ DTFR GA+DQ KQ +A++ FYG DPV IA G+E +
Sbjct: 117 MAWWFSKKGLRPAVIQTDTFRPGAYDQAKQMCERAEVEFYGDPDNDDPVDIARTGLE--E 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
E+ D+ IVDT+GRH E L E+ ++ E V+PD + V+D++IGQ A +QA+ F++S
Sbjct: 175 TEDADVHIVDTAGRHALEDDLIAEIEEI-EGAVDPDRSLLVLDAAIGQGAKEQARQFEES 233
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
+ + V++TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 234 IGIEGVMITKLDGTAKGGGALTAVNETDSSIAFLGTGETVQDIERFEPSGFISRLLGMGD 293
Query: 301 WSGFMDKIHEVVPMDQ---QPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGF 357
+++ + Q + + + +G FTL+ M +Q + +MGP+ QV M+PG
Sbjct: 294 LKQLSERVERAMQETQEEDEDWDPEDMLKGEFTLKDMKKQMDAMNRMGPLDQVMDMIPGL 353
Query: 358 SSELM---PKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVR 414
+M P +Q +++++ +MDSMT+EEL +NP+++ SR RIARGSG
Sbjct: 354 GGGMMDQLPDDAMDVTQDRMRKFERIMDSMTDEEL--TNPRVVGQSRTERIARGSGTDEE 411
Query: 415 EVMEMLEEYKRLAKIWSKMKGL 436
V ++LE++ + + S+ +G+
Sbjct: 412 TVQQLLEQHSMMEQTISQFQGM 433
>gi|307353993|ref|YP_003895044.1| GTP-binding signal recognition particle SRP54 G- domain-containing
protein [Methanoplanus petrolearius DSM 11571]
gi|307157226|gb|ADN36606.1| GTP-binding signal recognition particle SRP54 G- domain protein
[Methanoplanus petrolearius DSM 11571]
Length = 441
Score = 298 bits (762), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 165/427 (38%), Positives = 260/427 (60%), Gaps = 12/427 (2%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L +LG + A+++++ T+ID+ + E + ++ R LLQADV KLV + IK+
Sbjct: 1 MLDRLGSGLKDALKKLAGKTVIDKAAVEELVKDLQRVLLQADVNVKLVMNLSKAIKQRSL 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
++ G + R + + ++ EL ++ G P I+ GLQGSGKTTT K
Sbjct: 61 EEEPPKGMSVREHVLRIVYQELVNLMGE---EIEVTLG-PQTILMAGLQGSGKTTTTGKL 116
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKK 181
+ Y QKKG + ++CAD FR GA+DQLK K +P YG E + V+I G++ K
Sbjct: 117 SRYFQKKGLRVGVICADVFRPGAYDQLKTLCDKVNVPCYGEPGEINAVKIVENGMKQLK- 175
Query: 182 ENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSV 241
N +++I+DT GRH E L +E+ ++++ + V+D+++GQ A +QA F ++
Sbjct: 176 -NAEVLIIDTQGRHALEDELIDEIIKINDLS-KASHRWLVLDAALGQQAREQAARFHDAI 233
Query: 242 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 301
++ VI+TKMDG AKGGGALSAVA T S ++F+G+GE +D+ E FD F+SRLLGMGD
Sbjct: 234 NIDGVIITKMDGTAKGGGALSAVAETGSGIVFVGSGETIDDLERFDPDSFISRLLGMGDL 293
Query: 302 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 361
+++ E + ++ + + +G FTLR MY+Q +++ KMGP+ QV SMLP + E+
Sbjct: 294 KSLIERAEEAINAEEVD--VNAMMKGKFTLRDMYKQLESLKKMGPLKQVMSMLPLGNIEI 351
Query: 362 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLE 421
P+ + K++ Y +MDSMTNEELD +P +++ SRI RIA G+G EV E+L+
Sbjct: 352 -PEDAFDTTGKKMEAYKVIMDSMTNEELD--DPSVIHASRIQRIATGAGVSQEEVRELLK 408
Query: 422 EYKRLAK 428
+K + +
Sbjct: 409 YHKTMQR 415
>gi|124365569|gb|ABN09803.1| GTP-binding signal recognition particle SRP54, G-domain [Medicago
truncatula]
Length = 314
Score = 298 bits (762), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 174/336 (51%), Positives = 208/336 (61%), Gaps = 53/336 (15%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M LA LGG I R +MSN T+ID+++ C+NEITRA +Q+ ++ KL+R+M IK I+
Sbjct: 1 MGLADLGGRILRGFDKMSNETVIDKEIRKRCVNEITRAFIQSIIEPKLIRDMHAKIKNII 60
Query: 61 ----NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTT 116
NLDD A R++IQQ PS GKTT
Sbjct: 61 YNHLNLDDFDAA---RKMIQQV----------------------PSC--------CGKTT 87
Query: 117 TCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGV 176
TC ++A ++QKKG K LVC DT R GAFDQLKQ + IP YG R E
Sbjct: 88 TCAQFANHYQKKGLKTGLVCTDTLRNGAFDQLKQIYAETNIPCYGRVGYCQNCR---ERC 144
Query: 177 ETFKKENCDLIIVDTSGRHKQEA-ALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFD--- 232
+ NCDLIIVD SG HKQE AL EE+ QVS+AT PDLVI V+D +IGQ AFD
Sbjct: 145 GQMQGGNCDLIIVDVSGGHKQEEDALIEEIHQVSKAT-KPDLVILVIDGNIGQHAFDHRS 203
Query: 233 --QAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKP 290
QA AF QSV +GAVIV+KMDG+A GGG+LSAVAATKS VIFIGTGEHMDEFEVF+VKP
Sbjct: 204 LKQATAFTQSVDIGAVIVSKMDGYAMGGGSLSAVAATKSSVIFIGTGEHMDEFEVFEVKP 263
Query: 291 FVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSE 326
FVS LLGM DW F+D+++EV PEL L E
Sbjct: 264 FVSSLLGMDDWYEFIDRVYEV------PELPLNLPE 293
>gi|448320595|ref|ZP_21510081.1| signal recognition particle protein Srp54 [Natronococcus
amylolyticus DSM 10524]
gi|445605497|gb|ELY59419.1| signal recognition particle protein Srp54 [Natronococcus
amylolyticus DSM 10524]
Length = 466
Score = 297 bits (760), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 167/448 (37%), Positives = 262/448 (58%), Gaps = 16/448 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ + ++ + + E+ + E + EI R+LL ADV LV E+ NIK+
Sbjct: 1 MVLDDLGSSLRGTLDKLRGKSRLSEEDIEEIVKEIQRSLLSADVDVSLVMELSDNIKERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG R + + ++ EL ++ G+ + P + + I+ GLQGSGKTT+ K
Sbjct: 61 LEEEPPAGTPARDFVLRIVYEELVDLI--GESTDLPLEEQ--TILLAGLQGSGKTTSAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KG +PA++ DTFR GA+DQ K+ +A++ FYG+ DPV IA G+E +
Sbjct: 117 MAWWFSTKGLRPAVIQTDTFRPGAYDQAKEMCERAEVDFYGNPDNDDPVEIARNGLE--E 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
D+ IVDT+GRH E L +E+ Q+ E TV+PD + V+D++IGQ A DQAQ F +S
Sbjct: 175 TGEADVHIVDTAGRHALEDDLIDEIEQIEE-TVDPDKSLLVLDAAIGQGAKDQAQQFDES 233
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
+ + V++TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 234 IGIDGVVITKLDGTAKGGGALTAVDQTDSSIAFLGTGEEVQDVERFEPDGFISRLLGMGD 293
Query: 301 WSGFMDKI----HEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPG 356
+++ + D + + + G FTL M +Q + + MGP+ QV M+PG
Sbjct: 294 LGQLAERVERAMQQTDIEDDEEWDPEDMLTGQFTLNDMQKQMEAMNNMGPLDQVMDMIPG 353
Query: 357 FSS---ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQV 413
F + +P +Q +++ + +MDSMT E + PK + +I RIARGSG
Sbjct: 354 FGGGIKDQLPDDAMDVTQERMRAFSVIMDSMT--ETEKEYPKAIGADQIERIARGSGTSE 411
Query: 414 REVMEMLEEYKRLAKIWSKMKGLKIPKK 441
+V E+L++YK + + + +G+ K+
Sbjct: 412 EQVRELLQQYKMMERTIKQFQGMGSDKE 439
>gi|448731425|ref|ZP_21713725.1| signal recognition particle protein Srp54 [Halococcus
saccharolyticus DSM 5350]
gi|445792178|gb|EMA42790.1| signal recognition particle protein Srp54 [Halococcus
saccharolyticus DSM 5350]
Length = 467
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 166/442 (37%), Positives = 266/442 (60%), Gaps = 15/442 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ + ++ T +DE+ + E + EI R+L+QADV+ LV E+ +I++
Sbjct: 1 MVLDDLGSSLRGTLDRLQGKTRLDEEDVEEVVREIQRSLIQADVEIDLVMELSDSIEQRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ G R + + ++ E+ ++ G+ + P + P I+ GLQGSGKTTT K
Sbjct: 61 LEEEPPGGTTARDFVLRIVYEEMVDLV--GESTDLPLE--PQTILLAGLQGSGKTTTAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KKG +PA++ DTFR GA+DQ K+ A +A++ FYG DPV+IA +G+
Sbjct: 117 MAWWFSKKGLRPAVIQTDTFRPGAYDQAKEMAERAEVTFYGDPDADDPVQIARDGLAA-- 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
E D+ IVDT+GRH E L +E++++ +A V PD + VMD+++GQ A DQAQ F+++
Sbjct: 175 TEEADIHIVDTAGRHALEEGLIDEIQEI-DAVVEPDRSLLVMDAALGQGAKDQAQRFEEA 233
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
+ + V +TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 234 IGIDGVAITKLDGTAKGGGALTAVNETDSSIAFLGTGETVQDVERFEPNGFISRLLGMGD 293
Query: 301 WSGFMDKIHEVVPMDQQPELL---QKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGF 357
+++ + E + + EG FTL+ M Q + KMGP+ QV M+PG
Sbjct: 294 LKQLAERVERAMADTDTDEEDWDPEDILEGQFTLKDMRHQMDAMNKMGPLDQVLDMIPGL 353
Query: 358 SS---ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVR 414
+ +P +Q +++ + +MDSMT +EL+ NP+ + S+ RIARGSG+
Sbjct: 354 GGGIKDQLPDDAMDVTQDRMRSFDIVMDSMTEDELE--NPRSIGASQTRRIARGSGQPEE 411
Query: 415 EVMEMLEEYKRLAKIWSKMKGL 436
V E+LE+++ + + + +G+
Sbjct: 412 RVQELLEQHRMMERTLKQFQGM 433
>gi|397779468|ref|YP_006543941.1| Signal recognition 54 kDa protein [Methanoculleus bourgensis MS2]
gi|396937970|emb|CCJ35225.1| Signal recognition 54 kDa protein AltName: Full=SRP54
[Methanoculleus bourgensis MS2]
Length = 442
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 165/424 (38%), Positives = 261/424 (61%), Gaps = 13/424 (3%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L LG S+ A+++++ T+ID ++E + ++ RALLQADV KLV ++ IK+
Sbjct: 1 MLDNLGASLKDAVKKLAGKTVIDRAAVDELVRDLQRALLQADVNVKLVMQLSQAIKQRAL 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKML-DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ G R + + ++ EL +++ PG + P+ I+ GLQGSGKTTT K
Sbjct: 61 DEEPPKGMGAREHVLRIVYQELVRLMGTPGAVTLGPQ-----TILMAGLQGSGKTTTTAK 115
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A + Q+KG + ++CADTFR GA+DQLK + +P +G E D ++I EG+ F+
Sbjct: 116 LARFFQRKGLRVGVICADTFRPGAYDQLKTLCDRISVPCFGDPKEPDALKIVREGLPRFR 175
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
K ++II+DT GRH E L EE+ ++E + + D V+D+++GQ A +QA+ F ++
Sbjct: 176 K-LYEVIIIDTQGRHALEEHLIEEIININEIS-HADHRWLVIDAALGQQASEQARRFHEA 233
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
+ + V+VTKMDG A+GGGALSAVA T+S ++FIG+GE +++ E F+ F+SRLLGMGD
Sbjct: 234 IGIDGVLVTKMDGTARGGGALSAVAETQSGIVFIGSGETIEDLERFNPDGFISRLLGMGD 293
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
+++ E V + + + +G FTLR MY+Q + + KMGP+ Q+ SMLP
Sbjct: 294 LKALVERAEEAVSAEDID--VNAMLKGKFTLRDMYKQLEALNKMGPLKQIMSMLP-LGGM 350
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEML 420
+P + K+ RY +MDSMT ELD +P ++ SR+ RIARG+G +V +++
Sbjct: 351 QIPDDAYDITSTKMARYKVIMDSMTPSELD--DPAVIGSSRVQRIARGAGVAPEDVRDLI 408
Query: 421 EEYK 424
+ YK
Sbjct: 409 KYYK 412
>gi|352681831|ref|YP_004892355.1| signal recognition particle subunit SRP54 [Thermoproteus tenax Kra
1]
gi|350274630|emb|CCC81275.1| signal recognition particle, subunit SRP54 [Thermoproteus tenax Kra
1]
Length = 439
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 166/424 (39%), Positives = 259/424 (61%), Gaps = 17/424 (4%)
Query: 11 SRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHN 70
S+ I ++ +DE+VL E E+ R+LL+ADV L++ + + + G
Sbjct: 9 SKLIDKIRGIDYLDEQVLTEITRELQRSLLKADVPLDLIKSFTDRAVQRMKEERPPPGIP 68
Query: 71 KRRIIQQAIFNELCKMLDPGKPSFT---PKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQK 127
+ + I++EL ++L G+ PK+ P VIM +G++GSGKTTT K A ++ K
Sbjct: 69 LKDYVIYIIYDELVRLLG-GEAEVNVGIPKR--PYVIMLLGVEGSGKTTTAAKIALFYLK 125
Query: 128 KGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLI 187
+G KP L+ DT R A+DQL+Q A K +PFYG D V IA G+ + K N DL+
Sbjct: 126 RGVKPGLIETDTIRPAAYDQLRQLAEKIGVPFYGEREGRDAVEIAKRGLASLK--NVDLV 183
Query: 188 IVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVI 247
IVDT+GRH+ E AL EE+R + EA V PD V+ V+D+++G+ A QA+AF + V V +V
Sbjct: 184 IVDTAGRHRNEQALLEEVRAIYEA-VKPDEVMLVVDATVGRQAAAQAEAFMKYVPVHSVA 242
Query: 248 VTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDK 307
+TKMD A+GGGAL+AVA T + V FIG GE +DE E+F+ + FV+R+LGMGD +++
Sbjct: 243 ITKMDSTARGGGALAAVAKTGARVKFIGVGEGVDELELFNARKFVARVLGMGDLESLVER 302
Query: 308 IHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGRE 367
+ V+ ++ ++L+ L G L +Q +LK+GP+ ++ +LPG + + + +
Sbjct: 303 VKAVL---EEEKILEDLESGRMDLLSFKKQLDALLKLGPLSKIMELLPGTLASKISEEQI 359
Query: 368 KESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLEEY---K 424
+ SQ +K++ ++ SMT EEL +P ++N SRI RIA G+G ++V +ML Y K
Sbjct: 360 ELSQKNLKKWRAILSSMTKEEL--KDPSILNASRIRRIAIGAGVTPKDVKDMLRAYEAMK 417
Query: 425 RLAK 428
R++K
Sbjct: 418 RMSK 421
>gi|448668329|ref|ZP_21686460.1| signal recognition particle protein Srp54 [Haloarcula amylolytica
JCM 13557]
gi|445768411|gb|EMA19496.1| signal recognition particle protein Srp54 [Haloarcula amylolytica
JCM 13557]
Length = 469
Score = 296 bits (758), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 163/443 (36%), Positives = 266/443 (60%), Gaps = 16/443 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ + + + + E+ + + + EI R+LLQADV LV+++ ++I+
Sbjct: 1 MVLDDLGSSLRGTLDDLRGKSRLSEEDIADIVKEIQRSLLQADVDVGLVQDLSSSIETRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG R + + ++ EL ++ G+ + P + + IM GL GSGKTTT K
Sbjct: 61 LEEEPPAGTTPRDWVLRIVYEELVDLV--GESTELPLEEQ--TIMLAGLYGSGKTTTAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KG +PA++ DT R GA+DQ K+ A +A++ FYG E DPV+IA +G+E
Sbjct: 117 MAWWFSTKGLRPAIIQTDTDRPGAYDQSKEMAERAEVDFYGDPDEDDPVKIARDGLEA-- 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
EN D+ IVDT+GR L E++ ++ E V PD + V+D+++GQ+A QA F+++
Sbjct: 175 TENADVRIVDTAGRDGLNEELIEQIERI-EQEVQPDRDLLVLDAAMGQSAKSQAADFEEA 233
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
+ + V++TK+DG AKGGGAL+AV T S + F+G+GE + + E F+ F+SRLLGMGD
Sbjct: 234 IGIDGVVITKLDGTAKGGGALAAVNETDSTIAFLGSGETVKDIERFEPSGFISRLLGMGD 293
Query: 301 WSGFMDKI----HEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPG 356
+++ E D++ + + EG FTL+ M +Q Q + MGP+ QV M+PG
Sbjct: 294 LKQLTERVERAMEETQEGDEEDWDPEDMLEGQFTLKDMRKQMQTMNNMGPLDQVMDMIPG 353
Query: 357 FSSELM---PKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQV 413
LM P +Q +++ + +MDSMT EEL+ NP+++ SR RI RGSG+
Sbjct: 354 LGGGLMDQLPDDAMDVTQERMRDFDVIMDSMTEEELE--NPRVVGQSRTRRICRGSGKPE 411
Query: 414 REVMEMLEEYKRLAKIWSKMKGL 436
V E+L+++K++ ++ + +G+
Sbjct: 412 ERVRELLQQHKQMEQMLKQFQGM 434
>gi|257052337|ref|YP_003130170.1| GTP-binding signal recognition particle SRP54 G- domain protein
[Halorhabdus utahensis DSM 12940]
gi|256691100|gb|ACV11437.1| GTP-binding signal recognition particle SRP54 G- domain protein
[Halorhabdus utahensis DSM 12940]
Length = 469
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 163/442 (36%), Positives = 265/442 (59%), Gaps = 15/442 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ A+ + + I E+ + + EI R+LLQADV LV ++ +I+
Sbjct: 1 MVLDDLGSSLRGALDGLRGKSRISEEDVQAVVKEIQRSLLQADVDVDLVMDLSDSIETRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG + R + + ++ EL ++ G+ + P + P I+ GLQGSGKTT+ K
Sbjct: 61 LEEEPPAGTSARDWVLRIVYEELVDLV--GESTELPLE--PQTIVLAGLQGSGKTTSAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KKG +PA++ DT+R GA++Q ++ A +A++ FYG E D V+IA +G+E
Sbjct: 117 IAWWFSKKGLRPAVIQTDTWRPGAYEQAEEMAERAEVDFYGDPDEDDAVKIARDGLEA-- 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
++ D+ IVDT+GRH E L +E+ + E+ +PD + V+D++IGQ A +QA F+ +
Sbjct: 175 TDDADVQIVDTAGRHALEDGLIDELEDI-ESVADPDHNLLVLDAAIGQEAKEQASRFEDA 233
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V + V++TK+DG AKGGGAL AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 234 VGIDGVVITKLDGTAKGGGALVAVNETDSTIAFLGTGETVKDVERFEPSGFISRLLGMGD 293
Query: 301 WSGFMDKIHEVVPMDQQPE---LLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGF 357
+++ + Q E + + +G FTL+ M +Q + + KMGP+ QV M+PG
Sbjct: 294 LQQLTERVERAMEETQAEEGDWGPEDMLDGEFTLKDMRKQMEAMNKMGPLDQVMDMIPGL 353
Query: 358 SSELM---PKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVR 414
+M P +Q +++ + +MDSMT EL+ NP+ + SR RIARGSG+
Sbjct: 354 GGGMMDQLPDDAMDVTQERMRDFEVIMDSMTEAELE--NPRQIGRSRTERIARGSGKPKD 411
Query: 415 EVMEMLEEYKRLAKIWSKMKGL 436
+ E+LE++K + + ++ +G+
Sbjct: 412 RIRELLEQHKMMDRTLNQFQGM 433
>gi|126465672|ref|YP_001040781.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Staphylothermus marinus F1]
gi|171769996|sp|A3DML3.1|SRP54_STAMF RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|126014495|gb|ABN69873.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Staphylothermus marinus F1]
Length = 441
Score = 295 bits (756), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 162/410 (39%), Positives = 260/410 (63%), Gaps = 4/410 (0%)
Query: 25 EKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELC 84
E+ + E + ++ + L++ADV KLV E+ I++ ++ G +R ++ EL
Sbjct: 21 ERAVKEFIRDLQKELIKADVNVKLVLELTKKIRERALKEEPPPGITRREWFVNIVYEELS 80
Query: 85 KMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGA 144
K K K KP V++ VGLQGSGKTTT K AYY++ +G++ LV ADT+R A
Sbjct: 81 KFFGGDKKPDIKPKKKPWVMLLVGLQGSGKTTTAAKLAYYYKLEGYRVGLVAADTYRPAA 140
Query: 145 FDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEE 204
+DQLKQ + +P YG D V IA GVE F D++IVDT+GRH +E L E
Sbjct: 141 YDQLKQLGEQIGVPVYGEPDNKDAVEIARRGVEYFVSRGFDIVIVDTAGRHHREEDLLRE 200
Query: 205 MRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAV 264
MR+++E + PD V+ V+D++IGQ A D A+ F ++ +G++IVTK+DG AKGGGALSAV
Sbjct: 201 MREIAE-NIKPDEVVLVIDAAIGQQAHDLAKKFHEATPIGSIIVTKLDGTAKGGGALSAV 259
Query: 265 AATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKL 324
A T + + FIGTGE +DE EVF FV+R+LG+GD G ++K+ + + ++ + L
Sbjct: 260 AVTGATIKFIGTGEKIDELEVFRPPRFVARILGIGDLEGLIEKVRRIKVEFTEKDVEEFL 319
Query: 325 SEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSM 384
S G +R++Y+Q ++ KMGP+ ++ M+PG S ++ + +++ KIK+++ +++SM
Sbjct: 320 S-GRLNMRLVYKQLVSLRKMGPLRKILQMIPGLSLKIPLEIEAGKAEEKIKKWLAIINSM 378
Query: 385 TNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMK 434
T EELD P++++ RI RIA G+G + +V E+L++Y+ + K+ +++
Sbjct: 379 TYEELD--KPEIIDRRRIRRIAYGAGVKPEDVRELLKQYEMMKKLSKQLR 426
>gi|448725559|ref|ZP_21708014.1| signal recognition particle protein Srp54 [Halococcus morrhuae DSM
1307]
gi|445798406|gb|EMA48821.1| signal recognition particle protein Srp54 [Halococcus morrhuae DSM
1307]
Length = 466
Score = 295 bits (755), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 164/441 (37%), Positives = 267/441 (60%), Gaps = 14/441 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ + ++ T +DE+ + E + EI R+L+QADV+ LV E+ I++
Sbjct: 1 MVLDDLGSSLRGTLDRLQGKTRLDEEDVEEVVREIQRSLIQADVEIDLVMELSDEIERRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ G R + + ++ E+ ++ G + P + + I+ GLQGSGKTTT K
Sbjct: 61 LEEEPPGGTTARDFVLRIVYEEMVDLV--GDSTELPLESQ--TILLAGLQGSGKTTTAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KKG +PA++ DTFR GA+DQ ++ A++A++ FYG DPV IA EG+
Sbjct: 117 MAWWFSKKGLRPAIIQTDTFRPGAYDQAEEMASRAEVSFYGDPDNDDPVEIAREGLAA-- 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
E D+ IVDT+GRH E L +E+ + + TV+PD + VMD++IGQ A DQAQ F+++
Sbjct: 175 TEEADVHIVDTAGRHALEEGLIDEIETIDD-TVDPDRRLLVMDAAIGQGAKDQAQRFEEA 233
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
+ V V++TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 234 IGVDGVVITKLDGTAKGGGALTAVNETDSSIAFLGTGETVQDVERFEPNGFISRLLGMGD 293
Query: 301 WSGFMDKIHEVVPM--DQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFS 358
+++ + +++ + + G FTL+ M Q + KMGP+ QV M+PG
Sbjct: 294 LKQLAERVERAMETGDEEEDWDPEDIMSGQFTLKDMRHQMNAMNKMGPLDQVLDMIPGLG 353
Query: 359 SEL---MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVRE 415
L +P +Q +++ + +MDSMT++EL+ NP+ + +++ R+ARGSG+
Sbjct: 354 GGLKDQLPDDAMDVTQDRMRSFEVVMDSMTDKELE--NPRSVGANQVRRVARGSGQPEER 411
Query: 416 VMEMLEEYKRLAKIWSKMKGL 436
V E+LE+++ + + + +G+
Sbjct: 412 VQELLEQHRMMERTLKQFQGM 432
>gi|448315945|ref|ZP_21505583.1| signal recognition particle protein Srp54 [Natronococcus jeotgali
DSM 18795]
gi|445610291|gb|ELY64065.1| signal recognition particle protein Srp54 [Natronococcus jeotgali
DSM 18795]
Length = 462
Score = 295 bits (755), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 165/448 (36%), Positives = 261/448 (58%), Gaps = 16/448 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ + ++ + + E+ + E + EI R+LL ADV LV E+ +I++
Sbjct: 1 MVLDDLGTSLRGTLDKLRGKSRVSEEDIGEIVKEIQRSLLSADVDVSLVMELSDSIERRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG R + + ++ EL ++ G+ + P + + I+ GLQGSGKTT+ K
Sbjct: 61 LEEEPPAGTPARDFVLRIVYEELVDLI--GESTDLPLEEQ--TILLAGLQGSGKTTSAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KG +PA++ DTFR GA+DQ K+ +A++ FYG DPV IA EG+E
Sbjct: 117 MAWWFSTKGLRPAVIQTDTFRPGAYDQAKEMTERAEVDFYGDPDADDPVEIAREGLEATS 176
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
+ D+ IVDT+GRH E L +E+ Q+ E V PD + V+D++IGQ A DQA+ F +S
Sbjct: 177 E--ADVHIVDTAGRHALEDDLIDEIEQI-EGVVEPDTSLLVLDAAIGQGAKDQARQFDES 233
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
+ + V++TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 234 IGIDGVVITKLDGTAKGGGALTAVDQTDSSIAFLGTGEEVQDVERFEPDGFISRLLGMGD 293
Query: 301 WSGFMDKI----HEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPG 356
+++ + D + + + G FTL M +Q + + MGP+ QV M+PG
Sbjct: 294 LGQLAERVERAMQQTDIEDDEEWDPEDMLTGQFTLNDMQKQMEAMNNMGPLDQVMDMIPG 353
Query: 357 FSS---ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQV 413
F + +P +Q +++ + +MDSMT+ E PK + S+I RIARGSG
Sbjct: 354 FGGGIKDQLPDDAMDVTQERMRTFSVIMDSMTDTE--KEYPKAIGASQIERIARGSGTSE 411
Query: 414 REVMEMLEEYKRLAKIWSKMKGLKIPKK 441
+V E+L++YK + + + +G+ K+
Sbjct: 412 EQVRELLQQYKMMERTIKQFQGMGSDKE 439
>gi|448738043|ref|ZP_21720074.1| signal recognition particle protein Srp54 [Halococcus thailandensis
JCM 13552]
gi|445802627|gb|EMA52931.1| signal recognition particle protein Srp54 [Halococcus thailandensis
JCM 13552]
Length = 465
Score = 295 bits (755), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 164/441 (37%), Positives = 267/441 (60%), Gaps = 14/441 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ + ++ T +DE+ + E + EI R+L+QADV+ LV E+ I++
Sbjct: 1 MVLDDLGSSLRGTLDRLQGKTRLDEEDVEEVVREIQRSLIQADVEIDLVMELSDEIERRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ G R + + ++ E+ ++ G + P + + I+ GLQGSGKTTT K
Sbjct: 61 LEEEPPGGTTARDFVLRIVYEEMVDLV--GDSTELPLESQ--TILLAGLQGSGKTTTAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KKG +PA++ DTFR GA+DQ ++ A++A++ FYG DPV IA EG+
Sbjct: 117 MAWWFSKKGLRPAIIQTDTFRPGAYDQAEEMASRAEVSFYGDPDNDDPVEIAREGLAA-- 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
E D+ IVDT+GRH E L +E+ + +ATV+PD + VMD++IGQ A DQAQ F+++
Sbjct: 175 TEEADVHIVDTAGRHALEEGLIDEIEAI-DATVDPDRRLLVMDAAIGQGAKDQAQRFEEA 233
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
+ V V++TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 234 IGVDGVVITKLDGTAKGGGALTAVNETDSSIAFLGTGETVQDVERFEPNGFISRLLGMGD 293
Query: 301 WSGFMDKIHEVVPM--DQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFS 358
+++ + +++ + + G FTL+ M Q + KMGP+ QV M+PG
Sbjct: 294 LKQLAERVERAMETGDEEEDWDPEDIMSGQFTLKDMRHQMNAMNKMGPLDQVLDMIPGLG 353
Query: 359 S---ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVRE 415
+ +P +Q +++ + +MDSMT +EL+ NP+ + +++ R+ARGSG+
Sbjct: 354 GGIKDQLPDDAMDVTQDRMRSFEVVMDSMTEKELE--NPRSVGANQVRRVARGSGQPEER 411
Query: 416 VMEMLEEYKRLAKIWSKMKGL 436
V E+LE+++ + + + +G+
Sbjct: 412 VQELLEQHRMMERTLKQFQGM 432
>gi|448689701|ref|ZP_21695285.1| signal recognition particle protein Srp54 [Haloarcula japonica DSM
6131]
gi|445777972|gb|EMA28932.1| signal recognition particle protein Srp54 [Haloarcula japonica DSM
6131]
Length = 470
Score = 295 bits (755), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 163/443 (36%), Positives = 264/443 (59%), Gaps = 16/443 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ + + + + E+ + + + EI R+LLQADV LV+++ +I+
Sbjct: 1 MVLDDLGSSLRGTLDDLRGKSRLSEEDIEDIVKEIQRSLLQADVDVGLVQDLSDSIETRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG R + + ++ EL ++ G+ + P + + IM GL GSGKTTT K
Sbjct: 61 LEEEPPAGTTPRDWVLRIVYEELVDLV--GESTELPLEEQ--TIMLAGLYGSGKTTTAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KG +PA++ DT R GA+DQ K+ A +A++ FYG E DPV+IA +G+E
Sbjct: 117 MAWWFSTKGLRPAIIQTDTDRPGAYDQSKEMAERAEVDFYGDPDEDDPVKIARDGLEA-- 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
EN D+ IVDT+GR L E++ ++ E V PD + V+D+++GQ+A QA F+ +
Sbjct: 175 TENADVRIVDTAGRDGLNEELIEQIERI-EQEVQPDRDLLVLDAAMGQSAKSQAADFEAA 233
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
+ + V++TK+DG AKGGGAL+AV T S + F+G+GE + + E F+ F+SRLLGMGD
Sbjct: 234 IGIDGVVITKLDGTAKGGGALAAVNETDSTIAFLGSGETVKDIERFEPSGFISRLLGMGD 293
Query: 301 WSGFMDKI----HEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPG 356
+++ E D++ + + EG FTL+ M +Q Q + MGP+ QV M+PG
Sbjct: 294 LKQLTERVERAMEETQEGDEEDWDPEDMLEGQFTLKDMRKQMQTMNNMGPLDQVMDMIPG 353
Query: 357 FSSELM---PKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQV 413
LM P +Q +++ + +MDSMT EEL+ NP+++ SR RI RGSG+
Sbjct: 354 LGGGLMDQLPDDAMDVTQERMRDFDVIMDSMTEEELE--NPRVVGQSRTRRICRGSGKPE 411
Query: 414 REVMEMLEEYKRLAKIWSKMKGL 436
V E+L+++K++ ++ + +G+
Sbjct: 412 ERVRELLQQHKQMEQMLKQFQGM 434
>gi|55379689|ref|YP_137539.1| signal recognition 54 kDa protein [Haloarcula marismortui ATCC
43049]
gi|448641490|ref|ZP_21678100.1| signal recognition particle protein Srp54 [Haloarcula sinaiiensis
ATCC 33800]
gi|448654753|ref|ZP_21681679.1| signal recognition particle protein Srp54 [Haloarcula californiae
ATCC 33799]
gi|74552458|sp|Q5UY20.1|SRP54_HALMA RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|55232414|gb|AAV47833.1| signal recognition 54 kDa protein [Haloarcula marismortui ATCC
43049]
gi|445760904|gb|EMA12160.1| signal recognition particle protein Srp54 [Haloarcula sinaiiensis
ATCC 33800]
gi|445766601|gb|EMA17728.1| signal recognition particle protein Srp54 [Haloarcula californiae
ATCC 33799]
Length = 469
Score = 295 bits (754), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 163/443 (36%), Positives = 264/443 (59%), Gaps = 16/443 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ + + + + E+ + + + EI R+LLQADV LV+++ +I+
Sbjct: 1 MVLDDLGSSLRGTLDDLRGKSRLSEEDIEDIVKEIQRSLLQADVDVGLVQDLSNSIETRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG R + + ++ EL ++ G+ + P + + IM GL GSGKTTT K
Sbjct: 61 LDEEPPAGTTPRDWVLRIVYEELVDLV--GESTELPLEEQ--TIMLAGLYGSGKTTTAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KG +PA++ DT R GA+DQ K+ A +A++ FYG E DPV+IA +G+E
Sbjct: 117 MAWWFSTKGLRPAIIQTDTDRPGAYDQSKEMAERAEVDFYGDPDEDDPVKIARDGLEA-- 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
