BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 011011
(495 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224129204|ref|XP_002328916.1| predicted protein [Populus trichocarpa]
gi|222839346|gb|EEE77683.1| predicted protein [Populus trichocarpa]
Length = 706
Score = 764 bits (1973), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/488 (75%), Positives = 423/488 (86%)
Query: 2 RFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDI 61
RF+ILLWG+KS +A + +E IP+FSY EIIDLG+ES KAFSDS+DAR+HYKYETI SDDI
Sbjct: 191 RFVILLWGEKSHLAINRMEGIPIFSYKEIIDLGQESCKAFSDSDDARQHYKYETISSDDI 250
Query: 62 ATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFI 121
AT VYTSGTTGNPKGVMLTHKNLLHQI +L+D+VPA+ D+FLSMLPPWH YERA YFI
Sbjct: 251 ATLVYTSGTTGNPKGVMLTHKNLLHQINNLWDVVPAQPADRFLSMLPPWHAYERAAEYFI 310
Query: 122 FSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALI 181
F+ G E +YT VRNLK DLQ+YQPHY+I+VPLV+ETLYSGIQKQ+ TSSA R+++A I
Sbjct: 311 FTHGTEQVYTTVRNLKVDLQQYQPHYLITVPLVFETLYSGIQKQLSTSSALRKILAFMFI 370
Query: 182 RISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQ 241
+IS Y KRIYEG L R++K+P Y V+++DWLWARII AIL P+H+LA+KLVY KI
Sbjct: 371 KISLTYMEMKRIYEGTYLVRSRKEPPYFVSMLDWLWARIIAAILLPVHMLAKKLVYSKIH 430
Query: 242 SAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHP 301
SAIGISKAGVSGGGSLP H+D F+EAIGV VQ GYG+TESSPV AARRP+ NVLGS+G P
Sbjct: 431 SAIGISKAGVSGGGSLPSHVDKFFEAIGVVVQNGYGMTESSPVTAARRPSNNVLGSIGLP 490
Query: 302 INHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGW 361
I HTE KIVDAET E LP GSKGIVKVRG QVM+GY+KNP ATKQA+DEDGWLN+GDIGW
Sbjct: 491 IRHTEFKIVDAETGEALPHGSKGIVKVRGPQVMKGYYKNPLATKQAVDEDGWLNSGDIGW 550
Query: 362 IAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQ 421
IAP+HSRGRSR CGGV+VLEGRAKDTIVL TGENVEPLELEEAA+RSSLI+QIVVIGQDQ
Sbjct: 551 IAPYHSRGRSRHCGGVIVLEGRAKDTIVLLTGENVEPLELEEAAMRSSLIQQIVVIGQDQ 610
Query: 422 RRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSKCSFQIGPIHV 481
RR GAI+VP+K+EVL AAK+ SIV DA+ELSK++ SLL ELRKWTS CSFQIGPI V
Sbjct: 611 RRLGAIVVPNKDEVLEAAKKWSIVDPDATELSKKQITSLLNEELRKWTSGCSFQIGPILV 670
Query: 482 VDEPFTVN 489
+DEPFT++
Sbjct: 671 IDEPFTID 678
>gi|296089272|emb|CBI39044.3| unnamed protein product [Vitis vinifera]
Length = 730
Score = 752 bits (1941), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/489 (73%), Positives = 417/489 (85%)
Query: 1 MRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDD 60
+RF++LLWG+KS + ++++ +PVF+Y EIIDLGRE R F DS+ ARK+Y YE I S+D
Sbjct: 214 IRFVVLLWGEKSCLPSEVMDRVPVFNYKEIIDLGRECRSVFLDSHYARKNYIYEAISSND 273
Query: 61 IATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF 120
IAT VYTSGTTGNPKGVMLTH+NLLHQI++L+DIVPAE GD+FLSMLP WH YERA YF
Sbjct: 274 IATLVYTSGTTGNPKGVMLTHQNLLHQIKNLWDIVPAEPGDRFLSMLPSWHAYERASEYF 333
Query: 121 IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARAL 180
IF+ GIE +YT V NLK+DL+RYQP Y+ISVPLVYETLYSGIQKQI TSS R++VA
Sbjct: 334 IFTHGIEQVYTTVPNLKEDLRRYQPQYLISVPLVYETLYSGIQKQISTSSTVRKLVALTF 393
Query: 181 IRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKI 240
IRIS AY KRIYEG L ++QKQ SY+ ++ DWLWA+II AILWP+H+L +KLVY KI
Sbjct: 394 IRISLAYMELKRIYEGKFLQKSQKQYSYIASIFDWLWAKIIAAILWPVHMLGKKLVYSKI 453
Query: 241 QSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGH 300
SAIGISKAGVSGGGSLP H+D F+EAI +KVQ GYGLTE SPV AARRPTCNVLGSVGH
Sbjct: 454 HSAIGISKAGVSGGGSLPSHVDRFFEAIDIKVQNGYGLTECSPVTAARRPTCNVLGSVGH 513
Query: 301 PINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIG 360
PI HTEIKIVD+ET+E+LP GSKGIVKV+G VM+GY+KN ATK+ LDEDGWLNTGDIG
Sbjct: 514 PIRHTEIKIVDSETDELLPPGSKGIVKVKGPHVMKGYYKNELATKKVLDEDGWLNTGDIG 573
Query: 361 WIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQD 420
WIAPHHS GRSR CGGV+VLEGRAKDTIVLSTGENVEP ELEEAA+RS+LI+QIVVIGQD
Sbjct: 574 WIAPHHSVGRSRHCGGVIVLEGRAKDTIVLSTGENVEPTELEEAAMRSTLIQQIVVIGQD 633
Query: 421 QRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSKCSFQIGPIH 480
QRR GAIIVP+KEEVL AAKRLSI++A+ SELSKEK LL+ E+R WT SFQIGPI
Sbjct: 634 QRRLGAIIVPNKEEVLAAAKRLSILNANTSELSKEKITGLLHEEIRTWTEGFSFQIGPIL 693
Query: 481 VVDEPFTVN 489
VVDEPFT++
Sbjct: 694 VVDEPFTID 702
>gi|225439252|ref|XP_002263501.1| PREDICTED: long-chain-fatty-acid--CoA ligase FadD15-like [Vitis
vinifera]
Length = 691
Score = 751 bits (1939), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/489 (73%), Positives = 417/489 (85%)
Query: 1 MRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDD 60
+RF++LLWG+KS + ++++ +PVF+Y EIIDLGRE R F DS+ ARK+Y YE I S+D
Sbjct: 175 IRFVVLLWGEKSCLPSEVMDRVPVFNYKEIIDLGRECRSVFLDSHYARKNYIYEAISSND 234
Query: 61 IATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF 120
IAT VYTSGTTGNPKGVMLTH+NLLHQI++L+DIVPAE GD+FLSMLP WH YERA YF
Sbjct: 235 IATLVYTSGTTGNPKGVMLTHQNLLHQIKNLWDIVPAEPGDRFLSMLPSWHAYERASEYF 294
Query: 121 IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARAL 180
IF+ GIE +YT V NLK+DL+RYQP Y+ISVPLVYETLYSGIQKQI TSS R++VA
Sbjct: 295 IFTHGIEQVYTTVPNLKEDLRRYQPQYLISVPLVYETLYSGIQKQISTSSTVRKLVALTF 354
Query: 181 IRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKI 240
IRIS AY KRIYEG L ++QKQ SY+ ++ DWLWA+II AILWP+H+L +KLVY KI
Sbjct: 355 IRISLAYMELKRIYEGKFLQKSQKQYSYIASIFDWLWAKIIAAILWPVHMLGKKLVYSKI 414
Query: 241 QSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGH 300
SAIGISKAGVSGGGSLP H+D F+EAI +KVQ GYGLTE SPV AARRPTCNVLGSVGH
Sbjct: 415 HSAIGISKAGVSGGGSLPSHVDRFFEAIDIKVQNGYGLTECSPVTAARRPTCNVLGSVGH 474
Query: 301 PINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIG 360
PI HTEIKIVD+ET+E+LP GSKGIVKV+G VM+GY+KN ATK+ LDEDGWLNTGDIG
Sbjct: 475 PIRHTEIKIVDSETDELLPPGSKGIVKVKGPHVMKGYYKNELATKKVLDEDGWLNTGDIG 534
Query: 361 WIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQD 420
WIAPHHS GRSR CGGV+VLEGRAKDTIVLSTGENVEP ELEEAA+RS+LI+QIVVIGQD
Sbjct: 535 WIAPHHSVGRSRHCGGVIVLEGRAKDTIVLSTGENVEPTELEEAAMRSTLIQQIVVIGQD 594
Query: 421 QRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSKCSFQIGPIH 480
QRR GAIIVP+KEEVL AAKRLSI++A+ SELSKEK LL+ E+R WT SFQIGPI
Sbjct: 595 QRRLGAIIVPNKEEVLAAAKRLSILNANTSELSKEKITGLLHEEIRTWTEGFSFQIGPIL 654
Query: 481 VVDEPFTVN 489
VVDEPFT++
Sbjct: 655 VVDEPFTID 663
>gi|224055821|ref|XP_002298670.1| predicted protein [Populus trichocarpa]
gi|222845928|gb|EEE83475.1| predicted protein [Populus trichocarpa]
Length = 694
Score = 747 bits (1928), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/488 (73%), Positives = 418/488 (85%)
Query: 2 RFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDI 61
RF+ILLWG+KSS+ + +E IP+F+Y EIIDLGRESRKAF DS DAR+HYKYETI SDDI
Sbjct: 179 RFVILLWGEKSSLTINAMEGIPIFNYKEIIDLGRESRKAFFDSGDARQHYKYETISSDDI 238
Query: 62 ATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFI 121
AT VYTSGTTGNPKGVMLTHKNLLHQI + ++IVPA+ D+FLSMLPPWH YERAC YFI
Sbjct: 239 ATLVYTSGTTGNPKGVMLTHKNLLHQINNFWEIVPAQPADRFLSMLPPWHAYERACEYFI 298
Query: 122 FSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALI 181
F+ G E +YT VRN K DLQ+YQPHY+ISVPLV+ETLYSGIQKQI SS R+++A I
Sbjct: 299 FANGAEQVYTTVRNFKVDLQQYQPHYLISVPLVFETLYSGIQKQISKSSTLRKLLAFTFI 358
Query: 182 RISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQ 241
+IS AY KRIYEG LTR+Q + SY V+++ WL ARI AIL P+H+LAEKLVY KIQ
Sbjct: 359 KISLAYMEMKRIYEGTYLTRSQNEQSYFVSILGWLRARIFAAILLPVHMLAEKLVYSKIQ 418
Query: 242 SAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHP 301
SAIGI KAGVSGGGSLP H+D F+EAIGV + GYG+TESSPV+AAR+ + NVLGSVGHP
Sbjct: 419 SAIGIRKAGVSGGGSLPAHVDKFFEAIGVVLLNGYGMTESSPVLAARQLSNNVLGSVGHP 478
Query: 302 INHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGW 361
I HTE KIVDAET + LP GSKGIV+VRG QVM+GY+KNP ATKQA+DEDGWLNTGD+GW
Sbjct: 479 IRHTEFKIVDAETGKSLPYGSKGIVRVRGPQVMKGYYKNPLATKQAVDEDGWLNTGDLGW 538
Query: 362 IAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQ 421
IAP+HSRG+S RCGG++VLEGRAKDTIVLSTGENVEPLELEEAA++SSLI+QIVVIGQDQ
Sbjct: 539 IAPYHSRGKSCRCGGIIVLEGRAKDTIVLSTGENVEPLELEEAAMKSSLIQQIVVIGQDQ 598
Query: 422 RRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSKCSFQIGPIHV 481
RR GAI+VP+KEEVL AK+LSIV ADA+ELSK++ +LL ELRKWTS+ SFQIGP+ V
Sbjct: 599 RRLGAIVVPNKEEVLEVAKKLSIVDADATELSKKQIANLLDKELRKWTSEASFQIGPVLV 658
Query: 482 VDEPFTVN 489
+DE FT++
Sbjct: 659 IDESFTID 666
>gi|356512427|ref|XP_003524920.1| PREDICTED: putative acyl-CoA synthetase YngI-like [Glycine max]
Length = 733
Score = 736 bits (1901), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/489 (70%), Positives = 415/489 (84%)
Query: 1 MRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDD 60
MRFIILLWG+K+ + + +PVF++ E+IDLGR+SR+A S+++DA + Y YE I +D
Sbjct: 217 MRFIILLWGEKAELVGQENKHVPVFTFMEVIDLGRQSRRALSNAHDAGQRYIYEAINTDS 276
Query: 61 IATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF 120
IAT VYTSGTTGNPKGVMLTH+NLLHQI++L+DIVPAE GD+FLSMLPPWH YERAC YF
Sbjct: 277 IATLVYTSGTTGNPKGVMLTHRNLLHQIKNLWDIVPAEAGDRFLSMLPPWHAYERACEYF 336
Query: 121 IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARAL 180
IF+ GIE +YT VRNLKDDLQRYQP Y+ISVPLV+ETLYSGI KQI T S R++VA
Sbjct: 337 IFTCGIEQVYTTVRNLKDDLQRYQPQYLISVPLVFETLYSGIMKQISTGSVVRKLVALTF 396
Query: 181 IRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKI 240
IR S AY +KRIYEG CLT+N+KQ SY +++DWLWAR I IL PLH+LA+KLVY KI
Sbjct: 397 IRSSIAYMEYKRIYEGKCLTKNKKQASYAYSMLDWLWARTIATILLPLHILAKKLVYSKI 456
Query: 241 QSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGH 300
SAIGISKAG+SGGGSLP +D F+EAIGVKVQ GYGLTE+SPVIAARRP CNV+GSVGH
Sbjct: 457 HSAIGISKAGISGGGSLPWEVDKFFEAIGVKVQNGYGLTETSPVIAARRPRCNVIGSVGH 516
Query: 301 PINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIG 360
PI HTE KIVD+ET+EVLP GSKGI+KVRG QVM+GYFKN AT QALD DGWLNTGDIG
Sbjct: 517 PIRHTEFKIVDSETDEVLPPGSKGILKVRGPQVMEGYFKNSLATNQALDGDGWLNTGDIG 576
Query: 361 WIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQD 420
WI PHHS GRSR GV+V+EGRAKDTIVLSTGENVEPLELEEAA+RSS+I+QIVV+GQD
Sbjct: 577 WIVPHHSTGRSRNSSGVIVVEGRAKDTIVLSTGENVEPLELEEAAMRSSIIQQIVVVGQD 636
Query: 421 QRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSKCSFQIGPIH 480
+RR GA+IVP+KEEVL A++LSI+ +++S++S+EK SL+Y EL+ WTS+ FQIGPI
Sbjct: 637 KRRLGAVIVPNKEEVLKVARKLSIIDSNSSDVSEEKVTSLIYKELKTWTSESPFQIGPIL 696
Query: 481 VVDEPFTVN 489
+V+EPFT++
Sbjct: 697 LVNEPFTID 705
>gi|449527657|ref|XP_004170826.1| PREDICTED: probable acyl-activating enzyme 16, chloroplastic-like,
partial [Cucumis sativus]
Length = 672
Score = 723 bits (1865), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/489 (68%), Positives = 411/489 (84%)
Query: 1 MRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDD 60
MR +ILLWG+KSS+A + V+ I VF Y++I+D+GRESRK S+DA++ Y YE I SDD
Sbjct: 156 MRCVILLWGEKSSLANEGVDGITVFDYNDIMDMGRESRKVMLGSHDAKQCYTYEPINSDD 215
Query: 61 IATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF 120
IAT VYTSGTTGNPKGVMLTH+NLLHQI++L+DIVPA+ GDKFLSMLPPWH YERAC YF
Sbjct: 216 IATLVYTSGTTGNPKGVMLTHRNLLHQIKNLWDIVPAKVGDKFLSMLPPWHAYERACEYF 275
Query: 121 IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARAL 180
IF+ G+E YT +RNLKDDL+ YQP Y+ISVPLVYETLYSGIQKQI SS R+++ A
Sbjct: 276 IFTFGVEQAYTTIRNLKDDLRHYQPDYLISVPLVYETLYSGIQKQILASSNLRKLIVLAF 335
Query: 181 IRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKI 240
I +S AY KRIYEG LTR+ QP++LV+ +DWL+AR+ +ILWP+H+LA+ +VY K+
Sbjct: 336 INVSLAYMELKRIYEGTYLTRSNVQPTHLVSALDWLFARMTASILWPIHMLAKIIVYSKV 395
Query: 241 QSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGH 300
QSAIGI KAG+SGGGSLP H+DLF+EAIG+ VQ GYGLTE SPV+AARRPTCNVLGSVGH
Sbjct: 396 QSAIGIWKAGISGGGSLPSHVDLFFEAIGITVQNGYGLTECSPVVAARRPTCNVLGSVGH 455
Query: 301 PINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIG 360
PI HTE +IVD ET + LP GS+GIV+VRG QVM+GY+KN SAT+Q LD++GW ++GDIG
Sbjct: 456 PIRHTEFRIVDMETGDALPPGSRGIVEVRGPQVMKGYYKNSSATQQVLDKEGWFSSGDIG 515
Query: 361 WIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQD 420
WIAPHHSRGRSRRCGGV+VL+GRAKDTIVL TGENVEP +EEAA+RS+LI+QIVVIGQD
Sbjct: 516 WIAPHHSRGRSRRCGGVIVLDGRAKDTIVLLTGENVEPTVIEEAAMRSTLIQQIVVIGQD 575
Query: 421 QRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSKCSFQIGPIH 480
QRR GAI+ P+KEEVL AAK+LS + S++S E +L+Y E+RKWTS+C FQIGPI
Sbjct: 576 QRRLGAIVFPNKEEVLSAAKKLSAEDSSTSDVSNETLTNLIYSEVRKWTSECPFQIGPIL 635
Query: 481 VVDEPFTVN 489
+V+EPFT++
Sbjct: 636 IVNEPFTID 644
>gi|449441378|ref|XP_004138459.1| PREDICTED: probable acyl-activating enzyme 16, chloroplastic-like
[Cucumis sativus]
Length = 731
Score = 722 bits (1864), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/489 (68%), Positives = 411/489 (84%)
Query: 1 MRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDD 60
MR +ILLWG+KSS+A + V+ I VF Y++I+D+GRESRK S+DA++ Y YE I SDD
Sbjct: 215 MRCVILLWGEKSSLANEGVDGITVFDYNDIMDMGRESRKVMLGSHDAKQCYTYEPINSDD 274
Query: 61 IATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF 120
IAT VYTSGTTGNPKGVMLTH+NLLHQI++L+DIVPA+ GDKFLSMLPPWH YERAC YF
Sbjct: 275 IATLVYTSGTTGNPKGVMLTHRNLLHQIKNLWDIVPAKVGDKFLSMLPPWHAYERACEYF 334
Query: 121 IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARAL 180
IF+ G+E YT +RNLKDDL+ YQP Y+ISVPLVYETLYSGIQKQI SS R+++ A
Sbjct: 335 IFTFGVEQAYTTIRNLKDDLRHYQPDYLISVPLVYETLYSGIQKQILASSNLRKLIVLAF 394
Query: 181 IRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKI 240
I +S AY KRIYEG LTR+ QP++LV+ +DWL+AR+ +ILWP+H+LA+ +VY K+
Sbjct: 395 INVSLAYMELKRIYEGTYLTRSNVQPTHLVSALDWLFARMTASILWPIHMLAKIIVYSKV 454
Query: 241 QSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGH 300
QSAIGI KAG+SGGGSLP H+DLF+EAIG+ VQ GYGLTE SPV+AARRPTCNVLGSVGH
Sbjct: 455 QSAIGIWKAGISGGGSLPSHVDLFFEAIGITVQNGYGLTECSPVVAARRPTCNVLGSVGH 514
Query: 301 PINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIG 360
PI HTE +IVD ET + LP GS+GIV+VRG QVM+GY+KN SAT+Q LD++GW ++GDIG
Sbjct: 515 PIRHTEFRIVDMETGDALPPGSRGIVEVRGPQVMKGYYKNSSATQQVLDKEGWFSSGDIG 574
Query: 361 WIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQD 420
WIAPHHSRGRSRRCGGV+VL+GRAKDTIVL TGENVEP +EEAA+RS+LI+QIVVIGQD
Sbjct: 575 WIAPHHSRGRSRRCGGVIVLDGRAKDTIVLLTGENVEPTVIEEAAMRSTLIQQIVVIGQD 634
Query: 421 QRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSKCSFQIGPIH 480
QRR GAI+ P+KEEVL AAK+LS + S++S E +L+Y E+RKWTS+C FQIGPI
Sbjct: 635 QRRLGAIVFPNKEEVLSAAKKLSAEDSSTSDVSNETLTNLIYSEVRKWTSECPFQIGPIL 694
Query: 481 VVDEPFTVN 489
+V+EPFT++
Sbjct: 695 IVNEPFTID 703
>gi|22331297|ref|NP_189021.2| AMP-dependent synthetase and ligase family protein [Arabidopsis
thaliana]
gi|75311239|sp|Q9LK39.1|AAE16_ARATH RecName: Full=Probable acyl-activating enzyme 16, chloroplastic;
Flags: Precursor
gi|9293952|dbj|BAB01855.1| long-chain-fatty-acid CoA ligase [Arabidopsis thaliana]
gi|332643293|gb|AEE76814.1| AMP-dependent synthetase and ligase family protein [Arabidopsis
thaliana]
Length = 722
Score = 717 bits (1850), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/489 (69%), Positives = 408/489 (83%), Gaps = 3/489 (0%)
Query: 2 RFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDI 61
+F+ILLWG+KSS+ PV+SY+EI G+E R F+ SND+ K Y+YE I DDI
Sbjct: 208 KFVILLWGEKSSLV-TAGRHTPVYSYNEIKKFGQERRAKFARSNDSGK-YEYEYIDPDDI 265
Query: 62 ATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFI 121
AT +YTSGTTGNPKGVMLTH+NLLHQIR+L D VPAE G++FLSMLP WH YERAC YFI
Sbjct: 266 ATIMYTSGTTGNPKGVMLTHQNLLHQIRNLSDFVPAEAGERFLSMLPSWHAYERACEYFI 325
Query: 122 FSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALI 181
F+ G+E YT++R LKDDL+RYQPHY+ISVPLVYETLYSGIQKQI SS AR+ +A LI
Sbjct: 326 FTCGVEQKYTSIRFLKDDLKRYQPHYLISVPLVYETLYSGIQKQISASSPARKFLALTLI 385
Query: 182 RISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQ 241
++S AYT KR+YEG CLT+NQK P Y+V+L+DWLWAR++ LWPLH+LAEKLV++KI+
Sbjct: 386 KVSLAYTEMKRVYEGLCLTKNQKPPMYIVSLVDWLWARVVAFFLWPLHMLAEKLVHRKIR 445
Query: 242 SAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHP 301
S+IGI+KAGVSGGGSLPMH+D F+EAIGV VQ GYGLTE+SPV++ARR CNVLGSVGHP
Sbjct: 446 SSIGITKAGVSGGGSLPMHVDKFFEAIGVNVQNGYGLTETSPVVSARRLRCNVLGSVGHP 505
Query: 302 INHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGW 361
I TE KIVD ET VLP GSKGIVKVRG VM+GY+KNP ATKQ +D+DGW NTGD+GW
Sbjct: 506 IKDTEFKIVDHETGTVLPPGSKGIVKVRGPPVMKGYYKNPLATKQVIDDDGWFNTGDMGW 565
Query: 362 IAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQ 421
I P HS GRSR CGGV+VLEGRAKDTIVLSTGENVEPLE+EEAA+RS+LI+QIVVIGQDQ
Sbjct: 566 ITPQHSTGRSRSCGGVIVLEGRAKDTIVLSTGENVEPLEIEEAAMRSNLIQQIVVIGQDQ 625
Query: 422 RRPGAIIVPDKEEVLMAAK-RLSIVHADASELSKEKTISLLYGELRKWTSKCSFQIGPIH 480
RR GAI++P+KE AAK ++S V ++ +ELSKE S++Y ELRKWTS+CSFQ+GP+
Sbjct: 626 RRLGAIVIPNKEAAEGAAKQKISPVDSEVNELSKETITSMVYEELRKWTSQCSFQVGPVL 685
Query: 481 VVDEPFTVN 489
+VDEPFT++
Sbjct: 686 IVDEPFTID 694
>gi|20799733|gb|AAM28629.1|AF503771_1 acyl-CoA synthetase-like protein [Arabidopsis thaliana]
Length = 722
Score = 716 bits (1849), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/489 (69%), Positives = 408/489 (83%), Gaps = 3/489 (0%)
Query: 2 RFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDI 61
+F+ILLWG+KSS+ PV+SY+EI G+E R F+ SND+ K Y+YE I DDI
Sbjct: 208 KFVILLWGEKSSLV-TAGRHTPVYSYNEIKKFGQERRAKFARSNDSGK-YEYEYIDPDDI 265
Query: 62 ATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFI 121
AT +YTSGTTGNPKGVMLTH+NLLHQIR+L D VPAE G++FLSMLP WH YERAC YFI
Sbjct: 266 ATIMYTSGTTGNPKGVMLTHQNLLHQIRNLSDFVPAEAGERFLSMLPSWHAYERACEYFI 325
Query: 122 FSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALI 181
F+ G+E YT++R LKDDL+RYQPHY+ISVPLVYETLYSGIQKQI SS AR+ +A LI
Sbjct: 326 FTCGVEQKYTSIRFLKDDLKRYQPHYLISVPLVYETLYSGIQKQISASSPARKFLALTLI 385
Query: 182 RISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQ 241
++S AYT KR+YEG CLT+NQK P Y+V+L+DWLWAR++ LWPLH+LAEKLV++KI+
Sbjct: 386 KVSLAYTEMKRVYEGLCLTKNQKPPMYIVSLVDWLWARVVAFFLWPLHMLAEKLVHRKIR 445
Query: 242 SAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHP 301
S+IGI+KAGVSGGGSLPMH+D F+EAIGV VQ GYGLTE+SPV++ARR CNVLGSVGHP
Sbjct: 446 SSIGITKAGVSGGGSLPMHVDKFFEAIGVNVQNGYGLTETSPVVSARRLRCNVLGSVGHP 505
Query: 302 INHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGW 361
I TE KIVD ET VLP GSKGIVKVRG VM+GY+KNP ATKQ +D+DGW NTGD+GW
Sbjct: 506 IKDTEFKIVDHETGTVLPPGSKGIVKVRGPPVMKGYYKNPLATKQVIDDDGWFNTGDMGW 565
Query: 362 IAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQ 421
I P HS GRSR CGGV+VLEGRAKDTIVLSTGENVEPLE+EEAA+RS+LI+QIVVIGQDQ
Sbjct: 566 ITPQHSTGRSRSCGGVIVLEGRAKDTIVLSTGENVEPLEIEEAAMRSNLIQQIVVIGQDQ 625
Query: 422 RRPGAIIVPDKEEVLMAAK-RLSIVHADASELSKEKTISLLYGELRKWTSKCSFQIGPIH 480
RR GAI++P+KE AAK ++S V ++ +ELSKE S++Y ELRKWTS+CSFQ+GP+
Sbjct: 626 RRLGAIVIPNKEAAEGAAKQKISPVDSEVNELSKETITSMVYEELRKWTSQCSFQVGPVL 685
Query: 481 VVDEPFTVN 489
+VDEPFT++
Sbjct: 686 IVDEPFTID 694
>gi|357462831|ref|XP_003601697.1| Annotation was added to scaffolds in November
2011~Long-chain-fatty-acid CoA ligase [Medicago
truncatula]
gi|355490745|gb|AES71948.1| Annotation was added to scaffolds in November
2011~Long-chain-fatty-acid CoA ligase [Medicago
truncatula]
Length = 720
Score = 713 bits (1841), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/490 (68%), Positives = 409/490 (83%), Gaps = 1/490 (0%)
Query: 1 MRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDD 60
+RFIILLWG+KSS+ + + +P++++ E+I+ GR+SR+A S+DAR+HY +ETI DD
Sbjct: 203 IRFIILLWGEKSSLVNEADKGVPIYTFMEVINFGRQSRRALHTSDDAREHYIFETIKLDD 262
Query: 61 IATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPA-ENGDKFLSMLPPWHVYERACGY 119
IAT VYTSGTTGNPKGVMLTH+NLLHQI+ L D+VP E GDKFLSMLPPWH YERAC Y
Sbjct: 263 IATLVYTSGTTGNPKGVMLTHQNLLHQIKHLSDVVPTTEAGDKFLSMLPPWHAYERACEY 322
Query: 120 FIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARA 179
+FSRG+E +YT VRNLKDDL RY+PH M+SVPLV+ETLYSGI KQI TSS R++VA
Sbjct: 323 LVFSRGLEHIYTTVRNLKDDLGRYKPHLMVSVPLVFETLYSGIMKQISTSSLVRKLVALT 382
Query: 180 LIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKK 239
IR+S Y KRIYEG CLT+NQK PSYL A++DWLWARI+ IL+P+H+LA KLVY K
Sbjct: 383 FIRVSLGYMECKRIYEGKCLTKNQKAPSYLYAMLDWLWARIMATILYPVHMLANKLVYSK 442
Query: 240 IQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVG 299
I+S IGIS A +SGGGSLP H+D F+EAIG+ +Q GYGLTE+SPVIAARR C+V+GSVG
Sbjct: 443 IRSTIGISTAAISGGGSLPSHVDKFFEAIGLNLQNGYGLTETSPVIAARRLGCDVIGSVG 502
Query: 300 HPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDI 359
+P+ HTE K+VD+ET EVLP GSKGI+KVRG Q+M+GY+KNP AT + +D DGWLNTGDI
Sbjct: 503 YPLKHTEFKVVDSETGEVLPPGSKGILKVRGPQLMKGYYKNPLATNRVIDSDGWLNTGDI 562
Query: 360 GWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQ 419
GWIA HHS GRSR GGV+V+EGRAKDTIVLS+GENVEP ELEEAA RS+LI+QIVVIGQ
Sbjct: 563 GWIAAHHSTGRSRNSGGVIVVEGRAKDTIVLSSGENVEPGELEEAATRSNLIQQIVVIGQ 622
Query: 420 DQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSKCSFQIGPI 479
D+RR GAIIVP+KEEVL AAK LSI+ +++S++S+EK SL+Y ELR WTS FQIGPI
Sbjct: 623 DKRRLGAIIVPNKEEVLKAAKELSIIDSNSSDVSQEKVTSLIYNELRTWTSGFPFQIGPI 682
Query: 480 HVVDEPFTVN 489
+V++PFT++
Sbjct: 683 LLVNDPFTID 692
>gi|297835432|ref|XP_002885598.1| hypothetical protein ARALYDRAFT_898924 [Arabidopsis lyrata subsp.
lyrata]
gi|297331438|gb|EFH61857.1| hypothetical protein ARALYDRAFT_898924 [Arabidopsis lyrata subsp.
lyrata]
Length = 722
Score = 712 bits (1838), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/489 (69%), Positives = 409/489 (83%), Gaps = 3/489 (0%)
Query: 2 RFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDI 61
+F+ILLWG+KSS+ + PV+SY+EI + G+E R F+ SNDA K Y+YE I DDI
Sbjct: 208 KFVILLWGEKSSLVTAGMP-TPVYSYNEIKNFGQERRAKFARSNDAGK-YEYEFIDPDDI 265
Query: 62 ATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFI 121
AT +YTSGTTGNPKGVMLTH+NLLHQIR+L D VPAE G++FLSMLP WH YERAC YFI
Sbjct: 266 ATIMYTSGTTGNPKGVMLTHQNLLHQIRNLSDFVPAEAGERFLSMLPSWHAYERACEYFI 325
Query: 122 FSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALI 181
F+ G+E YT++R LK DL++YQPHY+ISVPLVYETLYSGIQKQI TSS R+ +A LI
Sbjct: 326 FTCGVEQKYTSIRFLKGDLKQYQPHYLISVPLVYETLYSGIQKQISTSSPVRKFLALTLI 385
Query: 182 RISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQ 241
++S AYT KRIYEG CLT+NQK P Y+V+L+DWLWAR++ +LWPLH+LAEKLV+KKI+
Sbjct: 386 KVSLAYTEMKRIYEGLCLTKNQKPPLYIVSLVDWLWARVVAFVLWPLHILAEKLVHKKIR 445
Query: 242 SAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHP 301
S+IGI+KAGVSGGGSLPMH+D F+EAI V VQ GYGLTE+SPV++ARR CNVLGSVGHP
Sbjct: 446 SSIGITKAGVSGGGSLPMHVDKFFEAISVNVQNGYGLTETSPVVSARRLRCNVLGSVGHP 505
Query: 302 INHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGW 361
I TE KIVD ET VLP GSKGIVKVRG VM+GY+KNP ATKQ +D+DGW NTGD+GW
Sbjct: 506 IKDTEFKIVDHETGTVLPPGSKGIVKVRGPPVMKGYYKNPLATKQVIDDDGWFNTGDMGW 565
Query: 362 IAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQ 421
I P HS GRSR CGGV+VLEGRAKDTIVLSTGENVEPLE+EEAA+RS+LI+QIVVIGQDQ
Sbjct: 566 ITPQHSTGRSRSCGGVIVLEGRAKDTIVLSTGENVEPLEIEEAAMRSNLIQQIVVIGQDQ 625
Query: 422 RRPGAIIVPDKEEVLMAAK-RLSIVHADASELSKEKTISLLYGELRKWTSKCSFQIGPIH 480
RR GAI++P+KE AAK ++S V + +ELSKE+ S++Y EL+KWTS+CSFQ+GP+
Sbjct: 626 RRLGAIVIPNKEAAEGAAKQKISPVDPEVNELSKERITSMVYEELKKWTSQCSFQVGPVL 685
Query: 481 VVDEPFTVN 489
+VDEPFT++
Sbjct: 686 IVDEPFTID 694
>gi|255559194|ref|XP_002520618.1| long-chain-fatty-acid CoA ligase, putative [Ricinus communis]
gi|223540179|gb|EEF41754.1| long-chain-fatty-acid CoA ligase, putative [Ricinus communis]
Length = 627
Score = 705 bits (1820), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/466 (72%), Positives = 395/466 (84%), Gaps = 2/466 (0%)
Query: 3 FIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIA 62
FIILLWG+KSS+A ++ IPVF+Y +I++LGRESR+A DS+DA + Y YETI SDD+A
Sbjct: 164 FIILLWGEKSSLAIKGMDGIPVFNYKQIVNLGRESRRALHDSDDAWQRYVYETISSDDVA 223
Query: 63 TYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIF 122
T +YTSGTTGNPKGVMLTHKNLLHQI +L D+ PAE GD+FLSMLPPWHVYER C Y+I
Sbjct: 224 TVIYTSGTTGNPKGVMLTHKNLLHQINNLLDVFPAEPGDRFLSMLPPWHVYERTCEYYIM 283
Query: 123 SRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIR 182
+ G+E +YT VRNLK+DL++YQPHYM SVPLVYETL GIQKQI SS ++VA IR
Sbjct: 284 TLGVEQVYTIVRNLKEDLKQYQPHYMFSVPLVYETL--GIQKQISRSSTIHKLVALTFIR 341
Query: 183 ISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQS 242
+S AY FKRIYEG LTR QKQPSYL++L+D LWARI+ AIL P+H+LA+ L Y KI
Sbjct: 342 VSLAYMEFKRIYEGTFLTRIQKQPSYLISLLDCLWARIMAAILLPVHMLAKNLFYHKIHL 401
Query: 243 AIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPI 302
AIGISKAG+S GGSLPMH+D F+EAIGVK+Q GYG+TESSPV A RRPTCNVLGS+GHPI
Sbjct: 402 AIGISKAGISAGGSLPMHVDKFFEAIGVKLQNGYGMTESSPVTAVRRPTCNVLGSIGHPI 461
Query: 303 NHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWI 362
HTE K+VDAET+E LP GSKGIVKVRG QVM+GY+KNP ATKQ LDE+GWLNTGDIGWI
Sbjct: 462 RHTEFKVVDAETDEALPDGSKGIVKVRGPQVMKGYYKNPWATKQVLDEEGWLNTGDIGWI 521
Query: 363 APHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQR 422
APHHS GRSR+C GV+VLEGRAKDTIVLSTGEN+EP E+EEAA+RS+LI+QI+VIGQDQR
Sbjct: 522 APHHSIGRSRQCSGVVVLEGRAKDTIVLSTGENIEPSEIEEAAMRSALIQQIIVIGQDQR 581
Query: 423 RPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKW 468
R GAIIVP+KEEVL+AAK+LSI+ A+ SEL KE+ S+L ELR W
Sbjct: 582 RLGAIIVPNKEEVLLAAKKLSIIDANTSELKKEQMASMLDEELRNW 627
>gi|357518659|ref|XP_003629618.1| Annotation was added to scaffolds in November
2011~Long-chain-fatty-acid CoA ligase [Medicago
truncatula]
gi|355523640|gb|AET04094.1| Annotation was added to scaffolds in November
2011~Long-chain-fatty-acid CoA ligase [Medicago
truncatula]
Length = 823
Score = 697 bits (1800), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 349/543 (64%), Positives = 416/543 (76%), Gaps = 54/543 (9%)
Query: 1 MRFIILLWGKKS--SVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGS 58
MRFIILLWG+KS ++ + +E+P+FS+ E+IDLGRESR A SDS++A + Y YE I S
Sbjct: 253 MRFIILLWGEKSDLNLIAEENKEVPIFSFMEVIDLGRESRMALSDSHEASQRYVYEAINS 312
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 118
DDIAT +YTSGTTGNPKGVMLTH+NLLHQI++L+D VPAE GD+FLSMLPPWH YERAC
Sbjct: 313 DDIATLIYTSGTTGNPKGVMLTHRNLLHQIKNLWDTVPAEVGDRFLSMLPPWHAYERACE 372
Query: 119 YFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 178
YFIF+ GIE +YT VRNLKDDL RYQPHYMISVPLV+ETLYSGIQKQI TS R++VA
Sbjct: 373 YFIFTCGIEQVYTTVRNLKDDLGRYQPHYMISVPLVFETLYSGIQKQISTSPPVRKLVAL 432
Query: 179 ALIRISFAYTAFKRIYE----GFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEK 234
IR+S AY +KRIYE G CLTRN KQPS + +++D LWARII IL+P+HLLA K
Sbjct: 433 TFIRVSLAYMEYKRIYEVTLVGKCLTRNVKQPSIVNSMLDCLWARIIATILFPIHLLAIK 492
Query: 235 LVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNV 294
VY KI SAIG+SKAG+SGGGSLP+ +D F+EAIGVKVQ GYGLTE+SPVIAARRP CNV
Sbjct: 493 FVYSKIHSAIGLSKAGISGGGSLPLEVDKFFEAIGVKVQNGYGLTETSPVIAARRPRCNV 552
Query: 295 LGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWL 354
+GSVGHP+ HTE K+VD+ET EVLP GSKGI+KVRG VM GY+KNP AT QALD+DGWL
Sbjct: 553 IGSVGHPVQHTEFKVVDSETGEVLPPGSKGILKVRGPPVMNGYYKNPLATNQALDKDGWL 612
Query: 355 NTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQI 414
NTGD+GWIAPHHS GRSR GV+V++GRAKDTIVLSTGENVEP ELEEAA+RSS+I+QI
Sbjct: 613 NTGDLGWIAPHHSTGRSRNSSGVIVVDGRAKDTIVLSTGENVEPAELEEAAMRSSIIQQI 672
Query: 415 VVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASE-LSKEKTISLLYGELR------- 466
VVIGQD+RR GAIIVP+ EEVL A+ LSI+ + +S +S+EK ++L+Y EL+
Sbjct: 673 VVIGQDKRRLGAIIVPNSEEVLKVARELSIIDSISSNVVSEEKVLNLIYKELKTCDRVIG 732
Query: 467 ----------------KWTS----------------KCS--------FQIGPIHVVDEPF 486
WTS CS FQIGPI +V+EPF
Sbjct: 733 TKYPPALPMSTTAMFTNWTSFLNSDLDVFAFISFFLSCSTYRMSESPFQIGPILLVNEPF 792
Query: 487 TVN 489
T++
Sbjct: 793 TID 795
>gi|2244763|emb|CAB10186.1| AMP-binding protein [Arabidopsis thaliana]
gi|7268112|emb|CAB78449.1| AMP-binding protein [Arabidopsis thaliana]
Length = 698
Score = 697 bits (1799), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/489 (67%), Positives = 400/489 (81%), Gaps = 12/489 (2%)
Query: 1 MRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDD 60
+RF+ILLWG+KSS+ ++ IPV+SY EII+ G+ESR S SND R Y+ + I SDD
Sbjct: 194 LRFLILLWGEKSSLVTQGMQ-IPVYSYAEIINQGQESRAKLSASNDTRS-YRNQFIDSDD 251
Query: 61 IATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF 120
A +YTSGTTGNPKGVMLTH+NLLHQI+ L VPA+ GDKFLSMLP WH YERA YF
Sbjct: 252 TAAIMYTSGTTGNPKGVMLTHRNLLHQIKHLSKYVPAQAGDKFLSMLPSWHAYERASEYF 311
Query: 121 IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARAL 180
IF+ G+E MYT++R LKDDL+RYQP+Y++SVPLVYETLYSGIQKQI SSA R+ +A L
Sbjct: 312 IFTCGVEQMYTSIRYLKDDLKRYQPNYIVSVPLVYETLYSGIQKQISASSAGRKFLALTL 371
Query: 181 IRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKI 240
I++S AY KRIYEG CLT+ QK P Y+VA +DWLWAR+I A+LWPLH+LA+KL+YKKI
Sbjct: 372 IKVSMAYMEMKRIYEGMCLTKEQKPPMYIVAFVDWLWARVIAALLWPLHMLAKKLIYKKI 431
Query: 241 QSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGH 300
S+IGISKAG+SGGGSLP+H+D F+EAIGV +Q GYGLTE+SPV+ AR +CNVLGS GH
Sbjct: 432 HSSIGISKAGISGGGSLPIHVDKFFEAIGVILQNGYGLTETSPVVCARTLSCNVLGSAGH 491
Query: 301 PINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIG 360
P++ TE KIVD ETN VLP GSKGI+KVRG QVM+GY+KNPS TKQ L+E GW NTGD G
Sbjct: 492 PMHGTEFKIVDPETNNVLPPGSKGIIKVRGPQVMKGYYKNPSTTKQVLNESGWFNTGDTG 551
Query: 361 WIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQD 420
WIAPHHS+GRSR CGGV+VLEGRAKDTIVLSTGENVEPLE+EEAA+RS +I QIVVIGQD
Sbjct: 552 WIAPHHSKGRSRHCGGVIVLEGRAKDTIVLSTGENVEPLEIEEAAMRSRVIEQIVVIGQD 611
Query: 421 QRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSKCSFQIGPIH 480
+RR GAII+P+KEE A+R+ E SKE SL+Y ELRKWTS+CSFQ+GP+
Sbjct: 612 RRRLGAIIIPNKEE----AQRVD------PETSKETLKSLVYQELRKWTSECSFQVGPVL 661
Query: 481 VVDEPFTVN 489
+VD+PFT++
Sbjct: 662 IVDDPFTID 670
>gi|22328609|ref|NP_193143.2| long-chain acyl-CoA synthetase [Arabidopsis thaliana]
gi|75304726|sp|Q8W471.1|AAE15_ARATH RecName: Full=Long-chain-fatty-acid--[acyl-carrier-protein] ligase
AEE15, chloroplastic; AltName:
Full=Acyl-[acyl-carrier-protein] synthetase; AltName:
Full=Acyl-activating enzyme 15; Flags: Precursor
gi|17065456|gb|AAL32882.1| A6 anther-specific protein [Arabidopsis thaliana]
gi|34098785|gb|AAQ56775.1| At4g14070 [Arabidopsis thaliana]
gi|118420017|gb|ABK88270.1| chloroplast acyl ACP synthetase [Arabidopsis thaliana]
gi|332657967|gb|AEE83367.1| long-chain acyl-CoA synthetase [Arabidopsis thaliana]
Length = 727
Score = 696 bits (1795), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/489 (67%), Positives = 400/489 (81%), Gaps = 12/489 (2%)
Query: 1 MRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDD 60
+RF+ILLWG+KSS+ ++ IPV+SY EII+ G+ESR S SND R Y+ + I SDD
Sbjct: 223 LRFLILLWGEKSSLVTQGMQ-IPVYSYAEIINQGQESRAKLSASNDTRS-YRNQFIDSDD 280
Query: 61 IATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF 120
A +YTSGTTGNPKGVMLTH+NLLHQI+ L VPA+ GDKFLSMLP WH YERA YF
Sbjct: 281 TAAIMYTSGTTGNPKGVMLTHRNLLHQIKHLSKYVPAQAGDKFLSMLPSWHAYERASEYF 340
Query: 121 IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARAL 180
IF+ G+E MYT++R LKDDL+RYQP+Y++SVPLVYETLYSGIQKQI SSA R+ +A L
Sbjct: 341 IFTCGVEQMYTSIRYLKDDLKRYQPNYIVSVPLVYETLYSGIQKQISASSAGRKFLALTL 400
Query: 181 IRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKI 240
I++S AY KRIYEG CLT+ QK P Y+VA +DWLWAR+I A+LWPLH+LA+KL+YKKI
Sbjct: 401 IKVSMAYMEMKRIYEGMCLTKEQKPPMYIVAFVDWLWARVIAALLWPLHMLAKKLIYKKI 460
Query: 241 QSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGH 300
S+IGISKAG+SGGGSLP+H+D F+EAIGV +Q GYGLTE+SPV+ AR +CNVLGS GH
Sbjct: 461 HSSIGISKAGISGGGSLPIHVDKFFEAIGVILQNGYGLTETSPVVCARTLSCNVLGSAGH 520
Query: 301 PINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIG 360
P++ TE KIVD ETN VLP GSKGI+KVRG QVM+GY+KNPS TKQ L+E GW NTGD G
Sbjct: 521 PMHGTEFKIVDPETNNVLPPGSKGIIKVRGPQVMKGYYKNPSTTKQVLNESGWFNTGDTG 580
Query: 361 WIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQD 420
WIAPHHS+GRSR CGGV+VLEGRAKDTIVLSTGENVEPLE+EEAA+RS +I QIVVIGQD
Sbjct: 581 WIAPHHSKGRSRHCGGVIVLEGRAKDTIVLSTGENVEPLEIEEAAMRSRVIEQIVVIGQD 640
Query: 421 QRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSKCSFQIGPIH 480
+RR GAII+P+KEE A+R+ E SKE SL+Y ELRKWTS+CSFQ+GP+
Sbjct: 641 RRRLGAIIIPNKEE----AQRVD------PETSKETLKSLVYQELRKWTSECSFQVGPVL 690
Query: 481 VVDEPFTVN 489
+VD+PFT++
Sbjct: 691 IVDDPFTID 699
>gi|356538059|ref|XP_003537522.1| PREDICTED: long-chain-fatty-acid--CoA ligase FadD15-like [Glycine
max]
Length = 720
Score = 696 bits (1795), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/489 (70%), Positives = 410/489 (83%)
Query: 1 MRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDD 60
MRFIILLWG+KS + + +E+PVF++ E+I LG+ESR+ DS D RKHY YE I SDD
Sbjct: 204 MRFIILLWGEKSGLVSEGDKEVPVFTFTEVIHLGQESRRVLFDSLDTRKHYMYEAIKSDD 263
Query: 61 IATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF 120
IAT VYTSGTTGNPKGVMLTH+NLLHQI++L DIVPAE GD+FLSMLP WH YERAC YF
Sbjct: 264 IATLVYTSGTTGNPKGVMLTHQNLLHQIKNLGDIVPAEVGDRFLSMLPSWHAYERACEYF 323
Query: 121 IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARAL 180
IFS G+E +YT VRNLK+DL YQPHY+ISVPLVYETLYSGIQKQI TSS R++VA
Sbjct: 324 IFSCGVEQVYTTVRNLKEDLGHYQPHYLISVPLVYETLYSGIQKQISTSSLVRKLVALTF 383
Query: 181 IRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKI 240
IR+S Y KRIYEG CLT++QK PSYL +++DWLWAR++ IL+P+HLLA+ LVY KI
Sbjct: 384 IRVSLRYMECKRIYEGKCLTKDQKPPSYLHSILDWLWARVVATILFPVHLLAKILVYHKI 443
Query: 241 QSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGH 300
SAIGISKAGVSGGGSL H+D F+EAIGV VQ GYGLTE+SPVIAARR + NV+GSVGH
Sbjct: 444 HSAIGISKAGVSGGGSLSSHVDRFFEAIGVNVQNGYGLTETSPVIAARRLSYNVIGSVGH 503
Query: 301 PINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIG 360
PI HTE K+VD+ET+EVLP GSKGI+KVRG Q+M+GY+KNPSAT Q LD DGWLNTGDIG
Sbjct: 504 PIKHTEFKVVDSETDEVLPPGSKGILKVRGPQLMKGYYKNPSATNQVLDRDGWLNTGDIG 563
Query: 361 WIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQD 420
WI PHHS GRSR GV+V++GRAKDTIVLSTGENVEP ELEEAA+RSSLI QIVVIGQD
Sbjct: 564 WIVPHHSTGRSRNSSGVIVVDGRAKDTIVLSTGENVEPGELEEAAMRSSLIHQIVVIGQD 623
Query: 421 QRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSKCSFQIGPIH 480
+RR GA+IVP+KEEVL AA+ SI+ +++S+ S+EK SL+Y ELR WTS+ FQIGP+
Sbjct: 624 KRRLGAVIVPNKEEVLKAARESSIIDSNSSDASQEKVTSLIYKELRTWTSESPFQIGPVL 683
Query: 481 VVDEPFTVN 489
+V++PFT++
Sbjct: 684 LVNDPFTID 692
>gi|20799731|gb|AAM28628.1|AF503770_1 acyl-CoA synthetase-like protein [Arabidopsis thaliana]
Length = 709
Score = 693 bits (1789), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/489 (67%), Positives = 398/489 (81%), Gaps = 12/489 (2%)
Query: 1 MRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDD 60
+RF+ILLWG+KSS+ ++ IPV+SY EII+ G+ESR S SND R Y+ + I SDD
Sbjct: 205 LRFLILLWGEKSSLVTQGMQ-IPVYSYAEIINQGQESRAKLSASNDTRS-YRNQFIDSDD 262
Query: 61 IATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF 120
A +YTSGTTGNPKGVMLTH+NLLHQI+ L VPA GDKFLSMLP WH YERA YF
Sbjct: 263 TAAIMYTSGTTGNPKGVMLTHRNLLHQIKHLSKYVPALAGDKFLSMLPSWHAYERASEYF 322
Query: 121 IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARAL 180
IF+ G+E MYT++R LKDDL+RYQP+Y++SVPLVYETLYSGIQKQI SSA R+ +A L
Sbjct: 323 IFTCGVEQMYTSIRYLKDDLKRYQPNYIVSVPLVYETLYSGIQKQISASSAGRKFLALTL 382
Query: 181 IRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKI 240
I++S AY KRIYEG CLT+ QK P Y+VA +DWLWAR+I A+LWPLH+LA+KL+YKKI
Sbjct: 383 IKVSMAYMEMKRIYEGMCLTKEQKPPMYIVAFVDWLWARVIAALLWPLHMLAKKLIYKKI 442
Query: 241 QSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGH 300
S+IGISKAG+SGGGSLP+H+D F+EAIGV +Q GYGLTE+SPV+ AR +CNVLGS GH
Sbjct: 443 HSSIGISKAGISGGGSLPIHVDKFFEAIGVILQNGYGLTETSPVVCARTLSCNVLGSAGH 502
Query: 301 PINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIG 360
P++ TE KIVD ETN VLP GSKGI+KVRG QVM+GY+KNPS TKQ L+E GW NTGD G
Sbjct: 503 PMHGTEFKIVDPETNNVLPPGSKGIIKVRGPQVMKGYYKNPSTTKQVLNESGWFNTGDTG 562
Query: 361 WIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQD 420
WIAPHHS+GRSR C GV+VLEGRAKDTIVLSTGENVEPLE+EEAA+RS +I QIVVIGQD
Sbjct: 563 WIAPHHSKGRSRHCAGVIVLEGRAKDTIVLSTGENVEPLEIEEAAMRSRVIEQIVVIGQD 622
Query: 421 QRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSKCSFQIGPIH 480
+RR GAII+P+KEE A+R+ E SKE SL+Y ELRKWTS+CSFQ+GP+
Sbjct: 623 RRRLGAIIIPNKEE----AQRVD------PETSKETLKSLVYQELRKWTSECSFQVGPVL 672
Query: 481 VVDEPFTVN 489
+VD+PFT++
Sbjct: 673 IVDDPFTID 681
>gi|297800864|ref|XP_002868316.1| acyl-activating enzyme 15 [Arabidopsis lyrata subsp. lyrata]
gi|297314152|gb|EFH44575.1| acyl-activating enzyme 15 [Arabidopsis lyrata subsp. lyrata]
Length = 727
Score = 692 bits (1786), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/489 (67%), Positives = 400/489 (81%), Gaps = 12/489 (2%)
Query: 1 MRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDD 60
+RF+ILLWG+KSS+ ++ IPV++Y EI + G+ESR S SND R Y+ + I SDD
Sbjct: 223 LRFLILLWGEKSSLVTQGMQ-IPVYTYAEIKNQGQESRAKLSGSNDTRS-YRNQFINSDD 280
Query: 61 IATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF 120
A +YTSGTTGNPKGVMLTH+NLLHQI+ L VPA+ GDKFLSMLP WH YERA YF
Sbjct: 281 TAAIMYTSGTTGNPKGVMLTHRNLLHQIKHLSKYVPAQAGDKFLSMLPSWHAYERASEYF 340
Query: 121 IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARAL 180
IF+ G+E MYT++R LKDDL+RYQP+Y++SVPLVYETLYSG+QKQI SSA R+ +A L
Sbjct: 341 IFTCGVEQMYTSIRYLKDDLKRYQPNYIVSVPLVYETLYSGMQKQISASSAGRKFLALTL 400
Query: 181 IRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKI 240
IR+S AY KRIYEG CLT+ QK P Y+VA +DWLWAR++ A+LWPLH+LA++L+YKKI
Sbjct: 401 IRVSMAYMEMKRIYEGMCLTKEQKPPMYIVAFVDWLWARVVAALLWPLHMLAKRLIYKKI 460
Query: 241 QSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGH 300
S+IGISKAG+SGGGSLP+H+D F+EAIGV +Q GYGLTE+SPV+ AR +CNVLGS G+
Sbjct: 461 YSSIGISKAGISGGGSLPIHVDKFFEAIGVILQNGYGLTETSPVVCARTLSCNVLGSAGN 520
Query: 301 PINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIG 360
P++ TE KIVD ETN VLP GSKGI+KVRG QVM+GY+KNPS TK+ L+E GW NTGD G
Sbjct: 521 PMHGTEFKIVDPETNNVLPPGSKGIIKVRGPQVMKGYYKNPSTTKKVLNESGWFNTGDTG 580
Query: 361 WIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQD 420
WIAPHHSRGRSRRCGGV+VLEGRAKDTIVLSTGENVEPLE+EEAA+RS LI QIVVIGQD
Sbjct: 581 WIAPHHSRGRSRRCGGVIVLEGRAKDTIVLSTGENVEPLEIEEAAMRSRLIEQIVVIGQD 640
Query: 421 QRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSKCSFQIGPIH 480
+RR GAII+P+KEE A+R+ E SKE SL+Y EL+KWTS+CSFQ+GP+
Sbjct: 641 RRRLGAIIIPNKEE----AQRVD------PETSKETQKSLVYQELKKWTSECSFQVGPVL 690
Query: 481 VVDEPFTVN 489
+VDEPFT++
Sbjct: 691 IVDEPFTID 699
>gi|1617272|emb|CAA96521.1| AMP-binding protein [Brassica napus]
Length = 701
Score = 688 bits (1775), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/489 (67%), Positives = 403/489 (82%), Gaps = 16/489 (3%)
Query: 1 MRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDD 60
+RF+ILLWG+KSS+ ++ IPV+SY +I +LG+E R + SND RK +I DD
Sbjct: 201 LRFLILLWGEKSSLVTQGMQ-IPVYSYTDIKNLGQEKR---AGSNDTRK-----SINPDD 251
Query: 61 IATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF 120
A +YTSGTTGNPKGVMLTH+NLLHQI+ L VPAE GD+FLSMLP WH YERAC YF
Sbjct: 252 TAAIMYTSGTTGNPKGVMLTHRNLLHQIKHLSAYVPAEAGDRFLSMLPSWHAYERACEYF 311
Query: 121 IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARAL 180
IF+ G+E MYT++R LK+DL+RYQPHY+ISVPLVYETLYSGIQKQI TSSAAR+ +A L
Sbjct: 312 IFTCGVEQMYTSIRFLKEDLKRYQPHYLISVPLVYETLYSGIQKQISTSSAARKYLALTL 371
Query: 181 IRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKI 240
I+IS AY KRIYEG CLT+ QK P Y+V+L+DWL AR++ A+LWPLH+LA+ L+YKKI
Sbjct: 372 IKISLAYMEMKRIYEGMCLTKEQKPPMYIVSLVDWLRARVVAALLWPLHMLAKILIYKKI 431
Query: 241 QSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGH 300
++IGISKAG+SGGGSLP+HID F+EAIGV +Q GYGLTE+SPVI AR +CNV+GS G+
Sbjct: 432 HASIGISKAGISGGGSLPIHIDKFFEAIGVILQNGYGLTETSPVICARTLSCNVIGSAGY 491
Query: 301 PINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIG 360
P++ TE KIVD ETN VLP GSKGIVKVRG Q+M+GY+KNP+ TKQ L+E GW NTGD+G
Sbjct: 492 PMHGTEFKIVDPETNTVLPPGSKGIVKVRGPQIMKGYYKNPTTTKQVLNESGWFNTGDMG 551
Query: 361 WIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQD 420
WIAPHHS GRSRRCGG++VLEGRAKDTIVLSTGENVEPLE+EEAA+RS LI QIVVIGQD
Sbjct: 552 WIAPHHSTGRSRRCGGLIVLEGRAKDTIVLSTGENVEPLEIEEAAMRSRLIDQIVVIGQD 611
Query: 421 QRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSKCSFQIGPIH 480
QRR GAII+P+KEE A++L + S+LS EK SL+Y ELRKWTS+CSFQ+GP+
Sbjct: 612 QRRLGAIIMPNKEE----AEKLD---PETSQLSSEKLKSLVYQELRKWTSECSFQVGPVL 664
Query: 481 VVDEPFTVN 489
+VDEPFT++
Sbjct: 665 IVDEPFTID 673
>gi|357114733|ref|XP_003559149.1| PREDICTED: long-chain-fatty-acid--CoA ligase FadD15-like
[Brachypodium distachyon]
Length = 709
Score = 670 bits (1729), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 323/488 (66%), Positives = 402/488 (82%), Gaps = 1/488 (0%)
Query: 2 RFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDI 61
RF++LLWG KSS+ V++IPV+ Y++I LGRE+R A +S++ + +E I +D+
Sbjct: 195 RFVVLLWGDKSSLNSKAVKDIPVYDYNDITQLGRENRNAVHNSHEQGQQGVFEAITPEDV 254
Query: 62 ATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFI 121
AT +YTSGT G PKGVMLTH+NLLHQI +L+DIVPA GD+FLSMLPPWH YER+ YFI
Sbjct: 255 ATLIYTSGTGGTPKGVMLTHRNLLHQINNLWDIVPAVPGDRFLSMLPPWHAYERSTEYFI 314
Query: 122 FSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALI 181
F+ GI+ +YTAV+ LK+DLQRYQPHY+ISVPLVYETLYS IQ+QI +SS AR+ +A ALI
Sbjct: 315 FTCGIQQVYTAVKYLKEDLQRYQPHYVISVPLVYETLYSSIQRQISSSSTARKTLALALI 374
Query: 182 RISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQ 241
+IS Y K+IYEG L+ N +PS++V +++ LWARII A+LWP H LA+ LVYKKI
Sbjct: 375 KISLQYMESKKIYEGTVLSNNPVEPSHIVCMVNCLWARIIVALLWPFHNLAKLLVYKKIH 434
Query: 242 SAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHP 301
S+IGISKAG+SGGGSLPMH+D F+EAIG+KVQ GYGLTE+SPV+AARRP CNVLG+VGHP
Sbjct: 435 SSIGISKAGISGGGSLPMHVDKFFEAIGIKVQNGYGLTETSPVVAARRPFCNVLGTVGHP 494
Query: 302 INHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGW 361
+ HTEIK+VD ET E LP GSKGIVK++G VM+GY+KNPSAT +ALD++GW NTGDIGW
Sbjct: 495 VKHTEIKVVDIETGEALPDGSKGIVKIKGPPVMKGYYKNPSATNKALDQEGWFNTGDIGW 554
Query: 362 IAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQ 421
+APHH+ G SR+CGG+LVLEGRAKDTIVL+TGENVEP ELEEAA RS+LI+QI+VIGQD+
Sbjct: 555 LAPHHTTGPSRKCGGMLVLEGRAKDTIVLTTGENVEPAELEEAAGRSNLIQQIMVIGQDR 614
Query: 422 RRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSKCSFQIGPIHV 481
RR GAIIVP+ +EVL AKR S + D +EL+K ++LLY ELR WT CSFQIGPI +
Sbjct: 615 RRLGAIIVPNNDEVLATAKRKSRLDGD-NELAKATILNLLYDELRAWTVGCSFQIGPILI 673
Query: 482 VDEPFTVN 489
VDEPFT++
Sbjct: 674 VDEPFTID 681
>gi|108712074|gb|ABF99869.1| AMP-binding protein, putative, expressed [Oryza sativa Japonica
Group]
Length = 545
Score = 670 bits (1729), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 323/488 (66%), Positives = 398/488 (81%), Gaps = 1/488 (0%)
Query: 2 RFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDI 61
RFI+LLWG+KS + ++V IP++ + +I LGRESR S++ + +ETI DD+
Sbjct: 31 RFIVLLWGEKSCLNSEVVNGIPLYDFKDITQLGRESRNTLRHSHEQGQQVVFETITPDDV 90
Query: 62 ATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFI 121
AT +YTSGT+G PKGVMLTH+NLLHQI++L+D VPA GD+FLSMLPPWH YERA YFI
Sbjct: 91 ATLIYTSGTSGTPKGVMLTHRNLLHQIKNLWDFVPAVPGDRFLSMLPPWHAYERASEYFI 150
Query: 122 FSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALI 181
F+ GI+ +YT V+ LK+DLQRYQP Y++SVPLVYE LYS IQ+QI +SS AR+ VA ALI
Sbjct: 151 FTYGIQQVYTTVKYLKEDLQRYQPQYIVSVPLVYEILYSSIQRQISSSSTARKFVALALI 210
Query: 182 RISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQ 241
+IS Y KRIYEG L+ N +PS++V +++WL ARI+ A+LWPLH LA+ LVYKKI
Sbjct: 211 KISLLYMEAKRIYEGTVLSNNPVKPSFIVYMVNWLSARIVAALLWPLHNLAKTLVYKKIH 270
Query: 242 SAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHP 301
SAIGISKAG+SGGGSLPMH+D F+EAIGVKVQ GYGLTE+SPV+AARRP CNVLG+VGHP
Sbjct: 271 SAIGISKAGISGGGSLPMHVDKFFEAIGVKVQNGYGLTETSPVVAARRPFCNVLGTVGHP 330
Query: 302 INHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGW 361
+ HTEIK+VD ET EVLP GSKG+VKVRG QVM+GY+KNPSAT + LD++GW +TGDIGW
Sbjct: 331 VKHTEIKVVDMETGEVLPDGSKGVVKVRGPQVMKGYYKNPSATNKVLDQEGWFDTGDIGW 390
Query: 362 IAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQ 421
IAPH G SR+CGG+LVLEGRAKDTIVL+TGENVEP E+EEAA RS LI QIVV+GQD+
Sbjct: 391 IAPHCPTGPSRKCGGMLVLEGRAKDTIVLTTGENVEPAEIEEAASRSDLINQIVVVGQDK 450
Query: 422 RRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSKCSFQIGPIHV 481
RR GA+IVP+ +EVL AKR SI+ + +EL+K+K ++LLY ELR W CSFQIGPI +
Sbjct: 451 RRIGALIVPNYDEVLATAKRKSILDGN-NELAKDKVLNLLYDELRTWMVDCSFQIGPILI 509
Query: 482 VDEPFTVN 489
VDEPFTV+
Sbjct: 510 VDEPFTVD 517
>gi|115456555|ref|NP_001051878.1| Os03g0845500 [Oryza sativa Japonica Group]
gi|41469655|gb|AAS07378.1| putative AMP-binding protein [Oryza sativa Japonica Group]
gi|108712073|gb|ABF99868.1| AMP-binding protein, putative, expressed [Oryza sativa Japonica
Group]
gi|113550349|dbj|BAF13792.1| Os03g0845500 [Oryza sativa Japonica Group]
gi|222626158|gb|EEE60290.1| hypothetical protein OsJ_13349 [Oryza sativa Japonica Group]
Length = 750
Score = 670 bits (1728), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 323/488 (66%), Positives = 398/488 (81%), Gaps = 1/488 (0%)
Query: 2 RFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDI 61
RFI+LLWG+KS + ++V IP++ + +I LGRESR S++ + +ETI DD+
Sbjct: 236 RFIVLLWGEKSCLNSEVVNGIPLYDFKDITQLGRESRNTLRHSHEQGQQVVFETITPDDV 295
Query: 62 ATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFI 121
AT +YTSGT+G PKGVMLTH+NLLHQI++L+D VPA GD+FLSMLPPWH YERA YFI
Sbjct: 296 ATLIYTSGTSGTPKGVMLTHRNLLHQIKNLWDFVPAVPGDRFLSMLPPWHAYERASEYFI 355
Query: 122 FSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALI 181
F+ GI+ +YT V+ LK+DLQRYQP Y++SVPLVYE LYS IQ+QI +SS AR+ VA ALI
Sbjct: 356 FTYGIQQVYTTVKYLKEDLQRYQPQYIVSVPLVYEILYSSIQRQISSSSTARKFVALALI 415
Query: 182 RISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQ 241
+IS Y KRIYEG L+ N +PS++V +++WL ARI+ A+LWPLH LA+ LVYKKI
Sbjct: 416 KISLLYMEAKRIYEGTVLSNNPVKPSFIVYMVNWLSARIVAALLWPLHNLAKTLVYKKIH 475
Query: 242 SAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHP 301
SAIGISKAG+SGGGSLPMH+D F+EAIGVKVQ GYGLTE+SPV+AARRP CNVLG+VGHP
Sbjct: 476 SAIGISKAGISGGGSLPMHVDKFFEAIGVKVQNGYGLTETSPVVAARRPFCNVLGTVGHP 535
Query: 302 INHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGW 361
+ HTEIK+VD ET EVLP GSKG+VKVRG QVM+GY+KNPSAT + LD++GW +TGDIGW
Sbjct: 536 VKHTEIKVVDMETGEVLPDGSKGVVKVRGPQVMKGYYKNPSATNKVLDQEGWFDTGDIGW 595
Query: 362 IAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQ 421
IAPH G SR+CGG+LVLEGRAKDTIVL+TGENVEP E+EEAA RS LI QIVV+GQD+
Sbjct: 596 IAPHCPTGPSRKCGGMLVLEGRAKDTIVLTTGENVEPAEIEEAASRSDLINQIVVVGQDK 655
Query: 422 RRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSKCSFQIGPIHV 481
RR GA+IVP+ +EVL AKR SI+ + +EL+K+K ++LLY ELR W CSFQIGPI +
Sbjct: 656 RRIGALIVPNYDEVLATAKRKSILDGN-NELAKDKVLNLLYDELRTWMVDCSFQIGPILI 714
Query: 482 VDEPFTVN 489
VDEPFTV+
Sbjct: 715 VDEPFTVD 722
>gi|357462833|ref|XP_003601698.1| Annotation was added to scaffolds in November
2011~Long-chain-fatty-acid CoA ligase [Medicago
truncatula]
gi|355490746|gb|AES71949.1| Annotation was added to scaffolds in November
2011~Long-chain-fatty-acid CoA ligase [Medicago
truncatula]
Length = 512
Score = 660 bits (1704), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 312/444 (70%), Positives = 372/444 (83%), Gaps = 1/444 (0%)
Query: 47 ARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPA-ENGDKFLS 105
A +HY +ETI DDIAT VYTSGTTGNPKGVMLTH+NLLHQI+ L D+VP E GDKFLS
Sbjct: 41 AGEHYIFETIKLDDIATLVYTSGTTGNPKGVMLTHQNLLHQIKHLSDVVPTTEAGDKFLS 100
Query: 106 MLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQ 165
MLPPWH YERAC Y +FSRG+E +YT VRNLKDDL RY+PH M+SVPLV+ETLYSGI KQ
Sbjct: 101 MLPPWHAYERACEYLVFSRGLEHIYTTVRNLKDDLGRYKPHLMVSVPLVFETLYSGIMKQ 160
Query: 166 IFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAIL 225
I TSS R++VA IR+S Y KRIYEG CLT+NQK PSYL A++DWLWARI+ IL
Sbjct: 161 ISTSSLVRKLVALTFIRVSLGYMECKRIYEGKCLTKNQKAPSYLYAMLDWLWARIMATIL 220
Query: 226 WPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVI 285
+P+H+LA KLVY KI+S IGIS A +SGGGSLP H+D F+EAIG+ +Q GYGLTE+SPVI
Sbjct: 221 YPVHMLANKLVYSKIRSTIGISTAAISGGGSLPSHVDKFFEAIGLNLQNGYGLTETSPVI 280
Query: 286 AARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATK 345
AARR C+V+GSVG+P+ HTE K+VD+ET EVLP GSKGI+KVRG Q+M+GY+KNP AT
Sbjct: 281 AARRLGCDVIGSVGYPLKHTEFKVVDSETGEVLPPGSKGILKVRGPQLMKGYYKNPLATN 340
Query: 346 QALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAA 405
+ +D DGWLNTGDIGWIA HHS GRSR GGV+V+EGRAKDTIVLS+GENVEP ELEEAA
Sbjct: 341 RVIDSDGWLNTGDIGWIAAHHSTGRSRNSGGVIVVEGRAKDTIVLSSGENVEPGELEEAA 400
Query: 406 LRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGEL 465
RS+LI+QIVVIGQD+RR GAIIVP+KEEVL AAK LSI+ +++S++S+EK SL+Y EL
Sbjct: 401 TRSNLIQQIVVIGQDKRRLGAIIVPNKEEVLKAAKELSIIDSNSSDVSQEKVTSLIYNEL 460
Query: 466 RKWTSKCSFQIGPIHVVDEPFTVN 489
R WTS FQIGPI +V++PFT++
Sbjct: 461 RTWTSGFPFQIGPILLVNDPFTID 484
>gi|218194090|gb|EEC76517.1| hypothetical protein OsI_14303 [Oryza sativa Indica Group]
Length = 682
Score = 626 bits (1615), Expect = e-177, Method: Compositional matrix adjust.
Identities = 303/437 (69%), Positives = 366/437 (83%), Gaps = 1/437 (0%)
Query: 53 YETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHV 112
+ETI DD+AT +YTSGT+G PKGVMLTH+NLLHQI++L+D VPA GD+FLSMLPPWH
Sbjct: 219 FETITPDDVATLIYTSGTSGTPKGVMLTHRNLLHQIKNLWDFVPAVPGDRFLSMLPPWHA 278
Query: 113 YERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAA 172
YERA YFIF+ GI+ +YT V+ LK+DLQRYQP Y++SVPLVYE LYS IQ+QI +SS A
Sbjct: 279 YERASEYFIFTYGIQQVYTTVKYLKEDLQRYQPQYIVSVPLVYEILYSSIQRQISSSSTA 338
Query: 173 RRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLA 232
R+ VA ALI+IS Y KRIYEG L+ N +PS++V +++WL ARI+ A+LWPLH LA
Sbjct: 339 RKFVALALIKISLLYMEAKRIYEGTVLSNNPVKPSFIVYMVNWLSARIVAALLWPLHNLA 398
Query: 233 EKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTC 292
+ LVYKKI SAIGISKAG+SGGGSLPMH+D F+EAIGVKVQ GYGLTE+SPV+AARRP C
Sbjct: 399 KTLVYKKIHSAIGISKAGISGGGSLPMHVDKFFEAIGVKVQNGYGLTETSPVVAARRPFC 458
Query: 293 NVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDG 352
NVLG+VGHP+ HTEIK+VD ET EVLP GSKG+VKVRG QVM+GY+KNPSAT + LD++G
Sbjct: 459 NVLGTVGHPVKHTEIKVVDMETGEVLPDGSKGVVKVRGPQVMKGYYKNPSATNKVLDQEG 518
Query: 353 WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIR 412
W +TGDIGWIAPH G SR+CGG+LVLEGRAKDTIVL+TGENVEP E+EEAA RS LI
Sbjct: 519 WFDTGDIGWIAPHCPTGPSRKCGGMLVLEGRAKDTIVLTTGENVEPAEIEEAASRSDLIN 578
Query: 413 QIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSKC 472
QIVV+GQD+RR GA+IVP+ +EVL AKR SI+ ++EL+K+K ++LLY ELR W C
Sbjct: 579 QIVVVGQDKRRIGALIVPNYDEVLATAKRKSILDG-SNELAKDKVLNLLYDELRTWMVDC 637
Query: 473 SFQIGPIHVVDEPFTVN 489
SFQIGPI +VDEPFTV+
Sbjct: 638 SFQIGPILIVDEPFTVD 654
>gi|62321026|dbj|BAD94085.1| A6 anther-specific protein [Arabidopsis thaliana]
Length = 402
Score = 571 bits (1471), Expect = e-160, Method: Compositional matrix adjust.
Identities = 267/384 (69%), Positives = 320/384 (83%), Gaps = 10/384 (2%)
Query: 106 MLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQ 165
MLP WH YERA YFIF+ G+E MYT++R LKDDL+RYQP+Y++SVPLVYETLYSGIQKQ
Sbjct: 1 MLPSWHAYERASEYFIFTCGVEQMYTSIRYLKDDLKRYQPNYIVSVPLVYETLYSGIQKQ 60
Query: 166 IFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAIL 225
I SSA R+ +A LI++S AY KRIYEG CLT+ QK P Y+VA +DWLWAR+I A+L
Sbjct: 61 ISASSAGRKFLALTLIKVSMAYMEMKRIYEGMCLTKEQKPPMYIVAFVDWLWARVIAALL 120
Query: 226 WPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVI 285
WPLH+LA+KL+YKKI S+IGISKAG+SGGGSLP+H+D F+EAIGV +Q GYGLTE+SPV+
Sbjct: 121 WPLHMLAKKLIYKKIHSSIGISKAGISGGGSLPIHVDKFFEAIGVILQNGYGLTETSPVV 180
Query: 286 AARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATK 345
AR +CNVLGS GHP++ TE KIVD ETN VLP GSKGI+KVRG QVM+GY+KNPS TK
Sbjct: 181 CARTLSCNVLGSAGHPMHGTEFKIVDPETNNVLPPGSKGIIKVRGPQVMKGYYKNPSTTK 240
Query: 346 QALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAA 405
Q L+E GW NTGD GWIAPHHS+GRSR CGGV+VLEGRAKDTIVLSTGENVEPLE+EEAA
Sbjct: 241 QVLNESGWFNTGDTGWIAPHHSKGRSRHCGGVIVLEGRAKDTIVLSTGENVEPLEIEEAA 300
Query: 406 LRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGEL 465
+RS +I QIVVIGQD+RR GAII+P+KEE A+R+ E SKE SL+Y EL
Sbjct: 301 MRSRVIEQIVVIGQDRRRLGAIIIPNKEE----AQRVD------PETSKETLKSLVYQEL 350
Query: 466 RKWTSKCSFQIGPIHVVDEPFTVN 489
RKWTS+CSFQ+GP+ +VD+PFT++
Sbjct: 351 RKWTSECSFQVGPVLIVDDPFTID 374
>gi|255559188|ref|XP_002520615.1| long-chain-fatty-acid CoA ligase, putative [Ricinus communis]
gi|223540176|gb|EEF41751.1| long-chain-fatty-acid CoA ligase, putative [Ricinus communis]
Length = 571
Score = 521 bits (1343), Expect = e-145, Method: Compositional matrix adjust.
Identities = 246/337 (72%), Positives = 286/337 (84%)
Query: 3 FIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIA 62
FIILLWG+KS + ++ IPVF+Y +I+DLGRESRK DS+DA + Y YETI SDD+A
Sbjct: 228 FIILLWGEKSGLDIKGMDGIPVFNYKQIVDLGRESRKVLLDSDDAWRQYVYETISSDDVA 287
Query: 63 TYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIF 122
T VYTSGTTGNPKGVMLTHKNLLHQI +L D+VPAE GD+FLSMLPPWH YERAC YFI
Sbjct: 288 TLVYTSGTTGNPKGVMLTHKNLLHQINNLLDVVPAEPGDRFLSMLPPWHAYERACEYFIM 347
Query: 123 SRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIR 182
+ G+E ++T VRNLK+DL+ YQPHYMISVPLVYETLYSGIQKQI TSS R++VA IR
Sbjct: 348 TLGVEQVFTTVRNLKEDLKHYQPHYMISVPLVYETLYSGIQKQISTSSTIRKLVALTFIR 407
Query: 183 ISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQS 242
+S AY FKRIYEG LTR QKQPSYL++L+D LWARI+ AIL P+H+LA+KLVY+KI
Sbjct: 408 VSLAYMEFKRIYEGTYLTRIQKQPSYLISLLDCLWARIMAAILLPVHMLAKKLVYRKIHL 467
Query: 243 AIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPI 302
AIGISKAG+SGGGSLPMH+D F+EAIGVKVQ GYG+TESSPV AARRPTCNVLGS+GHPI
Sbjct: 468 AIGISKAGISGGGSLPMHVDKFFEAIGVKVQNGYGMTESSPVTAARRPTCNVLGSIGHPI 527
Query: 303 NHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFK 339
HTE K+VDAET+E P GSKGIVKV+G QVM+GY+K
Sbjct: 528 RHTEFKVVDAETDEAFPDGSKGIVKVKGPQVMKGYYK 564
>gi|302775100|ref|XP_002970967.1| hypothetical protein SELMODRAFT_95195 [Selaginella moellendorffii]
gi|300160949|gb|EFJ27565.1| hypothetical protein SELMODRAFT_95195 [Selaginella moellendorffii]
Length = 616
Score = 514 bits (1325), Expect = e-143, Method: Compositional matrix adjust.
Identities = 259/489 (52%), Positives = 345/489 (70%), Gaps = 34/489 (6%)
Query: 1 MRFIILLWGKK-SSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSD 59
++F++LLWG+K S A PVF+Y+E I LG++SR+ ++ + + S
Sbjct: 129 LKFVVLLWGQKPESFA------FPVFTYEECISLGQKSREKPGTTS--------KILWSF 174
Query: 60 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGY 119
D+AT VYTSGTTGNPKGVMLTH N++HQ++ L + GD+FLS+LPPWH+YER Y
Sbjct: 175 DVATIVYTSGTTGNPKGVMLTHANIIHQMKYLDQCIQPVPGDRFLSLLPPWHMYERVAEY 234
Query: 120 FIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARA 179
F F+RGIE +YT+V+ LKDDLQ Y Y +SVPLVY+TLYSG+QKQ+ +S RR +
Sbjct: 235 FTFTRGIEQVYTSVKFLKDDLQAYPTQYFVSVPLVYDTLYSGVQKQLSKASGLRRALVMG 294
Query: 180 LIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKK 239
+ IS + KRI EG LTR ++ P+ L + A ++ IL PLH L +K+V+ K
Sbjct: 295 FMAISSFFKDLKRISEGRSLTRAREHPNRLECFL----AGVMAMILSPLHFLGDKIVFSK 350
Query: 240 IQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVG 299
I++AIGI KAG+SGGGSLP H+D F+E +G+ + GYGLTESSPV++ R + NVLG+VG
Sbjct: 351 IRAAIGIRKAGISGGGSLPKHVDKFFEVVGITLLNGYGLTESSPVVSTRAFSDNVLGTVG 410
Query: 300 HPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDI 359
P+ TE+KIVD E+ + L G+KGIV VRG QVM+GY+KNP AT++A+D DGWL+TGD+
Sbjct: 411 MPLRETEVKIVDPESRKTLANGNKGIVTVRGPQVMKGYYKNPDATQKAIDGDGWLDTGDL 470
Query: 360 GWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQ 419
GW+AP G +R+CGG+LVLEGRAK+TIVLSTGENVEP E+EEAAL+SSLI QI+V+GQ
Sbjct: 471 GWVAPVWKTGAARKCGGMLVLEGRAKETIVLSTGENVEPTEIEEAALQSSLIDQIMVVGQ 530
Query: 420 DQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSKCSFQIGPI 479
DQRR GA+IV K+ +A L SL+ EL++ TS CSFQIGP
Sbjct: 531 DQRRLGALIVASKDTAATSANDLK---------------SLVREELQRCTSSCSFQIGPF 575
Query: 480 HVVDEPFTV 488
+V+EPFT+
Sbjct: 576 VIVNEPFTM 584
>gi|302757391|ref|XP_002962119.1| hypothetical protein SELMODRAFT_76207 [Selaginella moellendorffii]
gi|300170778|gb|EFJ37379.1| hypothetical protein SELMODRAFT_76207 [Selaginella moellendorffii]
Length = 617
Score = 513 bits (1321), Expect = e-143, Method: Compositional matrix adjust.
Identities = 259/489 (52%), Positives = 342/489 (69%), Gaps = 33/489 (6%)
Query: 1 MRFIILLWGKK-SSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSD 59
++F++LLWG+K S A PVF+Y+E I LG++SR+ ++ I
Sbjct: 129 LKFVVLLWGQKPESFA------FPVFTYEECISLGQKSREKPGTTSAL-------PIQPQ 175
Query: 60 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGY 119
D+AT VYTSGTTGNPKGVMLTH N++HQ++ L + GD+FLS+LPPWH+YER Y
Sbjct: 176 DVATIVYTSGTTGNPKGVMLTHANIIHQMKYLDQCIQPVPGDRFLSLLPPWHMYERVAEY 235
Query: 120 FIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARA 179
F F+RGIE +YT V+ LKDDLQ Y Y +SVPLVY+TLYSG+QKQ+ +S RR +
Sbjct: 236 FTFTRGIEQVYTTVKFLKDDLQAYPTQYFVSVPLVYDTLYSGVQKQLSKASGLRRALVMG 295
Query: 180 LIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKK 239
+ IS + KRI EG LTR ++ P+ L + A ++ IL PLH L +K+V+ K
Sbjct: 296 FMAISSFFKDLKRISEGRSLTRAKEHPNRLECFL----AGVMAMILSPLHFLGDKIVFSK 351
Query: 240 IQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVG 299
I++AIGI KAG+SGGGSLP H+D F+E +G+ + GYGLTESSPV++ R + NVLG+VG
Sbjct: 352 IRAAIGIQKAGISGGGSLPKHVDKFFEVVGITLLNGYGLTESSPVVSTRAFSDNVLGTVG 411
Query: 300 HPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDI 359
P+ TE+KIVD E+ + L G+KGIV VRG QVM+GY+KNP AT++A+D DGWL+TGD+
Sbjct: 412 MPLPETEVKIVDPESRKPLANGNKGIVTVRGPQVMKGYYKNPDATQKAIDGDGWLDTGDL 471
Query: 360 GWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQ 419
GW+AP G +R+CGG+LVLEGRAK+TIVLSTGENVEP E+EEAAL+SSLI QI+V+GQ
Sbjct: 472 GWVAPVWKTGAARKCGGMLVLEGRAKETIVLSTGENVEPTEIEEAALQSSLIDQIMVVGQ 531
Query: 420 DQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSKCSFQIGPI 479
DQRR GA+IV K+ +A L SL+ EL++ TS CSFQIGP
Sbjct: 532 DQRRLGALIVASKDTAATSANDLK---------------SLVREELQRCTSSCSFQIGPF 576
Query: 480 HVVDEPFTV 488
+V+EPFT+
Sbjct: 577 VIVNEPFTM 585
>gi|168050144|ref|XP_001777520.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671138|gb|EDQ57695.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 778
Score = 488 bits (1255), Expect = e-135, Method: Compositional matrix adjust.
Identities = 243/490 (49%), Positives = 344/490 (70%), Gaps = 3/490 (0%)
Query: 1 MRFIILLWGKKSSVAPDIVE--EIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGS 58
++F+I+LW K ++ D+ + E+P +S+DE++ GR SR+A + + + + + I
Sbjct: 256 IKFVIVLWTSKDTLK-DLKDGSEVPFYSFDELMASGRTSRQALAAVASSGERVQCDVIHP 314
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 118
DD+AT VYTSGTTGNPKGVMLTH NLLHQI L +V GD+FLS+LPPWH+YER+
Sbjct: 315 DDVATLVYTSGTTGNPKGVMLTHANLLHQIVHLGSVVQPGPGDRFLSLLPPWHMYERSAE 374
Query: 119 YFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 178
YF SRG+ +YT+V+ LK+DL RY P Y ++VPLV++ LYSG+QKQI S R+ +A
Sbjct: 375 YFALSRGVSQVYTSVKTLKEDLARYPPDYFVAVPLVFDILYSGVQKQIAAGSKFRKQIAL 434
Query: 179 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 238
L+ +S + KR EG +T+ ++ S + A W A I +L P HLLA+KLVY
Sbjct: 435 TLLSLSLKFVDIKRKQEGRDVTKGRESFSPVAAAKVWAIATIGALLLLPFHLLAQKLVYS 494
Query: 239 KIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSV 298
KI ++IGI KA +SGGGSLP ++D F+EAIG++V GYGLTE+SPV++ R P+ NVLG+V
Sbjct: 495 KILASIGIKKAAISGGGSLPPYVDRFFEAIGIRVLNGYGLTETSPVVSCRLPSNNVLGTV 554
Query: 299 GHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGD 358
G PI TEIK+VD + ++P G KG VK+RG QVM+GY+KNP+AT +A+D DGW TGD
Sbjct: 555 GGPIPETEIKVVDPNSGNIVPPGIKGSVKIRGPQVMKGYYKNPAATSKAIDSDGWFETGD 614
Query: 359 IGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIG 418
+GW P G +R CGG+LVL+GRAKDTIVLSTGENVEP E+EEA ++S LI+ ++++G
Sbjct: 615 LGWKVPSSPVGPARMCGGLLVLDGRAKDTIVLSTGENVEPQEIEEAIMQSKLIQNVMLVG 674
Query: 419 QDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSKCSFQIGP 478
QD+RR GA+IV +KEE+ A K + D+S+ K +++ E+ + + S+ +GP
Sbjct: 675 QDKRRLGALIVGNKEELEAAVKEYKLAKGDSSKPIKSDRTNVIRREINRLLANSSWPVGP 734
Query: 479 IHVVDEPFTV 488
+++E FT+
Sbjct: 735 FALIEESFTI 744
>gi|168043320|ref|XP_001774133.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674540|gb|EDQ61047.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 672
Score = 486 bits (1251), Expect = e-134, Method: Compositional matrix adjust.
Identities = 239/491 (48%), Positives = 339/491 (69%), Gaps = 7/491 (1%)
Query: 1 MRFIILLWGKKSSVAP---DIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIG 57
++F++LLWG K S+ +++ P+ ++DE ++LG SR+ + S ++ +E I
Sbjct: 157 VKFVVLLWGDKQSIVSTNGSFLKDTPIHTFDEFVELGEGSRE--TSSGGYYRNILHEKIH 214
Query: 58 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERAC 117
SDD AT VYTSGTTG PK VMLTH NLLHQ+ +L+ ++ G +FL++LPPWH+YER+C
Sbjct: 215 SDDTATLVYTSGTTGKPKAVMLTHGNLLHQVINLWSVIQPSPGQRFLTILPPWHMYERSC 274
Query: 118 GYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 177
YF SRG+ +YT+V++LK+DL Y+P Y ++VPLV++ LY+G+QKQ+ ++ R+ +A
Sbjct: 275 EYFYLSRGVNHVYTSVKSLKEDLVLYKPDYFVAVPLVFDLLYNGVQKQLNAATGFRKTLA 334
Query: 178 RALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVY 237
ALI IS Y KR+ +G L +K+ A +WL A ++ +IL PLHL+ + LV+
Sbjct: 335 MALISISTKYMDAKRVAQGRDLASARKKQPIFTAAKEWLAAMVVMSILLPLHLITKLLVF 394
Query: 238 KKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 297
KKI++ + + A +SGGGSLP H+D F+E IG+ V GYGLTE+SPV++ R P N+LGS
Sbjct: 395 KKIRATLTMGTA-ISGGGSLPTHVDKFFEMIGIPVLNGYGLTETSPVLSCRLPYNNILGS 453
Query: 298 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 357
VG PI T +KIVD ETN L G KG+VK G Q+M+GY+K ATK+A+D +GW +TG
Sbjct: 454 VGIPIPGTRVKIVDPETNRQLGPGIKGLVKASGPQIMKGYYK-AKATKKAIDPEGWFDTG 512
Query: 358 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 417
D+GWIAP G +RRCGGVL+L+GRAKDTIVLSTGENVEP E+EE +SSLI+ IVV+
Sbjct: 513 DLGWIAPKMGIGCARRCGGVLILDGRAKDTIVLSTGENVEPTEIEEVMSQSSLIQNIVVL 572
Query: 418 GQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSKCSFQIG 477
GQDQRR GA++V +K+E+ AAK + +E S + + ELR + + CS +
Sbjct: 573 GQDQRRLGALVVANKDELYAAAKERMQAKGNTAEPSDADLRACIREELRTYGAGCSHSVA 632
Query: 478 PIHVVDEPFTV 488
++ EPFTV
Sbjct: 633 TFEILYEPFTV 643
>gi|147784541|emb|CAN68253.1| hypothetical protein VITISV_043922 [Vitis vinifera]
Length = 929
Score = 466 bits (1198), Expect = e-128, Method: Compositional matrix adjust.
Identities = 231/350 (66%), Positives = 273/350 (78%), Gaps = 9/350 (2%)
Query: 142 RYQPHYMISVPLVYETLYSGI--QKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCL 199
+Y H + + E L +G+ + T ++ + L + F G L
Sbjct: 559 KYTKHVEVDKHFIKEKLENGLIFMAYVLTVEQVVDILTKGLPKKQFDDL-------GKFL 611
Query: 200 TRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPM 259
++QKQ SY+ ++ DWLWA+II AILWP+H+L +KL+Y KI SAIGISKAGVSGGGSLP
Sbjct: 612 QKSQKQYSYIASIFDWLWAKIIAAILWPVHMLGKKLIYSKIHSAIGISKAGVSGGGSLPS 671
Query: 260 HIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLP 319
H+D F+EAI +KVQ GYGLTE SPV AARRPTCNVLGSVGHPI HTEIKIVD+ET+E+LP
Sbjct: 672 HVDRFFEAIDIKVQNGYGLTECSPVTAARRPTCNVLGSVGHPIRHTEIKIVDSETDELLP 731
Query: 320 AGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLV 379
GSKGIVKV+G VM+GY+KN ATK+ LDEDGWLNTGDIGWIAPHHS GRSR CGGV+V
Sbjct: 732 PGSKGIVKVKGPHVMKGYYKNELATKKVLDEDGWLNTGDIGWIAPHHSVGRSRHCGGVIV 791
Query: 380 LEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAA 439
LEGRAKDTIVLSTGENVEP ELEEAA+RS+LI+QIVVIGQDQRR GAIIVP+KEEVL AA
Sbjct: 792 LEGRAKDTIVLSTGENVEPTELEEAAMRSTLIQQIVVIGQDQRRLGAIIVPNKEEVLAAA 851
Query: 440 KRLSIVHADASELSKEKTISLLYGELRKWTSKCSFQIGPIHVVDEPFTVN 489
KR SI++A+ SELSKEK LL+ E+R WT SFQIGPI VVDEPFT++
Sbjct: 852 KRXSILNANTSELSKEKITGLLHEEIRTWTEGFSFQIGPILVVDEPFTID 901
>gi|357462837|ref|XP_003601700.1| Annotation was added to scaffolds in November
2011~Long-chain-fatty-acid CoA ligase [Medicago
truncatula]
gi|355490748|gb|AES71951.1| Annotation was added to scaffolds in November
2011~Long-chain-fatty-acid CoA ligase [Medicago
truncatula]
Length = 522
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 206/294 (70%), Positives = 246/294 (83%), Gaps = 1/294 (0%)
Query: 1 MRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDD 60
MRF+ILLWG+KS + + +E+P+F++ EI+ LGR SR+ F +S+DARKHY +E I SDD
Sbjct: 226 MRFVILLWGEKSCLVNEGSKEVPIFTFTEIMHLGRGSRRLF-ESHDARKHYVFEAIKSDD 284
Query: 61 IATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF 120
IAT VYTSGTTGNPKGVMLTH+NLLHQI+ DIVPAE GD+FLSMLPPWH YERAC YF
Sbjct: 285 IATLVYTSGTTGNPKGVMLTHQNLLHQIKFYSDIVPAEVGDRFLSMLPPWHAYERACEYF 344
Query: 121 IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARAL 180
IFS G++ +YT VRNLKDDL+RYQPHY+ISVPLVYE+LYSGIQ+QI TSS R++VA
Sbjct: 345 IFSCGVDQVYTTVRNLKDDLERYQPHYLISVPLVYESLYSGIQRQISTSSLVRKLVALTF 404
Query: 181 IRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKI 240
IR+S Y KRIYEG CLT+NQK PSYL A++DWL ARII IL+P+H+LA+KLVY KI
Sbjct: 405 IRVSLGYMECKRIYEGKCLTKNQKSPSYLYAMLDWLGARIIATILFPIHMLAKKLVYSKI 464
Query: 241 QSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNV 294
SAIG SKAG+SGGGSLP H+D F+EAIGV +Q GYGLTE+SPVIAARR +CNV
Sbjct: 465 HSAIGFSKAGISGGGSLPSHVDRFFEAIGVTLQNGYGLTETSPVIAARRLSCNV 518
>gi|414873918|tpg|DAA52475.1| TPA: hypothetical protein ZEAMMB73_557217 [Zea mays]
Length = 603
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 187/267 (70%), Positives = 222/267 (83%), Gaps = 13/267 (4%)
Query: 235 LVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNV 294
LVYKKI SAIGISKAG+SGGGSLPMH+D F+EAIG+KVQ GYGLTE+SPV+AARRP CNV
Sbjct: 310 LVYKKIHSAIGISKAGISGGGSLPMHVDKFFEAIGIKVQNGYGLTETSPVVAARRPFCNV 369
Query: 295 LGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWL 354
LG+VGHPI HTEIKI D ET EVLP GSKGIVK++G QVM+GY+KNPSAT +A D++GW
Sbjct: 370 LGTVGHPIKHTEIKIFDIETGEVLPDGSKGIVKIKGPQVMKGYYKNPSATNEAFDQEGWF 429
Query: 355 NTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQI 414
+TGD+GWI PHH+ G SR+CGG++VLEGRAKDTIVLSTGENVEP E+EEAA RS+LI QI
Sbjct: 430 STGDVGWIVPHHAMGPSRQCGGMIVLEGRAKDTIVLSTGENVEPAEIEEAASRSTLINQI 489
Query: 415 VVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKW------ 468
VVIGQDQRR GAIIVP+ +EVL AKR SI+ D EL+K+K +++LY ELR W
Sbjct: 490 VVIGQDQRRLGAIIVPNNDEVLAEAKRKSILGEDG-ELAKDKVMNMLYDELRTWRKCLII 548
Query: 469 ------TSKCSFQIGPIHVVDEPFTVN 489
T+ CSF++GPI VVDEPFT++
Sbjct: 549 LFTRFRTAHCSFRVGPILVVDEPFTID 575
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 80/136 (58%), Positives = 106/136 (77%)
Query: 2 RFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDI 61
RFI+LLWG KS + +++IP++ Y +II+LGRESR A S++ + +E+I +D+
Sbjct: 173 RFIVLLWGDKSCIDSQAIKDIPLYGYKDIIELGRESRNALFLSDEQGQQDVFESISPEDV 232
Query: 62 ATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFI 121
AT +YTSGT+G PKGVMLTH+NLLHQI +L++IVPAE GD+FLSMLP WH YERAC YFI
Sbjct: 233 ATLIYTSGTSGTPKGVMLTHRNLLHQINNLWEIVPAEPGDRFLSMLPTWHAYERACEYFI 292
Query: 122 FSRGIELMYTAVRNLK 137
FS GI+ +YT V+ LK
Sbjct: 293 FSYGIQQVYTTVKYLK 308
>gi|428778235|ref|YP_007170022.1| AMP-dependent synthetase and ligase [Halothece sp. PCC 7418]
gi|428692514|gb|AFZ45808.1| AMP-dependent synthetase and ligase [Halothece sp. PCC 7418]
Length = 636
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 216/482 (44%), Positives = 297/482 (61%), Gaps = 41/482 (8%)
Query: 20 EEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVML 79
EEIP ++ +++ G + K + DD+AT +YTSGTTG PKG ML
Sbjct: 154 EEIPTLNFSQLMAQGNQ------------KEFTLVPRKKDDLATLIYTSGTTGKPKGAML 201
Query: 80 THKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDD 139
+H N LHQ+R++ D++ + GD+ LS+LP WH YERA YF+ SRG L+YT +R+ K D
Sbjct: 202 SHGNFLHQVRAIGDVIQPQAGDRVLSILPSWHAYERAAEYFLLSRGCHLIYTNLRSFKKD 261
Query: 140 LQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCL 199
L+ +P+YM+ VP ++E++Y GIQK + + ++ + + IS Y KRI EG L
Sbjct: 262 LREQKPNYMVGVPRLWESVYDGIQKNLNQQTGNKKKLIDFFLSISNRYLKTKRISEGLDL 321
Query: 200 TRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLP 258
+PS LI L A C++L PLH L +K+VY+ ++ A G + KA +SGGG+L
Sbjct: 322 --ENLRPS----LIAKLTASSQCSVLKPLHNLGDKIVYQTVREATGGNLKAVISGGGALA 375
Query: 259 MHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVL 318
HID FYE IG+ + VGYGLTE+SPV ARR N+ GS G I TE KIVD ET + L
Sbjct: 376 KHIDDFYELIGIPLLVGYGLTETSPVTHARRLYHNLRGSSGPAIPETETKIVDPETKKSL 435
Query: 319 PAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVL 378
P G KG+V +RG+QVMQGY+K P AT +A+DE+GW NTGD+GWI P G L
Sbjct: 436 PDGEKGLVMIRGTQVMQGYYKKPEATAKAIDEEGWFNTGDLGWITPT----------GDL 485
Query: 379 VLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMA 438
VL GRAKDTIVLS GEN+EP LE A LRS I QI+V+GQDQR GA+IVP+ E +
Sbjct: 486 VLTGRAKDTIVLSNGENIEPQPLENACLRSIYIDQIMVVGQDQRCLGALIVPNVEILEQW 545
Query: 439 AKRLSIVHADASELSKEKTIS------LLYGELRKWTS-----KCSFQIGPIHVVDEPFT 487
AK ++ + D +E E+T++ L EL + + +IG ++ EPF+
Sbjct: 546 AKDHNL-NLDFAEGQLEETLANSQIQKLFRDELNREVKNRPGYRIDDRIGVFKLILEPFS 604
Query: 488 VN 489
++
Sbjct: 605 MD 606
>gi|427727828|ref|YP_007074065.1| AMP-forming long-chain acyl-CoA synthetase [Nostoc sp. PCC 7524]
gi|427363747|gb|AFY46468.1| AMP-forming long-chain acyl-CoA synthetase [Nostoc sp. PCC 7524]
Length = 658
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 214/505 (42%), Positives = 312/505 (61%), Gaps = 49/505 (9%)
Query: 1 MRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDD 60
+ F++LL S AP E + + +Y+++++LG A + +D+
Sbjct: 157 INFVVLL----SEEAPPAAETLRILNYEQLLELG------------ANHKLVKVKLAADN 200
Query: 61 IATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF 120
+AT +YTSGTTG PKGVML+H NLLHQ+++L +V + GD LS+LP WH YER+ YF
Sbjct: 201 LATLIYTSGTTGKPKGVMLSHSNLLHQVKTLGTVVQPQPGDMVLSILPTWHSYERSGEYF 260
Query: 121 IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARAL 180
+ S+G +YT +R++K DL+ ++P++MI+VP ++E++Y G+QKQ A ++ + +L
Sbjct: 261 LLSQGCTQVYTNLRSVKKDLKDFKPNFMIAVPRLWESIYEGVQKQFREQPAKKQRLIYSL 320
Query: 181 IRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKI 240
+ S Y KRI +G L V+ + L ARII + L+PLH L E+LVY K+
Sbjct: 321 LGASERYIKAKRIAQGLSLDHLH------VSSMGRLGARIIASALFPLHALGERLVYGKV 374
Query: 241 QSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVG 299
+ A G K +SGGG+LP HID F+E IGV++ GYGLTE+SPV ARRP N+ GS G
Sbjct: 375 REATGGRIKQVISGGGALPRHIDNFFEIIGVEILQGYGLTETSPVTNARRPWHNLRGSSG 434
Query: 300 HPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDI 359
PI TE+KIVD ET + L AG +G+V +RG QVMQGY++NP AT + +D +GW N+GD+
Sbjct: 435 QPIPGTEVKIVDPETRQPLAAGKRGLVLLRGPQVMQGYYQNPEATAKVIDAEGWFNSGDL 494
Query: 360 GWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQ 419
GWI P++ LVL GRAKDTIVL+ GEN+EP +E+A LRS I QI+++GQ
Sbjct: 495 GWITPYND----------LVLTGRAKDTIVLTNGENIEPQPIEDACLRSPYIDQIMLVGQ 544
Query: 420 DQRRPGAIIVPDKEEV---LMAAKRLSIVHADASELSKEKTIS--------LLYGEL-RK 467
DQR GA+IVP+ E + A R I + S +TI+ L EL R+
Sbjct: 545 DQRCIGALIVPNLEALEKWAEAQNRTLITEDNNLTSSSGETITLESKMIQDLFRQELNRE 604
Query: 468 WTSKCSF----QIGPIHVVDEPFTV 488
++ + ++GP ++ EPF++
Sbjct: 605 VQNRPGYRPDDRVGPFRLILEPFSI 629
>gi|218245215|ref|YP_002370586.1| AMP-dependent synthetase/ligase [Cyanothece sp. PCC 8801]
gi|257058247|ref|YP_003136135.1| AMP-dependent synthetase and ligase [Cyanothece sp. PCC 8802]
gi|218165693|gb|ACK64430.1| AMP-dependent synthetase and ligase [Cyanothece sp. PCC 8801]
gi|256588413|gb|ACU99299.1| AMP-dependent synthetase and ligase [Cyanothece sp. PCC 8802]
Length = 639
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 208/506 (41%), Positives = 307/506 (60%), Gaps = 49/506 (9%)
Query: 1 MRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDD 60
++ IILL S APD I ++ +++D G + A + T D
Sbjct: 136 IQLIILL----SDEAPDQEAPIKTLNFQQLMDKGSQGTLAIA------------TQTKDS 179
Query: 61 IATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF 120
+AT +YTSGTTG PKGVML+H NLLHQ+ +L ++ + GD+ LS+LP WH YER+ YF
Sbjct: 180 LATLIYTSGTTGQPKGVMLSHGNLLHQVTNLDSVIQPKPGDRVLSILPSWHSYERSAEYF 239
Query: 121 IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARAL 180
+ S+G + YT++R K DL+R++PH+M+ VP ++E+LY GIQKQ S R+ +
Sbjct: 240 LLSQGCTMTYTSIRTFKTDLKRFKPHHMVGVPRLWESLYEGIQKQFREQSPTRQKLVEFF 299
Query: 181 IRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKI 240
+ +S Y +RI + L + + + L AR+ +L PLH+L +KL+Y KI
Sbjct: 300 LNLSERYILAQRIAKNLSLEH------FHASSFERLLARLQATLLSPLHILGDKLIYGKI 353
Query: 241 QSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVG 299
+ +G + + VSGGGSL H+D+FYE + + V VGYGLTE+SPV AR + N+ GS G
Sbjct: 354 RQGVGGNFETMVSGGGSLAKHLDMFYEIVNLPVLVGYGLTETSPVTNARTHSHNIRGSSG 413
Query: 300 HPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDI 359
P+ TEI IVD + ++LP G +G+V VRGSQVMQGY+K P AT++A+D DGW +TGD+
Sbjct: 414 QPVPETEICIVDPDNRQILPQGQRGLVLVRGSQVMQGYYKKPEATRKAIDPDGWFDTGDL 473
Query: 360 GWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQ 419
GW+ P LV+ GRAKDTIVLS GEN+EP +E+A +RS I Q++V+GQ
Sbjct: 474 GWLTPMQD----------LVITGRAKDTIVLSNGENIEPQAIEDACIRSPYIDQMMVVGQ 523
Query: 420 DQRRPGAIIVPDKEEVLMAAK--RLSIVHADA---------SELSKEKTISLLYGEL-RK 467
DQ+ GA+IVP+ + ++ AK +L++ DA S+L + SL EL R+
Sbjct: 524 DQKALGALIVPNLDALVTWAKSQQLTLNLPDASASREEILHSDLYSQPVQSLFRQELSRE 583
Query: 468 WTSKCSF----QIGPIHVVDEPFTVN 489
++ + QI ++ EPF+++
Sbjct: 584 VKNRPGYRPDDQIKTFELILEPFSID 609
>gi|298490615|ref|YP_003720792.1| AMP-dependent synthetase and ligase ['Nostoc azollae' 0708]
gi|298232533|gb|ADI63669.1| AMP-dependent synthetase and ligase ['Nostoc azollae' 0708]
Length = 661
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 207/498 (41%), Positives = 306/498 (61%), Gaps = 42/498 (8%)
Query: 1 MRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDD 60
++ +ILL S P E + + ++ +++++G S + +R D
Sbjct: 166 IKLVILL----SDETPPTAENLELVNFSQLLEIG--SNHTLAPMKQSR----------DS 209
Query: 61 IATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF 120
+AT +YTSGTT PKGVML+H NLLHQ+ +L +V E+GD LS+LP WH YER+ YF
Sbjct: 210 LATLIYTSGTTAKPKGVMLSHSNLLHQVTTLGTVVQPESGDIVLSILPTWHSYERSGEYF 269
Query: 121 IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARAL 180
+ S+G +YT +R++KDDL+ ++P+Y+I+VP +E++Y G+QKQ + A ++ + + L
Sbjct: 270 LLSQGCTQVYTNLRSVKDDLKNFKPNYIIAVPRFWESIYEGVQKQFRSQPAKKQQLIKFL 329
Query: 181 IRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKI 240
+ +S Y +RI EG L + PS ++ L A+I+ L P L EKLVY K+
Sbjct: 330 LDMSQKYIQARRIAEGLSL--HHVNPSA----VERLGAKILELALLPFQTLGEKLVYAKV 383
Query: 241 QSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVG 299
+ A G K +SGGG+LP HID F+E IGV++ GYGLTE+SPV ARRP N+ GS G
Sbjct: 384 REATGDKIKQVISGGGALPQHIDNFFEIIGVEILQGYGLTETSPVTNARRPWRNLRGSSG 443
Query: 300 HPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDI 359
PI TE+KIV ET + LPAG +G+V +RG Q+MQGY++NP ATK+ +D +GW ++GD+
Sbjct: 444 QPIPGTEVKIVSPETRQPLPAGERGLVLLRGPQIMQGYYQNPEATKKVIDAEGWFDSGDL 503
Query: 360 GWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQ 419
GW+ P + LVL GRAKDTIVL+ GEN+EP +E+A LRS I QI+++GQ
Sbjct: 504 GWVTPQND----------LVLTGRAKDTIVLTNGENIEPQPIEDACLRSPYIDQIMLVGQ 553
Query: 420 DQRRPGAIIVPDKE--EVLMAAKRLSIVHADASELSKEKTI--SLLYGELRKWTS----- 470
DQR GA+IVP+ E E A + +I + ++ E + L EL +
Sbjct: 554 DQRSLGALIVPNLEALEKSAANQNDNITASSGQKIDLESKMIQDLFRQELNREVKNRPGY 613
Query: 471 KCSFQIGPIHVVDEPFTV 488
+ +IGP ++ EPF++
Sbjct: 614 RADDRIGPFQLIIEPFSI 631
>gi|119487286|ref|ZP_01621037.1| AMP-dependent synthetase and ligase [Lyngbya sp. PCC 8106]
gi|119455841|gb|EAW36976.1| AMP-dependent synthetase and ligase [Lyngbya sp. PCC 8106]
Length = 648
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 213/504 (42%), Positives = 317/504 (62%), Gaps = 45/504 (8%)
Query: 1 MRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDD 60
++FI+LL ++ + + + +PV ++ ++++ G + F+ R+ Y G D
Sbjct: 146 IKFIVLLSDEEPNSSE--IPTLPVLNFTQLLNHGGD----FT----LRRPGVY---GQDS 192
Query: 61 IATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF 120
+AT +YTSGTTG PKGVMLTH NL+HQ+ S+ D+V E GD LS+LP WH + R YF
Sbjct: 193 LATLLYTSGTTGKPKGVMLTHGNLVHQLNSIPDVVQPEIGDNVLSLLPTWHSFGRIGQYF 252
Query: 121 IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARAL 180
+ SRG +Y+++R K DL+ ++P YM SVP ++E++Y QKQ+ A+R+ +A+
Sbjct: 253 LLSRGCTQIYSSIRYFKRDLKEFKPRYMTSVPRIWESIYEAAQKQLGEQPASRQKIAKFC 312
Query: 181 IRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKI 240
+S Y +R+ +G LT + + P + + AR+ +L PLH LA+KLVY+KI
Sbjct: 313 FSLSEQYVLARRVVQG--LTLDGQSPGGMQKAM----ARLKMLLLTPLHQLADKLVYQKI 366
Query: 241 QSAIG-ISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVG 299
++A G + K +SGGGSL MH++ FYE +GV + VGYGLTE+SPV+ ARRP N+ GS G
Sbjct: 367 RAATGGMFKFAISGGGSLAMHLETFYEIVGVDLLVGYGLTETSPVLTARRPKHNLRGSAG 426
Query: 300 HPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDI 359
PI TEI+IVD ET VLP KG+V RG Q+M+GYF+NP AT +A+D +GW NTGDI
Sbjct: 427 KPIPQTEIRIVDLETGRVLPRLEKGLVLARGPQIMKGYFENPEATAKAIDPEGWFNTGDI 486
Query: 360 GWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQ 419
GW++ + LVL GRAKDTIVLS GEN+EP +E+A +RS I Q++++GQ
Sbjct: 487 GWLSRQND----------LVLTGRAKDTIVLSNGENIEPQPIEDACVRSPYIDQMILVGQ 536
Query: 420 DQRRPGAIIVPDKE--EVLMAAKRL--------SIVHADASELSKEKTISLLYGEL-RKW 468
DQ+ GA+IVP+ E E ++ L S+ ++ +L + +L EL R+
Sbjct: 537 DQKVLGALIVPNFEGLEKWAVSQNLKLKLPHSESVNDSEGLDLESQPVQNLFRQELNREV 596
Query: 469 TSKCSF----QIGPIHVVDEPFTV 488
++ S+ +IGP ++ EPFT+
Sbjct: 597 KNRPSYRVDDRIGPFRLILEPFTM 620
>gi|428780585|ref|YP_007172371.1| AMP-forming long-chain acyl-CoA synthetase [Dactylococcopsis salina
PCC 8305]
gi|428694864|gb|AFZ51014.1| AMP-forming long-chain acyl-CoA synthetase [Dactylococcopsis salina
PCC 8305]
Length = 636
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 200/434 (46%), Positives = 274/434 (63%), Gaps = 34/434 (7%)
Query: 1 MRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDD 60
+ F+ILL + +A I VF++ +II+LG E +F +D
Sbjct: 140 IEFVILLSDETVEIAG-----IKVFNFSQIIELGTEQELSFVPRE------------IND 182
Query: 61 IATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF 120
+AT +YTSGTTG PKG ML+H N LHQ+R+L D++ + GD+ LS+LP WH YERA YF
Sbjct: 183 LATLIYTSGTTGKPKGAMLSHGNFLHQVRTLGDVIQPQAGDRVLSILPSWHAYERAAEYF 242
Query: 121 IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARAL 180
+ +RG ++ YT +R K DL+ +P+YM+ VP ++E++Y GIQK + + ++ +
Sbjct: 243 LLARGCQITYTNLRAFKKDLKEQKPNYMVGVPRLWESVYDGIQKTLNQQTGTKKKLVNFF 302
Query: 181 IRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKI 240
+ IS Y KRI E CL ++ ++ + L A + ++L PLH L +K+VY +
Sbjct: 303 LNISDRYIKAKRINERLCLE------NFNPSVTEKLTASVQQSLLEPLHNLGDKVVYNTV 356
Query: 241 QSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVG 299
+ A G + KA +SGGGSL +ID FYE +G+ + VGYGLTE+SPV ARR N+ GS G
Sbjct: 357 REATGGNLKAVISGGGSLAKYIDDFYEVVGIPLLVGYGLTETSPVTHARRLYHNLRGSAG 416
Query: 300 HPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDI 359
I TE KIVD ET L G KG+V +RG+QVMQGY+K P AT +A+D++GW NTGD+
Sbjct: 417 QAIPETETKIVDPETKASLNDGEKGLVMIRGTQVMQGYYKQPEATAKAIDQEGWFNTGDL 476
Query: 360 GWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQ 419
GWI P G LVL GRAKDTIVLS GEN+EP LE+A LRS I QI+V+GQ
Sbjct: 477 GWITPT----------GDLVLTGRAKDTIVLSNGENIEPQPLEDACLRSVYIDQIIVLGQ 526
Query: 420 DQRRPGAIIVPDKE 433
DQR GA+IVP+ E
Sbjct: 527 DQRCLGALIVPNVE 540
>gi|422302727|ref|ZP_16390086.1| Long-chain-fatty-acid CoA ligase [Microcystis aeruginosa PCC 9806]
gi|389787971|emb|CCI16697.1| Long-chain-fatty-acid CoA ligase [Microcystis aeruginosa PCC 9806]
Length = 639
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 203/450 (45%), Positives = 277/450 (61%), Gaps = 33/450 (7%)
Query: 55 TIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYE 114
T +D+AT +YTSGTTG PKGVML+H NLLHQ+R+L I E GD+ LS+LP WH YE
Sbjct: 175 TKSENDLATLIYTSGTTGQPKGVMLSHGNLLHQVRNLNAIFQPEPGDRVLSILPSWHSYE 234
Query: 115 RACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARR 174
R+C YFI ++G +YT++R K DL+++ P M+ VP ++E+LY GIQKQ SA ++
Sbjct: 235 RSCEYFILAQGCTQIYTSIRTFKQDLKQFSPQLMVGVPRLWESLYEGIQKQFSEQSATKQ 294
Query: 175 VVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEK 234
+ R L+ S Y KRI + L P + L ARI +L+PLH + +K
Sbjct: 295 KLVRFLLEKSEKYVIAKRIADNLSLDHLHASPG------ERLKARIQSLLLYPLHAIGDK 348
Query: 235 LVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCN 293
LVY KI+ A+G K VSGGGSL H+D FYE G+ + VGYGLTE+SPV RR N
Sbjct: 349 LVYGKIRQAVGNKVKILVSGGGSLARHLDTFYEIAGIPILVGYGLTETSPVATVRRIDHN 408
Query: 294 VLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGW 353
+ GS G P+ TEI IVD ++ EVLP G+V +RG QVMQGY+K P AT++A+ DGW
Sbjct: 409 LRGSAGRPVFQTEICIVDLQSKEVLPTEKHGLVLIRGPQVMQGYYKKPEATEKAISPDGW 468
Query: 354 LNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQ 413
++GDIGW+ G LVL GRAKDTIVLS GEN+EP +E+A LRS I Q
Sbjct: 469 FDSGDIGWLT----------AAGDLVLTGRAKDTIVLSNGENIEPQPIEDACLRSPFISQ 518
Query: 414 IVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI------VHAD-----ASELSKEKTISLLY 462
I+++GQDQ+ GA+IVP+ + + A+ I H+D +S+L +K ++L
Sbjct: 519 IMLVGQDQKALGALIVPNLDILANWAQEQKISLNLPDSHSDRSTILSSDLYSKKVLALYQ 578
Query: 463 GELRKWTS-----KCSFQIGPIHVVDEPFT 487
EL++ + QI ++ EPF+
Sbjct: 579 QELKREVRNRPGYRADDQIKTFELILEPFS 608
>gi|434387011|ref|YP_007097622.1| AMP-forming long-chain acyl-CoA synthetase [Chamaesiphon minutus
PCC 6605]
gi|428018001|gb|AFY94095.1| AMP-forming long-chain acyl-CoA synthetase [Chamaesiphon minutus
PCC 6605]
Length = 665
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 210/519 (40%), Positives = 305/519 (58%), Gaps = 70/519 (13%)
Query: 1 MRFIILLWGKKSSVAPDIVEEIPV--FSYDEIIDLGRESRKAFSDSNDARKHYKYETIGS 58
++ IILL + + V E+P+ ++ + IDLGR + ++ TI
Sbjct: 156 IKLIILLCDETTDV------ELPIKLLNFSQTIDLGRSA------------QFQPATIAK 197
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 118
D+AT +YTSGT+GNPKGVMLTH NLLHQI + ++PA G + LS+LP WH YER+C
Sbjct: 198 TDLATLIYTSGTSGNPKGVMLTHANLLHQINTCGTVIPATPGSRVLSILPSWHSYERSCE 257
Query: 119 YFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 178
Y++ S+G YT +R K DL+ YQP Y+++VP + E++Y GIQKQ ++ +
Sbjct: 258 YYLLSQGCTQTYTNIRYFKQDLKEYQPEYLVAVPRLSESIYEGIQKQFREQPPNKQKLVA 317
Query: 179 ALIRISFAYTAFKRIYEGFCL-----TRNQKQPSYLVALIDWLWARIICAILWPLHLLAE 233
L+ +S Y +RI +G L T QK L AR+ AIL P+H +A+
Sbjct: 318 RLLALSTKYIEARRIVQGLSLECLNPTLGQK-----------LIARLQMAILAPIHAIAD 366
Query: 234 KLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTC 292
KL+Y KI++A G + +SGGGSL H+DLF+E IGV + VGYGLTE++P+ RRP
Sbjct: 367 KLIYSKIRAATGGKIRYIISGGGSLAKHLDLFFEIIGVNILVGYGLTETAPITNVRRPWQ 426
Query: 293 NVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDG 352
N+ S G P+ TEI+IVD +T + + G KG+V +RG QVMQGY+++P AT +A+D DG
Sbjct: 427 NLRLSSGQPLPGTEIRIVDVDTRQPVAIGQKGLVMIRGPQVMQGYYRDPEATAKAIDVDG 486
Query: 353 WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIR 412
W N+GD+G + P++ L + GRAKDTIVLS GEN+EP +E+A LRSS I
Sbjct: 487 WFNSGDLGMLTPNND----------LTITGRAKDTIVLSNGENIEPTPIEDACLRSSYIS 536
Query: 413 QIVVIGQDQRRPGAIIVPDKEEV--------LMAAKRLSIVHADASE----------LSK 454
QIV++GQDQ+ GA+IVP+ E + L+ A + A ++E L+
Sbjct: 537 QIVLVGQDQKALGALIVPNSEALHQWAISQNLIPAPIAATNPASSNEPNILLDNPQILNN 596
Query: 455 EKTISLLYGELRKWTS-----KCSFQIGPIHVVDEPFTV 488
+ I L EL + + +I I ++ EPF++
Sbjct: 597 TQVIDLFRDELNREVKNRPGYRIDDRIATIKLIAEPFSI 635
>gi|414079435|ref|YP_007000859.1| AMP-dependent synthetase and ligase [Anabaena sp. 90]
gi|413972714|gb|AFW96802.1| AMP-dependent synthetase and ligase [Anabaena sp. 90]
Length = 654
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 206/496 (41%), Positives = 311/496 (62%), Gaps = 44/496 (8%)
Query: 1 MRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDD 60
++ ++LL S AP PV ++ +++D+G SN+ K S+
Sbjct: 165 IKLVVLL----SDEAPPTERNFPVVNFSQLLDIG---------SNNTLIATKQ---SSES 208
Query: 61 IATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF 120
+AT +YTSGTTG PKGVML+HKNLLHQ++SL +V + GD LS+LP WH YER+ YF
Sbjct: 209 LATLIYTSGTTGKPKGVMLSHKNLLHQVKSLGVVVQPKKGDTVLSILPTWHSYERSGEYF 268
Query: 121 IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARAL 180
+ S+G +YT +R++K DL++++P+YMI+VP ++E++Y G+QKQ A ++ + + L
Sbjct: 269 LLSQGCTQIYTNLRSVKGDLKKFKPNYMIAVPRLWESIYEGVQKQFREQPAKKQSLVKFL 328
Query: 181 IRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKI 240
+ S Y +RI +G L N S+ I+ A+I L H L EKLVY K+
Sbjct: 329 LETSQKYIEARRICQGLSL--NHIHASF----IERSQAKITELGLLLFHALGEKLVYTKV 382
Query: 241 QSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVG 299
+ A G + K +SGGG+LP +ID F+E +GV++ GYGLTE+SPV ARRP N+ GS G
Sbjct: 383 REATGGNIKHVISGGGALPAYIDNFFEIVGVEILQGYGLTETSPVTNARRPWRNLRGSSG 442
Query: 300 HPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDI 359
PI TE+KIV+ ET + LP G +G+V ++G Q+MQGY++NP AT +A+D +GW ++GD+
Sbjct: 443 QPIPGTEVKIVNPETRQPLPVGERGLVLLKGPQIMQGYYQNPEATTKAIDTEGWFDSGDL 502
Query: 360 GWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQ 419
GW+ P + LVL GRAKDTIVL+ GEN+EP +E+A LRS I QI+++GQ
Sbjct: 503 GWVTPEND----------LVLTGRAKDTIVLTNGENIEPQPIEDACLRSPYIDQIMLVGQ 552
Query: 420 DQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTI--SLLYGEL-RKWTSKCSF-- 474
DQR GA+IVP+ L A ++ + ++ ++ E I L EL R+ ++ S+
Sbjct: 553 DQRSIGALIVPN----LEALEKWAETQNNSQKIDLESKIVQDLFRQELNREVQNRPSYRA 608
Query: 475 --QIGPIHVVDEPFTV 488
++GP +++E F++
Sbjct: 609 DDRVGPFKLIEEEFSI 624
>gi|443327638|ref|ZP_21056258.1| AMP-forming long-chain acyl-CoA synthetase [Xenococcus sp. PCC
7305]
gi|442792730|gb|ELS02197.1| AMP-forming long-chain acyl-CoA synthetase [Xenococcus sp. PCC
7305]
Length = 640
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 201/438 (45%), Positives = 275/438 (62%), Gaps = 37/438 (8%)
Query: 1 MRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDD 60
++FIILL EEIP S +I++ FS + ++ + D
Sbjct: 138 LKFIILLSD----------EEIPTSSSTKILN--------FSQLLELGSNHSLAKVTQDK 179
Query: 61 --IATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 118
+AT +YTSGTTG PKGVML+H NLLHQ+ +L I+ E GD+ LS+LP WH YER+
Sbjct: 180 STLATLIYTSGTTGKPKGVMLSHGNLLHQVNNLRQIILCEQGDRVLSILPSWHAYERSAE 239
Query: 119 YFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 178
Y++ S+G YT +R+LK DL+ YQPHYMI VP ++E+LY G+QKQ + ++ +
Sbjct: 240 YYLLSQGCTQYYTNLRSLKSDLKTYQPHYMIGVPRLWESLYEGVQKQFREQAPTKQKLIN 299
Query: 179 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 238
+S Y +R+ G L + QPS + L +A + L PLHLL +K+VY+
Sbjct: 300 WFFNLSQKYVMARRLSRGLDL--DNLQPSAIAKL----FATLQTFALLPLHLLGDKIVYQ 353
Query: 239 KIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 297
K++ A+G K VSGGGSL H+D FYE + + V VGYGLTE++PV AR N +
Sbjct: 354 KVRDAVGGKVKTFVSGGGSLAKHLDDFYELVNIPVLVGYGLTETAPVTNARTLDRNFSKT 413
Query: 298 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 357
G PI TEIKIV+ ET E LP G+KG+V +RGSQVMQGY+KNP AT +A+D +GW ++G
Sbjct: 414 SGQPIAETEIKIVNPETKEALPTGAKGLVLIRGSQVMQGYYKNPEATAKAIDAEGWFDSG 473
Query: 358 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 417
D+GW+ P + LVL GRAKDTIVL+ GEN+EP +E+A +RSS I QI+++
Sbjct: 474 DLGWVTPDND----------LVLTGRAKDTIVLTNGENIEPQPIEDACIRSSYIDQIMLV 523
Query: 418 GQDQRRPGAIIVPDKEEV 435
GQDQR GA+IVP+ E V
Sbjct: 524 GQDQRALGALIVPNLETV 541
>gi|434393957|ref|YP_007128904.1| Long-chain-fatty-acid--CoA ligase [Gloeocapsa sp. PCC 7428]
gi|428265798|gb|AFZ31744.1| Long-chain-fatty-acid--CoA ligase [Gloeocapsa sp. PCC 7428]
Length = 655
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 193/438 (44%), Positives = 281/438 (64%), Gaps = 24/438 (5%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 118
+ +AT +YTSGTTG PKGVMLTH NLLHQ+ L IV + GD+ LS+LP WHVYER C
Sbjct: 205 ETLATLMYTSGTTGKPKGVMLTHGNLLHQVEMLGCIVQPKEGDRVLSILPTWHVYERTCE 264
Query: 119 YFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 178
YF+ S+G +YT +R +K D++ ++P+YM+ VP ++E++Y G++KQ A ++ +
Sbjct: 265 YFLLSQGCTQIYTNIRQVKKDIREFKPNYMVGVPRLWESIYEGVKKQFREQPANKQQLID 324
Query: 179 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 238
+ S + +RI G L N PS L + L A + L P+H L EK+VY+
Sbjct: 325 FFLTKSQQFIEARRIVHGLSL--NSLNPS----LSERLSASVQATALAPIHALGEKIVYR 378
Query: 239 KIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 297
K++ A G K +SGGGSL MH++ F+E +GV+V VGYGLTE+SPV ARRP N+ GS
Sbjct: 379 KVREATGGQLKQVISGGGSLAMHLENFFEIVGVEVLVGYGLTETSPVTNARRPWRNLRGS 438
Query: 298 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 357
G P+ T+++IVD ET + LP G +G+V VRG Q+MQGY++NP AT +A+D +GW +TG
Sbjct: 439 AGQPLPGTQVRIVDPETRQPLPQGERGLVMVRGPQIMQGYYQNPEATAKAIDSEGWFDTG 498
Query: 358 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 417
D+GW+ P + LV+ GRAKDTIVL+ GEN+EP +E+A LRS I QI+++
Sbjct: 499 DLGWLTPEND----------LVITGRAKDTIVLTNGENIEPQPIEDACLRSPYIDQIMLV 548
Query: 418 GQDQRRPGAIIVPDKE--EVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTS----- 470
GQDQ+ GA+IVP+ E E A++ + + ++L+ + +L EL +
Sbjct: 549 GQDQKSLGALIVPNLEALEQWAASQNIELKVDSPTDLNSKTIQNLFRQELNREVKNRPGY 608
Query: 471 KCSFQIGPIHVVDEPFTV 488
+ +IGP +V EPF++
Sbjct: 609 RPDDRIGPFELVLEPFSM 626
>gi|390440993|ref|ZP_10229181.1| Long-chain-fatty-acid CoA ligase [Microcystis sp. T1-4]
gi|389835698|emb|CCI33307.1| Long-chain-fatty-acid CoA ligase [Microcystis sp. T1-4]
Length = 639
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 202/450 (44%), Positives = 276/450 (61%), Gaps = 33/450 (7%)
Query: 55 TIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYE 114
T +D+AT +YTSGTTG PKGVML+H NLLHQ+R+L I E GD+ LS+LP WH YE
Sbjct: 175 TKSENDLATLIYTSGTTGQPKGVMLSHGNLLHQVRNLNAIFQPEPGDRVLSILPSWHSYE 234
Query: 115 RACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARR 174
R+C YF ++G +YT++R K DL+++ P M+ VP ++E+LY GIQKQ SA ++
Sbjct: 235 RSCEYFSLAQGCTQIYTSIRTFKQDLKQFSPQLMVGVPRLWESLYEGIQKQFSEQSATKQ 294
Query: 175 VVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEK 234
+ R L+ S Y KRI + L P + L ARI +L+PLH + +K
Sbjct: 295 KLVRFLLEKSEKYVIAKRIADNLSLDHLHASPG------ERLKARIQSLLLYPLHAIGDK 348
Query: 235 LVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCN 293
LVY KI+ A+G K VSGGGSL H+D FYE G+ + VGYGLTE+SPV RR N
Sbjct: 349 LVYGKIRQAVGNKVKILVSGGGSLARHLDTFYEIAGIPILVGYGLTETSPVATVRRIDHN 408
Query: 294 VLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGW 353
+ GS G P+ TEI IVD + EVLP G+V +RG QVMQGY+K P AT++A+ DGW
Sbjct: 409 LRGSAGRPVFQTEICIVDLHSKEVLPTEKHGLVLIRGPQVMQGYYKKPEATEKAISPDGW 468
Query: 354 LNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQ 413
++GDIGW+ G LVL GRAKDTIVLS GEN+EP +E+A LRS I Q
Sbjct: 469 FDSGDIGWLT----------AAGDLVLTGRAKDTIVLSNGENIEPQPIEDACLRSPFISQ 518
Query: 414 IVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI------VHAD-----ASELSKEKTISLLY 462
I+++GQDQ+ GA+IVP+ + + A+ I +H+D +S+L +K ++L
Sbjct: 519 IMLVGQDQKALGALIVPNLDILANWAQEQKISLNLPDLHSDRSTILSSDLYSKKVLALYQ 578
Query: 463 GELRKWTS-----KCSFQIGPIHVVDEPFT 487
EL++ + QI ++ EPF+
Sbjct: 579 QELKREVRNRPGYRTDDQIKTFELILEPFS 608
>gi|443647067|ref|ZP_21129585.1| AMP-binding enzyme family protein [Microcystis aeruginosa
DIANCHI905]
gi|159030818|emb|CAO88497.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
gi|443335613|gb|ELS50079.1| AMP-binding enzyme family protein [Microcystis aeruginosa
DIANCHI905]
Length = 639
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 203/451 (45%), Positives = 281/451 (62%), Gaps = 33/451 (7%)
Query: 55 TIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYE 114
T G +D+AT +YTSGTTG PKGVML+H NLLHQ+R+L I + GD+ LS+LP WH YE
Sbjct: 175 TKGENDLATLIYTSGTTGQPKGVMLSHGNLLHQVRNLNAIFQPDPGDRVLSILPSWHSYE 234
Query: 115 RACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARR 174
R+C YF ++G +YT++R K DL+++ P M+ VP ++E+LY GIQKQ SA ++
Sbjct: 235 RSCEYFSLAQGCTQIYTSIRTFKQDLKQFSPQLMVGVPRLWESLYEGIQKQFSEQSATKQ 294
Query: 175 VVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEK 234
+ R L+ S Y KRI + L + I+ L ARI +L+PLH + +K
Sbjct: 295 KLVRFLLEKSEKYVIAKRIADNLSLDHLH------ASGIERLKARIQSLLLYPLHAIGDK 348
Query: 235 LVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCN 293
LVY KI+ A+G K VSGGGSL H+D FYE G+ + VGYGLTE+SPV RR N
Sbjct: 349 LVYSKIRQAVGNKVKILVSGGGSLARHLDTFYEIAGIPILVGYGLTETSPVATVRRIDHN 408
Query: 294 VLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGW 353
+ GS G P+ TEI IVD + EVLP G+V +RG QVMQGY+K P AT++A+ DGW
Sbjct: 409 LRGSAGRPVFQTEICIVDLHSKEVLPTEKHGLVLIRGPQVMQGYYKKPEATEKAISPDGW 468
Query: 354 LNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQ 413
++GDIGW+ G LVL GRAKDTIVLS GEN+EP +E+A LRS I Q
Sbjct: 469 FDSGDIGWLT----------AAGDLVLTGRAKDTIVLSNGENIEPQPIEDACLRSPFISQ 518
Query: 414 IVVIGQDQRRPGAIIVPDKEEVLMAA--KRLSI----VHAD-----ASELSKEKTISLLY 462
I+++GQDQ+ GA+IVP+ + + A ++LS+ H+D +S+L +K ++L
Sbjct: 519 IMLVGQDQKALGALIVPNLDILANWAHEQKLSLNLPDAHSDRSTILSSDLYSKKVLALYQ 578
Query: 463 GELRKWTS-----KCSFQIGPIHVVDEPFTV 488
EL++ + QI ++ EPF++
Sbjct: 579 QELKREVRNRPGYRTDDQIKTFELILEPFSL 609
>gi|443321847|ref|ZP_21050887.1| AMP-forming long-chain acyl-CoA synthetase [Gloeocapsa sp. PCC
73106]
gi|442788463|gb|ELR98156.1| AMP-forming long-chain acyl-CoA synthetase [Gloeocapsa sp. PCC
73106]
Length = 633
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 204/480 (42%), Positives = 288/480 (60%), Gaps = 38/480 (7%)
Query: 20 EEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVML 79
E + V ++ ++++LG +S N A +AT +YTSGTTG PKGVML
Sbjct: 154 ESLKVLNFSQLMELGSQSTLTPVSRNRA------------SLATLIYTSGTTGKPKGVML 201
Query: 80 THKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDD 139
+H NLLHQ+ +L I+ E GDK LS+LP WH YERA Y+I S+G +YT +RN K D
Sbjct: 202 SHGNLLHQVNNLNTIIQPEPGDKVLSILPSWHSYERAAEYYILSQGCTQIYTNIRNFKQD 261
Query: 140 LQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCL 199
LQ++QP++MI VP ++E++Y GIQKQ+ R+ + + + IS +Y +RI +G L
Sbjct: 262 LQKHQPNFMIGVPRLWESIYEGIQKQLREQPQKRQKLVKTCLEISESYILARRIAQGLSL 321
Query: 200 TRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLP 258
+ S D L A I L PLH +A++LVY+KI++ +G + + +SGGGSL
Sbjct: 322 EHLEANWS------DRLKAGIKATALAPLHQIADRLVYRKIRNGVGGNLRFLISGGGSLA 375
Query: 259 MHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVL 318
MH++ FYE +G+ + VGYGLTE+SPV AR+ N+ GS G P+ TEI+IVD ET + L
Sbjct: 376 MHLENFYEVVGIPILVGYGLTETSPVTNARQIEHNLRGSAGKPLPETEIRIVDLETKQDL 435
Query: 319 PAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVL 378
P +G+V +RG QVMQGY+ P AT +A+D GW +TGDIGW+ C L
Sbjct: 436 PKKKRGLVLLRGPQVMQGYYHQPEATAKAIDASGWFDTGDIGWLT----------CDQDL 485
Query: 379 VLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV--- 435
VL GRAKDTIVL+ GEN+EP +E+A LRS I QI+++GQDQR GA+IVP+ E +
Sbjct: 486 VLTGRAKDTIVLTNGENIEPQPIEDACLRSPYIEQIMLVGQDQRALGALIVPNLEALQQW 545
Query: 436 -LMAAKRLSIVHADASELSKEKTISLLYGELRKWTS-----KCSFQIGPIHVVDEPFTVN 489
+ + L L+ T L EL + + +IG V EPF+++
Sbjct: 546 AIASGLNLDFSTPGTQALNDAATQELFRRELNREVQNRPGYRSDDRIGAFAFVLEPFSLD 605
>gi|425470138|ref|ZP_18849008.1| Genome sequencing data, contig C328 [Microcystis aeruginosa PCC
9701]
gi|389884320|emb|CCI35368.1| Genome sequencing data, contig C328 [Microcystis aeruginosa PCC
9701]
Length = 639
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 204/459 (44%), Positives = 282/459 (61%), Gaps = 33/459 (7%)
Query: 47 ARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSM 106
A K T +D+AT +YTSGTTG PKGVML+H NLLHQ+R+L I + GD+ LS+
Sbjct: 167 AENTLKPITKSENDLATLIYTSGTTGQPKGVMLSHGNLLHQVRNLNAIFQPDPGDRVLSI 226
Query: 107 LPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQI 166
LP WH YER+C YF ++G +YT++R K DL+++ P M+ VP ++E+LY GIQKQ
Sbjct: 227 LPSWHSYERSCEYFSLAQGCTQIYTSIRTFKQDLKQFSPQLMVGVPRLWESLYEGIQKQF 286
Query: 167 FTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILW 226
SA ++ + R L+ S Y KRI + L P + L ARI +L+
Sbjct: 287 SEQSATKQKLVRFLLEKSEKYVIAKRIADNLSLDHLHASPG------ERLKARIQSLLLY 340
Query: 227 PLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVI 285
PLH + +KLVY KI+ A+G K VSGGGSL H+D FYE G+ + VGYGLTE+SPV
Sbjct: 341 PLHAIGDKLVYGKIRQAVGNKVKILVSGGGSLARHLDTFYEIAGIPILVGYGLTETSPVA 400
Query: 286 AARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATK 345
RR N+ GS G P+ TEI IVD ++ EVLP G+V +RG QVMQGY+K P AT+
Sbjct: 401 TVRRIDHNLRGSAGRPVFQTEICIVDLQSKEVLPTEKHGLVLIRGPQVMQGYYKKPEATE 460
Query: 346 QALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAA 405
+A+ DGW ++GDIGW+ G LVL GRAKDTIVLS GEN+EP +E+A
Sbjct: 461 KAISPDGWFDSGDIGWLT----------AAGDLVLTGRAKDTIVLSNGENIEPQPIEDAC 510
Query: 406 LRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAA--KRLSI----VHAD-----ASELSK 454
LRS I QI+++GQDQ+ GA+IVP+ + + A ++LS+ H+D +S+L
Sbjct: 511 LRSPFISQIMLVGQDQKALGALIVPNLDILANWAQEQKLSLNLPDAHSDRSTILSSDLYS 570
Query: 455 EKTISLLYGELRKWTS-----KCSFQIGPIHVVDEPFTV 488
+K ++L EL++ + QI ++ EPF++
Sbjct: 571 KKVLALYQQELKREVRNRPGYRTDDQIKTFELILEPFSL 609
>gi|428311361|ref|YP_007122338.1| AMP-forming long-chain acyl-CoA synthetase [Microcoleus sp. PCC
7113]
gi|428252973|gb|AFZ18932.1| AMP-forming long-chain acyl-CoA synthetase [Microcoleus sp. PCC
7113]
Length = 672
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 203/453 (44%), Positives = 287/453 (63%), Gaps = 39/453 (8%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 118
D +AT +YTSGTTG PKGVMLTH NLLHQ+ ++ + E GDK LS+LP WH YERA
Sbjct: 207 DTLATLLYTSGTTGKPKGVMLTHGNLLHQVVNIGSVWLPEPGDKVLSILPSWHAYERAVE 266
Query: 119 YFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 178
YFI S+G +YT +RN+K DL+ ++P M+ VP ++E++Y G+QKQ A ++ + +
Sbjct: 267 YFILSQGCTQIYTNLRNVKKDLREFKPQLMVGVPRLWESIYEGVQKQFREQPANKQRLVQ 326
Query: 179 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 238
+ +S Y +R+ +G L QPS I+ L AR+ +LWP+H LA K+VY+
Sbjct: 327 NFLNVSKRYIEARRLAQGLSL--GNLQPSA----IERLKARVQATVLWPVHQLANKIVYQ 380
Query: 239 KIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 297
K++ A G K +SGGGSL H+D F+E IGV+V VGYGLTE+SPV RRP N+ S
Sbjct: 381 KVREATGGQIKIVISGGGSLARHLDDFFEIIGVEVLVGYGLTETSPVTNVRRPWRNLRYS 440
Query: 298 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 357
G P+ TEI+IV+ ET ++LP G +G+V VRG QVMQGY+K P AT +A+D DGW +TG
Sbjct: 441 SGPPMPGTEIRIVNPETRQLLPQGQQGLVMVRGPQVMQGYYKKPEATAKAIDADGWFDTG 500
Query: 358 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 417
D+GW+ P + LVL GRAKDTIVL+ GEN+EP +E+A +RS+ I QI+++
Sbjct: 501 DLGWVTPENH----------LVLTGRAKDTIVLTNGENIEPQPIEDACIRSAYIDQIMLV 550
Query: 418 GQDQRRPGAIIVPDKEEVLM--AAKRLSIVHADAS---------------ELSKEKTISL 460
GQDQR GA+IVP+ E + AA+ L++ DA +L ++ SL
Sbjct: 551 GQDQRSLGALIVPNLEALQQWAAAQNLNLRLPDAVSPQSAAPPEEFRTAIDLQSKEVQSL 610
Query: 461 LYGEL-RKWTSKCSF----QIGPIHVVDEPFTV 488
EL R+ ++ + +IG ++ EPF++
Sbjct: 611 FRSELNREVKNRPGYRPDDRIGSFELILEPFSL 643
>gi|428320800|ref|YP_007118682.1| Long-chain-fatty-acid--CoA ligase [Oscillatoria nigro-viridis PCC
7112]
gi|428244480|gb|AFZ10266.1| Long-chain-fatty-acid--CoA ligase [Oscillatoria nigro-viridis PCC
7112]
Length = 649
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 198/436 (45%), Positives = 271/436 (62%), Gaps = 27/436 (6%)
Query: 61 IATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF 120
+AT +YTSGTTG PKGVMLTH NLLHQ+ + I+ E G+ LS+LP WH YER YF
Sbjct: 205 LATLLYTSGTTGKPKGVMLTHGNLLHQVTTFGTILQPEIGESALSILPSWHAYERTVEYF 264
Query: 121 IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARAL 180
+ S+G +YT++R K D + Y+P YMISVP ++E++Y +QKQ A ++ + L
Sbjct: 265 LLSQGCTQIYTSIRYFKQDFKAYKPQYMISVPRIWESIYEAVQKQFREQPANKQKLVNFL 324
Query: 181 IRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKI 240
+ S Y +RI++G L+ S + L ARI +LWP+H LAEKLVY+K+
Sbjct: 325 LSASQQYIENRRIFQGLTLSLKPASAS------EKLIARIKSILLWPVHALAEKLVYQKV 378
Query: 241 QSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVG 299
+ A G K +SGGGSL H+D F+E + + VGYGLTE+SPV+ RRP N+ GS G
Sbjct: 379 REATGGRFKWAISGGGSLATHLDNFFEIANIGLLVGYGLTETSPVLTVRRPWHNLKGSAG 438
Query: 300 HPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDI 359
PI TEIKIVD ET + LPAG +G+V RG Q+MQGY+ NP AT + +D +GW +TGD+
Sbjct: 439 QPIAQTEIKIVDPETRQQLPAGQRGLVLARGPQIMQGYYLNPQATAKVIDPEGWFDTGDL 498
Query: 360 GWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQ 419
GW+ P G L+L GRAKDTIVLS GEN+EP +E+A +RS I QI+++GQ
Sbjct: 499 GWLTP----------GNDLILTGRAKDTIVLSNGENIEPQPIEDACVRSPYIDQIMLVGQ 548
Query: 420 DQRRPGAIIVPDKEEVLMAAKRLSIVHADASELS-KEKTISLLY-GELRKWTS-----KC 472
DQ+ GA+IVP+ E V K + E+ KTI L+ EL + +
Sbjct: 549 DQKSVGALIVPNAEAV---QKWAETQNPPLHEIDWNSKTIQDLFRKELNREVQNRPGYRA 605
Query: 473 SFQIGPIHVVDEPFTV 488
+IGP ++ EPF++
Sbjct: 606 DDRIGPFRLIQEPFSI 621
>gi|427707121|ref|YP_007049498.1| long-chain-fatty-acid--CoA ligase [Nostoc sp. PCC 7107]
gi|427359626|gb|AFY42348.1| Long-chain-fatty-acid--CoA ligase [Nostoc sp. PCC 7107]
Length = 656
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 199/445 (44%), Positives = 283/445 (63%), Gaps = 31/445 (6%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 118
D +AT +YTSGTTG PKGVML+H NL+HQ+RSL IV E GD LS+LP WH YER+
Sbjct: 199 DSLATLIYTSGTTGKPKGVMLSHSNLMHQVRSLRAIVQPEPGDIVLSILPSWHSYERSGE 258
Query: 119 YFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 178
YF+ S+G +YT +R++K DL+ ++P++MI+VP ++E++Y G+QKQ A+++ +
Sbjct: 259 YFLLSQGCSQIYTNLRSVKRDLKEFKPNFMIAVPRLWESIYEGVQKQFREQPASKQRLIN 318
Query: 179 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 238
L+ +S Y +RI +G CL + I+ + A+I L PLH+L EK+VY
Sbjct: 319 FLVGMSEKYIKAQRIAQGLCLEHVN------ASAIERIGAKIQALALLPLHILGEKIVYA 372
Query: 239 KIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 297
K++ A G K +SGGG+LP HID F+E IGV + GYGLTE+SPV ARRP N GS
Sbjct: 373 KVREATGGRIKHVISGGGALPRHIDNFFEIIGVDILQGYGLTETSPVTNARRPWRNFRGS 432
Query: 298 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 357
G PI TE+KIVD E + L G +G+V ++G Q+MQGY++NP AT +A+D +GW ++G
Sbjct: 433 SGQPIPGTEVKIVDPENRQPLAKGQRGLVLLKGPQIMQGYYQNPEATAKAIDAEGWFDSG 492
Query: 358 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 417
D+GW+ P + LVL GRAKDTIVL+ GEN+EP +E+A LRS I QI+++
Sbjct: 493 DLGWVTPEND----------LVLTGRAKDTIVLTNGENIEPQPIEDACLRSPYIDQIMLV 542
Query: 418 GQDQRRPGAIIVPDKEEVLMAAKRLSI---VHADASELS-----KEKTISLLY-GELRKW 468
GQDQR GA+IVP+ E + A ++ + SELS + K I L+ EL +
Sbjct: 543 GQDQRSIGALIVPNLEALEKWADSQNVQLRLPEQNSELSTSVDLESKIIQDLFRQELNRE 602
Query: 469 TS-----KCSFQIGPIHVVDEPFTV 488
+ +IGP ++ EPF++
Sbjct: 603 VQNRPGYRLDDRIGPFRLILEPFSI 627
>gi|166368626|ref|YP_001660899.1| long-chain-fatty-acid CoA ligase [Microcystis aeruginosa NIES-843]
gi|166090999|dbj|BAG05707.1| long-chain-fatty-acid CoA ligase [Microcystis aeruginosa NIES-843]
Length = 639
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 201/450 (44%), Positives = 278/450 (61%), Gaps = 33/450 (7%)
Query: 55 TIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYE 114
T +D+AT +YTSGTTG PKGVML+H NLLHQ+R+L I + GD+ LS+LP WH YE
Sbjct: 175 TKSENDLATLIYTSGTTGQPKGVMLSHGNLLHQVRNLNAIFQPDPGDRVLSILPSWHSYE 234
Query: 115 RACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARR 174
R+C YF ++G +YT++R K DL+++ P M+ VP ++E+LY GIQKQ SA ++
Sbjct: 235 RSCEYFSLAQGCTQIYTSIRTFKSDLKQFSPQLMVGVPRLWESLYEGIQKQFSEQSATKQ 294
Query: 175 VVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEK 234
+ R L+ S Y KRI + L + I+ L ARI +L+PLH + +K
Sbjct: 295 KLVRFLLEKSEKYVIAKRIADNLSLDHLH------ASEIERLKARIQSLLLYPLHAIGDK 348
Query: 235 LVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCN 293
LVY KI+ A+G K VSGGGSL H+D FYE G+ + VGYGLTE+SPV RR N
Sbjct: 349 LVYGKIRQAVGNKVKILVSGGGSLARHLDTFYEIAGIPILVGYGLTETSPVATVRRIDHN 408
Query: 294 VLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGW 353
+ GS G P+ TEI IVD + EVLP G+V +RG QVMQGY+K P AT++A+ DGW
Sbjct: 409 LRGSAGRPVFQTEICIVDLHSKEVLPTEKHGLVLIRGPQVMQGYYKKPEATEKAISPDGW 468
Query: 354 LNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQ 413
++GDIGW+ G LVL GRAKDTIVLS GEN+EP +E+A LRS I Q
Sbjct: 469 FDSGDIGWLT----------AAGDLVLTGRAKDTIVLSNGENIEPQPIEDACLRSPFISQ 518
Query: 414 IVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI------VHAD-----ASELSKEKTISLLY 462
I+++GQDQ+ GA+IVP+ + + A+ I +H+D +S+L +K ++L
Sbjct: 519 IMLVGQDQKALGALIVPNLDILANWAQEQKISLNLPDLHSDRSTILSSDLYSKKVLALYQ 578
Query: 463 GELRKW-----TSKCSFQIGPIHVVDEPFT 487
EL++ + + QI ++ EPF+
Sbjct: 579 QELKREVRNRPSYRTDDQIKTFELILEPFS 608
>gi|425465198|ref|ZP_18844508.1| Long-chain-fatty-acid CoA ligase [Microcystis aeruginosa PCC 9809]
gi|389832583|emb|CCI23641.1| Long-chain-fatty-acid CoA ligase [Microcystis aeruginosa PCC 9809]
Length = 639
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 201/450 (44%), Positives = 278/450 (61%), Gaps = 33/450 (7%)
Query: 55 TIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYE 114
T +D+AT +YTSGTTG PKGVML+H NLLHQ+R+L I + GD+ LS+LP WH YE
Sbjct: 175 TKSENDLATLIYTSGTTGQPKGVMLSHGNLLHQVRNLNAIFQPDPGDRVLSILPSWHSYE 234
Query: 115 RACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARR 174
R+C YF ++G +YT++R K DL+++ P M+ VP ++E+LY GIQKQ SA ++
Sbjct: 235 RSCEYFSLAQGCTQIYTSIRTFKSDLKQFSPQLMVGVPRLWESLYEGIQKQFSEQSATKQ 294
Query: 175 VVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEK 234
+ R L+ S Y KRI + L + I+ L ARI +L+PLH + +K
Sbjct: 295 KLVRFLLEKSEKYVIAKRIADNLSLDHLH------ASEIERLKARIQSLLLYPLHAIGDK 348
Query: 235 LVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCN 293
LVY KI+ A+G K VSGGGSL H+D FYE G+ + VGYGLTE+SPV RR N
Sbjct: 349 LVYGKIRQAVGNKVKILVSGGGSLARHLDTFYEIAGIPILVGYGLTETSPVATVRRIDHN 408
Query: 294 VLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGW 353
+ GS G P+ TEI IVD + EVLP G+V +RG QVMQGY+K P AT++A+ DGW
Sbjct: 409 LRGSAGRPVFQTEICIVDLHSKEVLPTEKHGLVLIRGPQVMQGYYKKPEATEKAISPDGW 468
Query: 354 LNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQ 413
++GDIGW+ G LVL GRAKDTIVLS GEN+EP +E+A LRS I Q
Sbjct: 469 FDSGDIGWLT----------AAGDLVLTGRAKDTIVLSNGENIEPQPIEDACLRSPFISQ 518
Query: 414 IVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI------VHAD-----ASELSKEKTISLLY 462
I+++GQDQ+ GA+IVP+ + + A+ I +H+D +S+L +K ++L
Sbjct: 519 IMLVGQDQKALGALIVPNLDILANWAQEQKISLNLPDLHSDRSTILSSDLYSKKVLALYQ 578
Query: 463 GELRKW-----TSKCSFQIGPIHVVDEPFT 487
EL++ + + QI ++ EPF+
Sbjct: 579 QELKREVRNRPSYRTDDQIKTFELILEPFS 608
>gi|425454194|ref|ZP_18833940.1| Long-chain-fatty-acid CoA ligase [Microcystis aeruginosa PCC 9807]
gi|389805196|emb|CCI15162.1| Long-chain-fatty-acid CoA ligase [Microcystis aeruginosa PCC 9807]
Length = 639
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 211/501 (42%), Positives = 298/501 (59%), Gaps = 37/501 (7%)
Query: 9 GKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSN----DARKHYKYETIGSDDIATY 64
GK + P++ ++ V DE D G S + + A K T G +D+AT
Sbjct: 125 GKLLAKIPELPLKLIVLLTDEDPDTGAISVQTLNFKQLMAIGAENTLKPITKGENDLATL 184
Query: 65 VYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSR 124
+YTSGTTG PKGVML+H NLLHQ+R+L I + GD+ LS+LP WH YER+C YF ++
Sbjct: 185 IYTSGTTGQPKGVMLSHGNLLHQVRNLNAIFQPDPGDRVLSILPSWHSYERSCEYFSLAQ 244
Query: 125 GIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRIS 184
G +YT++R K DL+++ P M+ VP ++E+LY GIQKQ A ++ + + + S
Sbjct: 245 GCTQIYTSIRTFKQDLKQFSPQLMVGVPRLWESLYEGIQKQFSQQPAKKQKLVQFFLEKS 304
Query: 185 FAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAI 244
Y KRI + L P+ + L ARI +L+PLH + +KLVY KI+ A+
Sbjct: 305 EKYVIAKRIADNLSLDHLHASPT------ERLKARIQSLLLYPLHAIGDKLVYGKIRQAV 358
Query: 245 GIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPIN 303
G K VSGGGSL H+D FYE G+ + VGYGLTE+SPV RR N+ GS G P+
Sbjct: 359 GNKVKIFVSGGGSLARHLDTFYEIAGIPILVGYGLTETSPVATVRRIDHNLRGSAGRPVF 418
Query: 304 HTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIA 363
TEI IVD + EVLP G+V +RG QVMQGY+K P AT++A+ DGW ++GDIGW+
Sbjct: 419 QTEICIVDLHSKEVLPTEKHGLVLIRGPQVMQGYYKKPEATEKAISPDGWFDSGDIGWLT 478
Query: 364 PHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRR 423
G LVL GRAKDTIVLS GEN+EP +E+A LRS I QI+++GQDQ+
Sbjct: 479 ----------AAGDLVLTGRAKDTIVLSNGENIEPQPIEDACLRSPFISQIMLVGQDQKA 528
Query: 424 PGAIIVPDKEEVLMAA--KRLSI----VHAD-----ASELSKEKTISLLYGELRKW---- 468
GA+IVP+ + + A ++LS+ +H+D +S+L +K + L EL++
Sbjct: 529 LGALIVPNLDILANWAQEQKLSLNLPDLHSDRSTILSSDLYSKKVLDLYQQELKREVRNR 588
Query: 469 -TSKCSFQIGPIHVVDEPFTV 488
+ + QI ++ EPF++
Sbjct: 589 PSYRTDDQIKTFELILEPFSL 609
>gi|440680365|ref|YP_007155160.1| Long-chain-fatty-acid--CoA ligase [Anabaena cylindrica PCC 7122]
gi|428677484|gb|AFZ56250.1| Long-chain-fatty-acid--CoA ligase [Anabaena cylindrica PCC 7122]
Length = 660
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 202/498 (40%), Positives = 301/498 (60%), Gaps = 42/498 (8%)
Query: 1 MRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDD 60
++ +ILL + P E V ++ +++++G SN K S+
Sbjct: 165 IKLVILL----ADETPPTTENFRVVNFLQVLEIG---------SNHTLATVKQ---SSET 208
Query: 61 IATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF 120
+AT +YTSGTTG PKGVML+H+NLLHQ++SL +V + G+ LS+LP WH YER+ YF
Sbjct: 209 LATLIYTSGTTGKPKGVMLSHQNLLHQVKSLGTVVQPQKGNIVLSILPTWHSYERSGEYF 268
Query: 121 IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARAL 180
+ S+G +YT +R +K DL++++P+YMI+VP ++E++Y G+QKQ A ++ + + L
Sbjct: 269 LLSQGCTQIYTNLRAVKQDLKKFKPNYMIAVPRLWESIYEGVQKQFREQPAKKQQLIQFL 328
Query: 181 IRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKI 240
+ +S Y +RI +G L + L A+I LWP L EKLVY K+
Sbjct: 329 LDMSQKYITARRITQGLSLDHIHASSG------ERLGAKIREIALWPFQALGEKLVYAKV 382
Query: 241 QSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVG 299
+ A G K +SGGG+LP HID F+E +GV++ GYGLTE+SPV ARRP N+ GS G
Sbjct: 383 REATGGKIKQVISGGGALPRHIDNFFEIVGVEILQGYGLTETSPVTNARRPWRNLRGSSG 442
Query: 300 HPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDI 359
PI TE+KIV+ ET + LP G +G+V ++G Q+MQGY++NP ATK+ +D +GW ++GD+
Sbjct: 443 QPIPGTEVKIVNPETRQPLPVGERGLVLLKGPQIMQGYYQNPEATKKVIDAEGWFDSGDL 502
Query: 360 GWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQ 419
GW+ P + LVL GRAKDTIVL+ GEN+EP +E+A LRS + QI+++GQ
Sbjct: 503 GWVTPQND----------LVLTGRAKDTIVLTNGENIEPQPIEDACLRSPYVDQIMLVGQ 552
Query: 420 DQRRPGAIIVPDKE--EVLMAAKRLSIVHADASELSKEKTI--SLLYGELRKWTS----- 470
DQR GA+IVP+ E E + I + + ++ E I L EL +
Sbjct: 553 DQRSIGALIVPNLEALEKWAETQNDKITASTSQKIDLESKIIQDLFRQELNREVKDRPGY 612
Query: 471 KCSFQIGPIHVVDEPFTV 488
+ +IGP ++ EPF++
Sbjct: 613 RADDRIGPFKLILEPFSI 630
>gi|428224633|ref|YP_007108730.1| AMP-dependent synthetase and ligase [Geitlerinema sp. PCC 7407]
gi|427984534|gb|AFY65678.1| AMP-dependent synthetase and ligase [Geitlerinema sp. PCC 7407]
Length = 655
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 205/497 (41%), Positives = 307/497 (61%), Gaps = 40/497 (8%)
Query: 1 MRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDD 60
++ IILL + S + + +PV ++ ++++LGR D + ++ D
Sbjct: 163 LKQIILLSDETS----EAIAGVPVANFSQVMELGR-------DRSPEPIQWR-----KDV 206
Query: 61 IATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF 120
+AT +YTSGTTG PKGVMLTH NLLHQI +L +V + GD+ L++LP WH + R YF
Sbjct: 207 LATLIYTSGTTGKPKGVMLTHGNLLHQITTLGVVVQPKPGDRVLTLLPTWHSFGRVGEYF 266
Query: 121 IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARAL 180
+ ++G +YT++R++K D ++++P +M+ VP ++E++Y G+QKQ +R+ + L
Sbjct: 267 LLAQGCTQIYTSIRHVKADFRKHKPQFMVGVPRLWESIYEGVQKQFREQPESRQKLINTL 326
Query: 181 IRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKI 240
+ S Y KR+ +G L+ +QP L I A + A WPLH L E+LVY+K+
Sbjct: 327 LDFSRQYVEAKRVAQGLLLS--AEQPGGLAKAI----ASLKAAAFWPLHQLGERLVYRKV 380
Query: 241 QSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVG 299
+ A G V SGGGSL MH+++F+E +GV V VGYGLTE+SPV++ARR N+ GS G
Sbjct: 381 REATGGELTCVISGGGSLAMHLEMFFEIVGVDVLVGYGLTETSPVLSARRSWHNLRGSSG 440
Query: 300 HPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDI 359
PI T +KIVD ET + L G +G+V +G Q+M GYF+NP+AT +A+D +GW +TGD+
Sbjct: 441 RPIPGTALKIVDPETRQPLAFGDRGLVLAQGPQIMGGYFRNPTATAKAIDPEGWFDTGDL 500
Query: 360 GWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQ 419
GW+ P++ LVL GRAKDTIVL+ GEN+EP +E+A LRS+ I QI+++GQ
Sbjct: 501 GWMTPNYD----------LVLTGRAKDTIVLTNGENIEPQPIEDACLRSAYIDQIMLVGQ 550
Query: 420 DQRRPGAIIVPDKEEVLMAAKRLSIVHA-DAS-ELSKEKTISLLYGELRKWTS-----KC 472
DQ+ GA+IVP+ E + A I + DAS +L K L+ EL + +
Sbjct: 551 DQKSLGALIVPNLEALQQWALGAGITSSPDASPDLQHPKVQELIRQELNREVRDRPGYRP 610
Query: 473 SFQIGPIHVVDEPFTVN 489
+IGP ++ EPF+V
Sbjct: 611 DDRIGPFRLMAEPFSVE 627
>gi|425448641|ref|ZP_18828485.1| Long-chain-fatty-acid CoA ligase [Microcystis aeruginosa PCC 7941]
gi|389768094|emb|CCI06699.1| Long-chain-fatty-acid CoA ligase [Microcystis aeruginosa PCC 7941]
Length = 639
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 203/459 (44%), Positives = 278/459 (60%), Gaps = 33/459 (7%)
Query: 47 ARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSM 106
A K T +D+AT +YTSGTTG PKGVML+H NLLHQ+R+L I + GD+ LS+
Sbjct: 167 AENTLKPITKSENDLATLIYTSGTTGQPKGVMLSHGNLLHQVRNLNAIFQPDPGDRVLSI 226
Query: 107 LPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQI 166
LP WH YER+C YF ++G +YT++R K DL+++ P M+ VP ++E+LY GIQKQ
Sbjct: 227 LPSWHSYERSCEYFSLAQGCTQIYTSIRTFKSDLKQFSPQLMVGVPRLWESLYEGIQKQF 286
Query: 167 FTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILW 226
SA ++ + R L+ S Y KRI + L + I+ L ARI +L+
Sbjct: 287 SEQSATKQKLVRFLLEKSEKYVIAKRIADNLSLDHLH------ASEIERLKARIQSLLLY 340
Query: 227 PLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVI 285
PLH + +KLVY KI+ A+G K VSGGGSL H+D FYE G+ + VGYGLTE+SPV
Sbjct: 341 PLHAIGDKLVYGKIRQAVGNKVKILVSGGGSLARHLDTFYEIAGIPILVGYGLTETSPVA 400
Query: 286 AARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATK 345
RR N+ GS G P+ TEI IVD + EVLP G+V +RG QVMQGY+K P AT
Sbjct: 401 TVRRIDHNLRGSAGRPVFQTEICIVDLHSKEVLPTEKHGLVLIRGPQVMQGYYKKPEATD 460
Query: 346 QALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAA 405
+A+ DGW ++GDIGW+ G LVL GRAKDTIVLS GEN+EP +E+A
Sbjct: 461 KAISPDGWFDSGDIGWLT----------AAGDLVLTGRAKDTIVLSNGENIEPQPIEDAC 510
Query: 406 LRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI------VHAD-----ASELSK 454
LRS I QI+++GQDQ+ GA+IVP+ + + A+ I +H+D +S+L
Sbjct: 511 LRSPFISQIMLVGQDQKALGALIVPNLDILANWAQEQKISLNLPDLHSDRSTILSSDLYS 570
Query: 455 EKTISLLYGELRKWTS-----KCSFQIGPIHVVDEPFTV 488
+K + L EL++ + QI ++ EPF++
Sbjct: 571 KKVLDLYQQELKREVRNRPGYRADDQIKTFELILEPFSL 609
>gi|425460505|ref|ZP_18839986.1| Genome sequencing data, contig C328 [Microcystis aeruginosa PCC
9808]
gi|389826794|emb|CCI22432.1| Genome sequencing data, contig C328 [Microcystis aeruginosa PCC
9808]
Length = 639
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 201/451 (44%), Positives = 280/451 (62%), Gaps = 33/451 (7%)
Query: 55 TIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYE 114
T G +D+AT +YTSGTTG PKGVML+H NLLHQ+R+L I + GD+ LS+LP WH YE
Sbjct: 175 TKGENDLATLIYTSGTTGQPKGVMLSHGNLLHQVRNLNAIFQPDPGDRVLSILPSWHSYE 234
Query: 115 RACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARR 174
R+C YFI ++G +YT++R K DL+++ P M+ VP ++E+LY GIQKQ A ++
Sbjct: 235 RSCEYFILAQGCTQIYTSIRTFKQDLKQFSPQLMVGVPRLWESLYEGIQKQFSQQPAKKQ 294
Query: 175 VVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEK 234
+ + + S Y KRI + L + I+ L ARI +L+PLH + +K
Sbjct: 295 KLVQFFLEKSEKYVIAKRIADNLSLDHLH------ASGIERLKARIQSLLLYPLHAIGDK 348
Query: 235 LVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCN 293
LVY KI+ A+G K VSGGGSL H+D FYE G+ + VGYGLTE+SPV RR N
Sbjct: 349 LVYGKIRQAVGNKVKILVSGGGSLARHLDTFYEIAGIPILVGYGLTETSPVATVRRIDHN 408
Query: 294 VLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGW 353
+ GS G P+ TEI IVD + EVLP G+V +RG QVMQGY+K P AT++A+ DGW
Sbjct: 409 LRGSAGRPVFQTEICIVDLHSKEVLPTEKHGLVLIRGPQVMQGYYKKPEATEKAISPDGW 468
Query: 354 LNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQ 413
++GDIGW+ G LVL GRAKDTIVLS GEN+EP +E+A LRS I Q
Sbjct: 469 FDSGDIGWLT----------AAGDLVLTGRAKDTIVLSNGENIEPQPIEDACLRSPFISQ 518
Query: 414 IVVIGQDQRRPGAIIVPDKEEVLMAA--KRLSI----VHAD-----ASELSKEKTISLLY 462
I+++GQDQ+ GA+IVP+ + + A ++LS+ H+D +S+L +K ++L
Sbjct: 519 IMLVGQDQKALGALIVPNLDILANWAQEQKLSLNLPDAHSDRSTILSSDLYSKKVLALYQ 578
Query: 463 GELRKWTS-----KCSFQIGPIHVVDEPFTV 488
EL++ + QI ++ EPF++
Sbjct: 579 QELKREVRNRPGYRTDDQIKTFELILEPFSL 609
>gi|434399935|ref|YP_007133939.1| Long-chain-fatty-acid--CoA ligase [Stanieria cyanosphaera PCC 7437]
gi|428271032|gb|AFZ36973.1| Long-chain-fatty-acid--CoA ligase [Stanieria cyanosphaera PCC 7437]
Length = 640
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 190/446 (42%), Positives = 278/446 (62%), Gaps = 33/446 (7%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 118
+++AT +YTSGTTG PKG ML+H NLLHQ+ +L I+ A+ GD+ LS+LP WH YER+
Sbjct: 179 ENLATLIYTSGTTGKPKGAMLSHGNLLHQVNNLTSIIKADVGDRVLSILPSWHAYERSAE 238
Query: 119 YFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 178
YF+F++G L YT +R+LK DLQ+YQPHYM++VP ++E++Y G+QKQ +++ +
Sbjct: 239 YFLFAQGCTLYYTNLRSLKSDLQKYQPHYMVAVPRLWESIYEGVQKQFREQPPSKQKLIN 298
Query: 179 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 238
I+ Y +RI EG L +++ L A+ ++L PL+ L +++V+K
Sbjct: 299 YFFEIAEEYIEARRIAEGMSLEH------LNLSVGARLLAKTKASLLLPLYNLGDRIVFK 352
Query: 239 KIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 297
K++ A+G + K V+GGGSL H+D FYE + + + VGYGLTE+SPV AR N G+
Sbjct: 353 KVRQAVGSNVKTLVNGGGSLAKHLDDFYEIVKIPLLVGYGLTETSPVTNARTLKHNFRGT 412
Query: 298 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 357
G PI TEIKIVD +T + LP G +G+V +RG QVMQGY+KNP AT +A+D +GW ++G
Sbjct: 413 AGKPIPETEIKIVDPQTRQTLPQGQQGLVLIRGPQVMQGYYKNPEATAKAIDPEGWFDSG 472
Query: 358 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 417
D+GW+ P + L+L GRAKDTIVLS GEN+EP +E+A +RS I QI+++
Sbjct: 473 DLGWVTPDND----------LILTGRAKDTIVLSNGENIEPQPIEDACVRSPYIDQIMLV 522
Query: 418 GQDQRRPGAIIVPD-----------KEEVLMAAKRLSIVHADASELSKEKTISLLYGELR 466
GQDQR GA+IVP+ K + + A S+ S+L + +L EL
Sbjct: 523 GQDQRALGALIVPNLDALQQWATNQKLNLNLPAPNTSLAEISQSDLYSKPVQNLFRQELN 582
Query: 467 KWTS-----KCSFQIGPIHVVDEPFT 487
+ +IG ++ EPF+
Sbjct: 583 SQVQNRPGYRADDRIGTFRLILEPFS 608
>gi|425443867|ref|ZP_18823930.1| Long-chain-fatty-acid CoA ligase [Microcystis aeruginosa PCC 9443]
gi|389733516|emb|CCI02743.1| Long-chain-fatty-acid CoA ligase [Microcystis aeruginosa PCC 9443]
Length = 639
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 199/451 (44%), Positives = 279/451 (61%), Gaps = 33/451 (7%)
Query: 55 TIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYE 114
T G +D+AT +YTSGTTG PKGVML+H NLLHQ+R+L I + GD+ LS+LP WH YE
Sbjct: 175 TKGENDLATLIYTSGTTGQPKGVMLSHGNLLHQVRNLNAIFQPDPGDRVLSILPSWHSYE 234
Query: 115 RACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARR 174
R+C YF ++G +YT++R K DL+++ P M+ VP ++E+LY GIQKQ A ++
Sbjct: 235 RSCEYFSLAQGCTQIYTSIRTFKQDLKQFSPQLMVGVPRLWESLYEGIQKQFSQQPAKKQ 294
Query: 175 VVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEK 234
+ + + S Y KRI + L P + L ARI +L+PLH + +K
Sbjct: 295 KLVQFFLEKSEKYVIAKRIADNLSLDHLHASPG------ERLKARIQSLLLYPLHAIGDK 348
Query: 235 LVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCN 293
LVY KI+ A+G K VSGGGSL H+D FYE G+ + VGYGLTE+SPV RR N
Sbjct: 349 LVYSKIRQAVGNKVKIFVSGGGSLARHLDTFYEIAGIPILVGYGLTETSPVATVRRIDHN 408
Query: 294 VLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGW 353
+ GS G P+ TEI IVD + EVLP G+V +RG QVM+GY+K P AT++A+ DGW
Sbjct: 409 LRGSAGRPVLQTEISIVDLHSKEVLPTEKHGLVLIRGPQVMRGYYKKPEATEKAISPDGW 468
Query: 354 LNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQ 413
++GDIGW+ G LVL GRAKDTIVLS GEN+EP +E+A LRS I Q
Sbjct: 469 FDSGDIGWLT----------AAGDLVLTGRAKDTIVLSNGENIEPQPIEDACLRSPFISQ 518
Query: 414 IVVIGQDQRRPGAIIVPDKEEVLMAA--KRLSI----VHAD-----ASELSKEKTISLLY 462
I+++GQDQ+ GA+IVP+ + + A ++LS+ +H+D +S+L +K + L
Sbjct: 519 IMLVGQDQKALGALIVPNLDILANWAQEQKLSLNLPDLHSDRSTILSSDLYSKKVLDLYQ 578
Query: 463 GELRKW-----TSKCSFQIGPIHVVDEPFTV 488
EL++ + + QI ++ EPF++
Sbjct: 579 QELKREVRNRPSYRTDDQIKTFELILEPFSL 609
>gi|428769075|ref|YP_007160865.1| long-chain-fatty-acid--CoA ligase [Cyanobacterium aponinum PCC
10605]
gi|428683354|gb|AFZ52821.1| Long-chain-fatty-acid--CoA ligase [Cyanobacterium aponinum PCC
10605]
Length = 642
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 201/460 (43%), Positives = 288/460 (62%), Gaps = 33/460 (7%)
Query: 47 ARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSM 106
A++ + + + D +AT +YTSGTTG PKGVML+H+NLLHQ+ L I+ + GD+ LS+
Sbjct: 170 AQRPFIFVPVEKDTLATLIYTSGTTGKPKGVMLSHRNLLHQVCHLDVILQPKKGDRILSI 229
Query: 107 LPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQI 166
LP WH YERA YF+ SRG L+YT +R K DL++ +PH+MI VP ++E++Y G+QKQ
Sbjct: 230 LPSWHSYERAAEYFLLSRGTTLIYTNIRYFKQDLKKIKPHHMIGVPRLWESIYEGVQKQF 289
Query: 167 FTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILW 226
S ++ + + S Y KRI G L PS L A+I +L
Sbjct: 290 RDGSKTQQKLVNFFLATSEKYIKAKRIKNGLDL--EHLNPSSGQKLT----AKITSTLLL 343
Query: 227 PLHLLAEKLVYKKIQSAIG-ISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVI 285
P+H L +KL+Y K++ +G + VSGGGSL HID F++ +G+ + VGYGLTE+SPV
Sbjct: 344 PVHKLGDKLIYTKVREGVGGCIQTWVSGGGSLAKHIDNFFQIVGIPLIVGYGLTETSPVT 403
Query: 286 AARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATK 345
ARR + N++G+ G PI TEIKIV+ ET E LP G KG+V +RG+QVMQGY+KNP AT
Sbjct: 404 NARRISRNIVGASGQPIPETEIKIVNPETRETLPQGEKGLVFIRGTQVMQGYYKNPEATT 463
Query: 346 QALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAA 405
+A+DE+GW ++GD+GW+ P + LV+ GRAKDTIVLS GEN+EP LE+A
Sbjct: 464 KAIDEEGWFDSGDLGWVTPDND----------LVITGRAKDTIVLSNGENIEPQPLEDAC 513
Query: 406 LRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAK------RLSIVHADASELSKEK--- 456
+RS I QI+V+GQDQ+ GA+IVP+ E + + L V A+ +E+ K
Sbjct: 514 VRSPYIDQIMVVGQDQKYLGALIVPNLEALQKWGEEQNRILNLPSVGANRAEIEKSDLYS 573
Query: 457 --TISLLYGEL-RKWTSKCSFQIGP----IHVVDEPFTVN 489
+SL EL R+ ++ ++I ++ EPF+++
Sbjct: 574 SGVLSLYKQELAREVKNRPGYRIDDRISVFELILEPFSID 613
>gi|440754872|ref|ZP_20934074.1| AMP-binding enzyme family protein [Microcystis aeruginosa TAIHU98]
gi|440175078|gb|ELP54447.1| AMP-binding enzyme family protein [Microcystis aeruginosa TAIHU98]
Length = 639
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 204/459 (44%), Positives = 281/459 (61%), Gaps = 33/459 (7%)
Query: 47 ARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSM 106
A K T +D+AT +YTSGTTG PKGVML+H NLLHQ+R+L I + GD+ LS+
Sbjct: 167 AENTLKPITKSENDLATLIYTSGTTGQPKGVMLSHGNLLHQVRNLNAIFQPDPGDRVLSI 226
Query: 107 LPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQI 166
LP WH YER+C YF ++G +YT++R K DL+++ P M+ VP ++E+LY GIQKQ
Sbjct: 227 LPSWHSYERSCEYFSLAQGCTQIYTSIRTFKQDLKQFSPQLMVGVPRLWESLYEGIQKQF 286
Query: 167 FTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILW 226
SA ++ + R L+ S Y KRI + L + I+ L ARI +L+
Sbjct: 287 SEQSATKQKLVRFLLEKSENYVIAKRIADNLSLDHLH------ASGIERLKARIQSLLLY 340
Query: 227 PLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVI 285
PLH + +KLVY KI+ A+G K VSGGGSL H+D FYE G+ + VGYGLTE+SPV
Sbjct: 341 PLHAIGDKLVYGKIRQAVGNKVKILVSGGGSLARHLDTFYEIAGIPILVGYGLTETSPVA 400
Query: 286 AARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATK 345
RR N+ GS G P+ TEI IVD + EVLP G+V +RG QVMQGY+K P AT+
Sbjct: 401 TVRRIDHNLRGSAGRPVFQTEICIVDLHSKEVLPTEKHGLVLIRGPQVMQGYYKKPEATE 460
Query: 346 QALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAA 405
+A+ DGW ++GDIGW+ G LVL GRAKDTIVLS GEN+EP +E+A
Sbjct: 461 KAISPDGWFDSGDIGWLT----------AAGDLVLTGRAKDTIVLSNGENIEPQPIEDAC 510
Query: 406 LRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAA--KRLSI----VHAD-----ASELSK 454
LRS I QI+++GQDQ+ GA+IVP+ + + A ++LS+ H+D +S+L
Sbjct: 511 LRSPFISQIMLVGQDQKALGALIVPNLDILANWAQEQKLSLNLPDPHSDRSTILSSDLYS 570
Query: 455 EKTISLLYGELRKWTS-----KCSFQIGPIHVVDEPFTV 488
+K + L EL++ + QI ++ EPF++
Sbjct: 571 KKVLDLYQQELKREVRNRPGYRTDDQIKTFELILEPFSL 609
>gi|119510427|ref|ZP_01629561.1| hypothetical protein N9414_18935 [Nodularia spumigena CCY9414]
gi|119464956|gb|EAW45859.1| hypothetical protein N9414_18935 [Nodularia spumigena CCY9414]
Length = 658
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 193/446 (43%), Positives = 285/446 (63%), Gaps = 32/446 (7%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 118
D +AT +YTSGTTG PKGVML+H NLLHQ+++L +V + GD LS+LP WH YER+
Sbjct: 199 DSLATLIYTSGTTGKPKGVMLSHNNLLHQVKTLGTVVQPQPGDVILSILPSWHSYERSGE 258
Query: 119 YFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 178
YF+ S+G +YT +R++K DL++++PHYMI+VP ++E+++ G+ KQ A ++ +
Sbjct: 259 YFLLSQGCTQVYTNLRSVKQDLKKFKPHYMIAVPRLWESIHEGVLKQFREQPANKQRLIN 318
Query: 179 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 238
L+ +S Y +RI +G L N S L + ++I+ +L P H L E+LVY
Sbjct: 319 FLLGMSETYIQKQRIAQGLSL--NHLHASSL----EKFASKIVALVLLPFHALGERLVYA 372
Query: 239 KIQSAIG-ISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 297
K++ A+G K ++GGG+LP HID F+E I V++ GYGLTE+SPV ARRP NV GS
Sbjct: 373 KVREAVGGRMKHVITGGGALPRHIDTFFEIISVEILQGYGLTETSPVTNARRPWHNVRGS 432
Query: 298 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 357
G PI TE+KIVD ET LP G +G+V ++G Q+MQGY++NP AT + +D +GW N+G
Sbjct: 433 SGQPIAGTEVKIVDPETKVPLPLGERGLVLLKGPQIMQGYYQNPEATAKVIDAEGWFNSG 492
Query: 358 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 417
D+GW+ P + LVL GRAKDTIVL+ GEN+EP +E+A LRS + QI+++
Sbjct: 493 DLGWVTPEND----------LVLTGRAKDTIVLTNGENIEPQPIEDACLRSPYVDQIMLV 542
Query: 418 GQDQRRPGAIIVPDKEEVLMAAK----RLSIVHADASELS-----KEKTISLLY-GELRK 467
GQDQR GA+IVP+ E + A +L ++ ++ E+S + K I L+ EL +
Sbjct: 543 GQDQRSIGALIVPNTEALKTWASSQNLQLPLLQENSPEISTSIDLESKMIQDLFRQELNR 602
Query: 468 WTS-----KCSFQIGPIHVVDEPFTV 488
+ ++GP ++ EPF++
Sbjct: 603 EVQNRPGYRADDRVGPFRLILEPFSM 628
>gi|86609627|ref|YP_478389.1| long-chain-fatty-acid-CoA ligase [Synechococcus sp.