EN D+ IVDT+GR L E++ ++ E V PD + V+D+++GQ+A QA F+ +
Sbjct: 175 TENADVRIVDTAGRDGLNEELIEQIERI-EQEVQPDRDLLVLDAAMGQSAKSQAADFEAA 233
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
+ + V++TK+DG AKGGGAL+AV T S + F+G+GE + + E F+ F+SRLLGMGD
Sbjct: 234 IGIDGVVITKLDGTAKGGGALAAVNETDSTIAFLGSGETVKDIERFEPSGFISRLLGMGD 293
Query: 301 WSGFMDKI----HEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPG 356
+++ E D++ + + EG FTL+ M +Q Q + MGP+ QV M+PG
Sbjct: 294 LKQLTERVERAMEETQEGDEEDWDPEDMLEGQFTLKDMRKQMQTMNNMGPLDQVMDMIPG 353
Query: 357 FSSELM---PKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQV 413
LM P +Q +++ + +MDSMT EEL+ NP+++ SR RI RGSG+
Sbjct: 354 LGGGLMDQLPDDAMDVTQERMQDFDVIMDSMTEEELE--NPRVVGQSRTKRICRGSGKPE 411
Query: 414 REVMEMLEEYKRLAKIWSKMKGL 436
V E+L+++K++ ++ + +G+
Sbjct: 412 ERVRELLQQHKQMEQMLKQFQGM 434
>gi|448445207|ref|ZP_21590262.1| signal recognition particle protein Srp54 [Halorubrum saccharovorum
DSM 1137]
gi|445685513|gb|ELZ37867.1| signal recognition particle protein Srp54 [Halorubrum saccharovorum
DSM 1137]
Length = 464
Score = 295 bits (754), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 163/442 (36%), Positives = 265/442 (59%), Gaps = 15/442 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ ++ ++ + + E + E + EI R+LL ADV LV E+ +IK
Sbjct: 1 MVLDDLGTSLRSSLDKLQGKSRLSESDVEEIVKEIQRSLLSADVDVSLVMELSDSIKTRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ G + + + ++ E+ ++ G + P + + I+ GLQGSGKTT+ K
Sbjct: 61 LEEEPPGGTTAKDHVLKIVYEEMVDLV--GDSTELPLENQ--TILLAGLQGSGKTTSAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KKG +PA++ DTFR GA+DQ K+ +A++ FYG+ DPV IA G+E +
Sbjct: 117 MAWWFSKKGLRPAVIQTDTFRPGAYDQAKEMCERAEVDFYGNPDNDDPVDIARTGLE--E 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
E+ D+ IVDT+GRH E L E+ ++ +A V+PD + V+D++IGQ A DQA+ F++S
Sbjct: 175 TEDADVHIVDTAGRHALEDDLIAEIEEIEQA-VDPDRSLLVLDAAIGQGAKDQARQFEES 233
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
+ + V++TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 234 IGIEGVMITKLDGTAKGGGALTAVNETDSSIAFLGTGETVQDIERFEPSGFISRLLGMGD 293
Query: 301 WSGFMDKIHEVVPMDQ---QPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLP-- 355
+++ + Q + + + +G FTL+ M +Q + +MGP+ QV M+P
Sbjct: 294 LKQLSERVERAMEEAQEEDEDWDPEDMLQGEFTLKDMKKQMDAMNRMGPLDQVMDMIPGM 353
Query: 356 -GFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVR 414
G + +P +Q +++R+ +MDSMT EEL+ NP+++ SR RIARGSG
Sbjct: 354 GGGMMDQLPDDAMDVTQDRMRRFERIMDSMTEEELE--NPRVVGQSRTERIARGSGTDEE 411
Query: 415 EVMEMLEEYKRLAKIWSKMKGL 436
V ++LE++ + + S+ +G+
Sbjct: 412 TVQQLLEQHSMMEQTISQFQGM 433
>gi|297526052|ref|YP_003668076.1| GTP-binding signal recognition particle SRP54 G- domain-containing
protein [Staphylothermus hellenicus DSM 12710]
gi|297254968|gb|ADI31177.1| GTP-binding signal recognition particle SRP54 G- domain protein
[Staphylothermus hellenicus DSM 12710]
Length = 444
Score = 294 bits (753), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 163/415 (39%), Positives = 260/415 (62%), Gaps = 7/415 (1%)
Query: 25 EKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELC 84
E+ + E + ++ + L++ADV +LV E+ I++ ++ G +R ++ EL
Sbjct: 24 ERAVKEFIRDLQKELIKADVNVRLVLELTKKIRERALEEEPPPGITRREWFINIVYEELS 83
Query: 85 KMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGA 144
K + K KP V++ VGLQGSGKTTT K AYY++ +G++ LV ADT+R A
Sbjct: 84 KFFGGDRKPDIKPKKKPWVMLLVGLQGSGKTTTAAKLAYYYKLEGYRVGLVTADTYRPAA 143
Query: 145 FDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEE 204
+DQLKQ + +P YG D V IA GVE F D++IVDT+GRH +E L +E
Sbjct: 144 YDQLKQLGEQIGVPVYGEPNNKDAVEIARRGVEYFVSRGFDIVIVDTAGRHHREEDLLKE 203
Query: 205 MRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAV 264
MR+++E + PD V+ V+D++IGQ A + A+ F + +G++IVTK+DG AKGGGALSAV
Sbjct: 204 MREIAE-NIKPDEVVLVIDAAIGQQAHNLAKKFHTATPIGSIIVTKLDGTAKGGGALSAV 262
Query: 265 AATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKL 324
A T + + FIGTGE +DE EVF FV+R+LG+GD G ++K+ + + ++ + L
Sbjct: 263 AVTGATIKFIGTGEKIDELEVFRPPRFVARILGIGDLEGLVEKVRRIKVEFTEKDVEEFL 322
Query: 325 SEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSM 384
S G +R++Y+Q ++ KMGP+ ++ M+PG S ++ + +++ KIK+++ +++SM
Sbjct: 323 S-GRLNMRLVYKQLVSLRKMGPLRKILQMIPGLSLKIPLEIEAGKAEEKIKKWLAIINSM 381
Query: 385 TNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLEEY---KRLAKIWSKMKGL 436
T EELD P++++ R RIA G+G + +V E+L++Y K+L+K K K L
Sbjct: 382 TYEELD--KPEIIDRRRTRRIAYGAGVKTEDVRELLKQYEMMKKLSKQLRKRKDL 434
>gi|448472202|ref|ZP_21601078.1| signal recognition particle protein Srp54 [Halorubrum aidingense
JCM 13560]
gi|445819992|gb|EMA69822.1| signal recognition particle protein Srp54 [Halorubrum aidingense
JCM 13560]
Length = 464
Score = 294 bits (752), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 162/442 (36%), Positives = 263/442 (59%), Gaps = 15/442 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ ++ ++ + + E + E + EI R+LL ADV LV E+ +IK
Sbjct: 1 MVLDDLGTSLRSSLDKLQGKSRLSESDVEEIVKEIQRSLLSADVDVSLVMELSDSIKTRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ G + + + ++ E+ ++ G + P + + I+ GLQGSGKTT+ K
Sbjct: 61 LEEEPPGGTTAKDHVLKIVYEEMVALV--GDSTDLPLENQ--TILLAGLQGSGKTTSAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KKG +PA++ DTFR GA+DQ KQ +A++ FYG DPV IA +G++
Sbjct: 117 MAWWFSKKGLRPAVIQTDTFRPGAYDQAKQMCERAEVEFYGDPDNDDPVDIARKGLDATA 176
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
+ D+ IVDT+GRH E L E+ ++ A V+PD + V+D++IGQ A +QA+ F+QS
Sbjct: 177 --DADVHIVDTAGRHALEDDLIAEIEEIERA-VDPDRSLLVLDAAIGQGAKEQARQFEQS 233
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
+ + V++TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 234 IGIEGVMITKLDGTAKGGGALTAVNETDSSIAFLGTGETVQDIERFEPSGFISRLLGMGD 293
Query: 301 WSGFMDKIHEVVPMDQ---QPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGF 357
+++ + Q + + + +G FTL+ M +Q + +MGP+ QV M+PG
Sbjct: 294 LKQLSERVERAMQEAQDEDEDWDPEDMLKGEFTLKDMKKQMDAMNRMGPLDQVMDMIPGL 353
Query: 358 SSELM---PKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVR 414
+M P +Q +++++ +MDSMT+EEL +NP+++ SR RIARGSG
Sbjct: 354 GGGMMDQLPDDAMDVTQDRMRKFERIMDSMTDEEL--TNPRVVGQSRTERIARGSGTDEE 411
Query: 415 EVMEMLEEYKRLAKIWSKMKGL 436
V ++LE++ + + S+ +G+
Sbjct: 412 TVRQLLEQHSMMEQTISQFQGM 433
>gi|448732200|ref|ZP_21714482.1| signal recognition particle protein Srp54 [Halococcus salifodinae
DSM 8989]
gi|445805112|gb|EMA55339.1| signal recognition particle protein Srp54 [Halococcus salifodinae
DSM 8989]
Length = 464
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 166/442 (37%), Positives = 265/442 (59%), Gaps = 15/442 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ + ++ T +DE+ + E + EI R+L+QADV+ LV E+ +I++
Sbjct: 1 MVLDDLGSSLRGTLDRLQGKTRLDEEDVEEVVREIQRSLIQADVEIDLVMELSDSIEQRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ G R + + ++ E+ +++ G+ + P + + I+ GLQGSGKTTT K
Sbjct: 61 LEEEPPGGTTARDFVLRIVYEEMVELV--GESTDLPLESQ--TILLAGLQGSGKTTTAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KKG +PA++ DTFR GA+DQ K+ A +A++ FYG DPV IA EG+
Sbjct: 117 MAWWFSKKGLRPAVIQTDTFRPGAYDQAKEMAERAEVTFYGDPDADDPVEIAREGLAA-- 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
E D+ IVDT+GRH E L +E++++ +A V PD + VMD+++GQ A DQAQ F+++
Sbjct: 175 TEEADIHIVDTAGRHALEEGLIDEIQEI-DAVVEPDRSLLVMDAALGQGAKDQAQRFEEA 233
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
+ + V +TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 234 IGIDGVAITKLDGTAKGGGALTAVNETDSSIAFLGTGETVQDVERFEPDGFISRLLGMGD 293
Query: 301 WSGFMDKIHEVVPMDQQPELL---QKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGF 357
+++ + E + + +G FTL+ M Q + KMGP+ QV M+PG
Sbjct: 294 LKQLAERVERAMADTDTDEEDWDPEDILDGQFTLKDMRHQMDAMNKMGPLDQVLDMIPGL 353
Query: 358 SSEL---MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVR 414
L +P +Q +++ + +MDSMT EL+ NP+ + S+ RIARGSG+
Sbjct: 354 GGGLKDQLPDDAMDVTQDRMRSFDIVMDSMTENELE--NPRSVGASQTRRIARGSGQPEE 411
Query: 415 EVMEMLEEYKRLAKIWSKMKGL 436
V E+LE+++ + + + +G+
Sbjct: 412 RVQELLEQHRMMEQTLKQFQGM 433
>gi|268323505|emb|CBH37093.1| signal recognition 54 kDa protein [uncultured archaeon]
Length = 443
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 176/433 (40%), Positives = 266/433 (61%), Gaps = 20/433 (4%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L +L S+ +I++++ A ID++ ++E + +I RALLQADV+ LV+E+ +I++
Sbjct: 1 MLGKLSSSLKESIRKIAKAKRIDKRTVDELVRDIQRALLQADVKISLVKELSDHIRERSL 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
+ + N R + + ++ EL ++ GK P K P IM VGL G+GKT++C K
Sbjct: 61 KEKMLL--NPREHVIKVVYEELINII--GKGVEVPLK--PQKIMMVGLHGAGKTSSCAKL 114
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFY-GSYTESDPVRIAVEGVETFK 180
A Y QKKG KPA++CAD +R GA DQL+Q K +PFY G + + +RI GV F
Sbjct: 115 ARYFQKKGLKPAVICADVYRPGASDQLRQLCDKIGVPFYDGQPEDRNVLRIVTSGVNEFD 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
K D+ I+DT+GRH E + +E+ + +AT P+ V+D+SIGQ A QA+AF +
Sbjct: 175 K--YDIKIIDTAGRHALEPEMIDEIMDIEKAT-KPEQRFIVLDASIGQQASVQAKAFDDA 231
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
+ + +I+TKMDG AKGGGALSAVA T S V FIGTGE +D+FE F+ F+SRLLGMGD
Sbjct: 232 IGITGIIITKMDGTAKGGGALSAVAETDSGVAFIGTGETVDDFEKFESDGFISRLLGMGD 291
Query: 301 WSGFMDKIHEVV-PMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLP--GF 357
+ E + P D ++L+ G FTL+ +Y Q + + KMGP ++ MLP G
Sbjct: 292 IKSLIAMAEESLNPEDVDVDILK----GKFTLKDLYMQLEALKKMGPFKKIMQMLPLGGL 347
Query: 358 SSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVM 417
++ + ++ K+K + MMDSMT +EL S PK+++ SR+ RIA GSG EV
Sbjct: 348 GVDI-NDSMSQITEDKLKCFKVMMDSMTEDEL--SEPKIISGSRLRRIAHGSGTSTAEVN 404
Query: 418 EMLEEYKRLAKIW 430
E+++ ++ + K+
Sbjct: 405 ELIKYHRMMQKMM 417
>gi|448679313|ref|ZP_21690150.1| signal recognition particle protein Srp54 [Haloarcula argentinensis
DSM 12282]
gi|445771411|gb|EMA22468.1| signal recognition particle protein Srp54 [Haloarcula argentinensis
DSM 12282]
Length = 469
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 162/443 (36%), Positives = 265/443 (59%), Gaps = 16/443 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ + + + + E+ + + + EI R+LLQADV LV+++ +I+
Sbjct: 1 MVLDDLGSSLRGTLDDLRGKSRLSEEDIEDIVKEIQRSLLQADVDVGLVQDLSDSIETRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG R + + ++ EL ++ G+ + P + + IM GL GSGKTTT K
Sbjct: 61 LDEEPPAGTTPRDWVLRIVYEELVDLV--GESTELPLEEQ--TIMLAGLYGSGKTTTAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KG +PA++ DT R GA+DQ K+ A +A++ FYG E DPV+IA +G+E
Sbjct: 117 MAWWFSTKGLRPAIIQTDTDRPGAYDQSKEMAERAEVDFYGDPDEDDPVKIARDGLEA-- 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
E+ D+ IVDT+GR L E++ ++ E V PD + V+D+++GQ+A QA F+++
Sbjct: 175 TESADVRIVDTAGRDGLNEELIEQIERI-EQEVQPDRDLLVLDAAMGQSAKSQAADFEEA 233
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
+ + V++TK+DG AKGGGAL+AV T S + F+G+GE + + E F+ F+SRLLGMGD
Sbjct: 234 IGIDGVVITKLDGTAKGGGALAAVNETDSTIAFLGSGETVKDIERFEPSGFISRLLGMGD 293
Query: 301 WSGFMDKI----HEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPG 356
+++ E D++ + + EG FTL+ M +Q Q + MGP+ QV M+PG
Sbjct: 294 LKQLTERVERAMEETQEGDEEDWDPEDMMEGKFTLKDMRKQMQTMNNMGPLDQVMDMIPG 353
Query: 357 FSSELM---PKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQV 413
LM P +Q +++ + +MDSMT EEL+ NP+++ SR RI RGSG+
Sbjct: 354 LGGGLMDQLPDDAMDVTQERMRDFDVIMDSMTEEELE--NPRVVGQSRTKRICRGSGKPE 411
Query: 414 REVMEMLEEYKRLAKIWSKMKGL 436
V E+L+++K++ ++ + +G+
Sbjct: 412 ERVRELLQQHKQMEQMLKQFQGM 434
>gi|344210686|ref|YP_004795006.1| signal recognition 54 kDa protein [Haloarcula hispanica ATCC 33960]
gi|343782041|gb|AEM56018.1| signal recognition 54 kDa protein [Haloarcula hispanica ATCC 33960]
Length = 470
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 162/443 (36%), Positives = 263/443 (59%), Gaps = 16/443 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ + + + + E+ + + + EI R+LLQADV LV+++ +I+
Sbjct: 1 MVLDDLGSSLRGTLDDLRGKSRLSEEDIEDIVKEIQRSLLQADVDVGLVQDLSDSIETRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG R + + ++ EL ++ G+ + P + + IM GL GSGKTTT K
Sbjct: 61 LEEEPPAGTTPRDWVLRIVYEELVDLV--GESTELPLEEQ--TIMLAGLYGSGKTTTAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KG +PA++ DT R GA+DQ K+ A +A++ FYG E DPV+IA +G+E
Sbjct: 117 MAWWFSTKGLRPAIIQTDTDRPGAYDQSKEMAERAEVDFYGDPDEDDPVKIARDGLEATA 176
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
N D+ IVDT+GR L E++ ++ E V PD + V+D+++GQ+A QA F+ +
Sbjct: 177 --NADVRIVDTAGRDGLNEELIEQIERI-EQEVQPDRDLLVLDAAMGQSAKSQAADFEAA 233
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
+ + V++TK+DG AKGGGAL+AV T S + F+G+GE + + E F+ F+SRLLGMGD
Sbjct: 234 IGIDGVVITKLDGTAKGGGALAAVNETDSTIAFLGSGETVKDIERFEPSGFISRLLGMGD 293
Query: 301 WSGFMDKI----HEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPG 356
+++ E D++ + + EG FTL+ M +Q Q + MGP+ QV M+PG
Sbjct: 294 LKQLTERVERAMEETQEGDEEDWDPEDMLEGQFTLKDMRKQMQTMNNMGPLDQVMDMIPG 353
Query: 357 FSSELM---PKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQV 413
LM P +Q +++ + +MDSMT EEL+ NP+++ SR RI RGSG+
Sbjct: 354 LGGGLMDQLPDDAMDVTQERMRDFDVIMDSMTEEELE--NPRVVGQSRTRRICRGSGKPE 411
Query: 414 REVMEMLEEYKRLAKIWSKMKGL 436
V E+L+++K++ ++ + +G+
Sbjct: 412 ERVRELLQQHKQMEQMLKQFQGM 434
>gi|448634293|ref|ZP_21674691.1| signal recognition particle protein Srp54 [Haloarcula vallismortis
ATCC 29715]
gi|445749266|gb|EMA00711.1| signal recognition particle protein Srp54 [Haloarcula vallismortis
ATCC 29715]
Length = 469
Score = 291 bits (746), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 162/443 (36%), Positives = 262/443 (59%), Gaps = 16/443 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ + + + + E+ + + + EI R+LLQADV LV+++ +I+
Sbjct: 1 MVLDDLGSSLRGTLDDLRGKSRLSEEDIEDIVKEIQRSLLQADVDVGLVQDLSDSIETRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG R + + ++ EL ++ G+ + P + + IM GL GSGKTTT K
Sbjct: 61 LEEEPPAGTTPRDWVLRIVYEELVDLV--GESTELPLEEQ--TIMLAGLYGSGKTTTAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KG +PA++ DT R GA+DQ K+ A +A++ FYG E DPV+IA +G+E
Sbjct: 117 MAWWFSTKGLRPAIIQTDTDRPGAYDQSKEMAERAEVDFYGDPDEDDPVKIARDGLEA-- 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
EN D+ IVDT+GR L E++ ++ E V PD + V+D+++GQ+A QA F+ +
Sbjct: 175 TENADVRIVDTAGRDGLNEELIEQIERI-EQEVQPDRDLLVLDAAMGQSAKSQAADFEDA 233
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
+ + V++TK+DG AKGGGAL+AV T S + F+G+GE + + E F+ F+SRLLGMGD
Sbjct: 234 IGIDGVVITKLDGTAKGGGALAAVNETDSTIAFLGSGETVKDIERFEPSGFISRLLGMGD 293
Query: 301 WSGFMDKI----HEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPG 356
+++ E D + + + EG FTL+ M +Q Q + MGP+ QV M+PG
Sbjct: 294 LKQLTERVERAMEETQEGDDEDWDPEDMLEGQFTLKDMRKQMQTMNNMGPLDQVMDMIPG 353
Query: 357 FSSELM---PKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQV 413
LM P +Q +++ + +MDSMT EL+ NP+++ SR RI RGSG+
Sbjct: 354 LGGGLMDQLPDDAMDVTQERMRDFDVIMDSMTEAELE--NPRVVGQSRTERICRGSGKPE 411
Query: 414 REVMEMLEEYKRLAKIWSKMKGL 436
V E+L+++K++ ++ + +G+
Sbjct: 412 ERVRELLQQHKQMEQMLKQFQGM 434
>gi|284163555|ref|YP_003401834.1| GTP-binding signal recognition particle SRP54 G- domain-containing
protein [Haloterrigena turkmenica DSM 5511]
gi|284013210|gb|ADB59161.1| GTP-binding signal recognition particle SRP54 G- domain protein
[Haloterrigena turkmenica DSM 5511]
Length = 463
Score = 291 bits (746), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 167/442 (37%), Positives = 262/442 (59%), Gaps = 15/442 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ + ++ + I E+ + E + EI R+LL ADV LV E+ NIK+
Sbjct: 1 MVLDDLGSSLRGTLDKLRGKSRISEEDIEEIVKEIQRSLLSADVDVSLVMELSDNIKERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG R + + ++ EL ++ G + P + + I+ GLQGSGKTT+ K
Sbjct: 61 LEEEPPAGTPARDFVLRIVYEELVDLI--GDSTELPLEEQ--TILLAGLQGSGKTTSAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KG +PA++ DTFR GA++Q K+ +A++ FYG+ DPV IA +G+E K
Sbjct: 117 MAWWFSTKGLRPAVIQTDTFRPGAYEQAKEMTQRAEVDFYGNPDNDDPVEIARKGLE--K 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
D+ IVDT+GRH E L +E+ ++ +PD + V+D++IGQ A DQAQ F +S
Sbjct: 175 TSEADVHIVDTAGRHALEDELIDEIEEIE-DVADPDTSLLVLDAAIGQGAKDQAQQFDES 233
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
+ + V++TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 234 IGIDGVVITKIDGTAKGGGALTAVDQTDSSIAFLGTGEEVQDIERFEPDGFISRLLGMGD 293
Query: 301 WSGFMDKIH---EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGF 357
+++ E M+++ + + +G+FTL M +Q + + MGP+ QV M+PGF
Sbjct: 294 LGQLAERVERAMEQTEMEEEDWDPEDMLQGSFTLHDMQKQMEAMNNMGPLDQVMDMIPGF 353
Query: 358 SS---ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVR 414
+ +P +Q +++ + +MDSMT E + PK + S+I RIARGSG
Sbjct: 354 GGGIKDQLPDDAMDVTQDRMRTFSVIMDSMT--EAEKEYPKAIGASQIERIARGSGTTEE 411
Query: 415 EVMEMLEEYKRLAKIWSKMKGL 436
EV E+L++YK + K + +G+
Sbjct: 412 EVRELLQQYKMMEKTIKQFQGM 433
>gi|170291202|ref|YP_001738018.1| GTP-binding signal recognition particle [Candidatus Korarchaeum
cryptofilum OPF8]
gi|170175282|gb|ACB08335.1| GTP-binding signal recognition particle SRP54 G- domain protein
[Candidatus Korarchaeum cryptofilum OPF8]
Length = 437
Score = 291 bits (745), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 174/434 (40%), Positives = 265/434 (61%), Gaps = 15/434 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL +LG S+ A+ ++ ++IDE +NE + E+ R+L++ADV KLV E+ IK+
Sbjct: 1 MVLEKLGSSLRNAVSKIMGKSVIDEAAVNEFVREVQRSLIEADVDVKLVLEISRRIKERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPS-VIMFVGLQGSGKTTTCT 119
+ G ++R + + ++ EL +L KP+ P + K + VIM VG++GSGKTTT
Sbjct: 61 LKESPPPGFSRRDLAVKILYEELTNLLGR-KPAEIPMESKKTNVIMMVGIEGSGKTTTVA 119
Query: 120 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
K A++ K+ K ++ AD R + Q++Q IP + S DPV I EG+E F
Sbjct: 120 KLAFWLSKRFGKVGIISADVMRPASKLQIEQ-LVGPDIPVF-SKESKDPVEIMREGIEFF 177
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQ 239
K+E + +I+DT+GRHK E++L E+ E + PDLVI +D +IGQAA+ QA+AF +
Sbjct: 178 KRERYNFVIIDTAGRHKDESSLMSELDAYRE--IGPDLVILTIDGTIGQAAYAQARAFAE 235
Query: 240 SVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMG 299
V VG VIVTK+DG AKGGGALSAVAA+ +P++FIGTGE +D+ E FD + FVSRLLG G
Sbjct: 236 KVPVGGVIVTKLDGAAKGGGALSAVAASGAPILFIGTGERVDDLERFDPERFVSRLLGGG 295
Query: 300 DWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSS 359
D +I E ++ L++++S+G F L E Q + K GP+ ++ M+PG
Sbjct: 296 DIIELAMRIEEAF---KESRLMERMSKGKFDLEDFREYIQQLGKAGPMEKLLEMVPGIGG 352
Query: 360 ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEM 419
+ + + ++ R++ +++SMT EE +P L+ SRI RIARGSG +EV ++
Sbjct: 353 RV----QLDVNSGEMDRWIAIINSMTPEE--RRDPSLIRGSRIERIARGSGVTAKEVRKL 406
Query: 420 LEEYKRLAKIWSKM 433
L+ Y + K+ M
Sbjct: 407 LKSYHQAKKLIESM 420
>gi|330834334|ref|YP_004409062.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Metallosphaera cuprina Ar-4]
gi|329566473|gb|AEB94578.1| signal recognition particle subunit FFH/SRP54 (srp54)
[Metallosphaera cuprina Ar-4]
Length = 446
Score = 291 bits (744), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 160/393 (40%), Positives = 247/393 (62%), Gaps = 18/393 (4%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
+ E + E+ ++L+ +DVQ KLV + IK+ + + + +R + +++EL +
Sbjct: 23 VEEFIKELQKSLISSDVQVKLVLSLTNKIKERLKKETPPSNLERREWFIKVVYDELSALF 82
Query: 88 DPGK-PSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFD 146
K P PK P VIM VG+QG+GKTTT K AY+++++G+K ALV AD +R A +
Sbjct: 83 GGDKEPEVNPK-SNPWVIMLVGVQGTGKTTTAGKLAYFYKRRGYKVALVGADVYRPAALE 141
Query: 147 QLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRH--KQEAALFEE 204
QL+Q + +P YG SD V I+ GV F E +LII+DT+GRH +E+ L +E
Sbjct: 142 QLRQIGKQINVPVYGEPDSSDAVGISERGVAKFLSERYELIIIDTAGRHGYGEESKLLDE 201
Query: 205 MRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAV 264
M+++ E V P+ V+ V+D+S+GQ AFD A+ F ++ +VG++I+TKMDG AKGGGALSAV
Sbjct: 202 MKEIYE-KVKPNEVVLVIDASLGQKAFDLAKKFHEASNVGSIIITKMDGTAKGGGALSAV 260
Query: 265 AATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKL 324
AAT + + FIG GE +DE EVF+ + FV+R+LGMGD ++K+ + ++ +
Sbjct: 261 AATGARIKFIGLGEKIDELEVFNPRRFVARILGMGDLEAIIEKMKATEEYESIQNKMKDV 320
Query: 325 SEG--NFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKI-----KRY 377
G TLR MY+Q + KMGP+ ++ ++PG + ++ G KE Q KI K++
Sbjct: 321 ISGKSKLTLRDMYKQIIAVRKMGPLSKILQLIPG--TNML--GDIKEDQVKIGEEKMKKW 376
Query: 378 MTMMDSMTNEELDSSNPKLMNDSRIMRIARGSG 410
+++M+SMT EELD NP +++ R+ RIA GSG
Sbjct: 377 ISIMNSMTYEELD--NPSIIDKQRMRRIAFGSG 407
>gi|345006190|ref|YP_004809043.1| Signal recognition 54 kDa protein [halophilic archaeon DL31]
gi|344321816|gb|AEN06670.1| Signal recognition 54 kDa protein [halophilic archaeon DL31]
Length = 462
Score = 290 bits (743), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 168/442 (38%), Positives = 268/442 (60%), Gaps = 15/442 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ + + + +DE+ + E + EI R+LLQADV+ LV E+ ++I++
Sbjct: 1 MVLDNLGSSLRGTMDTLRGKSRLDEEDVEEIVKEIQRSLLQADVEVDLVMELSSSIEERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ G + R I + ++ E+ +++ G+ + P + P +M GLQGSGKTTT K
Sbjct: 61 LNEEPPGGTSARDHILKIVYEEMVEVV--GESTEIPLE--PQTLMLSGLQGSGKTTTAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KKG +PA++ DTFR G++ Q KQ A A++ FYG DPV+IA +G+E
Sbjct: 117 IAWWFSKKGLRPAVIQTDTFRPGSYQQAKQMAENAEVEFYGDPDAEDPVQIARDGLEATS 176
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
+ D+ IVDT+GRH E L EE+ ++ A V+PD + V+D++IGQ A QA+ F +
Sbjct: 177 --DADVHIVDTAGRHALEDDLIEEIEEIERA-VDPDRNLLVLDAAIGQGAKAQAREFDDA 233
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
+ V V +TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 234 IGVDGVTITKLDGTAKGGGALTAVNETDSSIAFLGTGETVQDIERFEPNGFISRLLGMGD 293
Query: 301 WSGFMDKIHEVVPMDQQPE---LLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLP-- 355
+++ + Q+ E + + EGNFTL+ M Q + KMGP+ QV M+P
Sbjct: 294 LKQLSERVERAMAETQEGEDDWDPEDMLEGNFTLKDMQRQMDAMNKMGPLDQVMDMIPGM 353
Query: 356 -GFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVR 414
G + +P +Q +++ + +MDSMT+EEL+ +P+ + S++ RIARGSG
Sbjct: 354 GGGMMDQLPDDAMDVTQDRMRNFEVIMDSMTDEELE--DPRSIGASQVQRIARGSGTDEE 411
Query: 415 EVMEMLEEYKRLAKIWSKMKGL 436
V E+L+++K + + ++ +G+
Sbjct: 412 TVRELLQQHKMMDRTLNQFQGM 433
>gi|222478931|ref|YP_002565168.1| GTP-binding signal recognition particle SRP54 G- domain protein
[Halorubrum lacusprofundi ATCC 49239]
gi|254772972|sp|B9LT33.1|SRP54_HALLT RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|222451833|gb|ACM56098.1| GTP-binding signal recognition particle SRP54 G- domain protein
[Halorubrum lacusprofundi ATCC 49239]
Length = 464
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 162/442 (36%), Positives = 262/442 (59%), Gaps = 15/442 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ ++ ++ + + E + E + EI R+LL ADV LV E+ +IK
Sbjct: 1 MVLDDLGTSLRSSLDKLQGKSRLSESDVEEIVKEIQRSLLSADVDVSLVMELSDSIKTRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ G + + + ++ E+ +++ G + P + + I+ GLQGSGKTT+ K
Sbjct: 61 LEEEPPGGTTAKDHVLKIVYEEMVELV--GDSTELPLENQ--TILLAGLQGSGKTTSAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KKG +PA++ DTFR GA+DQ KQ +A++ FYG DPV IA EG+E
Sbjct: 117 MAWWFSKKGLRPAVIQTDTFRPGAYDQAKQMCERAEVDFYGDPDNDDPVAIAREGLEATA 176
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
+ D+ IVDT+GRH E L E+ ++ A V+PD + V+D++IGQ A +QA+ F++S
Sbjct: 177 --DADVHIVDTAGRHALEDDLIAEIEEIERA-VDPDRSLLVLDAAIGQGAKEQARQFEKS 233
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
+ + V++TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 234 IGIEGVMITKLDGTAKGGGALTAVNETDSSIAFLGTGETVQDIERFEPSGFISRLLGMGD 293
Query: 301 WSGFMDKIHEVVPMDQ---QPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLP-- 355
+++ + Q + + + +G FTL+ M Q + +MGP+ QV M+P
Sbjct: 294 LKQLSERVERAMAEAQEEDEDWDPEDMLQGEFTLKDMKRQMDAMNRMGPLDQVMDMIPGM 353
Query: 356 -GFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVR 414
G + +P +Q +++R+ +MDSMT+EEL+ P+++ SR RIARGSG
Sbjct: 354 GGGMMDQLPDDAMDVTQDRMRRFERIMDSMTDEELE--QPRVVGQSRTERIARGSGTDEE 411
Query: 415 EVMEMLEEYKRLAKIWSKMKGL 436
V ++LE++ + + S+ +G+
Sbjct: 412 TVRQLLEQHSMMEQTISQFQGM 433
>gi|448388336|ref|ZP_21565191.1| signal recognition particle protein Srp54 [Haloterrigena salina JCM
13891]
gi|445670472|gb|ELZ23072.1| signal recognition particle protein Srp54 [Haloterrigena salina JCM
13891]
Length = 464
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 166/442 (37%), Positives = 261/442 (59%), Gaps = 15/442 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ + ++ + I E+ + E + EI R+LL ADV LV E+ NIK+
Sbjct: 1 MVLDDLGSSLRGTLDKLRGKSRISEEDIEEIVKEIQRSLLSADVDVSLVMELSDNIKERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ AG R + + ++ EL ++ G + P + + I+ GLQGSGKTT+ K
Sbjct: 61 LEEEPPAGTPARDFVLRIVYEELVDLI--GDSTELPLEEQ--TILLAGLQGSGKTTSAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KG +PA++ DTFR GA++Q K+ +A++ FYG+ DPV IA +G+E +
Sbjct: 117 MAWWFSTKGLRPAVIQTDTFRPGAYEQAKEMTQRAEVDFYGNPDNDDPVEIARKGLE--E 174
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
D+ IVDT+GRH E L +E+ ++ +PD + V+D++IGQ A DQAQ F +S
Sbjct: 175 TSEADVHIVDTAGRHALEDELIDEIEEIE-DVADPDTSLLVLDAAIGQGAKDQAQQFDES 233
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
+ + V++TK+DG AKGGGAL+AV T S + F+GTGE + + E F+ F+SRLLGMGD
Sbjct: 234 IGIDGVVITKIDGTAKGGGALTAVDQTDSSIAFLGTGEEVQDIERFEPDGFISRLLGMGD 293
Query: 301 WSGFMDKIH---EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGF 357
+++ E M++ + + +G+FTL M +Q + + MGP+ QV M+PGF
Sbjct: 294 LGQLAERVERAMEQTEMEEDDWDPEDMLQGSFTLHDMQKQMEAMNNMGPLDQVMDMIPGF 353