JA-2-3B'a(2-13)]
gi|86558169|gb|ABD03126.1| putative long-chain-fatty-acid-CoA ligase [Synechococcus sp.
JA-2-3B'a(2-13)]
Length = 628
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 193/449 (42%), Positives = 279/449 (62%), Gaps = 23/449 (5%)
Query: 47 ARKH-YKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLS 105
R+H Y+ + +AT +YTSGT+G PKGVML+H NL+HQ+ +L +V + G+K L+
Sbjct: 164 GREHTYQPPKLERSQLATIIYTSGTSGRPKGVMLSHGNLMHQVENLGVVVQPQPGNKVLT 223
Query: 106 MLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQ 165
+LP WH YERAC YF+ SR L+YT+ R +K D Q+ PH++++VP ++ET+Y GIQ+Q
Sbjct: 224 ILPTWHSYERACEYFLLSRACMLVYTSPRFIKQDFQQEHPHFLVAVPRIWETVYEGIQRQ 283
Query: 166 IFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAIL 225
S + + RAL+ +S ++ RI RNQ Y V+ L AR+ +L
Sbjct: 284 FKEKSPLMQRLIRALMAVSESHVLSGRI------ARNQSILHYGVSPWVRLQARLQHWLL 337
Query: 226 WPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPV 284
WPLH LA+ L+Y+K++ A+G + + +SGGGSLP ++DLFYE +G+ + GYGLTE+SPV
Sbjct: 338 WPLHRLADALIYRKVRQALGPNFQHAISGGGSLPAYLDLFYEVVGISILNGYGLTETSPV 397
Query: 285 IAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSAT 344
+ ARRP NV G+ G P+ TE +IVD ET + LP KG++ RG QVM GY+ NP AT
Sbjct: 398 LCARRPDNNVRGTAGPPLPGTEFRIVDPETRQPLPPREKGLILARGPQVMMGYYNNPEAT 457
Query: 345 KQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEA 404
+ L DGW TGD+GW+ P G LV+ GRAKD IVL GEN+EP LE+A
Sbjct: 458 AKVLSSDGWFETGDLGWLTPD----------GQLVITGRAKDVIVLLNGENIEPQPLEDA 507
Query: 405 ALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGE 464
L+S I QIV++GQDQ++ A+I P+ + + A I DA L++ +T +L+ E
Sbjct: 508 CLQSPYISQIVIVGQDQKKLAALIYPNLDALKAWAAEQGIPAEDAELLAQPQTRTLILQE 567
Query: 465 LRKWTS-----KCSFQIGPIHVVDEPFTV 488
+R+ + Q+ + EP +V
Sbjct: 568 VRRRIQERPGYRPDEQVSDFRFLPEPLSV 596
>gi|425438549|ref|ZP_18818893.1| Long-chain-fatty-acid CoA ligase [Microcystis aeruginosa PCC 9717]
gi|389718106|emb|CCH97904.1| Long-chain-fatty-acid CoA ligase [Microcystis aeruginosa PCC 9717]
Length = 639
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 201/450 (44%), Positives = 279/450 (62%), Gaps = 33/450 (7%)
Query: 55 TIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYE 114
T +D+AT +YTSGTTG PKGVML+H NLLHQ+R L I + GD+ LS+LP WH YE
Sbjct: 175 TKSENDLATLIYTSGTTGQPKGVMLSHGNLLHQVRHLNAIFQPDPGDRVLSILPSWHSYE 234
Query: 115 RACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARR 174
R+C YF ++G +YT++R K DL+++ P M+ VP ++E+LY GIQKQ A ++
Sbjct: 235 RSCEYFSLAQGCTQIYTSIRTFKQDLKQFSPQLMVGVPRLWESLYEGIQKQFSEQPATKQ 294
Query: 175 VVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEK 234
+ R L+ S Y KRI + L + I+ L ARI +L+PLH + +K
Sbjct: 295 KLVRFLLEKSEKYVIAKRIADNLSLDHLH------ASGIERLKARIQSLLLYPLHAIGDK 348
Query: 235 LVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCN 293
LVY KI+ A+G K VSGGGSL H+D FYE G+ + VGYGLTE+SPV RR N
Sbjct: 349 LVYGKIRQAVGNKVKILVSGGGSLARHLDTFYEIAGIPILVGYGLTETSPVATVRRIDHN 408
Query: 294 VLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGW 353
+ GS G P+ TEI IVD + EVLP G+V +RG QVMQGY+K P AT++A+ DGW
Sbjct: 409 LRGSAGRPVFQTEICIVDLHSKEVLPTEKHGLVLIRGPQVMQGYYKKPEATEKAISPDGW 468
Query: 354 LNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQ 413
++GDIGW+ G LVL GRAKDTIVLS GEN+EP +E+A LRS I Q
Sbjct: 469 FDSGDIGWLT----------AAGDLVLTGRAKDTIVLSNGENIEPQPIEDACLRSPFISQ 518
Query: 414 IVVIGQDQRRPGAIIVPDKEEVLMAA--KRLSI----VHAD-----ASELSKEKTISLLY 462
I+++GQDQ+ GA+IVP+ + + A ++LS+ +H+D +S+L +K ++L
Sbjct: 519 IMLVGQDQKALGALIVPNLDILANWAQEQKLSLNLPDLHSDRSMILSSDLYSKKVLALYQ 578
Query: 463 GELRKW-----TSKCSFQIGPIHVVDEPFT 487
EL++ + + QI ++ EPF+
Sbjct: 579 QELKREVRNRPSYRADDQIKTFELILEPFS 608
>gi|56750633|ref|YP_171334.1| long-chain-fatty-acid CoA ligase [Synechococcus elongatus PCC 6301]
gi|56685592|dbj|BAD78814.1| long-chain-fatty-acid CoA ligase [Synechococcus elongatus PCC 6301]
Length = 649
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 190/433 (43%), Positives = 276/433 (63%), Gaps = 18/433 (4%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 118
D +AT +YTSGTTG PKGVML+H NLLHQ+ +L +V + GD LS+LP WH YERAC
Sbjct: 202 DRLATLIYTSGTTGRPKGVMLSHGNLLHQVTTLGVVVQPQPGDTVLSILPTWHSYERACE 261
Query: 119 YFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 178
YF+ S+G +YT +RN+K D+++Y+P +M+SVP ++E++Y G+QKQ A +R +
Sbjct: 262 YFLLSQGCTQVYTTLRNVKQDIRQYRPQFMVSVPRLWESIYEGVQKQFREQPAKKRRLID 321
Query: 179 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 238
+S Y +R ++G L + P+ +A R++ L PLH L ++LVY
Sbjct: 322 TFFGLSQRYVLARRRWQGLDLLALNQSPAQRLA----EGVRMLA--LAPLHKLGDRLVYG 375
Query: 239 KIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 297
K++ A G + +SGGGSL +H+D F+E +GV + VGYGLTE+SPV+ RRP N+ GS
Sbjct: 376 KVREATGGRIRQVISGGGSLALHLDTFFEIVGVDLLVGYGLTETSPVLTGRRPWHNLRGS 435
Query: 298 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 357
G PI T I+IVD ET E P+G +G+V +G Q+MQGYF P AT +A+D +GW +TG
Sbjct: 436 AGQPIPGTAIRIVDPETKENRPSGDRGLVLAKGPQIMQGYFNKPEATAKAIDAEGWFDTG 495
Query: 358 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 417
D+G+I G LVL GRAKDTIVL+ GEN+EP +E+A LRSS I QI+++
Sbjct: 496 DLGYIVGE----------GNLVLTGRAKDTIVLTNGENIEPQPIEDACLRSSYISQIMLV 545
Query: 418 GQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTS-KCSFQI 476
GQD++ GA+IVP++E + + A I D + ++ L E+R + +I
Sbjct: 546 GQDRKSLGALIVPNQEAIALWASEQGISQTDLQGVVQKLIREELNREVRDRPGYRIDDRI 605
Query: 477 GPIHVVDEPFTVN 489
GP +++EPF++
Sbjct: 606 GPFRLIEEPFSME 618
>gi|86604864|ref|YP_473627.1| long-chain-fatty-acid-CoA ligase-like protein [Synechococcus sp.
JA-3-3Ab]
gi|86553406|gb|ABC98364.1| long-chain-fatty-acid-CoA ligase-like protein [Synechococcus sp.
JA-3-3Ab]
Length = 626
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 199/476 (41%), Positives = 281/476 (59%), Gaps = 34/476 (7%)
Query: 20 EEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVML 79
EE V ++ + + GRE R Y+ + +AT +YTSGT+G PKGVML
Sbjct: 148 EEPGVLNFSQWLQKGRERR------------YEPPRLERSQLATIIYTSGTSGRPKGVML 195
Query: 80 THKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDD 139
+H NL+HQ+ +L+ +V GDK L++LP WH YERAC YF+ S+ L+YT R +K D
Sbjct: 196 SHGNLMHQVENLHVVVQPRPGDKVLTILPTWHSYERACEYFLLSQACTLVYTNPRFIKQD 255
Query: 140 LQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCL 199
Q+ QPHY+++VP ++ET+Y GIQ+Q S + + R L+ S Y RI
Sbjct: 256 FQQEQPHYLVAVPRIWETVYEGIQRQFKEKSPLMQRLIRTLMAASEGYVLAGRI------ 309
Query: 200 TRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLP 258
N+ Y V+ L AR+ +LWP+H LA+ L+Y+K++ A+G + + +SGGGSLP
Sbjct: 310 AGNRSILHYGVSPWVRLGARLQQGLLWPVHRLADALIYRKVRQALGPNFQQAISGGGSLP 369
Query: 259 MHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVL 318
++DLFYE +G+ + GYGLTE+SPV+ ARRP NV G+ G P+ TE +IVD ET + L
Sbjct: 370 AYLDLFYEVVGISILNGYGLTETSPVLCARRPDNNVRGTAGPPLPGTEFRIVDPETRQPL 429
Query: 319 PAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVL 378
P G KG++ RG QVM GY+ NP AT + L DGW TGD+GW+ P G L
Sbjct: 430 PPGEKGLILARGPQVMMGYYNNPEATAKVLSPDGWFETGDLGWLTPD----------GQL 479
Query: 379 VLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMA 438
V+ GRAKD IVL GENVEP LE+A L+S I QIV++GQDQ++ A+I P+ + +
Sbjct: 480 VITGRAKDVIVLLNGENVEPQPLEDACLQSPYISQIVIVGQDQKKLAALIYPNLDVLKAW 539
Query: 439 AKRLSIVHADASELSKEKTISLLYGELRKWTS-----KCSFQIGPIHVVDEPFTVN 489
A I A+A L + +L+ E+R + QI + EP +V
Sbjct: 540 AAEQGIPAAEAELLGHPQVRTLILQEVRARIQERPGYRPHEQIADFRFLPEPLSVE 595
>gi|126659901|ref|ZP_01731025.1| long-chain-fatty-acid CoA ligase [Cyanothece sp. CCY0110]
gi|126618765|gb|EAZ89510.1| long-chain-fatty-acid CoA ligase [Cyanothece sp. CCY0110]
Length = 638
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 209/508 (41%), Positives = 297/508 (58%), Gaps = 55/508 (10%)
Query: 1 MRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDD 60
++ IILL S P + I +Y ++++ G A+ T DD
Sbjct: 136 LQLIILL----SDETPKADDTIKTLNYTQLMEEG------------AKHSLNPITKDEDD 179
Query: 61 IATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF 120
+AT +YTSGTTG PKG ML+H NLLHQ+R+L ++ + GDK LS+LP WH YER+ YF
Sbjct: 180 LATLIYTSGTTGQPKGAMLSHGNLLHQVRNLNAVIQPQPGDKVLSILPSWHAYERSGEYF 239
Query: 121 IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARAL 180
+ S+G L+YT +RN K DL++++PH+M+ VP ++++LY GIQKQ S ++ +
Sbjct: 240 LLSQGCTLIYTNIRNFKTDLKKFKPHHMVGVPRLWDSLYEGIQKQFREQSPTQQKIVEFF 299
Query: 181 IRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKI 240
IS + +RI L + + I+ AR+ ++L PLH L +KLVYKKI
Sbjct: 300 FNISRTFILSRRIANNMSLEH------FDASAIERSIARLKASLLAPLHSLGDKLVYKKI 353
Query: 241 QSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVG 299
+ +G + + VSGGGSL H+D FYE I V V VGYGLTE++PV AR + N+ GS G
Sbjct: 354 REGLGGNFETLVSGGGSLAKHLDDFYEIINVPVLVGYGLTETAPVTNARTHSHNLRGSSG 413
Query: 300 HPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDI 359
PI TEIKIVD +T E L G KG+V +RG Q+MQGY+K P AT +A++ +GW ++GD+
Sbjct: 414 QPIPKTEIKIVDLDTREPLSQGKKGVVLLRGPQIMQGYYKKPEATAKAINPEGWFDSGDL 473
Query: 360 GWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQ 419
GWI P + LV+ GRAKDTIVLS GEN+EP +E+A +RS I Q++++GQ
Sbjct: 474 GWITPMND----------LVITGRAKDTIVLSNGENIEPQPIEDACIRSPYIDQMMLVGQ 523
Query: 420 DQRRPGAIIVP--------DKEEVLM------AAKRLSIVHADASELSKEKTISLLYGEL 465
DQ+ GA+IVP DK + L A R +IV++D L + L EL
Sbjct: 524 DQKALGALIVPNLDALQTWDKNQQLNLTFPPEDASREAIVNSD---LYGKPVQDLFKQEL 580
Query: 466 RKWTS-----KCSFQIGPIHVVDEPFTV 488
+ + QI ++ EPF+V
Sbjct: 581 NREVKNRPGYRADDQIKAFELILEPFSV 608
>gi|334117580|ref|ZP_08491671.1| Long-chain-fatty-acid--CoA ligase [Microcoleus vaginatus FGP-2]
gi|333460689|gb|EGK89297.1| Long-chain-fatty-acid--CoA ligase [Microcoleus vaginatus FGP-2]
Length = 649
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 207/496 (41%), Positives = 293/496 (59%), Gaps = 43/496 (8%)
Query: 1 MRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDD 60
++ I+LL S P+ + + + +++ G + + +N +K +T+
Sbjct: 161 IQLIVLL----SDEEPETSQTLSTVKFSQVMTTG--ANRPLKPTN-----HKPQTL---- 205
Query: 61 IATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF 120
AT +YTSGTTG PKGVMLTH NLLHQ+ +L I+ E G+ LS+LP WH YER+ YF
Sbjct: 206 -ATLLYTSGTTGKPKGVMLTHGNLLHQLTTLGTILQPEAGESALSILPSWHAYERSVEYF 264
Query: 121 IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARAL 180
+ S+G +YT +R K D + Y+P YM+SVP ++E++Y +QKQ ++ + L
Sbjct: 265 LLSQGCTQIYTNIRYFKQDFKTYKPQYMVSVPRIWESIYEAVQKQFREQPPNKQKLVDFL 324
Query: 181 IRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKI 240
+ S Y +RI +G L+ S + L AR +L P+H LAEKLVY+K+
Sbjct: 325 LSASQQYIETRRICQGLTLSLKPASGS------EKLIARTKSILLSPVHALAEKLVYQKV 378
Query: 241 QSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVG 299
+ A G K +SGGGSL HID F+E + + VGYGLTE+SPV+ RRP N+ GS G
Sbjct: 379 REATGGRLKWAISGGGSLAAHIDNFFEIANIGLLVGYGLTETSPVLTVRRPWHNLKGSAG 438
Query: 300 HPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDI 359
P+ HTEIKIVD ET + LP G +G+V RG Q+MQGY+ NP AT +A+D +GW +TGD+
Sbjct: 439 QPLAHTEIKIVDPETRQQLPTGQRGLVLARGPQIMQGYYLNPQATAKAIDPEGWFDTGDL 498
Query: 360 GWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQ 419
GW+ P G L+L GRAKDTIVLS GEN+EP +E+A LRS I QI+++GQ
Sbjct: 499 GWLTP----------GNDLILTGRAKDTIVLSNGENIEPQPIEDACLRSPYIDQIMLVGQ 548
Query: 420 DQRRPGAIIVPDKEEVLMAAKRLSIVHADASELS-KEKTISLLY-GELRKWTS-----KC 472
DQR GA+IVP+ E V K + E+ KTI L+ EL + +
Sbjct: 549 DQRSVGALIVPNAEAV---QKWAETQNPPLHEIDWNSKTIQDLFRKELNREVQNRPGYRA 605
Query: 473 SFQIGPIHVVDEPFTV 488
+IGP ++ EPF++
Sbjct: 606 DDRIGPFRLIQEPFSM 621
>gi|425437694|ref|ZP_18818109.1| Genome sequencing data, contig C328 [Microcystis aeruginosa PCC
9432]
gi|389677326|emb|CCH93752.1| Genome sequencing data, contig C328 [Microcystis aeruginosa PCC
9432]
Length = 639
Score = 370 bits (950), Expect = e-99, Method: Compositional matrix adjust.
Identities = 201/459 (43%), Positives = 280/459 (61%), Gaps = 33/459 (7%)
Query: 47 ARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSM 106
A K T G +D+AT +YTSGTTG PKGVML+H NLLHQ+R+L I + GD+ LS+
Sbjct: 167 AENTLKPITKGENDLATLIYTSGTTGQPKGVMLSHGNLLHQVRNLNAIFQPDPGDRVLSI 226
Query: 107 LPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQI 166
LP WH YER+C YF ++G +YT++R K DL+++ P M+ VP ++E+LY GIQKQ
Sbjct: 227 LPSWHSYERSCEYFSLAQGCTQIYTSIRTFKQDLKQFSPQLMVGVPRLWESLYEGIQKQF 286
Query: 167 FTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILW 226
A ++ + + + S Y KRI + L + I+ L ARI +L+
Sbjct: 287 SQQPAKKQKLVQFFLEKSEKYVIAKRIADNLSLDHLH------ASGIERLKARIQSLLLY 340
Query: 227 PLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVI 285
PLH + +KLVY KI+ A+G K VSGGGSL H+D FYE G+ + VGYGLTE+SPV
Sbjct: 341 PLHAIGDKLVYGKIRQAVGNKVKILVSGGGSLARHLDTFYEIAGIPILVGYGLTETSPVA 400
Query: 286 AARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATK 345
RR N+ GS G P+ TEI IVD + EVLP G+V +RG QVMQGY+K P AT+
Sbjct: 401 TVRRIDHNLRGSAGRPVFQTEICIVDLHSKEVLPTEKHGLVLIRGPQVMQGYYKKPEATE 460
Query: 346 QALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAA 405
+A+ DGW ++GDIGW+ G LVL GRAKDTIVLS GEN+EP +E+A
Sbjct: 461 KAISPDGWFDSGDIGWLT----------AAGDLVLTGRAKDTIVLSNGENIEPQPIEDAC 510
Query: 406 LRSSLIRQIVVIGQDQRRPGAIIVPDKEEVL--MAAKRLSI----VHAD-----ASELSK 454
LRS I QI+++GQDQ+ GA+IVP+ + + + ++LS+ H+D +S+L
Sbjct: 511 LRSPFISQIMLVGQDQKALGALIVPNLDILANWVQEQKLSLNLPDPHSDRSTILSSDLYS 570
Query: 455 EKTISLLYGELRKWTS-----KCSFQIGPIHVVDEPFTV 488
+K + L EL++ + QI ++ EPF++
Sbjct: 571 KKVLDLYQQELKREVRNRPGYRTDDQIKTFELILEPFSL 609
>gi|434406627|ref|YP_007149512.1| AMP-forming long-chain acyl-CoA synthetase [Cylindrospermum
stagnale PCC 7417]
gi|428260882|gb|AFZ26832.1| AMP-forming long-chain acyl-CoA synthetase [Cylindrospermum
stagnale PCC 7417]
Length = 658
Score = 369 bits (946), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 203/505 (40%), Positives = 303/505 (60%), Gaps = 49/505 (9%)
Query: 1 MRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDD 60
++ +ILL S P E I V ++ +++++G + ND D
Sbjct: 157 IQLVILL----SDETPPTDEFIKVLNFSQLMEVGAKHNFVPVKQND------------DT 200
Query: 61 IATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF 120
+AT +YTSGTTG PKGVML+H NLLHQ+++L +V + GDK LS+LP WH YER+ YF
Sbjct: 201 LATLIYTSGTTGKPKGVMLSHGNLLHQVKALGAVVQPQVGDKVLSILPSWHSYERSGEYF 260
Query: 121 IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARAL 180
+ S+G E +YT +R++K DL++++P +MI+VP ++E++Y G+QKQ A ++ + + L
Sbjct: 261 LLSQGCEQIYTNLRSVKADLKKFKPRFMIAVPRLWESIYEGVQKQFREQPANKQRLIKFL 320
Query: 181 IRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKI 240
+ IS Y RI E L + + L +RI+ + L+P H L E+LVY K+
Sbjct: 321 LGISEKYIKAGRIAENLSLEH------LDASTFERLASRILASALFPFHALGERLVYAKV 374
Query: 241 QSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVG 299
+ A G K +SGGG+LP HID F+E GV++ VGYGLTE+SPV ARRP N G+ G
Sbjct: 375 REATGGRIKYVISGGGALPKHIDNFFEITGVEILVGYGLTETSPVTHARRPWRNFRGTAG 434
Query: 300 HPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDI 359
PI TE KIVD E+ + L A +G+V +RG Q+MQGY++NP AT +A+D +GW ++GD+
Sbjct: 435 QPIPGTEAKIVDPESRKPLAARERGLVLLRGPQIMQGYYQNPEATAKAIDAEGWFDSGDL 494
Query: 360 GWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQ 419
GW+ P + LVL GRAKDTIVL+ GEN+EP +E+A LRS + QI+++GQ
Sbjct: 495 GWLTPEND----------LVLTGRAKDTIVLTNGENIEPQPIEDACLRSPYVDQIMLVGQ 544
Query: 420 DQRRPGAIIVPDKE---------EVLMAAKRLSIVHADASELSKEKTI--SLLYGELRKW 468
DQR GAIIVP+ E + ++ + +I + +++ E TI L EL +
Sbjct: 545 DQRCIGAIIVPNIEALEKWAEGQNLTLSIQSENITASPGQKINLESTIIQDLFRQELNRE 604
Query: 469 TS-----KCSFQIGPIHVVDEPFTV 488
+ +I ++ EPF++
Sbjct: 605 VQNRPGYRADDRINRFKLIVEPFSM 629
>gi|67921002|ref|ZP_00514521.1| AMP-dependent synthetase and ligase [Crocosphaera watsonii WH 8501]
gi|416380779|ref|ZP_11684127.1| Long-chain-fatty-acid--CoA ligase [Crocosphaera watsonii WH 0003]
gi|67857119|gb|EAM52359.1| AMP-dependent synthetase and ligase [Crocosphaera watsonii WH 8501]
gi|357265616|gb|EHJ14357.1| Long-chain-fatty-acid--CoA ligase [Crocosphaera watsonii WH 0003]
Length = 638
Score = 369 bits (946), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 196/467 (41%), Positives = 288/467 (61%), Gaps = 35/467 (7%)
Query: 1 MRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDD 60
++ IILL S P+ + I ++ ++++LG ++ ND D
Sbjct: 136 LQLIILL----SDETPNRDDPIKTLNFSQLMELGAKNSLQPVKKNDT------------D 179
Query: 61 IATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF 120
+AT +YTSGTTG PKG ML+H NLLHQ+++L ++ + GD+ LS+LP WH YER+ YF
Sbjct: 180 LATLIYTSGTTGQPKGAMLSHGNLLHQVKNLDAVIQPKVGDQVLSILPSWHSYERSAEYF 239
Query: 121 IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARAL 180
+ S+G L+YT +RN K D++R++P +M+ VP +++++Y GIQKQ+ S ++ +A+
Sbjct: 240 LLSQGCTLVYTNIRNFKTDIKRFKPQHMVGVPRLWDSIYEGIQKQLREKSDTQQKIAQFF 299
Query: 181 IRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKI 240
IS + +RI + L + + ID A++ L PLH L +KLVY KI
Sbjct: 300 FNISQNFILSRRIADNMSLEH------FDASAIDRFIAKLKTIFLAPLHGLGDKLVYSKI 353
Query: 241 QSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVG 299
+ +G + + +SGGGSL H+D FYE I V V VGYGLTE+SPV AR + N+ GS G
Sbjct: 354 REGLGGNFETLMSGGGSLAKHLDDFYEIINVPVLVGYGLTETSPVSNARTHSHNLRGSSG 413
Query: 300 HPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDI 359
PI HTEIKIVD +T E + G +G+V +RG QVMQGY+K P AT +A+D +GW N+GD+
Sbjct: 414 QPIPHTEIKIVDLDTGEAVSRGKRGVVLIRGPQVMQGYYKKPEATAKAIDPEGWFNSGDL 473
Query: 360 GWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQ 419
GWI P + LV+ GRAKDTIVL+ GEN+EP +E+A +RS I Q++++GQ
Sbjct: 474 GWITPMND----------LVITGRAKDTIVLNNGENIEPQPIEDACVRSPYIDQMMLVGQ 523
Query: 420 DQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTI--SLLYGE 464
DQ+ GA+IVP+ + + K + SE + +TI S LYG+
Sbjct: 524 DQKALGALIVPNLDALQTWGKNQQLNLTFPSEDASRETIINSDLYGK 570
>gi|220910327|ref|YP_002485638.1| AMP-dependent synthetase/ligase [Cyanothece sp. PCC 7425]
gi|219866938|gb|ACL47277.1| AMP-dependent synthetase and ligase [Cyanothece sp. PCC 7425]
Length = 684
Score = 368 bits (945), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 198/445 (44%), Positives = 281/445 (63%), Gaps = 32/445 (7%)
Query: 60 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGY 119
D+AT +YTSGTTG PKGVML+H NLLHQ+ SL ++ + GD+ LS+LP WH YERAC Y
Sbjct: 227 DLATLIYTSGTTGKPKGVMLSHGNLLHQVTSLGTVIQPQAGDRVLSILPTWHSYERACEY 286
Query: 120 FIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARA 179
F+FS G +YT +R++K D++R +P YM++VP ++E++Y G+Q+Q A+++ +
Sbjct: 287 FLFSLGCTQIYTNLRHIKQDIKRVKPQYMVAVPRLWESIYEGVQRQFREQPASKQKLINF 346
Query: 180 LIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKK 239
+ IS Y R+ G L + PS L+ A+I +L PLH L EK+VY+K
Sbjct: 347 FLGISQRYIKASRLRAGLDL--DNLHPSGGQKLL----AQIQVLLLRPLHQLGEKIVYQK 400
Query: 240 IQSAIG-ISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSV 298
++ A G K +SGGGSL H+++FYE IGV++ VGYGLTE+SPV+ ARRP N+ GS
Sbjct: 401 VREATGGCLKQVISGGGSLARHLEVFYEMIGVEILVGYGLTETSPVLTARRPWENLRGSA 460
Query: 299 GHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGD 358
G P+ +TEIKIVD E+ L G KG+V RG Q+MQGY+ P AT + LD +GW +TGD
Sbjct: 461 GKPVPYTEIKIVDPESRATLSLGEKGLVMARGPQIMQGYYGKPEATAKVLDSEGWFDTGD 520
Query: 359 IGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIG 418
+GW+ LVL GR KDTIVL+ GEN+EP +E+A LRS+ I QI+++G
Sbjct: 521 VGWLTDRQD----------LVLTGRQKDTIVLTNGENIEPQPIEDACLRSAYIDQIMLVG 570
Query: 419 QDQRRPGAIIVPDKE--EVLMAAKRLSIVHADASELSKEKTISL-------LYGEL--RK 467
QDQR GA+IVP+ E E A++ ++ D +K + I L LY + R+
Sbjct: 571 QDQRVLGALIVPNLEALEQWAASQNYALKLPDREPQTKGEMIDLDSKPVQDLYRQELNRE 630
Query: 468 WTSKCSF----QIGPIHVVDEPFTV 488
++ F +IGP + EPF++
Sbjct: 631 VKNRPGFRIDDRIGPFKFILEPFSI 655
>gi|427719825|ref|YP_007067819.1| long-chain-fatty-acid--CoA ligase [Calothrix sp. PCC 7507]
gi|427352261|gb|AFY34985.1| Long-chain-fatty-acid--CoA ligase [Calothrix sp. PCC 7507]
Length = 658
Score = 368 bits (944), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 205/503 (40%), Positives = 297/503 (59%), Gaps = 49/503 (9%)
Query: 3 FIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIA 62
+ILL S AP E + V ++ +++++G A+ + +D+A
Sbjct: 159 LVILL----SDEAPPTEESLKVLNFSQLMEVG------------AQHTLQPVKQNREDLA 202
Query: 63 TYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIF 122
T +YTSGTTG PKGVML+H NLLHQ+ +V E GD LS+LP WH YER YF+
Sbjct: 203 TLIYTSGTTGKPKGVMLSHDNLLHQVTVFGVVVQPEVGDTVLSILPSWHSYERTVEYFLL 262
Query: 123 SRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIR 182
S+G +YT +R++K DL+ ++PHYM+ VP ++E++Y G QKQ A ++ + +L+
Sbjct: 263 SQGCTQVYTNLRSVKKDLREFKPHYMVGVPRLWESIYEGAQKQFREQPAKKQRLINSLLG 322
Query: 183 ISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQS 242
S Y +RI + L + I+ L ARI + L+PLH L EKLVY K++
Sbjct: 323 TSEKYIKAQRIAQKLDLEH------LDASAIEQLTARIQASALFPLHALGEKLVYAKVRE 376
Query: 243 AIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHP 301
A G K +SGGG+LP HID F+E IGV++ GYGLTE+SPV RRP+ N++G+ G P
Sbjct: 377 ATGGRVKQMISGGGALPKHIDNFFEIIGVQILQGYGLTETSPVTHVRRPSRNLIGASGQP 436
Query: 302 INHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGW 361
+ TE KIVD ET LP G +G+V ++G Q+M+GY++NP AT +A+D GW ++GD+GW
Sbjct: 437 LPATETKIVDPETRVPLPTGKRGLVLLKGPQIMEGYYQNPEATAKAIDPQGWFDSGDLGW 496
Query: 362 IAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQ 421
+ P + LVL GRAKDTIVL+ GEN+EP +E+A LRS + QI+++GQDQ
Sbjct: 497 LTPQND----------LVLTGRAKDTIVLTNGENIEPQPIEDACLRSPYVDQIMLVGQDQ 546
Query: 422 RRPGAIIVPDKEEVLMAA--KRLSIV-----HADAS----ELSKEKTISLLYGELRKWTS 470
R GA+IVP+ E + A + LSI ADAS +L + L EL +
Sbjct: 547 RSLGALIVPNVEALAKWAETQNLSISIQDDNVADASSQKIDLESKIIQDLFRQELNREVQ 606
Query: 471 -----KCSFQIGPIHVVDEPFTV 488
+ +I ++ EPF++
Sbjct: 607 NRPGYRADDRISSFRLIPEPFSI 629
>gi|354566187|ref|ZP_08985360.1| Long-chain-fatty-acid--CoA ligase [Fischerella sp. JSC-11]
gi|353546695|gb|EHC16143.1| Long-chain-fatty-acid--CoA ligase [Fischerella sp. JSC-11]
Length = 659
Score = 367 bits (942), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 197/446 (44%), Positives = 278/446 (62%), Gaps = 33/446 (7%)
Query: 60 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGY 119
D+AT +YTSGTTG PKGVMLTH+NL+HQI ++ +V GD LS+LP WH YER+C Y
Sbjct: 200 DLATLIYTSGTTGKPKGVMLTHRNLMHQIVAIPVVVQPRPGDIVLSILPTWHSYERSCEY 259
Query: 120 FIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARA 179
F+ S+G +YT +R++K DL+ YQPHYM++VP + E++Y G QKQ A+R+ +
Sbjct: 260 FLLSQGCTQVYTNLRSIKRDLKEYQPHYMVAVPRLLESIYEGAQKQFREQPASRQRLINF 319
Query: 180 LIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKK 239
I Y +R G L PS + D L A + A L PL+ L EKLVY K
Sbjct: 320 FFEIGEKYIKARRTLTGLNL--ENLNPS----MGDRLTASLQVAALSPLYALGEKLVYSK 373
Query: 240 IQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSV 298
++ A G K +SGGG+LP H+D F+E +GV++ VGYGLTE+SPV ARR N+ G+
Sbjct: 374 VREATGGRVKQMISGGGALPKHVDDFFEILGVEILVGYGLTETSPVTHARRHWRNLRGAA 433
Query: 299 GHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGD 358
G PI TE KIVD ET + LP G +G+V +RG Q+MQGY++NP AT +A+D +GW ++GD
Sbjct: 434 GQPIPGTETKIVDPETKKELPTGERGLVLLRGPQIMQGYYQNPEATAKAIDPEGWFDSGD 493
Query: 359 IGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIG 418
+GW+ P + L+L GRAKDTIVL+ GEN+EP +E+A LRS I QI+++G
Sbjct: 494 LGWVTPQND----------LILTGRAKDTIVLTNGENIEPQPIEDACLRSPYIDQIMLVG 543
Query: 419 QDQRRPGAIIVPDKE--EVLMAAKRL-------SIVHADASELSKEKTI--SLLYGELRK 467
QD++ GA+IVP+ E E A+ L ++ A + +++ E I L EL +
Sbjct: 544 QDRKSLGALIVPNLEALEKWAASGNLQLTIEDENVTAATSQKINLESKIIQDLFRQELNR 603
Query: 468 WTS-----KCSFQIGPIHVVDEPFTV 488
+ +IGP ++ EPF++
Sbjct: 604 EVQNRPGYRPDDRIGPFKLILEPFSI 629
>gi|172036048|ref|YP_001802549.1| long-chain-fatty-acid CoA ligase [Cyanothece sp. ATCC 51142]
gi|354552853|ref|ZP_08972160.1| Long-chain-fatty-acid--CoA ligase [Cyanothece sp. ATCC 51472]
gi|171697502|gb|ACB50483.1| probable long-chain-fatty-acid CoA ligase [Cyanothece sp. ATCC
51142]
gi|353554683|gb|EHC24072.1| Long-chain-fatty-acid--CoA ligase [Cyanothece sp. ATCC 51472]
Length = 638
Score = 367 bits (942), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 205/505 (40%), Positives = 294/505 (58%), Gaps = 49/505 (9%)
Query: 1 MRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDD 60
++ IILL S P + I +Y ++++ G A + T DD
Sbjct: 136 LQLIILL----SDETPKTDDSIKTLNYSQLMEQG------------ANNTLQPITKEDDD 179
Query: 61 IATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF 120
+AT +YTSGTTG PKG ML+H NLLHQ+++L I+ + GD LS+LP WH YER+ YF
Sbjct: 180 LATLIYTSGTTGQPKGAMLSHGNLLHQVKNLDAIIQPKAGDIVLSILPSWHSYERSAEYF 239
Query: 121 IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARAL 180
+ S+G L YT +RN K DL++++PH+M+ VP ++++LY GIQKQ+ S ++ + +
Sbjct: 240 LLSQGCTLTYTNIRNFKTDLKKFKPHHMVGVPRLWDSLYEGIQKQLRDQSPTQQKIVQFF 299
Query: 181 IRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKI 240
+S + +RI L + + + AR+ ++L PLH L +KLVY KI
Sbjct: 300 FNLSQTFILSRRIANNMSLEH------FDASGTERFIARLKASLLAPLHSLGDKLVYNKI 353
Query: 241 QSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVG 299
+ +G + + VSGGGSL H+D FYE I V V VGYGLTE+SPV AR + N+ GS G
Sbjct: 354 REGLGGNFETLVSGGGSLAKHLDDFYEIINVPVLVGYGLTETSPVTNARTHSHNLRGSSG 413
Query: 300 HPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDI 359
PI TEIKIVD +T E L G KG+V +RG QVMQGY+K P AT +A++ +GW N+GD+
Sbjct: 414 QPIPKTEIKIVDLDTGEPLSQGKKGVVLIRGPQVMQGYYKKPEATAKAINSEGWFNSGDL 473
Query: 360 GWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQ 419
GWI P + LV+ GRAKDTIVLS GEN+EP +E+A +RS+ I Q++++GQ
Sbjct: 474 GWITPMND----------LVITGRAKDTIVLSNGENIEPQPIEDACVRSAYIDQMMLVGQ 523
Query: 420 DQRRPGAIIVPDKEEVLMAAK----RLSIVHADA-------SELSKEKTISLLYGELRKW 468
DQ+ GA+IVP+ + + K L+ DA S+L + L EL +
Sbjct: 524 DQKALGALIVPNLDALQTWGKNQQLNLTFPPEDASREAIVNSDLYGKPVQDLFKQELNRE 583
Query: 469 TS-----KCSFQIGPIHVVDEPFTV 488
+ QI ++ EPF+V
Sbjct: 584 VKNRPGYRADDQIKAFELILEPFSV 608
>gi|428201789|ref|YP_007080378.1| AMP-forming long-chain acyl-CoA synthetase [Pleurocapsa sp. PCC
7327]
gi|427979221|gb|AFY76821.1| AMP-forming long-chain acyl-CoA synthetase [Pleurocapsa sp. PCC
7327]
Length = 638
Score = 367 bits (941), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 191/423 (45%), Positives = 269/423 (63%), Gaps = 29/423 (6%)
Query: 12 SSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTT 71
S +P+ E + + ++ ++++LG + N R+ + +AT +YTSGTT
Sbjct: 143 SDESPNANEPLKILNFKQLLELGESH-----NLNPIRQDRQT-------LATLIYTSGTT 190
Query: 72 GNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYT 131
G PKGVML+H NLLHQ+ +L ++ E GD+ LS+LP WH YER+ YFI S G +YT
Sbjct: 191 GKPKGVMLSHGNLLHQVTNLIAVLQPEPGDRVLSILPSWHCYERSGEYFILSHGCTQIYT 250
Query: 132 AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFK 191
+R+ K+DL+R++PHYMI VP ++E+LY +QKQ+ +++ +A + IS Y K
Sbjct: 251 NIRSFKNDLKRFKPHYMIGVPRLWESLYEAVQKQLREQPESKQRLANFFLGISTRYIMAK 310
Query: 192 RIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAG 250
R +G L PS + A+I +L PLH L ++LVY+KI+ A G + K
Sbjct: 311 RTEQGLNL--ENLNPSG----GERFMAKITANLLAPLHALGDRLVYQKIRQATGGNVKTL 364
Query: 251 VSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIV 310
+SGGG+L MH+D FYE IGV + VGYGLTE+SPV AR N+ GS G PI TEI+IV
Sbjct: 365 ISGGGALAMHLDNFYEIIGVPLVVGYGLTETSPVTNARTLKHNLRGSAGKPIPETEIRIV 424
Query: 311 DAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGR 370
D +T + LP KGIV +RG QVMQGY+K P AT + +D +GW ++GD+GW+ P +
Sbjct: 425 DPDTRQTLPPTQKGIVLIRGPQVMQGYYKKPEATAKVIDAEGWFDSGDLGWVTPAND--- 481
Query: 371 SRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVP 430
LVL GRAKDTIVLS GEN+EP +E+A +RS I QI+++GQDQ+ GA+IVP
Sbjct: 482 -------LVLTGRAKDTIVLSNGENIEPQPIEDACIRSPYIDQIMLVGQDQKALGALIVP 534
Query: 431 DKE 433
+ E
Sbjct: 535 NLE 537
>gi|81299727|ref|YP_399935.1| long-chain-fatty-acid CoA ligase [Synechococcus elongatus PCC 7942]
gi|81168608|gb|ABB56948.1| long-chain-fatty-acid CoA ligase [Synechococcus elongatus PCC 7942]
Length = 649
Score = 366 bits (940), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 189/433 (43%), Positives = 275/433 (63%), Gaps = 18/433 (4%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 118
D +AT +YTSGTTG PKGVML+H NLLHQ+ +L +V + GD LS+LP WH YERAC
Sbjct: 202 DRLATLIYTSGTTGPPKGVMLSHGNLLHQVTTLGVVVQPQPGDTVLSILPTWHSYERACE 261
Query: 119 YFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 178
YF+ S+G +YT +RN+K D+++Y+P +M+SV ++E++Y G+QKQ A +R +
Sbjct: 262 YFLLSQGCTQVYTTLRNVKQDIRQYRPQFMVSVLRLWESIYEGVQKQFREQPAKKRRLID 321
Query: 179 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 238
+S Y +R ++G L + P+ +A R++ L PLH L ++LVY
Sbjct: 322 TFFGLSQRYVLARRRWQGLDLLALNQSPAQRLA----EGVRMLA--LAPLHKLGDRLVYG 375
Query: 239 KIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 297
K++ A G + +SGGGSL +H+D F+E +GV + VGYGLTE+SPV+ RRP N+ GS
Sbjct: 376 KVREATGGRIRQVISGGGSLALHLDTFFEIVGVDLLVGYGLTETSPVLTGRRPWHNLRGS 435
Query: 298 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 357
G PI T I+IVD ET E P+G +G+V +G Q+MQGYF P AT +A+D +GW +TG
Sbjct: 436 AGQPIPGTAIRIVDPETKENRPSGDRGLVLAKGPQIMQGYFNKPEATAKAIDAEGWFDTG 495
Query: 358 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 417
D+G+I G LVL GRAKDTIVL+ GEN+EP +E+A LRSS I QI+++
Sbjct: 496 DLGYIVGE----------GNLVLTGRAKDTIVLTNGENIEPQPIEDACLRSSYISQIMLV 545
Query: 418 GQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTS-KCSFQI 476
GQD++ GA+IVP++E + + A I D + ++ L E+R + +I
Sbjct: 546 GQDRKSLGALIVPNQEAIALWASEQGISQTDLQGVVQKLIREELNREVRDRPGYRIDDRI 605
Query: 477 GPIHVVDEPFTVN 489
GP +++EPF++
Sbjct: 606 GPFRLIEEPFSME 618
>gi|254411063|ref|ZP_05024841.1| AMP-binding enzyme, putative [Coleofasciculus chthonoplastes PCC
7420]
gi|196182418|gb|EDX77404.1| AMP-binding enzyme, putative [Coleofasciculus chthonoplastes PCC
7420]
Length = 655
Score = 366 bits (940), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 204/465 (43%), Positives = 279/465 (60%), Gaps = 39/465 (8%)
Query: 1 MRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETI--GS 58
++ +ILL S PD E+ + ++ ++++ G K++ ++ I
Sbjct: 155 IQLVILL----SDQEPDAESELNILNFPQVLERG--------------KNHTFQPIEQAP 196
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 118
D +AT VYTSGTTG PKGVML+H NLLHQ+ SL IV E GD+ LS+LP WHVYERA
Sbjct: 197 DTLATLVYTSGTTGKPKGVMLSHGNLLHQVTSLGAIVQLEAGDRVLSILPTWHVYERAIE 256
Query: 119 YFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 178
YF S+G L+YT +R++K DL P+Y +SVP + E++Y +QKQ+ SA ++ +
Sbjct: 257 YFALSQGCTLIYTTLRHVKRDLNAQHPNYFVSVPRLLESIYETVQKQLSKESARKQRLVN 316
Query: 179 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 238
L IS + +R+ G L +QPS LWAR+ L +H+LA++ +Y+
Sbjct: 317 ILFSISDRFIKARRLVHGLSL--EHQQPSGF----QRLWARLQWLTLVLIHVLADQFIYQ 370
Query: 239 KIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 297
KI+ IG + K + GGG+L +D FYE IG++V GYGLTE+SPV+ ARR N+ GS
Sbjct: 371 KIREQIGANLKQTICGGGALSQKLDDFYEIIGIEVLEGYGLTETSPVLTARRSWHNLRGS 430
Query: 298 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 357
G PI TEI+IVD +T E L G KG+V RGSQ+MQGY++NP AT + +D GW NT
Sbjct: 431 AGKPILETEIRIVDPDTRETLLQGEKGLVWARGSQIMQGYYRNPEATDKVIDAQGWFNTE 490
Query: 358 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 417
D+GW+ LVL GRAKDTIVLS GENVEP +E A +RS I Q+VV+
Sbjct: 491 DLGWLTVQED----------LVLTGRAKDTIVLSNGENVEPKPIENACMRSRYIDQMVVV 540
Query: 418 GQDQRRPGAIIVP--DKEEVLMAAKRLSIVHADASELSKEKTISL 460
GQDQR GA+IVP D + A + + D S E+TI L
Sbjct: 541 GQDQRSLGALIVPNFDNLQGWAAENQYHLQLPDGESASGEETIDL 585
>gi|428774560|ref|YP_007166348.1| AMP-dependent synthetase and ligase [Cyanobacterium stanieri PCC
7202]
gi|428688839|gb|AFZ48699.1| AMP-dependent synthetase and ligase [Cyanobacterium stanieri PCC
7202]
Length = 636
Score = 365 bits (938), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 198/485 (40%), Positives = 289/485 (59%), Gaps = 51/485 (10%)
Query: 23 PVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSD--DIATYVYTSGTTGNPKGVMLT 80
PV+++ I+DLG + + I D D+AT +YTSGTTG PKGVML+
Sbjct: 156 PVYNFFSIMDLGVQG--------------SFTPIKGDIDDLATLIYTSGTTGKPKGVMLS 201
Query: 81 HKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDL 140
H+NLLHQ+R+L I+ GD+ L++LP WH YERA YF+ SRG L+YT++R K DL
Sbjct: 202 HRNLLHQVRNLETIIQPSKGDRILTILPSWHSYERAAEYFLLSRGTTLIYTSIRYFKQDL 261
Query: 141 QRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLT 200
+ Y+P+YM+ VP ++E++Y G+QK F S +++V + +S Y KR G L
Sbjct: 262 KDYKPNYMVGVPRLWESIYEGVQKN-FRDSGKQKLV-NFFLGMSQGYLDGKRAQSGLDL- 318
Query: 201 RNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPM 259
PS + D + + +P H+L +KLVY K++ +G S KA +SGGGSL
Sbjct: 319 -QNLNPSGM----DKFVGTLKTIVFYPFHILGDKLVYTKVREGVGNSIKAWISGGGSLAK 373
Query: 260 HIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLP 319
HID F++ + + + VGYGLTE+SPV ARR N++G+ G P+ TEI I ET LP
Sbjct: 374 HIDNFFQIVNIPLLVGYGLTETSPVTNARRMNRNIVGASGQPLPETEIMIAHPETKTPLP 433
Query: 320 AGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLV 379
G KG+V +RG+QVMQGY+K P AT +A++EDGW ++GD+GW+ P + LV
Sbjct: 434 QGEKGLVFIRGTQVMQGYYKKPEATAKAINEDGWFDSGDLGWVTPDND----------LV 483
Query: 380 LEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAA 439
+ GRAKDTIVLS GEN+EP LE+ LRS+ + QI+++GQDQ+ GA+IVP+ E + A
Sbjct: 484 ITGRAKDTIVLSNGENIEPQPLEDVCLRSAYVDQIMLVGQDQKYLGALIVPNLEALSAWA 543
Query: 440 KRLSIV-----------HADASELSKEKTISLLYGELRKWTS-----KCSFQIGPIHVVD 483
K + + S+L ++ +SL EL + + +I ++
Sbjct: 544 KENKVSLKIPDTGASREEVENSDLYSKEVMSLFKQELNREVKNRPGYRPDDRIAVFELIL 603
Query: 484 EPFTV 488
EPF++
Sbjct: 604 EPFSI 608
>gi|254411220|ref|ZP_05024997.1| AMP-binding enzyme, putative [Coleofasciculus chthonoplastes PCC
7420]
gi|196181721|gb|EDX76708.1| AMP-binding enzyme, putative [Coleofasciculus chthonoplastes PCC
7420]
Length = 672
Score = 365 bits (938), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 193/432 (44%), Positives = 275/432 (63%), Gaps = 33/432 (7%)
Query: 1 MRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDD 60
++F+ILL S P +++ VF++ +++ +G S+ R+
Sbjct: 168 IQFVILL----SDEEPPAEDKLKVFNFSQVMSMG--SKATLQPIQATRQ----------T 211
Query: 61 IATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF 120
+AT +YTSGTTG PKGVMLTH NLLHQ+ + ++ + GD+ LS+LP WHVYER YF
Sbjct: 212 LATLMYTSGTTGKPKGVMLTHGNLLHQVTTFGIVLQPKGGDRILSILPTWHVYERTVEYF 271
Query: 121 IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARAL 180
+ S+G +YT +R++K DL+ ++P YMI VP ++E++Y G+QKQ ++ + L
Sbjct: 272 LLSQGCTQIYTTIRHVKADLKAFKPIYMIGVPRLWESIYDGVQKQFREQPPNKQKLVFTL 331
Query: 181 IRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKI 240
+ IS Y +RI +G L NQ PS L + L A I +L P H LA+KL+Y+ +
Sbjct: 332 LDISQRYIKARRIAQGLDL--NQLNPSPL----ERLSASIQALLLLPAHKLADKLIYQTV 385
Query: 241 QSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVG 299
+ A G K +SGGGSL MH++ F+E G+++ VGYGLTE+SPV RR N+ S G
Sbjct: 386 REATGGQIKTIISGGGSLAMHLENFFEIAGIEILVGYGLTETSPVTNVRRMERNLRRSSG 445
Query: 300 HPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDI 359
P+ T+I+IVD ET + LP G +G+V V+G QVMQGY+KNP AT +A+D DGW +TGD+
Sbjct: 446 LPMPGTQIRIVDPETRKPLPIGEQGLVLVKGPQVMQGYYKNPEATAKAIDSDGWFDTGDL 505
Query: 360 GWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQ 419
GW+ P+H LVL GRAKDTIVL+ GEN+EP +E+A LRS I QI+++GQ
Sbjct: 506 GWVTPNHD----------LVLTGRAKDTIVLTNGENIEPQPIEDACLRSPYIDQIMLVGQ 555
Query: 420 DQRRPGAIIVPD 431
DQR GA+IVP+
Sbjct: 556 DQRSLGALIVPN 567
>gi|428301191|ref|YP_007139497.1| AMP-dependent synthetase and ligase [Calothrix sp. PCC 6303]
gi|428237735|gb|AFZ03525.1| AMP-dependent synthetase and ligase [Calothrix sp. PCC 6303]
Length = 658
Score = 365 bits (937), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 204/506 (40%), Positives = 306/506 (60%), Gaps = 51/506 (10%)
Query: 1 MRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYET-IGSD 59
++F ILL S P E + + ++++II LG + H T +
Sbjct: 157 IKFAILL----SEETPPPEESLKILNFEQIITLGGQ-------------HTLIPTQLKRT 199
Query: 60 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGY 119
D+AT +YTSGTTG PKGVML H N++HQ+ SL +V E GD LS+LP WH YER+C Y
Sbjct: 200 DLATLIYTSGTTGKPKGVMLNHGNIMHQVTSLGSVVQPEKGDTVLSILPSWHSYERSCEY 259
Query: 120 FIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARA 179
F+FS+G +YT++R++K+DL++++P+Y+I+VP + E++Y G+QKQ +++ + +
Sbjct: 260 FLFSQGCMQIYTSLRSIKNDLKKFKPNYIIAVPRLLESIYEGVQKQFREQPPSKQKLVKN 319
Query: 180 LIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKK 239
L IS Y +RI +G L + QPS L D + A+I L PLH + EKLVY K
Sbjct: 320 LFAISEKYIKAQRIVQGVSL--DNFQPSVL----DKITAQIQSIFLAPLHAVGEKLVYGK 373
Query: 240 IQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSV 298
++ A G K VSGGG+LP ++D F+E +GV++ VGYGLTE+SPV RR N+ G+
Sbjct: 374 VREATGGKVKQMVSGGGALPRYVDNFFEIVGVEIFVGYGLTETSPVTHVRRSWRNLRGAA 433
Query: 299 GHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGD 358
G I TE+KIV ET + + G +G+V +RG Q+MQGY++NP AT +A+D +GW ++GD
Sbjct: 434 GLAIPGTEVKIVHPETRKPIENGQRGLVLLRGPQIMQGYYQNPEATAKAIDSEGWFDSGD 493
Query: 359 IGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIG 418
+GW++ + L+L GRAKDTIVL+ GEN+EP +E+A LRS I QI+++G
Sbjct: 494 LGWVSDKND----------LILTGRAKDTIVLTNGENIEPQPIEDACLRSPYIDQIMLVG 543
Query: 419 QDQRRPGAIIVPDKEEVLMAAKRLSI---VHADASELSKEKTIS--------LLYGELRK 467
QDQR GA+IVP+ E + A+ ++ + D LS + I+ L EL +
Sbjct: 544 QDQRSIGALIVPNLEALAKWAQEHNLDLCIQEDNVTLSGSQKINLESKIIQDLFRQELNR 603
Query: 468 WTS-----KCSFQIGPIHVVDEPFTV 488
+ +I P ++ EPF++
Sbjct: 604 EVQNRPGYRPDDRINPFRLILEPFSM 629
>gi|75909380|ref|YP_323676.1| AMP-dependent synthetase and ligase [Anabaena variabilis ATCC
29413]
gi|75703105|gb|ABA22781.1| AMP-dependent synthetase and ligase [Anabaena variabilis ATCC
29413]
Length = 658
Score = 364 bits (934), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 199/491 (40%), Positives = 299/491 (60%), Gaps = 45/491 (9%)
Query: 15 APDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNP 74
P + + V ++ ++I++G + AF R D++AT +YTSGTTG P
Sbjct: 167 TPPTEQSLKVLNFLQLIEVG--TNHAFVPVKRKR----------DELATLIYTSGTTGKP 214
Query: 75 KGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVR 134
KGVML++ NLLHQ+ + +V + GD LS+LP WH YER Y++ S+G +YT +R
Sbjct: 215 KGVMLSYSNLLHQVTTFRVVVQPKVGDTALSILPSWHSYERTVEYYLLSQGCTQIYTNLR 274
Query: 135 NLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIY 194
++K DL++Y+P+YM++VP ++E++Y G+QKQ A ++ + + L+ +S Y +RI
Sbjct: 275 SVKADLKQYKPNYMVAVPRLWESIYEGVQKQFREQPANKQRLIKFLLGMSEKYIKAQRIA 334
Query: 195 EGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSG 253
+G L + S L LI A+++ P H+L +KLVY K++ A G K +SG
Sbjct: 335 QGTSL--DHLHASSLERLI----AKVLELAFLPFHVLGQKLVYGKVKEATGGRFKQVISG 388
Query: 254 GGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAE 313
GG+LP HID F+E IGV++ GYGLTE+SPV RRP N +G+ G PI TE+KIVD E
Sbjct: 389 GGALPKHIDTFFEIIGVQILQGYGLTETSPVTNVRRPWRNFIGTSGQPIPGTEVKIVDPE 448
Query: 314 TNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRR 373
T + LP G +G+V ++G QVMQGY++NP AT +A+D GW ++GD+GW+ P +
Sbjct: 449 TRQPLPVGQRGLVLLKGPQVMQGYYQNPEATAKAIDPQGWFDSGDLGWVTPDNE------ 502
Query: 374 CGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 433
LVL GRAKDTIVLS GEN+EP +E+A LRS I QI+++GQDQR GA+IVP+ E
Sbjct: 503 ----LVLTGRAKDTIVLSNGENIEPQPIEDACLRSPYIDQIMLVGQDQRSIGALIVPNVE 558
Query: 434 EVLMAAKRLSI---VHADASELSKEKTISL----LYGELRKWTS---------KCSFQIG 477
+ A+ ++ V D S + I+L + G R+ + + ++G
Sbjct: 559 ALAKWAESQNLVLSVEDDNLTSSSSQKINLESKMIQGLFRQELNREVQNRPGYRPDDRVG 618
Query: 478 PIHVVDEPFTV 488
P ++ EPF++
Sbjct: 619 PFKLILEPFSI 629
>gi|170077298|ref|YP_001733936.1| long-chain-fatty-acid CoA ligase [Synechococcus sp. PCC 7002]
gi|169884967|gb|ACA98680.1| long-chain-fatty-acid CoA ligase (AMP-forming) [Synechococcus sp.
PCC 7002]
Length = 647
Score = 364 bits (934), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 183/414 (44%), Positives = 258/414 (62%), Gaps = 29/414 (7%)
Query: 21 EIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLT 80
E+P+F++ +++ LG + + D+ T +YTSGTTG PKGVML+
Sbjct: 160 ELPIFNFSQLMTLGSQEPLTMPGRS------------PQDLMTLIYTSGTTGKPKGVMLS 207
Query: 81 HKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDL 140
H N+L+Q+R+L ++ GD LS+LP WH YERA YF+ S+G +YT +RN+K DL
Sbjct: 208 HGNVLYQVRNLDQVIQPNPGDVTLSILPTWHSYERAAEYFLLSQGCTQIYTNIRNIKKDL 267
Query: 141 QRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLT 200
Q Y+P YM++VP ++E++Y G+QK + A ++ + + S Y +RI L
Sbjct: 268 QTYKPGYMVAVPRIWESIYEGVQKNLREQPAKKQKLVNFFLTCSQNYVLAQRIANNLSLE 327
Query: 201 RNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPM 259
+ V+ + L AR L+P HLL KLVY+KI+ A G + +SGGGSL
Sbjct: 328 H------FHVSSLTRLMARAKAIALYPFHLLGNKLVYEKIRGATGGKIRYVISGGGSLAQ 381
Query: 260 HIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLP 319
HID F+E +G+ + VGYGLTE+SPV ARRP NV GS G + TEI+IVD ET + L
Sbjct: 382 HIDTFFEIVGINILVGYGLTETSPVTNARRPERNVCGSAGPALKGTEIRIVDPETRQTLS 441
Query: 320 AGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLV 379
G KG+V +RG QVMQGY++ P AT +A+D +GW ++GD+GW+ P G LV
Sbjct: 442 QGQKGLVLIRGPQVMQGYYRKPEATAKAIDPEGWFDSGDLGWVTPQ----------GDLV 491
Query: 380 LEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 433
L GRAKDTIVL+ GEN+EP +E+A RS I QI+++GQDQ+ GA+IVP+ E
Sbjct: 492 LTGRAKDTIVLTNGENIEPQPIEDACARSPYIDQIMLVGQDQKSLGALIVPNLE 545
>gi|411117918|ref|ZP_11390299.1| AMP-forming long-chain acyl-CoA synthetase [Oscillatoriales
cyanobacterium JSC-12]
gi|410711642|gb|EKQ69148.1| AMP-forming long-chain acyl-CoA synthetase [Oscillatoriales
cyanobacterium JSC-12]
Length = 659
Score = 363 bits (931), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 184/413 (44%), Positives = 269/413 (65%), Gaps = 32/413 (7%)
Query: 22 IPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTH 81
I + ++ ++++LG + + N +R+ D+AT +YTSGTTG PKG ML+H
Sbjct: 168 IKILNFIQLMNLG--ANHSLQPVNRSRQ----------DLATLIYTSGTTGKPKGAMLSH 215
Query: 82 KNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQ 141
NLLHQ+ +L +V + GD+ LS+LP WH YER+ YF+ S+G +YT++R +K DL+
Sbjct: 216 GNLLHQVETLGAVVQPKLGDRVLSILPTWHAYERSAEYFLLSQGCTQIYTSIRTVKKDLK 275
Query: 142 RYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGF-CLT 200
++P YM+SVP ++E++Y G+QKQ ++ + + IS Y +R++ L
Sbjct: 276 DFKPQYMVSVPRIWESVYEGVQKQFREQPEKKQKLIHFFLNISHRYIHARRVWNNLELLN 335
Query: 201 RNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAI--GISKAGVSGGGSLP 258
R P L+AL A+I+ IL PLH L EK+VY K++ A G + +SGGGSL
Sbjct: 336 REPSLPVRLLAL-----AQIV--ILAPLHALGEKIVYSKVREAATGGQFRQAISGGGSLA 388
Query: 259 MHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVL 318
HID F+E +G++V VGYGLTE+SPV ARRP N+ GS G PI TEI+IVD E+ + L
Sbjct: 389 RHIDDFFEIMGIEVLVGYGLTETSPVTNARRPWRNLRGSAGQPIPGTEIRIVDPESRKPL 448
Query: 319 PAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVL 378
P G +G+V +RG Q+MQGY+ NP AT++A+D +GW ++GD+GW+ + L
Sbjct: 449 PVGERGLVLIRGPQIMQGYYNNPEATRKAIDPEGWFDSGDLGWVTKEND----------L 498
Query: 379 VLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPD 431
VL GRAKDTIVL+ GEN+EP +E+A LRS+ I QI+++GQDQ+ GA+IVP+
Sbjct: 499 VLTGRAKDTIVLTNGENIEPQPIEDACLRSAYIDQIMLVGQDQKSLGALIVPN 551
>gi|443319050|ref|ZP_21048288.1| AMP-forming long-chain acyl-CoA synthetase [Leptolyngbya sp. PCC
6406]
gi|442781364|gb|ELR91466.1| AMP-forming long-chain acyl-CoA synthetase [Leptolyngbya sp. PCC
6406]
Length = 657
Score = 362 bits (929), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 193/447 (43%), Positives = 273/447 (61%), Gaps = 34/447 (7%)
Query: 60 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGY 119
D+AT +YTSGTTG PKGVM+ H+NLLHQI++L ++ GD+ L +LP WH + R Y
Sbjct: 198 DLATLIYTSGTTGQPKGVMIRHRNLLHQIQTLGAVIQPAIGDRVLGLLPTWHTFGRTAEY 257
Query: 120 FIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARA 179
FI+S+G Y+ +R +K D + +PH+M+ VP ++E++Y G+QKQ +++ + A
Sbjct: 258 FIYSQGCTQTYSNIRTIKADFKTVKPHFMVGVPRLWESIYEGVQKQFREQPESKQRLVNA 317
Query: 180 LIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKK 239
L+ S Y +R L P + +RI P HLL EKLVY K
Sbjct: 318 LLWHSQKYVENRRTANSLALDHPNASP------LRQFGSRIFSFAFLPGHLLGEKLVYSK 371
Query: 240 IQSAIG-ISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSV 298
++ A G KA +SGGGSL H+DLF+E I V V VGYGLTE+SPV++ARRP N+ G+
Sbjct: 372 VREATGGCVKALISGGGSLARHLDLFFEIINVPVLVGYGLTETSPVLSARRPWRNLRGAS 431
Query: 299 GHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGD 358
G PI TEI++VD ET++ LP G KG+V RG QVM+GY+KNP AT +ALD DGW +TGD
Sbjct: 432 GQPIPGTEIRVVDPETHQPLPLGQKGLVMARGPQVMEGYYKNPEATAKALDADGWFDTGD 491
Query: 359 IGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIG 418
+GWI + +VL GRAKDTIVL+ GEN+EP +E+A +RS I QI+++G
Sbjct: 492 LGWITRDAN----------IVLTGRAKDTIVLTNGENIEPQPIEDACIRSPYIDQIMLVG 541
Query: 419 QDQRRPGAIIVPDKEEVLMAAKRLSI---VHADASELSKE-KTIS--------LLYGELR 466
QDQR GA++VP+ + + A+ + V D++ + E +TIS L GEL
Sbjct: 542 QDQRSLGALVVPNLDALQKWAEPQGLYIEVPGDSTSIPPEFQTISLEDDRVQKLFRGELN 601
Query: 467 KWTS-----KCSFQIGPIHVVDEPFTV 488
+ ++GP +V EPF++
Sbjct: 602 AQVKDRPGYRPDDRVGPFRLVPEPFSI 628
>gi|17231094|ref|NP_487642.1| hypothetical protein alr3602 [Nostoc sp. PCC 7120]
gi|17132735|dbj|BAB75301.1| alr3602 [Nostoc sp. PCC 7120]
Length = 683
Score = 362 bits (928), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 191/447 (42%), Positives = 283/447 (63%), Gaps = 33/447 (7%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 118
+++AT +YTSGTTG PKGVML++ NLLHQ+ + +V + GD LS+LP WH YER
Sbjct: 224 NELATLIYTSGTTGKPKGVMLSYSNLLHQVTTFRVVVQPKVGDTALSILPSWHSYERTVE 283
Query: 119 YFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 178
Y++ S+G +YT +R++K DL++Y+P+YM++VP ++E++Y G+QKQ A ++ + +
Sbjct: 284 YYLLSQGCTQIYTNLRSVKADLKQYKPNYMVAVPRLWESIYEGVQKQFREQPANKQRLIK 343
Query: 179 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 238
L+ +S Y +RI +G L + S L LI A+++ P H+L +KLVY
Sbjct: 344 FLLGMSEKYIKAQRIAQGTSL--DHLHASSLERLI----AKVLEFAFLPFHVLGQKLVYG 397
Query: 239 KIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 297
K++ A G K +SGGG+LP HID F+E IGV++ GYGLTE+SPV RRP N +G+
Sbjct: 398 KVKEATGGRFKQVISGGGALPKHIDTFFEIIGVQILQGYGLTETSPVTNVRRPWRNFIGT 457
Query: 298 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 357
G PI TE+KIVD ET + LP G +G+V ++G QVMQGY++NP AT +A+D GW ++G
Sbjct: 458 SGQPIPGTEVKIVDPETRQPLPVGKRGLVLLKGPQVMQGYYQNPEATAKAIDPQGWFDSG 517
Query: 358 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 417
D+GW+ P + LVL GRAKDTIVLS GEN+EP +E+A LRS I QI+++
Sbjct: 518 DLGWVTPDNE----------LVLTGRAKDTIVLSNGENIEPQPIEDACLRSPYIDQIMLV 567
Query: 418 GQDQRRPGAIIVPDKEEVLMAAKRLSI---VHADASELSKEKTISL----LYGELRKWTS 470
GQDQR GA+IVP+ E + A+ ++ V D S + I+L + G R+ +
Sbjct: 568 GQDQRSIGALIVPNVEALAKWAESQNLVLSVEDDNLTSSSSQKINLESKMIQGLFRQELN 627
Query: 471 ---------KCSFQIGPIHVVDEPFTV 488
+ ++GP ++ EPF++
Sbjct: 628 REVQNRPGYRPDDRVGPFKLILEPFSI 654
>gi|409990099|ref|ZP_11273528.1| AMP-dependent synthetase and ligase [Arthrospira platensis str.
Paraca]
gi|291566551|dbj|BAI88823.1| probable long-chain-fatty-acid--CoA ligase [Arthrospira platensis
NIES-39]
gi|409939040|gb|EKN80275.1| AMP-dependent synthetase and ligase [Arthrospira platensis str.
Paraca]
Length = 647
Score = 362 bits (928), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 196/506 (38%), Positives = 296/506 (58%), Gaps = 45/506 (8%)
Query: 1 MRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDD 60
+RF++LL + + + IP+ ++ +++ G + T +D
Sbjct: 143 IRFVVLLSDEDITAEDSL--SIPIVNFSQLMTKGED-----------MTLLNPPTTKLED 189
Query: 61 IATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF 120
+AT +YTSGTTG PKGVMLTH+N LHQ+ ++ D++ + G+ LS+LP WH R+ Y+
Sbjct: 190 LATLLYTSGTTGKPKGVMLTHRNFLHQLITIADVIAPQPGEIVLSILPTWHSLGRSGQYY 249
Query: 121 IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARAL 180
SRG ++YT +R K DLQ ++P YM+SVP ++E++Y QKQ A R+ +
Sbjct: 250 FLSRGTMVIYTNIRYFKQDLQEFKPQYMVSVPRIWESIYEAAQKQFRDGPATRQKLVNFF 309
Query: 181 IRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKI 240
+S Y +RI + + + + AL A++ +L P+H L +KL+Y+K+
Sbjct: 310 FGMSNRYIEARRIVQKLTIPGQESNNNSSTAL-----AKLQTIVLTPVHALGDKLIYQKV 364
Query: 241 QSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVG 299
+ A+G K +SGGGSL MH++ FYE +G+ + VGYGLTE++PV+ ARRP N+ GS G
Sbjct: 365 RQAVGGKLKFAISGGGSLAMHLENFYEIVGIDLLVGYGLTETAPVLTARRPGHNLRGSAG 424
Query: 300 HPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDI 359
PI TEI+I+D ET + G KG+V RG QVM+GYF+NP AT +A+D +GW +TGD+
Sbjct: 425 RPIPETEIRIIDPETRQTYEPGHKGLVLARGPQVMRGYFQNPEATDKAIDPEGWFDTGDL 484
Query: 360 GWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQ 419
GW+ P LVL GRAKDTIVL+ GEN+EP +E+A +RS I QIV++GQ
Sbjct: 485 GWLTPQKD----------LVLTGRAKDTIVLTNGENIEPQPIEDACVRSPYIDQIVLVGQ 534
Query: 420 DQRRPGAIIVPDKEEVLMAAKRLSI---VHADASELSKEKTI--------SLLYGELR-K 467
DQ+ GA+IVP+ + + A + V + + E I SL EL +
Sbjct: 535 DQKSLGALIVPNLDALKQWASGQGLGLQVPGEEQQGEAENAIAIDSQPIQSLFRQELTLQ 594
Query: 468 WTSKCSF----QIGPIHVVDEPFTVN 489
++ SF +IGP ++ EPFT++
Sbjct: 595 VKNRPSFRPDDRIGPFRLILEPFTID 620
>gi|158338658|ref|YP_001519835.1| long-chain-fatty-acid-CoA ligase [Acaryochloris marina MBIC11017]
gi|158308899|gb|ABW30516.1| long-chain-fatty-acid-CoA ligase, putative [Acaryochloris marina
MBIC11017]
Length = 646
Score = 360 bits (925), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 187/405 (46%), Positives = 257/405 (63%), Gaps = 19/405 (4%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 118
+ +AT +YTSGT+G PKGVML+H NLLH I ++ V E GD+ LS+LP WH + R
Sbjct: 188 EHLATLIYTSGTSGKPKGVMLSHGNLLHIITAMPAAVQPEVGDRILSILPTWHSFGRLVD 247
Query: 119 YFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 178
Y+ S+G +YT++RNLK DLQ Y+PHYM SVP ++E+LY G+QK+ A R+ +
Sbjct: 248 YYFLSQGCTQIYTSIRNLKGDLQTYKPHYMGSVPRLWESLYEGMQKKFRGEPATRQKLIN 307
Query: 179 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 238
IS Y +R +G + N PS L + A++ L PLH L +++VY
Sbjct: 308 TFFGISQKYILARRTQQGLDI--NNLNPSGLQRFL----AQLQMLFLGPLHQLGDRIVYT 361
Query: 239 KIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 297
KI+ A+G K SGGGSL MH++ F+EA+G+++ VGYGLTE+SPV+ +RR N+ S
Sbjct: 362 KIRQAMGGQFKQSFSGGGSLAMHLETFFEAVGIELIVGYGLTETSPVLTSRRAEHNLRRS 421
Query: 298 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 357
G PI TEI+IVD +T + LP G +G+V VRG QVMQGY++NP AT + +D++GW +TG
Sbjct: 422 AGKPIPKTEIRIVDPQTRQTLPTGQQGLVIVRGPQVMQGYYQNPEATAKVIDQEGWFDTG 481
Query: 358 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 417
D+GW+ P LVL GRAKDTIVLS GEN+EP LE+A RSS I QI+V+
Sbjct: 482 DLGWLTPTQD----------LVLTGRAKDTIVLSNGENIEPQPLEDACARSSFIDQIMVV 531
Query: 418 GQDQRRPGAIIVP--DKEEVLMAAKRLSIVHADASELSKEKTISL 460
GQDQR GA+IVP D + + + SI H + K ++
Sbjct: 532 GQDQRSLGALIVPNLDALQQWASEQNASIQHPGNTPTPGSKVLTF 576
>gi|284928783|ref|YP_003421305.1| AMP-forming long-chain acyl-CoA synthetase [cyanobacterium UCYN-A]
gi|284809242|gb|ADB94947.1| AMP-forming long-chain acyl-CoA synthetase [cyanobacterium UCYN-A]
Length = 638
Score = 358 bits (919), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 191/434 (44%), Positives = 270/434 (62%), Gaps = 37/434 (8%)
Query: 1 MRFIILLWGKKSSVAPDIVEEIPV--FSYDEIIDLGRESRKAFSDSNDARKHYKYETIGS 58
+R IILL +KS++ EIPV ++ E++ LG+ D R K +T
Sbjct: 136 LRLIILLSNEKSNL------EIPVKVLNFTELMKLGKNF--------DLRSIVKKDT--- 178
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 118
D+AT +YTSGTTG PKG ML+H N+LHQIRSL I+ + GD+ LS+LP WH YER+
Sbjct: 179 -DLATLIYTSGTTGKPKGAMLSHGNILHQIRSLDTIIKPKPGDRILSILPSWHSYERSAE 237
Query: 119 YFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 178
YF+ S+G L+YT +RN K+DL++++PH+M+ VP ++E+LY IQKQ S A+ + +
Sbjct: 238 YFLLSQGCTLIYTNIRNFKNDLKKFKPHHMVGVPRLWESLYEVIQKQFREQSVAKEKIIK 297
Query: 179 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 238
S + +RI+ CL+ +PS+ + A I L+P+H LA+ LVY+
Sbjct: 298 YCFENSLKFIVCRRIFN--CLSLENLKPSFQTRAM----AFIKLIALYPIHKLADLLVYR 351
Query: 239 KIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 297
+I+ +G S K +SGGGSL H+D FYE I + + VGYGLTE+SPV AR N+ G+
Sbjct: 352 QIRDNLGGSFKTLISGGGSLAKHLDDFYEIIDIPILVGYGLTETSPVANARTHKHNLRGT 411
Query: 298 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 357
G PI TEI IVD T ++L G G++ +RG QVMQGY+K T + D GW ++G
Sbjct: 412 AGQPIAGTEINIVDPNTRQILSKGKCGLILIRGPQVMQGYYKKIEETNKVKDSQGWFDSG 471
Query: 358 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 417
D+GW+ P + LV+ GR KDTIVLS GEN+EP +E+A LRS I QI+++
Sbjct: 472 DLGWLTPMND----------LVITGRIKDTIVLSNGENIEPQPIEDACLRSVYIDQIMLV 521
Query: 418 GQDQRRPGAIIVPD 431
GQDQ+ GA+IVP+
Sbjct: 522 GQDQKMLGALIVPN 535
>gi|428216435|ref|YP_007100900.1| o-succinylbenzoate--CoA ligase [Pseudanabaena sp. PCC 7367]
gi|427988217|gb|AFY68472.1| o-succinylbenzoate--CoA ligase [Pseudanabaena sp. PCC 7367]
Length = 626
Score = 357 bits (917), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 198/484 (40%), Positives = 288/484 (59%), Gaps = 51/484 (10%)
Query: 20 EEIP--VFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGV 77
EE P ++Y ++ D G + D D + I D +AT +YTSGT+G PKGV
Sbjct: 150 EEPPEGAYNYQQVCDRGVDK-----DLGDPQ-------ITRDTLATLIYTSGTSGKPKGV 197
Query: 78 MLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLK 137
MLTH N+L Q+R +V GD+ LS+LP WH YER+C YF+FS+G+ +YT +R +K
Sbjct: 198 MLTHGNILTQVRGGTAMVKPFPGDRILSILPTWHSYERSCEYFLFSQGVTQIYTNLRKIK 257
Query: 138 DDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGF 197
+DL ++P YM++VP ++E++Y GIQ++ SA +R + L+ S Y +R+ G
Sbjct: 258 NDLATFKPQYMLAVPRLWESIYEGIQRKFDAESATKRKLINFLLNASNTYIKARRVVNGL 317
Query: 198 CLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGS 256
LT + L AR+ PL+ LA+KLV+ KI++ IG K SGGG+
Sbjct: 318 SLTGGNQ-----------LKARLTMFAYAPLYWLAKKLVFDKIRAGIGGEFKYICSGGGA 366
Query: 257 LPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNE 316
L H++LFYEA +++ VGYGLTE+SP++ ARRP N+ + G P+ EIKIVD ET E
Sbjct: 367 LQPHLELFYEAAQIEILVGYGLTETSPMVTARRPERNLRTTSGIPLPDAEIKIVDPETKE 426
Query: 317 VLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGG 376
P G +G+V RG +MQGY+KNP AT +A+D DGW NTGD+G++ +
Sbjct: 427 AFPPGKRGLVMARGPMIMQGYYKNPEATNKAIDADGWFNTGDLGFLTHKND--------- 477
Query: 377 VLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVL 436
L + GRAKDTIVLS GEN+EPL +E+A S+ I QI+++GQDQR+ GA+IVP+ L
Sbjct: 478 -LTITGRAKDTIVLSNGENIEPLSIEDACSSSTYIDQIMLVGQDQRQLGALIVPN----L 532
Query: 437 MAAKRLSIVHADA------SELSKEKTISLLYGELRKWTSKCSFQ-----IGPIHVVDEP 485
A + ++ AD+ L+++K ++ EL + Q IGP + EP
Sbjct: 533 KALEVDGLLPADSELAESIDLLNQDKIRNVFRSELTRKVQDRPGQSINDRIGPFEFLPEP 592
Query: 486 FTVN 489
F ++
Sbjct: 593 FDIS 596
>gi|359461826|ref|ZP_09250389.1| long-chain-fatty-acid-CoA ligase [Acaryochloris sp. CCMEE 5410]
Length = 646
Score = 357 bits (917), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 181/377 (48%), Positives = 247/377 (65%), Gaps = 17/377 (4%)
Query: 56 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYER 115
+G + +AT +YTSGT+G PKGVML+H NLLH I ++ V E GD+ LS+LP WH + R
Sbjct: 185 LGREHLATLIYTSGTSGKPKGVMLSHGNLLHIITAMPAAVQPEVGDRILSILPTWHSFGR 244
Query: 116 ACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 175
Y+ S+G +YT++RNLK DLQ Y+PHYM SVP ++E+LY G+QK+ A R+
Sbjct: 245 LVDYYFLSQGCTQIYTSIRNLKGDLQTYKPHYMGSVPRLWESLYEGMQKKFRGEPATRQK 304
Query: 176 VARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKL 235
+ IS Y +R + + N PS L + A++ L PLH L +++
Sbjct: 305 LINTFFGISQKYILARRTQQRLDI--NNLNPSGLQRFL----AQLQMLFLGPLHQLGDRI 358
Query: 236 VYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNV 294
VY KI+ A+G K SGGGSL MH++ F+E +G+++ VGYGLTE+SPV+ ARR N+
Sbjct: 359 VYTKIRQAMGGQFKQSFSGGGSLAMHLETFFETVGIELIVGYGLTETSPVLTARRAEHNL 418
Query: 295 LGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWL 354
S G PI TEI+IVD +T + LP G +G+V VRG QVMQGY++NP AT + +D++GW
Sbjct: 419 RRSAGKPIPKTEIRIVDPQTRQTLPTGQQGLVIVRGPQVMQGYYQNPEATAKVIDQEGWF 478
Query: 355 NTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQI 414
+TGD+GW+ P LVL GRAKDTIVLS GEN+EP LE+A RS+ I QI
Sbjct: 479 DTGDLGWLTPTQD----------LVLTGRAKDTIVLSNGENIEPQPLEDACARSAFIDQI 528
Query: 415 VVIGQDQRRPGAIIVPD 431
+V+GQDQR GA+IVP+
Sbjct: 529 MVVGQDQRSLGALIVPN 545
>gi|332711790|ref|ZP_08431721.1| long-chain acyl-CoA synthetase [Moorea producens 3L]
gi|332349768|gb|EGJ29377.1| long-chain acyl-CoA synthetase [Moorea producens 3L]
Length = 659
Score = 357 bits (917), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 191/473 (40%), Positives = 290/473 (61%), Gaps = 37/473 (7%)
Query: 24 VFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKN 83
+ +Y ++++ G + ++ + +N R + +AT +YTSGTTG PKGVML+H N
Sbjct: 185 IVNYTQLMEAG--ASRSVTKANHNR----------ETLATLLYTSGTTGKPKGVMLSHGN 232
Query: 84 LLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRY 143
LLHQ+ +L ++ + D+ LS+LP WH YER+ YF+ S+G +YT +R++K DL+ +
Sbjct: 233 LLHQVNTLGTVIEIQKSDRVLSILPTWHAYERSAEYFLLSQGSTQIYTNLRHVKKDLKTF 292
Query: 144 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQ 203
+P++M+ VP ++E++Y G+QKQ ++ + + L+ S Y +R+ +G L
Sbjct: 293 KPNFMVGVPRLWESIYEGVQKQFREQPEGKQKLVQNLLGFSQRYIEARRLAQGLTLDNLN 352
Query: 204 KQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHID 262
P I L A + + LWP+H LA KLVY+K++ A G K +SGGGSL H+D
Sbjct: 353 PSP------IQKLLATVQASYLWPVHQLANKLVYQKVREATGGEIKQVISGGGSLARHLD 406
Query: 263 LFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGS 322
F+E IGV+V VGYGLTE+SPV ARR N+ S G P+ T+I+IVD ET++ LP G
Sbjct: 407 NFFEIIGVEVLVGYGLTETSPVTNARRSYRNLRFSAGPPLPETQIRIVDPETHQPLPQGQ 466
Query: 323 KGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEG 382
G+V V+G QVMQ Y+ P AT +A+D D W +TGD+GW+ P + LVL G
Sbjct: 467 TGLVMVKGPQVMQEYYHKPEATAKAIDRDRWFDTGDLGWVTPQND----------LVLTG 516
Query: 383 RAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVP--DKEEVLMAAK 440
RAKDTIVL+ GEN+EP +E+A LRS+ I QI+++GQDQ+ GA+IVP D + AA+
Sbjct: 517 RAKDTIVLTNGENIEPQPIEDACLRSAYIDQIMLVGQDQKALGALIVPNLDALQGWAAAQ 576
Query: 441 RLSI-VHADASELSKEKTISLLYGELRKWTS-----KCSFQIGPIHVVDEPFT 487
L++ V A +L+ ++ +L EL + + +I ++ EPF+
Sbjct: 577 NLTLDVFAQDVDLNTKEVQTLYRTELNREVQNRPGYRQDDRISTFRLILEPFS 629
>gi|376004162|ref|ZP_09781920.1| putative long-chain-fatty-acid-CoA ligase, AMP dependent
[Arthrospira sp. PCC 8005]
gi|375327496|emb|CCE17673.1| putative long-chain-fatty-acid-CoA ligase, AMP dependent
[Arthrospira sp. PCC 8005]
Length = 647
Score = 357 bits (916), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 195/506 (38%), Positives = 294/506 (58%), Gaps = 45/506 (8%)
Query: 1 MRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDD 60
+RF++LL + + + IP+ ++ ++I G + T +D
Sbjct: 143 IRFVVLLSDEDITAEDSL--SIPIVNFSQLITKGED-----------MTLLNPPTTKLED 189
Query: 61 IATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF 120
+AT +YTSGTTG PKGVMLTH+N LHQ+ ++ D++ + G+ LS+LP WH R+ Y+
Sbjct: 190 LATLLYTSGTTGKPKGVMLTHRNFLHQLITIADVIAPQPGEIVLSILPTWHSLGRSGQYY 249
Query: 121 IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARAL 180
SRG ++YT +R K DLQ ++P YM+SVP ++E++Y QKQ A R+ +
Sbjct: 250 FLSRGTMVIYTNIRYFKQDLQEFKPQYMVSVPRIWESIYEAAQKQFRDGPATRQKLVNFF 309
Query: 181 IRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKI 240
+S Y +RI + + + AL A++ +L P+H L +KL+Y+K+
Sbjct: 310 FGMSNRYIEARRIVQKLTIPGQGSNQNSSTAL-----AKLQTILLTPVHALGDKLIYQKV 364
Query: 241 QSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVG 299
+ A+G K +SGGGSL MH++ FYE +G+ + VGYGLTE++PV+ ARRP+ N+ GS G
Sbjct: 365 RQAVGGKLKFAISGGGSLAMHLENFYEIVGIDLLVGYGLTETAPVLTARRPSHNLRGSAG 424
Query: 300 HPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDI 359
PI TEI+I+D ET + G KG+V RG QVM GYF+NP AT +A+D +GW +TGD+
Sbjct: 425 RPIPETEIRIIDPETRQTCEPGYKGLVLARGPQVMTGYFQNPEATDKAIDPEGWFDTGDL 484
Query: 360 GWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQ 419
GW+ P LVL GRAKDTIVL+ GEN+EP +E+A +RS I QIV++GQ
Sbjct: 485 GWLTPQKD----------LVLTGRAKDTIVLTNGENIEPQPIEDACVRSPYIDQIVLVGQ 534
Query: 420 DQRRPGAIIVPDKEEVLMAAKRLSI---VHADASELSKEKTI--------SLLYGELR-K 467
DQ+ GA+IVP+ + + A + V + + E I SL EL +
Sbjct: 535 DQKSLGALIVPNLDALKQWASGQGLHLQVPGEEQQGETENAIAIDSQPIQSLFRQELNLQ 594
Query: 468 WTSKCSF----QIGPIHVVDEPFTVN 489
++ SF +IG ++ EPF+++
Sbjct: 595 VKNRPSFRPDDRIGQFRLILEPFSID 620
>gi|209524077|ref|ZP_03272628.1| AMP-dependent synthetase and ligase [Arthrospira maxima CS-328]
gi|423066015|ref|ZP_17054805.1| AMP-dependent synthetase and ligase [Arthrospira platensis C1]
gi|209495452|gb|EDZ95756.1| AMP-dependent synthetase and ligase [Arthrospira maxima CS-328]
gi|406712514|gb|EKD07699.1| AMP-dependent synthetase and ligase [Arthrospira platensis C1]
Length = 648
Score = 357 bits (915), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 195/506 (38%), Positives = 294/506 (58%), Gaps = 45/506 (8%)
Query: 1 MRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDD 60
+RF++LL + + + IP+ ++ ++I G + T +D
Sbjct: 144 IRFVVLLSDEDITAEDSL--SIPIVNFSQLITKGED-----------MTLLNPPTTKLED 190
Query: 61 IATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF 120
+AT +YTSGTTG PKGVMLTH+N LHQ+ ++ D++ + G+ LS+LP WH R+ Y+
Sbjct: 191 LATLLYTSGTTGKPKGVMLTHRNFLHQLITIADVIAPQPGEIVLSILPTWHSLGRSGQYY 250
Query: 121 IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARAL 180
SRG ++YT +R K DLQ ++P YM+SVP ++E++Y QKQ A R+ +
Sbjct: 251 FLSRGTMVIYTNIRYFKQDLQEFKPQYMVSVPRIWESIYEAAQKQFRDGPATRQKLVNFF 310
Query: 181 IRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKI 240
+S Y +RI + + + AL A++ +L P+H L +KL+Y+K+
Sbjct: 311 FGMSNRYIQARRIVQKLTIPGQGSNQNSSTAL-----AKLQTILLTPVHALGDKLIYQKV 365
Query: 241 QSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVG 299
+ A+G K +SGGGSL MH++ FYE +G+ + VGYGLTE++PV+ ARRP+ N+ GS G
Sbjct: 366 RQAVGGKLKFAISGGGSLAMHLENFYEIVGIDLLVGYGLTETAPVLTARRPSHNLRGSAG 425
Query: 300 HPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDI 359
PI TEI+I+D ET + G KG+V RG QVM GYF+NP AT +A+D +GW +TGD+
Sbjct: 426 RPIPETEIRIIDPETRQTCEPGYKGLVLARGPQVMTGYFQNPEATDKAIDPEGWFDTGDL 485
Query: 360 GWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQ 419
GW+ P LVL GRAKDTIVL+ GEN+EP +E+A +RS I QIV++GQ
Sbjct: 486 GWLTPQKD----------LVLTGRAKDTIVLTNGENIEPQPIEDACVRSPYIDQIVLVGQ 535
Query: 420 DQRRPGAIIVPDKEEVLMAAKRLSI---VHADASELSKEKTI--------SLLYGELR-K 467
DQ+ GA+IVP+ + + A + V + + E I SL EL +
Sbjct: 536 DQKSLGALIVPNLDALKQWASGQGLHLQVPGEEQQGETENAIAIDSQPIQSLFRQELNLQ 595
Query: 468 WTSKCSF----QIGPIHVVDEPFTVN 489
++ SF +IG ++ EPF+++
Sbjct: 596 VKNRPSFRPDDRIGQFRLILEPFSID 621
>gi|427736347|ref|YP_007055891.1| AMP-forming long-chain acyl-CoA synthetase [Rivularia sp. PCC 7116]
gi|427371388|gb|AFY55344.1| AMP-forming long-chain acyl-CoA synthetase [Rivularia sp. PCC 7116]
Length = 663
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 206/505 (40%), Positives = 299/505 (59%), Gaps = 49/505 (9%)
Query: 1 MRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDD 60
++ +ILL + +P E I VF++ +++++G A+ + + D
Sbjct: 162 IQLVILL----TEESPPTEEVIKVFNFGQLMEIG------------AKHNLEPVKRSRDS 205
Query: 61 IATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF 120
+AT +YTSGT+G PKGVML+H NLL+Q+R+L IV E GD LS+LP WHV ER YF
Sbjct: 206 LATLLYTSGTSGKPKGVMLSHGNLLYQVRNLRAIVQPEAGDVVLSILPTWHVLERTGEYF 265
Query: 121 IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARAL 180
+ S+G +YT +R++K+DL++Y+PHYMI+VP + E++Y G+QKQ +++ +
Sbjct: 266 LLSQGCTQVYTNLRSIKNDLKKYKPHYMIAVPRILESVYEGVQKQFREQPTSKQNLINRF 325
Query: 181 IRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKI 240
+ IS Y +RI + L +A A I L PLH LA K+VY K+
Sbjct: 326 LGISGKYIQARRIAQNLDLQNLNPSTGERIA------ASIQEKALSPLHALAGKIVYGKV 379
Query: 241 QSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVG 299
+ A G K + GGG+L HID FYE IG+++ VGYGLTE+SPV ARR N+ GS G
Sbjct: 380 KEATGGRIKQFICGGGALAKHIDDFYEIIGIEILVGYGLTETSPVTHARRHWSNLRGSSG 439
Query: 300 HPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDI 359
+ TE+KIVD ET + L KG+V ++G Q+MQGY+KNP ATK+A+D +GW ++GD+
Sbjct: 440 LGVPGTEVKIVDLETRKELAPTEKGLVLLKGPQIMQGYYKNPEATKKAIDSEGWFDSGDL 499
Query: 360 GWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQ 419
GW+ P +VL GRAKDTIVL+ GEN+EPL +E+A LRSS I QI+++GQ
Sbjct: 500 GWVTPRLD----------IVLTGRAKDTIVLTNGENIEPLPIEDACLRSSFIDQIMLVGQ 549
Query: 420 DQRRPGAIIVPDKE--EVLMAAKRLSI-VHADASELSKEKTISL------------LYGE 464
D++ GA IVP+ E E A+ L + V D S + I+L L E
Sbjct: 550 DKKSLGAFIVPNVEALEKWAEAQNLELCVKEDNVTSSTSQKINLESKMIQDLFRQELTRE 609
Query: 465 LRKWTS-KCSFQIGPIHVVDEPFTV 488
+R + +IGP ++ EPF++
Sbjct: 610 VRNRPGYRPDDRIGPFKLILEPFSM 634
>gi|300868267|ref|ZP_07112896.1| AMP-dependent synthetase and ligase [Oscillatoria sp. PCC 6506]
gi|300333702|emb|CBN58080.1| AMP-dependent synthetase and ligase [Oscillatoria sp. PCC 6506]
Length = 651
Score = 355 bits (912), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 198/496 (39%), Positives = 290/496 (58%), Gaps = 43/496 (8%)
Query: 1 MRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDD 60
++FIILL S P+ E + V + E+I G + + +N R+
Sbjct: 162 IQFIILL----SDEEPEKSETLTVIKFSEVIATG--ANRPLKPTNHKRQ----------T 205
Query: 61 IATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF 120
+AT +YTSGTTG PKGV+LTH NLLHQI + I+ + G+ LS+LP WH YER Y+
Sbjct: 206 LATLLYTSGTTGKPKGVILTHGNLLHQITTFGVILQPQPGESALSILPSWHAYERTVEYY 265
Query: 121 IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARAL 180
+ S+G +YT++R K D + +P YM+SVP +++++Y QKQ A ++ + L
Sbjct: 266 LLSQGCTQIYTSIRYFKQDFKTCKPQYMVSVPRIWDSIYEAAQKQFREQPANKQKLVNFL 325
Query: 181 IRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKI 240
+ S Y +RI + L P+ L A+I +L PLH + EKL+Y+K+
Sbjct: 326 LGTSLKYIQSRRIAQDLTLNLEPPTPA------KKLTAQIKTILLLPLHAIGEKLIYQKV 379
Query: 241 QSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVG 299
+ A G K +SGGGSL MH+D F+E G+ + VGYGLTE+SPV+ RRP N+ GS G
Sbjct: 380 RQATGGQFKCAISGGGSLAMHLDNFFEITGINLLVGYGLTETSPVLTVRRPWHNLRGSAG 439
Query: 300 HPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDI 359
P+ TEIKIVD ET + LP G G+V RG Q+M GY+ NP AT +A+D++GW +TGD+
Sbjct: 440 QPLPETEIKIVDPETRKPLPIGQIGLVLGRGPQIMGGYYLNPQATAKAIDKEGWFDTGDL 499
Query: 360 GWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQ 419
GW+ G L+L GRAKDTIVL+ GEN+EP +E+A+LRS+ I QI+++GQ
Sbjct: 500 GWMT----------SGNDLILTGRAKDTIVLTNGENIEPQPIEDASLRSAYIDQIMLVGQ 549
Query: 420 DQRRPGAIIVPDKEEVLMAAKRLSIVHADASEL--SKEKTISLLYGELRKWTS-----KC 472
DQ+ GA+IVP+ E V K ++ ++ E+ + + L EL + +
Sbjct: 550 DQKFLGALIVPNHEAV---QKWIASLNPSLQEIDWNSKAVQDLFRQELNREVQNRPGYRP 606
Query: 473 SFQIGPIHVVDEPFTV 488
+IG ++ EPF+V
Sbjct: 607 DDRIGSFRLILEPFSV 622
>gi|428207002|ref|YP_007091355.1| AMP-dependent synthetase and ligase [Chroococcidiopsis thermalis
PCC 7203]
gi|428008923|gb|AFY87486.1| AMP-dependent synthetase and ligase [Chroococcidiopsis thermalis
PCC 7203]
Length = 674
Score = 355 bits (910), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 179/376 (47%), Positives = 249/376 (66%), Gaps = 17/376 (4%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 118
D +AT +YTSGTTG PKGVML+H NLLHQ+ S +V E GD+ LS+LP WH YER+
Sbjct: 198 DTLATLMYTSGTTGKPKGVMLSHGNLLHQVTSFGAVVQPEIGDRILSILPVWHCYERSVE 257
Query: 119 YFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 178
YF+ S+G +YT +R++K DL+ ++P M+ VP ++E++Y G+QKQ ++ +
Sbjct: 258 YFLLSQGCTQIYTNIRHVKADLKAFKPRLMVGVPRLWESIYEGVQKQFRDQPVKKQRLIY 317
Query: 179 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 238
+L+ IS Y +RI G L P + L A I A+L P+H LA++L+YK
Sbjct: 318 SLLNISQRYIKARRIVRGLALDNLYPSP------LQRLQAGIQTAVLAPIHNLADRLIYK 371
Query: 239 KIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 297
+++ A G + +SGGGSL MH++ F+E +GV++ VGYGLTE+SPV RRP N+ GS
Sbjct: 372 QVREATGGRIRQVISGGGSLAMHLENFFEIVGVEILVGYGLTETSPVTHVRRPWRNLRGS 431
Query: 298 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 357
G P+ TE KIVD ET + LP +G+V +RG QVMQGY+KNP AT +A+D +GW +TG
Sbjct: 432 SGLPMAGTEAKIVDPETRQTLPPMQRGLVLIRGPQVMQGYYKNPEATAKAIDPEGWFDTG 491
Query: 358 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 417
D+G + P + +VL GRAKDTIVLS GEN+EP +E+A LRS I QI+++
Sbjct: 492 DLGLVTPKND----------IVLTGRAKDTIVLSNGENIEPQPIEDACLRSPYIDQIMLV 541
Query: 418 GQDQRRPGAIIVPDKE 433
GQDQR GA+IVP+ E
Sbjct: 542 GQDQRSLGALIVPNLE 557
>gi|428307720|ref|YP_007144545.1| long-chain-fatty-acid--CoA ligase [Crinalium epipsammum PCC 9333]
gi|428249255|gb|AFZ15035.1| Long-chain-fatty-acid--CoA ligase [Crinalium epipsammum PCC 9333]
Length = 662
Score = 354 bits (909), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 175/374 (46%), Positives = 249/374 (66%), Gaps = 17/374 (4%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 118
D +AT +YTSGTTG PKGVML+H NLLHQ+ +L ++ + G K LS+LP WH YER+
Sbjct: 197 DTLATLIYTSGTTGQPKGVMLSHGNLLHQVTTLGTVIKPQQGSKVLSILPSWHSYERSAE 256
Query: 119 YFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 178
YF+ S+G +YT +R +K DL+ ++P+YMI+VP ++E++Y G QKQ + ++ +
Sbjct: 257 YFLLSQGCTQLYTNLRYIKQDLKTFKPNYMIAVPRLWESIYEGAQKQFREQPSNKQKLIN 316
Query: 179 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 238
IS Y +R+ +G L PS + + A++ ++L P+H L E+LVY
Sbjct: 317 TFFSISQRYIKARRLAQGLDL--ENLNPSA----TEKISAKVQASVLAPVHALGERLVYG 370
Query: 239 KIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 297
K++ A G V SGGGSL H++ F+E IGV + VGYGLTE+SPV ARRP N+ GS
Sbjct: 371 KVREATGGEIIQVISGGGSLAKHLENFFEIIGVNILVGYGLTETSPVTNARRPWHNLRGS 430
Query: 298 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 357
G PI TEIKIV+ ET + LP G +G+V ++G QVMQGY++NP AT +A+D +GW ++G
Sbjct: 431 SGKPIPGTEIKIVNPETRQPLPTGERGLVLIKGPQVMQGYYQNPEATAKAIDSEGWFDSG 490
Query: 358 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 417
D+GW+ + LVL GRAKDTIVL+ GEN+EP +E+A LRS+ + QIV++
Sbjct: 491 DLGWVTKEND----------LVLTGRAKDTIVLTNGENIEPQPIEDACLRSAYVDQIVLV 540
Query: 418 GQDQRRPGAIIVPD 431
GQDQ+ GA+IVP+
Sbjct: 541 GQDQKSLGALIVPN 554
>gi|302835167|ref|XP_002949145.1| hypothetical protein VOLCADRAFT_120723 [Volvox carteri f.
nagariensis]
gi|300265447|gb|EFJ49638.1| hypothetical protein VOLCADRAFT_120723 [Volvox carteri f.