Query: 358 SS---ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVR 414
+ +P +Q +++ + +MDSMT E + PK + S+I RIARGSG
Sbjct: 354 GGGIKDQLPDDAMDVTQDRMRTFSVIMDSMT--EAEKEYPKAIGASQIERIARGSGTTEE 411
Query: 415 EVMEMLEEYKRLAKIWSKMKGL 436
EV E+L++YK + K + +G+
Sbjct: 412 EVRELLQQYKMMEKTIKQFQGM 433
>gi|48477967|ref|YP_023673.1| signal recognition particle protein Srp54 [Picrophilus torridus DSM
9790]
gi|48430615|gb|AAT43480.1| signal recognition particle protein Srp54 [Picrophilus torridus DSM
9790]
Length = 456
Score = 288 bits (738), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 169/431 (39%), Positives = 257/431 (59%), Gaps = 21/431 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL L S+ +++S ++ ID++ + E +I RALL+ADV KLV + +++
Sbjct: 1 MVLENLSSSLKDVFKKISGSSYIDKETIKEVSKDIQRALLKADVNVKLVISLTNRLQERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ AG +++ I + I+ EL +L G+ S + KP IM VGL G+GKTTT K
Sbjct: 61 ATEKPPAGMSEQDFILKIIYEELLSIL--GEESRI--ELKPQTIMLVGLYGNGKTTTAGK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A + KKG L+ AD R GA++QL+Q + + FYG E DPV+I G++
Sbjct: 117 LARFFIKKGLSVGLIAADVHRPGAYEQLEQISKQVNSLFYGEKNEKDPVKIIKNGLDRLG 176
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
+ + I+DTSGR + L +E++++ + PD V++V+D+++GQ QA+ +
Sbjct: 177 --DAKVKIIDTSGRDSLDDELIDEIKRIKNE-IKPDEVLYVVDATLGQQVGPQAKVLNDA 233
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
VS+ VI+TKMDG KGGGALSAVA KSPV FIGTGEHM++FEVF+ + F+SRLLGMGD
Sbjct: 234 VSISGVIITKMDGTGKGGGALSAVAEIKSPVYFIGTGEHMEDFEVFNPRKFLSRLLGMGD 293
Query: 301 WSGFMDKIHEVVPMDQQPE-LLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSS 359
M+ + E +++ E L KL G F L+ MY+ ++ K G + ++F+ +P
Sbjct: 294 IDALMEAVKETNITEEEAEKSLDKLMSGKFNLKDMYDVWEKFSKPGLLKKIFNSMP---L 350
Query: 360 ELMPKGREKESQAKIKR-------YMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQ 412
+P G +K + ++I R Y ++DSMT EL+ NP ++N RI RI+ GSG+
Sbjct: 351 SRIPGG-DKLNDSEIDRANEKLNIYRVILDSMTYSELE--NPDIINAKRIKRISIGSGKD 407
Query: 413 VREVMEMLEEY 423
REV +L+EY
Sbjct: 408 EREVRALLKEY 418
>gi|305663445|ref|YP_003859733.1| GTP-binding signal recognition particle SRP54 G- domain
[Ignisphaera aggregans DSM 17230]
gi|304378014|gb|ADM27853.1| GTP-binding signal recognition particle SRP54 G- domain
[Ignisphaera aggregans DSM 17230]
Length = 453
Score = 288 bits (738), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 159/407 (39%), Positives = 255/407 (62%), Gaps = 8/407 (1%)
Query: 32 LNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKMLDPG- 90
+ E+ + LL+ADV KLV E+ NI++ + +K+ + +++EL +
Sbjct: 29 VKELQKTLLRADVNVKLVLELTKNIRERALKERPPPYISKQEWFIKIVYDELSSLFGGDI 88
Query: 91 KPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQ 150
KP P K P +IM VG+QGSGKTTT K AY++++ G++P L+C DT+R A++QL Q
Sbjct: 89 KPQVFPVK-TPYIIMLVGVQGSGKTTTAAKIAYFYKRYGYRPCLICTDTYRPAAYEQLYQ 147
Query: 151 NATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHK--QEAALFEEMRQV 208
+ + +PF G SDP+ IA + + N ++II+DT+GRH +E L +EM+ +
Sbjct: 148 LSKQIDVPFCGDPKSSDPIDIAKKCLSYCINNNTNIIIIDTAGRHGYGEEEYLLKEMQDI 207
Query: 209 SEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATK 268
++A VNPD V+ ++D+SIGQ A+D A F + +G++++TK+DG AKGGGALSAVAATK
Sbjct: 208 AKA-VNPDEVMLIIDASIGQKAYDLALRFHSATPIGSIVITKLDGTAKGGGALSAVAATK 266
Query: 269 SPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEV-VPMDQQPELLQKLSEG 327
+ + FIGTGE + E EVFD + FV R+LG+GD +DK+ + D + L + ++ G
Sbjct: 267 AIIKFIGTGEKIPELEVFDPRRFVGRILGLGDLPTLIDKLKSIERSSDLEKRLTKAIATG 326
Query: 328 NFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNE 387
+L +Y Q Q + K+GP+ ++ ++PG S + + K S+ K+ +++ +++SMT E
Sbjct: 327 KISLVDLYLQIQTMRKLGPLSKILQLIPGLSLLPVDDKQLKISEEKMDKWLAIINSMTYE 386
Query: 388 ELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMK 434
EL NP +++ SRI RIA GSG +V E+L+ Y+ + + MK
Sbjct: 387 EL--RNPNIIDKSRINRIAIGSGTTADDVKELLKYYELVNTMIKNMK 431
>gi|257075577|ref|ZP_05569938.1| signal recognition particle protein Srp54 [Ferroplasma acidarmanus
fer1]
Length = 457
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 178/470 (37%), Positives = 264/470 (56%), Gaps = 33/470 (7%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL L S+ ++++S ++ ID+ + E EI RALL+ADV KLV ++ +++
Sbjct: 1 MVLDNLSESLKSIMRKISGSSFIDKDTIKEVTKEIQRALLKADVNVKLVLKLTNTVQERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ AG + I + I+ EL K+L +F K P IM VGL G+GKTTT K
Sbjct: 61 LNEKPPAGMTAQDYIIRVIYEELLKILGT-DSNFDLK---PQTIMLVGLYGNGKTTTAGK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A KKG L+ AD R GAF+QL+Q + FYG E + ++I G++
Sbjct: 117 LARLFMKKGLSTGLIAADVHRPGAFEQLQQISGDVNCGFYGEKEEKNALKIVRNGIKEL- 175
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
E+ + I+DTSGR + L +E+ ++ E +NPD V+FV+D+++GQ A QA+ +
Sbjct: 176 -EDFKIKIIDTSGRDSLDQELIDEVHEIKEK-INPDTVLFVIDATLGQQAGPQAKTLHDA 233
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V++ VI+TKMDG K GGALSAVA +SPV FIGTGEHMD+ ++F+ K F+SRLLGMGD
Sbjct: 234 VNIDGVIITKMDGTGKAGGALSAVADIQSPVYFIGTGEHMDDIQIFNPKKFLSRLLGMGD 293
Query: 301 WSGFMDKIHEVVPMDQQPEL-LQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSS 359
M+ + E +++ E L KL G F L+ MY+ ++ K G + + F LP
Sbjct: 294 IDALMEVVKETNITEEEAEASLDKLMSGKFDLKDMYDVWEKFAKPGLLKKFFGALPLGK- 352
Query: 360 ELMPKGRE-KESQ-----AKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQV 413
MP G + ESQ K++ Y ++DSMT EL+ NP ++N RI RIA GSG+
Sbjct: 353 --MPGGNKLDESQLDQADEKLRLYRVILDSMTFYELE--NPDVLNAKRIKRIAAGSGQGE 408
Query: 414 REVMEMLEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQG 463
+ V ++L+EY + K M ++ +N N + M K +G
Sbjct: 409 KNVRQLLKEYNAMKK--------------NMKSIKKNRNFKKMLKTQLKG 444
>gi|13541823|ref|NP_111511.1| signal recognition particle protein Srp54 [Thermoplasma volcanium
GSS1]
gi|21362960|sp|Q979Y8.1|SRP54_THEVO RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|14325260|dbj|BAB60164.1| signal recognition particle protein srp54 [Thermoplasma volcanium
GSS1]
Length = 455
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 165/439 (37%), Positives = 258/439 (58%), Gaps = 13/439 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL L S+ I++++ +T ID+ + E ++ R LL+ADV + V + +++
Sbjct: 1 MVLESLSSSLRETIRKITGSTYIDKNTVKEISKDLQRILLKADVNVQTVLNITKEMERRA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ G + + + I+ EL K+L G+PS + KP IM VGL G GKTT+ K
Sbjct: 61 LEEKPPVGMAHQDYMVKIIYEELLKIL--GEPSNV--ELKPQTIMLVGLYGHGKTTSAGK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
+ + KKG L+ AD R A++QL+Q A FYG E DPV+I G+E K
Sbjct: 117 LSRFFMKKGLSAGLIAADVHRYAAYEQLQQIAESVNAKFYGDPKEKDPVKIIKNGLEVLK 176
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
+ + I+DTSGR ++ L EE+R++ EA V PD V+ V+D+++GQ A +++A +
Sbjct: 177 --DAQVKIIDTSGRDSLDSDLIEEIRRIKEA-VKPDQVLMVIDATMGQQAGPESKAINDA 233
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
V V +I+TKMDG AKGGGALSAVA + P+ FIGTGEHMD+ E+FD K F+SRLLG+GD
Sbjct: 234 VGVTGIIITKMDGTAKGGGALSAVAKMRVPIYFIGTGEHMDDMEIFDPKKFLSRLLGLGD 293
Query: 301 WSGFMDKIHEV-VPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFS- 358
+ + E + ++ + +KL G F L+ MY+ ++ + G + ++ LP
Sbjct: 294 LETLFETVKEANITEEEAQKSFEKLMTGKFNLKDMYDVWEKFSRPGLMKKLVDSLPLAKL 353
Query: 359 --SELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREV 416
S+ + + ++ K++RY +MDSMT +EL+ NP+++N RI RIARG+G + +V
Sbjct: 354 PGSQKINDDQILTAEQKLQRYRIIMDSMTFQELE--NPEIINAKRITRIARGAGVREEDV 411
Query: 417 MEMLEEYKRLAKIWSKMKG 435
+L+E+K + MKG
Sbjct: 412 RMLLKEFKAMKNNMKLMKG 430
>gi|159040882|ref|YP_001540134.1| GTP-binding signal recognition particle [Caldivirga maquilingensis
IC-167]
gi|157919717|gb|ABW01144.1| GTP-binding signal recognition particle SRP54 G- domain [Caldivirga
maquilingensis IC-167]
Length = 449
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 160/433 (36%), Positives = 261/433 (60%), Gaps = 16/433 (3%)
Query: 9 SISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKK-IVNLDDLAA 67
+I I ++ +T+IDE+ L L ++ RAL++ADV KLV E+ +I++ +L
Sbjct: 7 AIGSIISRIRGSTLIDEETLRSILRDLQRALIRADVDVKLVYELTKSIEEEFKEAKELPP 66
Query: 68 GHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQK 127
G + + ++ +L +L K K KP ++M VG +GSGKTTT K A ++ K
Sbjct: 67 GLTAKDYLVYLLYRKLTDLLGGDKEPDVEVKTKPYILMLVGTEGSGKTTTAGKLANFYIK 126
Query: 128 KGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLI 187
+G K L+ DT R GAFDQL+Q A + K F+G + + V IA G+ DLI
Sbjct: 127 RGLKVGLIETDTIRPGAFDQLRQLAERVKAMFFGDPSLGNAVNIAKAGLSRMISSKADLI 186
Query: 188 IVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVI 247
I+DT+GRH+ E L E++++ EA V P+ V+ V+D++ G+ QA+AF + V V ++
Sbjct: 187 IIDTAGRHRNEEELLSEVKEIYEA-VKPNEVMLVVDATNGKQVGAQAEAFSKYVPVNSIF 245
Query: 248 VTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDK 307
+TK+D AKGGGAL + T + + FIG GE +++ EVF+ + FV+RL+GMGD +DK
Sbjct: 246 ITKLDSTAKGGGALVSAVKTGARIKFIGNGEDIEDIEVFNPRRFVARLMGMGDVESLLDK 305
Query: 308 IHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGRE 367
+ M+++ E+L+ + G FTL + +Q + + K+GP+ ++ MLP LMP+ +E
Sbjct: 306 VK---AMEEEEEVLEDIETGKFTLLTLMKQLEAMGKLGPLSRILQMLP---MGLMPQLKE 359
Query: 368 ------KESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLE 421
+Q +++++++++ SMT EEL NP ++N SRI RIA+GSG R+V E+L
Sbjct: 360 LNDDQLMNAQDRMRKWLSILRSMTKEEL--LNPNILNASRIRRIAKGSGVTPRDVRELLR 417
Query: 422 EYKRLAKIWSKMK 434
Y ++++ S +K
Sbjct: 418 YYNEMSRMMSSLK 430
>gi|325968148|ref|YP_004244340.1| GTP-binding signal recognition particle SRP54 G- domain
[Vulcanisaeta moutnovskia 768-28]
gi|323707351|gb|ADY00838.1| GTP-binding signal recognition particle SRP54 G- domain
[Vulcanisaeta moutnovskia 768-28]
Length = 446
Score = 281 bits (719), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 151/433 (34%), Positives = 254/433 (58%), Gaps = 14/433 (3%)
Query: 9 SISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAG 68
+ + + ++ IDE L E L EI R LL+ADV +V + I++ + G
Sbjct: 9 AFTNLVNRIRGLNYIDEATLKEILREIQRILLRADVSADVVSSITKTIEERFRQEKPPQG 68
Query: 69 HNKRRIIQQAIFNELCKMLDPGK-PSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQK 127
+ + ++ EL K L + PS K +P +M +G++GSGKTTT K A ++ K
Sbjct: 69 ITSKEFLLYLLYQELVKALGGEEVPSVNISK-RPYKLMLIGIEGSGKTTTAAKLARFYIK 127
Query: 128 KGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLI 187
+ K L+ DT+R GA+ QLKQ A K FYG DP+ I G+E ++ DLI
Sbjct: 128 RNLKVGLIETDTYRPGAYYQLKQLAEKVNALFYGEEDSKDPIAILRHGLEYMQRNKVDLI 187
Query: 188 IVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVI 247
I+DT+GRH+ E L +E + + + PD V+ V+D++IG+ A Q +AF + V + +V
Sbjct: 188 IIDTAGRHRNEEELLKEAKAIYDEA-KPDEVMLVIDATIGRQAAAQTEAFMKYVPIHSVF 246
Query: 248 VTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDK 307
+TKMD AK GGAL++V + + + FIG GE +DE E+FD FVSRLLGMGD ++K
Sbjct: 247 LTKMDSTAKAGGALTSVIRSGARIKFIGIGEDIDEVEIFDANKFVSRLLGMGDLEALIEK 306
Query: 308 IHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPG------FSSEL 361
+ + +++ ++++++ EG L + +Q +I+K+GP+ ++ +LP + + +
Sbjct: 307 VRAI---EEEDKIMEEIEEGKINLLTIKKQIDSIMKLGPLSKIMELLPASMLPMQYRTVM 363
Query: 362 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLE 421
+ + + +Q ++R+ ++DSMT EEL NP+++N SRI RIA+G+G ++V E+L
Sbjct: 364 LDEEKVSNAQEMLRRWRHILDSMTKEEL--LNPEIINASRIRRIAKGAGVTSKDVKELLN 421
Query: 422 EYKRLAKIWSKMK 434
Y+ + K+ +++K
Sbjct: 422 YYQLMRKMVNQIK 434
>gi|156937833|ref|YP_001435629.1| signal recognition particle subunit FFH/SRP54 (srp54) [Ignicoccus
hospitalis KIN4/I]
gi|156566817|gb|ABU82222.1| signal recognition particle subunit FFH/SRP54 (srp54) [Ignicoccus
hospitalis KIN4/I]
Length = 442
Score = 281 bits (719), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 168/427 (39%), Positives = 269/427 (62%), Gaps = 7/427 (1%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
+ A+++ ++ E +N + E+ + L+++DV KLV ++ I++ + G
Sbjct: 5 VREAVKKFLRSSADYETSVNLFIKELQKTLIKSDVNVKLVLQLTKRIRERALKERPPPGA 64
Query: 70 NKRRIIQQAIFNELCKMLDPGK-PSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKK 128
++R + ++ EL + K P P K P VIM VG+QGSGKTTT K A +++ +
Sbjct: 65 SRRDWFVKIVYEELANLFGGDKEPELKPPK-VPWVIMMVGVQGSGKTTTAGKLARFYKVR 123
Query: 129 GWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLII 188
G++ ALV ADT+R GA DQL+Q A +AK+ FY + D V IA GVE K + ++II
Sbjct: 124 GYRVALVAADTYRPGAKDQLRQLAERAKVLFY-TEPGDDAVGIAKRGVEWAKSQGAEIII 182
Query: 189 VDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIV 248
VDT+GRHK EA L +EM+++SEA + PD V+ V+D+SIGQ A A+AF ++ +G+++V
Sbjct: 183 VDTAGRHKNEAELLKEMKEMSEA-IKPDEVMLVIDASIGQQAKALAEAFHKTTPIGSIVV 241
Query: 249 TKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKI 308
TK+DG AKGGGALSAVA T + + F+GTGE ++E E F K FV+R+LG+GD G ++++
Sbjct: 242 TKLDGTAKGGGALSAVAVTGATIKFVGTGEKLEELEPFKPKKFVARILGLGDLEGLLERL 301
Query: 309 HEVVPMDQQPELLQK-LSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGRE 367
+ D+ E+ QK L +G+ TL+ +Y Q ++ KMG + ++ MLPG L K
Sbjct: 302 KGLEEADKLEEISQKVLEKGDITLKDLYYQIVSVKKMGSLKKLLQMLPGVGLALNDKVLG 361
Query: 368 KESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLEEYKRLA 427
+ + +++ +++SMT EEL+ P +++ SR+ RIA GSG V++V E+L+ Y+
Sbjct: 362 QVDDKVLDKWLAILNSMTLEELE--KPNIIDRSRMRRIAIGSGTSVKDVEELLKHYQMTR 419
Query: 428 KIWSKMK 434
K+ ++K
Sbjct: 420 KMIRQLK 426
>gi|289548587|ref|YP_003473575.1| signal recognition particle protein [Thermocrinis albus DSM 14484]
gi|289182204|gb|ADC89448.1| signal recognition particle protein [Thermocrinis albus DSM 14484]
Length = 437
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 162/441 (36%), Positives = 252/441 (57%), Gaps = 17/441 (3%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L L S+A++++ N + EK LN+ L +I ALL+ADV + +V+ I++
Sbjct: 1 MLELLTDRFSKALERLRNTRKLTEKQLNDILRDIRMALLEADVDYDVVKTFLKRIRERAL 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
+DL + + ++ EL K+L K KKG ++FVGLQG+GKTTT K
Sbjct: 61 TEDLKNNLSPAESVLLTVYEELVKILGETKEDL--KKG---TVLFVGLQGTGKTTTVGKL 115
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKK 181
AYY + KG+K AL D R A QL++ A + ++P+Y + E DPV+IA V+ K
Sbjct: 116 AYYLKGKGFKVALTSTDVRRPAAILQLQRLAERVEVPYYSAEGEEDPVKIAQIAVKRAKD 175
Query: 182 ENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSV 241
E D +++DT+GR + L EE+R++ E TVNP +++V D+ GQ A A+ F ++V
Sbjct: 176 EGVDYLLLDTAGRLHIDEELMEELRRIKE-TVNPSEILYVADAMQGQEALRAAKTFHETV 234
Query: 242 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 301
+ V++TKMDG A+GG ALS A P+ F+G GE +++ E F R+LG+GD
Sbjct: 235 GLTGVVLTKMDGDARGGVALSVREALGVPIKFMGVGEKLEDIEPFYPDRVAQRILGLGDI 294
Query: 302 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPG---FS 358
+++ +V+P D+ L ++ +G F L M +Q + +L MGP+ ++ MLPG ++
Sbjct: 295 QSLVERAQQVIPEDEAQALAVRIMKGEFDLEDMLKQIRFVLNMGPLDKIIGMLPGLGQYA 354
Query: 359 SELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVME 418
L K + +KR ++ SMT EE NP ++N SR RIARGSG V EV +
Sbjct: 355 KHL------KLDEKLLKRKEAIILSMTKEE--RKNPAIINLSRKQRIARGSGTTVSEVNK 406
Query: 419 MLEEYKRLAKIWSKMKGLKIP 439
+L+EY+ K+ K+K K P
Sbjct: 407 LLKEYEEARKLIRKLKNAKGP 427
>gi|319790268|ref|YP_004151901.1| signal recognition particle protein [Thermovibrio ammonificans
HB-1]
gi|317114770|gb|ADU97260.1| signal recognition particle protein [Thermovibrio ammonificans
HB-1]
Length = 448
Score = 277 bits (709), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 163/440 (37%), Positives = 260/440 (59%), Gaps = 7/440 (1%)
Query: 6 LGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDL 65
L + AI+++ ID++ LN+ L EI ALL+ADV +K+V + +IK+ ++
Sbjct: 5 LAERVQSAIEKIGRKGRIDQETLNKGLREIKLALLEADVNYKVVSKFINDIKEKALGAEV 64
Query: 66 AAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYH 125
G N + + + +++EL + L G+ + K KP+VI+ +GLQGSGKTTT K A Y
Sbjct: 65 VKGVNPAQQLVKIVYDELVEALG-GEGAKLELKSKPAVILLIGLQGSGKTTTAAKLANYL 123
Query: 126 QKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCD 185
+K+G K L AD +R A QLK+ K +P + E D V+IA + ++ K+EN D
Sbjct: 124 KKQGKKVLLTSADVYRPAAMLQLKKLGDKIGVPVFLEEDEKDAVKIAKDALKKAKEENYD 183
Query: 186 LIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGA 245
++I+DT+GR + L EE +++ E T NPD V+FV+D+ GQ + + A+AF ++V +
Sbjct: 184 VLIIDTAGRLHIDEELLEEAKRIKEET-NPDEVLFVIDAMTGQESVNIAKAFNEAVGMTG 242
Query: 246 VIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFM 305
+++TKMD A+GG ALS T P+ F G GE +++F+ F SR+LGMGD +
Sbjct: 243 IVLTKMDSDARGGVALSVKGVTGKPIKFAGVGEKIEDFQPFYPDRVASRILGMGDIVSLV 302
Query: 306 DKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE-LMPK 364
+K EV+ + + +KL G FTL +Q Q I ++GP+ QV M+PG S+ ++ +
Sbjct: 303 EKAQEVIDEKEALSMQEKLLSGEFTLEDFRKQLQMIQRLGPLQQVIRMIPGLGSQKILKQ 362
Query: 365 GREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLEEYK 424
E K+KR +++SMT EE N ++N SR RIARGSG V+EV +L+++
Sbjct: 363 LEEVIDDKKLKRIEAIINSMTPEE--RRNHAIINASRKRRIARGSGTSVKEVDALLKQFV 420
Query: 425 RLAKIWSKMKGL--KIPKKG 442
++ +M+ + K+ KKG
Sbjct: 421 QMKMAMKQMRKMQKKLAKKG 440
>gi|307596389|ref|YP_003902706.1| GTP-binding signal recognition particle SRP54 G- domain-containing
protein [Vulcanisaeta distributa DSM 14429]
gi|307551590|gb|ADN51655.1| GTP-binding signal recognition particle SRP54 G- domain protein
[Vulcanisaeta distributa DSM 14429]
Length = 446
Score = 277 bits (709), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 144/432 (33%), Positives = 251/432 (58%), Gaps = 12/432 (2%)
Query: 9 SISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAG 68
+ + + ++ + IDE L E L EI R LL+ADV +V + I++ + G
Sbjct: 9 AFTNLVNRIRGLSYIDEATLKEVLREIQRILLRADVSADVVLSITKTIEERFRQEKPPQG 68
Query: 69 HNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKK 128
+ + ++ EL K L + +P +M +G++GSGKTT+ K A ++ K+
Sbjct: 69 ITSKEFLLYLLYQELVKALGGEEAPNVNVSKRPYKLMLIGVEGSGKTTSAAKLARFYIKR 128
Query: 129 GWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLII 188
+ L+ DT+R GA+ QLKQ A + FYG DP+ I G+E ++ DLII
Sbjct: 129 NLRVGLIETDTYRPGAYHQLKQLAERVNALFYGEENSKDPIAILRHGLEYMQRNRVDLII 188
Query: 189 VDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIV 248
+DT+GRH+ E L +E + + + PD V+ V+D+++G+ A Q +AF + V + +V +
Sbjct: 189 IDTAGRHRNEEELLKEAKAIYDEA-KPDEVMLVIDATVGRQAAAQTEAFMKYVPIHSVFL 247
Query: 249 TKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKI 308
TKMD AK GGAL++V + + + FIG GE +DE EVFD +VSRLLGMGD ++KI
Sbjct: 248 TKMDSTAKAGGALTSVIRSGARIKFIGVGEDIDEIEVFDANKYVSRLLGMGDLEALIEKI 307
Query: 309 HEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPG------FSSELM 362
+ +++ ++++++ EG L + +Q +I+K+GP+ ++ +LP + + ++
Sbjct: 308 RAI---EEESKIMEEIEEGKINLLTIKKQIDSIMKLGPLSKILELLPTSMLPMQYRAVML 364
Query: 363 PKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLEE 422
+ + +Q ++R+ ++DSMT EEL NP ++N SRI RIA+G+G ++V E+L
Sbjct: 365 DEEKMSNAQEMLRRWRHILDSMTKEEL--LNPDIINASRIRRIAKGAGVTPKDVKELLNY 422
Query: 423 YKRLAKIWSKMK 434
Y+ + ++ +++K
Sbjct: 423 YQLMKRMVNQIK 434
>gi|15791232|ref|NP_281056.1| signal recognition particle [Halobacterium sp. NRC-1]
gi|169236988|ref|YP_001690188.1| signal recognition particle 54K protein [Halobacterium salinarum
R1]
gi|12230636|sp|Q9HMN5.1|SRP54_HALSA RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|229558602|sp|B0R7X3.1|SRP54_HALS3 RecName: Full=Signal recognition particle 54 kDa protein;
Short=SRP54
gi|10581860|gb|AAG20536.1| signal recognition particle [Halobacterium sp. NRC-1]
gi|167728054|emb|CAP14842.1| signal recognition particle 54K protein [Halobacterium salinarum
R1]
Length = 460
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 162/442 (36%), Positives = 255/442 (57%), Gaps = 15/442 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL LG S+ + + + I E+ +++ + EI R+LLQADV LV ++ +I +
Sbjct: 1 MVLDDLGSSLRGTLDTLRGKSRISEEDVDKVVKEIQRSLLQADVDVDLVMDLSESITERS 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ G + R + + ++ EL ++ TP + IM GLQGSGKTTT K
Sbjct: 61 LEEEPPGGTSARDHVLRIVYEELVGLV----GDSTPIPLEEQTIMLAGLQGSGKTTTAAK 116
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A++ KKG +PA+V DTFR GA++Q + A +A++ FYG DPV+IA +G+
Sbjct: 117 MAWWFSKKGLRPAIVQTDTFRPGAYEQAAEMADRAEVDFYGEPDSDDPVQIARDGLAATA 176
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
+ D+ IVDT+GRH E L E+ + E V PD + V+D++IGQ A QA+ F S
Sbjct: 177 --DADVHIVDTAGRHALEDDLIAEI-EEIEGVVEPDRSLLVLDAAIGQGAKQQARQFDAS 233
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
+ + V +TK+DG AKGGG+L+AV T S + F+G+GE + + E F+ F+SRLLGMGD
Sbjct: 234 IGIDGVAITKLDGTAKGGGSLTAVNETDSTIAFLGSGETVQDIERFEPDSFISRLLGMGD 293
Query: 301 WSGFMDKIHEVVPMDQ---QPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGF 357
+++ + Q + + L +G FTL M +Q Q + MGP+ QV M+PG
Sbjct: 294 LKQLTERVERAMEETQDDDEDWDPEDLMKGEFTLHDMRKQMQAMDNMGPLDQVMDMIPGM 353
Query: 358 SSELM---PKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVR 414
LM P +Q +++ + +MDSMT E+ ++P+ + S+I RIARGSG+
Sbjct: 354 GGGLMDELPDDAMDVTQERMRGFEVIMDSMTEAEM--ADPRSVGASQIRRIARGSGQPED 411
Query: 415 EVMEMLEEYKRLAKIWSKMKGL 436
V E+L+++K +A+ + +G+
Sbjct: 412 RVRELLDQHKMMAQTMQQFQGM 433
>gi|294055143|ref|YP_003548801.1| signal recognition particle protein [Coraliomargarita akajimensis
DSM 45221]
gi|293614476|gb|ADE54631.1| signal recognition particle protein [Coraliomargarita akajimensis
DSM 45221]
Length = 453
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 160/424 (37%), Positives = 247/424 (58%), Gaps = 12/424 (2%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIK-KIV 60
+L L + A++ + + E+ + E L E+ +ALL ADV FK+ RE +N+K + V
Sbjct: 1 MLENLTDKLGSALRNLRGVGKLTEENMEEALKEVRKALLSADVHFKVAREFVSNVKEQCV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ L + +++I+ I +EL K+L G KK P IM VGL GSGKTT+ K
Sbjct: 61 GQEVLKSVTPGQQVIK-IIHDELVKLLGEGTTELEDKK--PLRIMMVGLHGSGKTTSSGK 117
Query: 121 YA-YYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
A Y +K+ ++PAL+ D +R A DQL+ + FYG E + V I G+E
Sbjct: 118 LANYLAKKRDYRPALIACDVYRPAAIDQLETLSQTVGCEFYGDREEKNVVTIGKRGLEAA 177
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQ 239
K + +LII DT+GR + + L EE++ + +A V PD V+ V D+++GQ A + A+ F +
Sbjct: 178 KAADANLIIFDTAGRLQIDEDLIEEIKDL-KAAVQPDEVLLVADAALGQEAVNVAKHFHE 236
Query: 240 SVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMG 299
+V V +I+TK+DG A+GG ALS T +P+ F+G GE +DEF+VF SR+LGMG
Sbjct: 237 AVDVTGIILTKLDGDARGGAALSMKTITDTPIKFMGIGEKVDEFDVFHPDRMASRILGMG 296
Query: 300 DWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSS 359
D ++K E + D+ + +K+ + F L +Q Q + KMG +G + SMLPG S
Sbjct: 297 DVVSLVEKAQETIDQDEAERMAEKMRKAEFDLNDFLKQMQQVKKMGSLGSIVSMLPGASG 356
Query: 360 ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEM 419
+ G E+E K+ R ++ SMT +E S P+L+ SR+ R+A+GSG QVREV +
Sbjct: 357 --IEIGDEEEK--KMARTEAIILSMTPKE--RSQPRLLKGSRLKRVAQGSGVQVREVNAL 410
Query: 420 LEEY 423
L+++
Sbjct: 411 LKQF 414
>gi|302349271|ref|YP_003816909.1| Signal recognition 54 kDa protein [Acidilobus saccharovorans
345-15]
gi|302329683|gb|ADL19878.1| Signal recognition 54 kDa protein [Acidilobus saccharovorans
345-15]
Length = 444
Score = 272 bits (695), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 159/415 (38%), Positives = 256/415 (61%), Gaps = 16/415 (3%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
+ E + ++ R L++ADV LV+ + I++ + G ++R + ++ EL K+
Sbjct: 23 VEEFIRDLQRELIRADVNVALVKRLSDAIRQRALEQEPPPGVSRRDWFLKIVYEELVKVF 82
Query: 88 ---DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGA 144
+P PS P+K P VI+ VG+QGSGKTTT K A ++ +G++ LV DT+R GA
Sbjct: 83 GGEEP--PSVEPRK-VPWVILLVGVQGSGKTTTAGKLARFYSARGYRVGLVETDTYRPGA 139
Query: 145 FDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHK--QEAALF 202
+QL+ A + FYG IA GV+ + +IIVDT+GRH E AL
Sbjct: 140 LEQLRTLAQMSGALFYGE-PAGRAEEIASRGVKELESRGAQVIIVDTAGRHGYGDEQALL 198
Query: 203 EEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALS 262
+EMR++++A V+PD V V+D++IGQ AFD A+ F ++ +G +IVTK+DG AKGGG LS
Sbjct: 199 DEMRRIADA-VSPDEVALVVDAAIGQRAFDLARRFHEATPIGTIIVTKLDGTAKGGGVLS 257
Query: 263 AVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQ 322
AVAAT + V F+GTGE +DE E FD + FVSR++G+GD ++++ E ++ ++++
Sbjct: 258 AVAATGARVKFVGTGEKVDELEPFDPQGFVSRIMGLGDIRSLLERVREAEAEERAVKVVE 317
Query: 323 K-LSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGRE--KESQAKIKRYMT 379
+ + +G +R +Y Q ++I ++GP+ +V MLP S+ + G E K + KI +++
Sbjct: 318 EDIEKGRVNMRTIYAQLKSIRRLGPLSRVLEMLP-LSTLPVKVGDEQVKLGEEKINKWLH 376
Query: 380 MMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMK 434
+++SMT EELD +P +++ SR+ RIA GSG V +V E+L YK + + ++K
Sbjct: 377 IIESMTYEELD--DPDIIDRSRMRRIAVGSGTTVNDVKELLAYYKSVKAVVKRLK 429
>gi|327310166|ref|YP_004337063.1| GTP-binding signal recognition particle SRP54 [Thermoproteus
uzoniensis 768-20]
gi|326946645|gb|AEA11751.1| GTP-binding signal recognition particle SRP54, G- domain protein
[Thermoproteus uzoniensis 768-20]
Length = 437
Score = 271 bits (694), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 158/420 (37%), Positives = 249/420 (59%), Gaps = 10/420 (2%)
Query: 11 SRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHN 70
S+ ++++ IDE+ L E E+ R+LL+ADV +VR + + + G
Sbjct: 9 SKLVEKIRGVEYIDEQTLQEISRELQRSLLKADVPLDMVRAFTDTAVRRIREERPPPGIP 68
Query: 71 KRRIIQQAIFNELCKMLD-PGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
+ + I+ EL K+L +P K +P VIM +G++GSGKTTT K A ++ K+G
Sbjct: 69 VKDFVIYVIYQELVKLLGGEAEPDLKLPK-RPYVIMLLGVEGSGKTTTAAKIALFYIKRG 127
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
K +V DT R A+DQLKQ A + FYG +D V IA G+E K DL++V
Sbjct: 128 LKVGVVETDTIRPAAYDQLKQLAERVGARFYGERDGNDAVGIARRGLEQMK--GVDLVLV 185