nagariensis]
Length = 643
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 205/463 (44%), Positives = 286/463 (61%), Gaps = 38/463 (8%)
Query: 1 MRFIILLWGKKSSVAPDIVEEI--PVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGS 58
+RF++LLWG+ P V + P+ SY++++ G S KA S + +
Sbjct: 134 LRFVVLLWGEAE---PAHVSSLTCPLLSYNDVLRRGEASLKAGS--------FSPAEVSP 182
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 118
DD+AT VYTSGTTG+PKGVMLTH NL +Q+R+L + + GD+ LS+LPPWH+YER C
Sbjct: 183 DDLATLVYTSGTTGHPKGVMLTHGNLTYQVRNLSYFLAVQPGDRVLSLLPPWHIYERTCS 242
Query: 119 YFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 178
YF+ SRG + +YT +R L+DDL + P + + VPLV +TL++ +++++ R +A
Sbjct: 243 YFVLSRGGQQVYTNIRRLRDDLTAFTPDHFVCVPLVLDTLHARVRQRLAAGPRHRAAIAT 302
Query: 179 ALIRISFAYT----AFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILW-----PLH 229
AL+ AY A + +G T A + WA+I+ A + PLH
Sbjct: 303 ALLAAGAAYHALPPADRGTSDGLVAT---------AAGLARRWAQILGAAVLAALLTPLH 353
Query: 230 LLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARR 289
LA KLVY KI+ A+GI K VSGGGSL H+D FYEA+G+ V G+GLTE+SPV+A RR
Sbjct: 354 WLASKLVYGKIREALGIRKTVVSGGGSLAAHLDDFYEALGLPVLNGWGLTETSPVLACRR 413
Query: 290 ---PTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQ 346
P N+ GSVG P T++++VD ET + LP G +G+V G VM GYF + AT +
Sbjct: 414 SDPPEQNIRGSVGVPTPGTQLRVVDPETLDPLPEGRQGLVLANGPGVMAGYFLDEEATAR 473
Query: 347 ALDE-DGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAA 405
A DGW +TGD+GW+AP G RC G LVL GRAKDTIVLS+G+NVEP +E+A
Sbjct: 474 AFRAGDGWFDTGDLGWVAPTGVTG--SRCAGHLVLTGRAKDTIVLSSGKNVEPQPIEDAV 531
Query: 406 LRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHAD 448
S LI+ +V++GQD+R GA++ PD E+ L A S+ A+
Sbjct: 532 AASGLIKHVVLVGQDKRELGALVWPD-EDALSATPENSLSPAE 573
>gi|428210574|ref|YP_007083718.1| AMP-forming long-chain acyl-CoA synthetase [Oscillatoria acuminata
PCC 6304]
gi|427998955|gb|AFY79798.1| AMP-forming long-chain acyl-CoA synthetase [Oscillatoria acuminata
PCC 6304]
Length = 668
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 195/452 (43%), Positives = 281/452 (62%), Gaps = 38/452 (8%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 118
+ +AT +YTSGTTG PKGVMLTH NLLHQI +L ++ GD+ +++LP WH + R
Sbjct: 204 ETLATLIYTSGTTGKPKGVMLTHGNLLHQIENLPTLMQPTPGDRIITILPTWHSFGRMGQ 263
Query: 119 YFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 178
YF+ SRG YT +R LK DL+ Y P Y VP ++E++Y G+QKQ A R+ + +
Sbjct: 264 YFLLSRGCSQFYTNIRYLKADLKEYHPKYTFGVPRLWESIYEGVQKQFREQPANRQKLVK 323
Query: 179 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 238
S +Y RI +G L Q +P+ + + L A I A+LWPLH L ++LVY
Sbjct: 324 TFFGFSQSYIEAGRILQGLQL---QLEPA---SGSEKLLAGIKRALLWPLHTLGDRLVYN 377
Query: 239 KIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 297
K++ A G + +SGGGSL MHI+ F+E IG+ V VGYGLTE+SPV+ ARR N+ GS
Sbjct: 378 KVRQATGGQLQYVISGGGSLAMHIENFFEIIGIDVLVGYGLTETSPVLTARRFWKNLRGS 437
Query: 298 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 357
G PI +TE++IV ET + L G +G+V RG Q+MQGY++NP AT +A+D +GW +TG
Sbjct: 438 AGRPIPYTELRIVHPETRKPLQTGERGLVLARGPQIMQGYYQNPEATTKAIDPEGWFDTG 497
Query: 358 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 417
D+GW+ P G LVL GRAKDTIVL+ GEN+EP +E+A +RS+ I Q++++
Sbjct: 498 DLGWLTP----------GNDLVLTGRAKDTIVLTNGENIEPQPIEDACIRSAYIDQMMLV 547
Query: 418 GQDQRRPGAIIVPDKEEVLM--AAKRLSIVHAD---------AS-----ELSKEKTISLL 461
GQDQ+ GA+IVP+ E + +++ LS+ + AS +LS + +L
Sbjct: 548 GQDQKCLGALIVPNFEALQQWASSQNLSLRLPENVSQGNPPPASGTREIDLSSPEVDNLF 607
Query: 462 YGEL-RKWTSKCSF----QIGPIHVVDEPFTV 488
EL R+ ++ + +IGP ++ EPFT+
Sbjct: 608 RQELNREVKNRPGYRPDDRIGPFSLLSEPFTM 639
>gi|113475497|ref|YP_721558.1| AMP-dependent synthetase and ligase [Trichodesmium erythraeum
IMS101]
gi|110166545|gb|ABG51085.1| AMP-dependent synthetase and ligase [Trichodesmium erythraeum
IMS101]
Length = 657
Score = 352 bits (904), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 199/474 (41%), Positives = 280/474 (59%), Gaps = 35/474 (7%)
Query: 22 IPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTH 81
+PV + ++I G E ++ N + +AT +YTSGTTG PKGVM+TH
Sbjct: 183 LPVVKFSQVIAKGEERPLQPTNQN------------LETLATLIYTSGTTGKPKGVMVTH 230
Query: 82 KNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQ 141
NLL+QI L +V G+ LS+LP WH + R Y S+G +YT R LK DLQ
Sbjct: 231 GNLLYQINFLGTVVQPSPGEFTLSILPTWHSFGRTAEYLFLSQGCTQIYTNKRYLKKDLQ 290
Query: 142 RYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTR 201
++PHY++SVP ++E +Y G+Q+Q+ A ++ +AR + IS Y R+ + L
Sbjct: 291 EHKPHYLMSVPRIWELIYEGVQRQLREQPANKQKLARFFLDISERYIQACRVTQELVLEL 350
Query: 202 NQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMH 260
N PS L L+ A +LWP+H L K+VY+KI+ A G K VSGGGSL MH
Sbjct: 351 NS--PSELEKLM----ATWQSWLLWPIHALGTKIVYQKIRQATGGRLKFAVSGGGSLGMH 404
Query: 261 IDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA 320
++ F+E IG+ + VGYGLTE+SPV+ R N+ GS G P+ TEIKIV+ ET E L
Sbjct: 405 LENFFEIIGIDLLVGYGLTETSPVLTVRHYWENLRGSSGRPLPGTEIKIVNPETYETLGF 464
Query: 321 GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVL 380
G KG+V RG Q+M GY++NP ATK+A+D +GWLNTGDIGWI P + L+L
Sbjct: 465 GEKGLVLARGPQIMVGYYQNPEATKKAIDSEGWLNTGDIGWINPRND----------LIL 514
Query: 381 EGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAK 440
GRAKDTIVL+ GEN+EP +E A RS I QI+++GQDQ+ GA+IVP+ E V + A
Sbjct: 515 TGRAKDTIVLTNGENIEPQPIENACTRSQYIDQIMLVGQDQKYLGALIVPNFEAVELWAT 574
Query: 441 RLSIVHADASELSKEKTISLLY-GELRKWTS-----KCSFQIGPIHVVDEPFTV 488
+ + + K + + L+ EL + + +IGP ++ +PFT+
Sbjct: 575 QSQLSESQPKIDWKSQALQELFRQELNQEVKNRPGYRPDDRIGPFRLILDPFTI 628
>gi|218437444|ref|YP_002375773.1| AMP-dependent synthetase and ligase [Cyanothece sp. PCC 7424]
gi|218170172|gb|ACK68905.1| AMP-dependent synthetase and ligase [Cyanothece sp. PCC 7424]
Length = 638
Score = 352 bits (903), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 204/508 (40%), Positives = 293/508 (57%), Gaps = 55/508 (10%)
Query: 2 RFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDI 61
+F+ILL + S + + + ++ +++DLG S F+ + + +D+
Sbjct: 137 QFVILLSDEYSPTD----DPLKILNFKQLLDLG--SNHPFNPVSRTK----------EDL 180
Query: 62 ATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFI 121
AT +YTSGTTG PKGVMLTH N L++I S + GD+ LS+LP WH YER Y++
Sbjct: 181 ATLLYTSGTTGKPKGVMLTHGNFLYEINSFGVAFQPDPGDRVLSILPSWHAYERTVEYYV 240
Query: 122 FSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALI 181
S+G +YT +RN K+DL++++PH M+ VP ++E++Y IQKQ A +R + +
Sbjct: 241 LSQGSTQIYTNLRNFKNDLKQFKPHLMVGVPRLWESIYESIQKQFREQPAKKRKIVNFFL 300
Query: 182 RISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQ 241
+S Y KRI F L V+ + L AR+ +L PLH + ++LVY+KI+
Sbjct: 301 NLSENYVIAKRIANNFSLDHLD------VSASERLMARVKATVLAPLHRVGDRLVYQKIR 354
Query: 242 SAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGH 300
+G KA +SGGGSL HID FYE + + V VGYGLTE+SPV R NV GS G
Sbjct: 355 EGVGGKVKAWISGGGSLARHIDTFYEIVNIPVLVGYGLTETSPVTNVRTLDHNVRGSSGP 414
Query: 301 PINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIG 360
P+ TEI+IVD ET + LP KG+V +RG QVMQGY+K P AT +A+D GW ++GD+G
Sbjct: 415 PLPRTEIRIVDPETRQDLPPKEKGLVLIRGPQVMQGYYKKPEATAKAIDPQGWFDSGDLG 474
Query: 361 WIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQD 420
+ P + LVL GRAKDTIVLS GEN+EP +E+A +RS I QI+++GQD
Sbjct: 475 CVTPIND----------LVLTGRAKDTIVLSNGENIEPQPIEDACVRSPYIDQIMLVGQD 524
Query: 421 QRRPGAIIVPD--------KEEVL------MAAKRLSIVHADASELSKEKTISLLYGELR 466
Q+ GA+IVP+ KE+ L + A R I H S L + +LL EL
Sbjct: 525 QKALGALIVPNLDALSAWGKEQQLDLDIPDIHASRDRIKH---SSLYDKPVQTLLRQELN 581
Query: 467 KWTS-----KCSFQIGPIHVVDEPFTVN 489
+ + QI ++ EPF+++
Sbjct: 582 QRVKDRPGYRIDDQIKVFELILEPFSID 609
>gi|22298844|ref|NP_682091.1| long-chain-fatty-acid CoA ligase [Thermosynechococcus elongatus
BP-1]
gi|22295025|dbj|BAC08853.1| long-chain-fatty-acid CoA ligase [Thermosynechococcus elongatus
BP-1]
Length = 658
Score = 348 bits (893), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 200/450 (44%), Positives = 275/450 (61%), Gaps = 33/450 (7%)
Query: 56 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYER 115
I D++AT +YTSGTTG PKGVM+TH LL QI +L+ IV + GD+ LS+LP WH YER
Sbjct: 196 ITPDNLATLMYTSGTTGQPKGVMVTHGGLLSQIVNLWAIVQPQVGDRVLSILPIWHAYER 255
Query: 116 ACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 175
YF+F+ G YT +R+ K+DL+R +PHYMI+VP ++E+ Y G+QKQ+ S A +R
Sbjct: 256 VAEYFLFACGCSQTYTNLRHFKNDLKRCKPHYMIAVPRIWESFYEGVQKQLRDSPATKRR 315
Query: 176 VARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKL 235
+A+ + + Y +R+ G LT + WL AR+ +L PL+ L EK
Sbjct: 316 LAQFFLSVGQQYILQRRLLTGLSLTNPHPR-----GWQKWL-ARVQTLLLKPLYELGEKR 369
Query: 236 VYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNV 294
+Y KI+ A G K +SGGG+L H+D FYE I ++V VGYGLTE++ V+ ARR N+
Sbjct: 370 LYSKIREATGGEIKQVISGGGALAPHLDTFYEVINLEVLVGYGLTETAVVLTARRSWANL 429
Query: 295 LGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWL 354
GS G PI T IKIVD ET L G KG+V +G QVM+GY+ P AT + LD +GW
Sbjct: 430 RGSAGRPIPDTAIKIVDPETKAPLEFGQKGLVMAKGPQVMRGYYNQPEATAKVLDAEGWF 489
Query: 355 NTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQI 414
+TGD+G++ P+ G LVL GR KDTIVLS GEN+EP +E+A +RS I QI
Sbjct: 490 DTGDLGYLTPN----------GDLVLTGRQKDTIVLSNGENIEPQPIEDACVRSPYIDQI 539
Query: 415 VVIGQDQRRPGAIIVPDKE--EVLMAAK--RLSIVHADASELSKE------KTISLLYGE 464
+++GQDQ+ GA+IVP+ E E + AK RL + + A S E K I LY +
Sbjct: 540 MLVGQDQKALGALIVPNLEALEAWVVAKGYRLELPNRPAQAGSGEVVTLESKVIIDLYRQ 599
Query: 465 --LRKWTSKCSF----QIGPIHVVDEPFTV 488
LR+ ++ + +I V EPFT+
Sbjct: 600 ELLREVQNRPGYRPDDRIATFRFVLEPFTI 629
>gi|427421674|ref|ZP_18911857.1| AMP-forming long-chain acyl-CoA synthetase [Leptolyngbya sp. PCC
7375]
gi|425757551|gb|EKU98405.1| AMP-forming long-chain acyl-CoA synthetase [Leptolyngbya sp. PCC
7375]
Length = 641
Score = 345 bits (885), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 195/499 (39%), Positives = 285/499 (57%), Gaps = 46/499 (9%)
Query: 1 MRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSD- 59
++FI+LL S P + + ++ ++++LG + E + D
Sbjct: 149 LQFIVLL----SDETPQLETTTKLLNFTQLMELG--------------VGVELEAVKCDR 190
Query: 60 -DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 118
D+AT +YTSGT+G PKGVML+ NLL QI +V + G K +S+LP WH YER
Sbjct: 191 TDLATLMYTSGTSGRPKGVMLSQDNLLSQISGACSVVHPKPGSKVMSILPIWHCYERTFE 250
Query: 119 YFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 178
YF S+G++ +YT +R +K DL+ Y+P+YM+ VP ++E++Y G+QKQ +++ +
Sbjct: 251 YFTLSQGVQQVYTNIRYVKKDLKAYKPNYMVGVPRLWESIYEGVQKQFREQPESKQKLIN 310
Query: 179 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 238
+ S Y A KRI E L Y + D A I CA+L P H L + +VYK
Sbjct: 311 FFLHQSQRYIAAKRIAENLSL-------DYSPSAFDRAMASIQCAVLLPFHKLGDSMVYK 363
Query: 239 KIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 297
KI+ A G VSGGGS+ H++ FYE I V + GYGLTE+SP+ RRP N+ G+
Sbjct: 364 KIREATGGDINFVVSGGGSIADHLEDFYEIIDVAILGGYGLTETSPITHVRRPWQNLRGA 423
Query: 298 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 357
G P+ TE +IVD ++ + +P G KG+V VRG Q+MQGY+KNP AT +A+D DGW +TG
Sbjct: 424 DGQPLPGTETRIVDLDSRQDVPQGQKGLVLVRGPQIMQGYYKNPDATSKAIDPDGWFDTG 483
Query: 358 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 417
D+G I G LV+ GRAKDTIVL++GEN+EP +E A RS + QI+++
Sbjct: 484 DLGKIT----------ANGDLVITGRAKDTIVLTSGENIEPQPIENACARSKYVDQIMLV 533
Query: 418 GQDQRRPGAIIVPDKEEVLMAAKRLSIVHADAS---ELSKEKTISLLYGELRKWTS---- 470
GQDQ+ GA+IVP+ E + A I D + L+ K +L EL +
Sbjct: 534 GQDQKVLGALIVPNLEALSQWATTQGITIDDDNPVESLNNSKVQTLFKQELTREVKARPG 593
Query: 471 -KCSFQIGPIHVVDEPFTV 488
+ +IGP ++ EPF++
Sbjct: 594 HRPDERIGPFTLLSEPFSM 612
>gi|186686430|ref|YP_001869626.1| AMP-dependent synthetase and ligase [Nostoc punctiforme PCC 73102]
gi|186468882|gb|ACC84683.1| AMP-dependent synthetase and ligase [Nostoc punctiforme PCC 73102]
Length = 649
Score = 344 bits (882), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 197/496 (39%), Positives = 294/496 (59%), Gaps = 40/496 (8%)
Query: 1 MRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDD 60
++F ILL S AP + V ++ ++I++G+ N D
Sbjct: 157 IQFAILL----SDEAPPTDGTLKVLNFAQLIEIGKNHNFVPVKQN------------RDA 200
Query: 61 IATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF 120
+AT +YTSGTTG PKGVML++ NL+HQI + ++ GD LS+LP WH YER Y+
Sbjct: 201 LATLIYTSGTTGRPKGVMLSYSNLMHQITTFGTVLQPNAGDIVLSILPSWHSYERTVEYY 260
Query: 121 IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARAL 180
+ S+G +YT +R++K DL++++P+YM+ VP ++E++Y G+QKQ A ++ + L
Sbjct: 261 LLSQGCTQIYTNLRSVKGDLRQFKPNYMVGVPRLWESIYEGVQKQFREQPAKKQRLINFL 320
Query: 181 IRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKI 240
+ IS Y +R+ +G L + + I+ L A+I A L PLH L E+LVY K+
Sbjct: 321 LGISDKYIKARRVAQGLDLN------NLHASAIERLTAKIQAAALLPLHALGERLVYAKV 374
Query: 241 QSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVG 299
+ A G K +SGGG+LP HID F+E IGV++ GYGLTE+SPV RRP N++G+ G
Sbjct: 375 REATGGHVKQMISGGGALPRHIDNFFEIIGVQILQGYGLTETSPVTHVRRPWRNLIGASG 434
Query: 300 HPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDI 359
P+ TE KIVD ET LP +G+V +RG Q+MQGY++NP AT +A+D +GW ++GD+
Sbjct: 435 LPLPATEAKIVDPETKAPLPIEKRGLVLLRGPQIMQGYYQNPEATAKAIDAEGWFDSGDL 494
Query: 360 GWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQ 419
GW+ P LVL GRAKDTIVL+ GEN+EP +E+A LRS I QI+++GQ
Sbjct: 495 GWLTPQDD----------LVLTGRAKDTIVLTNGENIEPQPIEDACLRSPYIDQIMLVGQ 544
Query: 420 DQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTI--SLLYGELRKWTS-----KC 472
DQR GA+IVP+ E + A+ + + ++ E + L EL + +
Sbjct: 545 DQRSLGALIVPNVEALEKWAQNDPATSSPSQKIDLESRMIQDLFRQELNREVQNRPGYRP 604
Query: 473 SFQIGPIHVVDEPFTV 488
+IG ++ EPF++
Sbjct: 605 DDRIGTFKLILEPFSI 620
>gi|428222525|ref|YP_007106695.1| AMP-forming long-chain acyl-CoA synthetase [Synechococcus sp. PCC
7502]
gi|427995865|gb|AFY74560.1| AMP-forming long-chain acyl-CoA synthetase [Synechococcus sp. PCC
7502]
Length = 624
Score = 343 bits (881), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 174/408 (42%), Positives = 260/408 (63%), Gaps = 29/408 (7%)
Query: 25 FSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNL 84
+++ E+I+LG + K + KH +AT +YTSGT GNPKGVML+H NL
Sbjct: 154 YNFSEVIELG--ASKDLGNPEITPKH----------LATLIYTSGTGGNPKGVMLSHGNL 201
Query: 85 LHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQ 144
L+QI D+ E K +S+LP WH YER+ Y+IFS+G +YT +R++K DL+ +Q
Sbjct: 202 LYQINGALDVFVVEPSKKVMSILPTWHSYERSFEYYIFSQGCTQIYTNLRSIKKDLKDFQ 261
Query: 145 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQK 204
+YM++VP ++E++Y G+QKQ A+++ + ++S AY +RI++G L
Sbjct: 262 ANYMVAVPRLWESIYEGVQKQFREQPASKQKLINFFFKVSLAYIKARRIWQGLDLE---- 317
Query: 205 QPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAI-GISKAGVSGGGSLPMHIDL 263
+ L + L A + L P+HLL ++LVYKK++ A G + VSGGGS+ +H++
Sbjct: 318 --NLAPTLGEKLIAGLTMLALTPVHLLGDRLVYKKVREATGGCLELVVSGGGSIALHLED 375
Query: 264 FYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSK 323
FYE + + + GYGLTE+SP+ RRP N+ G P+ TE KI+D T + +PA +
Sbjct: 376 FYEIVNIPILSGYGLTETSPITHTRRPHRNIRNGDGQPLPKTETKIIDQITRQSVPAYCQ 435
Query: 324 GIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGR 383
GIV +RG Q+MQGY+KNP+AT +A+D +GW ++GD+G++ P LV+ GR
Sbjct: 436 GIVTLRGPQIMQGYYKNPTATAKAIDPEGWFDSGDLGYVTPWDD----------LVITGR 485
Query: 384 AKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPD 431
AKDTIVLS GEN+EP +E+A LRS I QI+V+GQDQ++ GA+IVP+
Sbjct: 486 AKDTIVLSNGENIEPQAIEDACLRSPFIDQIIVVGQDQKQLGALIVPN 533
>gi|307154624|ref|YP_003890008.1| AMP-dependent synthetase and ligase [Cyanothece sp. PCC 7822]
gi|306984852|gb|ADN16733.1| AMP-dependent synthetase and ligase [Cyanothece sp. PCC 7822]
Length = 637
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 198/505 (39%), Positives = 296/505 (58%), Gaps = 49/505 (9%)
Query: 1 MRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDD 60
++F+ILL +++ + + + ++ ++++LG S F R
Sbjct: 136 VQFVILLSDEQAPTN----DPLKILNFKQLLELGANS--PFKPVEQTRA----------S 179
Query: 61 IATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF 120
+AT +YTSGTTG PKGVML+H NLLHQI + + E GD+ LS+LP WH YER Y+
Sbjct: 180 LATLIYTSGTTGKPKGVMLSHGNLLHQIINFGTVFQPEPGDRVLSILPSWHSYERTVEYY 239
Query: 121 IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARAL 180
+ S+G+ +YT +R+ K+DL+R+QPH M+ VP ++E++Y GIQKQ +A ++ +
Sbjct: 240 VLSQGVTQIYTNLRSFKNDLKRFQPHLMVGVPRLWESVYEGIQKQFREQNANKQKLVNFF 299
Query: 181 IRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKI 240
++ S Y +RI L S + L A++ A+L PLH L ++L+Y+K+
Sbjct: 300 LKQSENYILAQRIANNLSLNHLNASAS------ERLQAKLKAALLAPLHALGDRLIYEKV 353
Query: 241 QSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVG 299
+ +G + KA +SGGGSL HID FYE + + V VGYGLTE+SPV R N+ GS G
Sbjct: 354 REGVGKNVKAWISGGGSLARHIDTFYEIVNIPVLVGYGLTETSPVTNVRTLERNLRGSCG 413
Query: 300 HPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDI 359
P+ +TEI+IVD ET + LP +G+V +RG QVMQGY+K P AT + +D GW ++GD+
Sbjct: 414 TPLRYTEIRIVDPETRQELPVEQQGLVLIRGPQVMQGYYKKPEATAKVIDPQGWFDSGDL 473
Query: 360 GWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQ 419
GW+ P + LV+ GRAKDTIVLS GEN+EP +E+A +RS I QI+++GQ
Sbjct: 474 GWVTPMND----------LVISGRAKDTIVLSNGENIEPQPIEDACVRSPYIDQIMLVGQ 523
Query: 420 DQRRPGAIIVPDKEEVLMAAKR-----------LSIVHADASELSKEKTISLLYGELRKW 468
DQ+ GA+IVP+ + + AK+ SI AS LS + +LL EL +
Sbjct: 524 DQKALGALIVPNLDALQTWAKQQQLDLEIPGPEASIEEIHASSLSSKPVQNLLRQELNRL 583
Query: 469 TS-----KCSFQIGPIHVVDEPFTV 488
+ QI ++ EPF++
Sbjct: 584 VKDRPGYRADDQIKEFELILEPFSI 608
>gi|428299082|ref|YP_007137388.1| long-chain-fatty-acid--CoA ligase [Calothrix sp. PCC 6303]
gi|428235626|gb|AFZ01416.1| Long-chain-fatty-acid--CoA ligase [Calothrix sp. PCC 6303]
Length = 657
Score = 342 bits (878), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 185/436 (42%), Positives = 265/436 (60%), Gaps = 25/436 (5%)
Query: 61 IATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF 120
+AT +YTSGTTG PKGVMLTH N LHQI +L I+ GDK LS+LP WH + R Y+
Sbjct: 209 LATLIYTSGTTGKPKGVMLTHGNFLHQISTLTAIIQPSVGDKTLSILPTWHSFGRVGEYY 268
Query: 121 IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARAL 180
+G+ +Y+ R LK DLQ Y P Y+I VP ++E++Y GIQK + + + ++
Sbjct: 269 TLGQGVTQIYSNRRYLKQDLQDYTPQYVIGVPRLWESIYEGIQKSFRDKTPRMQKLIKSF 328
Query: 181 IRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKI 240
+ +S Y R ++ L S ++ A I +L PLH L E +VYKKI
Sbjct: 329 LAVSKKYIKAVRTWKKIDLQNLNPTTSQIIN------AWITTILLAPLHFLGEMIVYKKI 382
Query: 241 QSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVG 299
Q A G K + GGGSL H++ F+E +G+++ VGYGLTE+SPV++ARR N+ G+ G
Sbjct: 383 QLATGGKVKQLICGGGSLAQHLEDFFEIVGIQILVGYGLTETSPVLSARRYYKNLRGASG 442
Query: 300 HPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDI 359
P+ TE+KIVD ET++ LP G +G+V +G Q+MQGY+ NP AT +A+D +GW +TGDI
Sbjct: 443 LPLASTELKIVDLETHQPLPQGKRGLVMAKGPQIMQGYYLNPEATSKAIDSEGWFDTGDI 502
Query: 360 GWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQ 419
GW+ P + +VL GRAKDTIVL+ GEN+EP +E+A LRS I QI+++GQ
Sbjct: 503 GWLTPDNQ----------IVLTGRAKDTIVLTNGENIEPQPIEDACLRSDYIDQIMLVGQ 552
Query: 420 DQRRPGAIIVPDKE--EVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTS-----KC 472
DQ+ GA+IVPD E E + +K IV+ + L+ + L+ EL + +
Sbjct: 553 DQKSLGALIVPDLEILESWLLSKNQPIVNGEIG-LNNQMIRDLIREELNREVRDRKGYRR 611
Query: 473 SFQIGPIHVVDEPFTV 488
+I ++ EPFT+
Sbjct: 612 DDEIIVFEIIPEPFTI 627
>gi|407957499|dbj|BAM50739.1| long-chain-fatty-acid CoA ligase [Synechocystis sp. PCC 6803]
Length = 609
Score = 341 bits (874), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 196/465 (42%), Positives = 275/465 (59%), Gaps = 35/465 (7%)
Query: 1 MRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDD 60
++ IILL ++ VA D IP +++ +++ LG A K +D
Sbjct: 109 LKLIILLTDEE--VAED--SAIPQYNFAQVMALG------------AGKIPTPVPRQEED 152
Query: 61 IATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF 120
+AT +YTSGTTG PKGVML+H NLLHQ+R L ++ GD+ LS+LP WH ER+ YF
Sbjct: 153 LATLIYTSGTTGQPKGVMLSHGNLLHQVRELDSVIIPRPGDQVLSILPCWHSLERSAEYF 212
Query: 121 IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARAL 180
+ SRG + YT++R+ K D++ +PH+++ VP ++E+LY G+QK S ++ +
Sbjct: 213 LLSRGCTMNYTSIRHFKGDVKDIKPHHIVGVPRLWESLYEGVQKTFREKSPGQQKLINFF 272
Query: 181 IRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKI 240
IS Y KRI L N S + L+ AR +L PLH L +K+VY K+
Sbjct: 273 FGISQKYILAKRIANNLSL--NHLHASAIARLV----ARCQALVLSPLHYLGDKIVYHKV 326
Query: 241 -QSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVG 299
Q+A G + +SGGG+L H+D FYE + V VGYGLTE++PV AR N+ S G
Sbjct: 327 RQAAGGRLETLISGGGALARHLDDFYEITSIPVLVGYGLTETAPVTNARVHKHNLRYSSG 386
Query: 300 HPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDI 359
PI TEI+IVD ET E LP ++G+V +RG QVMQGY+ P AT + LD++GW ++GD+
Sbjct: 387 RPIPFTEIRIVDMETKEDLPPETQGLVLIRGPQVMQGYYNKPEATAKVLDQEGWFDSGDL 446
Query: 360 GWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQ 419
GW+ P + L+L GRAKDTIVLS GENVEP +E+A LRS+ I QI+++GQ
Sbjct: 447 GWVTPQND----------LILTGRAKDTIVLSNGENVEPQPIEDACLRSAYIDQIMLVGQ 496
Query: 420 DQRRPGAIIVP--DKEEVLMAAKRLSIVHADASELSKEKTISLLY 462
DQ+ GA+IVP D + K L I + S S+ S LY
Sbjct: 497 DQKSLGALIVPNFDALQKWAETKNLQITVPEPSASSEGMQASGLY 541
>gi|16329616|ref|NP_440344.1| long-chain-fatty-acid CoA ligase [Synechocystis sp. PCC 6803]
gi|1652099|dbj|BAA17024.1| long-chain-fatty-acid CoA ligase [Synechocystis sp. PCC 6803]
Length = 696
Score = 340 bits (873), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 183/407 (44%), Positives = 252/407 (61%), Gaps = 19/407 (4%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 118
+D+AT +YTSGTTG PKGVML+H NLLHQ+R L ++ GD+ LS+LP WH ER+
Sbjct: 238 EDLATLIYTSGTTGQPKGVMLSHGNLLHQVRELDSVIIPRPGDQVLSILPCWHSLERSAE 297
Query: 119 YFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 178
YF+ SRG + YT++R+ K D++ +PH+++ VP ++E+LY G+QK S ++ +
Sbjct: 298 YFLLSRGCTMNYTSIRHFKGDVKDIKPHHIVGVPRLWESLYEGVQKTFREKSPGQQKLIN 357
Query: 179 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 238
IS Y KRI L N S + L+ AR +L PLH L +K+VY
Sbjct: 358 FFFGISQKYILAKRIANNLSL--NHLHASAIARLV----ARCQALVLSPLHYLGDKIVYH 411
Query: 239 KI-QSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 297
K+ Q+A G + +SGGG+L H+D FYE + V VGYGLTE++PV AR N+ S
Sbjct: 412 KVRQAAGGRLETLISGGGALARHLDDFYEITSIPVLVGYGLTETAPVTNARVHKHNLRYS 471
Query: 298 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 357
G PI TEI+IVD ET E LP ++G+V +RG QVMQGY+ P AT + LD++GW ++G
Sbjct: 472 SGRPIPFTEIRIVDMETKEDLPPETQGLVLIRGPQVMQGYYNKPEATAKVLDQEGWFDSG 531
Query: 358 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 417
D+GW+ P + L+L GRAKDTIVLS GENVEP +E+A LRS+ I QI+++
Sbjct: 532 DLGWVTPQND----------LILTGRAKDTIVLSNGENVEPQPIEDACLRSAYIDQIMLV 581
Query: 418 GQDQRRPGAIIVP--DKEEVLMAAKRLSIVHADASELSKEKTISLLY 462
GQDQ+ GA+IVP D + K L I + S S+ S LY
Sbjct: 582 GQDQKSLGALIVPNFDALQKWAETKNLQITVPEPSASSEGMQASGLY 628
>gi|383321357|ref|YP_005382210.1| long-chain-fatty-acid CoA ligase [Synechocystis sp. PCC 6803
substr. GT-I]
gi|383324527|ref|YP_005385380.1| long-chain-fatty-acid CoA ligase [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|383490411|ref|YP_005408087.1| long-chain-fatty-acid CoA ligase [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|384435677|ref|YP_005650401.1| long-chain-fatty-acid CoA ligase [Synechocystis sp. PCC 6803]
gi|339272709|dbj|BAK49196.1| long-chain-fatty-acid CoA ligase [Synechocystis sp. PCC 6803]
gi|359270676|dbj|BAL28195.1| long-chain-fatty-acid CoA ligase [Synechocystis sp. PCC 6803
substr. GT-I]
gi|359273847|dbj|BAL31365.1| long-chain-fatty-acid CoA ligase [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|359277017|dbj|BAL34534.1| long-chain-fatty-acid CoA ligase [Synechocystis sp. PCC 6803
substr. PCC-P]
Length = 636
Score = 340 bits (873), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 196/465 (42%), Positives = 275/465 (59%), Gaps = 35/465 (7%)
Query: 1 MRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDD 60
++ IILL ++ VA D IP +++ +++ LG A K +D
Sbjct: 136 LKLIILLTDEE--VAED--SAIPQYNFAQVMALG------------AGKIPTPVPRQEED 179
Query: 61 IATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF 120
+AT +YTSGTTG PKGVML+H NLLHQ+R L ++ GD+ LS+LP WH ER+ YF
Sbjct: 180 LATLIYTSGTTGQPKGVMLSHGNLLHQVRELDSVIIPRPGDQVLSILPCWHSLERSAEYF 239
Query: 121 IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARAL 180
+ SRG + YT++R+ K D++ +PH+++ VP ++E+LY G+QK S ++ +
Sbjct: 240 LLSRGCTMNYTSIRHFKGDVKDIKPHHIVGVPRLWESLYEGVQKTFREKSPGQQKLINFF 299
Query: 181 IRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKI 240
IS Y KRI L N S + L+ AR +L PLH L +K+VY K+
Sbjct: 300 FGISQKYILAKRIANNLSL--NHLHASAIARLV----ARCQALVLSPLHYLGDKIVYHKV 353
Query: 241 -QSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVG 299
Q+A G + +SGGG+L H+D FYE + V VGYGLTE++PV AR N+ S G
Sbjct: 354 RQAAGGRLETLISGGGALARHLDDFYEITSIPVLVGYGLTETAPVTNARVHKHNLRYSSG 413
Query: 300 HPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDI 359
PI TEI+IVD ET E LP ++G+V +RG QVMQGY+ P AT + LD++GW ++GD+
Sbjct: 414 RPIPFTEIRIVDMETKEDLPPETQGLVLIRGPQVMQGYYNKPEATAKVLDQEGWFDSGDL 473
Query: 360 GWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQ 419
GW+ P + L+L GRAKDTIVLS GENVEP +E+A LRS+ I QI+++GQ
Sbjct: 474 GWVTPQND----------LILTGRAKDTIVLSNGENVEPQPIEDACLRSAYIDQIMLVGQ 523
Query: 420 DQRRPGAIIVP--DKEEVLMAAKRLSIVHADASELSKEKTISLLY 462
DQ+ GA+IVP D + K L I + S S+ S LY
Sbjct: 524 DQKSLGALIVPNFDALQKWAETKNLQITVPEPSASSEGMQASGLY 568
>gi|449019989|dbj|BAM83391.1| long-chain-fatty-acid CoA ligase [Cyanidioschyzon merolae strain
10D]
Length = 824
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 177/454 (38%), Positives = 285/454 (62%), Gaps = 37/454 (8%)
Query: 1 MRFIILLWGKKSSVAPDI---VEEIPVFSYDEIIDLGRE------SRKAFSDSNDARKHY 51
+RFI++LW +K ++A I V +P+++Y+E+ + GR +R + S ++ +
Sbjct: 270 VRFIMVLWNRKGAIAEPIRSAVGSVPIYTYEEVTETGRAKVRDALNRTSRSPADAEMERA 329
Query: 52 KYETIGSDD-IATYVYTSGTTGNPKGVMLTHKNLLHQI------RSLYDIVPAEN---GD 101
+ I + +AT VYTSGTTG PKG MLTH+NLLHQI R+ ++P+++ GD
Sbjct: 330 LWRPIAEREMLATLVYTSGTTGQPKGAMLTHRNLLHQIMANSFSRAWRPLLPSQDASAGD 389
Query: 102 KFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSG 161
+++LP WH++ER + SRG+ ++Y+ + + K+DL R++PH ++ VP +YE++Y G
Sbjct: 390 VMVNILPCWHIFERIGELYALSRGVSMVYSKLLHFKEDLARHRPHLLVGVPRLYESIYQG 449
Query: 162 IQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARII 221
I+ Q+ RR + L+ IS + ++RI +G R+ V+ ++ ++A +
Sbjct: 450 IKSQLMKQGRFRRALIFGLLGISTRFVQWRRIRDGALFDRH-------VSTLERIYAGLW 502
Query: 222 CAILWPLHLLAEKLVYKKIQSAI--GISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLT 279
+LWPLH+LA + +++++ G + VSGGGSL M +D F+EAIGV + VGYGLT
Sbjct: 503 TLLLWPLHMLANLIAWRQLRRMALGGRVRTLVSGGGSLAMFLDDFFEAIGVLLIVGYGLT 562
Query: 280 ESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFK 339
E+SPV+A R N+ G+ G + T++KIVD ET + LP G GI+ RG Q+ QGY+K
Sbjct: 563 ETSPVLANRLREHNIRGTTGLVVPGTQVKIVDPETRQTLPPGQTGIICARGEQIFQGYYK 622
Query: 340 NPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPL 399
+P+AT + +D +G+ +TGD+G+ + + G LV+ GR KD IVL+ GEN+EP
Sbjct: 623 DPAATARVIDSEGYFDTGDLGFFSQYT---------GDLVIAGRLKDVIVLNNGENIEPT 673
Query: 400 ELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 433
+E+A L S I Q++++GQDQR GA+IVP+ E
Sbjct: 674 PIEDAMLGSDYIDQVMLVGQDQRALGALIVPNLE 707
>gi|451813776|ref|YP_007450228.1| long-chain-fatty-acid CoA ligase [Synechocystis sp. PCC 6803]
gi|451779745|gb|AGF50714.1| long-chain-fatty-acid CoA ligase [Synechocystis sp. PCC 6803]
Length = 696
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 174/374 (46%), Positives = 241/374 (64%), Gaps = 17/374 (4%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 118
+D+AT +YTSGTTG PKGVML+H NLLHQ+R L ++ GD+ LS+LP WH ER+
Sbjct: 238 EDLATLIYTSGTTGQPKGVMLSHGNLLHQVRELDSVIIPRPGDQVLSILPCWHSLERSAE 297
Query: 119 YFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 178
YF+ SRG + YT++R+ K D++ +PH+++ VP ++E+LY G+QK S ++ +
Sbjct: 298 YFLLSRGCTMNYTSIRHFKGDVKDIKPHHIVGVPRLWESLYEGVQKTFREKSPGQQKLIN 357
Query: 179 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 238
IS Y KRI L N S + L+ AR +L PLH L +K+VY
Sbjct: 358 FFFGISQKYILAKRIANNLSL--NHLHASAIARLV----ARCQALVLSPLHYLGDKIVYH 411
Query: 239 KI-QSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 297
K+ Q+A G + +SGGG+L H+D FYE + V VGYGLTE++PV AR N+ S
Sbjct: 412 KVRQAAGGRLETLISGGGALARHLDDFYEITSIPVLVGYGLTETAPVTNARVHKHNLRYS 471
Query: 298 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 357
G PI TEI+IVD ET E LP ++G+V +RG QVMQGY+ P AT + LD++GW ++G
Sbjct: 472 SGRPIPFTEIRIVDMETKEDLPPETQGLVLIRGPQVMQGYYNKPEATAKVLDQEGWFDSG 531
Query: 358 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 417
D+GW+ P + L+L GRAKDTIVLS GENVEP +E+A LRS+ I QI+++
Sbjct: 532 DLGWVTPQND----------LILTGRAKDTIVLSNGENVEPQPIEDACLRSAYIDQIMLV 581
Query: 418 GQDQRRPGAIIVPD 431
GQDQ+ GA+IVP+
Sbjct: 582 GQDQKSLGALIVPN 595
>gi|443475739|ref|ZP_21065678.1| Long-chain-fatty-acid--CoA ligase [Pseudanabaena biceps PCC 7429]
gi|443019402|gb|ELS33497.1| Long-chain-fatty-acid--CoA ligase [Pseudanabaena biceps PCC 7429]
Length = 625
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 181/446 (40%), Positives = 270/446 (60%), Gaps = 32/446 (7%)
Query: 56 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYER 115
I D +AT +YTSGTT PKGVMLTH N L +I ++ + +K LS+LP WH YER
Sbjct: 171 IQRDTLATLIYTSGTTARPKGVMLTHGNFLFEIEGAQAVLKLKVSEKVLSILPTWHSYER 230
Query: 116 ACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 175
YFIFS+G +YT +R +K DL+ ++P YM++VP ++E++Y G+QKQ +++
Sbjct: 231 TFEYFIFSQGCTQIYTNLRTIKKDLREHKPDYMVAVPRLWESIYEGVQKQFREQPNSKQR 290
Query: 176 VARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKL 235
+ ++ S Y KR+ +G + PS L D L A +I LW +H L KL
Sbjct: 291 LVDFFLKASQKYITAKRVIQGLNVA--NLSPS----LGDKLKASVIVLSLWAVHKLGHKL 344
Query: 236 VYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNV 294
VY+K++ A G + K VSGGGS+ H++ FYE +G+++ GYGLTE+SP+ RRP N+
Sbjct: 345 VYQKVREATGGNFKYIVSGGGSIAEHLEDFYEIVGIEILGGYGLTETSPITHVRRPNRNI 404
Query: 295 LGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWL 354
G G P+ TE +IVD + LP G +G+V +RG QVMQGY+KNP AT +A+D GW
Sbjct: 405 RGGDGQPLIKTETRIVDISSRADLPVGQQGLVLIRGPQVMQGYYKNPEATAKAIDPQGWF 464
Query: 355 NTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQI 414
+TGD+G+++P + L++ GRAKDTIVLS GEN+EP +E+A +RS+ I Q+
Sbjct: 465 DTGDLGYVSPWND----------LIITGRAKDTIVLSNGENIEPQPIEDACIRSNYIDQV 514
Query: 415 VVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADAS------ELSKEKTISLLYGELRKW 468
V++GQDQ++ G +IVP+ L A + ++ D++ L+ K SL E+ +
Sbjct: 515 VLVGQDQKQLGLLIVPN----LSALEAAGLIAPDSNLADILPALNDPKIRSLYREEINRE 570
Query: 469 TSK-----CSFQIGPIHVVDEPFTVN 489
+ +IG + EPFT++
Sbjct: 571 VQNRPGYSVNDRIGVFEFLPEPFTID 596
>gi|443312969|ref|ZP_21042583.1| AMP-forming long-chain acyl-CoA synthetase [Synechocystis sp. PCC
7509]
gi|442777119|gb|ELR87398.1| AMP-forming long-chain acyl-CoA synthetase [Synechocystis sp. PCC
7509]
Length = 629
Score = 334 bits (857), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 180/436 (41%), Positives = 269/436 (61%), Gaps = 23/436 (5%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 118
+D+AT +YTSGT+G PKGVML+ NLL Q+ +V + G+ +S+LP WH YER+
Sbjct: 182 EDLATLMYTSGTSGQPKGVMLSQGNLLSQVFGASAVVEPQPGEVVMSILPIWHCYERSFE 241
Query: 119 YFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 178
YFI + G +YT +R +K D + ++P YM+ VP ++E++Y G+QKQ SA ++ +
Sbjct: 242 YFILAHGCTQIYTNIRYVKKDFKEFKPFYMVGVPRLWESIYEGVQKQFREQSANKQKLIN 301
Query: 179 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 238
S Y +R+ +G L N PS L L WARI L +H LA+K++YK
Sbjct: 302 FFFAQSQRYIMARRVVQGLDL--NNLYPSSLAKL----WARIQIIPLGLIHQLADKIIYK 355
Query: 239 KIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 297
+++ A G K VSGGGS+ H++ FYE +GV + GYGLTE+SP+ RR N+ G+
Sbjct: 356 QVREATGGKVKFLVSGGGSIAEHLEDFYEIVGVDILGGYGLTETSPITHVRRTWRNLRGA 415
Query: 298 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 357
G P+ TE +IV+ E+++ LP G KG+V +RGSQVMQGY+KNP AT +A++ +GW NTG
Sbjct: 416 DGQPLPDTETQIVELESHKPLPVGKKGLVMIRGSQVMQGYYKNPEATAKAINSEGWFNTG 475
Query: 358 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 417
D+GW++ + LV+ GRAKDTIVLS GEN+EP +E A LRS I QI+++
Sbjct: 476 DLGWVSKQND----------LVITGRAKDTIVLSNGENIEPQPIENACLRSPYIDQIMLV 525
Query: 418 GQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGEL-RKWTSKCSF-- 474
GQD+R GA+IVP+++ + A + D S L + + L E+ R+ ++ +
Sbjct: 526 GQDERSLGALIVPNQDALQQWATTQNPA-IDPSNLGNKAILDLYRLEVSREVQNRPGYRP 584
Query: 475 --QIGPIHVVDEPFTV 488
+I ++ EPF++
Sbjct: 585 DERISTFKLIAEPFSI 600
>gi|317969072|ref|ZP_07970462.1| long-chain acyl-CoA synthetase [Synechococcus sp. CB0205]
Length = 638
Score = 330 bits (847), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 182/454 (40%), Positives = 267/454 (58%), Gaps = 35/454 (7%)
Query: 1 MRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDD 60
+RF++LL G + SV P +P F++DE++ G S + G +
Sbjct: 154 LRFVVLLQGDRGSVVP----VVPCFTWDELMAKGASS-----------PTPAWPEGGEER 198
Query: 61 IATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF 120
+AT +YTSGTTG PKGV L+H NLL Q+RSL V GD+ LS+LP WH YER+ YF
Sbjct: 199 LATVLYTSGTTGRPKGVPLSHANLLQQLRSLGVAVAPRPGDRVLSVLPIWHAYERSAEYF 258
Query: 121 IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARAL 180
+ S G + YT +++L+ DLQR +PHY+ISVP ++E L SG + + A+R + R+
Sbjct: 259 LLSCGCQQTYTTLKHLRPDLQRVRPHYLISVPRLWEALLSGFEDALSAMPASRAKLLRSA 318
Query: 181 IRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKI 240
+++S + +R+ L +K+ A + WPLH +AE+L + K+
Sbjct: 319 LKVSRFHCLSRRVAADRTLIPERKRRRLAAA--------AGALLSWPLHGVAEQLFWPKV 370
Query: 241 QSAI--GISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSV 298
++ + G + +SGGG+L +H+D F+EAIG+++ VGYGLTE+SPV+ RR N GS
Sbjct: 371 RAQLIGGRLRTAISGGGALAIHVDGFFEAIGIELLVGYGLTETSPVLTCRRRWNNRRGSS 430
Query: 299 GHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGD 358
G P+ T IKI D E+ VL G +G V +G+QVM GY P AT + LD +GW +TGD
Sbjct: 431 GQPLAGTSIKITDPESGAVLAIGERGKVLAKGAQVMGGYLGKPEATAKVLDAEGWFDTGD 490
Query: 359 IGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIG 418
+G + G LVL GRAKDTIVLS+GEN+EP LEE + SL+ Q++++G
Sbjct: 491 LGHLL----------ADGTLVLTGRAKDTIVLSSGENIEPGPLEECLVACSLVEQVMLVG 540
Query: 419 QDQRRPGAIIVPDKEEVLMAAKRLSIVHADASEL 452
QD++ GA++VP E + A + AD + L
Sbjct: 541 QDRKALGALVVPKLENLEAFAAEQGMSAADPALL 574
>gi|427702586|ref|YP_007045808.1| AMP-forming long-chain acyl-CoA synthetase [Cyanobium gracile PCC
6307]
gi|427345754|gb|AFY28467.1| AMP-forming long-chain acyl-CoA synthetase [Cyanobium gracile PCC
6307]
Length = 653
Score = 325 bits (833), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 192/500 (38%), Positives = 284/500 (56%), Gaps = 46/500 (9%)
Query: 1 MRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDD 60
+RFI+LL G+ AP + +P ++D+++ G S + +
Sbjct: 155 LRFIVLLEGE----APAVPLPLPCLTWDDLLQRGAASPLPPLPTGGPGR----------- 199
Query: 61 IATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF 120
+AT +YTSGTTG PKGV L+H NLLHQ+R+L V GD LS+LP WH YER YF
Sbjct: 200 LATLLYTSGTTGQPKGVPLSHANLLHQLRTLGVAVSPSPGDHVLSVLPIWHAYERTAEYF 259
Query: 121 IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARAL 180
+ S G YT ++ L+ DLQ+ +P Y+ISVP ++E L SG + + +R+ + R
Sbjct: 260 LLSCGCRQTYTTLKQLRSDLQKVRPQYLISVPRLWEALLSGFEDALAAMPPSRQRLLRRA 319
Query: 181 IRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKI 240
+ +S A+ +R L +P V D L A +LWPLH A L++ K+
Sbjct: 320 LAVSRAFHRRRRTALDLTL-----KP---VGAADRLVAAAGALLLWPLHGAAGALLWPKV 371
Query: 241 QSAI--GISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSV 298
++ + G + +SGGG+L +H+D F+EA+G+++ VGYGLTE+SPV+A RRP N GS
Sbjct: 372 RAQLVGGRLRTAISGGGALAIHVDGFFEAVGIELLVGYGLTETSPVLACRRPWSNRRGSA 431
Query: 299 GHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGD 358
G P+ T +K+VD T LP G +G+V RG QVM GY P AT + LD +GW +TGD
Sbjct: 432 GQPLPDTALKVVDPATRTPLPVGERGLVLARGPQVMGGYHNKPEATAKVLDGEGWFDTGD 491
Query: 359 IGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIG 418
+G + G LVL GRAKDTIVLS+GEN+EP LEEA + S L+ Q++++G
Sbjct: 492 LGLLL----------ADGTLVLTGRAKDTIVLSSGENIEPGPLEEALVASPLVEQVMLVG 541
Query: 419 QDQRRPGAIIVPDKEEVLMA-AKRLSIVHADASELSKEKTISLLYGELRKWT-------- 469
QD+++ GA++VP K EVL A A + D + +LL R+
Sbjct: 542 QDRKQLGALVVP-KAEVLQAFAATAQLPCPDPGDPGAGADPALLRALCRECNRLLAARPG 600
Query: 470 SKCSFQIGPIHVVDEPFTVN 489
++ ++G + +V EPF+++
Sbjct: 601 TRADERLGGVALV-EPFSID 619
>gi|318042187|ref|ZP_07974143.1| long-chain acyl-CoA synthetase [Synechococcus sp. CB0101]
Length = 644
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 174/438 (39%), Positives = 260/438 (59%), Gaps = 37/438 (8%)
Query: 1 MRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDD 60
+RF++LL G + SV P +P F+++E++ G ++ + G
Sbjct: 154 LRFVVLLQGDRGSVVP----VLPCFTWEELMAQGAKA-----------PAPAWPEGGEQR 198
Query: 61 IATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF 120
+AT +YTSGTTG PKGV L+H NLLHQ+R L V + GD+ LS+LP WH YER+ YF
Sbjct: 199 LATVLYTSGTTGQPKGVPLSHANLLHQLRHLGVAVAPQPGDRVLSVLPIWHAYERSAEYF 258
Query: 121 IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARAL 180
+ + G YT ++ L+ DLQR +PHY+ISVP ++E L G + + +AR+ + R+
Sbjct: 259 LLACGCAQTYTNLKQLRPDLQRVRPHYLISVPRLWEALLGGFEDALAAMPSARQKLLRSA 318
Query: 181 IRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAIL-WPLHLLAEKLVYKK 239
+ +S + +R+ L L A A+L WPLH LA ++++ K
Sbjct: 319 LGLSRYHCLSRRVAADRTLAPEPAGRRLLAA---------GGALLSWPLHGLASRVLWPK 369
Query: 240 IQSAI--GISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 297
++ + G + +SGGG+L +H+D F+EA+G+++ VGYGLTE+SPV+ RR N GS
Sbjct: 370 VRQQLIGGRLRTAISGGGALAIHVDGFFEAVGIELLVGYGLTETSPVLTCRRRWNNRRGS 429
Query: 298 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 357
G P+ T I+IVD E+ +L G +G V +G QVMQGY P AT + LD++GW +TG
Sbjct: 430 SGQPLPGTAIRIVDPESGALLQIGQRGRVLAQGPQVMQGYLGKPEATAKVLDQEGWFDTG 489
Query: 358 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 417
D+G + G LVL GRAKDTIVLS+GEN+EP LEE + +L+ Q++V+
Sbjct: 490 DLGQLL----------ADGTLVLTGRAKDTIVLSSGENIEPGPLEECLVACTLVEQVMVV 539
Query: 418 GQDQRRPGAIIVPDKEEV 435
GQD++ GA++VP E +
Sbjct: 540 GQDRKALGALVVPKLEAL 557
>gi|254431287|ref|ZP_05044990.1| long-chain-fatty-acid--CoA ligase [Cyanobium sp. PCC 7001]
gi|197625740|gb|EDY38299.1| long-chain-fatty-acid--CoA ligase [Cyanobium sp. PCC 7001]
Length = 663
Score = 320 bits (819), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 165/377 (43%), Positives = 243/377 (64%), Gaps = 20/377 (5%)
Query: 61 IATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF 120
+AT +YTSGTTG PKGV LTH NLLHQ+R L V GD+ +S+LP WH YER+ YF
Sbjct: 220 LATILYTSGTTGQPKGVPLTHANLLHQLRHLGVAVTPHPGDRVVSVLPIWHSYERSAEYF 279
Query: 121 IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARAL 180
+ + G YT +++L+ DLQR +PHY+ISVP ++E + SG + + +R+ + RA
Sbjct: 280 LLACGCHQSYTTLKHLRPDLQRVRPHYLISVPRLWEAILSGFEDALRAMPTSRQRLLRAA 339
Query: 181 IRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKI 240
+ S A +R L R++ P+ + A ++ L + WPLH LAE +++ K+
Sbjct: 340 LANSRAQALARRRARDLTL-RHEPLPTRVCAAVEAL-------LRWPLHRLAEAVLWPKV 391
Query: 241 QSAI--GISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSV 298
+S + G + +SGGG+L +H+D F+EAIG+++ VGYGLTE+SPV+ RRP N GS
Sbjct: 392 RSQLVGGRLRTAISGGGALALHVDAFFEAIGIELLVGYGLTETSPVLTCRRPWANRRGSA 451
Query: 299 GHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGD 358
G P+ T I+I D ET++ + G +G+V RG QVM GY++ P A+ + LD +GW +TGD
Sbjct: 452 GQPLPGTAIRIADPETHQPVAVGRRGLVLARGPQVMGGYWRKPEASAKVLDGEGWFDTGD 511
Query: 359 IGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIG 418
+G + P G LVL GRAKDTIVLS+GEN+EP LE+A + S LI Q++++G
Sbjct: 512 LGHLLPD----------GSLVLTGRAKDTIVLSSGENIEPGPLEDALVASPLIEQVMLVG 561
Query: 419 QDQRRPGAIIVPDKEEV 435
QD+++ G ++VP E +
Sbjct: 562 QDRKQLGGLLVPRPEAL 578
>gi|148242895|ref|YP_001228052.1| long-chain acyl-CoA synthetase [Synechococcus sp. RCC307]
gi|147851205|emb|CAK28699.1| Long-chain acyl-CoA synthetase [Synechococcus sp. RCC307]
Length = 650
Score = 318 bits (814), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 173/433 (39%), Positives = 246/433 (56%), Gaps = 36/433 (8%)
Query: 1 MRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDD 60
+RF++LL G+ P +P+ S+ E++ G +
Sbjct: 153 LRFVLLLHGE----VPASGASVPLLSWQELLASGVHRSAVLEPAEGPESR---------- 198
Query: 61 IATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF 120
+AT +YTSGTTG PKGV L+ NLLHQ+R+L V + G++ LS+LP WH YER+ GY
Sbjct: 199 LATILYTSGTTGRPKGVPLSQANLLHQVRTLGVAVSPQPGERVLSVLPIWHAYERSAGYL 258
Query: 121 IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARAL 180
+ SRG YT +R K DLQR +PHY+ISVP ++E LY G Q + A+++ + R
Sbjct: 259 LLSRGCSQSYTNLRQFKGDLQRVRPHYLISVPRLWEALYGGFQGALEGMPASKQKLLRTA 318
Query: 181 IRISFAYTAFKRIYEGFC---LTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVY 237
+ S + R + L +++ +A + W+ A + +LWP
Sbjct: 319 LAASQTHARSLRQWRDLADHPLLWSERLAGLALAGLSWVPAALAGQLLWP---------A 369
Query: 238 KKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 297
+ Q A G +SGGG+LP HID F+EAIG+++ VGYGLTE+SPV++ RR N GS
Sbjct: 370 VRRQLAGGSLGTAISGGGALPKHIDAFFEAIGIELLVGYGLTETSPVLSCRRRWANRRGS 429
Query: 298 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 357
G P+ TE+KIVD ++ L G +G+V RG QVM+GY P AT + LD + W NTG
Sbjct: 430 AGRPLPGTELKIVDPDSRRTLQQGERGLVLARGPQVMKGYLNRPEATGEVLDTEAWFNTG 489
Query: 358 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 417
D+G + G L L GRAKDTIVLS+GEN+EP LE+ S L+ Q++V+
Sbjct: 490 DLGHLL----------ADGSLFLTGRAKDTIVLSSGENIEPGPLEDELAASELVEQVMVV 539
Query: 418 GQDQRRPGAIIVP 430
GQDQR+ GA++VP
Sbjct: 540 GQDQRQLGALVVP 552
>gi|352096361|ref|ZP_08957241.1| AMP-dependent synthetase and ligase [Synechococcus sp. WH 8016]
gi|351677055|gb|EHA60206.1| AMP-dependent synthetase and ligase [Synechococcus sp. WH 8016]
Length = 648
Score = 318 bits (814), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 179/412 (43%), Positives = 252/412 (61%), Gaps = 26/412 (6%)
Query: 65 VYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSR 124
+YTSGTTG PKGV LTH NLLHQ+RSL + E G LS+LP WH YER+ Y+ FS
Sbjct: 205 LYTSGTTGQPKGVPLTHANLLHQMRSLSCVARPEPGAPVLSVLPIWHAYERSAEYYFFSC 264
Query: 125 GIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRIS 184
YT ++ LK DL R +P M++VP ++E + +G + + T A+R+ + RA + S
Sbjct: 265 ACSQSYTTIKQLKRDLPRVKPVVMVTVPRLWEAVQAGFEDVLKTFPASRQRLLRAALANS 324
Query: 185 FAYTAFKRIYEGFCLTRNQKQPSYLVAL--IDWLWARIICAILWPLHLLAEKLVYKKI-- 240
AY CL R Q++ L+ L + AR+ A WP H LA KL++ K+
Sbjct: 325 SAY----------CLARRQRRNLMLMPLGRRQRMMARLKSAGRWPAHALASKLIWPKLRL 374
Query: 241 QSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGH 300
Q + G + ++GGG++ H+D F+EA+G+++ VGYGLTE+SPV++ RRP N+ GS G
Sbjct: 375 QLSGGQLRFPINGGGAIAPHVDSFFEAVGIELLVGYGLTETSPVVSCRRPWRNIRGSSGQ 434
Query: 301 PINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIG 360
P+ TE +IVDAET + L G+V VRG QVM GY + P AT + LD DGW +TGD+G
Sbjct: 435 PLPDTEFRIVDAETRQPLGFRECGVVLVRGPQVMAGYLRRPEATAKVLDADGWFDTGDLG 494
Query: 361 WIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQD 420
+ P G +VL GRAKDTIVLS+GEN+EP LEE + S LI Q++++GQD
Sbjct: 495 MLLPD----------GSVVLTGRAKDTIVLSSGENIEPAPLEEELVSSPLIEQVMLVGQD 544
Query: 421 QRRPGAIIVPDKEEVLM-AAKRLSIVHADASELSKEKTI-SLLYGELRKWTS 470
QR+ A++VP E +L A++ + AD ++ + LL GEL + S
Sbjct: 545 QRQLAALVVPRLEAMLAWGAEQGLRLPADLGGTPGDQDLRRLLRGELNRLLS 596
>gi|87301166|ref|ZP_01084007.1| putative long-chain-fatty-acid--CoA ligase [Synechococcus sp. WH
5701]
gi|87284134|gb|EAQ76087.1| putative long-chain-fatty-acid--CoA ligase [Synechococcus sp. WH
5701]
Length = 653
Score = 312 bits (800), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 185/497 (37%), Positives = 276/497 (55%), Gaps = 35/497 (7%)
Query: 1 MRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDD 60
+RF+++L + S +P L E+ +A S DA + G +
Sbjct: 155 LRFVVVLEDRAPSGNGTPPSPVPR-------QLSWEAFEALGCSQDA-AAPPLPSGGPER 206
Query: 61 IATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF 120
+AT +YTSGTTG PKGV L+ NLLHQ+R+L V D+ LS+LP WH YER YF
Sbjct: 207 LATLLYTSGTTGRPKGVPLSQANLLHQLRTLGVAVAPRPADRVLSVLPIWHAYERTAEYF 266
Query: 121 IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARAL 180
+ S G YT +++L+ DLQR +P YMISVP ++E L +G + + +R+ + R
Sbjct: 267 LLSCGCRQSYTTLKHLRPDLQRVRPQYMISVPRLWEALLAGFEDALEAMPPSRQGLIRQA 326
Query: 181 IRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKI 240
+R+S + +R L ++ P L A + WL + WP H LA L++ K+
Sbjct: 327 LRLSRWHGQSRRRALDLTL-ESESLPGRLAAGLGWL-------LSWPGHGLASVLLWPKV 378
Query: 241 QSAI--GISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSV 298
+ + G + +SGGG+L +H+D F+EAIG+++ VGYGLTE+SPV+A RRP N GS
Sbjct: 379 RQQLSGGALRTAISGGGALALHVDGFFEAIGIELLVGYGLTETSPVLACRRPWRNRRGSA 438
Query: 299 GHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGD 358
G P+ TE++IVD ++ L +G V RG QVM GYF P AT LD GW +TGD
Sbjct: 439 GQPLPETELRIVDPDSGAALGWRQRGRVLARGPQVMAGYFGKPEATAAVLDAAGWFDTGD 498
Query: 359 IGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIG 418
+G + G LVL GRAKDTIVLS+GEN+EP LEEA + L+ Q++++G
Sbjct: 499 LGHLL----------ADGTLVLTGRAKDTIVLSSGENIEPGPLEEALVAHPLVEQVMLVG 548
Query: 419 QDQRRPGAIIVPDKEEVLMAAKRLSI-VHADASELSKEKTISLLYGELRKW-----TSKC 472
QD+R+ A++VP E + A+ + V ++ + + L GE + S+
Sbjct: 549 QDRRQLAALVVPRPEPLAAFARARELPVPGTTADPADRALLKALSGEFNRLLAARPGSRP 608
Query: 473 SFQIGPIHVVDEPFTVN 489
++ + +V EPF++
Sbjct: 609 DERLAGVALV-EPFSIE 624
>gi|452822005|gb|EME29029.1| long-chain acyl-CoA synthetase [Galdieria sulphuraria]
Length = 762
Score = 311 bits (798), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 181/446 (40%), Positives = 270/446 (60%), Gaps = 53/446 (11%)
Query: 1 MRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDD 60
++F I+LWGK P ++ +FS+D +I G ++ N+ + S D
Sbjct: 242 LKFAIILWGK----VPTDFPQLKIFSFDSLIQEG------WNYQNEVSVPFA----SSSD 287
Query: 61 IATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDI-----VPAENGDKFLSMLPPWHVYER 115
+AT +YTSGTTG PKGV LTH+NLL+QI S+ DI VP G+ F+S+LP WHV+ER
Sbjct: 288 LATLIYTSGTTGRPKGVELTHENLLYQIASI-DIGKCCPVP---GNVFVSILPCWHVFER 343
Query: 116 ACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 175
YF F+RG+ ++Y+ VRNL++DLQ ++P ++++VP V+E+LY+ I I S RR
Sbjct: 344 TAEYFFFARGVCVVYSNVRNLRNDLQLHKPQFLVAVPRVFESLYNNIMSNISKQSLMRRY 403
Query: 176 VARALIRISFAY-TAFKRIYEGFCLTRNQKQPSYLVALID---W--LWARIICAILWPLH 229
+ R IS +Y AF+ ++ S + ID W L A + L+ H
Sbjct: 404 LIRMFTFISLSYHRAFRTLF------------SLDIFRIDSRFWKKLKAFFVLIALFTFH 451
Query: 230 LLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAAR 288
LA +V+ KI+S +G + G+ GGGSLP +++ FY + GV + VGYGLTE+SPV++ R
Sbjct: 452 KLANWIVWSKIRSVLGGRVQCGICGGGSLPFYLEEFYASTGVCLLVGYGLTETSPVVSHR 511
Query: 289 RPTC-NVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQA 347
RP N+LGS G + T++K+V ET E L G G++ VRG V++GY++ P +
Sbjct: 512 RPGLENMLGSSGRCLPGTQVKVVHPETKEELKHGDIGLLLVRGPGVVRGYYREPERSDVF 571
Query: 348 LDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALR 407
L EDG+ N+GD+ WI P++ G +V+ GR KD IVL+ GEN+EP +E+A L
Sbjct: 572 L-EDGFFNSGDLAWIVPNN---------GHIVISGRYKDVIVLNNGENIEPQPIEDAILE 621
Query: 408 SSLIRQIVVIGQDQRRPGAIIVPDKE 433
S L Q++++GQD+R GA++VP E
Sbjct: 622 SPLFDQVILVGQDERHLGALLVPSLE 647
>gi|254421740|ref|ZP_05035458.1| AMP-binding enzyme, putative [Synechococcus sp. PCC 7335]
gi|196189229|gb|EDX84193.1| AMP-binding enzyme, putative [Synechococcus sp. PCC 7335]
Length = 640
Score = 308 bits (788), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 185/497 (37%), Positives = 283/497 (56%), Gaps = 43/497 (8%)
Query: 1 MRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDD 60
+RFIILL + ++ D+ + ++ E++ LG E A K E D
Sbjct: 148 LRFIILLTDEVAASETDL-GGAKLLNFSELMALGAE--------QGAPTPVKLE---RDR 195
Query: 61 IATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF 120
AT +YTSGT+G PKGVMLT NLL QI +V K LS+LP WH YER+ YF
Sbjct: 196 TATLMYTSGTSGMPKGVMLTQSNLLSQIAGASSVVNVGPEQKVLSILPIWHCYERSFEYF 255
Query: 121 IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARAL 180
+ S+G +YT +R +K D + + P YM++VP ++E++Y G+Q+Q + ++ + R
Sbjct: 256 VLSQGCTQIYTNIRTVKRDFKEHSPQYMVAVPRLWESIYDGVQRQFQSQPEGKQKLIRFF 315
Query: 181 IRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKI 240
+ Y +R G L + L A + A LWP++ + +++V+ KI
Sbjct: 316 LEKGHEYITARRTLSGLRLDHLTSSTG------EKLAAALKLAYLWPIYQIGDRIVFSKI 369
Query: 241 QSAIGISKAG--VSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSV 298
+ A+G K VSGGGS+ +++ FYE +G+ + GYGLTE+SP+ RRP N+ G+
Sbjct: 370 REAMG-GKVDFLVSGGGSIADYLEDFYEVVGIPILGGYGLTETSPITHVRRPWRNLRGAD 428
Query: 299 GHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGD 358
G + TE IVD ET + +P G G+V +RG QVM+GY+KN AT +A+D +GW +TGD
Sbjct: 429 GQALPGTETAIVDPETRQPIPIGKPGLVLLRGPQVMKGYYKNAEATAKAIDSEGWFDTGD 488
Query: 359 IGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIG 418
+G + G L++ GRAKDTIVL+ GEN+EP +E A LRS + QI+++G
Sbjct: 489 LGRLTDW----------GDLIITGRAKDTIVLTNGENIEPTPVENACLRSPYVDQIMLVG 538
Query: 419 QDQRRPGAIIVPDKE--EVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTS-----K 471
QDQ+ GA+IVP+KE E A+K +S+ +L+ + L EL++ S +
Sbjct: 539 QDQKSVGALIVPNKEVLEKWAASKGVSM-----EDLNSKPIQDLYKQELKREISARPGYR 593
Query: 472 CSFQIGPIHVVDEPFTV 488
++GP +++EPFT+
Sbjct: 594 PDERVGPFVLLEEPFTI 610
>gi|87125603|ref|ZP_01081448.1| putative long-chain-fatty-acid--CoA ligase [Synechococcus sp.
RS9917]
gi|86166903|gb|EAQ68165.1| putative long-chain-fatty-acid--CoA ligase [Synechococcus sp.
RS9917]
Length = 648
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 191/498 (38%), Positives = 277/498 (55%), Gaps = 43/498 (8%)
Query: 1 MRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDD 60
+RF++ L G+ AP+ V +D + R D R+ T
Sbjct: 156 LRFVLQLEGE----APE-----GVLDFDTFLAHADGQRPPDPDQGRGRESAATTT----- 201
Query: 61 IATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF 120
AT +YTSGTTG PKGV L+H NLLHQ+RSL + E G LS+LP WH YER+ Y+
Sbjct: 202 -ATILYTSGTTGQPKGVPLSHGNLLHQMRSLACVARPEPGTPVLSVLPIWHAYERSAEYY 260
Query: 121 IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARAL 180
FS YT ++ LK DL R +P M++VP ++E + +G + + T A+R+ + RA
Sbjct: 261 FFSCACSQSYTTIKQLKRDLPRVKPVVMVTVPRLWEAVQAGFEDVLKTFPASRQRLLRAA 320
Query: 181 IRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKI 240
+ S AY +R L +P V D L AR WP H LA +L++ K+
Sbjct: 321 LANSSAYGLARRRSRNLML-----EP---VRRRDRLAARAEALRRWPAHALASRLIWPKL 372
Query: 241 --QSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSV 298
Q + G + ++GGG++ H+D F+EA+G+++ VGYGLTE+SPV++ RRP N+ GS
Sbjct: 373 RLQLSGGQLRYPINGGGAIAPHVDAFFEAVGIELLVGYGLTETSPVVSCRRPWHNIRGSS 432
Query: 299 GHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGD 358
G P+ TE +IVD ++ L +G+V VRG QVM GY P AT + LD DGW +TGD
Sbjct: 433 GLPMPDTEFRIVDPDSRAPLGFPQRGVVLVRGPQVMAGYLGKPEATAKVLDADGWFDTGD 492
Query: 359 IGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIG 418
+G + P G +VL GRAKDTIVLS+GEN+EP LEEA + S LI Q++++G
Sbjct: 493 LGMLLPD----------GSVVLTGRAKDTIVLSSGENIEPGPLEEALVASDLIEQVMLVG 542
Query: 419 QDQRRPGAIIVPDKEEV--LMAAKRLSIVHADASELSKEKTISLLYGELRKWT-----SK 471
QD+R+ GA++VP E + A + L + + + LL GEL + S+
Sbjct: 543 QDERQLGALVVPRAEAMRAWAADQGLQLAEDLGGSPGDDNLLRLLRGELNRLLSQRPGSR 602
Query: 472 CSFQIGPIHVVDEPFTVN 489
++ I +V EPF++
Sbjct: 603 ADERLAGIALV-EPFSIE 619
>gi|159902941|ref|YP_001550285.1| long-chain-fatty-acid--CoA ligase [Prochlorococcus marinus str. MIT
9211]
gi|159888117|gb|ABX08331.1| putative long-chain-fatty-acid--CoA ligase [Prochlorococcus marinus
str. MIT 9211]
Length = 664
Score = 304 bits (778), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 171/438 (39%), Positives = 254/438 (57%), Gaps = 34/438 (7%)
Query: 1 MRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDD 60
++F+++L G+ + + ++D D +E+ FS + K Y
Sbjct: 167 LKFVLVLEGQSTD---------SLLAWD---DFFQEASTNFSI--EVPKKASYGDKSDSP 212
Query: 61 IATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF 120
IAT +YTSGTTG PKGV LTH N LHQI SL I G LS+LP WH YER+ Y+
Sbjct: 213 IATILYTSGTTGKPKGVPLTHANFLHQISSLACIANPSPGTPLLSVLPIWHSYERSAEYY 272
Query: 121 IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARAL 180
FS G YT +++ K+DLQR +P M +VP ++E++ G I + R+ + +A
Sbjct: 273 FFSCGCTQNYTTIKHFKEDLQRVKPVVMATVPRLWESVKIGFDDAIKKMPSFRQNIIKAA 332
Query: 181 IRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKI 240
+ S AY R + V ++ ++A A+ WP+H ++ L++ K+
Sbjct: 333 LNNSGAYKLALRKLRNLLIND--------VFFLERIFALGEVALRWPVHFMSSCLLWPKV 384
Query: 241 QSAI--GISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSV 298
+ + G ++GGG++ H+D F+E++GV++ VGYGLTE+SPV++ RRP N+ GS
Sbjct: 385 LTQLCGGRLLFPINGGGAIAPHVDQFFESLGVELLVGYGLTETSPVLSCRRPWRNIRGSS 444
Query: 299 GHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGD 358
G P+ T +IVD E V+ KG+V +G QVM+GY N AT + DE+GW NTGD
Sbjct: 445 GPPLPETAFRIVDPEDGRVMNYREKGLVLAKGPQVMKGYLGNLKATAKVFDEEGWFNTGD 504
Query: 359 IGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIG 418
+G + P G LVL GRAKDTIVLS+GEN+EP LEE + S LI+QI+++G
Sbjct: 505 LGMLLPD----------GSLVLTGRAKDTIVLSSGENIEPGPLEEVLVASPLIKQIMLVG 554
Query: 419 QDQRRPGAIIVPDKEEVL 436
QDQ++ GA++VP+ E+VL
Sbjct: 555 QDQKQLGALVVPNAEQVL 572
>gi|88809271|ref|ZP_01124780.1| putative long-chain-fatty-acid--CoA ligase [Synechococcus sp. WH
7805]
gi|88787213|gb|EAR18371.1| putative long-chain-fatty-acid--CoA ligase [Synechococcus sp. WH
7805]
Length = 647
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 176/435 (40%), Positives = 256/435 (58%), Gaps = 35/435 (8%)
Query: 1 MRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDD 60
+RF+++L G+ APD FS+D L R D AR+ +
Sbjct: 155 LRFVLVLEGE----APD-----GAFSFDAF--LARGELALAPDPLLARERAS----ATST 199
Query: 61 IATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF 120
AT +YTSGTTG PKGV L+H NLLHQ+RSL + E GD LS+LP WH YER+ Y+
Sbjct: 200 TATLLYTSGTTGRPKGVPLSHANLLHQMRSLACVARPEAGDPVLSVLPIWHAYERSAEYY 259
Query: 121 IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARAL 180
FS YT ++ LK DL R +P M++VP ++E + +G + T AR+ + +A
Sbjct: 260 FFSCACSQSYTTIKQLKRDLPRVRPVVMVTVPRLWEAVQAGFDDVLKTFPPARQRLLKAA 319
Query: 181 IRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKI 240
+ S AY +R L +K+ D + A + WP H LA +L++ ++
Sbjct: 320 LANSAAYALARRRSRNLMLDPVRKR--------DRVIAAAEASSRWPAHALAARLIWPQV 371
Query: 241 QSAI--GISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSV 298
+ + G + ++GGG++ H+D F+EA+G+++ VGYGLTE+SPV++ RRP N+ GS
Sbjct: 372 RRQLSGGSLRFPINGGGAIAPHVDSFFEAVGIELLVGYGLTETSPVVSCRRPWRNIRGSS 431
Query: 299 GHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGD 358
G P+ TE +I+DAET L +G+V+VRG QVM+GY P AT + LD +GW +TGD
Sbjct: 432 GLPMPETEFRILDAETRLPLGYRQRGVVQVRGPQVMRGYLGKPEATAKVLDAEGWFDTGD 491
Query: 359 IGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIG 418
+G + P G +VL GRAKDTIVLS+GEN+EP LEE + S LI Q++++G
Sbjct: 492 LGLLLPD----------GSVVLTGRAKDTIVLSSGENIEPGPLEETLVASPLIEQVMLVG 541
Query: 419 QDQRRPGAIIVPDKE 433
QD+R+ GA++VP E
Sbjct: 542 QDERQLGALVVPRLE 556
>gi|116075040|ref|ZP_01472300.1| putative long-chain-fatty-acid--CoA ligase [Synechococcus sp.
RS9916]
gi|116067237|gb|EAU72991.1| putative long-chain-fatty-acid--CoA ligase [Synechococcus sp.
RS9916]
Length = 658
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 174/439 (39%), Positives = 257/439 (58%), Gaps = 32/439 (7%)
Query: 62 ATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFI 121
AT +YTSGTTG PKGV LTH NLLHQIRSL + G LS+LP WH YER+ Y+
Sbjct: 212 ATILYTSGTTGQPKGVPLTHANLLHQIRSLACVAHPAPGSPVLSVLPIWHSYERSAEYYF 271
Query: 122 FSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALI 181
FS YT ++ LK DL R +P M +VP ++E + +G + + T A+R+ + R+ +
Sbjct: 272 FSCACSQSYTTIKQLKKDLPRVKPVVMATVPRLWEAVQAGFEDVLKTFPASRQRLLRSAL 331
Query: 182 RISFAYTAFKRIYEGFCLTRNQKQPSYLVAL--IDWLWARIICAILWPLHLLAEKLVYKK 239
S AY CL R + + + +L L A + + WP H +A KL++ K
Sbjct: 332 ANSSAY----------CLARRRSRDLMVESLGKRQRLKAALEASRRWPAHAVASKLIWPK 381
Query: 240 I--QSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 297
+ Q + G + ++GGG++ H+D FYEA+G+++ VGYGLTE+SPV++ RRP N+ GS
Sbjct: 382 LRLQLSGGQLQFPINGGGAIAPHVDAFYEAVGIELLVGYGLTETSPVVSCRRPWRNIRGS 441
Query: 298 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 357
G P+ TE +IVD ET L +G+V VRG QVM GY P AT + LD +GW +TG
Sbjct: 442 SGQPLPDTEFRIVDPETRAPLGFRERGVVLVRGPQVMGGYLGKPEATAKVLDGEGWFDTG 501
Query: 358 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 417
D+G + P G +VL GRAKDTIVLS+GEN+EP LEE + S L+ Q++++
Sbjct: 502 DLGLLLPD----------GSVVLTGRAKDTIVLSSGENIEPGPLEECLVASPLVEQVMLV 551
Query: 418 GQDQRRPGAIIVPDKE--EVLMAAKRLSIVHADASELSKEKTISLLYGELRKWT-----S 470
GQD+++ GA++VP E + A + LS+ + + LL GE + +
Sbjct: 552 GQDEKQLGALVVPRLEAIQAWAAEQGLSLADDLGGSPGEPALLKLLRGEFNRLLAGRHGA 611
Query: 471 KCSFQIGPIHVVDEPFTVN 489
+ ++ + +V +PFT++
Sbjct: 612 RADERLAGVGLV-QPFTID 629
>gi|78184237|ref|YP_376672.1| long-chain-fatty-acid--CoA ligase [Synechococcus sp. CC9902]
gi|78168531|gb|ABB25628.1| putative long-chain-fatty-acid--CoA ligase [Synechococcus sp.
CC9902]
Length = 645
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 173/446 (38%), Positives = 259/446 (58%), Gaps = 34/446 (7%)
Query: 56 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYER 115
I ++ +AT +YTSGTTG PKGV LTH NLLHQIRSL + + GD LS+LP WH YER
Sbjct: 193 IAANQVATILYTSGTTGQPKGVPLTHANLLHQIRSLACVAYPKPGDPVLSVLPIWHAYER 252
Query: 116 ACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 175
+ YF S YT ++ LK DL R QP M +VP ++E++ +G + + T +R+
Sbjct: 253 SASYFFLSCACTQTYTTIKQLKKDLPRVQPIAMATVPRLWESVQAGFEDVVKTFPPSRQR 312
Query: 176 VARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDW---LWARIICAILWPLHLLA 232
+ RA + S A R + + ++ + W A + + WPLH LA
Sbjct: 313 LLRAALSNSSAQRQALR-----------RASNLMLEPVPWAGRFQAAGVALLRWPLHALA 361
Query: 233 EKLVYKKIQSAIGISKAG--VSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRP 290
L++ K++ + + +SGGG++ HID F+EA+G+++ VGYGLTE+SPVI+ RRP
Sbjct: 362 SALLWPKVRRQLSGGQLAYPISGGGAIAPHIDAFFEAVGIELLVGYGLTETSPVISCRRP 421
Query: 291 TCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDE 350
N+ GS G P+ TE +IVD E+ +L +G V VRG QVM GY+ P AT + LD
Sbjct: 422 WHNIRGSSGLPLPGTEFRIVDPESGTLLGCRQRGRVLVRGPQVMAGYWGKPDATAKVLDA 481
Query: 351 DGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSL 410
DGW +TGD+G + G + L GRAKDTIVLS+GEN+EP LEE + S L
Sbjct: 482 DGWFDTGDLGMLL----------ADGSVALTGRAKDTIVLSSGENIEPGPLEEVLVASPL 531
Query: 411 IRQIVVIGQDQRRPGAIIVPDKEEVLMAAKR--LSIVHADASELSKEKTISLLYGELRKW 468
I Q++++GQD+R+ A+IVP + +++ A + LS+ + + + + LL E +
Sbjct: 532 IEQVMLVGQDERQLAALIVPRADVIVVWAGQQGLSLANDLGGKPGDQALLRLLMQECNRL 591
Query: 469 T-----SKCSFQIGPIHVVDEPFTVN 489
++ ++ + +VD PFT++
Sbjct: 592 LKQRVGARGDERLAGVVLVD-PFTID 616
>gi|320538352|ref|ZP_08038230.1| AMP-binding enzyme [Treponema phagedenis F0421]
gi|320144796|gb|EFW36534.1| AMP-binding enzyme [Treponema phagedenis F0421]
Length = 643
Score = 302 bits (773), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 178/442 (40%), Positives = 255/442 (57%), Gaps = 32/442 (7%)
Query: 24 VFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKN 83
+F+YDEII G+E F N + DDIAT ++TSGTTG PKGVMLTHKN
Sbjct: 162 IFTYDEIILKGKE----FRVQNPDYVEKQIAETKPDDIATIIFTSGTTGTPKGVMLTHKN 217
Query: 84 LLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN--LKDDLQ 141
L Q+ L + G++ LS+LP WHV+ER C Y I + Y+ L D
Sbjct: 218 FLSQLPELSKRIILYPGERALSVLPVWHVFERLCEYAIIHAAAGIAYSKPIGSILLADFA 277
Query: 142 RYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRI-SFAYTAFKRIYEGFCLT 200
+ PH + SVP ++E ++ G+ KQ+ + + ++ + + +R+++ T
Sbjct: 278 KINPHLLPSVPRIWEAVHDGVFKQLRKKGGISYALFKFFLKAGNLRFHYHRRLFKNVAYT 337
Query: 201 -RNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLP 258
+ +K + +A I WL +L P+HLL + LV+ KI+ +G + +AGVSGGG+LP
Sbjct: 338 SQAEKTVAPFLAFIPWL-------LLTPIHLLGDALVFSKIRLKLGKNFRAGVSGGGALP 390
Query: 259 MHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVL 318
+ID F+ GV V GYGLTE++PV+A R + + G++G P N+ ++K+VD +T + L
Sbjct: 391 GNIDEFFWTAGVTVVEGYGLTETAPVVAVRSVSHPIFGTIGTPCNYNQVKVVD-DTGKTL 449
Query: 319 PAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVL 378
P G +G+V VRG VM+GYFK P T+ +D+DGW NTGDIG+I GG +
Sbjct: 450 PMGEQGVVYVRGDNVMKGYFKRPELTESVIDKDGWFNTGDIGYIC----------LGGEI 499
Query: 379 VLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMA 438
VL GR KDTIVL GEN+EP+ +E S I VV+GQDQR GA+I+PD+ E+
Sbjct: 500 VLRGRLKDTIVLRGGENIEPVPIEMRLQESQYISLAVVVGQDQRYLGALILPDEAELQAW 559
Query: 439 AKRLSIVHADASELSKEKTISL 460
AK I +E S EK I L
Sbjct: 560 AKSQHI-----AEESMEKLIEL 576
>gi|260435335|ref|ZP_05789305.1| long-chain acyl-CoA synthetase [Synechococcus sp. WH 8109]
gi|260413209|gb|EEX06505.1| long-chain acyl-CoA synthetase [Synechococcus sp. WH 8109]
Length = 637
Score = 301 bits (772), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 167/393 (42%), Positives = 232/393 (59%), Gaps = 20/393 (5%)
Query: 57 GSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERA 116
G D +AT +YTSGTTG PKGV LTH NLLHQ+ SL + E G LS+LP WH YER+
Sbjct: 186 GRDAVATVLYTSGTTGQPKGVPLTHANLLHQMSSLACVAYPEPGAPVLSVLPIWHAYERS 245
Query: 117 CGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 176
YF S G YT ++ LK DL R +P M +VP ++E + +G + + T +R+ +
Sbjct: 246 ASYFFLSCGCTQTYTTIKQLKKDLPRVRPIAMATVPRLWEAVQAGFEDVLKTFPPSRQRL 305
Query: 177 ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLV 236
RA + S A R L +P V+ D L A A+ WPLH LA L+
Sbjct: 306 LRAALANSAAQRKALRTARNLLL-----EP---VSASDRLRACGSAALRWPLHALASTLI 357
Query: 237 YKKIQSAIGISKAG--VSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNV 294
+ K++ + + +SGGG++ HID F+EA+G+++ VGYGLTE+SPV++ RRP N+
Sbjct: 358 WPKLRRQLSGGQLAYPISGGGAIAPHIDAFFEAVGIELLVGYGLTETSPVVSCRRPWRNI 417
Query: 295 LGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWL 354
GS G P+ TE +IVD + + L +G V VRG QVM GY P A+ + LD GW
Sbjct: 418 RGSSGLPMPQTEFRIVDPDNGQPLGFRQRGRVMVRGPQVMAGYLGKPEASAKVLDAAGWF 477
Query: 355 NTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQI 414
+TGD+G + P G + L GRAKDTIVLS+GEN+EP LEEA + S LI Q+
Sbjct: 478 DTGDLGMLMPD----------GSVALTGRAKDTIVLSSGENIEPGPLEEALVASPLIEQV 527
Query: 415 VVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHA 447
+++GQD+R+ G +IVP E ++ A + A
Sbjct: 528 MLVGQDERQLGGLIVPRAEVIVAWAAEAGVSAA 560
>gi|113955509|ref|YP_729826.1| long-chain acyl-CoA synthetase [Synechococcus sp. CC9311]
gi|113882860|gb|ABI47818.1| Long-chain acyl-CoA synthetase [Synechococcus sp. CC9311]
Length = 632
Score = 301 bits (772), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 177/452 (39%), Positives = 262/452 (57%), Gaps = 38/452 (8%)
Query: 1 MRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDD 60
+RF++ L G +V D++ S+D+++ G E + D + +
Sbjct: 140 LRFVLQLEG--DAVDSDVI------SWDDLLAAGAEQQAPDPDLG------RDAASAAST 185
Query: 61 IATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF 120
AT +YTSGTTG PKGV L+H NLLHQ+RSL + E G LS+LP WH YER+ Y+
Sbjct: 186 TATILYTSGTTGQPKGVPLSHANLLHQMRSLSCVARPEPGAPVLSVLPIWHAYERSAEYY 245
Query: 121 IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARAL 180
FS YT ++ LK DL R +P M++VP ++E + +G + + T A+R+ + RA
Sbjct: 246 FFSCACSQSYTTIKQLKRDLPRVKPVVMVTVPRLWEAVQAGFEDVLKTFPASRQRLLRAA 305
Query: 181 IRISFAYTAFKRIYEGFCLTRNQKQPSYLVAL--IDWLWARIICAILWPLHLLAEKLVYK 238
+ S AY CL R Q+ L+ L L A + A WP H LA KL++
Sbjct: 306 LSNSSAY----------CLARRQRCNLMLMPLGRRQRLMACLKSAGRWPAHALASKLIWP 355
Query: 239 KI--QSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLG 296
K+ Q + G + ++GG ++ H+D F+EA+G+++ VGYGLTE+SPV++ RRP N+ G
Sbjct: 356 KLRLQLSGGQLRFPINGGAAIAPHVDSFFEAVGIELLVGYGLTETSPVVSCRRPWRNIRG 415
Query: 297 SVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNT 356
S G P+ TE IVD E+ L +G+V VRG QVMQGY P AT + LD DGW +T
Sbjct: 416 SSGQPMPQTEFMIVDPESRAPLSFRERGLVLVRGPQVMQGYLGKPEATAKVLDVDGWFDT 475
Query: 357 GDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVV 416
GD+G + P G +VL GRAKDTIVLS+GEN+EP LE L + ++ Q+++
Sbjct: 476 GDLGMLLPD----------GSVVLTGRAKDTIVLSSGENIEPGPLEAHLLMNPVVEQVLL 525
Query: 417 IGQDQRRPGAIIVPDKEEVLMAAKRLSIVHAD 448
+GQD+++ A+IVP+++ + A+ I + D
Sbjct: 526 VGQDKKQLAALIVPNQDGLRQFAENKEIENID 557
>gi|148238916|ref|YP_001224303.1| long-chain acyl-CoA synthetase [Synechococcus sp. WH 7803]
gi|147847455|emb|CAK23006.1| Long-chain acyl-CoA synthetase [Synechococcus sp. WH 7803]
Length = 647
Score = 301 bits (772), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 163/374 (43%), Positives = 230/374 (61%), Gaps = 20/374 (5%)
Query: 62 ATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFI 121
AT +YTSGTTG PKGV LTH NLLHQ+RSL + E GD LS+LP WH YER+ Y+
Sbjct: 201 ATLLYTSGTTGRPKGVPLTHANLLHQMRSLACVARPEAGDPVLSVLPIWHAYERSAEYYF 260
Query: 122 FSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALI 181
FS YT ++ LK DL R +P M++VP ++E + +G + T AR+ + +A +
Sbjct: 261 FSCACSQSYTTIKQLKRDLPRVRPVVMVTVPRLWEAVQAGFDDVLKTFPPARQRLLKAAL 320
Query: 182 RISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKI- 240
S A+ +R L +K+ L A + WP H LA +L++ K+
Sbjct: 321 ANSAAFALARRRSRNLLLDPVRKRDRVLAA--------AEASSRWPAHALASRLIWPKVR 372
Query: 241 -QSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVG 299
Q + G + ++GGG++ H+D F+EA+G+++ VGYGLTE+SPV++ RRP N+ GS G
Sbjct: 373 LQLSGGSLRFPINGGGAIAPHVDSFFEAVGIELLVGYGLTETSPVVSCRRPWRNIRGSSG 432
Query: 300 HPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDI 359
P+ TE +IVD ET L +G+V+VRG QVM GY P AT + LD +GW +TGD+
Sbjct: 433 LPMPETEFRIVDGETRRPLGYRQRGVVQVRGPQVMGGYLGKPEATAKVLDAEGWFDTGDL 492
Query: 360 GWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQ 419
G + P G +VL GRAKDTIVLS+GEN+EP LEE + S LI Q++++GQ
Sbjct: 493 GLLLPD----------GSVVLTGRAKDTIVLSSGENIEPGPLEETLVASPLIEQVMLVGQ 542
Query: 420 DQRRPGAIIVPDKE 433
D+R+ GA++VP E
Sbjct: 543 DERQLGALVVPRLE 556
>gi|33865203|ref|NP_896762.1| long-chain-fatty-acid--CoA ligase [Synechococcus sp. WH 8102]
gi|33638887|emb|CAE07184.1| putative long-chain-fatty-acid--CoA ligase [Synechococcus sp. WH
8102]
Length = 637
Score = 300 bits (769), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 163/377 (43%), Positives = 230/377 (61%), Gaps = 20/377 (5%)
Query: 61 IATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF 120
IAT +YTSGTTG PKGV LTH NLLHQ++SL + + G LS+LP WH YER+ Y+
Sbjct: 190 IATVLYTSGTTGQPKGVPLTHANLLHQMQSLACVAHPQPGAPVLSVLPIWHAYERSASYY 249
Query: 121 IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARAL 180
S YT ++ LK DL R +P M +VP ++E++ +G + + T +R+ + RA
Sbjct: 250 FLSCACTQTYTNIKQLKKDLPRVRPIAMATVPRLWESVQAGFEDVVKTFPPSRQRLLRAA 309
Query: 181 IRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKI 240
+ S A+ R L QP VAL + A + A+ WPLH LA L++ K+
Sbjct: 310 LANSAAHRKAVRTARNLLL-----QP---VALPGRMTAAAVAALRWPLHALASALIWPKL 361
Query: 241 QSAIGISKAG--VSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSV 298
+ + + +SGGG++ HID F+EA+G+++ VGYGLTE+SPV++ RRP N+ GS
Sbjct: 362 RLQLSGGRLAYPISGGGAIAPHIDAFFEAVGIELLVGYGLTETSPVVSCRRPWRNIRGSS 421
Query: 299 GHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGD 358
G P+ TE +IVD E+ L +G V VRG QVM GY P A+ + L DGW +TGD
Sbjct: 422 GLPMPDTEFRIVDQESGASLGFRERGRVLVRGPQVMGGYLGKPEASAKVLSADGWFDTGD 481
Query: 359 IGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIG 418
+G + P G + L GRAKDTIVLS+GEN+EP LEEA + S LI Q++++G
Sbjct: 482 LGMLLPD----------GSVALTGRAKDTIVLSSGENIEPGPLEEALVASPLIEQVMLVG 531
Query: 419 QDQRRPGAIIVPDKEEV 435
QD+R+ GA++VP E +
Sbjct: 532 QDERQLGALLVPRVEPI 548
>gi|78213528|ref|YP_382307.1| long-chain-fatty-acid--CoA ligase [Synechococcus sp. CC9605]
gi|78197987|gb|ABB35752.1| putative long-chain-fatty-acid--CoA ligase [Synechococcus sp.
CC9605]
Length = 637
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 174/442 (39%), Positives = 252/442 (57%), Gaps = 28/442 (6%)
Query: 57 GSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERA 116
G D +AT +YTSGTTG PKGV LTH NLLHQ+ SL + E G LS+LP WH YER+
Sbjct: 186 GRDAVATVLYTSGTTGQPKGVPLTHANLLHQMSSLACVAYPEPGAPVLSVLPIWHAYERS 245
Query: 117 CGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 176
YF S YT ++ LK DL R +P M +VP ++E + +G + + T +R+ +
Sbjct: 246 ASYFFLSCACTQTYTTIKQLKKDLPRVRPIAMATVPRLWEAVQAGFEDVLKTFPPSRQRL 305
Query: 177 ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLV 236
RA + S A R L +P V+ L A A+ WPLH LA L+
Sbjct: 306 LRAALANSAAQRKAVRTARNLLL-----EP---VSASGRLRACGSAALRWPLHALASTLI 357
Query: 237 YKKIQSAIGISKAG--VSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNV 294
+ K++ + + +SGGG++ HID F+EA+G+++ VGYGLTE+SPV++ RRP N+
Sbjct: 358 WPKLRRQLSGGQLAYPISGGGAIAPHIDAFFEAVGIELLVGYGLTETSPVVSCRRPWRNI 417
Query: 295 LGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWL 354
GS G P+ TE +IVD + + L +G V VRG QVM GY P A+ + LD GW
Sbjct: 418 RGSSGLPMPQTEFRIVDPDNGQPLGFRQRGRVMVRGPQVMVGYLGKPEASAKVLDTAGWF 477
Query: 355 NTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQI 414
+TGD+G + P G + L GRAKDTIVLS+GEN+EP LEEA + S LI Q+
Sbjct: 478 DTGDLGMLLPD----------GSVALTGRAKDTIVLSSGENIEPGPLEEALVASPLIEQV 527
Query: 415 VVIGQDQRRPGAIIVPDKEEVLMAAKR--LSIVHADASELSKEKTISLLYGEL-----RK 467
+++GQD+R+ GA+IVP E ++ A +++ + + LL E ++
Sbjct: 528 MLVGQDERQLGALIVPRAEAIVAWAAEACVNVAQDLGGQPGDPALLRLLMRECNRLLKQR 587
Query: 468 WTSKCSFQIGPIHVVDEPFTVN 489
W S+ ++ + +VD PF++
Sbjct: 588 WGSRGDERLAGVVLVD-PFSIE 608
>gi|116071118|ref|ZP_01468387.1| putative long-chain-fatty-acid--CoA ligase [Synechococcus sp.
BL107]
gi|116066523|gb|EAU72280.1| putative long-chain-fatty-acid--CoA ligase [Synechococcus sp.
BL107]
Length = 653
Score = 298 bits (764), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 173/442 (39%), Positives = 256/442 (57%), Gaps = 28/442 (6%)
Query: 57 GSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERA 116
GS+ +AT +YTSGTTG PKGV LTH NLLHQIRSL + + GD LS+LP WH YER+
Sbjct: 202 GSNQVATILYTSGTTGQPKGVPLTHANLLHQIRSLACVAYPQPGDPVLSVLPIWHAYERS 261
Query: 117 CGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 176
Y+ S YT ++ LK DL R QP M +VP ++E++ +G + + T +R+ +
Sbjct: 262 ASYYFLSCACTQTYTTIKQLKKDLPRVQPIAMATVPRLWESVQAGFEDVVKTFPPSRQRL 321
Query: 177 ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLV 236
RA + S A R L +P V A + + WPLH LA L+
Sbjct: 322 LRAALSNSSAQRQALRRANNLML-----EP---VCWAGRFQAAGVACLRWPLHALASALL 373
Query: 237 YKKIQSAIGISKAG--VSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNV 294
+ K++ + + +SGGG++ HID F+EA+G+++ VGYGLTE+SPVI+ RRP N+
Sbjct: 374 WPKVRRQLSGGQLAYPISGGGAIAPHIDAFFEAVGIELLVGYGLTETSPVISCRRPWHNI 433
Query: 295 LGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWL 354
GS G P+ TE ++VD E+ L +G V VRG QVM GY+ P AT + LD +GW
Sbjct: 434 RGSSGLPLPGTEFRVVDPESGMSLGCRERGRVLVRGPQVMGGYWGKPDATAKVLDAEGWF 493
Query: 355 NTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQI 414
+TGD+G + G + L GRAKDTIVLS+GEN+EP LEE + S LI Q+
Sbjct: 494 DTGDLGMLL----------ADGSVALTGRAKDTIVLSSGENIEPGPLEEVLVASPLIEQV 543
Query: 415 VVIGQDQRRPGAIIVPDKEEVLMAAKR--LSIVHADASELSKEKTISLLYGE-----LRK 467
+++GQD+R+ A+IVP + ++ A + LS+ + + + + LL E ++
Sbjct: 544 MLVGQDERQLAALIVPRADVIVDWAGQQGLSLANDLGGKPGDQALLRLLMKEGNRLLKQR 603
Query: 468 WTSKCSFQIGPIHVVDEPFTVN 489
++ ++ + +VD PFT++
Sbjct: 604 VGARGDERLAGVALVD-PFTID 624
>gi|33239851|ref|NP_874793.1| long-chain-fatty-acid--CoA ligase [Prochlorococcus marinus subsp.
marinus str. CCMP1375]
gi|33237377|gb|AAP99445.1| Long-chain acyl-CoA synthetase [Prochlorococcus marinus subsp.
marinus str. CCMP1375]
Length = 675
Score = 294 bits (753), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 164/390 (42%), Positives = 230/390 (58%), Gaps = 20/390 (5%)
Query: 57 GSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERA 116
+ IAT +YTSGTTG PKGV LTH NLLHQ+RSL I G LS+LP WH YER+
Sbjct: 224 ANSSIATILYTSGTTGKPKGVPLTHDNLLHQMRSLACIASPPPGTPLLSVLPIWHSYERS 283
Query: 117 CGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 176
Y+ FS YT +++ K DLQ +P M +VP ++E + +G + + +R++V
Sbjct: 284 AEYYFFSCACSQHYTTIKHFKQDLQTVRPVVMATVPRLWEAVKTGFDEALKKMPRSRQMV 343
Query: 177 ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLV 236
+A + S + A R L K + +A + WP+H LA KL+
Sbjct: 344 LKAALNNSRLFKAALRKSRNLLLLEINKT-NRAIAFSE-------VVFRWPIHALASKLL 395
Query: 237 YKKI--QSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNV 294
+ K+ Q + G + ++GGG++ H+D F+EA+GV++ VGYGLTE+SPV++ RR N+
Sbjct: 396 WPKVLQQLSGGRLRFPINGGGAIAPHVDTFFEALGVELLVGYGLTETSPVLSCRRTWRNI 455
Query: 295 LGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWL 354
GS G P+ TE +IVD L +G V VRG QVM GY + P T + LD+ GW
Sbjct: 456 RGSSGLPLPETEFRIVDPLNGGPLKFSQQGRVLVRGPQVMNGYLRKPEETSKVLDQKGWF 515
Query: 355 NTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQI 414
+TGD+G + G +VL GRAKDTIVLS GENVEP LEE L S LI QI
Sbjct: 516 DTGDLGMLL----------ADGSIVLTGRAKDTIVLSNGENVEPGPLEEFLLGSPLIEQI 565
Query: 415 VVIGQDQRRPGAIIVPDKEEVLMAAKRLSI 444
++IGQD+R+ GA+IVPD +++L A + ++
Sbjct: 566 IMIGQDERQLGALIVPDIDQILKWAHQRNL 595
>gi|124023832|ref|YP_001018139.1| long-chain-fatty-acid--CoA ligase [Prochlorococcus marinus str. MIT
9303]
gi|123964118|gb|ABM78874.1| putative long-chain-fatty-acid--CoA ligase [Prochlorococcus marinus
str. MIT 9303]
Length = 621
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 169/417 (40%), Positives = 248/417 (59%), Gaps = 24/417 (5%)
Query: 62 ATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFI 121
AT +YTSGTTG PKGV L+H NLLHQ+R L + G+ LS+LP WH YER+ Y+
Sbjct: 174 ATILYTSGTTGQPKGVPLSHANLLHQMRCLACVAFPSPGEPVLSVLPIWHAYERSAEYYF 233
Query: 122 FSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALI 181
FS YT ++ LK DL R +P M +VP ++E + +G + + R+ L+
Sbjct: 234 FSCACTQSYTTIKQLKRDLPRVRPIVMATVPRLWEAIQAGFDEAVKGMPTGRQ----RLL 289
Query: 182 RISFAYTAFKRIYEGFCLTRNQK-QPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKI 240
R++ A + +R + + +RN +P V L A + + WPLH LA L++ K+
Sbjct: 290 RMALANSGSQR--KAWRRSRNLLLEP---VPLTTRTLALLEATLRWPLHGLAGALLWPKV 344
Query: 241 QSAI--GISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSV 298
+ + G + ++GGG++ H+D F+EA+G+++ VGYGLTE+SPV++ RRP N+ GS
Sbjct: 345 LNQLCGGRLRFPINGGGAIAPHVDAFFEAVGLELLVGYGLTETSPVVSCRRPWRNIRGSS 404
Query: 299 GHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGD 358
G P+ TE +IVD E+ L +G V VRG QVM GY + P AT + LD GW +TGD
Sbjct: 405 GPPLPDTEFRIVDPESGAALMFRQRGRVLVRGPQVMAGYLRKPEATAKVLDGQGWFDTGD 464
Query: 359 IGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIG 418
+G + P G LVL GRAKDTIVLS+GEN+EP LE A + S L+ Q++++G
Sbjct: 465 LGMLLPD----------GSLVLTGRAKDTIVLSSGENIEPGPLEAALVASPLLEQVMLVG 514
Query: 419 QDQRRPGAIIVPDKEEVLMAAKR--LSIVHADASELSKEKTISLLYGELRKWTSKCS 473
QD+R+ A++VP +EE+L A+ LS+ + E LL GEL + ++ S
Sbjct: 515 QDERQLAALVVPREEEMLAWAEDQGLSMQTGLSGSPGDEALRRLLRGELNRLLAQRS 571
>gi|378974784|ref|YP_005223392.1| long-chain-fatty-acid--CoA ligase [Treponema pallidum subsp.
pallidum DAL-1]
gi|384421695|ref|YP_005631054.1| long-chain-fatty-acid--CoA ligase [Treponema pallidum subsp.
pallidum str. Chicago]
gi|291059561|gb|ADD72296.1| long-chain-fatty-acid--CoA ligase [Treponema pallidum subsp.
pallidum str. Chicago]
gi|374680182|gb|AEZ60472.1| long-chain-fatty-acid--CoA ligase [Treponema pallidum subsp.
pallidum DAL-1]
Length = 668
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 179/443 (40%), Positives = 243/443 (54%), Gaps = 37/443 (8%)
Query: 25 FSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNL 84
F+Y +I+ G + F + R + D+AT ++TSGTTG PKGV+L+H+N
Sbjct: 188 FTYQDILAHGTQ----FRVHHPGRIEDEIGRTTRADVATIIFTSGTTGTPKGVVLSHENF 243
Query: 85 LHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN--LKDDLQR 142
L Q+ + + GD LS+LP WHV+ER Y + S + Y+ + DL +
Sbjct: 244 LCQLIDISRRLTVCPGDIALSVLPVWHVFERISEYVVLSHAGGVAYSKPVGSVMLADLAK 303
Query: 143 YQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGF--CLT 200
PH++ SVP ++E ++ GI K + + + AY F R G T
Sbjct: 304 LNPHFLPSVPRIWEAIHDGIFKNVRKKGGVAAALFHFFLAAGKAYAYFYRSVFGLRTHTT 363
Query: 201 RNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPM 259
R + + L A + WL +L PLH L LV++K++ G S K +SGGG+LP
Sbjct: 364 RRAQFCAPLFACVPWL-------LLVPLHFLGNVLVFRKVRKKFGTSFKTAISGGGALPP 416
Query: 260 HIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLP 319
++D F AIGV+V GYGLTE++PVIA R V GSVG P + E+KIVD +T LP
Sbjct: 417 NVDEFLYAIGVRVLEGYGLTETAPVIAMRSERRPVFGSVGTPCAYNEVKIVD-DTGAQLP 475
Query: 320 AGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRC-GGVL 378
G KGIV VRG +MQGY+KNP T Q LD DGW NTGDIG+ RC GG +
Sbjct: 476 VGYKGIVLVRGKNIMQGYYKNPELTAQVLDADGWFNTGDIGY-----------RCVGGQI 524
Query: 379 VLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMA 438
VL GR KDT+VL GENVEP+ LE + S I + VV+GQD+R A+IVPD+ E+ +
Sbjct: 525 VLRGRKKDTVVLRGGENVEPVPLEMSMQESRFIARAVVVGQDERYLAALIVPDEAELRL- 583
Query: 439 AKRLSIVHADASELSKEKTISLL 461
A+A EL E LL
Sbjct: 584 -------WAEAQELRTECMEELL 599
>gi|378972655|ref|YP_005221259.1| long-chain-fatty-acid--CoA ligase [Treponema pallidum subsp.
pertenue str. SamoaD]
gi|378973722|ref|YP_005222328.1| long-chain-fatty-acid--CoA ligase [Treponema pallidum subsp.
pertenue str. Gauthier]
gi|378981631|ref|YP_005229936.1| long-chain-fatty-acid--CoA ligase [Treponema pallidum subsp.
pertenue str. CDC2]
gi|374676978|gb|AEZ57271.1| long-chain-fatty-acid--CoA ligase [Treponema pallidum subsp.
pertenue str. SamoaD]
gi|374678048|gb|AEZ58340.1| long-chain-fatty-acid--CoA ligase [Treponema pallidum subsp.
pertenue str. CDC2]
gi|374679117|gb|AEZ59408.1| long-chain-fatty-acid--CoA ligase [Treponema pallidum subsp.
pertenue str. Gauthier]
Length = 668
Score = 292 bits (747), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 179/443 (40%), Positives = 243/443 (54%), Gaps = 37/443 (8%)
Query: 25 FSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNL 84
F+Y +I+ G + F + R + D+AT ++TSGTTG PKGV+L+H+N
Sbjct: 188 FTYQDILAHGTQ----FRVHHPGRIEDEIGRTTRADVATIIFTSGTTGTPKGVVLSHENF 243
Query: 85 LHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN--LKDDLQR 142
L Q+ + + GD LS+LP WHV+ER Y + S + Y+ + DL +
Sbjct: 244 LCQLIDISRRLTVCPGDIALSVLPVWHVFERISEYVVLSHAGGVAYSKPVGSVMLADLAK 303
Query: 143 YQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGF--CLT 200
PH++ SVP ++E ++ GI K + + + AY F R G T
Sbjct: 304 LNPHFLPSVPRIWEAIHDGIFKNVRKKGGVAAALFHFFLAAGKAYAYFYRSVFGLRTHTT 363
Query: 201 RNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPM 259
R + + L A + WL +L PLH L LV++K++ G S K +SGGG+LP
Sbjct: 364 RRAQFCAPLFACVPWL-------LLVPLHFLGNVLVFRKVRKKFGTSFKTAISGGGALPP 416
Query: 260 HIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLP 319
++D F AIGV+V GYGLTE++PVIA R V GSVG P + E+KIVD +T LP
Sbjct: 417 NVDEFLYAIGVRVLEGYGLTETAPVIAMRSERRPVFGSVGTPCAYNEVKIVD-DTGAQLP 475
Query: 320 AGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRC-GGVL 378
G KGIV VRG +MQGY+KNP T Q LD DGW NTGDIG+ RC GG +
Sbjct: 476 VGYKGIVLVRGKNIMQGYYKNPELTAQVLDADGWFNTGDIGY-----------RCVGGQI 524
Query: 379 VLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMA 438
VL GR KDT+VL GENVEP+ LE + S I + VV+GQD+R A+IVPD+ E+ +
Sbjct: 525 VLRGRKKDTVVLRGGENVEPVPLEMSMQESRFIARAVVVGQDERYLAALIVPDEAELRL- 583
Query: 439 AKRLSIVHADASELSKEKTISLL 461
A+A EL E LL
Sbjct: 584 -------WAEAQELRTECMEELL 599
>gi|338706124|ref|YP_004672892.1| long-chain-fatty-acid--CoA ligase [Treponema paraluiscuniculi
Cuniculi A]
gi|335344185|gb|AEH40101.1| long-chain-fatty-acid--CoA ligase [Treponema paraluiscuniculi
Cuniculi A]
Length = 668
Score = 292 bits (747), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 179/443 (40%), Positives = 243/443 (54%), Gaps = 37/443 (8%)
Query: 25 FSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNL 84
F+Y +I+ G + F + R + D+AT ++TSGTTG PKGV+L+H+N
Sbjct: 188 FTYQDILAHGTQ----FRVHHPGRIEDEIGRTTRADVATIIFTSGTTGTPKGVVLSHENF 243
Query: 85 LHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN--LKDDLQR 142
L Q+ + + GD LS+LP WHV+ER Y + S + Y+ + DL +
Sbjct: 244 LCQLIDISHRLTVCPGDIALSVLPVWHVFERISEYVVLSHAGGVAYSKPVGSVMLADLAK 303
Query: 143 YQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGF--CLT 200
PH++ SVP ++E ++ GI K + + + AY F R G T
Sbjct: 304 LNPHFLPSVPRIWEAIHDGIFKNVRKKGGVAAALFHFFLAAGKAYAYFYRSVFGLRTHTT 363
Query: 201 RNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPM 259
R + + L A + WL +L PLH L LV++K++ G S K +SGGG+LP
Sbjct: 364 RRAQFCAPLFACVPWL-------LLVPLHFLGNVLVFRKVRKEFGTSFKTAISGGGALPP 416
Query: 260 HIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLP 319
++D F AIGV+V GYGLTE++PVIA R V GSVG P + E+KIVD +T LP
Sbjct: 417 NVDEFLYAIGVRVLEGYGLTETAPVIAMRSERRPVFGSVGTPCAYNEVKIVD-DTGAQLP 475
Query: 320 AGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRC-GGVL 378
G KGIV VRG +MQGY+KNP T Q LD DGW NTGDIG+ RC GG +
Sbjct: 476 VGYKGIVLVRGKNIMQGYYKNPELTAQVLDADGWFNTGDIGY-----------RCVGGQI 524
Query: 379 VLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMA 438
VL GR KDT+VL GENVEP+ LE + S I + VV+GQD+R A+IVPD+ E+ +
Sbjct: 525 VLRGRKKDTVVLRGGENVEPVPLEMSMQESRFIARAVVVGQDERYLAALIVPDEAELRL- 583
Query: 439 AKRLSIVHADASELSKEKTISLL 461
A+A EL E LL
Sbjct: 584 -------WAEAQELRTECMEELL 599
>gi|15639139|ref|NP_218585.1| long-chain-fatty-acid--CoA ligase [Treponema pallidum subsp.
pallidum str. Nichols]
gi|189025379|ref|YP_001933151.1| long-chain-fatty-acid--CoA ligase [Treponema pallidum subsp.
pallidum SS14]
gi|408502048|ref|YP_006869492.1| long-chain-fatty-acid--CoA ligase [Treponema pallidum subsp.
pallidum str. Mexico A]
gi|3322408|gb|AAC65132.1| long-chain-fatty-acid--CoA ligase [Treponema pallidum subsp.
pallidum str. Nichols]
gi|189017954|gb|ACD70572.1| long-chain-fatty-acid--CoA ligase [Treponema pallidum subsp.
pallidum SS14]
gi|408475411|gb|AFU66176.1| long-chain-fatty-acid--CoA ligase [Treponema pallidum subsp.
pallidum str. Mexico A]
Length = 656
Score = 292 bits (747), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 179/443 (40%), Positives = 243/443 (54%), Gaps = 37/443 (8%)
Query: 25 FSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNL 84
F+Y +I+ G + F + R + D+AT ++TSGTTG PKGV+L+H+N
Sbjct: 176 FTYQDILAHGTQ----FRVHHPGRIEDEIGRTTRADVATIIFTSGTTGTPKGVVLSHENF 231
Query: 85 LHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN--LKDDLQR 142
L Q+ + + GD LS+LP WHV+ER Y + S + Y+ + DL +
Sbjct: 232 LCQLIDISRRLTVCPGDIALSVLPVWHVFERISEYVVLSHAGGVAYSKPVGSVMLADLAK 291
Query: 143 YQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGF--CLT 200
PH++ SVP ++E ++ GI K + + + AY F R G T
Sbjct: 292 LNPHFLPSVPRIWEAIHDGIFKNVRKKGGVAAALFHFFLAAGKAYAYFYRSVFGLRTHTT 351
Query: 201 RNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPM 259
R + + L A + WL +L PLH L LV++K++ G S K +SGGG+LP
Sbjct: 352 RRAQFCAPLFACVPWL-------LLVPLHFLGNVLVFRKVRKKFGTSFKTAISGGGALPP 404
Query: 260 HIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLP 319
++D F AIGV+V GYGLTE++PVIA R V GSVG P + E+KIVD +T LP
Sbjct: 405 NVDEFLYAIGVRVLEGYGLTETAPVIAMRSERRPVFGSVGTPCAYNEVKIVD-DTGAQLP 463
Query: 320 AGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRC-GGVL 378
G KGIV VRG +MQGY+KNP T Q LD DGW NTGDIG+ RC GG +
Sbjct: 464 VGYKGIVLVRGKNIMQGYYKNPELTAQVLDADGWFNTGDIGY-----------RCVGGQI 512
Query: 379 VLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMA 438
VL GR KDT+VL GENVEP+ LE + S I + VV+GQD+R A+IVPD+ E+ +
Sbjct: 513 VLRGRKKDTVVLRGGENVEPVPLEMSMQESRFIARAVVVGQDERYLAALIVPDEAELRL- 571
Query: 439 AKRLSIVHADASELSKEKTISLL 461
A+A EL E LL
Sbjct: 572 -------WAEAQELRTECMEELL 587
>gi|124025167|ref|YP_001014283.1| long-chain-fatty-acid--CoA ligase [Prochlorococcus marinus str.
NATL1A]
gi|123960235|gb|ABM75018.1| putative long-chain-fatty-acid--CoA ligase [Prochlorococcus marinus
str. NATL1A]
Length = 657
Score = 291 bits (744), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 163/378 (43%), Positives = 229/378 (60%), Gaps = 22/378 (5%)
Query: 61 IATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF 120
IAT +YTSGTTG PKGV LTH NLLHQIRSL + G LS+LP WH YER+ Y+
Sbjct: 210 IATILYTSGTTGKPKGVPLTHSNLLHQIRSLACVANPSPGAPVLSVLPIWHSYERSAEYY 269
Query: 121 IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARAL 180
FS G YT++R+LK+DL R +P M +VP ++E++ G + + R+ + ++
Sbjct: 270 FFSCGCTQTYTSIRHLKEDLPRVKPIVMATVPRLWESIKLGFEDAVDKMPRLRKTLIKSA 329
Query: 181 IRISFAYT-AFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKK 239
I S AY A +++Y F + L++ I+ L + +P+H ++ ++ K
Sbjct: 330 ISNSKAYKLARRKLY--FLTIESVSSFEQLISCIEIL-------LRYPIHRISSIYLWPK 380
Query: 240 IQSAI--GISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 297
I + I G + +SGGG++ HID F+EA+GV++ VGYGLTE+SPV+ RRP N+ G
Sbjct: 381 ILTKICGGKLRFPISGGGAIAPHIDSFFEALGVELLVGYGLTETSPVLTCRRPWRNIRGG 440
Query: 298 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 357
G P+ TEIKIVD ET ++ KG+V RG Q+M GY S +K+ LD GW NTG
Sbjct: 441 AGQPLPETEIKIVDPETFQIKKLRQKGLVLARGPQIMSGYLGKRSESKKVLDATGWFNTG 500
Query: 358 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 417
D+G + G L+L GRAKDTIVLS+GEN+EP LEE + S LI Q +++
Sbjct: 501 DLGMLL----------SDGSLILTGRAKDTIVLSSGENIEPGPLEECLIASPLIEQALLL 550
Query: 418 GQDQRRPGAIIVPDKEEV 435
GQDQ+ A+IVP + V
Sbjct: 551 GQDQKYLAALIVPRIDHV 568
>gi|123965699|ref|YP_001010780.1| long-chain-fatty-acid--CoA ligase [Prochlorococcus marinus str. MIT
9515]
gi|123200065|gb|ABM71673.1| putative long-chain-fatty-acid--CoA ligase [Prochlorococcus marinus
str. MIT 9515]
Length = 641
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 169/413 (40%), Positives = 234/413 (56%), Gaps = 39/413 (9%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 118
+DIA+ +YTSGTTG PKGV LTH N LHQI +L I E G LS+LP WH YER+
Sbjct: 198 NDIASILYTSGTTGKPKGVPLTHANFLHQIINLAYIADPETGTSVLSVLPIWHSYERSAE 257
Query: 119 YFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 178
YF FS G YT + LKDD+++ +P M +VP ++E ++ G + + ++ +
Sbjct: 258 YFFFSCGCTQFYTNPKFLKDDIKKVKPVVMATVPRLWEAIHDGFFLALKKMNPKKQKTIK 317
Query: 179 ALIRISFAYTAFKRIYEGF-CLTRNQKQPSYLVALI-----DWLWARIICAILWP---LH 229
LI+ S + FKR + NQ + LI + +I LWP
Sbjct: 318 FLIKNS---SIFKRNLRKIRNIEINQVSSLAKICLIISVLGRFFLHKISSTFLWPSILKQ 374
Query: 230 LLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARR 289
L EKL K ++GGG+LP H+DLF+E++G+ V VGYGLTE+SPV+ RR
Sbjct: 375 LCGEKL------------KFPINGGGALPEHVDLFFESLGIDVLVGYGLTETSPVLTCRR 422
Query: 290 PTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALD 349
NV GS G P+ TEIKIV+ E +++L G + V+G QVM+GY N SATK L
Sbjct: 423 RELNVRGSSGQPLAFTEIKIVNEEKDKILEFREVGKILVKGPQVMKGYLNNDSATKDVLS 482
Query: 350 EDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSS 409
+DGW +TGD+G++ P+ G LV+ GRAKDTIVLS+GEN+EP LE L S
Sbjct: 483 KDGWFDTGDLGFLIPN----------GSLVITGRAKDTIVLSSGENIEPNPLETQILSSE 532
Query: 410 LIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLY 462
I Q+ ++GQD++ A++VP+ E V + D S L+ K I L +
Sbjct: 533 FINQVQLVGQDKKFLTALVVPNIELV-----KNKFFANDLSTLNSNKNIGLFF 580
>gi|72383573|ref|YP_292928.1| long-chain-fatty-acid--CoA ligase [Prochlorococcus marinus str.
NATL2A]
gi|72003423|gb|AAZ59225.1| long-chain acyl-CoA synthetase [Prochlorococcus marinus str.
NATL2A]
Length = 657
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 163/378 (43%), Positives = 228/378 (60%), Gaps = 22/378 (5%)
Query: 61 IATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF 120
IAT +YTSGTTG PKGV LTH NLLHQIRSL + G LS+LP WH YER+ Y+
Sbjct: 210 IATILYTSGTTGKPKGVPLTHSNLLHQIRSLACVANPSPGAPVLSVLPIWHSYERSAEYY 269
Query: 121 IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARAL 180
FS G YT++R+LK+DL R +P M +VP ++E++ G + + R+ + ++
Sbjct: 270 FFSCGCTQTYTSIRHLKEDLPRVKPIVMATVPRLWESIKLGFEDAVDKMPRLRKTLIKSA 329
Query: 181 IRISFAYT-AFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKK 239
I S AY A +++Y F + + + I+ L + +P+H ++ ++ K
Sbjct: 330 ISNSKAYKLARRKLY--FLTIESVSSFEQISSFIEIL-------LRYPMHRISSIYLWPK 380
Query: 240 IQSAI--GISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 297
I + I G + +SGGG++ HID F+EA+GV++ VGYGLTE+SPV+ RRP N+ G
Sbjct: 381 ILTKICGGRLRFPISGGGAIAPHIDSFFEALGVELLVGYGLTETSPVLTCRRPWRNIRGG 440
Query: 298 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 357
G P+ TEIKIVD ET ++ KG+V RG Q+M GY S +K+ LD GW NTG
Sbjct: 441 AGQPLPETEIKIVDPETFQIKKLRQKGLVLARGPQIMSGYLGKRSESKKVLDATGWFNTG 500
Query: 358 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 417
D+G + G L+L GRAKDTIVLS+GEN+EP LEE + SSLI Q ++
Sbjct: 501 DLGMLL----------SDGSLILTGRAKDTIVLSSGENIEPGPLEECLIASSLIEQAFLL 550
Query: 418 GQDQRRPGAIIVPDKEEV 435
GQDQ+ A+IVP + V
Sbjct: 551 GQDQKYLAALIVPRIDHV 568
>gi|392401663|ref|YP_006438275.1| AMP-dependent synthetase and ligase [Turneriella parva DSM 21527]
gi|390609617|gb|AFM10769.1| AMP-dependent synthetase and ligase [Turneriella parva DSM 21527]
Length = 625
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 159/408 (38%), Positives = 249/408 (61%), Gaps = 21/408 (5%)
Query: 54 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 113
+ + SDD+ T +YTSGTTG PKGVML+H N+++ I + + D LS+LP WH++
Sbjct: 173 DAVKSDDLFTIIYTSGTTGLPKGVMLSHGNMVYNINEVPKAIGLRPDDSMLSLLPVWHIF 232
Query: 114 ERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 173
ERA Y ++GI L YT VR+++DD + +P +M S P ++E+LY GI ++I S AR
Sbjct: 233 ERAVDYGAIAKGIPLYYTNVRDVRDDFAKVKPTFMPSAPRLWESLYQGIMQRIEKSEPAR 292
Query: 174 RVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAI-LWPLHLLA 232
+V+ RIS Y K+ + +QP + + + A L+ LA
Sbjct: 293 KVMFETAYRISKEY---KKAVDYLAGNELMQQPESDADRLSRTASSLFTAASLYIPARLA 349
Query: 233 EKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPT 291
+++V+ KI+ A+G + +SGGG+LP H+D F+ IG+ V GYG+TE +P+I+ R
Sbjct: 350 DRVVFSKIREAMGGRFRGSISGGGALPAHVDEFFNVIGIPVYEGYGMTECAPIISVRTEG 409
Query: 292 CNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDED 351
+ GSVG N TE+ I++ + E + G KG++ VRG QVM+GY+KNP AT++ +++D
Sbjct: 410 KIIQGSVGFVPNGTEVAILN-DKGERVRTGEKGVIHVRGPQVMKGYYKNPEATEKTINKD 468
Query: 352 GWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLI 411
GWLNTGDIG+ + +++ L + GRAK+TIVL GENVEP+ +E L + I
Sbjct: 469 GWLNTGDIGFFSFNNT----------LSIRGRAKETIVLLGGENVEPVPIENKLLEDAQI 518
Query: 412 RQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHAD-ASELSKEKTI 458
QI+V+GQD++ A++ P+ E+V K ++ + AD S+L+ K +
Sbjct: 519 NQIIVVGQDKKTLTALVWPNLEKV----KEVAGISADPKSDLNANKEL 562
>gi|298711624|emb|CBJ32681.1| long chain acyl-CoA synthetase [Ectocarpus siliculosus]
Length = 725
Score = 288 bits (737), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 177/440 (40%), Positives = 250/440 (56%), Gaps = 41/440 (9%)
Query: 2 RFIILLW-----GKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETI 56
RF+++L+ GK+ + +I E I V ++ E +D G + + K
Sbjct: 195 RFLMVLFPGGKNGKELQESLNIPESIKVVTFSECLDKG----GVLDAAPVVERSMK---- 246
Query: 57 GSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI------RSLYDIVPAENGDKFLSMLPPW 110
AT VYTSGTTG PKG +LTH NLLHQ+ RS + GD F+S+LP W
Sbjct: 247 -----ATLVYTSGTTGKPKGAVLTHANLLHQVSQNSFDRSEGSPMNPWVGDVFVSILPCW 301
Query: 111 HVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSS 170
H++ER YF +RG+ + Y+ VRN K DL++++PH++I VP + ET++ G+Q Q+ S
Sbjct: 302 HIFERTAEYFTLTRGVTMGYSNVRNFKSDLKKFKPHFLIVVPRLLETIWKGVQTQLEAKS 361
Query: 171 AARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHL 230
+ A AL R+S R + G + R+ K AL + ++ + PL L
Sbjct: 362 KGAQKAAGALTRVSSLRMKAARRFSGTVI-RDSKPKGPEKAL-----SAVLMGVTLPLKL 415
Query: 231 LAEKLVYKKIQSAIGISKAGVSGG-GSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARR 289
AEKLV+ KI+ +G V G SLP ++ F+E GV+V VGYGLTE+SPVIA R
Sbjct: 416 AAEKLVWGKIRDGVGGRVKVVVSGGSSLPSFLEDFFEMAGVRVLVGYGLTETSPVIANRV 475
Query: 290 PTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALD 349
T N G+ G P+ +E+KI D ET + + G G + +RG QVM GY NP AT +D
Sbjct: 476 ATENTKGTTGKPVPGSEVKIADQETGQQVAVGQTGKILIRGPQVMSGYQNNPEATAAVID 535
Query: 350 EDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEA-ALRS 408
+DG+ +TGD+G P G L++ GRAKDTIVLS GENVEP LE+A +
Sbjct: 536 KDGYFDTGDLGRFNP---------ITGDLIVTGRAKDTIVLSNGENVEPQPLEDAISGAC 586
Query: 409 SLIRQIVVIGQDQRRPGAII 428
SLI Q+++ GQD+R GAI+
Sbjct: 587 SLIDQVMLFGQDERFLGAIV 606
>gi|33862488|ref|NP_894048.1| long-chain-fatty-acid--CoA ligase [Prochlorococcus marinus str. MIT
9313]
gi|33640601|emb|CAE20390.1| putative long-chain-fatty-acid--CoA ligase [Prochlorococcus marinus
str. MIT 9313]
Length = 664
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 165/416 (39%), Positives = 242/416 (58%), Gaps = 22/416 (5%)
Query: 62 ATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFI 121
AT +YTSGTTG PKGV L+H NLLHQ+R L + G LS+LP WH YER+ Y+
Sbjct: 217 ATILYTSGTTGQPKGVPLSHANLLHQMRCLACVAFPSPGAPVLSVLPIWHAYERSAEYYF 276
Query: 122 FSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALI 181
FS YT ++ LK DL R +P M +VP ++E + +G + + R+ L+
Sbjct: 277 FSCACTQSYTTIKQLKRDLPRVRPIVMATVPRLWEAIQAGFDEAVKGMPTGRQ----RLL 332
Query: 182 RISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQ 241
R++ A + +R R++ + L A + + WPLH LA L++ K+
Sbjct: 333 RMALANSGSQRK----AWRRSRNLLLEPLPLTTRTLALLEATLRWPLHGLAGALLWPKVL 388
Query: 242 SAI--GISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVG 299
+ + G + ++GGG++ H+D F+EA+G+++ VGYGLTE+SPV++ RRP N+ GS G
Sbjct: 389 NQLCGGRLRFPINGGGAIAPHVDAFFEAVGLELLVGYGLTETSPVVSCRRPWRNIRGSSG 448
Query: 300 HPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDI 359
P+ TE +IVD E+ L +G V VRG QVM GY + P AT + LD GW +TGD+
Sbjct: 449 PPLPETEFRIVDPESGVDLMFRQRGRVLVRGPQVMAGYLRKPEATAKVLDGQGWFDTGDL 508
Query: 360 GWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQ 419
G + P G LVL GRAKDTIVLS+GEN+EP LE A + S L+ Q++++GQ
Sbjct: 509 GMLLPD----------GSLVLTGRAKDTIVLSSGENIEPGPLEAALVASPLLEQVMLVGQ 558
Query: 420 DQRRPGAIIVPDKEEVLMAAKRLSIVHADASELS--KEKTISLLYGELRKWTSKCS 473
D+R+ A++VP +EE+L A+ ++ S E LL GEL + ++ S
Sbjct: 559 DERQLAALVVPREEEMLAWAEDQGLLMQTGLSGSPGDEALRRLLRGELNRLLAQRS 614
>gi|332298944|ref|YP_004440866.1| o-succinylbenzoate--CoA ligase [Treponema brennaborense DSM 12168]
gi|332182047|gb|AEE17735.1| Long-chain-fatty-acid--CoA ligase., o-succinylbenzoate--CoA ligase
[Treponema brennaborense DSM 12168]
Length = 635
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 174/439 (39%), Positives = 250/439 (56%), Gaps = 29/439 (6%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 118
DD+A ++TSGTTG PKGVMLTH N L Q+ L + + GDK L +LP WH ++R C
Sbjct: 185 DDLACIIFTSGTTGEPKGVMLTHGNFLTQLDELQERIYLYPGDKALCVLPVWHAFQRLCE 244
Query: 119 YFIFSRGIELMYTAVRN--LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 176
Y I + L Y+ L D Q+ P + +VP V+E++Y G+ + + + A +
Sbjct: 245 YVILCQAAALCYSKPVGSILLADFQKLNPQLLPAVPRVFESVYEGVFRLMRKTGGAVYAL 304
Query: 177 ARALIRISFAYTAF-KRIYEGFCLTRNQKQ-PSYLVALIDWLWARIICAILWPLHLLAEK 234
R + ++ +R++ N PS++V ++ WL +L+P+ LL
Sbjct: 305 FRFFTAAAILHSKIDRRLFRKTARFGNDFLIPSWIVLVLPWL-------LLYPIKLLGGV 357
Query: 235 LVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCN 293
LV+KKI++ +G S + GVSGGG+LP ID F+ AIGV + GYGLTE++PV++ R
Sbjct: 358 LVFKKIRAKLGNSFRGGVSGGGALPPQIDEFFWAIGVNIVEGYGLTETAPVVSVRPLRKP 417
Query: 294 VLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGW 353
V G+VG I E++IVDA+ N VLPAG KG+V+VRG VM+GY++ T + + GW
Sbjct: 418 VFGTVGSAIRGVEVRIVDAQGN-VLPAGKKGVVQVRGGTVMKGYYRRDDLTANVMRDGGW 476
Query: 354 LNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQ 413
+TGDIG + G +VL GR KDTIVL GENVEPL +E S I Q
Sbjct: 477 FDTGDIGMLT----------VDGEIVLRGRMKDTIVLRGGENVEPLPIEMRLNESRYIAQ 526
Query: 414 IVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHAD-ASELSKEKTISLLYGELR-KWTSK 471
VVIGQDQR GA+IVP +E+V A I + D S L +++ I L E++ +K
Sbjct: 527 SVVIGQDQRYLGALIVPSQEDVTAFADENCIRYTDYQSLLKQDEIIKLFDSEIQGAINAK 586
Query: 472 CSF----QIGPIHVVDEPF 486
F +IG ++ +PF
Sbjct: 587 NGFKLFEKIGRFALLAKPF 605
>gi|254525931|ref|ZP_05137983.1| putative AMP-binding enzyme [Prochlorococcus marinus str. MIT 9202]
gi|221537355|gb|EEE39808.1| putative AMP-binding enzyme [Prochlorococcus marinus str. MIT 9202]
Length = 647
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 166/407 (40%), Positives = 234/407 (57%), Gaps = 27/407 (6%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 118
DD+AT +YTSGTTG PKGV L+H N LHQI +L I E G LS+LP WH YER+
Sbjct: 198 DDVATILYTSGTTGKPKGVPLSHANFLHQIINLAYIADPEPGTSVLSVLPIWHSYERSAE 257
Query: 119 YFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 178
YF FS G YT + LKDD+ + +P M +VP ++E ++ G + + ++ + +
Sbjct: 258 YFFFSCGCSQYYTIPKFLKDDITQIKPVVMATVPRLWEAIHDGFFQALKKMPFKKQKLIK 317
Query: 179 ALIRISFAYTAFKRIYEGF-CLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVY 237
LI S + FKR L NQ + L+ +IC +PLH L+ ++
Sbjct: 318 FLISNS---SVFKRSLRKIRNLDINQITFESKIPLL----GSVICR--YPLHKLSNIFLW 368
Query: 238 KKIQSAIGISKAG--VSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVL 295
I + K ++GGG+LP H+DLF+E++G+ V VGYGLTE+SPV+ RR NV
Sbjct: 369 PNILRQLCGEKLKFPINGGGALPEHVDLFFESLGIDVLVGYGLTETSPVLTCRRRELNVR 428
Query: 296 GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLN 355
GS G P+ TEIKIV+ + ++L G + VRG QVM+GY N ATK L +DGW +
Sbjct: 429 GSSGQPLAFTEIKIVNDDKKKILKFREVGKILVRGPQVMKGYLNNEIATKDVLSKDGWFD 488
Query: 356 TGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIV 415
TGD+G++ P+ G L + GRAKDTIVLS+GEN+EP LE L S I QI
Sbjct: 489 TGDLGFLIPN----------GSLFITGRAKDTIVLSSGENIEPNPLETEILSSEFINQIQ 538
Query: 416 VIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLY 462
++GQD++ A++VP+ E V + + D S+L+ K I +
Sbjct: 539 LVGQDKKCLTALVVPNVELV-----KSKFLEEDLSKLNLNKNIGTFF 580
>gi|123967990|ref|YP_001008848.1| long-chain-fatty-acid--CoA ligase [Prochlorococcus marinus str.