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
DT+GRHK E +L EE++ + +A + PD V+ V+D+++G+ A QA+AF + V + +V +T
Sbjct: 186 DTAGRHKNEQSLLEEVKAIYDA-IKPDEVMLVVDATVGRQAAAQAEAFMKYVPIHSVAIT 244
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
KMD A+GGGAL+AVA T + V FIG GE +DE E F + FV+R+LGMGD ++++
Sbjct: 245 KMDSTARGGGALAAVAKTGARVKFIGVGEGVDEIEPFSPRKFVARVLGMGDLETLVERVK 304
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
V ++ L++L G L +Q +LK+GP+ +V +LPG + + + +
Sbjct: 305 AVFEEEEV---LEELESGRLDLLTFKKQIDALLKLGPLSKVLELLPGTLASKISDEQIEL 361
Query: 370 SQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLEEYKRLAKI 429
SQ ++R+ ++ SMT EEL +P ++N SRI RIA G+G ++V +ML+ Y+ + K+
Sbjct: 362 SQKNLRRWRAILSSMTEEEL--RDPSILNASRIRRIAIGAGVTPKDVKDMLKVYESMKKM 419
>gi|67624587|ref|XP_668576.1| signal recognition particle protein SRP54 [Cryptosporidium hominis
TU502]
gi|54659796|gb|EAL38359.1| signal recognition particle protein SRP54 [Cryptosporidium hominis]
Length = 296
Score = 271 bits (694), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 148/296 (50%), Positives = 201/296 (67%), Gaps = 10/296 (3%)
Query: 205 MRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAV 264
M QV T NPD V+FVMDS IGQA +DQA AF +V VG+VI+TK+DGHAKGGGALSAV
Sbjct: 1 MEQVVMET-NPDDVVFVMDSHIGQACYDQAMAFCNAVDVGSVIITKLDGHAKGGGALSAV 59
Query: 265 AATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKL 324
AAT +P+IFIGTGEH DEFE F+ K FVSRLLG+GD SG M KI+EVVP+D+QP+++ +L
Sbjct: 60 AATGAPIIFIGTGEHFDEFEPFETKGFVSRLLGLGDISGLMAKINEVVPLDRQPDMVNRL 119
Query: 325 SEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSM 384
+G FTLR MYEQFQN+L MG + SM+PG ++ K E+ ++K++M +MDSM
Sbjct: 120 VQGIFTLRDMYEQFQNMLNMGSPSALLSMIPGMGPNILAKEDEQAGIERLKKFMVIMDSM 179
Query: 385 TNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKM--KGLKIPKKG 442
T ELD N K +N SR+ RI+RGSG ++V E+L ++K +K+ ++ GL
Sbjct: 180 TESELD--NEKTINASRVERISRGSGTSNQDVQELLSQHKMFSKMVGQIGKLGLGKKGGL 237
Query: 443 EMSALSRNMN--AQHMSKVLPQGMLKQIGGVGGLQNLMKQMG---STKDMMGMFGG 493
+MS++ +N Q M K + + K +GG + N+M++M + D MFGG
Sbjct: 238 DMSSIMKNPAQLIQKMQKAIDPRIFKHMGGAQNMMNMMREMDKFQGSPDFQKMFGG 293
>gi|423318442|ref|ZP_17296319.1| signal recognition particle protein [Lactobacillus crispatus
FB049-03]
gi|423321926|ref|ZP_17299797.1| signal recognition particle protein [Lactobacillus crispatus
FB077-07]
gi|405591380|gb|EKB64882.1| signal recognition particle protein [Lactobacillus crispatus
FB077-07]
gi|405595567|gb|EKB68947.1| signal recognition particle protein [Lactobacillus crispatus
FB049-03]
Length = 476
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 158/449 (35%), Positives = 246/449 (54%), Gaps = 11/449 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L I +A++ ++ + E+ +N+ EI ALL+ADV FK+V++ IKK
Sbjct: 1 MAFENLSERIQKALKNLTGKGKVSEEDINKASREIRLALLEADVNFKVVKDFIKTIKKEA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ N + + + + +L KM+ K P++IM VGLQG+GKTTT K
Sbjct: 61 LGKEVQESLNPGQQVIKIVNEQLTKMMGEEAVPLNKSKHIPTIIMMVGLQGTGKTTTVGK 120
Query: 121 YAYYHQK-KGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
AY+ QK + +P L+ D +R A DQLKQ + K+P Y E D +I +G+
Sbjct: 121 LAYHLQKTEKARPLLIAGDIYRPAAVDQLKQIGDQLKVPVYSEDGEKDVAKIVQDGLAEA 180
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQ 239
+K D +++DT+GR + + L EE+ +V + T +PD ++ V+D+ GQAA D A+ F +
Sbjct: 181 EKNKNDYVLIDTAGRLEIDEPLMEELERVKKVT-HPDNILLVVDAMTGQAATDVAKGFDE 239
Query: 240 SVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMG 299
+ V VI+TK+DG +GG ALS A T P++F G GE + + +VF SR+LGMG
Sbjct: 240 RLDVTGVILTKLDGDTRGGAALSIRAVTGKPILFTGQGEKLSDLDVFHPDRMASRILGMG 299
Query: 300 DWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSS 359
D ++K + + ++ +K+ E F +Q Q + KMGP+ Q+ M+PG S+
Sbjct: 300 DMLSLIEKAQQDYDAKEAEKVAEKMRENTFDFNDFVDQLQQVQKMGPLDQIMKMIPGLSN 359
Query: 360 ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEM 419
K + Q +I ++ SMT EE NP ++N SR RIA GSGR V EV M
Sbjct: 360 NPQLKNLNVD-QKQIDHTEAIVYSMTPEE--RENPDMLNPSRRRRIAAGSGRPVVEVNRM 416
Query: 420 LEEYKRLAKIWSKMKGLKIPKKGEMSALS 448
++++K++ + SKM KG M LS
Sbjct: 417 IKQFKQMRDMMSKM------SKGNMKGLS 439
>gi|256843368|ref|ZP_05548856.1| signal recognition particle protein [Lactobacillus crispatus
125-2-CHN]
gi|256849811|ref|ZP_05555242.1| signal recognition protein Ffh [Lactobacillus crispatus MV-1A-US]
gi|262046944|ref|ZP_06019904.1| signal recognition particle protein [Lactobacillus crispatus
MV-3A-US]
gi|293381186|ref|ZP_06627194.1| signal recognition particle protein [Lactobacillus crispatus 214-1]
gi|256614788|gb|EEU19989.1| signal recognition particle protein [Lactobacillus crispatus
125-2-CHN]
gi|256713300|gb|EEU28290.1| signal recognition protein Ffh [Lactobacillus crispatus MV-1A-US]
gi|260572926|gb|EEX29486.1| signal recognition particle protein [Lactobacillus crispatus
MV-3A-US]
gi|290922226|gb|EFD99220.1| signal recognition particle protein [Lactobacillus crispatus 214-1]
Length = 476
Score = 268 bits (686), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 157/449 (34%), Positives = 246/449 (54%), Gaps = 11/449 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L I +A++ ++ + E+ +N+ EI ALL+ADV FK+V++ IKK
Sbjct: 1 MAFENLSERIQKALKNLTGKGKVSEEDINKASREIRLALLEADVNFKVVKDFIKTIKKEA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ N + + + + +L KM+ K P++IM VGLQG+GKTTT K
Sbjct: 61 LGKEVQESLNPGQQVIKIVNEQLTKMMGEEAVPLNKSKHIPTIIMMVGLQGTGKTTTVGK 120
Query: 121 YAYYHQK-KGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
AY+ QK + +P L+ D +R A DQLKQ + K+P Y E D +I +G+
Sbjct: 121 LAYHLQKTEKARPLLIAGDIYRPAAVDQLKQIGDQLKVPVYSEDGEKDVAKIVQDGLAEA 180
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQ 239
+K D +++DT+GR + + L EE+ +V + T +PD ++ V+D+ GQAA D A+ F +
Sbjct: 181 EKNKNDYVLIDTAGRLEIDEPLMEELERVKKVT-HPDNILLVVDAMTGQAATDVAKGFDE 239
Query: 240 SVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMG 299
+ V VI+TK+DG +GG ALS A T P++F G GE + + +VF SR+LGMG
Sbjct: 240 RLDVTGVILTKLDGDTRGGAALSIRAVTGKPILFTGQGEKLSDLDVFHPDRMASRILGMG 299
Query: 300 DWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSS 359
D ++K + + ++ +K+ E F +Q Q + KMGP+ Q+ M+PG ++
Sbjct: 300 DMLSLIEKAQQDYDAKEAEKVAEKMRENTFDFNDFVDQLQQVQKMGPLDQIMKMIPGLAN 359
Query: 360 ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEM 419
K + Q +I ++ SMT EE NP ++N SR RIA GSGR V EV M
Sbjct: 360 NPQLKNLNVD-QKQIDHTEAIVYSMTPEE--RENPDMLNPSRRRRIAAGSGRPVVEVNRM 416
Query: 420 LEEYKRLAKIWSKMKGLKIPKKGEMSALS 448
++++K++ + SKM KG M LS
Sbjct: 417 IKQFKQMRDMMSKM------SKGNMKGLS 439
>gi|315425555|dbj|BAJ47216.1| signal recognition particle subunit SRP54 [Candidatus Caldiarchaeum
subterraneum]
gi|343484393|dbj|BAJ50047.1| signal recognition particle, subunit SRP54 [Candidatus
Caldiarchaeum subterraneum]
Length = 466
Score = 268 bits (685), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 152/425 (35%), Positives = 261/425 (61%), Gaps = 10/425 (2%)
Query: 3 LAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNL 62
+ +G S+ ++ + D+ + E + I R+LL ADV+ +LV+++ I+
Sbjct: 27 FSSMGRSLKEVFRKFLASPSADKSSVEELVRGIQRSLLMADVKVELVQKISERIRARAFE 86
Query: 63 DDLAAGHNKRRIIQQAIFNELCKMLDPGKPS-FTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
+ L G +++ + + ++ EL +L GKP+ F+ KP V+M +G+QG+GKTTT K
Sbjct: 87 EKLPPGVSRKDSVAKIVYEELINLLG-GKPAQFSTGGKKPYVVMLLGIQGTGKTTTAAKL 145
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKK 181
A Y + G+K +VCADT+R A+ QLK +IP YG ++PV IA +G+E FK+
Sbjct: 146 ANYLKVGGYKVGVVCADTYRPAAYQQLKHLLEPRQIPVYGEPENNNPVEIARKGLEHFKQ 205
Query: 182 ENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSV 241
D++I+DT+GRH+Q+ +L +EM+ + E + PD I V+D +IGQ A A AF ++
Sbjct: 206 MGVDVVIIDTAGRHRQQESLMDEMKML-EKELKPDENILVIDGTIGQQAGAHAAAFHKAT 264
Query: 242 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 301
VG++I+TK+D +GGGAL+AVA T +P+ F+G GE +++F+ F+ +++ LLGM D
Sbjct: 265 PVGSIIITKLDTSGRGGGALAAVAETGAPIKFVGVGESVEDFQPFNPSSYIASLLGMPDI 324
Query: 302 SGFMD--KIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSS 359
++ K+ E+ ++Q E + K G FTL M EQ ++ K+GP+ ++ + LP
Sbjct: 325 ESIVERVKLAELTADEKQFEAILK---GKFTLEDMVEQVNSLTKLGPLKKLLAKLPFPGI 381
Query: 360 ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEM 419
+ +P + +++Q +I+++ ++ SMT EE ++P +++ SRI RIA G+G R+V E+
Sbjct: 382 DALPDDQLEKAQDRIRKWNAIIKSMTAEE--KNDPSILDGSRIRRIAYGAGVLERDVREL 439
Query: 420 LEEYK 424
L Y+
Sbjct: 440 LRSYQ 444
>gi|315427553|dbj|BAJ49153.1| signal recognition particle subunit SRP54 [Candidatus Caldiarchaeum
subterraneum]
Length = 466
Score = 268 bits (684), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 153/425 (36%), Positives = 260/425 (61%), Gaps = 10/425 (2%)
Query: 3 LAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNL 62
+ +G S+ ++ + D+ + E + I R+LL ADV+ +LV+++ I+
Sbjct: 27 FSSMGRSLKEVFRKFLASPSADKSSVEELVRGIQRSLLMADVRVELVQKISERIRARAFE 86
Query: 63 DDLAAGHNKRRIIQQAIFNELCKMLDPGKPS-FTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
+ L G +++ + + ++ EL +L GKP+ F+ KP V+M +G+QG+GKTTT K
Sbjct: 87 EKLPPGVSRKDSVAKIVYEELINLLG-GKPAQFSTGGKKPYVVMLLGIQGTGKTTTAAKL 145
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKK 181
A Y + G+K +VCADT+R A+ QLK +IP YG ++PV IA +G+E FK+
Sbjct: 146 ANYLKVGGYKVGVVCADTYRPAAYQQLKHLLEPRQIPVYGEPENNNPVEIARKGLEHFKQ 205
Query: 182 ENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSV 241
D++I+DT+GRH+Q+ +L +EM+ + E + PD I V+D +IGQ A A AF ++
Sbjct: 206 MGVDVVIIDTAGRHRQQESLMDEMKML-EKELKPDENILVIDGTIGQQAGAHAAAFHKAT 264
Query: 242 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 301
VG++I+TK+D +GGGAL+AVA T +P+ F+G GE +++F+ F+ +++ LLGM D
Sbjct: 265 PVGSIIITKLDTSGRGGGALAAVAETGAPIKFVGVGESVEDFQPFNPSSYIASLLGMPDI 324
Query: 302 SGFMD--KIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSS 359
++ K+ E+ ++Q E + K G FTL M EQ ++ K+GP+ ++ + LP
Sbjct: 325 ESIVERVKLAELTADEKQFEAILK---GKFTLEDMVEQVNSLTKLGPLKKLLAKLPFPGM 381
Query: 360 ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEM 419
+ P + +++Q +IK++ ++ SMT EE ++P +++ SRI RIA G+G R+V E+
Sbjct: 382 DAFPDDQLEKAQDRIKKWNAIIKSMTAEE--KNDPSILDGSRIRRIAYGAGVLERDVREL 439
Query: 420 LEEYK 424
L Y+
Sbjct: 440 LRSYQ 444
>gi|70943367|ref|XP_741738.1| signal recognition particle 54 kDa protein [Plasmodium chabaudi
chabaudi]
gi|56520308|emb|CAH81656.1| signal recognition particle 54 kDa protein, putative [Plasmodium
chabaudi chabaudi]
Length = 279
Score = 268 bits (684), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 136/274 (49%), Positives = 189/274 (68%), Gaps = 11/274 (4%)
Query: 223 DSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDE 282
DS IGQ+ DQA AFK SV VG++I+TK+DGHAKGGGALSAV+A P+ FIGTGEH+++
Sbjct: 1 DSHIGQSCHDQAMAFKNSVKVGSIIITKIDGHAKGGGALSAVSAIGCPITFIGTGEHVND 60
Query: 283 FEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNIL 342
FE F+ K FVSRLLG+GD G + + EV+ +++QP+L+ ++++G F LR MY+QFQN+
Sbjct: 61 FEKFEAKSFVSRLLGLGDIDGLVSTLKEVIDIEKQPQLINRIAKGKFVLRDMYDQFQNVF 120
Query: 343 KMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRI 402
KMG + +V SM+PGF + L+ KG EKE KIK+YM +MDSMTNEELD P +NDSR
Sbjct: 121 KMGSLSKVMSMIPGFGTNLISKGTEKEGIDKIKKYMVIMDSMTNEELDCVKP--LNDSRC 178
Query: 403 MRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSK---V 459
+RI +GSG ++ ++ E+LE++K L K+ KM L + G M L RN Q MSK +
Sbjct: 179 IRICKGSGTRLSDIRELLEQFKFLQKMVLKMGKLGLRDNG-MGNLMRN-QKQFMSKMNNM 236
Query: 460 LPQGMLKQIGGVGGLQNLMKQMGSTKDMMGMFGG 493
+ M +GG + N++K++ D FGG
Sbjct: 237 MDPNMFNNMGGANNMVNMLKELTKMDD----FGG 266
>gi|295693164|ref|YP_003601774.1| signal recognition particle protein ffh [Lactobacillus crispatus
ST1]
gi|295031270|emb|CBL50749.1| Signal recognition particle protein Ffh [Lactobacillus crispatus
ST1]
Length = 476
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 157/449 (34%), Positives = 244/449 (54%), Gaps = 11/449 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L I +A++ ++ + E+ +N EI ALL+ADV FK+V++ IKK
Sbjct: 1 MAFENLSERIQKALKNLTGKGKVSEEDINRASREIRLALLEADVNFKVVKDFIKTIKKEA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ N + + + + +L KM+ K P++IM VGLQG+GKTTT K
Sbjct: 61 LGKEVQESLNPGQQVIKIVNEQLTKMMGEEAVPLNKSKHIPTIIMMVGLQGTGKTTTVGK 120
Query: 121 YAYYHQK-KGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
AY+ QK + +P L+ D +R A DQLKQ + K+P Y E D +I +G+
Sbjct: 121 LAYHLQKTEKARPLLIAGDIYRPAAVDQLKQIGDQLKVPVYSEDGEKDVAKIVQDGLAEA 180
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQ 239
+K D +++DT+GR + + L EE+ +V + +PD ++ V+D+ GQAA D A+ F +
Sbjct: 181 EKNKNDYVLIDTAGRLEIDEPLMEELERVKK-VAHPDNILLVVDAMTGQAATDVAKGFDE 239
Query: 240 SVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMG 299
+ V VI+TK+DG +GG ALS A T P++F G GE + + +VF SR+LGMG
Sbjct: 240 RLDVTGVILTKLDGDTRGGAALSIRAVTGKPILFTGQGEKLSDLDVFHPDRMASRILGMG 299
Query: 300 DWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSS 359
D ++K + + ++ +K+ E F +Q Q I KMGP+ Q+ M+PG ++
Sbjct: 300 DMLSLIEKAQQDYDAKEAEKVAEKMRENTFDFNDFVDQLQQIQKMGPLDQIMKMIPGLAN 359
Query: 360 ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEM 419
K + Q +I ++ SMT EE NP ++N SR RIA GSGR V EV M
Sbjct: 360 NPQLKNLNVD-QKQIDHTEAIVYSMTPEE--RENPDMLNPSRRRRIAAGSGRPVVEVNRM 416
Query: 420 LEEYKRLAKIWSKMKGLKIPKKGEMSALS 448
++++K++ + SKM KG M LS
Sbjct: 417 IKQFKQMRDMMSKM------SKGNMKGLS 439
>gi|325294335|ref|YP_004280849.1| signal recognition particle protein [Desulfurobacterium
thermolithotrophum DSM 11699]
gi|325064783|gb|ADY72790.1| signal recognition particle protein [Desulfurobacterium
thermolithotrophum DSM 11699]
Length = 448
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 158/419 (37%), Positives = 240/419 (57%), Gaps = 5/419 (1%)
Query: 6 LGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDL 65
L + AI+++ IDE+ L + L EI ALL+ADV +++V +IK+ +
Sbjct: 5 LAEKVQSAIEKIGRKGRIDEETLEKGLREIKLALLEADVNYRVVSNFIKDIKEKALGAKV 64
Query: 66 AAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYH 125
G N + + + + +EL + L G+ KGKPSVI+ +GLQGSGKTTT K A Y
Sbjct: 65 IKGVNPAQQLVKIVHDELVQTLG-GEAEKLNLKGKPSVILLIGLQGSGKTTTAAKLANYL 123
Query: 126 QKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCD 185
+K+G + L D +R A QLK+ + IP + E D V+IA + + K E+ D
Sbjct: 124 KKQGKRVLLTSVDVYRPAAMLQLKKLGDQIGIPVFLEEKEKDAVKIAKDALLKAKDESYD 183
Query: 186 LIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGA 245
+++VDT+GR + L EE R++ E V PD +FV+DS GQ + + A+AF + V +
Sbjct: 184 VLVVDTAGRLHIDEELLEEARKIKEEVV-PDETLFVIDSMTGQESVNIAKAFDERVGMTG 242
Query: 246 VIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFM 305
+++TKMD A+GG ALS T P+ F G GE +D+FE F SR+LGMGD +
Sbjct: 243 IVLTKMDSDARGGVALSVKGVTGKPIKFAGVGEKIDDFEPFYPDRVASRILGMGDIVSLV 302
Query: 306 DKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKG 365
+K EV+ + + +KL G FTL +Q + I ++GP+ Q+ M+PG SS+ M K
Sbjct: 303 EKAQEVIDEKEALSMQEKLLSGEFTLEDFRQQLRMIQRLGPLQQIIRMIPGLSSQKMLKQ 362
Query: 366 REKE-SQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLEEY 423
EK K+KR +++SMT EE N ++N SR RIA+GSG V+EV +++++
Sbjct: 363 LEKAIDDKKLKRIEAIINSMTPEE--RRNHAIINASRKRRIAKGSGTSVKEVDALIKQF 419
>gi|325957087|ref|YP_004292499.1| signal recognition particle protein [Lactobacillus acidophilus
30SC]
gi|325333652|gb|ADZ07560.1| signal recognition particle protein [Lactobacillus acidophilus
30SC]
Length = 476
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 155/449 (34%), Positives = 246/449 (54%), Gaps = 11/449 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L I +A++ ++ + E+ +N+ EI ALL+ADV FK+V++ IKK
Sbjct: 1 MAFENLSERIQKALKNLTGKGKVSEEDINKASREIRLALLEADVNFKVVKDFIKTIKKEA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ N + + + + +L KM+ K P++IM VGLQG+GKTTT K
Sbjct: 61 LGKEVQESLNPGQQVIKIVNEQLTKMMGEEAVPLNKSKHIPTIIMMVGLQGTGKTTTVGK 120
Query: 121 YAYYHQK-KGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
AY+ QK + +P L+ D +R A DQLKQ + K+P Y E D +I +G+
Sbjct: 121 LAYHLQKTEKARPLLIAGDIYRPAAVDQLKQIGEQLKVPVYSEDGEKDVAKIVQDGLAEA 180
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQ 239
+K D +++DT+GR + + L EE+ +V + NPD ++ V+D+ GQAA D A+ F +
Sbjct: 181 EKNKNDYVLIDTAGRLEIDEPLMEELERVKKVA-NPDNILLVVDAMTGQAATDVAKGFDE 239
Query: 240 SVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMG 299
+ V VI+TK+DG +GG ALS A T P++F G GE + + +VF SR+LGMG
Sbjct: 240 RLDVTGVILTKLDGDTRGGAALSIRAVTGKPILFTGQGEKLSDLDVFHPDRMASRILGMG 299
Query: 300 DWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSS 359
D ++K + + ++ +K+ E F +Q + + KMGP+ Q+ M+PG ++
Sbjct: 300 DMLSLIEKAQQDYDAKEAQKVAEKMRENTFDFNDFVDQLEQVQKMGPLDQIMKMIPGLAN 359
Query: 360 ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEM 419
K + Q +I ++ SMT EE NP ++N SR RIA GSGR V EV M
Sbjct: 360 NPQLKNLNVD-QKQIDHTEAIVYSMTEEE--RENPDILNPSRRRRIAAGSGRPVVEVNRM 416
Query: 420 LEEYKRLAKIWSKMKGLKIPKKGEMSALS 448
++++K++ ++ SK+ KG M LS
Sbjct: 417 IKQFKQMREMMSKV------TKGNMKGLS 439
>gi|315038606|ref|YP_004032174.1| signal recognition particle protein [Lactobacillus amylovorus GRL
1112]
gi|385817872|ref|YP_005854262.1| signal recognition particle protein [Lactobacillus amylovorus
GRL1118]
gi|312276739|gb|ADQ59379.1| signal recognition particle protein [Lactobacillus amylovorus GRL
1112]
gi|327183810|gb|AEA32257.1| signal recognition particle protein [Lactobacillus amylovorus
GRL1118]
Length = 476
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 155/449 (34%), Positives = 246/449 (54%), Gaps = 11/449 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L I +A++ ++ + E+ +N+ EI ALL+ADV FK+V++ IKK
Sbjct: 1 MAFENLSERIQKALKNLTGKGKVSEEDINKASREIRLALLEADVNFKVVKDFIKTIKKEA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ N + + + + +L KM+ K P++IM VGLQG+GKTTT K
Sbjct: 61 LGKEVQESLNPGQQVIKIVNEQLTKMMGEEAVPLNKSKHIPTIIMMVGLQGTGKTTTVGK 120
Query: 121 YAYYHQK-KGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
AY+ QK + +P L+ D +R A DQLKQ + K+P Y E D +I +G+
Sbjct: 121 LAYHLQKTEKARPLLIAGDIYRPAAVDQLKQIGEQLKVPVYSEDGEKDVAKIVQDGLAEA 180
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQ 239
+K D +++DT+GR + + L EE+ +V + NPD ++ V+D+ GQAA D A+ F +
Sbjct: 181 EKNKNDYVLIDTAGRLEIDEPLMEELERVKKVA-NPDNILLVVDAMTGQAATDVAKGFDE 239
Query: 240 SVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMG 299
+ V VI+TK+DG +GG ALS A T P++F G GE + + +VF SR+LGMG
Sbjct: 240 RLDVTGVILTKLDGDTRGGAALSIRAVTGKPILFTGQGEKLSDLDVFHPDRMASRILGMG 299
Query: 300 DWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSS 359
D ++K + + ++ +K+ E F +Q + + KMGP+ Q+ M+PG ++
Sbjct: 300 DMLSLIEKAQQDYDAKEAQKVAEKMRENTFDFNDFVDQLEQVQKMGPLDQIMKMIPGLAN 359
Query: 360 ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEM 419
K + Q +I ++ SMT EE NP ++N SR RIA GSGR V EV M
Sbjct: 360 NPQLKNLSVD-QKQIDHTEAIVYSMTEEE--RENPDILNPSRRRRIAAGSGRPVVEVNRM 416
Query: 420 LEEYKRLAKIWSKMKGLKIPKKGEMSALS 448
++++K++ ++ SK+ KG M LS
Sbjct: 417 IKQFKQMREMMSKV------TKGNMKGLS 439
>gi|227878849|ref|ZP_03996756.1| Sec family type I general secretory pathway protein signal
recognition particle protein [Lactobacillus crispatus
JV-V01]
gi|227861597|gb|EEJ69209.1| Sec family type I general secretory pathway protein signal
recognition particle protein [Lactobacillus crispatus
JV-V01]
Length = 476
Score = 266 bits (679), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 155/449 (34%), Positives = 245/449 (54%), Gaps = 11/449 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L I +A++ ++ + E+ +N+ EI ALL+ADV FK+V++ IKK
Sbjct: 1 MAFENLSERIQKALKNLTGKGKVSEEDINKASREIRLALLEADVNFKVVKDFIKTIKKEA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ N + + + + +L KM+ K P++IM VGLQG+GKTTT K
Sbjct: 61 LGKEVQESLNPGQQVIKIVNEQLTKMMGEEAVPLNKSKHIPTIIMMVGLQGTGKTTTVGK 120
Query: 121 YAYYHQK-KGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
AY+ QK + +P L+ D +R A DQLKQ + K+P Y E D +I +G+
Sbjct: 121 LAYHLQKTEKARPLLIAGDIYRPAAVDQLKQIGDQLKVPVYSEDGEKDVAKIVQDGLAEA 180
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQ 239
+K D +++DT+GR + + L EE+ +V + +PD ++ V+D+ GQAA D A+ F +
Sbjct: 181 EKNKNDYVLIDTAGRLEIDEPLMEELERVKK-VAHPDNILLVVDAMTGQAATDVAKGFDE 239
Query: 240 SVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMG 299
+ + VI+TK+DG +GG ALS A T P++F G GE + + +VF SR+LGMG
Sbjct: 240 RLDITGVILTKLDGDTRGGAALSIRAVTGKPILFTGQGEKLSDLDVFHPDRMASRILGMG 299
Query: 300 DWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSS 359
D ++K + + ++ +K+ E F +Q Q + KMGP+ Q+ M+PG ++
Sbjct: 300 DMLSLIEKAQQDYDAKEAEKVAEKMRENTFDFNDFVDQLQQVQKMGPLDQIMKMIPGLAN 359
Query: 360 ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEM 419
K + Q +I ++ SMT EE NP ++N SR RIA GSGR V EV M
Sbjct: 360 NPQLKNLNVD-QKQIDHTEAIVYSMTPEE--RENPDMLNPSRRRRIAAGSGRPVVEVNRM 416
Query: 420 LEEYKRLAKIWSKMKGLKIPKKGEMSALS 448
++++K++ + SKM KG M LS
Sbjct: 417 IKQFKQMRDMMSKM------SKGNMKGLS 439
>gi|58337566|ref|YP_194151.1| signal recognition protein Ffh [Lactobacillus acidophilus NCFM]
gi|227904208|ref|ZP_04022013.1| Sec family type I general secretory pathway protein signal
recognition particle protein [Lactobacillus acidophilus
ATCC 4796]
gi|58254883|gb|AAV43120.1| signal recognition protein Ffh [Lactobacillus acidophilus NCFM]
gi|227868227|gb|EEJ75648.1| Sec family type I general secretory pathway protein signal
recognition particle protein [Lactobacillus acidophilus
ATCC 4796]
Length = 476
Score = 265 bits (676), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 154/449 (34%), Positives = 245/449 (54%), Gaps = 11/449 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L I +A++ ++ + E+ +N+ EI ALL+ADV FK+V++ IKK
Sbjct: 1 MAFENLSERIQKALKNLTGKGKVSEEDINKASREIRLALLEADVNFKVVKDFIKTIKKEA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ N + + + + EL KM+ K P++IM VGLQG+GKTTT K
Sbjct: 61 LGKEVQESLNPGQQVIKIVNEELTKMMGEEAVPLNKSKHIPTIIMMVGLQGTGKTTTVGK 120
Query: 121 YAYYHQK-KGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
AY+ QK + +P L+ D +R A DQLKQ + K+P + E D +I +G+
Sbjct: 121 LAYHLQKTQKARPLLIAGDIYRPAAVDQLKQIGEQLKVPVFSENGEKDVAKIVQDGLAEA 180
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQ 239
K D +++DT+GR + + L EE+ +V + +PD ++ V+D+ GQAA D A+ F +
Sbjct: 181 DKNKNDYVLIDTAGRLEIDEPLMEELERVKKVA-DPDNILLVVDAMTGQAATDVAKGFDE 239
Query: 240 SVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMG 299
+ V VI+TK+DG +GG ALS A T P++F G GE + + +VF SR+LGMG
Sbjct: 240 RLDVTGVILTKLDGDTRGGAALSIRAVTGKPILFTGQGEKLSDLDVFHPDRMASRILGMG 299
Query: 300 DWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSS 359
D +++ + + ++ +K+ E F +Q Q + KMGP+ Q+ M+PG ++
Sbjct: 300 DMLSLIERAQQDYDAKEAQKVAEKMRENTFDFNDFVDQLQQVQKMGPLDQIMKMIPGLAN 359
Query: 360 ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEM 419
K + Q +I ++ SMT EE NP ++N SR RIA GSGR V EV M
Sbjct: 360 NPQLKNLSVD-QKQIDHTEAIVYSMTEEE--RENPDILNPSRRRRIAAGSGRPVVEVNRM 416
Query: 420 LEEYKRLAKIWSKMKGLKIPKKGEMSALS 448
++++K++ ++ SK+ KG M LS
Sbjct: 417 IKQFKQMREMMSKV------TKGNMKGLS 439
>gi|15828813|ref|NP_326173.1| signal recognition particle protein [Mycoplasma pulmonis UAB CTIP]
gi|14089756|emb|CAC13515.1| SIGNAL RECOGNITION PARTICLE PROTEIN (FIFTY-FOUR HOMOLOG)
[Mycoplasma pulmonis]
Length = 449
Score = 265 bits (676), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 153/434 (35%), Positives = 248/434 (57%), Gaps = 11/434 (2%)
Query: 6 LGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDL 65
LG I ++IQ+MS T ++E + E + +I ALL+ADV +V++ ++K+ +L
Sbjct: 5 LGNRIQKSIQKMSKKTTLNEADILEVIKDIKFALLEADVNLLVVKKFIKDVKEKALESEL 64
Query: 66 AAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYH 125
N + + + + +EL +L GK KP VIMFVGLQG GKTTT K AYY
Sbjct: 65 IGKLNPSQTMIKIVKDELTTLLG-GKAQEIKIVKKPHVIMFVGLQGGGKTTTVAKVAYYL 123
Query: 126 QKKGW--KPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKEN 183
+KK + P LV D +R A DQL+ A + +IP Y + P++ A + ++ KE
Sbjct: 124 RKKKFVENPLLVACDVYRPAAIDQLQTLAKQIQIPVYANDVSVSPIKTARQALDQAYKEK 183
Query: 184 CDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSV 243
DL+I+DT+GR + L EE+ + + + PD +IFV D+ GQ + A+ F + +S+
Sbjct: 184 NDLVIIDTAGRLSIDEKLMEELLLIKKE-IKPDEIIFVADAMSGQDIINVAKTFHEKLSL 242
Query: 244 GAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSG 303
+ I+TK+D A+GG ALS P+ FIGTGE + ++F R+LGMGD
Sbjct: 243 SSSIITKLDSDARGGAALSIREILNIPIKFIGTGEKISNIDIFHADRMAERILGMGDVLS 302
Query: 304 FMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMP 363
++K EVV ++ +++ ++ +GNF L + E + + KMG + ++ M+PG ++
Sbjct: 303 LIEKTEEVVDKNKVKKMMNRMIKGNFDLEDLMENLKQVQKMGKLSKIVKMIPGLGGKI-D 361
Query: 364 KGREKESQAKIKRYMTMMDSMTNEELDSSNPKLM-NDSRIMRIARGSGRQVREVMEMLEE 422
+ + ++++KI+ + ++ SMT+EE NPKL+ N SR RI GSGR V+E ++ E
Sbjct: 362 ESKLDQAESKIRLFTILISSMTSEE--KKNPKLLKNASRKRRIIEGSGRSVQEYNLLVNE 419
Query: 423 YKRLAKIWSKMKGL 436
++ + K KMK L
Sbjct: 420 FETMTK---KMKAL 430
>gi|336053926|ref|YP_004562213.1| signal recognition particle protein [Lactobacillus kefiranofaciens
ZW3]
gi|333957303|gb|AEG40111.1| Signal recognition particle protein [Lactobacillus kefiranofaciens
ZW3]
Length = 476
Score = 264 bits (675), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 154/450 (34%), Positives = 245/450 (54%), Gaps = 11/450 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L I +A++ ++ + E+ +N+ EI ALL+ADV F++V++ IKK
Sbjct: 1 MAFENLSERIQKALKNLTGKGKVSEEDINKASREIRLALLEADVNFRVVKDFIKTIKKEA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+++ N + + + + +L KM+ K P++IM VGLQG+GKTTT K