AS9601]
gi|123198100|gb|ABM69741.1| putative long-chain-fatty-acid--CoA ligase [Prochlorococcus marinus
str. AS9601]
Length = 647
Score = 285 bits (729), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 164/410 (40%), Positives = 229/410 (55%), Gaps = 33/410 (8%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 118
DD+AT +YTSGTTG PKGV LTH N LHQI +L I E G LS+LP WH YER+
Sbjct: 198 DDVATILYTSGTTGKPKGVPLTHANFLHQIINLAYIADPEPGTCVLSVLPIWHSYERSAE 257
Query: 119 YFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 178
YF FS G YT + LKDD+ + +P M +VP ++E ++ G + + + ++ + +
Sbjct: 258 YFFFSCGCSQYYTIPKFLKDDITQIKPVVMATVPRLWEAIHDGFFQALKKMPSKKQKLIK 317
Query: 179 ALIRISFAYTAFKRIYEGFCLTR---NQKQPSYLVALIDWLWARIICAILWP---LHLLA 232
LI S + R F + + K P + + ++ LWP L
Sbjct: 318 FLISNSSVFKRSLRKIRNFDINKITFKSKIPLLGSVISRYPLHKLSTIFLWPNILRQLCG 377
Query: 233 EKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTC 292
EKL K ++GGG+LP H+DLF+E++GV V VGYGLTE+SPV+ RR
Sbjct: 378 EKL------------KFPINGGGALPEHVDLFFESLGVDVLVGYGLTETSPVLTCRRREL 425
Query: 293 NVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDG 352
NV GS G P+ TEIKIV+ + +L G + VRG QVM+GY N AT + L +DG
Sbjct: 426 NVRGSSGQPLAFTEIKIVNDDKKNILKFREVGKILVRGPQVMKGYLNNEIATNEVLSKDG 485
Query: 353 WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIR 412
W +TGD+G++ P+ G L + GRAKDTIVLS+GEN+EP LE L S I
Sbjct: 486 WFDTGDLGFLIPN----------GSLFITGRAKDTIVLSSGENIEPNPLETEILSSEFIN 535
Query: 413 QIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLY 462
QI ++GQD++ A++VP+ E V + + D S+L+ K I +
Sbjct: 536 QIQLVGQDKKCLTALVVPNVELV-----KSKFLEEDISKLNLNKNIGTFF 580
>gi|126695760|ref|YP_001090646.1| long-chain-fatty-acid--CoA ligase [Prochlorococcus marinus str. MIT
9301]
gi|126542803|gb|ABO17045.1| putative long-chain-fatty-acid--CoA ligase [Prochlorococcus marinus
str. MIT 9301]
Length = 647
Score = 285 bits (728), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 165/407 (40%), Positives = 235/407 (57%), Gaps = 27/407 (6%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 118
DD+AT +YTSGTTG PKGV LTH N LHQI +L I E G LS+LP WH YER+
Sbjct: 198 DDVATILYTSGTTGKPKGVPLTHANFLHQIINLAYIADPEPGTSVLSVLPIWHSYERSAE 257
Query: 119 YFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 178
YF FS G YT + LKDD+ + +P M +VP ++E ++ G + + + ++ + +
Sbjct: 258 YFFFSCGCTQYYTIPKFLKDDITQIKPVVMATVPRLWEAIHDGFFQALKKMPSKKQKLIK 317
Query: 179 ALIRISFAYTAFKRIYEGF-CLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVY 237
LI S + FKR + NQ + L+ + +R +PLH L+ ++
Sbjct: 318 FLISNS---SVFKRSLRKIRNIDINQITFKSKIPLLGSVISR------YPLHKLSTIFLW 368
Query: 238 KKIQSAIGISKAG--VSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVL 295
I + K ++GGG+LP H+DLF+E++GV V VGYGLTE+SPV+ RR NV
Sbjct: 369 PNILRQLCGEKLKFPINGGGALPEHVDLFFESLGVDVLVGYGLTETSPVLTCRRRELNVR 428
Query: 296 GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLN 355
GS G P++ TEIKIV+ + ++L G + VRG QVM+GY N AT L +DGW +
Sbjct: 429 GSSGQPLSFTEIKIVNDDKKKILKFREVGKILVRGPQVMRGYLNNEIATNDVLSKDGWFD 488
Query: 356 TGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIV 415
TGD+G++ P+ G L + GRAKDTIVLS+GEN+EP LE L S I QI
Sbjct: 489 TGDLGFLIPN----------GSLFITGRAKDTIVLSSGENIEPNPLETEILSSEFINQIQ 538
Query: 416 VIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLY 462
++GQD++ A++VP+ E V + + D S+L+ K I +
Sbjct: 539 LVGQDKKCLTALVVPNVELV-----KSKFLEEDLSKLNLNKKIGTFF 580
>gi|157412815|ref|YP_001483681.1| putative long-chain-fatty-acid--CoA ligase [Prochlorococcus marinus
str. MIT 9215]
gi|157387390|gb|ABV50095.1| putative long-chain-fatty-acid--CoA ligase [Prochlorococcus marinus
str. MIT 9215]
Length = 647
Score = 285 bits (728), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 165/406 (40%), Positives = 233/406 (57%), Gaps = 25/406 (6%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 118
DD+AT +YTSGTTG PKGV L+H N LHQI +L I E G LS+LP WH YER+
Sbjct: 198 DDVATILYTSGTTGKPKGVPLSHANFLHQIINLAYIADPEPGTSVLSVLPIWHSYERSAE 257
Query: 119 YFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 178
YF FS G YT + LKDD+ + +P M +VP ++E ++ G + + ++ + +
Sbjct: 258 YFFFSCGCSQYYTIPKFLKDDITQIKPVVMATVPRLWEAIHDGFFQVLKKMPFKKQKLIK 317
Query: 179 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 238
LI S + + R L NQ + L+ +IC +PLH L+ ++
Sbjct: 318 FLIGNSSVFKSSLRKIRN--LDINQITFKSKIPLL----GSVICR--YPLHKLSNIFLWP 369
Query: 239 KIQSAIGISKAG--VSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLG 296
I + K ++GGG+LP H+DLF+E++GV V VGYGLTE+SPV+ RR NV G
Sbjct: 370 NILRQLCGEKLKFPINGGGALPEHVDLFFESLGVDVLVGYGLTETSPVLTCRRRELNVRG 429
Query: 297 SVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNT 356
S G P+ TEIKIV+ + ++L G + VRG QVM+GY N ATK L +DGW +T
Sbjct: 430 SSGQPLAFTEIKIVNDDKKKILKFREVGKILVRGPQVMKGYLNNEIATKDVLSKDGWFDT 489
Query: 357 GDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVV 416
GD+G++ P+ G L + GRAKDTIVLS+GEN+EP LE L S I QI +
Sbjct: 490 GDLGFLIPN----------GSLFITGRAKDTIVLSSGENIEPNPLETEILSSEFINQIQL 539
Query: 417 IGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLY 462
+GQD++ A++VP+ E V + + D S+L+ K I +
Sbjct: 540 VGQDKKCLTALVVPNIELV-----KSKFLEEDLSKLNLNKNIGTFF 580
>gi|384252453|gb|EIE25929.1| long-chain-fatty-acid CoA ligase [Coccomyxa subellipsoidea C-169]
Length = 476
Score = 284 bits (726), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 150/356 (42%), Positives = 214/356 (60%), Gaps = 42/356 (11%)
Query: 76 GVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN 135
GVMLTH NL +Q+ +L + + G++ LS+LPPWH+YER+CGY++FSR +YT +R
Sbjct: 95 GVMLTHGNLKYQMDNLSFFLKPKPGERSLSLLPPWHIYERSCGYYLFSRACTQVYTNIRK 154
Query: 136 LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYE 195
++DL Y PH+ + VP+V +TLY +Q+QI SS +R +AR I AY +RI +
Sbjct: 155 FREDLSAYPPHHFVCVPMVLDTLYGRVQQQIKKSSLVKRTIARLFFAIGAAYIRARRILD 214
Query: 196 GFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGG 255
G LV+ KI++A+GI +SGGG
Sbjct: 215 GV-------------------------------------LVFGKIRAALGIMSTVISGGG 237
Query: 256 SLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTC--NVLGSVGHPINHTEIKIVDAE 313
SL H+D FYE + + V G+GLTE+SPV++ RR NV GSVG PI T +++VD E
Sbjct: 238 SLARHLDDFYETLALPVLNGWGLTETSPVLSCRRDATRENVRGSVGLPIPGTVVRVVDPE 297
Query: 314 TNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQA-LDEDGWLNTGDIGWIAPHHSRGRSR 372
T +P G +G++ +G VM+GYF + +AT +A + DGW +TGD+GW AP G +
Sbjct: 298 TLRPVPEGQQGLLLAKGPGVMKGYFNDEAATAKAFVAGDGWFDTGDLGWRAPTGVAGSN- 356
Query: 373 RCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAII 428
G +VL GRAKDTIVLS+GENVEP +E+A S I+ +V++GQD R GA++
Sbjct: 357 -MAGHIVLTGRAKDTIVLSSGENVEPAPIEDACAVSPFIQHLVLVGQDHRMLGALV 411
>gi|78778783|ref|YP_396895.1| long-chain-fatty-acid--CoA ligase [Prochlorococcus marinus str. MIT
9312]
gi|78712282|gb|ABB49459.1| putative long-chain-fatty-acid--CoA ligase [Prochlorococcus marinus
str. MIT 9312]
Length = 647
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 175/445 (39%), Positives = 247/445 (55%), Gaps = 46/445 (10%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 118
DD+AT +YTSGTTG PKGV LTH N LHQI +L I G LS+LP WH YER+
Sbjct: 198 DDVATILYTSGTTGKPKGVPLTHANFLHQIINLAHIADPGPGTSVLSVLPIWHSYERSAE 257
Query: 119 YFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 178
YF FS G YT + LKDD+ + +P M +VP ++E ++ G + + + ++ + +
Sbjct: 258 YFFFSCGCTQYYTIPKFLKDDITQIKPVVMATVPRLWEAIHDGFFQALKKMPSKKQKLIK 317
Query: 179 ALIRISFAYT-AFKRI--YEGFCLTRNQKQPSYLVALIDWLWARIICAILWP---LHLLA 232
LI S + + ++I + F T K P L + ++ LWP L
Sbjct: 318 FLISNSSVFKISLRKIRNLDIFQTTFIAKIPLLFSVLGRYPLHKLSSVFLWPNILRQLCG 377
Query: 233 EKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTC 292
EKL K ++GGG+LP H+DLF+E++G+ V VGYGLTE+SPV+ RR
Sbjct: 378 EKL------------KFPINGGGALPEHVDLFFESLGIDVLVGYGLTETSPVLTCRRREL 425
Query: 293 NVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDG 352
NV GS G P+ TEIKIV+ + ++L G + V+G QVM+GY N ATK L +DG
Sbjct: 426 NVRGSSGQPLAFTEIKIVNEDKKKILKFREVGKILVKGPQVMKGYLNNDLATKDVLSKDG 485
Query: 353 WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIR 412
W +TGD+G++ P+ G L + GRAKDTIVLS+GEN+EP LE L S I
Sbjct: 486 WFDTGDLGFLIPN----------GSLFITGRAKDTIVLSSGENIEPNPLETEILSSEFIN 535
Query: 413 QIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTI---------SLLYG 463
Q+ ++GQD++ A++VP+ E V + + D S+L+ K I +LL G
Sbjct: 536 QVQLVGQDKKCLTALVVPNVELV-----KNKFLEEDLSKLNLNKNIGIFFKSQINNLLKG 590
Query: 464 ELRKWTSKCSFQIGPIHVVDEPFTV 488
L T + QI + VD PFT+
Sbjct: 591 RLGARTEE---QILDCYFVD-PFTL 611
>gi|91070346|gb|ABE11263.1| putative long-chain-fatty-acid--CoA ligase [uncultured
Prochlorococcus marinus clone HF10-88F10]
Length = 647
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 165/407 (40%), Positives = 234/407 (57%), Gaps = 27/407 (6%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 118
DD+AT +YTSGTTG PKGV LTH N LHQI +L I E G LS+LP WH YER+
Sbjct: 198 DDVATILYTSGTTGKPKGVPLTHANFLHQIINLAYIADPEPGTSVLSVLPIWHSYERSAE 257
Query: 119 YFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 178
YF FS G YT + LKDD+ + +P M +VP ++E ++ G + + ++ + +
Sbjct: 258 YFFFSCGCSQYYTIPKFLKDDITQIKPVVMATVPRLWEAIHDGFFQALKKMPFKKQKLIK 317
Query: 179 ALIRISFAYTAFKRIYEGF-CLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVY 237
LI S + FKR + NQ + L+ + +R +PLH L+ ++
Sbjct: 318 FLISNS---SVFKRSLRKIRNIDINQITFKSKIPLLGSVISR------YPLHKLSTIFLW 368
Query: 238 KKIQSAIGISKAG--VSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVL 295
I + K ++GGG+LP H+DLF+E++GV V VGYGLTE+SPV+ RR NV
Sbjct: 369 PNILRQLCGEKLKFPINGGGALPEHVDLFFESLGVDVLVGYGLTETSPVLTCRRRELNVR 428
Query: 296 GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLN 355
GS G P+ TEIKIV+ + ++L G + V+G QVM+GY N ATK L +DGW +
Sbjct: 429 GSSGQPLAFTEIKIVNDDKKKILKFREVGKILVKGPQVMKGYLNNELATKDVLSKDGWFD 488
Query: 356 TGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIV 415
TGD+G++ P+ G L + GRAKDTIVLS+GEN+EP LE L S I QI
Sbjct: 489 TGDLGFLIPN----------GSLFITGRAKDTIVLSSGENIEPNPLETEILSSEFINQIQ 538
Query: 416 VIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLY 462
++GQD++ A++VP+ E V + + D S+L+ K I +
Sbjct: 539 LVGQDKKCLTALVVPNLELV-----KNKFLEEDLSKLNLNKNIGTFF 580
>gi|224003691|ref|XP_002291517.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220973293|gb|EED91624.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 792
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 178/495 (35%), Positives = 258/495 (52%), Gaps = 64/495 (12%)
Query: 43 DSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI------RSLYDIVP 96
DS + + I D++T VYTSGTTG PKGVMLTH NLLHQ YD
Sbjct: 288 DSTTPLRDKELPAIDRSDLSTIVYTSGTTGRPKGVMLTHGNLLHQTGHRMAPTRPYDETE 347
Query: 97 AENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYE 156
G+ LS+LP WH+ ER F+ RG ++Y+ +R K+DL +YQP +M+ VP V E
Sbjct: 348 PLPGELMLSLLPVWHITERTFELFMLVRGCHVVYSGIRWFKNDLAKYQPQWMVLVPRVLE 407
Query: 157 TLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWL 216
+ G+Q + + AA + + + S ++I +G + P +D +
Sbjct: 408 KVAFGVQDKFASGGAAVKALVKLFTATSTLKNKHQKIRKGLVVGDEPPTP------MDGI 461
Query: 217 WARIICAILWPLHLLAEKLVYKKIQSAI-GISKAGVSGGGSLPMHIDLFYEAIGVKVQVG 275
+ II L PL+ L KLV+KK+Q G + +SGG +L ++ FYE G+ + VG
Sbjct: 462 ISTIIVKALAPLNFLGNKLVWKKVQDGFGGRQRVIISGGSALAGSLETFYENCGIDILVG 521
Query: 276 YGLTESSPVIAARRPTCNVL--GSVGHPINHTEIKIVDAETN------EVLPAGSKGIVK 327
YGLTE SP+++ RR N++ G VG TE+++VD E N + LP G G+V
Sbjct: 522 YGLTECSPLLSYRRTDSNLVTAGCVGFAATDTELRVVDPEANPENGERKALPDGLAGVVL 581
Query: 328 VRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDT 387
RG QVM+GY+KNP AT +A+D+ GW +TGD+G I P G L+L GRAKDT
Sbjct: 582 GRGPQVMKGYYKNPEATGKAVDKWGWFDTGDLGRINP---------ATGDLILTGRAKDT 632
Query: 388 IVLSTGENVEPLELEEAAL-RSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMA-------A 439
IVLS GEN+EP +E+A + S L+ Q+++ GQD R AI V E++ A A
Sbjct: 633 IVLSNGENIEPQPIEDAIMSESDLVEQVMLSGQDGRSLIAITVLSPNELVNAGLLEESRA 692
Query: 440 KRL----------------------SIVHADASELSKEKTISLLYGELRKWTSKCSF--- 474
K++ + A A +K + E+++ TS SF
Sbjct: 693 KQILKDHDIVNDPKCSEEECAEACERLAKASAEIRAKGAVTKQVASEVKRATSSGSFRKW 752
Query: 475 -QIGPIHVVDEPFTV 488
Q+ ++V EPF +
Sbjct: 753 EQVSDVYVTLEPFAM 767
>gi|194477166|ref|YP_002049345.1| putative long-chain-fatty-acid--CoA ligase [Paulinella
chromatophora]
gi|171192173|gb|ACB43135.1| putative long-chain-fatty-acid--CoA ligase [Paulinella
chromatophora]
Length = 645
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 165/467 (35%), Positives = 263/467 (56%), Gaps = 38/467 (8%)
Query: 27 YDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLH 86
++E I G +++ S ND+R+ +AT +YTSGTT PKGV LTH NLLH
Sbjct: 182 WEEFISYGAKTQALPSFYNDSRR-----------LATLIYTSGTTSKPKGVALTHSNLLH 230
Query: 87 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 146
QIR+L +V + + LS+LP WH YER+ YF+ S G YT ++ L+ DLQ +P
Sbjct: 231 QIRTLRVVVEPHSNENTLSILPIWHAYERSIEYFLLSCGCCQNYTNLKKLRKDLQHIKPI 290
Query: 147 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 206
Y++SVP +++ L G + + + + R +++S + R + + +
Sbjct: 291 YLVSVPRLWQALMEGFEDNLSNLPSHVNYLIRVFLKLSRYNRSRWRFAQNLSIQPVCNKA 350
Query: 207 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKI-QSAIG-ISKAGVSGGGSLPMHIDLF 264
+L A I I WP H+LA ++ K+ Q +G + + GGG+L +ID F
Sbjct: 351 RFL--------AGIEVLITWPSHVLASITIWPKVRQQLVGDLLTTAICGGGALGAYIDSF 402
Query: 265 YEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKG 324
+EAIG+++ VGYGLTE+SPV+ RR + N+ S G P+ T+++I+D+ + L G KG
Sbjct: 403 FEAIGIELLVGYGLTETSPVLTCRRRSANIRESAGRPLPLTDLRIIDSSSARPLGWGEKG 462
Query: 325 IVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRA 384
+ RG QVM+GY++ + L+ + W +TGD+G++ P G L+L GRA
Sbjct: 463 RILARGPQVMKGYYRESDSNMTILNGESWFDTGDLGYLLPD----------GSLILTGRA 512
Query: 385 KDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI 444
K+TIVL+ GEN+EP+ LE S L+ QI++IGQDQR+ A+IVP E + + +I
Sbjct: 513 KETIVLNNGENIEPVVLEVTLSASPLVEQIILIGQDQRQLAALIVPCFEAIGNLMQVRNI 572
Query: 445 VHADASELS---KEKTISLLYGELRKWTSKCSFQIGPIHVVDEPFTV 488
++ D + KE+ +L G + S+ + ++ I +V EPF++
Sbjct: 573 LNNDLPLIMNAIKEELNRILAGRI---GSRLNERLAGIALV-EPFSI 615
>gi|307718544|ref|YP_003874076.1| hypothetical protein STHERM_c08540 [Spirochaeta thermophila DSM
6192]
gi|306532269|gb|ADN01803.1| hypothetical protein STHERM_c08540 [Spirochaeta thermophila DSM
6192]
Length = 636
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 156/408 (38%), Positives = 238/408 (58%), Gaps = 26/408 (6%)
Query: 58 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERAC 117
DD+AT +YTSGTTG PKGVML H++ + QI L + E GD FLS+LP WH +ERA
Sbjct: 185 GDDLATIIYTSGTTGEPKGVMLPHRSFIFQIDKLKKPLNVEVGDIFLSILPIWHSFERAV 244
Query: 118 GYFIFSRGIELMYTAV--RNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 175
Y + RG + Y+ + L +D+ + +P ++ +VP V+E + + + + + A RV
Sbjct: 245 DYILMERGGAVAYSKPVGKILLEDMTKVRPQWLAAVPRVFEGIRNAVYRNVNKGPAVSRV 304
Query: 176 VARALIRISFAYTAFKRIYEGFC---LTRNQKQPSYLVALIDWLWARIICAILWPLHLLA 232
+ + + Y F ++ G L RN+ ++D + A + A+L P L
Sbjct: 305 LFHFFVGVGELYAYFSNMFRGLLPDFLPRNR--------ILDKVVAFVPLALLAPFRGLG 356
Query: 233 EKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPT 291
E LV++K+++ +G K GVSGGG+LP H+D F++A+G++V GYGLTE+ PV+A R
Sbjct: 357 EVLVFRKLKAKLGGRFKTGVSGGGALPPHVDTFFQAVGIQVLEGYGLTETGPVLAVRDQK 416
Query: 292 CNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDED 351
++G+VG ++ E K++D N LP G KG++ V+ QVM GY+K P AT + L +D
Sbjct: 417 APMVGTVGPLLDEVEYKVLDEHGNP-LPPGHKGVLWVKSPQVMLGYYKRPEATAEVL-KD 474
Query: 352 GWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLI 411
GWLNTGD+ + GR + GRAKDTIVL GENVEP +EE S I
Sbjct: 475 GWLNTGDL----VRFTHGRE------FAIVGRAKDTIVLRGGENVEPGPIEEKLKESEFI 524
Query: 412 RQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTIS 459
VV+GQDQ+ GA+IVP++E + A+ + + + +L ++ +
Sbjct: 525 ENAVVVGQDQKFLGALIVPNRERIEEYAREKGLSYMEYEDLVEQAEVQ 572
>gi|225619495|ref|YP_002720752.1| Long-chain acyl-CoA synthetase [Brachyspira hyodysenteriae WA1]
gi|225214314|gb|ACN83048.1| Long-chain acyl-CoA synthetases (AMP-forming) [Brachyspira
hyodysenteriae WA1]
Length = 625
Score = 279 bits (713), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 174/477 (36%), Positives = 259/477 (54%), Gaps = 40/477 (8%)
Query: 24 VFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKN 83
++S+++ ++LG ES D A K K + ++ IAT +YTSGTTG PKGV+LTH N
Sbjct: 145 IYSFEKFLELGEESLNG--DEEFAIK--KASKLTNESIATIIYTSGTTGKPKGVILTHGN 200
Query: 84 LLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRY 143
+LH +R L DI+ G+K L++LP WH+YER Y G T R LK+D
Sbjct: 201 ILHNVRVLPDIIKLHPGEKLLTILPIWHIYERTISYVTAVTGCFTAITNKRYLKNDFTEE 260
Query: 144 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCL---- 199
+P ISVP ++ +Y+ + K I SA R +A+ I+ S Y R
Sbjct: 261 KPDIFISVPAIWVNIYNTVMKNIDRKSAFTRNLAKFFIKRSIKYIRSLRFQNDLIYLLGD 320
Query: 200 -TRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSL 257
+N K+ Y + + D ++ H +A K+VY KI+ G + +SGGG+L
Sbjct: 321 ENKNDKKAEYSIGMFDPIY-----------HKMATKMVYSKIRELTGGKMRLTISGGGAL 369
Query: 258 PMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEV 317
PM+I+ F EA+G+ + VG+G+TE+SPV+ R P N G+ G PI +I++ D E N +
Sbjct: 370 PMYIEDFIEAVGINLIVGWGITETSPVVTLRSPYKNYRGTCGTPIPEVKIEVRDKEGN-I 428
Query: 318 LPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGV 377
G G+ ++G + + Y+K+P TKQA DG+ N+GD+G G
Sbjct: 429 CKDGVMGVCYIKGPNIFKEYYKDPELTKQA-KIDGFFNSGDLGTYTQQ----------GE 477
Query: 378 LVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLM 437
+VL GRAK+TIVL TGENVEP +E AL S I QI+++GQD+ GAIIV +KE +
Sbjct: 478 IVLTGRAKETIVLLTGENVEPQPIENKALESPYISQIMLVGQDKASTGAIIVINKENIKE 537
Query: 438 AAKRLSIVHADASELSKEKTI-SLLYGELRKWTS-KCSFQ----IGPIHVVDEPFTV 488
+ I H D + L+ K + L+ EL + + F+ I + + DE FT+
Sbjct: 538 HFDKQKI-HYDENTLASSKDVYKLMREELDNLINYRNGFRPYEAIAKMIITDEEFTI 593
>gi|33860959|ref|NP_892520.1| long-chain-fatty-acid--CoA ligase [Prochlorococcus marinus subsp.
pastoris str. CCMP1986]
gi|33639691|emb|CAE18861.1| putative long-chain-fatty-acid--CoA ligase [Prochlorococcus marinus
subsp. pastoris str. CCMP1986]
Length = 641
Score = 279 bits (713), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 171/448 (38%), Positives = 246/448 (54%), Gaps = 46/448 (10%)
Query: 24 VFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKN 83
+ ++ E I G E+ N++ + Y ++ +DIA+ +YTSGTTG PKGV LTH N
Sbjct: 170 LINWPEFIKAGEENLL----KNNSFEKYNHQI---NDIASILYTSGTTGKPKGVPLTHAN 222
Query: 84 LLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRY 143
LHQI +L +I E G LS+LP WH YER+ YF FS G YT + LKDD+++
Sbjct: 223 FLHQIINLANIADPEPGTSVLSVLPIWHSYERSAEYFFFSCGCTQFYTNPKFLKDDIKQV 282
Query: 144 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGF-CLTRN 202
+P M +VP ++E ++ G + + + + FKR L N
Sbjct: 283 KPVVMATVPRLWEAIHDGF---FLALKKMPPKKQKIIKILIKNSSIFKRNLRKIRNLEIN 339
Query: 203 Q----KQPSYLVALIDWLWA-RIICAILWP---LHLLAEKLVYKKIQSAIGISKAGVSGG 254
Q + S +++I + +I LWP L EKL K ++GG
Sbjct: 340 QVSSLAKISLTISVIGRFFIHKISSTFLWPSILKQLCGEKL------------KFPINGG 387
Query: 255 GSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAET 314
G+LP H+DLF+E++G+ V VGYGLTE+SPV+ RR NV GS G P+ TEIKI++ E
Sbjct: 388 GALPEHVDLFFESLGIDVLVGYGLTETSPVLTCRRRELNVRGSSGQPLAFTEIKIMNEEK 447
Query: 315 NEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRC 374
+++L G + V+G QVM+GY N SATK L +DGW +TGD+G++ P+
Sbjct: 448 DKILKFKEIGKILVKGPQVMKGYLNNISATKDVLSKDGWFDTGDLGFLIPN--------- 498
Query: 375 GGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEE 434
G LV+ GRAKDTIVLS+GEN+EP LE L S I Q+ ++GQD++ A++ P+ E
Sbjct: 499 -GSLVITGRAKDTIVLSSGENIEPNPLETEILSSEFINQVQLVGQDKKCLTALVAPNIEL 557
Query: 435 VLMAAKRLSIVHADASELSKEKTISLLY 462
V D S+L+ K I L +
Sbjct: 558 V-----ENKFFENDISKLNSNKKIGLFF 580
>gi|387192078|gb|AFJ68636.1| long-chain acyl-CoA synthetase [Nannochloropsis gaditana CCMP526]
Length = 671
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 185/541 (34%), Positives = 289/541 (53%), Gaps = 74/541 (13%)
Query: 2 RFIILLW-GKKSSVAPDIVEEIP----VFSYDEIIDLGRESRKAFSDSNDARKHYKYETI 56
RFI++L+ G++S + +P V ++DE + S + + +
Sbjct: 138 RFILVLFPGERSGQEIRELANLPPPTQVLTFDEAL------------SASLARPLTFRPV 185
Query: 57 GSD--DIATYVYTSGTTGNPKGVMLTHKNLLHQIR--SLYDIV---PAEN---GDKFLSM 106
D +AT VYTSGTT PKGV+L H NLLHQ+ S D PA N GD +S+
Sbjct: 186 PKDVRSVATLVYTSGTTNKPKGVVLRHSNLLHQVNYNSFTDSPSKEPAYNPVLGDVLVSV 245
Query: 107 LPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQI 166
LP WH++ER Y++FS+GI ++Y+ V+N K DL ++QP ++++VP + ET+Y G+ ++
Sbjct: 246 LPCWHIFERTAEYWMFSKGIHVVYSNVKNFKADLAKHQPQFIVAVPRLLETIYRGVLQKF 305
Query: 167 FTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILW 226
T A++ + R+ A+ R+ G L P I+ L A ++ +L
Sbjct: 306 ATEKGAKKKIIEFFTRVGSAWVKAWRVARGLVLRSRAPNP------IERLLALVLALVLS 359
Query: 227 PLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVI 285
PL + +KLV+ K+++ +G K V+GG S+P+ ++ F+E + V VGYG+TE+SPVI
Sbjct: 360 PLAAVGDKLVWSKVRAGLGGRIKVLVAGGSSMPLVLEDFFELLRTPVIVGYGMTETSPVI 419
Query: 286 AARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATK 345
R N+ GSVG TE+KIVD E+ LP G G+V +RG Q+M GY N A+K
Sbjct: 420 TNRVAEKNLAGSVGRTARDTEVKIVDPESGARLPEGQPGLVLMRGPQMMAGYKSNAEASK 479
Query: 346 QALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAA 405
LD++G+L+TGD+G I P L++ GRAKDTIVLS GENVEP +E+
Sbjct: 480 AVLDQEGFLDTGDLGRIHPLTKH---------LIITGRAKDTIVLSNGENVEPQPIEDVV 530
Query: 406 L-RSSLIRQIVVIGQDQRRPGAIIVPDKE-----------------EVL--------MAA 439
S+L+ Q++ +GQD++ G ++VP+ E+L +A
Sbjct: 531 CANSALVDQVMCVGQDEKVLGMLVVPNVRALARAGLVDRGLAERVAELLGGQVLTNGIAG 590
Query: 440 KRLSIVHADASELSKEKTISLLYGELRKWTSKC---SFQIGPIHVVDEPFTV--NFLCLA 494
R + +AS K++ L ++ + K + ++G + VV EPF + FL
Sbjct: 591 SRAELEEVEASLREKKEVKKALLADIARAMGKSFRETERVGAVEVVLEPFNMANGFLTQT 650
Query: 495 L 495
L
Sbjct: 651 L 651
>gi|343127895|ref|YP_004777826.1| AMP-binding protein [Borrelia bissettii DN127]
gi|342222583|gb|AEL18761.1| AMP-binding enzyme family protein [Borrelia bissettii DN127]
Length = 645
Score = 278 bits (710), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 172/477 (36%), Positives = 274/477 (57%), Gaps = 28/477 (5%)
Query: 22 IPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTH 81
I VFSY ++++LG E +A + D + E S DIAT +YTSGTTG PKGVML H
Sbjct: 150 ITVFSYKKLLELGAEYLRANPKAFDM----EIEKGSSKDIATIIYTSGTTGMPKGVMLRH 205
Query: 82 KNLLHQIRSLYDIVPA-ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN--LKD 138
++ + Q+ LYD +P + G +S+LP WH +ERAC Y + +GI + Y+ L
Sbjct: 206 ESFIFQLDRLYDYLPTLKPGKIMISILPLWHSFERACEYIVALKGIAIAYSKPIGPVLLK 265
Query: 139 DLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFC 198
D P +ISVP ++E + GI K++ + S +++V ++I Y K + G
Sbjct: 266 DFLLLNPQMIISVPRIWEGIRIGIIKKV-SESFIKKLVFGGFLKIGIVYAKLKERFLG-- 322
Query: 199 LTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSL 257
L+ K+ S ++L L+ + +++P+ LL + LV+KKI++A+G + + GVSGGG+L
Sbjct: 323 LSPIYKKTSLFISLFSKLFIFVGIVLIFPIKLLGDILVFKKIKNALGQNFEFGVSGGGAL 382
Query: 258 PMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEV 317
++D F++A+G+KV GYGLTE+ P+++ RR V +VG + E K+V + N V
Sbjct: 383 VDYVDYFFKAVGIKVLEGYGLTETGPILSVRRLKGPVAKTVGPILPDVEYKVVGFDGN-V 441
Query: 318 LPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGV 377
LP G KG + VR Q+M GYFK+ + T + L EDGW NTGD+ + ++
Sbjct: 442 LPYGEKGELWVRSPQIMNGYFKDKAKTNEVLTEDGWFNTGDLVRLTINNE---------- 491
Query: 378 LVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLM 437
+ + GR+KDTIVL GEN+EP LE +S I I+++GQDQ+ GA+IVP+ + +
Sbjct: 492 ISIVGRSKDTIVLRGGENIEPEPLERVLGKSLFIENIMIVGQDQKFLGAVIVPNFDNLEK 551
Query: 438 AAKRLSIVHADASELSKEKTISLLYGELRKWT--SKCSF----QIGPIHVVDEPFTV 488
A + + S+L + ++ LY + T +K F +I ++ +PF++
Sbjct: 552 WANSSGVSFSSRSDLLANEDVNKLYSKHISDTINTKVGFKNFEKIAGFVLLQDPFSI 608
>gi|408794606|ref|ZP_11206211.1| AMP-binding enzyme [Leptospira meyeri serovar Hardjo str. Went 5]
gi|408461841|gb|EKJ85571.1| AMP-binding enzyme [Leptospira meyeri serovar Hardjo str. Went 5]
Length = 624
Score = 278 bits (710), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 164/447 (36%), Positives = 256/447 (57%), Gaps = 32/447 (7%)
Query: 26 SYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLL 85
S + +I+ G RK N + + + DD+ T +YTSGTTG PKGVMLTH+N++
Sbjct: 150 SMETLINEGETLRK-----NLPSLELRSKQVKPDDLFTIIYTSGTTGMPKGVMLTHQNMV 204
Query: 86 HQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQP 145
+ + + V ++ D+ LS+LP WH++ERA Y I + G + YT +R+L+DD Q+ +P
Sbjct: 205 YNVVKVPPRVGLKSSDRTLSILPVWHIFERAIDYAIIAEGASIAYTNIRDLRDDFQKIKP 264
Query: 146 HYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGF-CLTRNQK 204
+M S P ++E LY GI++++ + +R + FAY K+ +G L N+
Sbjct: 265 SFMASAPRLWENLYQGIKQKLEKAPENKRKL------FDFAYDICKKFKDGQDYLAGNKL 318
Query: 205 QPSYLVALIDWLWARIICAILWPLHLLA---EKLVYKKIQSAIGISKAG-VSGGGSLPMH 260
Q + + L LL+ + LV+ KI+ +G G +SGGG+LP H
Sbjct: 319 QTKEESPFERAKNTAVSLGYVLNLFLLSKVLDGLVFSKIRDVLGGHLTGTISGGGALPAH 378
Query: 261 IDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA 320
+D F+ IG+ V GYG+TE +P+I+ R V GSVG T +K+V+ + E +P
Sbjct: 379 VDEFFNVIGIPVYEGYGMTECAPIISVRSVGNVVQGSVGKWPEGTIVKVVN-DQGESVPK 437
Query: 321 GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVL 380
G GI+ ++G QVM+GY+KN AT +A+ +DGW+NTGD+G+I+ + + L +
Sbjct: 438 GKMGIIHIKGPQVMKGYYKNEEATSKAI-QDGWMNTGDLGFISFNDT----------LSV 486
Query: 381 EGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAK 440
GR KDTIVL GENVEP+ +E L ++LI Q++V+GQDQ+ A+I PDKE + K
Sbjct: 487 RGRVKDTIVLLGGENVEPVPIENLLLENALINQVIVVGQDQKSLTALIWPDKERM----K 542
Query: 441 RLSIVHADASELSKEKTISLLYGELRK 467
+ + +L++ K I L Y + K
Sbjct: 543 EAGLNPKEGEDLNQNKEIRLYYQNIVK 569
>gi|216264227|ref|ZP_03436219.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi 156a]
gi|215980700|gb|EEC21507.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi 156a]
Length = 645
Score = 277 bits (709), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 172/480 (35%), Positives = 275/480 (57%), Gaps = 28/480 (5%)
Query: 19 VEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVM 78
+ I VFSY ++++LG E +A S D + E S DIAT +YTSGTTG PKGVM
Sbjct: 147 IGNITVFSYKKLLELGTEYLRANPKSFDM----EIEKGSSKDIATIIYTSGTTGMPKGVM 202
Query: 79 LTHKNLLHQIRSLYDIVPA-ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN-- 135
L H++ + Q+ LYD +P + G +S+LP WH +ERAC Y + +GI + Y+
Sbjct: 203 LRHESFIFQLDRLYDYLPTLKPGKIMISILPLWHSFERACEYIVALKGIAIAYSKPIGPV 262
Query: 136 LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYE 195
L D P ++SVP ++E + GI K++ + S ++ V +++ Y K +
Sbjct: 263 LLKDFLLLNPQMIVSVPRIWEGIRIGIIKKV-SESFIKKFVFGGFLKVGIIYAKLKERFL 321
Query: 196 GFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGG 254
G L+ K+ ++L++L L+ I +++P+ LL + LV+KKI++A+G + + GVSGG
Sbjct: 322 G--LSPIYKKTNFLISLFSKLFLFIGIVLIFPIKLLGDILVFKKIKNALGQNFEFGVSGG 379
Query: 255 GSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAET 314
G+L ++D F++A+G+KV GYGLTE+ P+++ RR V +VG + E K+V +
Sbjct: 380 GALVDYVDYFFKAVGIKVLEGYGLTETGPILSVRRLKGPVAKTVGPILPDVEYKVVGID- 438
Query: 315 NEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRC 374
VLP G KG + VR Q+M GYFK+ + T + L EDGW NTGD+ + ++
Sbjct: 439 GRVLPYGEKGELWVRSPQIMSGYFKDKTKTSEVLTEDGWFNTGDLVRLTINNE------- 491
Query: 375 GGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEE 434
+ + GR+KDTIVL GEN+EP LE +S I I+++GQDQ+ GA+IVP+ +
Sbjct: 492 ---ISIVGRSKDTIVLRGGENIEPEPLERVLGKSLFIENIMIVGQDQKFLGAVIVPNFDN 548
Query: 435 VLMAAKRLSIVHADASELSKEKTISLLYGELRKWT--SKCSF----QIGPIHVVDEPFTV 488
+ A + + S+L + ++ LY + T +K F +I ++ +PFT+
Sbjct: 549 LEKWANSSGVSFSSRSDLLANEDVNKLYSKHISDTINTKLGFKNFEKIVGFVLLQDPFTI 608
>gi|218249826|ref|YP_002375101.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi ZS7]
gi|218165014|gb|ACK75075.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi ZS7]
Length = 645
Score = 277 bits (709), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 172/480 (35%), Positives = 275/480 (57%), Gaps = 28/480 (5%)
Query: 19 VEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVM 78
+ I VFSY ++++LG E +A S D + E S DIAT +YTSGTTG PKGVM
Sbjct: 147 IGNISVFSYKKLLELGTEYLRANPKSFDM----EIEKGSSKDIATIIYTSGTTGMPKGVM 202
Query: 79 LTHKNLLHQIRSLYDIVPA-ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN-- 135
L H++ + Q+ LYD +P + G +S+LP WH +ERAC Y + +GI + Y+
Sbjct: 203 LRHESFIFQLDRLYDYLPTLKPGKIMISILPLWHSFERACEYIVALKGIAIAYSKPIGPV 262
Query: 136 LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYE 195
L D P ++SVP ++E + GI K++ + S ++ V +++ Y K +
Sbjct: 263 LLKDFLLLNPQVIVSVPRIWEGIRIGIIKKV-SESFIKKFVFGGFLKVGIIYAKLKERFL 321
Query: 196 GFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGG 254
G L+ K+ ++L++L L+ I +++P+ LL + LV+KKI++A+G + + GVSGG
Sbjct: 322 G--LSPIYKKTNFLISLFSKLFLFIGIVLIFPIKLLGDILVFKKIKNALGQNFEFGVSGG 379
Query: 255 GSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAET 314
G+L ++D F++A+G+KV GYGLTE+ P+++ RR V +VG + E K+V +
Sbjct: 380 GALVDYVDYFFKAVGIKVLEGYGLTETGPILSVRRLKGPVAKTVGPILPDVEYKVVGID- 438
Query: 315 NEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRC 374
VLP G KG + VR Q+M GYFK+ + T + L EDGW NTGD+ + ++
Sbjct: 439 GRVLPYGEKGELWVRSPQIMSGYFKDKAKTSEVLTEDGWFNTGDLVRLTINNE------- 491
Query: 375 GGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEE 434
+ + GR+KDTIVL GEN+EP LE +S I I+++GQDQ+ GA+IVP+ +
Sbjct: 492 ---ISIVGRSKDTIVLRGGENIEPEPLERVLGKSLFIENIMIVGQDQKFLGAVIVPNFDN 548
Query: 435 VLMAAKRLSIVHADASELSKEKTISLLYGELRKWT--SKCSF----QIGPIHVVDEPFTV 488
+ A + + S+L + ++ LY + T +K F +I ++ +PFT+
Sbjct: 549 LEKWANSSGVSFSSRSDLLANEDVNKLYSKHISDTINTKLGFKNFEKIVGFVLLQDPFTI 608
>gi|15594938|ref|NP_212727.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi B31]
gi|195941726|ref|ZP_03087108.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi 80a]
gi|223888827|ref|ZP_03623418.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi 64b]
gi|225549652|ref|ZP_03770618.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi 118a]
gi|387826230|ref|YP_005805683.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi JD1]
gi|2688524|gb|AAC66957.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi B31]
gi|223885643|gb|EEF56742.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi 64b]
gi|225369929|gb|EEG99376.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi 118a]
gi|312147979|gb|ADQ30638.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi JD1]
Length = 645
Score = 277 bits (709), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 172/480 (35%), Positives = 275/480 (57%), Gaps = 28/480 (5%)
Query: 19 VEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVM 78
+ I VFSY ++++LG E +A S D + E S DIAT +YTSGTTG PKGVM
Sbjct: 147 IGNITVFSYKKLLELGTEYLRANPKSFDM----EIEKGSSKDIATIIYTSGTTGMPKGVM 202
Query: 79 LTHKNLLHQIRSLYDIVPA-ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN-- 135
L H++ + Q+ LYD +P + G +S+LP WH +ERAC Y + +GI + Y+
Sbjct: 203 LRHESFIFQLDRLYDYLPTLKPGKIMISILPLWHSFERACEYIVALKGIAIAYSKPIGPV 262
Query: 136 LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYE 195
L D P ++SVP ++E + GI K++ + S ++ V +++ Y K +
Sbjct: 263 LLKDFLLLNPQMIVSVPRIWEGIRIGIIKKV-SESFIKKFVFGGFLKVGIIYAKLKERFL 321
Query: 196 GFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGG 254
G L+ K+ ++L++L L+ I +++P+ LL + LV+KKI++A+G + + GVSGG
Sbjct: 322 G--LSPIYKKTNFLISLFSKLFLFIGIVLIFPIKLLGDILVFKKIKNALGQNFEFGVSGG 379
Query: 255 GSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAET 314
G+L ++D F++A+G+KV GYGLTE+ P+++ RR V +VG + E K+V +
Sbjct: 380 GALVDYVDYFFKAVGIKVLEGYGLTETGPILSVRRLKGPVAKTVGPILPDVEYKVVGID- 438
Query: 315 NEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRC 374
VLP G KG + VR Q+M GYFK+ + T + L EDGW NTGD+ + ++
Sbjct: 439 GRVLPYGEKGELWVRSPQIMSGYFKDKAKTSEVLTEDGWFNTGDLVRLTINNE------- 491
Query: 375 GGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEE 434
+ + GR+KDTIVL GEN+EP LE +S I I+++GQDQ+ GA+IVP+ +
Sbjct: 492 ---ISIVGRSKDTIVLRGGENIEPEPLERVLGKSLFIENIMIVGQDQKFLGAVIVPNFDN 548
Query: 435 VLMAAKRLSIVHADASELSKEKTISLLYGELRKWT--SKCSF----QIGPIHVVDEPFTV 488
+ A + + S+L + ++ LY + T +K F +I ++ +PFT+
Sbjct: 549 LEKWANSSGVSFSSRSDLLANEDVNKLYSKHISDTINTKLGFKNFEKIVGFVLLQDPFTI 608
>gi|221218169|ref|ZP_03589635.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi 72a]
gi|226321899|ref|ZP_03797425.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi Bol26]
gi|221192117|gb|EEE18338.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi 72a]
gi|226233088|gb|EEH31841.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi Bol26]
Length = 645
Score = 277 bits (709), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 172/480 (35%), Positives = 275/480 (57%), Gaps = 28/480 (5%)
Query: 19 VEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVM 78
+ I VFSY ++++LG E +A S D + E S DIAT +YTSGTTG PKGVM
Sbjct: 147 IGNISVFSYKKLLELGTEYLRANPKSFDM----EIEKGSSKDIATIIYTSGTTGMPKGVM 202
Query: 79 LTHKNLLHQIRSLYDIVPA-ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN-- 135
L H++ + Q+ LYD +P + G +S+LP WH +ERAC Y + +GI + Y+
Sbjct: 203 LRHESFIFQLDRLYDYLPTLKPGKIMISILPLWHSFERACEYIVALKGIAIAYSKPIGPV 262
Query: 136 LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYE 195
L D P ++SVP ++E + GI K++ + S ++ V +++ Y K +
Sbjct: 263 LLKDFLLLNPQMIVSVPRIWEGIRIGIIKKV-SESFIKKFVFGGFLKVGIIYAKLKERFL 321
Query: 196 GFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGG 254
G L+ K+ ++L++L L+ I +++P+ LL + LV+KKI++A+G + + GVSGG
Sbjct: 322 G--LSPIYKKTNFLISLFSKLFLFIGIVLIFPIKLLGDILVFKKIKNALGQNFEFGVSGG 379
Query: 255 GSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAET 314
G+L ++D F++A+G+KV GYGLTE+ P+++ RR V +VG + E K+V +
Sbjct: 380 GALVDYVDYFFKAVGIKVLEGYGLTETGPILSVRRLKGPVAKTVGPILPDVEYKVVGID- 438
Query: 315 NEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRC 374
VLP G KG + VR Q+M GYFK+ + T + L EDGW NTGD+ + ++
Sbjct: 439 GRVLPYGEKGELWVRSPQIMSGYFKDKAKTSEVLTEDGWFNTGDLVRLTINNE------- 491
Query: 375 GGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEE 434
+ + GR+KDTIVL GEN+EP LE +S I I+++GQDQ+ GA+IVP+ +
Sbjct: 492 ---ISIVGRSKDTIVLRGGENIEPEPLERVLGKSLFIENIMIVGQDQKFLGAVIVPNFDN 548
Query: 435 VLMAAKRLSIVHADASELSKEKTISLLYGELRKWT--SKCSF----QIGPIHVVDEPFTV 488
+ A + + S+L + ++ LY + T +K F +I ++ +PFT+
Sbjct: 549 LEKWANSSGVSFSSRSDLLANEDVNKLYSKHISDTINTKLGFKNFEKIVGFVLLQDPFTI 608
>gi|224532749|ref|ZP_03673366.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi WI91-23]
gi|224512367|gb|EEF82751.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi WI91-23]
Length = 645
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 172/480 (35%), Positives = 275/480 (57%), Gaps = 28/480 (5%)
Query: 19 VEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVM 78
+ I VFSY ++++LG E +A S D + E S DIAT +YTSGTTG PKGVM
Sbjct: 147 IGNITVFSYKKLLELGTEYLRANPKSFDI----EIEKGSSKDIATIIYTSGTTGMPKGVM 202
Query: 79 LTHKNLLHQIRSLYDIVPA-ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN-- 135
L H++ + Q+ LYD +P + G +S+LP WH +ERAC Y + +GI + Y+
Sbjct: 203 LRHESFIFQLDRLYDYLPTLKPGKIMISILPLWHSFERACEYIVALKGIAIAYSKPIGPV 262
Query: 136 LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYE 195
L D P ++SVP ++E + GI K++ + S ++ V +++ Y K +
Sbjct: 263 LLKDFLLLNPQMIVSVPRIWEGIRIGIIKKV-SESFIKKFVFGGFLKVGIIYAKLKERFL 321
Query: 196 GFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGG 254
G L+ K+ ++L++L L+ I +++P+ LL + LV+KKI++A+G + + GVSGG
Sbjct: 322 G--LSPIYKKTNFLISLFSKLFLFIGIVLIFPIKLLGDILVFKKIKNALGQNFEFGVSGG 379
Query: 255 GSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAET 314
G+L ++D F++A+G+KV GYGLTE+ P+++ RR V +VG + E K+V +
Sbjct: 380 GALVDYVDYFFKAVGIKVLEGYGLTETGPILSVRRLKGPVAKTVGPILPDVEYKVVGID- 438
Query: 315 NEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRC 374
VLP G KG + VR Q+M GYFK+ + T + L EDGW NTGD+ + ++
Sbjct: 439 GRVLPYGEKGELWVRSPQIMSGYFKDKAKTSEVLTEDGWFNTGDLVRLTINNE------- 491
Query: 375 GGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEE 434
+ + GR+KDTIVL GEN+EP LE +S I I+++GQDQ+ GA+IVP+ +
Sbjct: 492 ---ISIVGRSKDTIVLRGGENIEPEPLERVLGKSLFIENIMIVGQDQKFLGAVIVPNFDN 548
Query: 435 VLMAAKRLSIVHADASELSKEKTISLLYGELRKWT--SKCSF----QIGPIHVVDEPFTV 488
+ A + + S+L + ++ LY + T +K F +I ++ +PFT+
Sbjct: 549 LEKWANSSGVSFSSISDLLANEDVNKLYSKHISDTINTKLGFKNFEKIVGFVLLQDPFTI 608
>gi|386853996|ref|YP_006203281.1| Long-chain-fatty-acid CoA ligase [Borrelia garinii BgVir]
gi|365194030|gb|AEW68928.1| Long-chain-fatty-acid CoA ligase [Borrelia garinii BgVir]
Length = 645
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 160/414 (38%), Positives = 247/414 (59%), Gaps = 22/414 (5%)
Query: 22 IPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTH 81
I VFSY ++++LG E +A S D + E S DIAT +YTSGTTG PKGVML H
Sbjct: 150 ITVFSYKKLLELGAEHLRANPKSFDI----EIEKGSSKDIATIIYTSGTTGMPKGVMLRH 205
Query: 82 KNLLHQIRSLYDIVPA-ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN--LKD 138
++ + Q+ LYD +PA + G +S+LP WH +ERAC Y + +G+ + Y+ L
Sbjct: 206 ESFIFQLDRLYDYLPAIKPGKIMISILPLWHSFERACEYIVALKGVAIAYSKPIGPVLLK 265
Query: 139 DLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFC 198
D P +ISVP ++E + GI K++ + S +++V ++I Y + GF
Sbjct: 266 DFLLLNPQMIISVPRIWEGIRIGIIKKV-SESLIKKLVFGGFLKIGIIYAKLNEKFLGFS 324
Query: 199 LTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSL 257
K+P+ +++ L+ I +++P+ LL + LV+KKI++A+G + + GVSGGG+L
Sbjct: 325 PV--YKKPNLFISIFSKLFLFIGIILIFPIKLLGDILVFKKIKNALGQNFEFGVSGGGAL 382
Query: 258 PMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEV 317
++D F++A+G+KV GYGLTE+ PV++ RR V +VG + E K+V + +V
Sbjct: 383 VDYVDYFFKAVGIKVLEGYGLTETGPVLSVRRLKGPVARTVGPILPDVEYKVVGID-GKV 441
Query: 318 LPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGV 377
LP G KG + V+ Q+M GYFK+ + T + L EDGW NTGD+ + ++
Sbjct: 442 LPYGEKGELWVKSPQIMSGYFKDKAKTNEVLTEDGWFNTGDLVRLTINNE---------- 491
Query: 378 LVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPD 431
+ + GR+KDTIVL GEN+EP LE +S I I+++GQDQ+ GA+IVP+
Sbjct: 492 ISIVGRSKDTIVLRGGENIEPEPLERVLGKSLFIENIMIVGQDQKFLGAVIVPN 545
>gi|408671205|ref|YP_006871276.1| long-chain-fatty-acid CoA ligase [Borrelia garinii NMJW1]
gi|407241027|gb|AFT83910.1| long-chain-fatty-acid CoA ligase [Borrelia garinii NMJW1]
Length = 645
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 160/414 (38%), Positives = 247/414 (59%), Gaps = 22/414 (5%)
Query: 22 IPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTH 81
I VFSY ++++LG E +A S D + E S DIAT +YTSGTTG PKGVML H
Sbjct: 150 ITVFSYKKLLELGAEYLRANPKSFDI----EIEKGSSKDIATIIYTSGTTGMPKGVMLRH 205
Query: 82 KNLLHQIRSLYDIVPA-ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN--LKD 138
++ + Q+ LYD +PA + G +S+LP WH +ERAC Y + +G+ + Y+ L
Sbjct: 206 ESFIFQLDRLYDYLPAIKPGKIMISILPLWHSFERACEYIVALKGVAIAYSKPIGPVLLK 265
Query: 139 DLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFC 198
D P +ISVP ++E + GI K++ + S +++V ++I Y + GF
Sbjct: 266 DFLLLNPQMIISVPRIWEGIRIGIIKKV-SESLIKKLVFGGFLKIGIIYAKLNEKFLGFS 324
Query: 199 LTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSL 257
K+P+ +++ L+ I +++P+ LL + LV+KKI++A+G + + GVSGGG+L
Sbjct: 325 PV--YKKPNLFISIFSKLFLFIGIILIFPIKLLGDILVFKKIKNALGQNFEFGVSGGGAL 382
Query: 258 PMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEV 317
++D F++A+G+KV GYGLTE+ PV++ RR V +VG + E K+V + +V
Sbjct: 383 VDYVDYFFKAVGIKVLEGYGLTETGPVLSVRRLKGPVARTVGPILPDVEYKVVGID-GKV 441
Query: 318 LPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGV 377
LP G KG + V+ Q+M GYFK+ + T + L EDGW NTGD+ + ++
Sbjct: 442 LPYGEKGELWVKSPQIMSGYFKDKAKTNEVLTEDGWFNTGDLVRLTINNE---------- 491
Query: 378 LVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPD 431
+ + GR+KDTIVL GEN+EP LE +S I I+++GQDQ+ GA+IVP+
Sbjct: 492 ISIVGRSKDTIVLRGGENIEPEPLERVLGKSLFIENIMIVGQDQKFLGAVIVPN 545
>gi|224533578|ref|ZP_03674167.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi CA-11.2a]
gi|225548723|ref|ZP_03769770.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi 94a]
gi|224513251|gb|EEF83613.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi CA-11.2a]
gi|225370753|gb|EEH00189.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi 94a]
Length = 645
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 172/480 (35%), Positives = 274/480 (57%), Gaps = 28/480 (5%)
Query: 19 VEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVM 78
+ I VFSY ++++LG E +A S D + E S DIAT +YTSGTTG PKGVM
Sbjct: 147 IGNITVFSYKKLLELGTEYLRANPKSFDM----EIEKGSSKDIATIIYTSGTTGMPKGVM 202
Query: 79 LTHKNLLHQIRSLYDIVPA-ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN-- 135
L H++ + Q+ LYD +P + G +S+LP WH +ERAC Y + +GI + Y+
Sbjct: 203 LRHESFIFQLDRLYDYLPTLKPGKIMISILPLWHSFERACEYIVALKGIAIAYSKPIGPV 262
Query: 136 LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYE 195
L D P ++SVP ++E + GI K++ + S ++ V +++ Y K +
Sbjct: 263 LLKDFLLLNPQMIVSVPRIWEGIRIGIIKKV-SESFIKKFVFGGFLKVGIIYAKLKERFL 321
Query: 196 GFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGG 254
G L+ K+ ++L++L L+ I +++P+ LL + LV+KKI++A G + + GVSGG
Sbjct: 322 G--LSPIYKKTNFLISLFSKLFLFIGIVLIFPIKLLGDILVFKKIKNAFGQNFEFGVSGG 379
Query: 255 GSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAET 314
G+L ++D F++A+G+KV GYGLTE+ P+++ RR V +VG + E K+V +
Sbjct: 380 GALVDYVDYFFKAVGIKVLEGYGLTETGPILSVRRLKGPVAKTVGPILPDVEYKVVGID- 438
Query: 315 NEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRC 374
VLP G KG + VR Q+M GYFK+ + T + L EDGW NTGD+ + ++
Sbjct: 439 GRVLPYGEKGELWVRSPQIMSGYFKDKAKTSEVLTEDGWFNTGDLVRLTINNE------- 491
Query: 375 GGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEE 434
+ + GR+KDTIVL GEN+EP LE +S I I+++GQDQ+ GA+IVP+ +
Sbjct: 492 ---ISIVGRSKDTIVLRGGENIEPEPLERVLGKSLFIENIMIVGQDQKFLGAVIVPNFDN 548
Query: 435 VLMAAKRLSIVHADASELSKEKTISLLYGELRKWT--SKCSF----QIGPIHVVDEPFTV 488
+ A + + S+L + ++ LY + T +K F +I ++ +PFT+
Sbjct: 549 LEKWANSSGVSFSSRSDLLANEDVNKLYSKHISDTINTKLGFKNFEKIVGFVLLQDPFTI 608
>gi|225552232|ref|ZP_03773172.1| long-chain-fatty-acid CoA ligase [Borrelia sp. SV1]
gi|225371230|gb|EEH00660.1| long-chain-fatty-acid CoA ligase [Borrelia sp. SV1]
Length = 645
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 173/480 (36%), Positives = 274/480 (57%), Gaps = 28/480 (5%)
Query: 19 VEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVM 78
+ I VFSY ++++LG E +A S D + E S DIAT +YTSGTTG PKGVM
Sbjct: 147 IGNITVFSYKKLLELGTEYLRANPKSFDM----EIEKGSSKDIATIIYTSGTTGMPKGVM 202
Query: 79 LTHKNLLHQIRSLYDIVPA-ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN-- 135
L H++ + Q+ LYD +P + G +S+LP WH +ERAC Y + +GI + Y+
Sbjct: 203 LRHESFIFQLDRLYDYLPTLKPGKIMISILPLWHSFERACEYIVALKGIAIAYSKPIGPV 262
Query: 136 LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYE 195
L D P +ISVP ++E + GI K++ + S ++ V +++ Y K +
Sbjct: 263 LLKDFLLLNPQMIISVPRIWEGIRIGIIKKV-SESFIKKFVFGGFLKVGIIYAKLKERFL 321
Query: 196 GFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGG 254
G L+ K+ ++L++L L+ I +++P+ LL + LV+KKI++A+G + + GVSGG
Sbjct: 322 G--LSPIYKKTNFLISLFSKLFLFIGIVLIFPIKLLGDILVFKKIKNALGQNFEFGVSGG 379
Query: 255 GSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAET 314
G+L ++D F++A+G+KV GYGLTE+ P+++ RR V +VG + E K+V +
Sbjct: 380 GALVDYVDYFFKAVGIKVLEGYGLTETGPILSVRRFKGPVAKTVGPILPDVEYKVVGID- 438
Query: 315 NEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRC 374
VLP G KG + VR Q+M GYFK+ T + L EDGW NTGD+ + ++
Sbjct: 439 GRVLPYGEKGELWVRSPQIMSGYFKDKVKTSEVLTEDGWFNTGDLVRLTINNE------- 491
Query: 375 GGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEE 434
+ + GR+KDTIVL GEN+EP LE +S I I+++GQDQ+ GA+IVP+ +
Sbjct: 492 ---ISIVGRSKDTIVLRGGENIEPEPLERVLGKSLFIENIMIVGQDQKFLGAVIVPNFDN 548
Query: 435 VLMAAKRLSIVHADASELSKEKTISLLYGELRKWT--SKCSF----QIGPIHVVDEPFTV 488
+ A + + S+L + ++ LY + T +K F +I ++ +PFT+
Sbjct: 549 LEKWANSSGVSFSSRSDLLANEDVNKLYSKHISDTINTKLGFKNFEKIVGFVLLQDPFTI 608
>gi|386347051|ref|YP_006045300.1| AMP-dependent synthetase and ligase [Spirochaeta thermophila DSM
6578]
gi|339412018|gb|AEJ61583.1| AMP-dependent synthetase and ligase [Spirochaeta thermophila DSM
6578]
Length = 636
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 158/431 (36%), Positives = 243/431 (56%), Gaps = 26/431 (6%)
Query: 35 RESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDI 94
RE KA + + + DD+AT +YTSGTTG PKGVML H++ + QI L
Sbjct: 162 REKGKALLSQDPQLIDREIDQGTGDDLATIIYTSGTTGEPKGVMLPHRSFIFQIDKLKKP 221
Query: 95 VPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAV--RNLKDDLQRYQPHYMISVP 152
+ E GD FLS+LP WH +ERA Y + RG + Y+ + L +D+ + P ++ +VP
Sbjct: 222 LDVEVGDIFLSILPIWHSFERAVDYVLMERGGAVAYSKPVGKILLEDMAKVSPQWLAAVP 281
Query: 153 LVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFC---LTRNQKQPSYL 209
V+E + + + + + A RV+ + + Y F ++ G L RN+
Sbjct: 282 RVFEGIRNAVYRNVNKGPAVSRVLFHFFVGVGQLYAYFSNMFRGLLPDFLPRNR------ 335
Query: 210 VALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAI 268
++D + A + +L P L E LV++K+++ +G K GVSGGG+LP H+D F++A+
Sbjct: 336 --ILDKVVAFLPLVLLAPFRGLGEVLVFRKLKAKLGGRFKTGVSGGGALPPHVDTFFQAV 393
Query: 269 GVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKV 328
G++V GYGLTE+ PV+A R ++G+VG ++ E K+V E + LP G KG++ V
Sbjct: 394 GIQVLEGYGLTETGPVLAVRNQKAPMVGTVGPLLDEVEYKVV-GEHGDPLPPGHKGVLWV 452
Query: 329 RGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTI 388
+ QVM GY+K P AT + L +DGWLNTGD+ + GR + GRAKDTI
Sbjct: 453 KSPQVMLGYYKRPEATAEVL-KDGWLNTGDL----VRFTHGRE------FAIVGRAKDTI 501
Query: 389 VLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHAD 448
VL GENVEP +EE S I +V+GQDQ+ GA+IVP++E + A+ + + +
Sbjct: 502 VLRGGENVEPGPIEEKLKESEFIENAMVVGQDQKFLGALIVPNRERIEEYAREKGLTYME 561
Query: 449 ASELSKEKTIS 459
+L ++ +
Sbjct: 562 YEDLVEQAEVQ 572
>gi|374584914|ref|ZP_09658006.1| AMP-dependent synthetase and ligase [Leptonema illini DSM 21528]
gi|373873775|gb|EHQ05769.1| AMP-dependent synthetase and ligase [Leptonema illini DSM 21528]
Length = 640
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 163/444 (36%), Positives = 249/444 (56%), Gaps = 30/444 (6%)
Query: 20 EEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVML 79
++ V++ ++I GRE R D R + SDD+ T +YTSGTTG PKGVML
Sbjct: 155 QDADVYAQADLIRRGRELRH----QGDRRVEEHMAGLSSDDLFTLIYTSGTTGAPKGVML 210
Query: 80 THKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDD 139
TH N++ Q+ + VP D+ LS+LP WH++ER RG Y+ VR+L+DD
Sbjct: 211 THANMISQLERIP--VPIRTDDRVLSILPVWHIFERVFEMIALGRGCCTYYSNVRSLRDD 268
Query: 140 LQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCL 199
++ P +M S P ++E++Y+GI + +S RR + + +S + R +G L
Sbjct: 269 MKNVAPTFMASAPRLWESVYAGILTNLEKASPVRRGLFALTLSVSRRFRGALRFLKGNEL 328
Query: 200 TRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLP 258
+ S +++ LW+ + +L L +++V KKI++A G + G SGGG+LP
Sbjct: 329 DITGR--SSFLSMFRALWSIVEVLLLAVPFFLLDRIVLKKIRAATGGALRGTCSGGGALP 386
Query: 259 MHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVL 318
H+DLF+ G+ V GYGLTE+SPV++ R P V G+VG T+++I D T E+L
Sbjct: 387 YHVDLFFNDAGIPVLEGYGLTETSPVLSVRTPDLLVPGTVGPIYPDTDLRITDLNTGELL 446
Query: 319 PA---------GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRG 369
G KG + VRG Q+M+GY+K+ +AT + L +DGW NTGD+G +
Sbjct: 447 FTTEAGGPKRRGVKGEIHVRGPQIMKGYYKDQAATDKVL-KDGWFNTGDLGMMT------ 499
Query: 370 RSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIV 429
L + GR+K+TIVL GENVEP+ +E L+S IRQ++V+GQD++ A+IV
Sbjct: 500 ----YNDCLKITGRSKETIVLLNGENVEPVPIENTLLQSPYIRQLIVVGQDKKYLTALIV 555
Query: 430 PDKEEVLMAAKRLSIVHADASELS 453
P+ E+ K + + D LS
Sbjct: 556 PEIEK-FPGHKEFTTLAIDPEALS 578
>gi|51598846|ref|YP_073034.1| long-chain-fatty-acid CoA ligase [Borrelia garinii PBi]
gi|51573417|gb|AAU07442.1| long-chain-fatty-acid CoA ligase [Borrelia garinii PBi]
Length = 645
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 160/414 (38%), Positives = 247/414 (59%), Gaps = 22/414 (5%)
Query: 22 IPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTH 81
I VFSY ++++LG E +A S D + E S DIAT +YTSGTTG PKGVML H
Sbjct: 150 ITVFSYKKLLELGAEHLRANPKSFDI----EIEKGSSKDIATIIYTSGTTGMPKGVMLRH 205
Query: 82 KNLLHQIRSLYDIVPA-ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN--LKD 138
++ + Q+ LYD +PA + G +S+LP WH +ERAC Y + +G+ + Y+ L
Sbjct: 206 ESFIFQLDRLYDYLPAIKPGKIMISILPLWHSFERACEYIVALKGVAIAYSKPIGPVLLK 265
Query: 139 DLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFC 198
D P +ISVP ++E + GI K++ + S +++V ++I Y + GF
Sbjct: 266 DFLLLNPQMIISVPRIWEGIRIGIIKKV-SESLIKKLVFGGFLKIGIIYAKLNEKFLGFS 324
Query: 199 LTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSL 257
++P+ +++ L+ I +++P+ LL + LV+KKI++A+G + + GVSGGG+L
Sbjct: 325 PV--YRKPNLFISIFSKLFLFIGIILIFPIKLLGDILVFKKIKNALGQNFEFGVSGGGAL 382
Query: 258 PMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEV 317
++D F++AIG+KV GYGLTE+ PV++ RR V +VG + E K+V + +V
Sbjct: 383 VDYVDYFFKAIGIKVLEGYGLTETGPVLSVRRLKGPVARTVGPILPDVEYKVVGID-GKV 441
Query: 318 LPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGV 377
LP G KG + V+ Q+M GYFK+ + T + L EDGW NTGD+ + ++
Sbjct: 442 LPYGEKGELWVKSPQIMSGYFKDKAKTSEVLTEDGWFNTGDLVRLTINNE---------- 491
Query: 378 LVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPD 431
+ + GR+KDTIVL GEN+EP LE +S I I+++GQDQ+ GA+IVP+
Sbjct: 492 ISIVGRSKDTIVLRGGENIEPEPLERVLGKSLFIENIMIVGQDQKFLGAVIVPN 545
>gi|219685238|ref|ZP_03540058.1| long-chain-fatty-acid CoA ligase [Borrelia garinii Far04]
gi|219673334|gb|EED30353.1| long-chain-fatty-acid CoA ligase [Borrelia garinii Far04]
Length = 645
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 162/447 (36%), Positives = 260/447 (58%), Gaps = 22/447 (4%)
Query: 22 IPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTH 81
I +FSY ++++LG E +A S D + E S DIAT +YTSGTTG PKGVML H
Sbjct: 150 IAIFSYKKLLELGAEHLRANPKSFDI----EIEKGSSKDIATIIYTSGTTGMPKGVMLRH 205
Query: 82 KNLLHQIRSLYDIVPA-ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN--LKD 138
++ + Q+ LYD +P + G +S+LP WH +ERAC Y + +G+ + Y+ L
Sbjct: 206 ESFIFQLDRLYDYLPEIKPGKIMISILPLWHSFERACEYIVALKGVTIAYSKPIGPVLLK 265
Query: 139 DLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFC 198
D P +ISVP ++E + GI K++ + S +++V +++ Y + GF
Sbjct: 266 DFLLLNPQMIISVPRIWEGIRIGIIKKV-SESLIKKLVFGGFLKVGIIYAKLNEKFLGFS 324
Query: 199 LTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSL 257
K+P+ +++ L+ I +++P+ LL + LV+KKI++A+G + + GVSGGG+L
Sbjct: 325 PV--YKKPNLFISIFSKLFLFIGIILIFPIKLLGDILVFKKIKNALGQNFEFGVSGGGAL 382
Query: 258 PMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEV 317
++D F++A+G+KV GYGLTE+ P+++ RR V +VG + E K+V + +V
Sbjct: 383 VDYVDYFFKAVGIKVLEGYGLTETGPILSVRRLKGPVARTVGPILPDVEYKVVGID-GKV 441
Query: 318 LPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGV 377
LP G KG + VR Q+M GYFK+ + T + L EDGWL TGD+ + ++
Sbjct: 442 LPYGEKGELWVRSPQIMSGYFKDKAKTSEVLTEDGWLKTGDLVRLTINNE---------- 491
Query: 378 LVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLM 437
+ + GR+KDTIVL GEN+EP LE +S I I+++GQDQ+ GA+IVP+ + +
Sbjct: 492 ISIVGRSKDTIVLRGGENIEPEPLERILGKSLFIENIMIVGQDQKFLGAVIVPNFDNLEK 551
Query: 438 AAKRLSIVHADASELSKEKTISLLYGE 464
A + + S+L + ++ LY +
Sbjct: 552 WANSNGVSFSSRSDLLVNEDVNKLYSK 578
>gi|183221027|ref|YP_001839023.1| putative long-chain-fatty-acid CoA ligase [Leptospira biflexa
serovar Patoc strain 'Patoc 1 (Paris)']
gi|189911121|ref|YP_001962676.1| long-chain-fatty-acid--CoA ligase [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167775797|gb|ABZ94098.1| Long-chain-fatty-acid--CoA ligase [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167779449|gb|ABZ97747.1| Putative long-chain-fatty-acid CoA ligase [Leptospira biflexa
serovar Patoc strain 'Patoc 1 (Paris)']
Length = 644
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 172/482 (35%), Positives = 264/482 (54%), Gaps = 39/482 (8%)
Query: 29 EIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI 88
++I+ G+E R S + R + I DD+ T +YTSGTTG PKGVML H N++HQ
Sbjct: 150 DLIEKGKELRAKGSKKAEER----MKAILPDDLFTIIYTSGTTGMPKGVMLKHSNMIHQT 205
Query: 89 RS-LYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHY 147
+ L ++ + ++ LS+LP WHV+ER Y + G YT VR+L+DD+++ +P +
Sbjct: 206 TAILGSMIDIKADERMLSILPVWHVFERVFEYLAIAAGCATYYTNVRDLRDDMKKAKPTF 265
Query: 148 MISVPLVYETLYSGIQKQIF---TSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQK 204
M S P ++E++Y+GI +I + A RR + S + A R +G + +
Sbjct: 266 MASAPRLWESIYNGIYTRINDPKQTPAIRRGLFNLAYFFSKHFNASMRFLKGNQVDYVGR 325
Query: 205 QPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDL 263
P +V+L ++ + +L + L + +V KI+ A G KA VSGGG+L H+D
Sbjct: 326 NP--IVSLFKGVYYLTVAIVLAVPYFLLDLVVLSKIREATGGELKASVSGGGALQRHVDA 383
Query: 264 FYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVD--------AETN 315
F+ IG+ V GYG+TE+SPVI+ R V GSVG T ++I D + N
Sbjct: 384 FFNDIGINVLEGYGMTETSPVISVRTFKKLVQGSVGVITPETSVQIRDDLGKVLTHVDAN 443
Query: 316 EVLPAG---SKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSR 372
L +G +G++ +RG QVM+GY+KNP T + L +DGW++TGDIG +
Sbjct: 444 NQLVSGKYGQRGVIHIRGPQVMKGYYKNPETTAKVL-KDGWMDTGDIGMFNFKKT----- 497
Query: 373 RCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDK 432
L + GRAKDT+VL GENVEP+ +E+ S I Q +VIGQDQ+ GAI++PD
Sbjct: 498 -----LTITGRAKDTVVLLGGENVEPVPIEDKLTESPFISQCMVIGQDQKNLGAIVIPDF 552
Query: 433 EEVLMAAKRLSIVHADASEL-SKEKTISLLYGELRKW-TSKCSF----QIGPIHVVDEPF 486
++++ AK I D +L K + E++ +K F Q+ P ++ +PF
Sbjct: 553 DQLMAWAKENGISETDKQKLIENPKVLDFYKKEIKALNNTKTGFKSFEQVTPFILITKPF 612
Query: 487 TV 488
V
Sbjct: 613 EV 614
>gi|226320819|ref|ZP_03796372.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi 29805]
gi|226233761|gb|EEH32489.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi 29805]
Length = 645
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 171/480 (35%), Positives = 274/480 (57%), Gaps = 28/480 (5%)
Query: 19 VEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVM 78
+ I VFSY ++++LG E +A S D + E S DIAT +YTSGTTG PKGVM
Sbjct: 147 IGNISVFSYKKLLELGTEYLRANPKSFDM----EIEKGSSKDIATIIYTSGTTGMPKGVM 202
Query: 79 LTHKNLLHQIRSLYDIVPA-ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN-- 135
L H++ + Q+ LYD +P + G +S+LP WH +ERAC Y + +GI + Y+
Sbjct: 203 LRHESFIFQLDRLYDYLPTLKPGKIMISILPLWHSFERACEYIVALKGIAIAYSKPIGPV 262
Query: 136 LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYE 195
L D P ++SVP ++E + GI K++ + S ++ V +++ Y K +
Sbjct: 263 LLKDFLLLNPQMIVSVPRIWEGIRIGIIKKV-SESFIKKFVFGGFLKVGIIYAKLKERFL 321
Query: 196 GFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGG 254
G L+ K+ ++L++L L+ I +++P+ LL + LV+KKI++A+G + + GVSGG
Sbjct: 322 G--LSPIYKKTNFLISLFSKLFLFIGIVLIFPIKLLGDILVFKKIKNALGQNFEFGVSGG 379
Query: 255 GSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAET 314
G+L ++D F++A+G+KV GYGLTE+ P+++ RR V +VG + E K+V +
Sbjct: 380 GALVDYVDYFFKAVGIKVLEGYGLTETGPILSVRRLKGPVAKTVGPILPDVEYKVVGID- 438
Query: 315 NEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRC 374
VLP G KG + VR Q+M GYFK+ + T + L EDGW NTGD+ + ++
Sbjct: 439 GRVLPYGEKGELWVRSPQIMSGYFKDKAKTSEVLTEDGWFNTGDLVRLTINNE------- 491
Query: 375 GGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEE 434
+ + GR+KDTIVL GEN+EP LE +S I I+++GQDQ+ GA+I P+ +
Sbjct: 492 ---ISIVGRSKDTIVLRGGENIEPEPLERVLGKSLFIENIMIVGQDQKFLGAVIAPNFDN 548
Query: 435 VLMAAKRLSIVHADASELSKEKTISLLYGELRKWT--SKCSF----QIGPIHVVDEPFTV 488
+ A + + S+L + ++ LY + T +K F +I ++ +PFT+
Sbjct: 549 LEKWANSSGVSFSSRSDLLANEDVNKLYSKHISDTINTKLGFKNFEKIVGFVLLQDPFTI 608
>gi|216263481|ref|ZP_03435476.1| long-chain-fatty-acid CoA ligase [Borrelia afzelii ACA-1]
gi|215980325|gb|EEC21146.1| long-chain-fatty-acid CoA ligase [Borrelia afzelii ACA-1]
Length = 645
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 163/447 (36%), Positives = 256/447 (57%), Gaps = 22/447 (4%)
Query: 22 IPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTH 81
I +FSY ++++LG E +A S D + E S DIAT +YTSGTTG PKGVML H
Sbjct: 150 ITIFSYKKLLELGVEYLRANPKSFDM----EIEKGSSKDIATIIYTSGTTGMPKGVMLRH 205
Query: 82 KNLLHQIRSLYDIVPA-ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN--LKD 138
++ + Q+ LYD +P + G +S+LP WH +ERAC Y + +GI + Y+ L
Sbjct: 206 ESFIFQLDRLYDYLPTLKPGKIMISILPLWHSFERACEYIVALKGIAIAYSKPIGPVLLK 265
Query: 139 DLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFC 198
D P +ISVP ++E + GI K++ + S ++++ +RI Y K GF
Sbjct: 266 DFSLLNPQMIISVPRIWEGIRIGIIKKV-SESLIKKLMFGGFLRIGIVYAKLKEKILGFS 324
Query: 199 LTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSL 257
K+P+ ++L ++ + ++ P+ LL + LV+KKI+ A+G + + GVSGGG+L
Sbjct: 325 PV--YKKPNLFISLFSKIFLFVGIVLILPIKLLGDILVFKKIKKALGQNFEFGVSGGGAL 382
Query: 258 PMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEV 317
++D F++A+G+KV GYGLTE+ P+++ RR V +VG + E K+V + +V
Sbjct: 383 VDYVDYFFKAVGIKVLEGYGLTETGPILSVRRLKGPVARTVGPILPDVEYKVVGVD-EKV 441
Query: 318 LPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGV 377
L G KG + VR Q+M GYFK+ + T + L EDGW NTGD+ + ++
Sbjct: 442 LSYGEKGELWVRSPQIMSGYFKDKAKTSEVLTEDGWFNTGDLVRLTINNE---------- 491
Query: 378 LVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLM 437
+ + GR+KDTIVL GEN+EP LE +S I I+++GQDQ+ GAIIVP+ + +
Sbjct: 492 ISIVGRSKDTIVLRGGENIEPEPLERVLGKSLFIENIMIVGQDQKFLGAIIVPNFDNLEK 551
Query: 438 AAKRLSIVHADASELSKEKTISLLYGE 464
A + + +L + ++ LY +
Sbjct: 552 WANSSGVSFSSRGDLLANEDVNKLYSK 578
>gi|374586232|ref|ZP_09659324.1| AMP-dependent synthetase and ligase [Leptonema illini DSM 21528]
gi|373875093|gb|EHQ07087.1| AMP-dependent synthetase and ligase [Leptonema illini DSM 21528]
Length = 637
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 174/481 (36%), Positives = 267/481 (55%), Gaps = 40/481 (8%)
Query: 24 VFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKN 83
V S ++I+ G++ R + D R + + DD+ T +YTSGTTG PKGVMLTH N
Sbjct: 152 VLSMYDLIEKGKKLR----EQGDRRAEERIAQVKEDDLFTLIYTSGTTGAPKGVMLTHAN 207
Query: 84 LLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRY 143
++ Q+ ++ + D+ +S+LP WHV+ER SRG+ YT +RN+++DL
Sbjct: 208 MVSQVLNMPSDINLTPSDRIVSILPVWHVFERVFEMLAISRGVCTYYTNIRNIREDLAIV 267
Query: 144 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQ 203
+P +M S P ++E +Y GI ++ A RR + A S + R L +
Sbjct: 268 RPTFMASAPRLWENIYQGILAKVEGGPAVRRALFNAAYYCSRNFKGAVRFLSSRQLDTHG 327
Query: 204 KQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAI-GISKAGVSGGGSLPMHID 262
+ P + L W R+ + L P +LL + +V KKI++A G+ + VSGGG+LP+H+D
Sbjct: 328 RNPGLSLLLGLWNILRLF-SFLIP-NLLLDLIVLKKIRAATGGVLRGSVSGGGALPIHVD 385
Query: 263 LFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVL---P 319
F+ IG+ V GYG+TE+SPV+A R V G+VG +TE++++D +VL
Sbjct: 386 EFFNNIGIPVLEGYGMTETSPVLAVRTYKRLVPGTVGPIWPNTELRLIDIANGQVLYSTE 445
Query: 320 AGS------KGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRR 373
AGS KG + VRG QVM+GY+KNP AT + L +DGW+NTGD+G I ++
Sbjct: 446 AGSPQRRGVKGEIHVRGPQVMKGYYKNPEATNKVL-KDGWMNTGDLGMITFNN------- 497
Query: 374 CGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 433
C L + GR+K+T+VL GENVEP+ +E L S I Q +V+GQD++ AI+VP
Sbjct: 498 C---LKIVGRSKETVVLLGGENVEPVPIENRLLESPFIAQCMVVGQDKKYLSAIVVP--- 551
Query: 434 EVLMAAKRLSIVHADASELSKEKTIS-LLYGELRKWTS-----KCSFQIGPIHVVDEPFT 487
+ L A +L+K + L+ E++K S K +I + ++ +PF
Sbjct: 552 ----SVDHLKDYGASTEDLAKNAEVQRLIRDEVKKLISNEAGFKSFEKIVDVRILPKPFE 607
Query: 488 V 488
V
Sbjct: 608 V 608
>gi|374621808|ref|ZP_09694338.1| AMP-dependent synthetase and ligase [Ectothiorhodospira sp. PHS-1]
gi|373940939|gb|EHQ51484.1| AMP-dependent synthetase and ligase [Ectothiorhodospira sp. PHS-1]
Length = 629
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 163/446 (36%), Positives = 258/446 (57%), Gaps = 30/446 (6%)
Query: 54 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 113
E I ++D+ T +YTSGTTG PKGVML H N++H IR+L ++ D ++S+LP WH++
Sbjct: 173 EPIQTEDLLTIIYTSGTTGTPKGVMLDHGNIMHNIRTLPPLIALNETDVWVSILPSWHIF 232
Query: 114 ERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 173
ER Y +RG L+Y+++R DL+ Y+P + +VP V+E LY+ I ++ +
Sbjct: 233 ERTAEYIGIARGSCLVYSSIRTFAQDLETYRPTLVATVPRVWEALYTRITTELKKKDPKK 292
Query: 174 RVVARALIRISFAYTAFKRIYEGFCLTRNQ----KQPSYLVALIDWLWARIICAILWPLH 229
V L+R+S Y +RI R+Q +P L D A + +L+ +
Sbjct: 293 ARVFSLLVRVSATYRRNQRIL------RDQLPVFAKPPVLRRAGDKTRAALTNVLLFLPN 346
Query: 230 LLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAAR 288
LLA K ++ +Q G KA +SGGGSLP ++D + +AIG+++ YG+TE SP IA R
Sbjct: 347 LLARK-KFRLVQEKFGGRLKAAISGGGSLPPYLDEWIDAIGIRIINAYGMTECSPGIAGR 405
Query: 289 RPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQAL 348
C+V G++G + TE++IVDA T++ LP G++G ++VRG+QV +GY+ N A QA
Sbjct: 406 GLGCHVFGTLGPAVGETELRIVDA-TDQPLPPGTEGEIQVRGAQVFKGYYDNDIANAQAF 464
Query: 349 DEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRS 408
DG+L TGD+G + G LV+ GRAKD IVL++GENV+P +E
Sbjct: 465 TNDGFLRTGDLGRMT----------LTGELVITGRAKDIIVLASGENVDPTNIEATLSMF 514
Query: 409 SLIRQIVVIGQDQRRPGAIIVPDKEEVL-MAAKRLSIVHADASELSKEK-TISLLYGELR 466
++ V++GQD++ GA+IVPD E++ ++ + + +A E K+K + L GE+
Sbjct: 515 PFVKDAVLVGQDKKGLGALIVPDMEKLREFVQEKYNQIVGEADEALKDKHLLDRLRGEMN 574
Query: 467 KWTS-----KCSFQIGPIHVVDEPFT 487
K + ++ I+ +D+ FT
Sbjct: 575 KLLHPRKGFRPHEKLHSIYFLDKEFT 600
>gi|111115421|ref|YP_710039.1| long-chain-fatty-acid CoA ligase [Borrelia afzelii PKo]
gi|384207081|ref|YP_005592803.1| AMP-binding protein [Borrelia afzelii PKo]
gi|110890695|gb|ABH01863.1| long-chain-fatty-acid CoA ligase [Borrelia afzelii PKo]
gi|342856965|gb|AEL69813.1| AMP-binding enzyme family protein [Borrelia afzelii PKo]
Length = 645
Score = 275 bits (702), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 163/447 (36%), Positives = 256/447 (57%), Gaps = 22/447 (4%)
Query: 22 IPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTH 81
I +FSY ++++LG E +A S D + E S DIAT +YTSGTTG PKGVML H
Sbjct: 150 ITIFSYKKLLELGAEYLRANPKSFDM----EIEKGSSKDIATIIYTSGTTGMPKGVMLRH 205
Query: 82 KNLLHQIRSLYDIVPA-ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN--LKD 138
++ + Q+ LYD +P + G +S+LP WH +ERAC Y + +GI + Y+ L
Sbjct: 206 ESFIFQLDRLYDYLPTLKPGKIMISILPLWHSFERACEYIVALKGIAIAYSKPIGPVLLK 265
Query: 139 DLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFC 198
D P +ISVP ++E + GI K++ + S ++++ +RI Y K GF
Sbjct: 266 DFLLLNPQMIISVPRIWEGIRIGIIKKV-SESLIKKLMFGGFLRIGIVYAKLKEKILGFS 324
Query: 199 LTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSL 257
K+P+ ++L ++ + ++ P+ LL + LV+KKI+ A+G + + GVSGGG+L
Sbjct: 325 PV--YKKPNLFISLFSKIFLFVGIVLILPIKLLGDILVFKKIKKALGQNFEFGVSGGGAL 382
Query: 258 PMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEV 317
++D F++A+G+KV GYGLTE+ P+++ RR V +VG + E K+V + +V
Sbjct: 383 VDYVDYFFKAVGIKVLEGYGLTETGPILSVRRLKGPVARTVGPILPDVEYKVVGVD-GKV 441
Query: 318 LPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGV 377
L G KG + VR Q+M GYFK+ + T + L EDGW NTGD+ + ++
Sbjct: 442 LSYGEKGELWVRSPQIMSGYFKDKAKTSEVLTEDGWFNTGDLVRLTINNE---------- 491
Query: 378 LVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLM 437
+ + GR+KDTIVL GEN+EP LE +S I I+++GQDQ+ GAIIVP+ + +
Sbjct: 492 ISIVGRSKDTIVLRGGENIEPEPLERVLGKSLFIENIMIVGQDQKFLGAIIVPNFDNLEK 551
Query: 438 AAKRLSIVHADASELSKEKTISLLYGE 464
A + + +L + ++ LY +
Sbjct: 552 WANSSGVSFSSRGDLLANEDVNKLYSK 578
>gi|410679373|ref|YP_006931775.1| long-chain-fatty-acid CoA ligase [Borrelia afzelii HLJ01]
gi|408536761|gb|AFU74892.1| long-chain-fatty-acid CoA ligase [Borrelia afzelii HLJ01]
Length = 651
Score = 275 bits (702), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 163/447 (36%), Positives = 256/447 (57%), Gaps = 22/447 (4%)
Query: 22 IPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTH 81
I +FSY ++++LG E +A S D + E S DIAT +YTSGTTG PKGVML H
Sbjct: 156 ITIFSYKKLLELGAEYLRANPKSFDM----EIEKGSSKDIATIIYTSGTTGMPKGVMLRH 211
Query: 82 KNLLHQIRSLYDIVPA-ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN--LKD 138
++ + Q+ LYD +P + G +S+LP WH +ERAC Y + +GI + Y+ L
Sbjct: 212 ESFIFQLDRLYDYLPTLKPGKIMISILPLWHSFERACEYIVALKGIAIAYSKPIGPVLLK 271
Query: 139 DLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFC 198
D P +ISVP ++E + GI K++ + S ++++ +RI Y K GF
Sbjct: 272 DFLLLNPQMIISVPRIWEGIRIGIIKKV-SESLIKKLMFGGFLRIGIVYAKLKEKILGFS 330
Query: 199 LTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSL 257
K+P+ ++L ++ + ++ P+ LL + LV+KKI+ A+G + + GVSGGG+L
Sbjct: 331 PV--YKKPNLFISLFSKIFLFVGIVLILPIKLLGDILVFKKIKKALGQNFEFGVSGGGAL 388
Query: 258 PMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEV 317
++D F++A+G+KV GYGLTE+ P+++ RR V +VG + E K+V + +V
Sbjct: 389 VDYVDYFFKAVGIKVLEGYGLTETGPILSVRRLKGPVARTVGPILPDVEYKVVGVD-GKV 447
Query: 318 LPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGV 377
L G KG + VR Q+M GYFK+ + T + L EDGW NTGD+ + ++
Sbjct: 448 LSYGEKGELWVRSPQIMSGYFKDKAKTSEVLTEDGWFNTGDLVRLTINNE---------- 497
Query: 378 LVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLM 437
+ + GR+KDTIVL GEN+EP LE +S I I+++GQDQ+ GAIIVP+ + +
Sbjct: 498 ISIVGRSKDTIVLRGGENIEPEPLERVLGKSLFIENIMIVGQDQKFLGAIIVPNFDNLEK 557
Query: 438 AAKRLSIVHADASELSKEKTISLLYGE 464
A + + +L + ++ LY +
Sbjct: 558 WANSSGVSFSSRGDLLANEDVNKLYSK 584
>gi|219684359|ref|ZP_03539303.1| long-chain-fatty-acid CoA ligase [Borrelia garinii PBr]
gi|219672348|gb|EED29401.1| long-chain-fatty-acid CoA ligase [Borrelia garinii PBr]
Length = 645
Score = 274 bits (701), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 161/447 (36%), Positives = 259/447 (57%), Gaps = 22/447 (4%)
Query: 22 IPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTH 81
I +FSY ++++LG E + S D + E S DIAT +YTSGTTG PKGVML H
Sbjct: 150 ITIFSYKKLLELGAEHLRVNPKSFDI----EIEKGSSKDIATIIYTSGTTGMPKGVMLRH 205
Query: 82 KNLLHQIRSLYDIVPA-ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN--LKD 138
++ + Q+ LYD +P + G +S+LP WH +ERAC Y + +G+ + Y+ L
Sbjct: 206 ESFIFQLDRLYDYLPEIKPGKIMISILPLWHSFERACEYIVALKGVAIAYSKPIGPVLLK 265
Query: 139 DLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFC 198
D P +ISVP ++E + GI K++ + S +++V +++ Y + GF
Sbjct: 266 DFLLLNPQMIISVPRIWEGIRIGIIKKV-SESLIKKLVFGGFLKVGIIYAKLNEKFLGFS 324
Query: 199 LTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSL 257
K+P+ +++ L+ I +++P+ LL + LV+KKI++A+G + + GVSGGG+L
Sbjct: 325 PV--YKKPNLFISIFSKLFLFIGIILIFPIKLLGDILVFKKIKNALGQNFEFGVSGGGAL 382
Query: 258 PMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEV 317
++D F++A+G+KV GYGLTE+ P+++ RR V +VG + E K+V + +V
Sbjct: 383 VDYVDYFFKAVGIKVLEGYGLTETGPILSVRRLKGPVARTVGPILPDVEYKVVGID-GKV 441
Query: 318 LPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGV 377
LP G KG + VR Q+M GYFK+ + T + L EDGWL TGD+ + ++
Sbjct: 442 LPYGEKGELWVRSPQIMSGYFKDKAKTSEVLTEDGWLKTGDLVRLTINNE---------- 491
Query: 378 LVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLM 437
+ + GR+KDTIVL GEN+EP LE +S I I+++GQDQ+ GA+IVP+ + +
Sbjct: 492 ISIVGRSKDTIVLRGGENIEPEPLERILGKSLFIENIMIVGQDQKFLGAVIVPNFDNLEK 551
Query: 438 AAKRLSIVHADASELSKEKTISLLYGE 464
A + + S+L + ++ LY +
Sbjct: 552 WANSNGVSFSSRSDLLVNEDVNRLYSK 578
>gi|224534678|ref|ZP_03675250.1| long-chain-fatty-acid CoA ligase [Borrelia spielmanii A14S]
gi|224513926|gb|EEF84248.1| long-chain-fatty-acid CoA ligase [Borrelia spielmanii A14S]
Length = 645
Score = 274 bits (701), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 162/447 (36%), Positives = 258/447 (57%), Gaps = 22/447 (4%)
Query: 22 IPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTH 81
I +FSY ++++LG E + S D + E S DIAT +YTSGTTG PKGVML H
Sbjct: 150 ITIFSYKKLLELGAEYLRVNPKSFDM----EIEKGSSKDIATIIYTSGTTGMPKGVMLRH 205
Query: 82 KNLLHQIRSLYDIVPA-ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN--LKD 138
++ + Q+ LYD +P + G +S+LP WH +ERAC Y + +GI + Y+ L
Sbjct: 206 ESFIFQLDRLYDYLPTLKPGKIMISILPLWHSFERACEYIVALKGIAIAYSKPIGPVLLK 265
Query: 139 DLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFC 198
D P +ISVP ++E + GI K++ + S ++++ ++I Y K + GF
Sbjct: 266 DFLLLNPQMIISVPRIWEGIRIGIIKKV-SESLIKKLMFGGFLKIGIVYAKLKEKFLGFS 324
Query: 199 LTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSL 257
K+P+ ++L L+ + +++P+ LL + LV+KKI+ A+G + + GVSGGG+L
Sbjct: 325 PV--YKKPNLFISLFLKLFLFVGMILIFPVKLLGDILVFKKIKKALGQNFEFGVSGGGAL 382
Query: 258 PMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEV 317
++D F++A+G+KV GYGLTE+ P+++ RR V +VG + E K+V + +V
Sbjct: 383 VDYVDYFFKAVGIKVLEGYGLTETGPILSVRRFKGPVARTVGPILPDVEYKVVGID-GKV 441
Query: 318 LPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGV 377
LP G KG + V+ QVM GYFK+ + T + L EDGW N+GD+ + ++
Sbjct: 442 LPYGEKGELWVKSPQVMSGYFKDKAKTSEVLTEDGWFNSGDLVRLTINNE---------- 491
Query: 378 LVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLM 437
+ + GR+KDTIVL GEN+EP LE +S I I+++GQDQ+ GAIIVP+ + +
Sbjct: 492 ISIVGRSKDTIVLRGGENIEPEPLERVLGKSLFIENIMIVGQDQKFLGAIIVPNFDNLEK 551
Query: 438 AAKRLSIVHADASELSKEKTISLLYGE 464
A + + +L + ++ LY +
Sbjct: 552 WANSSGVSFSSRGDLLANEDVNKLYSK 578
>gi|445061913|ref|ZP_21374382.1| long-chain acyl-CoA synthetase [Brachyspira hampsonii 30599]
gi|444506705|gb|ELV06998.1| long-chain acyl-CoA synthetase [Brachyspira hampsonii 30599]
Length = 625
Score = 274 bits (701), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 172/476 (36%), Positives = 256/476 (53%), Gaps = 38/476 (7%)
Query: 24 VFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKN 83
++S++++++LG ES D A K K + ++ AT +YTSGTTG PKGV+LTH N
Sbjct: 145 IYSFEKLLELGEESLNG--DEEFAVK--KASKLTNESTATIIYTSGTTGKPKGVILTHGN 200
Query: 84 LLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRY 143
+LH IR L DI+ + G+K L++LP WH+YER Y G T R LK+D
Sbjct: 201 ILHNIRVLPDIIKLQPGEKLLTILPIWHIYERTISYVTAITGCFTAITNKRYLKNDFTEE 260
Query: 144 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLT--- 200
+P ISVP ++ +Y+ + K I R +A+ I+ S Y R
Sbjct: 261 KPDIFISVPAIWVNIYNTVMKNIDRKGTIARNLAKFFIKRSLKYIRSLRFQNDLVYLLGD 320
Query: 201 --RNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKI-QSAIGISKAGVSGGGSL 257
++ K+ Y + + D L+ H +A+K+VY KI + G + +SGGG+L
Sbjct: 321 EYKSHKKSEYSIGIFDPLY-----------HKMAKKMVYSKILELTGGKMRLTISGGGAL 369
Query: 258 PMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEV 317
PM+I+ F EA+G+ + VG+G+TE+SPV+ R P N G+ G PI +I+I D E N +
Sbjct: 370 PMYIEDFVEAVGINLVVGWGITETSPVVTLRSPYKNYRGTCGAPIPEVKIEIRDKEGN-I 428
Query: 318 LPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGV 377
G G+ ++G + + Y+K+P TKQA DG+ N+GD+G G
Sbjct: 429 CKDGVMGVCYIKGPNIFKEYYKDPELTKQA-KVDGFFNSGDLGAYTQQ----------GE 477
Query: 378 LVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLM 437
+VL GRAK+TIVL TGENVEP +E AL S I QI++IGQD+ GAIIV +KE +
Sbjct: 478 IVLTGRAKETIVLLTGENVEPQPIENKALESPYIHQIMLIGQDKASTGAIIVINKENIKE 537
Query: 438 AAKRLSIVHADASELSKEKTISLLYGELRKWTS-KCSFQ----IGPIHVVDEPFTV 488
+ I + + + S L+ EL + K F+ I + + DE FT+
Sbjct: 538 YFDKHKISYDENTLSSSRDVYKLIREELDNLINYKNGFRPYEAIAKMIITDEEFTI 593
>gi|257456081|ref|ZP_05621284.1| AMP-binding enzyme family protein [Treponema vincentii ATCC 35580]
gi|257446539|gb|EEV21579.1| AMP-binding enzyme family protein [Treponema vincentii ATCC 35580]
Length = 640
Score = 274 bits (700), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 165/451 (36%), Positives = 246/451 (54%), Gaps = 31/451 (6%)
Query: 19 VEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVM 78
+ ++SYDEII+ G R+ D+ + +T ++AT ++TSGTTG PKGVM
Sbjct: 153 ISRFAMYSYDEIIERGTAYRQEHPDAVERELEKGADT----EVATIIFTSGTTGEPKGVM 208
Query: 79 LTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN--L 136
LTHKN Q+ L V G+K + +LP WH +ER C Y I + ++Y+ L
Sbjct: 209 LTHKNFAVQLDDLKTRVILHPGEKAIVVLPVWHSFERLCEYVILASAAGMVYSKPVGSIL 268
Query: 137 KDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEG 196
D+ + P SVP ++E++Y+G+ K + + ++ + + + + R G
Sbjct: 269 LADIAKTNPALFPSVPRIWESVYTGVFKAMKQAGGIKQKLFSFFVAVGLFHAHHARNVRG 328
Query: 197 ----FCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGV 251
F +P +++ I +L + P + L LV+KKI++ +G + GV
Sbjct: 329 QNPHFAFYTKITRP--IISFIPFLLSA-------PFYALGNVLVFKKIRTKLGTGFRQGV 379
Query: 252 SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVD 311
SGGG+LP +ID F+ AIGV V GYGLTE++PV++ R V G++G P++ T++KIVD
Sbjct: 380 SGGGALPPNIDAFFWAIGVSVTEGYGLTETAPVVSVRPLGHPVFGTIGKPLSCTKVKIVD 439
Query: 312 AETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRS 371
NE LPAG G V +RG+ VM+GY+K T +D+DGW ++GD+G
Sbjct: 440 DSGNE-LPAGKLGTVMIRGTSVMKGYYKRQDLTDAVIDKDGWFDSGDLGM---------- 488
Query: 372 RRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPD 431
+ G L+L GR KDTIVL GEN+EP+ +E S I Q VV+GQDQR GA+IV D
Sbjct: 489 KTIDGELILRGRKKDTIVLRGGENIEPVPIEMKLQESPFIAQAVVLGQDQRFLGALIVAD 548
Query: 432 KEEVLMAAKRLSIVHADASELSKEKTISLLY 462
+ EV A I A EL + I L+
Sbjct: 549 EAEVKNYAAEQGISAASFEELLAKPEIKKLF 579
>gi|408794555|ref|ZP_11206160.1| AMP-binding enzyme [Leptospira meyeri serovar Hardjo str. Went 5]
gi|408461790|gb|EKJ85520.1| AMP-binding enzyme [Leptospira meyeri serovar Hardjo str. Went 5]
Length = 644
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 172/482 (35%), Positives = 263/482 (54%), Gaps = 39/482 (8%)
Query: 29 EIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI 88
++I+ G+E R S + R + I DD+ T +YTSGTTG PKGVML H N++HQ
Sbjct: 150 DLIEKGKELRAKGSKKAEER----MKAIAPDDLFTIIYTSGTTGMPKGVMLKHSNMIHQT 205
Query: 89 RS-LYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHY 147
L ++ + ++ LS+LP WHV+ER Y + G YT VR+L+DD+++ +P +
Sbjct: 206 SVILGSMIEIKQDERMLSILPVWHVFERVFEYLAIAAGCATYYTNVRDLRDDMKKAKPTF 265
Query: 148 MISVPLVYETLYSGIQKQIF---TSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQK 204
M S P ++E++Y+GI +I + A RR + S + A R +G + +
Sbjct: 266 MASAPRLWESIYNGIYTRINDPKQTPALRRGLFNLAYFFSKHFNAATRFLKGNQVDYVGR 325
Query: 205 QPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDL 263
P +V+L + + IL + L + +V KI+ A G KA VSGGG+L H+D
Sbjct: 326 NP--IVSLFKGFYYLTVAIILAVPYFLLDLVVLSKIREATGGELKASVSGGGALQRHVDA 383
Query: 264 FYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVD--------AETN 315
F+ IG+ V GYG+TE+SPVI+ R V GSVG T ++I D + N
Sbjct: 384 FFNDIGINVLEGYGMTETSPVISVRTFKKLVQGSVGVITPETSVQIRDDLGKVLTHVDAN 443
Query: 316 EVLPAG---SKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSR 372
+ L +G ++G++ +RG QVM+GY+KNP T + L +DGW++TGDIG +
Sbjct: 444 QKLISGKYGARGVIHIRGPQVMKGYYKNPETTAKVL-KDGWMDTGDIGMFNFKKT----- 497
Query: 373 RCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDK 432
L + GRAKDT+VL GENVEP+ +E+ S I Q++VIGQDQ+ GA++VPD
Sbjct: 498 -----LTITGRAKDTVVLLGGENVEPVPIEDKLTESPYIAQVMVIGQDQKNLGALVVPDF 552
Query: 433 EEVLMAAKRLSIVHADASEL-SKEKTISLLYGELRKW-TSKCSF----QIGPIHVVDEPF 486
+++ AK I D +L K + E++ +K F Q+ P ++ + F
Sbjct: 553 DKLTEWAKENGISETDKQKLIENPKVLDFYKKEIKALNNTKTGFKSFEQVTPFILITKSF 612
Query: 487 TV 488
V
Sbjct: 613 EV 614
>gi|224531965|ref|ZP_03672597.1| long-chain-fatty-acid CoA ligase [Borrelia valaisiana VS116]
gi|224511430|gb|EEF81836.1| long-chain-fatty-acid CoA ligase [Borrelia valaisiana VS116]
Length = 645
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 164/447 (36%), Positives = 256/447 (57%), Gaps = 22/447 (4%)
Query: 22 IPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTH 81
I VFSY ++++LG E KA S D + E S+DIAT +YTSGTTG PKGVML H
Sbjct: 150 ITVFSYKKLLELGAEYLKANPKSFDM----EIEKGSSEDIATIIYTSGTTGMPKGVMLRH 205
Query: 82 KNLLHQIRSLYDIVPA-ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN--LKD 138
++ + Q+ LYD +P + G +S+LP WH +ERAC Y + +GI + Y L
Sbjct: 206 ESFIFQLDRLYDYLPTLKPGKIMISILPLWHSFERACEYIVALKGIAIAYXKPIGPVLLK 265
Query: 139 DLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFC 198
D P +ISVP ++E + GI K++ + S ++++ ++ Y FK + GF
Sbjct: 266 DFLLLNPQMIISVPRIWEGIRIGIIKKV-SESLIKKLMFGGFLKTGIVYEKFKEKFLGFS 324
Query: 199 LTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSL 257
K+ + + L L+ +++P+ LL + LV+KKI++A+G + + GVSGGG+L
Sbjct: 325 PV--YKKSNLFIVLFSKLFLFGGIILIFPVKLLGDILVFKKIKNALGKNFEFGVSGGGAL 382
Query: 258 PMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEV 317
++D F++A+G+KV GYGLTE+ P+++ RR V +VG + E K+V + EV
Sbjct: 383 VDYVDYFFKAVGIKVLEGYGLTETGPILSVRRLKGPVARTVGPILPDVEYKVVGID-GEV 441
Query: 318 LPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGV 377
L G KG + VR Q+M GYFK+ + T + L EDGW NTGD+ + ++
Sbjct: 442 LSYGEKGELWVRSPQIMSGYFKDKAKTNEVLTEDGWFNTGDLVKLTINNE---------- 491
Query: 378 LVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLM 437
+ + GR+KDTIVL GEN+EP LE +S I I+++GQDQ+ GA+IVP+ + +
Sbjct: 492 ISIVGRSKDTIVLRGGENIEPEPLERVLSKSLFIENIMIVGQDQKFLGAVIVPNFDNLEK 551
Query: 438 AAKRLSIVHADASELSKEKTISLLYGE 464
A + + +L + ++ LY +
Sbjct: 552 WANSSGVSFSSRDDLLINEEVNKLYSK 578
>gi|397645678|gb|EJK76946.1| hypothetical protein THAOC_01260 [Thalassiosira oceanica]
Length = 777
Score = 273 bits (698), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 162/434 (37%), Positives = 239/434 (55%), Gaps = 35/434 (8%)
Query: 43 DSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI------RSLYDIVP 96
DS + + + D++T VYTSGTTG PKGVML+H NLLHQ YD
Sbjct: 274 DSTSPAIYNELPPMAKSDLSTIVYTSGTTGKPKGVMLSHGNLLHQTGHRLAPTKPYDESE 333
Query: 97 AENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYE 156
G+ LS+LP WH+ ER F+ SRG ++++ +R K+DL +++P +++ VP V E
Sbjct: 334 PLPGELMLSLLPVWHITERTFELFMLSRGCYVVFSGIRWFKNDLAKHRPQWLVLVPRVLE 393
Query: 157 TLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWL 216
+ G+Q + S + + + + S +I G + + P D +
Sbjct: 394 KVALGVQDKFAAGSVVVKGLVKLFTKTSTLKNKHSKIRNGLVVGSDAPTP------FDGI 447
Query: 217 WARIICAILWPLHLLAEKLVYKKIQSAI-GISKAGVSGGGSLPMHIDLFYEAIGVKVQVG 275
+ +I L PL+ + KLV+ K+Q G K+ +SGG +L ++ FYE +G+ + VG
Sbjct: 448 VSSLIVKALAPLNFVGNKLVWSKVQDGFGGRQKSIISGGSALAGSLETFYENVGIDILVG 507
Query: 276 YGLTESSPVIAARRPTCNVL--GSVGHPINHTEIKIVDAETNE------VLPAGSKGIVK 327
YGLTE +P++A RR CN++ G VG P + TE+++VD E+ LP G G+V
Sbjct: 508 YGLTECAPLLAHRRSDCNLVTAGCVGFPCSDTELRVVDPESKAEDGERISLPIGQAGVVI 567
Query: 328 VRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDT 387
RG QVM+GY+KN AT A+D G+ +TGD+G I P G L+L GRAKDT
Sbjct: 568 GRGPQVMKGYYKNAEATSNAIDRFGFFDTGDLGRINP---------LTGDLILTGRAKDT 618
Query: 388 IVLSTGENVEPLELEEAAL-RSSLIRQIVVIGQDQRRPGAIIV--PDK--EEVLMAAKRL 442
IVLS GEN+EP +E+A L SSL+ Q+++ GQD R AI V P+ E L+ A RL
Sbjct: 619 IVLSNGENIEPQPIEDAILSHSSLVEQVMLSGQDGRSLLAITVLNPNALVEAGLLDASRL 678
Query: 443 SIVHADASELSKEK 456
+ D ++ K
Sbjct: 679 KAIMNDYDAVNNPK 692
>gi|429124895|ref|ZP_19185427.1| Long-chain acyl-CoA synthetases (AMP-forming) [Brachyspira
hampsonii 30446]
gi|426279278|gb|EKV56304.1| Long-chain acyl-CoA synthetases (AMP-forming) [Brachyspira
hampsonii 30446]
Length = 625
Score = 273 bits (698), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 171/476 (35%), Positives = 256/476 (53%), Gaps = 38/476 (7%)
Query: 24 VFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKN 83
++S+++ ++LG ES D A K K + ++ AT +YTSGTTG PKGV+LTH N
Sbjct: 145 IYSFEKFLELGEESLNG--DEEFAVK--KASKLTNESTATIIYTSGTTGKPKGVILTHGN 200
Query: 84 LLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRY 143
+LH IR L DI+ + G+K L++LP WH+YER Y G T R LK+D
Sbjct: 201 ILHNIRVLPDIIKLQPGEKLLTILPIWHIYERTISYVTAITGCFTAITNKRYLKNDFTEE 260
Query: 144 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCL---- 199
+P ISVP ++ +Y+ + K I R +A+ I+ S Y R
Sbjct: 261 KPDIFISVPAIWVNIYNTVMKNIDRKGTIARNLAKFFIKRSLKYIRSLRFQNDLVYLLGE 320
Query: 200 -TRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKI-QSAIGISKAGVSGGGSL 257
++ K+ Y + + D ++ H +A+K+VY KI + G + +SGGG+L
Sbjct: 321 ESKAHKKSEYSIGMFDPIY-----------HKMAKKMVYSKILELTGGKMRLTISGGGAL 369
Query: 258 PMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEV 317
PM+I+ F EA+G+ + VG+G+TE+SPV+ R P N G+ G PI +I+I D E N +
Sbjct: 370 PMYIEDFVEAVGINLVVGWGITETSPVVTLRSPYKNYRGTCGAPIPEVKIEIRDKEGN-I 428
Query: 318 LPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGV 377
G G+ ++G + + Y+K+P TKQA DG+ N+GD+G G
Sbjct: 429 CKDGVMGVCYIKGPNIFKEYYKDPELTKQA-KVDGFFNSGDLGAYTQQ----------GE 477
Query: 378 LVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLM 437
+VL GRAK+TIVL TGENVEP +E AL S I QI++IGQD+ GAIIV +KE +
Sbjct: 478 IVLTGRAKETIVLLTGENVEPQPIENKALESPYIYQIMLIGQDKASTGAIIVINKENIKE 537
Query: 438 AAKRLSIVHADASELSKEKTISLLYGELRKWTS-KCSFQ----IGPIHVVDEPFTV 488
+ I + + + S + L+ EL + K F+ I + + DE FT+
Sbjct: 538 YFDKHKISYDENTLSSSKDVYKLIREELDNLINYKNGFRPYEAIAKMIITDEEFTI 593
>gi|392401755|ref|YP_006438367.1| AMP-dependent synthetase and ligase [Turneriella parva DSM 21527]
gi|390609709|gb|AFM10861.1| AMP-dependent synthetase and ligase [Turneriella parva DSM 21527]
Length = 628
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 167/419 (39%), Positives = 245/419 (58%), Gaps = 27/419 (6%)
Query: 56 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYER 115
I DD+ T +YTSGTTG PKGVMLTH N++ QIR+L + D LS+LP WH++ER
Sbjct: 178 IKPDDLFTLIYTSGTTGAPKGVMLTHGNIISQIRNLP--LGFNRHDVMLSILPIWHIFER 235
Query: 116 ACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 175
A + G + +YT V++LK D+Q +P +M S P ++E++Y+GI ++ S +R
Sbjct: 236 AFEIISIASGAKTVYTNVKHLKADMQSVKPTFMASAPRLWESIYNGILTKVAEGSPIKRA 295
Query: 176 VARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWAR--IICAILWPLHLLAE 233
+ A I ++ Y R G L Q P + + + + +I A + P LL +
Sbjct: 296 LFHAAISVNHVYRQALREMRGQNL---QILPQNIFMRMAAILSSTLVIIATVVPA-LLLD 351
Query: 234 KLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTC 292
+V KI++A G +A +SGGG+LP+HID F+ IG+ V GYG+TE+SP+I+ R P
Sbjct: 352 AVVLSKIRAATGGRLRATISGGGALPLHIDEFFNDIGIAVLEGYGMTETSPIISVRLPEN 411
Query: 293 NVLGSVGHPINHTEIKIVDAETNEVL-PA----GSKGIVKVRGSQVMQGYFKNPSATKQA 347
V+GSVG + TEI++VD T + P G KG + V+G QVM GY+KNP AT +
Sbjct: 412 AVIGSVGPLYSETEIRLVDIATGATIYPGRDYFGRKGELHVKGPQVMAGYYKNPEATAKV 471
Query: 348 LDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALR 407
L ++GW+NTGD+ + G L + GR+K+TIVL GENVEP+ +E L
Sbjct: 472 L-KNGWMNTGDLAIMT----------ANGCLKIVGRSKETIVLMNGENVEPVPIESKLLE 520
Query: 408 SSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIV--HADASELSKEKTISLLYGE 464
S LI Q +V+GQDQ+ A+IVP E + L + +A+ +L K +T L+ GE
Sbjct: 521 SPLIEQCMVVGQDQKFLAALIVPRTEALKQFGTDLQTLAQNAEVKKLLKAETHRLISGE 579
>gi|434381721|ref|YP_006703504.1| AMP-dependent synthetase and ligase [Brachyspira pilosicoli WesB]
gi|404430370|emb|CCG56416.1| AMP-dependent synthetase and ligase [Brachyspira pilosicoli WesB]
Length = 628
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 170/478 (35%), Positives = 265/478 (55%), Gaps = 42/478 (8%)
Query: 24 VFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKN 83
++S+ + ++ G E+ D + A K K + +DD AT +YTSGTTG PKGV+LTH N
Sbjct: 150 IYSFSKFLEFGEEALNG--DKDFAVK--KASKLNNDDTATIIYTSGTTGKPKGVILTHGN 205
Query: 84 LLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRY 143
+LH +R L DI+ + G+K L++LP WH+YER Y G T R+LK+D
Sbjct: 206 ILHNVRVLPDIIKLQRGEKLLTVLPIWHIYERTISYVTAIFGCFTAITNKRDLKNDFVEE 265
Query: 144 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQ 203
+P ISVP ++ +Y+G+ K I AA +++ ++ I+ S Y RN
Sbjct: 266 KPDIFISVPAIWVNIYNGVMKNIDKKPAAVKMMVKSFIQGSIRY------------IRNL 313
Query: 204 KQPSYLVALI--DWLWARIICAILWPL----HLLAEKLVYKKIQSAIGIS-KAGVSGGGS 256
+ + +V L+ + ++ I + PL H +A+KLVYKKI+ G + +SGGG+
Sbjct: 314 RYQNNMVYLLGDEKKESKKIEYDILPLDPMSHKMAQKLVYKKIKELTGGRLRLTISGGGA 373
Query: 257 LPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNE 316
LPM+I+ F EA G+ + VG+G+TE++PV+ R P N G+ G P+ +I++ D N
Sbjct: 374 LPMYIEDFIEATGINLVVGWGITETAPVVTLRSPFKNYRGTCGAPVPEVQIEVRDKNGN- 432
Query: 317 VLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGG 376
+ G G+ ++G + + Y+K+ T+QA +DG+ N+GD+G G
Sbjct: 433 ICKDGELGVCYIKGPNIFKEYYKDKELTRQA-KKDGFFNSGDLGAYTKQ----------G 481
Query: 377 VLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVL 436
+VL GRAK+TIVL TGENVEP +E A+ S I QI+++GQD+ GAI+V DK+ V
Sbjct: 482 EIVLTGRAKETIVLLTGENVEPQPIENKAMESKYISQIMLVGQDKASTGAIVVIDKDNVK 541
Query: 437 MAAKRLSIVHADASELSKEK-TISLLYGEL-RKWTSKCSFQ----IGPIHVVDEPFTV 488
+ I H D + + K + L+ EL R SK F+ I + + + FT+
Sbjct: 542 EFLDKHKI-HYDENNMENSKDVVKLIKHELSRLVNSKNGFRPYETISKLIITSKDFTI 598
>gi|300871650|ref|YP_003786523.1| AMP-dependent synthetase and ligase [Brachyspira pilosicoli
95/1000]
gi|300689351|gb|ADK32022.1| AMP-dependent synthetase and ligase [Brachyspira pilosicoli
95/1000]
Length = 628
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 170/478 (35%), Positives = 265/478 (55%), Gaps = 42/478 (8%)
Query: 24 VFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKN 83
++S+ + ++ G E+ D + A K K + +DD AT +YTSGTTG PKGV+LTH N
Sbjct: 150 IYSFSKFLEFGEEALNG--DKDFAVK--KASKLNNDDTATIIYTSGTTGKPKGVILTHGN 205
Query: 84 LLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRY 143
+LH +R L DI+ + G+K L++LP WH+YER Y G T R+LK+D
Sbjct: 206 ILHNVRVLPDIIKLQRGEKLLTVLPIWHIYERTISYVTAIFGCFTAITNKRDLKNDFVEE 265
Query: 144 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQ 203
+P ISVP ++ +Y+G+ K I AA +++ ++ I+ S Y RN
Sbjct: 266 KPDIFISVPAIWVNIYNGVMKNIDKKPAAVKMMVKSFIQGSVRY------------IRNL 313
Query: 204 KQPSYLVALI--DWLWARIICAILWPL----HLLAEKLVYKKIQSAIGIS-KAGVSGGGS 256
+ + +V L+ + ++ I + PL H +A+KLVYKKI+ G + +SGGG+
Sbjct: 314 RYQNNMVYLLGDEKKESKKIEYDILPLDPMSHKMAQKLVYKKIKELTGGRLRLTISGGGA 373
Query: 257 LPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNE 316
LPM+I+ F EA G+ + VG+G+TE++PV+ R P N G+ G P+ +I++ D N
Sbjct: 374 LPMYIEDFIEATGINLVVGWGITETAPVVTLRSPFKNYRGTCGAPVPEVQIEVRDKNGN- 432
Query: 317 VLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGG 376
+ G G+ ++G + + Y+K+ T+QA +DG+ N+GD+G G
Sbjct: 433 ICKDGELGVCYIKGPNIFKEYYKDKELTRQA-KKDGFFNSGDLGAYTKQ----------G 481
Query: 377 VLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVL 436
+VL GRAK+TIVL TGENVEP +E A+ S I QI+++GQD+ GAI+V DK+ V
Sbjct: 482 EIVLTGRAKETIVLLTGENVEPQPIENKAMESKYISQIMLVGQDKASTGAIVVIDKDNVK 541
Query: 437 MAAKRLSIVHADASELSKEK-TISLLYGEL-RKWTSKCSFQ----IGPIHVVDEPFTV 488
+ I H D + + K + L+ EL R SK F+ I + + + FT+
Sbjct: 542 EFLDKHKI-HYDENNMENSKDVVKLIKHELSRLVNSKNGFRPYETISKLIITSKDFTI 598
>gi|384208744|ref|YP_005594464.1| long-chain acyl-CoA synthetase [Brachyspira intermedia PWS/A]
gi|343386394|gb|AEM21884.1| Long-chain acyl-CoA synthetases (AMP-forming) [Brachyspira
intermedia PWS/A]
Length = 625
Score = 272 bits (695), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 167/476 (35%), Positives = 257/476 (53%), Gaps = 38/476 (7%)
Query: 24 VFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKN 83
++S+++ ++LG ES D A K K + ++ AT +YTSGTTG PKGV+LTH N
Sbjct: 145 IYSFEKFLELGEESLNG--DEEFAIK--KASKLTNESTATIIYTSGTTGKPKGVILTHGN 200
Query: 84 LLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRY 143
+LH +R L DI+ + G+K L++LP WH+YER Y G T R LK+D
Sbjct: 201 ILHNVRVLPDIIKLQPGEKLLTILPIWHIYERTISYVTAIIGCFTAITNKRYLKNDFTEE 260
Query: 144 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLT--- 200
+P ISVP ++ +Y+ + K I S R +A+ LI+ S Y R
Sbjct: 261 RPDIFISVPAIWVNIYNTVMKNIDRKSTFARNLAKFLIKRSIKYIRSVRFQNDLVYLLGD 320
Query: 201 --RNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAI-GISKAGVSGGGSL 257
++ K+ Y + + D ++ H +A K+VY KI+ G + +SGGG+L
Sbjct: 321 EHKSDKKSEYSIGIFDPIY-----------HKMATKMVYSKIKELTGGKMRLTISGGGAL 369
Query: 258 PMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEV 317
PM+I+ F EA+G+ + VG+G+TE++PV+ R P N G+ G P+ +I++ D E N +
Sbjct: 370 PMYIEDFIEAVGINLVVGWGITETAPVVTLRSPFKNYRGTCGAPVPEVKIEVRDKEGN-I 428
Query: 318 LPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGV 377
G G+ ++G + + Y+K+P TKQA DG+ N+GD+G G
Sbjct: 429 CKDGVMGVCYIKGPNIFKEYYKDPELTKQA-KVDGFFNSGDLGTYTQQ----------GE 477
Query: 378 LVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLM 437
+VL GRAK+TIVL TGENVEP +E AL S I QI+++GQD+ GAIIV +KE +
Sbjct: 478 IVLTGRAKETIVLLTGENVEPQPIENKALESPYISQIMLVGQDKASTGAIIVINKENIKE 537
Query: 438 AAKRLSIVHADASELSKEKTISLLYGELRKWTS-KCSFQ----IGPIHVVDEPFTV 488
+ I + + + S + L+ EL + + F+ I + + DE FT+
Sbjct: 538 HFDKQKISYDEKTLASSKDVYKLMREELDNLINYRNGFRPYEAIAKMIITDEEFTI 593
>gi|431807605|ref|YP_007234503.1| AMP-dependent synthetase and ligase [Brachyspira pilosicoli
P43/6/78]
gi|430780964|gb|AGA66248.1| AMP-dependent synthetase and ligase [Brachyspira pilosicoli
P43/6/78]
Length = 623
Score = 272 bits (695), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 170/478 (35%), Positives = 265/478 (55%), Gaps = 42/478 (8%)
Query: 24 VFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKN 83
++S+ + ++ G E+ D + A K K + +DD AT +YTSGTTG PKGV+LTH N
Sbjct: 145 IYSFSKFLEFGEEALNG--DKDFAVK--KASKLNNDDTATIIYTSGTTGKPKGVILTHGN 200
Query: 84 LLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRY 143
+LH +R L DI+ + G+K L++LP WH+YER Y G T R+LK+D
Sbjct: 201 ILHNVRVLPDIIKLQRGEKLLTVLPIWHIYERTISYVTAIFGCFTAITNKRDLKNDFVEE 260
Query: 144 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQ 203
+P ISVP ++ +Y+G+ K I AA +++ ++ I+ S Y RN
Sbjct: 261 KPDIFISVPAIWVNIYNGVMKNIDKKPAAVKMMVKSFIQGSVRY------------IRNL 308
Query: 204 KQPSYLVALI--DWLWARIICAILWPL----HLLAEKLVYKKIQSAIGIS-KAGVSGGGS 256
+ + +V L+ + ++ I + PL H +A+KLVYKKI+ G + +SGGG+
Sbjct: 309 RYQNNMVYLLGDEKKESKKIEYDILPLDPMSHKMAQKLVYKKIKELTGGRLRLTISGGGA 368
Query: 257 LPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNE 316
LPM+I+ F EA G+ + VG+G+TE++PV+ R P N G+ G P+ +I++ D N
Sbjct: 369 LPMYIEDFIEATGINLVVGWGITETAPVVTLRSPFKNYRGTCGAPVPEVQIEVRDKNGN- 427
Query: 317 VLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGG 376
+ G G+ ++G + + Y+K+ T+QA +DG+ N+GD+G G
Sbjct: 428 ICKDGELGVCYIKGPNIFKEYYKDKELTRQA-KKDGFFNSGDLGAYTKQ----------G 476
Query: 377 VLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVL 436
+VL GRAK+TIVL TGENVEP +E A+ S I QI+++GQD+ GAI+V DK+ V
Sbjct: 477 EIVLTGRAKETIVLLTGENVEPQPIENKAMESKYISQIMLVGQDKASTGAIVVIDKDNVK 536
Query: 437 MAAKRLSIVHADASELSKEK-TISLLYGEL-RKWTSKCSFQ----IGPIHVVDEPFTV 488
+ I H D + + K + L+ EL R SK F+ I + + + FT+
Sbjct: 537 EFLDKHKI-HYDENNMENSKDVVKLIKHELSRLVNSKNGFRPYETISKLIITSKDFTI 593
>gi|387827494|ref|YP_005806776.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi N40]
gi|312149046|gb|ADQ29117.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi N40]
Length = 645
Score = 271 bits (694), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 170/480 (35%), Positives = 273/480 (56%), Gaps = 28/480 (5%)
Query: 19 VEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVM 78
+ I VFSY ++++LG E +A S D + E S DIAT +YTSGTTG PKGVM
Sbjct: 147 IGNITVFSYKKLLELGTEYLRANPKSFDM----EIEKGSSKDIATIIYTSGTTGMPKGVM 202
Query: 79 LTHKNLLHQIRSLYDIVPA-ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN-- 135
L H++ + Q+ LYD +P + G +S+LP WH +ERAC Y + +GI + Y+
Sbjct: 203 LRHESFIFQLDRLYDYLPTLKPGKIMISILPLWHSFERACEYIVALKGIAIAYSKPIGPV 262
Query: 136 LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYE 195
L D P ++SVP ++E + GI K++ + S ++ V +++ Y K +
Sbjct: 263 LLKDFLLLNPQMIVSVPRIWEGIRIGIIKKV-SESFIKKFVFGGFLKVGIIYAKLKERFL 321
Query: 196 GFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGG 254
G L+ K+ ++L++L L+ I +++P+ LL + LV+KKI++A+G + + GVSGG
Sbjct: 322 G--LSPIYKKTNFLISLFSKLFLFIGIVLIFPIKLLGDILVFKKIKNALGQNFEFGVSGG 379
Query: 255 GSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAET 314
G+L ++D F++A+G+KV GYGLTE+ P+++ RR V +VG + E K+V +
Sbjct: 380 GALVDYVDYFFKAVGIKVLEGYGLTETGPILSVRRLKGPVAKTVGPILPDVEYKVVGID- 438
Query: 315 NEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRC 374
VL G KG + VR Q+M GYFK+ + T + L EDGW NTGD+ + ++
Sbjct: 439 GRVLSYGEKGELWVRSPQIMSGYFKDRAKTSEVLTEDGWFNTGDLVRLTINNE------- 491
Query: 375 GGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEE 434
+ + GR+KDTIVL GEN+EP LE +S I I+++GQDQ+ GA+I P+ +
Sbjct: 492 ---ISIVGRSKDTIVLRGGENIEPEPLERVLGKSLFIENIMIVGQDQKFLGAVIAPNFDN 548
Query: 435 VLMAAKRLSIVHADASELSKEKTISLLYGELRKWT--SKCSF----QIGPIHVVDEPFTV 488
+ A + + S+L + ++ LY + T +K F +I ++ +PFT+
Sbjct: 549 LEKWANSSGVSFSSRSDLLANEDVNKLYSKHISDTINTKLGFKNFEKIVGFVLLQDPFTI 608
>gi|183221263|ref|YP_001839259.1| long-chain acyl-CoA synthetase [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
gi|189911354|ref|YP_001962909.1| long-chain-fatty-acid--CoA ligase [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167776030|gb|ABZ94331.1| Long-chain-fatty-acid--CoA ligase [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167779685|gb|ABZ97983.1| Long-chain acyl-CoA synthetase, AMP-forming [Leptospira biflexa
serovar Patoc strain 'Patoc 1 (Paris)']
Length = 624
Score = 271 bits (694), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 157/414 (37%), Positives = 248/414 (59%), Gaps = 27/414 (6%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 118
DD+ T +YTSGTTG PKGVMLTH+N+++ + + V ++ D+ LS+LP WH++ERA
Sbjct: 178 DDLFTIIYTSGTTGMPKGVMLTHQNMVYNVVKVPPRVGLKSTDRTLSILPVWHIFERAID 237
Query: 119 YFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 178
Y I + G + YT +R+L+DD Q+ +P +M S P ++E LY GI++++ + ++ +
Sbjct: 238 YAIITEGASIAYTNIRDLRDDFQKIKPSFMASAPRLWENLYLGIKQKLEKAPENKKKL-- 295
Query: 179 ALIRISFAYTAFKRIYEGF-CLTRNQ---KQPSYLVALIDWLWARIICAILWPLHLLAEK 234
FAY K+ +G L N+ K+ S + + + L+ L L +
Sbjct: 296 ----FDFAYDICKKFKDGQDYLAGNRLLTKEESPFERMKNTTVSIGYVLNLFLLAKLLDG 351
Query: 235 LVYKKIQSAIGISKAG-VSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCN 293
LV+ KI+ +G G +SGGG+LP H+D F+ IG+ V GYG+TE +P+I+ R
Sbjct: 352 LVFSKIRDVLGGHLTGTISGGGALPSHVDEFFNVIGIPVYEGYGMTECAPIISVRSVGHV 411
Query: 294 VLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGW 353
V GSVG T ++IV+ E E +P G G++ ++G QVM+GY+KN ATK+A+ DGW
Sbjct: 412 VQGSVGKWPEGTAVRIVN-EQGESVPKGKMGVIHIKGPQVMKGYYKNEEATKKAI-VDGW 469
Query: 354 LNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQ 413
+NTGD+G+I+ + + L + GR KDTIVL GENVEP+ +E L ++LI Q
Sbjct: 470 MNTGDLGFISFNDT----------LSVRGRVKDTIVLLGGENVEPVPIENLLLENALINQ 519
Query: 414 IVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRK 467
++V+GQDQ+ A++ PDKE + K + + + +L++ K + L Y + K
Sbjct: 520 VIVVGQDQKSLTALVWPDKERM----KEVGLQWKEGEDLNQNKDVRLYYQNIVK 569
>gi|404476437|ref|YP_006707868.1| AMP-dependent synthetase and ligase [Brachyspira pilosicoli B2904]
gi|404437926|gb|AFR71120.1| AMP-dependent synthetase and ligase [Brachyspira pilosicoli B2904]
Length = 628
Score = 271 bits (694), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 170/478 (35%), Positives = 264/478 (55%), Gaps = 42/478 (8%)
Query: 24 VFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKN 83
++S+ + ++ G E+ D + A K K + +DD AT +YTSGTTG PKGV+LTH N
Sbjct: 150 IYSFSKFLEFGEEALNG--DKDFAVK--KASKLNNDDTATIIYTSGTTGKPKGVILTHGN 205
Query: 84 LLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRY 143
+LH +R L DI+ + G+K L++LP WH+YER Y G T R+LK+D
Sbjct: 206 ILHNVRVLPDIIKLQRGEKLLTVLPIWHIYERTISYVTAIFGCFTAITNKRDLKNDFVEE 265
Query: 144 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQ 203
+P ISVP ++ +Y+G+ K I AA +++ ++ I+ S Y RN
Sbjct: 266 KPDIFISVPAIWVNIYNGVMKNIDKKPAAVKMMVKSFIQGSIRY------------IRNL 313
Query: 204 KQPSYLVALI--DWLWARIICAILWPL----HLLAEKLVYKKIQSAIGIS-KAGVSGGGS 256
+ + +V L+ + ++ I + PL H +A+KLVYKKI+ G + +SGGG+
Sbjct: 314 RYQNNMVYLLGDEKKESKKIEYDILPLDPMSHKMAQKLVYKKIKELTGGRLRLTISGGGA 373
Query: 257 LPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNE 316
LPM+I+ F EA G+ + VG+G+TE++PV+ R P N G+ G P+ +I++ D N
Sbjct: 374 LPMYIEDFIEATGINLVVGWGITETAPVVTLRSPFKNYRGTCGAPVPEVQIEVRDKNGN- 432
Query: 317 VLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGG 376
+ G G+ ++G + + Y+K+ T+QA +DG N+GD+G G
Sbjct: 433 ICKDGELGVCYIKGPNIFKEYYKDKELTRQA-KKDGLFNSGDLGAYTKQ----------G 481
Query: 377 VLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVL 436
+VL GRAK+TIVL TGENVEP +E A+ S I QI+++GQD+ GAI+V DK+ V
Sbjct: 482 EIVLTGRAKETIVLLTGENVEPQPIENKAMESKYISQIMLVGQDKASTGAIVVIDKDNVK 541
Query: 437 MAAKRLSIVHADASELSKEK-TISLLYGEL-RKWTSKCSFQ----IGPIHVVDEPFTV 488
+ I H D + + K + L+ EL R SK F+ I + + + FT+
Sbjct: 542 EFLDKHKI-HYDENNMENSKDVVKLIKHELSRLVNSKNGFRPYETISKLIITSKDFTI 598
>gi|296125112|ref|YP_003632364.1| AMP-dependent synthetase/ligase [Brachyspira murdochii DSM 12563]
gi|296016928|gb|ADG70165.1| AMP-dependent synthetase and ligase [Brachyspira murdochii DSM
12563]
Length = 625
Score = 271 bits (693), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 170/479 (35%), Positives = 258/479 (53%), Gaps = 38/479 (7%)
Query: 21 EIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLT 80
E ++++D+ +LG E K D A K K + ++ IAT +YTSGTTG PKGV+LT
Sbjct: 142 ENNIYAFDKFEELGEEHLKG--DEEFAVK--KAAKLTNESIATIIYTSGTTGKPKGVILT 197
Query: 81 HKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDL 140
H N+LH +R L DI+ + G+K L++LP WH+YER Y G T R LK+D
Sbjct: 198 HGNILHNVRVLPDIIKLKAGEKLLTILPIWHIYERTISYVTAIIGCFTAITNKRYLKNDF 257
Query: 141 QRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCL- 199
+P ISVP ++ +Y+ + K I +A + + +I+ S +Y R
Sbjct: 258 TEEKPDIFISVPAIWVNIYNTVMKNIDRKNAFLKKFIKFIIKRSISYIRSVRYQNDLVYL 317
Query: 200 ----TRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGG 254
R K+ Y + + D L+ H +A+K+VY KI G + +SGG
Sbjct: 318 IGDEKREDKKAEYSIGMFDPLF-----------HKMAKKMVYSKIMELTGGKIRLTISGG 366
Query: 255 GSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAET 314
G+LPM+I+ F EA+G+ + VG+G+TE+SPV+ R P N G+ G PI +I+I D +
Sbjct: 367 GALPMYIEDFVEAVGINLVVGWGITETSPVVTLRSPYKNYRGTCGAPIPEVKIEIRDKDG 426
Query: 315 NEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRC 374
N G G+ ++G + + Y+K+P T QA DG+ N+GD+G
Sbjct: 427 NSC-KDGVMGVCWIKGPNIFKEYYKDPELTAQA-KIDGFFNSGDLGTYTQE--------- 475
Query: 375 GGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEE 434
G +VL GRAK+TIVL TGENVEP +E A+ SS I QI+++GQD+ GAI+V +KE
Sbjct: 476 -GEIVLTGRAKETIVLLTGENVEPQPIENKAMESSYISQIMLVGQDKASTGAIVVINKEN 534
Query: 435 VLMAAKRLSIVHADASELSKEKTISLLYGELRKWTS-KCSFQ----IGPIHVVDEPFTV 488
+ + I + + + S ++ L+ EL + + K F+ I I + DE FT+
Sbjct: 535 IKYYFDKEKIAYDEKNLASSKEVYKLIREELDRLINYKNGFRPYEAIAKIIITDEEFTI 593
>gi|256829470|ref|YP_003158198.1| AMP-dependent synthetase and ligase [Desulfomicrobium baculatum DSM
4028]
gi|256578646|gb|ACU89782.1| AMP-dependent synthetase and ligase [Desulfomicrobium baculatum DSM
4028]
Length = 629
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 154/446 (34%), Positives = 255/446 (57%), Gaps = 28/446 (6%)
Query: 54 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 113
++I +D+ T +YTSGTTG PKGVML H N++H +R+L ++ ++ D ++S+LP WH++
Sbjct: 173 DSISPEDVLTIIYTSGTTGTPKGVMLDHSNIMHNVRTLPPLIRLQSDDVWVSILPTWHIF 232
Query: 114 ERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 173
ER Y + G L+Y+++R DL+ Y+P + +VP ++E+LYS I + +
Sbjct: 233 ERTAEYIGIANGSCLVYSSIRTFAADLESYKPTLVATVPRIWESLYSKITTGLKKKDPKK 292
Query: 174 RVVARALIRISFAYTAFKRIYEGFCLTRNQ----KQPSYLVALIDWLWARIICAILWPLH 229
+ L+R+S AY R+ R+Q ++ S V D + A + L+ +
Sbjct: 293 AKIFNLLVRVSAAYRRNARVL------RDQLPVFQKKSLPVRFADKVQALVSNIFLFLPN 346
Query: 230 LLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARR 289
LLA+K + + G K +SGGGSLP ++D + +AIG+++ YG+TE SP IA R
Sbjct: 347 LLAKKKLVLVQEKFGGRLKGAISGGGSLPPYLDEWIDAIGIRIINAYGMTECSPGIAGRG 406
Query: 290 PTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALD 349
C+V G++G P+ TE++IV+ + E +P G +G ++VRG+QV +GY+KN A A
Sbjct: 407 FNCDVFGTIGPPVGETELRIVN-DQGEPVPNGIEGEIQVRGAQVFKGYYKNDEANAGAFT 465
Query: 350 EDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSS 409
DG+L TGD+G + G LV+ GRAK+ IVL++GENV+P +E
Sbjct: 466 SDGFLRTGDLGRLT----------LTGELVITGRAKEIIVLASGENVDPTNIEATLSMFP 515
Query: 410 LIRQIVVIGQDQRRPGAIIVPDKEEV--LMAAKRLSIVHADASELSKEKTISLLYGELRK 467
++ V++GQD++ GA+IVPD E++ + K ++ L ++ + L E+ K
Sbjct: 516 FVQDAVLVGQDKKGLGALIVPDLEKLREFVLEKYNQVLEETEGALRDKQLLDRLREEMNK 575
Query: 468 -WTSKCSF----QIGPIHVVDEPFTV 488
+K F ++ IH +D+ FT+
Sbjct: 576 LLNAKKGFKPYEKLQNIHFLDKEFTL 601
>gi|456864747|gb|EMF83139.1| AMP-binding enzyme [Leptospira weilii serovar Topaz str. LT2116]
Length = 683
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 187/520 (35%), Positives = 261/520 (50%), Gaps = 75/520 (14%)
Query: 29 EIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI 88
+I DL E KA + + E I +D+ T +YTSGTTG PKGVMLTH N++HQ
Sbjct: 149 KIYDLVEEG-KALRAKGSRKAEKRIEDIKPEDLFTLIYTSGTTGMPKGVMLTHSNMVHQ- 206
Query: 89 RSLYDIVPA-----ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRY 143
+ +VP + D LS+LP WH++ER Y SRGI+ YT V +LK+DL +
Sbjct: 207 --MVHVVPMLLTDIKTTDSMLSILPIWHIFERVNEYGAISRGIQTYYTKVSDLKNDLTKA 264
Query: 144 QPHYMISVPLVYETLYSGIQKQIF---TSSAARRVVARALIRISFAYTAFKRIYEGFCLT 200
+P +M S P V+E +Y+ I ++ + R+ + + S Y A +R G +
Sbjct: 265 KPSFMGSAPRVWENVYTNIYNKVNDPKQTPPLRKFLFKLAYFFSKHYNASRRFLSGLEVD 324
Query: 201 RNQKQ----------------------------------PSYLVALIDWLWARIICAILW 226
+ P+Y + L W + I L
Sbjct: 325 YENRNILKSIAIGTKSLIVLLLTGPFTLSAMTILAYLALPTYGIRLPSWFFLMIAGLGLI 384
Query: 227 PLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVI 285
+ +V KI++A G KA +SGGG+L H+D F+ IG+ V GYG+TE+SPVI
Sbjct: 385 FNAKTLDAVVLSKIRAATGGRLKASLSGGGALQSHVDNFFNDIGMLVLEGYGMTETSPVI 444
Query: 286 AARRPTCNVLGSVGHPINHTEIKIVDAETN---------EVLPA--GSKGIVKVRGSQVM 334
+ R ++GSVG + +E+ I D N EVL G KGIV V+G QVM
Sbjct: 445 SVRPFAKPIIGSVGFLVPKSELMIKDENGNVLTHINDKFEVLAGKLGQKGIVFVKGPQVM 504
Query: 335 QGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGE 394
+GY+KNP TK+ + DGW+NTGDIG+I L L GRAKDT+VL GE
Sbjct: 505 KGYYKNPEVTKKTI-VDGWMNTGDIGFI----------NFKKTLTLTGRAKDTVVLLGGE 553
Query: 395 NVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK 454
NVEP+ +E S I+Q +VIGQD++ GAIIVPD E + + K I + EL K
Sbjct: 554 NVEPVPIENKMDESPFIKQSMVIGQDKKVLGAIIVPDMEHLTLWCKENGIDSSKIDELIK 613
Query: 455 E-KTISLLYGELRKWTS-KCSF----QIGPIHVVDEPFTV 488
K I E+R + S K F Q+ I + +PF V
Sbjct: 614 NPKVIEFYKKEVRNYNSTKTGFKSFEQVQHIILTKKPFEV 653
>gi|384108995|ref|ZP_10009881.1| Long-chain acyl-CoA synthetase (AMP-forming) [Treponema sp. JC4]
gi|383869439|gb|EID85052.1| Long-chain acyl-CoA synthetase (AMP-forming) [Treponema sp. JC4]
Length = 643
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 158/479 (32%), Positives = 269/479 (56%), Gaps = 33/479 (6%)
Query: 21 EIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLT 80
E+ ++++ ++++ G++ R D +A + E +D+AT ++TSGTTG PKGVMLT
Sbjct: 156 EVELYTFTQLVNSGKKWRVEHKDEIEA----EVEKGTGEDLATIIFTSGTTGTPKGVMLT 211
Query: 81 HKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN--LKD 138
HKN L Q+ + + + GD+ LS+LP WHV+ER Y I +G + Y+ L
Sbjct: 212 HKNFLAQLDEIPERIYINPGDRALSVLPVWHVFEREVEYVILIQGGAICYSKPIGSILLA 271
Query: 139 DLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKR--IYEG 196
D ++ PH + +VP V+E +Y G+ K++ + + + ++ + A +R +
Sbjct: 272 DFKKLNPHLLPAVPRVFEAVYDGVTKKMRKTGGLVLKLFNFFVGVAKIHKAMQRKMFNQN 331
Query: 197 FCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGG 255
C T + +++ ++ W +++WPL+ L + L+++KI+ +G + + G++GGG
Sbjct: 332 PCFTAYRPVLWWILFILPW-------SLMWPLYWLGDLLIFRKIKVMLGSNFRVGIAGGG 384
Query: 256 SLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETN 315
+ P +ID F+ AIGV++ GYGLTE++P++A R + ++G PI + +IVD +
Sbjct: 385 AYPKNIDEFFWAIGVEIVEGYGLTETAPIVAVRPIAAPIYRTIGSPIRGVQARIVDMD-G 443
Query: 316 EVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCG 375
VL G +GI++++G VM+GY+K P T++ + DGWL+TGD+ H+
Sbjct: 444 YVLERGQQGILQIKGPTVMKGYYKRPDLTEKVMTVDGWLDTGDLAVFTIHNE-------- 495
Query: 376 GVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 435
L ++GR KDTIVL GEN+EPL +E S I+Q VV+GQD+R A+I+ D++E+
Sbjct: 496 --LQIKGRIKDTIVLRGGENLEPLPIEMKLSESRFIKQAVVLGQDKRYLAALILVDEDEI 553
Query: 436 LMAAKRLSIVHADASELSKEKTISLLY-GELRKW-TSKCSFQ----IGPIHVVDEPFTV 488
A I + L I LY GE+ +SK F+ I ++ +PF V
Sbjct: 554 KNYAAENGIQYDTYENLLASNGIQSLYEGEIANLISSKNGFKMFERINKFTLITKPFEV 612
>gi|359689644|ref|ZP_09259645.1| long-chain-fatty-acid CoA ligase [Leptospira licerasiae serovar
Varillal str. MMD0835]
gi|418749983|ref|ZP_13306271.1| AMP-binding enzyme domain protein [Leptospira licerasiae str.
MMD4847]
gi|418759344|ref|ZP_13315524.1| AMP-binding enzyme [Leptospira licerasiae serovar Varillal str. VAR
010]
gi|384113835|gb|EIE00100.1| AMP-binding enzyme [Leptospira licerasiae serovar Varillal str. VAR
010]
gi|404274868|gb|EJZ42186.1| AMP-binding enzyme domain protein [Leptospira licerasiae str.
MMD4847]
Length = 679
Score = 268 bits (686), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 185/541 (34%), Positives = 276/541 (51%), Gaps = 92/541 (17%)
Query: 11 KSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGT 70
K S AP +++ YD I E K+ S + + I +D+ T +YTSGT
Sbjct: 138 KESEAPGVLK-----MYDLI-----EKGKSLRASGSRKVEDRVAAIKPEDLFTLIYTSGT 187
Query: 71 TGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMY 130
TG PKGV L H N++HQ+ ++ ++ K LS+LP WHV+ER Y S G Y
Sbjct: 188 TGLPKGVQLRHSNMMHQVLNVTPMLKINAEAKLLSILPVWHVFERVVEYVCISIGAATYY 247
Query: 131 TAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAF 190
T VR+L+ DL +P +M S P ++E +Y+GI +I + + R L ++++ ++
Sbjct: 248 TNVRDLRQDLATVKPTFMGSAPRLWENIYNGIYTRI-NDPSQTPAIRRGLFKLAYFFSDK 306
Query: 191 KRI-----------YEG----------------------FCLTRNQKQPSYLVALIDWLW 217
K Y G F LT +YL+A ++
Sbjct: 307 KNAAVRFITGKEVDYHGRNPIFSFFYGILMLFQLVLTGPFTLTVISSIAAYLLASTEF-- 364
Query: 218 ARIICAILWPLHLLA-----------EKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFY 265
++ PL+++A +K+V KI++A G +A +SGGG+LP H+D F+
Sbjct: 365 ----SSLSLPLYIIAGLGVFFNSATLDKIVLSKIRTATGGRLRASISGGGALPRHVDEFF 420
Query: 266 EAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA----- 320
IG+ V GYG+TE+SPV++ R ++GSVG + T ++I + + NEVL
Sbjct: 421 NNIGINVLEGYGMTETSPVLSVRTFQKLIIGSVGSIVPKTNLQIRN-DNNEVLTEVDENG 479
Query: 321 -------GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRR 373
G KG+V V+G QVM+GYFKN AT +AL DGW+NTGD+G I H+
Sbjct: 480 KVIKGRLGRKGVVFVKGPQVMKGYFKNDEATSKAL-VDGWMNTGDMGMINFKHT------ 532
Query: 374 CGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 433
L L GRAKDT+VL GENVEP+ +E S+ I Q +VIGQDQ+ GAII+PD +
Sbjct: 533 ----LTLTGRAKDTVVLLGGENVEPVPIENKLQESAYISQCMVIGQDQKNLGAIIIPDFD 588
Query: 434 EVLMAAKRLSIVHADASEL-SKEKTISLLYGELRKW-TSKCSF----QIGPIHVVDEPFT 487
++ AK + ++ L K + L E++ SK F Q+ P +V +PF
Sbjct: 589 KLEEWAKENGVDTSNKDALIENPKVVDLYRKEIKALNNSKNGFKSFEQVNPFFLVSKPFE 648
Query: 488 V 488
V
Sbjct: 649 V 649
>gi|390940643|ref|YP_006404380.1| AMP-forming long-chain acyl-CoA synthetase [Sulfurospirillum
barnesii SES-3]
gi|390193750|gb|AFL68805.1| AMP-forming long-chain acyl-CoA synthetase [Sulfurospirillum
barnesii SES-3]
Length = 629
Score = 268 bits (686), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 153/474 (32%), Positives = 264/474 (55%), Gaps = 29/474 (6%)
Query: 24 VFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKN 83
++SY +I+ + R +D +A + E + ++DI T +YTSGTTG PKGV L+H+N
Sbjct: 148 LYSYQDIL----KDRAIHTDEIEAFIQSQ-EALDAEDIVTIIYTSGTTGTPKGVPLSHEN 202
Query: 84 LLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRY 143
+++ +R + ++ ++ D ++S+LP WH++ERA Y SRG +Y++++ DL++Y
Sbjct: 203 IMYNVREIPPLIALQSTDMWVSILPSWHIFERAAEYVALSRGCCTVYSSIKTFAADLEQY 262
Query: 144 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIY--EGFCLTR 201
+P + +VP ++E++Y+ I + + A + + + LI IS AY KR+ E C
Sbjct: 263 KPTIVATVPRLWESMYTKINTTLEKTDAKKAKIFKKLIAISIAYKRAKRVIDDELPCF-- 320
Query: 202 NQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHI 261
K+PS+ V + + A + C L+P + +A+K + + G + VSGGG+LP +
Sbjct: 321 --KKPSFFVTCKEKIVAYLTCFFLYPFYSIAQKKLALVQEKFGGRLRLAVSGGGALPDFL 378
Query: 262 DLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAG 321
D + +AIG+++ YG++E +PVI+ R CN ++G P+ T +KIV E L AG
Sbjct: 379 DAWIDAIGIRIVNAYGMSECAPVISGRALQCNTFSTLGLPVKGTTLKIVTKE-GASLDAG 437
Query: 322 SKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLE 381
G + V+G QVM GY+ NP ++ EDG+ TGD+G + G L++
Sbjct: 438 EIGEIWVKGEQVMHGYYNNPEENAKSFSEDGFFKTGDLGKLT----------LKGELIIT 487
Query: 382 GRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV--LMAA 439
GR+K+ IVL+ GENV+P +E I +++G ++ GA+IVPD E++ +A
Sbjct: 488 GRSKEIIVLANGENVDPSRIESTLSMLPFISDAILVGHTKKGLGALIVPDFEKLKEYVAV 547
Query: 440 KRLSIVHADASELSKEKTISLLYGEL-----RKWTSKCSFQIGPIHVVDEPFTV 488
+VH + + ++ L E+ +K K ++ IH +D+ FTV
Sbjct: 548 NFDKVVHTIEQVMEDQHIVAKLKSEMNAMLHQKEGFKPFEKLQNIHFLDQEFTV 601
>gi|339498933|ref|YP_004696968.1| Long-chain-fatty-acid--CoA ligase [Spirochaeta caldaria DSM 7334]
gi|338833282|gb|AEJ18460.1| Long-chain-fatty-acid--CoA ligase [Spirochaeta caldaria DSM 7334]
Length = 637
Score = 268 bits (685), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 154/408 (37%), Positives = 229/408 (56%), Gaps = 23/408 (5%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 118
DD+AT ++TSGTTG PKGVML+H N LHQ+ SL I + GD +LS+LP WH +ER
Sbjct: 187 DDLATIIFTSGTTGEPKGVMLSHGNFLHQLPSLPLIADLKPGDVWLSVLPVWHSFERIMQ 246
Query: 119 YF--IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 176
Y + GI + D + +P +M SVP ++E++ GI + I ++++
Sbjct: 247 YVAPCYYNGIAYSKPVGSIMLADFKAVRPQWMASVPRIWESVRDGIYRNIRQHGGIKKIL 306
Query: 177 ARALIRISFAYTAFKRIYEGFC--LTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEK 234
+ + A+ + + G R + ++ I W+ +L PL L
Sbjct: 307 FTFFVSVGTAHAYMRNMTLGLLPNFHRRMRALDTVLGCIPWM-------LLTPLKALGNV 359
Query: 235 LVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCN 293
LV+ K+++ +G KAG+SGGG+LP +D F+ A+G+ + GYGLTE++PVIA RR
Sbjct: 360 LVFNKLKALLGGRFKAGISGGGALPSQVDKFFSAVGITLLEGYGLTETAPVIACRRMNNA 419
Query: 294 VLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGW 353
G VG I +TE+KIVD + N LP G +G++ VRG QVM+GY+K P T + L DGW
Sbjct: 420 RPGCVGQIILNTEVKIVDEKGNS-LPPGHQGLIMVRGGQVMKGYYKKPDLTAKVLAPDGW 478
Query: 354 LNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQ 413
NTGD+G + + + + GRAKDTIVL GENVEP +E S I Q
Sbjct: 479 FNTGDLGMLTYDNE----------IKITGRAKDTIVLRGGENVEPAPIEAKINESEWISQ 528
Query: 414 IVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLL 461
+V+GQDQ+ A+IVP ++ ++ A+ +I D L ++ I+ L
Sbjct: 529 CMVVGQDQKYLAALIVPKQDALMAFAQENNIPIVDYETLLQQPEINEL 576
>gi|398335373|ref|ZP_10520078.1| long-chain-fatty-acid--CoA ligase [Leptospira kmetyi serovar
Malaysia str. Bejo-Iso9]
Length = 635
Score = 268 bits (684), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 161/447 (36%), Positives = 261/447 (58%), Gaps = 45/447 (10%)
Query: 1 MRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDD 60
+ ++IL+ G P+I +E V ++ ++++ GR K + R I +D
Sbjct: 138 LEYLILMDG-----TPEIFKEGKVLNFRKVLEEGRTLSKEMVLARADR-------IEPND 185
Query: 61 IATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF 120
+ T +YTSGTTGNPKGVMLTH+N+L QIR++ + + D+ LS+LP WH++ER
Sbjct: 186 LLTLIYTSGTTGNPKGVMLTHENILSQIRNIP--LGLQKEDRILSILPVWHIFERIFEIV 243
Query: 121 IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARAL 180
F+ G + YT +R+LK+D+Q +P +M S P ++E+++ GIQ ++ +++ +
Sbjct: 244 SFTFGCKTYYTNIRSLKEDMQIVKPTFMASAPRLWESIFQGIQTKLQGMKGISKILFQGA 303
Query: 181 IRISFAYTAFKRI-YEGFCLTRNQK---QPSYL-VALIDWLWARIICA-ILWPLHLLAEK 234
++ + RI Y + +N++ P + V + L + II I+ P LL +
Sbjct: 304 LKTN-------RIRYRHLAVLKNRELKLNPEFWPVTIFKKLISFIILTWIVLPAKLL-DL 355
Query: 235 LVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCN 293
+V KK++ A G + KA VSGGG+LP+H+D + AIG+ V GYGLTE+SP+++ R P
Sbjct: 356 IVLKKVRMATGGNLKASVSGGGALPLHVDELFNAIGIPVLEGYGLTETSPILSMRTPEEL 415
Query: 294 VLGSVGHPINHTEIKIVDAETNEVL-----PAGSKGIVKVRGSQVMQGYFKNPSATKQAL 348
++G+VG T+++IVD T + + P G KG + V+G QVM+GY+KN AT++ L
Sbjct: 416 IVGTVGKIFPETQVRIVDVATGKNIYPSSNPFGKKGELIVKGPQVMKGYYKNAEATEKVL 475
Query: 349 DEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRS 408
+DGW TGD+ + L + GR K+TIVLS GEN+EP+ +E S
Sbjct: 476 -QDGWFKTGDLAVLT----------ANSYLKIVGRIKETIVLSNGENLEPVPIEAKLQES 524
Query: 409 SLIRQIVVIGQDQRRPGAIIVPDKEEV 435
LI +V+GQD++ PG ++VP+ E +
Sbjct: 525 PLIEACMVVGQDKKFPGVLVVPNLENL 551
>gi|219119029|ref|XP_002180281.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217408538|gb|EEC48472.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 633
Score = 268 bits (684), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 159/453 (35%), Positives = 259/453 (57%), Gaps = 44/453 (9%)
Query: 56 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI------RSLYDIVPAENGDKFLSMLPP 109
+G DD+AT VYTSGTTG PKGVMLTH NL+HQI + YD + LS+LP
Sbjct: 179 LGRDDLATIVYTSGTTGRPKGVMLTHGNLIHQIGHRVGTETRYDESEPLPDETMLSLLPV 238
Query: 110 WHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTS 169
WH+ ER+ ++ +RG ++Y+++R K+DL +++P + + VP V E + +G+Q + +
Sbjct: 239 WHITERSFELWMLARGCNVVYSSIRTFKNDLAKHRPEWAVLVPRVLEKIATGVQDKFSSG 298
Query: 170 SAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLH 229
S +++++ S A ++I +G+ + +QP ++ L ++ + L PL+
Sbjct: 299 SLPVKLLSKLFTSTSKAAAKHRKITQGYVVG---EQPP---GAMEKLASKALLVALSPLN 352
Query: 230 LLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAAR 288
+ K+V+ K+Q+ G + +SGG +L ++ FYEA G+ + V YGLTE +P+I+ R
Sbjct: 353 AVGNKIVWSKVQNGFGGRMRTIMSGGSALSGSLEEFYEAAGLTIIVAYGLTECAPLISHR 412
Query: 289 RPTCNVL--GSVGHPINHTEIKIVDAETNE------VLPAGSKGIVKVRGSQVMQGYFKN 340
R N++ G VG TE+++V E+ LPAG G+V RG Q+M+GY+K+
Sbjct: 413 RRDANLVTGGCVGTACIDTELRVVSPESKASTTPRPALPAGEVGVVIARGPQIMKGYYKD 472
Query: 341 PSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLE 400
+ TK+A+D+ G+ +TGD+G + P G L+L GRAKDTIVLS GENVEP
Sbjct: 473 VAETKKAIDQFGFFDTGDLGRVNP---------ATGDLILTGRAKDTIVLSNGENVEPGP 523
Query: 401 LEEAALRS-SLIRQIVVIGQDQRRPGAIIVPDKEEV----LMAAKRLSIVHADASELSKE 455
LE+A L SLI Q+++ GQD R+ AI+V E+ ++ +++ +++
Sbjct: 524 LEDAILGELSLIEQVMLTGQDGRKLTAIVVLSPSELANEGFLSKDEGALMQKRNEQVNDP 583
Query: 456 KTISLLYGELRKWTSKCSFQIGPIHVVDEPFTV 488
K+ +KW Q+ ++V EPF +
Sbjct: 584 KSTK----RFQKWE-----QVKDVYVTLEPFAM 607
>gi|410938814|ref|ZP_11370654.1| AMP-binding enzyme [Leptospira noguchii str. 2006001870]
gi|410786015|gb|EKR74966.1| AMP-binding enzyme [Leptospira noguchii str. 2006001870]
Length = 683
Score = 268 bits (684), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 187/520 (35%), Positives = 262/520 (50%), Gaps = 78/520 (15%)
Query: 29 EIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI 88
++++ GR R S + R E I +D+ T +YTSGTTG PKGVML H N++HQ+
Sbjct: 152 DLVEEGRSLRAKGSKKAEKR----IEDIKPEDLFTLIYTSGTTGMPKGVMLMHSNMIHQM 207
Query: 89 RS-----LYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRY 143
L DI P D LS+LP WH++ER Y S GI+ YT V +L++DL +
Sbjct: 208 VHVVPMLLTDIKPT---DSMLSILPIWHIFERVNEYGAISSGIQTYYTKVADLRNDLAKA 264
Query: 144 QPHYMISVPLVYETLYSGIQKQIF---TSSAARRVVARALIRISFAYTAFKRIYEGFCLT 200
+P +M S P V+E +Y+ I ++ + RR++ + S Y A +R G +
Sbjct: 265 KPSFMASAPRVWENVYANIYNKVNDPKQTPPIRRILFKLAYFFSKHYNASRRFLNGLEVD 324
Query: 201 RNQKQ----------------------------------PSYLVALIDWLWARIICAILW 226
++ P Y V L +WL+ + L
Sbjct: 325 YEKRNILKSLAIGIKSLIILLLTGPFTLSAISILAYLTLPVYRVHLPNWLFFSLAGLGLV 384
Query: 227 PLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVI 285
+ +V KI+ A G KA +SGGG+L H+D F+ IG+ V GYG+TE+SPVI
Sbjct: 385 FNAKTLDTIVLSKIRGATGGRLKASLSGGGALQSHVDNFFNDIGMLVLEGYGMTETSPVI 444
Query: 286 AARRPTCNVLGSVGHPINHTEIKIVDAETN---------EVLPA--GSKGIVKVRGSQVM 334
+ R ++GSVG + +E+ I D N EVL G KGIV V+G QVM
Sbjct: 445 SVRPFVKPIIGSVGFLVPKSELIIKDENGNVLTHINDQFEVLAGKLGQKGIVFVKGPQVM 504
Query: 335 QGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGE 394
+GY+KNP TK+ + DGW+NTGDIG+I L L GRAKDT+VL GE
Sbjct: 505 KGYYKNPEVTKKTII-DGWMNTGDIGFI----------NFKKTLTLTGRAKDTVVLLGGE 553
Query: 395 NVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK 454
NVEP+ +E S I+Q +VIGQDQ+ GAIIVPD E + + K I + E+ K
Sbjct: 554 NVEPVPIENKMDESPFIKQSMVIGQDQKVLGAIIVPDIEHLAVWCKENGIDSSKIDEIIK 613
Query: 455 E-KTISLLYGELRKWTS-KCSF----QIGPIHVVDEPFTV 488
K I E+R + S K F Q+ I + +PF V
Sbjct: 614 NPKVIDFYKKEVRNYNSTKTGFKSFEQVQHIILAKKPFEV 653
>gi|359684409|ref|ZP_09254410.1| long-chain-fatty-acid--CoA ligase [Leptospira santarosai str.
2000030832]
gi|421112436|ref|ZP_15572893.1| AMP-binding enzyme [Leptospira santarosai str. JET]
gi|410802081|gb|EKS08242.1| AMP-binding enzyme [Leptospira santarosai str. JET]
gi|456875451|gb|EMF90652.1| AMP-binding enzyme [Leptospira santarosai str. ST188]
Length = 683
Score = 267 bits (683), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 182/513 (35%), Positives = 261/513 (50%), Gaps = 74/513 (14%)
Query: 36 ESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIV 95
E KA + + E I +D+ T +YTSGTTG PKGVML H N++HQ + +V
Sbjct: 155 EEGKALRAKGSRKAEKRIEDIKPEDLFTLIYTSGTTGMPKGVMLMHSNMVHQ---MVHVV 211
Query: 96 P-----AENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMIS 150
P + D LS+LP WH++ER Y SRGI+ YT V +LK+DL + +P +M S
Sbjct: 212 PMLLTNTKPTDSMLSILPIWHIFERVNEYGAISRGIQTYYTKVTDLKNDLTKAKPSFMGS 271
Query: 151 VPLVYETLYSGIQKQIF---TSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQ-- 205
P V+E +Y+ I ++ + R+ + + S Y A +R G + +
Sbjct: 272 APRVWENVYTNIYNKVNDPKQTPPLRKFLFKLAYFFSKHYNASRRFLNGLEVDYENRNIL 331
Query: 206 -------PSYLVALIDWLWARIICAIL--------------WPLHLLA-----------E 233
S +V L+ + AIL WP ++A +
Sbjct: 332 KSVAIGTKSLIVLLLTGPFTLSAMAILAYLTLPTYGVRLPGWPFLMIAGLGLIFNAKTLD 391
Query: 234 KLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTC 292
+V KI++A G K +SGGG+L H+D F+ IG+ V GYG+TE+SPVI+ R
Sbjct: 392 AIVLSKIRAATGGRLKGSLSGGGALQSHVDNFFNDIGMLVLEGYGMTETSPVISVRPFAK 451
Query: 293 NVLGSVGHPINHTEIKIVDAETN---------EVLPA--GSKGIVKVRGSQVMQGYFKNP 341
++GSVG + +E+ I D N E+L G KG+V V+G QVM+GY+KNP
Sbjct: 452 PIIGSVGFLVPKSELMIKDENGNVLTHINDKFEILAGKLGQKGVVFVKGPQVMKGYYKNP 511
Query: 342 SATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLEL 401
TK+ + DGW+NTGDIG+I L L GRAKDT+VL GENVEP+ +
Sbjct: 512 EVTKKTI-ADGWMNTGDIGFI----------NFKKTLTLTGRAKDTVVLLGGENVEPVPI 560
Query: 402 EEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE-KTISL 460
E S I+Q +VIGQD++ GAIIVPD E++ + K I + +L K K I
Sbjct: 561 ENKMDESPFIKQSMVIGQDKKVLGAIIVPDMEQLTLWCKENEIDSSKIDDLIKNPKVIDF 620
Query: 461 LYGELRKWTS-KCSF----QIGPIHVVDEPFTV 488
E+R + S K F Q+ I + +PF V
Sbjct: 621 YKKEVRNYNSTKTGFKSFEQVQHIILAKKPFEV 653
>gi|183222283|ref|YP_001840279.1| long-chain acyl-CoA synthetase [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
gi|189912333|ref|YP_001963888.1| long-chain-fatty-acid--CoA ligase [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167777009|gb|ABZ95310.1| Long-chain-fatty-acid--CoA ligase [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167780705|gb|ABZ99003.1| Long-chain acyl-CoA synthetase (AMP-forming) [Leptospira biflexa
serovar Patoc strain 'Patoc 1 (Paris)']
Length = 629
Score = 267 bits (683), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 164/424 (38%), Positives = 244/424 (57%), Gaps = 34/424 (8%)
Query: 20 EEIPVFSYDEIIDLGRESRKAFSDSNDARKH-YKYETIGSDDIATYVYTSGTTGNPKGVM 78
++I +F+ E++ G E RK D H ++ TI D+ T +YTSGTTG PKGVM
Sbjct: 146 KKIRIFTLQELVAKGSEKRK-----EDPSDHLFQNNTIIESDLFTMIYTSGTTGTPKGVM 200
Query: 79 LTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKD 138
LTH N+L Q+ +L + GDK LS+LP WH++ER F S G Y++VR LK+
Sbjct: 201 LTHGNILFQLHNL--PIRLNKGDKTLSILPIWHIFERIFEIFSLSYGACTYYSSVRTLKE 258
Query: 139 DLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFC 198
DL+ +P++M S P ++E++YSGI + SS ++ + + + + + ++I G
Sbjct: 259 DLRFVKPNFMASAPRLWESIYSGILGTLNKSSRLKQKMFQVSMFFAKIFFHSRQIITGNV 318
Query: 199 LTRNQKQPSYLVAL-IDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAG-VSGGGS 256
L P I +++ I ++W +L+ + LV KI+ A G G VSGGG+
Sbjct: 319 L---DIHPIVFWKFSIRYVFHLIRFFLVWIPYLVFDFLVLSKIRKATGGELRGSVSGGGA 375
Query: 257 LPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNE 316
LP H+D F+ IG+ V GYG+TE++PV+A R + GSVG T++++VD +T E
Sbjct: 376 LPFHVDEFFNMIGIPVLEGYGMTETAPVLAMRTFEEIIPGSVGKIFPKTQLRLVDLQTGE 435
Query: 317 V--------LPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIG-WIAPHHS 367
V G KG + V+G+QVM GY+KNP AT + L DGWLNTGD+G + + HH
Sbjct: 436 VFLDTEIGKFVYGRKGEIHVKGNQVMAGYYKNPDATNKVL-VDGWLNTGDLGIFTSNHHL 494
Query: 368 RGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAI 427
R + GR+K+TIVL GENVEP+ +E L S I Q +V+GQDQ+ A+
Sbjct: 495 R-----------IVGRSKETIVLLGGENVEPVPIESKILESEWIDQCMVVGQDQKFLSAL 543
Query: 428 IVPD 431
+ P+
Sbjct: 544 VYPN 547
>gi|422005407|ref|ZP_16352593.1| long-chain-fatty-acid--CoA ligase [Leptospira santarosai serovar
Shermani str. LT 821]
gi|417255906|gb|EKT85355.1| long-chain-fatty-acid--CoA ligase [Leptospira santarosai serovar
Shermani str. LT 821]
Length = 683
Score = 267 bits (683), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 184/520 (35%), Positives = 262/520 (50%), Gaps = 75/520 (14%)
Query: 29 EIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI 88
+I DL E KA + + E I +D+ T +YTSGTTG PKGVML H N++HQ
Sbjct: 149 KIYDLVEEG-KALRAKGSRKAEKRIEDIKPEDLFTLIYTSGTTGMPKGVMLMHSNMVHQ- 206
Query: 89 RSLYDIVP-----AENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRY 143
+ +VP + D LS+LP WH++ER Y SRGI+ YT V +LK+DL +
Sbjct: 207 --MVHVVPMLLTNTKPTDSMLSILPIWHIFERVNEYGAISRGIQTYYTKVTDLKNDLTKA 264
Query: 144 QPHYMISVPLVYETLYSGIQKQIF---TSSAARRVVARALIRISFAYTAFKRIYEGFCLT 200
+P +M S P V+E +Y+ I ++ + R+ + + S Y A +R G +
Sbjct: 265 KPSFMGSAPRVWENVYTNIYNKVNDPKQTPPLRKFLFKLAYFFSKHYNASRRFLNGLEVD 324
Query: 201 RNQKQ----------------------------------PSYLVALIDWLWARIICAILW 226
+ P+Y V L +WL+ I L
Sbjct: 325 YENRNILKSVAIGTKSLIVLLLTGPFTLSAMAILAYLTLPTYGVRLPNWLFFTIAGLGLI 384
Query: 227 PLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVI 285
+ +V KI++A G K +SGGG+L H+D F+ IG+ V GYG+TE+SPVI
Sbjct: 385 FNAKTLDAIVLSKIRAATGGRLKGSLSGGGALQSHVDNFFNDIGMLVLEGYGMTETSPVI 444
Query: 286 AARRPTCNVLGSVGHPINHTEIKIVDAETN---------EVLPA--GSKGIVKVRGSQVM 334
+ R ++GSVG + +E+ I D N E+L G KG+V V+G QVM
Sbjct: 445 SVRPFAKPIIGSVGFLVPKSELMIKDENGNVLTHINDKFEILAGKLGQKGVVFVKGPQVM 504
Query: 335 QGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGE 394
+GY+KNP TK+ + DGW+NTGDIG+I L L GRAKDT+VL GE
Sbjct: 505 KGYYKNPEVTKKTI-ADGWMNTGDIGFI----------NFKKTLTLTGRAKDTVVLLGGE 553
Query: 395 NVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK 454
NVEP+ +E S I+Q +VIGQD++ GAIIVPD E++ + K I + +L K
Sbjct: 554 NVEPVPIENKMDESPFIKQSMVIGQDKKVLGAIIVPDMEQLTLWCKENEIDSSKIDDLIK 613
Query: 455 E-KTISLLYGELRKWTS-KCSF----QIGPIHVVDEPFTV 488
K I E+R + S K F Q+ I + +PF V
Sbjct: 614 NPKVIDFYKKEVRNYNSTKTGFKSFEQVQHIILAKKPFEV 653
>gi|410448177|ref|ZP_11302263.1| AMP-binding enzyme [Leptospira sp. Fiocruz LV3954]
gi|410018076|gb|EKO80122.1| AMP-binding enzyme [Leptospira sp. Fiocruz LV3954]
Length = 683
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 185/520 (35%), Positives = 265/520 (50%), Gaps = 75/520 (14%)
Query: 29 EIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI 88
+I DL E KA + + E I +D+ T +YTSGTTG PKGVML H N++HQ
Sbjct: 149 KIYDLVEEG-KALRAKGSRKAEKRIEDIKPEDLFTLIYTSGTTGMPKGVMLMHSNMVHQ- 206
Query: 89 RSLYDIVP-----AENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRY 143
+ +VP + D LS+LP WH++ER Y SRGI+ YT V +LK+DL +
Sbjct: 207 --MVHVVPMLLTNTKPTDSMLSILPIWHIFERVNEYGAISRGIQTYYTKVTDLKNDLTKA 264
Query: 144 QPHYMISVPLVYETLYSGIQKQIF---TSSAARRVVARALIRISFAYTAFKRIYEGFCLT 200
+P +M S P V+E +Y+ I ++ + R+ + + S Y A +R G +
Sbjct: 265 KPSFMGSAPRVWENVYTNIYNKVNDPKQTPPLRKFLFKLAYFFSKHYNASRRFLNGLEVD 324
Query: 201 RNQKQ---------PSYLVALIDWLWARIICAIL--------------WPLHLLA----- 232
+ S +V L+ + AIL WP ++A
Sbjct: 325 YENRNILKSVAIGTKSLIVLLLTGPFTLSAMAILAYLTLPTYGVRFPGWPFLIIAGLGLI 384
Query: 233 ------EKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVI 285
+ +V KI++A G K +SGGG+L H+D F+ IG+ V GYG+TE+SPVI
Sbjct: 385 FNAKTLDAIVLSKIRAATGGRLKGSLSGGGALQSHVDNFFNDIGMLVLEGYGMTETSPVI 444
Query: 286 AARRPTCNVLGSVGHPINHTEIKIVDAETN---------EVLPA--GSKGIVKVRGSQVM 334
+ R ++GSVG + +E+ I D N E+L G KG+V V+G QVM
Sbjct: 445 SVRPFAKPIIGSVGFLVPKSELMIKDENGNVLTHINDKFEILAGKLGQKGVVFVKGPQVM 504
Query: 335 QGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGE 394
+GY+KNP TK+ + DGW+NTGDIG+I L L GRAKDT+VL GE
Sbjct: 505 KGYYKNPEVTKKTI-ADGWMNTGDIGFI----------NFKKTLTLTGRAKDTVVLLGGE 553
Query: 395 NVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK 454
NVEP+ +E S I+Q +VIGQD++ GAIIVPD E++ + K I + +L K
Sbjct: 554 NVEPVPIENKMDESPFIKQSMVIGQDKKVLGAIIVPDMEQLTLWCKENEIDSSKIDDLIK 613
Query: 455 E-KTISLLYGELRKWTS-KCSF----QIGPIHVVDEPFTV 488
K I E+R + S K F Q+ I + +PF V
Sbjct: 614 NPKVIDFYKKEVRNYNSTKTGFKSFEQVQHIILAKKPFEV 653
>gi|418744637|ref|ZP_13300990.1| AMP-binding enzyme [Leptospira santarosai str. CBC379]
gi|418753073|ref|ZP_13309329.1| AMP-binding enzyme [Leptospira santarosai str. MOR084]
gi|409966756|gb|EKO34597.1| AMP-binding enzyme [Leptospira santarosai str. MOR084]
gi|410794519|gb|EKR92421.1| AMP-binding enzyme [Leptospira santarosai str. CBC379]
Length = 683
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 181/513 (35%), Positives = 258/513 (50%), Gaps = 74/513 (14%)
Query: 36 ESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIV 95
E KA + + E I +D+ T +YTSGTTG PKGVML H N++HQ + +V
Sbjct: 155 EEGKALRAKGSRKAEKRIEDIKPEDLFTLIYTSGTTGMPKGVMLMHSNMVHQ---MVHVV 211
Query: 96 P-----AENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMIS 150
P + D LS+LP WH++ER Y SRGI+ YT V +LK+DL + +P +M S
Sbjct: 212 PMLLTNTKPTDSMLSILPIWHIFERVNEYGAISRGIQTYYTKVTDLKNDLTKAKPSFMGS 271
Query: 151 VPLVYETLYSGIQKQIF---TSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQ-- 205
P V+E +Y+ I ++ + R+ + + S Y A +R G + +
Sbjct: 272 APRVWENVYTNIYNKVNDPKQTPPLRKFLFKLAYFFSKHYNASRRFLNGLEVDYENRNIL 331
Query: 206 --------------------------------PSYLVALIDWLWARIICAILWPLHLLAE 233
P+Y V L +WL+ I L +
Sbjct: 332 KSVAIGTKSLIVLLLTGPFTLSAMAILAYLTLPTYGVRLPNWLFFTIAGLGLIFNAKTLD 391
Query: 234 KLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTC 292
+V KI++A G K +SGGG+L H+D F+ IG+ V GYG+TE+SPVI+ R
Sbjct: 392 AIVLSKIRAATGGRLKGSLSGGGALQSHVDNFFNDIGMLVLEGYGMTETSPVISVRPFAK 451
Query: 293 NVLGSVGHPINHTEIKIVDAETN---------EVLPA--GSKGIVKVRGSQVMQGYFKNP 341
++GSVG + +E+ I D N E+L G KG+V V+G QVM+GY+KNP
Sbjct: 452 PIIGSVGFLVPKSELMIKDENGNVLTHINDKFEILAGKLGQKGVVFVKGPQVMKGYYKNP 511
Query: 342 SATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLEL 401
TK+ + DGW+NTGDIG+I L L GRAKDT+VL GENVEP+ +
Sbjct: 512 EVTKKTI-ADGWMNTGDIGFI----------NFKKTLTLTGRAKDTVVLLGGENVEPVPI 560
Query: 402 EEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE-KTISL 460
E S I+Q +VIGQD++ GAIIVPD E++ + K I + +L K K I
Sbjct: 561 ENKMDESPFIKQSMVIGQDKKVLGAIIVPDMEQLTLWCKENEIDSSKIDDLIKNPKVIDF 620
Query: 461 LYGELRKWTS-KCSF----QIGPIHVVDEPFTV 488
E+R + S K F Q+ I + +PF V
Sbjct: 621 YKKEVRNYNSTKTGFKSFEQVQHIILAKKPFEV 653
>gi|408794088|ref|ZP_11205693.1| AMP-binding enzyme [Leptospira meyeri serovar Hardjo str. Went 5]
gi|408461323|gb|EKJ85053.1| AMP-binding enzyme [Leptospira meyeri serovar Hardjo str. Went 5]
Length = 650
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 160/417 (38%), Positives = 238/417 (57%), Gaps = 34/417 (8%)
Query: 24 VFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKN 83
V S ++++ G+ RK D + + + I DD+ T +YTSGTTG PKGVMLTH N
Sbjct: 170 VLSINDLLIKGKNLRKL----GDRKVEERVQAIQPDDLFTIIYTSGTTGEPKGVMLTHAN 225
Query: 84 LLHQIRSLYDIVPAENG--DKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQ 141
++ Q+R+ +P E G D+FLS+LP WH +ER + G YT VRN+++DL
Sbjct: 226 MISQLRN----IPIEIGPKDRFLSILPVWHSFERVFQMGTIAVGATQYYTNVRNIREDLL 281
Query: 142 RYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTR 201
+P +M S P ++E++Y GIQ +I T S ++V+ + AY +I +
Sbjct: 282 IVKPTFMASAPRLWESIYQGIQSKIQTGSIMKKVLFK------LAYGCALQIQSSIQFLK 335
Query: 202 NQKQPSYLVALIDWLWARIIC----AILWPLHLLAEKLVYKKIQSAIGISKAG-VSGGGS 256
+ Y L + II +L+ + + +V K++ A G G VSGGGS
Sbjct: 336 GNRLDLYGRNLFQSITLGIISLVSITVLFVPFFILDLIVLSKLRHATGGKLRGTVSGGGS 395
Query: 257 LPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNE 316
LP HID F+ I + V GYGLTE+SP +A R V+GSVG TEI + D ET
Sbjct: 396 LPFHIDEFFNTIRIPVFEGYGLTETSPGLAFRTAKHLVVGSVGPIFPGTEILLKDIETGV 455
Query: 317 VL---PAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRR 373
V+ G KG + VRG Q+M+GY+K P AT + L +DGWLNTGD+G + +++
Sbjct: 456 VIYPPKKGIKGEIYVRGPQIMKGYYKRPEATSKVLSDDGWLNTGDLGVMTFNNT------ 509
Query: 374 CGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVP 430
L + GR K+T+VL GEN+EP+ +E ++S+LI Q++++GQDQ+ GA+I+P
Sbjct: 510 ----LKIVGRTKETVVLLNGENIEPVPIENKLIQSTLIEQVMIVGQDQKYLGALILP 562
>gi|294827577|ref|NP_710287.2| long-chain-fatty-acid CoA ligase [Leptospira interrogans serovar
Lai str. 56601]
gi|386072580|ref|YP_005986897.1| long-chain-fatty-acid CoA ligase [Leptospira interrogans serovar
Lai str. IPAV]
gi|293385420|gb|AAN47305.2| long-chain-fatty-acid CoA ligase [Leptospira interrogans serovar
Lai str. 56601]
gi|353456369|gb|AER00914.1| long-chain-fatty-acid CoA ligase [Leptospira interrogans serovar
Lai str. IPAV]
Length = 683
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 191/541 (35%), Positives = 273/541 (50%), Gaps = 77/541 (14%)
Query: 5 ILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATY 64
I++ K SS + +I YD +++ GR R S + R E I +D+ T
Sbjct: 133 IIIMDKSSSAKGKNIHKI----YD-LVEEGRSLRAKGSKKAEKR----IEEIKPEDLFTL 183
Query: 65 VYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAE--NGDKFLSMLPPWHVYERACGYFIF 122
+YTSGTTG PKGVML H N++HQ+ + ++ E D LS+LP WH++ER Y
Sbjct: 184 IYTSGTTGMPKGVMLMHSNMIHQMVYVVPMLLTEIKPTDSMLSILPIWHIFERINEYGAI 243
Query: 123 SRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIF---TSSAARRVVARA 179
S GI+ YT V +L++DL + +P +M S P V+E +Y+ I +I + RRV+ +
Sbjct: 244 SSGIQTYYTKVADLRNDLAKAKPSFMASAPRVWENVYANIYNKINDPKQTPPIRRVLFKL 303
Query: 180 LIRISFAYTAFKRIYEGFCLTRNQKQ---------------------------------- 205
S Y A +R G + +
Sbjct: 304 AYFFSKHYNASRRFLNGLEVDYENRNIMKSLVIGIRSLIVLLLTGPFTLSAISILAYLTL 363
Query: 206 PSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLF 264
P Y + L +WL+ ++ L + +V KI++A G KA +SGGG+L H+D F
Sbjct: 364 PVYGIHLPNWLFFSLVGLGLVFNAKTLDTIVLSKIRAATGGRLKASLSGGGALQSHVDNF 423
Query: 265 YEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETN--------- 315
+ IG+ V GYG+TE+SPVI+ R ++GSVG + +E+ I D N
Sbjct: 424 FNDIGMLVLEGYGMTETSPVISVRPFVKPIIGSVGFLVPKSELIIKDENGNVLTHINDQY 483
Query: 316 EVLPA--GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRR 373
EVL G KGIV V+G QVM+GY+KNP TK+ + DGW+NTGDIG+I
Sbjct: 484 EVLAGKLGQKGIVFVKGPQVMKGYYKNPEVTKKTI-VDGWMNTGDIGFI----------N 532
Query: 374 CGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 433
L L GRAKDT+VL GENVEP+ +E S I+Q +VIGQDQ+ GAIIVPD E
Sbjct: 533 FKKTLTLTGRAKDTVVLLGGENVEPVPIENKMDESPFIKQSMVIGQDQKVLGAIIVPDME 592
Query: 434 EVLMAAKRLSIVHADASELSKE-KTISLLYGELRKWTS-KCSF----QIGPIHVVDEPFT 487
+ + K I + E+ K K I E+R + S K F Q+ + + +PF
Sbjct: 593 HLGVWCKENGIDSSKIDEIIKNPKVIDFYKKEVRSYNSTKTGFKSFEQVQHVILAKKPFE 652
Query: 488 V 488
V
Sbjct: 653 V 653
>gi|456973085|gb|EMG13345.1| AMP-binding enzyme domain protein [Leptospira interrogans serovar
Grippotyphosa str. LT2186]
Length = 568
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 190/541 (35%), Positives = 273/541 (50%), Gaps = 77/541 (14%)
Query: 5 ILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATY 64
I++ K SS + +I YD +++ GR R S + R E I +D+ T
Sbjct: 18 IIIMDKSSSAKGKNIHKI----YD-LVEEGRSLRAKGSKKAEKR----IEEIKPEDLFTL 68
Query: 65 VYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAE--NGDKFLSMLPPWHVYERACGYFIF 122
+YTSGTTG PKGVML H N++HQ+ + ++ E D LS+LP WH++ER Y
Sbjct: 69 IYTSGTTGMPKGVMLMHSNMIHQMVYVVPMLLTEIKPTDSMLSILPIWHIFERINEYGAI 128
Query: 123 SRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIF---TSSAARRVVARA 179
S GI+ YT V +L++DL + +P +M S P V+E +Y+ I ++ + RRV+ +
Sbjct: 129 SSGIQTYYTKVADLRNDLAKAKPSFMASAPRVWENVYANIYNKVNDPKQTPPIRRVLFKL 188
Query: 180 LIRISFAYTAFKRIYEGFCLTRNQKQ---------------------------------- 205
S Y A +R G + +
Sbjct: 189 AYFFSKHYNASRRFLNGLEVDYENRNIMKSLVIGIRSLIVLLLTGPFTLSAISILAYLTL 248
Query: 206 PSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLF 264
P Y + L +WL+ ++ L + +V KI++A G KA +SGGG+L H+D F
Sbjct: 249 PVYGIHLPNWLFFSLVGLGLVFNAKTLDTIVLSKIRAATGGRLKASLSGGGALQSHVDNF 308
Query: 265 YEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETN--------- 315
+ IG+ V GYG+TE+SPVI+ R ++GSVG + +E+ I D N
Sbjct: 309 FNDIGMLVLEGYGMTETSPVISVRPFVKPIIGSVGFLVPKSELIIKDENGNVLTHINDQY 368
Query: 316 EVLPA--GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRR 373
EVL G KGIV V+G QVM+GY+KNP TK+ + DGW+NTGDIG+I
Sbjct: 369 EVLAGKLGQKGIVFVKGPQVMKGYYKNPEVTKKTI-VDGWMNTGDIGFI----------N 417
Query: 374 CGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 433
L L GRAKDT+VL GENVEP+ +E S I+Q +VIGQDQ+ GAIIVPD E
Sbjct: 418 FKKTLTLTGRAKDTVVLLGGENVEPVPIENKMDESPFIKQSMVIGQDQKVLGAIIVPDME 477
Query: 434 EVLMAAKRLSIVHADASELSKE-KTISLLYGELRKWTS-KCSF----QIGPIHVVDEPFT 487
+ + K I + E+ K K I E+R + S K F Q+ + + +PF
Sbjct: 478 HLGVWCKENGIDSSKIDEIIKNPKVIDFYKKEVRSYNSTKTGFKSFEQVQHVILAKKPFE 537
Query: 488 V 488
V
Sbjct: 538 V 538
>gi|417763141|ref|ZP_12411124.1| AMP-binding enzyme [Leptospira interrogans str. 2002000624]
gi|417770357|ref|ZP_12418267.1| AMP-binding enzyme [Leptospira interrogans serovar Pomona str.
Pomona]
gi|417774734|ref|ZP_12422598.1| AMP-binding enzyme [Leptospira interrogans str. 2002000621]
gi|417785227|ref|ZP_12432932.1| AMP-binding enzyme [Leptospira interrogans str. C10069]
gi|418669903|ref|ZP_13231277.1| AMP-binding enzyme [Leptospira interrogans serovar Pyrogenes str.
2006006960]
gi|418674006|ref|ZP_13235316.1| AMP-binding enzyme [Leptospira interrogans str. 2002000623]
gi|418680806|ref|ZP_13242044.1| AMP-binding enzyme [Leptospira interrogans serovar Pomona str.
Kennewicki LC82-25]
gi|418689298|ref|ZP_13250420.1| AMP-binding enzyme [Leptospira interrogans str. FPW2026]
gi|418698387|ref|ZP_13259364.1| AMP-binding enzyme [Leptospira interrogans serovar Bataviae str.
L1111]
gi|418705067|ref|ZP_13265932.1| AMP-binding enzyme [Leptospira interrogans serovar Hebdomadis str.
R499]
gi|418707727|ref|ZP_13268547.1| AMP-binding enzyme [Leptospira interrogans serovar Grippotyphosa
str. UI 08368]
gi|418713238|ref|ZP_13273965.1| AMP-binding enzyme [Leptospira interrogans str. UI 08452]
gi|418726949|ref|ZP_13285548.1| AMP-binding enzyme [Leptospira interrogans str. UI 12621]
gi|418730735|ref|ZP_13289211.1| AMP-binding enzyme [Leptospira interrogans str. UI 12758]
gi|421117442|ref|ZP_15577805.1| AMP-binding enzyme [Leptospira interrogans serovar Canicola str.
Fiocruz LV133]
gi|421123073|ref|ZP_15583355.1| AMP-binding enzyme [Leptospira interrogans str. Brem 329]
gi|400327456|gb|EJO79707.1| AMP-binding enzyme [Leptospira interrogans serovar Pomona str.
Kennewicki LC82-25]
gi|400361443|gb|EJP17409.1| AMP-binding enzyme [Leptospira interrogans str. FPW2026]
gi|409941197|gb|EKN86831.1| AMP-binding enzyme [Leptospira interrogans str. 2002000624]
gi|409947911|gb|EKN97905.1| AMP-binding enzyme [Leptospira interrogans serovar Pomona str.
Pomona]
gi|409952016|gb|EKO06530.1| AMP-binding enzyme [Leptospira interrogans str. C10069]
gi|409959696|gb|EKO23462.1| AMP-binding enzyme [Leptospira interrogans str. UI 12621]
gi|410011153|gb|EKO69281.1| AMP-binding enzyme [Leptospira interrogans serovar Canicola str.
Fiocruz LV133]
gi|410343817|gb|EKO95012.1| AMP-binding enzyme [Leptospira interrogans str. Brem 329]
gi|410575576|gb|EKQ38594.1| AMP-binding enzyme [Leptospira interrogans str. 2002000621]
gi|410578989|gb|EKQ46840.1| AMP-binding enzyme [Leptospira interrogans str. 2002000623]
gi|410754193|gb|EKR15848.1| AMP-binding enzyme [Leptospira interrogans serovar Pyrogenes str.
2006006960]
gi|410762530|gb|EKR28691.1| AMP-binding enzyme [Leptospira interrogans serovar Bataviae str.
L1111]
gi|410764918|gb|EKR35620.1| AMP-binding enzyme [Leptospira interrogans serovar Hebdomadis str.
R499]
gi|410772148|gb|EKR47342.1| AMP-binding enzyme [Leptospira interrogans serovar Grippotyphosa
str. UI 08368]
gi|410774297|gb|EKR54305.1| AMP-binding enzyme [Leptospira interrogans str. UI 12758]
gi|410790321|gb|EKR84015.1| AMP-binding enzyme [Leptospira interrogans str. UI 08452]
gi|455666916|gb|EMF32288.1| AMP-binding enzyme [Leptospira interrogans serovar Pomona str. Fox
32256]
gi|456824239|gb|EMF72676.1| AMP-binding enzyme [Leptospira interrogans serovar Canicola str.
LT1962]
Length = 683
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 190/541 (35%), Positives = 273/541 (50%), Gaps = 77/541 (14%)
Query: 5 ILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATY 64
I++ K SS + +I YD +++ GR R S + R E I +D+ T
Sbjct: 133 IIIMDKSSSAKGKNIHKI----YD-LVEEGRSLRAKGSKKAEKR----IEEIKPEDLFTL 183
Query: 65 VYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAE--NGDKFLSMLPPWHVYERACGYFIF 122
+YTSGTTG PKGVML H N++HQ+ + ++ E D LS+LP WH++ER Y
Sbjct: 184 IYTSGTTGMPKGVMLMHSNMIHQMVYVVPMLLTEIKPTDSMLSILPIWHIFERINEYGAI 243
Query: 123 SRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIF---TSSAARRVVARA 179
S GI+ YT V +L++DL + +P +M S P V+E +Y+ I ++ + RRV+ +
Sbjct: 244 SSGIQTYYTKVADLRNDLAKAKPSFMASAPRVWENVYANIYNKVNDPKQTPPIRRVLFKL 303
Query: 180 LIRISFAYTAFKRIYEGFCLTRNQKQ---------------------------------- 205
S Y A +R G + +
Sbjct: 304 AYFFSKHYNASRRFLNGLEVDYENRNIMKSLVIGIRSLIVLLLTGPFTLSAISILAYLTL 363
Query: 206 PSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLF 264
P Y + L +WL+ ++ L + +V KI++A G KA +SGGG+L H+D F
Sbjct: 364 PVYGIHLPNWLFFSLVGLGLVFNAKTLDTIVLSKIRAATGGRLKASLSGGGALQSHVDNF 423
Query: 265 YEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETN--------- 315
+ IG+ V GYG+TE+SPVI+ R ++GSVG + +E+ I D N
Sbjct: 424 FNDIGMLVLEGYGMTETSPVISVRPFVKPIIGSVGFLVPKSELIIKDENGNVLTHINDQY 483
Query: 316 EVLPA--GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRR 373
EVL G KGIV V+G QVM+GY+KNP TK+ + DGW+NTGDIG+I
Sbjct: 484 EVLAGKLGQKGIVFVKGPQVMKGYYKNPEVTKKTI-VDGWMNTGDIGFI----------N 532
Query: 374 CGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 433
L L GRAKDT+VL GENVEP+ +E S I+Q +VIGQDQ+ GAIIVPD E
Sbjct: 533 FKKTLTLTGRAKDTVVLLGGENVEPVPIENKMDESPFIKQSMVIGQDQKVLGAIIVPDME 592
Query: 434 EVLMAAKRLSIVHADASELSKE-KTISLLYGELRKWTS-KCSF----QIGPIHVVDEPFT 487
+ + K I + E+ K K I E+R + S K F Q+ + + +PF
Sbjct: 593 HLGVWCKENGIDSSKIDEIIKNPKVIDFYKKEVRSYNSTKTGFKSFEQVQHVILAKKPFE 652
Query: 488 V 488
V
Sbjct: 653 V 653
>gi|417767938|ref|ZP_12415873.1| AMP-binding enzyme [Leptospira interrogans serovar Bulgarica str.
Mallika]
gi|400349383|gb|EJP01676.1| AMP-binding enzyme [Leptospira interrogans serovar Bulgarica str.
Mallika]
Length = 683
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 190/541 (35%), Positives = 273/541 (50%), Gaps = 77/541 (14%)
Query: 5 ILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATY 64
I++ K SS + +I YD +++ GR R S + R E I +D+ T
Sbjct: 133 IIIMDKSSSAKGKNIHKI----YD-LVEEGRSLRAKGSKKAEKR----IEEIKPEDLFTL 183
Query: 65 VYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAE--NGDKFLSMLPPWHVYERACGYFIF 122
+YTSGTTG PKGVML H N++HQ+ + ++ E D LS+LP WH++ER Y
Sbjct: 184 IYTSGTTGMPKGVMLMHSNMIHQMVYVVPMLLTEIKPTDSMLSILPIWHIFERINEYGAI 243
Query: 123 SRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIF---TSSAARRVVARA 179
S GI+ YT V +L++DL + +P +M S P V+E +Y+ I ++ + RRV+ +
Sbjct: 244 SSGIQTYYTKVADLRNDLAKAKPSFMASAPRVWENVYANIYNKVNDPKQTPPIRRVLFKL 303
Query: 180 LIRISFAYTAFKRIYEGFCLTRNQKQ---------------------------------- 205
S Y A +R G + +
Sbjct: 304 AYFFSKHYNASRRFLNGLEVDYENRNIMKSLVIGIRSLIVLLLTGPFTLSAISILAYLTL 363
Query: 206 PSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLF 264
P Y + L +WL+ ++ L + +V KI++A G KA +SGGG+L H+D F
Sbjct: 364 PVYGIHLPNWLFFSLVGLGLIFNAKTLDTIVLSKIRAATGGRLKASLSGGGALQSHVDNF 423
Query: 265 YEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETN--------- 315
+ IG+ V GYG+TE+SPVI+ R ++GSVG + +E+ I D N
Sbjct: 424 FNDIGMLVLEGYGMTETSPVISVRPFVKPIIGSVGFLVPKSELIIKDENGNVLTHINDQY 483
Query: 316 EVLPA--GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRR 373
EVL G KGIV V+G QVM+GY+KNP TK+ + DGW+NTGDIG+I
Sbjct: 484 EVLAGKLGQKGIVFVKGPQVMKGYYKNPEVTKKTI-VDGWMNTGDIGFI----------N 532
Query: 374 CGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 433
L L GRAKDT+VL GENVEP+ +E S I+Q +VIGQDQ+ GAIIVPD E
Sbjct: 533 FKKTLTLTGRAKDTVVLLGGENVEPVPIENKMDESPFIKQSMVIGQDQKVLGAIIVPDME 592
Query: 434 EVLMAAKRLSIVHADASELSKE-KTISLLYGELRKWTS-KCSF----QIGPIHVVDEPFT 487
+ + K I + E+ K K I E+R + S K F Q+ + + +PF
Sbjct: 593 HLGVWCKENGIDSSKIDEIIKNPKVIDFYKKEVRSYNSTKTGFKSFEQVQHVILAKKPFE 652
Query: 488 V 488
V
Sbjct: 653 V 653
>gi|359729105|ref|ZP_09267801.1| long-chain-fatty-acid--CoA ligase [Leptospira weilii str.
2006001855]
gi|417780351|ref|ZP_12428115.1| AMP-binding enzyme [Leptospira weilii str. 2006001853]
gi|410779590|gb|EKR64204.1| AMP-binding enzyme [Leptospira weilii str. 2006001853]
Length = 683
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 186/520 (35%), Positives = 259/520 (49%), Gaps = 75/520 (14%)
Query: 29 EIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI 88
+I DL E KA + + E I +D+ T +YTSGTTG PKGVML H N++HQ
Sbjct: 149 KIYDLVEEG-KALRAKGSRKAEKRIEDIKPEDLFTLIYTSGTTGMPKGVMLMHSNMVHQ- 206
Query: 89 RSLYDIVPA-----ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRY 143
+ +VP + D LS+LP WH++ER Y SRGI+ YT V +LK+DL +
Sbjct: 207 --MVHVVPMLLTDIKTTDSMLSILPIWHIFERVNEYGAISRGIQTYYTKVSDLKNDLTKA 264
Query: 144 QPHYMISVPLVYETLYSGIQKQIF---TSSAARRVVARALIRISFAYTAFKRIYEGFCLT 200
+P +M S P V+E +Y+ I ++ + R+ + + S Y A +R G +
Sbjct: 265 KPSFMGSAPRVWENVYTNIYNKVNDPKQTPPLRKFLFKLAYFFSKHYNASRRFLSGLEVD 324
Query: 201 RNQKQ----------------------------------PSYLVALIDWLWARIICAILW 226
+ P+Y V L W + I L
Sbjct: 325 YENRNILKSIAIGTKSLIVLLLTGPFTLSAMTVLAYLALPTYGVHLPSWFFLMIAGLGLI 384
Query: 227 PLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVI 285
+ +V KI++A G K +SGGG+L H+D F+ IG+ V GYG+TE+SPVI
Sbjct: 385 FNAKTLDAVVLSKIRAATGGRLKGSLSGGGALQSHVDNFFNDIGMLVLEGYGMTETSPVI 444
Query: 286 AARRPTCNVLGSVGHPINHTEIKIVDAETN---------EVLPA--GSKGIVKVRGSQVM 334
+ R ++GSVG + +E+ I D N EVL G KGIV V+G QVM
Sbjct: 445 SVRPFAKPIIGSVGFLVPKSELMIKDENGNVLTHINDKFEVLAGKLGQKGIVFVKGPQVM 504
Query: 335 QGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGE 394
+GY+KNP TK+ + DGW+NTGDIG+I L L GRAKDT+VL GE
Sbjct: 505 KGYYKNPEVTKKTI-VDGWMNTGDIGFI----------NFKKTLTLTGRAKDTVVLLGGE 553
Query: 395 NVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK 454
NVEP+ +E S I+Q +VIGQD++ GAIIVPD E + + K I + EL K
Sbjct: 554 NVEPVPIENKMDESPFIKQSMVIGQDKKVLGAIIVPDMEHLTLWCKENGIDSSKIDELIK 613
Query: 455 E-KTISLLYGELRKWTS-KCSF----QIGPIHVVDEPFTV 488
K I E+R + S K F Q+ I + +PF V
Sbjct: 614 NPKVIEFYKKEVRNYNSTKTGFKSFEQVQHIILTKKPFEV 653
>gi|421124587|ref|ZP_15584844.1| AMP-binding enzyme [Leptospira interrogans serovar Grippotyphosa
str. 2006006986]
gi|421133743|ref|ZP_15593889.1| AMP-binding enzyme [Leptospira interrogans serovar Grippotyphosa
str. Andaman]
gi|410022188|gb|EKO88967.1| AMP-binding enzyme [Leptospira interrogans serovar Grippotyphosa
str. Andaman]
gi|410437718|gb|EKP86817.1| AMP-binding enzyme [Leptospira interrogans serovar Grippotyphosa
str. 2006006986]
Length = 683
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 190/541 (35%), Positives = 273/541 (50%), Gaps = 77/541 (14%)
Query: 5 ILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATY 64
I++ K SS + +I YD +++ GR R S + R E I +D+ T
Sbjct: 133 IIIMDKSSSAKGKNIHKI----YD-LVEEGRSLRAKGSKKAEKR----IEEIKPEDLFTL 183
Query: 65 VYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAE--NGDKFLSMLPPWHVYERACGYFIF 122
+YTSGTTG PKGVML H N++HQ+ + ++ E D LS+LP WH++ER Y
Sbjct: 184 IYTSGTTGMPKGVMLMHSNMIHQMVYVVPMLLTEIKPTDSMLSILPIWHIFERINEYGAI 243
Query: 123 SRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIF---TSSAARRVVARA 179
S GI+ YT V +L++DL + +P +M S P V+E +Y+ I ++ + RRV+ +
Sbjct: 244 SSGIQTYYTKVADLRNDLAKAKPSFMASAPRVWENVYANIYNKVNDPKQTPPIRRVLFKL 303
Query: 180 LIRISFAYTAFKRIYEGFCLTRNQKQ---------------------------------- 205
S Y A +R G + +
Sbjct: 304 AYFFSKHYNASRRFLNGLEVDYENRNIMKSLVIGIRSLIVLLLTGPFTLSAISILAYLTL 363
Query: 206 PSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLF 264
P Y + L +WL+ ++ L + +V KI++A G KA +SGGG+L H+D F
Sbjct: 364 PVYGIHLPNWLFFSLVGLGLVFNAKTLDTIVLSKIRAATGGRLKASLSGGGALQSHVDNF 423
Query: 265 YEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETN--------- 315
+ IG+ V GYG+TE+SPVI+ R ++GSVG + +E+ I D N
Sbjct: 424 FNDIGMLVLEGYGMTETSPVISVRPFVKPIIGSVGFLVPKSELIIKDENGNVLTHINDQY 483
Query: 316 EVLPA--GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRR 373
EVL G KGIV V+G QVM+GY+KNP TK+ + DGW+NTGDIG+I
Sbjct: 484 EVLAGKLGQKGIVFVKGPQVMKGYYKNPEVTKKTI-VDGWMNTGDIGFI----------N 532
Query: 374 CGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 433
L L GRAKDT+VL GENVEP+ +E S I+Q +VIGQDQ+ GAIIVPD E
Sbjct: 533 FKKTLTLTGRAKDTVVLLGGENVEPVPIENKMDESPFIKQSMVIGQDQKVLGAIIVPDME 592
Query: 434 EVLMAAKRLSIVHADASELSKE-KTISLLYGELRKWTS-KCSF----QIGPIHVVDEPFT 487
+ + K I + E+ K K I E+R + S K F Q+ + + +PF
Sbjct: 593 HLGVWCKENGIDSSKIDEIIKNPKVIDFYKKEVRSYNSTKTGFKSFEQVQHVILAKKPFE 652
Query: 488 V 488
V
Sbjct: 653 V 653
>gi|398340726|ref|ZP_10525429.1| long-chain-fatty-acid CoA ligase [Leptospira kirschneri serovar Bim
str. 1051]
gi|418678481|ref|ZP_13239755.1| AMP-binding enzyme [Leptospira kirschneri serovar Grippotyphosa
str. RM52]
gi|421088407|ref|ZP_15549232.1| AMP-binding enzyme [Leptospira kirschneri str. 200802841]
gi|421129505|ref|ZP_15589705.1| AMP-binding enzyme [Leptospira kirschneri str. 2008720114]
gi|400321671|gb|EJO69531.1| AMP-binding enzyme [Leptospira kirschneri serovar Grippotyphosa
str. RM52]
gi|410003038|gb|EKO53487.1| AMP-binding enzyme [Leptospira kirschneri str. 200802841]
gi|410358880|gb|EKP05989.1| AMP-binding enzyme [Leptospira kirschneri str. 2008720114]
Length = 683
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 195/546 (35%), Positives = 276/546 (50%), Gaps = 87/546 (15%)
Query: 5 ILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATY 64
I++ K SS + +I YD +I+ GR R S + R E I +D+ T
Sbjct: 133 IIIMDKSSSAKGKHIHKI----YD-LIEEGRSLRAKGSKKAEKR----IEEIKPEDLFTL 183
Query: 65 VYTSGTTGNPKGVMLTHKNLLHQIRS-----LYDIVPAENGDKFLSMLPPWHVYERACGY 119
+YTSGTTG PKGVML H N++HQ+ L DI P D LS+LP WH++ER Y
Sbjct: 184 IYTSGTTGMPKGVMLMHSNMIHQMVHVVPMLLTDIKPT---DSMLSILPIWHIFERVNEY 240
Query: 120 FIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIF---TSSAARRVV 176
S GI+ YT V +L++DL + +P +M S P V+E +Y+ I ++ + RR++
Sbjct: 241 GAISSGIQTYYTKVADLRNDLAKAKPSFMASAPRVWENVYANIYNKVNDPKQTPTIRRIL 300
Query: 177 ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLA---- 232
+ S Y A +R G L + + + L +L+ + + II + P L A
Sbjct: 301 FKLAYFFSKHYNASRRFLNG--LEVDYENRNILKSLVIGIKSLIILLLTGPFTLSAISIL 358
Query: 233 --------------------------------EKLVYKKIQSAIGIS-KAGVSGGGSLPM 259
+ +V KI++A G KA +SGGG+L
Sbjct: 359 AYLTIPVYGAHLPNWIFFSLAGLGLVFNAKTLDTIVLSKIRAATGGRLKASLSGGGALQS 418
Query: 260 HIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETN---- 315
H+D F+ IG+ V GYG+TE+SPVI+ R ++GSVG + +E+ I D N
Sbjct: 419 HVDNFFNDIGMLVLEGYGMTETSPVISVRPFVKPIIGSVGFLVPKSELIIKDENGNVLTH 478
Query: 316 -----EVLPA--GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSR 368
EVL G KGIV V+G QVM+GY+KNP TK+ + DGW+NTGDIG+I
Sbjct: 479 INDQFEVLAGKLGQKGIVFVKGPQVMKGYYKNPEVTKKTI-VDGWMNTGDIGFI------ 531
Query: 369 GRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAII 428
L L GRAKDT+VL GENVEP+ +E S I+Q +VIGQDQ+ GAII
Sbjct: 532 ----NFKKTLTLTGRAKDTVVLLGGENVEPVPIENKMDESPFIKQSMVIGQDQKVLGAII 587
Query: 429 VPDKEEVLMAAKRLSIVHADASELSKE-KTISLLYGELRKWTS-KCSF----QIGPIHVV 482
VPD E + + K I + E+ K K I E+R + S K F Q+ + +
Sbjct: 588 VPDIEHLSVWCKENGIDPSKTDEIIKNPKVIDFYKKEVRNYNSTKTGFKSFEQVQHVILA 647
Query: 483 DEPFTV 488
+PF V
Sbjct: 648 KKPFEV 653
>gi|374812610|ref|ZP_09716347.1| AMP-binding domain-containing protein [Treponema primitia ZAS-1]
Length = 636
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 163/476 (34%), Positives = 260/476 (54%), Gaps = 33/476 (6%)
Query: 22 IPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTH 81
I V + E+++LG K N + E +D+AT ++TSGTTG PKGVML+H
Sbjct: 152 IKVLGFGELLELG----KGRCSLNHGEIETEMEKGREEDLATIIFTSGTTGEPKGVMLSH 207
Query: 82 KNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIF--SRGIELMYTAVRNLKDD 139
N L Q S + + GD +LS+LP WHV+ER+ Y IF + GI L D
Sbjct: 208 NNFLVQQPSWRLVFEVKTGDIWLSVLPVWHVFERSIEYIIFYLNSGIAYSKPVSSILLAD 267
Query: 140 LQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCL 199
Q +PH+M+SVP V+E++ + + + + + Y F+ + G
Sbjct: 268 FQSIRPHWMVSVPRVWESIMDWSNRHVKKQGWIFKNGFEFFMTVGIMYNYFRDLTFG--- 324
Query: 200 TRNQKQPSY--LVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGS 256
+ P++ V L D+ + +L P+ L +V++ I+ +G KAG+SGGG+
Sbjct: 325 ----RIPNFHGRVRLFDFFMGILPLILLCPVQCLTALIVFQPIKKRLGGRFKAGLSGGGA 380
Query: 257 LPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNE 316
LP+ +DLF+ AIG+++Q GYGLTE++P++AARR +VG + +TE +IVD +T
Sbjct: 381 LPLKVDLFFNAIGIRLQEGYGLTEAAPIVAARRYKAPRRTTVGQLLLNTEARIVD-DTGT 439
Query: 317 VLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGG 376
+LP G G ++VRG QVMQGY++ P T +AL DGWL TGDI + +
Sbjct: 440 ILPPGHNGHLQVRGGQVMQGYYRKPELTAKALSPDGWLETGDIAMMTYDNE--------- 490
Query: 377 VLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVL 436
+ + GRAKDTIVL GENVEP+ +E S + +++GQ+Q+ A++VP +E ++
Sbjct: 491 -VRITGRAKDTIVLLGGENVEPVPIENKIRESPWVSHCMIVGQNQKYIAALVVPVQEALM 549
Query: 437 MAAKRLSIVHADASELSKEKTIS-LLYGELRKWTS-----KCSFQIGPIHVVDEPF 486
+ A+ +I D L ++ I+ L+ E+ + S K ++ + ++ +PF
Sbjct: 550 IFAEENNIPIVDYESLLQQAEINELISNEVSRLVSAQAGFKTYERVFKLKLIPKPF 605
>gi|455790029|gb|EMF41919.1| AMP-binding enzyme [Leptospira interrogans serovar Lora str. TE
1992]
Length = 683
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 190/541 (35%), Positives = 273/541 (50%), Gaps = 77/541 (14%)
Query: 5 ILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATY 64
I++ K SS + +I YD +++ GR R S + R E I +D+ T
Sbjct: 133 IIIMDKSSSAKGKNIHKI----YD-LVEEGRSLRAKGSKKAEKR----IEEIKPEDLFTL 183
Query: 65 VYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAE--NGDKFLSMLPPWHVYERACGYFIF 122
+YTSGTTG PKGVML H N++HQ+ + ++ E D LS+LP WH++ER Y
Sbjct: 184 IYTSGTTGMPKGVMLMHSNMIHQMVYVVPMLLTEIKPTDSMLSILPIWHIFERINEYGAI 243
Query: 123 SRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIF---TSSAARRVVARA 179
S GI+ YT V +L++DL + +P +M S P V+E +Y+ I ++ + RRV+ +
Sbjct: 244 SSGIQTYYTKVADLRNDLAKAKPSFMASAPRVWENVYANIYNKVNDPKQTPPIRRVLFKL 303
Query: 180 LIRISFAYTAFKRIYEGFCLTRNQKQ---------------------------------- 205
S Y A +R G + +
Sbjct: 304 AYFFSKHYNASRRFLNGLEVDYENRNIMKSLVIGIRSLIVLLLTGPFTLSAISILAYLTL 363
Query: 206 PSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLF 264
P Y + L +WL+ ++ L + +V KI++A G KA +SGGG+L H+D F
Sbjct: 364 PVYGIHLPNWLFFSLVGLGLVFNAKTLDTIVLSKIRAATGGRLKASLSGGGALQSHVDNF 423
Query: 265 YEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETN--------- 315
+ IG+ V GYG+TE+SPVI+ R ++GSVG + +E+ I D N
Sbjct: 424 FNDIGMLVLEGYGMTETSPVISVRPFVKPIIGSVGFLVPKSELIIKDENGNVLTHINDQY 483
Query: 316 EVLPA--GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRR 373
EVL G KGIV V+G QVM+GY+KNP TK+ + DGW+NTGDIG+I
Sbjct: 484 EVLAGKLGQKGIVFVKGPQVMKGYYKNPEVTKKTI-VDGWMNTGDIGFI----------N 532
Query: 374 CGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 433
L L GRAKDT+VL GENVEP+ +E S I+Q +VIGQDQ+ GAIIVPD E
Sbjct: 533 FKKTLTLTGRAKDTVVLLGGENVEPVPIENKMDESPFIKQSMVIGQDQKVLGAIIVPDME 592
Query: 434 EVLMAAKRLSIVHADASELSKE-KTISLLYGELRKWTS-KCSF----QIGPIHVVDEPFT 487
+ + K I + E+ K K I E+R + S K F Q+ + + +PF
Sbjct: 593 HLGVWCKENGIDSSKIDEIIKNPKVIDFYKKEVRSYNSTKTGFKSFEQVQHVILAKKPFE 652
Query: 488 V 488
V
Sbjct: 653 V 653
>gi|384107780|ref|ZP_10008678.1| Long-chain acyl-CoA synthetases (AMP-forming) [Treponema sp. JC4]
gi|383870636|gb|EID86238.1| Long-chain acyl-CoA synthetases (AMP-forming) [Treponema sp. JC4]
Length = 692
Score = 266 bits (679), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 166/444 (37%), Positives = 242/444 (54%), Gaps = 29/444 (6%)
Query: 24 VFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKN 83
++ YD+I+ +G+ R D + E I +D +A+ ++TSGTTG PKGV LTH N
Sbjct: 185 LYRYDQILKMGQLWRNEHPTIIDQQIR---EEISADQVASIIFTSGTTGVPKGVQLTHNN 241
Query: 84 LLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYT--AVRNLKDDLQ 141
L Q+ +L +I D+ + +LP WHVY+RA +++ L Y+ L D
Sbjct: 242 FLCQLPALSEIFDFHRADRSMCILPIWHVYQRAFEFYVMYFAGTLCYSKPVTSMLIQDFA 301
Query: 142 RYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTR 201
+ +P M VP V+E GI + I + A L ++ +A EG R
Sbjct: 302 KVRPQLMPCVPRVWE----GIYQAISKKIKKQSKTAWLLFKLLSNASANALTLEGKIKGR 357
Query: 202 NQ--KQPSYLVALIDWLW-ARIICAILWPLHLLAEKLVYKKIQSAIGISKA-GVSGGGSL 257
+ KQP+YL + LW +C L PL L KL +K I+ G A G+SGGG L
Sbjct: 358 HPLFKQPNYLQIGLSKLWYVPYVC--LLPLRALGNKLYFKNIREVTGGQFACGISGGGGL 415
Query: 258 PMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEV 317
P +D FY +IG++V YGLTE++PV+A+R+ V+G++G + + ++KI+D E +
Sbjct: 416 PPFLDRFYNSIGIRVVEAYGLTETAPVVASRKRFAPVMGTIGQALPYNQVKILDTEGKPM 475
Query: 318 LPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGV 377
P G KGI+ V+G VM+GY+K P T Q LD+DGW NTGD+ + G
Sbjct: 476 AP-GQKGILYVKGENVMKGYYKQPELTAQVLDQDGWFNTGDLAM----------QTVKGE 524
Query: 378 LVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLM 437
L+++GR KDTIVL +GENVEP +E S I +V+GQDQ GA+I+P E +
Sbjct: 525 LMIKGRQKDTIVLKSGENVEPFPIEAKLAESPYITTAIVVGQDQNSLGALIIPAVEAIRN 584
Query: 438 AAKRLSIVHADASELSKEKTISLL 461
AAK+ S H D E+ + T LL
Sbjct: 585 AAKQGS--HPD-EEIKIDNTQKLL 605
>gi|418693568|ref|ZP_13254618.1| AMP-binding enzyme [Leptospira kirschneri str. H1]
gi|421106608|ref|ZP_15567172.1| AMP-binding enzyme [Leptospira kirschneri str. H2]
gi|409958594|gb|EKO17485.1| AMP-binding enzyme [Leptospira kirschneri str. H1]
gi|410008074|gb|EKO61749.1| AMP-binding enzyme [Leptospira kirschneri str. H2]
Length = 683
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 192/544 (35%), Positives = 271/544 (49%), Gaps = 83/544 (15%)
Query: 5 ILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATY 64
I++ K SS + +I YD +I+ GR R S + R E I +D+ T
Sbjct: 133 IIIMDKSSSAKGKHIHKI----YD-LIEEGRSLRAKGSKKAEKR----IEEIKPEDLFTL 183
Query: 65 VYTSGTTGNPKGVMLTHKNLLHQIRS-----LYDIVPAENGDKFLSMLPPWHVYERACGY 119
+YTSGTTG PKGVML H N++HQ+ L DI P D LS+LP WH++ER Y
Sbjct: 184 IYTSGTTGMPKGVMLMHSNMIHQMVHVVPMLLTDIKPT---DSMLSILPIWHIFERVNEY 240
Query: 120 FIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIF---TSSAARRVV 176
S GI+ YT V +L++DL + +P +M S P V+E +Y+ I ++ + RR++
Sbjct: 241 GAISSGIQTYYTKVADLRNDLAKAKPSFMASAPRVWENVYANIYNKVNDPKQTPTIRRIL 300
Query: 177 ARALIRISFAYTAFKRIYEGFCLTRNQKQ------------------------------- 205
+ S Y A +R G + +
Sbjct: 301 FKLAYFFSKHYNASRRFLNGLEVDYENRNIFKSLVIGIKSLIILLLTGPFTLSAISILAY 360
Query: 206 ---PSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHI 261
P Y L +W++ + L + +V KI++A G KA +SGGG+L H+
Sbjct: 361 LTLPVYGARLPNWIFFSLAGLGLVFNAKTLDTIVLSKIRAATGGRLKASLSGGGALQSHV 420
Query: 262 DLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETN------ 315
D F+ IG+ V GYG+TE+SPVI+ R ++GSVG + +E+ I D N
Sbjct: 421 DNFFNDIGMLVLEGYGMTETSPVISVRPFVKPIIGSVGFLVPKSELIIKDENGNVLTHIN 480
Query: 316 ---EVLPA--GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGR 370
EVL G KGIV V+G QVM+GY+KNP TK+ + DGW+NTGDIG+I
Sbjct: 481 DQFEVLAGKLGQKGIVFVKGPQVMKGYYKNPEVTKKTI-VDGWMNTGDIGFI-------- 531
Query: 371 SRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVP 430
L L GRAKDT+VL GENVEP+ +E S I+Q +VIGQDQ+ GAIIVP
Sbjct: 532 --NFKKTLTLTGRAKDTVVLLGGENVEPVPIENKMDESPFIKQSMVIGQDQKVLGAIIVP 589
Query: 431 DKEEVLMAAKRLSIVHADASELSKE-KTISLLYGELRKWTS-KCSF----QIGPIHVVDE 484
D E + + K I + E+ K K I E+R + S K F Q+ + + +
Sbjct: 590 DIEHLSVWCKENGIDPSKTDEIIKNPKVIDFYKKEVRNYNSTKTGFKSFEQVQHVILAKK 649
Query: 485 PFTV 488
PF V
Sbjct: 650 PFEV 653
>gi|224004188|ref|XP_002295745.1| probable long-chain-fatty-acid--CoA ligase [Thalassiosira
pseudonana CCMP1335]
gi|209585777|gb|ACI64462.1| probable long-chain-fatty-acid--CoA ligase [Thalassiosira
pseudonana CCMP1335]
Length = 658
Score = 265 bits (677), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 157/395 (39%), Positives = 232/395 (58%), Gaps = 31/395 (7%)
Query: 51 YKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIR------SLYDIVPAENGDKFL 104
++ + DD+AT VYTSGTTG PKGVMLTH NLLHQI+ YD+ G+ +
Sbjct: 165 FQLPKLKKDDLATIVYTSGTTGRPKGVMLTHGNLLHQIQLRFAPTKKYDVSEPLPGEVMV 224
Query: 105 SMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQK 164
S+LP WH+ ERA IFSRG L+Y+ V++LK+DL ++PH+M+ VP V E + G++
Sbjct: 225 SILPVWHITERAAELCIFSRGCTLVYSNVKHLKNDLALHKPHWMMLVPRVLEKVALGVKD 284
Query: 165 QIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAI 224
+ + + ++ARA+I F A + + + R Q + L +++R + +
Sbjct: 285 KF----SKKNMIARAMIHF-FTLVASTK-SKLLKVARGQVIAAKKPNLFRRVFSRCLATL 338
Query: 225 LWPLHLLAEKLVYKKIQSAI-GISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSP 283
L PL + LV+ K+++A+ G K VSGG +L ++ FYE GV + VGYGLTE SP
Sbjct: 339 LTPLDAIGHALVWNKVKAALGGRQKLIVSGGSALNGSLEEFYETCGVLLIVGYGLTECSP 398
Query: 284 VIAARRPTCNVL--GSVGHPINHTEIKIVDAETN------EVLPAGSKGIVKVRGSQVMQ 335
+I RR N++ G VG P+ TEI++VD + G G+V +G QVM+
Sbjct: 399 LICHRRSDSNLVAGGCVGLPVTSTEIRVVDVNAKAGDAERTSIEKGQIGLVLAKGPQVMK 458
Query: 336 GYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGEN 395
GY+ N AT +++D+ GWL+TGD+G+I P + L + GRAKDTIVLS GEN
Sbjct: 459 GYYNNQKATNKSIDKYGWLDTGDLGYINPATND---------LFITGRAKDTIVLSNGEN 509
Query: 396 VEPLELEEAALRSSLIRQI-VVIGQDQRRPGAIIV 429
VEP LE+ L ++I Q+ + QD+++ AI V
Sbjct: 510 VEPSPLEDVLLGCNMIDQVTITTSQDEKQLHAIAV 544
>gi|333993405|ref|YP_004526018.1| long-chain-fatty-acid--CoA ligase [Treponema azotonutricium ZAS-9]
gi|333737141|gb|AEF83090.1| long-chain-fatty-acid--CoA ligase [Treponema azotonutricium ZAS-9]
Length = 644
Score = 265 bits (676), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 160/441 (36%), Positives = 246/441 (55%), Gaps = 24/441 (5%)
Query: 22 IPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTH 81
I ++SY E+++LG+ R+ + DA + DD T ++TSGTTG PKGVMLTH
Sbjct: 160 ITIYSYRELLNLGKNRREIYPGEVDA----EIAKGKGDDTVTVIFTSGTTGEPKGVMLTH 215
Query: 82 KNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN--LKDD 139
K L Q+ + + + G+ +LS+LP WHV+ERA Y + Y+ + L D
Sbjct: 216 KTFLCQVPRFHLVFDTKPGEIWLSVLPVWHVFERAIEYVALYHKNAIAYSKPISSVLMAD 275
Query: 140 LQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCL 199
+PH+M++VP V+E + GI + + + + Y F+ + G
Sbjct: 276 FANIKPHWMVAVPRVWEAVMDGIYRSVKLMGKFQEFFFNFFVSFGLMYAYFRDLAFGLIP 335
Query: 200 TRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLP 258
+ + V +D + +L P+ LA +V+++++ +G +AG+SGGG+LP
Sbjct: 336 NFHGR-----VRAVDAVLGFFPWLLLAPVRGLAYLIVFRRLKLRLGGRFRAGISGGGALP 390
Query: 259 MHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGH-PINHTEIKIVDAETNEV 317
+D F+ A+G+++Q GYGLTE+SP+++ R+ + G++G ++ TE +I+D + E
Sbjct: 391 ARVDHFFNAVGLRLQEGYGLTETSPIVSVRQYRKSRRGTIGQILVDDTEFRILDDKGRE- 449
Query: 318 LPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGV 377
LP GS GI+ VRG QVM+GY+K P T + L DGWLNTGDI H+R G
Sbjct: 450 LPPGSSGILYVRGPQVMKGYYKKPELTAEVLSADGWLNTGDIA----MHTR------DGE 499
Query: 378 LVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLM 437
L L GRAKDTIVL GENVEP+ +E S I Q VV+GQDQ+ A+IVP ++ V+
Sbjct: 500 LRLTGRAKDTIVLRGGENVEPVPIENKLKESPRIGQCVVLGQDQKYLAALIVPVQDAVMA 559
Query: 438 AAKRLSIVHADASELSKEKTI 458
A+ +I D L ++ I
Sbjct: 560 FAEENNIPIVDYELLLQQPEI 580
>gi|421099382|ref|ZP_15560036.1| AMP-binding enzyme [Leptospira borgpetersenii str. 200901122]
gi|410797584|gb|EKR99689.1| AMP-binding enzyme [Leptospira borgpetersenii str. 200901122]
Length = 683
Score = 265 bits (676), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 183/517 (35%), Positives = 258/517 (49%), Gaps = 69/517 (13%)
Query: 29 EIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI 88
+I DL E KA + + E I +D+ T +YTSGTTG PKGVML H N++HQ+
Sbjct: 149 KIYDLVEEG-KALRAKGSRKAEKRIEEIKPEDLFTLIYTSGTTGMPKGVMLMHSNMVHQM 207
Query: 89 RSLYDIVPAENG--DKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 146
+ ++ + D LS+LP WH++ER Y SRGI+ YT V +LK+DL + +P
Sbjct: 208 VHVVPMLLTDTKPTDSMLSILPIWHIFERVNEYGAISRGIQTYYTKVSDLKNDLTKAKPS 267
Query: 147 YMISVPLVYETLYSGIQKQIF---TSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQ 203
+M S P V+E +Y+ I ++ + R+ + + S Y A +R G +
Sbjct: 268 FMGSAPRVWENVYTNIYNKVNDPKQTPPLRKFLFKLAYFFSKHYNASRRFLNGLEVDYEN 327
Query: 204 KQ----------------------------------PSYLVALIDWLWARIICAILWPLH 229
+ P+Y V L W + I L
Sbjct: 328 RNILKSIAIGTKSLIVLLLTGPFTLSAMAILAYLALPTYGVRLPSWFFFMIAGLGLVFNA 387
Query: 230 LLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAAR 288
+ +V KI++A G K +SGGG+L H+D F+ IG+ V GYG+TE+SPVI+ R
Sbjct: 388 KTLDAVVLSKIRAATGGRLKGSLSGGGALQSHVDNFFNDIGMLVLEGYGMTETSPVISVR 447
Query: 289 RPTCNVLGSVGHPINHTEIKIVDAETN---------EVLPA--GSKGIVKVRGSQVMQGY 337
++GSVG + +E+ I D N EVL G KGIV V+G QVM+GY
Sbjct: 448 PFAKPIIGSVGFLVPKSELMIKDENGNVLTHINDKFEVLAGKLGQKGIVFVKGPQVMKGY 507
Query: 338 FKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVE 397
+KNP TK+ + DGW+NTGDIG+I L L GRAKDT+VL GENVE
Sbjct: 508 YKNPEVTKKTI-VDGWMNTGDIGFI----------NFKKTLTLTGRAKDTVVLLGGENVE 556
Query: 398 PLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE-K 456
P+ +E S I+Q +VIGQD++ GAIIVPD E + K I + EL K K
Sbjct: 557 PVPIENKMDESPFIKQSMVIGQDKKVLGAIIVPDMEHLTFWCKENGIDSSKIDELIKNPK 616
Query: 457 TISLLYGELRKWTS-KCSF----QIGPIHVVDEPFTV 488
I E+R + S K F Q+ + + +PF V
Sbjct: 617 VIEFYKKEVRNYNSTKTGFKSFEQVQHVILAKKPFEV 653
>gi|374317585|ref|YP_005064013.1| AMP-forming long-chain acyl-CoA synthetase [Sphaerochaeta
pleomorpha str. Grapes]
gi|359353229|gb|AEV31003.1| AMP-forming long-chain acyl-CoA synthetase [Sphaerochaeta
pleomorpha str. Grapes]
Length = 639
Score = 265 bits (676), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 173/449 (38%), Positives = 251/449 (55%), Gaps = 28/449 (6%)
Query: 21 EIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIG-SDDIATYVYTSGTTGNPKGVML 79
E+ +FS DL E R +DS R + G D++AT ++TSGTTG+PKGV+L
Sbjct: 155 EVLLFS-----DLLSEGRLLLNDSAQKRHIAEERKKGRGDEVATVIFTSGTTGDPKGVVL 209
Query: 80 THKNLLHQIRSLYDIVPA-ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN--L 136
TH+N Q+ L I+ G ++LS+LP WH +ER Y I S+ + Y+ L
Sbjct: 210 THENFAFQLEELPKIITRFAPGQRWLSVLPVWHSFERILQYTIVSQASAIAYSKPLGSIL 269
Query: 137 KDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEG 196
DLQ PH+M SVP ++E + +G+ + S + + + + ++ Y K + G
Sbjct: 270 LADLQAVNPHWMGSVPRIWEAVKAGVFGSMKNKSPVSQKLFKFFVSVANLYDTNKDLLVG 329
Query: 197 FCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGG 255
+ ++ ID L + + +L+PL+ L + LVY K++ +G + AGVSGGG
Sbjct: 330 DVPSFKKRN-----RFIDVLRSFLPTVLLFPLYKLGDHLVYAKVKEKLGKNFLAGVSGGG 384
Query: 256 SLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETN 315
SL +D F+ +IG+K+ GYGLTESSPVIA R ++ +V P+ +TE+KIVD N
Sbjct: 385 SLSESVDRFFSSIGIKLLDGYGLTESSPVIAVRYFDHSIKRTVS-PLGNTEVKIVDENGN 443
Query: 316 EVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCG 375
V P G KG++ VRG QVM+GY+K P T + L DGWLNTGD+G I H
Sbjct: 444 SVAP-GVKGLLMVRGKQVMKGYYKRPDLTAKVLSPDGWLNTGDLG-IWTHD--------- 492
Query: 376 GVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 435
G + GRAKDTIVLS GEN+EP+ +E +I Q VV+GQD + GA++V +K+ V
Sbjct: 493 GQFSIAGRAKDTIVLSGGENLEPVPIEAKLCECEMIEQAVVVGQDMKYLGALVVLNKKLV 552
Query: 436 LMAAKRLSIVHADASELSKEKTISLLYGE 464
I + S LSK K ++ L E
Sbjct: 553 EEYLTEQHIPYLSDS-LSKMKEVNELIAE 580
>gi|410941204|ref|ZP_11373003.1| AMP-binding enzyme [Leptospira noguchii str. 2006001870]
gi|410783763|gb|EKR72755.1| AMP-binding enzyme [Leptospira noguchii str. 2006001870]
Length = 682
Score = 264 bits (674), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 182/522 (34%), Positives = 272/522 (52%), Gaps = 74/522 (14%)
Query: 24 VFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKN 83
V E+I+ G+ R S + R I +D+ T +YTSGTTG PKGVML H N
Sbjct: 146 VLKMQELIERGKTLRAGGSKKAEER----IAAIHPEDLFTLIYTSGTTGLPKGVMLKHSN 201
Query: 84 LLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRY 143
++HQ+ + ++ + G + LS+LP WHV+ER Y G YT VR+L+ DL
Sbjct: 202 MMHQVNYVSPMLDIKVGARLLSILPIWHVFERVVEYVCIGLGAATYYTNVRDLRQDLATV 261
Query: 144 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFK----RIYEGFCL 199
+P +M S P ++E +Y+GI +I A + R L ++++ ++ K R +G +
Sbjct: 262 KPTFMGSAPRLWENIYNGIYTRI-NDPAQTPALRRGLFKLAYFFSRKKNQALRFLKGIEV 320
Query: 200 TRNQKQP--SY-----------------LVALIDWLWARIICAILW----PLHLLA---- 232
+ P S+ L L L A L+ PL++++
Sbjct: 321 DYTGRNPIVSFFYGILMFFQFLLTGPFTLTVLASALGAYFAGTELYFLTSPLYIVSGLAL 380
Query: 233 -------EKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPV 284
+K+V KI++A G KA +SGGG+LP H+D F+ IG+ V GYG+TE+SPV
Sbjct: 381 VLNSFTLDKIVLAKIRAATGGQLKASISGGGALPRHVDEFFGNIGINVLEGYGMTETSPV 440
Query: 285 IAARRPTCNVLGSVGHPINHTEIKIVDAETNEVL------------PAGSKGIVKVRGSQ 332
I+ R ++GSVG + T+++I + + N VL G KG+V ++G Q
Sbjct: 441 ISVRTFEKLIIGSVGVIVPKTKLQIRN-DNNAVLTEIDENGNIAQGKMGLKGVVFIKGPQ 499
Query: 333 VMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLST 392
VM+GYFKN AT +A+ DGW+NTGD+G I + L L GRAKDTIVL
Sbjct: 500 VMKGYFKNEEATSKAIT-DGWMNTGDMGMINFKKT----------LTLTGRAKDTIVLLG 548
Query: 393 GENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASEL 452
GENVEP+ +E S+ I Q +VIGQDQ+ GAI+VPD E++ AK + + +L
Sbjct: 549 GENVEPVPIENKLQESAYISQCMVIGQDQKNLGAIVVPDFEKLQEWAKENGVNETNNEKL 608
Query: 453 SKEKTISLLY-GELRKW-TSKCSF----QIGPIHVVDEPFTV 488
+ I LY E++ +K F Q+ P ++ +PF V
Sbjct: 609 IENPKIYDLYRKEIKALNNTKNGFKSFEQVTPFILISKPFEV 650
>gi|421087474|ref|ZP_15548310.1| AMP-binding enzyme [Leptospira santarosai str. HAI1594]
gi|421104138|ref|ZP_15564733.1| AMP-binding enzyme [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|410365590|gb|EKP20983.1| AMP-binding enzyme [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|410429723|gb|EKP74098.1| AMP-binding enzyme [Leptospira santarosai str. HAI1594]
Length = 683
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 189/541 (34%), Positives = 272/541 (50%), Gaps = 77/541 (14%)
Query: 5 ILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATY 64
I++ K SS + +I YD +++ GR R S + R E I +D+ T
Sbjct: 133 IIIMDKSSSAKGKNIHKI----YD-LVEEGRSLRAKGSKKAEKR----IEEIKPEDLFTL 183
Query: 65 VYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAE--NGDKFLSMLPPWHVYERACGYFIF 122
+YTSGTTG PKGVML H N++HQ+ + ++ E D LS+LP WH++ER Y
Sbjct: 184 IYTSGTTGMPKGVMLMHSNMIHQMVYVVPMLLTEIKPTDSMLSILPIWHIFERINEYGAI 243
Query: 123 SRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIF---TSSAARRVVARA 179
S GI+ YT V +L++DL + +P +M P V+E +Y+ I ++ + RRV+ +
Sbjct: 244 SSGIQTYYTKVADLRNDLAKAKPSFMAFAPRVWENVYANIYNKVNDPKQTPPIRRVLFKL 303
Query: 180 LIRISFAYTAFKRIYEGFCLTRNQKQ---------------------------------- 205
S Y A +R G + +
Sbjct: 304 AYFFSKHYNASRRFLNGLEVDYENRNIMKSLVIGIRSLIVLLLTGPFTLSAISILAYLTL 363
Query: 206 PSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLF 264
P Y + L +WL+ ++ L + +V KI++A G KA +SGGG+L H+D F
Sbjct: 364 PVYGIHLPNWLFFSLVGLGLVFNAKTLDTIVLSKIRAATGGRLKASLSGGGALQSHVDNF 423
Query: 265 YEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETN--------- 315
+ IG+ V GYG+TE+SPVI+ R ++GSVG + +E+ I D N
Sbjct: 424 FNDIGMLVLEGYGMTETSPVISVRPFVKPIIGSVGFLVPKSELIIKDENGNVLTHINDQY 483
Query: 316 EVLPA--GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRR 373
EVL G KGIV V+G QVM+GY+KNP TK+ + DGW+NTGDIG+I
Sbjct: 484 EVLAGKLGQKGIVFVKGPQVMKGYYKNPEVTKKTI-VDGWMNTGDIGFI----------N 532
Query: 374 CGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 433
L L GRAKDT+VL GENVEP+ +E S I+Q +VIGQDQ+ GAIIVPD E
Sbjct: 533 FKKTLTLTGRAKDTVVLLGGENVEPVPIENKMDESPFIKQSMVIGQDQKVLGAIIVPDME 592
Query: 434 EVLMAAKRLSIVHADASELSKE-KTISLLYGELRKWTS-KCSF----QIGPIHVVDEPFT 487
+ + K I + E+ K K I E+R + S K F Q+ + + +PF
Sbjct: 593 HLGVWCKENGIDSSKIDEIIKNPKVIDFYKKEVRSYNSTKTGFKSFEQVQHVILAKKPFE 652
Query: 488 V 488
V
Sbjct: 653 V 653
>gi|45656005|ref|YP_000091.1| long-chain-fatty-acid CoA ligase [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|45599238|gb|AAS68728.1| long-chain-fatty-acid CoA ligase [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
Length = 685
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 189/541 (34%), Positives = 272/541 (50%), Gaps = 77/541 (14%)
Query: 5 ILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATY 64
I++ K SS + +I YD +++ GR R S + R E I +D+ T
Sbjct: 135 IIIMDKSSSAKGKNIHKI----YD-LVEEGRSLRAKGSKKAEKR----IEEIKPEDLFTL 185
Query: 65 VYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAE--NGDKFLSMLPPWHVYERACGYFIF 122
+YTSGTTG PKGVML H N++HQ+ + ++ E D LS+LP WH++ER Y
Sbjct: 186 IYTSGTTGMPKGVMLMHSNMIHQMVYVVPMLLTEIKPTDSMLSILPIWHIFERINEYGAI 245
Query: 123 SRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIF---TSSAARRVVARA 179
S GI+ YT V +L++DL + +P +M P V+E +Y+ I ++ + RRV+ +
Sbjct: 246 SSGIQTYYTKVADLRNDLAKAKPSFMAFAPRVWENVYANIYNKVNDPKQTPPIRRVLFKL 305
Query: 180 LIRISFAYTAFKRIYEGFCLTRNQKQ---------------------------------- 205
S Y A +R G + +
Sbjct: 306 AYFFSKHYNASRRFLNGLEVDYENRNIMKSLVIGIRSLIVLLLTGPFTLSAISILAYLTL 365
Query: 206 PSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLF 264
P Y + L +WL+ ++ L + +V KI++A G KA +SGGG+L H+D F
Sbjct: 366 PVYGIHLPNWLFFSLVGLGLVFNAKTLDTIVLSKIRAATGGRLKASLSGGGALQSHVDNF 425
Query: 265 YEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETN--------- 315
+ IG+ V GYG+TE+SPVI+ R ++GSVG + +E+ I D N
Sbjct: 426 FNDIGMLVLEGYGMTETSPVISVRPFVKPIIGSVGFLVPKSELIIKDENGNVLTHINDQY 485
Query: 316 EVLPA--GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRR 373
EVL G KGIV V+G QVM+GY+KNP TK+ + DGW+NTGDIG+I
Sbjct: 486 EVLAGKLGQKGIVFVKGPQVMKGYYKNPEVTKKTI-VDGWMNTGDIGFI----------N 534
Query: 374 CGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 433
L L GRAKDT+VL GENVEP+ +E S I+Q +VIGQDQ+ GAIIVPD E
Sbjct: 535 FKKTLTLTGRAKDTVVLLGGENVEPVPIENKMDESPFIKQSMVIGQDQKVLGAIIVPDME 594
Query: 434 EVLMAAKRLSIVHADASELSKE-KTISLLYGELRKWTS-KCSF----QIGPIHVVDEPFT 487
+ + K I + E+ K K I E+R + S K F Q+ + + +PF
Sbjct: 595 HLGVWCKENGIDSSKIDEIIKNPKVIDFYKKEVRSYNSTKTGFKSFEQVQHVILAKKPFE 654
Query: 488 V 488
V
Sbjct: 655 V 655
>gi|456863005|gb|EMF81517.1| AMP-binding enzyme [Leptospira weilii serovar Topaz str. LT2116]
Length = 648
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 180/522 (34%), Positives = 272/522 (52%), Gaps = 74/522 (14%)
Query: 24 VFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKN 83
V ++I+ G++ R S + R I S+D+ T +YTSGTTG PKGVML H N
Sbjct: 112 VLKMQDLIEKGKKLRAGGSKKAEDR----ISAIDSEDLFTLIYTSGTTGLPKGVMLKHSN 167
Query: 84 LLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRY 143
++HQI+ + ++ + + LS+LP WHV+ER Y G YT VR+L+ DL
Sbjct: 168 MMHQIKYVSPMLDINSEARLLSILPIWHVFERVVEYVCIGLGAATYYTNVRDLRQDLATV 227
Query: 144 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFK----RIYEGFCL 199
+P +M S P ++E +Y+GI +I A R L R+++ ++ K R +G +
Sbjct: 228 KPTFMGSAPRLWENIYNGIYTRI-NDPAQTPAFRRGLFRLAYFFSRKKNQALRFLKGIEV 286
Query: 200 TRNQKQP--SYLVALIDWLWARI------------------------ICAILWPLHLLA- 232
+ P S+ ++ +L + + + L+ + LA
Sbjct: 287 DYTGRNPIGSFFYGILMFLQFLLTGPFTLTVFAGVLGVYFAGTELYYLTSFLYVIAGLAL 346
Query: 233 -------EKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPV 284
+K+V KI++A G KA +SGGG+LP H+D F+ IG+ V GYG+TE+SPV
Sbjct: 347 LLNSFTLDKIVLAKIRAATGGQLKASISGGGALPRHVDEFFGNIGINVLEGYGMTETSPV 406
Query: 285 IAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA------------GSKGIVKVRGSQ 332
I+ R ++GSVG T+++I + + N VL G KG+V V+G Q
Sbjct: 407 ISVRTFEKLIIGSVGVIAPKTKLQIRN-DNNAVLTEMDENGKITQGKLGLKGVVFVKGPQ 465
Query: 333 VMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLST 392
VM+GYFKN AT +A+ DGW+NTGD+G I + L L GRAKDTIVL
Sbjct: 466 VMKGYFKNEEATSKAI-TDGWMNTGDMGMINFKKT----------LTLTGRAKDTIVLLG 514
Query: 393 GENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASEL 452
GENVEP+ +E S+ I Q +VIGQDQ+ GAI+VPD E++ A+ I + +L
Sbjct: 515 GENVEPVPIENKLQESTYISQCMVIGQDQKNLGAIVVPDFEKLQEWAQENGINETNKDKL 574
Query: 453 SKEKTISLLY-GELRKW-TSKCSF----QIGPIHVVDEPFTV 488
+ + LY E++ +K F Q+ P ++ +PF V
Sbjct: 575 IENPKVYDLYRKEIKALNNTKNGFKSFEQVTPFILISKPFEV 616
>gi|418667893|ref|ZP_13229298.1| AMP-binding enzyme [Leptospira interrogans serovar Pyrogenes str.
2006006960]
gi|410756338|gb|EKR17963.1| AMP-binding enzyme [Leptospira interrogans serovar Pyrogenes str.
2006006960]
Length = 681
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 181/522 (34%), Positives = 271/522 (51%), Gaps = 74/522 (14%)
Query: 24 VFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKN 83
V E+I+ G+ R S + R I +D+ T +YTSGTTG PKGVML H N
Sbjct: 145 VLKMQELIEKGKALRAGGSKKAEER----IAAIDPEDLFTLIYTSGTTGLPKGVMLKHSN 200
Query: 84 LLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRY 143
++HQ+ + ++ + G + LS+LP WHV+ER Y G YT VR+L+ DL
Sbjct: 201 MMHQVNYVSPMLDIKAGARLLSILPIWHVFERVVEYVCIGLGAATYYTNVRDLRQDLATV 260
Query: 144 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFK----RIYEGFCL 199
+P +M S P ++E +Y+GI +I A + R L ++++ ++ K R +G +
Sbjct: 261 KPTFMGSAPRLWENIYNGIYTRI-NDPAQTPALRRGLFKLAYFFSRKKNQALRFLKGIEV 319
Query: 200 TRNQKQP--SY-----------------LVALIDWLWARIICAILW----PLHLLA---- 232
+ P S+ L L L A L+ P + +A
Sbjct: 320 DYTGRNPIVSFFYGILMFFQFLLTGPFTLTVLAGALGAYFAGTELYFLTSPFYTVAGLAL 379
Query: 233 -------EKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPV 284
+K+V KI++A G +A +SGGG+LP H+D F+ IG+ V GYG+TE+SPV
Sbjct: 380 VLNSFTLDKVVLAKIRAATGGQLEASISGGGALPRHVDEFFGNIGINVLEGYGMTETSPV 439
Query: 285 IAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLP------------AGSKGIVKVRGSQ 332
I+ R ++GSVG + T ++I + + N VL G KG+V ++G Q
Sbjct: 440 ISVRTFEKLIIGSVGVIVPKTRLQIRN-DNNAVLTEIDESGNITQGKMGLKGVVFIKGPQ 498
Query: 333 VMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLST 392
VM+GYFKN AT +A+ DGW+NTGD+G I + L L GRAKDT+VL
Sbjct: 499 VMKGYFKNEEATSKAIS-DGWMNTGDMGMINFKKT----------LTLTGRAKDTVVLLG 547
Query: 393 GENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASEL 452
GENVEP+++E S+ I Q +VIGQDQ+ GAI+VPD E++ AK I ++ +L
Sbjct: 548 GENVEPVQIENKLQESAYISQCMVIGQDQKNLGAIVVPDFEKLQEWAKENGINESNNEKL 607
Query: 453 SKEKTISLLY-GELRKW-TSKCSF----QIGPIHVVDEPFTV 488
+ I LY E++ +K F Q+ P ++ +PF V
Sbjct: 608 IENPKIYDLYRKEIKALNNTKNGFKSFEQVTPFILISKPFEV 649
>gi|187918016|ref|YP_001883579.1| long-chain-fatty-acid--CoA ligase [Borrelia hermsii DAH]
gi|119860864|gb|AAX16659.1| long-chain-fatty-acid--CoA ligase [Borrelia hermsii DAH]
Length = 631
Score = 263 bits (672), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 160/487 (32%), Positives = 269/487 (55%), Gaps = 53/487 (10%)
Query: 24 VFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKN 83
V++Y E I +G +SR+ D + I DD+AT +YTSGTTGNPKGVML+H N
Sbjct: 148 VYTYKECISIGDKSRR------DEEIIETFNNINPDDMATIIYTSGTTGNPKGVMLSHAN 201
Query: 84 LLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAV--RNLKDDLQ 141
L+Q+ S ++ G F+ +LP WH ++R+ Y IF +G+ +++++ RN+ DD++
Sbjct: 202 FLYQVSSFSRMISTSEGQIFMCILPIWHSFQRSFSYNIFLKGMTCLFSSIVPRNMLDDIK 261
Query: 142 RYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRI--------SFAYTAFKRI 193
PHY+ +VP L+ I++ IF A + +AR L ++ Y +
Sbjct: 262 NINPHYIAAVP----RLWIAIKQNIFKEVAKKPFLARLLFKVFVKAACLNDICYRIISGL 317
Query: 194 Y--EGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAG 250
Y GF L K+ ++ L+ IL+PL +L + +V+KKI+ +G + G
Sbjct: 318 YPDNGFDLLMPMKKILGILGLV----------ILFPLKILGDLIVFKKIKKVLGDNFVVG 367
Query: 251 VSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIV 310
++GGGS+ + + F+ +IG+++ YGLTE+SP +A+ +LG+ G + T +I
Sbjct: 368 ITGGGSMSLFVVRFFNSIGIELANAYGLTEASPGVASDEHGKIMLGTCGKILPGTVAEIR 427
Query: 311 DAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGR 370
D N++ G KG++ ++G QVM GY+++ AT+Q + +DG+LNTGDI ++ +
Sbjct: 428 DENGNKLKKPG-KGVLFIKGPQVMLGYYQDEDATRQVIGDDGFLNTGDIVKLSKDN---- 482
Query: 371 SRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVP 430
V+ + GR KDTIVL+ GEN+EP +E S LI + VV+GQDQ+ GA+I+P
Sbjct: 483 ------VVRIIGREKDTIVLNNGENIEPAPIEIKLEESLLIEKAVVVGQDQKFLGALILP 536
Query: 431 DKEEVLM----AAKRLSIVHADASELSKEKTISLLYGELRKWTSKCSF-----QIGPIHV 481
+ EE+ +++ H ++ + + E+RK +K + QI +
Sbjct: 537 NFEEINKYLESMGQKIFDAHNRQQIIANNIVLKAINDEIRKLINKANGFKPFEQILRFVL 596
Query: 482 VDEPFTV 488
+++PF V
Sbjct: 597 LEKPFEV 603
>gi|359726629|ref|ZP_09265325.1| long-chain-fatty-acid--CoA ligase [Leptospira weilii str.
2006001855]
Length = 681
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 179/522 (34%), Positives = 272/522 (52%), Gaps = 74/522 (14%)
Query: 24 VFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKN 83
V ++I+ G++ R S + R I S+D+ T +YTSGTTG PKGVML H N
Sbjct: 145 VLKMQDLIEKGKKLRAGGSKKAEDR----ISAIDSEDLFTLIYTSGTTGLPKGVMLKHSN 200
Query: 84 LLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRY 143
++HQI+ + ++ + + LS+LP WHV+ER Y G YT VR+L+ DL
Sbjct: 201 MMHQIKYVSPMLDINSEARLLSILPIWHVFERVVEYVCIGLGAATYYTNVRDLRQDLATV 260
Query: 144 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFK----RIYEGFCL 199
+P +M S P ++E +Y+GI +I A R L R+++ ++ K R +G +
Sbjct: 261 KPTFMGSAPRLWENIYNGIYTRI-NDPAQTPAFRRGLFRLAYFFSRKKNQALRFLKGIEV 319
Query: 200 TRNQKQP--SYLVALIDWLWARI------------------------ICAILWPLHLLA- 232
+ P S+ ++ +L + + + L+ + LA
Sbjct: 320 DYTGRNPIGSFFYGILMFLQFLLTGPFTLTVFAGVLGVYFAGTELYYLTSFLYVIAGLAL 379
Query: 233 -------EKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPV 284
+K+V KI++A G KA +SGGG+LP H+D F+ IG+ V GYG+TE+SPV
Sbjct: 380 LLNSFTLDKIVLAKIRAATGGQLKASISGGGALPRHVDEFFGNIGINVLEGYGMTETSPV 439
Query: 285 IAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA------------GSKGIVKVRGSQ 332
I+ R ++GSVG T+++I + + N VL G KG+V V+G Q
Sbjct: 440 ISVRTFEKLIIGSVGVIAPKTKLQIRN-DNNAVLTEMDENGKITQGKLGLKGVVFVKGPQ 498
Query: 333 VMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLST 392
VM+GYFKN AT +A+ DGW+NTGD+G I + L L GRAKDT+VL
Sbjct: 499 VMKGYFKNEEATSKAI-TDGWMNTGDMGMINFKKT----------LTLTGRAKDTVVLLG 547
Query: 393 GENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASEL 452
GENVEP+ +E S+ I Q +VIGQDQ+ GAI+VPD E++ A+ I + +L
Sbjct: 548 GENVEPVPIENKLQESTYISQCMVIGQDQKNLGAIVVPDFEKLQEWAQENGISETNKDKL 607
Query: 453 SKEKTISLLY-GELRKW-TSKCSF----QIGPIHVVDEPFTV 488
+ + LY E++ +K F Q+ P ++ +PF V
Sbjct: 608 IENPKVYDLYRKEIKALNNTKNGFKSFEQVTPFILISKPFEV 649
>gi|418696124|ref|ZP_13257133.1| AMP-binding enzyme [Leptospira kirschneri str. H1]
gi|409955653|gb|EKO14585.1| AMP-binding enzyme [Leptospira kirschneri str. H1]
Length = 682
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 180/522 (34%), Positives = 271/522 (51%), Gaps = 74/522 (14%)
Query: 24 VFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKN 83
V E+++ G+ R S + R I +D+ T +YTSGTTG PKGVML H N
Sbjct: 146 VLKMQELVEKGKSLRAGGSKKAEER----IAAIHPEDLFTLIYTSGTTGLPKGVMLKHSN 201
Query: 84 LLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRY 143
++HQ+ + ++ + G + LS+LP WHV+ER Y G YT VR+L+ DL
Sbjct: 202 MMHQVNYVSPMLNIKAGARLLSILPIWHVFERVVEYVCIGLGAATYYTNVRDLRQDLATV 261
Query: 144 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFK----RIYEGFCL 199
+P +M S P ++E +Y+GI +I A + R L ++++ ++ K R +G +
Sbjct: 262 KPTFMGSAPRLWENIYNGIYTRI-NDPAQTPALRRGLFKLAYFFSRKKNQALRFLKGIEV 320
Query: 200 TRNQKQP--SY-----------------LVALIDWLWARIICAILW----PLHLLA---- 232
+ P S+ L L L A L+ PL+ ++
Sbjct: 321 DYTGRNPIVSFFYGILMFFQFLLTGPFTLTVLAGALGAYFAGTELYFLTSPLYTVSGLAF 380
Query: 233 -------EKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPV 284
+K+V KI++A G KA +SGGG+LP H+D F+ IG+ V GYG+TE+SPV
Sbjct: 381 ILNSFTLDKIVLAKIRAATGGQLKASISGGGALPRHVDEFFGNIGINVLEGYGMTETSPV 440
Query: 285 IAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLP------------AGSKGIVKVRGSQ 332
I+ R ++GSVG + T ++I + + N VL G KG+V ++G Q
Sbjct: 441 ISVRTFEKLIIGSVGVIVPKTRLQIRN-DNNAVLTEVDESGNITQGKMGLKGVVFIKGPQ 499
Query: 333 VMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLST 392
VM+GYFKN AT +A+ DGW+NTGD+G I + L L GRAKDT+VL
Sbjct: 500 VMKGYFKNEEATSKAIS-DGWMNTGDMGMINFKKT----------LTLTGRAKDTVVLLG 548
Query: 393 GENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASEL 452
GENVEP+ +E S+ I Q +VIGQDQ+ GAI+VPD E++ AK I ++ +L
Sbjct: 549 GENVEPVPIENKLQESAYISQCMVIGQDQKNLGAIVVPDFEKLQEWAKENGINESNNEKL 608
Query: 453 SKEKTISLLY-GELRKW-TSKCSF----QIGPIHVVDEPFTV 488
+ + LY E++ +K F Q+ P ++ +PF V
Sbjct: 609 IENSKVYDLYRKEIKALNNTKNGFKSFEQVTPFILISKPFEV 650
>gi|398339044|ref|ZP_10523747.1| long-chain-fatty-acid CoA ligase [Leptospira kirschneri serovar Bim
str. 1051]
Length = 629
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 180/522 (34%), Positives = 271/522 (51%), Gaps = 74/522 (14%)
Query: 24 VFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKN 83
V E+++ G+ R S + R I +D+ T +YTSGTTG PKGVML H N
Sbjct: 93 VLKMQELLEKGKSLRAGGSKKAEER----IAAIHPEDLFTLIYTSGTTGLPKGVMLKHSN 148
Query: 84 LLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRY 143
++HQ+ + ++ + G + LS+LP WHV+ER Y G YT VR+L+ DL
Sbjct: 149 MMHQVNYVSPMLNIKAGARLLSILPIWHVFERVVEYVCIGLGAATYYTNVRDLRQDLATV 208
Query: 144 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFK----RIYEGFCL 199
+P +M S P ++E +Y+GI +I A + R L ++++ ++ K R +G +
Sbjct: 209 KPTFMGSAPRLWENIYNGIYTRI-NDPAQTPALRRGLFKLAYFFSRKKNQALRFLKGIEV 267
Query: 200 TRNQKQP--SY-----------------LVALIDWLWARIICAILW----PLHLLA---- 232
+ P S+ L L L A L+ PL+ ++
Sbjct: 268 DYTGRNPIVSFFYGILMFFQFLLTGPFTLTVLAGALGAYFAGTELYFLTSPLYTVSGLAF 327
Query: 233 -------EKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPV 284
+K+V KI++A G KA +SGGG+LP H+D F+ IG+ V GYG+TE+SPV
Sbjct: 328 VLNSFTLDKIVLAKIRAATGGQLKASISGGGALPRHVDEFFGNIGINVLEGYGMTETSPV 387
Query: 285 IAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLP------------AGSKGIVKVRGSQ 332
I+ R ++GSVG + T ++I + + N VL G KG+V ++G Q
Sbjct: 388 ISVRTFEKLIIGSVGVIVPKTRLQIRN-DNNAVLTEVDESGNITQGKMGLKGVVFIKGPQ 446
Query: 333 VMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLST 392
VM+GYFKN AT +A+ DGW+NTGD+G I + L L GRAKDT+VL
Sbjct: 447 VMKGYFKNEEATSKAIS-DGWMNTGDMGMINFKKT----------LTLTGRAKDTVVLLG 495
Query: 393 GENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASEL 452
GENVEP+ +E S+ I Q +VIGQDQ+ GAI+VPD E++ AK I ++ +L
Sbjct: 496 GENVEPVPIENKLQESAYISQCMVIGQDQKNLGAIVVPDFEKLQEWAKENGINESNNEKL 555
Query: 453 SKEKTISLLY-GELRKW-TSKCSF----QIGPIHVVDEPFTV 488
+ + LY E++ +K F Q+ P ++ +PF V
Sbjct: 556 IENSKVYDLYRKEIKALNNTKNGFKSFEQVTPFILISKPFEV 597
>gi|307719093|ref|YP_003874625.1| hypothetical protein STHERM_c14120 [Spirochaeta thermophila DSM
6192]
gi|306532818|gb|ADN02352.1| hypothetical protein STHERM_c14120 [Spirochaeta thermophila DSM
6192]
Length = 630
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 159/417 (38%), Positives = 235/417 (56%), Gaps = 23/417 (5%)
Query: 20 EEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVML 79
E + V S+ ++++ G ++ D A E + + +AT ++TSGTTG PKGVML
Sbjct: 147 EGLTVLSFHQLMERGAQALPGMRDHILA----AAEELPASTLATVIFTSGTTGLPKGVML 202
Query: 80 THKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAV--RNLK 137
+H N LHQ++ + ++ GD +LS+LP WH +ER Y S + Y+ R +
Sbjct: 203 SHGNFLHQVKGVPILLKVGPGDIWLSVLPVWHSFERMMQYVALSSASAIAYSKPIGRIML 262
Query: 138 DDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGF 197
D+ +P +M SVP ++E + GI + I + + +A + + AY F + +G
Sbjct: 263 QDMATLKPTWMASVPRIWEGIRKGILQTIKKEPPLVQAIFQASLVVGRAYAFFAHMVKG- 321
Query: 198 CLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGS 256
L R + +P ++D + I +LWP LA LV++K+ +G AG+SGGG+
Sbjct: 322 ELPRFRWRPR----ILDRMAGLIPFLLLWPFKQLAHLLVFRKLHRKLGGRFVAGISGGGA 377
Query: 257 LPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNE 316
LP +D F++AIG+ V GYGLTE++PV+A R V +VG TEI+I D E N
Sbjct: 378 LPPEVDGFFDAIGITVLEGYGLTEAAPVLAVRSYYHPVPHTVGPVFPDTEIQIRDEEGN- 436
Query: 317 VLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGG 376
VLP G +G V RG QVM GY K P T++ LDE+GWLNTGD+G + +
Sbjct: 437 VLPPGRQGTVFARGGQVMLGYLKAPEETRKVLDEEGWLNTGDLGMLTWDNE--------- 487
Query: 377 VLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 433
L + GRAKDTIVL GENVEP LE+A L+ +V+GQD++ GA+I D+E
Sbjct: 488 -LAITGRAKDTIVLRGGENVEPAPLEQALKEHPLVAHAMVVGQDEKYLGALIFVDQE 543
>gi|421109934|ref|ZP_15570441.1| AMP-binding enzyme [Leptospira kirschneri str. H2]
gi|410004961|gb|EKO58765.1| AMP-binding enzyme [Leptospira kirschneri str. H2]
Length = 681
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 180/522 (34%), Positives = 271/522 (51%), Gaps = 74/522 (14%)
Query: 24 VFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKN 83
V E+++ G+ R S + R I +D+ T +YTSGTTG PKGVML H N
Sbjct: 145 VLKMQELVEKGKSLRAGGSKKAEER----IAAIHPEDLFTLIYTSGTTGLPKGVMLKHSN 200
Query: 84 LLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRY 143
++HQ+ + ++ + G + LS+LP WHV+ER Y G YT VR+L+ DL
Sbjct: 201 MMHQVNYVSPMLNIKAGARLLSILPIWHVFERVVEYVCIGLGAATYYTNVRDLRQDLATV 260
Query: 144 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFK----RIYEGFCL 199
+P +M S P ++E +Y+GI +I A + R L ++++ ++ K R +G +
Sbjct: 261 KPTFMGSAPRLWENIYNGIYTRI-NDPAQTPALRRGLFKLAYFFSRKKNQALRFLKGIEV 319
Query: 200 TRNQKQP--SY-----------------LVALIDWLWARIICAILW----PLHLLA---- 232
+ P S+ L L L A L+ PL+ ++
Sbjct: 320 DYTGRNPIVSFFYGILMFFQFLLTGPFTLTVLAGALGAYFAGTELYFLTSPLYTVSGLAF 379
Query: 233 -------EKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPV 284
+K+V KI++A G KA +SGGG+LP H+D F+ IG+ V GYG+TE+SPV
Sbjct: 380 ILNSFTLDKIVLAKIRAATGGQLKASISGGGALPRHVDEFFGNIGINVLEGYGMTETSPV 439
Query: 285 IAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLP------------AGSKGIVKVRGSQ 332
I+ R ++GSVG + T ++I + + N VL G KG+V ++G Q
Sbjct: 440 ISVRTFEKLIIGSVGVIVPKTRLQIRN-DNNAVLTEVDESGNITQGKMGLKGVVFIKGPQ 498
Query: 333 VMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLST 392
VM+GYFKN AT +A+ DGW+NTGD+G I + L L GRAKDT+VL
Sbjct: 499 VMKGYFKNEEATSKAIS-DGWMNTGDMGMINFKKT----------LTLTGRAKDTVVLLG 547
Query: 393 GENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASEL 452
GENVEP+ +E S+ I Q +VIGQDQ+ GAI+VPD E++ AK I ++ +L
Sbjct: 548 GENVEPVPIENKLQESAYISQCMVIGQDQKNLGAIVVPDFEKLQEWAKENGINESNNEKL 607
Query: 453 SKEKTISLLY-GELRKW-TSKCSF----QIGPIHVVDEPFTV 488
+ + LY E++ +K F Q+ P ++ +PF V
Sbjct: 608 IENSKVYDLYRKEIKALNNTKNGFKSFEQVTPFILISKPFEV 649
>gi|418721482|ref|ZP_13280659.1| AMP-binding enzyme [Leptospira borgpetersenii str. UI 09149]
gi|418736583|ref|ZP_13292982.1| AMP-binding enzyme [Leptospira borgpetersenii serovar Castellonis
str. 200801910]
gi|410742174|gb|EKQ90924.1| AMP-binding enzyme [Leptospira borgpetersenii str. UI 09149]
gi|410747469|gb|EKR00374.1| AMP-binding enzyme [Leptospira borgpetersenii serovar Castellonis
str. 200801910]
Length = 681
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 178/522 (34%), Positives = 271/522 (51%), Gaps = 74/522 (14%)
Query: 24 VFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKN 83
V ++I+ G++ R S + R I S+D+ T +YTSGTTG PKGVML H N
Sbjct: 145 VLKMQDLIEKGKKLRTGGSRKAEER----VSAIDSEDLFTLIYTSGTTGLPKGVMLKHSN 200
Query: 84 LLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRY 143
++HQI+ + ++ + + LS+LP WHV+ER Y G YT VR+L+ DL
Sbjct: 201 MMHQIKYVSPMLDINSEARLLSILPIWHVFERVVEYVCIGLGAATYYTNVRDLRQDLATV 260
Query: 144 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFK----RIYEGFCL 199
+P +M S P ++E +Y+GI +I A R L R+++ ++ K R +G +
Sbjct: 261 KPTFMGSAPRLWENIYNGIYTRI-NDPAQTPAFRRGLFRLAYFFSRKKNQALRFLKGIEV 319
Query: 200 TRNQKQPSY-----LVALIDWL----------------------------WARIICAILW 226
+ P + ++ I +L + +I +
Sbjct: 320 DYTGRNPIWSFFYGILMFIQFLLTGPFTLTVFAGGLGAYFAGTELYYLTSFFYVIAGLAL 379
Query: 227 PLHLLA-EKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPV 284
L+ +K+V KI++A G KA +SGGG+LP H+D F+ IG+ V GYG+TE+SPV
Sbjct: 380 LLNSFTLDKIVLAKIRAATGGQLKASISGGGALPRHVDEFFGNIGINVLEGYGMTETSPV 439
Query: 285 IAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA------------GSKGIVKVRGSQ 332
I+ R ++GSVG T+++I ++ N VL G KG+V V+G Q
Sbjct: 440 ISVRTFEKLIIGSVGVIAPKTKLQI-RSDNNAVLTEMDENGKITQGKLGLKGVVFVKGPQ 498
Query: 333 VMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLST 392
VM+GYFKN AT +A+ DGW+NTGD+G I + L L GRAKDT+VL
Sbjct: 499 VMKGYFKNEEATSKAI-TDGWMNTGDMGMINFKKT----------LTLTGRAKDTVVLLG 547
Query: 393 GENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASEL 452
GENVEP+ +E S+ I Q +VIGQDQ+ GAI+VPD E++ A+ I+ + +L
Sbjct: 548 GENVEPVPIENKLQESTYISQCMVIGQDQKNLGAIVVPDFEKLQEWAQENGIIETNKDKL 607
Query: 453 SKEKTISLLY-GELRKW-TSKCSF----QIGPIHVVDEPFTV 488
+ + LY E++ +K F Q+ P ++ +PF V
Sbjct: 608 IENPRVYDLYRKEIKALNNTKNGFKSFEQVTPFILISKPFEV 649
>gi|418688201|ref|ZP_13249357.1| AMP-binding enzyme [Leptospira kirschneri serovar Grippotyphosa
str. Moskva]
gi|418739660|ref|ZP_13296041.1| AMP-binding enzyme [Leptospira kirschneri serovar Valbuzzi str.
200702274]
gi|410737058|gb|EKQ81800.1| AMP-binding enzyme [Leptospira kirschneri serovar Grippotyphosa
str. Moskva]
gi|410752782|gb|EKR09754.1| AMP-binding enzyme [Leptospira kirschneri serovar Valbuzzi str.
200702274]
Length = 682
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 180/522 (34%), Positives = 271/522 (51%), Gaps = 74/522 (14%)
Query: 24 VFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKN 83
V E+++ G+ R S + R I +D+ T +YTSGTTG PKGVML H N
Sbjct: 146 VLKMQELLEKGKSLRAGGSKKAEER----IAAIHPEDLFTLIYTSGTTGLPKGVMLKHSN 201
Query: 84 LLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRY 143
++HQ+ + ++ + G + LS+LP WHV+ER Y G YT VR+L+ DL
Sbjct: 202 MMHQVNYVSPMLNIKAGARLLSILPIWHVFERVVEYVCIGLGAATYYTNVRDLRQDLATV 261
Query: 144 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFK----RIYEGFCL 199
+P +M S P ++E +Y+GI +I A + R L ++++ ++ K R +G +
Sbjct: 262 KPTFMGSAPRLWENIYNGIYTRI-NDPAQTPALRRGLFKLAYFFSRKKNQALRFLKGIEV 320
Query: 200 TRNQKQP--SY-----------------LVALIDWLWARIICAILW----PLHLLA---- 232
+ P S+ L L L A L+ PL+ ++
Sbjct: 321 DYTGRNPIVSFFYGILMFFQFLLTGPFTLTVLAGALGAYFAGTELYFLTSPLYTVSGLAF 380
Query: 233 -------EKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPV 284
+K+V KI++A G KA +SGGG+LP H+D F+ IG+ V GYG+TE+SPV
Sbjct: 381 VLNSFALDKIVLAKIRAATGGQLKASISGGGALPRHVDEFFGNIGINVLEGYGMTETSPV 440
Query: 285 IAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLP------------AGSKGIVKVRGSQ 332
I+ R ++GSVG + T ++I + + N VL G KG+V ++G Q
Sbjct: 441 ISVRTFEKLIIGSVGVIVPKTRLQIRN-DNNAVLTEVDESGNITQGKMGLKGVVFIKGPQ 499
Query: 333 VMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLST 392
VM+GYFKN AT +A+ DGW+NTGD+G I + L L GRAKDT+VL
Sbjct: 500 VMKGYFKNEEATSKAIS-DGWMNTGDMGMINFKKT----------LTLTGRAKDTVVLLG 548
Query: 393 GENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASEL 452
GENVEP+ +E S+ I Q +VIGQDQ+ GAI+VPD E++ AK I ++ +L
Sbjct: 549 GENVEPVPIENKLQESAYISQCMVIGQDQKNLGAIVVPDFEKLQEWAKENGINESNNEKL 608
Query: 453 SKEKTISLLY-GELRKW-TSKCSF----QIGPIHVVDEPFTV 488
+ + LY E++ +K F Q+ P ++ +PF V
Sbjct: 609 IENSKVYDLYRKEIKALNNTKNGFKSFEQVTPFILISKPFEV 650
>gi|421089079|ref|ZP_15549894.1| AMP-binding enzyme [Leptospira kirschneri str. 200802841]
gi|410002200|gb|EKO52722.1| AMP-binding enzyme [Leptospira kirschneri str. 200802841]
Length = 682
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 180/522 (34%), Positives = 271/522 (51%), Gaps = 74/522 (14%)
Query: 24 VFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKN 83
V E+++ G+ R S + R I +D+ T +YTSGTTG PKGVML H N
Sbjct: 146 VLKMQELLEKGKSLRAGGSKKAEER----IAAIHPEDLFTLIYTSGTTGLPKGVMLKHSN 201
Query: 84 LLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRY 143
++HQ+ + ++ + G + LS+LP WHV+ER Y G YT VR+L+ DL
Sbjct: 202 MMHQVNYVSPMLNIKAGARLLSILPIWHVFERVVEYVCIGLGAATYYTNVRDLRQDLATV 261
Query: 144 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFK----RIYEGFCL 199
+P +M S P ++E +Y+GI +I A + R L ++++ ++ K R +G +
Sbjct: 262 KPTFMGSAPRLWENIYNGIYTRI-NDPAQTPALRRGLFKLAYFFSRKKNQALRFLKGIEV 320
Query: 200 TRNQKQP--SY-----------------LVALIDWLWARIICAILW----PLHLLA---- 232
+ P S+ L L L A L+ PL+ ++
Sbjct: 321 DYTGRNPIVSFFYGILMFFQFLLTGPFTLTVLAGALGAYFAGTELYFLTSPLYTVSGLAF 380
Query: 233 -------EKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPV 284
+K+V KI++A G KA +SGGG+LP H+D F+ IG+ V GYG+TE+SPV
Sbjct: 381 VLNSFTLDKIVLAKIRAATGGQLKASISGGGALPRHVDEFFGNIGINVLEGYGMTETSPV 440
Query: 285 IAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLP------------AGSKGIVKVRGSQ 332
I+ R ++GSVG + T ++I + + N VL G KG+V ++G Q
Sbjct: 441 ISVRTFEKLIIGSVGVIVPKTRLQIRN-DNNAVLTEVDESGNITQGKMGLKGVVFIKGPQ 499
Query: 333 VMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLST 392
VM+GYFKN AT +A+ DGW+NTGD+G I + L L GRAKDT+VL
Sbjct: 500 VMKGYFKNEEATSKAIS-DGWMNTGDMGMINFKKT----------LTLTGRAKDTVVLLG 548
Query: 393 GENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASEL 452
GENVEP+ +E S+ I Q +VIGQDQ+ GAI+VPD E++ AK I ++ +L
Sbjct: 549 GENVEPVPIENKLQESAYISQCMVIGQDQKNLGAIVVPDFEKLQEWAKENGINESNNEKL 608
Query: 453 SKEKTISLLY-GELRKW-TSKCSF----QIGPIHVVDEPFTV 488
+ + LY E++ +K F Q+ P ++ +PF V
Sbjct: 609 IENSKVYDLYRKEIKALNNTKNGFKSFEQVTPFILISKPFEV 650
>gi|421130910|ref|ZP_15591101.1| AMP-binding enzyme [Leptospira kirschneri str. 2008720114]
gi|410357714|gb|EKP04934.1| AMP-binding enzyme [Leptospira kirschneri str. 2008720114]
Length = 682
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 180/522 (34%), Positives = 271/522 (51%), Gaps = 74/522 (14%)
Query: 24 VFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKN 83
V E+++ G+ R S + R I +D+ T +YTSGTTG PKGVML H N
Sbjct: 146 VLKMQELLEKGKSLRAGGSKKAEER----IAAIHPEDLFTLIYTSGTTGLPKGVMLKHSN 201
Query: 84 LLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRY 143
++HQ+ + ++ + G + LS+LP WHV+ER Y G YT VR+L+ DL
Sbjct: 202 MMHQVNYVSPMLNIKAGARLLSILPIWHVFERVVEYVCIGLGAATYYTNVRDLRQDLATV 261
Query: 144 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFK----RIYEGFCL 199
+P +M S P ++E +Y+GI +I A + R L ++++ ++ K R +G +
Sbjct: 262 KPTFMGSAPRLWENIYNGIYTRI-NDPAQTPALRRGLFKLAYFFSRKKNQALRFLKGIEV 320
Query: 200 TRNQKQP--SY-----------------LVALIDWLWARIICAILW----PLHLLA---- 232
+ P S+ L L L A L+ PL+ ++
Sbjct: 321 DYTGRNPIVSFFYGILMFFQFLLTGPFTLTVLAGALGAYFAGTELYFLTSPLYTVSGLAF 380
Query: 233 -------EKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPV 284
+K+V KI++A G KA +SGGG+LP H+D F+ IG+ V GYG+TE+SPV
Sbjct: 381 VLNSFALDKIVLAKIRAATGGQLKASISGGGALPRHVDEFFGNIGINVLEGYGMTETSPV 440
Query: 285 IAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLP------------AGSKGIVKVRGSQ 332
I+ R ++GSVG + T ++I + + N VL G KG+V ++G Q
Sbjct: 441 ISVRTFEKLIIGSVGVIVPKTRLQIRN-DNNAVLTEVDESGNITQGKMGLKGVVFIKGPQ 499
Query: 333 VMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLST 392
VM+GYFKN AT +A+ DGW+NTGD+G I + L L GRAKDT+VL
Sbjct: 500 VMKGYFKNEEATSKAIS-DGWMNTGDMGMINFKKT----------LTLTGRAKDTVVLLG 548
Query: 393 GENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASEL 452
GENVEP+ +E S+ I Q +VIGQDQ+ GAI+VPD E++ AK I ++ +L
Sbjct: 549 GENVEPVPIENKLQESAYISQCMVIGQDQKNLGAIVVPDFEKLQEWAKENGINESNNEKL 608
Query: 453 SKEKTISLLY-GELRKW-TSKCSF----QIGPIHVVDEPFTV 488
+ + LY E++ +K F Q+ P ++ +PF V
Sbjct: 609 IENSKVYDLYRKEIKALNNTKNGFKSFEQVTPFILISKPFEV 650
>gi|456986311|gb|EMG21907.1| AMP-binding enzyme [Leptospira interrogans serovar Copenhageni str.
LT2050]
Length = 646
Score = 262 bits (670), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 181/522 (34%), Positives = 270/522 (51%), Gaps = 74/522 (14%)
Query: 24 VFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKN 83
V E+I+ G+ R S + R I +D+ T +YTSGTTG PKGVML H N
Sbjct: 107 VLKMQELIEKGKALRAGGSKKAEER----ITAIDPEDLFTLIYTSGTTGLPKGVMLKHSN 162
Query: 84 LLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRY 143
++HQ+ + ++ + G + LS+LP WHV+ER Y G YT VR+L+ DL
Sbjct: 163 MMHQVNYVSPMLDIKAGARLLSILPIWHVFERVVEYVCIGLGAATYYTNVRDLRQDLATV 222
Query: 144 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFK----RIYEGFCL 199
+P +M S P ++E +Y+GI +I A + R L ++++ ++ K R +G +
Sbjct: 223 KPTFMGSAPRLWENIYNGIYTRI-NDPAQTPALRRGLFKLAYFFSRKKNQALRFLKGIEV 281
Query: 200 TRNQKQP--SY-----------------LVALIDWLWARIICAILW----PLHLLA---- 232
+ P S+ L L L A L+ P + +A
Sbjct: 282 DYTGRNPIVSFFYGILMFFQFLLTGPFTLTVLAGALGAYFAGTELYFLTSPFYTVAGLAL 341
Query: 233 -------EKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPV 284
+K+V KI++A G +A +SGGG+LP H+D F+ IG+ V GYG+TE+SPV
Sbjct: 342 VLNSFTLDKVVLAKIRAATGGQLEASISGGGALPRHVDEFFGNIGINVLEGYGMTETSPV 401
Query: 285 IAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLP------------AGSKGIVKVRGSQ 332
I+ R ++GSVG + T ++I + + N VL G KG+V ++G Q
Sbjct: 402 ISVRTFEKLIIGSVGVIVPKTRLQIRN-DNNAVLTEIDESGNITQGKMGLKGVVFIKGPQ 460
Query: 333 VMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLST 392
VM+GYFKN AT +A+ DGW+NTGD+G I + L L GRAKDT+VL
Sbjct: 461 VMKGYFKNEEATSKAIS-DGWMNTGDMGMINFKKT----------LTLTGRAKDTVVLLG 509
Query: 393 GENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASEL 452
GENVEP+ +E S+ I Q +VIGQDQ+ GAI+VPD E++ AK I ++ +L
Sbjct: 510 GENVEPVPIENKLQESAYISQCMVIGQDQKNLGAIVVPDFEKLQEWAKENGINESNNEKL 569
Query: 453 SKEKTISLLY-GELRKW-TSKCSF----QIGPIHVVDEPFTV 488
+ I LY E++ +K F Q+ P ++ +PF V
Sbjct: 570 IENPKIYDLYRKEIKALNNTKNGFKSFEQVTPFILISKPFEV 611
>gi|456821979|gb|EMF70485.1| AMP-binding enzyme [Leptospira interrogans serovar Canicola str.
LT1962]
Length = 643
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 181/522 (34%), Positives = 270/522 (51%), Gaps = 74/522 (14%)
Query: 24 VFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKN 83
V E+I+ G+ R S + R I +D+ T +YTSGTTG PKGVML H N
Sbjct: 107 VLKMQELIEKGKALRAGGSKKAEER----IAAIDPEDLFTLIYTSGTTGLPKGVMLKHSN 162
Query: 84 LLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRY 143
++HQ+ + ++ + G + LS+LP WHV+ER Y G YT VR+L+ DL
Sbjct: 163 MMHQVNYVSPMLDIKAGARLLSILPIWHVFERVVEYVCIGLGAATYYTNVRDLRQDLATV 222
Query: 144 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFK----RIYEGFCL 199
+P +M S P ++E +Y+GI +I A + R L ++++ ++ K R +G +
Sbjct: 223 KPTFMGSAPRLWENIYNGIYTRI-NDPAQTPALRRGLFKLAYFFSRKKNQALRFLKGIEV 281
Query: 200 TRNQKQP--SY-----------------LVALIDWLWARIICAILW----PLHLLA---- 232
+ P S+ L L L A L+ P + +A
Sbjct: 282 DYTGRNPIVSFFYGILMFFQFLLTGPFTLTVLAGALGAYFAGTELYFLTSPFYTVAGLAL 341
Query: 233 -------EKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPV 284
+K+V KI++A G +A +SGGG+LP H+D F+ IG+ V GYG+TE+SPV
Sbjct: 342 VLNSFTLDKVVLAKIRAATGGQLEASISGGGALPRHVDEFFGNIGINVLEGYGMTETSPV 401
Query: 285 IAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLP------------AGSKGIVKVRGSQ 332
I+ R ++GSVG + T ++I + + N VL G KG+V ++G Q
Sbjct: 402 ISVRTFEKLIIGSVGVIVPKTRLQIRN-DNNAVLTEIDESGNITQGKMGLKGVVFIKGPQ 460
Query: 333 VMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLST 392
VM+GYFKN AT +A+ DGW+NTGD+G I + L L GRAKDT+VL
Sbjct: 461 VMKGYFKNEEATSKAIS-DGWMNTGDMGMINFKKT----------LTLTGRAKDTVVLLG 509
Query: 393 GENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASEL 452
GENVEP+ +E S+ I Q +VIGQDQ+ GAI+VPD E++ AK I ++ +L
Sbjct: 510 GENVEPVPIENKLQESAYISQCMVIGQDQKNLGAIVVPDFEKLQEWAKENGINESNNEKL 569
Query: 453 SKEKTISLLY-GELRKW-TSKCSF----QIGPIHVVDEPFTV 488
+ I LY E++ +K F Q+ P ++ +PF V
Sbjct: 570 IENPKIYDLYRKEIKALNNTKNGFKSFEQVTPFILISKPFEV 611
>gi|417777979|ref|ZP_12425791.1| AMP-binding enzyme [Leptospira weilii str. 2006001853]
gi|410781949|gb|EKR66516.1| AMP-binding enzyme [Leptospira weilii str. 2006001853]
Length = 682
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 177/522 (33%), Positives = 271/522 (51%), Gaps = 74/522 (14%)
Query: 24 VFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKN 83
V ++I+ G++ R S + R I S+D+ T +YTSGTTG PKGVML H N
Sbjct: 146 VLKMQDLIEKGKKLRAGGSKKAEDR----ISAIDSEDLFTLIYTSGTTGLPKGVMLKHSN 201
Query: 84 LLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRY 143
++HQI+ + ++ + + LS+LP WHV+ER Y G YT VR+L+ DL
Sbjct: 202 MMHQIKYVSPMLDINSEARLLSILPIWHVFERVVEYVCIGLGAATYYTNVRDLRQDLATV 261
Query: 144 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFK----RIYEGFCL 199
+P +M S P ++E +Y+GI +I A R L R+++ ++ K R +G +
Sbjct: 262 KPTFMGSAPRLWENIYNGIYTRI-NDPAQTPAFRRGLFRLAYFFSRKKNQALRFLKGIEV 320
Query: 200 TRNQKQP--SYLVALIDWL-------------------------------WARIICAILW 226
+ P S+ ++ ++ + +I + +
Sbjct: 321 DYTGRNPIGSFFYGILMFVQFLLTGPFTLTVFAGVLGVYFAGTELYYLTSFLYVIAGLAF 380
Query: 227 PLHLLA-EKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPV 284
L+ +K+V KI++A G KA +SGGG+LP H+D F+ IG+ V GYG+TE+SPV
Sbjct: 381 LLNSFTLDKIVLAKIRAATGGQLKASISGGGALPRHVDEFFGNIGINVLEGYGMTETSPV 440
Query: 285 IAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA------------GSKGIVKVRGSQ 332
I+ R ++GSVG T+++I + + N VL G KG+V V+G Q
Sbjct: 441 ISVRTFEKLIIGSVGVIAPKTKLQIRN-DNNAVLTEMDENGKITQGKLGLKGVVFVKGPQ 499
Query: 333 VMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLST 392
VM+GYFKN AT +A+ DGW+NTGD+G I + L L GRAKDT+VL
Sbjct: 500 VMKGYFKNEEATSKAI-TDGWMNTGDMGMINFKKT----------LTLTGRAKDTVVLLG 548
Query: 393 GENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASEL 452
GENVEP+ +E S+ I Q +VIGQDQ+ GAI+VPD E++ A+ I + +L
Sbjct: 549 GENVEPVPIENKLQESTYISQCMVIGQDQKNLGAIVVPDFEKLQEWAQENGISETNKDKL 608
Query: 453 SKEKTISLLY-GELRKW-TSKCSF----QIGPIHVVDEPFTV 488
+ + LY E++ +K F Q+ P ++ +PF V
Sbjct: 609 IENPKVYDLYRKEIKALNNTKNGFKSFEQVTPFILISKPFEV 650
>gi|421096224|ref|ZP_15556931.1| AMP-binding enzyme [Leptospira borgpetersenii str. 200801926]
gi|410361125|gb|EKP12171.1| AMP-binding enzyme [Leptospira borgpetersenii str. 200801926]
Length = 681
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 178/522 (34%), Positives = 270/522 (51%), Gaps = 74/522 (14%)
Query: 24 VFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKN 83
V ++I+ G++ R S + R I S+D+ T +YTSGTTG PKGVML H N
Sbjct: 145 VLKMQDLIEKGKKLRTGGSRKAEER----VSAIDSEDLFTLIYTSGTTGLPKGVMLKHSN 200
Query: 84 LLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRY 143
++HQI+ + ++ + + LS+LP WHV+ER Y G YT VR+L+ DL
Sbjct: 201 MMHQIKYVSPMLDINSEARLLSILPIWHVFERVVEYVCIGLGAATYYTNVRDLRQDLATV 260
Query: 144 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFK----RIYEGFCL 199
+P +M S P ++E +Y+GI +I A R L R+++ ++ K R +G +
Sbjct: 261 KPTFMGSAPRLWENIYNGIYTRI-NDPAQTPAFRRGLFRLAYFFSRKKNQALRFLKGIEV 319
Query: 200 TRNQKQPSY-----LVALIDWL----------------------------WARIICAILW 226
+ P + ++ I +L + +I +
Sbjct: 320 DYTGRNPIWSFFYGILMFIQFLLTGPFTLTVFAGGLGAYFAGTELYYLTSFFYVIAGLAL 379
Query: 227 PLHLLA-EKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPV 284
L+ +K+V KI++A G KA +SGGG LP H+D F+ IG+ V GYG+TE+SPV
Sbjct: 380 LLNSFTLDKIVLAKIRAATGGQLKASISGGGGLPRHVDEFFGNIGINVLEGYGMTETSPV 439
Query: 285 IAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA------------GSKGIVKVRGSQ 332
I+ R ++GSVG T+++I ++ N VL G KG+V V+G Q
Sbjct: 440 ISVRTFEKLIIGSVGVIAPKTKLQI-RSDNNAVLTEMDENGKITQGKLGLKGVVFVKGPQ 498
Query: 333 VMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLST 392
VM+GYFKN AT +A+ DGW+NTGD+G I + L L GRAKDT+VL
Sbjct: 499 VMKGYFKNEEATSKAI-TDGWMNTGDMGMINFKKT----------LTLTGRAKDTVVLLG 547
Query: 393 GENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASEL 452
GENVEP+ +E S+ I Q +VIGQDQ+ GAI+VPD E++ A+ I+ + +L
Sbjct: 548 GENVEPVPIENKLQESTYISQCMVIGQDQKNLGAIVVPDFEKLQEWAQENGIIETNKDKL 607
Query: 453 SKEKTISLLY-GELRKW-TSKCSF----QIGPIHVVDEPFTV 488
+ + LY E++ +K F Q+ P ++ +PF V
Sbjct: 608 IENPRVYDLYRKEIKALNNTKNGFKSFEQVTPFILISKPFEV 649
>gi|24215009|ref|NP_712490.1| long-chain-fatty-acid CoA ligase [Leptospira interrogans serovar
Lai str. 56601]
gi|417762662|ref|ZP_12410650.1| AMP-binding enzyme [Leptospira interrogans str. 2002000624]
gi|417772209|ref|ZP_12420098.1| AMP-binding enzyme [Leptospira interrogans serovar Pomona str.
Pomona]
gi|417777581|ref|ZP_12425398.1| AMP-binding enzyme [Leptospira interrogans str. 2002000621]
gi|418671706|ref|ZP_13233055.1| AMP-binding enzyme [Leptospira interrogans str. 2002000623]
gi|418680951|ref|ZP_13242188.1| AMP-binding enzyme [Leptospira interrogans serovar Pomona str.
Kennewicki LC82-25]
gi|418692704|ref|ZP_13253782.1| AMP-binding enzyme [Leptospira interrogans str. FPW2026]
gi|418704164|ref|ZP_13265043.1| AMP-binding enzyme [Leptospira interrogans serovar Hebdomadis str.
R499]
gi|418730633|ref|ZP_13289127.1| AMP-binding enzyme [Leptospira interrogans str. UI 12758]
gi|421120870|ref|ZP_15581175.1| AMP-binding enzyme [Leptospira interrogans str. Brem 329]
gi|24196054|gb|AAN49508.1|AE011400_13 long-chain-fatty-acid CoA ligase [Leptospira interrogans serovar
Lai str. 56601]
gi|400327389|gb|EJO79641.1| AMP-binding enzyme [Leptospira interrogans serovar Pomona str.
Kennewicki LC82-25]
gi|400357937|gb|EJP14057.1| AMP-binding enzyme [Leptospira interrogans str. FPW2026]
gi|409941407|gb|EKN87036.1| AMP-binding enzyme [Leptospira interrogans str. 2002000624]
gi|409945580|gb|EKN95595.1| AMP-binding enzyme [Leptospira interrogans serovar Pomona str.
Pomona]
gi|410346208|gb|EKO97218.1| AMP-binding enzyme [Leptospira interrogans str. Brem 329]
gi|410572568|gb|EKQ35633.1| AMP-binding enzyme [Leptospira interrogans str. 2002000621]
gi|410581404|gb|EKQ49216.1| AMP-binding enzyme [Leptospira interrogans str. 2002000623]
gi|410766144|gb|EKR36832.1| AMP-binding enzyme [Leptospira interrogans serovar Hebdomadis str.
R499]
gi|410774842|gb|EKR54846.1| AMP-binding enzyme [Leptospira interrogans str. UI 12758]
gi|455667422|gb|EMF32743.1| AMP-binding enzyme [Leptospira interrogans serovar Pomona str. Fox
32256]
Length = 681
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 181/522 (34%), Positives = 270/522 (51%), Gaps = 74/522 (14%)
Query: 24 VFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKN 83
V E+I+ G+ R S + R I +D+ T +YTSGTTG PKGVML H N
Sbjct: 145 VLKMQELIEKGKALRAGGSKKAEER----IAAIDPEDLFTLIYTSGTTGLPKGVMLKHSN 200
Query: 84 LLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRY 143
++HQ+ + ++ + G + LS+LP WHV+ER Y G YT VR+L+ DL
Sbjct: 201 MMHQVNYVSPMLDIKAGARLLSILPIWHVFERVVEYVCIGLGAATYYTNVRDLRQDLATV 260
Query: 144 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFK----RIYEGFCL 199
+P +M S P ++E +Y+GI +I A + R L ++++ ++ K R +G +
Sbjct: 261 KPTFMGSAPRLWENIYNGIYTRI-NDPAQTPALRRGLFKLAYFFSRKKNQALRFLKGIEV 319
Query: 200 TRNQKQP--SY-----------------LVALIDWLWARIICAILW----PLHLLA---- 232
+ P S+ L L L A L+ P + +A
Sbjct: 320 DYTGRNPIVSFFYGILMFFQFLLTGPFTLTVLAGALGAYFAGTELYFLTSPFYTVAGLAL 379
Query: 233 -------EKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPV 284
+K+V KI++A G +A +SGGG+LP H+D F+ IG+ V GYG+TE+SPV
Sbjct: 380 VLNSFTLDKVVLAKIRAATGGQLEASISGGGALPRHVDEFFGNIGINVLEGYGMTETSPV 439
Query: 285 IAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLP------------AGSKGIVKVRGSQ 332
I+ R ++GSVG + T ++I + + N VL G KG+V ++G Q
Sbjct: 440 ISVRTFEKLIIGSVGVIVPKTRLQIRN-DNNAVLTEIDESGNITQGKMGLKGVVFIKGPQ 498
Query: 333 VMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLST 392
VM+GYFKN AT +A+ DGW+NTGD+G I + L L GRAKDT+VL
Sbjct: 499 VMKGYFKNEEATSKAIS-DGWMNTGDMGMINFKKT----------LTLTGRAKDTVVLLG 547
Query: 393 GENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASEL 452
GENVEP+ +E S+ I Q +VIGQDQ+ GAI+VPD E++ AK I ++ +L
Sbjct: 548 GENVEPVPIENKLQESAYISQCMVIGQDQKNLGAIVVPDFEKLQEWAKENGINESNNEKL 607
Query: 453 SKEKTISLLY-GELRKW-TSKCSF----QIGPIHVVDEPFTV 488
+ I LY E++ +K F Q+ P ++ +PF V
Sbjct: 608 IENPKIYDLYRKEIKALNNTKNGFKSFEQVTPFILISKPFEV 649
>gi|45657502|ref|YP_001588.1| long-chain-fatty-acid CoA ligase [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|417765801|ref|ZP_12413757.1| AMP-binding enzyme [Leptospira interrogans serovar Bulgarica str.
Mallika]
gi|417782883|ref|ZP_12430606.1| AMP-binding enzyme [Leptospira interrogans str. C10069]
gi|421086152|ref|ZP_15547003.1| AMP-binding enzyme [Leptospira santarosai str. HAI1594]
gi|421102594|ref|ZP_15563198.1| AMP-binding enzyme [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|45600741|gb|AAS70225.1| long-chain-fatty-acid CoA ligase [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|400351740|gb|EJP03953.1| AMP-binding enzyme [Leptospira interrogans serovar Bulgarica str.
Mallika]
gi|409953584|gb|EKO08080.1| AMP-binding enzyme [Leptospira interrogans str. C10069]
gi|410367708|gb|EKP23092.1| AMP-binding enzyme [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|410431717|gb|EKP76077.1| AMP-binding enzyme [Leptospira santarosai str. HAI1594]
Length = 681
Score = 262 bits (669), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 181/522 (34%), Positives = 270/522 (51%), Gaps = 74/522 (14%)
Query: 24 VFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKN 83
V E+I+ G+ R S + R I +D+ T +YTSGTTG PKGVML H N
Sbjct: 145 VLKMQELIEKGKALRAGGSKKAEER----ITAIDPEDLFTLIYTSGTTGLPKGVMLKHSN 200
Query: 84 LLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRY 143
++HQ+ + ++ + G + LS+LP WHV+ER Y G YT VR+L+ DL
Sbjct: 201 MMHQVNYVSPMLDIKAGARLLSILPIWHVFERVVEYVCIGLGAATYYTNVRDLRQDLATV 260
Query: 144 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFK----RIYEGFCL 199
+P +M S P ++E +Y+GI +I A + R L ++++ ++ K R +G +
Sbjct: 261 KPTFMGSAPRLWENIYNGIYTRI-NDPAQTPALRRGLFKLAYFFSRKKNQALRFLKGIEV 319
Query: 200 TRNQKQP--SY-----------------LVALIDWLWARIICAILW----PLHLLA---- 232
+ P S+ L L L A L+ P + +A
Sbjct: 320 DYTGRNPIVSFFYGILMFFQFLLTGPFTLTVLAGALGAYFAGTELYFLTSPFYTVAGLAL 379
Query: 233 -------EKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPV 284
+K+V KI++A G +A +SGGG+LP H+D F+ IG+ V GYG+TE+SPV
Sbjct: 380 VLNSFTLDKVVLAKIRAATGGQLEASISGGGALPRHVDEFFGNIGINVLEGYGMTETSPV 439
Query: 285 IAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA------------GSKGIVKVRGSQ 332
I+ R ++GSVG + T ++I + + N VL G KG+V ++G Q
Sbjct: 440 ISVRTFEKLIIGSVGVIVPKTRLQIRN-DNNAVLTEIDESGNITQGKMGLKGVVFIKGPQ 498
Query: 333 VMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLST 392
VM+GYFKN AT +A+ DGW+NTGD+G I + L L GRAKDT+VL
Sbjct: 499 VMKGYFKNEEATSKAIS-DGWMNTGDMGMINFKKT----------LTLTGRAKDTVVLLG 547
Query: 393 GENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASEL 452
GENVEP+ +E S+ I Q +VIGQDQ+ GAI+VPD E++ AK I ++ +L
Sbjct: 548 GENVEPVPIENKLQESAYISQCMVIGQDQKNLGAIVVPDFEKLQEWAKENGINESNNEKL 607
Query: 453 SKEKTISLLY-GELRKW-TSKCSF----QIGPIHVVDEPFTV 488
+ I LY E++ +K F Q+ P ++ +PF V
Sbjct: 608 IENPKIYDLYRKEIKALNNTKNGFKSFEQVTPFILISKPFEV 649
>gi|418676760|ref|ZP_13238038.1| AMP-binding enzyme [Leptospira kirschneri serovar Grippotyphosa
str. RM52]
gi|400322660|gb|EJO70516.1| AMP-binding enzyme [Leptospira kirschneri serovar Grippotyphosa
str. RM52]
Length = 682
Score = 262 bits (669), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 180/522 (34%), Positives = 271/522 (51%), Gaps = 74/522 (14%)
Query: 24 VFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKN 83
V E+++ G+ R S + R I +D+ T +YTSGTTG PKGVML H N
Sbjct: 146 VLKMQELLEKGKSLRAGGSKKAEER----IAAIHPEDLFTLIYTSGTTGLPKGVMLKHSN 201
Query: 84 LLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRY 143
++HQ+ + ++ + G + LS+LP WHV+ER Y G YT VR+L+ DL
Sbjct: 202 MMHQVNYVSPMLNIKAGARLLSILPIWHVFERVVEYVCIGLGAATYYTNVRDLRQDLATV 261
Query: 144 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFK----RIYEGFCL 199
+P +M S P ++E +Y+GI +I A + R L ++++ ++ K R +G +
Sbjct: 262 KPTFMGSAPRLWENIYNGIYTRI-NDPAQTPALRRGLFKLAYFFSRKKNQALRFLKGIEV 320
Query: 200 TRNQKQP--SY-----------------LVALIDWLWARIICAILW----PLHLLA---- 232
+ P S+ L L L A L+ PL+ ++
Sbjct: 321 DYTGRNPIVSFFYGILMFFQFLLTGPFTLTVLAGALGAYFAGTELYFLTSPLYSVSGLAF 380
Query: 233 -------EKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPV 284
+K+V KI++A G KA +SGGG+LP H+D F+ IG+ V GYG+TE+SPV
Sbjct: 381 VLNSFTLDKIVLAKIRAATGGQLKASISGGGALPRHVDEFFGNIGINVLEGYGMTETSPV 440
Query: 285 IAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLP------------AGSKGIVKVRGSQ 332
I+ R ++GSVG + T ++I + + N VL G KG+V ++G Q
Sbjct: 441 ISVRTFEKLIIGSVGVIVPKTRLQIRN-DNNAVLTEVDESGNITQGKMGLKGVVFIKGPQ 499
Query: 333 VMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLST 392
VM+GYFKN AT +A+ DGW+NTGD+G I + L L GRAKDT+VL
Sbjct: 500 VMKGYFKNEEATSKAIS-DGWMNTGDMGMINFKKT----------LTLTGRAKDTVVLLG 548
Query: 393 GENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASEL 452
GENVEP+ +E S+ I Q +VIGQDQ+ GAI+VPD E++ AK I ++ +L
Sbjct: 549 GENVEPVPIENKLQESAYISQCMVIGQDQKNLGAIVVPDFEKLQEWAKENGINESNNEKL 608
Query: 453 SKEKTISLLY-GELRKW-TSKCSF----QIGPIHVVDEPFTV 488
+ + LY E++ +K F Q+ P ++ +PF V
Sbjct: 609 IENSKVYDLYRKEIKALNNTKNGFKSFEQVTPFILISKPFEV 650
>gi|398335133|ref|ZP_10519838.1| long-chain-fatty-acid CoA ligase [Leptospira kmetyi serovar
Malaysia str. Bejo-Iso9]
Length = 683
Score = 262 bits (669), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 185/513 (36%), Positives = 259/513 (50%), Gaps = 74/513 (14%)
Query: 36 ESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI-----RS 90
E KA + + E I +D+ T +YTSGTTG PKGVML H N++HQ+
Sbjct: 155 EEGKALRAKGGKKAEKRIEDIKPEDLFTLIYTSGTTGMPKGVMLMHSNMIHQMIHVVPML 214
Query: 91 LYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMIS 150
L DI P D LS+LP WH++ER Y S GI+ YT V +LK+DL + +P +M S
Sbjct: 215 LTDIKPT---DSMLSILPIWHIFERVNEYGAISSGIQTYYTKVSDLKNDLAKAKPSFMAS 271
Query: 151 VPLVYETLYSGIQKQIF---TSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQ-- 205
P V+E++Y+GI ++ + RR + + S Y A +R G + +
Sbjct: 272 APRVWESVYTGIYNKVNDPKQTPPLRRGLFKLAYFFSKHYNASRRFLNGLEVDYENRNIL 331
Query: 206 -------PSYLVALIDWLWARIICAILWPLHLLA-------------------------E 233
S +V L+ + AIL L L A +
Sbjct: 332 KSLAIGTKSLIVLLLTGPFTVSAMAILAYLALPAYGVHLPNALFFTIAGLGLIFNAKTLD 391
Query: 234 KLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTC 292
+V KI++A G K +SGGG+L H+D F+ IG+ V GYG+TE+SPVI+ R
Sbjct: 392 AIVLSKIRAATGGRLKGSMSGGGALQSHVDNFFNDIGMLVLEGYGMTETSPVISVRPFVK 451
Query: 293 NVLGSVGHPINHTEIKIVD---------AETNEVLPA--GSKGIVKVRGSQVMQGYFKNP 341
++GSVG + +E+ I D + EVL G KG+V V+G QVM+GY+KNP
Sbjct: 452 PIIGSVGFLVPKSELMIKDDNGHVLTHINDKYEVLAGKLGQKGVVFVKGPQVMKGYYKNP 511
Query: 342 SATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLEL 401
TK+ + DGW+NTGDIG+I L L GRAKDT+VL GENVEP+ +
Sbjct: 512 EVTKKTI-VDGWMNTGDIGFI----------NFKKTLTLTGRAKDTVVLLGGENVEPVPI 560
Query: 402 EEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE-KTISL 460
E S I+Q +VIGQDQ+ GAIIVPD +++ K I + EL K K I
Sbjct: 561 ENKMDESPYIKQSMVIGQDQKVLGAIIVPDVDQLAAWCKENGIDPSKVEELIKNPKVIDF 620
Query: 461 LYGELRKWTS-KCSF----QIGPIHVVDEPFTV 488
E+R + S K F Q+ + + +PF V
Sbjct: 621 YKKEVRSYNSTKTGFKSFEQVQHVILTKKPFEV 653
>gi|421117548|ref|ZP_15577908.1| AMP-binding enzyme [Leptospira interrogans serovar Canicola str.
Fiocruz LV133]
gi|410010882|gb|EKO69013.1| AMP-binding enzyme [Leptospira interrogans serovar Canicola str.
Fiocruz LV133]
Length = 681
Score = 261 bits (668), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 183/526 (34%), Positives = 269/526 (51%), Gaps = 82/526 (15%)
Query: 24 VFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKN 83
V E+I+ G+ R S + R I +D+ T +YTSGTTG PKGVML H N
Sbjct: 145 VLKMQELIEKGKALRAGGSKKAEER----IAAIDPEDLFTLIYTSGTTGLPKGVMLKHSN 200
Query: 84 LLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRY 143
++HQ+ + ++ + G + LS+LP WHV+ER Y G YT VR+L+ DL
Sbjct: 201 MMHQVNYVSPMLDIKAGARLLSILPIWHVFERVVEYVCIGLGAATYYTNVRDLRQDLATV 260
Query: 144 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFK----RIYEG--- 196
+P +M S P ++E +Y+GI +I A + R L ++++ ++ K R +G
Sbjct: 261 KPTFMGSAPRLWENIYNGIYTRI-NDPAQTPALRRGLFKLAYFFSRKKNQALRFLKGIEV 319
Query: 197 --------------------FCLTRNQKQPSYLVALIDWLWARIICAILW----PLHLLA 232
F LT P L L L A L+ P + +A
Sbjct: 320 DYAGRNPIVSFFYGILMFFQFLLT----GPFTLTVLAGALGAYFAGTELYFLTSPFYTVA 375
Query: 233 -----------EKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTE 280
+K+V KI++A G +A +SGGG+LP H+D F+ IG+ V GYG+TE
Sbjct: 376 GLALVLNSFTLDKVVLAKIRAATGGQLEASISGGGALPRHVDEFFGNIGINVLEGYGMTE 435
Query: 281 SSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVL------------PAGSKGIVKV 328
+SPVI+ R ++GSVG + T ++I + + N VL G KG+V +
Sbjct: 436 TSPVISVRTFEKLIIGSVGVIVPKTRLQIRN-DNNAVLTEIDESGNITQGKMGLKGVVFI 494
Query: 329 RGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTI 388
+G QVM+GYFKN AT +A+ DGW+NTGD+G I + L L GRAKDT+
Sbjct: 495 KGPQVMKGYFKNEEATSKAIS-DGWMNTGDMGMINFKKT----------LTLTGRAKDTV 543
Query: 389 VLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHAD 448
VL GENVEP+ +E S+ I Q +VIGQDQ+ GAI+VPD E++ AK I ++
Sbjct: 544 VLLGGENVEPVPIENKLQESAYISQCMVIGQDQKNLGAIVVPDFEKLQEWAKENGINESN 603
Query: 449 ASELSKEKTISLLY-GELRKW-TSKCSF----QIGPIHVVDEPFTV 488
+L + I LY E++ +K F Q+ P ++ +PF V
Sbjct: 604 NEKLIENPKIYDLYRKEIKALNNTKNGFKSFEQVTPFILISKPFEV 649
>gi|392403501|ref|YP_006440113.1| AMP-dependent synthetase and ligase [Turneriella parva DSM 21527]
gi|390611455|gb|AFM12607.1| AMP-dependent synthetase and ligase [Turneriella parva DSM 21527]
Length = 645
Score = 261 bits (668), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 163/447 (36%), Positives = 257/447 (57%), Gaps = 35/447 (7%)
Query: 56 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYER 115
+ D++ VYTSGTTG PKGVML+H N Q+R++ +++ D L++LPPWHV+ R
Sbjct: 185 VAPSDLSCLVYTSGTTGEPKGVMLSHGNFASQMRTIPEVLKIGPTDSGLTLLPPWHVFGR 244
Query: 116 ACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 175
+ G + YT ++++ DD++ +P Y+ +VP ++E +Y+ I + A +
Sbjct: 245 ITEMMFIAIGASITYTDIKHIGDDMRSIKPTYVPAVPRIWEGIYNKIIGNV--KKAGKEP 302
Query: 176 VARALIRISFAYTAFKRIYEGFCLTRNQKQP--SYLVALIDWLWARIICAILWPL-HLLA 232
+ + Y F + LT +K P +V+ I + AI+W + L
Sbjct: 303 IFNKFKAAALKYNHFVSM-----LTGKEKLPIGRNIVSAIGARIVGLFGAIVWFIPKKLG 357
Query: 233 EKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPT 291
+ LV+KK+ +A G + KA +SGGG+LP +ID F+ AIGV++ GYGLTE+SPV++ RR
Sbjct: 358 DILVFKKVLAATGGNLKASLSGGGALPSYIDDFFRAIGVRILEGYGLTETSPVLSVRRME 417
Query: 292 CNVLGSVGHPINHTEIKIVDAETNEV--LPAGSKGIVKVRGSQVMQGYFKNPSATKQALD 349
+ G+VG I HTE K++D E +V +P G+KG + VRG QVMQGY+KNP T L
Sbjct: 418 RLIPGTVGPLIAHTEYKLIDLEGRDVTRIP-GAKGTLHVRGPQVMQGYYKNPKKTADVLT 476
Query: 350 EDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSS 409
DGW NTGD+ + +HS G + + GR+KDT+VL GENVEP +EE S
Sbjct: 477 PDGWFNTGDL--VVFNHS--------GEISIVGRSKDTLVLVGGENVEPTPIEEKMKESE 526
Query: 410 LIRQIVVI----GQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLY-GE 464
I ++++ G+DQ+ GA+IVP+ + + AK+ + V D + L K+ + +Y E
Sbjct: 527 FIDHVMLVSRAFGEDQKVLGALIVPNADNLADWAKK-NGVSGDFAALIKDPKVHAMYRHE 585
Query: 465 LRKW-TSKCSF----QIGPIHVVDEPF 486
+ K+ S+ F ++G ++ +PF
Sbjct: 586 INKYINSENGFKNFEKVGVFTLLKKPF 612
>gi|418698153|ref|ZP_13259132.1| AMP-binding enzyme [Leptospira interrogans serovar Bataviae str.
L1111]
gi|418711864|ref|ZP_13272616.1| AMP-binding enzyme [Leptospira interrogans serovar Grippotyphosa
str. UI 08368]
gi|418717129|ref|ZP_13276966.1| AMP-binding enzyme [Leptospira interrogans str. UI 08452]
gi|418726085|ref|ZP_13284696.1| AMP-binding enzyme [Leptospira interrogans str. UI 12621]
gi|421123845|ref|ZP_15584115.1| AMP-binding enzyme [Leptospira interrogans serovar Grippotyphosa
str. 2006006986]
gi|421135046|ref|ZP_15595176.1| AMP-binding enzyme [Leptospira interrogans serovar Grippotyphosa
str. Andaman]
gi|409959995|gb|EKO23749.1| AMP-binding enzyme [Leptospira interrogans str. UI 12621]
gi|410020929|gb|EKO87724.1| AMP-binding enzyme [Leptospira interrogans serovar Grippotyphosa
str. Andaman]
gi|410438332|gb|EKP87418.1| AMP-binding enzyme [Leptospira interrogans serovar Grippotyphosa
str. 2006006986]
gi|410762857|gb|EKR29016.1| AMP-binding enzyme [Leptospira interrogans serovar Bataviae str.