Sbjct: 61 LGEEVQESLNPGQQVIKIVNEQLTKMMGEEAVPLNKSKHIPTIIMMVGLQGTGKTTTVGK 120
Query: 121 YAYYHQK-KGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
AY+ QK + +P L+ D +R A DQLKQ K K+P Y E D +I +G+
Sbjct: 121 LAYHLQKTEKARPLLIAGDIYRPAAVDQLKQIGDKLKVPVYSEDGEKDVAKIVQDGLAEA 180
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQ 239
K D +++DT+GR + + L EE+ +V + PD ++ V+D+ GQAA D A+ F +
Sbjct: 181 DKNKNDYVLIDTAGRLEIDEPLMEELERVKQVA-EPDNILLVVDAMTGQAATDVAKGFDE 239
Query: 240 SVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMG 299
+ V VI+TK+DG +GG ALS A T P++F G GE + + +VF SR+LGMG
Sbjct: 240 RLDVTGVILTKLDGDTRGGAALSIRAVTGKPILFTGQGEKLSDLDVFHPDRMASRILGMG 299
Query: 300 DWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSS 359
D ++K + + ++ +K+ E F +Q + + KMGP+ Q+ M+PG ++
Sbjct: 300 DMLSLIEKAQQDYDAKEAQKVAEKMRESTFDFNDFVDQLKQVQKMGPLDQIMKMIPGMAN 359
Query: 360 ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEM 419
K + Q +I ++ SMT EE NP ++N SR RIA GSGR V EV M
Sbjct: 360 NPQLKNLSID-QKQIDHTEAIVYSMTEEE--RENPDILNPSRRRRIAAGSGRPVVEVNRM 416
Query: 420 LEEYKRLAKIWSKMKGLKIPKKGEMSALSR 449
++++K++ + SK+ KG M LS+
Sbjct: 417 IKQFKQMRDMMSKV------TKGNMKGLSK 440
>gi|339448384|ref|ZP_08651940.1| signal recognition particle protein [Lactobacillus fructivorans
KCTC 3543]
Length = 481
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 159/485 (32%), Positives = 259/485 (53%), Gaps = 24/485 (4%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L + +A + + I E L E + EI ALL+ADV FK+VR+ +++
Sbjct: 1 MAFEGLTDRLQKAFKNLRGKGKISESDLRETMREIRLALLEADVNFKVVRQFVKTVQEKA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
D+ G N + I + + +EL M+ P+VIM VGLQG+GKTT+ K
Sbjct: 61 KGADVLEGLNPAQQIVKIVNDELTNMMGKSATPLVKSDKIPTVIMMVGLQGAGKTTSAGK 120
Query: 121 YAY-YHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
A +P ++ AD +R A +QL++ + +P + T+ DPV+I +G++
Sbjct: 121 LAKKLKTDDHARPLMIAADVYRPAAIEQLEKVGEQVGVPVFQEGTDVDPVQIVQDGLKEA 180
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQ 239
K N D +++DT+GR + + L +E++ + + NP+ ++ V+D+ GQ A D A F
Sbjct: 181 DKNNNDYVLIDTAGRLQIDENLMDELKNIKKVA-NPNDILLVVDAMTGQNAVDTAVGFND 239
Query: 240 SVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMG 299
++ + VI+TK+DG +GG ALS A T P++F+G GE +D+ +VF SR+LGMG
Sbjct: 240 ALDITGVILTKLDGDTRGGAALSIRAVTDKPIMFVGQGEKLDDLDVFHPDRMASRILGMG 299
Query: 300 DWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSS 359
D F++K + +Q EL +K+ E +F +Q + I KMGPI + M+PG ++
Sbjct: 300 DMLSFIEKTQKEYDENQAKELTEKIKENSFDFDDFIDQLEQIQKMGPIQDLVKMIPGMAN 359
Query: 360 ELMPKGREKESQAK-IKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVME 418
P + K + ++ SMT+EE SNP ++N SR RIARGS + +++V
Sbjct: 360 N--PALKNLNVNPKDLDHIKAIIYSMTSEE--RSNPDVLNPSRRRRIARGSAQPIQQVNR 415
Query: 419 MLEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQIGGVGGLQNL- 477
+++++ ++ K+ +K+ G MS LS MN+ M G G L NL
Sbjct: 416 LIKQFDQMKKMMNKVSN------GNMSGLSNMMNSAGMGG----------GMTGKLSNLA 459
Query: 478 MKQMG 482
MK+MG
Sbjct: 460 MKRMG 464
>gi|288817542|ref|YP_003431889.1| signal recognition particle GTPase [Hydrogenobacter thermophilus
TK-6]
gi|384128308|ref|YP_005510921.1| signal recognition particle protein [Hydrogenobacter thermophilus
TK-6]
gi|288786941|dbj|BAI68688.1| signal recognition particle GTPase [Hydrogenobacter thermophilus
TK-6]
gi|308751145|gb|ADO44628.1| signal recognition particle protein [Hydrogenobacter thermophilus
TK-6]
Length = 436
Score = 263 bits (672), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 152/431 (35%), Positives = 250/431 (58%), Gaps = 13/431 (3%)
Query: 11 SRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHN 70
S+++ ++ + EK +N+ L +I ALL+ADV + +V+ ++ +D+ +
Sbjct: 10 SKSLSKLRGVRKLTEKQVNDILRDIRMALLEADVDYDVVKSFLKKVRDRAINEDIKNKLS 69
Query: 71 KRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGW 130
+ ++ EL +L K K V++FVGLQG+GKTTT K A + + + +
Sbjct: 70 PADSVVLTVYEELTSILGGEKADL-----KRGVVIFVGLQGTGKTTTIGKLANFLKNQSF 124
Query: 131 KPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVD 190
K A+ D R A QL++ A K +P+Y S+ E+ PV IA + +E KKE D +++D
Sbjct: 125 KVAVSSTDVRRPAAMLQLQRLAEKVGVPYY-SFDEASPVEIATKALERAKKEGVDYLLID 183
Query: 191 TSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTK 250
T+GR + L EE++++ EA V P VI+V D+ GQ A +AF +S+++ VI+TK
Sbjct: 184 TAGRLHIDEELMEELKRIKEA-VKPSEVIYVADAMQGQEALRALKAFHESITLTGVILTK 242
Query: 251 MDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHE 310
MDG A+GG ALS A P+ F+G GE +++ E+F R+LG+GD ++K +
Sbjct: 243 MDGDARGGVALSVKEAIGVPIKFVGVGEKLEDIEIFYPDRIAQRILGLGDLQSLIEKAQQ 302
Query: 311 VVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKES 370
++P D+ L ++ G F L M +Q + I MGP+ ++ M+PG S+EL K
Sbjct: 303 IIPEDEAQVLATRIMMGEFDLEDMLKQIRFIKSMGPLEKILGMIPGVSAEL---KNLKID 359
Query: 371 QAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLEEYKRLAKIW 430
+ K K+ ++ SMT EE NPK++N SR +RIA+GSG V +V ++L+EY+ + K+
Sbjct: 360 EKKFKKTEAIILSMTKEE--RRNPKIINMSRKVRIAKGSGTSVGDVNKVLKEYEEMKKMI 417
Query: 431 SKMKGLK-IPK 440
++KG++ IPK
Sbjct: 418 KRLKGMQGIPK 428
>gi|227892628|ref|ZP_04010433.1| Sec family type I general secretory pathway protein signal
recognition particle protein [Lactobacillus ultunensis
DSM 16047]
gi|227865560|gb|EEJ72981.1| Sec family type I general secretory pathway protein signal
recognition particle protein [Lactobacillus ultunensis
DSM 16047]
Length = 476
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 154/449 (34%), Positives = 244/449 (54%), Gaps = 11/449 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L I +A++ ++ + E+ +N+ EI ALL+ADV FK+V++ IKK
Sbjct: 1 MAFENLSERIQKALKNLTGKGKVSEEDINKASREIRLALLEADVNFKVVKDFIKTIKKEA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ N + + + + +L KM+ K P++IM VGLQG+GKTTT K
Sbjct: 61 LGKEVQESLNPGQQVIKIVNEQLTKMMGEEAVPLNKSKHIPTIIMMVGLQGTGKTTTVGK 120
Query: 121 YAYYHQK-KGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
AY+ QK + +P L+ D +R A DQLKQ + K+P + E D +I +G+
Sbjct: 121 LAYHLQKTEKARPLLIAGDIYRPAAVDQLKQIGEQLKVPVFSEDGEKDVAKIVKDGLAEA 180
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQ 239
K D +++DT+GR + + L EE+ +V + PD ++ V+D+ GQAA D A+ F +
Sbjct: 181 DKNKNDYVLIDTAGRLEIDEPLMEELERVKKVA-QPDNILLVVDAMTGQAATDVAKGFDE 239
Query: 240 SVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMG 299
+ V VI+TK+DG +GG ALS A T P++F G GE + + +VF SR+LGMG
Sbjct: 240 RLDVTGVILTKLDGDTRGGAALSIRAVTGKPILFTGQGEKLTDLDVFHPDRMASRILGMG 299
Query: 300 DWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSS 359
D ++K + + ++ +K+ E F +Q Q + KMGP+ Q+ M+PG ++
Sbjct: 300 DMLSLIEKAQQDYDAKEAKKVAEKMRENTFDFNDFVDQLQQVQKMGPLDQIMKMIPGMAN 359
Query: 360 ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEM 419
K + Q +I ++ SMT EE NP ++N SR RIA GSGR V EV M
Sbjct: 360 NPQLKNLSVD-QKQIDHTEAIVYSMTEEE--RENPDILNPSRRRRIAAGSGRPVVEVNRM 416
Query: 420 LEEYKRLAKIWSKMKGLKIPKKGEMSALS 448
++++K++ ++ SK+ KG M LS
Sbjct: 417 IKQFKQMRELMSKV------TKGNMKGLS 439
>gi|403514808|ref|YP_006655628.1| signal recognition particle protein [Lactobacillus helveticus
R0052]
gi|403080246|gb|AFR21824.1| signal recognition particle protein [Lactobacillus helveticus
R0052]
Length = 476
Score = 261 bits (668), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 153/449 (34%), Positives = 244/449 (54%), Gaps = 11/449 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L I +A++ ++ + E+ +N+ EI ALL+ADV FK+V++ IKK
Sbjct: 1 MAFENLSERIQKALKNLTGKGKVSEEDINKASREIRLALLEADVNFKVVKDFIKTIKKEA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ N + + + + EL KM+ K P++IM VGLQG+GKTTT K
Sbjct: 61 LGKEVQESLNPGQQVIKIVNEELTKMMGEEAVPLNKSKHIPTIIMMVGLQGTGKTTTVGK 120
Query: 121 YAYYHQK-KGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
AY+ QK + +P L+ D +R A DQLKQ + K+P + E D +I +G+
Sbjct: 121 LAYHLQKTQKARPLLIAGDIYRPAAVDQLKQIGEQLKVPVFSEDGEKDVAKIVQDGLAEA 180
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQ 239
K D +++DT+GR + + L EE+ +V + PD ++ V+D+ GQAA D A+ F +
Sbjct: 181 DKNKNDYVLIDTAGRLEIDEPLMEELERVKK-VAQPDNILLVVDAMTGQAATDVAKGFDE 239
Query: 240 SVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMG 299
+ V VI+TK+DG +GG ALS A T P++F G GE + + ++F SR+LGMG
Sbjct: 240 RLDVTGVILTKLDGDTRGGAALSIRAVTGKPILFTGQGEKLSDLDIFHPDRMASRILGMG 299
Query: 300 DWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSS 359
D ++K + + ++ +K+ E F +Q + + KMGP+ Q+ M+PG ++
Sbjct: 300 DMLSLIEKAQQDYDAKEAEKVAEKMRENTFDFNDFVDQLKQVQKMGPLDQIMKMIPGMAN 359
Query: 360 ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEM 419
K + Q +I + ++ SMT E + +P L+N SR RIA GSGR V EV M
Sbjct: 360 NPQLKNLNVD-QKQIDHTIAIVYSMT--EAEREDPDLLNPSRRRRIAAGSGRPVVEVNRM 416
Query: 420 LEEYKRLAKIWSKMKGLKIPKKGEMSALS 448
++++K++ + SKM KG M LS
Sbjct: 417 IKQFKQMRDMMSKM------TKGNMKGLS 439
>gi|161507707|ref|YP_001577663.1| Signal recognition protein Ffh [Lactobacillus helveticus DPC 4571]
gi|260101393|ref|ZP_05751630.1| signal recognition particle protein [Lactobacillus helveticus DSM
20075]
gi|417008883|ref|ZP_11945704.1| signal recognition particle protein [Lactobacillus helveticus MTCC
5463]
gi|160348696|gb|ABX27370.1| Signal recognition protein Ffh [Lactobacillus helveticus DPC 4571]
gi|260084804|gb|EEW68924.1| signal recognition particle protein [Lactobacillus helveticus DSM
20075]
gi|328465660|gb|EGF36877.1| signal recognition particle protein [Lactobacillus helveticus MTCC
5463]
Length = 476
Score = 261 bits (668), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 153/449 (34%), Positives = 244/449 (54%), Gaps = 11/449 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L I +A++ ++ + E+ +N+ EI ALL+ADV FK+V++ IKK
Sbjct: 1 MAFENLSERIQKALKNLTGKGKVSEEDINKASREIRLALLEADVNFKVVKDFIKTIKKEA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ N + + + + EL KM+ K P++IM VGLQG+GKTTT K
Sbjct: 61 LGKEVQESLNPGQQVIKIVNEELTKMMGEEAVPLNKSKHIPTIIMMVGLQGTGKTTTVGK 120
Query: 121 YAYYHQK-KGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
AY+ QK + +P L+ D +R A DQLKQ + K+P + E D +I +G+
Sbjct: 121 LAYHLQKTQKARPLLIAGDIYRPAAVDQLKQIGEQLKVPVFSEDGEKDVAKIVQDGLAEA 180
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQ 239
K D +++DT+GR + + L EE+ +V + PD ++ V+D+ GQAA D A+ F +
Sbjct: 181 DKNKNDYVLIDTAGRLEIDEPLMEELERVKK-VAQPDNILLVVDAMTGQAATDVAKGFDE 239
Query: 240 SVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMG 299
+ V VI+TK+DG +GG ALS A T P++F G GE + + ++F SR+LGMG
Sbjct: 240 RLDVTGVILTKLDGDTRGGAALSIRAVTGKPILFTGQGEKLSDLDIFHPDRMASRILGMG 299
Query: 300 DWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSS 359
D ++K + + ++ +K+ E F +Q + + KMGP+ Q+ M+PG ++
Sbjct: 300 DMLSLIEKAQQDYDAKEAEKVAEKMRENTFDFNDFVDQMKQVQKMGPLDQIMKMIPGMAN 359
Query: 360 ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEM 419
K + Q +I + ++ SMT E + +P L+N SR RIA GSGR V EV M
Sbjct: 360 NPQLKNLNVD-QKQIDHTIAIVYSMT--EAEREDPDLLNPSRRRRIAAGSGRPVVEVNRM 416
Query: 420 LEEYKRLAKIWSKMKGLKIPKKGEMSALS 448
++++K++ + SKM KG M LS
Sbjct: 417 IKQFKQMRDMMSKM------TKGNMKGLS 439
>gi|385813594|ref|YP_005849987.1| Signal recognition protein Ffh [Lactobacillus helveticus H10]
gi|323466313|gb|ADX70000.1| Signal recognition protein Ffh [Lactobacillus helveticus H10]
Length = 476
Score = 261 bits (666), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 153/449 (34%), Positives = 244/449 (54%), Gaps = 11/449 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L I +A++ ++ + E+ +N+ EI ALL+ADV FK+V++ IKK
Sbjct: 1 MAFENLSERIQKALKNLTGKGKVSEEDINKASREIRLALLEADVNFKVVKDFIKTIKKEA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ N + + + + EL KM+ K P++IM VGLQG+GKTTT K
Sbjct: 61 LGKEVQESLNPGQQVIKIVNEELTKMMGEEAVPLNKSKHIPTIIMMVGLQGTGKTTTVGK 120
Query: 121 YAYYHQK-KGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
AY+ QK + +P L+ D +R A DQLKQ + K+P + E D +I +G+
Sbjct: 121 LAYHLQKTQKARPLLIAGDIYRPAAVDQLKQIGEQLKVPVFSKDGEKDVAKIVQDGLAEA 180
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQ 239
K D +++DT+GR + + L EE+ +V + PD ++ V+D+ GQAA D A+ F +
Sbjct: 181 DKNKNDYVLIDTAGRLEIDEPLMEELERVKKVA-QPDNILLVVDAMTGQAATDVAKGFDE 239
Query: 240 SVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMG 299
+ V VI+TK+DG +GG ALS A T P++F G GE + + ++F SR+LGMG
Sbjct: 240 RLDVTGVILTKLDGDTRGGAALSIRAVTGKPILFTGQGEKLSDLDIFHPDRMASRILGMG 299
Query: 300 DWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSS 359
D ++K + + ++ +K+ E F +Q + + KMGP+ Q+ M+PG ++
Sbjct: 300 DMLSLIEKAQQDYDAKEVEKVAEKMRENTFDFNDFVDQMKQVQKMGPLDQIMKMIPGMAN 359
Query: 360 ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEM 419
K + Q +I + ++ SMT E + +P L+N SR RIA GSGR V EV M
Sbjct: 360 NPQLKNLNVD-QKQIDHTIAIVYSMT--EAEREDPDLLNPSRRRRIAAGSGRPVVEVNRM 416
Query: 420 LEEYKRLAKIWSKMKGLKIPKKGEMSALS 448
++++K++ + SKM KG M LS
Sbjct: 417 IKQFKQMRDMMSKM------TKGNMKGLS 439
>gi|296139328|ref|YP_003646571.1| signal recognition particle protein [Tsukamurella paurometabola DSM
20162]
gi|296027462|gb|ADG78232.1| signal recognition particle protein [Tsukamurella paurometabola DSM
20162]
Length = 522
Score = 260 bits (665), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 163/454 (35%), Positives = 246/454 (54%), Gaps = 30/454 (6%)
Query: 5 QLGGSIS--RAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNL 62
+LGG++S R ++++A I + EI ALL+ADV +VR + IK+
Sbjct: 8 RLGGALSGLRGKGRLTDADI------DATAREIRLALLEADVALPVVRAFVSRIKERAKG 61
Query: 63 DDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYA 122
+++A N + I + + EL +L K P+VIM GLQG+GKTT K A
Sbjct: 62 AEVSAALNPAQQIVKIVNEELVGILGGETRRINLAKTPPTVIMLAGLQGAGKTTLAGKLA 121
Query: 123 YYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSY-------------TESDPV 169
++ +K+G P LV D R GA DQLK +A +P Y + + +DPV
Sbjct: 122 HHLKKQGHTPMLVACDLQRPGAVDQLKIVGERAGVPTYAPHPGTSVGGEGTLGVSAADPV 181
Query: 170 RIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQA 229
+A G+E K + D++IVDT+GR + L + R + +A V+PD V+FV+D+ IGQ
Sbjct: 182 EVARGGIEEAKAKQHDVVIVDTAGRLGIDEELMGQARAIRDA-VDPDEVLFVLDAMIGQD 240
Query: 230 AFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVK 289
A AQAF + V V++TK+DG A+GG ALS T P++F TGE +D+F+VF
Sbjct: 241 AVTTAQAFAEGVDFTGVVLTKLDGDARGGAALSVREITGKPILFASTGEKLDDFDVFHPD 300
Query: 290 PFVSRLLGMGDWSGFMDKIHEVVPMDQQ--PELLQKLSEGNFTLRIMYEQFQNILKMGPI 347
SR+LGMGD +++ +V MDQQ E K++ G TL +Q I KMGPI
Sbjct: 301 RMSSRILGMGDVLTLIEQAEQV--MDQQKAEEAAAKITSGELTLEDFLDQMLMIRKMGPI 358
Query: 348 GQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIAR 407
G + MLPG M +++ R ++ MT E ++PK++N SR +RIA+
Sbjct: 359 GNLLGMLPGAGQ--MKDALAAVDDSQLDRIQAIIRGMTPAE--RADPKIINASRRLRIAK 414
Query: 408 GSGRQVREVMEMLEEYKRLAKIWSKMKGLKIPKK 441
GSG V +V ++++ + K+ S+M G PK+
Sbjct: 415 GSGVAVSDVNQLVDRFFEARKMMSQMAGFGAPKR 448
>gi|295696070|ref|YP_003589308.1| signal recognition particle protein [Kyrpidia tusciae DSM 2912]
gi|295411672|gb|ADG06164.1| signal recognition particle protein [Kyrpidia tusciae DSM 2912]
Length = 445
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 145/431 (33%), Positives = 244/431 (56%), Gaps = 5/431 (1%)
Query: 6 LGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDL 65
L G + A ++ + + E ++E + E+ RALL ADV F +VR+ +++ ++
Sbjct: 7 LAGRLQEAFARLKSKGKLSEADVDEAMKEVRRALLAADVNFTVVRDFVARVRERAVGQEV 66
Query: 66 AAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYH 125
+ + + + +EL +L GKPS G+P+V+M VGLQG+GKTTT K A +
Sbjct: 67 MKSLTPAQQVIKIVHDELTALLG-GKPSTLNLSGRPAVVMLVGLQGAGKTTTAGKLAQWV 125
Query: 126 QKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCD 185
+K+G +P LV AD +R A QL+ K+P + ++DPV I+ +E +E CD
Sbjct: 126 RKQGRRPLLVAADVYRPAAVRQLQTLGEALKVPVFSVDGDADPVEISKSSLERASQEGCD 185
Query: 186 LIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGA 245
+++VDT+GR + AL EE+ ++ A V P ++ V+D+ GQ+A + A+AF + +
Sbjct: 186 VVLVDTAGRLHVDDALMEELERMKAAVV-PGEILLVVDAMTGQSAVEVAEAFHGRLGLTG 244
Query: 246 VIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFM 305
I TK+DG KGG ALS ++ P+ F G GE +D E F SR+LGMGD +
Sbjct: 245 AIFTKLDGDTKGGAALSILSVAGCPIKFAGVGEKLDALEPFYPDRMASRILGMGDVLTLI 304
Query: 306 DKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKG 365
+K + V ++ +L ++L G F+L +Q + + K+GP+ Q+ MLPG +++ G
Sbjct: 305 EKAQQTVDAEKAKQLERQLRAGEFSLEDFLDQLRQVRKLGPLDQLLGMLPGM-NKIKGLG 363
Query: 366 REKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLEEYKR 425
+ + ++ R ++ SMT EE P+L++ SR RIA GSG +V +V +L+++K
Sbjct: 364 NLQVDERQLGRVEAIILSMTPEE--RRRPELIDASRRRRIASGSGTRVEDVGRLLKQFKE 421
Query: 426 LAKIWSKMKGL 436
+ K+ + G+
Sbjct: 422 MRKMMKQFSGM 432
>gi|183230399|ref|XP_001913435.1| signal recognition particle 54 kDa protein [Entamoeba histolytica
HM-1:IMSS]
gi|169802916|gb|EDS89786.1| signal recognition particle 54 kDa protein, putative [Entamoeba
histolytica HM-1:IMSS]
Length = 259
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 122/225 (54%), Positives = 171/225 (76%), Gaps = 1/225 (0%)
Query: 17 MSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQ 76
M+++T++DE+V+N L EI +LL DV +R+M NIKK +N +D+ G +KR++I+
Sbjct: 1 MTSSTVVDEEVINTLLKEIETSLLGEDVNPIFIRQMVNNIKKKINSEDIPDGIDKRKLIK 60
Query: 77 QAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVC 136
++F EL ++DP +F PKKGK V+M VGLQG+GKTTT TK A Y++ +G+KPA+V
Sbjct: 61 DSVFEELINLVDPKTEAFKPKKGKTCVLMMVGLQGAGKTTTITKLALYYKNRGYKPAVVG 120
Query: 137 ADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHK 196
ADTFRAGA++QL+ NA +A +PF+G ESDPV++A EGV TF+KE D+I+VDTSGRHK
Sbjct: 121 ADTFRAGAYEQLQMNAKRAGVPFFGIKEESDPVKVASEGVRTFRKEKNDIILVDTSGRHK 180
Query: 197 QEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSV 241
Q+ LF+EM+ V +A + PD +IFVMD +IGQAAF QA+AFK +V
Sbjct: 181 QDKELFKEMQSVRDA-IKPDSIIFVMDGAIGQAAFGQAKAFKDAV 224
>gi|167043737|gb|ABZ08429.1| putative SRP54-type protein, GTPase domain protein [uncultured
marine crenarchaeote HF4000_APKG3B16]
Length = 441
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 155/434 (35%), Positives = 259/434 (59%), Gaps = 6/434 (1%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L L S+ AI+++ N++ +DE+++ E ++ R+LLQ+DV KLV E+ NI+
Sbjct: 1 MLDNLKSSLRAAIKKIVNSSGVDEELIKELSKDVQRSLLQSDVNVKLVFEITKNIESRSL 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
+ G +++ I + +++EL K+L F K GK + ++ +G+QGSGKTT +K
Sbjct: 61 NEKPPPGLSRKDHIVKILYDELAKLL-GNDTEFHFKSGKINKVLLLGIQGSGKTTVASKL 119
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKK 181
A + K+G++ ++ ADTFR GA QL+ K+ + YG D ++ G++ F+
Sbjct: 120 ARFLSKQGYRVGVIGADTFRPGALVQLRTMCEKSDVEVYGDEKNKDSPQVVKNGLKHFES 179
Query: 182 ENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSV 241
N D+I++DT+GRHK+E L +EM+Q+++A +PDL + V+D +IGQ QA+AF + V
Sbjct: 180 SNLDIILIDTAGRHKEEKDLLDEMKQINKAA-SPDLALLVVDGTIGQQCHAQAEAFHKIV 238
Query: 242 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 301
VG +I+TK+D AKGGGAL+A AAT + V++IGTGE +D+ E F FV RLLGMGD
Sbjct: 239 PVGGIIITKLDSSAKGGGALAASAATGAQVMYIGTGERIDDLETFSPTRFVGRLLGMGDI 298
Query: 302 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 361
+D + + + + ++++S G + Y Q + + K+G + +PG S +
Sbjct: 299 QAVLD-LAKRLENEADDVRMKRISSGKMNMEDFYYQLEEVTKVGSFQGLLDSMPGLSG-M 356
Query: 362 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLE 421
+ + + + + KI ++ ++ SM E ++P L+N SR+ RIARGSG EV E+++
Sbjct: 357 VKEDQLDKMEEKIDKWRYIIQSMNQAE--KADPDLLNASRVKRIARGSGWPEHEVKELIK 414
Query: 422 EYKRLAKIWSKMKG 435
YK + KG
Sbjct: 415 NYKNSKNMMKASKG 428
>gi|374296102|ref|YP_005046293.1| signal recognition particle protein [Clostridium clariflavum DSM
19732]
gi|359825596|gb|AEV68369.1| signal recognition particle protein [Clostridium clariflavum DSM
19732]
Length = 450
Score = 258 bits (660), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 155/446 (34%), Positives = 252/446 (56%), Gaps = 10/446 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNI-KKI 59
MV L + A++++ + EK + E + EI ALL+ADV FK+V++ + ++
Sbjct: 1 MVFEGLSNKLQEAVRKLKGKGRVTEKDVKEMMREIKLALLEADVNFKVVKDFIAKVSERA 60
Query: 60 VNLDDLAAGHNKRRIIQQAIFNELCKMLDPG--KPSFTPKKGKPSVIMFVGLQGSGKTTT 117
V D L + +++I+ + EL ++ PG K F PK P+V M VGLQGSGKTTT
Sbjct: 61 VGQDVLESLTPGQQVIK-IVHEELINLMGPGQSKLVFAPKP--PTVYMMVGLQGSGKTTT 117
Query: 118 CTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVE 177
K A +K+G KP LV D +R A QL+ + + + +++P+ IA +E
Sbjct: 118 SGKLANLLRKQGKKPLLVACDVYRPAAIKQLQVVGGQLGVDVFSMGDKTNPIDIAKAAIE 177
Query: 178 TFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAF 237
K + DL+I+DT+GR + AL +E++ + E +V P ++ V+DS GQ A + ++ F
Sbjct: 178 HAKSKQYDLVIIDTAGRLHIDEALMDELKNIKE-SVRPTEILLVVDSMTGQDAVNVSETF 236
Query: 238 KQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLG 297
+ + + VI+TK+DG +GG ALS T P+ FIG GE +++ E F SR+LG
Sbjct: 237 NEKLGIDGVILTKLDGDTRGGAALSVKTVTGKPIKFIGMGEKLNDLEPFFPDRMASRILG 296
Query: 298 MGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGF 357
MGD ++K E + EL +K+ FTL EQ Q I KMGP+ ++ M+PG
Sbjct: 297 MGDVLSLIEKAQEAFDEKKALELERKMRTQQFTLEDFLEQMQQIKKMGPLNKILGMIPGI 356
Query: 358 SSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVM 417
++E + +S+ ++ R+ ++ SMT +E ++P ++N SR RIA GSG +V++V
Sbjct: 357 NAEALNAINTADSEKELARFEAIIKSMTKQE--RNDPSIINGSRRKRIAAGSGTKVQDVN 414
Query: 418 EMLEEYKRLAKIWSKMKGL-KIPKKG 442
++L+ ++ + K+ M L K KKG
Sbjct: 415 KVLKSFEEMKKMMKLMNDLGKHGKKG 440
>gi|295425198|ref|ZP_06817901.1| signal recognition particle protein [Lactobacillus amylolyticus DSM
11664]
gi|295064974|gb|EFG55879.1| signal recognition particle protein [Lactobacillus amylolyticus DSM
11664]
Length = 476
Score = 258 bits (660), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 154/449 (34%), Positives = 240/449 (53%), Gaps = 11/449 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L I +A++ ++ I E+ +N+ EI ALL+ADV FK+V++ IKK
Sbjct: 1 MAFENLSERIQKALKNLTGKGKISEEDINKASREIRLALLEADVNFKVVKDFIKKIKKEA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ N + + + + EL KM+ K P++IM VGLQG+GKTTT K
Sbjct: 61 LGKEVQESLNPGQQVIKIVNEELTKMMGETAVGLNKSKHIPTIIMMVGLQGTGKTTTVGK 120
Query: 121 YAYYHQK-KGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
AY+ QK + +P L+ D +R A DQLKQ + K+P Y E D +I +G+
Sbjct: 121 LAYHLQKTEKARPLLIAGDIYRPAAVDQLKQIGDQLKVPVYSEADEKDVAKIVQDGLAEA 180
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQ 239
K D +I+DT+GR + + L EE+ ++ + PD ++ V+D+ GQAA D A+ F +
Sbjct: 181 DKNKNDYVIIDTAGRLEIDEPLMEELERIKK-VAQPDNILLVVDAMTGQAATDVAKGFDE 239
Query: 240 SVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMG 299
+ V VI+TK+DG +GG ALS A T P+I+ G GE + + E F SR+LGMG
Sbjct: 240 RLDVTGVILTKLDGDTRGGAALSIRAVTGKPIIYTGQGEKLTDLEDFHPDRMASRILGMG 299
Query: 300 DWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSS 359
D ++K + + ++ K+ E F +Q + + KMGP+ Q+ M+PG ++
Sbjct: 300 DMLTLIEKAQQDYDQKEAEKVAMKMKENTFDFNDFIDQLEQVQKMGPLDQIMKMIPGMAN 359
Query: 360 ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEM 419
K + + +I ++ SMT EE +P ++N SR RIA GSGR V EV M
Sbjct: 360 NPQLKNLSIDDK-QIAHTKAIVYSMTEEE--REDPDILNPSRRRRIAAGSGRPVVEVNRM 416
Query: 420 LEEYKRLAKIWSKMKGLKIPKKGEMSALS 448
++++K+ + SK+ KG M LS
Sbjct: 417 IKQFKQARDMMSKI------TKGNMKGLS 439
>gi|402818507|ref|ZP_10868090.1| signal recognition particle protein Ffh [Paenibacillus alvei DSM
29]
gi|402503973|gb|EJW14505.1| signal recognition particle protein Ffh [Paenibacillus alvei DSM
29]
Length = 460
Score = 257 bits (657), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 152/421 (36%), Positives = 229/421 (54%), Gaps = 7/421 (1%)
Query: 23 IDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNE 82
+ E +NE + E+ ALL+ADV FK+V+E +K+ ++ +I + E
Sbjct: 23 VSEDDVNEAMREVRLALLEADVNFKVVKEFIGKVKEKAVGQEVMQSFTPGMVIIDIVNKE 82
Query: 83 LCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRA 142
L +++ P+VIM VGLQG+GKTTT K A QK+ KP LV AD +R
Sbjct: 83 LTELMGGTAAKLAKANKPPTVIMMVGLQGAGKTTTSGKLAKMLQKQNHKPLLVAADIYRP 142
Query: 143 GAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALF 202
A QL+ + K+P + + PV IA G+E K+ + D +I+DT+GR + AL
Sbjct: 143 AAIKQLQVVGEQIKVPVFALGDQVSPVEIARRGLEHAKENHLDYVIIDTAGRLHIDEALM 202
Query: 203 EEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALS 262
EE++QV AT PD V+ V+D+ GQ A + A +F Q + + V++TK+DG +GG ALS
Sbjct: 203 EELKQV-HATAKPDEVLLVVDAMTGQDAVNVADSFNQQLELTGVVLTKLDGDTRGGAALS 261
Query: 263 AVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQ 322
A T P+ F GE MD E F + SR+LGMGD ++K + ++ E+
Sbjct: 262 VKAVTGCPIKFATLGEKMDALEPFHPERMASRILGMGDMLSLIEKAQANIDTEKAKEMEM 321
Query: 323 KLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMD 382
K+ FT EQ Q + K+GPI Q+ M+PG + ++ K + ++ R ++
Sbjct: 322 KMRNAAFTFDDFLEQMQQVKKLGPIDQILDMIPGMN-KMKQNANLKVDERQMGRIEAIVR 380
Query: 383 SMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEML---EEYKRLAKIWSKMKGLKIP 439
SMTNEE +P L+N SR RIA GSG + +V ++ +E +R+ K +S M G K P
Sbjct: 381 SMTNEE--RQDPDLINHSRRKRIAAGSGTALADVNRLIKQFDEMRRMMKQFSDMMGPKGP 438
Query: 440 K 440
K
Sbjct: 439 K 439
>gi|374603417|ref|ZP_09676397.1| signal recognition particle protein [Paenibacillus dendritiformis
C454]
gi|374391013|gb|EHQ62355.1| signal recognition particle protein [Paenibacillus dendritiformis
C454]
Length = 457
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 148/421 (35%), Positives = 231/421 (54%), Gaps = 7/421 (1%)
Query: 23 IDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNE 82
+ E +NE + E+ ALL+ADV FK+V+E +K+ ++ +I + E
Sbjct: 23 VTEDDVNEAMREVRLALLEADVNFKVVKEFINKVKEKAVGQEVMKSFTPGMVIVDIVNKE 82
Query: 83 LCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRA 142
L +++ P+VIM GLQG+GKTTT K A QK+ KP LV AD +R
Sbjct: 83 LTELMGGTAAKLAKANKPPTVIMMAGLQGAGKTTTSGKLAKLLQKQNHKPLLVAADIYRP 142
Query: 143 GAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALF 202
A QL+ + +P + + PV IA + +E + + D +IVDT+GR + AL
Sbjct: 143 AAIKQLEVLGAQINVPVFSLGDQVSPVEIARQAMEHARANHLDYVIVDTAGRLHIDEALM 202
Query: 203 EEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALS 262
EE++Q+ E TVNPD V+ V+D+ GQ A + A++F Q +++ V++TK+DG +GG ALS
Sbjct: 203 EELKQIHE-TVNPDEVLLVVDAMTGQDAVNVAESFNQQLALTGVVLTKLDGDTRGGAALS 261
Query: 263 AVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQ 322
A T P+ F GE +D E F + SR+LGMGD ++K + D+ E+
Sbjct: 262 VKAVTGCPIKFAALGEKIDALEPFHPERMASRILGMGDMLSLIEKAQANIDADKAKEMEM 321
Query: 323 KLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYMTMMD 382
K+ FT EQ Q + ++GPI Q+ M+PG + ++ K + ++ R ++
Sbjct: 322 KMRNAAFTFDDFLEQMQQVKQLGPIDQILDMIPGMN-KMKQTANLKVDERQMGRIEAIVR 380
Query: 383 SMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEML---EEYKRLAKIWSKMKGLKIP 439
SMTNEE +P L+N SR RIA GSG + +V ++ +E +R+ K +++M G K P
Sbjct: 381 SMTNEE--RQDPDLINHSRRKRIAAGSGTSLADVNRLIKQFDEMRRMMKQFTEMMGPKGP 438
Query: 440 K 440
K
Sbjct: 439 K 439
>gi|224084412|ref|XP_002335343.1| predicted protein [Populus trichocarpa]
gi|222833644|gb|EEE72121.1| predicted protein [Populus trichocarpa]
Length = 144
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 123/143 (86%), Positives = 137/143 (95%)
Query: 353 MLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQ 412
MLPGFS+ELMPKG EKESQAKIKRYMTMMDSMTNEELDSSNPKL+NDSR+MRIARG+GR
Sbjct: 1 MLPGFSAELMPKGHEKESQAKIKRYMTMMDSMTNEELDSSNPKLLNDSRMMRIARGAGRP 60
Query: 413 VREVMEMLEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQIGGVG 472
+R+VMEMLEEYKRLAK+WS+MKGLKIP+KGEMS+LSRNMNAQHM+KVLP MLKQ+GG+G
Sbjct: 61 IRDVMEMLEEYKRLAKVWSEMKGLKIPEKGEMSSLSRNMNAQHMNKVLPPQMLKQLGGMG 120
Query: 473 GLQNLMKQMGSTKDMMGMFGGGE 495
GLQNLMKQMGS KDM GMFGGG+
Sbjct: 121 GLQNLMKQMGSAKDMTGMFGGGD 143
>gi|78188776|ref|YP_379114.1| Signal recognition particle protein [Chlorobium chlorochromatii
CaD3]
gi|78170975|gb|ABB28071.1| signal recognition particle subunit FFH/SRP54 (srp54) [Chlorobium
chlorochromatii CaD3]
Length = 451
Score = 255 bits (652), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 151/433 (34%), Positives = 255/433 (58%), Gaps = 13/433 (3%)
Query: 6 LGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDL 65
L + ++++ I+E + + +I RALL ADV +K+ +++ +I++ +++
Sbjct: 7 LSDKLEATFKKLAGQATINEINIGVAMRDIKRALLAADVNYKVAKKLIEDIREKSLGEEV 66
Query: 66 AAGHNKRRIIQQAIFNELCKMLD-PGKP-SFTPKKGKPSVIMFVGLQGSGKTTTCTKYAY 123
+ ++I + +++EL +++ KP + +PKK P++IM GLQGSGKTT C K A
Sbjct: 67 IKSVSPAQMIVKIVYDELTELMGGEQKPLNLSPKK-LPAIIMVAGLQGSGKTTFCAKLAL 125
Query: 124 YHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKEN 183
+K G P L+ AD +R A DQLK + ++P + S E D ++ A++G+E K
Sbjct: 126 RLRKNGKNPMLIAADVYRPAAVDQLKALGEQVEVPVF-SVDEKDAMKAALQGLEAAKAAA 184
Query: 184 CDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSV 243
D++IVDT+GR + + A+ E + A + PD ++FV+DS +GQ A + A+AF +
Sbjct: 185 KDVVIVDTAGRLQIDQAMMAEAEALKNA-LKPDELLFVVDSMMGQEAVNTAKAFNDRLDF 243
Query: 244 GAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSG 303
V++TK+DG A+GG ALS + P+ FI GE +D+ ++F R+LGMGD
Sbjct: 244 DGVVLTKLDGDARGGAALSIRQVVEKPIKFISIGEKVDDLDIFYPDRMAQRILGMGDIIS 303
Query: 304 FMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMP 363
F++K E + +D+ E+ +KL + F L ++Q Q + KMG I + M+PG ++++P
Sbjct: 304 FVEKAQENLDLDKAIEMQKKLMKNEFDLNDFFDQLQQLKKMGSIQGLIEMVPGL-NKMVP 362
Query: 364 KGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLEEY 423
K ++ K M+ SMT EE SNP+++N SR RIARGSGR+V+EV +L+++
Sbjct: 363 K--QELENLDFKPIEAMISSMTKEE--RSNPEMINGSRRQRIARGSGRKVQEVNLLLKQF 418
Query: 424 ---KRLAKIWSKM 433
K++ K SK+
Sbjct: 419 GEMKKMMKAVSKL 431
>gi|161528039|ref|YP_001581865.1| GTP-binding signal recognition particle [Nitrosopumilus maritimus
SCM1]
gi|160339340|gb|ABX12427.1| GTP-binding signal recognition particle SRP54 G- domain
[Nitrosopumilus maritimus SCM1]
Length = 442
Score = 255 bits (652), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 154/435 (35%), Positives = 262/435 (60%), Gaps = 7/435 (1%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L L S+ AI+++ ++ IDE+++ E ++ RALLQ+DV +LV E+ ++++
Sbjct: 1 MLDGLKSSLGDAIKKIVKSSGIDEELIKELSKDVQRALLQSDVNVRLVLEITKHLEERAL 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
+ G +++ I + +++EL +L + F K GK + I+ +G+QGSGKTT +K
Sbjct: 61 NETPPPGLSRKNHIVKILYDELSNLL-GNESEFDFKPGKQNKIILLGIQGSGKTTVASKL 119
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKK 181
A + +G+K +V ADT+R GA QLK K+ + YG + D I G+ FK
Sbjct: 120 AKFLTGQGYKVGVVGADTYRPGALVQLKTMCEKSNVEVYGEESNKDSPSIVKNGLNYFKD 179
Query: 182 ENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSV 241
++ D+I++DT+GRHK+E L EEM ++++ +PDL + V+D +IGQ F+QA+AF +++
Sbjct: 180 QSLDVILIDTAGRHKEEQDLLEEMDRINKVA-DPDLALLVIDGTIGQQCFNQAEAFHKTI 238
Query: 242 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 301
VG VI+TK+D AKGGGAL+A AAT + +++IGTGE +D+ E F FV RLLGMGD
Sbjct: 239 PVGGVIITKLDSSAKGGGALAASAATGAQIMYIGTGERIDDLEKFSPTRFVGRLLGMGDV 298
Query: 302 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 361
+D + + + + + ++++S G + Q + + KMG + + +PG S +
Sbjct: 299 QAVLD-LAKRLESENDDDRMKRISSGKMNMEDFLSQLEEVTKMGSLQGILESMPGLSG-M 356
Query: 362 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPK-LMNDSRIMRIARGSGRQVREVMEML 420
+ + + + ++ ++ ++ SMT +E ++P+ L+N SRI RIARGSG EV E++
Sbjct: 357 VKDDQVNQMEDRVTKWRYIIQSMTTQE--KADPEGLLNSSRIKRIARGSGWPEGEVKELM 414
Query: 421 EEYKRLAKIWSKMKG 435
+ YK + KG
Sbjct: 415 KNYKNSKNMMKASKG 429
>gi|395242479|ref|ZP_10419476.1| Signal recognition particle protein [Lactobacillus pasteurii CRBIP
24.76]
gi|394480211|emb|CCI85716.1| Signal recognition particle protein [Lactobacillus pasteurii CRBIP
24.76]
Length = 476
Score = 255 bits (651), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 148/435 (34%), Positives = 240/435 (55%), Gaps = 7/435 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L I +A++ ++ I E+ +N EI ALL+ADV FK+V++ IK+
Sbjct: 1 MAFENLSERIQKALKNLTGKGKISEEDINTASREIRLALLEADVNFKVVKDFIKKIKQEA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ N + + + + +EL KM+ T K P++IM VGLQG+GKTTT K
Sbjct: 61 LGKEVQESLNPGQQVIKIVNDELTKMMGESSVKLTKSKHIPTIIMMVGLQGTGKTTTVGK 120
Query: 121 YAYYHQK-KGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
AY+ QK + +P L+ D +R A DQLKQ + ++P + E D +I EG+
Sbjct: 121 LAYHLQKTEHARPLLIAGDIYRPAAIDQLKQIGEQLEVPVFSKPDEKDVAKIVEEGLAEA 180
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQ 239
K D +I+DT+GR + + L +E+ +V +A P+ ++ V+D+ GQAA D A+ F +
Sbjct: 181 DKNKNDYVIIDTAGRLEIDEKLMDELERV-KAVAKPENILLVVDAMTGQAATDVARGFDE 239
Query: 240 SVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMG 299
+ V VI+TK+DG +GG ALS A T P+I+ G GE + + E F SR+LGMG
Sbjct: 240 RLDVTGVILTKLDGDTRGGAALSIRAVTGKPIIYTGQGEKLTDLEDFHPDRMASRILGMG 299
Query: 300 DWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSS 359
D ++K + + + ++ +K+ E F +Q + + K+GP+ Q+ M+PG ++
Sbjct: 300 DVLTLIEKAQQDYDVKEAKKVAEKMRENTFDFNDFIDQLEQVQKLGPLDQIMKMIPGMAN 359
Query: 360 ELMPKGREKE-SQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVME 418
P+ + + +I ++ SMT EE NP ++N SR RIA GSGR V EV
Sbjct: 360 N--PQLQNLSIDEKEIAHTKAIVYSMTEEE--RENPDILNPSRRRRIAAGSGRPVVEVNR 415
Query: 419 MLEEYKRLAKIWSKM 433
M++++K+ + SK+
Sbjct: 416 MIKQFKQARDLMSKI 430
>gi|70943991|ref|XP_741976.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56520694|emb|CAH80619.1| hypothetical protein PC000130.04.0 [Plasmodium chabaudi chabaudi]
Length = 201
Score = 254 bits (649), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 117/201 (58%), Positives = 156/201 (77%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
MVL +LG ++ A+Q++ A + D+ V+ ECL EI RAL+ AD+ ++++++NIKK +
Sbjct: 1 MVLTELGAQLTSALQKIQAAPVADDAVIEECLKEIVRALILADINVIYLKDIKSNIKKNI 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ A G+NK+R++Q+ + EL K+L+ K S+ PKKG +VI+FVGLQGSGKTTTCTK
Sbjct: 61 EKNAAAYGNNKKRLVQKYVVEELIKLLEGKKESYVPKKGGRNVILFVGLQGSGKTTTCTK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
YA+Y+QKKG+K AL+CADTFRAGAFDQLKQNA K KIPFYGSY+E DPV+IA +GV F
Sbjct: 121 YAHYYQKKGFKTALICADTFRAGAFDQLKQNAAKVKIPFYGSYSEVDPVKIATDGVNAFL 180
Query: 181 KENCDLIIVDTSGRHKQEAAL 201
K+ DLIIVD+SGRHKQE L
Sbjct: 181 KDKYDLIIVDSSGRHKQENDL 201
>gi|449513469|ref|XP_004164333.1| PREDICTED: signal recognition particle 54 kDa protein 3-like
[Cucumis sativus]
Length = 144
Score = 254 bits (649), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 122/143 (85%), Positives = 139/143 (97%)
Query: 353 MLPGFSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQ 412
MLPG+S++LMPKGREKESQAK+KRYMTMMDSMT+EELDS+NPKL+N+SR+MRIARGSG +
Sbjct: 1 MLPGYSADLMPKGREKESQAKLKRYMTMMDSMTDEELDSTNPKLINESRMMRIARGSGHR 60
Query: 413 VREVMEMLEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPQGMLKQIGGVG 472
V+EVMEM+EEYKRLAK+WSKMKGLKIPKKGEMSALSRNMNAQHMSKVLP +LKQIGG+G
Sbjct: 61 VQEVMEMMEEYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQIGGMG 120
Query: 473 GLQNLMKQMGSTKDMMGMFGGGE 495
GLQ+LMKQMGS KDMMGMFGGG+
Sbjct: 121 GLQSLMKQMGSNKDMMGMFGGGD 143
>gi|421860554|ref|ZP_16292660.1| GTPase [Paenibacillus popilliae ATCC 14706]
gi|410829740|dbj|GAC43097.1| GTPase [Paenibacillus popilliae ATCC 14706]
Length = 457
Score = 254 bits (648), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 149/443 (33%), Positives = 237/443 (53%), Gaps = 7/443 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L G + ++ + E +NE + E+ ALL+ADV FK+V+E +K+
Sbjct: 1 MAFEGLTGRLQNVFGKLRGKGKVTEDDVNEAMREVRLALLEADVNFKVVKEFINKVKEKA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ +I + EL +++ P+VIM GLQG+GKTTT K
Sbjct: 61 VGQEVMKSFTPGMVIVDIVNKELTELMGGTAAKLAKANKPPTVIMMAGLQGAGKTTTSGK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A QK+ KP LV AD +R A QL+ + +P + + PV IA + +E +
Sbjct: 121 LAKLLQKQNHKPLLVAADIYRPAAIKQLEVLGAQINVPVFSLGDQVSPVEIARQAMEHAR 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
+ D +IVDT+GR + AL EE++Q+ E TVNPD V+ V+D+ GQ A + A++F Q
Sbjct: 181 VNHLDYVIVDTAGRLHIDEALMEELKQIHE-TVNPDEVLLVVDAMTGQDAVNVAESFNQQ 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
+++ V++TK+DG +GG ALS A T P+ F GE +D E F + SR+LGMGD
Sbjct: 240 LALTGVVLTKLDGDTRGGAALSVKAVTGCPIKFAALGEKIDALEPFHPERMASRILGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
++K + D+ E+ K+ FT EQ Q + ++GPI Q+ M+PG + +
Sbjct: 300 MLSLIEKAQANIDADKAKEMEMKMRNAAFTFDDFLEQMQQVKQLGPIDQILDMIPGMN-K 358
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEML 420
+ K + ++ R ++ SMTN+E +P ++N SR RIA GSG + +V ++
Sbjct: 359 MKQTANLKVDERQMGRIEAIVRSMTNKE--RQDPDMINHSRRKRIAAGSGTSLADVNRLI 416
Query: 421 ---EEYKRLAKIWSKMKGLKIPK 440
+E +R+ K +++M G K PK
Sbjct: 417 KQFDEMRRMMKQFTEMMGPKGPK 439
>gi|125973288|ref|YP_001037198.1| signal recognition particle subunit FFH/SRP54 (srp54) [Clostridium
thermocellum ATCC 27405]
gi|256003768|ref|ZP_05428756.1| signal recognition particle protein [Clostridium thermocellum DSM
2360]
gi|281417492|ref|ZP_06248512.1| signal recognition particle protein [Clostridium thermocellum JW20]
gi|385778800|ref|YP_005687965.1| signal recognition particle protein [Clostridium thermocellum DSM
1313]
gi|419723183|ref|ZP_14250318.1| signal recognition particle protein [Clostridium thermocellum AD2]
gi|419724913|ref|ZP_14251968.1| signal recognition particle protein [Clostridium thermocellum YS]
gi|125713513|gb|ABN52005.1| signal recognition particle protein [Clostridium thermocellum ATCC
27405]
gi|255992329|gb|EEU02423.1| signal recognition particle protein [Clostridium thermocellum DSM
2360]
gi|281408894|gb|EFB39152.1| signal recognition particle protein [Clostridium thermocellum JW20]
gi|316940480|gb|ADU74514.1| signal recognition particle protein [Clostridium thermocellum DSM
1313]
gi|380771533|gb|EIC05398.1| signal recognition particle protein [Clostridium thermocellum YS]
gi|380780950|gb|EIC10613.1| signal recognition particle protein [Clostridium thermocellum AD2]
Length = 446
Score = 254 bits (648), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 155/424 (36%), Positives = 233/424 (54%), Gaps = 13/424 (3%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNI-KKI 59
M+ L G + A++++ + EK + E + EI ALL+ADV FK+V++ + ++
Sbjct: 1 MLFEGLSGKLQEAMKKLRGKGRVTEKDVKEMMREIKLALLEADVNFKVVKDFIGKVSERA 60
Query: 60 VN---LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTT 116
V L+ L G +I+ + EL ++ T P++ M VGLQGSGKTT
Sbjct: 61 VGQEVLESLTPGQQVIKIVHE----ELINLMGSANSKVTFSSKPPTIYMMVGLQGSGKTT 116
Query: 117 TCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGV 176
T K A +K+G KP LV D +R A QL+ ++ I + +++PV IA V
Sbjct: 117 TSGKLANLLRKQGKKPLLVACDVYRPAAIKQLQVVGSQLGIEVFSMGDKTNPVDIAKAAV 176
Query: 177 ETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQA 236
E K DL+I+DT+GR L EE++ + EA V P ++ V+DS GQ A + A++
Sbjct: 177 EYAKSRQYDLVIIDTAGRLHINEELMEELQNIKEA-VRPQEILLVVDSMTGQDAVNVAES 235
Query: 237 FKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLL 296
F + + V +I+TK+DG +GG ALS A T P+ FIG GE +++ E F SR+L
Sbjct: 236 FNEKLGVDGIILTKLDGDTRGGAALSVKAVTGKPIKFIGMGEKLNDIEPFFPDRMASRIL 295
Query: 297 GMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPG 356
GMGD ++K E + EL +K+ FTL EQ Q I KMGP+ Q+ +M+PG
Sbjct: 296 GMGDVLSLIEKAQEAFDEKKALELEKKMRTQQFTLEDFLEQMQQIKKMGPLNQLLAMIPG 355
Query: 357 FSSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREV 416
F++ +M E K+ R ++ SMT EE +NP ++N SR RIA GSG V+EV
Sbjct: 356 FNANVMKDIELDEK--KMARVEAIIKSMTKEE--RNNPSIINGSRRKRIAAGSGTTVQEV 411
Query: 417 MEML 420
++L
Sbjct: 412 NKLL 415
>gi|407464403|ref|YP_006775285.1| GTP-binding signal recognition particle [Candidatus Nitrosopumilus
sp. AR2]
gi|407047591|gb|AFS82343.1| GTP-binding signal recognition particle [Candidatus Nitrosopumilus
sp. AR2]
Length = 441
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 155/435 (35%), Positives = 261/435 (60%), Gaps = 8/435 (1%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L L S+ AI+++ ++ IDE+++ E ++ RALLQ+DV +LV E+ ++++
Sbjct: 1 MLDGLKNSLGDAIKKIVKSSGIDEELIKELSKDVQRALLQSDVNVRLVLEITKHLEERAL 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
+ G +++ I + +++EL K+L + F K GK + I+ +G+QGSGKTT +K
Sbjct: 61 NETPPPGLSRKDHIVKILYDELSKLLG-NESEFDFKPGKQNKIILLGIQGSGKTTVASKL 119
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKK 181
A + ++G+K +V ADT+R GA QLK K+ + YG D I G++ F
Sbjct: 120 AKFLTRQGYKVGVVGADTYRPGALVQLKTMCEKSNVEVYGEENNKDSPSIVKNGLKHFAG 179
Query: 182 ENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSV 241
+ D+I++DT+GRHK+E L EEM ++++ +PDL + V+D +IGQ F+QA+AF +++
Sbjct: 180 QPLDVILIDTAGRHKEEKDLLEEMDRINKVA-DPDLALLVIDGTIGQQCFNQAEAFHKTI 238
Query: 242 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 301
VG VI+TK+D AKGGGAL+A AAT + +++IGTGE +D+ E F FV RLLGMGD
Sbjct: 239 PVGGVIITKLDSSAKGGGALAASAATGAQIMYIGTGERIDDLEKFSPTRFVGRLLGMGDI 298
Query: 302 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 361
+D + + + + ++++S G + + Q + + K+G + + +PG S
Sbjct: 299 QAVLD-LAKRLENEGDDVRMKRISSGKMNMDDFFYQLEEVTKVGSLQGLLDSMPGLSG-- 355
Query: 362 MPKGRE-KESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEML 420
M KG + + + ++ ++ ++ SMT E ++P L+N SRI RI+RGSG EV E++
Sbjct: 356 MVKGDQVNQMEGRVSKWRYIIQSMTKAE--KADPDLLNSSRIKRISRGSGWPEGEVKELI 413
Query: 421 EEYKRLAKIWSKMKG 435
+ YK + KG
Sbjct: 414 KNYKNSKNMMKASKG 428
>gi|284047845|ref|YP_003398184.1| signal recognition particle protein [Acidaminococcus fermentans DSM
20731]
gi|283952066|gb|ADB46869.1| signal recognition particle protein [Acidaminococcus fermentans DSM
20731]
Length = 448
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 147/446 (32%), Positives = 246/446 (55%), Gaps = 10/446 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L ++ AIQ++ + E+ L E L E+ ALL+ADV FK+V+E I++
Sbjct: 1 MAFEILTDKLTAAIQKLRGQKTVSEQDLKETLREVRLALLEADVNFKVVKEFTAKIRERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ + I + + EL ++L + P+VIM VGLQG+GKTTT K
Sbjct: 61 MGQQVDPNLTPGQYIVKIVHEELIELLGGTQSKLNVAANPPTVIMLVGLQGAGKTTTVGK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A Y +K G KP +V D +R A QL+ + +P + + PV IA E ++
Sbjct: 121 LANYLRKNGKKPLMVAGDVYRPAAITQLEVIGKQLDMPVFSMGDQVSPVEIARESLKRAN 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
CD +++DT+GR + L E++ + A VNPD ++ V+D+ GQ A A +F ++
Sbjct: 181 ALLCDTVLIDTAGRLHVDETLMNELKDMKTA-VNPDEILLVVDAMTGQDAVTVADSFNKA 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
+ + +IVTK+DG A+GG LS A T PV F+G GE +D + F SR+LGMGD
Sbjct: 240 LGITGLIVTKLDGDARGGAVLSVKAVTNCPVKFVGMGEKLDALQPFYPDRMASRILGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPG---F 357
++K E + +D ++ + L + FTL + +Q + + K+G + + SM+PG F
Sbjct: 300 VLSLIEKAQEAIDVDSAKKMAESLKKNEFTLDMFLDQMKQVKKLGSLESILSMIPGMGKF 359
Query: 358 SSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVM 417
+ +L +G + + + +++R ++ SMT +E NP+++N SR RIA G G++V++V
Sbjct: 360 AKQL--EGVDLDGK-EVRRLEAIIYSMTPQE--RQNPRIINGSRRKRIAAGCGQRVQDVN 414
Query: 418 EMLEEYKRLAKIWSKMKGL-KIPKKG 442
+L++++ K+ M+G+ K +KG
Sbjct: 415 RLLKQFEESKKLMKTMQGMNKYARKG 440
>gi|386875341|ref|ZP_10117516.1| signal peptide binding domain protein [Candidatus Nitrosopumilus
salaria BD31]
gi|386806843|gb|EIJ66287.1| signal peptide binding domain protein [Candidatus Nitrosopumilus
salaria BD31]
Length = 441
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 151/434 (34%), Positives = 262/434 (60%), Gaps = 6/434 (1%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L L S+S AI+++ ++ IDE+++ E ++ RALLQ+DV +LV ++ ++++
Sbjct: 1 MLDGLKNSLSDAIKKIVKSSGIDEELIKELSKDVQRALLQSDVNVRLVLDITKHLEERAL 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
+ G +++ I + +++EL K+L + F K G + I+ +G+QGSGKTT +K
Sbjct: 61 NEIPPPGLSRKDHIIKILYDELSKLL-GNESDFNFKPGTQNKIILLGIQGSGKTTVASKL 119
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKK 181
A + ++G+K ++ ADT+R GA QLK K+ + YG + D I G++ F+
Sbjct: 120 AKFLSRQGYKVGVIGADTYRPGALVQLKTMCEKSNVEVYGEESNKDSPNIVKNGLKHFEG 179
Query: 182 ENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSV 241
+ D+I++DT+GRHK+E L EEM ++++ +PDL + V+D +IGQ F+QA+AF ++
Sbjct: 180 QPLDVILIDTAGRHKEEKDLLEEMERINKVA-DPDLALLVIDGTIGQQCFNQAEAFHNTI 238
Query: 242 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 301
VG +I+TK+D AKGGGAL+A AAT + +++IGTGE +D+ E F FV RLLGMGD
Sbjct: 239 PVGGIIITKLDSSAKGGGALAASAATGAQIMYIGTGERIDDLEKFSPTRFVGRLLGMGDI 298
Query: 302 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 361
+D + + + + ++++S G + + Q + + K+G + + +PG S +
Sbjct: 299 QAVLD-LAKRLENEGDDVRMKRISSGKMNMDDFFYQLEEVTKVGSLKGLLDSMPGLSG-M 356
Query: 362 MPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLE 421
+ + + + ++ ++ ++ SMT EE ++P L+N SRI RIARGSG EV E+++
Sbjct: 357 VKNDQVDQMEDRVSKWRYIIQSMTKEE--KADPDLLNSSRIKRIARGSGWPEGEVKELVK 414
Query: 422 EYKRLAKIWSKMKG 435
YK + KG
Sbjct: 415 NYKNSKNMMKASKG 428
>gi|302872185|ref|YP_003840821.1| signal recognition particle protein [Caldicellulosiruptor
obsidiansis OB47]
gi|302575044|gb|ADL42835.1| signal recognition particle protein [Caldicellulosiruptor
obsidiansis OB47]
Length = 443
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 149/424 (35%), Positives = 237/424 (55%), Gaps = 11/424 (2%)
Query: 23 IDEKVLNECLNEITRALLQADVQFKLVRE-MQTNIKKIVNLDDLAAGHNKRRIIQQAIFN 81
+ EK + E + E+ ALL+ADV +K+V++ + T +K V + L + +++I+ +++
Sbjct: 22 LTEKDIKEAMKEVKLALLEADVNYKVVKDFINTVTQKAVGEEVLESLTPAQQVIK-IVYD 80
Query: 82 ELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFR 141
E+ +L T S+ M VGLQGSGKTTT K A +K+G P+LV D +R
Sbjct: 81 EMVNLLGGSDTKLTFSPSGFSIYMMVGLQGSGKTTTAGKLAGLLKKQGKNPSLVACDIYR 140
Query: 142 AGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAAL 201
A QL+ A K + Y YT D V+IA +G+E K D++I+DT+GR L
Sbjct: 141 PAAIKQLEVVAQKVGVKCYADYTSQDAVKIAKDGIEFAKSNRSDVVIIDTAGRLHINQEL 200
Query: 202 FEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGAL 261
+E++ + A V P ++ V+D+ GQ A + A+AF + + +I+TK+DG +GG AL
Sbjct: 201 MDELKNIKNA-VKPTEILLVVDAMTGQDAVNVAEAFNDQLGIDGIIMTKLDGDTRGGAAL 259
Query: 262 SAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELL 321
S A T P+ F G GE M++ EVF SR+LGMGD ++K E + + EL
Sbjct: 260 SVKAITGKPIKFAGVGEKMEDLEVFHPDRMASRILGMGDVLTLIEKAQEAIDQKKAEELE 319
Query: 322 QKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPG--FSSELMPKGREKESQAKIKRYMT 379
+KL FTL +Q + I KMGP+ Q+ SM+PG ++ EKE +K+
Sbjct: 320 KKLRSMQFTLEDFLDQLKQIKKMGPLSQIISMIPGIKLKGDVDFDAGEKE----LKKIEA 375
Query: 380 MMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLKIP 439
+++SMT EE +P ++N SR RIA GSG V++V +L++++ + ++ +
Sbjct: 376 IINSMTKEE--RQDPSIINSSRKRRIAMGSGTTVQDVNRLLKQFEDMKRMMKQFSNPSFA 433
Query: 440 KKGE 443
KKG+
Sbjct: 434 KKGK 437
>gi|407462068|ref|YP_006773385.1| GTP-binding signal recognition particle [Candidatus Nitrosopumilus
koreensis AR1]
gi|407045690|gb|AFS80443.1| GTP-binding signal recognition particle [Candidatus Nitrosopumilus
koreensis AR1]
Length = 441
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 154/435 (35%), Positives = 262/435 (60%), Gaps = 8/435 (1%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L L S+ AI+++ ++ IDE+++ E ++ RALLQ+DV +LV E+ ++++
Sbjct: 1 MLDGLKSSLGDAIKKIVKSSGIDEELIKELSKDVQRALLQSDVNVRLVLEITKHLEERAL 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
+ G +++ I + +++EL +L + F K GK + I+ +G+QGSGKTT +K
Sbjct: 61 NETPPPGLSRKDHIVKILYDELSSLLG-NESEFDFKPGKQNKIILLGIQGSGKTTVASKL 119
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKK 181
A + ++G+K ++ ADT+R GA QLK K+ + YG D I G++ ++
Sbjct: 120 AKFLTRQGYKVGVIGADTYRPGALVQLKTMCEKSNVEVYGEENNKDSPSIVKNGLKHYEG 179
Query: 182 ENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSV 241
+ D+I++DT+GRHK+E L EEM ++++ +PDL + V+D +IGQ F+QA+AF +++
Sbjct: 180 QPLDVILIDTAGRHKEEQDLLEEMDRINK-IADPDLALLVIDGTIGQQCFNQAEAFHKTI 238
Query: 242 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 301
VG VI+TK+D AKGGGAL+A AAT + +++IGTGE +D+ E F FV RLLGMGD
Sbjct: 239 PVGGVIITKLDSSAKGGGALAASAATGAQIMYIGTGERIDDLEKFSPTRFVGRLLGMGDV 298
Query: 302 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSEL 361
+D + + + + ++++S G + + Q + + K+G + + +PG S
Sbjct: 299 QAVLD-LAKRLENEGDDVRMKRISSGKMNMDDFFYQLEEVTKVGSLQGLLESMPGLSG-- 355
Query: 362 MPKGRE-KESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEML 420
M KG + + + ++ ++ ++ SMT EE ++P L+N SRI RIARGSG EV E++
Sbjct: 356 MVKGDQVNQMEDRVSKWRYIIQSMTKEE--KADPDLLNSSRIKRIARGSGWPEGEVKELI 413
Query: 421 EEYKRLAKIWSKMKG 435
+ YK + KG
Sbjct: 414 KNYKNSKNMMKASKG 428
>gi|395238273|ref|ZP_10416210.1| Signal recognition particle protein [Lactobacillus gigeriorum CRBIP
24.85]
gi|394477845|emb|CCI86187.1| Signal recognition particle protein [Lactobacillus gigeriorum CRBIP
24.85]
Length = 476
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 145/434 (33%), Positives = 237/434 (54%), Gaps = 5/434 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L I +A++ ++ I E+ +N EI ALL+ADV FK+V++ IK+
Sbjct: 1 MAFENLSERIQKALRNLTGKGKISEEDINAASREIRLALLEADVNFKVVKDFIKKIKQEA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ N + + + + EL KM+ + T K P+++M VGLQG+GKTTT K
Sbjct: 61 LGKEVQESLNPGQQVIKIVNEELTKMMGESATTLTKSKHIPTIVMMVGLQGTGKTTTVGK 120
Query: 121 YAYYHQK-KGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
AY+ QK + +P L+ D +R A DQLKQ + +P Y E D +I G+
Sbjct: 121 LAYHLQKTEHARPLLIAGDIYRPAAVDQLKQIGQQLNVPVYSEENEKDVSQIVARGLAEA 180
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQ 239
K D +++DT+GR + + L EE+ +V +A +PD ++ V+D+ GQAA D A+ F +
Sbjct: 181 DKNKNDYVLIDTAGRLEIDEPLMEELEKV-KAVAHPDNILLVVDAMTGQAATDVAKGFDE 239
Query: 240 SVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMG 299
+ V VI+TK+DG +GG ALS A T P+I+ G GE + + E F SR+LGMG
Sbjct: 240 RLDVTGVILTKLDGDTRGGAALSIRAVTGKPIIYTGQGEKLTDLEDFHPDRMASRILGMG 299
Query: 300 DWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSS 359
D +++ + + ++ +K+ E F +Q + + KMGP+ Q+ M+PG ++
Sbjct: 300 DVLTLIERAQQDYDAKEAQKVAKKMRENTFDFNDFIDQLEQVQKMGPLDQIMKMIPGMAN 359
Query: 360 ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEM 419
+ + + +I ++ SMT E + +P ++N SR RIA GSGR V EV M
Sbjct: 360 NPQLQNLSIDEK-QIAHTKAIVYSMT--EAERQDPDILNPSRRRRIAAGSGRPVVEVNRM 416
Query: 420 LEEYKRLAKIWSKM 433
++++K+ + SK+
Sbjct: 417 IKQFKQARDLMSKI 430
>gi|226313205|ref|YP_002773099.1| signal recognition particle protein fifty-four homolog
[Brevibacillus brevis NBRC 100599]
gi|226096153|dbj|BAH44595.1| signal recognition particle protein fifty-four homolog
[Brevibacillus brevis NBRC 100599]
Length = 470
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 140/435 (32%), Positives = 231/435 (53%), Gaps = 6/435 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L + A ++ IDE ++NE + E+ ALL+ADV FK+V++ +K+
Sbjct: 1 MAFESLANRLQNAFDKLRGRGKIDETIVNEAMREVRLALLEADVNFKVVKDFVARVKERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ +++ + + EL ++ T P+VIM GLQG+GKTTT K
Sbjct: 61 VGQEVMKSLTPGQMVIKIVNEELVALMGGNVAQLTMAHRPPTVIMMAGLQGAGKTTTTGK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A Y QK+ KP LV D +R A QL+ + +P + + PV IA + +E K
Sbjct: 121 LAKYLQKQNRKPLLVAGDIYRPAAIKQLQVLGEQLNVPVFTLGDQVSPVEIARQAIEHAK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
+ D++++DT+GR + AL +E++Q+ E T PD ++ V+D+ GQ A + A++F