L1111]
gi|410767830|gb|EKR43091.1| AMP-binding enzyme [Leptospira interrogans serovar Grippotyphosa
str. UI 08368]
gi|410787196|gb|EKR80930.1| AMP-binding enzyme [Leptospira interrogans str. UI 08452]
gi|456969848|gb|EMG10764.1| AMP-binding enzyme [Leptospira interrogans serovar Grippotyphosa
str. LT2186]
Length = 681
Score = 261 bits (667), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 181/522 (34%), Positives = 270/522 (51%), Gaps = 74/522 (14%)
Query: 24 VFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKN 83
V E+I+ G+ R S + R I +D+ T +YTSGTTG PKGVML H N
Sbjct: 145 VLKMQELIEKGKALRAGGSKKAEER----IAAIHPEDLFTLIYTSGTTGLPKGVMLKHSN 200
Query: 84 LLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRY 143
++HQ+ + ++ + G + LS+LP WHV+ER Y G YT VR+L+ DL
Sbjct: 201 MMHQVNYVSPMLDIKAGARLLSILPIWHVFERVVEYVCIGLGAATYYTNVRDLRQDLATV 260
Query: 144 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFK----RIYEGFCL 199
+P +M S P ++E +Y+GI +I A + R L ++++ ++ K R +G +
Sbjct: 261 KPTFMGSAPRLWENIYNGIYTRI-NDPAQTPALRRGLFKLAYFFSRKKNQALRFLKGIEV 319
Query: 200 TRNQKQP--SY-----------------LVALIDWLWARIICAILW----PLHLLA---- 232
+ P S+ L L L A L+ P + +A
Sbjct: 320 DYTGRNPIVSFFYGILMFFQFLLTGPFTLTVLAGALGAYFAGTELYFLTSPFYTVAGLAL 379
Query: 233 -------EKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPV 284
+K+V KI++A G +A +SGGG+LP H+D F+ IG+ V GYG+TE+SPV
Sbjct: 380 VLNSFTLDKVVLAKIRAATGGQLEASISGGGALPRHVDEFFGNIGINVLEGYGMTETSPV 439
Query: 285 IAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLP------------AGSKGIVKVRGSQ 332
I+ R ++GSVG + T ++I + + N VL G KG+V ++G Q
Sbjct: 440 ISVRTFEKLIIGSVGVIVPKTRLQIRN-DNNAVLTEIDESGNITQGKMGLKGVVFIKGPQ 498
Query: 333 VMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLST 392
VM+GYFKN AT +A+ DGW+NTGD+G I + L L GRAKDT+VL
Sbjct: 499 VMKGYFKNEEATSKAIS-DGWMNTGDMGMINFKKT----------LTLTGRAKDTVVLLG 547
Query: 393 GENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASEL 452
GENVEP+ +E S+ I Q +VIGQDQ+ GAI+VPD E++ AK I ++ +L
Sbjct: 548 GENVEPVPIENKLQESAYISQCMVIGQDQKNLGAIVVPDFEKLQEWAKENGINESNNEKL 607
Query: 453 SKEKTISLLY-GELRKW-TSKCSF----QIGPIHVVDEPFTV 488
+ I LY E++ +K F Q+ P ++ +PF V
Sbjct: 608 IENPKIYDLYRKEIKALNNTKNGFKSFEQVTPFILISKPFEV 649
>gi|455792690|gb|EMF44430.1| AMP-binding enzyme [Leptospira interrogans serovar Lora str. TE
1992]
Length = 681
Score = 261 bits (666), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 180/522 (34%), Positives = 270/522 (51%), Gaps = 74/522 (14%)
Query: 24 VFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKN 83
V E+I+ G+ R S + R I +D+ T +YTSGTTG PKGVML H N
Sbjct: 145 VLKMQELIEKGKALRAGGSKKAEER----IAAIHPEDLFTLIYTSGTTGLPKGVMLKHSN 200
Query: 84 LLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRY 143
++HQ+ + ++ + G + LS+LP WHV+ER Y G YT VR+L+ DL
Sbjct: 201 MMHQVNYVSPMLDIKAGARLLSILPIWHVFERVVEYVCIGLGAATYYTNVRDLRQDLATV 260
Query: 144 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFK----RIYEGFCL 199
+P +M S P ++E +Y+GI +I A + R L ++++ ++ K R +G +
Sbjct: 261 KPTFMGSAPRLWENIYNGIYTRI-NDPAQTPALRRGLFKLAYFFSRKKNQALRFLKGIEV 319
Query: 200 TRNQKQP--SY-----------------LVALIDWLWARIICAILW----PLHLLA---- 232
+ P S+ L L L A L+ P + +A
Sbjct: 320 DYTGRNPIVSFFYGILMFFQFLLTGPFTLTVLAGALGAYFAGTELYFLTSPFYTVAGLAL 379
Query: 233 -------EKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPV 284
+K+V KI++A G +A +SGGG+LP H+D F+ IG+ V GYG+TE+SPV
Sbjct: 380 VLNSFTLDKVVLAKIRAATGGQLEASISGGGALPRHVDEFFGNIGINVLEGYGMTETSPV 439
Query: 285 IAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLP------------AGSKGIVKVRGSQ 332
I+ R ++GSVG + T ++I + + N VL G KG+V ++G Q
Sbjct: 440 ISVRTFEKLIIGSVGVIVPKTRLQIRN-DNNAVLTEIDESGNITQGKMGLKGVVFIKGPQ 498
Query: 333 VMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLST 392
VM+GYFKN AT +A+ DGW+NTGD+G I + L L GRAKDT+VL
Sbjct: 499 VMKGYFKNEEATSKAIS-DGWMNTGDMGMINFKKT----------LTLTGRAKDTVVLLG 547
Query: 393 GENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASEL 452
GENVEP+ +E S+ I Q ++IGQDQ+ GAI+VPD E++ AK I ++ +L
Sbjct: 548 GENVEPVPIENKLQESAYISQCMIIGQDQKNLGAIVVPDFEKLQEWAKENGINESNNEKL 607
Query: 453 SKEKTISLLY-GELRKW-TSKCSF----QIGPIHVVDEPFTV 488
+ I LY E++ +K F Q+ P ++ +PF V
Sbjct: 608 IENPKIYDLYRKEIKALNNTKNGFKSFEQVTPFILISKPFEV 649
>gi|325971583|ref|YP_004247774.1| long-chain-fatty-acid--CoA ligase [Sphaerochaeta globus str. Buddy]
gi|324026821|gb|ADY13580.1| Long-chain-fatty-acid--CoA ligase [Sphaerochaeta globus str. Buddy]
Length = 639
Score = 261 bits (666), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 165/429 (38%), Positives = 247/429 (57%), Gaps = 41/429 (9%)
Query: 20 EEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGS-DDIATYVYTSGTTGNPKGVM 78
E++ + Y DL +E R D N AR G+ D++AT ++TSGTTG+PKGVM
Sbjct: 152 EDVQILFYR---DLVKEGRTLLDDRNVARYIENERKKGTIDEVATIIFTSGTTGDPKGVM 208
Query: 79 LTHKNLLHQIRSLYDIV----PAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVR 134
LTHKN +Q+ ++ ++ PA+ ++LS+LP WH +ER Y I S + Y+
Sbjct: 209 LTHKNFAYQLEAVPKLIQKFAPAQ---RWLSVLPVWHSFERILQYVIISNASTIAYSKPL 265
Query: 135 N--LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARAL----IRISFAYT 188
L DL PH+M SVP ++E + +G+ F S + +A+ L ++I+ Y+
Sbjct: 266 GSILLADLAVVNPHWMGSVPRIWEAVKAGV----FASMKNKSPIAKGLFAFFVQIARLYS 321
Query: 189 AFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS- 247
K + G T ++ ++D L + + +L+PL+ L KLV+ K++ +G +
Sbjct: 322 HNKDLLLGEVATFQKRN-----RVLDVLVSFLPTVLLYPLYKLGNKLVFSKVKHKLGKNF 376
Query: 248 KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEI 307
AGVSGGGSL +DLF+ +IG+K+ GYGLTES+PV+A R P + + + TE+
Sbjct: 377 IAGVSGGGSLSEGVDLFFASIGIKLLDGYGLTESAPVVAVR-PLSHGVKRTITALEGTEV 435
Query: 308 KIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIG-WIAPHH 366
+IVD EV P G KG+++VRG QVM+GY+K T + L +DGWL+TGD+G W H
Sbjct: 436 RIVDETGIEVKP-GQKGVIQVRGPQVMKGYYKRQDLTDRVLSKDGWLDTGDLGMWT---H 491
Query: 367 SRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGA 426
G + GRAKDTIVLS GEN+EP+ +E S I VV+GQDQ+ GA
Sbjct: 492 K--------GEFAIRGRAKDTIVLSGGENLEPVPIEAKLCESEFIESAVVLGQDQKYLGA 543
Query: 427 IIVPDKEEV 435
+IV +K+ +
Sbjct: 544 LIVLNKKRI 552
>gi|418720213|ref|ZP_13279411.1| AMP-binding enzyme [Leptospira borgpetersenii str. UI 09149]
gi|418735548|ref|ZP_13291958.1| AMP-binding enzyme [Leptospira borgpetersenii serovar Castellonis
str. 200801910]
gi|421095199|ref|ZP_15555912.1| AMP-binding enzyme [Leptospira borgpetersenii str. 200801926]
gi|410361909|gb|EKP12949.1| AMP-binding enzyme [Leptospira borgpetersenii str. 200801926]
gi|410743191|gb|EKQ91934.1| AMP-binding enzyme [Leptospira borgpetersenii str. UI 09149]
gi|410748682|gb|EKR01576.1| AMP-binding enzyme [Leptospira borgpetersenii serovar Castellonis
str. 200801910]
gi|456886947|gb|EMF98051.1| AMP-binding enzyme [Leptospira borgpetersenii str. 200701203]
Length = 683
Score = 261 bits (666), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 184/520 (35%), Positives = 257/520 (49%), Gaps = 75/520 (14%)
Query: 29 EIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI 88
+I DL E KA + + E I +D+ T +YTSGTTG PKGVML H N++HQ+
Sbjct: 149 KIYDLVEEG-KALRAKGSRKAEKRIEDIKPEDLFTLIYTSGTTGMPKGVMLMHSNMVHQM 207
Query: 89 -----RSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRY 143
L D P + LS+LP WH++ER Y SRGI+ YT V +LK+DL +
Sbjct: 208 IHVVPMLLTDTKPT---NSMLSILPIWHIFERVNEYGAISRGIQTYYTKVSDLKNDLTKA 264
Query: 144 QPHYMISVPLVYETLYSGIQKQIF---TSSAARRVVARALIRISFAYTAFKRIYEGFCLT 200
+P +M S P V+E +Y+ I ++ + R+ + + S Y A +R G +
Sbjct: 265 KPSFMGSAPRVWENVYTNIYNKVNDPKQTPPLRKFLFKLAYFFSKHYNASRRFLNGLEVD 324
Query: 201 RNQKQ----------------------------------PSYLVALIDWLWARIICAILW 226
+ P+Y V L W + I L
Sbjct: 325 YENRSILKSIAIGTKSLIVLLLTGPFTLSAIAILAYLALPTYGVRLPGWFFFTIAGLGLI 384
Query: 227 PLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVI 285
+ +V KI++A G K +SGGG+L H+D F+ IG+ V GYG+TE+SPVI
Sbjct: 385 FNAKTLDAIVLSKIRAATGGRLKGSLSGGGALQSHVDNFFNDIGMLVLEGYGMTETSPVI 444
Query: 286 AARRPTCNVLGSVGHPINHTEIKIVDAETN---------EVLPA--GSKGIVKVRGSQVM 334
+ R ++GSVG + +E+ I D N EVL G KGIV V+G QVM
Sbjct: 445 SVRPFAKPIIGSVGFLVPKSELMIKDENGNILTHINDKFEVLAGKLGQKGIVFVKGPQVM 504
Query: 335 QGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGE 394
+GY+K+P TK+ + DGW+NTGDIG+I L L GRAKDT+VL GE
Sbjct: 505 KGYYKDPEVTKKTI-VDGWMNTGDIGFI----------NFKKTLTLTGRAKDTVVLLGGE 553
Query: 395 NVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK 454
NVEP+ +E S I+Q +VIGQD++ GAIIVPD E + K I + EL K
Sbjct: 554 NVEPVPIENKMDESPFIKQSMVIGQDKKVLGAIIVPDMEHLTFWCKENGIDSSKIDELIK 613
Query: 455 E-KTISLLYGELRKWTS-KCSF----QIGPIHVVDEPFTV 488
K I E+R + S K F Q+ + + +PF V
Sbjct: 614 NPKVIEFYKKEVRNYNSTKTGFKSFEQVQHVILAKKPFEV 653
>gi|449123801|ref|ZP_21760123.1| hypothetical protein HMPREF9723_00167 [Treponema denticola OTK]
gi|448944054|gb|EMB24936.1| hypothetical protein HMPREF9723_00167 [Treponema denticola OTK]
Length = 641
Score = 260 bits (665), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 156/445 (35%), Positives = 244/445 (54%), Gaps = 23/445 (5%)
Query: 21 EIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLT 80
+I +Y +IIDLG+ +R + E + +DD+A+ ++TSGTTGNPKGV ++
Sbjct: 157 KIEFHTYADIIDLGKSARI----EGKFKPEEYAENVDTDDLASIIFTSGTTGNPKGVTMS 212
Query: 81 HKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN--LKD 138
H+N + Q+ L D + + G K +S+LP WH +ERAC Y I G + Y+ L
Sbjct: 213 HRNFMTQLLELPDRIILKPGQKAISVLPVWHSFERACEYVIIISGGTIAYSKPIGSILLA 272
Query: 139 DLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFC 198
D+ + P SVP ++E +Y GI K + + + + KR G C
Sbjct: 273 DMLKINPTLFPSVPRIWEAVYDGIFKVMKKRGRPLYYLFLFFVDVGIKTMRLKRRVTGQC 332
Query: 199 LTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIG-ISKAGVSGGGSL 257
QK+ ++ ++ L ++C + P++ + + L+Y+ I+ G KAGVSGGG+L
Sbjct: 333 -PHFQKRSKFIYPILAIL--PLLC--IAPMYYIGDLLIYRTIRKKFGKCFKAGVSGGGAL 387
Query: 258 PMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEV 317
P ++D F+ A+ + V GYG+TE++PVI+ R V G++G P+ E KI+D NE
Sbjct: 388 PPNVDEFFWAVRINVMEGYGITETAPVISVRPMPRPVFGTLGKPLACFESKIIDKNGNE- 446
Query: 318 LPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGV 377
LP KG++ V+G V +GY+K+P T + +D+DGW +TGD+ + G
Sbjct: 447 LPHNRKGLLLVKGDAVTKGYYKDPERTAEVIDKDGWFDTGDLAI----------KTIDGE 496
Query: 378 LVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLM 437
L+L+GR K+TIVL GEN+EP+ +E S LI VV+GQDQR GA+IV KE +
Sbjct: 497 LILKGRRKNTIVLRGGENIEPVPIEVKLQESPLISIAVVLGQDQRSLGALIVVHKENLQA 556
Query: 438 AAKRLSIVHADASELSKEKTISLLY 462
A + + SEL + + +Y
Sbjct: 557 WAANNGLRNVPVSELVHDSNVQKMY 581
>gi|254443628|ref|ZP_05057104.1| AMP-binding enzyme, putative [Verrucomicrobiae bacterium DG1235]
gi|198257936|gb|EDY82244.1| AMP-binding enzyme, putative [Verrucomicrobiae bacterium DG1235]
Length = 638
Score = 260 bits (665), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 173/481 (35%), Positives = 255/481 (53%), Gaps = 49/481 (10%)
Query: 29 EIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI 88
E++D G+E R + D R + I DD+ T +YTSGTTG PKGV LTH N+ Q+
Sbjct: 157 ELVDWGKELR----EQGDRRVEERMAQIRPDDLFTLIYTSGTTGTPKGVQLTHSNMASQV 212
Query: 89 RSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYM 148
R+L + E D+ LS+LP WH YER S G +T++R + DDL+ +P M
Sbjct: 213 RNLPFCL--EQDDRMLSILPVWHSYERVFHMIAVSNGCCTYFTSLRTIADDLKTVKPTIM 270
Query: 149 ISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSY 208
S P ++E LY I K + S RR + RA AY + R+ +G +K+
Sbjct: 271 ASAPRLWENLYLRIMKNVKESHWIRRGLFRA------AYFS-SRMVKGSTFFFQRKEMDL 323
Query: 209 LVALIDWLWARIICAIL-----WPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHID 262
I +++ + PL++ +V +K++ +G S K VSGGG+L H+D
Sbjct: 324 TGRSIGETLGKVLSGVFKIMLFLPLYVALNAVVLEKLRQIVGGSFKGTVSGGGALQPHVD 383
Query: 263 LFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVL---- 318
F+ IGV V+ GYGLTE+SPV A R V+G+VG TE++I+D T E+L
Sbjct: 384 EFFNYIGVPVKEGYGLTETSPVAAVRTVPKLVIGTVGPLYPETELRILDLNTGEILYPNT 443
Query: 319 -----PAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRR 373
G KG + ++G QVM+GY+KNP AT + L E GW NTGDIG
Sbjct: 444 KYRANGRGQKGEIHLKGPQVMKGYYKNPEATDRVLKE-GWFNTGDIGMYT---------- 492
Query: 374 CGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 433
L + GR+KDTIVL GEN+EP+ +E S LI Q +V+GQD++ GA++VP E
Sbjct: 493 FNDCLKIMGRSKDTIVLLNGENLEPIPIEAKLCESPLIDQCMVVGQDKKHLGALVVPSLE 552
Query: 434 EVLMAAKRLSIVHADASELSKEK-TISLLYGELRKWTS-----KCSFQIGPIHVVDEPFT 487
A + + +EL+ K + L++ E +++ S K + + ++D+PF
Sbjct: 553 GFAAAGIKAETL----TELAGSKEAVRLIHEEAKRFISFDNGFKKYEHVHSLKLLDKPFE 608
Query: 488 V 488
V
Sbjct: 609 V 609
>gi|116326895|ref|YP_796615.1| long-chain-fatty-acid--CoA ligase [Leptospira borgpetersenii
serovar Hardjo-bovis str. L550]
gi|116329874|ref|YP_799592.1| long-chain-fatty-acid--CoA ligase [Leptospira borgpetersenii
serovar Hardjo-bovis str. JB197]
gi|116119639|gb|ABJ77682.1| Long-chain-fatty-acid--CoA ligase [Leptospira borgpetersenii
serovar Hardjo-bovis str. L550]
gi|116123563|gb|ABJ74834.1| Long-chain-fatty-acid--CoA ligase [Leptospira borgpetersenii
serovar Hardjo-bovis str. JB197]
Length = 683
Score = 260 bits (665), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 184/520 (35%), Positives = 257/520 (49%), Gaps = 75/520 (14%)
Query: 29 EIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI 88
+I DL E KA + + E I +D+ T +YTSGTTG PKGVML H N++HQ+
Sbjct: 149 KIYDLVEEG-KALRAKGSRKAEKRIEDIKPEDLFTLIYTSGTTGMPKGVMLMHSNMVHQM 207
Query: 89 -----RSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRY 143
L D P + LS+LP WH++ER Y SRGI+ YT V +LK+DL +
Sbjct: 208 IHVVPMLLTDTKPT---NSMLSILPIWHIFERVNEYGAISRGIQTYYTKVSDLKNDLTKA 264
Query: 144 QPHYMISVPLVYETLYSGIQKQIF---TSSAARRVVARALIRISFAYTAFKRIYEGFCLT 200
+P +M S P V+E +Y+ I ++ + R+ + + S Y A +R G +
Sbjct: 265 KPSFMGSAPRVWENVYTNIYNKVNDPKQTPPLRKFLFKLAYFFSKHYNASRRFLNGLEVD 324
Query: 201 RNQKQ----------------------------------PSYLVALIDWLWARIICAILW 226
+ P+Y V L W + I L
Sbjct: 325 YENRSILKSIAIGTKSLIVLLLTGPFTLSAIAILAYLALPTYGVRLPGWFFFTIAGLGLI 384
Query: 227 PLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVI 285
+ +V KI++A G K +SGGG+L H+D F+ IG+ V GYG+TE+SPVI
Sbjct: 385 FNAKTLDAIVLSKIRAATGGRLKGSLSGGGALQSHVDNFFNDIGMLVLEGYGMTETSPVI 444
Query: 286 AARRPTCNVLGSVGHPINHTEIKIVDAETN---------EVLPA--GSKGIVKVRGSQVM 334
+ R ++GSVG + +E+ I D N EVL G KGIV V+G QVM
Sbjct: 445 SVRPFAKPIIGSVGFLVPKSELMIKDENGNILTHINDKFEVLAGKLGQKGIVFVKGPQVM 504
Query: 335 QGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGE 394
+GY+K+P TK+ + DGW+NTGDIG+I L L GRAKDT+VL GE
Sbjct: 505 KGYYKDPEVTKKTI-VDGWMNTGDIGFI----------NFKKTLTLTGRAKDTVVLLGGE 553
Query: 395 NVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK 454
NVEP+ +E S I+Q +VIGQD++ GAIIVPD E + K I + EL K
Sbjct: 554 NVEPVPIENKMDESPFIKQSMVIGQDKKVLGAIIVPDMEHLTFWCKENGIDSSKIDELIK 613
Query: 455 E-KTISLLYGELRKWTS-KCSF----QIGPIHVVDEPFTV 488
K I E+R + S K F Q+ + + +PF V
Sbjct: 614 NPKVIEFYKKEVRNYNSTKTGFKSFEQVQHVILAKKPFEV 653
>gi|421097955|ref|ZP_15558632.1| AMP-binding enzyme [Leptospira borgpetersenii str. 200901122]
gi|410799027|gb|EKS01110.1| AMP-binding enzyme [Leptospira borgpetersenii str. 200901122]
Length = 681
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 180/522 (34%), Positives = 272/522 (52%), Gaps = 74/522 (14%)
Query: 24 VFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKN 83
V ++I+ G++ R S + R I S+D+ T +YTSGTTG PKGVML H N
Sbjct: 145 VLKMQDLIEKGKKLRAGGSRKAEER----VSAINSEDLFTLIYTSGTTGLPKGVMLKHSN 200
Query: 84 LLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRY 143
++HQI + ++ + + LS+LP WHV+ER Y G YT VR+L+ DL
Sbjct: 201 MMHQIIYVSPMLDINSEARLLSILPIWHVFERVVEYVCIGLGAATYYTNVRDLRQDLATV 260
Query: 144 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFK----RIYEGFCL 199
+P +M S P ++E +Y+GI +I A R L R+++ ++ K R +G +
Sbjct: 261 KPTFMGSAPRLWENIYNGIYTRI-NDPAQTPAFRRGLFRLAYFFSRKKNQALRFLKGIEV 319
Query: 200 TRNQKQP--SYLVALIDWL--------------------WARI----ICAILWPLHLLA- 232
+ P S+ ++ ++ AR + + L+ + LA
Sbjct: 320 DYTGRNPIGSFFYGILMFIQFLLTGPFTLTIFAGVLGVYLARTELYYLTSFLYVIAGLAL 379
Query: 233 -------EKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPV 284
+K+V KI++A G KA +SGGG+LP H+D F+ IG+ V GYG+TE+SPV
Sbjct: 380 LLNSFTLDKIVLAKIRAATGGQLKASISGGGALPRHVDEFFGNIGINVLEGYGMTETSPV 439
Query: 285 IAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA------------GSKGIVKVRGSQ 332
I+ R ++GSVG T+++I + + N VL G KG+V V+G Q
Sbjct: 440 ISVRTFEKLIIGSVGVIAPKTKLQIRN-DNNAVLTEMDENGKITQGKLGLKGVVFVKGPQ 498
Query: 333 VMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLST 392
VM+GYFKN AT +A+ DGW+NTGD+G I + L L GRAKDT+VL
Sbjct: 499 VMKGYFKNEEATSKAI-TDGWMNTGDMGMINFKKT----------LTLTGRAKDTVVLLG 547
Query: 393 GENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASEL 452
GENVEP+ +E S+ I Q +VIGQDQ+ GAI+VPD E++ A+ I + +L
Sbjct: 548 GENVEPVPIENKLQESTYISQCMVIGQDQKNLGAIVVPDFEKLQEWAQENGINETNKDKL 607
Query: 453 SKEKTISLLY-GELRKW-TSKCSF----QIGPIHVVDEPFTV 488
+ + LY E++ +K F Q+ P ++ +PF V
Sbjct: 608 IENPKVYDLYRKEIKALNNTKNGFKSFEQVTPFILISKPFEV 649
>gi|116330937|ref|YP_800655.1| long-chain-fatty-acid--CoA ligase [Leptospira borgpetersenii
serovar Hardjo-bovis str. JB197]
gi|116124626|gb|ABJ75897.1| Long-chain-fatty-acid--CoA ligase [Leptospira borgpetersenii
serovar Hardjo-bovis str. JB197]
Length = 681
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 176/522 (33%), Positives = 271/522 (51%), Gaps = 74/522 (14%)
Query: 24 VFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKN 83
V ++I+ G++ R S + R I S+D+ T +YTSGTTG PKGVML H N
Sbjct: 145 VLKMQDLIEKGKKLRTDGSRKAEER----VSAIDSEDLFTLIYTSGTTGLPKGVMLKHSN 200
Query: 84 LLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRY 143
++HQI+ + ++ + + LS+LP WHV+ER Y G YT VR+L+ DL
Sbjct: 201 MMHQIKYVSPMLDINSEARLLSILPVWHVFERVVEYVCIGLGAATYYTNVRDLRQDLATV 260
Query: 144 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFK----RIYEGFCL 199
+P +M S P ++E +Y+GI +I A R L R+++ ++ K R +G +
Sbjct: 261 KPTFMGSAPRLWENIYNGIYTRI-NDPAQTPAFRRGLFRLAYFFSRKKNQALRFLKGIEV 319
Query: 200 TRNQKQPSY-----LVALIDWL----------------------------WARIICAILW 226
+ P + ++ I +L + +I +
Sbjct: 320 DYTGRNPIWSFFYGILMFIQFLLTGPFTLTVFAGALGAYFAGTELYYLTSFFYVIAGLAL 379
Query: 227 PLHLLA-EKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPV 284
L+ +K+V KI++A G KA +SGGG+LP H+D F+ IG+ V GYG+TE+SPV
Sbjct: 380 LLNSFTLDKIVLAKIRAATGGQLKASISGGGALPRHVDEFFGNIGINVLEGYGMTETSPV 439
Query: 285 IAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA------------GSKGIVKVRGSQ 332
I+ R ++GSVG T+++I + + N VL G KG++ ++G Q
Sbjct: 440 ISVRTFEKLIIGSVGVIAPKTKLQIRN-DNNAVLTEMDENGKITQGKLGLKGVLFIKGPQ 498
Query: 333 VMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLST 392
VM+GYFKN AT +A+ DGW+NTGD+G I + L L GRAKDT+VL
Sbjct: 499 VMKGYFKNEEATSKAI-TDGWMNTGDMGMINFKKT----------LTLTGRAKDTVVLLG 547
Query: 393 GENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASEL 452
GENVEP+ +E S+ I Q +VIGQDQ+ GAI+VPD E++ A+ I+ + +L
Sbjct: 548 GENVEPVPIENKLQESTYISQCMVIGQDQKNLGAIVVPDFEKLQEWAQENGIIETNKDKL 607
Query: 453 SKEKTISLLY-GELRKW-TSKCSF----QIGPIHVVDEPFTV 488
+ + LY E++ +K F Q+ P ++ +PF V
Sbjct: 608 IENPRVYDLYRKEIKALNNTKNGFKSFEQVTPFILISKPFEV 649
>gi|398345147|ref|ZP_10529850.1| long-chain-fatty-acid CoA ligase [Leptospira inadai serovar Lyme
str. 10]
Length = 679
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 174/490 (35%), Positives = 261/490 (53%), Gaps = 70/490 (14%)
Query: 56 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYER 115
I +D+ T +YTSGTTG PKGV L H N++HQ+ ++ ++ + LS+LP WHV+ER
Sbjct: 173 IKPEDLFTLIYTSGTTGLPKGVQLMHSNMMHQVLNVTPMLKINAEARLLSILPVWHVFER 232
Query: 116 ACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 175
Y S G YT VR+L+ DL +P +M S P ++E +Y+GI +I
Sbjct: 233 VVEYVCISIGATTYYTNVRDLRQDLATVKPTFMGSAPRLWENIYNGIYTRI-NDPGQTPA 291
Query: 176 VARALIRISFAYT----AFKRIYEGFCLTRNQKQP--SY---LVALIDWLWA-----RII 221
RAL ++++ ++ A R G + + + P S+ ++ +I +L II
Sbjct: 292 FRRALFKLAYFFSDKNNASTRFLSGNEVDYHGRNPVKSFFYGILMVIQYLLTGPFTLSII 351
Query: 222 CAIL-------------WPLHLLA-----------EKLVYKKIQSAIGIS-KAGVSGGGS 256
AI +PL++++ +K+V KI++A G + +A +SGGG+
Sbjct: 352 TAIAAYTLAPTSFGYLSFPLYIVSGLALFLNSVALDKVVLSKIRTATGGNLRASISGGGA 411
Query: 257 LPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNE 316
LP H+D F+ IG+ V GYG+TE+SPV++ R ++GSVG + T ++I + + N+
Sbjct: 412 LPRHVDEFFNNIGINVLEGYGMTETSPVLSVRTFQKLIIGSVGSIVPKTRLQIRN-DNND 470
Query: 317 VLPA------------GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAP 364
VL G KG+V V+G QVM+GYFKN AT + L DGW+NTGD+G I
Sbjct: 471 VLTEVDEGGHITQGKLGRKGVVFVKGPQVMKGYFKNDEATAKTL-VDGWMNTGDMGMINF 529
Query: 365 HHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRP 424
+ L L GRAKDT+VL GENVEP+ +E S I Q +VIGQDQ+
Sbjct: 530 KRT----------LTLTGRAKDTVVLLGGENVEPVPIENKLQESPYISQCMVIGQDQKNL 579
Query: 425 GAIIVPDKEEVLMAAKRLSIVHADASEL-SKEKTISLLYGELRKWTS-----KCSFQIGP 478
GAII+PD E++ AK I AD +L K I E++ + K Q+ P
Sbjct: 580 GAIIIPDFEKLGEWAKENGIDVADREKLIENPKIIDFYRKEIKNLNNAKNGFKSFEQVTP 639
Query: 479 IHVVDEPFTV 488
++ +PF V
Sbjct: 640 FFLITKPFEV 649
>gi|386074346|ref|YP_005988663.1| long-chain-fatty-acid CoA ligase [Leptospira interrogans serovar
Lai str. IPAV]
gi|353458135|gb|AER02680.1| long-chain-fatty-acid CoA ligase [Leptospira interrogans serovar
Lai str. IPAV]
Length = 681
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 180/522 (34%), Positives = 269/522 (51%), Gaps = 74/522 (14%)
Query: 24 VFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKN 83
V E+I+ G+ R S + R I +D+ +YTSGTTG PKGVML H N
Sbjct: 145 VLKMQELIEKGKALRAGGSKKAEER----IAAIDPEDLFALIYTSGTTGLPKGVMLKHSN 200
Query: 84 LLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRY 143
++HQ+ + ++ + G + LS+LP WHV+ER Y G YT VR+L+ DL
Sbjct: 201 MMHQVNYVSPMLDIKAGARLLSILPIWHVFERVVEYVCIGLGAATYYTNVRDLRQDLATV 260
Query: 144 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFK----RIYEGFCL 199
+P +M S P ++E +Y+GI +I A + R L ++++ ++ K R +G +
Sbjct: 261 KPTFMGSAPRLWENIYNGIYTRI-NDPAQTPALRRGLFKLAYFFSRKKNQALRFLKGIEV 319
Query: 200 TRNQKQP--SY-----------------LVALIDWLWARIICAILW----PLHLLA---- 232
+ P S+ L L L A L+ P + +A
Sbjct: 320 DYTGRNPIVSFFYGILMFFQFLLTGPFTLTVLAGALGAYFAGTELYFLTSPFYTVAGLAL 379
Query: 233 -------EKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPV 284
+K+V KI++A G +A +SGGG+LP H+D F+ IG+ V GYG+TE+SPV
Sbjct: 380 VLNSFTLDKVVLAKIRAATGGQLEASISGGGALPRHVDEFFGNIGINVLEGYGMTETSPV 439
Query: 285 IAARRPTCNVLGSVGHPINHTEIKIVDAETNEVL------------PAGSKGIVKVRGSQ 332
I+ R ++GSVG + T ++I + + N VL G KG+V ++G Q
Sbjct: 440 ISVRTFEKLIIGSVGVIVPKTRLQIRN-DNNAVLTEIDESGNITQGKMGLKGVVFIKGPQ 498
Query: 333 VMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLST 392
VM+GYFKN AT +A+ DGW+NTGD+G I + L L GRAKDT+VL
Sbjct: 499 VMKGYFKNEEATSKAIS-DGWMNTGDMGMINFKKT----------LTLTGRAKDTVVLLG 547
Query: 393 GENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASEL 452
GENVEP+ +E S+ I Q +VIGQDQ+ GAI+VPD E++ AK I ++ +L
Sbjct: 548 GENVEPVPIENKLQESAYISQCMVIGQDQKNLGAIVVPDFEKLQEWAKENGINESNNEKL 607
Query: 453 SKEKTISLLY-GELRKW-TSKCSF----QIGPIHVVDEPFTV 488
+ I LY E++ +K F Q+ P ++ +PF V
Sbjct: 608 IENPKIYDLYRKEIKALNNTKNGFKSFEQVTPFILISKPFEV 649
>gi|410450361|ref|ZP_11304402.1| AMP-binding enzyme [Leptospira sp. Fiocruz LV3954]
gi|410015874|gb|EKO77965.1| AMP-binding enzyme [Leptospira sp. Fiocruz LV3954]
gi|456875112|gb|EMF90343.1| AMP-binding enzyme [Leptospira santarosai str. ST188]
Length = 682
Score = 259 bits (663), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 177/524 (33%), Positives = 272/524 (51%), Gaps = 78/524 (14%)
Query: 24 VFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKN 83
V ++I+ G++ R S + R I S+D+ T +YTSGTTG PKGVML H N
Sbjct: 146 VLKMRDLIEKGKKLRANGSQKAEER----IAAIDSEDLFTLIYTSGTTGLPKGVMLKHSN 201
Query: 84 LLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRY 143
++HQI+ + ++ + + LS+LP WHV+ER Y G YT VR+L+ DL
Sbjct: 202 MMHQIKYVSPMLDINSEARLLSILPIWHVFERVVEYVCIGLGAATYYTNVRDLRQDLATV 261
Query: 144 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFK----RIYEGFCL 199
+P +M S P ++E +Y+GI +I A R L ++++ ++ K R +G +
Sbjct: 262 KPTFMGSAPRLWENIYNGIYTRI-NDPAQTPAFRRGLFKLAYFFSRKKNQAFRFLKGIEV 320
Query: 200 TRNQKQP--SYLVALIDWLWARIICAILWPLHLLA------------------------- 232
+ P S+ ++ ++ + + + L +LA
Sbjct: 321 DYTGRNPIASFFYGIL--MFVQFLLTGPFTLTVLAGVFGVYLAGTELYYLTSFFYTVAGL 378
Query: 233 ---------EKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESS 282
+K+V KI++A G KA +SGGG+LP H+D F+ IG+ V GYG+TE+S
Sbjct: 379 AFFLNSFTLDKIVLSKIRAATGGQLKASISGGGALPRHVDEFFGNIGINVLEGYGMTETS 438
Query: 283 PVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA------------GSKGIVKVRG 330
PVI+ R ++GSVG T+++I + + N VL G KG+V V+G
Sbjct: 439 PVISVRTFEKLIIGSVGVIAPKTKLQIRN-DNNAVLTEIDENGNITQGKLGLKGVVFVKG 497
Query: 331 SQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVL 390
QVM+GYFKN AT +A+ DGW+NTGD+G I + L L GRAKDT+VL
Sbjct: 498 PQVMKGYFKNEEATSKAII-DGWMNTGDMGMINFKKT----------LTLTGRAKDTVVL 546
Query: 391 STGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADAS 450
GENVEP+ +E S+ I Q +VIGQDQ+ GAI+VPD E++ A+ I +
Sbjct: 547 LGGENVEPVPIENKLQESTYISQCMVIGQDQKNLGAIVVPDFEKLQEWAQENGINETNKD 606
Query: 451 ELSKEKTISLLY-GELRKW-TSKCSF----QIGPIHVVDEPFTV 488
+L + + + LY E++ +K F Q+ P ++ +PF V
Sbjct: 607 KLIENQKVYDLYRKEIKALNNTKNGFKSFEQVTPFILISKPFEV 650
>gi|42527248|ref|NP_972346.1| AMP-binding protein [Treponema denticola ATCC 35405]
gi|41817672|gb|AAS12257.1| AMP-binding enzyme family protein [Treponema denticola ATCC 35405]
Length = 641
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 159/447 (35%), Positives = 241/447 (53%), Gaps = 27/447 (6%)
Query: 21 EIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLT 80
+I +Y +IIDLG+ +R + E + +DD+A+ ++TSGTTGNPKGV +T
Sbjct: 157 KIEFHTYADIIDLGKSARI----EGKFKPEEYAENVDTDDLASIIFTSGTTGNPKGVTMT 212
Query: 81 HKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN--LKD 138
H+N + Q+ L D + + G K +S+LP WH +ERAC Y I G + Y+ L
Sbjct: 213 HRNFMTQLMELPDRIILKPGQKAISVLPVWHSFERACEYVIIISGGTIAYSKPIGSVLLA 272
Query: 139 DLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFC 198
D+ + P SVP ++E +Y GI K + + I + KR G C
Sbjct: 273 DMVKINPTLFPSVPRIWEAVYDGIFKAMKKRGRPLYYLFLFFIEVGIKTMRLKRRVTGQC 332
Query: 199 --LTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIG-ISKAGVSGGG 255
R K ++A++ L C + PL+ + + L+Y+ I+ G +AGVSGGG
Sbjct: 333 PHFQRKTKVIYPILAVLPLL-----C--IAPLYYIGDLLIYRAIRKKFGKCFRAGVSGGG 385
Query: 256 SLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETN 315
+LP ++D F+ AI + V GYG+TE++PVI+ R V G++G P+ E KI+D
Sbjct: 386 ALPPNVDEFFWAIRINVMEGYGITETAPVISVRPMPKPVFGTLGKPLACFESKIIDKNGK 445
Query: 316 EVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCG 375
E LP KG++ VRG V +GY+K+P T + +D+DGW +TGD+ +
Sbjct: 446 E-LPHNRKGLLLVRGDAVTKGYYKDPERTAEVIDKDGWFDTGDLAI----------KTVD 494
Query: 376 GVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 435
G L+L+GR K+TIVL GEN+EP+ +E S LI VV+GQDQR GA+IV KE +
Sbjct: 495 GELILKGRKKNTIVLRGGENIEPVPIEVKLQESPLISLAVVLGQDQRSLGALIVVHKENL 554
Query: 436 LMAAKRLSIVHADASELSKEKTISLLY 462
A + + +EL + + +Y
Sbjct: 555 QSWAANNGLRNVPVTELIHDSNVQKMY 581
>gi|418746716|ref|ZP_13303036.1| AMP-binding enzyme [Leptospira santarosai str. CBC379]
gi|410792425|gb|EKR90360.1| AMP-binding enzyme [Leptospira santarosai str. CBC379]
Length = 682
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 177/524 (33%), Positives = 272/524 (51%), Gaps = 78/524 (14%)
Query: 24 VFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKN 83
V ++I+ G++ R S + R I S+D+ T +YTSGTTG PKGVML H N
Sbjct: 146 VLKMRDLIEKGKKLRANGSQKAEER----IAAIDSEDLFTLIYTSGTTGLPKGVMLKHSN 201
Query: 84 LLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRY 143
++HQI+ + ++ + + LS+LP WHV+ER Y G YT VR+L+ DL
Sbjct: 202 MMHQIKYVSPMLDINSEARLLSILPIWHVFERVVEYVCIGLGAATYYTNVRDLRQDLATV 261
Query: 144 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFK----RIYEGFCL 199
+P +M S P ++E +Y+GI +I A R L ++++ ++ K R +G +
Sbjct: 262 KPTFMGSAPRLWENIYNGIYTRI-NDPAQTPAFRRGLFKLAYFFSRKKNQAFRFLKGIEV 320
Query: 200 TRNQKQP--SYLVALIDWLWARIICAILWPLHLLA------------------------- 232
+ P S+ ++ ++ + + + L +LA
Sbjct: 321 DYTGRNPIASFFYGIL--MFVQFLLTGPFTLTVLAGVFGVYLAGTELYYLTSFFYTVAGL 378
Query: 233 ---------EKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESS 282
+K+V KI++A G KA +SGGG+LP H+D F+ IG+ V GYG+TE+S
Sbjct: 379 AFFLNSFTLDKIVLSKIRAATGGQLKASISGGGALPRHVDEFFGNIGINVLEGYGMTETS 438
Query: 283 PVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA------------GSKGIVKVRG 330
PVI+ R ++GSVG T+++I + + N VL G KG+V V+G
Sbjct: 439 PVISVRTFEKLIIGSVGVIAPKTKLQIRN-DNNAVLTEIDENGNITQGKLGLKGVVFVKG 497
Query: 331 SQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVL 390
QVM+GYFKN AT +A+ DGW+NTGD+G I + L L GRAKDT+VL
Sbjct: 498 PQVMKGYFKNEEATSKAII-DGWMNTGDMGMINFKKT----------LTLTGRAKDTVVL 546
Query: 391 STGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADAS 450
GENVEP+ +E S+ I Q +VIGQDQ+ GAI+VPD E++ A+ I +
Sbjct: 547 LGGENVEPVPIENKLQESTYISQCMVIGQDQKNLGAIVVPDFEKLQEWAQENGINETNKD 606
Query: 451 ELSKEKTISLLY-GELRKW-TSKCSF----QIGPIHVVDEPFTV 488
+L + + + LY E++ +K F Q+ P ++ +PF V
Sbjct: 607 KLIENQKVYDLYRKEIKALNNTKNGFKSFEQVTPFILISKPFEV 650
>gi|116328213|ref|YP_797933.1| long-chain-fatty-acid--CoA ligase [Leptospira borgpetersenii
serovar Hardjo-bovis str. L550]
gi|116120957|gb|ABJ79000.1| Long-chain-fatty-acid--CoA ligase [Leptospira borgpetersenii
serovar Hardjo-bovis str. L550]
Length = 681
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 176/522 (33%), Positives = 271/522 (51%), Gaps = 74/522 (14%)
Query: 24 VFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKN 83
V ++I+ G++ R S + R I S+D+ T +YTSGTTG PKGVML H N
Sbjct: 145 VLKMQDLIEKGKKLRTDGSRKAEER----VSAIDSEDLFTLIYTSGTTGLPKGVMLKHSN 200
Query: 84 LLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRY 143
++HQI+ + ++ + + LS+LP WHV+ER Y G YT VR+L+ DL
Sbjct: 201 MMHQIKYVSPMLDINSEARLLSILPIWHVFERVVEYVCIGLGAATYYTNVRDLRQDLATV 260
Query: 144 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFK----RIYEGFCL 199
+P +M S P ++E +Y+GI +I A R L R+++ ++ K R +G +
Sbjct: 261 KPTFMGSAPRLWENIYNGIYTRI-NDPAQTPAFRRGLFRLAYFFSRKKNQALRFLKGIEV 319
Query: 200 TRNQKQPSY-----LVALIDWL----------------------------WARIICAILW 226
+ P + ++ I +L + +I +
Sbjct: 320 DYTGRNPIWSFFYGILMFIQFLLTGPFTLTVFAGALGAYFAGTELYYLTSFFYVIAGLAL 379
Query: 227 PLHLLA-EKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPV 284
L+ +K+V KI++A G KA +SGGG+LP H+D F+ IG+ V GYG+TE+SPV
Sbjct: 380 LLNSFTLDKIVLAKIRAATGGQLKASISGGGALPRHVDEFFGNIGINVLEGYGMTETSPV 439
Query: 285 IAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA------------GSKGIVKVRGSQ 332
I+ R ++GSVG T+++I + + N VL G KG++ ++G Q
Sbjct: 440 ISVRTFEKLIIGSVGVIAPKTKLQIRN-DNNAVLTEMDENGKITQGKLGLKGVLFIKGPQ 498
Query: 333 VMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLST 392
VM+GYFKN AT +A+ DGW+NTGD+G I + L L GRAKDT+VL
Sbjct: 499 VMKGYFKNEEATSKAI-TDGWMNTGDMGMINFKKT----------LTLTGRAKDTVVLLG 547
Query: 393 GENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASEL 452
GENVEP+ +E S+ I Q +VIGQDQ+ GAI+VPD E++ A+ I+ + +L
Sbjct: 548 GENVEPVPIENKLQESTYISQCMVIGQDQKNLGAIVVPDFEKLQEWAQENGIIETNKDKL 607
Query: 453 SKEKTISLLY-GELRKW-TSKCSF----QIGPIHVVDEPFTV 488
+ + LY E++ +K F Q+ P ++ +PF V
Sbjct: 608 IENPRVYDLYRKEIKALNNTKNGFKSFEQVTPFILISKPFEV 649
>gi|449111695|ref|ZP_21748264.1| hypothetical protein HMPREF9735_01313 [Treponema denticola ATCC
33521]
gi|449113498|ref|ZP_21750003.1| hypothetical protein HMPREF9721_00521 [Treponema denticola ATCC
35404]
gi|448956966|gb|EMB37719.1| hypothetical protein HMPREF9735_01313 [Treponema denticola ATCC
33521]
gi|448959708|gb|EMB40427.1| hypothetical protein HMPREF9721_00521 [Treponema denticola ATCC
35404]
Length = 616
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 159/447 (35%), Positives = 241/447 (53%), Gaps = 27/447 (6%)
Query: 21 EIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLT 80
+I +Y +IIDLG+ +R + E + +DD+A+ ++TSGTTGNPKGV +T
Sbjct: 132 KIEFHTYADIIDLGKSARI----EGKFKPEEYAENVDTDDLASIIFTSGTTGNPKGVTMT 187
Query: 81 HKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN--LKD 138
H+N + Q+ L D + + G K +S+LP WH +ERAC Y I G + Y+ L
Sbjct: 188 HRNFMTQLMELPDRIILKPGQKAISVLPVWHSFERACEYVIIISGGTIAYSKPIGSVLLA 247
Query: 139 DLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFC 198
D+ + P SVP ++E +Y GI K + + I + KR G C
Sbjct: 248 DMVKINPTLFPSVPRIWEAVYDGIFKAMKKRGRPLYYLFLFFIEVGIKTMRLKRRVTGQC 307
Query: 199 --LTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIG-ISKAGVSGGG 255
R K ++A++ L C + PL+ + + L+Y+ I+ G +AGVSGGG
Sbjct: 308 PHFQRKTKVIYPILAVLPLL-----C--IAPLYYIGDLLIYRAIRKKFGKCFRAGVSGGG 360
Query: 256 SLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETN 315
+LP ++D F+ AI + V GYG+TE++PVI+ R V G++G P+ E KI+D
Sbjct: 361 ALPPNVDEFFWAIRINVMEGYGITETAPVISVRPMPKPVFGTLGKPLACFESKIIDKNGK 420
Query: 316 EVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCG 375
E LP KG++ VRG V +GY+K+P T + +D+DGW +TGD+ +
Sbjct: 421 E-LPHNRKGLLLVRGDAVTKGYYKDPERTAEVIDKDGWFDTGDLAI----------KTVD 469
Query: 376 GVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 435
G L+L+GR K+TIVL GEN+EP+ +E S LI VV+GQDQR GA+IV KE +
Sbjct: 470 GELILKGRKKNTIVLRGGENIEPVPIEVKLQESPLISLAVVLGQDQRSLGALIVVHKENL 529
Query: 436 LMAAKRLSIVHADASELSKEKTISLLY 462
A + + +EL + + +Y
Sbjct: 530 QSWAANNGLRNVPVTELIHDSNVQKMY 556
>gi|418755411|ref|ZP_13311616.1| AMP-binding enzyme [Leptospira santarosai str. MOR084]
gi|409964206|gb|EKO32098.1| AMP-binding enzyme [Leptospira santarosai str. MOR084]
Length = 681
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 177/524 (33%), Positives = 272/524 (51%), Gaps = 78/524 (14%)
Query: 24 VFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKN 83
V ++I+ G++ R S + R I S+D+ T +YTSGTTG PKGVML H N
Sbjct: 145 VLKMRDLIEKGKKLRANGSQKAEER----IAAIDSEDLFTLIYTSGTTGLPKGVMLKHSN 200
Query: 84 LLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRY 143
++HQI+ + ++ + + LS+LP WHV+ER Y G YT VR+L+ DL
Sbjct: 201 MMHQIKYVSPMLDINSEARLLSILPIWHVFERVVEYVCIGLGAATYYTNVRDLRQDLATV 260
Query: 144 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFK----RIYEGFCL 199
+P +M S P ++E +Y+GI +I A R L ++++ ++ K R +G +
Sbjct: 261 KPTFMGSAPRLWENIYNGIYTRI-NDPAQTPAFRRGLFKLAYFFSRKKNQAFRFLKGIEV 319
Query: 200 TRNQKQP--SYLVALIDWLWARIICAILWPLHLLA------------------------- 232
+ P S+ ++ ++ + + + L +LA
Sbjct: 320 DYTGRNPIASFFYGIL--MFVQFLLTGPFTLTVLAGAFGVYLAGTELYYLTSFFYTVAGL 377
Query: 233 ---------EKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESS 282
+K+V KI++A G KA +SGGG+LP H+D F+ IG+ V GYG+TE+S
Sbjct: 378 AFFLNSFTLDKIVLSKIRAATGGQLKASISGGGALPRHVDEFFGNIGINVLEGYGMTETS 437
Query: 283 PVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA------------GSKGIVKVRG 330
PVI+ R ++GSVG T+++I + + N VL G KG+V V+G
Sbjct: 438 PVISVRTFEKLIIGSVGVIAPKTKLQIRN-DNNAVLTEIDENGNITQGKLGLKGVVFVKG 496
Query: 331 SQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVL 390
QVM+GYFKN AT +A+ DGW+NTGD+G I + L L GRAKDT+VL
Sbjct: 497 PQVMKGYFKNEEATSKAII-DGWMNTGDMGMINFKKT----------LTLTGRAKDTVVL 545
Query: 391 STGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADAS 450
GENVEP+ +E S+ I Q +VIGQDQ+ GAI+VPD E++ A+ I +
Sbjct: 546 LGGENVEPVPIENKLQESTYISQCMVIGQDQKNLGAIVVPDFEKLQEWAQENGINETNKD 605
Query: 451 ELSKEKTISLLY-GELRKW-TSKCSF----QIGPIHVVDEPFTV 488
+L + + + LY E++ +K F Q+ P ++ +PF V
Sbjct: 606 KLIENQKVYDLYRKEIKALNNTKNGFKSFEQVTPFILISKPFEV 649
>gi|422004329|ref|ZP_16351549.1| long-chain-fatty-acid--CoA ligase [Leptospira santarosai serovar
Shermani str. LT 821]
gi|417256998|gb|EKT86406.1| long-chain-fatty-acid--CoA ligase [Leptospira santarosai serovar
Shermani str. LT 821]
Length = 681
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 177/524 (33%), Positives = 272/524 (51%), Gaps = 78/524 (14%)
Query: 24 VFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKN 83
V ++I+ G++ R S + R I S+D+ T +YTSGTTG PKGVML H N
Sbjct: 145 VLKMRDLIEKGKKLRANGSQKAEER----IAAIDSEDLFTLIYTSGTTGLPKGVMLKHSN 200
Query: 84 LLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRY 143
++HQI+ + ++ + + LS+LP WHV+ER Y G YT VR+L+ DL
Sbjct: 201 MMHQIKYVSPMLDINSEARLLSILPIWHVFERVVEYVCIGLGAATYYTNVRDLRQDLATV 260
Query: 144 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFK----RIYEGFCL 199
+P +M S P ++E +Y+GI +I A R L ++++ ++ K R +G +
Sbjct: 261 KPTFMGSAPRLWENIYNGIYTRI-NDPAQTPAFRRGLFKLAYFFSRKKNQAFRFLKGIEV 319
Query: 200 TRNQKQP--SYLVALIDWLWARIICAILWPLHLLA------------------------- 232
+ P S+ ++ ++ + + + L +LA
Sbjct: 320 DYTGRNPIASFFYGIL--MFVQFLLTGPFTLTVLAGVFGVYLAGTELYYLTSFFYTVAGL 377
Query: 233 ---------EKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESS 282
+K+V KI++A G KA +SGGG+LP H+D F+ IG+ V GYG+TE+S
Sbjct: 378 AFLLNSFTLDKIVLSKIRAATGGQLKASISGGGALPRHVDEFFGNIGINVLEGYGMTETS 437
Query: 283 PVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA------------GSKGIVKVRG 330
PVI+ R ++GSVG T+++I + + N VL G KG+V V+G
Sbjct: 438 PVISVRTFEKLIIGSVGVIAPKTKLQIRN-DNNAVLTEIDENGNITQGKLGLKGVVFVKG 496
Query: 331 SQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVL 390
QVM+GYFKN AT +A+ DGW+NTGD+G I + L L GRAKDT+VL
Sbjct: 497 PQVMKGYFKNEEATSKAII-DGWMNTGDMGMINFKKT----------LTLTGRAKDTVVL 545
Query: 391 STGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADAS 450
GENVEP+ +E S+ I Q +VIGQDQ+ GAI+VPD E++ A+ I +
Sbjct: 546 LGGENVEPVPIENKLQESTYISQCMVIGQDQKNLGAIVVPDFEKLQEWAQENGINETNKD 605
Query: 451 ELSKEKTISLLY-GELRKW-TSKCSF----QIGPIHVVDEPFTV 488
+L + + + LY E++ +K F Q+ P ++ +PF V
Sbjct: 606 KLIENQKVYDLYRKEIKALNNTKNGFKSFEQVTPFILISKPFEV 649
>gi|359685931|ref|ZP_09255932.1| long-chain-fatty-acid--CoA ligase [Leptospira santarosai str.
2000030832]
Length = 681
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 177/524 (33%), Positives = 272/524 (51%), Gaps = 78/524 (14%)
Query: 24 VFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKN 83
V ++I+ G++ R S + R I S+D+ T +YTSGTTG PKGVML H N
Sbjct: 145 VLKMRDLIEKGKKLRANGSQKAEER----IAAIDSEDLFTLIYTSGTTGLPKGVMLKHSN 200
Query: 84 LLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRY 143
++HQI+ + ++ + + LS+LP WHV+ER Y G YT VR+L+ DL
Sbjct: 201 MMHQIKYVSPMLDINSEARLLSILPIWHVFERVVEYVCIGLGAATYYTNVRDLRQDLATV 260
Query: 144 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFK----RIYEGFCL 199
+P +M S P ++E +Y+GI +I A R L ++++ ++ K R +G +
Sbjct: 261 KPTFMGSAPRLWENIYNGIYTRI-NDPAQTPAFRRGLFKLAYFFSRKKNQAFRFLKGIEV 319
Query: 200 TRNQKQP--SYLVALIDWLWARIICAILWPLHLLA------------------------- 232
+ P S+ ++ ++ + + + L +LA
Sbjct: 320 DYTGRNPIASFFYGIL--MFVQFLLTGPFTLTVLAGVFGVYLAGTELYYLTSFFYTVAGL 377
Query: 233 ---------EKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESS 282
+K+V KI++A G KA +SGGG+LP H+D F+ IG+ V GYG+TE+S
Sbjct: 378 AFLLNSFTLDKIVLSKIRAATGGQLKASISGGGALPRHVDEFFGNIGINVLEGYGMTETS 437
Query: 283 PVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA------------GSKGIVKVRG 330
PVI+ R ++GSVG T+++I + + N VL G KG+V V+G
Sbjct: 438 PVISVRTFEKLIIGSVGVIAPKTKLQIRN-DNNAVLTEIDENGNITQGKLGLKGVVFVKG 496
Query: 331 SQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVL 390
QVM+GYFKN AT +A+ DGW+NTGD+G I + L L GRAKDT+VL
Sbjct: 497 PQVMKGYFKNEEATSKAII-DGWMNTGDMGMINFKKT----------LTLTGRAKDTVVL 545
Query: 391 STGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADAS 450
GENVEP+ +E S+ I Q +VIGQDQ+ GAI+VPD E++ A+ I +
Sbjct: 546 LGGENVEPVPIENKLQESTYISQCMVIGQDQKNLGAIVVPDFEKLQEWAQENGINETNKD 605
Query: 451 ELSKEKTISLLY-GELRKW-TSKCSF----QIGPIHVVDEPFTV 488
+L + + + LY E++ +K F Q+ P ++ +PF V
Sbjct: 606 KLIENQKVYDLYRKEIKALNNTKNGFKSFEQVTPFILISKPFEV 649
>gi|449107587|ref|ZP_21744240.1| hypothetical protein HMPREF9729_02505 [Treponema denticola ASLM]
gi|451969280|ref|ZP_21922509.1| hypothetical protein HMPREF9728_01703 [Treponema denticola US-Trep]
gi|448961541|gb|EMB42241.1| hypothetical protein HMPREF9729_02505 [Treponema denticola ASLM]
gi|451701884|gb|EMD56329.1| hypothetical protein HMPREF9728_01703 [Treponema denticola US-Trep]
Length = 616
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 159/447 (35%), Positives = 241/447 (53%), Gaps = 27/447 (6%)
Query: 21 EIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLT 80
+I +Y +IIDLG+ +R + E + +DD+A+ ++TSGTTGNPKGV +T
Sbjct: 132 KIEFHTYADIIDLGKSARI----EGKFKPEEYAENVDTDDLASIIFTSGTTGNPKGVTMT 187
Query: 81 HKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN--LKD 138
H+N + Q+ L D + + G K +S+LP WH +ERAC Y I G + Y+ L
Sbjct: 188 HRNFMTQLMELPDRIILKPGQKAISVLPVWHSFERACEYVIIISGGTIAYSKPIGSVLLA 247
Query: 139 DLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFC 198
D+ + P SVP ++E +Y GI K + + I + KR G C
Sbjct: 248 DMVKINPTLFPSVPRIWEAVYGGIFKAMKKRGRPLYYLFLFFIEVGIKTMRLKRRVTGQC 307
Query: 199 --LTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIG-ISKAGVSGGG 255
R K ++A++ L C + PL+ + + L+Y+ I+ G +AGVSGGG
Sbjct: 308 PHFQRKTKVIYPILAVLPLL-----C--IAPLYYIGDLLIYRAIRKKFGKCFRAGVSGGG 360
Query: 256 SLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETN 315
+LP ++D F+ AI + V GYG+TE++PVI+ R V G++G P+ E KI+D
Sbjct: 361 ALPPNVDEFFWAIRINVMEGYGITETAPVISVRPMPKPVFGTLGKPLACFESKIIDKNGK 420
Query: 316 EVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCG 375
E LP KG++ VRG V +GY+K+P T + +D+DGW +TGD+ +
Sbjct: 421 E-LPHNRKGLLLVRGDAVTKGYYKDPERTAEVIDKDGWFDTGDLAI----------KTVD 469
Query: 376 GVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 435
G L+L+GR K+TIVL GEN+EP+ +E S LI VV+GQDQR GA+IV KE +
Sbjct: 470 GELILKGRKKNTIVLRGGENIEPVPIEVKLQESPLISLAVVLGQDQRSLGALIVVHKENL 529
Query: 436 LMAAKRLSIVHADASELSKEKTISLLY 462
A + + +EL + + +Y
Sbjct: 530 QSWAANNGLRNVPVTELIHDSNVQKMY 556
>gi|422342229|ref|ZP_16423169.1| AMP-binding enzyme family protein [Treponema denticola F0402]
gi|325474297|gb|EGC77485.1| AMP-binding enzyme family protein [Treponema denticola F0402]
Length = 641
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 159/447 (35%), Positives = 241/447 (53%), Gaps = 27/447 (6%)
Query: 21 EIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLT 80
+I +Y +IIDLG+ +R + E + +DD+A+ ++TSGTTGNPKGV +T
Sbjct: 157 KIEFHTYADIIDLGKSARI----EGKFKPEEYAENVDTDDLASIIFTSGTTGNPKGVTMT 212
Query: 81 HKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN--LKD 138
H+N + Q+ L D + + G K +S+LP WH +ERAC Y I G + Y+ L
Sbjct: 213 HRNFMTQLMELPDRIILKPGQKAISVLPVWHSFERACEYVIIISGGTIAYSKPIGSVLLA 272
Query: 139 DLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFC 198
D+ + P SVP ++E +Y GI K + + I + KR G C
Sbjct: 273 DMVKINPTLFPSVPRIWEAVYDGIFKAMKKRGRPLYYLFLFFIEVGIKTMRLKRRVTGQC 332
Query: 199 --LTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIG-ISKAGVSGGG 255
R K ++A++ L C + PL+ + + L+Y+ I+ G +AGVSGGG
Sbjct: 333 PHFQRKTKVIYPILAVLPLL-----C--IAPLYYIGDLLIYRAIRKKFGKCFRAGVSGGG 385
Query: 256 SLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETN 315
+LP ++D F+ AI + V GYG+TE++PVI+ R V G++G P+ E KI+D
Sbjct: 386 ALPPNVDEFFWAIRINVMEGYGITETAPVISVRPMPKPVFGTLGKPLACFESKIIDKNGK 445
Query: 316 EVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCG 375
E LP KG++ VRG V +GY+K+P T + +D+DGW +TGD+ +
Sbjct: 446 E-LPHNRKGLLLVRGDAVTKGYYKDPERTAEVIDKDGWFDTGDLAI----------KTVD 494
Query: 376 GVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 435
G L+L+GR K+TIVL GEN+EP+ +E S LI VV+GQDQR GA+IV KE +
Sbjct: 495 GELILKGRKKNTIVLRGGENIEPVPIEVKLQESPLISIAVVLGQDQRSLGALIVVHKENL 554
Query: 436 LMAAKRLSIVHADASELSKEKTISLLY 462
A + + +EL + + +Y
Sbjct: 555 QSWAANNGLRNVPVTELIHDSNVQKMY 581
>gi|421113459|ref|ZP_15573903.1| AMP-binding enzyme [Leptospira santarosai str. JET]
gi|410801233|gb|EKS07407.1| AMP-binding enzyme [Leptospira santarosai str. JET]
Length = 681
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 177/524 (33%), Positives = 272/524 (51%), Gaps = 78/524 (14%)
Query: 24 VFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKN 83
V ++I+ G++ R S + R I S+D+ T +YTSGTTG PKGVML H N
Sbjct: 145 VLKMRDLIEKGKKLRANGSQKAEER----IAAIDSEDLFTLIYTSGTTGLPKGVMLKHSN 200
Query: 84 LLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRY 143
++HQI+ + ++ + + LS+LP WHV+ER Y G YT VR+L+ DL
Sbjct: 201 MMHQIKYVSPMLDINSEARLLSILPIWHVFERVVEYVCIGLGAATYYTNVRDLRQDLATV 260
Query: 144 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFK----RIYEGFCL 199
+P +M S P ++E +Y+GI +I A R L ++++ ++ K R +G +
Sbjct: 261 KPTFMGSAPRLWENIYNGIYTRI-NDPAQTPAFRRGLFKLAYFFSRKKNQAFRFLKGIEV 319
Query: 200 TRNQKQP--SYLVALIDWLWARIICAILWPLHLLA------------------------- 232
+ P S+ ++ ++ + + + L +LA
Sbjct: 320 DYTGRNPIASFFYGIL--MFVQFLLTGPFTLTVLAGVFGVYLAGTELYYLTSFFYTVAGL 377
Query: 233 ---------EKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESS 282
+K+V KI++A G KA +SGGG+LP H+D F+ IG+ V GYG+TE+S
Sbjct: 378 AFLLNSFTLDKVVLSKIRAATGGQLKASISGGGALPRHVDEFFGNIGINVLEGYGMTETS 437
Query: 283 PVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA------------GSKGIVKVRG 330
PVI+ R ++GSVG T+++I + + N VL G KG+V V+G
Sbjct: 438 PVISVRTFEKLIIGSVGVIAPKTKLQIRN-DNNAVLTEIDENGNITQGKLGLKGVVFVKG 496
Query: 331 SQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVL 390
QVM+GYFKN AT +A+ DGW+NTGD+G I + L L GRAKDT+VL
Sbjct: 497 PQVMKGYFKNEEATSKAII-DGWMNTGDMGMINFKKT----------LTLTGRAKDTVVL 545
Query: 391 STGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADAS 450
GENVEP+ +E S+ I Q +VIGQDQ+ GAI+VPD E++ A+ I +
Sbjct: 546 LGGENVEPVPIENKLQESTYISQCMVIGQDQKNLGAIVVPDFEKLQEWAQENGINETNKD 605
Query: 451 ELSKEKTISLLY-GELRKW-TSKCSF----QIGPIHVVDEPFTV 488
+L + + + LY E++ +K F Q+ P ++ +PF V
Sbjct: 606 KLIENQKVYDLYRKEIKALNNTKNGFKSFEQVTPFILISKPFEV 649
>gi|449102428|ref|ZP_21739177.1| hypothetical protein HMPREF9730_00074 [Treponema denticola AL-2]
gi|448966400|gb|EMB47056.1| hypothetical protein HMPREF9730_00074 [Treponema denticola AL-2]
Length = 616
Score = 259 bits (662), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 159/447 (35%), Positives = 241/447 (53%), Gaps = 27/447 (6%)
Query: 21 EIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLT 80
+I +Y +IIDLG+ +R + E + +DD+A+ ++TSGTTGNPKGV +T
Sbjct: 132 KIEFHTYADIIDLGKSARI----EGKFKPEEYAENVDTDDLASIIFTSGTTGNPKGVTMT 187
Query: 81 HKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN--LKD 138
H+N + Q+ L D + + G K +S+LP WH +ERAC Y I G + Y+ L
Sbjct: 188 HRNFMTQLMELPDRIILKPGQKAISVLPVWHSFERACEYVIIISGGTIAYSKPIGSVLLA 247
Query: 139 DLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFC 198
D+ + P SVP ++E +Y GI K + + I + KR G C
Sbjct: 248 DMVKINPTLFPSVPRIWEAVYDGIFKAMKKRGRPLYYLFLFFIEVGIKTMRLKRRVTGQC 307
Query: 199 --LTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIG-ISKAGVSGGG 255
R K ++A++ L C + PL+ + + L+Y+ I+ G +AGVSGGG
Sbjct: 308 PHFQRKTKVIYPILAVLPLL-----C--IAPLYYIGDLLIYRAIRKKFGKCFRAGVSGGG 360
Query: 256 SLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETN 315
+LP ++D F+ AI + V GYG+TE++PVI+ R V G++G P+ E KI+D
Sbjct: 361 ALPPNVDEFFWAIRINVMEGYGITETAPVISVRPMPKPVFGTLGKPLACFESKIIDKNGK 420
Query: 316 EVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCG 375
E LP KG++ VRG V +GY+K+P T + +D+DGW +TGD+ +
Sbjct: 421 E-LPHNRKGLLLVRGDAVTKGYYKDPERTAEVIDKDGWFDTGDLAI----------KTVD 469
Query: 376 GVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 435
G L+L+GR K+TIVL GEN+EP+ +E S LI VV+GQDQR GA+IV KE +
Sbjct: 470 GELILKGRKKNTIVLRGGENIEPVPIEVKLQESPLISIAVVLGQDQRSLGALIVVHKENL 529
Query: 436 LMAAKRLSIVHADASELSKEKTISLLY 462
A + + +EL + + +Y
Sbjct: 530 QSWAANNGLRNVPVTELIHDSNVQKMY 556
>gi|381180251|ref|ZP_09889093.1| AMP-dependent synthetase and ligase [Treponema saccharophilum DSM
2985]
gi|380767812|gb|EIC01809.1| AMP-dependent synthetase and ligase [Treponema saccharophilum DSM
2985]
Length = 636
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 148/422 (35%), Positives = 240/422 (56%), Gaps = 32/422 (7%)
Query: 22 IPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTH 81
+ +FS+++I+ GRE F+ +N + + + DD+AT ++TSGTTG PKGVML+H
Sbjct: 152 LSLFSFEQILSEGRE----FNAANPGKVEDEMDKGKWDDLATIIFTSGTTGKPKGVMLSH 207
Query: 82 KNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN--LKDD 139
N + Q+ + + + GD+ + +LP WH ++RA Y + ++ + Y+ L D
Sbjct: 208 GNFITQLDEVCERIYLYPGDRGMMVLPVWHAFQRAVEYVVLNQSATICYSKPVGPVLLAD 267
Query: 140 LQRYQPHYMISVPLVYETLYSGIQKQIFTSSAA-----RRVVARALIRISFAYTAFKRIY 194
L+ P + +VP V+E +Y GI + + + VA AL F R
Sbjct: 268 LKALNPQVLPAVPRVFEAVYDGIYRNMRKTGGIVLRLFNFFVAIALFHSKLDRVLFDRTT 327
Query: 195 EGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSG 253
R + P+++ I WL +C +P+ LL ++++KI+ +G + ++GV+G
Sbjct: 328 RYGMDKRWLQWPAFV---IPWL----VC---YPIKLLGGAMIFRKIRKMLGTNFRSGVAG 377
Query: 254 GGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAE 313
GG+LP +D F+ AIG+K+ GYGLTE++P+I+ R VLG+VG + ++VD
Sbjct: 378 GGALPPAVDKFFWAIGIKLVEGYGLTETAPIISVRPIDRPVLGNVGSAVRGISARVVDPL 437
Query: 314 TNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRR 373
T + L G KG+++V+G VM+GY+K P T +A+DE+GW +TGD+ + ++
Sbjct: 438 TRKPLKRGKKGVLEVKGGTVMKGYYKQPELTAKAIDENGWFDTGDLARLTANNE------ 491
Query: 374 CGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 433
+VL GR KDTIV + GENVEPL +E S I+ VV+GQDQR A++VP++
Sbjct: 492 ----IVLCGRVKDTIVQTGGENVEPLPIEMKMQESRFIKTAVVLGQDQRYLAALVVPEQS 547
Query: 434 EV 435
EV
Sbjct: 548 EV 549
>gi|449116076|ref|ZP_21752529.1| hypothetical protein HMPREF9726_00514 [Treponema denticola H-22]
gi|448954596|gb|EMB35373.1| hypothetical protein HMPREF9726_00514 [Treponema denticola H-22]
Length = 616
Score = 258 bits (660), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 159/447 (35%), Positives = 241/447 (53%), Gaps = 27/447 (6%)
Query: 21 EIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLT 80
+I +Y +IIDLG+ +R + E + +DD+A+ ++TSGTTGNPKGV +T
Sbjct: 132 KIEFHTYADIIDLGKSARI----EGKFKPEEYAENVDTDDLASIIFTSGTTGNPKGVTMT 187
Query: 81 HKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN--LKD 138
H+N + Q+ L D + + G K +S+LP WH +ERAC Y I G + Y+ L
Sbjct: 188 HRNFMIQLMELPDRIILKPGQKAISVLPVWHSFERACEYVIIISGGTIAYSKPIGSVLLA 247
Query: 139 DLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFC 198
D+ + P SVP ++E +Y GI K + + I + KR G C
Sbjct: 248 DMVKINPTLFPSVPRIWEAVYDGIFKAMKKRGRPLYYLFLFFIEVGIKTMRLKRRVTGQC 307
Query: 199 --LTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIG-ISKAGVSGGG 255
R K ++A++ L C + PL+ + + L+Y+ I+ G +AGVSGGG
Sbjct: 308 PHFQRKTKVIYPILAVLPLL-----C--IAPLYYIGDLLIYRAIRKKFGKCFRAGVSGGG 360
Query: 256 SLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETN 315
+LP ++D F+ AI + V GYG+TE++PVI+ R V G++G P+ E KI+D
Sbjct: 361 ALPPNVDEFFWAIRINVMEGYGITETAPVISVRPMPKPVFGTLGKPLACFESKIIDKNGK 420
Query: 316 EVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCG 375
E LP KG++ VRG V +GY+K+P T + +D+DGW +TGD+ +
Sbjct: 421 E-LPHNRKGLLLVRGDAVTKGYYKDPERTAEVIDKDGWFDTGDLAI----------KTVD 469
Query: 376 GVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 435
G L+L+GR K+TIVL GEN+EP+ +E S LI VV+GQDQR GA+IV KE +
Sbjct: 470 GELILKGRKKNTIVLRGGENIEPVPIEVKLQESPLISIAVVLGQDQRSLGALIVVHKENL 529
Query: 436 LMAAKRLSIVHADASELSKEKTISLLY 462
A + + +EL + + +Y
Sbjct: 530 QSWAANNGLRNVPVTELIHDSNVQKMY 556
>gi|449109188|ref|ZP_21745826.1| hypothetical protein HMPREF9722_01522 [Treponema denticola ATCC
33520]
gi|449119875|ref|ZP_21756266.1| hypothetical protein HMPREF9725_01731 [Treponema denticola H1-T]
gi|449122271|ref|ZP_21758615.1| hypothetical protein HMPREF9727_01375 [Treponema denticola MYR-T]
gi|448948751|gb|EMB29584.1| hypothetical protein HMPREF9727_01375 [Treponema denticola MYR-T]
gi|448948874|gb|EMB29704.1| hypothetical protein HMPREF9725_01731 [Treponema denticola H1-T]
gi|448959834|gb|EMB40552.1| hypothetical protein HMPREF9722_01522 [Treponema denticola ATCC
33520]
Length = 616
Score = 258 bits (659), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 159/447 (35%), Positives = 241/447 (53%), Gaps = 27/447 (6%)
Query: 21 EIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLT 80
+I +Y +IIDLG+ +R + E + +DD+A+ ++TSGTTGNPKGV +T
Sbjct: 132 KIEFHTYADIIDLGKSARI----EGKFKPEEYAENVDTDDLASIIFTSGTTGNPKGVTMT 187
Query: 81 HKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN--LKD 138
H+N + Q+ L D + + G K +S+LP WH +ERAC Y I G + Y+ L
Sbjct: 188 HRNFMTQLLELPDRIILKPGQKAISVLPVWHSFERACEYVIIISGGTIAYSKPIGSVLLA 247
Query: 139 DLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFC 198
D+ + P SVP ++E +Y GI K + + I + KR G C
Sbjct: 248 DMVKINPTLFPSVPRIWEAVYDGIFKVMKKRGRPLYYLFLFFIEVGIKTMRLKRRVTGQC 307
Query: 199 --LTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIG-ISKAGVSGGG 255
R K ++A++ L C + PL+ + + L+Y+ I+ G +AGVSGGG
Sbjct: 308 PHFQRKTKVIYPILAVLPLL-----C--IAPLYYIGDILIYRAIRKKFGKCFRAGVSGGG 360
Query: 256 SLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETN 315
+LP ++D F+ AI + V GYG+TE++PVI+ R V G++G P+ E KI+D
Sbjct: 361 ALPPNVDEFFWAIRINVMEGYGITETAPVISVRPMPKPVFGTLGKPLACFESKIIDKNGK 420
Query: 316 EVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCG 375
E LP KG++ VRG V +GY+K+P T + +D+DGW +TGD+ +
Sbjct: 421 E-LPHNRKGLLLVRGDAVTKGYYKDPERTAEVIDKDGWFDTGDLAI----------KTVD 469
Query: 376 GVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 435
G L+L+GR K+TIVL GEN+EP+ +E S LI VV+GQDQR GA+IV KE +
Sbjct: 470 GELILKGRKKNTIVLRGGENIEPVPIEVKLQESPLISIAVVLGQDQRSLGALIVVHKENL 529
Query: 436 LMAAKRLSIVHADASELSKEKTISLLY 462
A + + +EL + + +Y
Sbjct: 530 QSWAANNGLRNVPVTELIHDSNVQKMY 556
>gi|449128811|ref|ZP_21765057.1| hypothetical protein HMPREF9733_02460 [Treponema denticola SP33]
gi|448941219|gb|EMB22123.1| hypothetical protein HMPREF9733_02460 [Treponema denticola SP33]
Length = 641
Score = 258 bits (659), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 156/445 (35%), Positives = 242/445 (54%), Gaps = 23/445 (5%)
Query: 21 EIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLT 80
+I +Y +IIDLG+ +R + E + +DD+A+ ++TSGTTGNPKGV ++
Sbjct: 157 KIEFHTYADIIDLGKSARI----EGKFKPEEYAENVDTDDLASIIFTSGTTGNPKGVTMS 212
Query: 81 HKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN--LKD 138
H+N + Q+ L D + + G K +S+LP WH +ERAC Y I G + Y+ L
Sbjct: 213 HRNFMTQLLELPDRIILKPGQKAISVLPVWHSFERACEYVIIISGGTIAYSKPIGSILLA 272
Query: 139 DLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFC 198
D+ + P SVP ++E +Y GI K + + + + KR G C
Sbjct: 273 DMLKINPTLFPSVPRIWEAVYDGIFKVMKKRGRPLYYLFLFFVDVGIKTMRLKRRVTGQC 332
Query: 199 LTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIG-ISKAGVSGGGSL 257
Q++ L ++ L ++C + P++ + + L+Y+ I+ G KAGVSGGG+L
Sbjct: 333 -PHFQRRTKVLYPILAVL--PLLC--IAPMYYIGDLLIYRTIRKKFGKCFKAGVSGGGAL 387
Query: 258 PMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEV 317
P ++D F+ A+ + V GYG+TE++PVI+ R V G++G P+ E KI+D NE
Sbjct: 388 PPNVDEFFWAVRINVMEGYGITETAPVISVRPMPRPVFGTLGKPLACFESKIIDKNGNE- 446
Query: 318 LPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGV 377
LP KG++ V+G V +GY+K P T + +D+DGW +TGD+ + G
Sbjct: 447 LPHNRKGLLLVKGDAVTKGYYKEPERTAEVIDKDGWFDTGDLAI----------KTIDGE 496
Query: 378 LVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLM 437
L+L+GR K+TIVL GEN+EP+ +E S LI VV+GQDQR GA+IV KE +
Sbjct: 497 LILKGRRKNTIVLRGGENIEPVPIEVKLQESPLISIAVVLGQDQRSLGALIVVHKENLQA 556
Query: 438 AAKRLSIVHADASELSKEKTISLLY 462
A + + SEL + + +Y
Sbjct: 557 WAANNGLRNVPVSELVHDSNVQKMY 581
>gi|398347129|ref|ZP_10531832.1| long-chain-fatty-acid CoA ligase [Leptospira broomii str. 5399]
Length = 679
Score = 258 bits (658), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 177/517 (34%), Positives = 272/517 (52%), Gaps = 74/517 (14%)
Query: 29 EIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI 88
++I+ G++ R S + R I +D+ T +YTSGTTG PKGV L H N++HQ+
Sbjct: 150 DLIEKGKQLRAGGSRKVEER----VAGIKPEDLFTLIYTSGTTGLPKGVQLMHSNMMHQV 205
Query: 89 RSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYM 148
++ ++ K LS+LP WHV+ER Y S G YT VR+L+ DL +P +M
Sbjct: 206 LNVTPMLKINAEAKLLSILPVWHVFERVVEYVCISIGAATYYTNVRDLRQDLATVKPTFM 265
Query: 149 ISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYT----AFKRIYEGFCLTRNQK 204
S P ++E +Y+GI +I + + R L ++++ ++ A R G + + +
Sbjct: 266 GSAPRLWENIYNGIYTRI-NDPSQTPTIRRTLFKLAYFFSDKNNASTRFLSGNEVDYHGR 324
Query: 205 QP--SY---LVALIDWLWA-----RIICAIL-------------WPLHLLA--------- 232
P S+ ++ +I +L II AI PL++++
Sbjct: 325 NPISSFFYGILMVIQYLLTGPFTLSIITAIAAYMLAPTSFGYLSLPLYVVSGLGLFLNSA 384
Query: 233 --EKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARR 289
+K+V KI++A G + +A +SGGG+LP H+D F+ IG+ V GYG+TE+SPV++ R
Sbjct: 385 TLDKVVLSKIRTATGGNLRASISGGGALPRHVDEFFNNIGINVLEGYGMTETSPVLSVRT 444
Query: 290 PTCNVLGSVGHPINHTEIKIVDAETNEVLPA------------GSKGIVKVRGSQVMQGY 337
++GSVG + T ++I + + N+VL G KG+V V+G QVM+GY
Sbjct: 445 FQKLIIGSVGSIVPKTRLQIRN-DNNDVLTEVDEGGHITQGKLGRKGVVFVKGPQVMKGY 503
Query: 338 FKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVE 397
FKN AT + L DGW+NTGD+G I + L L GRAKDT+VL GENVE
Sbjct: 504 FKNDEATAKTL-VDGWMNTGDMGMINFKRT----------LTLTGRAKDTVVLLGGENVE 552
Query: 398 PLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASEL-SKEK 456
P+ +E S I Q +VIGQDQ+ GAII+PD E++ AK I +D +L K
Sbjct: 553 PVPIENKLQESPYISQCMVIGQDQKNLGAIIIPDFEKLGEWAKENGIDISDREKLIENPK 612
Query: 457 TISLLYGELRKWTS-----KCSFQIGPIHVVDEPFTV 488
+ E++ + K Q+ P ++ +PF V
Sbjct: 613 IVDFYRKEIKNLNNAKNGFKSFEQVTPFFLITKPFEV 649
>gi|449131475|ref|ZP_21767689.1| hypothetical protein HMPREF9724_02354 [Treponema denticola SP37]
gi|448939175|gb|EMB20093.1| hypothetical protein HMPREF9724_02354 [Treponema denticola SP37]
Length = 616
Score = 257 bits (657), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 158/447 (35%), Positives = 241/447 (53%), Gaps = 27/447 (6%)
Query: 21 EIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLT 80
+I +Y +IIDLG+ +R + E + +DD+A+ ++TSGTTGNPKGV +T
Sbjct: 132 KIEFHTYADIIDLGKSARI----EGKFKPEEYAENVDTDDLASIIFTSGTTGNPKGVTMT 187
Query: 81 HKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN--LKD 138
H+N + Q+ L D + + G K +S+LP WH +ERAC Y I G + Y+ L
Sbjct: 188 HRNFMTQLMELPDRIILKPGQKAISVLPVWHSFERACEYVIIISGGTIAYSKPIGSVLLA 247
Query: 139 DLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFC 198
D+ + P SVP ++E +Y GI K + + I + KR G C
Sbjct: 248 DMVKINPTLFPSVPRIWEAVYDGIFKAMKKRGRPLYYLFLFFIEVGIKTMRLKRRVTGQC 307
Query: 199 --LTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIG-ISKAGVSGGG 255
R K ++A++ L C + PL+ + + L+Y+ I+ G +AGVSGGG
Sbjct: 308 PHFQRKTKVIYPILAVLPLL-----C--IAPLYYIGDILIYRAIRKKFGKCFRAGVSGGG 360
Query: 256 SLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETN 315
+LP ++D F+ AI + V GYG+TE++PVI+ R V G++G P+ E KI++
Sbjct: 361 ALPPNVDEFFWAIRINVMEGYGITETAPVISVRPMPKPVFGTLGKPLACFESKIINKNGK 420
Query: 316 EVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCG 375
E LP KG++ VRG V +GY+K+P T + +D+DGW +TGD+ +
Sbjct: 421 E-LPHNRKGLLLVRGDAVTKGYYKDPERTAEVIDKDGWFDTGDLAI----------KTVD 469
Query: 376 GVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 435
G L+L+GR K+TIVL GEN+EP+ +E S LI VV+GQDQR GA+IV KE +
Sbjct: 470 GELILKGRKKNTIVLRGGENIEPVPIEVKLQESPLISLAVVLGQDQRSLGALIVVHKENL 529
Query: 436 LMAAKRLSIVHADASELSKEKTISLLY 462
A + + +EL + + +Y
Sbjct: 530 QSWAANNGLRNVPVTELIHDSNVQKMY 556
>gi|336324216|ref|YP_004604183.1| long-chain-fatty-acid--CoA ligase [Flexistipes sinusarabici DSM
4947]
gi|336107797|gb|AEI15615.1| Long-chain-fatty-acid--CoA ligase [Flexistipes sinusarabici DSM
4947]
Length = 633
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 153/480 (31%), Positives = 256/480 (53%), Gaps = 40/480 (8%)
Query: 24 VFSYDEIIDLGRE----SRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVML 79
+++Y+EII RE + F D K DD T +YTSGTTG PKGV+L
Sbjct: 151 IYAYNEIIKKDREITYNEIEEFISLADKHK--------IDDPFTLIYTSGTTGTPKGVLL 202
Query: 80 THKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDD 139
+++N L + + D+V + D +LS+LP WH++ER + +G +Y+ ++ DD
Sbjct: 203 SNRNFLANLSRIPDMVDLSSDDVWLSILPSWHIFERLAEHLSVMQGCTTVYSNIKTFSDD 262
Query: 140 LQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYE---- 195
L++Y P + +VP ++E LY+ + + S + + L+ S AY KR+ +
Sbjct: 263 LKKYSPTIVATVPRLWEALYTKVNATLKKESEKKAKIFNLLVNASAAYRRNKRLLKNNLP 322
Query: 196 GFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGG 255
GF K+ + + A + +L P+ + A K + G + VSGGG
Sbjct: 323 GF------KKKGFFENIFSKGLALVKMILLKPVEMYAGKKFVLLREKFGGRLRLAVSGGG 376
Query: 256 SLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETN 315
SLP +D + +AIG+++ YG+TE +P IA R C V G++G PI +TEI+IVD + N
Sbjct: 377 SLPQFVDEWIDAIGIRIVTAYGMTECAPGIAGRDLHCEVFGTLGPPIKNTEIRIVDEDGN 436
Query: 316 EVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCG 375
+LPAG +G ++V+G QV GY+KN +++ EDG+ TGD+G
Sbjct: 437 -ILPAGEEGEIQVKGEQVFSGYYKNEEENEKSFTEDGFFKTGDLGKFT----------LT 485
Query: 376 GVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 435
G LV+ GRAK+ IVL+ GEN++P ++E ++ V++GQD++ GA+IVPD E++
Sbjct: 486 GELVITGRAKEIIVLANGENIDPTKIESTISMFPFVKDAVLVGQDKKGLGALIVPDFEQM 545
Query: 436 --LMAAKRLSIVHADASELSKEKTISLLYGELRKW-TSKCSF----QIGPIHVVDEPFTV 488
++ K ++H+ + + ++ K+ +SK F ++ I +D+ F +
Sbjct: 546 KDYVSEKYNKLIHSKEDFTKDSYIVEKIRKDINKFLSSKKGFRDYEKLHKISFLDKEFKL 605
>gi|333996558|ref|YP_004529170.1| AMP-binding domain-containing protein [Treponema primitia ZAS-2]
gi|333740669|gb|AEF86159.1| AMP-binding enzyme family protein [Treponema primitia ZAS-2]
Length = 637
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 154/438 (35%), Positives = 244/438 (55%), Gaps = 23/438 (5%)
Query: 27 YDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLH 86
Y+E++ +G + + DA + +D+AT ++TSGTTG PKGVMLTH+N L
Sbjct: 157 YEELLKMGEKRHSQNPEEIDAEMNKGQ----GEDLATIIFTSGTTGIPKGVMLTHRNFLV 212
Query: 87 QIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN--LKDDLQRYQ 144
Q S + + GD +LS+LP WHV+ER+ Y IF G + Y+ + L D Q +
Sbjct: 213 QQPSFRLVFETKTGDIWLSVLPVWHVFERSIEYVIFYLGNGIAYSKPISSVLLPDFQNIR 272
Query: 145 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQK 204
P +M+SVP V+E++ + + + + + Y F+ + G L
Sbjct: 273 PQWMVSVPRVWESIMDWTNRNVKQQGWFWKNWFNFFVNLGIMYNYFRDLTFGL-LPNFHG 331
Query: 205 QPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDL 263
+ L A+I + ++C P LA LV+++++ +G +AG+SGGGSLP+ +DL
Sbjct: 332 RIRVLDAIIGFFPWVLLC----PARGLAWLLVFRRVKKRLGGRFRAGISGGGSLPVKVDL 387
Query: 264 FYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSK 323
F+ A+G+++Q GYGLTE+SP++A RR +VG + TE +IVD + +L G+
Sbjct: 388 FFNAVGLRLQEGYGLTETSPIVAVRRYKAARRNTVGQVLLDTECRIVDNK-GAILQPGNN 446
Query: 324 GIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGR 383
G ++VRG QVM+GY++ P T + L +DGW+ TGDI + + + + GR
Sbjct: 447 GHLQVRGGQVMKGYYRKPEETAKVLFDDGWIETGDIAMMTYDNE----------VRITGR 496
Query: 384 AKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLS 443
AKDTIVL GENVEP+ +E S + Q +V+GQDQ+ A+IVP +E ++ A+ +
Sbjct: 497 AKDTIVLRGGENVEPIPIELKIQESPWVAQCMVVGQDQKYLAALIVPVQEAIMGFAEENN 556
Query: 444 IVHADASELSKEKTISLL 461
I D L ++ I+ L
Sbjct: 557 IPIVDYDLLLQQPEINEL 574
>gi|386859826|ref|YP_006272532.1| Long-chain-fatty-acid CoA ligase [Borrelia crocidurae str. Achema]
gi|384934707|gb|AFI31380.1| Long-chain-fatty-acid CoA ligase [Borrelia crocidurae str. Achema]
Length = 643
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 158/467 (33%), Positives = 250/467 (53%), Gaps = 35/467 (7%)
Query: 17 DIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKG 76
D + I + SY +++ LG K + D + E + D+AT +YTSGTTG PKG
Sbjct: 145 DKLGNITIISYRQLLSLGHNYLKDYPKMFDL----ELEKVSGKDVATIIYTSGTTGFPKG 200
Query: 77 VMLTHKNLLHQIRSLYDIVPA-ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN 135
V+L H++ + Q+ + D +P+ E G +S+LP WH +ER C Y + G+ + Y+
Sbjct: 201 VVLRHESFIFQLDRINDYLPSLEPGQIMISILPLWHSFERTCEYIVALNGLSIAYSKPVG 260
Query: 136 --LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRI 193
L D PH +ISVP ++E + +GI K++ + S ++++ +++ Y
Sbjct: 261 PILLKDFAALNPHAIISVPRIWEGIRAGIIKKV-SESFLKKILFNFFLKVGIFYVKLMEK 319
Query: 194 YEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKA-GVS 252
+ G L ++ ++L++ + I +++P L LV+KKI+ A+G G+S
Sbjct: 320 FLG--LVPLYRKSNFLISFFVKIIYLIGLILVFPFKFLGHILVFKKIKKALGKRFIFGIS 377
Query: 253 GGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDA 312
GGG+L ++D F++A+G+ V GYGLTE+ PV++ RR V +VG E K+VD
Sbjct: 378 GGGALVDYVDYFFKAVGIVVLEGYGLTETGPVLSVRRLKSPVANTVGPLFPDIEYKVVDH 437
Query: 313 ETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSR 372
N VLP G KG + V+ QVM GYFK+ + T++ L DGW TGD+
Sbjct: 438 NGN-VLPPGEKGELWVKSPQVMSGYFKDETMTREVLTRDGWFKTGDL------------- 483
Query: 373 RCGGV---LVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIV 429
C + + + GR+KDTIVL GEN+EP +E A +S I +VV+GQDQ+ GAIIV
Sbjct: 484 VCATINDEISIVGRSKDTIVLRGGENIEPEPIERALSKSVFIENVVVVGQDQKFLGAIIV 543
Query: 430 PDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSKCSFQI 476
P+ E + A I + +L + ++ K+ SKC I
Sbjct: 544 PNFEVLEKWAISSGIAFSSHDDLLSNELVN-------KFYSKCILDI 583
>gi|258404180|ref|YP_003196922.1| AMP-dependent synthetase and ligase [Desulfohalobium retbaense DSM
5692]
gi|257796407|gb|ACV67344.1| AMP-dependent synthetase and ligase [Desulfohalobium retbaense DSM
5692]
Length = 630
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 140/404 (34%), Positives = 234/404 (57%), Gaps = 14/404 (3%)
Query: 56 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYER 115
+G DD+ T +YTSGTTG PKGV LTH N++H +++L D++ + D++LS+LP WH++ER
Sbjct: 176 VGGDDLVTIIYTSGTTGTPKGVKLTHANIMHNVQNLPDLIRLTSEDRWLSILPTWHIFER 235
Query: 116 ACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 175
Y SRG ++Y+++R DL+R++P + +VP ++E+LY + + S +
Sbjct: 236 TVEYVALSRGSCIVYSSIRTFAADLERFKPTLVATVPRIWESLYGKVNAALKKESPRKAR 295
Query: 176 VARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKL 235
+ + L+ +S ++ R G L R + +P + V L A L PL+ +A
Sbjct: 296 LFQFLVSVSSSFRLNSRRISG-RLPRFEHEPWWRV-LPRKARALACVVALAPLYAVARAK 353
Query: 236 VYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVL 295
+ + G + +SGGGSLP +D + +AIG+++ YG+TE SP IA R C
Sbjct: 354 LAPVKKKFGGRLRLAISGGGSLPPFLDEWIDAIGIRITNAYGMTECSPGIAGRGLDCRTF 413
Query: 296 GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLN 355
G++G P +TE++I + EV P G++G ++VRG QV GY+ N A ++ DG+
Sbjct: 414 GTLGPPFPYTEVRIAGQDDIEV-PTGTEGEIQVRGPQVFHGYYHNNEANAESFTPDGFFR 472
Query: 356 TGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIV 415
TGD+G + G LV+ GRAK+ IVL++GEN++P +E ++ V
Sbjct: 473 TGDLG----------KKTLNGELVITGRAKEIIVLASGENIDPTNIEATISTFPFVQDAV 522
Query: 416 VIGQDQRRPGAIIVPDKEEVLM-AAKRLSIVHADASELSKEKTI 458
++GQD++ GA+IVPD E++ A++ + V +A ++ ++K I
Sbjct: 523 LVGQDKKGLGALIVPDLEKLRQYVAEQYNHVVNEAGDVLQDKQI 566
>gi|398336768|ref|ZP_10521473.1| long-chain-fatty-acid CoA ligase [Leptospira kmetyi serovar
Malaysia str. Bejo-Iso9]
Length = 681
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 178/522 (34%), Positives = 269/522 (51%), Gaps = 74/522 (14%)
Query: 24 VFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKN 83
V ++I+ G+ R S + R I +D+ T +YTSGTTG PKGVML H N
Sbjct: 145 VLKMQDLIEKGKSLRAGGSKKAEER----IAAIQPEDLFTLIYTSGTTGLPKGVMLKHSN 200
Query: 84 LLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRY 143
++HQ+ ++ ++ + + LS+LP WHV+ER Y G YT VR+L+ DL
Sbjct: 201 MMHQVNNVSPMLKIKADARLLSILPIWHVFERVVEYVCIGLGAATYYTNVRDLRQDLATV 260
Query: 144 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFK----RIYEGF-- 197
+P +M S P ++E +Y+GI +I A + R L ++++ +++ K R +G
Sbjct: 261 KPTFMGSAPRLWENIYNGIYTRI-NDPAQTPALRRGLFKLAYFFSSKKNQAVRFLKGIEV 319
Query: 198 -CLTRNQ----------------KQPSYLVALIDWLWA-------RIICAILWPLHLLA- 232
+ RN P L L L A + + L+ + LA
Sbjct: 320 DYIGRNPIGSLFYGILMFVQLLLTGPFTLTVLAGALGAYFAGTELHFLTSPLYTISGLAV 379
Query: 233 -------EKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPV 284
+++V KI++A G KA +SGGG+LP H+D F+ IG+ V GYG+TE+SPV
Sbjct: 380 LLNSFTLDRIVLAKIRAATGGQLKASISGGGALPRHVDEFFGNIGINVLEGYGMTETSPV 439
Query: 285 IAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA------------GSKGIVKVRGSQ 332
I+ R ++GSVG + T ++I + + N VL G KG+V ++G Q
Sbjct: 440 ISVRTFEKLIIGSVGVIVPKTRLQIRN-DNNGVLTEIDETGNITQGKLGLKGVVFIKGPQ 498
Query: 333 VMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLST 392
VM+GYFKN AT +A+ DGW+NTGD+G I + L L GRAKDT+VL
Sbjct: 499 VMKGYFKNEEATSKAIS-DGWMNTGDMGMINFKKT----------LTLTGRAKDTVVLLG 547
Query: 393 GENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASEL 452
GENVEP+ +E S+ I Q +VIGQDQ+ GAI+VPD E++ AK + +L
Sbjct: 548 GENVEPVPIENKLQESAYISQCMVIGQDQKNLGAIVVPDFEKLQEWAKENGVNETSNEKL 607
Query: 453 SKEKTISLLY-GELRKW-TSKCSF----QIGPIHVVDEPFTV 488
+ + LY E++ +K F Q+ P ++ +PF V
Sbjct: 608 IENPKVYDLYRKEIKALNNTKNGFKSFEQVTPFILIAKPFEV 649
>gi|386347279|ref|YP_006045528.1| AMP-dependent synthetase and ligase [Spirochaeta thermophila DSM
6578]
gi|339412246|gb|AEJ61811.1| AMP-dependent synthetase and ligase [Spirochaeta thermophila DSM
6578]
Length = 630
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 155/417 (37%), Positives = 233/417 (55%), Gaps = 23/417 (5%)
Query: 22 IPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTH 81
I V S+ +++ G ++ D E + ++ +AT ++TSGTTG PKGVML+H
Sbjct: 149 ITVLSFSALMERGTQALPGMRDHILT----AVEELPAEALATVIFTSGTTGLPKGVMLSH 204
Query: 82 KNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAV--RNLKDD 139
N LHQ++ + ++ GD +LS+LP WH +ER Y S + Y+ R + D
Sbjct: 205 GNFLHQVKGVPILLKVGPGDIWLSVLPVWHSFERMMQYVALSSASAIAYSKPIGRIMLQD 264
Query: 140 LQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCL 199
+ +P +M SVP ++E + GI + I S + + +A + + AY F + +G L
Sbjct: 265 MATLKPTWMASVPRIWEGIRKGILQTIKKESPLVQAIFQASLVVGRAYAFFTHMVKG-EL 323
Query: 200 TRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLP 258
R + +P ++D + I +LWP LA LV++K+ +G AG+SGGG+LP
Sbjct: 324 PRFKWRPR----ILDRVIGIIPFLLLWPFKQLAHLLVFRKLHRKLGGRFVAGISGGGALP 379
Query: 259 MHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVL 318
+D F++AI + V GYGLTE++PV+A R V +VG TEI+I D E N VL
Sbjct: 380 PEVDGFFDAIRITVLEGYGLTEAAPVLAVRSYYHPVPHTVGPVFPDTEIQIRDEEGN-VL 438
Query: 319 PAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVL 378
P G +G + RG QVM GY K P T++ LDE+GWLNTGD+G + + L
Sbjct: 439 PPGRQGTIFARGGQVMLGYLKAPEETRKVLDEEGWLNTGDLGMLTWDNE----------L 488
Query: 379 VLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 435
+ GRAKDTIVL GENVEP LE+A L+ +V+GQD++ G +I D++ +
Sbjct: 489 AITGRAKDTIVLRGGENVEPAPLEQALKEHPLVAHAMVVGQDEKYLGVLIFVDQDSL 545
>gi|268680079|ref|YP_003304510.1| AMP-dependent synthetase and ligase [Sulfurospirillum deleyianum
DSM 6946]
gi|268618110|gb|ACZ12475.1| AMP-dependent synthetase and ligase [Sulfurospirillum deleyianum
DSM 6946]
Length = 629
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 143/412 (34%), Positives = 236/412 (57%), Gaps = 18/412 (4%)
Query: 24 VFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKN 83
++SY +I+ + R +D +A K K E + ++DI T +YTSGTTG PKGV L+H+N
Sbjct: 148 LYSYQDIL----KDRTIHTDELEAFKRRK-EALHTEDIVTIIYTSGTTGTPKGVPLSHQN 202
Query: 84 LLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRY 143
+++ +R + ++ E+ D ++S+LP WH++ERA Y S G +Y+ ++ DL+ Y
Sbjct: 203 IMYNVREIPPLIALESADVWVSILPSWHIFERAAEYVALSGGCCTVYSTIKTFAADLEHY 262
Query: 144 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQ 203
+P + +VP ++E++Y+ I + + + + + LI IS AY +RI + L Q
Sbjct: 263 KPTIVATVPRLWESMYTKINTTLEKTDPKKAKIFKKLIAISVAYKRAERILKD-ELPCFQ 321
Query: 204 KQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDL 263
K+ ++L D A + L+P H A+K + + G + VSGGG+LP +D
Sbjct: 322 KRSAFLTCK-DKSIAFVSRFALYPFHAFAQKKLSLVQEKFGGRLRLAVSGGGALPDFLDA 380
Query: 264 FYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSK 323
+ +AIG+++ YG++E +PVIA R CN ++G P+ T +KIV E L AG
Sbjct: 381 WIDAIGIRIVNAYGMSECAPVIAGRALQCNTFSTLGLPVQGTMLKIVSKE-GVALEAGEI 439
Query: 324 GIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGR 383
G + V+G QVMQGY+KNP ++ E+G+ TGD+G + G LV+ GR
Sbjct: 440 GEIWVKGEQVMQGYYKNPQENTKSFSEEGFFKTGDLGKVT----------LNGELVITGR 489
Query: 384 AKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 435
+K+ IVL+ GENV+P +E I+ +++G ++ GA+IVPD E++
Sbjct: 490 SKEIIVLANGENVDPSRIESTLSMLPFIQDAILVGHSKKGLGALIVPDFEKL 541
>gi|398348984|ref|ZP_10533687.1| long-chain-fatty-acid CoA ligase [Leptospira broomii str. 5399]
Length = 685
Score = 255 bits (652), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 178/498 (35%), Positives = 258/498 (51%), Gaps = 71/498 (14%)
Query: 29 EIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI 88
++I+ GRE R + R E I DD+ T +YTSGTTG PKGVML H N++HQ+
Sbjct: 152 DLIEKGRELRAHGGKKTEKR----IEAIKPDDLFTLIYTSGTTGMPKGVMLMHSNMIHQM 207
Query: 89 RSLYDIVPAE----NGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQ 144
+ ++ + + D LS+LP WH++ER Y S GI YT V +L++DL + +
Sbjct: 208 EHVVPLILKKSMIKDDDSMLSILPVWHIFERVVEYSAISLGIATFYTKVSDLRNDLAKAK 267
Query: 145 PHYMISVPLVYETLYSGIQKQIF---TSSAARRVVARALIRISFAYTAFKRI-------Y 194
P +M S P V+E++Y+GI +I + R+ + S Y A R Y
Sbjct: 268 PSFMASAPRVWESIYTGIYNRINDPKQTPPVRKFLFNTAYLFSKNYHAAIRFLSGREVDY 327
Query: 195 EG------FCL-----TRNQKQPSYLVALI---DWLWAR-------IICAILWPLHLLA- 232
EG F L R + V+LI + + + +I +L + +L
Sbjct: 328 EGRNIIQSFILGIRAVIRLVLTGPFTVSLIAGASYFYVKTAHPNLPLIPGLLLTVAILGL 387
Query: 233 -------EKLVYKKIQSAIGISKAG-VSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPV 284
+ +V KI+ A G G +SGGG+L H+D F+ IG+ V GYG+TE++PV
Sbjct: 388 IFNYKTLDAIVLSKIRQATGGRLRGTLSGGGALQRHVDNFFNDIGLLVLEGYGMTETAPV 447
Query: 285 IAARRPTCNVLGSVGHPINHTEIKIVD---------AETNEVLPA--GSKGIVKVRGSQV 333
I+ R ++GSVG+ + TE++I D + EVL G KGIV ++G QV
Sbjct: 448 ISVRHYDYPIIGSVGYIVPKTELQIRDDSGKVLTHINDNKEVLAGRIGLKGIVHIKGPQV 507
Query: 334 MQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTG 393
M+GY+KNP ATK+ + DGW+NTGDIG+I L L GRAKDT+VL G
Sbjct: 508 MKGYYKNPEATKKTI-SDGWINTGDIGFI----------NFKKTLTLTGRAKDTVVLLGG 556
Query: 394 ENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASEL- 452
ENVEP+ +E S I+Q +V GQDQ+ GAIIVPD E + + I D +L
Sbjct: 557 ENVEPVPIENKMDESPYIKQSMVFGQDQKVLGAIIVPDFENLKPWLEENGISAHDIKDLI 616
Query: 453 SKEKTISLLYGELRKWTS 470
K + E+R++ S
Sbjct: 617 DHPKVLEFYKREVREYNS 634
>gi|203288031|ref|YP_002223046.1| long-chain-fatty-acid CoA ligase [Borrelia recurrentis A1]
gi|201085251|gb|ACH94825.1| long-chain-fatty-acid CoA ligase [Borrelia recurrentis A1]
Length = 643
Score = 255 bits (652), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 159/467 (34%), Positives = 251/467 (53%), Gaps = 35/467 (7%)
Query: 17 DIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKG 76
D + I + SY +++ LG + K + D + E + D+AT +YTSGTTG PKG
Sbjct: 145 DKLGNITIISYRQLLSLGHDYLKDYPKMFDL----ELEKVSGKDVATIIYTSGTTGFPKG 200
Query: 77 VMLTHKNLLHQIRSLYDIVPA-ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN 135
V+L H++ + Q+ + D +P+ E G +S+LP WH +ER C Y + G+ + Y+
Sbjct: 201 VVLRHESFIFQLDRINDYLPSLEPGQIMISILPLWHSFERTCEYIVALNGLSIAYSKPVG 260
Query: 136 --LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRI 193
L D PH +ISVP ++E + +GI K++ + S ++++ + + Y F
Sbjct: 261 PILLKDFAALNPHAIISVPRIWEGIRAGIIKKV-SESFLKKILFNFFLNVGIFYVKFMEK 319
Query: 194 YEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKA-GVS 252
+ G L ++ ++L++ + I +++P L LV+KKI+ A+G G+S
Sbjct: 320 FLG--LVPIYRKSNFLISFFMKIIYLIGLILIFPFKFLGHILVFKKIKKALGKRFIFGIS 377
Query: 253 GGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDA 312
GGG+L ++D F++A+G+ V GYGLTE+ PV++ RR V +VG E K+VD
Sbjct: 378 GGGALVDYVDYFFKAVGIVVLEGYGLTETGPVLSVRRLKSPVANTVGPLFPDIEYKVVDH 437
Query: 313 ETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSR 372
N VLP G KG + V+ QVM GYFK+ + T++ L DGW TGD+
Sbjct: 438 NGN-VLPPGEKGELWVKSPQVMSGYFKDETMTREVLTRDGWFKTGDL------------- 483
Query: 373 RCGGV---LVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIV 429
C + + + GR+KDTIVL GEN+EP +E A +S I +VV+GQDQ+ GAIIV
Sbjct: 484 VCATINDEISIVGRSKDTIVLRGGENIEPEPIERALSKSVFIENVVVVGQDQKFLGAIIV 543
Query: 430 PDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSKCSFQI 476
P+ E + A I + +L + ++ K+ SKC I
Sbjct: 544 PNFEVLEKWAISSGIAFSSHDDLLSNELVN-------KFYSKCILDI 583
>gi|398343962|ref|ZP_10528665.1| long-chain-fatty-acid CoA ligase [Leptospira inadai serovar Lyme
str. 10]
Length = 685
Score = 255 bits (651), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 182/521 (34%), Positives = 268/521 (51%), Gaps = 76/521 (14%)
Query: 29 EIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI 88
++I+ GRE R + R E I DD+ T +YTSGTTG PKGVML H N++HQ+
Sbjct: 152 DLIEKGRELRAHGGKKAEKR----IEAIKPDDLFTLIYTSGTTGMPKGVMLMHSNMIHQM 207
Query: 89 RSLYDIVPAE----NGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQ 144
+ ++ + + D LS+LP WH++ER Y S GI YT V +L++DL + +
Sbjct: 208 EHVVPLILKKSMIKDDDSMLSILPVWHIFERVVEYSAISLGIATFYTKVSDLRNDLAKAK 267
Query: 145 PHYMISVPLVYETLYSGIQKQIF---TSSAARRVVARALIRISFAYTAFKRI-------Y 194
P +M S P V+E++Y+GI +I + R+ + S Y A R Y
Sbjct: 268 PSFMASAPRVWESIYTGIYNRINDPKQTPPVRKFLFNTAYLFSKNYHAAIRFLSGREVDY 327
Query: 195 EG------FCL-----TRNQKQPSYLVALI---DWLWAR-------IICAILWPLHLLA- 232
EG F L R + V+LI + + + +I +L + +L
Sbjct: 328 EGRNIIQSFVLGVQAVIRLVLTGPFTVSLIAGASYFYIKTAHPNLPLIPGLLLAVAILGL 387
Query: 233 -------EKLVYKKIQSAIGISKAG-VSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPV 284
+ +V KI+ A G G +SGGG+L H+D F+ IG+ V GYG+TE++PV
Sbjct: 388 IFNYKTLDAIVLSKIRQATGGRLRGTLSGGGALQRHVDNFFNDIGLLVLEGYGMTETAPV 447
Query: 285 IAARRPTCNVLGSVGHPINHTEIKIVD---------AETNEVLPA--GSKGIVKVRGSQV 333
I+ R ++GSVG+ + TE++I D + EVL G KG+V ++G QV
Sbjct: 448 ISVRHFDYPIIGSVGYVVPKTELQIRDDSGKVLTHINDNKEVLAGRIGLKGVVHIKGPQV 507
Query: 334 MQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTG 393
M+GY+KNP ATK+ + DGW+NTGDIG+I L L GRAKDT+VL G
Sbjct: 508 MKGYYKNPEATKKTI-SDGWINTGDIGFI----------NFKKTLTLTGRAKDTVVLLGG 556
Query: 394 ENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASEL- 452
ENVEP+ +E S I+Q +V GQDQ+ GAIIVPD E + + I D +L
Sbjct: 557 ENVEPVPIENKMDESPYIKQSMVFGQDQKVLGAIIVPDFENLKPWLEENGISARDIKDLI 616
Query: 453 SKEKTISLLYGELRKWTSK----CSFQ-IGPIHVVDEPFTV 488
K + E+R++ S SF+ + I + +PF +
Sbjct: 617 DHPKVLEFYKKEVREYNSTKEGFKSFELVQHIVIASKPFEI 657
>gi|408792234|ref|ZP_11203844.1| AMP-binding enzyme [Leptospira meyeri serovar Hardjo str. Went 5]
gi|408463644|gb|EKJ87369.1| AMP-binding enzyme [Leptospira meyeri serovar Hardjo str. Went 5]
Length = 682
Score = 255 bits (651), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 171/520 (32%), Positives = 270/520 (51%), Gaps = 70/520 (13%)
Query: 24 VFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKN 83
+ + ++++ GR+ R + R I DD+ T +YTSGTTG PKGVML H N
Sbjct: 148 ILHFYDLLEQGRDMRAKGKREAEKR----MAGIKPDDLYTLIYTSGTTGMPKGVMLMHSN 203
Query: 84 LLHQIRSLYD-IVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQR 142
++HQ+ + + D+ LS+LP WH++ER YF G YT V L++D+Q+
Sbjct: 204 MIHQMHYVVPRVAKVSPDDRMLSILPVWHIFERVVEYFAIINGGSTYYTKVTELRNDIQK 263
Query: 143 YQPHYMISVPLVYETLYSGIQKQIF---TSSAARRVVARALIRISFAYTAFKRI------ 193
+P +M S P V+E++Y+GI +I + RR + + S Y A R
Sbjct: 264 ARPTFMASAPRVWESIYNGIYTRINDPKQTPPVRRFLFKVAYFFSKHYHAAVRFLKGWEV 323
Query: 194 -YEG-----------FCLTRNQKQPSYLVALIDWLWARII----CAILWPLHLLA----- 232
YEG F + + + V+++ L + + + PL+++A
Sbjct: 324 DYEGRNIIQSLGLSLFSIIKLLLTGPFTVSILSILAVQFVLPEESSFKTPLYVVAGLGVL 383
Query: 233 ------EKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVI 285
+++V KI+ A G +A +SGGG+L H+D F+ IG+ V GYG+TE+ PVI
Sbjct: 384 FNSFTLDRIVLAKIRQATGGHLRATLSGGGALQKHVDAFFMDIGITVLEGYGMTETGPVI 443
Query: 286 AARRPTCNVLGSVGHPINHTEIKI----------VDAETNEVL-PAGSKGIVKVRGSQVM 334
+AR ++GSVG + ++++I +D + N + G KG+V ++G QVM
Sbjct: 444 SARTFDRPIMGSVGDIVPLSQVQIRDDAGNVLCHIDDKKNIIFGKLGVKGVVHIKGPQVM 503
Query: 335 QGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGE 394
+GY+KNP TK+ + D W+NTGDIG I L L GRAKDTIVL GE
Sbjct: 504 KGYYKNPETTKKTI-VDNWMNTGDIGMI----------NFKKTLTLTGRAKDTIVLLGGE 552
Query: 395 NVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASEL-S 453
NVEP+ +E S+ I+Q +++GQDQ+ GAIIVPD + ++ A+ I + +L +
Sbjct: 553 NVEPVPIENKIDESTYIKQSMIVGQDQKVLGAIIVPDFDALIPWAEENGISEKNPEKLIT 612
Query: 454 KEKTISLLYGELRKWTS-KCSF----QIGPIHVVDEPFTV 488
K + E+R + S K F Q+ + ++ +PF V
Sbjct: 613 NPKVVDFYKKEVRNFNSVKTGFKNFEQVQYVTLITKPFEV 652
>gi|398346500|ref|ZP_10531203.1| long-chain-fatty-acid--CoA ligase [Leptospira broomii str. 5399]
Length = 685
Score = 254 bits (650), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 176/519 (33%), Positives = 265/519 (51%), Gaps = 76/519 (14%)
Query: 29 EIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI 88
E++ GR+ R+ S + + R ++ SDD+ T +YTSGTTG PKGV LTH N++ Q+
Sbjct: 149 ELLSKGRKLREQGSRNVEER----VLSLKSDDLFTIIYTSGTTGQPKGVQLTHSNMIFQV 204
Query: 89 RSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYM 148
RS+ I+ D+ +S+LP WH++ER Y G Y+ V++LK +L ++P +
Sbjct: 205 RSVSPILEITEKDRAISILPIWHIFERFLEYCFLHVGGTTYYSNVQDLKQNLTDFKPTFF 264
Query: 149 ISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRN---QKQ 205
+ P V+E + +GI ++ R+ R L ++++ Y+ K + F L + +
Sbjct: 265 GAAPRVWEMICNGILARMTDPDRTSRL-GRILFKLAYTYSEKKNEAKAFFLGNELDLKGR 323
Query: 206 PSYLVAL------IDWLW--------ARIICAILWPLHLLAE------------------ 233
S+ L ++L+ +CA L P AE
Sbjct: 324 SSFATFLKGLRMAFEYLFFGPFTLSAISFLCAALIPFGYAAEEIKILLYTIGVIGLLFNS 383
Query: 234 ----KLVYKKIQSAI--GISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAA 287
+LV KI+ I G K VSGGG+LP +D +G+++ GYG+TE+SPVI+
Sbjct: 384 FMLDQLVLSKIRKDIVGGFLKTSVSGGGALPNRVDRTLNHLGIRLLEGYGMTETSPVISI 443
Query: 288 RRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA------------GSKGIVKVRGSQVMQ 335
RR V+GSVGH + T ++I E NEVL G KG+V G +M+
Sbjct: 444 RRTDKFVIGSVGHILPKTRLQI-RTEKNEVLSEIDENGKFTKGKPGQKGVVFASGPHIMK 502
Query: 336 GYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGEN 395
GY+KNP T AL+ GW+NTGDIG ++ + + L L GRAK+TIVL GEN
Sbjct: 503 GYYKNPDITADALNA-GWMNTGDIGIVSYNRT----------LTLAGRAKETIVLRGGEN 551
Query: 396 VEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI-VHADASELSK 454
VEP+ +E S I Q +VIGQDQ+ GAIIVPD E ++ AK I V + L +
Sbjct: 552 VEPVPIEAKLQVSKYISQCMVIGQDQKNLGAIIVPDFESLIGWAKENYIPVDSIQELLQR 611
Query: 455 EKTISLLYGELRKWTS-----KCSFQIGPIHVVDEPFTV 488
+ I L E++ + K Q+ P ++ +PF V
Sbjct: 612 RQVIDLYRSEIKALNNARSGFKSFEQVTPFLLIVKPFEV 650
>gi|408792933|ref|ZP_11204543.1| AMP-binding enzyme [Leptospira meyeri serovar Hardjo str. Went 5]
gi|408464343|gb|EKJ88068.1| AMP-binding enzyme [Leptospira meyeri serovar Hardjo str. Went 5]
Length = 632
Score = 254 bits (650), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 159/424 (37%), Positives = 240/424 (56%), Gaps = 36/424 (8%)
Query: 21 EIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLT 80
+I + + E++ G+E RK DS D + TI D+ T +YTSGTTG PKGVMLT
Sbjct: 148 KIRISTLQELVAKGKELRKV--DSTDTV--FLNNTIKESDLFTMIYTSGTTGTPKGVMLT 203
Query: 81 HKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDL 140
N+L Q+++L + + GD+ LS+LP WH++ER F G Y++VR LK+DL
Sbjct: 204 QGNILFQLQNL--PIRLQKGDRTLSILPIWHIFERIFEIFSLYYGACTYYSSVRTLKEDL 261
Query: 141 QRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLT 200
+ +PH+M S P ++E++YSGI + SS ++ + + + + + +++ G L
Sbjct: 262 RFVKPHFMASAPRLWESIYSGILGTLAKSSPVKQKMFQLAMFFAKRFFISRQVITGNVLD 321
Query: 201 RNQ----KQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGG 255
+ KQ + + L+ + +I P HL+ + LV KI+ A G + SGGG
Sbjct: 322 IHPVVFWKQS---IRFVYHLYRFFLVSI--P-HLVFDFLVLSKIRKATGGELRGSCSGGG 375
Query: 256 SLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETN 315
+LP H+D F+ IG+ V GYG+TE++PV+A R + GSVG T++++VD T
Sbjct: 376 ALPYHVDEFFNTIGIPVLEGYGMTETAPVLAMRTFEEIIPGSVGKIFPKTKLRLVDLHTG 435
Query: 316 EV--------LPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHS 367
EV G KG + V+G QVM GY+KNP AT + L DGWLNTGD+G +H+
Sbjct: 436 EVFLDTEVGKFVFGRKGEIHVKGKQVMAGYYKNPDATNRVL-VDGWLNTGDLGIFTANHN 494
Query: 368 RGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAI 427
L + GR+K+TIVL GENVEP+ +E L S I Q +V+GQDQ+ +
Sbjct: 495 ----------LRIVGRSKETIVLLGGENVEPVPIESKILESEWIDQCMVVGQDQKYLSVL 544
Query: 428 IVPD 431
+ P+
Sbjct: 545 VYPN 548
>gi|183219760|ref|YP_001837756.1| long-chain-fatty-acid--CoA ligase [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
gi|189909895|ref|YP_001961450.1| long-chain-fatty-acid--CoA ligase [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167774571|gb|ABZ92872.1| Long-chain-fatty-acid--CoA ligase [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167778182|gb|ABZ96480.1| Long-chain-fatty-acid--CoA ligase [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
Length = 682
Score = 254 bits (649), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 175/520 (33%), Positives = 267/520 (51%), Gaps = 70/520 (13%)
Query: 24 VFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKN 83
+ + ++++ GRE R + R I DD+ T +YTSGTTG PKGVML H N
Sbjct: 148 ILHFYDLLEKGRELRSKGKREAEKR----MSGIKPDDLYTLIYTSGTTGMPKGVMLMHSN 203
Query: 84 LLHQIRSLYD-IVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQR 142
++HQ+ + + D+ LS+LP WH++ER YF G YT V L++D+Q+
Sbjct: 204 MIHQMHYVVPRVAKVTPDDRMLSILPVWHIFERVVEYFAIINGGSTYYTKVTELRNDIQK 263
Query: 143 YQPHYMISVPLVYETLYSGIQKQIF---TSSAARRVVARALIRISFAYTAFKRIYEGFCL 199
+P +M S P V+E++Y+GI +I + RR + + S Y A R +G+ +
Sbjct: 264 ARPTFMASAPRVWESIYNGIYTRINDPKQTPPVRRFLFKVAYFFSKHYHAAIRFLKGWEV 323
Query: 200 T---RNQKQPSYL--VALIDWLWARIICAILW-----------------PLHLLA----- 232
RN Q L V+++ L+ + PL++LA
Sbjct: 324 DYEGRNILQSLVLSIVSIVKLLFTGPFTLTILSLVASQFLVPEESPLKTPLYVLAGLGVL 383
Query: 233 ------EKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVI 285
+++V KI+ A G +A +SGGG+L H+D F+ IG+ V GYG+TE+ PVI
Sbjct: 384 FNSFTLDRIVLSKIRQATGGHLRATLSGGGALQKHVDAFFMDIGITVLEGYGMTETGPVI 443
Query: 286 AARRPTCNVLGSVGHPINHTEIKIVDAETNEVL-----------PAGSKGIVKVRGSQVM 334
+AR ++GSVG + ++++I D N + G KG+V ++G QVM
Sbjct: 444 SARTFDRPIMGSVGDIVPLSQVQIRDDAGNVLCHIDDKRNIIFGKLGVKGVVHLKGPQVM 503
Query: 335 QGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGE 394
+GY+KNP TK+ + D W+NTGDIG I L L GRAKDTIVL GE
Sbjct: 504 KGYYKNPETTKKTI-VDNWMNTGDIGMI----------NFKKTLTLTGRAKDTIVLLGGE 552
Query: 395 NVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASEL-S 453
NVEP+ +E S I+Q +V+GQDQ+ G+IIVPD + ++ A+ I + +L +
Sbjct: 553 NVEPVPIENKIDESPYIKQSMVVGQDQKVLGSIIVPDFDALIPWAEENGITEKNPEKLIT 612
Query: 454 KEKTISLLYGELRKWTS-KCSF----QIGPIHVVDEPFTV 488
K I E+R + S K F Q+ + ++ +PF V
Sbjct: 613 HPKVIEFYKKEVRNFNSVKTGFKNFEQVQYVTLITKPFEV 652
>gi|203284497|ref|YP_002222237.1| long-chain-fatty-acid CoA ligase [Borrelia duttonii Ly]
gi|201083940|gb|ACH93531.1| long-chain-fatty-acid CoA ligase [Borrelia duttonii Ly]
Length = 643
Score = 254 bits (648), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 158/467 (33%), Positives = 251/467 (53%), Gaps = 35/467 (7%)
Query: 17 DIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKG 76
D + I + SY +++ LG + K + D + E + D+AT +YTSGTTG PKG
Sbjct: 145 DKLGNITIISYRQLLSLGHDYLKDYPKMFDL----ELEKVSGKDVATIIYTSGTTGFPKG 200
Query: 77 VMLTHKNLLHQIRSLYDIVPA-ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN 135
V+L H++ + Q+ + D +P+ E G +S+LP WH +ER C Y + G+ + Y+
Sbjct: 201 VVLRHESFIFQLDRINDYLPSLEPGQIMISILPLWHSFERTCEYIVALNGLSIAYSKPVG 260
Query: 136 --LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRI 193
L D PH +ISVP ++E + +GI K++ + S ++++ +++ Y
Sbjct: 261 PILLKDFAALNPHAIISVPRIWEGIRAGIIKKV-SESFLKKILFNFFLKVGIFYVKLMEK 319
Query: 194 YEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKA-GVS 252
+ G L ++ ++L++ + I +++P L LV+KKI+ A+G G+S
Sbjct: 320 FLG--LVPIYRKSNFLISFFVKIIYLIGLILIFPFKFLGHILVFKKIKKALGKRFIFGIS 377
Query: 253 GGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDA 312
GGG+L ++D F++A+G+ V GYGLTE+ PV++ RR V +VG E K+VD
Sbjct: 378 GGGALVDYVDYFFKAVGIVVLEGYGLTETGPVLSVRRLKSPVANTVGPLFPDIEYKVVDH 437
Query: 313 ETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSR 372
N VLP G KG + V+ QVM GYFK+ + T++ L DGW TGD+
Sbjct: 438 NGN-VLPPGEKGELWVKSPQVMSGYFKDETMTREVLTRDGWFKTGDL------------- 483
Query: 373 RCGGV---LVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIV 429
C + + + GR+KDTIVL GEN+EP +E A +S I +VV+GQDQ+ GAIIV
Sbjct: 484 VCATINDEISIVGRSKDTIVLRGGENIEPEPIERALSKSVFIENVVVVGQDQKFLGAIIV 543
Query: 430 PDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSKCSFQI 476
P+ E + A I + +L + ++ K+ SKC I
Sbjct: 544 PNFEVLEKWAISSGIAFSSHDDLLSNELVN-------KFYSKCILDI 583
>gi|392403578|ref|YP_006440190.1| AMP-dependent synthetase and ligase [Turneriella parva DSM 21527]
gi|390611532|gb|AFM12684.1| AMP-dependent synthetase and ligase [Turneriella parva DSM 21527]
Length = 634
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 166/478 (34%), Positives = 252/478 (52%), Gaps = 42/478 (8%)
Query: 1 MRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDD 60
++ II + G K P + I V+S +EII+ G + A N +R + DD
Sbjct: 133 LKTIIFVNGAK----PQVPSNITVYSLNEIIEKGNAAHAA----NPSRFADLGGRVAEDD 184
Query: 61 IATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF 120
+ T +YTSGTTGNPKGVM T K+L +I + D +P +G + LPPWHV ER
Sbjct: 185 LVTIIYTSGTTGNPKGVMHTQKSLAWEIWHVADGLPLISGGVTMGFLPPWHVAERLIESV 244
Query: 121 IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARAL 180
++G+ + +T+V L DLQ +P +++SVP V+E+ Y+ + + +S VA+ +
Sbjct: 245 ALTKGVAIAFTSVATLAKDLQEARPTFLLSVPRVWESFYNKVIDGVKKASP----VAQKI 300
Query: 181 IRISFAYTAFKRIYEGFCLTRNQ---KQPSYLVALIDWLWARIICAILWPLHLLAEKLVY 237
+ ++A E L+ + ++PS L L A + +L+ +LLA+ ++
Sbjct: 301 FHFA-RWSAMHFSLEKDILSNTKYRLEKPSILFHLFRRPAALVNLVLLFIPNLLAQVILA 359
Query: 238 KKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 297
K + G + +SG G+LP HID F+ +IG+ + YG+TE+ V R V+G+
Sbjct: 360 KVRRGLGGRVQFALSGAGALPEHIDRFFYSIGIAIVETYGMTETGGVTCRRTYPATVIGT 419
Query: 298 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 357
VG PI T +K++D NEV +KG+ G +M+GY+K T + L +DGWLN+G
Sbjct: 420 VGKPIKGTRVKLLDDHGNEVTKPNTKGVCWHTGPHIMKGYYKEDQKTSEVL-KDGWLNSG 478
Query: 358 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 417
DI G L GRAKDTIVL GENVEP +E+ ++S I QIVV+
Sbjct: 479 DI----------LVYTANGELKFAGRAKDTIVLFGGENVEPQPIEDTLIQSEYIHQIVVV 528
Query: 418 GQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSKCSFQ 475
GQD++ GA+IVP KE VL +A+ ++L L E+R W Q
Sbjct: 529 GQDKKTLGALIVPAKEAVLK--------YAEENKLQ-------LPAEMRDWPVNADIQ 571
>gi|398334342|ref|ZP_10519047.1| long-chain-fatty-acid--CoA ligase [Leptospira kmetyi serovar
Malaysia str. Bejo-Iso9]
Length = 583
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 154/421 (36%), Positives = 238/421 (56%), Gaps = 27/421 (6%)
Query: 29 EIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI 88
++I G+E R + + + + R I DD+ T +YTSGTTG PKGVMLTH N++ Q+
Sbjct: 158 DLIAKGKELRASGNRNVEER----VAAIRPDDLFTIIYTSGTTGEPKGVMLTHANMISQL 213
Query: 89 RSLYDIVPAENG--DKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 146
R+ +P E G D+FLS+LP WH +ER + G YT +RN+K+DL +P
Sbjct: 214 RN----IPIEIGPKDRFLSILPVWHSFERVFQMGTIATGAGQYYTNIRNIKEDLLIVKPT 269
Query: 147 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 206
+M S P ++E ++ GIQ +I + S +R++ ++ + ++G L +
Sbjct: 270 FMASAPRLWENIFHGIQSKIQSGSTLKRILFKSAYFCALKVQRALNFFKGNELDLEGR-- 327
Query: 207 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAG-VSGGGSLPMHIDLFY 265
+ L +L + + + I +++ + +V KKI+ A G G VSGGG+LP HID F+
Sbjct: 328 NILKSLCMFGQSVLNIVIFSIPYMILDLIVLKKIRQATGGKLRGTVSGGGALPFHIDEFF 387
Query: 266 EAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVL---PAGS 322
IG+ + GYGLTE+SP +A R P V+GSVG EI + D E +L G
Sbjct: 388 NVIGIPLFEGYGLTETSPGLAFRTPDHLVIGSVGPLFPEVEILLKDVENGNILYPPQKGV 447
Query: 323 KGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEG 382
KG V VRG Q+M+GY+K P T + + +DGW NTGD+G I +++ L + G
Sbjct: 448 KGEVHVRGPQIMKGYYKRPDVTAKVI-QDGWFNTGDLGLITYNNT----------LKIVG 496
Query: 383 RAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRL 442
R K+T+VL GEN+EP+ +E +S I Q++V+GQDQ+ A+++P + L + L
Sbjct: 497 RTKETVVLLNGENIEPVPIENKLAQSPFIDQVMVVGQDQKFLTALVLPVLDRFLGLRENL 556
Query: 443 S 443
S
Sbjct: 557 S 557
>gi|119952940|ref|YP_945149.1| long-chain-fatty-acid--CoA ligase [Borrelia turicatae 91E135]
gi|119861711|gb|AAX17479.1| long-chain-fatty-acid--CoA ligase [Borrelia turicatae 91E135]
Length = 630
Score = 253 bits (646), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 143/415 (34%), Positives = 235/415 (56%), Gaps = 24/415 (5%)
Query: 24 VFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKN 83
+++Y E I +G +SR+ D I DD+AT +YTSGTTGNPKGVML+H N
Sbjct: 147 IYTYKECISIGDKSRR------DEEIIEILSNINPDDMATIIYTSGTTGNPKGVMLSHAN 200
Query: 84 LLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAV--RNLKDDLQ 141
L+Q+ S ++ G F+ +LP WH ++R+ Y IF +G+ +++++ RN+ DD++
Sbjct: 201 FLYQVSSFSRMINTSEGQIFMCILPIWHSFQRSFSYNIFLKGMTCLFSSIVPRNMLDDMK 260
Query: 142 RYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTR 201
PHY+ +VP L+ I++ IF A + ++ L +I I L
Sbjct: 261 NVNPHYIAAVP----RLWIAIKQNIFKEVAKKPFFSKLLFKIFVKSACLNDICYRIILGL 316
Query: 202 NQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMH 260
L+ + L + +PL +L + +V+KKI+ +G + G++GGGS+ +
Sbjct: 317 YPDNGFDLLFPMKKLLGILGLIFFFPLRVLGDLIVFKKIKKVLGNNFVVGITGGGSMSLS 376
Query: 261 IDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA 320
+ F+ +IG+++ YGLTE+SP +A+ ++G+ G + T +I D N++
Sbjct: 377 VVRFFNSIGIELANAYGLTEASPGVASNEHEKIMIGTCGRILPETVAEIRDENGNKLKTP 436
Query: 321 GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVL 380
G KGI+ ++G QVM GY+++ AT+Q + DG+LNTGDI ++ + V+ +
Sbjct: 437 G-KGILFIKGPQVMIGYYQDEDATRQVIGSDGFLNTGDIVKLSKDN----------VVQI 485
Query: 381 EGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 435
GR KDTIVL+ GEN+EP +E S LI + VV+GQDQ+ GA+I+P+ EE+
Sbjct: 486 IGREKDTIVLNNGENIEPAPIEIKLEESLLIEKAVVVGQDQKFLGALILPNFEEI 540
>gi|187918454|ref|YP_001884017.1| long-chain-fatty-acid--CoA ligase [Borrelia hermsii DAH]
gi|119861302|gb|AAX17097.1| long-chain-fatty-acid--CoA ligase [Borrelia hermsii DAH]
Length = 643
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 157/463 (33%), Positives = 252/463 (54%), Gaps = 35/463 (7%)
Query: 17 DIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKG 76
D + I + SY +++ +G + K N + E + DIAT +YTSGTTG PKG
Sbjct: 145 DKLGNITIISYKKLLSVGYDYLK----DNPKMFDSELEKVSGKDIATIIYTSGTTGLPKG 200
Query: 77 VMLTHKNLLHQIRSLYDIVPA-ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN 135
V+L H++ + Q+ + + +P E G +S+LP WH +ER+C Y + GI + Y+
Sbjct: 201 VVLRHESFIFQLDRISNYLPTLEPGKIMISILPLWHSFERSCEYIVTLNGIAVAYSKPIG 260
Query: 136 --LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRI 193
L D PH +ISVP ++E + GI K++ + S +R++ +++ Y K
Sbjct: 261 PILLKDFATLNPHAIISVPRIWEGIRIGIIKRV-SESFLKRILFNVFLKVGIIYVKLKEK 319
Query: 194 YEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVS 252
+ GF K+ +++V+ + ++ P L LV++KI+ A+G + G+S
Sbjct: 320 FLGFVPV--YKKSNFVVSFFMKVIYLAGLILILPFKFLGYVLVFRKIKKALGKRFEFGIS 377
Query: 253 GGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAAR---RPTCNVLGSVGHPINHTEIKI 309
GGG+L ++D F++A+G+ V GYGLTE+ PV++ R RP N +VG + E ++
Sbjct: 378 GGGALVDYVDYFFKAVGIVVLEGYGLTETGPVLSVRCLRRPVAN---TVGPLLPDVEYRV 434
Query: 310 VDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRG 369
VD++ N LP G KG + VR QVM GYFK+ + T++ L DGW TGD+ ++
Sbjct: 435 VDSDGN-ALPPGEKGELWVRSPQVMSGYFKDEATTREVLTRDGWFKTGDLVCATMNNE-- 491
Query: 370 RSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIV 429
+ + GR KDTIVL GEN+EP +E A +S I +VV+GQDQ+ GAIIV
Sbjct: 492 --------ISIVGRTKDTIVLRGGENIEPEPIERALSKSVFIESVVVVGQDQKFLGAIIV 543
Query: 430 PDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSKC 472
P+ E + A ++ + +L ++++ LY SKC
Sbjct: 544 PNFEVLEKWAGSNGVLFSSRDDLLSNESVNKLY-------SKC 579
>gi|203284063|ref|YP_002221803.1| long-chain-fatty-acid CoA ligase [Borrelia duttonii Ly]
gi|201083506|gb|ACH93097.1| long-chain-fatty-acid CoA ligase [Borrelia duttonii Ly]
Length = 629
Score = 252 bits (643), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 144/418 (34%), Positives = 235/418 (56%), Gaps = 24/418 (5%)
Query: 21 EIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLT 80
E V++Y E I +G +R+ D I +D+AT +YTSGTTGNPKGVML+
Sbjct: 144 EFEVYTYKECILIGENARQ------DEEIIETVNNISLNDMATIIYTSGTTGNPKGVMLS 197
Query: 81 HKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAV--RNLKD 138
H N L+Q+ S ++ G F+ +LP WH ++R+ Y IF +G+ +++ + RN+ D
Sbjct: 198 HANFLYQVSSFSRMISVTEGQIFMCILPIWHSFQRSFSYNIFLKGMTCLFSNIVPRNMLD 257
Query: 139 DLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFC 198
D++ PHY+ +VP L+ I++ I + + R L RI + I
Sbjct: 258 DIRNINPHYIAAVP----RLWIAIKQNIVKEISKKNFFVRLLFRIFVKFACINDICRRII 313
Query: 199 LTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSL 257
L L+ + + + +L+PL++L +V+KKI+ +G + G+SGGGS+
Sbjct: 314 LGLYPDNGLDLLIPFKKILSILGVIVLFPLNVLGNLIVFKKIKKVLGNNFVVGISGGGSI 373
Query: 258 PMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEV 317
P+++ F+ AIG+ + YGLTE+SP +A+ ++G+ G + T +I D E
Sbjct: 374 PLYVVRFFNAIGINLANAYGLTEASPGVASNEYGKIIVGTSGKILPGTIAEIRD-ENGVK 432
Query: 318 LPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGV 377
L KG++ ++G QVM GY+++ AT+Q + +DG+L+TGDI ++ + V
Sbjct: 433 LKKPGKGVLFIKGPQVMIGYYQDIEATRQVIGDDGFLDTGDIVKLSKDN----------V 482
Query: 378 LVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 435
+ + GR KDTIVL+ GEN+EP +E S LI + VV+GQDQ+ GA+I+P+ EE+
Sbjct: 483 VQIIGREKDTIVLNNGENIEPAPIEIKLEESLLIEKAVVVGQDQKFLGALILPNFEEI 540
>gi|386859368|ref|YP_006272074.1| Long-chain-fatty-acid CoA ligase [Borrelia crocidurae str. Achema]
gi|384934249|gb|AFI30922.1| Long-chain-fatty-acid CoA ligase [Borrelia crocidurae str. Achema]
Length = 629
Score = 252 bits (643), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 144/418 (34%), Positives = 235/418 (56%), Gaps = 24/418 (5%)
Query: 21 EIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLT 80
E V++Y E I +G +R+ D I +D+AT +YTSGTTGNPKGVML+
Sbjct: 144 EFEVYTYKECILIGENARQ------DEEIIETVNNISLNDMATIIYTSGTTGNPKGVMLS 197
Query: 81 HKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAV--RNLKD 138
H N L+Q+ S ++ G F+ +LP WH ++R+ Y IF +G+ +++ + RN+ D
Sbjct: 198 HANFLYQVSSFSRMISVTEGQIFMCILPIWHSFQRSFSYNIFLKGMTCLFSNIVPRNMLD 257
Query: 139 DLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFC 198
D++ PHY+ +VP L+ I++ I + + R L RI + I
Sbjct: 258 DIRNINPHYIAAVP----RLWIAIKQNIVKEVSKKNFFVRLLFRIFVKFACINDICRRII 313
Query: 199 LTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSL 257
L L+ + + + +L+PL++L +V+KKI+ +G + G+SGGGS+
Sbjct: 314 LGLYPDNGLDLLIPFKKILSILGVIVLFPLNVLGNLIVFKKIKKVLGNNFVVGISGGGSI 373
Query: 258 PMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEV 317
P+++ F+ AIG+ + YGLTE+SP +A+ ++G+ G + T +I D E
Sbjct: 374 PLYVVRFFNAIGINLANAYGLTEASPGVASNEYGKIIVGTSGKILPGTIAEIRD-ENGVK 432
Query: 318 LPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGV 377
L KG++ ++G QVM GY+++ AT+Q + +DG+L+TGDI ++ + V
Sbjct: 433 LKKPGKGVLFIKGPQVMIGYYQDIEATRQVIGDDGFLDTGDIVKLSKDN----------V 482
Query: 378 LVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 435
+ + GR KDTIVL+ GEN+EP +E S LI + VV+GQDQ+ GA+I+P+ EE+
Sbjct: 483 VQIIGREKDTIVLNNGENIEPAPIEIKLEESLLIEKAVVVGQDQKFLGALILPNFEEI 540
>gi|51245185|ref|YP_065069.1| long-chain-fatty-acid--CoA ligase [Desulfotalea psychrophila LSv54]
gi|50876222|emb|CAG36062.1| related to long-chain-fatty-acid--CoA ligase [Desulfotalea
psychrophila LSv54]
Length = 649
Score = 252 bits (643), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 151/411 (36%), Positives = 232/411 (56%), Gaps = 19/411 (4%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 118
DD T +YTSGTTG PKGV L++KN++H + L I+ D +LS+LP WH++ER
Sbjct: 198 DDFVTIIYTSGTTGVPKGVQLSNKNIMHNVDCLPGIIRLTEEDLWLSILPSWHIFERTAE 257
Query: 119 YFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 178
Y + G L+Y+ VR L DL+RY+P + +VP V+E+LYS + + A +
Sbjct: 258 YVALAAGTTLVYSTVRTLVQDLERYKPTLLATVPRVWESLYSKVDSGVRKKGAMAYRIFT 317
Query: 179 ALIRISFAYTAFKRIYEGFCLTRNQ--KQPSYLVALIDWLWARIICAILWPLHLLAEKLV 236
+LI S Y +R + L R +P+ LV A + L+ +L AEK +
Sbjct: 318 SLIWCSSTYRRNRREF----LDRLPVFAKPNSLVRFGQKGVALVKMLFLYLPYLFAEKKL 373
Query: 237 YKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLG 296
Q G + +SGGGSL +++ + +A+G+++ YG+TE SP IA R C V G
Sbjct: 374 NVVRQRFGGRLRLAISGGGSLADYLEEWVDAVGIRIVNAYGMTECSPAIAGRGLDCRVYG 433
Query: 297 SVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNT 356
+VG + +T I++VD + EV G +G+++V G QVM GY+KN ++ +DG+ T
Sbjct: 434 TVGAGVTNTRIRLVDDDGLEV-SQGKEGLIEVVGDQVMGGYYKNDVGNIESFTDDGFFRT 492
Query: 357 GDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVV 416
GD+G R G LVL GRAKD IVLS+GEN++P +E A ++ ++
Sbjct: 493 GDLG----------RRTISGDLVLTGRAKDIIVLSSGENIDPSRIESAISVFPFVQDAIL 542
Query: 417 IGQDQRRPGAIIVPDKEEVL-MAAKRLSIVHADASELSKE-KTISLLYGEL 465
+GQD++ GA++V D+EE+L A R S + + EL K+ K + L+ E+
Sbjct: 543 VGQDKKGLGALLVADREELLKYADSRFSHLRKASQELLKDNKVLELIRKEM 593
>gi|203287602|ref|YP_002222617.1| long-chain-fatty-acid CoA ligase [Borrelia recurrentis A1]
gi|201084822|gb|ACH94396.1| long-chain-fatty-acid CoA ligase [Borrelia recurrentis A1]
Length = 629
Score = 251 bits (642), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 144/418 (34%), Positives = 235/418 (56%), Gaps = 24/418 (5%)
Query: 21 EIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLT 80
E V++Y E I +G +R+ D I +D+AT +YTSGTTGNPKGVML+
Sbjct: 144 EFEVYTYKECILIGENARQ------DEEIIETVNNISLNDMATIIYTSGTTGNPKGVMLS 197
Query: 81 HKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAV--RNLKD 138
H N L+Q+ S ++ G F+ +LP WH ++R+ Y IF +G+ +++ + RN+ D
Sbjct: 198 HANFLYQVSSFSRMISVTEGQIFMCILPIWHSFQRSFSYNIFLKGMTCLFSNIVPRNMLD 257
Query: 139 DLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFC 198
D++ PHY+ +VP L+ I++ I + + R L RI + I
Sbjct: 258 DIRNINPHYIAAVP----RLWIAIKQNIVKEISKKNFFVRLLFRIFVKFACISDICRRII 313
Query: 199 LTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSL 257
L L+ + + + +L+PL++L +V+KKI+ +G + G+SGGGS+
Sbjct: 314 LGLYPDNGLDLLIPFKKILSILGVIVLFPLNVLGNLIVFKKIKKVLGNNFVVGISGGGSI 373
Query: 258 PMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEV 317
P+++ F+ AIG+ + YGLTE+SP +A+ ++G+ G + T +I D E
Sbjct: 374 PLYVVRFFNAIGINLANAYGLTEASPGVASNEYGKIIVGTSGKILPGTIAEIRD-ENGVK 432
Query: 318 LPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGV 377
L KG++ ++G QVM GY+++ AT+Q + +DG+L+TGDI ++ + V
Sbjct: 433 LKKPGKGVLFIKGPQVMIGYYQDIEATRQVIGDDGFLDTGDIVKLSKDN----------V 482
Query: 378 LVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 435
+ + GR KDTIVL+ GEN+EP +E S LI + VV+GQDQ+ GA+I+P+ EE+
Sbjct: 483 VQIIGREKDTIVLNNGENIEPAPIEIKLEESLLIEKAVVVGQDQKFLGALILPNFEEI 540
>gi|418748591|ref|ZP_13304883.1| AMP-binding enzyme [Leptospira licerasiae str. MMD4847]
gi|404275660|gb|EJZ42974.1| AMP-binding enzyme [Leptospira licerasiae str. MMD4847]
Length = 678
Score = 251 bits (641), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 179/521 (34%), Positives = 262/521 (50%), Gaps = 76/521 (14%)
Query: 29 EIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI 88
++I G+E R + R E I DD+ T +YTSGTTG PKGVML H N++HQ+
Sbjct: 145 DLIATGKELRAKGGHKTEKR----IEGIKPDDLFTLIYTSGTTGMPKGVMLMHSNMVHQM 200
Query: 89 RSLYDIVPAE----NGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQ 144
+ ++ + + D LS+LP WH++ER Y S GI YT V +L++DL + +
Sbjct: 201 EYVVPLILKKSLLRDDDSMLSILPVWHIFERVVEYSAISLGISTFYTKVADLRNDLAKAR 260
Query: 145 PHYMISVPLVYETLYSGIQKQIF---TSSAARRVVARALIRISFAYTAFKRIYEGFCLTR 201
P +M S P V+E++Y+GI +I + R+ + S Y A R G +
Sbjct: 261 PSFMASAPRVWESIYTGIYNKINDPKQTPPVRKFLFNTAYLFSKNYNAGIRFLTGKEVDY 320
Query: 202 NQKQ------------------PSYLVALIDWLWARII------CAILWPLHLLA----- 232
+ + V+LI + I A L P+ L
Sbjct: 321 ENRSIFKSLALGIKAIGQVVLFGPFTVSLISAVGYSYIKMYKPELAFLAPVLLTIAILGL 380
Query: 233 -------EKLVYKKIQSAIGISKAG-VSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPV 284
+ +V KI+ A G G +SGGG+L H+D F+ IG+ V GYG+TES+PV
Sbjct: 381 IFNFKTLDTIVLSKIRQATGGRLRGTLSGGGALQRHVDNFFNDIGLLVLEGYGMTESAPV 440
Query: 285 IAARRPTCNVLGSVGHPINHTEIKIVDAETN---------EVLPA--GSKGIVKVRGSQV 333
I+ R ++GSVG+ + TE+++ D N ++L G KGIV ++G QV
Sbjct: 441 ISVRHYDHPIIGSVGYIVPKTELQLRDDHGNVLTHINDQRQLLAGKLGVKGIVHIKGPQV 500
Query: 334 MQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTG 393
M+GY+KNP TK+ + DGWLNTGDIG+I H+ L L GRAK+T+VL G
Sbjct: 501 MKGYYKNPEVTKKTI-VDGWLNTGDIGFINFKHT----------LTLTGRAKETVVLLGG 549
Query: 394 ENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASEL- 452
ENVEP+ +E S I+Q +V GQDQ+ GAIIVPD E + + I D +L
Sbjct: 550 ENVEPVPIENRMDESPYIKQSMVFGQDQKVLGAIIVPDLEVLQPWLAQNGIQAKDIKDLI 609
Query: 453 SKEKTISLLYGELRKWTS-KCSFQ----IGPIHVVDEPFTV 488
K I E+R++ S K F+ I + + +PF +
Sbjct: 610 DNPKVIEFFKKEIREYNSTKHGFKSFELIQHVVIAQKPFEI 650
>gi|291288156|ref|YP_003504972.1| AMP-dependent synthetase and ligase [Denitrovibrio acetiphilus DSM
12809]
gi|290885316|gb|ADD69016.1| AMP-dependent synthetase and ligase [Denitrovibrio acetiphilus DSM
12809]
Length = 627
Score = 251 bits (641), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 138/385 (35%), Positives = 222/385 (57%), Gaps = 15/385 (3%)
Query: 52 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWH 111
K + G DDI T +YTSGTTG PKGVMLT++N++H + + D++ ++ D +LS+LP WH
Sbjct: 171 KADVGGIDDIFTIIYTSGTTGYPKGVMLTNRNIMHNLDIIPDLIALKDDDIWLSILPAWH 230
Query: 112 VYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSA 171
++E + G L+Y+ V+ DL+ Y+P + +VP V+E LYS + +
Sbjct: 231 IFEHTVELVAMANGCRLVYSGVKTFSADLEHYKPTIVATVPRVWEALYSKVIATLDKQGG 290
Query: 172 ARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLL 231
+ + L R S +Y R +G L +KQ + + I A + A L PL ++
Sbjct: 291 RKLSLFLMLCRASASYNRQLRRLKGH-LPEFRKQ-NIFIKFIKNTGAALKLAALTPLKII 348
Query: 232 AEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRP 290
A K +K +Q G + VSGGGSLP +++ + +AIG+++ YG+TE +P IA R
Sbjct: 349 AMK-KFKAVQDKFGGRLRLAVSGGGSLPAYLESWLDAIGLRIVNAYGMTECAPAIAGRAL 407
Query: 291 TCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDE 350
C+V G++G + TEI+IV+ E ++LPAG +G ++++G QV GY++ P + A +
Sbjct: 408 NCDVFGTLGPAVPGTEIRIVN-EDGDILPAGEEGEIQIQGPQVFPGYYELPEENEHAFTD 466
Query: 351 DGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSL 410
DG+ TGD+G + G L + GR KD IVL+ GEN++P +E A
Sbjct: 467 DGFFRTGDLGMLT----------LTGELKITGRMKDIIVLANGENIDPTRIESAITMLPF 516
Query: 411 IRQIVVIGQDQRRPGAIIVPDKEEV 435
++ V++GQDQ+ A+I+PD E++
Sbjct: 517 VKDAVLVGQDQKSLAALIIPDFEKM 541
>gi|359688978|ref|ZP_09258979.1| long-chain-fatty-acid CoA ligase [Leptospira licerasiae serovar
Varillal str. MMD0835]
gi|418756346|ref|ZP_13312534.1| AMP-binding enzyme [Leptospira licerasiae serovar Varillal str. VAR
010]
gi|384116017|gb|EIE02274.1| AMP-binding enzyme [Leptospira licerasiae serovar Varillal str. VAR
010]
Length = 685
Score = 251 bits (641), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 179/521 (34%), Positives = 262/521 (50%), Gaps = 76/521 (14%)
Query: 29 EIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI 88
++I G+E R + R E I DD+ T +YTSGTTG PKGVML H N++HQ+
Sbjct: 152 DLIATGKELRAKGGHKTEKR----IEGIKPDDLFTLIYTSGTTGMPKGVMLMHSNMVHQM 207
Query: 89 RSLYDIVPAE----NGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQ 144
+ ++ + + D LS+LP WH++ER Y S GI YT V +L++DL + +
Sbjct: 208 EYVVPLILKKSLLRDDDSMLSILPVWHIFERVVEYSAISLGISTFYTKVADLRNDLAKAR 267
Query: 145 PHYMISVPLVYETLYSGIQKQIF---TSSAARRVVARALIRISFAYTAFKRIYEGFCLTR 201
P +M S P V+E++Y+GI +I + R+ + S Y A R G +
Sbjct: 268 PSFMASAPRVWESIYTGIYNKINDPKQTPPVRKFLFNTAYLFSKNYNAGIRFLTGKEVDY 327
Query: 202 NQKQ------------------PSYLVALIDWLWARII------CAILWPLHLLA----- 232
+ + V+LI + I A L P+ L
Sbjct: 328 ENRSIFKSLALGIKAIGQVVLFGPFTVSLISAVGYSYIKMYKPELAFLAPVLLTIAILGL 387
Query: 233 -------EKLVYKKIQSAIGISKAG-VSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPV 284
+ +V KI+ A G G +SGGG+L H+D F+ IG+ V GYG+TES+PV
Sbjct: 388 IFNFKTLDTIVLSKIRQATGGRLRGTLSGGGALQRHVDNFFNDIGLLVLEGYGMTESAPV 447
Query: 285 IAARRPTCNVLGSVGHPINHTEIKIVDAETN---------EVLPA--GSKGIVKVRGSQV 333
I+ R ++GSVG+ + TE+++ D N ++L G KGIV ++G QV
Sbjct: 448 ISVRHYDHPIIGSVGYIVPKTELQLRDDHGNVLTHINDQRQLLAGKLGVKGIVHIKGPQV 507
Query: 334 MQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTG 393
M+GY+KNP TK+ + DGWLNTGDIG+I H+ L L GRAK+T+VL G
Sbjct: 508 MKGYYKNPEVTKKTI-VDGWLNTGDIGFINFKHT----------LTLTGRAKETVVLLGG 556
Query: 394 ENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASEL- 452
ENVEP+ +E S I+Q +V GQDQ+ GAIIVPD E + + I D +L
Sbjct: 557 ENVEPVPIENRMDESPYIKQSMVFGQDQKVLGAIIVPDLEVLQPWLAQNGIQAKDIKDLI 616
Query: 453 SKEKTISLLYGELRKWTS-KCSFQ----IGPIHVVDEPFTV 488
K I E+R++ S K F+ I + + +PF +
Sbjct: 617 DNPKVIEFFKKEIREYNSTKHGFKSFELIQHVVIAQKPFEI 657
>gi|219684804|ref|ZP_03539746.1| long-chain-fatty-acid CoA ligase [Borrelia garinii PBr]
gi|219671749|gb|EED28804.1| long-chain-fatty-acid CoA ligase [Borrelia garinii PBr]
Length = 630
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 147/424 (34%), Positives = 241/424 (56%), Gaps = 36/424 (8%)
Query: 21 EIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLT 80
+ +++Y + I G RK D+ + S+D+AT +YTSGTTGNPKGVML+
Sbjct: 144 DFEIYTYGDCISFGDNLRK------DSEIIEIASKVDSNDMATIIYTSGTTGNPKGVMLS 197
Query: 81 HKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAV--RNLKD 138
H NLL+Q+ S +V + G F+ +LP WH ++R+ Y IF +G+ +++ + R + D
Sbjct: 198 HANLLYQVSSFGLMVDTQVGQIFMCILPIWHSFQRSFSYNIFLKGMVCLFSTIVPRAMLD 257
Query: 139 DLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISF----AYTAFKRIY 194
D++ PHY+ +VP ++ + I K++ R++ I+++F Y +Y
Sbjct: 258 DIKNINPHYIAAVPRLWIAIRQNIYKEVSKKPFISRIIFHFFIKLAFLNDICYRTVMGLY 317
Query: 195 --EGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGV 251
GF L K+ + L IC L+P L L++ K+ +G + G+
Sbjct: 318 PDNGFNLFCPIKKILGIFGL--------IC--LFPFKALGNILIFNKLNKILGNNFVVGI 367
Query: 252 SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVD 311
+GGGS+P+ + F+ +IG+++ YGLTE+SP +A+ + ++G+ G + T +I D
Sbjct: 368 TGGGSMPLSVARFFNSIGIELANAYGLTETSPGVASNKHKKLIIGTCGKILPGTVAEIRD 427
Query: 312 AETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRS 371
A+ N++ G KGI+ V+G QVM GY+K+ AT++ + DG+LNTGDI ++ +
Sbjct: 428 ADGNKLKKPG-KGILFVKGPQVMLGYYKDREATRRIIGPDGFLNTGDIAKLSKDN----- 481
Query: 372 RRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPD 431
V+ + GR KDTIVL+ GENVEP +E S LI + VV+GQDQ+ GA+I+P+
Sbjct: 482 -----VVQIIGREKDTIVLNNGENVEPAPIEIKLEESILIEKAVVVGQDQKFLGALILPN 536
Query: 432 KEEV 435
EE+
Sbjct: 537 FEEI 540
>gi|51598401|ref|YP_072589.1| long-chain-fatty-acid CoA ligase [Borrelia garinii PBi]
gi|51572972|gb|AAU06997.1| long-chain-fatty-acid CoA ligase [Borrelia garinii PBi]
Length = 630
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 157/486 (32%), Positives = 263/486 (54%), Gaps = 45/486 (9%)
Query: 21 EIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLT 80
+ +++Y + I G RK + A K + S+D+AT +YTSGTTGNPKGVML+
Sbjct: 144 DFEIYTYGDCISFGDNLRKDSEIIDIASK------VDSNDMATIIYTSGTTGNPKGVMLS 197
Query: 81 HKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAV--RNLKD 138
H NLL+Q+ S +V + G F+ +LP WH ++R+ Y IF +G+ +++ + R + D
Sbjct: 198 HANLLYQVSSFSLMVDTQVGQIFMCILPIWHSFQRSFSYNIFLKGMVCLFSTIVPRAMLD 257
Query: 139 DLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIY---- 194
D++ PHY+ +VP ++ + I K++ R++ I+++F RI
Sbjct: 258 DIKNINPHYIAAVPRLWIAIRQNINKEVSKKPFISRIIFHFFIKLAFLSDICYRIVMGLY 317
Query: 195 --EGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGV 251
GF L K+ + LI L+P L L++ KI +G + G+
Sbjct: 318 PDNGFNLFFPIKKILGIFGLIS----------LFPFKALGNILIFNKINKILGNNFVVGI 367
Query: 252 SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVD 311
+GGGS+P+ + F+ +IG+++ YGLTE+SP +A+ + ++G+ G + T +I D
Sbjct: 368 TGGGSMPLSVSRFFNSIGIELANAYGLTETSPGVASNKHKKVIIGTCGKILPGTVAEIRD 427
Query: 312 AETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRS 371
A+ N++ G KGI+ V+G QVM GY+K+ AT + + D +LNTGDI ++ +
Sbjct: 428 ADGNKLKKPG-KGILFVKGPQVMLGYYKDREATCRIIGPDSFLNTGDIAKLSKDN----- 481
Query: 372 RRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPD 431
V+ + GR KDTIVL+ GENVEP +E S LI + VV+GQDQ+ GA+I+P+
Sbjct: 482 -----VVQIIGREKDTIVLNNGENVEPAPIEIKLEESILIEKAVVVGQDQKFLGALILPN 536
Query: 432 KEEVLMAAKRLSIVHADASE----LSKEKTISLLYGELRKWTSKCSF-----QIGPIHVV 482
EE+ + + DA+ +S + + E++K ++ + QI ++
Sbjct: 537 FEEINKYLESVGQKIFDANNRRQVISNNIVLKAINDEIKKLINRTNGFKPFEQILKFTLL 596
Query: 483 DEPFTV 488
++PF V
Sbjct: 597 EKPFEV 602
>gi|224532255|ref|ZP_03672887.1| long-chain-fatty-acid CoA ligase [Borrelia valaisiana VS116]
gi|224511720|gb|EEF82126.1| long-chain-fatty-acid CoA ligase [Borrelia valaisiana VS116]
Length = 630
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 159/486 (32%), Positives = 265/486 (54%), Gaps = 45/486 (9%)
Query: 21 EIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLT 80
+ +++Y + I G RK + A K + S+D+AT +YTSGTTG+PKGVML+
Sbjct: 144 DFEIYTYSDCISFGDNLRKDSEIIDIASK------VDSNDMATIIYTSGTTGHPKGVMLS 197
Query: 81 HKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAV--RNLKD 138
H NLL+Q+ S +V + G F+ +LP WH ++R+ Y IF +G+ +++ + R + D
Sbjct: 198 HANLLYQVSSFSLMVDTQLGQIFMCILPIWHSFQRSFSYNIFLKGMVCLFSTIVPRAMLD 257
Query: 139 DLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISF----AYTAFKRIY 194
D++ PHY+ +VP ++ + I K++ R++ I+++F Y A Y
Sbjct: 258 DIKNINPHYIAAVPRLWIAIRQNIYKEVSKKPFISRIIFHFFIKLAFLNDICYRAVMGFY 317
Query: 195 --EGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGV 251
GF L K+ + LI L+P L L++ KI +G + G+
Sbjct: 318 PDSGFSLFFPIKKILGMFGLI----------FLFPFKALGNILIFNKINKILGNNFVVGI 367
Query: 252 SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVD 311
+GGGS+P+ + F+ AIG+++ YGLTE+SP +A+ + ++G+ G + T +I D
Sbjct: 368 TGGGSMPISVVRFFNAIGIELANAYGLTETSPGVASNKHKKVIIGTCGKILPGTVAEIRD 427
Query: 312 AETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRS 371
A+ N++ G KGI+ V+G QVM GY+K+ AT + + DG+LNTGDI ++ +
Sbjct: 428 ADGNKLKKPG-KGILFVKGPQVMLGYYKDREATCRIIGSDGFLNTGDIVKLSKDN----- 481
Query: 372 RRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPD 431
V+ + GR KDTIVL+ GENVEP +E S LI + VV+GQDQ+ GA+I+P+
Sbjct: 482 -----VVQIIGREKDTIVLNNGENVEPAPIEIKLEESILIEKAVVVGQDQKFLGALILPN 536
Query: 432 KEEVLMAAKRLSIVHADASE----LSKEKTISLLYGELRKWTSKCSF-----QIGPIHVV 482
EE+ + + DAS ++ + + E++K ++ + QI ++
Sbjct: 537 FEEINKYLESVGQKIFDASNRRQIIANNIVLKAINDEIKKLINRTNGFKPFEQILKFTLL 596
Query: 483 DEPFTV 488
++PF V
Sbjct: 597 EKPFEV 602
>gi|328949040|ref|YP_004366377.1| long-chain-fatty-acid--CoA ligase., o-succinylbenzoate--CoA ligase
[Treponema succinifaciens DSM 2489]
gi|328449364|gb|AEB15080.1| Long-chain-fatty-acid--CoA ligase., o-succinylbenzoate--CoA ligase
[Treponema succinifaciens DSM 2489]
Length = 645
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 162/473 (34%), Positives = 256/473 (54%), Gaps = 42/473 (8%)
Query: 34 GRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYD 93
G E RK D+ + + E DD+AT ++TSGTTG PKGVML+H N+L Q+ + +
Sbjct: 168 GHEWRKQHPDAVEQ----ELEKGKPDDLATIIFTSGTTGTPKGVMLSHGNILCQLDEVTE 223
Query: 94 IVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN--LKDDLQRYQPHYMISV 151
+ G++ L +LP WH ++RA Y I ++G L Y+ L DLQ+ P+ + +V
Sbjct: 224 RIFLNPGERALLVLPVWHAFQRAVEYVIIAQGGTLCYSKPIGSVLLQDLQKLDPYLLPAV 283
Query: 152 PLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYT-AFKRIYEGFCLTRNQKQPSYL- 209
P V+ +Y GI +++ + +A AL R A + +I + P YL
Sbjct: 284 PRVWSAVYEGIWRKMRKTGG----IAFALFRFFVAEALLWSKIDRKLRRKNTRFSPDYLG 339
Query: 210 --VALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYE 266
++ W W +L+P+ LL LV++KI++ +G + ++G++GGG+ P ++D F+
Sbjct: 340 FWWPVLVWPW-----LLLYPIKLLGNLLVFRKIRAMVGKNFRSGIAGGGAFPKNVDEFFW 394
Query: 267 AIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIV 326
AIGV +Q GYGLTE+SP+I+ R + G+VG P+ E+++VD + +L KG +
Sbjct: 395 AIGVNIQEGYGLTETSPIISVRPIADPIFGNVGTPLRGMEVRVVD-DDGIILGRCKKGTL 453
Query: 327 KVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKD 386
+++G VMQGY+K P T + + DGW +TGDI ++ ++ + L GR KD
Sbjct: 454 QIKGDCVMQGYYKRPDLTDKVMTVDGWFDTGDIAILSVNNE----------IQLRGRKKD 503
Query: 387 TIVLSTGENVEPLELEEAALRSSLIRQIVVIGQ-----DQRRPGAIIVPDKEEVLMAAKR 441
TIVL GEN+EPL +E S I VV G DQ+ A+I+PD++ + A
Sbjct: 504 TIVLQGGENIEPLPIEAKINESRFISTSVVFGTNEKGIDQKYLVALILPDQDAIETYATE 563
Query: 442 LSIVHADASELSKEKTIS-LLYGE-LRKWTSKCSFQ----IGPIHVVDEPFTV 488
I EL++ + I LL GE ++K F+ I I V+ +PF V
Sbjct: 564 NGINFNSYDELAETEAIQKLLEGEVFESISAKNGFKSFERINKIAVITKPFEV 616
>gi|386826469|ref|ZP_10113576.1| AMP-forming long-chain acyl-CoA synthetase [Beggiatoa alba B18LD]
gi|386427353|gb|EIJ41181.1| AMP-forming long-chain acyl-CoA synthetase [Beggiatoa alba B18LD]
Length = 640
Score = 249 bits (635), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 168/479 (35%), Positives = 254/479 (53%), Gaps = 44/479 (9%)
Query: 30 IIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIR 89
+++LG++ R D + + I D+ T +YTSGTTG PKGVML H N++ QI
Sbjct: 156 LMELGKQRRA----QGDRQVEERVAGILPSDLFTLIYTSGTTGTPKGVMLPHSNMIAQIA 211
Query: 90 SLYD----IVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQP 145
S+ D +VP D+FLS+LP WH++ER G YT VR L +DL+ +P
Sbjct: 212 SVQDLPIQVVPE---DRFLSILPVWHIFERVIEMVAVYYGAPTYYTNVRQLAEDLKTVRP 268
Query: 146 HYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQ 205
M S P ++E++Y I + +S R+ + + + + +G L +
Sbjct: 269 TLMASAPRLWESIYQRILATLKNASPIRKTLFNLAYACARQFHLAQDFLKGNQLDITGRS 328
Query: 206 PSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIG-ISKAGVSGGGSLPMHIDLF 264
+ L R+ AI + + L + +V K+++ G + VSGGG+LP HID F
Sbjct: 329 AAESAGLTVLNLGRL--AIFFLPYKLLDTIVLSKLRAVTGGCFRGTVSGGGALPRHIDEF 386
Query: 265 YEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVL---PA- 320
+ IG+ + GYGLTE V++ R V+G+VG T I+IVD TNEVL PA
Sbjct: 387 FNFIGIPILEGYGLTEGM-VLSVRTFGQRVIGTVGVLFPITTIRIVDINTNEVLYPNPAK 445
Query: 321 -----GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCG 375
G +G + V+G QVM Y+KN AT +A EDGWLNTGD+G ++S
Sbjct: 446 KGEGRGLQGEIHVKGEQVMHSYYKNDEATAKAFKEDGWLNTGDLGIFTFNNS-------- 497
Query: 376 GVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 435
L + GR+KDTIVL GENVEP+ +E +S LI Q +++GQD++ G ++VP
Sbjct: 498 --LKITGRSKDTIVLLGGENVEPVPIETRLCQSDLIEQCMLVGQDKKTIGVLLVP----A 551
Query: 436 LMAAKRLSIVHADASELSKEKTIS--LLYGELRKWTSKCSFQ----IGPIHVVDEPFTV 488
L K+L I + +ELS++ + L+ ++K F+ I ++V+D+PF V
Sbjct: 552 LEGFKKLGITAENVAELSQQPAVREHLVQAVKTLISTKQGFKPFEVIQDVYVLDKPFEV 610
>gi|219685905|ref|ZP_03540709.1| long-chain-fatty-acid CoA ligase [Borrelia garinii Far04]
gi|219672547|gb|EED29582.1| long-chain-fatty-acid CoA ligase [Borrelia garinii Far04]
Length = 630
Score = 248 bits (634), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 147/424 (34%), Positives = 240/424 (56%), Gaps = 36/424 (8%)
Query: 21 EIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLT 80
+ + +Y + I G RK D+ + S+D+AT +YTSGTTGNPKGVML+
Sbjct: 144 DFEIHTYGDCISFGDNLRK------DSEIIEIASKVDSNDMATIIYTSGTTGNPKGVMLS 197
Query: 81 HKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAV--RNLKD 138
H NLL+Q+ S +V + G F+ +LP WH ++R+ Y IF +G+ +++ + R + D
Sbjct: 198 HANLLYQVSSFGLMVDTQVGQIFMCILPIWHSFQRSFSYNIFLKGMVCLFSTIVPRAMLD 257
Query: 139 DLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISF----AYTAFKRIY 194
D++ PHY+ +VP ++ + I K++ R++ I+++F Y +Y
Sbjct: 258 DIKNINPHYIAAVPRLWIAIRQNIYKEVSKKPFISRIIFHFFIKLAFLNDICYRTVMGLY 317
Query: 195 --EGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGV 251
GF L K+ + L IC L+P L L++ K+ +G + G+
Sbjct: 318 PDNGFNLFCPIKKILGIFGL--------IC--LFPFKALGNILIFNKLNKILGNNFVVGI 367
Query: 252 SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVD 311
+GGGS+P+ + F+ +IG+++ YGLTE+SP +A+ + ++G+ G + T +I D
Sbjct: 368 TGGGSMPLSVARFFNSIGIELANAYGLTETSPGVASNKHKKLIIGTCGKILPGTVAEIRD 427
Query: 312 AETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRS 371
A+ N++ G KGI+ V+G QVM GY+K+ AT++ + DG+LNTGDI ++ +
Sbjct: 428 ADGNKLKKPG-KGILFVKGPQVMLGYYKDREATRRIIGPDGFLNTGDIAKLSKDN----- 481
Query: 372 RRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPD 431
V+ + GR KDTIVL+ GENVEP +E S LI + VV+GQDQ+ GA+I+P+
Sbjct: 482 -----VVQIIGREKDTIVLNNGENVEPAPIEIKLEESILIEKAVVVGQDQKFLGALILPN 536
Query: 432 KEEV 435
EE+
Sbjct: 537 FEEI 540
>gi|398342591|ref|ZP_10527294.1| long-chain-fatty-acid CoA ligase [Leptospira inadai serovar Lyme
str. 10]
Length = 545
Score = 248 bits (634), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 172/519 (33%), Positives = 262/519 (50%), Gaps = 76/519 (14%)
Query: 29 EIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI 88
E++ GR+ R+ S + + R ++ S+D+ T +YTSGTTG PKGV LTH N++ Q+
Sbjct: 3 ELLSRGRKLREQGSRNVEER----VLSLKSEDLFTIIYTSGTTGQPKGVQLTHSNMIFQV 58
Query: 89 RSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYM 148
S+ I+ D+ +S+LP WH++ER Y G Y+ + +LK +L ++P +
Sbjct: 59 SSVSPILEITENDRAISILPIWHIFERFMEYCFLHVGGTTYYSNIPDLKQNLTDFKPTFF 118
Query: 149 ISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTR--NQKQP 206
+ P V+E + +GI ++ R+ R L ++++ Y+ K + F L + K
Sbjct: 119 GAAPRVWEMICNGILTRMTDPDRTSRL-GRILFKLAYTYSEKKNEAKAFFLGNELDLKGR 177
Query: 207 SYLVALIDWLWA---------------RIICAILWPLHLLAEK----------------- 234
S+ ++ + +CA L P A++
Sbjct: 178 SFFGTILKGIRMTFEYSFFGPFTLSSISFLCATLIPFEYAAKEIKILLYTIGVIGLLFNS 237
Query: 235 -----LVYKKIQSAI--GISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAA 287
LV KI+ I G K VSGGG+LP +D +G+++ GYG+TE+SPVI+
Sbjct: 238 FTLDLLVLSKIRRDIVGGFLKTSVSGGGALPNRVDRTLNHLGIRLLEGYGMTETSPVISL 297
Query: 288 RRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA------------GSKGIVKVRGSQVMQ 335
RR V+GSVGH + T ++I E NEVL G KGIV G +M+
Sbjct: 298 RRMDKFVIGSVGHILPKTRLQI-RTEKNEVLSEIDENGRFTKGKPGQKGIVFASGPHIMK 356
Query: 336 GYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGEN 395
GY+KNP T AL+ GW+NTGDIG ++ + + L L GRAK+TIVL GEN
Sbjct: 357 GYYKNPDITADALNA-GWMNTGDIGIVSYNRT----------LTLAGRAKETIVLRGGEN 405
Query: 396 VEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI-VHADASELSK 454
VEP+ +E S I Q +VIGQDQ+ GAIIVPD E ++ AK I V ++ L +
Sbjct: 406 VEPVPIEARLQVSKYISQCMVIGQDQKNLGAIIVPDFESLIAWAKENYIPVDSEQELLRR 465
Query: 455 EKTISLLYGELRKWTS-----KCSFQIGPIHVVDEPFTV 488
++ I L E++ + K Q+ P + +PF V
Sbjct: 466 KQVIDLYRSEIKALNNARSGFKSFEQVTPFLFIVKPFEV 504
>gi|410678889|ref|YP_006931291.1| long-chain-fatty-acid CoA ligase [Borrelia afzelii HLJ01]
gi|408536277|gb|AFU74408.1| long-chain-fatty-acid CoA ligase [Borrelia afzelii HLJ01]
Length = 630
Score = 248 bits (633), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 149/424 (35%), Positives = 240/424 (56%), Gaps = 36/424 (8%)
Query: 21 EIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLT 80
+ +++Y + I G RK N A K + S+D+AT +YTSGTTG+PKGVML+
Sbjct: 144 DFEIYTYSDCILFGDNLRKDSEIINIASK------VDSNDMATIIYTSGTTGHPKGVMLS 197
Query: 81 HKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAV--RNLKD 138
H NLL+Q+ S +V + G F+ +LP WH ++R+ Y IF +G+ +++ + R + D
Sbjct: 198 HANLLYQVSSFSLMVDTKVGQIFMCILPIWHSFQRSFSYNIFLKGMVCLFSTIVPRAMLD 257
Query: 139 DLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISF----AYTAFKRIY 194
D++ PHY+ +VP ++ + I K++ R++ I+++F Y A +Y
Sbjct: 258 DIRNINPHYIAAVPRLWIAIKQNIYKEVSKKPFISRIIFHFFIKLAFLSDICYRAVMGLY 317
Query: 195 --EGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGV 251
GF L K+ L IC L+P L L++ KI +G + G+
Sbjct: 318 PDNGFSLFFPMKKILGTFGL--------IC--LFPFKALGNILIFNKINKILGNNFVVGI 367
Query: 252 SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVD 311
+GGGS+P+ + F+ +IG+++ YGLTE+SP +A+ + ++G+ G + T +I D
Sbjct: 368 TGGGSMPVSVVRFFNSIGIELANAYGLTETSPGVASNKHKKVIIGTCGKILPGTVAEIRD 427
Query: 312 AETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRS 371
+ N++ G KGI+ V+G QVM GY+K+ AT + + DG+LNTGDI ++ +
Sbjct: 428 VDGNKLKKPG-KGILFVKGPQVMLGYYKDREATCKIIGSDGFLNTGDIAKLSKDN----- 481
Query: 372 RRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPD 431
V+ + GR KDTIVL+ GENVEP +E S LI + VV+GQDQ+ GA+I+P+
Sbjct: 482 -----VVQIIGREKDTIVLNNGENVEPGPIEIKLEESILIEKAVVVGQDQKFLGALILPN 536
Query: 432 KEEV 435
EE+
Sbjct: 537 FEEI 540
>gi|392405230|ref|YP_006441842.1| AMP-dependent synthetase and ligase [Turneriella parva DSM 21527]
gi|390613184|gb|AFM14336.1| AMP-dependent synthetase and ligase [Turneriella parva DSM 21527]
Length = 634
Score = 248 bits (633), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 150/439 (34%), Positives = 244/439 (55%), Gaps = 39/439 (8%)
Query: 10 KKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSG 69
+K +V P ++ ++P+ + +E+ +L +K I D+ T +YTSG
Sbjct: 151 EKLNVLPRLLHDLPLATDEELKELEALRQK----------------ILQGDLFTIIYTSG 194
Query: 70 TTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELM 129
TTG PKGVML+H N+L+Q+ I+ D+ LS+LP WH+YER Y + G
Sbjct: 195 TTGEPKGVMLSHANMLYQLEIAPKILQMSPRDRILSILPVWHIYERFMLYSVIFSGAHYY 254
Query: 130 YTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTA 189
Y+ ++L +D R +P M S P ++E +Y ++++I + A R + +Y
Sbjct: 255 YSNKKDLMEDFIRAKPTIMASAPRLWEQIYQKLRERIDKTEAFNREL------FDLSYGI 308
Query: 190 FKRIYEGFCLTRNQK----QPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIG 245
+R++ + Q + ++L L + + A L + + + ++++ +G
Sbjct: 309 KQRLHRAQNVVAGQSAETGEKNFLSNLFEKAVSVFSLAGLKGPDVYMDSIFLVRVRAMLG 368
Query: 246 ISKAG-VSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINH 304
G +SGGG+LP+HID F+ AIG+ V GYG+TE+SP+I+ R+P ++G+VG +
Sbjct: 369 GELRGTISGGGALPLHIDEFFNAIGIPVYEGYGMTETSPLISMRQPGKVIMGTVGFVPDR 428
Query: 305 TEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAP 364
T ++I E ++P G G++ V+G VMQGY+KN AT + L ++GW+NTGDIG
Sbjct: 429 TTVEI-RGEDGRIMPPGEPGVIFVKGPGVMQGYYKNGDATLKVL-QNGWMNTGDIGVFT- 485
Query: 365 HHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRP 424
RS G L + GRAKDTIVL +GEN+EP+ +E + LI Q VV+GQDQ+
Sbjct: 486 -----RS----GALSIRGRAKDTIVLRSGENLEPVPMETLLAQHPLIEQAVVVGQDQKNL 536
Query: 425 GAIIVPDKEEVLMAAKRLS 443
G +I PD + +L A ++S
Sbjct: 537 GVLIWPDYDRLLDAGYQVS 555
>gi|343127459|ref|YP_004777390.1| AMP-binding protein [Borrelia bissettii DN127]
gi|342222147|gb|AEL18325.1| AMP-binding enzyme family protein [Borrelia bissettii DN127]
Length = 630
Score = 248 bits (632), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 158/487 (32%), Positives = 267/487 (54%), Gaps = 45/487 (9%)
Query: 20 EEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVML 79
+ +++Y++ I LG RK A K + S+D+AT +YTSGTTG+PKGVML
Sbjct: 143 NDFEIYTYNDCILLGDNLRKNSEIIEIANK------VDSNDMATIIYTSGTTGHPKGVML 196
Query: 80 THKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAV--RNLK 137
+H NLL+Q+ S +V + G F+ +LP WH ++R+ Y IF +G+ +++ + R +
Sbjct: 197 SHANLLYQVSSFSLMVDTQVGQIFMCILPIWHSFQRSFSYNIFLKGMVCLFSTIVPRAML 256
Query: 138 DDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISF----AYTAFKRI 193
DD++ PHY+ +VP ++ + I K++ R++ ++ +F Y +
Sbjct: 257 DDIKNINPHYIAAVPRLWIAIRQNIYKEVSKKPFISRMIFHFFVKSAFLSDICYRVVMGL 316
Query: 194 Y--EGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAG 250
Y GF L K+ ++ L IC L+P L L++ KI +G + G
Sbjct: 317 YPDNGFSLFFPIKKILGILGL--------IC--LFPFKALGNILIFNKINKILGNNFVVG 366
Query: 251 VSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIV 310
++GGGS+P+ F+ +IG+++ YGLTE+SP +A+ + ++G+ G + T +I
Sbjct: 367 ITGGGSMPLSAARFFNSIGIELANAYGLTETSPGVASNKHKKVIIGTCGKILPGTVAEIR 426
Query: 311 DAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGR 370
DA+ N++ G KGI+ V+G QVM GY+K+ AT + + DG+LNTGDI ++ +
Sbjct: 427 DADGNKLKKPG-KGILFVKGPQVMLGYYKDKEATCRIIGPDGFLNTGDIAKLSKDN---- 481
Query: 371 SRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVP 430
V+ + GR KDTIVL+ GENVEP +E S+LI + VV+GQDQ+ GA+I+P
Sbjct: 482 ------VVQIIGREKDTIVLNNGENVEPAPIEIKLEESALIEKAVVVGQDQKFLGALILP 535
Query: 431 DKEEVLMAAKRLSIVHADASE----LSKEKTISLLYGELRKWTSKCSF-----QIGPIHV 481
+ EE+ + + DA+ ++ + + E++K +K + QI +
Sbjct: 536 NFEEINKYLESVGQKIFDANNRRQIIANNIVLKAINDEIKKLINKTNGFKPFEQILKFTL 595
Query: 482 VDEPFTV 488
+++PF V
Sbjct: 596 LEKPFEV 602
>gi|384107950|ref|ZP_10008847.1| Long-chain acyl-CoA synthetase (AMP-forming) [Treponema sp. JC4]
gi|383870334|gb|EID85937.1| Long-chain acyl-CoA synthetase (AMP-forming) [Treponema sp. JC4]
Length = 652
Score = 248 bits (632), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 151/439 (34%), Positives = 234/439 (53%), Gaps = 23/439 (5%)
Query: 22 IPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTH 81
+ VF +++++ G E D+ A + E DD+AT ++TSGTTG PKGVMLTH
Sbjct: 159 LTVFYFEDLMKKGLEIVGESPDAKKAEIEAEMEATSPDDVATMIFTSGTTGTPKGVMLTH 218
Query: 82 KNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYT--AVRNLKDD 139
N + Q+ ++D + + GD ++++LP WHV+ER Y L Y+ A L D
Sbjct: 219 NNYISQLSVIHDFITCKQGDWWMTILPVWHVFERLIQYVAVHMKCGLAYSKPAAPVLLPD 278
Query: 140 LQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCL 199
+ +P ++ VP ++E L SG+ + + + + I Y + G
Sbjct: 279 MAVIRPQWICGVPRLWEALASGVIRTMKKTGGLTLKLFNFFIGAGSLYAKMRDYVFG--- 335
Query: 200 TRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLP 258
N Q L+D + I +LWPLH L + LV++KI++ +G +SGGG+L
Sbjct: 336 --NIPQFKKRCRLLDSIIGFIPWILLWPLHKLGDILVFRKIRAKMGGRINIAISGGGALQ 393
Query: 259 MHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAE----- 313
ID FY AIG+ + GYG++E++PV++ R G VG E++IV E
Sbjct: 394 KDIDDFYRAIGLNLLEGYGMSETAPVVSFRDYRHPRPGVVGVIFPTMEVRIVAEEHGSIV 453
Query: 314 TNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRR 373
+ E L G +G++ +R QVM+GY+K P T++ LD GWLNTGD+G + +
Sbjct: 454 SMEHLGPGRQGLIVLRSPQVMKGYYKRPDLTEKVLDRAGWLNTGDLGMMTLDNE------ 507
Query: 374 CGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 433
+ + GRAKDTIVL GENVEP+ +E A L S+ I I+V GQD++ GA+IVP K+
Sbjct: 508 ----IKITGRAKDTIVLLDGENVEPVIIESALLESNYIESIMVTGQDKKYLGALIVPVKD 563
Query: 434 EVLMAAKRLSIVHADASEL 452
++ A ++ + L
Sbjct: 564 ALIAFASENNLAYTSYENL 582
>gi|386853545|ref|YP_006202830.1| Long-chain-fatty-acid CoA ligase [Borrelia garinii BgVir]
gi|365193579|gb|AEW68477.1| Long-chain-fatty-acid CoA ligase [Borrelia garinii BgVir]
Length = 630
Score = 247 bits (631), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 155/486 (31%), Positives = 262/486 (53%), Gaps = 45/486 (9%)
Query: 21 EIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLT 80
+ +++Y + I G RK + A K + S+D+AT +YTSGTTGNPKGVML+
Sbjct: 144 DFEIYTYGDCISFGDNLRKDSEIIDIASK------VDSNDMATIIYTSGTTGNPKGVMLS 197
Query: 81 HKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAV--RNLKD 138
H N L+Q+ S +V + G F+ +LP WH ++R+ Y IF +G+ +++ + R + D
Sbjct: 198 HANFLYQVSSFSLMVDTQVGQIFMCILPIWHSFQRSFSYNIFLKGMVCLFSTIVPRAMLD 257
Query: 139 DLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIY---- 194
D++ PHY+ +VP ++ + I K++ R++ I+++F RI
Sbjct: 258 DIKNINPHYIAAVPRLWIAIRQNIYKEVSKKPFISRIIFHFFIKLAFLSDICYRIVMGLY 317
Query: 195 --EGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGV 251
GF L K+ + LI L+P L L++ KI +G + G+
Sbjct: 318 PDNGFNLFFPIKKILGIFGLIS----------LFPFKALGNILIFNKINKILGNNFVVGI 367
Query: 252 SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVD 311
+GGGS+P+ + F+ +IG+++ YGLTE+SP +A+ + ++G+ G + T +I D
Sbjct: 368 TGGGSMPLSVARFFNSIGIELANAYGLTETSPGVASNKHKKVIIGTCGKILPGTVAEIRD 427
Query: 312 AETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRS 371
A+ N++ G KGI+ V+G QVM GY+K+ AT + + D +LNTGDI ++ +
Sbjct: 428 ADGNKLKKPG-KGILFVKGPQVMLGYYKDREATCRIIGTDSFLNTGDIAKLSKDN----- 481
Query: 372 RRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPD 431
V+ + GR KDTIVL+ GENVEP +E S LI + +V+GQDQ+ GA+I+P+
Sbjct: 482 -----VVQIIGREKDTIVLNNGENVEPAPIEIKLEESILIEKAIVVGQDQKFLGALILPN 536
Query: 432 KEEVLMAAKRLSIVHADASE----LSKEKTISLLYGELRKWTSKCSF-----QIGPIHVV 482
EE+ + + DA+ +S + + E++K ++ + QI ++
Sbjct: 537 FEEINKYLESVGQKIFDANNRRQVISNNIVLKAINDEIKKLINRTNGFKPFEQILKFTLL 596
Query: 483 DEPFTV 488
++PF V
Sbjct: 597 EKPFEV 602
>gi|418733739|ref|ZP_13290850.1| AMP-binding enzyme [Leptospira interrogans str. UI 12758]
gi|410772920|gb|EKR52952.1| AMP-binding enzyme [Leptospira interrogans str. UI 12758]
Length = 645
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 153/435 (35%), Positives = 236/435 (54%), Gaps = 27/435 (6%)
Query: 5 ILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATY 64
I+L+ +K ++ E+ F + DL + + + H + I +D+AT
Sbjct: 142 IILFDQKGTL-----EDTKSFEIILLNDLIEKGKTWIQNKGKDEFHKRGSAIREEDLATI 196
Query: 65 VYTSGTTGNPKGVMLTHKNLLHQIRSLY-----DIVPAENGDKFLSMLPPWHVYERACGY 119
VYTSGTTG PKGVMLTHKN++ + S ++ P D+ ++ LPPWH+ ER
Sbjct: 197 VYTSGTTGKPKGVMLTHKNIVFNVDSALQGEDLNVYPT---DRSMAYLPPWHIAERLVET 253
Query: 120 FIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARA 179
G +T++ +L DL +P ++SVP V+E+LY+ I ++ SS ++ + A
Sbjct: 254 VCIRAGGAEAFTSISSLSQDLADIKPTLLLSVPRVWESLYNKIHDKVRNSSPVQQALFGA 313
Query: 180 LIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKK 239
I+ Y +K + L + + S +L L + I +LW + +++ L + K
Sbjct: 314 FKEIAITY--YKHLSRLQNLEYSLTEQSTFASLWQKLISFWIVILLWIPNQISQ-LAFNK 370
Query: 240 IQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSV 298
I+ +G K +SG G+LP +ID F+ AIG+ + GYG+TE S + R +G++
Sbjct: 371 IKQGLGGELKFALSGAGALPQYIDTFFNAIGIPILEGYGMTELSGISTRRILGEITVGTL 430
Query: 299 GHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGD 358
G I +IK++D + NE+ G KGI +G VM+GY+K P TK+ L DGWLN+GD
Sbjct: 431 GRCIPGVQIKLMDEKGNEITKPGIKGIAWHKGDHVMKGYYKEPEKTKEILSSDGWLNSGD 490
Query: 359 IGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIG 418
+ + G L GRAKDTIVL GEN+EP +E A +RS I+Q +VIG
Sbjct: 491 L----------LTWTTSGELKYSGRAKDTIVLLGGENLEPEPIEFALVRSRFIQQAMVIG 540
Query: 419 QDQRRPGAIIVPDKE 433
DQ+ GA+IVPD+E
Sbjct: 541 HDQKTLGALIVPDRE 555
>gi|24217154|ref|NP_714637.1| long-chain-fatty-acid--CoA ligase [Leptospira interrogans serovar
Lai str. 56601]
gi|45655657|ref|YP_003466.1| long-chain-fatty-acid--CoA ligase [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|386076113|ref|YP_005990302.1| long-chain-fatty-acid CoA ligase [Leptospira interrogans serovar
Lai str. IPAV]
gi|417759668|ref|ZP_12407702.1| AMP-binding enzyme [Leptospira interrogans str. 2002000624]
gi|417766351|ref|ZP_12414303.1| AMP-binding enzyme [Leptospira interrogans serovar Bulgarica str.
Mallika]
gi|417776506|ref|ZP_12424343.1| AMP-binding enzyme [Leptospira interrogans str. 2002000621]
gi|417786919|ref|ZP_12434604.1| AMP-binding enzyme [Leptospira interrogans str. C10069]
gi|418666198|ref|ZP_13227629.1| AMP-binding enzyme [Leptospira interrogans serovar Pyrogenes str.
2006006960]
gi|418671279|ref|ZP_13232631.1| AMP-binding enzyme [Leptospira interrogans str. 2002000623]
gi|418690921|ref|ZP_13252028.1| AMP-binding enzyme [Leptospira interrogans str. FPW2026]
gi|418725531|ref|ZP_13284149.1| AMP-binding enzyme [Leptospira interrogans str. UI 12621]
gi|421086594|ref|ZP_15547442.1| AMP-binding enzyme [Leptospira santarosai str. HAI1594]
gi|421104017|ref|ZP_15564613.1| AMP-binding enzyme [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|421119509|ref|ZP_15579829.1| AMP-binding enzyme [Leptospira interrogans str. Brem 329]
gi|24202192|gb|AAN51652.1| long-chain-fatty-acid CoA ligase [Leptospira interrogans serovar
Lai str. 56601]
gi|45602628|gb|AAS72103.1| long-chain-fatty-acid--CoA ligase [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|353459775|gb|AER04319.1| long-chain-fatty-acid CoA ligase [Leptospira interrogans serovar
Lai str. IPAV]
gi|400351178|gb|EJP03418.1| AMP-binding enzyme [Leptospira interrogans serovar Bulgarica str.
Mallika]
gi|400359957|gb|EJP15938.1| AMP-binding enzyme [Leptospira interrogans str. FPW2026]
gi|409944416|gb|EKN89999.1| AMP-binding enzyme [Leptospira interrogans str. 2002000624]
gi|409949771|gb|EKO04304.1| AMP-binding enzyme [Leptospira interrogans str. C10069]
gi|409961168|gb|EKO24915.1| AMP-binding enzyme [Leptospira interrogans str. UI 12621]
gi|410347660|gb|EKO98533.1| AMP-binding enzyme [Leptospira interrogans str. Brem 329]
gi|410366498|gb|EKP21890.1| AMP-binding enzyme [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|410430623|gb|EKP74986.1| AMP-binding enzyme [Leptospira santarosai str. HAI1594]
gi|410573715|gb|EKQ36760.1| AMP-binding enzyme [Leptospira interrogans str. 2002000621]
gi|410581540|gb|EKQ49349.1| AMP-binding enzyme [Leptospira interrogans str. 2002000623]
gi|410758145|gb|EKR19744.1| AMP-binding enzyme [Leptospira interrogans serovar Pyrogenes str.
2006006960]
Length = 645
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 153/435 (35%), Positives = 236/435 (54%), Gaps = 27/435 (6%)
Query: 5 ILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATY 64
I+L+ +K ++ E+ F + DL + + + H + I +D+AT
Sbjct: 142 IILFDQKGTL-----EDTKSFEIILLNDLIEKGKTWIQNKGKDEFHKRGSAIREEDLATI 196
Query: 65 VYTSGTTGNPKGVMLTHKNLLHQIRSLY-----DIVPAENGDKFLSMLPPWHVYERACGY 119
VYTSGTTG PKGVMLTHKN++ + S ++ P D+ ++ LPPWH+ ER
Sbjct: 197 VYTSGTTGKPKGVMLTHKNIVFNVDSALQGEDLNVYPT---DRSMAYLPPWHIAERLVET 253
Query: 120 FIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARA 179
G +T++ +L DL +P ++SVP V+E+LY+ I ++ SS ++ + A
Sbjct: 254 VCIRAGGAEAFTSISSLSQDLADIKPTLLLSVPRVWESLYNKIHDKVRNSSPVQQALFGA 313
Query: 180 LIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKK 239
I+ Y +K + L + + S +L L + I +LW + +++ L + K
Sbjct: 314 FKEIAITY--YKHLSRLQNLEYSLTEQSTFASLWQKLISFWIVILLWIPNQISQ-LAFNK 370
Query: 240 IQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSV 298
I+ +G K +SG G+LP +ID F+ AIG+ + GYG+TE S + R +G++
Sbjct: 371 IKQGLGGELKFALSGAGALPQYIDTFFNAIGIPILEGYGMTELSGISTRRILGEITVGTL 430
Query: 299 GHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGD 358
G I +IK++D + NE+ G KGI +G VM+GY+K P TK+ L DGWLN+GD
Sbjct: 431 GRCIPGVQIKLMDEKGNEITKPGIKGIAWHKGDHVMKGYYKEPEKTKEILSSDGWLNSGD 490
Query: 359 IGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIG 418
+ + G L GRAKDTIVL GEN+EP +E A +RS I+Q +VIG
Sbjct: 491 L----------LTWTTSGELKYSGRAKDTIVLLGGENLEPEPIEFALVRSRFIQQAMVIG 540
Query: 419 QDQRRPGAIIVPDKE 433
DQ+ GA+IVPD+E
Sbjct: 541 HDQKTLGALIVPDRE 555
>gi|417772634|ref|ZP_12420522.1| AMP-binding enzyme [Leptospira interrogans serovar Pomona str.
Pomona]
gi|418681870|ref|ZP_13243092.1| AMP-binding enzyme [Leptospira interrogans serovar Pomona str.
Kennewicki LC82-25]
gi|418704770|ref|ZP_13265637.1| AMP-binding enzyme [Leptospira interrogans serovar Hebdomadis str.
R499]
gi|418712874|ref|ZP_13273603.1| AMP-binding enzyme [Leptospira interrogans str. UI 08452]
gi|421115985|ref|ZP_15576378.1| AMP-binding enzyme [Leptospira interrogans serovar Canicola str.
Fiocruz LV133]
gi|400326387|gb|EJO78654.1| AMP-binding enzyme [Leptospira interrogans serovar Pomona str.
Kennewicki LC82-25]
gi|409945311|gb|EKN95327.1| AMP-binding enzyme [Leptospira interrogans serovar Pomona str.
Pomona]
gi|410012481|gb|EKO70579.1| AMP-binding enzyme [Leptospira interrogans serovar Canicola str.
Fiocruz LV133]
gi|410765383|gb|EKR36083.1| AMP-binding enzyme [Leptospira interrogans serovar Hebdomadis str.
R499]
gi|410790643|gb|EKR84335.1| AMP-binding enzyme [Leptospira interrogans str. UI 08452]
gi|455669836|gb|EMF34894.1| AMP-binding enzyme [Leptospira interrogans serovar Pomona str. Fox
32256]
Length = 645
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 154/436 (35%), Positives = 236/436 (54%), Gaps = 29/436 (6%)
Query: 5 ILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATY 64
I+L+ +K ++ E+ F + DL + + + H + I +D+AT
Sbjct: 142 IILFDQKGTL-----EDTKPFEIILLNDLIEKGKTWIQNKGKDEFHKRGSAIREEDLATI 196
Query: 65 VYTSGTTGNPKGVMLTHKNLLHQIRSLY-----DIVPAENGDKFLSMLPPWHVYERACGY 119
VYTSGTTG PKGVMLTHKN++ + S ++ P D+ ++ LPPWH+ ER
Sbjct: 197 VYTSGTTGKPKGVMLTHKNIVFNVDSALQGEDLNVYPT---DRSMAYLPPWHIAERLVET 253
Query: 120 FIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARA 179
G +T++ +L DL +P ++SVP V+E+LY+ I ++ SS ++ + A
Sbjct: 254 VCIRAGGAEAFTSISSLSQDLADIKPTLLLSVPRVWESLYNKIHDKVRNSSPVQQALFGA 313
Query: 180 LIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKK 239
I+ Y +K + L + + S +L L + I +LW + +++ L + K
Sbjct: 314 FKEIAITY--YKHLSRLQNLEYSLTEQSTFASLWQKLISFWIVILLWIPNQISQ-LAFNK 370
Query: 240 IQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSV 298
I+ +G K +SG G+LP +ID F+ AIG+ + GYG+TE S + R +G++
Sbjct: 371 IKQGLGGELKFALSGAGALPQYIDTFFNAIGIPILEGYGMTELSGISTRRILGEITVGTL 430
Query: 299 GHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGD 358
G I +IK++D + NE+ G KGI +G VM+GY+K P TK+ L DGWLN+GD
Sbjct: 431 GRCIPGVQIKLMDEKGNEITKPGIKGIAWHKGDHVMKGYYKEPEKTKEILSSDGWLNSGD 490
Query: 359 -IGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 417
+ W G L GRAKDTIVL GEN+EP +E A +RS I+Q +VI
Sbjct: 491 LLTWTT-----------SGELKYSGRAKDTIVLLGGENLEPEPIEFALVRSRFIQQAMVI 539
Query: 418 GQDQRRPGAIIVPDKE 433
G DQ+ GA+IVPD+E
Sbjct: 540 GHDQKTLGALIVPDRE 555
>gi|216263809|ref|ZP_03435803.1| putative AMP-binding enzyme [Borrelia afzelii ACA-1]
gi|215979853|gb|EEC20675.1| putative AMP-binding enzyme [Borrelia afzelii ACA-1]
Length = 630
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 149/424 (35%), Positives = 240/424 (56%), Gaps = 36/424 (8%)
Query: 21 EIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLT 80
+ +++Y + I G RK N A K + S+D+AT +YTSGTTG+PKGVML+
Sbjct: 144 DFEIYTYSDCILFGDNLRKDSEIINIASK------VDSNDMATIIYTSGTTGHPKGVMLS 197
Query: 81 HKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAV--RNLKD 138
H NLL+Q+ S +V + G F+ +LP WH ++R+ Y IF +G+ +++ + R + D
Sbjct: 198 HANLLYQVSSFSLMVDTKVGQIFMCILPIWHSFQRSFSYNIFLKGMVCLFSTIVPRAMLD 257
Query: 139 DLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISF----AYTAFKRIY 194
D++ PHY+ +VP ++ + I K++ R++ I+++F Y A +Y
Sbjct: 258 DIRNINPHYIAAVPRLWIAIKQNIYKEVSKKPFISRIIFHFFIKLAFLSDICYRAVMGLY 317
Query: 195 --EGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGV 251
GF L K+ L IC L+P L L++ KI +G + G+
Sbjct: 318 PDNGFSLFFPIKKILGTFGL--------IC--LFPFKALGNILIFNKINKILGNNFVVGI 367
Query: 252 SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVD 311
+GGGS+P+ + F+ +IG+++ YGLTE+SP +A+ + ++G+ G + T +I D
Sbjct: 368 TGGGSMPVSVVRFFNSIGIELANAYGLTETSPGVASNKHKRVIIGTCGKILPGTVAEIRD 427
Query: 312 AETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRS 371
+ N++ G KGI+ V+G QVM GY+K+ AT + + DG+LNTGDI ++ +
Sbjct: 428 VDGNKLKKPG-KGILFVKGPQVMLGYYKDREATCKIIGSDGFLNTGDIAKLSKDN----- 481
Query: 372 RRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPD 431
V+ + GR KDTIVL+ GENVEP +E S LI + VV+GQDQ+ GA+I+P+
Sbjct: 482 -----VVQIIGREKDTIVLNNGENVEPGPIEIKLEESILIEKAVVVGQDQKFLGALILPN 536
Query: 432 KEEV 435
EE+
Sbjct: 537 FEEI 540
>gi|418699116|ref|ZP_13260083.1| AMP-binding enzyme [Leptospira interrogans serovar Bataviae str.
L1111]
gi|421128285|ref|ZP_15588500.1| AMP-binding enzyme [Leptospira interrogans serovar Grippotyphosa
str. 2006006986]
gi|421135813|ref|ZP_15595933.1| AMP-binding enzyme [Leptospira interrogans serovar Grippotyphosa
str. Andaman]
gi|410020118|gb|EKO86923.1| AMP-binding enzyme [Leptospira interrogans serovar Grippotyphosa
str. Andaman]
gi|410434010|gb|EKP83151.1| AMP-binding enzyme [Leptospira interrogans serovar Grippotyphosa
str. 2006006986]
gi|410761976|gb|EKR28147.1| AMP-binding enzyme [Leptospira interrogans serovar Bataviae str.
L1111]
gi|455793442|gb|EMF45140.1| AMP-binding enzyme [Leptospira interrogans serovar Lora str. TE
1992]
Length = 645
Score = 246 bits (629), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 154/436 (35%), Positives = 236/436 (54%), Gaps = 29/436 (6%)
Query: 5 ILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATY 64
I+L+ +K ++ E+ F + DL + + + H + I +D+AT
Sbjct: 142 IILFDQKGTL-----EDTKPFEIILLNDLIEKGKTWIQNKGKDEFHKRGSAIREEDLATI 196
Query: 65 VYTSGTTGNPKGVMLTHKNLLHQIRSLY-----DIVPAENGDKFLSMLPPWHVYERACGY 119
VYTSGTTG PKGVMLTHKN++ + S ++ P D+ ++ LPPWH+ ER
Sbjct: 197 VYTSGTTGKPKGVMLTHKNIVFNVDSALQGEDLNVYPT---DRSMAYLPPWHIAERLVET 253
Query: 120 FIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARA 179
G +T++ +L DL +P ++SVP V+E+LY+ I ++ SS ++ + A
Sbjct: 254 VCIRAGGAEAFTSISSLSQDLADIKPTLLLSVPRVWESLYNKIHDKVRNSSPVQQALFGA 313
Query: 180 LIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKK 239
I+ Y +K + L + + S +L L + I +LW + +++ L + K
Sbjct: 314 FKEIAITY--YKHLSRLQNLEYSLTEQSTFASLWQKLISFWIVILLWIPNQISQ-LAFNK 370
Query: 240 IQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSV 298
I+ +G K +SG G+LP +ID F+ AIG+ + GYG+TE S + R +G++
Sbjct: 371 IKQGLGGELKFALSGAGALPQYIDTFFNAIGIPILEGYGMTELSGISTRRILGEITVGTL 430
Query: 299 GHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGD 358
G I +IK++D + NE+ G KGI +G VM+GY+K P TK+ L DGWLN+GD
Sbjct: 431 GRCIPGVQIKLMDEKGNEITKPGIKGIAWHKGDHVMKGYYKEPEKTKEILSSDGWLNSGD 490
Query: 359 -IGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 417
+ W G L GRAKDTIVL GEN+EP +E A +RS I+Q +VI
Sbjct: 491 LLTWTT-----------SGELKYSGRAKDTIVLLGGENLEPEPIEFALVRSRFIQQAMVI 539
Query: 418 GQDQRRPGAIIVPDKE 433
G DQ+ GA+IVPD+E
Sbjct: 540 GHDQKTLGALIVPDRE 555
>gi|408670769|ref|YP_006870840.1| long-chain-fatty-acid CoA ligase [Borrelia garinii NMJW1]
gi|407240591|gb|AFT83474.1| long-chain-fatty-acid CoA ligase [Borrelia garinii NMJW1]
Length = 630
Score = 246 bits (629), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 155/486 (31%), Positives = 262/486 (53%), Gaps = 45/486 (9%)
Query: 21 EIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLT 80
+ +++Y + I G RK + A K + S+D+AT +YTSGTTGNPKGVML+
Sbjct: 144 DFEIYTYGDCISFGDNLRKDSEIIDIASK------VDSNDMATIIYTSGTTGNPKGVMLS 197
Query: 81 HKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAV--RNLKD 138
H N L+Q+ S +V + G F+ +LP WH ++R+ Y IF +G+ +++ + R + D
Sbjct: 198 HANFLYQVSSFSLMVDTQVGQIFMCILPIWHSFQRSFSYNIFLKGMVCLFSTIVPRAMLD 257
Query: 139 DLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIY---- 194
D++ PHY+ +VP ++ + I K++ R++ I+++F RI
Sbjct: 258 DIKSINPHYIAAVPRLWIAIRQNIYKEVSKKPFISRIIFHFFIKLAFLSDICYRIVMGLY 317
Query: 195 --EGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGV 251
GF L K+ + LI L+P L L++ KI +G + G+
Sbjct: 318 PDNGFNLFFPIKKILGIFGLIS----------LFPFKALGNILIFNKINKILGNNFVVGI 367
Query: 252 SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVD 311
+GGGS+P+ + F+ +IG+++ YGLTE+SP +A+ + ++G+ G + T +I D
Sbjct: 368 TGGGSMPLSVARFFNSIGIELANAYGLTETSPGVASNKHKKVIIGTCGKILPGTVAEIRD 427
Query: 312 AETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRS 371
A+ N++ G KGI+ V+G QVM GY+K+ AT + + D +LNTGDI ++ +
Sbjct: 428 ADGNKLKKPG-KGILFVKGPQVMLGYYKDREATCRIIGADSFLNTGDIAKLSKDN----- 481
Query: 372 RRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPD 431
V+ + GR KDTIVL+ GENVEP +E S LI + +V+GQDQ+ GA+I+P+
Sbjct: 482 -----VVQIIGREKDTIVLNNGENVEPAPIEIKLEESILIEKAIVVGQDQKFLGALILPN 536
Query: 432 KEEVLMAAKRLSIVHADASE----LSKEKTISLLYGELRKWTSKCSF-----QIGPIHVV 482
EE+ + + DA+ +S + + E++K ++ + QI ++
Sbjct: 537 FEEINKYLESVGQKIFDANNRRQVISNNIVLKAINDEIKKLINRTNGFKPFEQILKFTLL 596
Query: 483 DEPFTV 488
++PF V
Sbjct: 597 EKPFEV 602
>gi|418696753|ref|ZP_13257757.1| AMP-binding enzyme [Leptospira kirschneri str. H1]
gi|421105762|ref|ZP_15566340.1| AMP-binding enzyme [Leptospira kirschneri str. H2]
gi|409955363|gb|EKO14300.1| AMP-binding enzyme [Leptospira kirschneri str. H1]
gi|410009156|gb|EKO62814.1| AMP-binding enzyme [Leptospira kirschneri str. H2]
Length = 645
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 151/422 (35%), Positives = 228/422 (54%), Gaps = 24/422 (5%)
Query: 19 VEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVM 78
+E+ F + DL + + + H + I +D+AT VYTSGTTG PKGVM
Sbjct: 151 LEDTESFEIILLNDLIEKGKTWIQNKGKDEFHKRGSAIREEDLATIVYTSGTTGKPKGVM 210
Query: 79 LTHKNLLHQIRSLY-----DIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAV 133
LTHKN++ + S ++ P D+ ++ LPPWH+ ER G +T+V
Sbjct: 211 LTHKNIVFNVDSALQGEDLNVYPT---DRSMAYLPPWHIAERLVETVCIRAGGAEAFTSV 267
Query: 134 RNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRI 193
L DL +P ++SVP V+E+LY+ I ++ SS ++ + A I+ Y +K +
Sbjct: 268 STLSQDLADIKPTLLLSVPRVWESLYNKIHDKVRNSSPVQQALFGAFKEIAITY--YKHL 325
Query: 194 YEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVS 252
L + + S +L L + I +LW + +++ L + KI+ +G + +S
Sbjct: 326 SRLQDLEYSLVEQSTFASLWQKLISLWIVILLWIPNQISQ-LAFNKIKQGLGGELRFALS 384
Query: 253 GGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDA 312
G G+LP +ID F+ AIG+ + GYG+TE S + R +G++G I +IK++D
Sbjct: 385 GAGALPQYIDTFFNAIGIPILEGYGMTELSGISTRRIFGEITVGTLGRCIPGVQIKLMDE 444
Query: 313 ETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGD-IGWIAPHHSRGRS 371
+ NE+ G KGI +G VM+GY+K P TK+ L DGWLN+GD + W
Sbjct: 445 KGNEITKPGIKGIAWHKGDHVMKGYYKEPEKTKEILSSDGWLNSGDLLAWT--------- 495
Query: 372 RRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPD 431
G L GRAKDTIVL GEN+EP +E A +RS I+Q +V+G DQ+ GA+IVPD
Sbjct: 496 --TSGELKYSGRAKDTIVLLGGENLEPEPIEFALVRSRFIQQAMVVGHDQKTLGALIVPD 553
Query: 432 KE 433
KE
Sbjct: 554 KE 555
>gi|421131450|ref|ZP_15591632.1| AMP-binding enzyme [Leptospira kirschneri str. 2008720114]
gi|410357233|gb|EKP04500.1| AMP-binding enzyme [Leptospira kirschneri str. 2008720114]
Length = 645
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 150/422 (35%), Positives = 228/422 (54%), Gaps = 24/422 (5%)
Query: 19 VEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVM 78
+E+ F + DL + + + H + I +D+AT VYTSGTTG PKGVM
Sbjct: 151 LEDTESFEIILLNDLIEKGKTWIQNKGKDEFHKRGSAIREEDLATIVYTSGTTGKPKGVM 210
Query: 79 LTHKNLLHQIRSLY-----DIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAV 133
LTHKN++ + S ++ P D+ ++ LPPWH+ ER G +T++
Sbjct: 211 LTHKNIVFNVDSALQGEDLNVYPT---DRSMAYLPPWHIAERLVETVCIRAGGAEAFTSI 267
Query: 134 RNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRI 193
L DL +P ++SVP V+E+LY+ I ++ SS ++ + A I+ Y +K +
Sbjct: 268 STLSQDLADIKPTLLLSVPRVWESLYNKIHDKVRNSSPVQQALFGAFKEIAITY--YKHL 325
Query: 194 YEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVS 252
L + + S +L L + I +LW + +++ L + KI+ +G + +S
Sbjct: 326 SRLQDLEYSLMEQSTFASLWQKLISLWIVILLWIPNQISQ-LAFNKIKQGLGGELRFALS 384
Query: 253 GGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDA 312
G G+LP +ID F+ AIG+ + GYG+TE S + R +G++G I +IK++D
Sbjct: 385 GAGALPQYIDTFFNAIGIPILEGYGMTELSGISTRRIFGEITVGTLGRCIPGVQIKLMDE 444
Query: 313 ETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGD-IGWIAPHHSRGRS 371
+ NE+ G KGI +G VM+GY+K P TK+ L DGWLN+GD + W
Sbjct: 445 KGNEITKPGIKGIAWHKGDHVMKGYYKEPEKTKEILSSDGWLNSGDLLAWT--------- 495
Query: 372 RRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPD 431
G L GRAKDTIVL GEN+EP +E A +RS I+Q +V+G DQ+ GA+IVPD
Sbjct: 496 --TSGELKYSGRAKDTIVLLGGENLEPEPIEFALVRSRFIQQAMVVGHDQKTLGALIVPD 553
Query: 432 KE 433
KE
Sbjct: 554 KE 555
>gi|418710506|ref|ZP_13271276.1| AMP-binding enzyme [Leptospira interrogans serovar Grippotyphosa
str. UI 08368]
gi|410769095|gb|EKR44338.1| AMP-binding enzyme [Leptospira interrogans serovar Grippotyphosa
str. UI 08368]
gi|456966688|gb|EMG08222.1| AMP-binding enzyme [Leptospira interrogans serovar Grippotyphosa
str. LT2186]
Length = 645
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 149/409 (36%), Positives = 224/409 (54%), Gaps = 24/409 (5%)
Query: 32 DLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSL 91
DL + + + H + I +D+AT VYTSGTTG PKGVMLTHKN++ + S
Sbjct: 164 DLIEKGKTWIQNKGKDEFHKRGSAIREEDLATIVYTSGTTGKPKGVMLTHKNIVFNVDSA 223
Query: 92 Y-----DIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPH 146
++ P D+ ++ LPPWH+ ER G +T++ +L DL +P
Sbjct: 224 LQGEDLNVYPT---DRSMAYLPPWHIAERLVETVCIRAGGAEAFTSISSLSQDLADIKPT 280
Query: 147 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 206
++SVP V+E+LY+ I ++ SS ++ + A I+ Y +K + L + +
Sbjct: 281 LLLSVPRVWESLYNKIHDKVRNSSPVQQALFGAFKEIAITY--YKHLSRLQNLEYSLTEQ 338
Query: 207 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFY 265
S +L L + I +LW + +++ L + KI+ +G K +SG G+LP +ID F+
Sbjct: 339 STFASLWQKLISFWIVILLWIPNQISQ-LAFNKIKQGLGGELKFALSGAGALPQYIDTFF 397
Query: 266 EAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGI 325
AIG+ + GYG+TE S + R +G++G I +IK++D + NE+ G KGI
Sbjct: 398 NAIGIPILEGYGMTELSGISTRRILGEITVGTLGRCIPGVQIKLMDEKGNEITKPGIKGI 457
Query: 326 VKVRGSQVMQGYFKNPSATKQALDEDGWLNTGD-IGWIAPHHSRGRSRRCGGVLVLEGRA 384
+G VM+GY+K P TK+ L DGWLN+GD + W G L GRA
Sbjct: 458 AWHKGDHVMKGYYKEPEKTKEILSSDGWLNSGDLLTWTT-----------SGELKYSGRA 506
Query: 385 KDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 433
KDTIVL GEN+EP +E A +RS I+Q +VIG DQ+ GA+IVPD+E
Sbjct: 507 KDTIVLLGGENLEPEPIEFALVRSRFIQQAMVIGHDQKTLGALIVPDRE 555
>gi|111114960|ref|YP_709578.1| long-chain-fatty-acid CoA ligase [Borrelia afzelii PKo]
gi|384206637|ref|YP_005592358.1| AMP-binding protein [Borrelia afzelii PKo]
gi|110890234|gb|ABH01402.1| long-chain-fatty-acid CoA ligase [Borrelia afzelii PKo]
gi|342856520|gb|AEL69368.1| AMP-binding enzyme family protein [Borrelia afzelii PKo]
Length = 630
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 149/424 (35%), Positives = 240/424 (56%), Gaps = 36/424 (8%)
Query: 21 EIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLT 80
+ +++Y + I G RK N A K + S+D+AT +YTSGTTG+PKGVML+
Sbjct: 144 DFEIYTYSDCILFGDNLRKDSEIINIASK------VDSNDMATIIYTSGTTGHPKGVMLS 197
Query: 81 HKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAV--RNLKD 138
H NLL+Q+ S +V + G F+ +LP WH ++R+ Y IF +G+ +++ + R + D
Sbjct: 198 HANLLYQVSSFSLMVDTKVGQIFMCILPIWHSFQRSFSYNIFLKGMVCLFSTIVPRAMLD 257
Query: 139 DLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISF----AYTAFKRIY 194
D++ PHY+ +VP ++ + I K++ R++ I+++F Y A +Y
Sbjct: 258 DIRNINPHYIAAVPRLWIAIKQNIYKEVSKKPFISRIIFHFFIKLAFLSDICYRAVMGLY 317
Query: 195 --EGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGV 251
GF L K+ L IC L+P L L++ KI +G + G+
Sbjct: 318 PDNGFSLFFPIKKILGTFGL--------IC--LFPFKALGNILIFNKINKILGNNFVVGI 367
Query: 252 SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVD 311
+GGGS+P+ + F+ +IG+++ YGLTE+SP +A+ + ++G+ G + T +I D
Sbjct: 368 TGGGSMPVPVVRFFNSIGIELANAYGLTETSPGVASNKHKRVIIGTCGKILPGTVAEIRD 427
Query: 312 AETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRS 371
+ N++ G KGI+ V+G QVM GY+K+ AT + + DG+LNTGDI ++ +
Sbjct: 428 VDGNKLKKPG-KGILFVKGPQVMLGYYKDREATCKIIGSDGFLNTGDIAKLSKDN----- 481
Query: 372 RRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPD 431
V+ + GR KDTIVL+ GENVEP +E S LI + VV+GQDQ+ GA+I+P+
Sbjct: 482 -----VVQIIGREKDTIVLNNGENVEPGPIEIKLEESILIEKAVVVGQDQKFLGALILPN 536
Query: 432 KEEV 435
EE+
Sbjct: 537 FEEI 540
>gi|359689681|ref|ZP_09259682.1| long-chain-fatty-acid--CoA ligase [Leptospira licerasiae serovar
Varillal str. MMD0835]
gi|418749980|ref|ZP_13306268.1| AMP-binding enzyme [Leptospira licerasiae str. MMD4847]
gi|418759027|ref|ZP_13315207.1| AMP-binding enzyme [Leptospira licerasiae serovar Varillal str. VAR
010]
gi|384113518|gb|EID99782.1| AMP-binding enzyme [Leptospira licerasiae serovar Varillal str. VAR
010]
gi|404274865|gb|EJZ42183.1| AMP-binding enzyme [Leptospira licerasiae str. MMD4847]
Length = 637
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 162/422 (38%), Positives = 242/422 (57%), Gaps = 43/422 (10%)
Query: 29 EIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI 88
+++ G+E R + + + I +D+ T +YT+GTTG PKGV LTHKN++ QI
Sbjct: 150 DLVQRGKELR----EKGNREMENRISQIQEEDLFTLIYTAGTTGRPKGVPLTHKNIMSQI 205
Query: 89 RSLYDIVPAENGDKFLSMLPPWHVYER----ACGYFIFSRGIELMYTAVRNLKDDLQRYQ 144
+ + A G++ LS+LP WH +ER C YF G Y++VR LK+DL++ +
Sbjct: 206 NRIPIKLAA--GERILSILPVWHSFERMFEMVCIYF----GAGTYYSSVRTLKEDLKKVK 259
Query: 145 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGF---CLTR 201
P +M S P ++E++Y GI + SS+ ++ + A + S + KR + GF LT
Sbjct: 260 PTFMASAPRLWESVYQGIYATVAKSSSVKQSLFHAALFFSSNIESAKR-WLGFRELDLTG 318
Query: 202 NQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMH 260
S V + L + I I+ P LL + +V KKI+ A G K VSGGG+LP+H
Sbjct: 319 RSAIVSLFVGIFKVL--QYILNII-PATLL-DLIVLKKIRQATGGRLKGTVSGGGALPIH 374
Query: 261 IDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVL-- 318
+D F+ AIG++V GYGLTE+SPVI+ R V+G+VG T +++VD T+++L
Sbjct: 375 VDKFFNAIGIQVLEGYGLTETSPVISVRILNEAVMGTVGPLYKGTSLRVVDPNTSKILWT 434
Query: 319 -----PAG--SKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRS 371
P G KG + V+G QVM GY+ +P T++ ++ DGW NTGD+G + +
Sbjct: 435 TEEGGPKGYAVKGEIHVKGDQVMSGYYHDPENTRKVMN-DGWFNTGDLGMMTYND----- 488
Query: 372 RRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPD 431
C L + GR K+TIVL GENVEP+ +E +S I Q +VIGQDQ+ A+IVP+
Sbjct: 489 --C---LKIVGRTKETIVLLGGENVEPVPIENILSQSEFILQCMVIGQDQKYLSALIVPN 543
Query: 432 KE 433
E
Sbjct: 544 PE 545
>gi|119953377|ref|YP_945586.1| long-chain-fatty-acid--CoA ligase [Borrelia turicatae 91E135]
gi|119862148|gb|AAX17916.1| long-chain-fatty-acid--CoA ligase [Borrelia turicatae 91E135]
Length = 643
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 158/460 (34%), Positives = 246/460 (53%), Gaps = 29/460 (6%)
Query: 17 DIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKG 76
D + I + SY +++ LG + K N + E + DIAT +YTSGTTG PKG
Sbjct: 145 DKLGNITIISYKKLLSLGYDYLK----DNPKMFDSELEKVSGKDIATIIYTSGTTGLPKG 200
Query: 77 VMLTHKNLLHQIRSLYDIVPA-ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN 135
V+L H++ + Q+ + D +P + G +S+LP WH +ER C Y + G+ + Y+
Sbjct: 201 VVLRHESFIFQVDRIGDYLPTIKPGKIMISILPLWHSFERTCEYIVALNGMAIAYSKPIG 260
Query: 136 --LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRI 193
L D PH +ISVP ++E + GI K++ + S +R + ++I Y K
Sbjct: 261 PVLLKDFAALNPHAIISVPRIWEGIRIGIMKRV-SESFFKRFLFNFFLKIGILYIKLKEK 319
Query: 194 YEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVS 252
+ G L K+ ++LV++ + + P L LV++KI+ A+G + GVS
Sbjct: 320 FLG--LVPVYKRSNFLVSIFIKVACLTGLIFILPFKFLGHVLVFRKIKKALGKRFEFGVS 377
Query: 253 GGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDA 312
GGG+L ++D F++A+G+ V GYGLTE+ PV++ RR V +VG E ++V
Sbjct: 378 GGGALVNYVDYFFKAVGIMVLEGYGLTETGPVLSVRRFKSPVANTVGPLFPDIEYRVVGN 437
Query: 313 ETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSR 372
+ N + P G KG + VR QVM GYFK+ + T++ L DGW TGD+ ++
Sbjct: 438 DGNFLSP-GEKGELWVRSPQVMSGYFKDDTTTREVLTRDGWFKTGDLVCATINNE----- 491
Query: 373 RCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDK 432
+ + GR+KDTIVL GEN+EP +E A +S I +VV+GQDQ+ GAIIVP+
Sbjct: 492 -----ISIVGRSKDTIVLRGGENIEPESIERALSKSLFIENVVVVGQDQKFLGAIIVPNF 546
Query: 433 EEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSKC 472
E + A I+ +L ++++ LY SKC
Sbjct: 547 EVLEKWAGSNEIIFDSHDDLLSNESVNKLY-------SKC 579
>gi|418679673|ref|ZP_13240934.1| AMP-binding enzyme [Leptospira kirschneri serovar Grippotyphosa
str. RM52]
gi|418684543|ref|ZP_13245727.1| AMP-binding enzyme [Leptospira kirschneri serovar Grippotyphosa
str. Moskva]
gi|418740250|ref|ZP_13296628.1| AMP-binding enzyme [Leptospira kirschneri serovar Valbuzzi str.
200702274]
gi|421088000|ref|ZP_15548829.1| AMP-binding enzyme [Leptospira kirschneri str. 200802841]
gi|400320115|gb|EJO67988.1| AMP-binding enzyme [Leptospira kirschneri serovar Grippotyphosa
str. RM52]
gi|410003256|gb|EKO53701.1| AMP-binding enzyme [Leptospira kirschneri str. 200802841]
gi|410740743|gb|EKQ85457.1| AMP-binding enzyme [Leptospira kirschneri serovar Grippotyphosa
str. Moskva]
gi|410752254|gb|EKR09229.1| AMP-binding enzyme [Leptospira kirschneri serovar Valbuzzi str.
200702274]
Length = 645
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 150/422 (35%), Positives = 228/422 (54%), Gaps = 24/422 (5%)
Query: 19 VEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVM 78
+E+ F + DL + + + H + I +D+AT VYTSGTTG PKGVM
Sbjct: 151 LEDTESFEIILLNDLIEKGKTWIQNKGKDEFHKRGSAIREEDLATIVYTSGTTGKPKGVM 210
Query: 79 LTHKNLLHQIRSLY-----DIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAV 133
LTHKN++ + S ++ P D+ ++ LPPWH+ ER G +T++
Sbjct: 211 LTHKNIVFNVDSALQGEDLNVYPT---DRSMAYLPPWHIAERLVETVCIRAGGAEAFTSI 267
Query: 134 RNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRI 193
L DL +P ++SVP V+E+LY+ I ++ SS ++ + A I+ Y +K +
Sbjct: 268 STLSQDLADIKPTLLLSVPRVWESLYNKIHDKVRNSSPVQQALFGAFKEIAITY--YKHL 325
Query: 194 YEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVS 252
L + + S +L L + I +LW + +++ L + KI+ +G + +S
Sbjct: 326 SRLQDLEYSLVEQSTFASLWQKLISLWIVILLWIPNQISQ-LAFNKIKQGLGGELRFALS 384
Query: 253 GGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDA 312
G G+LP +ID F+ AIG+ + GYG+TE S + R +G++G I +IK++D
Sbjct: 385 GAGALPQYIDTFFNAIGIPILEGYGMTELSGISTRRIFGEITVGTLGRCIPGVQIKLMDE 444
Query: 313 ETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGD-IGWIAPHHSRGRS 371
+ NE+ G KGI +G VM+GY+K P TK+ L DGWLN+GD + W
Sbjct: 445 KGNEITKPGIKGIAWHKGDHVMKGYYKEPEKTKEILSSDGWLNSGDLLAWT--------- 495
Query: 372 RRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPD 431
G L GRAKDTIVL GEN+EP +E A +RS I+Q +V+G DQ+ GA+IVPD
Sbjct: 496 --TSGELKYSGRAKDTIVLLGGENLEPEPIEFALVRSRFIQQAMVVGHDQKTLGALIVPD 553
Query: 432 KE 433
KE
Sbjct: 554 KE 555
>gi|381181399|ref|ZP_09890233.1| AMP-dependent synthetase and ligase [Treponema saccharophilum DSM
2985]
gi|380766619|gb|EIC00624.1| AMP-dependent synthetase and ligase [Treponema saccharophilum DSM
2985]
Length = 652
Score = 245 bits (625), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 149/419 (35%), Positives = 227/419 (54%), Gaps = 26/419 (6%)
Query: 54 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVP-AENGDKFLSMLPPWHV 112
+ I DD+AT ++TSGTTG PKGV LTH N + Q + ++ + GD +L++LP WH
Sbjct: 190 DEISPDDVATIIFTSGTTGLPKGVQLTHDNYIAQCEVAHSVLGLMQPGDIWLTVLPIWHS 249
Query: 113 YERACGYFIFSRGIELMYTA--VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSS 170
+ERA Y + + Y+ + D+ QP +M VP ++E + G+ +++ S
Sbjct: 250 FERAFCYMVVALEGGFAYSKPIASVMLQDMNLIQPQWMNVVPRLFEAVAQGLFREVKKQS 309
Query: 171 AARRVVARALIRISFAYTAFKRIYEGF-CLTRNQKQPSYLVALIDWLWARIICAILWPLH 229
++ I + Y K G C R + ++D LW + +LWPLH
Sbjct: 310 GMQQFFFHNAIIVGKMYYKMKERVLGLRCRYR------WYPRVLDVLWGIVPFVLLWPLH 363
Query: 230 LLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAAR 288
++ E +YKK+++ G + +A +SGGG+L + FY AIG + GYG+TE +PVI+ R
Sbjct: 364 MIGEVTLYKKLRARFGGNFRAVISGGGALQPGTEAFYHAIGFNLLEGYGMTECAPVISVR 423
Query: 289 RPTCNVLGSVGHPINHTEIKIV-----DAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSA 343
+VG ++KIV E+ E L G +GI+ VRG QVM+GY+K P
Sbjct: 424 NSKKPRSNNVGWVFPSFDVKIVAEKDGKVESGEPLKPGRRGIIMVRGRQVMKGYYKRPDL 483
Query: 344 TKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEE 403
T+ +D +GWLNTGD+G I+ L + GR KDTIVL GEN+EP +E+
Sbjct: 484 TEGVVDSEGWLNTGDLGMISYDEE----------LKIVGRTKDTIVLLGGENIEPQVIEK 533
Query: 404 AALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLY 462
A S I + VV+GQD+R GA+IVPD+ VL A+ +I++ + L + I L+
Sbjct: 534 AVNSSPYIERTVVVGQDKRYLGALIVPDQHSVLSYAEENNILYDNYEALLETNEIQNLF 592
>gi|408793900|ref|ZP_11205505.1| AMP-binding enzyme [Leptospira meyeri serovar Hardjo str. Went 5]
gi|408461135|gb|EKJ84865.1| AMP-binding enzyme [Leptospira meyeri serovar Hardjo str. Went 5]
Length = 671
Score = 245 bits (625), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 147/437 (33%), Positives = 242/437 (55%), Gaps = 24/437 (5%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 118
D ++T +YTSGTTGNPKGVML+ K + I++ + + D +S+LPPWH +ERA
Sbjct: 220 DALSTLIYTSGTTGNPKGVMLSQKGWITAIQNTISRLDMNSNDNAVSLLPPWHAFERAIE 279
Query: 119 YFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 178
Y GI+ + + + +LKDDL+ ++P SVP ++E++Y+GI ++ + +
Sbjct: 280 YAGIFLGIDFLVSNMSSLKDDLRDFRPTIFPSVPRIWESVYNGIIAKVAKEGGFKEKLFH 339
Query: 179 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 238
+R + + + GF K+P+++V+L+ +A +I L PL L++ + ++
Sbjct: 340 FFLRFGSTWAHYYAMCFGFEF--EIKKPNFIVSLVKRTYAFLILVFLSPLKLISIQ-IFS 396
Query: 239 KIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 297
I A+G + +S G +LP +D F AIG+KV GYG+TE+S V++ R T G+
Sbjct: 397 AIHKALGGRIRICISAGSALPSVVDGFLSAIGLKVLEGYGMTETSAVVSIRSNTKPTKGT 456
Query: 298 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 357
VG PI +I++ D + G+KG + ++ Q+++GY+K P + D DG+ +TG
Sbjct: 457 VGIPIAGYQIRLKDDTGKILTDVGAKGTLWIKSKQILKGYYKRPELNQVVFDTDGFFDTG 516
Query: 358 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 417
D+ I+ + LV GR+KDTI L GENVEP+ +E+ L SS I Q++V+
Sbjct: 517 DLMMISHRNE----------LVFAGRSKDTIALIGGENVEPIPIEDKLLTSSFIDQVMVV 566
Query: 418 GQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLY-GELRKWTSKCS--- 473
G D++ GA+IVP+ E V K I A E + + LY E+ + S+ +
Sbjct: 567 GHDKKTLGALIVPNFEAV--ETKIPGISKEKADEWNANPKVRELYRAEISRIISRENGFK 624
Query: 474 -FQIGP---IHVVDEPF 486
F++ P +VV PF
Sbjct: 625 GFEMIPANNFYVVPRPF 641
>gi|410942242|ref|ZP_11374029.1| AMP-binding enzyme [Leptospira noguchii str. 2006001870]
gi|410782497|gb|EKR71501.1| AMP-binding enzyme [Leptospira noguchii str. 2006001870]
Length = 645
Score = 244 bits (624), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 150/422 (35%), Positives = 227/422 (53%), Gaps = 24/422 (5%)
Query: 19 VEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVM 78
+E+ F + DL + + + H + I +D+AT VYTSGTTG PKGVM
Sbjct: 151 LEDTKTFEIILLNDLIEKGKTWIQNKGRDEFHKRGSAILEEDLATIVYTSGTTGKPKGVM 210
Query: 79 LTHKNLLHQIRSLY-----DIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAV 133
LTHKN++ + S ++ P D+ ++ LPPWH+ ER G +T++
Sbjct: 211 LTHKNIVFNVDSALQGEDLNVYPT---DRSMAYLPPWHIAERLVETVCIRAGGAEAFTSI 267
Query: 134 RNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRI 193
L DL +P ++SVP V+E+LY+ I ++ SS ++ + A I+ Y ++ +
Sbjct: 268 STLSQDLADIKPTLLLSVPRVWESLYNKIHDKVRNSSPVQQALFGAFKEIAITY--YRHL 325
Query: 194 YEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVS 252
L + + S +L L + I +LW + +++ L + KI+ +G K +S
Sbjct: 326 SRLQDLEYSLVEQSTFASLWQKLISFWIVILLWIPNQISQ-LAFNKIKQGLGGELKFALS 384
Query: 253 GGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDA 312
G G+LP +ID F+ AIG+ + GYG+TE S + R +G++G I +IK++D
Sbjct: 385 GAGALPQYIDTFFNAIGIPILEGYGMTELSGISTRRILGEITVGTLGRCIPGVQIKLMDE 444
Query: 313 ETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGD-IGWIAPHHSRGRS 371
+ NE+ G KGI +G VM+GY+K P TK L DGWLN+GD + W
Sbjct: 445 KGNEITKPGIKGIAWHKGDHVMKGYYKEPEKTKDILSSDGWLNSGDLLAWT--------- 495
Query: 372 RRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPD 431
G L GRAKDTIVL GEN+EP +E A +RS I+Q +V+G DQ+ GA+IVPD
Sbjct: 496 --TSGELKYSGRAKDTIVLLGGENLEPEPIEFALVRSRFIQQAMVVGHDQKTLGALIVPD 553
Query: 432 KE 433
KE
Sbjct: 554 KE 555
>gi|398338188|ref|ZP_10522891.1| long-chain-fatty-acid--CoA ligase [Leptospira kirschneri serovar
Bim str. 1051]
Length = 645
Score = 244 bits (623), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 149/422 (35%), Positives = 227/422 (53%), Gaps = 24/422 (5%)
Query: 19 VEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVM 78
+E+ F + DL + + + H + I +D+AT VYTSGTTG PKGVM
Sbjct: 151 LEDTESFEIILLNDLIEKGKTWIQNKGKDEFHKRGSAIREEDLATIVYTSGTTGKPKGVM 210
Query: 79 LTHKNLLHQIRSLY-----DIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAV 133
LTHKN++ + ++ P D+ ++ LPPWH+ ER G +T++
Sbjct: 211 LTHKNIVFNVDGALQGEDLNVYPT---DRSMAYLPPWHIAERLVETVCIRAGGAEAFTSI 267
Query: 134 RNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRI 193
L DL +P ++SVP V+E+LY+ I ++ SS ++ + A I+ Y +K +
Sbjct: 268 STLSQDLADIKPTLLLSVPRVWESLYNKIHDKVRNSSPVQQALFGAFKEIAITY--YKHL 325
Query: 194 YEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVS 252
L + + S +L L + I +LW + +++ L + KI+ +G + +S
Sbjct: 326 SRLQDLEYSLVEQSTFASLWQKLISLWIVILLWIPNQISQ-LAFNKIKQGLGGELRFALS 384
Query: 253 GGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDA 312
G G+LP +ID F+ AIG+ + GYG+TE S + R +G++G I +IK++D
Sbjct: 385 GAGALPQYIDTFFNAIGIPILEGYGMTELSGISTRRIFGEITVGTLGRCIPGVQIKLMDE 444
Query: 313 ETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGD-IGWIAPHHSRGRS 371
+ NE+ G KGI +G VM+GY+K P TK+ L DGWLN+GD + W
Sbjct: 445 KGNEITKPGIKGIAWHKGDHVMKGYYKEPEKTKEILSSDGWLNSGDLLAWT--------- 495
Query: 372 RRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPD 431
G L GRAKDTIVL GEN+EP +E A +RS I+Q +V+G DQ+ GA+IVPD
Sbjct: 496 --TSGELKYSGRAKDTIVLLGGENLEPEPIEFALVRSRFIQQAMVVGHDQKTLGALIVPD 553
Query: 432 KE 433
KE
Sbjct: 554 KE 555
>gi|225551923|ref|ZP_03772863.1| long-chain-fatty-acid CoA ligase [Borrelia sp. SV1]
gi|225370921|gb|EEH00351.1| long-chain-fatty-acid CoA ligase [Borrelia sp. SV1]
Length = 630
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 152/480 (31%), Positives = 262/480 (54%), Gaps = 33/480 (6%)
Query: 21 EIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLT 80
+ +++Y + I G RK D+ + S+D+AT +YTSGTTG+PKGVML+
Sbjct: 144 DFEIYTYSDCILFGDNLRK------DSEIIEIASKVDSNDMATIIYTSGTTGHPKGVMLS 197
Query: 81 HKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAV--RNLKD 138
H NLL+Q+ S +V G F+ +LP WH ++R+ Y IF +G+ +++ + R + D
Sbjct: 198 HANLLYQVSSFSLMVDTHVGQIFMCILPIWHSFQRSFSYNIFLKGMVCLFSTIVPRAMLD 257
Query: 139 DLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFC 198
D++ PHY+ +VP ++ + I K++ R++ ++ +F R+ G
Sbjct: 258 DIKNVNPHYIAAVPRLWIAIRQNIYKEVSKKPFISRMIFHFFVKAAFLSDICYRVVMGL- 316
Query: 199 LTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSL 257
N + + I ++ +ICA +P L L++ KI +G + G++GGGS+
Sbjct: 317 YPDNGFSLFFPIKKILGIFG-LICA--FPFKALGNILIFNKINKILGNNFVVGITGGGSM 373
Query: 258 PMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEV 317
P+ F+ +IG+++ YGLTE+SP +A+ + ++G+ G + T +I D + N++
Sbjct: 374 PLSAFRFFNSIGIELANAYGLTETSPGVASNKHKKVIIGTCGKILPGTLAEIRDTDGNKL 433
Query: 318 LPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGV 377
G KGI+ V+G QVM GY+K+ AT + + DG+LNTGDI ++ + V
Sbjct: 434 KKPG-KGILFVKGPQVMLGYYKDKEATCKIIGSDGFLNTGDIAKLSKDN----------V 482
Query: 378 LVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLM 437
+ + GR KDTIVL+ GENVEP +E S+LI + VV+GQDQ+ GA+I+P+ EE+
Sbjct: 483 VQIIGREKDTIVLNNGENVEPAPIEIKLEESALIEKAVVVGQDQKFLGALILPNFEEINK 542
Query: 438 AAKRLSIVHADASE----LSKEKTISLLYGELRKWTSKCSF-----QIGPIHVVDEPFTV 488
+ + DA+ ++ + + E++K +K + QI ++++PF V
Sbjct: 543 YLESVGQKIFDANNRRQIIANNIVLKAINDEIKKLINKANGFKPFEQILKFTLLEKPFEV 602
>gi|387827058|ref|YP_005806340.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi N40]
gi|312149486|gb|ADQ29557.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi N40]
Length = 630
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 152/480 (31%), Positives = 262/480 (54%), Gaps = 33/480 (6%)
Query: 21 EIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLT 80
+ +++Y + I G RK D+ + S+D+AT +YTSGTTG+PKGVML+
Sbjct: 144 DFEIYTYSDCILFGDTLRK------DSEIIEIASKVDSNDMATIIYTSGTTGHPKGVMLS 197
Query: 81 HKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAV--RNLKD 138
H NLL+Q+ S +V G F+ +LP WH ++R+ Y IF +G+ +++ + R + D
Sbjct: 198 HANLLYQVSSFSLMVDTHVGQIFMCILPIWHSFQRSFSYNIFLKGMVCLFSTIVPRAMLD 257
Query: 139 DLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFC 198
D++ PHY+ +VP ++ + I K++ R++ ++ +F R+ G
Sbjct: 258 DIKNVNPHYIAAVPRLWIAIRQNIYKEVSKKPFISRMIFHFFVKAAFLSDICYRVVMGL- 316
Query: 199 LTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSL 257
N + + I ++ +ICA +P L L++ KI +G + G++GGGS+
Sbjct: 317 YPDNGFSLFFPIKKILGIFG-LICA--FPFKALGNVLIFNKINKILGNNFVVGITGGGSM 373
Query: 258 PMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEV 317
P+ F+ +IG+++ YGLTE+SP +A+ + ++G+ G + T +I D + N++
Sbjct: 374 PLSAVRFFNSIGIELANAYGLTETSPGVASNKHKKVIIGTCGKILPGTVAEIRDTDGNKL 433
Query: 318 LPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGV 377
G KGI+ V+G QVM GY+K+ AT + + DG+LNTGDI ++ + V
Sbjct: 434 KKPG-KGILFVKGPQVMLGYYKDKEATCKIIGSDGFLNTGDIAKLSKDN----------V 482
Query: 378 LVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLM 437
+ + GR KDTIVL+ GENVEP +E S+LI + VV+GQDQ+ GA+I+P+ EE+
Sbjct: 483 VQIIGREKDTIVLNNGENVEPAPIEIKLEESALIEKAVVVGQDQKFLGALILPNFEEINK 542
Query: 438 AAKRLSIVHADASE----LSKEKTISLLYGELRKWTSKCSF-----QIGPIHVVDEPFTV 488
+ + DA+ ++ + + E++K +K + QI ++++PF V
Sbjct: 543 YLESVGQKIFDANNRRQIIANNIVLKAINDEIKKLINKANGFKPFEQILKFTLLEKPFEV 602
>gi|216264699|ref|ZP_03436691.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi 156a]
gi|215981172|gb|EEC21979.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi 156a]
Length = 630
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 152/480 (31%), Positives = 262/480 (54%), Gaps = 33/480 (6%)
Query: 21 EIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLT 80
+ +++Y + I G RK D+ + S+D+AT +YTSGTTG+PKGVML+
Sbjct: 144 DFEIYTYSDCILFGDNLRK------DSEIIEIASKVDSNDMATIIYTSGTTGHPKGVMLS 197
Query: 81 HKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAV--RNLKD 138
H NLL+Q+ S +V G F+ +LP WH ++R+ Y IF +G+ +++ + R + D
Sbjct: 198 HANLLYQVSSFSLMVDTHVGQIFMCILPIWHSFQRSFSYNIFLKGMVCLFSTIVPRAMLD 257
Query: 139 DLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFC 198
D++ PHY+ +VP ++ + I K++ R++ ++ +F R+ G
Sbjct: 258 DIKNVNPHYIAAVPRLWIAIRQNIYKEVSKKPFISRMIFHFFVKAAFLSDICYRVVMGL- 316
Query: 199 LTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSL 257
N + + I ++ +ICA +P L L++ KI +G + G++GGGS+
Sbjct: 317 YPDNGFSLFFPIKKILGIFG-LICA--FPFKALGNVLIFNKINKILGNNFVVGITGGGSM 373
Query: 258 PMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEV 317
P+ F+ +IG+++ YGLTE+SP +A+ + ++G+ G + T +I D + N++
Sbjct: 374 PLSAVRFFNSIGIELANAYGLTETSPGVASNKHKKVIIGTCGKILPGTVAEIRDIDGNKL 433
Query: 318 LPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGV 377
G KGI+ V+G QVM GY+K+ AT + + DG+LNTGDI ++ + V
Sbjct: 434 KKPG-KGILFVKGPQVMLGYYKDKEATCKIIGSDGFLNTGDIAKLSKDN----------V 482
Query: 378 LVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLM 437
+ + GR KDTIVL+ GENVEP +E S+LI + VV+GQDQ+ GA+I+P+ EE+
Sbjct: 483 VQIIGREKDTIVLNNGENVEPAPIEIKLEESALIEKAVVVGQDQKFLGALILPNFEEINK 542
Query: 438 AAKRLSIVHADASE----LSKEKTISLLYGELRKWTSKCSF-----QIGPIHVVDEPFTV 488
+ + DA+ ++ + + E++K +K + QI ++++PF V
Sbjct: 543 YLESVGQKIFDANNRRQIIANNIVLKAINDEIKKLINKANGFKPFEQILKFTLLEKPFEV 602
>gi|225549259|ref|ZP_03770232.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi 94a]
gi|225370117|gb|EEG99557.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi 94a]
Length = 630
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 152/480 (31%), Positives = 262/480 (54%), Gaps = 33/480 (6%)
Query: 21 EIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLT 80
+ +++Y + I G RK D+ + S+D+AT +YTSGTTG+PKGVML+
Sbjct: 144 DFEIYTYSDCILFGDNLRK------DSEIIEIASKVDSNDMATIIYTSGTTGHPKGVMLS 197
Query: 81 HKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAV--RNLKD 138
H NLL+Q+ S +V G F+ +LP WH ++R+ Y IF +G+ +++ + R + D
Sbjct: 198 HANLLYQVSSFSLMVDTHVGQIFMCILPIWHSFQRSFSYNIFLKGMVCLFSTIVPRAMLD 257
Query: 139 DLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFC 198
D++ PHY+ +VP ++ + I K++ R++ ++ +F R+ G
Sbjct: 258 DIKNVNPHYIAAVPRLWIAIRQNIYKEVSKKPFISRMIFHFFVKAAFLSDICYRVVMGL- 316
Query: 199 LTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSL 257
N + + I ++ +ICA +P L L++ KI +G + G++GGGS+
Sbjct: 317 YPDNGFSLFFPIKKILGIFG-LICA--FPFKALGNVLIFNKINKILGNNFVVGITGGGSM 373
Query: 258 PMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEV 317
P+ F+ +IG+++ YGLTE+SP +A+ + ++G+ G + T +I D + N++
Sbjct: 374 PLSAVRFFNSIGIELANAYGLTETSPGVASNKHKKVIIGTCGKILPGTVAEIRDIDGNKL 433
Query: 318 LPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGV 377
G KGI+ V+G QVM GY+K+ AT + + DG+LNTGDI ++ + V
Sbjct: 434 KKPG-KGILFVKGPQVMLGYYKDKEATCKIIGSDGFLNTGDIAKLSKDN----------V 482
Query: 378 LVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLM 437
+ + GR KDTIVL+ GENVEP +E S+LI + VV+GQDQ+ GA+I+P+ EE+
Sbjct: 483 VQIIGREKDTIVLNNGENVEPAPIEIKLEESALIEKAVVVGQDQKFLGALILPNFEEINK 542
Query: 438 AAKRLSIVHADASE----LSKEKTISLLYGELRKWTSKCSF-----QIGPIHVVDEPFTV 488
+ + DA+ ++ + + E++K +K + QI ++++PF V
Sbjct: 543 YLESVGQKIFDANNRRQIIANNIVLKAINDEIKKLINKANGFKPFEQILKFTLLEKPFEV 602
>gi|221217462|ref|ZP_03588933.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi 72a]
gi|224533985|ref|ZP_03674569.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi CA-11.2a]
gi|225549859|ref|ZP_03770821.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi 118a]
gi|221192740|gb|EEE18956.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi 72a]
gi|224512821|gb|EEF83188.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi CA-11.2a]
gi|225369550|gb|EEG99001.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi 118a]
Length = 630
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 152/480 (31%), Positives = 262/480 (54%), Gaps = 33/480 (6%)
Query: 21 EIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLT 80
+ +++Y + I G RK D+ + S+D+AT +YTSGTTG+PKGVML+
Sbjct: 144 DFEIYTYSDCILFGDNLRK------DSEIIEIASKVDSNDMATIIYTSGTTGHPKGVMLS 197
Query: 81 HKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAV--RNLKD 138
H NLL+Q+ S +V G F+ +LP WH ++R+ Y IF +G+ +++ + R + D
Sbjct: 198 HANLLYQVSSFSLMVDTHVGQIFMCILPIWHSFQRSFSYNIFLKGMVCLFSTIVPRAMLD 257
Query: 139 DLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFC 198
D++ PHY+ +VP ++ + I K++ R++ ++ +F R+ G
Sbjct: 258 DIKNVNPHYIAAVPRLWIAIRQNIYKEVSKKPFISRMIFHFFVKAAFLSDICYRVVMGL- 316
Query: 199 LTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSL 257
N + + I ++ +ICA +P L L++ KI +G + G++GGGS+
Sbjct: 317 YPDNGFSLFFPIKKILGIFG-LICA--FPFKALGNVLIFNKINKILGNNFVVGITGGGSM 373
Query: 258 PMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEV 317
P+ F+ +IG+++ YGLTE+SP +A+ + ++G+ G + T +I D + N++
Sbjct: 374 PLSAVRFFNSIGIELANAYGLTETSPGVASNKHKKVIIGTCGKILPGTVAEIRDIDGNKL 433
Query: 318 LPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGV 377
G KGI+ V+G QVM GY+K+ AT + + DG+LNTGDI ++ + V
Sbjct: 434 KKPG-KGILFVKGPQVMLGYYKDKEATCKIIGSDGFLNTGDIAKLSKDN----------V 482
Query: 378 LVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLM 437
+ + GR KDTIVL+ GENVEP +E S+LI + VV+GQDQ+ GA+I+P+ EE+
Sbjct: 483 VQIIGREKDTIVLNNGENVEPAPIEIKLEESALIEKAVVVGQDQKFLGALILPNFEEINK 542
Query: 438 AAKRLSIVHADASE----LSKEKTISLLYGELRKWTSKCSF-----QIGPIHVVDEPFTV 488
+ + DA+ ++ + + E++K +K + QI ++++PF V
Sbjct: 543 YLESVGQKIFDANNRRQIIANNIVLKAINDEIKKLINKANGFKPFEQILKFTLLEKPFEV 602
>gi|387825795|ref|YP_005805248.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi JD1]
gi|312147986|gb|ADQ30645.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi JD1]
Length = 630
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 152/480 (31%), Positives = 262/480 (54%), Gaps = 33/480 (6%)
Query: 21 EIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLT 80
+ +++Y + I G RK D+ + S+D+AT +YTSGTTG+PKGVML+
Sbjct: 144 DFEIYTYSDCILFGDNLRK------DSEIIEIASKVDSNDMATIIYTSGTTGHPKGVMLS 197
Query: 81 HKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAV--RNLKD 138
H NLL+Q+ S +V G F+ +LP WH ++R+ Y IF +G+ +++ + R + D
Sbjct: 198 HANLLYQVSSFSLMVDTHVGQIFMCILPIWHSFQRSFSYNIFLKGMVCLFSTIVPRAMLD 257
Query: 139 DLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFC 198
D++ PHY+ +VP ++ + I K++ R++ ++ +F R+ G
Sbjct: 258 DIKNVNPHYIAAVPRLWIAIRQNIYKEVSKKPFISRMIFHFFVKAAFLSDICYRVVMGL- 316
Query: 199 LTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSL 257
N + + I ++ +ICA +P L L++ KI +G + G++GGGS+
Sbjct: 317 YPDNGFSLFFPIKKILGIFG-LICA--FPFKALGSVLIFNKINKILGNNFVVGITGGGSM 373
Query: 258 PMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEV 317
P+ F+ +IG+++ YGLTE+SP +A+ + ++G+ G + T +I D + N++
Sbjct: 374 PLSAVRFFNSIGIELANAYGLTETSPGVASNKHKKVIIGTCGKILPGTVAEIRDIDGNKL 433
Query: 318 LPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGV 377
G KGI+ V+G QVM GY+K+ AT + + DG+LNTGDI ++ + V
Sbjct: 434 KKPG-KGILFVKGPQVMLGYYKDKEATCKIIGSDGFLNTGDIAKLSKDN----------V 482
Query: 378 LVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLM 437
+ + GR KDTIVL+ GENVEP +E S+LI + VV+GQDQ+ GA+I+P+ EE+
Sbjct: 483 VQIIGREKDTIVLNNGENVEPAPIEIKLEESALIEKAVVVGQDQKFLGALILPNFEEINK 542
Query: 438 AAKRLSIVHADASE----LSKEKTISLLYGELRKWTSKCSF-----QIGPIHVVDEPFTV 488
+ + DA+ ++ + + E++K +K + QI ++++PF V
Sbjct: 543 YLESVGQKIFDANNRRQIIANNIVLKAINDEIKKLINKANGFKPFEQILKFTLLEKPFEV 602
>gi|224532780|ref|ZP_03673396.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi WI91-23]
gi|224512268|gb|EEF82653.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi WI91-23]
Length = 617
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 142/418 (33%), Positives = 237/418 (56%), Gaps = 24/418 (5%)
Query: 21 EIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLT 80
+ +++Y + I G RK D+ + S+D+AT +YTSGTTG+PKGVML+
Sbjct: 144 DFEIYTYSDCILFGDTLRK------DSEIIEIASKVDSNDMATIIYTSGTTGHPKGVMLS 197
Query: 81 HKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAV--RNLKD 138
H NLL+Q+ S +V G F+ +LP WH ++R+ Y IF +G+ +++ + R + D
Sbjct: 198 HANLLYQVSSFSLMVDTHVGQIFMCILPIWHSFQRSFSYNIFLKGMVCLFSTIVPRAMLD 257
Query: 139 DLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFC 198
D++ PHY+ +VP ++ + I K++ R++ ++ +F R+ G
Sbjct: 258 DIKNVNPHYIAAVPRLWIAIRQNIYKEVSKKPFISRMIFHFFVKAAFLSDICYRVVMGL- 316
Query: 199 LTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSL 257
N + + I ++ +ICA +P L L++ KI +G + G++GGGS+
Sbjct: 317 YPDNGFSLFFPIKKILGIFG-LICA--FPFKALGNVLIFNKINKILGNNFVVGITGGGSM 373
Query: 258 PMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEV 317
P+ F+ +IG+++ YGLTE+SP +A+ + ++G+ G + T +I D + N++
Sbjct: 374 PLSAVRFFNSIGIELANAYGLTETSPGVASNKHKKVIIGTCGKILPGTVAEIRDTDGNKL 433
Query: 318 LPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGV 377
G KGI+ V+G QVM GY+K+ AT + + DG+LNTGDI ++ + V
Sbjct: 434 KKPG-KGILFVKGPQVMLGYYKDKEATCKIIGSDGFLNTGDIAKLSKDN----------V 482
Query: 378 LVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 435
+ + GR KDTIVL+ GENVEP +E S+LI + VV+GQDQ+ GA+I+P+ EE+
Sbjct: 483 VQIIGREKDTIVLNNGENVEPAPIEIKLEESALIEKAVVVGQDQKFLGALILPNFEEI 540
>gi|15594482|ref|NP_212271.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi B31]
gi|195941874|ref|ZP_03087256.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi 80a]
gi|195942358|ref|ZP_03087740.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi 80a]
gi|195942377|ref|ZP_03087759.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi 80a]
gi|195942400|ref|ZP_03087782.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi 80a]
gi|218249890|ref|YP_002374665.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi ZS7]
gi|223889090|ref|ZP_03623679.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi 64b]
gi|226321952|ref|ZP_03797477.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi Bol26]
gi|2688028|gb|AAC66529.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi B31]
gi|218165078|gb|ACK75139.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi ZS7]
gi|223885339|gb|EEF56440.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi 64b]
gi|226232542|gb|EEH31296.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi Bol26]
Length = 630
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 152/480 (31%), Positives = 262/480 (54%), Gaps = 33/480 (6%)
Query: 21 EIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLT 80
+ +++Y + I G RK D+ + S+D+AT +YTSGTTG+PKGVML+
Sbjct: 144 DFEIYTYSDCILFGDTLRK------DSEIIEIASKVDSNDMATIIYTSGTTGHPKGVMLS 197
Query: 81 HKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAV--RNLKD 138
H NLL+Q+ S +V G F+ +LP WH ++R+ Y IF +G+ +++ + R + D
Sbjct: 198 HANLLYQVSSFSLMVDTHVGQIFMCILPIWHSFQRSFSYNIFLKGMVCLFSTIVPRAMLD 257
Query: 139 DLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFC 198
D++ PHY+ +VP ++ + I K++ R++ ++ +F R+ G
Sbjct: 258 DIKNVNPHYIAAVPRLWIAIRQNIYKEVSKKPFISRMIFHFFVKAAFLSDICYRVVMGL- 316
Query: 199 LTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSL 257
N + + I ++ +ICA +P L L++ KI +G + G++GGGS+
Sbjct: 317 YPDNGFSLFFPIKKILGIFG-LICA--FPFKALGNVLIFNKINKILGNNFVVGITGGGSM 373
Query: 258 PMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEV 317
P+ F+ +IG+++ YGLTE+SP +A+ + ++G+ G + T +I D + N++
Sbjct: 374 PLSAVRFFNSIGIELANAYGLTETSPGVASNKHKKVIIGTCGKILPGTVAEIRDIDGNKL 433
Query: 318 LPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGV 377
G KGI+ V+G QVM GY+K+ AT + + DG+LNTGDI ++ + V
Sbjct: 434 KKPG-KGILFVKGPQVMLGYYKDKEATCKIIGSDGFLNTGDIAKLSKDN----------V 482
Query: 378 LVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLM 437
+ + GR KDTIVL+ GENVEP +E S+LI + VV+GQDQ+ GA+I+P+ EE+
Sbjct: 483 VQIIGREKDTIVLNNGENVEPAPIEIKLEESALIEKAVVVGQDQKFLGALILPNFEEINK 542
Query: 438 AAKRLSIVHADASE----LSKEKTISLLYGELRKWTSKCSF-----QIGPIHVVDEPFTV 488
+ + DA+ ++ + + E++K +K + QI ++++PF V
Sbjct: 543 YLESVGQKIFDANNRRQIIANNIVLKAINDEIKKLINKANGFKPFEQILKFTLLEKPFEV 602
>gi|226320671|ref|ZP_03796229.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi 29805]
gi|226233887|gb|EEH32610.1| long-chain-fatty-acid CoA ligase [Borrelia burgdorferi 29805]
Length = 630
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 152/480 (31%), Positives = 262/480 (54%), Gaps = 33/480 (6%)
Query: 21 EIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLT 80
+ +++Y + I G RK D+ + S+D+AT +YTSGTTG+PKGVML+
Sbjct: 144 DFEIYTYSDCILFGDALRK------DSEIIEIASKVDSNDMATIIYTSGTTGHPKGVMLS 197
Query: 81 HKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAV--RNLKD 138
H NLL+Q+ S +V G F+ +LP WH ++R+ Y IF +G+ +++ + R + D
Sbjct: 198 HANLLYQVSSFSLMVDTHVGQIFMCILPIWHSFQRSFSYNIFLKGMVCLFSTIVPRAMLD 257
Query: 139 DLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFC 198
D++ PHY+ +VP ++ + I K++ R++ ++ +F R+ G
Sbjct: 258 DIKNVNPHYIAAVPRLWIAIRQNIYKEVSKKPFISRMIFHFFVKAAFLSDICYRVVMGL- 316
Query: 199 LTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSL 257
N + + I ++ +ICA +P L L++ KI +G + G++GGGS+
Sbjct: 317 YPDNGFSLFFPIKKILGIFG-LICA--FPFKALGNVLIFNKINKILGNNFVVGITGGGSM 373
Query: 258 PMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEV 317
P+ F+ +IG+++ YGLTE+SP +A+ + ++G+ G + T +I D + N++
Sbjct: 374 PLSAVRFFNSIGIELANAYGLTETSPGVASNKHKKVIIGTCGKILPGTVAEIRDIDGNKL 433
Query: 318 LPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGV 377
G KGI+ V+G QVM GY+K+ AT + + DG+LNTGDI ++ + V
Sbjct: 434 KKPG-KGILFVKGPQVMLGYYKDKEATCKIIGSDGFLNTGDIAKLSKDN----------V 482
Query: 378 LVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLM 437
+ + GR KDTIVL+ GENVEP +E S+LI + VV+GQDQ+ GA+I+P+ EE+
Sbjct: 483 VQIIGREKDTIVLNNGENVEPAPIEIKLEESALIEKAVVVGQDQKFLGALILPNFEEINK 542
Query: 438 AAKRLSIVHADASE----LSKEKTISLLYGELRKWTSKCSF-----QIGPIHVVDEPFTV 488
+ + DA+ ++ + + E++K +K + QI ++++PF V
Sbjct: 543 YLESVGQKIFDANNRRQIIANNIVLKAINDEIKKLINKANGFKPFEQILKFTLLEKPFEV 602
>gi|302338016|ref|YP_003803222.1| AMP-dependent synthetase and ligase [Spirochaeta smaragdinae DSM
11293]
gi|301635201|gb|ADK80628.1| AMP-dependent synthetase and ligase [Spirochaeta smaragdinae DSM
11293]
Length = 634
Score = 242 bits (618), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 159/454 (35%), Positives = 248/454 (54%), Gaps = 30/454 (6%)
Query: 5 ILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATY 64
I+L+ S + + + + S+DE++ G E D D + + +D+AT
Sbjct: 135 IILFDASRSPSKKLPSSLELSSFDEMMKRGSELLPQKQDFFDK----EIDKGSLNDLATI 190
Query: 65 VYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSR 124
+YTSGTTG PKGVML H++ + Q+ +YD + G LS+LP WH +ERA Y + +R
Sbjct: 191 IYTSGTTGEPKGVMLPHRSFIFQLDRVYDHIQIVPGHILLSVLPVWHSFERAVEYIMLAR 250
Query: 125 GIELMYTAVRN--LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIR 182
G + Y+ + D+Q+ +P ++ SVP ++E + + I K I ++++ +
Sbjct: 251 GAAIAYSKPIGAVMLPDMQKVKPQWLASVPRIWEGVRAAIFKNISKEGKVKQLLFSFFVT 310
Query: 183 ISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILW---PLHLLAEKLVYKK 239
+ ++A F + ++K P + V WL + L P LL LV+ K
Sbjct: 311 VGELHSAM------FNMVTDRK-PDF-VGRHRWLDILLAIIPLILLTPFQLLGSLLVFGK 362
Query: 240 IQSAIGISK-AGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSV 298
+++ +G AG+SGGG+LP ++D F++A G+ + GYGLTE+ PV+A R+ V G+V
Sbjct: 363 LKARLGGKFIAGISGGGALPPYVDRFFQAAGILLLEGYGLTETGPVLAVRKQKHPVHGTV 422
Query: 299 GHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGD 358
G + E ++VD E VLP G KG++ V+ QVM GY+K AT+ L DGWLNTGD
Sbjct: 423 GPLLADIEHRVVDRE-GVVLPPGRKGVLYVKSPQVMDGYYKREEATEAVL-HDGWLNTGD 480
Query: 359 IGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIG 418
I R G +L GRAK+TIVL GEN+EP+ +EE S I Q +V+G
Sbjct: 481 ITLFT---------RQGEFKIL-GRAKETIVLLGGENIEPVPIEEHLCASDAIAQAMVVG 530
Query: 419 QDQRRPGAIIVPDKEEVLMAAKRLSIVHADASEL 452
QD++ A+IVP+ E++ A+ I + A EL
Sbjct: 531 QDKKFLAALIVPEMEKLQQYAQEKGISYIQAEEL 564
>gi|294462826|gb|ADE76955.1| unknown [Picea sitchensis]
Length = 272
Score = 241 bits (614), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 123/242 (50%), Positives = 174/242 (71%), Gaps = 1/242 (0%)
Query: 248 KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEI 307
K G++ G S+P+H+D F+EAIG+ + YGLTE + + + R CNVLG+ G P++ E+
Sbjct: 2 KIGLTAGASIPLHVDQFFEAIGITLLNAYGLTEMTSIYSGRNTECNVLGTAGLPLHGIEV 61
Query: 308 KIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHS 367
K+VD ET +L +G KG++KVRG Q+M+GY+KN AT +A+D+D WL+TGD+GW+A
Sbjct: 62 KVVDPETGAILKSGEKGLIKVRGPQLMKGYYKNIDATMKAIDKDNWLDTGDLGWLASQKP 121
Query: 368 RGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAI 427
RRCGG++V+EGRAKDTIVLSTGENVEP+E+E AAL S+LI QIVV+GQDQRR GA+
Sbjct: 122 G-GGRRCGGMMVVEGRAKDTIVLSTGENVEPIEIEAAALESNLIEQIVVVGQDQRRLGAL 180
Query: 428 IVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSKCSFQIGPIHVVDEPFT 487
IVP+ E + + A+ L+ S+ + L+ EL + TS+C F IGP +++E FT
Sbjct: 181 IVPNMEAIQLEARELAKSKGITSQPTVGDFKELIRRELIEHTSRCPFHIGPFVLLEEHFT 240
Query: 488 VN 489
V+
Sbjct: 241 VD 242
>gi|398334435|ref|ZP_10519140.1| long-chain-fatty-acid--CoA ligase [Leptospira kmetyi serovar
Malaysia str. Bejo-Iso9]
Length = 628
Score = 239 bits (609), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 143/396 (36%), Positives = 218/396 (55%), Gaps = 16/396 (4%)
Query: 50 HYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRS--LYDIVPAENGDKFLSML 107
H + I +D+AT VYTSGTTG PKGVML+H+N++ + S L D + D+ ++ L
Sbjct: 165 HKRGSAIREEDLATIVYTSGTTGKPKGVMLSHRNIVFNVDSALLGDDLNVYPTDRSMAYL 224
Query: 108 PPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIF 167
PPWH+ ER G +T++ L DL +P ++SVP V+E+LY+ I ++
Sbjct: 225 PPWHIAERLVETICVRAGGAEAFTSISTLSQDLSDIKPTLLLSVPRVWESLYNKIHDKVR 284
Query: 168 TSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWP 227
+S ++ + A I+ Y +K I L + + S +L + I +LW
Sbjct: 285 GASPVQQALFGAFKEIAITY--YKHISRLQGLEYSLTEESTFASLWQKFISLWIVILLWI 342
Query: 228 LHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIA 286
+ +A+ L + KI+ +G + +SG G+LP +ID F+ AIG+ + GYG+TE S +
Sbjct: 343 PNQIAQ-LAFNKIKQGLGGELRFALSGAGALPQYIDTFFNAIGIPILEGYGMTELSGIST 401
Query: 287 ARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQ 346
R +G++G I +IK++D + E+ G KGI +G VM+GY+K P TK+
Sbjct: 402 RRILGEITVGTLGRCIPGVQIKLMDEKGKEITKPGVKGIAWHKGDHVMKGYYKEPEKTKE 461
Query: 347 ALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAAL 406
L DGWLN+GD+ + G L GRAKDTIVL GEN+EP +E A +
Sbjct: 462 ILSSDGWLNSGDL----------LTWTTSGELKYSGRAKDTIVLLGGENLEPEPIEFALV 511
Query: 407 RSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRL 442
RS I Q +V+G DQ+ GA+IVP++E + K L
Sbjct: 512 RSQFIHQAMVVGHDQKTLGALIVPNEEALEKYLKEL 547
>gi|332297617|ref|YP_004439539.1| 4-coumarate--CoA ligase [Treponema brennaborense DSM 12168]
gi|332180720|gb|AEE16408.1| Long-chain-fatty-acid--CoA ligase., 4-coumarate--CoA ligase
[Treponema brennaborense DSM 12168]
Length = 653
Score = 237 bits (605), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 150/428 (35%), Positives = 231/428 (53%), Gaps = 28/428 (6%)
Query: 22 IPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTH 81
I VFS+ E+ G + SD+ + + D+IAT ++TSGTTG PKGVMLTH
Sbjct: 163 IRVFSFAELEAKGARA----SDAERTAIEAEMDKTSPDEIATIIFTSGTTGVPKGVMLTH 218
Query: 82 KNLLHQIRSLYDIVP-AENGDKFLSMLPPWHVYERACGYFIFSRGIELMYT--AVRNLKD 138
N + Q+ + ++ E+GD +LS+LP WH +ER Y + L Y+ +
Sbjct: 219 DNFIAQVEVVKSVLTNTEDGDLWLSVLPVWHSFERVFQYLVMGLNSGLAYSKPVAAVMLA 278
Query: 139 DLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFC 198
D+ +P M VP ++E+L G+ + + + + I + ++ + G
Sbjct: 279 DMATLRPQAMCGVPRLWESLAQGVFRTMRKTGGVPYKLFLFFISVGKKFSWAREHVRGLV 338
Query: 199 LTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSL 257
+++ ++D L + +L PL+ L LVY+KI++ +G + +SGGG+L
Sbjct: 339 CRLHRRS-----RILDALVGILPLILLSPLYALGNLLVYRKIRAKLGGRMECAISGGGAL 393
Query: 258 PMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAE---- 313
D FY AIG K+ GYG+TE++PV++ R P+ G VG +IK+V E
Sbjct: 394 QSETDAFYRAIGFKLLEGYGITEAAPVLSVRWPSKPRSGCVGQVYPCAQIKVVAEEHGRI 453
Query: 314 -TNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSR 372
+ E LP G G+V RG Q+M+GY+K P T+Q +D+DGWLNTGD+G ++ +
Sbjct: 454 VSGEPLPPGKSGLVLARGRQIMKGYYKRPDLTEQVVDKDGWLNTGDLGVLSYDNE----- 508
Query: 373 RCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDK 432
+ + GRAKDTIVL GEN+EPL +E A S I V+ GQD++ GA+IVP K
Sbjct: 509 -----IKITGRAKDTIVLLGGENIEPLVIESALCGSPYIESAVIQGQDKKYLGALIVPVK 563
Query: 433 EEVLMAAK 440
E +L A+
Sbjct: 564 EAILTFAQ 571
>gi|398341584|ref|ZP_10526287.1| long-chain-fatty-acid--CoA ligase [Leptospira inadai serovar Lyme
str. 10]
Length = 644
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 149/434 (34%), Positives = 235/434 (54%), Gaps = 24/434 (5%)
Query: 4 IILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIAT 63
+++L+ S + P++ + D++I LG + D + H + E++ D++AT
Sbjct: 141 VVILFEPSSHIGPNL--PFKLLHLDDLISLGD---RWIQDKGEMEFHKRGESVSEDELAT 195
Query: 64 YVYTSGTTGNPKGVMLTHKNLLHQI-RSL-YDIVPAENGDKFLSMLPPWHVYERACGYFI 121
VYTSGTTG PKGVML+HKN+L + SL D + D+ ++ LPPWH+ ER
Sbjct: 196 IVYTSGTTGRPKGVMLSHKNILFNVDMSLSIDDIQFNADDRTMAYLPPWHIAERLIETGC 255
Query: 122 FSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALI 181
G +T++ +L DLQ +P +++SVP V+E+ Y+ I + +S R + +
Sbjct: 256 IRIGASEAFTSISSLAQDLQEIRPTFLLSVPRVWESFYNKIHDKSREASPLARFLFKIFQ 315
Query: 182 RISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQ 241
+F + +K +G L ++ S A ++ A L+P +LLA + +I+
Sbjct: 316 GAAFTFHKYKSRLQG--LEYMLERISIFREFARRAVALLVVAFLFPANLLA-MAAFSRIR 372
Query: 242 SAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGH 300
+ +G K +SG G+LP +ID F+ +IG+ + GYG+TE V RR +G++G
Sbjct: 373 NGLGGRLKFALSGAGALPEYIDRFFNSIGIPILEGYGMTELGGVSTRRRLNSITVGTLGR 432
Query: 301 PINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGD-I 359
I EIK++D E+ G KGI +G VM GY+K+P T + + DGWLN+GD +
Sbjct: 433 CIPGVEIKLIDERGKEIHEPGVKGIAWHKGPHVMMGYYKDPEKTAEII-VDGWLNSGDLL 491
Query: 360 GWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQ 419
W G L GRAKDTIVLS GEN+EP +E A +S LI Q +++G
Sbjct: 492 LWT-----------VQGELKYAGRAKDTIVLSGGENLEPEPIEFALTQSELILQAMIVGH 540
Query: 420 DQRRPGAIIVPDKE 433
D++ A++VPD E
Sbjct: 541 DKKALSALLVPDWE 554
>gi|359688035|ref|ZP_09258036.1| long-chain-fatty-acid--CoA ligase [Leptospira licerasiae serovar
Varillal str. MMD0835]
gi|418747832|ref|ZP_13304127.1| AMP-binding enzyme [Leptospira licerasiae str. MMD4847]
gi|418758109|ref|ZP_13314293.1| AMP-binding enzyme [Leptospira licerasiae serovar Varillal str. VAR
010]
gi|384114816|gb|EIE01077.1| AMP-binding enzyme [Leptospira licerasiae serovar Varillal str. VAR
010]
gi|404276682|gb|EJZ43993.1| AMP-binding enzyme [Leptospira licerasiae str. MMD4847]
Length = 644
Score = 234 bits (597), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 144/413 (34%), Positives = 228/413 (55%), Gaps = 28/413 (6%)
Query: 28 DEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQ 87
DE+I LG + + + H + E+I D+AT VYTSGTTG PKGVML+H+N++
Sbjct: 163 DELISLGD---RWIQEKGELEFHSRGESIQESDLATIVYTSGTTGRPKGVMLSHRNIVFN 219
Query: 88 IR---SLYD--IVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQR 142
+ SL D I P D+ ++ LPPWH+ ER G +T++ +L DLQ
Sbjct: 220 VNMSLSLDDVRITPE---DRTMAYLPPWHIAERLIETACVRAGASEAFTSISSLGQDLQD 276
Query: 143 YQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRN 202
+P +++SVP V+E+ Y+ +Q ++ +S + + ++ + +Y +K G L +
Sbjct: 277 IKPTFLLSVPRVWESFYNKVQDKLKDASPVAKFIFKSFQSAANSYYKYKSRLLG--LEFS 334
Query: 203 QKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHI 261
K S+ + + + W + + +L++ KI+ ++G K +SG G+LP +I
Sbjct: 335 LKPRSFFGEFFHRM-SGLFGTFFWFVPNILAQLLFSKIRKSLGGRLKFAISGAGALPEYI 393
Query: 262 DLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAG 321
D F+ +IG+ + GYG+TE+S RR +G++G I EIKI+D + E+ G
Sbjct: 394 DRFFNSIGIPILEGYGMTETSGASTRRRLDRITVGTLGKCIPGVEIKILDEKGEEIHEPG 453
Query: 322 SKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGD-IGWIAPHHSRGRSRRCGGVLVL 380
KGI +G +MQGY+ +P T + + +DGWLN+GD + W A G L
Sbjct: 454 VKGIAWHKGGHIMQGYYLDPEKTAETM-KDGWLNSGDLLLWTAQ-----------GELKY 501
Query: 381 EGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 433
GRAKDTIVL GEN+EP +E A +S LI Q +++G DQ+ A++VPD E
Sbjct: 502 AGRAKDTIVLLGGENLEPEPIEFALTQSELILQAMIVGHDQKTLSALLVPDWE 554
>gi|398343925|ref|ZP_10528628.1| long-chain-fatty-acid--CoA ligase [Leptospira inadai serovar Lyme
str. 10]
Length = 630
Score = 234 bits (596), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 151/429 (35%), Positives = 229/429 (53%), Gaps = 21/429 (4%)
Query: 10 KKSSVAPDIVEE--IPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYT 67
KK V D + E I + S E+I+ G+ S + D K E D++AT +YT
Sbjct: 133 KKVYVLEDDIGELKIGIGSVGELIETGK---TYLSQNPDCIKKRLMEK-SPDELATLIYT 188
Query: 68 SGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIE 127
SGTTG PKGVMLT + + + V + D +S+LPPWH +ERA Y I G E
Sbjct: 189 SGTTGAPKGVMLTQTGWISAVEKVIGFVGLTSSDSGISLLPPWHAFERAIEYCIVELGAE 248
Query: 128 LMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAY 187
+ + + NLK+DL+ ++P SVP ++E+LY+GI ++ S +RV+ +++ ++
Sbjct: 249 FLVSNINNLKEDLKEFKPTLFPSVPRIWESLYNGIMNKVAKESPIKRVLFDFFLKVGMSW 308
Query: 188 TAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS 247
K I G+ + P ++ L+ L A L PL L A L+++ + A+G
Sbjct: 309 AEKKSILFGYDFRIMRPDP--MLRLLQKLSAFFGLIFLSPLKLGA-ILIFRGVHQALGGR 365
Query: 248 -KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTE 306
+ VS G +LP +D F IG+ V GYG+TE+S V++ R+ G+VG PI E
Sbjct: 366 LRVSVSAGSALPSVVDKFLSGIGLIVLEGYGMTETSAVLSIRKANRPSPGTVGTPIAGYE 425
Query: 307 IKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHH 366
I D ET + G KG + ++ QV+ GY+K P D++G+ +TGDI +
Sbjct: 426 CIIKD-ETGNPVAQGKKGSLWIKSKQVLIGYYKRPELNAVVFDKNGFFDTGDIMRFNYRN 484
Query: 367 SRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGA 426
LV GRAKDTIVL+ GENVEP+ +E+ L S I Q++V G + + A
Sbjct: 485 E----------LVFTGRAKDTIVLAGGENVEPVPVEDQLLNSPYINQVMVTGHEAKHLVA 534
Query: 427 IIVPDKEEV 435
+IVPD E++
Sbjct: 535 LIVPDFEKL 543
>gi|183220510|ref|YP_001838506.1| long-chain acyl-CoA synthetase [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
gi|189910619|ref|YP_001962174.1| long-chain-fatty-acid--CoA ligase [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167775295|gb|ABZ93596.1| Long-chain-fatty-acid--CoA ligase [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167778932|gb|ABZ97230.1| Long-chain acyl-CoA synthetase, AMP-forming (Acyl-CoA synthetase)
[Leptospira biflexa serovar Patoc strain 'Patoc 1
(Paris)']
Length = 639
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 152/445 (34%), Positives = 250/445 (56%), Gaps = 26/445 (5%)
Query: 52 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWH 111
+ + I D +AT +YTSGTTGNPKGVML+ K + I++ + + D +S+LPPWH
Sbjct: 181 RIKQIDPDALATLIYTSGTTGNPKGVMLSQKGWITAIQNTIVRLDMNSNDNAVSLLPPWH 240
Query: 112 VYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSA 171
+ERA Y G++ + + + +LKDDL+ ++P SVP ++E++Y+GI ++
Sbjct: 241 AFERAIEYAGIFLGLDFLISNMTSLKDDLRDFRPTIFPSVPRIWESVYNGIMAKVAKEGG 300
Query: 172 ARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLL 231
+ + +++ + F ++ GF ++P++LV++ +A +I +L PL LL
Sbjct: 301 FKEKLFHFFLKVGATWARFFAMFMGFEF--EIQKPNFLVSICKRTYALVILILLSPLKLL 358
Query: 232 AEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRP 290
+ K ++ I A+G + +S G +LP +D F AIG+KV GYG+TE+S V++ R
Sbjct: 359 SIK-IFSAIHKALGGRIRICISAGSALPSVVDGFLSAIGLKVLEGYGMTETSAVVSIRSN 417
Query: 291 TCNVLGSVGHPINHTEIKIVDAETNEVLPA-GSKGIVKVRGSQVMQGYFKNPSATKQALD 349
T G+VG PI+ I++ D ET +VL G KG + ++ Q+++GY+K P + D
Sbjct: 418 TKPTKGTVGIPIDGYSIRLKD-ETGKVLTKIGEKGTLWIKSKQILKGYYKRPELNQVVFD 476
Query: 350 EDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSS 409
DG+ +TGD+ I+ + LV GR+KDTI L GENVEP+ +E+ L S
Sbjct: 477 ADGFFDTGDLMMISHRNE----------LVFAGRSKDTIALIGGENVEPIPIEDKLLTSP 526
Query: 410 LIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLY-GELRKW 468
I Q++V+G D++ A+IVP+ E V +K I+ A E + + L+ E+ K
Sbjct: 527 YIDQVMVVGHDKKTLAALIVPNFEAV--ESKIQGILKEKAIEWNTNPKVRELFRSEISKI 584
Query: 469 TSK----CSFQIGP---IHVVDEPF 486
S+ SF++ P +VV PF
Sbjct: 585 ISRDNGFKSFEMIPANNFYVVPRPF 609
>gi|224534428|ref|ZP_03675006.1| long-chain-fatty-acid CoA ligase [Borrelia spielmanii A14S]
gi|224514530|gb|EEF84846.1| long-chain-fatty-acid CoA ligase [Borrelia spielmanii A14S]
Length = 630
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 140/418 (33%), Positives = 237/418 (56%), Gaps = 24/418 (5%)
Query: 21 EIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLT 80
+ +++Y + I G RK D+ + S+D+AT +YTSGTTG+PKGVML+
Sbjct: 144 DFEIYTYSDCILFGDNLRK------DSEIIEIASKVDSNDMATIIYTSGTTGHPKGVMLS 197
Query: 81 HKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAV--RNLKD 138
H NLL+Q+ S +V + G F+ +LP WH ++R+ Y IF +G+ +++ + R + +
Sbjct: 198 HANLLYQVSSFSLMVDTQVGQIFMCILPIWHSFQRSFSYNIFLKGMVCLFSTIVPRAMLN 257
Query: 139 DLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFC 198
D++ PHY+ +VP ++ + I K++ R++ ++++F R+ G
Sbjct: 258 DIKNINPHYIAAVPRLWIAIRQNIYKEVSKKPFIFRIIFHFFVKLAFLSDICYRVVMGL- 316
Query: 199 LTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSL 257
N + + I + +IC L+P L L++ KI +G + G++GGGS+
Sbjct: 317 YPDNGFSLFFPIKKILGTFG-LIC--LFPFKALGNILIFNKINKILGNNFVVGITGGGSM 373
Query: 258 PMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEV 317
+ + F+ +IG+++ YGLTE+SP +A+ + ++G+ G + T +I DA+ N++
Sbjct: 374 SLSVVRFFNSIGIELANAYGLTETSPGVASNKHKKVIIGTCGKILPGTVAEIRDADGNKL 433
Query: 318 LPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGV 377
G KGI+ V+G QVM GY+ + AT + + DG+LNTGDI ++ + V
Sbjct: 434 EKPG-KGILFVKGPQVMLGYYNDREATCRIIGSDGFLNTGDIAKLSKDN----------V 482
Query: 378 LVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 435
+ + GR KDTIVL+ GENVEP +E S LI + VV+GQDQ+ GA+I+P+ EE+
Sbjct: 483 VQIIGREKDTIVLNNGENVEPGPIEIKLEESILIEKAVVVGQDQKFLGALILPNFEEI 540
>gi|374586246|ref|ZP_09659338.1| AMP-dependent synthetase and ligase [Leptonema illini DSM 21528]
gi|373875107|gb|EHQ07101.1| AMP-dependent synthetase and ligase [Leptonema illini DSM 21528]
Length = 643
Score = 233 bits (593), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 133/373 (35%), Positives = 222/373 (59%), Gaps = 17/373 (4%)
Query: 61 IATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF 120
+AT +YTSGTTG PKGVML+ K + + + + GD+ LS+LPPWH +ER Y
Sbjct: 188 LATLIYTSGTTGAPKGVMLSQKGWITAVLNTLPRTGFQKGDRALSLLPPWHAFERGVEYA 247
Query: 121 IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARAL 180
+ G+ M + + L+DDL+ ++P SVP ++E++Y+GI ++ SA ++ V A
Sbjct: 248 VVYLGLAFMVSDISCLRDDLKWHRPTIFPSVPRIWESVYNGILAKVKKESALKQAVFNAG 307
Query: 181 IRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKI 240
+ I +Y +K G+ L ++P+ +V++I+ L A + ++ PL L+ L+++ I
Sbjct: 308 LSIGASYNRWKARAFGYRL--QIERPATIVSMIERLAAWCVLLVMGPLRGLS-LLIFRPI 364
Query: 241 QSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVG 299
+ A+G K VSGG +LP +D F AIG+ V GYG+TE+S VI+ R G+VG
Sbjct: 365 RQALGGQIKFSVSGGSALPGVVDRFLSAIGLTVLEGYGMTETSAVISIRNRNRPTPGTVG 424
Query: 300 HPINHTEIKIVDAETNEV--LPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 357
PI I++ + + ++V +P G+KG + V+ Q++ GY++ P + D++G+ +TG
Sbjct: 425 TPIGGYTIRLKNEQGHDVSHIP-GAKGTLWVKSDQILTGYYRRPELNEVVFDKEGFFDTG 483
Query: 358 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 417
D+ + H G L+ GR+KDTI L+ GEN+EP+ +E+ L S I Q++V+
Sbjct: 484 DL-MLLTHR---------GELMFAGRSKDTIALAGGENIEPVPIEDYLLESEFIDQVMVV 533
Query: 418 GQDQRRPGAIIVP 430
G +++ GA+IVP
Sbjct: 534 GDERKTLGALIVP 546
>gi|398346067|ref|ZP_10530770.1| long-chain-fatty-acid--CoA ligase [Leptospira broomii str. 5399]
Length = 644
Score = 232 bits (591), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 148/434 (34%), Positives = 233/434 (53%), Gaps = 24/434 (5%)
Query: 4 IILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIAT 63
+++L+ S + P++ + D++I LG + D + H + E++ D++AT
Sbjct: 141 VVILFEPSSHIGPNL--PFKLLHLDDLISLGD---RWIQDKGEMEFHKRGESVSEDELAT 195
Query: 64 YVYTSGTTGNPKGVMLTHKNLLHQI-RSL-YDIVPAENGDKFLSMLPPWHVYERACGYFI 121
VYTSGTTG PKGVML+HKN+L + SL D + D+ ++ LPPWH+ ER
Sbjct: 196 IVYTSGTTGRPKGVMLSHKNILFNVDMSLSIDDIQFNADDRTMAYLPPWHIAERLIETGC 255
Query: 122 FSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALI 181
G +T++ +L DLQ +P +++SVP V+E+ Y+ I ++ +S R + +
Sbjct: 256 IRIGASEAFTSISSLGQDLQEIRPTFLLSVPRVWESFYNKIHDKLREASPFGRFLFKIFQ 315
Query: 182 RISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQ 241
+ + +K G L ++ S A ++ A L+P +LLA + KI+
Sbjct: 316 GTASTFHKYKSRLLG--LEYMLERISIFREFARRAVALLVVAFLFPANLLA-MTAFSKIR 372
Query: 242 SAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGH 300
+G K +SG G+LP +ID F+ +IG+ + GYG+TE V RR +G++G
Sbjct: 373 KGLGGKLKFALSGAGALPEYIDRFFNSIGIPILEGYGMTELGGVSTRRRLNSITVGTLGR 432
Query: 301 PINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGD-I 359
I EIK++D + E+ G KGI +G VM GY+K+P T + + DGWLN+GD +
Sbjct: 433 CIPGVEIKLIDEQGKEIHEPGVKGIAWHKGPHVMMGYYKDPEKTAEII-VDGWLNSGDLL 491
Query: 360 GWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQ 419
W G L GRAKDTIVL GEN+EP +E A +S LI Q +++G
Sbjct: 492 LWT-----------VQGELKYAGRAKDTIVLLGGENLEPEPIEFALTQSELILQAMIVGH 540
Query: 420 DQRRPGAIIVPDKE 433
D++ A++VPD E
Sbjct: 541 DKKALSALLVPDWE 554
>gi|397689178|ref|YP_006526432.1| Long-chain acyl-CoA synthetase [Melioribacter roseus P3M]
gi|395810670|gb|AFN73419.1| Long-chain acyl-CoA synthetase [Melioribacter roseus P3M]
Length = 607
Score = 231 bits (589), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 164/494 (33%), Positives = 250/494 (50%), Gaps = 62/494 (12%)
Query: 1 MRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDD 60
++F+I++ + S PD V+S+++I+++G+E RK N K E + +
Sbjct: 137 LKFVIVMNNAEKS--PDK----GVYSFEDILNMGKEFRK----ENPGYFKDKSELVEENQ 186
Query: 61 IATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF 120
+ T +YTSGTTG PKGVMLTHKN++ I++ ++I + D FLS LP H++ER GY+
Sbjct: 187 LCTIIYTSGTTGEPKGVMLTHKNIVSNIKAAHEIFDIDETDTFLSFLPLCHIFERMAGYY 246
Query: 121 I-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 178
FS G + Y ++ + ++ +P M +VP ++E +Y+ I++ I + S ++ +
Sbjct: 247 TAFSCGGTIAYAESIEKIASNMLEIRPTIMTAVPRLFERMYTKIKRNIESQSEKKQKIFN 306
Query: 179 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 238
I Y L R QP I L H LA+KLV
Sbjct: 307 WAIETGKEYQ----------LARKSGQP--------------IPVSLTLKHKLADKLVLS 342
Query: 239 KIQSAI-GISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 297
K++ G + +SGG +L + +F+EA G+ + GYGLTESSPVIAA R G+
Sbjct: 343 KLRERTGGRMRFFISGGAALARELGIFFEAAGILIIEGYGLTESSPVIAANRLNDYKFGT 402
Query: 298 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 357
VG P+ E+KI A+ E+L G +MQGY+KN T++ + +DGWL+TG
Sbjct: 403 VGKPMPGVEVKI--AKDGEIL---------AHGPNIMQGYYKNKKETEETI-KDGWLHTG 450
Query: 358 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 417
DIG G L++ R K S G+ V P +E L S I Q V+I
Sbjct: 451 DIGVFDAE----------GFLIITDRKKHLFKTSQGKYVAPTPIESMFLASKYIEQFVII 500
Query: 418 GQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTI-SLLYGELRKWTSKCSF-- 474
G + A+IVPD E + A I + D EL K K I LL EL ++ K S
Sbjct: 501 GDRRMFITALIVPDFEALKEYADANRIQYKDEKELVKMKQIYELLDKELEQFQKKLSSFE 560
Query: 475 QIGPIHVVDEPFTV 488
++ ++D+PFT+
Sbjct: 561 KVRKFTLLDKPFTI 574
>gi|398348947|ref|ZP_10533650.1| long-chain-fatty-acid--CoA ligase [Leptospira broomii str. 5399]
Length = 630
Score = 231 bits (588), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 136/378 (35%), Positives = 208/378 (55%), Gaps = 15/378 (3%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 118
D++AT +YTSGTTG PKGVMLT + + + V + D +S+LPPWH +ERA
Sbjct: 180 DELATLIYTSGTTGAPKGVMLTQTGWISAVEKVIGFVGLTSSDSGISLLPPWHAFERAIE 239
Query: 119 YFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 178
Y I G + + + NLK+DL+ ++P SVP ++E+LY+GI ++ S+ +R +
Sbjct: 240 YCIIELGAAFLVSNINNLKEDLKEFKPTLFPSVPRIWESLYNGIMNKVARESSFKRALFD 299
Query: 179 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 238
+++ ++ K I G+ +P+ +V L+ L A L PL L A L+++
Sbjct: 300 FFLKVGMSWAEKKSILFGYDF--RIMKPNSMVRLMQKLGAFFGLVSLLPLKLGA-ILIFR 356
Query: 239 KIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 297
+ A+G + VS G +LP +D F IG+ V GYG+TE+S V++ R+ G+
Sbjct: 357 GVHQALGGRLRVSVSAGSALPSVVDKFLSGIGLIVLEGYGMTETSAVLSIRKANRPSPGT 416
Query: 298 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 357
VG PI E I D N V G KG + ++ QV+ GY+K P D++G+ +TG
Sbjct: 417 VGTPIAGYECIIKDEAGNPV-AQGKKGSLWIKSKQVLIGYYKRPELNAVVFDKNGFFDTG 475
Query: 358 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 417
DI + LV GRAKDTIVL+ GENVEP+ +E+ L S I Q++V
Sbjct: 476 DIMRFNYRNE----------LVFTGRAKDTIVLAGGENVEPVPVEDQLLNSPYINQVMVT 525
Query: 418 GQDQRRPGAIIVPDKEEV 435
G + + A+IVPD E++
Sbjct: 526 GHEAKHLVALIVPDFEKL 543
>gi|359689012|ref|ZP_09259013.1| long-chain-fatty-acid--CoA ligase [Leptospira licerasiae serovar
Varillal str. MMD0835]
gi|418748800|ref|ZP_13305092.1| AMP-binding enzyme [Leptospira licerasiae str. MMD4847]
gi|418756178|ref|ZP_13312366.1| AMP-binding enzyme [Leptospira licerasiae serovar Varillal str. VAR
010]
gi|384115849|gb|EIE02106.1| AMP-binding enzyme [Leptospira licerasiae serovar Varillal str. VAR
010]
gi|404275869|gb|EJZ43183.1| AMP-binding enzyme [Leptospira licerasiae str. MMD4847]
Length = 630
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 139/381 (36%), Positives = 212/381 (55%), Gaps = 21/381 (5%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 118
+++AT +YTSGTTG PKGVMLT + + + V + D +S+LPPWH +ERA
Sbjct: 180 NELATLIYTSGTTGAPKGVMLTQTGWISAVEKVIGFVQLTSADSGVSLLPPWHAFERAIE 239
Query: 119 YFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 178
Y I G + + + NLK+DL+ +QP SVP ++E+LY+GI ++ S+ +R V
Sbjct: 240 YCILELGAGFLVSNISNLKEDLKEFQPTLFPSVPRIWESLYNGIMNKVSKESSLKRAVFN 299
Query: 179 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLW---ARIICAILWPLHLLAEKL 235
++I + K + G+ K+P+++V W + + ++ L L L
Sbjct: 300 FCLKIGNLWAVQKGVLFGYDF--RIKKPNFIV----WTFSKLSSLVLLTLLSPLKLLALL 353
Query: 236 VYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNV 294
V+K I SA+G + VS G +LP +D F +IG+ V GYG+TE+S V++ R+P
Sbjct: 354 VFKPIHSALGGKLRVSVSAGSALPSVVDKFLSSIGLIVLEGYGMTETSAVLSIRKPKQPS 413
Query: 295 LGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWL 354
G+VG PI E + D N ++P G KG + V+ QV+ GY+K P D++G+
Sbjct: 414 PGTVGTPIQGYECILKDEHGN-IVPQGGKGSLWVKSKQVLMGYYKRPELNDVVFDKNGFF 472
Query: 355 NTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQI 414
+TGDI R R G LV GRAKDTIVL+ GENVEP+ +E+ L S + Q+
Sbjct: 473 DTGDI-------MRFNYR---GELVFAGRAKDTIVLAGGENVEPVPIEDQLLNSPYVNQV 522
Query: 415 VVIGQDQRRPGAIIVPDKEEV 435
+V G + + +IVPD E +
Sbjct: 523 MVTGHEAKHLVVLIVPDFERL 543
>gi|374585933|ref|ZP_09659025.1| AMP-dependent synthetase and ligase [Leptonema illini DSM 21528]
gi|373874794|gb|EHQ06788.1| AMP-dependent synthetase and ligase [Leptonema illini DSM 21528]
Length = 638
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 164/511 (32%), Positives = 257/511 (50%), Gaps = 54/511 (10%)
Query: 1 MRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDD 60
+R IIL G +S ++ V + +E+I A DS + + E + DD
Sbjct: 133 IREIILFSGNAAS------GDLKVRTIEELI-----QSVATDDSLEKEYARRGEAVKPDD 181
Query: 61 IATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDI-----VPAENGDKFLSMLPPWHVYER 115
+AT +YTSGTTG PKGVMLTH ++L ++ +L+ V GD + LPPWH ER
Sbjct: 182 LATIIYTSGTTGVPKGVMLTHGSMLWEVATLHKEFVKTGVTVGRGDITMGFLPPWHSGER 241
Query: 116 ACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 175
F G + +T V L DL+ +P ++ +VP V+E Y I Q+ S+A R
Sbjct: 242 MFETICFYSGAAVAFTTVAELARDLKAIRPTFLFTVPRVWENFYGKILDQLKGSAAFSRF 301
Query: 176 VARALIRISFAYTAFKRIYEGFCLTRNQKQPSY--LVALIDWLWARIICAILWPLHLLAE 233
+ + ++ + ++ R L R + + L L+ A +I L P+ L+A
Sbjct: 302 LFQLFVKTACSF----RAALDTVLDRQVRLTASRSLSELVKIPVAALIVLALLPVALIA- 356
Query: 234 KLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTC 292
+L +KI + +G + +G G+L +D F+ +IG+ + YG+TE+S V R
Sbjct: 357 RLFLRKILAVLGGRVRFAFAGAGALQPEVDRFFHSIGLPLLEVYGMTENSGVSTIRHLNR 416
Query: 293 NVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDG 352
V G+VG P+ EI++V+ + G KG+ RG M+GY++ P T +D +G
Sbjct: 417 FVTGTVGRPLTGVEIRLVNDRKETITEPGIKGVALHRGPHNMKGYYREPEKTAAIIDAEG 476
Query: 353 WLNTGD-IGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLI 411
WLN+GD + W A G L GRAKDTIVLS GENVEP +E + +S
Sbjct: 477 WLNSGDLLMWTAQ-----------GDLKFAGRAKDTIVLSGGENVEPEPIENSLKQSEYF 525
Query: 412 RQIVVIGQDQRRPGAIIVPDKEEVL--------MAAKRLSIVHADASELSKEKTISLLYG 463
+VV+GQD++ GA+IVP +E++L +RL + E++K L+
Sbjct: 526 THVVVVGQDRKTLGALIVPKREKLLPLLNGSAPSDPERLEEALNQSEEIAK-----LVRE 580
Query: 464 ELRKWTS-----KCSFQIGPIHVVDEPFTVN 489
E++K+ S K ++ H++ FTVN
Sbjct: 581 EIKKYVSQETGYKAFERVTTFHILGGDFTVN 611
>gi|456983873|gb|EMG20065.1| AMP-binding enzyme domain protein [Leptospira interrogans serovar
Copenhageni str. LT2050]
Length = 485
Score = 228 bits (581), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 160/465 (34%), Positives = 233/465 (50%), Gaps = 68/465 (14%)
Query: 81 HKNLLHQIRSLYDIVPAE--NGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKD 138
H N++HQ+ + ++ E D LS+LP WH++ER Y S GI+ YT V +L++
Sbjct: 2 HSNMIHQMVYVVPMLLTEIKPTDSMLSILPIWHIFERINEYGAISSGIQTYYTKVADLRN 61
Query: 139 DLQRYQPHYMISVPLVYETLYSGIQKQIF---TSSAARRVVARALIRISFAYTAFKRIYE 195
DL + +P +M P V+E++Y+ I ++ + RRV+ + S Y A +R
Sbjct: 62 DLAKAKPSFMAFAPRVWESVYANIYNKVNDPKQTPPIRRVLFKLAYFFSKHYNASRRFLN 121
Query: 196 GFCLTRNQKQ----------------------------------PSYLVALIDWLWARII 221
G + + P Y + L +WL+ ++
Sbjct: 122 GLEVDYENRNIMKSLVIGIRSLIVLLLTGPFTLSAISILAYLTLPVYGIHLPNWLFFSLV 181
Query: 222 CAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTE 280
L + +V KI++A G KA +SGGG+L H+D F+ IG+ V GYG+TE
Sbjct: 182 GLGLVFNAKTLDTIVLSKIRAATGGRLKASLSGGGALQSHVDNFFNDIGMLVLEGYGMTE 241
Query: 281 SSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETN---------EVLPA--GSKGIVKVR 329
+SPVI+ R ++GSVG + +E+ I D N EVL G KGIV V+
Sbjct: 242 TSPVISVRPFVKPIIGSVGFLVPKSELIIKDENGNVLTHINDQYEVLAGKLGQKGIVFVK 301
Query: 330 GSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIV 389
G QVM+GY+KNP TK+ + DGW+NTGDIG+I L L GRAKDT+V
Sbjct: 302 GPQVMKGYYKNPEVTKKTI-VDGWMNTGDIGFI----------NFKKTLTLTGRAKDTVV 350
Query: 390 LSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADA 449
L GENVEP+ +E S I+Q +VIGQDQ+ GAIIVPD E + + K I +
Sbjct: 351 LLGGENVEPVPIENKMDESPFIKQSMVIGQDQKVLGAIIVPDMEHLGVWCKENGIDSSKI 410
Query: 450 SELSKE-KTISLLYGELRKWTS-KCSF----QIGPIHVVDEPFTV 488
E+ K K I E+R + S K F Q+ + + +PF V
Sbjct: 411 DEIIKNPKVIDFYKKEVRSYNSTKTGFKSFEQVQHVILAKKPFEV 455
>gi|398335017|ref|ZP_10519722.1| long-chain-fatty-acid--CoA ligase [Leptospira kmetyi serovar
Malaysia str. Bejo-Iso9]
Length = 631
Score = 228 bits (580), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 140/408 (34%), Positives = 221/408 (54%), Gaps = 19/408 (4%)
Query: 26 SYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLL 85
S +I GRE K ++ R + K D++AT +YTSGTTG PKGVML +
Sbjct: 151 SVSSLIQSGREYLKKNPNAIRTRLNEK----SPDELATLIYTSGTTGAPKGVMLNQSGWI 206
Query: 86 HQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQP 145
+ + V + D +S+LPPWH +ERA Y + G+ + + + +L+DDL+ ++P
Sbjct: 207 SAVEKVIRFVGLTSKDSGVSLLPPWHAFERAIEYCTVALGVTFLISNITSLRDDLKEFRP 266
Query: 146 HYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQ 205
SVP ++E+LY+GI ++ SA +R + +++ ++ K I G+ ++
Sbjct: 267 TLFPSVPRIWESLYNGIMTKVSKESALKRNLFHFFLKVGMIWSHNKSILFGYDF--QLEK 324
Query: 206 PSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLF 264
P +L L A I +L+PL L A +++ + A+G + VS G +LP +D F
Sbjct: 325 PFFLSQLFKRTIALIKLVLLFPLKLGAIG-IFQSVHKALGGRLRVSVSAGSALPSVVDKF 383
Query: 265 YEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGS-K 323
AIG+ V GYG+TE+S V + R P G+VG P++ E ++ D VL S K
Sbjct: 384 LSAIGLIVLEGYGMTETSAVTSIRDPHRPSSGTVGIPVDGYEYRLKDERGGFVLNGHSQK 443
Query: 324 GIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGR 383
G + ++ Q++ GY+K P + D++G+ +TGDI I + RG L GR
Sbjct: 444 GTLWLKSKQILMGYYKRPELNEVVFDKEGFFDTGDIMRI---NYRGE-------LSFAGR 493
Query: 384 AKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPD 431
AKDTIVL+ GENVEP+ +E+ L S I Q++V G + + +IVPD
Sbjct: 494 AKDTIVLAGGENVEPVPIEDQLLNSPYINQVMVTGHESKHLVVLIVPD 541
>gi|417782916|ref|ZP_12430639.1| AMP-binding enzyme [Leptospira interrogans str. C10069]
gi|418733600|ref|ZP_13290724.1| AMP-binding enzyme [Leptospira interrogans str. UI 12758]
gi|409953617|gb|EKO08113.1| AMP-binding enzyme [Leptospira interrogans str. C10069]
gi|410773209|gb|EKR53240.1| AMP-binding enzyme [Leptospira interrogans str. UI 12758]
Length = 624
Score = 227 bits (579), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 139/458 (30%), Positives = 234/458 (51%), Gaps = 20/458 (4%)
Query: 36 ESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIV 95
E K+ D + E++G D+AT +YTSGTTG PKGVML H++ I + + +
Sbjct: 146 EGEKSRIKKGDKTYDQRGESLGGKDLATIIYTSGTTGAPKGVMLNHRSFTWGIHQIQEFI 205
Query: 96 PAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVY 155
P D+ + LPPWH+ ER + + G + +++ + D+Q+ +P ++SVP ++
Sbjct: 206 PGSYNDRTILFLPPWHIAERLLETTLIAWGASMACSSIPTIPADMQKVKPTVLVSVPRLW 265
Query: 156 ETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDW 215
E LY I + SS ++ + ++++ T+ + T + P+ L+D
Sbjct: 266 EGLYKRIYDTVRKSSPFKQKLFHFAVKMAEITTSLQDTIRDSYATTETENPNQ--KLLDR 323
Query: 216 LWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVG 275
A + L P+ +L+ K++ + G + + G G++P HI F+ + G+ +
Sbjct: 324 FIASVFLLSLVPIKILSNKILERVRNLFGGKIRFALCGAGAMPSHIQFFFRSAGIHIIET 383
Query: 276 YGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQ 335
YG+TE++ + A G++G P+ T IK+V V G KG+ +G V
Sbjct: 384 YGMTETTGIGAIGEFPIPKNGAIGAPLPGTAIKLVGENGKVVTTPGEKGVAWHKGPHVTM 443
Query: 336 GYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGEN 395
GY+K P T +AL +DGWL++GDI + H+ G L GRAKDTIVLS GEN
Sbjct: 444 GYYKEPEKTSKAL-QDGWLDSGDI--LTWTHT--------GELKFAGRAKDTIVLSGGEN 492
Query: 396 VEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI-VHADASELSK 454
+EP +E S I Q++V+GQDQ+ G +IVP + V + ++ + D +E S
Sbjct: 493 LEPAPIEAKLTESEFINQVIVVGQDQKNLGVLIVPFFDRVQEEFQNQAVKIPKDPTEWSS 552
Query: 455 EKTISLLYGEL--RKWTSKCSF----QIGPIHVVDEPF 486
K I+ + + K ++K F +I IH++ + F
Sbjct: 553 SKEITTFFKNIVKDKISTKAGFKSFEKIAHIHILSKEF 590
>gi|417760957|ref|ZP_12408971.1| AMP-binding enzyme [Leptospira interrogans str. 2002000624]
gi|417773540|ref|ZP_12421417.1| AMP-binding enzyme [Leptospira interrogans str. 2002000621]
gi|418667876|ref|ZP_13229281.1| AMP-binding enzyme [Leptospira interrogans serovar Pyrogenes str.