Sbjct: 181 TNHLDVVLIDTAGRLHIDEALMDELKQIREVT-KPDEILLVVDAMTGQDAVNVAESFNSQ 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
+ + V++TK+DG +GG ALS A T P+ F GE +D E F SR+LGMGD
Sbjct: 240 LELTGVVLTKLDGDTRGGAALSVKAVTGKPIKFAAMGEKLDALEPFHPDRMASRILGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
++K V D+ ++ +++ +G FT + + Q + +GP + MLPG +
Sbjct: 300 VLSLIEKAQASVDEDKARDMERQMRQGEFTFDMFLDSMQQLRNLGPFEDILGMLPGMNKM 359
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEML 420
KG+ + +I R + SMT +E +NP L+N SR RIA GSG ++EV L
Sbjct: 360 ---KGKMNVDEKQIARVEAIAKSMTKQE--RANPDLLNASRRKRIASGSGTSIQEVNRFL 414
Query: 421 EEYKRLAKIWSKMKG 435
++++ + K+ + G
Sbjct: 415 KQFEEMKKMMKQFSG 429
>gi|227824776|ref|ZP_03989608.1| signal recognition particle protein [Acidaminococcus sp. D21]
gi|226905275|gb|EEH91193.1| signal recognition particle protein [Acidaminococcus sp. D21]
Length = 448
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 145/446 (32%), Positives = 245/446 (54%), Gaps = 10/446 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L ++ AIQ++ + E+ L E L ++ ALL+ADV FK+V+E T IK+ V
Sbjct: 1 MAFEMLTDKLTAAIQKIRGQKTVTEQDLKETLRDVRLALLEADVNFKVVKEFTTKIKERV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ + I + + EL +L + P+VIM GLQG+GKTT+ K
Sbjct: 61 QGQKIDPNLTAGQYIVKVVHEELIALLGGEQSKLQFSSNPPTVIMLAGLQGAGKTTSIGK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A Y +K G KP +V D +R A QL+ + +P + +E PV IA E ++
Sbjct: 121 LANYLRKNGKKPLMVAGDVYRPAAITQLEVIGKELDMPVFSMGSEVSPVTIAQEAIKRAN 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
CD +++DT+GR + L +E++ + A V+PD ++ V+D+ GQ A A+AF ++
Sbjct: 181 ALLCDTVLIDTAGRLHIDEKLMDELKNIKSA-VHPDEILLVVDAMTGQDAVTVAEAFNKA 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
+ + +IVTK+DG A+GG LS + PV F+G GE +D + F SR+LGMGD
Sbjct: 240 LGITGLIVTKLDGDARGGAVLSVKSVADCPVKFVGMGEKLDALQPFYPDRMASRILGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPG---F 357
++K E + +D L + + FTL + +Q + + ++G + + SM+PG F
Sbjct: 300 VLSLIEKAQEAIDVDSAKRLAESMKHNEFTLDMFLDQMKQVKRLGSLESILSMIPGMGKF 359
Query: 358 SSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVM 417
S + +G + + + +++R ++ SMT +E NP+++N SR RIA G G++V++V
Sbjct: 360 SKQF--EGVDLDGK-EVRRLEAIITSMTPKE--RQNPRIINGSRRKRIAAGCGQRVQDVN 414
Query: 418 EMLEEYKRLAKIWSKMKGL-KIPKKG 442
+L++++ K+ M+G+ K +KG
Sbjct: 415 RLLKQFEESKKLMKTMQGMNKYARKG 440
>gi|407795762|ref|ZP_11142720.1| signal recognition particle protein [Salimicrobium sp. MJ3]
gi|407020103|gb|EKE32817.1| signal recognition particle protein [Salimicrobium sp. MJ3]
Length = 446
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 161/450 (35%), Positives = 243/450 (54%), Gaps = 26/450 (5%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L + IQ++ ++E+ + E E+ ALL+ADV FK+V++ IKKI
Sbjct: 1 MAFEGLSDRLQGTIQKIKGKGKVNEQDVKEMTREVRLALLEADVNFKVVKDF---IKKIR 57
Query: 61 N-------LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSG 113
++ L G +I+++ EL +++ + K P+VIM VGLQG+G
Sbjct: 58 ERAVGQEVMESLTPGQQVIKIVKE----ELSELMGGDESRIAVAKKPPTVIMMVGLQGAG 113
Query: 114 KTTTCTKYAYYHQKK-GWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIA 172
KTTT K A +K KP L AD +R A DQL+ + P Y T++DPV IA
Sbjct: 114 KTTTAGKLANLLRKSYNRKPMLAAADVYRPAAIDQLETIGKQLDFPVYSEGTDADPVDIA 173
Query: 173 VEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFD 232
+ VE K++N D +I+DT+GR + L E+ +V EA VNPD + V+D+ GQ A +
Sbjct: 174 RQAVEEAKEQNHDYLIIDTAGRLHIDGELMGELGRVKEA-VNPDEIFLVVDAMTGQDAVN 232
Query: 233 QAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFV 292
A++F + + + V++TK+DG +GG ALS A T P+ F+G GE +D EVF +
Sbjct: 233 VAESFDEQLDISGVLLTKLDGDTRGGAALSIKAVTGKPIKFVGMGEKLDALEVFHPERMA 292
Query: 293 SRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFS 352
SR+LGMGD ++K V Q EL K+ +FT EQ + MGP+ ++
Sbjct: 293 SRILGMGDMLSLIEKAETQVDEKQAKELEAKMRNASFTFDDFLEQMAQVKNMGPLDEIIE 352
Query: 353 MLPGFSSELMPKGREKES--QAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSG 410
M+PG S KG + S +I ++ SMT +E ++P +MN SR RIA+GSG
Sbjct: 353 MIPGASK---MKGLKNASFDDKQIVHVEAIIQSMTKKE--RNDPSVMNASRKKRIAKGSG 407
Query: 411 RQVREVMEMLEEY---KRLAKIWSKMKGLK 437
V EV +L+++ K++ K +S KG K
Sbjct: 408 TSVSEVNRLLKQFNEMKKMMKQFSNQKGKK 437
>gi|398814569|ref|ZP_10573250.1| signal recognition particle protein [Brevibacillus sp. BC25]
gi|398036838|gb|EJL30047.1| signal recognition particle protein [Brevibacillus sp. BC25]
Length = 470
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 140/435 (32%), Positives = 231/435 (53%), Gaps = 6/435 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L + A ++ IDE ++NE + E+ ALL+ADV FK+V++ +K+
Sbjct: 1 MAFESLANRLQNAFDKLRGRGKIDETIVNEAMREVRLALLEADVNFKVVKDFVARVKERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ +++ + + EL ++ T P+VIM GLQG+GKTTT K
Sbjct: 61 VGQEVMKSLTPGQMVIKIVNEELVALMGGNVAQLTMAHRPPTVIMMAGLQGAGKTTTTGK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A Y QK+ KP LV D +R A QL+ + +P + + PV IA + +E K
Sbjct: 121 LAKYLQKQNRKPLLVAGDIYRPAAIKQLQVLGDQLNVPVFTLGDQVSPVEIARQAIEHAK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
+ D++++DT+GR + AL +E++Q+ E T PD ++ V+DS GQ A + A++F
Sbjct: 181 TNHLDVVLIDTAGRLHIDEALMDELKQIREVT-KPDEILLVVDSMTGQDAVNVAESFNSQ 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
+ + V++TK+DG +GG ALS A T P+ F GE +D E F SR+LGMGD
Sbjct: 240 LELTGVVLTKLDGDTRGGAALSVKAVTGKPIKFAAMGEKLDALEPFHPDRMASRILGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
++K V D+ ++ +++ +G FT + + Q + +GP + MLPG +
Sbjct: 300 VLSLIEKAQASVDEDKARDMERQMRQGEFTFDMFLDSMQQLRNLGPFEDILGMLPGMNKM 359
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEML 420
KG+ + +I R + SMT +E +NP L+N +R RIA GSG ++EV L
Sbjct: 360 ---KGKMNVDEKQIARVEAIAKSMTKQE--RANPDLLNANRRKRIASGSGTSIQEVNRFL 414
Query: 421 EEYKRLAKIWSKMKG 435
++++ + K+ + G
Sbjct: 415 KQFEEMKKMMKQFSG 429
>gi|352683795|ref|YP_004895779.1| signal recognition particle protein [Acidaminococcus intestini
RyC-MR95]
gi|350278449|gb|AEQ21639.1| signal recognition particle protein [Acidaminococcus intestini
RyC-MR95]
Length = 448
Score = 252 bits (644), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 145/446 (32%), Positives = 245/446 (54%), Gaps = 10/446 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L ++ AIQ++ + E+ L E L ++ ALL+ADV FK+V+E T IK+ V
Sbjct: 1 MAFEMLTDKLTAAIQKIRGQKTVTEQDLKETLRDVRLALLEADVNFKVVKEFTTKIKERV 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ + I + + EL +L + P+VIM GLQG+GKTT+ K
Sbjct: 61 QGQKIDPNLTAGQYIVKVVHEELIALLGGEQSKLQFSSNPPTVIMLAGLQGAGKTTSIGK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A Y +K G KP +V D +R A QL+ + +P + +E PV IA E ++
Sbjct: 121 LANYLRKNGKKPLMVAGDVYRPAAITQLEVIGKELDMPVFSMGSEVSPVTIAQEAIKRAN 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
CD +++DT+GR + L +E++ + A V+PD ++ V+D+ GQ A A+AF ++
Sbjct: 181 ALLCDTVLIDTAGRLHIDEKLMDELKNIKTA-VHPDEILLVVDAMTGQDAVTVAEAFNKA 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
+ + +IVTK+DG A+GG LS + PV F+G GE +D + F SR+LGMGD
Sbjct: 240 LGITGLIVTKLDGDARGGAVLSVKSVADCPVKFVGMGEKLDALQPFYPDRMASRILGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPG---F 357
++K E + +D L + + FTL + +Q + + ++G + + SM+PG F
Sbjct: 300 VLSLIEKAQEAIDVDSAKRLAESMKHNEFTLDMFLDQMKQVKRLGSLESILSMIPGMGKF 359
Query: 358 SSELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVM 417
S + +G + + + +++R ++ SMT +E NP+++N SR RIA G G++V++V
Sbjct: 360 SKQF--EGVDLDGK-EVRRLEAIITSMTPKE--RQNPRIINGSRRKRIAAGCGQRVQDVN 414
Query: 418 EMLEEYKRLAKIWSKMKGL-KIPKKG 442
+L++++ K+ M+G+ K +KG
Sbjct: 415 RLLKQFEESKKLMKTMQGMNKYARKG 440
>gi|444912237|ref|ZP_21232402.1| Signal recognition particle, subunit Ffh SRP54 [Cystobacter fuscus
DSM 2262]
gi|444717145|gb|ELW57980.1| Signal recognition particle, subunit Ffh SRP54 [Cystobacter fuscus
DSM 2262]
Length = 542
Score = 252 bits (644), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 165/484 (34%), Positives = 260/484 (53%), Gaps = 31/484 (6%)
Query: 13 AIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKK-----IVNLDDLAA 67
A +++ + I ++++E L +I +LL+ADV F +V++ +++ +V
Sbjct: 12 AKNRLAGKSEITPEMVDESLRDIRVSLLEADVAFDVVKKFVARVREKAVGEVVQTTITDK 71
Query: 68 GHNKRRIIQQAIFNELCK-----MLDPGKPSFTPK-KGKPSVIMFVGLQGSGKTTTCTKY 121
NKRR+ F ++C ++ P S K + + S IM VGLQGSGKTTT K
Sbjct: 72 AGNKRRVSAGDHFVKICHDELEALMGPVDTSLQLKPRDQLSGIMMVGLQGSGKTTTTGKL 131
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKK 181
A K+G KP LV AD +R A DQLK + K+P Y + P +A G ++
Sbjct: 132 ASKLLKEGRKPLLVAADIYRPAAVDQLKVLGERLKVPVYFEPNVAPP-ELARRGYAAARE 190
Query: 182 ENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSV 241
+ CD++++DT+GR + AL E+ + + V PD ++ V D+ IGQ A A F + +
Sbjct: 191 QKCDVVLIDTAGRLAIDEALMTELEAI-KGQVRPDNILLVCDAMIGQDAVRTAAEFDRRL 249
Query: 242 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 301
S+ I+TK+DG A+GG ALS T P+ F+G GE MD+ E F SR+LG GD
Sbjct: 250 SLDGFILTKLDGDARGGAALSIKEVTGKPIKFLGMGESMDKLEEFRPDGLASRILGFGDI 309
Query: 302 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGF---S 358
G M +VV + E QKL GNFT++ Q + + KMGP+ + P F +
Sbjct: 310 VGLMKDFEQVVDEKKAAEDAQKLLSGNFTMKDFVGQIRMVRKMGPLKDLLEKFPLFGEMT 369
Query: 359 SELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVME 418
+L P + ++ + +M DSMT +E P+++NDSR+ RIA+GSGR+ EV E
Sbjct: 370 EQLNP------DETELTKIESMYDSMTEQE--RLRPQIINDSRVKRIAKGSGRKTEEVRE 421
Query: 419 MLEEYKRLAKIWSKM---KGL--KIPKKGEMSALS--RNMNAQHMSKVLPQGMLKQIGGV 471
+L+++ + ++ + GL +IP +M L+ +NM+ M P+ M K + G+
Sbjct: 422 LLQKFGMMQQVMGTIGQNPGLLGRIPGFKQMGQLAQMKNMDLSSMFGKDPKMMEKAMAGM 481
Query: 472 GGLQ 475
GG+Q
Sbjct: 482 GGMQ 485
>gi|338730579|ref|YP_004659971.1| signal recognition particle subunit FFH/SRP54 (srp54) [Thermotoga
thermarum DSM 5069]
gi|335364930|gb|AEH50875.1| signal recognition particle subunit FFH/SRP54 (srp54) [Thermotoga
thermarum DSM 5069]
Length = 433
Score = 252 bits (644), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 154/440 (35%), Positives = 249/440 (56%), Gaps = 14/440 (3%)
Query: 5 QLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDD 64
+L +S+ + +S I EK + E + ++ +LL+ADV FK+V+E ++K ++
Sbjct: 4 RLQEKLSKIFRSLSGRGKITEKNIEEAVKQVKISLLEADVNFKVVKEFVESVKAKALGEE 63
Query: 65 LAAGHNKRRIIQQAIFNELCKMLDPGK-PSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAY 123
+ + + I +EL +L G+ PS K P++IM VGLQGSGKTTT K A
Sbjct: 64 VLRSLTPDQQFIKIIRDELISIL--GRHPSTLNLKHHPAIIMIVGLQGSGKTTTAAKLAL 121
Query: 124 YHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKEN 183
Y +K G P LV ADT+R A DQL++ IP + + +P++I E + K
Sbjct: 122 YLKKNGRNPILVAADTYRPAAIDQLEKLGKSINIPVF-TGDRKNPLKIVEEALSFAKNSQ 180
Query: 184 CDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSV 243
+++I+DT+GR + + EE+ ++ T NPD ++ V+D+ +GQ A + A F + +++
Sbjct: 181 YNVVIMDTAGRLHIDDEMMEELEKIKNIT-NPDEILMVVDAMVGQDAVNSALEFDKRLNL 239
Query: 244 GAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSG 303
IV+KMDG A+GG LS T PV FIGTGE +D E F + VSR+LGMGD
Sbjct: 240 TGFIVSKMDGDARGGVILSISYVTGKPVKFIGTGEKVDALEPFYAERIVSRILGMGDVLT 299
Query: 304 FMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMP 363
++K + + + E+ +K+ FTL EQ + K+GP+ + +LPG P
Sbjct: 300 LIEKAEKELDKQKMEEIGKKILHAEFTLEDFKEQLAEMKKLGPLSSILELLPG-----AP 354
Query: 364 KGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLEEY 423
K + S+A +K+ +++SMT EE NP+++N SR +RIA+GSG V++V ++L+ Y
Sbjct: 355 KIDLEASEAWLKKVEAIINSMTKEE--RRNPRIINASRKLRIAKGSGTTVQDVNKLLKSY 412
Query: 424 KRLAKIWSKMK--GLKIPKK 441
+ + ++ + K LK P K
Sbjct: 413 EEMKELMKRFKQGKLKFPFK 432
>gi|158522321|ref|YP_001530191.1| signal recognition particle protein [Desulfococcus oleovorans Hxd3]
gi|158511147|gb|ABW68114.1| signal recognition particle protein [Desulfococcus oleovorans Hxd3]
Length = 443
Score = 252 bits (643), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 146/429 (34%), Positives = 242/429 (56%), Gaps = 6/429 (1%)
Query: 6 LGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIK-KIVNLDD 64
L ++ +++ + EK +++ L E+ ALL+ADV +++V++ +I+ + V D
Sbjct: 5 LSDKLNSVFKKLKGQGTLTEKNIDDGLKEVRFALLEADVHYRIVKQFIADIRERAVGADV 64
Query: 65 LAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYY 124
L + +++I+ ++ EL +++ + P +M VGLQGSGKTTT K A Y
Sbjct: 65 LESLTPGQQVIK-IVYEELTRLMGETRQDLNLTGQAPVSVMLVGLQGSGKTTTAAKLAVY 123
Query: 125 HQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENC 184
+K+G KP LV AD +R A DQLK+ ++ ++P + S +PV I + +++ C
Sbjct: 124 LKKQGRKPFLVPADVYRPAAIDQLKKLGSQVQVPVFASDPGMNPVDICRQARVAAQQQGC 183
Query: 185 DLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVG 244
+ +++DT+GR + AL EE+ + +A V+P ++ V D+ GQ A + AQ+F + + +G
Sbjct: 184 NTLLLDTAGRLHIDEALMEELVGIKQA-VSPSDILLVADAMTGQDAVNIAQSFNERLDIG 242
Query: 245 AVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGF 304
VI++KMDG A+GG ALS A T P+ F+G GE + E F S +LGMGD F
Sbjct: 243 GVILSKMDGDARGGAALSIKAVTGRPIKFVGVGEKTNALEAFHPDRMASSILGMGDVLSF 302
Query: 305 MDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPK 364
++K VV + +L +KL + FTL +Q I KMG IG + M+PG K
Sbjct: 303 IEKAQSVVDEKKAADLERKLRKNEFTLEDFRDQMTQIRKMGSIGDLMKMIPGMGKVKQMK 362
Query: 365 GREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLEEYK 424
E + ++ R +++SMT EE ++N SR RIA+GSG V+EV +L++Y
Sbjct: 363 DMEVDD-GQLSRIEAIINSMTAEE--RRRHAIINGSRRKRIAKGSGTSVQEVNRLLKDYT 419
Query: 425 RLAKIWSKM 433
++ K+ K+
Sbjct: 420 QVMKMVKKI 428
>gi|359416559|ref|ZP_09208866.1| signal recognition particle protein Srp54 [Candidatus Haloredivivus
sp. G17]
gi|358033083|gb|EHK01681.1| signal recognition particle protein Srp54 [Candidatus Haloredivivus
sp. G17]
Length = 428
Score = 251 bits (642), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 149/424 (35%), Positives = 248/424 (58%), Gaps = 19/424 (4%)
Query: 10 ISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGH 69
+ +IQ+ S+ + +DE+ + E + +I R L+ ADV LV ++ I++ L+ G
Sbjct: 5 VKESIQKFSSKSAVDEEAVEELVKDIQRDLIAADVDVGLVSDLSDEIREEA-LEGKKDGL 63
Query: 70 NKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKG 129
++ + + ++N++ ++L KP + +P I+ GL G+GKTTT K A Y++K+G
Sbjct: 64 TRKEHVLETVYNKMEELLGQ-KPEI---EIEPQKILLSGLYGAGKTTTAAKLADYYRKRG 119
Query: 130 WKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIV 189
K L+ ADT R A+DQLKQ A KA FYG +P ++ +G++ + ++IIV
Sbjct: 120 LKTGLIAADTDRPAAYDQLKQMAEKADSEFYGDPEAENPSQVVEKGLQEL---DAEVIIV 176
Query: 190 DTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVT 249
D++GR+ + L +E+ V E + PD VM + IGQ+A DQA+ F+ +V + VIVT
Sbjct: 177 DSAGRNSLDDELKKELSDV-EDVLRPDESYLVMPADIGQSAKDQAENFEDAVGITGVIVT 235
Query: 250 KMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIH 309
KMD AKGGGAL A + + + V FIGTGE + + EV+D +VS +LG + ++K+
Sbjct: 236 KMDSSAKGGGALIACSMSDAQVKFIGTGEQVTDLEVYDPVKYVSEMLGQPNLESLLEKVE 295
Query: 310 EVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKE 369
E ++ PE ++ EG FTL+ +Q +++ + G + + LP F + MP +
Sbjct: 296 E---LETDPE---EMLEGEFTLKEFRQQIESVSETGMMEDLMKQLP-FGGK-MPDNISQL 347
Query: 370 SQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLEEYKRLAKI 429
++ K + Y ++DSMT+EE+ ++P L+N SR RIA GSG EV E+++ Y++ +
Sbjct: 348 TEEKTQAYKYIIDSMTDEEI--NDPSLINKSRTERIASGSGTSNSEVRELIKHYRQTKNM 405
Query: 430 WSKM 433
KM
Sbjct: 406 MDKM 409
>gi|254169167|ref|ZP_04876003.1| SRP54-type protein, GTPase domain [Aciduliprofundum boonei T469]
gi|197621902|gb|EDY34481.1| SRP54-type protein, GTPase domain [Aciduliprofundum boonei T469]
Length = 366
Score = 251 bits (641), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 145/373 (38%), Positives = 219/373 (58%), Gaps = 8/373 (2%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L LG S+ I+++S A +DE ++ E + +I RALL+ADV+ L ++ N+++
Sbjct: 1 MLDSLGESLRNTIRKISKAGYVDESLIKEVVRDIQRALLRADVEVHLALKLSKNVERRAL 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
+ +G + R + + I+ EL +L K KP +M VGL G GKTTT K
Sbjct: 61 EEKPPSGMSHRDFLIKIIYEELVAILGKEKEVAL----KPQKLMLVGLYGQGKTTTAGKL 116
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKK 181
A Y KKG AL+ D R A++QLKQ + +P +G E D +IA E V+ K
Sbjct: 117 ARYFHKKGLSVALIACDVHRPAAYEQLKQIGEQLNVPVFGIPGEKDARKIAREAVKKMK- 175
Query: 182 ENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSV 241
+ + I DTSGRH E L EE++ + E + PD + V+D++IGQ A QA+AF +V
Sbjct: 176 -DYQVQIFDTSGRHALEDDLIEEIKDLKE-IIQPDEIFLVLDATIGQQAGKQAKAFHDAV 233
Query: 242 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 301
V VI+TKMDG AKGGGALSAVAAT +PV+FIGTGEH+++ E F+ F+SRLLGMGD
Sbjct: 234 GVTGVIITKMDGSAKGGGALSAVAATGAPVVFIGTGEHLEDLEHFNPTRFISRLLGMGDL 293
Query: 302 SGFMD-KIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
++ + ++ ++++++ G F L+ MYE ++ + K G + ++ LP F
Sbjct: 294 ETLLETAKELELKEEEAEKVMERMMSGKFNLKDMYEIWEQMAKPGLLQKILYSLPFFKMG 353
Query: 361 LMPKGREKESQAK 373
+ KG +ES+ K
Sbjct: 354 DIDKGMVEESEEK 366
>gi|339009345|ref|ZP_08641917.1| signal recognition particle protein [Brevibacillus laterosporus LMG
15441]
gi|338773823|gb|EGP33354.1| signal recognition particle protein [Brevibacillus laterosporus LMG
15441]
Length = 480
Score = 251 bits (641), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 145/438 (33%), Positives = 235/438 (53%), Gaps = 8/438 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L + A ++ IDE ++NE + E+ ALL+ADV FK+V++ IK+
Sbjct: 1 MAFESLASRLQGAFDKLRGRGKIDETIVNEAMREVRLALLEADVNFKVVKQFVARIKERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
D+ +++ + + EL +++ P+VIM VGLQG+GKTTT K
Sbjct: 61 VGQDVLKSLTPGQMVIKVVNEELTELMGGNVSKLAVSNRPPTVIMMVGLQGAGKTTTTGK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A QK+ KP LV D +R A QL+ + P + + PV IA + +E K
Sbjct: 121 LAKLLQKQNRKPMLVACDIYRPAAIKQLQVLGEQLSAPVFAMGDQVSPVEIATKAIEHAK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
+ + D +I+DT+GR + L EE++QV E PD ++ V+D+ GQ A + A++F
Sbjct: 181 ENHYDYVILDTAGRLHIDETLMEELQQVRE-VAKPDEILLVVDAMTGQDAVNVAESFNNQ 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
+ + VI+TK+DG +GG ALS A T P+ F GE +D E F SR+LGMGD
Sbjct: 240 LELTGVILTKLDGDTRGGAALSVKAVTGKPIKFAAMGEKLDALEPFHPDRMASRILGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
++K E V +D+ E+ +++ +G FT + + Q + ++GP+ + MLPG +
Sbjct: 300 VLSLIEKAQESVDVDKAKEMERQMRQGEFTFDMFLDSMQQMRQLGPLEDLLGMLPGMNKM 359
Query: 361 LMPKGRE--KESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVME 418
KG + K + +I R ++ SMT EE +NP +MN +R RIA GSG ++EV
Sbjct: 360 ---KGMKDLKVDEKQIARTEAIVKSMTKEE--RANPDIMNANRRKRIAAGSGTTIQEVNR 414
Query: 419 MLEEYKRLAKIWSKMKGL 436
+++++ + K+ + G+
Sbjct: 415 FIKQFEDMKKMMKQFTGM 432
>gi|184155710|ref|YP_001844050.1| signal recognition particle protein [Lactobacillus fermentum IFO
3956]
gi|183227054|dbj|BAG27570.1| signal recognition particle protein [Lactobacillus fermentum IFO
3956]
Length = 484
Score = 251 bits (641), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 145/436 (33%), Positives = 238/436 (54%), Gaps = 9/436 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L + +A++++ + E L E + EI ALL+ADV FK+V++ +++
Sbjct: 9 MAFEGLTERLQKAMEKLRRKPKVTEADLRETMREIRLALLEADVNFKVVKDFVKTVREKA 68
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ G N + I + + +EL +M+ P+VIM VGLQG+GKTTT K
Sbjct: 69 AGAEVLKGLNPAQQIVKIVNDELTEMMGETATPLNKSAHIPTVIMMVGLQGAGKTTTAGK 128
Query: 121 YAYYHQKK-GWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
A + +K+ +P + AD +R A QL+Q A +P + T+ DPV I +G+E
Sbjct: 129 LAKHLKKEENARPLFIAADVYRPAAITQLQQVAASIDVPVFEMGTDVDPVEIVRQGMEVA 188
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQ 239
K+++ D +I+DT+GR + + L EE+ ++ E PD ++ V+D+ GQ A + AQ F
Sbjct: 189 KEKHNDYVIIDTAGRLQIDEQLMEELAKIKE-LAKPDEILLVVDAMTGQNAVNTAQGFDD 247
Query: 240 SVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMG 299
+ + V++TK+DG +GG A+S A T P+ F+G GE MD +VF SR+LGMG
Sbjct: 248 QLDITGVVLTKLDGDTRGGAAMSIRAVTGKPIKFVGEGEKMDNLDVFHPDRMASRILGMG 307
Query: 300 DWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSS 359
D ++K E +Q + + K+ E +F +Q I KMGP+ + M+PG ++
Sbjct: 308 DMMTLIEKAQENFDQEQATQAMAKMKENSFDFNDFLDQMDQITKMGPLEDLLKMMPGMAN 367
Query: 360 E--LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVM 417
L + + A IK ++ SMT EE NP +MN SR R+A GSGR + EV
Sbjct: 368 NPALQNINLDPKQFAHIK---AIIYSMTPEE--RENPDMMNPSRRRRLAAGSGRPIVEVN 422
Query: 418 EMLEEYKRLAKIWSKM 433
M++++ ++ K+ ++
Sbjct: 423 RMIKQFNQMRKMMRQV 438
>gi|218782478|ref|YP_002433796.1| signal recognition particle protein [Desulfatibacillum alkenivorans
AK-01]
gi|218763862|gb|ACL06328.1| signal recognition particle protein [Desulfatibacillum alkenivorans
AK-01]
Length = 442
Score = 251 bits (641), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 157/429 (36%), Positives = 235/429 (54%), Gaps = 12/429 (2%)
Query: 23 IDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN----LDDLAAGHNKRRIIQQA 78
+ EK + + L E+ ALL+ADV +K+V+ + IK+ L+ L G +I+ +
Sbjct: 22 LSEKNIQDGLKEVRLALLEADVHYKVVKTLIAAIKERAVGQEVLESLTPGQQVVKIVNE- 80
Query: 79 IFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCAD 138
EL ++ G P+ IM VGLQGSGKTTT K A Y + +G KP LV AD
Sbjct: 81 ---ELTNLMGGANEEINLGGGHPASIMLVGLQGSGKTTTAGKLAVYLRGQGRKPYLVPAD 137
Query: 139 TFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQE 198
+R A +QL + + IP Y S T+S P +IA +E CD +I+DT+GR +
Sbjct: 138 VYRPAAIEQLTKIGKELSIPVYPSDTDSKPEKIAELARIKCAQEGCDTMILDTAGRLHID 197
Query: 199 AALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGG 258
L E+ ++ +AT P ++ V D+ GQ A + A+AF ++ VG VI+TKMDG A+GG
Sbjct: 198 DELMAELGRI-KATTPPSDILLVADAMTGQDAVNMAKAFNDAMDVGGVILTKMDGDARGG 256
Query: 259 GALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQP 318
ALS + T P+ FIGTGE + FE F SR+LGMGD ++K + V + +
Sbjct: 257 AALSIRSITGKPIKFIGTGEKSNAFEAFHPNRMASRILGMGDVMTLIEKAQDAVDVKKAA 316
Query: 319 ELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYM 378
EL +KL + FTL +Q + KMG + + SM+PG K + K S ++ +
Sbjct: 317 ELEKKLRKSQFTLEDFKDQMVQVRKMGSLEDIMSMIPGMGKSKHLK-QLKGSDKEMIKIE 375
Query: 379 TMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLKI 438
+++SMT EE N ++N SR RIA+GSG V +V ++L+ Y ++ K+ K+ +
Sbjct: 376 AIINSMTLEE--RRNHTIINGSRRKRIAKGSGATVTDVNQLLKNYTQVMKMMKKINKGGM 433
Query: 439 PKKGEMSAL 447
K G M L
Sbjct: 434 KKMGRMLGL 442
>gi|254169193|ref|ZP_04876028.1| SRP54-type protein, GTPase domain [Aciduliprofundum boonei T469]
gi|197621851|gb|EDY34431.1| SRP54-type protein, GTPase domain [Aciduliprofundum boonei T469]
Length = 348
Score = 250 bits (639), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 140/355 (39%), Positives = 211/355 (59%), Gaps = 8/355 (2%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L LG S+ I+++S A +DE ++ E + +I RALL+ADV+ L ++ N+++
Sbjct: 1 MLDSLGESLRNTIRKISKAGYVDESLIKEVVRDIQRALLRADVEVHLALKLSKNVERRAL 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKY 121
+ +G + R + + I+ EL +L K KP +M VGL G GKTTT K
Sbjct: 61 EEKPPSGMSHRDFLIKIIYEELVAILGKEKEVAL----KPQKLMLVGLYGQGKTTTAGKL 116
Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKK 181
A Y KKG AL+ D R A++QLKQ + +P +G E D +IA + V+ K
Sbjct: 117 ARYFHKKGLSVALIACDVHRPAAYEQLKQIGEQLNVPVFGIPGEKDARKIARDAVKKMK- 175
Query: 182 ENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSV 241
+ + I DTSGRH E L EE++ + E + PD + V+D++IGQ A QA+AF +V
Sbjct: 176 -DYQVQIFDTSGRHALEDDLIEEIKDLKE-IIQPDEIFLVLDATIGQQAGKQAKAFHDAV 233
Query: 242 SVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 301
V VI+TKMDG AKGGGALSAVAAT +PV+FIGTGEH+++ E F+ F+SRLLGMGD
Sbjct: 234 GVTGVIITKMDGSAKGGGALSAVAATGAPVVFIGTGEHLEDLEHFNPTRFISRLLGMGDL 293
Query: 302 SGFMDKIHEVVPMDQQPE-LLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLP 355
++ E+ + + E +++++ G F L+ MYE ++ + K G + ++ LP
Sbjct: 294 ETLLETAKELELKEVEAEKVMERMMSGKFNLKDMYEIWEQMAKPGLLQKILYSLP 348
>gi|421872835|ref|ZP_16304452.1| signal recognition particle protein [Brevibacillus laterosporus
GI-9]
gi|372458250|emb|CCF14001.1| signal recognition particle protein [Brevibacillus laterosporus
GI-9]
Length = 480
Score = 250 bits (639), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 144/438 (32%), Positives = 235/438 (53%), Gaps = 8/438 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L + A ++ IDE ++NE + E+ ALL+ADV FK+V++ +K+
Sbjct: 1 MAFESLASRLQGAFDKLRGRGKIDETIVNEAMREVRLALLEADVNFKVVKQFVARVKERA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
D+ +++ + + EL +++ P+VIM VGLQG+GKTTT K
Sbjct: 61 VGQDVLKSLTPGQMVIKVVNEELTELMGGNVSKLAVSNRPPTVIMMVGLQGAGKTTTTGK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A QK+ KP LV D +R A QL+ + P + + PV IA + +E K
Sbjct: 121 LAKLLQKQNRKPMLVACDIYRPAAIKQLQVLGEQLSAPVFAMGDQVSPVEIATKAIEHAK 180
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
+ + D +I+DT+GR + L EE++QV E PD ++ V+D+ GQ A + A++F
Sbjct: 181 ENHYDYVILDTAGRLHIDETLMEELQQVRE-VAKPDEILLVVDAMTGQDAVNVAESFNNQ 239
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
+ + VI+TK+DG +GG ALS A T P+ F GE +D E F SR+LGMGD
Sbjct: 240 LELTGVILTKLDGDTRGGAALSVKAVTGKPIKFAAMGEKLDALEPFHPDRMASRILGMGD 299
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
++K E V +D+ E+ +++ +G FT + + Q + ++GP+ + MLPG +
Sbjct: 300 VLSLIEKAQESVDVDKAKEMERQMRQGEFTFDMFLDSMQQMRQLGPLEDLLGMLPGMNKM 359
Query: 361 LMPKGRE--KESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVME 418
KG + K + +I R ++ SMT EE +NP +MN +R RIA GSG ++EV
Sbjct: 360 ---KGMKDLKVDEKQIARTEAIVKSMTKEE--RANPDIMNANRRKRIAAGSGTTIQEVNR 414
Query: 419 MLEEYKRLAKIWSKMKGL 436
+++++ + K+ + G+
Sbjct: 415 FIKQFEDMKKMMKQFTGM 432
>gi|423335535|ref|ZP_17313310.1| signal recognition particle protein [Lactobacillus reuteri ATCC
53608]
gi|337728765|emb|CCC03884.1| signal recognition particle protein [Lactobacillus reuteri ATCC
53608]
Length = 481
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 143/434 (32%), Positives = 235/434 (54%), Gaps = 5/434 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L + +A++++ + E L E + EI ALL+ADV FK+V++ +++
Sbjct: 1 MAFEGLTDRLQKAMEKLRRKPKVTEADLRETMREIRLALLEADVNFKVVKDFVKTVREKA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ G N + I + + +EL K++ P+VIM VGLQG+GKTTT K
Sbjct: 61 AGAEVLKGLNPAQQIVKIVNDELTKLMGEEAVPLNKAPHIPTVIMMVGLQGAGKTTTAGK 120
Query: 121 YAYYHQKKGW-KPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
A + + +P + AD +R A QL+Q A + +P + T+ DPV I EG+E
Sbjct: 121 LALRLKNENHARPMFIAADVYRPAAITQLQQVADQIDVPVFEKGTDVDPVEIVREGMEVA 180
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQ 239
KK + D +I+DT+GR + + L +E+ + E VNP+ ++ V+DS GQ A + AQ F
Sbjct: 181 KKNHNDYVIIDTAGRLQIDEQLMDELANIKE-LVNPNEILLVIDSMTGQNAVNTAQGFDD 239
Query: 240 SVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMG 299
+++ VI+TK+DG +GG A+S A T P+ F+G GE M++ +VF SR+LGMG
Sbjct: 240 KLNITGVILTKLDGDTRGGAAMSIRAVTGKPIKFVGEGEKMEDLDVFHPDRMASRILGMG 299
Query: 300 DWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSS 359
D ++K + +Q E + K+ E F Q + KMGP+ + M+PG ++
Sbjct: 300 DMMTLIEKAQKNFDEEQAQETMDKMRENTFDYNDFLAQMDQVTKMGPLENIIKMMPGMAN 359
Query: 360 ELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEM 419
K + + + ++ SMT EE NP LMN SR R+A G+GR + EV M
Sbjct: 360 NPALKNLNLDPK-QFAHIRAIVLSMTPEE--RENPDLMNPSRRRRLAAGAGRPIVEVNRM 416
Query: 420 LEEYKRLAKIWSKM 433
++++ ++ K+ ++
Sbjct: 417 IKQFNQMRKMMKQV 430
>gi|417000955|ref|ZP_11940949.1| signal recognition particle protein [Veillonella parvula
ACS-068-V-Sch12]
gi|333975829|gb|EGL76706.1| signal recognition particle protein [Veillonella parvula
ACS-068-V-Sch12]
Length = 450
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 148/444 (33%), Positives = 243/444 (54%), Gaps = 6/444 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L + A Q + I E +N L ++ ALL+ADV F + ++ +IK+
Sbjct: 1 MAFDSLSEKLQEAFQSLKGKGKITEDDVNLALRQVRTALLEADVNFMVAKDFVKSIKEKA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+++ N + + + + +EL +L + P++IM VGLQG+GKTTT K
Sbjct: 61 LGEEVFGSLNPAQTVIKIVNDELTALLGGTQSRIMISSKPPTIIMLVGLQGAGKTTTAGK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTE-SDPVRIAVEGVETF 179
A Y +K+G +P LV AD +R A QL+ + IP + T ++PV IA VE
Sbjct: 121 LAVYLRKQGKRPMLVAADVYRPAAITQLQVVGKQIDIPVFSDETPGANPVDIARRAVEQS 180
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQ 239
D++I+DT+GR + L +E+ + +A V P ++ V+DS IGQ A AQ F +
Sbjct: 181 THMLKDVVIIDTAGRLAIDGVLMDELSNI-KAAVRPHEILLVVDSMIGQDAVTTAQTFNE 239
Query: 240 SVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMG 299
+ V VI+TK+DG A+GG ALS A T P+ F G E MD F+VF SR+L +G
Sbjct: 240 KLGVDGVILTKLDGDARGGAALSIKAVTGLPIKFTGVSEKMDGFDVFYPDRMASRILDLG 299
Query: 300 DWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSS 359
D+ ++ + + ++ E+ +K+++ NFTL +Q + K+GP+ + MLPG
Sbjct: 300 DFKTLIENVQGAIDEEEAREMAKKMAKNNFTLDDFLKQMNQVRKLGPLQNIIGMLPGM-G 358
Query: 360 ELMPKGREKESQAK-IKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVME 418
++ + ++ + +K ++R ++ SMT E NP ++N SR RIA GSG QV++V
Sbjct: 359 QIKDQLKDLDLNSKEVRRIEAIITSMTAAE--RENPSILNGSRRKRIALGSGTQVQDVNR 416
Query: 419 MLEEYKRLAKIWSKMKGLKIPKKG 442
+L++++ K+ +M+GL+ K G
Sbjct: 417 LLKQFEEARKMMKRMQGLRGGKGG 440
>gi|331701481|ref|YP_004398440.1| signal recognition particle protein [Lactobacillus buchneri NRRL
B-30929]
gi|406027042|ref|YP_006725874.1| signal recognition particle protein [Lactobacillus buchneri CD034]
gi|329128824|gb|AEB73377.1| signal recognition particle protein [Lactobacillus buchneri NRRL
B-30929]
gi|405125531|gb|AFS00292.1| signal recognition particle protein [Lactobacillus buchneri CD034]
Length = 479
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 145/442 (32%), Positives = 243/442 (54%), Gaps = 13/442 (2%)
Query: 28 LNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDLAAGHNKRRIIQQAIFNELCKML 87
L + EI ALL+ADV F++VR+ +++ N + G N + I + + EL K +
Sbjct: 28 LRATMREIRLALLEADVNFQVVRDFVKTVEERANGAKVLEGLNPSQQIVKIVDEELTKTM 87
Query: 88 DPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAY-YHQKKGWKPALVCADTFRAGAFD 146
+ P++IM GLQG+GKTTT K A ++ +P L+ D +R A D
Sbjct: 88 GEEAVPLNKAEKIPTIIMMSGLQGAGKTTTAGKLALKLKNEQNARPLLIADDIYRPAAID 147
Query: 147 QLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMR 206
QL+ + +P + T+ DPV IA GVE K+++ D +I+DT+GR + + L +E+
Sbjct: 148 QLQTVGQQIDVPVFSLGTDVDPVEIAKRGVEQAKQDHNDYVIIDTAGRLQIDEKLMDELS 207
Query: 207 QVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAA 266
+ +A V P+ ++ V+D+ GQ A A+ F +++ V V++TK+DG +GG ALS A
Sbjct: 208 HIKDA-VEPNEILLVIDAMTGQNAVATAEGFNKTLDVTGVVLTKLDGDTRGGAALSIRAV 266
Query: 267 TKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSE 326
T+ P+ F+G GE M + +VF SR+LGMGD ++K + Q EL +K+ E
Sbjct: 267 TQKPIKFVGQGEKMSDLDVFYPDRMASRILGMGDMLSLIEKTQKEYDEKQAQELSEKIQE 326
Query: 327 GNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYM-TMMDSMT 385
F +Q I KMGP+ ++ M+PG ++ P+ + K ++ ++ SMT
Sbjct: 327 NTFDFNDFVDQLNQIQKMGPLDEIMKMIPGMANN--PQLKNANMDPKDMDHLKAIVYSMT 384
Query: 386 NEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLKIPKKGEMS 445
++E ++P ++N SR RIARGSGR ++EV M++++ ++ + +K+ KG MS
Sbjct: 385 DQE--RTDPDVLNPSRRRRIARGSGRPIQEVNRMIKQFGQMKTMMNKV------SKGNMS 436
Query: 446 ALSRNMNAQHMSKVLPQGMLKQ 467
+ MN+ M + + +KQ
Sbjct: 437 GMENMMNSTGMGGKMSKLAMKQ 458
>gi|297544730|ref|YP_003677032.1| signal recognition particle protein [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
gi|296842505|gb|ADH61021.1| signal recognition particle protein [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
Length = 446
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 147/427 (34%), Positives = 233/427 (54%), Gaps = 14/427 (3%)
Query: 23 IDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV----NLDDLAAGHNKRRIIQQA 78
+ EK + E + E+ ALL+ADV FK+V++ ++ + ++ L G +I+
Sbjct: 23 LTEKDIKEAMREVKVALLEADVNFKVVKDFINSVTEKALGQEVMESLTPGQQVIKIVN-- 80
Query: 79 IFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCAD 138
+EL ++ + P+VIM VGLQGSGKTT C K A +K+G P LV D
Sbjct: 81 --DELIALMGSTQSRLNIGNKVPAVIMMVGLQGSGKTTACGKLANLLKKQGKNPLLVACD 138
Query: 139 TFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQE 198
R A QL+ +P + +++PV IA ++ + N D+II+DT+GR +
Sbjct: 139 VVRPAAIKQLQVVGANVNVPVFTMGDKANPVDIAKASIDYARSHNSDVIIIDTAGRLHID 198
Query: 199 AALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGG 258
L EE+ + A V PD ++ V+D+ GQ A + A +F + + + VI+TK+DG +GG
Sbjct: 199 EELMEELVNIKRA-VQPDEILLVVDAMTGQDAVNVASSFNERLDITGVILTKLDGDTRGG 257
Query: 259 GALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQP 318
ALS A T+ P+ ++GTGE + + E F SR+LGMGD ++K + +
Sbjct: 258 AALSIKAVTQKPIKYVGTGEKLTDLEPFYPNRMASRILGMGDVLTLIEKAQAAIDEKKAQ 317
Query: 319 ELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYM 378
EL QKL FTL EQ Q++ MGP+ Q+ SM+PG + ++ S+ +KR
Sbjct: 318 ELGQKLLTKQFTLEDFLEQLQSLKNMGPLDQLLSMIPGMNKNMLK--NVDISEKDLKRIE 375
Query: 379 TMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGL-K 437
++ SMT EE NP ++N SR RIA+GSG +++V +L++++ K+ K + K
Sbjct: 376 AIIQSMTKEE--RQNPSIINGSRKKRIAKGSGTTIQQVNSLLKQFEETKKMMKKFADIDK 433
Query: 438 IPKKGEM 444
KKG+M
Sbjct: 434 DLKKGKM 440
>gi|312134783|ref|YP_004002121.1| signal recognition particle protein [Caldicellulosiruptor
owensensis OL]
gi|311774834|gb|ADQ04321.1| signal recognition particle protein [Caldicellulosiruptor
owensensis OL]
Length = 443
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 148/425 (34%), Positives = 236/425 (55%), Gaps = 11/425 (2%)
Query: 23 IDEKVLNECLNEITRALLQADVQFKLVREMQTNI-KKIVNLDDLAAGHNKRRIIQQAIFN 81
+ EK + E + E+ ALL+ADV +K+V++ N+ +K V + L + +++I+ +++
Sbjct: 22 LTEKDIKEAMKEVKLALLEADVNYKVVKDFINNVTQKAVGEEVLESLTPAQQVIK-IVYD 80
Query: 82 ELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFR 141
E+ +L T S+ M VGLQGSGKTTT K A +K+G P LV D +R
Sbjct: 81 EMVNLLGGSDAKLTFSPSGFSIYMMVGLQGSGKTTTAGKLAGLLKKQGKNPLLVACDIYR 140
Query: 142 AGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAAL 201
A QL+ A K + Y YT D V+IA +G+E K D++I+DT+GR L
Sbjct: 141 PAAIKQLEVVAQKVGVKCYADYTSQDAVKIAKDGIEFAKSNRSDVVIIDTAGRLHINQEL 200
Query: 202 FEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGAL 261
+E++ + A V P ++ V+D+ GQ A + A+AF + + +I+TK+DG +GG AL
Sbjct: 201 MDELKNIKNA-VKPTEILLVVDAMTGQDAVNVAEAFNAQLGIDGIIMTKLDGDTRGGAAL 259
Query: 262 SAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELL 321
S A T P+ F G GE M++ E F SR+LGMGD ++K E + + EL
Sbjct: 260 SVKAITGKPIKFAGVGEKMEDLEPFYPDRMASRILGMGDILTLIEKAQEAIDQKKAEELE 319
Query: 322 QKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPG--FSSELMPKGREKESQAKIKRYMT 379
+KL FTL +Q + I KMGP+ Q+ SM+PG ++ EKE +K+
Sbjct: 320 KKLRSMQFTLEDFLDQLKQIKKMGPLSQIISMIPGIKLKGDVDFDAGEKE----LKKIEA 375
Query: 380 MMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGLKIP 439
+++SMT EE +P ++N SR RIA GSG V++V +L++++ + ++ +
Sbjct: 376 IINSMTREE--RQDPSIINSSRKRRIAMGSGTTVQDVNRLLKQFEDMKRMMKQFSNPNFA 433
Query: 440 KKGEM 444
KKG++
Sbjct: 434 KKGKI 438
>gi|221633791|ref|YP_002523017.1| signal recognition particle protein [Thermomicrobium roseum DSM
5159]
gi|221156000|gb|ACM05127.1| signal recognition particle protein [Thermomicrobium roseum DSM
5159]
Length = 488
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 138/428 (32%), Positives = 242/428 (56%), Gaps = 4/428 (0%)
Query: 6 LGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVNLDDL 65
L +++ Q++ + E+ ++E L E+ RALL+ADV + +VR+ +++ +++
Sbjct: 5 LTDRLTQVFQRIGRKGRLTEEDVDEALREVRRALLEADVHYTVVRDFIAAVRERAIGEEV 64
Query: 66 AAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYH 125
+ + + EL ++L + P++IM VGLQGSGKTT K Y+
Sbjct: 65 LRSLTPAQQVIAIVHQELVRVLGSERVPLLWASQPPTIIMLVGLQGSGKTTQVAKLGYHL 124
Query: 126 QKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCD 185
+K+G +P LV AD +R A +QL+ + +P Y T+ DPV V+ + + +
Sbjct: 125 RKEGRRPLLVAADIYRPAAVEQLRTLGKQHDLPVYDEGTKVDPVETVKHAVKVARDQGYN 184
Query: 186 LIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGA 245
+I+DT+GR + + + +E+ +++EA V P ++ V D+ GQ A + A+ F + +S+
Sbjct: 185 PVIIDTAGRLQIDEPMMQELERMAEA-VRPTEILLVADAMTGQEAVNVAKEFHRRLSLTG 243
Query: 246 VIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFM 305
+I+TK+DG A+GG ALS A P+ FIGTGE +D E F +R+LGMGD +
Sbjct: 244 LILTKLDGDARGGAALSIRAVVGVPIKFIGTGERVDALEPFYPDRLATRILGMGDVLSLI 303
Query: 306 DKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKG 365
+K + + ++ +L +KL G F L Q Q + KMGP+ Q+ M+PG +L+ +
Sbjct: 304 EKAQQQISQEEGKKLQEKLLAGTFDLEDFLRQLQQVKKMGPLTQLLEMIPGM-GQLLRQQ 362
Query: 366 REKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLEEYKR 425
+ + S + KR ++ SMT EE NP ++N SR RIA+GSG + EV ++L ++K+
Sbjct: 363 QVQISDDEYKRIEAIILSMTPEE--RRNPDIINYSRRRRIAQGSGTTIAEVSQLLTQFKQ 420
Query: 426 LAKIWSKM 433
+ ++ +++
Sbjct: 421 MQRMMAEL 428
>gi|227515698|ref|ZP_03945747.1| Sec family type I general secretory pathway protein signal
recognition particle protein [Lactobacillus fermentum
ATCC 14931]
gi|227085946|gb|EEI21258.1| Sec family type I general secretory pathway protein signal
recognition particle protein [Lactobacillus fermentum
ATCC 14931]
Length = 476
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 145/436 (33%), Positives = 237/436 (54%), Gaps = 9/436 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L + +A++++ + E L E + EI ALL+ADV FK+V++ +++
Sbjct: 1 MAFEGLTERLQKAMEKLRRKPKVTEADLRETMREIRLALLEADVNFKVVKDFVKTVREKA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ G N + I + + +EL +M+ P+VIM VGLQG+GKTTT K
Sbjct: 61 AGAEVLKGLNPAQQIVKIVNDELTEMMGETATPLNKSAHIPTVIMMVGLQGAGKTTTAGK 120
Query: 121 YAYYHQKK-GWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
A +K+ +P + AD +R A QL+Q A +P + T+ DPV I +G+E
Sbjct: 121 LAKRLKKEENARPLFIAADVYRPAAITQLQQVAASIDVPVFEMGTDVDPVEIVRQGMEVA 180
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQ 239
K+++ D +I+DT+GR + + L EE+ ++ E PD ++ V+D+ GQ A + AQ F
Sbjct: 181 KEKHNDYVIIDTAGRLQIDEQLMEELAKIKE-LAKPDEILLVVDAMTGQNAVNTAQGFDD 239
Query: 240 SVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMG 299
+ + V++TK+DG +GG A+S A T P+ F+G GE MD +VF SR+LGMG
Sbjct: 240 QLDITGVVLTKLDGDTRGGAAMSIRAVTGKPIKFVGEGEKMDNLDVFHPDRMASRILGMG 299
Query: 300 DWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSS 359
D ++K E +Q + + K+ E +F +Q I KMGP+ + M+PG ++
Sbjct: 300 DMMTLIEKAQENFDQEQATQAMAKMKENSFDFNDFLDQMDQITKMGPLEDLLKMMPGMAN 359
Query: 360 E--LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVM 417
L + + A IK ++ SMT EE NP +MN SR R+A GSGR + EV
Sbjct: 360 NPALQNINLDPKQFAHIK---AIIYSMTPEE--RENPDMMNPSRRRRLAAGSGRPIVEVN 414
Query: 418 EMLEEYKRLAKIWSKM 433
M++++ ++ K+ ++
Sbjct: 415 RMIKQFNQMRKMMRQV 430
>gi|167040350|ref|YP_001663335.1| signal recognition particle protein [Thermoanaerobacter sp. X514]
gi|256750717|ref|ZP_05491602.1| signal recognition particle protein [Thermoanaerobacter ethanolicus
CCSD1]
gi|300914434|ref|ZP_07131750.1| signal recognition particle protein [Thermoanaerobacter sp. X561]
gi|307724330|ref|YP_003904081.1| signal recognition particle protein [Thermoanaerobacter sp. X513]
gi|166854590|gb|ABY92999.1| signal recognition particle protein [Thermoanaerobacter sp. X514]
gi|256750300|gb|EEU63319.1| signal recognition particle protein [Thermoanaerobacter ethanolicus
CCSD1]
gi|300889369|gb|EFK84515.1| signal recognition particle protein [Thermoanaerobacter sp. X561]
gi|307581391|gb|ADN54790.1| signal recognition particle protein [Thermoanaerobacter sp. X513]
Length = 446
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 149/427 (34%), Positives = 232/427 (54%), Gaps = 14/427 (3%)
Query: 23 IDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV----NLDDLAAGHNKRRIIQQA 78
+ EK + E + E+ ALL+ADV FK+V++ ++ + ++ L G +I+
Sbjct: 23 LTEKDIKEAMREVKVALLEADVNFKVVKDFINSVTEKALGQEVMESLTPGQQVIKIVN-- 80
Query: 79 IFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCAD 138
+EL ++ + P+VIM VGLQGSGKTT C K A +K+G P LV D
Sbjct: 81 --DELIALMGSTQSRLNIGNKVPAVIMMVGLQGSGKTTACGKLANLLKKQGKNPLLVACD 138
Query: 139 TFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQE 198
R A QL+ +P + + +PV IA ++ K N D+II+DT+GR +
Sbjct: 139 VVRPAAIKQLQVVGANVNVPVFTMGDKVNPVDIAKASIDYAKSHNSDVIIIDTAGRLHVD 198
Query: 199 AALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGG 258
L EE+ + +A V PD ++ V+D+ GQ A + A +F + + VI+TK+DG +GG
Sbjct: 199 EELMEELVNIKKA-VQPDEILLVVDAMTGQDAVNVASSFNARLDITGVILTKLDGDTRGG 257
Query: 259 GALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQP 318
ALS A T+ P+ +IGTGE + + E F SR+LGMGD ++K + +
Sbjct: 258 AALSIKAVTQKPIKYIGTGEKLTDLEPFYPDRMASRILGMGDVLTLIEKAQAAIDEKKAQ 317
Query: 319 ELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYM 378
EL QKL FTL EQ Q++ MGP+ Q+ SM+PG + ++ S+ +KR
Sbjct: 318 ELGQKLLTKQFTLEDFLEQLQSLKNMGPLDQLLSMIPGMNKNMLK--NVDFSEKDLKRIE 375
Query: 379 TMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGL-K 437
++ SMT EE NP ++N SR RIA+GSG +++V +L++++ K+ K + K
Sbjct: 376 AIIQSMTKEE--RQNPSIINGSRKKRIAKGSGTTIQQVNSLLKQFEETKKMMKKFADIDK 433
Query: 438 IPKKGEM 444
KKG+M
Sbjct: 434 DLKKGKM 440
>gi|329764770|ref|ZP_08256364.1| GTP-binding signal recognition particle [Candidatus Nitrosoarchaeum
limnia SFB1]
gi|329138734|gb|EGG42976.1| GTP-binding signal recognition particle [Candidatus Nitrosoarchaeum
limnia SFB1]
Length = 441
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 153/435 (35%), Positives = 257/435 (59%), Gaps = 8/435 (1%)
Query: 2 VLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIVN 61
+L L ++ AI+++ ++ IDE+++ E ++ RALLQ+DV +LV E+ ++
Sbjct: 1 MLDNLRNNLRDAIKKIVKSSGIDEELIKELSKDVQRALLQSDVNVRLVLEITKQLEARSL 60
Query: 62 LDDLAAGHNKRRIIQQAIFNELCKMLDPGKPS-FTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+ G +++ I + +++EL K+L GK + F K K + I+ +G+QGSGKTT K
Sbjct: 61 NETPPPGLSRKDHIVKILYDELAKLL--GKETDFDFKPNKQNKIIMLGIQGSGKTTVTAK 118
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFK 180
A + K+G+ ++ ADT+R GA QLK K+ + YG D I G++ ++
Sbjct: 119 LAKFLTKQGYSVGVIGADTYRPGALVQLKTMCEKSNVEVYGEPNNKDSPDIVKNGLKHYE 178
Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQS 240
D+II+DT+GRHK+E L EM Q+++ + NPDL I V+D +IGQ F+QA+AF ++
Sbjct: 179 NLPLDIIIIDTAGRHKEEKDLLSEMEQINKVS-NPDLAILVIDGTIGQQCFNQAEAFHKT 237
Query: 241 VSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
+ VG +I+TK+D AKGGGA++A AAT + ++++GTGE +D+ E F FV RLLGMGD
Sbjct: 238 IPVGGIIITKLDSSAKGGGAIAASAATGAQIMYVGTGERIDDLEKFSPTRFVGRLLGMGD 297
Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSE 360
+D + + + + L+++S G + + Q + + K+G + +PG S
Sbjct: 298 IQAVLD-LAKRLENEGDDVRLKRISSGKMNMDDFFYQLEEVTKVGSLKGFLDNMPGLSG- 355
Query: 361 LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEML 420
++ + + + ++ ++ ++ SMT EE ++P L+N SRI RI+RGSG EV E+L
Sbjct: 356 MVKDDQLDQMEGRVSKWRFIIQSMTKEE--KADPDLLNSSRIKRISRGSGWPEHEVKELL 413
Query: 421 EEYKRLAKIWSKMKG 435
+ YK + KG
Sbjct: 414 KNYKNSKSMMKASKG 428
>gi|269797639|ref|YP_003311539.1| signal recognition particle protein [Veillonella parvula DSM 2008]
gi|269094268|gb|ACZ24259.1| signal recognition particle protein [Veillonella parvula DSM 2008]
Length = 450
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 148/444 (33%), Positives = 243/444 (54%), Gaps = 6/444 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L + A Q + I E +N L ++ ALL+ADV F + ++ +IK+
Sbjct: 1 MAFDSLSEKLQEAFQSLKGKGKITEDDVNLALRQVRTALLEADVNFMVAKDFVKSIKEKA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+++ N + + + + +EL +L + P++IM VGLQG+GKTTT K
Sbjct: 61 LGEEVFGSLNPAQTVIKIVNDELTALLGGTQSRIMISSKPPTIIMLVGLQGAGKTTTAGK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTE-SDPVRIAVEGVETF 179
A Y +K+G +P LV AD +R A QL+ + IP + T ++PV IA VE
Sbjct: 121 LAVYLRKQGKRPMLVAADVYRPAAITQLQVVGKQIDIPVFSDETPGANPVDIARRAVEQS 180
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQ 239
D++I+DT+GR + L +E+ + +A V P ++ V+DS IGQ A AQ F +
Sbjct: 181 THMLKDVVIIDTAGRLAIDEVLMDELSNI-KAAVRPHEILLVVDSMIGQDAVTTAQTFNE 239
Query: 240 SVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMG 299
+ V VI+TK+DG A+GG ALS A T P+ F G E MD F+VF SR+L +G
Sbjct: 240 KLGVDGVILTKLDGDARGGAALSIKAVTGLPIKFTGVSEKMDGFDVFYPDRMASRILDLG 299
Query: 300 DWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSS 359
D+ ++ + + ++ E+ +K+++ NFTL +Q + K+GP+ + MLPG
Sbjct: 300 DFKTLIENVQGAIDEEEAREMAKKMAKNNFTLDDFLKQMNQVRKLGPLQNIIGMLPGM-G 358
Query: 360 ELMPKGREKESQAK-IKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVME 418
++ + ++ + +K ++R ++ SMT E NP ++N SR RIA GSG QV++V
Sbjct: 359 QIKDQLKDLDLNSKEVRRIEAIITSMTAAE--RENPSILNGSRRKRIALGSGTQVQDVNR 416
Query: 419 MLEEYKRLAKIWSKMKGLKIPKKG 442
+L++++ K+ +M+GL+ K G
Sbjct: 417 LLKQFEEARKMMKRMQGLRGGKGG 440
>gi|260663573|ref|ZP_05864463.1| signal recognition particle protein [Lactobacillus fermentum
28-3-CHN]
gi|260552114|gb|EEX25167.1| signal recognition particle protein [Lactobacillus fermentum
28-3-CHN]
Length = 484
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 145/436 (33%), Positives = 237/436 (54%), Gaps = 9/436 (2%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L + +A++++ + E L E + EI ALL+ADV FK+V++ +++
Sbjct: 9 MAFEGLTERLQKAMEKLRRKPKVTEADLRETMREIRLALLEADVNFKVVKDFVKTVREKA 68
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
++ G N + I + + +EL +M+ P+VIM VGLQG+GKTTT K
Sbjct: 69 AGAEVLKGLNPAQQIVKIVNDELTEMMGETATPLNKSAHIPTVIMMVGLQGAGKTTTAGK 128
Query: 121 YAYYHQKK-GWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETF 179
A +K+ +P + AD +R A QL+Q A +P + T+ DPV I +G+E
Sbjct: 129 LAKRLKKEENARPLFIAADVYRPAAITQLQQVAASIDVPVFEMGTDVDPVEIVRQGMEVA 188
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQ 239
K+++ D +I+DT+GR + + L EE+ ++ E PD ++ V+D+ GQ A + AQ F
Sbjct: 189 KEKHNDYVIIDTAGRLQIDEQLMEELAKIKE-LAKPDEILLVVDAMTGQNAVNTAQGFDD 247
Query: 240 SVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMG 299
+ + V++TK+DG +GG A+S A T P+ F+G GE MD +VF SR+LGMG
Sbjct: 248 QLDITGVVLTKLDGDTRGGAAMSIRAVTGKPIKFVGEGEKMDNLDVFHPDRMASRILGMG 307
Query: 300 DWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSS 359
D ++K E +Q + + K+ E +F +Q I KMGP+ + M+PG ++
Sbjct: 308 DMMTLIEKAQENFDQEQATQAMAKMKENSFDFNDFLDQMDQITKMGPLEDLLKMMPGMAN 367
Query: 360 E--LMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVM 417
L + + A IK ++ SMT EE NP +MN SR R+A GSGR + EV
Sbjct: 368 NPALQNINLDPKQFAHIK---AIIYSMTPEE--RENPDMMNPSRRRRLAAGSGRPIVEVN 422
Query: 418 EMLEEYKRLAKIWSKM 433
M++++ ++ K+ ++
Sbjct: 423 RMIKQFNQMRKMMRQV 438
>gi|289578454|ref|YP_003477081.1| signal recognition particle protein [Thermoanaerobacter italicus
Ab9]
gi|289528167|gb|ADD02519.1| signal recognition particle protein [Thermoanaerobacter italicus
Ab9]
Length = 446
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 146/427 (34%), Positives = 233/427 (54%), Gaps = 14/427 (3%)
Query: 23 IDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV----NLDDLAAGHNKRRIIQQA 78
+ EK + E + E+ ALL+ADV FK+V++ ++ + ++ L G +I+
Sbjct: 23 LTEKDIKEAMREVKVALLEADVNFKVVKDFINSVTEKALGQEVMESLTPGQQVIKIVN-- 80
Query: 79 IFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCAD 138
+EL ++ + P+VIM VGLQGSGKTT C K A +K+G P LV D
Sbjct: 81 --DELIALMGSTQSRLNIGNKVPAVIMMVGLQGSGKTTACGKLANLLKKQGKNPLLVACD 138
Query: 139 TFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQE 198
R A QL+ +P + +++PV IA ++ + N D+II+DT+GR +
Sbjct: 139 VVRPAAIKQLQVVGANVNVPVFTMGDKANPVDIAKASIDYARSHNSDVIIIDTAGRLHID 198
Query: 199 AALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGG 258
L EE+ + A V PD ++ V+D+ GQ A + A +F + + + V++TK+DG +GG
Sbjct: 199 EELMEELVNIKRA-VQPDEILLVVDAMTGQDAVNVASSFNERLDITGVVLTKLDGDTRGG 257
Query: 259 GALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQP 318
ALS A T+ P+ ++GTGE + + E F SR+LGMGD ++K + +
Sbjct: 258 AALSIKAVTQKPIKYVGTGEKLTDLEPFYPNRMASRILGMGDVLTLIEKAQAAIDEKKAQ 317
Query: 319 ELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSSELMPKGREKESQAKIKRYM 378
EL QKL FTL EQ Q++ MGP+ Q+ SM+PG + ++ S+ +KR
Sbjct: 318 ELGQKLLTKQFTLEDFLEQLQSLKNMGPLDQLLSMIPGMNKNMLK--NVDISEKDLKRIE 375
Query: 379 TMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGL-K 437
++ SMT EE NP ++N SR RIA+GSG +++V +L++++ K+ K + K
Sbjct: 376 AIIQSMTKEE--RQNPSIINGSRKKRIAKGSGTTIQQVNSLLKQFEETKKMMKKFADIDK 433
Query: 438 IPKKGEM 444
KKG+M
Sbjct: 434 DLKKGKM 440
>gi|282850086|ref|ZP_06259468.1| signal recognition particle protein [Veillonella parvula ATCC
17745]
gi|294795144|ref|ZP_06760278.1| signal recognition particle protein [Veillonella sp. 3_1_44]
gi|282580275|gb|EFB85676.1| signal recognition particle protein [Veillonella parvula ATCC
17745]
gi|294453936|gb|EFG22311.1| signal recognition particle protein [Veillonella sp. 3_1_44]
Length = 450
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 148/444 (33%), Positives = 243/444 (54%), Gaps = 6/444 (1%)
Query: 1 MVLAQLGGSISRAIQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVREMQTNIKKIV 60
M L + A Q + I E +N L ++ ALL+ADV F + ++ +IK+
Sbjct: 1 MAFDSLSEKLQEAFQSLKGKGKITEDDVNLALRQVRTALLEADVNFMVAKDFVKSIKEKA 60
Query: 61 NLDDLAAGHNKRRIIQQAIFNELCKMLDPGKPSFTPKKGKPSVIMFVGLQGSGKTTTCTK 120
+++ N + + + + +EL +L + P++IM VGLQG+GKTTT K
Sbjct: 61 LGEEVFGSLNPAQTVIKIVNDELTALLGGTQSRIMISSKPPTIIMLVGLQGAGKTTTAGK 120
Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTE-SDPVRIAVEGVETF 179
A Y +K+G +P LV AD +R A QL+ + IP + T ++PV IA VE
Sbjct: 121 LAVYLRKQGKRPMLVAADVYRPAAITQLQVVGKQIDIPVFSDETPGANPVDIARRAVEQS 180
Query: 180 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATVNPDLVIFVMDSSIGQAAFDQAQAFKQ 239
D++I+DT+GR + L +E+ + +A V P ++ V+DS IGQ A AQ F +
Sbjct: 181 THMLKDVVIIDTAGRLAIDEVLMDELSNI-KAAVRPHEILLVVDSMIGQDAVTTAQTFNE 239
Query: 240 SVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMG 299
+ V VI+TK+DG A+GG ALS A T P+ F G E MD F+VF SR+L +G
Sbjct: 240 KLGVDGVILTKLDGDARGGAALSIKAVTGLPIKFTGVSEKMDGFDVFYPDRMASRILDLG 299
Query: 300 DWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQVFSMLPGFSS 359
D+ ++ + + ++ E+ +K+++ NFTL +Q + K+GP+ + MLPG
Sbjct: 300 DFKTLIENVQGAIDEEEAREMAKKMAKNNFTLDDFLKQMNQVRKLGPLQNIIGMLPGM-G 358
Query: 360 ELMPKGREKESQAK-IKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSGRQVREVME 418
++ + ++ + +K ++R ++ SMT E NP ++N SR RIA GSG QV++V
Sbjct: 359 QVKDQLKDLDLNSKEVRRIEAIITSMTAAE--RENPSILNGSRRKRIALGSGTQVQDVNR 416
Query: 419 MLEEYKRLAKIWSKMKGLKIPKKG 442
+L++++ K+ +M+GL+ K G
Sbjct: 417 LLKQFEEARKMMKRMQGLRGGKGG 440
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.133 0.377
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,145,901,787
Number of Sequences: 23463169
Number of extensions: 290533701
Number of successful extensions: 972266
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 9718
Number of HSP's successfully gapped in prelim test: 1342
Number of HSP's that attempted gapping in prelim test: 933062
Number of HSP's gapped (non-prelim): 13309
length of query: 495
length of database: 8,064,228,071
effective HSP length: 147
effective length of query: 348
effective length of database: 8,910,109,524
effective search space: 3100718114352
effective search space used: 3100718114352
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 79 (35.0 bits)