2006006960]
gi|409942951|gb|EKN88554.1| AMP-binding enzyme [Leptospira interrogans str. 2002000624]
gi|410576628|gb|EKQ39633.1| AMP-binding enzyme [Leptospira interrogans str. 2002000621]
gi|410756321|gb|EKR17946.1| AMP-binding enzyme [Leptospira interrogans serovar Pyrogenes str.
2006006960]
gi|455790425|gb|EMF42291.1| AMP-binding enzyme [Leptospira interrogans serovar Lora str. TE
1992]
Length = 624
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 138/458 (30%), Positives = 234/458 (51%), Gaps = 20/458 (4%)
Query: 36 ESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIV 95
E K+ D + E++G D+AT +YTSGTTG PKGVML H++ I + + +
Sbjct: 146 EGEKSRIKKGDKTYDQRGESLGGKDLATIIYTSGTTGAPKGVMLNHRSFTWGIHQIQEFI 205
Query: 96 PAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVY 155
P D+ + LPPWH+ ER + + G + +++ + D+Q+ +P ++SVP ++
Sbjct: 206 PGSYNDRTILFLPPWHIAERLLETTLIAWGASMACSSIPTIPADMQKVKPTVLVSVPRLW 265
Query: 156 ETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDW 215
E LY I + SS ++ + ++++ T+ + T + P+ L+D
Sbjct: 266 EGLYKRIYDTVRKSSPFKQKLFHFAVKMAEITTSLQDTIRDSYATTETENPNQ--KLLDR 323
Query: 216 LWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVG 275
A + L P+ +L+ K++ + G + + G G++P HI F+ + G+ +
Sbjct: 324 FIASVFLLSLVPIKILSNKILERVRNLFGGKIRFALCGAGAMPSHIQFFFRSAGIHIIET 383
Query: 276 YGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQ 335
YG+TE++ + A G++G P+ T IK+V V G KG+ +G V
Sbjct: 384 YGMTETTGIGAIGEFPIPKNGAIGAPLPGTAIKLVGENGKVVTTPGEKGVAWHKGPHVTM 443
Query: 336 GYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGEN 395
GY+K P T +AL +DGWL++GDI + H+ G L GRAKDTIVLS GEN
Sbjct: 444 GYYKEPEKTSKAL-QDGWLDSGDI--LTWTHT--------GELKFAGRAKDTIVLSGGEN 492
Query: 396 VEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI-VHADASELSK 454
+EP +E S I Q++V+GQDQ+ G +IVP + V + ++ + D +E S
Sbjct: 493 LEPAPIEAKLTESEFINQVIVVGQDQKNLGVLIVPFFDRVQEEFQNQAVKIPKDPTEWSS 552
Query: 455 EKTISLLYGEL--RKWTSKCSF----QIGPIHVVDEPF 486
K I+ + + K ++K F +I +H++ + F
Sbjct: 553 SKEITTFFKNIVKDKISTKAGFKSFEKIAHVHILSKEF 590
>gi|417763927|ref|ZP_12411900.1| AMP-binding enzyme [Leptospira interrogans serovar Bulgarica str.
Mallika]
gi|400353759|gb|EJP05912.1| AMP-binding enzyme [Leptospira interrogans serovar Bulgarica str.
Mallika]
gi|456821587|gb|EMF70093.1| AMP-binding enzyme [Leptospira interrogans serovar Canicola str.
LT1962]
Length = 624
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 138/458 (30%), Positives = 234/458 (51%), Gaps = 20/458 (4%)
Query: 36 ESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIV 95
E K+ D + E++G D+AT +YTSGTTG PKGVML H++ I + + +
Sbjct: 146 EGEKSRIKKGDKTYDQRGESLGGKDLATIIYTSGTTGAPKGVMLNHRSFTWGIHQIQEFI 205
Query: 96 PAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVY 155
P D+ + LPPWH+ ER + + G + +++ + D+Q+ +P ++SVP ++
Sbjct: 206 PGSYNDRTILFLPPWHIAERLLETTLIAWGASMACSSIPTIPADMQKVKPTVLVSVPRLW 265
Query: 156 ETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDW 215
E LY I + SS ++ + ++++ T+ + T + P+ L+D
Sbjct: 266 EGLYKRIYDTVRKSSPFKQKLFHFAVKMAEITTSLQDTIRDSYATTETENPNQ--KLLDR 323
Query: 216 LWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVG 275
A + L P+ +L+ K++ + G + + G G++P HI F+ + G+ +
Sbjct: 324 FIASVFLLSLVPIKILSNKILERVRNLFGGKIRFALCGAGAMPSHIQFFFRSAGIHIIET 383
Query: 276 YGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQ 335
YG+TE++ + A G++G P+ T IK+V V G KG+ +G V
Sbjct: 384 YGMTETTGIGAIGEFPIPKNGAIGAPLPGTAIKLVGENGKVVTTPGEKGVAWHKGPHVTM 443
Query: 336 GYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGEN 395
GY+K P T +AL +DGWL++GDI + H+ G L GRAKDTIVLS GEN
Sbjct: 444 GYYKEPEKTSKAL-QDGWLDSGDI--LTWTHT--------GELKFAGRAKDTIVLSGGEN 492
Query: 396 VEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI-VHADASELSK 454
+EP +E S I Q++V+GQDQ+ G +IVP + V + ++ + D +E S
Sbjct: 493 LEPAPIEAKLTESEFINQVIVVGQDQKNLGVLIVPFFDRVQEEFQNQAVKIPKDPTEWSS 552
Query: 455 EKTISLLYGEL--RKWTSKCSF----QIGPIHVVDEPF 486
K ++ + + K ++K F +I IH++ + F
Sbjct: 553 SKEVTTFFKNIVKDKISTKAGFKSFEKIAHIHILSKEF 590
>gi|421121176|ref|ZP_15581475.1| AMP-binding enzyme [Leptospira interrogans str. Brem 329]
gi|410346004|gb|EKO97048.1| AMP-binding enzyme [Leptospira interrogans str. Brem 329]
Length = 624
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 138/458 (30%), Positives = 234/458 (51%), Gaps = 20/458 (4%)
Query: 36 ESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIV 95
E K+ D + E++G D+AT +YTSGTTG PKGVML H++ I + + +
Sbjct: 146 EGEKSRIKKGDKTYDQRGESLGGKDLATIIYTSGTTGAPKGVMLNHRSFTWGIHQIQEFI 205
Query: 96 PAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVY 155
P D+ + LPPWH+ ER + + G + +++ + D+Q+ +P ++SVP ++
Sbjct: 206 PGSYNDRTILFLPPWHIAERLLETTLIAWGASMACSSIPTIPADMQKVKPTVLVSVPRLW 265
Query: 156 ETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDW 215
E LY I + SS ++ + ++++ T+ + T + P+ L+D
Sbjct: 266 EGLYKRIYDTVRKSSPFKQKLFHFAVKMAEITTSLQDTIRDSYATTETENPNQ--KLLDR 323
Query: 216 LWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVG 275
A + L P+ +L+ K++ + G + + G G++P HI F+ + G+ +
Sbjct: 324 FIASVFLLSLVPIKILSNKILERVRNLFGGKIRFALCGAGAMPSHIQFFFRSAGIHIIET 383
Query: 276 YGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQ 335
YG+TE++ + A G++G P+ T IK+V V G KG+ +G V
Sbjct: 384 YGMTETTGIGAIGEFPIPKNGAIGAPLPGTAIKLVGENGKVVTTPGEKGVAWHKGPHVTM 443
Query: 336 GYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGEN 395
GY+K P T +AL +DGWL++GDI + H+ G L GRAKDTIVLS GEN
Sbjct: 444 GYYKEPEKTSKAL-QDGWLDSGDI--LTWTHT--------GELKFAGRAKDTIVLSGGEN 492
Query: 396 VEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI-VHADASELSK 454
+EP +E S I Q++V+GQDQ+ G +IVP + V + ++ + D +E S
Sbjct: 493 LEPAPIEAKLTESEFINQVIVVGQDQKNLGVLIVPFFDRVQEEFQNQAVKIPKDPTEWSS 552
Query: 455 EKTISLLYGEL--RKWTSKCSF----QIGPIHVVDEPF 486
K I+ + + K ++K F +I +H++ + F
Sbjct: 553 SKEITTFFKNIVKDKISTKAGFKSFEKIAHVHILSKEF 590
>gi|418672585|ref|ZP_13233921.1| AMP-binding enzyme [Leptospira interrogans str. 2002000623]
gi|410580273|gb|EKQ48098.1| AMP-binding enzyme [Leptospira interrogans str. 2002000623]
Length = 645
Score = 226 bits (577), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 138/458 (30%), Positives = 234/458 (51%), Gaps = 20/458 (4%)
Query: 36 ESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIV 95
E K+ D + E++G D+AT +YTSGTTG PKGVML H++ I + + +
Sbjct: 167 EGEKSRIKKGDKTYDQRGESLGGKDLATIIYTSGTTGAPKGVMLNHRSFTWGIHQIQEFI 226
Query: 96 PAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVY 155
P D+ + LPPWH+ ER + + G + +++ + D+Q+ +P ++SVP ++
Sbjct: 227 PGSYNDRTILFLPPWHIAERLLETTLIAWGASMACSSIPTIPADMQKVKPTVLVSVPRLW 286
Query: 156 ETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDW 215
E LY I + SS ++ + ++++ T+ + T + P+ L+D
Sbjct: 287 EGLYKRIYDTVRKSSPFKQKLFHFAVKMAEITTSLQDTIRDSYATTETENPNQ--KLLDR 344
Query: 216 LWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVG 275
A + L P+ +L+ K++ + G + + G G++P HI F+ + G+ +
Sbjct: 345 FIASVFLLSLVPIKILSNKILERVRNLFGGKIRFALCGAGAMPSHIQFFFRSAGIHIIET 404
Query: 276 YGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQ 335
YG+TE++ + A G++G P+ T IK+V V G KG+ +G V
Sbjct: 405 YGMTETTGIGAIGEFPIPKNGAIGAPLPGTAIKLVGENGKVVTTPGEKGVAWHKGPHVTM 464
Query: 336 GYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGEN 395
GY+K P T +AL +DGWL++GDI + H+ G L GRAKDTIVLS GEN
Sbjct: 465 GYYKEPEKTSKAL-QDGWLDSGDI--LTWTHT--------GELKFAGRAKDTIVLSGGEN 513
Query: 396 VEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI-VHADASELSK 454
+EP +E S I Q++V+GQDQ+ G +IVP + V + ++ + D +E S
Sbjct: 514 LEPAPIEAKLTESEFINQVIVVGQDQKNLGVLIVPFFDRVQEEFQNQAVKIPKDPTEWSS 573
Query: 455 EKTISLLYGEL--RKWTSKCSF----QIGPIHVVDEPF 486
K I+ + + K ++K F +I +H++ + F
Sbjct: 574 SKEITTFFKNIVKDKISTKAGFKSFEKIAHVHILSKEF 611
>gi|24214877|ref|NP_712358.1| long-chain-fatty-acid CoA ligase [Leptospira interrogans serovar
Lai str. 56601]
gi|386074235|ref|YP_005988552.1| long-chain-fatty-acid CoA ligase [Leptospira interrogans serovar
Lai str. IPAV]
gi|24195898|gb|AAN49376.1|AE011388_7 long-chain-fatty-acid CoA ligase [Leptospira interrogans serovar
Lai str. 56601]
gi|353458024|gb|AER02569.1| long-chain-fatty-acid CoA ligase [Leptospira interrogans serovar
Lai str. IPAV]
Length = 645
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 137/458 (29%), Positives = 234/458 (51%), Gaps = 20/458 (4%)
Query: 36 ESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIV 95
E K+ D + E++G D+AT +YTSGTTG PKGVML H++ I + + +
Sbjct: 167 EGEKSRIKKGDKTYDQRGESLGGKDLATIIYTSGTTGAPKGVMLNHRSFTWGIHQIQEFI 226
Query: 96 PAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVY 155
P D+ + LPPWH+ ER + + G + +++ + D+Q+ +P ++SVP ++
Sbjct: 227 PGSYNDRTILFLPPWHIAERLLETTLIAWGASMACSSIPTIPADMQKVKPTVLVSVPRLW 286
Query: 156 ETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDW 215
E LY I + SS ++ + ++++ T+ + T + P+ L+D
Sbjct: 287 EGLYKRIYDTVRKSSPFKQKLFHFAVKMAEITTSLQDTIRDSYATTETENPNQ--KLLDR 344
Query: 216 LWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVG 275
A + L P+ +L+ K++ + G + + G G++P HI F+ + G+ +
Sbjct: 345 FIASVFLLSLVPIKILSNKILERVRNLFGGKIRFALCGAGAMPSHIQFFFRSTGIHIIET 404
Query: 276 YGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQ 335
YG+TE++ + A G++G P+ T IK+V V G KG+ +G V
Sbjct: 405 YGMTETTGIGAIGEFPIPKNGAIGAPLPGTAIKLVGENGKVVTTPGEKGVAWHKGPHVTM 464
Query: 336 GYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGEN 395
GY+K P T +AL +DGWL++GDI + H+ G L GRAKDTIVLS GEN
Sbjct: 465 GYYKEPEKTSKAL-QDGWLDSGDI--LTWTHT--------GELKFAGRAKDTIVLSGGEN 513
Query: 396 VEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI-VHADASELSK 454
+EP +E S I Q++V+GQDQ+ G +IVP + V + ++ + D +E S
Sbjct: 514 LEPAPIEAKLTESEFINQVIVVGQDQKNLGVLIVPFFDRVQEEFQNQAVKIPKDPTEWSS 573
Query: 455 EKTISLLYGEL--RKWTSKCSF----QIGPIHVVDEPF 486
K ++ + + K ++K F +I +H++ + F
Sbjct: 574 SKEVTTFFKNIVKDKISTKAGFKSFEKIAHVHILSKEF 611
>gi|421123940|ref|ZP_15584210.1| AMP-binding enzyme [Leptospira interrogans serovar Grippotyphosa
str. 2006006986]
gi|421134660|ref|ZP_15594793.1| AMP-binding enzyme [Leptospira interrogans serovar Grippotyphosa
str. Andaman]
gi|410021244|gb|EKO88036.1| AMP-binding enzyme [Leptospira interrogans serovar Grippotyphosa
str. Andaman]
gi|410438427|gb|EKP87513.1| AMP-binding enzyme [Leptospira interrogans serovar Grippotyphosa
str. 2006006986]
Length = 645
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 138/458 (30%), Positives = 234/458 (51%), Gaps = 20/458 (4%)
Query: 36 ESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIV 95
E K+ D + E++G D+AT +YTSGTTG PKGVML H++ I + + +
Sbjct: 167 EGEKSRIKKGDKTYDQRGESLGGKDLATIIYTSGTTGAPKGVMLNHRSFTWGIHQIQEFI 226
Query: 96 PAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVY 155
P D+ + LPPWH+ ER + + G + +++ + D+Q+ +P ++SVP ++
Sbjct: 227 PGSYNDRTILFLPPWHIAERLLETTLIAWGASMACSSIPTIPADMQKVKPTVLVSVPRLW 286
Query: 156 ETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDW 215
E LY I + SS ++ + ++++ T+ + T + P+ L+D
Sbjct: 287 EGLYKRIYDTVRKSSPFKQKLFHFAVKMAEITTSLQDTIRDSYATTETENPNQ--KLLDR 344
Query: 216 LWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVG 275
A + L P+ +L+ K++ + G + + G G++P HI F+ + G+ +
Sbjct: 345 FIASVFLLSLVPIKILSNKILERVRNLFGGKIRFALCGAGAMPSHIQFFFRSAGIHIIET 404
Query: 276 YGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQ 335
YG+TE++ + A G++G P+ T IK+V V G KG+ +G V
Sbjct: 405 YGMTETTGIGAIGEFPIPKNGAIGAPLPGTAIKLVGENGKVVTTPGEKGVAWHKGPHVTM 464
Query: 336 GYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGEN 395
GY+K P T +AL +DGWL++GDI + H+ G L GRAKDTIVLS GEN
Sbjct: 465 GYYKEPEKTSKAL-QDGWLDSGDI--LTWTHT--------GELKFAGRAKDTIVLSGGEN 513
Query: 396 VEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI-VHADASELSK 454
+EP +E S I Q++V+GQDQ+ G +IVP + V + ++ + D +E S
Sbjct: 514 LEPAPIEAKLTESEFINQVIVVGQDQKNLGVLIVPFFDRVQEEFQNQAVKIPKDPTEWSS 573
Query: 455 EKTISLLYGEL--RKWTSKCSF----QIGPIHVVDEPF 486
K I+ + + K ++K F +I +H++ + F
Sbjct: 574 SKEITTFFKNIVKDKISTKAGFKSFEKIAHVHILSKEF 611
>gi|418717905|ref|ZP_13277444.1| AMP-binding enzyme [Leptospira interrogans str. UI 08452]
gi|410786778|gb|EKR80516.1| AMP-binding enzyme [Leptospira interrogans str. UI 08452]
Length = 624
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 138/458 (30%), Positives = 234/458 (51%), Gaps = 20/458 (4%)
Query: 36 ESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIV 95
E K+ D + E++G D+AT +YTSGTTG PKGVML H++ I + + +
Sbjct: 146 EGEKSRIKKGDKTYDQRGESLGGKDLATIIYTSGTTGAPKGVMLNHRSFTWGIHQIQEFI 205
Query: 96 PAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVY 155
P D+ + LPPWH+ ER + + G + +++ + D+Q+ +P ++SVP ++
Sbjct: 206 PGSYNDRTILFLPPWHIAERLLETTLIAWGASMACSSIPTIPADMQKVKPTVLVSVPRLW 265
Query: 156 ETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDW 215
E LY I + SS ++ + ++++ T+ + T + P+ L+D
Sbjct: 266 EGLYKRIYDTVRKSSPFKQKLFHFAVKMAEITTSLQDTIRDSYATTETENPNQ--KLLDR 323
Query: 216 LWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVG 275
A + L P+ +L+ K++ + G + + G G++P HI F+ + G+++
Sbjct: 324 FIASVFLLSLVPIKILSNKILERVRNLFGGKIRFALCGAGAMPSHIQFFFRSAGIRIIET 383
Query: 276 YGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQ 335
YG+TE++ + A G++G P+ T IK+V V G KG+ +G V
Sbjct: 384 YGMTETTGIGAIGEFPIPKNGAIGAPLPGTAIKLVGENGKVVTTPGEKGVAWHKGPHVTM 443
Query: 336 GYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGEN 395
GY+K P T +AL +DGWL++GDI + H+ G L GRAKDTIVLS GEN
Sbjct: 444 GYYKEPEKTSKAL-QDGWLDSGDI--LTWTHT--------GELKFAGRAKDTIVLSGGEN 492
Query: 396 VEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI-VHADASELSK 454
+EP +E S I Q++V+GQDQ+ G +IVP + V + ++ + D +E S
Sbjct: 493 LEPAPIEAKLTESEFINQVIVVGQDQKNLGVLIVPFFDRVQEEFQNQAVKIPKDPTEWSS 552
Query: 455 EKTISLLYGEL--RKWTSKCSF----QIGPIHVVDEPF 486
K I + + K ++K F +I +H++ + F
Sbjct: 553 SKEIITFFKNIVKDKISTKAGFKSFEKIAHVHILSKEF 590
>gi|418710926|ref|ZP_13271692.1| AMP-binding enzyme [Leptospira interrogans serovar Grippotyphosa
str. UI 08368]
gi|418726527|ref|ZP_13285138.1| AMP-binding enzyme [Leptospira interrogans str. UI 12621]
gi|421085633|ref|ZP_15546484.1| AMP-binding enzyme [Leptospira santarosai str. HAI1594]
gi|421102363|ref|ZP_15562967.1| AMP-binding enzyme [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|409960437|gb|EKO24191.1| AMP-binding enzyme [Leptospira interrogans str. UI 12621]
gi|410367477|gb|EKP22861.1| AMP-binding enzyme [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|410431198|gb|EKP75558.1| AMP-binding enzyme [Leptospira santarosai str. HAI1594]
gi|410768526|gb|EKR43773.1| AMP-binding enzyme [Leptospira interrogans serovar Grippotyphosa
str. UI 08368]
Length = 624
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 137/458 (29%), Positives = 234/458 (51%), Gaps = 20/458 (4%)
Query: 36 ESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIV 95
E K+ D + E++G D+AT +YTSGTTG PKGVML H++ I + + +
Sbjct: 146 EGEKSRIKKGDKTYDQRGESLGGKDLATIIYTSGTTGAPKGVMLNHRSFTWGIHQIQEFI 205
Query: 96 PAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVY 155
P D+ + LPPWH+ ER + + G + +++ + D+Q+ +P ++SVP ++
Sbjct: 206 PGSYNDRTILFLPPWHIAERLLETTLIAWGASMACSSIPTIPADMQKVKPTVLVSVPRLW 265
Query: 156 ETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDW 215
E LY I + SS ++ + ++++ T+ + T + P+ L+D
Sbjct: 266 EGLYKRIYDTVRKSSPFKQKLFHFAVKMAEITTSLQDTIRDSYATTETENPNQ--KLLDR 323
Query: 216 LWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVG 275
A + L P+ +L+ K++ + G + + G G++P HI F+ + G+ +
Sbjct: 324 FIASVFLLSLVPIKILSNKILERVRNLFGGKIRFALCGAGAMPSHIQFFFRSAGIHIIET 383
Query: 276 YGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQ 335
YG+TE++ + A G++G P+ T IK+V V G KG+ +G V
Sbjct: 384 YGMTETTGIGAIGEFPIPKNGAIGAPLPGTAIKLVGENGKVVTTPGEKGVAWHKGPHVTM 443
Query: 336 GYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGEN 395
GY+K P T +AL +DGWL++GDI + H+ G L GRAKDTIVLS GEN
Sbjct: 444 GYYKEPEKTSKAL-QDGWLDSGDI--LTWTHT--------GELKFAGRAKDTIVLSGGEN 492
Query: 396 VEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI-VHADASELSK 454
+EP +E S I Q++V+GQDQ+ G +IVP + V + ++ + D +E S
Sbjct: 493 LEPAPIEAKLTESEFINQVIVVGQDQKNLGVLIVPFFDRVQEEFQNQAVKIPKDPTEWSS 552
Query: 455 EKTISLLYGEL--RKWTSKCSF----QIGPIHVVDEPF 486
K ++ + + K ++K F +I +H++ + F
Sbjct: 553 SKEVTTFFKNIVKDKISTKAGFKSFEKIAHVHILSKEF 590
>gi|45657613|ref|YP_001699.1| long-chain-fatty-acid CoA ligase [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|45600853|gb|AAS70336.1| long-chain-fatty-acid CoA ligase [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
Length = 645
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 137/458 (29%), Positives = 234/458 (51%), Gaps = 20/458 (4%)
Query: 36 ESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIV 95
E K+ D + E++G D+AT +YTSGTTG PKGVML H++ I + + +
Sbjct: 167 EGEKSRIKKGDKTYDQRGESLGGKDLATIIYTSGTTGAPKGVMLNHRSFTWGIHQIQEFI 226
Query: 96 PAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVY 155
P D+ + LPPWH+ ER + + G + +++ + D+Q+ +P ++SVP ++
Sbjct: 227 PGSYNDRTILFLPPWHIAERLLETTLIAWGASMACSSIPTIPADMQKVKPTVLVSVPRLW 286
Query: 156 ETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDW 215
E LY I + SS ++ + ++++ T+ + T + P+ L+D
Sbjct: 287 EGLYKRIYDTVRKSSPFKQKLFHFAVKMAEITTSLQDTIRDSYATTETENPNQ--KLLDR 344
Query: 216 LWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVG 275
A + L P+ +L+ K++ + G + + G G++P HI F+ + G+ +
Sbjct: 345 FIASVFLLSLVPIKILSNKILERVRNLFGGKIRFALCGAGAMPSHIQFFFRSAGIHIIET 404
Query: 276 YGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQ 335
YG+TE++ + A G++G P+ T IK+V V G KG+ +G V
Sbjct: 405 YGMTETTGIGAIGEFPIPKNGAIGAPLPGTAIKLVGENGKVVTTPGEKGVAWHKGPHVTM 464
Query: 336 GYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGEN 395
GY+K P T +AL +DGWL++GDI + H+ G L GRAKDTIVLS GEN
Sbjct: 465 GYYKEPEKTSKAL-QDGWLDSGDI--LTWTHT--------GELKFAGRAKDTIVLSGGEN 513
Query: 396 VEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI-VHADASELSK 454
+EP +E S I Q++V+GQDQ+ G +IVP + V + ++ + D +E S
Sbjct: 514 LEPAPIEAKLTESEFINQVIVVGQDQKNLGVLIVPFFDRVQEEFQNQAVKIPKDPTEWSS 573
Query: 455 EKTISLLYGEL--RKWTSKCSF----QIGPIHVVDEPF 486
K ++ + + K ++K F +I +H++ + F
Sbjct: 574 SKEVTTFFKNIVKDKISTKAGFKSFEKIAHVHILSKEF 611
>gi|418703539|ref|ZP_13264423.1| AMP-binding enzyme [Leptospira interrogans serovar Hebdomadis str.
R499]
gi|421116782|ref|ZP_15577157.1| AMP-binding enzyme [Leptospira interrogans serovar Canicola str.
Fiocruz LV133]
gi|410011592|gb|EKO69708.1| AMP-binding enzyme [Leptospira interrogans serovar Canicola str.
Fiocruz LV133]
gi|410766675|gb|EKR37358.1| AMP-binding enzyme [Leptospira interrogans serovar Hebdomadis str.
R499]
Length = 624
Score = 226 bits (575), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 138/458 (30%), Positives = 233/458 (50%), Gaps = 20/458 (4%)
Query: 36 ESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIV 95
E K+ D + E++G D+AT +YTSGTTG PKGVML H++ I + + +
Sbjct: 146 EGEKSRIKKGDKTYDQRGESLGGKDLATIIYTSGTTGAPKGVMLNHRSFTWGIHQIQEFI 205
Query: 96 PAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVY 155
P D+ + LPPWH+ ER + + G + +++ + D+Q+ +P ++SVP ++
Sbjct: 206 PGSYNDRTILFLPPWHIAERLLETTLIAWGASMACSSIPTIPADMQKVKPTVLVSVPRLW 265
Query: 156 ETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDW 215
E LY I + SS ++ + ++++ T+ + T + P+ L+D
Sbjct: 266 EGLYKRIYDTVRKSSPFKQKLFHFAVKMAEITTSLQDTIRDSYATTETENPNQ--KLLDR 323
Query: 216 LWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVG 275
A + L P+ +L+ K++ + G + + G G++P HI F+ + G+ +
Sbjct: 324 FIASVFLLSLVPIKILSNKILERVRNLFGGKIRFALCGAGAMPSHIQFFFRSAGIHIIET 383
Query: 276 YGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQ 335
YG+TE++ + A G++G P+ T IK+V V G KG+ +G V
Sbjct: 384 YGMTETTGIGAIGEFPIPKNGAIGAPLPGTAIKLVGENGKVVTTPGEKGVAWHKGPHVTM 443
Query: 336 GYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGEN 395
GY+K P T +AL +DGWL++GDI + H+ G L GRAKDTIVLS GEN
Sbjct: 444 GYYKEPEKTSKAL-QDGWLDSGDI--LTWTHT--------GELKFAGRAKDTIVLSGGEN 492
Query: 396 VEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI-VHADASELSK 454
+EP +E S I Q++V+GQDQ+ G +IVP + V + ++ + D +E S
Sbjct: 493 LEPAPIEAKLTESEFINQVIVVGQDQKNLGVLIVPFFDRVQEEFQNQAVKIPKDPTEWSS 552
Query: 455 EKTISLLYGEL--RKWTSKCSF----QIGPIHVVDEPF 486
K I + + K ++K F +I +H++ + F
Sbjct: 553 SKEIITFFKNIVKDKISTKAGFKSFEKIAHVHILSKEF 590
>gi|418692332|ref|ZP_13253410.1| AMP-binding enzyme [Leptospira interrogans str. FPW2026]
gi|400357565|gb|EJP13685.1| AMP-binding enzyme [Leptospira interrogans str. FPW2026]
Length = 624
Score = 225 bits (573), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 137/458 (29%), Positives = 233/458 (50%), Gaps = 20/458 (4%)
Query: 36 ESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIV 95
E K+ D + E++G D+AT +YTSGTTG PKGVML H++ I + + +
Sbjct: 146 EGEKSRIKKGDKTYDQRGESLGGKDLATIIYTSGTTGAPKGVMLNHRSFTWGIHQIQEFI 205
Query: 96 PAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVY 155
P D+ + LPPWH+ ER + + G + +++ + D+Q+ +P ++SVP ++
Sbjct: 206 PGSYNDRTILFLPPWHIAERLLETTLIAWGASMACSSIPTIPADMQKVKPTVLVSVPRLW 265
Query: 156 ETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDW 215
E LY I + SS ++ + ++++ T+ + T + P+ L+D
Sbjct: 266 EGLYKRIYDTVRKSSPFKQKLFHFAVKMAEITTSLQDTIRDSYATTETENPNQ--KLLDR 323
Query: 216 LWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVG 275
A + L P+ +L+ K++ + G + + G G +P HI F+ + G+ +
Sbjct: 324 FIASVFLLSLVPIKILSNKILERVRNLFGGKIRFALCGAGVMPSHIQFFFRSAGIHIIET 383
Query: 276 YGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQ 335
YG+TE++ + A G++G P+ T IK+V V G KG+ +G V
Sbjct: 384 YGMTETTGIGAIGEFPIPKNGAIGAPLPGTAIKLVGENGKVVTTPGEKGVAWHKGPHVTM 443
Query: 336 GYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGEN 395
GY+K P T +AL +DGWL++GDI + H+ G L GRAKDTIVLS GEN
Sbjct: 444 GYYKEPEKTSKAL-QDGWLDSGDI--LTWTHT--------GELKFAGRAKDTIVLSGGEN 492
Query: 396 VEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI-VHADASELSK 454
+EP +E S I Q++V+GQDQ+ G +IVP + V + ++ + D +E S
Sbjct: 493 LEPAPIEAKLTESEFINQVIVVGQDQKNLGVLIVPFFDRVQEEFQNQAVKIPKDPTEWSS 552
Query: 455 EKTISLLYGEL--RKWTSKCSF----QIGPIHVVDEPF 486
K ++ + + K ++K F +I +H++ + F
Sbjct: 553 SKEVTTFFKNIVKDKISTKAGFKSFEKIAHVHILSKEF 590
>gi|418701054|ref|ZP_13261989.1| AMP-binding enzyme [Leptospira interrogans serovar Bataviae str.
L1111]
gi|410759952|gb|EKR26154.1| AMP-binding enzyme [Leptospira interrogans serovar Bataviae str.
L1111]
Length = 624
Score = 225 bits (573), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 137/458 (29%), Positives = 234/458 (51%), Gaps = 20/458 (4%)
Query: 36 ESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIV 95
E K+ D + E++G D+AT +YTSGTTG PKGVML H++ I + + +
Sbjct: 146 EGEKSRIKKGDKTYDQRGESLGGKDLATIIYTSGTTGAPKGVMLNHRSFTWGIHQIQEFI 205
Query: 96 PAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVY 155
P D+ + LPPWH+ ER + + G + +++ + D+Q+ +P ++SVP ++
Sbjct: 206 PGSYNDRTILFLPPWHIAERLLETTLIAWGASMACSSIPTIPADMQKVKPTVLVSVPRLW 265
Query: 156 ETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDW 215
E LY I + SS ++ + ++++ T+ + T + P+ L+D
Sbjct: 266 EGLYKRIYDTVRKSSPFKQKLFHFAVKMAEITTSLQDTIRDSYATTETENPNQ--KLLDR 323
Query: 216 LWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVG 275
A + L P+ +L+ K++ + G + + G G++P HI F+ + G+ +
Sbjct: 324 FIASVFLLSLVPIKILSNKILERVRNLFGGKIRFALCGAGAMPSHIQFFFRSAGIHIIET 383
Query: 276 YGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQ 335
YG+TE++ + A G++G P+ T IK+V V G KG+ +G V
Sbjct: 384 YGMTETTGIGAIGEFPIPKNGAIGAPLPGTAIKLVGENGKVVTTPGEKGVAWHKGPHVTM 443
Query: 336 GYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGEN 395
GY+K P T +AL +DGWL++GDI + H+ G L GRAKDTIVLS GEN
Sbjct: 444 GYYKEPEKTSKAL-QDGWLDSGDI--LTWTHT--------GELKFAGRAKDTIVLSGGEN 492
Query: 396 VEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI-VHADASELSK 454
+EP +E S I Q++V+GQD++ G +IVP + V + ++ + D +E S
Sbjct: 493 LEPAPIEAKLTESEFINQVIVVGQDRKNLGVLIVPFFDRVQEEFQNQAVKIPKDPTEWSS 552
Query: 455 EKTISLLYGEL--RKWTSKCSF----QIGPIHVVDEPF 486
K I+ + + K ++K F +I +H++ + F
Sbjct: 553 SKEITTFFKNIVKDKISTKAGFKSFEKIAHVHILSKEF 590
>gi|417768534|ref|ZP_12416462.1| AMP-binding enzyme [Leptospira interrogans serovar Pomona str.
Pomona]
gi|418681218|ref|ZP_13242451.1| AMP-binding enzyme [Leptospira interrogans serovar Pomona str.
Kennewicki LC82-25]
gi|400327039|gb|EJO79295.1| AMP-binding enzyme [Leptospira interrogans serovar Pomona str.
Kennewicki LC82-25]
gi|409949507|gb|EKN99483.1| AMP-binding enzyme [Leptospira interrogans serovar Pomona str.
Pomona]
gi|455669067|gb|EMF34235.1| AMP-binding enzyme [Leptospira interrogans serovar Pomona str. Fox
32256]
Length = 624
Score = 225 bits (573), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 138/458 (30%), Positives = 233/458 (50%), Gaps = 20/458 (4%)
Query: 36 ESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIV 95
E K+ D + E++G D+AT +YTSGTTG PKGVML H++ I + + +
Sbjct: 146 EGEKSRIKKGDKTYDQRGESLGGKDLATIIYTSGTTGAPKGVMLNHRSFTWGIHQIQEFI 205
Query: 96 PAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVY 155
P D+ + LPPWH+ ER + + G + +++ + D+Q+ +P ++SVP ++
Sbjct: 206 PGSYNDRTILFLPPWHIAERLLETTLIAWGASMACSSIPTIPADMQKVKPTVLVSVPRLW 265
Query: 156 ETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDW 215
E LY I + SS ++ + ++++ T+ + T + P+ L+D
Sbjct: 266 EGLYKRIYDTVRKSSHFKQKLFHFAVKMAEITTSLQDTIRDSYATTETENPNQ--KLLDR 323
Query: 216 LWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVG 275
A + L P+ +L+ K++ + G + + G G++P HI F+ + G+ +
Sbjct: 324 FIASVFLLSLVPIKILSNKILERVRNLFGGKIRFALCGAGAMPSHIQFFFRSAGIHIIET 383
Query: 276 YGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQ 335
YG+TE++ + A G++G P+ T IK+V V G KG+ +G V
Sbjct: 384 YGMTETTGIGAIGEFPIPKNGAIGAPLPGTAIKLVGENGKVVTTPGEKGVAWHKGPHVTM 443
Query: 336 GYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGEN 395
GY+K P T +AL +DGWL++GDI + H+ G L GRAKDTIVLS GEN
Sbjct: 444 GYYKEPEKTSKAL-QDGWLDSGDI--LTWTHT--------GELKFAGRAKDTIVLSGGEN 492
Query: 396 VEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI-VHADASELSK 454
+EP +E S I Q++V+GQDQ+ G +IVP + V + ++ + D +E S
Sbjct: 493 LEPAPIEAKLTESEFINQVIVVGQDQKNLGVLIVPFFDRVQEEFQNQAVKIPKDPTEWSS 552
Query: 455 EKTISLLYGEL--RKWTSKCSF----QIGPIHVVDEPF 486
K I + + K ++K F +I +H++ + F
Sbjct: 553 SKEIITFFKNIVKDKISTKAGFKSFEKIAHVHILSKEF 590
>gi|398334162|ref|ZP_10518867.1| long-chain-fatty-acid--CoA ligase [Leptospira kmetyi serovar
Malaysia str. Bejo-Iso9]
Length = 645
Score = 222 bits (566), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 138/443 (31%), Positives = 230/443 (51%), Gaps = 26/443 (5%)
Query: 54 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 113
ET+ D+AT +YTSGTTG PKGVML H++ I L + VP D+ + LPPWH+
Sbjct: 185 ETLIGKDLATIIYTSGTTGAPKGVMLNHRSFTWGIHQLQEFVPGSCNDRTIVFLPPWHIA 244
Query: 114 ERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 173
ER + + G + ++V + D+Q+ +P ++SVP ++E LY I + + R
Sbjct: 245 ERLLETTLIAWGASMACSSVPTIPADMQKVKPTVLVSVPRLWEGLYKRIHDTVRKAPPLR 304
Query: 174 RVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAE 233
+ + +R++ T + T + P+ V +D A ++ L+P+ +L+
Sbjct: 305 QQLFHFAVRMAAITTGLQDTIRDSYATTETENPNQKV--LDRFVASVLLLSLYPVKILSY 362
Query: 234 KLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCN 293
K++ + G + + G G++P HI F+ + G+ + YG+TE++ + A
Sbjct: 363 KILQRVRDLFGGKMRFALCGAGAMPSHIQFFFRSAGIPIIETYGMTETTGIGAIGEFPLP 422
Query: 294 VLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGW 353
G++G P+ T IK+V + V G KG+ +G V GY+K P T +AL +DGW
Sbjct: 423 KNGAIGAPLPGTAIKLVGEDGRIVSLPGEKGVAWHKGPHVTVGYYKEPEKTAKAL-QDGW 481
Query: 354 LNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQ 413
L++GDI + H+ G L GRAKDTIVLS GEN+EP +E S I Q
Sbjct: 482 LDSGDI--LTWTHT--------GELKFAGRAKDTIVLSGGENLEPAPIEAKLTESEFINQ 531
Query: 414 IVVIGQDQRRPGAIIVPD----KEEVLMAAKRLSIVHADASELSKEKTISLLYGEL--RK 467
++V+GQD++ G +IVP +EE K+ + D SE + K +S+ + + K
Sbjct: 532 VIVVGQDRKNLGVLIVPFFDRVQEEFSAQGKK---IPKDPSEWNSSKEVSVFFKNIVKDK 588
Query: 468 WTSKCSF----QIGPIHVVDEPF 486
+++ F +I +H++ + F
Sbjct: 589 ISTRAGFKSFEKIAHVHILPKEF 611
>gi|374850349|dbj|BAL53340.1| long-chain acyl-CoA synthetase [uncultured Bacteroidetes bacterium]
Length = 611
Score = 222 bits (565), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 164/484 (33%), Positives = 246/484 (50%), Gaps = 59/484 (12%)
Query: 16 PD-IVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNP 74
PD + E I V+ +++ G E ++ R+ E DD+ T +YTSGTTG P
Sbjct: 143 PDRLGERIRVYRLSDMLARGSEMQRTVDVHGTIRRLL--ERTRGDDLCTIIYTSGTTGTP 200
Query: 75 KGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF--IFSRGIELMYTA 132
KGVMLTH+N+L + + ++ + D FLS LP H YER G++ S G +
Sbjct: 201 KGVMLTHRNILSNVEAARSVIAVDERDVFLSYLPMCHSYERTTGFYTAFASGGTTAFAES 260
Query: 133 VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKR 192
+ ++ +L+ +P M SVP ++E + GI Q+ S RR + + I
Sbjct: 261 LETVRTNLREVRPTIMTSVPQLFERIRGGIYAQMAQQSPLRRSIFEWAVTI--------- 311
Query: 193 IYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGV 251
G R Q++ RI A + + LAE+ V++KIQ A+G + V
Sbjct: 312 ---GLRRLREQEEQ-----------GRISAATAFG-YRLAERFVFRKIQLAVGGRLRFFV 356
Query: 252 SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVD 311
SGGG L I F+ AIG+ + GYGLTE+SPV+ R N G+VG P+ EI+I D
Sbjct: 357 SGGGPLAPEIGRFFWAIGLPILEGYGLTEASPVLTVNRLDDNEFGTVGKPLPGVEIRIDD 416
Query: 312 AETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIG-WIAPHHSRGR 370
+ G + RG +M+GY++NP T+ A+D DGWL+TGD+G W
Sbjct: 417 S-----------GEILARGPNIMRGYWQNPEETRAAIDADGWLHTGDVGRW--------- 456
Query: 371 SRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVP 430
S+R G L++ R K+ IV S G+NV P +E A + ++ Q+VVIG + A+IVP
Sbjct: 457 SQR--GNLMITDRIKNLIVTSGGKNVAPQVVERALKQWEVVAQVVVIGDGRPFCTALIVP 514
Query: 431 DKEEVLMAAKRLSIVHADA--SELSKE-KTISLLYGELRKWTSKCSF--QIGPIHVVDEP 485
+ EE L A R + A A SEL + + + + EL + + ++ I +V EP
Sbjct: 515 N-EEALRAFLRAQGIDASAQLSELCTDLRVLGAVMRELEHYQRDLAKYERVRRIAMVAEP 573
Query: 486 FTVN 489
FTV
Sbjct: 574 FTVE 577
>gi|392405544|ref|YP_006442156.1| AMP-dependent synthetase and ligase [Turneriella parva DSM 21527]
gi|390613498|gb|AFM14650.1| AMP-dependent synthetase and ligase [Turneriella parva DSM 21527]
Length = 631
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 134/378 (35%), Positives = 207/378 (54%), Gaps = 17/378 (4%)
Query: 61 IATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF 120
+AT +YTSGTTG PKGVML L+ + ++ D LS+LPPWH +ERA Y
Sbjct: 182 MATIIYTSGTTGAPKGVMLNQTGWLNALGRALEMKVITEKDTALSLLPPWHAFERAVEYG 241
Query: 121 IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARAL 180
+ E M + + L+ DL ++P SVP ++E+LY+GI +++ S +R V
Sbjct: 242 VMMAQCEFMISGINTLRQDLGDFKPTSFPSVPRIWESLYNGIMQKLEKESPVKRNVFYFF 301
Query: 181 IRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKI 240
+ + A+ + I+ G+ L Q +P + + A LA + V+ I
Sbjct: 302 LDVGAAWAKHEAIFNGYDL---QVKPKPALQQVLDRAASGAVLAALLPLKLASQAVFAPI 358
Query: 241 QSAIG--ISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSV 298
A+G +SK+ SGG +LP +D F AIG+KV GYG+TE+S +I+ R V G+V
Sbjct: 359 HQALGGNVSKSA-SGGSALPQVVDRFLTAIGIKVLEGYGMTETSALISLRDVQKPVSGTV 417
Query: 299 GHPINHTEIKIVDAETNEV-LPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 357
G P +IK+ + EV L G+KG + V +Q++ GY+K P D+DG+ +TG
Sbjct: 418 GRPFPGYKIKLKNDLGAEVPLAPGAKGTLWVHSNQLLLGYYKRPELNAVIFDKDGFFDTG 477
Query: 358 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 417
DI + G L+ GR+K+TI L+ GEN+EP+ +E+ L S I Q++++
Sbjct: 478 DIMVLT----------AAGDLMFAGRSKETIALAGGENIEPVPIEDKLLASEFIDQVMIV 527
Query: 418 GQDQRRPGAIIVPDKEEV 435
G D++ GAIIVP+ E+V
Sbjct: 528 GDDRKTLGAIIVPNFEKV 545
>gi|374586245|ref|ZP_09659337.1| AMP-dependent synthetase and ligase [Leptonema illini DSM 21528]
gi|373875106|gb|EHQ07100.1| AMP-dependent synthetase and ligase [Leptonema illini DSM 21528]
Length = 630
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 129/375 (34%), Positives = 219/375 (58%), Gaps = 17/375 (4%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 118
+ + +YTSGTTG PKG M T + + + ++ + A GD+ +S+LPPWHV+E+
Sbjct: 179 ESLCMIIYTSGTTGAPKGAMQTQQGWIACVENVIPRLQARKGDRAISLLPPWHVFEQVIE 238
Query: 119 YFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 178
Y G++ M T + LK+DL+ ++P SVP ++E++Y+GI ++ S A++ V
Sbjct: 239 YAFLYLGLQFMITDISLLKEDLKEFKPTIFPSVPRIWESVYNGIIGKVKKESTAKQKVFN 298
Query: 179 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 238
+ + + + + G+ L ++P+ + +L+ L +L L K+++K
Sbjct: 299 FFLSVGATWHRWHAVAFGYDL--QIEKPNAIASLLRRL-LAFFVLLLLSPLKLLSKVIFK 355
Query: 239 KIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 297
I+ A+G + +SGG +LP +D F A+G++V GYG+TE+S VI+AR V G+
Sbjct: 356 GIREALGGQMRVSLSGGSALPGVVDRFLSAVGLRVLEGYGMTETSAVISARLIEGPVSGT 415
Query: 298 VGHPINHTEIKIVDAETNEV--LPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLN 355
+G P++ EI++ + + +V +P G+KG + V+ QVM+GY++ P D+DG+ +
Sbjct: 416 IGKPLDGYEIRLKNEQGVDVKHIP-GAKGTLWVKSVQVMKGYYRRPELNDIVFDKDGFFD 474
Query: 356 TGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIV 415
TGD+ + G LV GRAKDTIVL++GEN+EP+ LE+ L S I Q++
Sbjct: 475 TGDLMMLTHR----------GELVFAGRAKDTIVLASGENLEPVPLEDRLLISDYIDQVM 524
Query: 416 VIGQDQRRPGAIIVP 430
V+G D++ P A+IVP
Sbjct: 525 VVGDDKKYPAALIVP 539
>gi|408792990|ref|ZP_11204600.1| AMP-binding enzyme [Leptospira meyeri serovar Hardjo str. Went 5]
gi|408464400|gb|EKJ88125.1| AMP-binding enzyme [Leptospira meyeri serovar Hardjo str. Went 5]
Length = 641
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 164/503 (32%), Positives = 250/503 (49%), Gaps = 45/503 (8%)
Query: 5 ILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATY 64
I+L+G+ S D+ IP+ ++ ++ +K +D H + + I +DIAT
Sbjct: 138 IILFGETKSEKTDLA--IPILNFSDL-------KKYGVTIDDENFHKRGKQIQEEDIATI 188
Query: 65 VYTSGTTGNPKGVMLTHKNLLHQIRSLY-----DIVPAENGDKFLSMLPPWHVYERACGY 119
+YTSGTTG PKGVMLTH ++L +I SL V GD L LPPWH ER
Sbjct: 189 IYTSGTTGKPKGVMLTHGSILFEINSLVAEFRNTGVQVGEGDVTLGFLPPWHSGERIFET 248
Query: 120 FIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARA 179
F GI++ +T+V L DL + +P + +VP V+E+ Y I+ I S ++ +
Sbjct: 249 ICFYSGIKIAFTSVPELGKDLAKTKPTILFTVPRVWESFYDKIKDTIHKSGLFKKYFLKI 308
Query: 180 LIRISFAYT-----AFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEK 234
L+ S ++ AF RI R + ++L L ++ I I PL L K
Sbjct: 309 LVWNSMNFSLCYDKAFDRI------PRLNESKTFLQVL-SQIFHLIKLIIYLPL-LPISK 360
Query: 235 LVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCN 293
LV KI S +G + +G G+L +D F AIG+ + YG+TE+S V R
Sbjct: 361 LVLSKILSVLGGRLRYAFAGAGALQAEVDRFMYAIGMPILEVYGMTENSGVSTIRHYNDF 420
Query: 294 VLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGW 353
+G+VG PI+ IK+++ E+ G KG+ G M+GY+ TK L D W
Sbjct: 421 SVGNVGKPIHGVTIKLINEFGKEITKPGIKGVAHHHGFHNMKGYYLEEEKTKAVLTADRW 480
Query: 354 LNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQ 413
LN+GD+ G L GRAKDTIVLS GENVEP +E +S I Q
Sbjct: 481 LNSGDLLVYTAQ----------GNLKFAGRAKDTIVLSGGENVEPEPIEICLKQSEFIDQ 530
Query: 414 IVVIGQDQRRPGAIIV--PDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTS- 470
VV+GQD++ A+I+ DK + + + +S+ + +E + L+ E++++ S
Sbjct: 531 AVVVGQDKKSLSALILLNLDKVQSYLNLQSISLDLNNCIFNEEETILKLIKEEVKRFVSD 590
Query: 471 KCSFQ----IGPIHVVDEPFTVN 489
K F+ I I ++ PF ++
Sbjct: 591 KNGFKSFERITNIFILQNPFVIH 613
>gi|418747259|ref|ZP_13303569.1| AMP-binding enzyme [Leptospira santarosai str. CBC379]
gi|410792053|gb|EKR89998.1| AMP-binding enzyme [Leptospira santarosai str. CBC379]
Length = 645
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 142/462 (30%), Positives = 234/462 (50%), Gaps = 28/462 (6%)
Query: 36 ESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIV 95
E ++ + D + E + D+AT +YTSGTTG PKGVML H+N I L + V
Sbjct: 167 EGERSRTKKGDKSYIQRGEVLIGKDLATIIYTSGTTGAPKGVMLNHRNFTWGIHQLQEFV 226
Query: 96 PAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVY 155
P D+ + LPPWH+ ER + + G + ++V + D+Q+ +P ++SVP ++
Sbjct: 227 PCSYEDRTIVFLPPWHIAERLLETTLIAWGASMACSSVPTIPADMQKVKPTVLVSVPRLW 286
Query: 156 ETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFK-RIYEGFCLTRNQKQPSYLVALID 214
E LY I + + R+ + A + ++ T+ + I + + T + ID
Sbjct: 287 EGLYKRIYDTVRKAPPLRQKLFYAAVSMAKITTSLQDTIRDSYTTTETENLGQ---KTID 343
Query: 215 WLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQV 274
A + L+P+ +L+ K++ + G + + G G++P HI F+ + G+ +
Sbjct: 344 RFVASVFLIFLYPIKILSHKILQRVRDLFGGRIRFALCGAGAMPSHIQFFFRSAGIPIIE 403
Query: 275 GYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVM 334
YG+TE++ + A G++G P+ T IK+V + V G KG+ +G V
Sbjct: 404 TYGMTETTGIGAIGEFPLPKNGAIGAPLPGTAIKLVGEDGKIVTTPGQKGVAWHKGPHVT 463
Query: 335 QGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGE 394
GY+K P T Q L +DGWL++GDI + H+ G L GRAKDTIVLS GE
Sbjct: 464 LGYYKEPEKTAQTL-QDGWLDSGDI--LTWTHT--------GELKFAGRAKDTIVLSGGE 512
Query: 395 NVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVP--DK--EEVLMAAKRLSIVHADAS 450
N+EP +E S I Q++V+GQD++ G +IVP D+ EE K+ + D +
Sbjct: 513 NLEPAPIEAKLTESEFINQVIVVGQDKKNLGVLIVPFFDRVYEEFQSQGKK---IPKDPT 569
Query: 451 ELSKEKTISLLYGEL--RKWTSKCSF----QIGPIHVVDEPF 486
+ + K +S + + K ++K F +I IHV+ + F
Sbjct: 570 DWNSSKEVSSFFKNIVKDKISTKAGFKSFEKIAHIHVLSKEF 611
>gi|333370495|ref|ZP_08462494.1| long-chain-fatty-acid-CoA ligase [Desmospora sp. 8437]
gi|332977723|gb|EGK14486.1| long-chain-fatty-acid-CoA ligase [Desmospora sp. 8437]
Length = 611
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 163/462 (35%), Positives = 238/462 (51%), Gaps = 52/462 (11%)
Query: 15 APDIVEEIPVFSYDEIIDLGRE-SRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGN 73
AP E V S+D + GRE RK + D ++ IG D + T ++TSGTTG
Sbjct: 137 APGFSEGEGVLSFDSLRKAGREHPRKDWEDG--------WKNIGGDQLFTIIHTSGTTGP 188
Query: 74 PKGVMLTHKNLLHQIRSL-YDIVPAENGDKFLSMLPPWHVYERACGYFIFSR-GIELMYT 131
PKG MLTH+NLL + + IV GD LS LP HV+ER G F+ R G + Y
Sbjct: 189 PKGAMLTHRNLLANTEGVQFWIVELVPGDVCLSYLPLSHVFERMAGQFVPLREGATIAYA 248
Query: 132 -AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAF 190
++ ++++L +P M +VP + E +Y+ +Q+QI ++S +R + ++A
Sbjct: 249 ESIDTIQENLLEVRPTVMTTVPRLLEKIYAKVQEQIASASPLKRKI------FNWAVDVG 302
Query: 191 KRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAG 250
R YEGF R + L+ L I + L LA++LV++KI+ +G G
Sbjct: 303 HRRYEGFIDAR--------MDLL--LKGEAIPSDLRRQFALADRLVFRKIKERVGGRLRG 352
Query: 251 -VSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKI 309
VSG L I F+ +I + V GYGLTE+SPVIAA + +G+VG P+ + E+KI
Sbjct: 353 LVSGAAPLNQEIARFFWSIDIPVLEGYGLTEASPVIAANPMMRSKIGTVGKPLPNLEVKI 412
Query: 310 VDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRG 369
G+ G + RG +MQGY+KN AT++AL DGWL+TGD+G P
Sbjct: 413 -----------GTDGEILARGPSIMQGYYKNEEATREAL-RDGWLHTGDLGEWDPD---- 456
Query: 370 RSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIV 429
G L + R K+ IVLSTG+NV P +E S I Q V+IG ++ A++V
Sbjct: 457 ------GFLRVVDRKKNLIVLSTGKNVAPQPVENHITNSPYISQAVLIGNGRKYVIALVV 510
Query: 430 PDKEEVLMAAKRLSIVHADASELSKEKTI-SLLYGELRKWTS 470
PD E +L A + D L++ + L E+ K T
Sbjct: 511 PDYENLLPWAGKRGFPEQDPENLAEHPEVKKFLKEEVEKHTE 552
>gi|398339139|ref|ZP_10523842.1| long-chain-fatty-acid--CoA ligase [Leptospira kirschneri serovar
Bim str. 1051]
gi|418676702|ref|ZP_13237980.1| AMP-binding enzyme [Leptospira kirschneri serovar Grippotyphosa
str. RM52]
gi|421132459|ref|ZP_15592627.1| AMP-binding enzyme [Leptospira kirschneri str. 2008720114]
gi|400322602|gb|EJO70458.1| AMP-binding enzyme [Leptospira kirschneri serovar Grippotyphosa
str. RM52]
gi|410356224|gb|EKP03581.1| AMP-binding enzyme [Leptospira kirschneri str. 2008720114]
Length = 645
Score = 218 bits (555), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 136/459 (29%), Positives = 233/459 (50%), Gaps = 22/459 (4%)
Query: 36 ESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIV 95
E K+ D + E++ D+AT +YTSGTTG PKGVML H++ I + + V
Sbjct: 167 EGEKSRIKKGDKTYDQRGESLVGKDLATIIYTSGTTGAPKGVMLNHRSFTWGIHQIQEFV 226
Query: 96 PAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVY 155
P D+ + LPPWH+ ER + + G + +++ + D+Q+ +P ++SVP ++
Sbjct: 227 PGSYNDRTILFLPPWHIAERLLETTLIAWGASMACSSIPTIPADMQKVKPTVLVSVPRLW 286
Query: 156 ETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDW 215
E LY I + S ++ + ++I+ T + T + P+ L+D
Sbjct: 287 EGLYKRIHDTVRKSPLFKQKLFHFAVKIAEITTNLQDTIRDSYATTKMENPNQ--KLLDR 344
Query: 216 LWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQV 274
A + + P+ +L+ K++ K+++ G + + G G++P HI F+ + G+ +
Sbjct: 345 FVASVFLISMIPIKILSYKIL-KRVRDLFGGRIRFALCGAGAMPSHIQFFFRSAGIHIIE 403
Query: 275 GYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVM 334
YG+TE++ + A G++G P+ T IK+V V G KG+ +G V
Sbjct: 404 TYGMTETTGIGAIGEFPIPKNGAIGAPLPGTAIKLVGENGKIVTTPGEKGVAWHKGPHVT 463
Query: 335 QGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGE 394
GY+K P T +AL +DGWL++GDI + H+ G L GRAKDTIVLS GE
Sbjct: 464 MGYYKEPEKTSKAL-QDGWLDSGDI--LTWTHT--------GELKFAGRAKDTIVLSGGE 512
Query: 395 NVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI-VHADASELS 453
N+EP +E S I Q++V+GQDQ+ G +IVP + V + ++ + D E +
Sbjct: 513 NLEPAPIEAKLTESEFINQVIVVGQDQKNLGVLIVPFFDRVQEEFQNQAVKIPKDPGEWN 572
Query: 454 KEKTISLLYGEL--RKWTSKCSF----QIGPIHVVDEPF 486
K ++ + + K ++K F +I +H++ + F
Sbjct: 573 SSKEVATFFKNIVKDKISTKAGFKSFEKIAHVHILSKEF 611
>gi|418688436|ref|ZP_13249592.1| AMP-binding enzyme [Leptospira kirschneri serovar Grippotyphosa
str. Moskva]
gi|418739761|ref|ZP_13296142.1| AMP-binding enzyme [Leptospira kirschneri serovar Valbuzzi str.
200702274]
gi|410737293|gb|EKQ82035.1| AMP-binding enzyme [Leptospira kirschneri serovar Grippotyphosa
str. Moskva]
gi|410752883|gb|EKR09855.1| AMP-binding enzyme [Leptospira kirschneri serovar Valbuzzi str.
200702274]
Length = 645
Score = 218 bits (554), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 136/459 (29%), Positives = 233/459 (50%), Gaps = 22/459 (4%)
Query: 36 ESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIV 95
E K+ D + E++ D+AT +YTSGTTG PKGVML H++ I + + V
Sbjct: 167 EGEKSRIKKGDKTYDQRGESLVGKDLATIIYTSGTTGAPKGVMLNHRSFTWGIHQIQEFV 226
Query: 96 PAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVY 155
P D+ + LPPWH+ ER + + G + +++ + D+Q+ +P ++SVP ++
Sbjct: 227 PGSYNDRTILFLPPWHIAERLLETTLIAWGASMACSSIPTIPADMQKVKPTVLVSVPRLW 286
Query: 156 ETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDW 215
E LY I + S ++ + ++I+ T + T + P+ L+D
Sbjct: 287 EGLYKRIHDTVRKSPLFKQKLFHFAVKIAEITTNLQDTIRDSYATTKMENPNQ--KLLDR 344
Query: 216 LWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQV 274
A + + P+ +L+ K++ K+++ G + + G G++P HI F+ + G+ +
Sbjct: 345 FVASVFLISMIPIKILSYKIL-KRVRDLFGGRIRFALCGAGAMPSHIQFFFRSAGIHIIE 403
Query: 275 GYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVM 334
YG+TE++ + A G++G P+ T IK+V V G KG+ +G V
Sbjct: 404 TYGMTETTGIGAIGEFPIPKNGAIGAPLPGTAIKLVGENGKIVTTPGEKGVAWHKGPHVT 463
Query: 335 QGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGE 394
GY+K P T +AL +DGWL++GDI + H+ G L GRAKDTIVLS GE
Sbjct: 464 MGYYKEPEKTSKAL-QDGWLDSGDI--LTWTHT--------GELKFAGRAKDTIVLSGGE 512
Query: 395 NVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI-VHADASELS 453
N+EP +E S I Q++V+GQDQ+ G +IVP + V + ++ + D E +
Sbjct: 513 NLEPAPIEAKLTESEFINQVIVVGQDQKNLGVLIVPFFDRVQEEFQNQAVKIPKDPGEWN 572
Query: 454 KEKTISLLYGEL--RKWTSKCSF----QIGPIHVVDEPF 486
K ++ + + K ++K F +I +H++ + F
Sbjct: 573 SSKEVATFFKNIVKDKISTKAGFKSFEKIAHVHILSKEF 611
>gi|421090896|ref|ZP_15551686.1| AMP-binding enzyme [Leptospira kirschneri str. 200802841]
gi|410000482|gb|EKO51112.1| AMP-binding enzyme [Leptospira kirschneri str. 200802841]
Length = 645
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 136/459 (29%), Positives = 233/459 (50%), Gaps = 22/459 (4%)
Query: 36 ESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIV 95
E K+ D + E++ D+AT +YTSGTTG PKGVML H++ I + + V
Sbjct: 167 EGEKSRIKKGDKTYDQRGESLVGKDLATIIYTSGTTGAPKGVMLNHRSFTWGIHQIQEFV 226
Query: 96 PAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVY 155
P D+ + LPPWH+ ER + + G + +++ + D+Q+ +P ++SVP ++
Sbjct: 227 PGSYNDRTILSLPPWHIAERLLETTLIAWGASMACSSIPTIPADMQKVKPTVLVSVPRLW 286
Query: 156 ETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDW 215
E LY I + S ++ + ++I+ T + T + P+ L+D
Sbjct: 287 EGLYKRIHDTVRKSPLFKQKLFHFAVKIAEITTNLQDTIRDSYATTKMENPNQ--KLLDR 344
Query: 216 LWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQV 274
A + + P+ +L+ K++ K+++ G + + G G++P HI F+ + G+ +
Sbjct: 345 FVASVFLISMIPIKILSYKIL-KRVRDLFGGRIRFALCGAGAMPSHIQFFFRSAGIHIIE 403
Query: 275 GYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVM 334
YG+TE++ + A G++G P+ T IK+V V G KG+ +G V
Sbjct: 404 TYGMTETTGIGAIGEFPIPKNGAIGAPLPGTAIKLVGENGKIVTTPGEKGVAWHKGPHVT 463
Query: 335 QGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGE 394
GY+K P T +AL +DGWL++GDI + H+ G L GRAKDTIVLS GE
Sbjct: 464 MGYYKEPEKTSKAL-QDGWLDSGDI--LTWTHT--------GELKFAGRAKDTIVLSGGE 512
Query: 395 NVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI-VHADASELS 453
N+EP +E S I Q++V+GQDQ+ G +IVP + V + ++ + D E +
Sbjct: 513 NLEPAPIEAKLTESEFINQVIVVGQDQKNLGVLIVPFFDRVQEEFQNQAVKIPKDPGEWN 572
Query: 454 KEKTISLLYGEL--RKWTSKCSF----QIGPIHVVDEPF 486
K ++ + + K ++K F +I +H++ + F
Sbjct: 573 SSKEVATFFKNIVKDKISTKAGFKSFEKIAHVHILSKEF 611
>gi|410940968|ref|ZP_11372767.1| AMP-binding enzyme [Leptospira noguchii str. 2006001870]
gi|410783527|gb|EKR72519.1| AMP-binding enzyme [Leptospira noguchii str. 2006001870]
Length = 645
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 136/461 (29%), Positives = 233/461 (50%), Gaps = 26/461 (5%)
Query: 36 ESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIV 95
E K+ D + E++ D+AT +YTSGTTG PKGVML H++ I + + V
Sbjct: 167 EGEKSRIKKGDKTYDQRGESLVGKDLATIIYTSGTTGAPKGVMLNHRSFTWGIHQIQEFV 226
Query: 96 PAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVY 155
P D+ + LPPWH+ ER + + G + +++ + D+Q+ +P ++SVP ++
Sbjct: 227 PGSYNDRTILFLPPWHIAERLLETALIAWGASMACSSIPTIPADMQKVKPTVLVSVPRLW 286
Query: 156 ETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDW 215
E LY I + S ++ + ++++ T + T ++P+ L+D
Sbjct: 287 EGLYKRIHDTVRKSPPLKQKLFHFAVKMAEIITNLQDTIRDSYATTETEKPNQ--KLLDR 344
Query: 216 LWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVG 275
A I + P+ +L+ K++ + G + + G G++P HI F+ + G+ +
Sbjct: 345 FIAGIFLLSMLPIKILSYKILERVRDLFGGRIRFALCGAGAMPSHIQFFFRSAGIHIIET 404
Query: 276 YGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQ 335
YG+TE++ + A G++G P+ T IK+V + V G KG+ +G V
Sbjct: 405 YGMTETTGIGAIGEFPIPKNGAIGAPLPGTAIKLVGEDGKIVTTPGEKGVAWHKGPHVTM 464
Query: 336 GYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGEN 395
GY+K P T +AL +DGWL++GDI + H+ G L GRAKDTIVLS GEN
Sbjct: 465 GYYKEPEKTSKAL-QDGWLDSGDI--LTWTHT--------GELKFAGRAKDTIVLSGGEN 513
Query: 396 VEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPD----KEEVLMAAKRLSIVHADASE 451
+EP +E S I Q++V+GQD++ G +IVP +EE + K++ D E
Sbjct: 514 LEPAPIEAKLTESEFINQVIVVGQDRKNLGVLIVPFFDRVQEEFQIQGKKIP---KDPIE 570
Query: 452 LSKEKTISLLYGEL--RKWTSKCSF----QIGPIHVVDEPF 486
+ K ++ + + K ++K F +I +H++ + F
Sbjct: 571 WNSSKEVATFFKNIVKDKISTKAGFKSFEKIAHVHILSKEF 611
>gi|410450615|ref|ZP_11304649.1| AMP-binding enzyme [Leptospira sp. Fiocruz LV3954]
gi|418752471|ref|ZP_13308732.1| AMP-binding enzyme [Leptospira santarosai str. MOR084]
gi|422004493|ref|ZP_16351710.1| long-chain-fatty-acid--CoA ligase [Leptospira santarosai serovar
Shermani str. LT 821]
gi|409967201|gb|EKO35037.1| AMP-binding enzyme [Leptospira santarosai str. MOR084]
gi|410015493|gb|EKO77591.1| AMP-binding enzyme [Leptospira sp. Fiocruz LV3954]
gi|417256795|gb|EKT86209.1| long-chain-fatty-acid--CoA ligase [Leptospira santarosai serovar
Shermani str. LT 821]
gi|456876738|gb|EMF91817.1| AMP-binding enzyme [Leptospira santarosai str. ST188]
Length = 645
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 140/462 (30%), Positives = 234/462 (50%), Gaps = 28/462 (6%)
Query: 36 ESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIV 95
E ++ + D + E + D+AT +YTSGTTG PKGVML H++ I L + V
Sbjct: 167 EGERSRTKKGDKSYIQRGEVLIGKDLATIIYTSGTTGAPKGVMLNHRSFTWGIHQLQEFV 226
Query: 96 PAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVY 155
P D+ + LPPWH+ ER + + G + ++V + D+Q+ +P ++SVP ++
Sbjct: 227 PCSYEDRTIVFLPPWHIAERLLETTLIAWGASMACSSVPTIPADMQKVKPTVLVSVPRLW 286
Query: 156 ETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFK-RIYEGFCLTRNQKQPSYLVALID 214
E LY I + + R+ + A + ++ T+ + I + + T + ID
Sbjct: 287 EGLYKRIYDTVRKAPPLRQKLFYAAVSMAKITTSLQDTIRDSYTTTETENLGQ---KTID 343
Query: 215 WLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQV 274
A + L+P+ +L+ K++ + G + + G G++P HI F+ + G+ +
Sbjct: 344 RFVASVFLIFLYPIKILSHKILQRVRDLFGGRIRFALCGAGAMPSHIQFFFRSAGIPIIE 403
Query: 275 GYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVM 334
YG+TE++ + A G++G P+ T IK+V + V G KG+ +G V
Sbjct: 404 TYGMTETTGIGAIGEFPLPKNGAIGAPLPGTAIKLVGEDGKIVTTPGQKGVAWHKGPHVT 463
Query: 335 QGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGE 394
GY+K P T Q L +DGWL++GDI + H+ G L GRAKDTIVLS GE
Sbjct: 464 LGYYKEPEKTAQTL-QDGWLDSGDI--LTWTHT--------GELKFAGRAKDTIVLSGGE 512
Query: 395 NVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVP--DK--EEVLMAAKRLSIVHADAS 450
N+EP +E S I Q++V+GQD++ G +IVP D+ EE K+ + D +
Sbjct: 513 NLEPAPIEAKLTESEFINQVIVVGQDKKNLGVLIVPFFDRVYEEFQSQGKK---IPKDPT 569
Query: 451 ELSKEKTISLLYGEL--RKWTSKCSF----QIGPIHVVDEPF 486
+ + K +S + + K ++K F +I IH++ + F
Sbjct: 570 DWNSSKEVSSFFKNIVKDKISTKAGFKSFEKIAHIHILSKEF 611
>gi|418719367|ref|ZP_13278567.1| AMP-binding enzyme [Leptospira borgpetersenii str. UI 09149]
gi|418738800|ref|ZP_13295193.1| AMP-binding enzyme [Leptospira borgpetersenii serovar Castellonis
str. 200801910]
gi|410744520|gb|EKQ93261.1| AMP-binding enzyme [Leptospira borgpetersenii str. UI 09149]
gi|410745498|gb|EKQ98408.1| AMP-binding enzyme [Leptospira borgpetersenii serovar Castellonis
str. 200801910]
Length = 645
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 142/461 (30%), Positives = 229/461 (49%), Gaps = 26/461 (5%)
Query: 36 ESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIV 95
E K+ D + E + D+AT +YTSGTTG PKGVML H++ I L + V
Sbjct: 167 EGEKSRLKKGDKVYTQRGEILIGKDLATIIYTSGTTGTPKGVMLNHRSFTWGIHQLQEFV 226
Query: 96 PAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVY 155
P D+ + LPPWH+ ER + + G + +++ + D+QR +P ++SVP ++
Sbjct: 227 PCSCNDRTIIFLPPWHIAERLLETALIAWGASMACSSIPTIPADMQRVKPTVLVSVPRLW 286
Query: 156 ETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDW 215
E LY I + + R+ + +R++ T+ + T + P ID
Sbjct: 287 EGLYKRIHDTVRKAPPLRQKLFHIAVRMAEITTSLQDTIRDSYTTIEIENPRQ--KTIDR 344
Query: 216 LWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVG 275
A L+P+ +L+ K++ + G + + G G++P HI F+ + G+ +
Sbjct: 345 FVASAFLLFLYPIKILSYKILQRVRDLFGGRIRFALCGAGAMPPHIQFFFRSAGIPIIET 404
Query: 276 YGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQ 335
YG+TE++ + A G++G P+ T IK+V + G KGI +G V
Sbjct: 405 YGMTETTGIGAIGEFPLPKNGAIGAPLPGTAIKLVGEDGKIATAPGEKGIAWHKGPHVTV 464
Query: 336 GYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGEN 395
GY+K P T + L +DGWL++GDI + H+ G L GRAKDTIVLS GEN
Sbjct: 465 GYYKEPEKTAKTL-QDGWLDSGDI--LTWTHT--------GELKFAGRAKDTIVLSGGEN 513
Query: 396 VEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVP--DK--EEVLMAAKRLSIVHADASE 451
+EP +E S I Q++V+GQD++ G +IVP D+ EE K+L D +E
Sbjct: 514 LEPAPIEAKLTESEFINQVIVVGQDKKNLGVLIVPFFDRVYEEFQSQGKKLP---KDPTE 570
Query: 452 LSKEKTISLLYGEL--RKWTSKCSF----QIGPIHVVDEPF 486
+ K +S + + K ++K F +I IH++ + F
Sbjct: 571 WNSSKEVSSFFKNIVKDKISTKAGFKSFEKIAHIHILPKEF 611
>gi|421110232|ref|ZP_15570733.1| AMP-binding enzyme [Leptospira santarosai str. JET]
gi|410804417|gb|EKS10534.1| AMP-binding enzyme [Leptospira santarosai str. JET]
Length = 645
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 139/462 (30%), Positives = 234/462 (50%), Gaps = 28/462 (6%)
Query: 36 ESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIV 95
E ++ + D + E + D+AT +YTSGTTG PKGVML H++ I L + V
Sbjct: 167 EGERSRTKKGDKSYIQRGEVLIGKDLATIIYTSGTTGTPKGVMLNHRSFTWGIHQLQEFV 226
Query: 96 PAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVY 155
P D+ + LPPWH+ ER + + G + ++V + D+Q+ +P ++SVP ++
Sbjct: 227 PCSYEDRTIVFLPPWHIAERLLETTLIAWGASMACSSVPTIPADMQKVKPTVLVSVPRLW 286
Query: 156 ETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFK-RIYEGFCLTRNQKQPSYLVALID 214
E LY I + + R+ + A + ++ T+ + I + + T + ID
Sbjct: 287 EGLYKRIYDTVRKAPPLRQKLFYAAVSMAKITTSLQDTIRDSYTTTETENLGQ---KTID 343
Query: 215 WLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQV 274
A + L+P+ +L+ K++ + G + + G G++P HI F+ + G+ +
Sbjct: 344 RFVASVFLIFLYPIKILSHKILQRVRDLFGGRIRFALCGAGAMPSHIQFFFRSAGIPIIE 403
Query: 275 GYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVM 334
YG+TE++ + A G++G P+ T IK+V + V G KG+ +G +
Sbjct: 404 TYGMTETTGIGAIGEFPLPKNGAIGAPLPGTAIKLVGEDGKIVTIPGQKGVAWHKGPHIT 463
Query: 335 QGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGE 394
GY+K P T Q L +DGWL++GDI + H+ G L GRAKDTIVLS GE
Sbjct: 464 LGYYKEPEKTAQTL-QDGWLDSGDI--LTWTHT--------GELKFAGRAKDTIVLSGGE 512
Query: 395 NVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVP--DK--EEVLMAAKRLSIVHADAS 450
N+EP +E S I Q++V+GQD++ G +IVP D+ EE K+ + D +
Sbjct: 513 NLEPAPIEAKLTESEFINQVIVVGQDKKNLGVLIVPFFDRVYEEFQSQGKK---IPKDPT 569
Query: 451 ELSKEKTISLLYGEL--RKWTSKCSF----QIGPIHVVDEPF 486
+ + K +S + + K ++K F +I IH++ + F
Sbjct: 570 DWNSSKEVSSFFKNIVKDKISTKAGFKSFEKIAHIHILSKEF 611
>gi|359686030|ref|ZP_09256031.1| long-chain-fatty-acid--CoA ligase [Leptospira santarosai str.
2000030832]
Length = 645
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 140/462 (30%), Positives = 234/462 (50%), Gaps = 28/462 (6%)
Query: 36 ESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIV 95
E ++ + D + E + D+AT +YTSGTTG PKGVML H++ I L + V
Sbjct: 167 EGERSRTKKGDKSYIQRGEVLIGKDLATIIYTSGTTGAPKGVMLNHRSFTWGIHQLQEFV 226
Query: 96 PAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVY 155
P D+ + LPPWH+ ER + + G + ++V + D+Q+ +P ++SVP ++
Sbjct: 227 PCSYEDRTIVFLPPWHIAERLLETTLIAWGASMACSSVPTIPADMQKVKPTVLVSVPRLW 286
Query: 156 ETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFK-RIYEGFCLTRNQKQPSYLVALID 214
E LY I + + R+ + A + ++ T+ + I + + T + ID
Sbjct: 287 EGLYKRIYDTVRKAPPLRQKLFYAAVSMAKITTSLQDTIRDSYTTTETENLGQ---KTID 343
Query: 215 WLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQV 274
A + L+P+ +L+ K++ + G + + G G++P HI F+ + G+ +
Sbjct: 344 RFVASVFLIFLYPIKILSHKILQRVRDLFGGRIRFALCGAGAMPSHIQFFFRSAGIPIIE 403
Query: 275 GYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVM 334
YG+TE++ + A G++G P+ T IK+V + V G KG+ +G V
Sbjct: 404 TYGMTETTGIGAIGEFPLPKNGAIGAPLPGTAIKLVGEDGKIVTIPGQKGVAWHKGPHVT 463
Query: 335 QGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGE 394
GY+K P T Q L +DGWL++GDI + H+ G L GRAKDTIVLS GE
Sbjct: 464 LGYYKEPEKTAQTL-QDGWLDSGDI--LTWTHT--------GELKFAGRAKDTIVLSGGE 512
Query: 395 NVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVP--DK--EEVLMAAKRLSIVHADAS 450
N+EP +E S I Q++V+GQD++ G +IVP D+ EE K+ + D +
Sbjct: 513 NLEPAPIEAKLTESEFINQVIVVGQDKKNLGVLIVPFFDRVYEEFQSQGKK---IPKDPT 569
Query: 451 ELSKEKTISLLYGEL--RKWTSKCSF----QIGPIHVVDEPF 486
+ + K +S + + K ++K F +I IH++ + F
Sbjct: 570 DWNSSKEVSSFFKNIVKDKISTKAGFKSFEKIAHIHILSKEF 611
>gi|417780670|ref|ZP_12428431.1| AMP-binding enzyme [Leptospira weilii str. 2006001853]
gi|410779379|gb|EKR63996.1| AMP-binding enzyme [Leptospira weilii str. 2006001853]
Length = 645
Score = 215 bits (547), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 144/464 (31%), Positives = 235/464 (50%), Gaps = 32/464 (6%)
Query: 36 ESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIV 95
E K+ D + E + D+AT +YTSGTTG PKGVML H++ I L + V
Sbjct: 167 EGEKSRIKKGDKPYTQRGEILIGKDLATIIYTSGTTGAPKGVMLNHRSFTWGIHQLQEFV 226
Query: 96 PAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVY 155
P D+ + LPPWH+ ER + + G + +++ + D+Q+ +P ++SVP ++
Sbjct: 227 PCSCNDRTIIFLPPWHIAERLLETTLIAWGASMACSSIPTIPADMQKVKPTVLVSVPRLW 286
Query: 156 ETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFK-RIYEGFCLT--RNQKQPSYLVAL 212
E LY I + + R+ + +R++ T+ + I + + T N +Q +
Sbjct: 287 EGLYKRIHDTVRKAPPLRQKLFHVAVRMAELTTSLQDTIRDSYATTEIENPRQKT----- 341
Query: 213 IDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKV 272
ID A L+P+ +L+ K++ K G + + G G++P HI F+ + G+ +
Sbjct: 342 IDRFVASAFLLFLYPIKILSYKILQKVRDLFGGRIRFALCGAGAMPPHIQFFFRSAGIPI 401
Query: 273 QVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQ 332
YG+TE++ + A ++G P+ T IK+V + V G KGI +G
Sbjct: 402 IETYGMTETTGIGAIGEFPLPKNDAIGAPLPGTAIKLVGEDGKIVTAPGEKGIAWHKGPH 461
Query: 333 VMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLST 392
V GY+K P T +AL +DGWL++GDI + H+ G L GRAKDTIVLS
Sbjct: 462 VTVGYYKEPEKTAKAL-QDGWLDSGDI--LTWTHT--------GELKFAGRAKDTIVLSG 510
Query: 393 GENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVP--DK--EEVLMAAKRLSIVHAD 448
GEN+EP +E S I Q++V+GQD++ G +IVP D+ EE K+L D
Sbjct: 511 GENLEPAPIEAKLTESEFINQVIVVGQDKKNLGVLIVPFFDRVYEEFQSQGKKLP---KD 567
Query: 449 ASELSKEKTISLLYGEL--RKWTSKCSF----QIGPIHVVDEPF 486
+E + K +S + + K ++K F +I I+++ + F
Sbjct: 568 PTEWNSSKEVSSFFKNIVKDKISTKAGFKTFEKIAHIYILPKEF 611
>gi|418696266|ref|ZP_13257275.1| AMP-binding enzyme [Leptospira kirschneri str. H1]
gi|409955795|gb|EKO14727.1| AMP-binding enzyme [Leptospira kirschneri str. H1]
Length = 645
Score = 214 bits (546), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 133/458 (29%), Positives = 231/458 (50%), Gaps = 20/458 (4%)
Query: 36 ESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIV 95
E K+ D + E++ D+AT +YTSGTTG PKGVML H++ I + + V
Sbjct: 167 EGEKSRIKKGDKTYDQRGESLVGKDLATIIYTSGTTGAPKGVMLNHRSFTWGIHQIQEFV 226
Query: 96 PAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVY 155
P D+ + LPPWH+ ER + + G + +++ + D+Q+ +P ++SVP ++
Sbjct: 227 PGSYNDRTILFLPPWHIAERLLETTLIAWGASMACSSIPTIPADMQKVKPTVLVSVPRLW 286
Query: 156 ETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDW 215
E LY I + S ++ + ++I+ T + T + P+ L+D
Sbjct: 287 EGLYKRIHDTVRKSPLFKQKLFHFAVKIAEITTNLQDTIRDSYATTKTENPNQ--KLLDR 344
Query: 216 LWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVG 275
A + + P+ +L+ K++ + G + + G G++P HI F+ + G+ +
Sbjct: 345 FVASVFLISMIPIKILSYKILERVRDLFGGRIRFALCGAGAMPSHIQFFFRSAGIHIIET 404
Query: 276 YGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQ 335
YG+TE++ + A G++G P+ T IK+V V G KG+ +G V
Sbjct: 405 YGMTETTGIGAVGEFPIPKNGAIGAPLPGTAIKLVGENGKVVTTPGEKGVAWHKGPHVTM 464
Query: 336 GYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGEN 395
GY+K P T +AL +DGWL++GDI + H+ G L GRAKDTIVLS GEN
Sbjct: 465 GYYKEPEKTSKAL-QDGWLDSGDI--LTWTHT--------GELKFAGRAKDTIVLSGGEN 513
Query: 396 VEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI-VHADASELSK 454
+EP +E S I Q++V+GQD++ G +IVP + V + ++ + + ++ +
Sbjct: 514 LEPAPIEAKLTESEFINQVIVVGQDRKNLGVLIVPFFDRVQEEFQNQAVKIPKEPTKWNS 573
Query: 455 EKTISLLYGEL--RKWTSKCSF----QIGPIHVVDEPF 486
K I+ + + K ++K F +I +H++ + F
Sbjct: 574 SKEITTFFKNIVKDKISTKAGFKSFEKIAHVHILSKEF 611
>gi|421107360|ref|ZP_15567912.1| AMP-binding enzyme [Leptospira kirschneri str. H2]
gi|410007376|gb|EKO61086.1| AMP-binding enzyme [Leptospira kirschneri str. H2]
Length = 645
Score = 214 bits (546), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 133/458 (29%), Positives = 231/458 (50%), Gaps = 20/458 (4%)
Query: 36 ESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIV 95
E K+ D + E++ D+AT +YTSGTTG PKGVML H++ I + + V
Sbjct: 167 EGEKSRIKKGDKTYDQRGESLVGKDLATIIYTSGTTGAPKGVMLNHRSFTWGIHQIQEFV 226
Query: 96 PAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVY 155
P D+ + LPPWH+ ER + + G + +++ + D+Q+ +P ++SVP ++
Sbjct: 227 PGSYNDRTILFLPPWHIAERLLETTLIAWGASMACSSIPTIPADMQKVKPTVLVSVPRLW 286
Query: 156 ETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDW 215
E LY I + S ++ + ++I+ T + T + P+ L+D
Sbjct: 287 EGLYKRIHDTVRKSPLFKQKLFHFAVKIAEITTNLQDTIRDSYATTKTENPNQ--KLLDR 344
Query: 216 LWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVG 275
A + + P+ +L+ K++ + G + + G G++P HI F+ + G+ +
Sbjct: 345 FVASVFLISMIPIKILSYKILERVRDLFGGRIRFALCGAGAMPSHIQFFFRSAGIHIIET 404
Query: 276 YGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQ 335
YG+TE++ + A G++G P+ T IK+V V G KG+ +G V
Sbjct: 405 YGMTETTGIGAVGEFPIPKNGAIGAPLPGTAIKLVGENGKVVTTPGEKGVAWHKGPHVTM 464
Query: 336 GYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGEN 395
GY+K P T +AL +DGWL++GDI + H+ G L GRAKDTIVLS GEN
Sbjct: 465 GYYKEPEKTSKAL-QDGWLDSGDI--LTWTHT--------GELKFAGRAKDTIVLSGGEN 513
Query: 396 VEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI-VHADASELSK 454
+EP +E S I Q++V+GQD++ G +IVP + V + ++ + + ++ +
Sbjct: 514 LEPAPIEAKLTESEFINQVIVVGQDRKNLGVLIVPFFDRVQEEFQNQAVKIPKEPTKWNS 573
Query: 455 EKTISLLYGEL--RKWTSKCSF----QIGPIHVVDEPF 486
K I+ + + K ++K F +I +H++ + F
Sbjct: 574 SKEITTFFKNIVKDKISTKAGFKSFEKIAHVHILSKEF 611
>gi|421094230|ref|ZP_15554950.1| AMP-binding enzyme [Leptospira borgpetersenii str. 200801926]
gi|410362956|gb|EKP13989.1| AMP-binding enzyme [Leptospira borgpetersenii str. 200801926]
gi|456887901|gb|EMF98914.1| AMP-binding enzyme [Leptospira borgpetersenii str. 200701203]
Length = 645
Score = 214 bits (546), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 141/461 (30%), Positives = 229/461 (49%), Gaps = 26/461 (5%)
Query: 36 ESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIV 95
E K+ D + E + D+AT +YTSGTTG PKGVML H++ I L + V
Sbjct: 167 EGEKSRLKKGDKVYTQRGEILIGKDLATIIYTSGTTGTPKGVMLNHRSFTWGIHQLQEFV 226
Query: 96 PAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVY 155
P D+ + LPPWH+ ER + + G + +++ + D+QR +P ++SVP ++
Sbjct: 227 PCSCNDRTIIFLPPWHIAERLLETALIAWGASMACSSIPTIPADMQRVKPTVLVSVPRLW 286
Query: 156 ETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDW 215
E LY I + + R+ + +R++ T+ + T + P ID
Sbjct: 287 EGLYKRIHDTVRKAPPLRQKLFHIAVRMAEITTSLQDTIRDSYTTIEIENPRQ--KTIDR 344
Query: 216 LWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVG 275
A L+P+ +L+ K++ + G + + G G++P HI F+ + G+ +
Sbjct: 345 FVASAFLLFLYPIKILSYKILQRVRDLFGGRIRFALCGAGAMPPHIQFFFRSAGIPIIET 404
Query: 276 YGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQ 335
YG+TE++ + A G++G P+ T IK+V + G KGI +G V
Sbjct: 405 YGMTETTGIGAIGEFPLPKNGAIGAPLPGTAIKLVGEDGKIATAPGEKGIAWHKGPHVTV 464
Query: 336 GYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGEN 395
GY+K P T + L +DGWL++GDI + H+ G L GRAKDTIVLS GEN
Sbjct: 465 GYYKEPEKTAKTL-QDGWLDSGDI--LTWTHT--------GELKFAGRAKDTIVLSGGEN 513
Query: 396 VEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVP--DK--EEVLMAAKRLSIVHADASE 451
+EP +E S I Q++V+GQD++ G +IVP D+ EE K+L D +E
Sbjct: 514 LEPAPIEAKLTESEFINQVIVVGQDKKNLGVLIVPFFDRVYEEFQSQGKKLP---KDPTE 570
Query: 452 LSKEKTISLLYGEL--RKWTSKCSF----QIGPIHVVDEPF 486
+ K ++ + + K ++K F +I IH++ + F
Sbjct: 571 WNSSKEVNSFFKNIVKDKISTKAGFKSFEKIAHIHLLPKEF 611
>gi|418684399|ref|ZP_13245584.1| AMP-binding enzyme [Leptospira kirschneri serovar Grippotyphosa
str. Moskva]
gi|418740695|ref|ZP_13297072.1| AMP-binding enzyme [Leptospira kirschneri serovar Valbuzzi str.
200702274]
gi|410741098|gb|EKQ85811.1| AMP-binding enzyme [Leptospira kirschneri serovar Grippotyphosa
str. Moskva]
gi|410752072|gb|EKR09048.1| AMP-binding enzyme [Leptospira kirschneri serovar Valbuzzi str.
200702274]
Length = 553
Score = 214 bits (545), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 156/442 (35%), Positives = 222/442 (50%), Gaps = 81/442 (18%)
Query: 5 ILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATY 64
I++ K SS + +I YD +I+ GR R S + R E I +D+ T
Sbjct: 133 IIIMDKSSSAKGKHIHKI----YD-LIEEGRSLRAKGSKKAEKR----IEEIKPEDLFTL 183
Query: 65 VYTSGTTGNPKGVMLTHKNLLHQIRS-----LYDIVPAENGDKFLSMLPPWHVYERACGY 119
+YTSGTTG PKGVML H N++HQ+ L DI P D LS+LP WH++ER Y
Sbjct: 184 IYTSGTTGMPKGVMLMHSNMIHQMVHVVPMLLTDIKPT---DSMLSILPIWHIFERVNEY 240
Query: 120 FIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIF---TSSAARRVV 176
S GI+ YT V +L++DL + +P +M S P V+E +Y+ I ++ + RR++
Sbjct: 241 GAISSGIQTYYTKVADLRNDLAKAKPSFMASAPRVWENVYANIYNKVNDPKQTPTIRRIL 300
Query: 177 ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLA---- 232
+ S Y A +R G L + + + L +L+ + + II + P L A
Sbjct: 301 FKLAYFFSKHYNASRRFLNG--LEVDYENRNILKSLVIGIKSLIILLLTGPFTLSAISIL 358
Query: 233 --------------------------------EKLVYKKIQSAIGIS-KAGVSGGGSLPM 259
+ +V KI++A G KA +SGGG+L
Sbjct: 359 AYLTIPVYGAHLPNWIFFSLAGLGLVFNAKTLDTIVLSKIRAATGGRLKASLSGGGALQS 418
Query: 260 HIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETN---- 315
H+D F+ IG+ V GYG+TE+SPVI+ R ++GSVG + +E+ I D N
Sbjct: 419 HVDNFFNDIGMLVLEGYGMTETSPVISVRPFVKPIIGSVGFLVPKSELIIKDENGNVLTH 478
Query: 316 -----EVLPA--GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSR 368
EVL G KGIV V+G QVM+GY+KNP TK+ + DGW+NTGDIG+I
Sbjct: 479 INDQFEVLAGKLGQKGIVFVKGPQVMKGYYKNPEVTKKTI-VDGWMNTGDIGFI------ 531
Query: 369 GRSRRCGGVLVLEGRAKDTIVL 390
L L GRAKDT+VL
Sbjct: 532 ----NFKKTLTLTGRAKDTVVL 549
>gi|421097581|ref|ZP_15558266.1| AMP-binding enzyme [Leptospira borgpetersenii str. 200901122]
gi|410799408|gb|EKS01483.1| AMP-binding enzyme [Leptospira borgpetersenii str. 200901122]
Length = 645
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 138/443 (31%), Positives = 226/443 (51%), Gaps = 26/443 (5%)
Query: 54 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 113
E + D+AT +YTSGTTG PKGVML H++ I L + VP D+ + LPPWH+
Sbjct: 185 EILIGKDLATIIYTSGTTGAPKGVMLNHRSFTWGIHQLQEFVPCSCNDRTIIFLPPWHIA 244
Query: 114 ERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 173
ER + + G + +++ + D+Q+ +P ++SVP ++E LY I + + +
Sbjct: 245 ERLLETTLIAWGASMACSSIPTIPADMQKVKPTVLVSVPRLWEGLYKRIHDTVRKAPPLK 304
Query: 174 RVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAE 233
+ + +R++ T+ + T + P ID A L+P+ +L+
Sbjct: 305 QKLFHVAVRMAEITTSLQDTIRDSYTTIEIENPRQ--KTIDRFVASAFLLFLYPIKILSY 362
Query: 234 KLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCN 293
K++ + G + + G G++P HI F+ + G+ + YG+TE++ + A
Sbjct: 363 KILQRVKDLFGGRIRFALCGAGAMPPHIQFFFRSAGIPIIETYGMTETTGIGAIGEFPLP 422
Query: 294 VLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGW 353
G++G P+ T IK+V + V G KGI +G V GY+K P T +AL +DGW
Sbjct: 423 KNGAIGAPLPGTAIKLVGEDGRIVTAPGEKGIAWHKGPHVTVGYYKEPEKTAKAL-QDGW 481
Query: 354 LNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQ 413
L++GDI + H+ G L GRAKDTIVLS GEN+EP +E S I Q
Sbjct: 482 LDSGDI--LTWTHT--------GELKFAGRAKDTIVLSGGENLEPAPIEAKLTESEFISQ 531
Query: 414 IVVIGQDQRRPGAIIVP--DK--EEVLMAAKRLSIVHADASELSKEKTISLLYGEL--RK 467
++V+GQD++ G +IVP D+ EE K+L D +E + K +S + + K
Sbjct: 532 VIVVGQDKKNLGVLIVPFFDRVYEEFQSKEKKLP---KDPTEWNSSKEVSSFFKNIVKDK 588
Query: 468 WTSKCSF----QIGPIHVVDEPF 486
++K F +I I+++ + F
Sbjct: 589 ISTKAGFKSFEKIAHIYILPKEF 611
>gi|159466184|ref|XP_001691289.1| long-chain-fatty-acid CoA ligase [Chlamydomonas reinhardtii]
gi|158279261|gb|EDP05022.1| long-chain-fatty-acid CoA ligase [Chlamydomonas reinhardtii]
Length = 555
Score = 212 bits (540), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 133/366 (36%), Positives = 192/366 (52%), Gaps = 85/366 (23%)
Query: 76 GVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN 135
GVMLTH NL +Q+R+L + GD+ LS+LPPWH+YER C
Sbjct: 175 GVMLTHANLCYQVRNLSHFLQVRPGDRVLSLLPPWHIYERTCS----------------- 217
Query: 136 LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYE 195
Y L SG Q+ YT +R+ +
Sbjct: 218 -------------------YFVLSSGGQQ---------------------VYTNIRRLRD 237
Query: 196 GFCLTRNQKQPSYLVAL---IDWLWARIICAI-LWPLHLLAEK---------------LV 236
P +LV + +D L AR++ I P H A LV
Sbjct: 238 DLV----AHPPDHLVCVPLVLDTLHARVVQKIQAGPRHRAAIATALLAAGAAYALASVLV 293
Query: 237 YKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPT--CNV 294
Y+K++ A+G+ + +SGGGSL H+D FYEA+G++V G+GL+E++PV+A RR N+
Sbjct: 294 YRKVREALGVRRTVISGGGSLAAHLDDFYEALGLQVLNGWGLSETAPVLACRRAVEGQNI 353
Query: 295 LGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDE-DGW 353
GSVG P T++++VD E+ LPAG +G+V RG VM GY+++P+A+ +A GW
Sbjct: 354 RGSVGVPTPGTQLRVVDPESLAPLPAGRQGLVLARGPGVMPGYWQDPAASAKAFRAGGGW 413
Query: 354 LNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQ 413
+TGD+GW+AP + C G LVL GRAKDT+VLS+G+NVEP +E+A S LI+
Sbjct: 414 FDTGDLGWVAPEGVPASN--CAGHLVLTGRAKDTLVLSSGKNVEPQPVEDAVAASPLIKF 471
Query: 414 IVVIGQ 419
+V++GQ
Sbjct: 472 VVLVGQ 477
>gi|194333847|ref|YP_002015707.1| AMP-dependent synthetase and ligase [Prosthecochloris aestuarii DSM
271]
gi|194311665|gb|ACF46060.1| AMP-dependent synthetase and ligase [Prosthecochloris aestuarii DSM
271]
Length = 607
Score = 211 bits (537), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 144/446 (32%), Positives = 224/446 (50%), Gaps = 53/446 (11%)
Query: 29 EIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI 88
E+ + + +K +++ D Y+ I DDIAT +YTSGTTG PKGVMLTH+N+ I
Sbjct: 156 ELSEAKKRGKKILAETPD---FVSYQMIKPDDIATIIYTSGTTGVPKGVMLTHRNICENI 212
Query: 89 RSLYDIVPAENGDKFLSMLPPWHVYERACGYF-IFSRGIEL-MYTAVRNLKDDLQRYQPH 146
+S I+ + D+ LS LP H YER GY+ +F+ G + + ++ + ++ +P
Sbjct: 213 KSCSTIIRLDESDRSLSFLPLSHAYERTGGYYLLFACGAAIYLAESIETVSLNIAEAKPT 272
Query: 147 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 206
+ +VP +++ + + I KQI S ++ +I+ C T Q
Sbjct: 273 IIFTVPRLFDRIRTNILKQIANESPVKQ-----------------KIFNWACSTGMQYHK 315
Query: 207 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFY 265
S I L H +AEKLVY KI G S + VSGG +LP + F+
Sbjct: 316 SSEKGK--------ISPTLTLQHKVAEKLVYHKISQKFGGSLRFFVSGGAALPQKVGEFF 367
Query: 266 EAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGI 325
+ +G+ + G+GLTE+SPV RP G+VG +N+ EI I S G
Sbjct: 368 QGLGITILEGFGLTETSPVTNVNRPENVKFGTVGPVVNNVEISI-----------ASDGE 416
Query: 326 VKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAK 385
+ RG +M+GY+ + +ATK+ + DGW +TGDIG + G L + R K
Sbjct: 417 ILFRGPSIMKGYWNDEAATKEVI-YDGWFHTGDIGELDED----------GYLRITDRKK 465
Query: 386 DTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIV 445
IV S G+N+ PL +E S + Q++V+G+ + A+IVP+ E+ A+ I
Sbjct: 466 HIIVTSGGKNIAPLPIEHLIAESPYVDQVMVVGEKRPFLTALIVPNYNELKNYAEENDIS 525
Query: 446 HADASELSKEKTISLLYGELRKWTSK 471
A SEL K+K I+ L+ L + S+
Sbjct: 526 SASGSELLKDKQINKLFENLLRTVSR 551
>gi|183219534|ref|YP_001837530.1| long-chain-fatty-acid--CoA ligase [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
gi|189909676|ref|YP_001961231.1| long-chain-fatty-acid--CoA ligase [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167774352|gb|ABZ92653.1| Long-chain-fatty-acid--CoA ligase [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167777956|gb|ABZ96254.1| Long-chain-fatty-acid--CoA ligase [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
Length = 641
Score = 209 bits (531), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 155/449 (34%), Positives = 223/449 (49%), Gaps = 38/449 (8%)
Query: 60 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDI-----VPAENGDKFLSMLPPWHVYE 114
D+AT +YTSGTTG PKGVMLTH ++L +I++L V GD L LPPWH E
Sbjct: 184 DLATIIYTSGTTGKPKGVMLTHGSILFEIQALVSEFRKTGVKVGEGDVTLGFLPPWHSGE 243
Query: 115 RACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARR 174
R F GI++ +T+V L DL + +P + +VP V+E+ Y I+ I S ++
Sbjct: 244 RIFETICFYSGIKIAFTSVPELGKDLAKAKPTILFTVPRVWESFYDKIKDTIQKSHWIKK 303
Query: 175 VVARALI--RISFAYT---AFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLH 229
+ L+ + F+ T AF RI P I ++ I I PL
Sbjct: 304 YFLKLLVWNSVQFSITYDKAFDRIPRLIT-------PKTFSLYILQIFNCIKLMIYLPL- 355
Query: 230 LLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAAR 288
L K V KI S +G + +G G+L +D F AIG+ + YG+TE+S V R
Sbjct: 356 LPISKFVLSKILSVLGGRLRYAFAGAGALQAEVDRFMYAIGMPILEVYGMTENSGVSTIR 415
Query: 289 RPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQAL 348
+G+VG PI IK++D E+ G KG+ G M+GY+ TK L
Sbjct: 416 HYNDFSVGNVGKPIQGVTIKLIDEFGKEIRKPGIKGVALHHGRHNMKGYYLEEEKTKAVL 475
Query: 349 DEDGWLNTGD-IGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALR 407
+D WLN+GD + W G L GRAKDTIVLS GENVEP +E +
Sbjct: 476 TDDRWLNSGDLLVWTTQ-----------GNLKFAGRAKDTIVLSGGENVEPEPIEICLKQ 524
Query: 408 SSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTI--SLLYGEL 465
S I Q VV+GQD++ A+I+ + E+V K SI + + +E I L+ E+
Sbjct: 525 SDYIDQAVVVGQDKKTLSALIILNLEKVETYLKEQSINMNLKNSIYQEVEIIQKLIRNEV 584
Query: 466 RKWTS-KCSFQ----IGPIHVVDEPFTVN 489
+ + S K F+ I ++++ PF V+
Sbjct: 585 KHFVSDKNGFKSFERISNVYILQNPFVVH 613
>gi|322368270|ref|ZP_08042839.1| AMP-dependent synthetase and ligase [Haladaptatus paucihalophilus
DX253]
gi|320552286|gb|EFW93931.1| AMP-dependent synthetase and ligase [Haladaptatus paucihalophilus
DX253]
Length = 653
Score = 207 bits (527), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 141/415 (33%), Positives = 208/415 (50%), Gaps = 54/415 (13%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLY---------DIVPAENGDKFLSMLPP 109
DD+AT +YTSGTTG PKGV LTH N + Y ++ + K +S LP
Sbjct: 215 DDLATLIYTSGTTGKPKGVRLTHWNFRSNVNQCYRRFGPRPDKEVPVVDQHSKTVSFLPL 274
Query: 110 WHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIF 167
HV+ER G+F+ F+ G + Y + L+DD + +P SVP VYE +Y I+ Q
Sbjct: 275 AHVFERTAGHFMMFAAGATVAYAESPDTLQDDFRAVRPTTGTSVPRVYERIYDAIRSQAD 334
Query: 168 TSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWP 227
S RR+ A + AY G R QK
Sbjct: 335 ESDLKRRIFEWA-TDVGKAYHEVDSPGVGL---RAQK----------------------- 367
Query: 228 LHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIA 286
LLA+KLV+ +++ +G + + +SGGGSL + Y +G+ + GYGLTE+SPVI+
Sbjct: 368 --LLADKLVFDQVKDGLGGNIEFFISGGGSLSADLCALYHGMGLPILEGYGLTETSPVIS 425
Query: 287 ARRPTCNVLGSVGHPINHTEIKIVDAETNEVL--PAGSKGIVKVRGSQVMQGYFKNPSAT 344
P +G++G+P+ ++K+ D+ E AG G + V+G V GY+ P T
Sbjct: 426 VNPPEAPEIGTIGYPVVDEKVKVDDSVVGEQFSDAAGEVGELLVKGPNVTDGYWNKPEET 485
Query: 345 KQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEA 404
+QA EDGW TGDI I P G + RAK+ +VLSTG+NV P +E+A
Sbjct: 486 EQAFTEDGWFRTGDIVEIRPD----------GYIAFRERAKELLVLSTGKNVAPGPIEDA 535
Query: 405 ALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI-VHADASELSKEKTI 458
S ++ Q +V+G ++ A+IVP+ EEV A R + + D EL ++ T+
Sbjct: 536 FAASDIVEQCLVMGDGRKFVSALIVPNVEEVRERAAREGLSLPDDDRELCRDDTV 590
>gi|282898837|ref|ZP_06306824.1| hypothetical protein CRC_00129 [Cylindrospermopsis raciborskii
CS-505]
gi|281196364|gb|EFA71274.1| hypothetical protein CRC_00129 [Cylindrospermopsis raciborskii
CS-505]
Length = 289
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 116/263 (44%), Positives = 158/263 (60%), Gaps = 29/263 (11%)
Query: 245 GISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINH 304
G K +SGGG+LP HID F+E IGV++ GYGLTE+SPV ARR N+ GS G PI
Sbjct: 7 GKIKQVISGGGALPRHIDNFFEMIGVEILQGYGLTETSPVTNARRIWRNLRGSSGQPIAG 66
Query: 305 TEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAP 364
T++KIV ET + LP G G+V ++G QVM GY++N ATKQ +D DGW N+GD+GW+ P
Sbjct: 67 TQVKIVHPETKDPLPPGKIGLVLLKGPQVMGGYYQNLEATKQVIDNDGWFNSGDLGWVTP 126
Query: 365 HHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRP 424
+ LVL GRAKDTIVLS GEN+EP +E+A LRS I QI+++GQDQR
Sbjct: 127 END----------LVLTGRAKDTIVLSNGENIEPQPIEDACLRSPYIDQIMLVGQDQRSL 176
Query: 425 GAIIVP--DKEEVLMAAKRLSIVHADASELSKEKTI------------SLLYGELRKWTS 470
GA+IVP D E + +++ D S ++++ I L EL +
Sbjct: 177 GALIVPNLDALEKWAEVENINLPTQDDSTENEDQKIGQKIDLENKIIQDLYRKELNREVQ 236
Query: 471 -----KCSFQIGPIHVVDEPFTV 488
+ +IGP ++ EPF++
Sbjct: 237 NRPGYRVDDRIGPFKLIPEPFSM 259
>gi|110597451|ref|ZP_01385738.1| AMP-dependent synthetase and ligase [Chlorobium ferrooxidans DSM
13031]
gi|110340995|gb|EAT59466.1| AMP-dependent synthetase and ligase [Chlorobium ferrooxidans DSM
13031]
Length = 610
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 143/436 (32%), Positives = 226/436 (51%), Gaps = 52/436 (11%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 118
DD+AT +YTSGTTG PKGVMLTH+NL I+S I+ + D LS LP H YER G
Sbjct: 183 DDVATIIYTSGTTGLPKGVMLTHRNLCENIKSCSSIIRLDESDCGLSFLPLSHAYERTGG 242
Query: 119 YFI-FSRGIEL-MYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 176
Y++ FS G + + ++ + ++ +P + +VP +++ + I KQI + +A ++ +
Sbjct: 243 YYLLFSCGASIYLAESIETISMNMAEARPTIIFTVPRLFDRIKMSIIKQISSQNAIKQKI 302
Query: 177 ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLV 236
++ E + N+K + A+L H LAEKLV
Sbjct: 303 FYWAVQTG----------EKYHRQLNEKGR--------------VTALLSLQHTLAEKLV 338
Query: 237 YKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVL 295
Y+KI+ G + VSGG +LP I F++A+ + + G+GLTE+SPV RP
Sbjct: 339 YEKIKHKFGGRLRYFVSGGAALPQKIGEFFQALEISILEGFGLTETSPVTHVNRPEKIKY 398
Query: 296 GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLN 355
G+VG +N+ +KI AE E+L ++G +M+GY+K+ AT++ + DGW
Sbjct: 399 GTVGPAVNNVTVKI--AEDGEIL---------LKGPNIMKGYWKDEEATREVI-RDGWFC 446
Query: 356 TGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIV 415
TGDIG I G L + R K IV S G+N+ PL +E S + Q++
Sbjct: 447 TGDIGEIDKD----------GYLKITDRKKHIIVTSGGKNIAPLPIENLISESPFVDQVI 496
Query: 416 VIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSK---C 472
VIG+ + A+IVPD E+++ A I A EL + K++ +Y +L + S+
Sbjct: 497 VIGEKRPFLIALIVPDFEKLMEYASSEGIQAATNKELIESKSVIQIYDKLMRTISRQLAT 556
Query: 473 SFQIGPIHVVDEPFTV 488
++ ++D+ FTV
Sbjct: 557 HEKVRKFLLIDDAFTV 572
>gi|359689869|ref|ZP_09259870.1| long-chain-fatty-acid--CoA ligase [Leptospira licerasiae serovar
Varillal str. MMD0835]
gi|418748860|ref|ZP_13305152.1| AMP-binding enzyme [Leptospira licerasiae str. MMD4847]
gi|418757738|ref|ZP_13313925.1| AMP-binding enzyme [Leptospira licerasiae serovar Varillal str. VAR
010]
gi|384115515|gb|EIE01773.1| AMP-binding enzyme [Leptospira licerasiae serovar Varillal str. VAR
010]
gi|404275929|gb|EJZ43243.1| AMP-binding enzyme [Leptospira licerasiae str. MMD4847]
Length = 642
Score = 205 bits (521), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 130/388 (33%), Positives = 194/388 (50%), Gaps = 17/388 (4%)
Query: 50 HYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPP 109
H E++ +DIAT +YTSGTTG PKGV+L H++ I L VPA D+ + LPP
Sbjct: 182 HSVGESLTENDIATIIYTSGTTGVPKGVVLKHRSFTWTINQLQQFVPANYSDRVVVFLPP 241
Query: 110 WHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTS 169
WH+ ER + S G L + V L D + +P ++SVP V+E LY I ++ S
Sbjct: 242 WHIAERILETALLSWGASLACSNVSQLTRDFEIIKPTVLVSVPRVWEALYRRIWDKVSKS 301
Query: 170 SAARRVVARALIRISFAYTA-FKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPL 228
S + + + +RI+ Y + + + T N + L D + + ++ + + L
Sbjct: 302 SPTKLAIFKTAVRIAETYNSLLDTVIGNYSETENSNKEE---KLTDTVVSVLLLPLFYFL 358
Query: 229 HLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAAR 288
++LA+K++ G K G G++P I F+ ++GV + YG+TE++ + A
Sbjct: 359 NILAQKVLAPVRALFGGQLKFAFCGAGAMPPKIQFFFRSMGVPIIETYGMTETTGMGALG 418
Query: 289 RPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQAL 348
GS+G IK+V + V G KGI +G V GY+KN T+
Sbjct: 419 SFPIPKTGSIGQVFPGAHIKLVGEQNEVVSKPGDKGIAWHKGPHVTAGYYKNEELTRSNF 478
Query: 349 DEDGWLNTGDIG-WIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALR 407
DGW N+GD+ W G L GRAKDTIVLS+GENVEP +E L
Sbjct: 479 -VDGWFNSGDLFVWTKT-----------GELKFAGRAKDTIVLSSGENVEPEPIEGKILE 526
Query: 408 SSLIRQIVVIGQDQRRPGAIIVPDKEEV 435
+ +VIGQDQ+ +IVPD +V
Sbjct: 527 TGWALTAIVIGQDQKFLAVLIVPDFAKV 554
>gi|189500240|ref|YP_001959710.1| AMP-dependent synthetase and ligase [Chlorobium phaeobacteroides
BS1]
gi|189495681|gb|ACE04229.1| AMP-dependent synthetase and ligase [Chlorobium phaeobacteroides
BS1]
Length = 609
Score = 205 bits (521), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 147/466 (31%), Positives = 233/466 (50%), Gaps = 56/466 (12%)
Query: 29 EIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI 88
E+ + + R+ +S D + Y I DD AT +YTSGTTG PKGVMLTH+N+ +
Sbjct: 156 ELSEAKKAGREILENSPD---YVSYTMIKPDDTATIIYTSGTTGLPKGVMLTHRNICENV 212
Query: 89 RSLYDIVPAENGDKFLSMLPPWHVYERACGYF-IFSRGIEL-MYTAVRNLKDDLQRYQPH 146
+S I+ + D+ LS LP H YER GY+ +F+ G + + ++ + ++ +P
Sbjct: 213 KSCSSILRIDETDRSLSFLPLSHAYERTGGYYLLFACGARIYLAESIETVSLNIAEAKPT 272
Query: 147 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 206
+ +VP +++ + + I KQI T S ++ + Y K++ EG +P
Sbjct: 273 IIFTVPRLFDRIRTNILKQIKTQSPTKQKIFDWARATGIEYQ--KQLQEG--------KP 322
Query: 207 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFY 265
S ++AL H +A+KLVY KIQ G + + VSGG +LP I F+
Sbjct: 323 SMILAL---------------KHGIADKLVYTKIQERFGGNLRYFVSGGAALPRKIGEFF 367
Query: 266 EAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGI 325
+A G+ + GYGLTE+SPV RP G+VG +++ +KI S G
Sbjct: 368 QAFGITILEGYGLTETSPVTNVNRPEKVKFGTVGPVLDNVTLKI-----------ASDGE 416
Query: 326 VKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAK 385
V RG +M+GY+ + SAT + + DGW +TGDIG + G L + R K
Sbjct: 417 VLFRGPNIMKGYWNDESATGEVI-HDGWFHTGDIGELDED----------GYLKITDRKK 465
Query: 386 DTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIV 445
IV S G+N+ PL +EE +S + Q++VIG+ + A+IVP E++ A I
Sbjct: 466 HIIVTSGGKNIAPLPIEELIAENSYVDQVMVIGEKRPFLVALIVPVFSELVSFADEQQIT 525
Query: 446 HADASELSKEKTISLLYGELRKWTSK---CSFQIGPIHVVDEPFTV 488
L + K I +Y L + S+ ++ ++ EPF++
Sbjct: 526 SKTRESLLENKEILKIYESLLRTISRQLATHEKVRKFILIQEPFSI 571
>gi|193215784|ref|YP_001996983.1| AMP-dependent synthetase and ligase [Chloroherpeton thalassium ATCC
35110]
gi|193089261|gb|ACF14536.1| AMP-dependent synthetase and ligase [Chloroherpeton thalassium ATCC
35110]
Length = 607
Score = 205 bits (521), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 137/440 (31%), Positives = 222/440 (50%), Gaps = 53/440 (12%)
Query: 55 TIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYE 114
TI DDIAT +YTSGTTGNPKGVMLTH+N+ I+S I+P D LS LP H YE
Sbjct: 179 TISEDDIATLIYTSGTTGNPKGVMLTHRNICENIKSCSAILPLSEDDACLSFLPLSHAYE 238
Query: 115 RACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAA 172
R GY++ F+ GI++ Y ++ + ++ +P +I+VP ++E + S I K + +
Sbjct: 239 RTVGYYLMFACGIKIYYAESIETISLNISEVRPTVVITVPRLFERIKSSILKNVDNGAEV 298
Query: 173 RRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLA 232
R+ + + + + + A +R +Q + LA
Sbjct: 299 RKKLFYWALHLGYQHHADQRSGRSNFFVESQ-------------------------YALA 333
Query: 233 EKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPT 291
L+ K+I+ G + VSGG +LP LF+EA+G+ + G+GLTE++PV RP
Sbjct: 334 NLLILKQIRERFGGRLRFFVSGGAALPPDTGLFFEALGITILEGFGLTETAPVTHVNRPG 393
Query: 292 CNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDED 351
G+VG + + E+KI D G + +RG +M+GY+++ +AT + + +
Sbjct: 394 KVKFGTVGTLLKNVEVKIAD-----------DGEILLRGPNIMKGYWQDDAATAEVI-RN 441
Query: 352 GWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLI 411
GW +TGDIG I G L + R K IV S G+N+ PL +E + I
Sbjct: 442 GWFHTGDIGEIDSE----------GYLKITDRKKHIIVNSGGKNIAPLPIENRIHANKYI 491
Query: 412 RQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSK 471
Q +V+G+ + A+IVP+ E + AK+ + +++ EL I LY + + S+
Sbjct: 492 DQALVVGEKRPFLIALIVPNFENLEALAKQKGLAYSNFEELISHHEIYQLYTNILRDISR 551
Query: 472 ---CSFQIGPIHVVDEPFTV 488
++ ++ EPFT+
Sbjct: 552 ELASHERVRKFLLLSEPFTI 571
>gi|282896868|ref|ZP_06304874.1| hypothetical protein CRD_01572 [Raphidiopsis brookii D9]
gi|281198277|gb|EFA73167.1| hypothetical protein CRD_01572 [Raphidiopsis brookii D9]
Length = 289
Score = 204 bits (520), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 116/263 (44%), Positives = 158/263 (60%), Gaps = 29/263 (11%)
Query: 245 GISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINH 304
G K +SGGG+LP HID F+E IGV++ GYGLTE+SPV ARR N+ GS G PI
Sbjct: 7 GKIKQVISGGGALPRHIDNFFEIIGVEILQGYGLTETSPVTNARRIWRNLRGSSGQPIAG 66
Query: 305 TEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAP 364
T++KIV ET + LPAG G+V ++G QVM GY++N ATKQ +D GW N+GD+GW+ P
Sbjct: 67 TQVKIVHPETKDPLPAGKIGLVLLKGPQVMGGYYQNLEATKQVIDNHGWFNSGDLGWVTP 126
Query: 365 HHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRP 424
+ LVL GRAKDTIVLS GEN+EP +E+A LRS I QI+++GQDQR
Sbjct: 127 END----------LVLTGRAKDTIVLSNGENIEPQPIEDACLRSPYIDQIMLVGQDQRSL 176
Query: 425 GAIIVP--DKEEVLMAAKRLSIVHADASELSKEKTI------------SLLYGELRKWTS 470
GA+IVP D E + +++ D S ++++ I L EL +
Sbjct: 177 GALIVPNLDALEKWAEVENINLPTQDDSTENEDQKIGQKIDLENKIIQDLYRKELNREVQ 236
Query: 471 -----KCSFQIGPIHVVDEPFTV 488
+ +IGP ++ EPF++
Sbjct: 237 NRPGYRADDRIGPFKLILEPFSM 259
>gi|339484361|ref|YP_004696147.1| AMP-dependent synthetase and ligase [Nitrosomonas sp. Is79A3]
gi|338806506|gb|AEJ02748.1| AMP-dependent synthetase and ligase [Nitrosomonas sp. Is79A3]
Length = 609
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 143/437 (32%), Positives = 226/437 (51%), Gaps = 55/437 (12%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 118
D +AT +YTSGT+G PKGVML+H+N+L S ++P GD LS LP H +ER G
Sbjct: 190 DSLATIIYTSGTSGRPKGVMLSHRNILTNASSCLQVIPVFPGDLLLSFLPLSHTFERTAG 249
Query: 119 YFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 176
Y++ G + Y +++ L++DL +P +ISVP +YE +Y+GI+ ++ S R +
Sbjct: 250 YYVPMMAGATIAYARSIQQLQEDLLTIRPTLLISVPRIYERVYAGIRAKLAEGSGFARWL 309
Query: 177 ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLV 236
+ Y+ F+ +G R +P++ C LWP + EKLV
Sbjct: 310 FN--FAVDVGYSRFE-CQQG----RGSWRPAH-------------C--LWP---VLEKLV 344
Query: 237 YKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVL 295
K+ + +G + +SGG +L + + +G+ + GYG+TESSPV+ A R NV
Sbjct: 345 ASKVMNKLGGRLRFVMSGGAALSTEVSRIFIGLGLPILQGYGMTESSPVVCANRIKDNVP 404
Query: 296 GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLN 355
SVG PI E+K+ E N +L +RG VM GY+ NP ATK + DGWLN
Sbjct: 405 ASVGLPIPGVEVKL--GEGNALL---------IRGPNVMLGYWNNPEATKAIISSDGWLN 453
Query: 356 TGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIV 415
+GDI I + + GR K+ +VLSTGE V P ++E A LR L Q++
Sbjct: 454 SGDIASIDEQDH----------VTITGRLKEIVVLSTGEKVPPADMEAAILRDPLFDQVM 503
Query: 416 VIGQDQRRPGAIIV--PDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSKCS 473
+IG+ + ++V P ++ M L + +E +++ +L ++ TS+
Sbjct: 504 LIGEARSYLSVLVVLNPALQKDFMTQYGLD--GSLDNEQQRQQAEEILLNKVAHQTSEFP 561
Query: 474 --FQIGPIHVVDEPFTV 488
+I I V+ EP+++
Sbjct: 562 GYAKIRRIAVIPEPWSI 578
>gi|145219737|ref|YP_001130446.1| AMP-dependent synthetase and ligase [Chlorobium phaeovibrioides DSM
265]
gi|145205901|gb|ABP36944.1| AMP-dependent synthetase and ligase [Chlorobium phaeovibrioides DSM
265]
Length = 610
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 139/440 (31%), Positives = 221/440 (50%), Gaps = 52/440 (11%)
Query: 55 TIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYE 114
I DD AT +YTSGTTG PKGVMLTH+N+ ++S D++ + D LS LP H YE
Sbjct: 179 NISPDDTATLIYTSGTTGLPKGVMLTHRNICENVKSCSDLITLDETDCSLSFLPLSHAYE 238
Query: 115 RACGYFIFSRGIELMYTA--VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAA 172
R GY++ +Y A + + ++ +P + +VP +++ + + +QKQI T S
Sbjct: 239 RTGGYYLLFGCGAAIYLAESIETVSLNIAEAKPTIIFTVPRLFDRIRANMQKQIATESQL 298
Query: 173 RRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLA 232
++ + SFA + ++ K+ S +AL H L+
Sbjct: 299 KQRI------FSFALSTGEQYNRQMA-----KKGSVSLAL-------------KAAHALS 334
Query: 233 EKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPT 291
KLVYKKI + G + VSGG +LP ++ ++G+ + GYGLTE+SP+ RP
Sbjct: 335 RKLVYKKILAKFGGRLRYFVSGGAALPKETGEYFSSLGITILEGYGLTETSPITNVNRPE 394
Query: 292 CNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDED 351
G+VG + + EI+I D G + +G +M+GY+K+ AT + + +D
Sbjct: 395 KVKFGTVGPTVRNVEIRIAD-----------DGEILFKGPNIMKGYWKDVEATAEVI-KD 442
Query: 352 GWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLI 411
GW +TGDIG + G L + R K IV S G+N+ PL +E S +
Sbjct: 443 GWFHTGDIGRLDDD----------GYLTITDRKKHIIVTSGGKNIAPLPIEHLIAESPFV 492
Query: 412 RQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSK 471
Q++VIG+ + A+I+PD E++ A I A EL + K +S +Y +L + S+
Sbjct: 493 EQVIVIGEKRPFLIALIIPDFEKLREFAVTAGIGDATEKELLENKAVSQIYEKLLRSISR 552
Query: 472 ---CSFQIGPIHVVDEPFTV 488
++ +V EPFT+
Sbjct: 553 KLATHEKVRKFLLVAEPFTL 572
>gi|303257837|ref|ZP_07343847.1| putative long-chain-fatty-acid--CoA ligase [Burkholderiales
bacterium 1_1_47]
gi|330998741|ref|ZP_08322469.1| AMP-binding enzyme [Parasutterella excrementihominis YIT 11859]
gi|302859440|gb|EFL82521.1| putative long-chain-fatty-acid--CoA ligase [Burkholderiales
bacterium 1_1_47]
gi|329576238|gb|EGG57754.1| AMP-binding enzyme [Parasutterella excrementihominis YIT 11859]
Length = 610
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 145/449 (32%), Positives = 222/449 (49%), Gaps = 46/449 (10%)
Query: 52 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWH 111
K +I DD+A VYTSGTTG PKGVMLTH N+L ++S ++ + D FLS LP H
Sbjct: 175 KEVSIDPDDLAAIVYTSGTTGKPKGVMLTHDNVLSNVKSFSQVIDVGSDDVFLSFLPFSH 234
Query: 112 VYERACG-YFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTS 169
+ER YF G E+ + +V L +DL+ +P ++VP V+E +S I+ +
Sbjct: 235 TFERTVTFYFTLFLGAEVGFARSVLKLAEDLKIIRPTIFVAVPRVFEQFHSRIKASL--- 291
Query: 170 SAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLH 229
++ I + A A + FC PS + +D + +WP
Sbjct: 292 ------QSKGSIAATLADQAEMIGWRRFCRRNGLAVPSSSASWLD--------SFIWP-- 335
Query: 230 LLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARR 289
+L ++V G + ++GG +L I FY A+GV+++ GYGLTE+SPVI+ R
Sbjct: 336 MLESRIVLPIRDVFGGRLRIAIAGGAALNNAIGRFYNAMGVELRQGYGLTETSPVISVNR 395
Query: 290 PTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALD 349
CN +VG PI +I++ D E ++V+G VM+GY+K P AT +
Sbjct: 396 ENCNNPVTVGQPIPGLQIRLGDIEE-----------LQVKGPTVMKGYWKRPDATAEVFT 444
Query: 350 EDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSS 409
EDGW TGD A GR R ++GR K+ IV STGE + P ++E A
Sbjct: 445 EDGWFRTGD---QADLSDAGRIR-------IKGRIKEIIVTSTGEKIPPTDMELAIQTDP 494
Query: 410 LIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWT 469
L Q++V+G+ + A+ V ++ E AK ++ +D L + L+K
Sbjct: 495 LFEQVMVVGEARPFITALAVVNEAEWEKFAKEFNVDPSDDRMLMRRDIRMAALKRLKKAA 554
Query: 470 SKCSFQIG---PIHVVDEPFTVNFLCLAL 495
S+ Q G I ++ E +TV+ CL +
Sbjct: 555 SRFP-QYGIPRNIRLLKEHWTVDNGCLTV 582
>gi|325982123|ref|YP_004294525.1| long-chain-fatty-acid--CoA ligase [Nitrosomonas sp. AL212]
gi|325531642|gb|ADZ26363.1| Long-chain-fatty-acid--CoA ligase [Nitrosomonas sp. AL212]
Length = 618
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 144/437 (32%), Positives = 221/437 (50%), Gaps = 55/437 (12%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 118
D +AT +YTSGT+G PKGVML+H N+L S +VP D LS LP H +ER G
Sbjct: 199 DSLATIIYTSGTSGRPKGVMLSHHNILSNAFSCLQVVPVLPEDVLLSFLPLSHTFERTAG 258
Query: 119 YFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 176
Y++ G + Y ++ L++DL +P MISVP +YE +Y+GIQ ++ R +
Sbjct: 259 YYVPMMTGATIAYARSIPQLQEDLLIIRPTIMISVPRIYERVYAGIQAKLAEGPGFARWL 318
Query: 177 ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLV 236
+ Y+ F+ C Q+ Y R + ++WP L +K V
Sbjct: 319 FN--FAVDVGYSRFE------C----QQGRGY----------RRLSHVVWP---LLKKWV 353
Query: 237 YKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVL 295
K+ +G + +SGG +L + + +G+ + GYG+TESSPV+ A R NV
Sbjct: 354 ADKVMGKLGGRLRMVMSGGAALSPQVSRVFIGLGLPILQGYGMTESSPVVCANRLEDNVP 413
Query: 296 GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLN 355
SVG PI E+K+ E+N +L +RG VM GY+ NP AT+ + DGWLN
Sbjct: 414 ASVGLPIPGVEVKL--GESNALL---------IRGPNVMLGYWNNPEATQAVISSDGWLN 462
Query: 356 TGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIV 415
+GDI I G + + GR K+ IVLSTGE V P ++E A LR L Q++
Sbjct: 463 SGDIASIDAQ----------GHVTITGRLKEIIVLSTGEKVPPADMEAAILRDPLFEQVM 512
Query: 416 VIGQDQRRPGAIIV--PDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSKCS 473
+IG+ + ++V P + + MA L +E +++ +L ++ + TS+
Sbjct: 513 LIGESRSYLSVLVVLNPARRQDFMAHYGLG--DDLTNEQQRQQAEEILLEKITRQTSEFP 570
Query: 474 --FQIGPIHVVDEPFTV 488
+I + V EP++V
Sbjct: 571 GYAKIRRVAVAQEPWSV 587
>gi|114330717|ref|YP_746939.1| AMP-dependent synthetase and ligase [Nitrosomonas eutropha C91]
gi|114307731|gb|ABI58974.1| AMP-dependent synthetase and ligase [Nitrosomonas eutropha C91]
Length = 612
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 127/377 (33%), Positives = 194/377 (51%), Gaps = 49/377 (12%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 118
D +AT +YTSGTTG PKGVML+H N+L + IV D LS LP H +ER G
Sbjct: 193 DSLATIIYTSGTTGRPKGVMLSHHNILSNAHACAQIVTVTPDDILLSFLPLSHTFERTAG 252
Query: 119 YFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 176
Y+ G + Y + R L +DL +P +ISVP +YE +Y GIQ+++ SA R++
Sbjct: 253 YYTPMLCGATIAYARSTRQLSEDLLIIRPTILISVPRIYERIYVGIQEKLAEGSAVARLL 312
Query: 177 ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLV 236
+ + + ++ +++ G+ ++ +LWP L ++L+
Sbjct: 313 FKLAVDVGYSRFEYQQGRTGWRISH----------------------LLWP---LLDRLI 347
Query: 237 YKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVL 295
+K+ +G V SGG +L + + A+G+ + GYGLTE+SPV+ A R NV
Sbjct: 348 ARKVMEKLGGRLWQVMSGGAALSPEVSHTFIALGLPILQGYGLTETSPVVCANRLNDNVP 407
Query: 296 GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLN 355
SVG PI E+K+ G + + +RG VM GY+ NP AT L DGWL+
Sbjct: 408 ASVGKPIPGVEVKL-----------GEQNALLIRGPNVMLGYWNNPEATSAILSADGWLD 456
Query: 356 TGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIV 415
+GD I +GR + + GR KD IV STGE + P ++E A L + Q++
Sbjct: 457 SGDTAQI---DEQGR-------ITITGRLKDIIVTSTGEKIPPADMEAAILHDPIFEQVM 506
Query: 416 VIGQDQRRPGAIIVPDK 432
+IG+ + A++V K
Sbjct: 507 IIGEGRSYLSALVVLSK 523
>gi|30249519|ref|NP_841589.1| AMP-dependent synthetase and ligase [Nitrosomonas europaea ATCC
19718]
gi|30138882|emb|CAD85460.1| AMP-dependent synthetase and ligase [Nitrosomonas europaea ATCC
19718]
Length = 612
Score = 202 bits (513), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 132/375 (35%), Positives = 195/375 (52%), Gaps = 49/375 (13%)
Query: 61 IATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF 120
+AT +YTSGTTG PKGVML+H N+L S +V D LS LP H +ER GY+
Sbjct: 195 LATIIYTSGTTGRPKGVMLSHNNILSNAYSSAQVVTVRPDDVLLSFLPLSHTFERTAGYY 254
Query: 121 I-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 178
+ G + Y ++R L+DDL +P +ISVP +YE +Y+GIQ ++ A R++ +
Sbjct: 255 VPMLCGATVAYARSIRQLQDDLLIIRPTILISVPRIYERIYAGIQAKLAEGPAISRLLFK 314
Query: 179 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 238
+ + Y+ F+ R QK+ + W I +LWP L +KLV +
Sbjct: 315 --LAVDIGYSRFE---------RQQKR-------VGWR----ISHLLWP---LLDKLVAR 349
Query: 239 KIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 297
K+ +G V SGG +L I + +G+ + GYGLTE+SPV+ A R N+ S
Sbjct: 350 KVMEKLGGRLWQVMSGGAALSPEISRVFIGLGLPILQGYGLTETSPVVCANRLDDNLPSS 409
Query: 298 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 357
VG P E+++ G + + +RG VM GY+ NP AT L DGWLN+G
Sbjct: 410 VGRPAPGVEVRL-----------GEQNALLIRGPNVMLGYWNNPEATHAILSADGWLNSG 458
Query: 358 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 417
D I +SR + + GR KD IV STGE + P ++E A LR + Q++++
Sbjct: 459 DTASI-----DAQSR-----VTITGRLKDIIVTSTGEKIPPADMEAAILRDPIFEQVMIV 508
Query: 418 GQDQRRPGAIIVPDK 432
G+ + A+ V K
Sbjct: 509 GEGRSYLSALTVLSK 523
>gi|119357321|ref|YP_911965.1| AMP-dependent synthetase and ligase [Chlorobium phaeobacteroides
DSM 266]
gi|119354670|gb|ABL65541.1| AMP-dependent synthetase and ligase [Chlorobium phaeobacteroides
DSM 266]
Length = 610
Score = 202 bits (513), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 151/500 (30%), Positives = 242/500 (48%), Gaps = 70/500 (14%)
Query: 4 IILLWGKKSSVAPDIVEEIPVFSYDEIIDLGR---------ESRKAFSDSNDARKHYKYE 54
II +W K ++ IV + DE++DL + E + D D
Sbjct: 128 IISIWQKLPDLSLVIVMNRLEETIDEVVDLNQVKDEGKTILEKKPWLLDGID-------- 179
Query: 55 TIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYE 114
+ DDIAT +YTSGTTG PKGVMLTH+NL ++S ++ + D+ LS LP H YE
Sbjct: 180 -VEPDDIATLIYTSGTTGLPKGVMLTHRNLCENVKSCSTVIRLDETDRSLSFLPLSHAYE 238
Query: 115 RACGYFI-FSRGIEL-MYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAA 172
R GY++ FS G + + +V + ++ +P + +VP +++ + + KQI SA
Sbjct: 239 RTGGYYLLFSCGAAIYLAESVETVSLNIAEARPTIIFTVPRLFDRIKANTLKQIGNESAI 298
Query: 173 RRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLA 232
++ + + E F N K + L + H LA
Sbjct: 299 KQKIFFWALHTG----------EEFHRQMNAKGKAALAVSMQ--------------HSLA 334
Query: 233 EKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPT 291
+KLVY KI+ G + VSGG +LP + F++A+ + + GYGLTE+SPV RP
Sbjct: 335 DKLVYAKIRKKFGGKLRYFVSGGAALPQKVGEFFQALSINILEGYGLTETSPVTNVNRPE 394
Query: 292 CNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDED 351
LG+VG +N+ +I+I D G + ++G +M+GY+++ AT++ + +D
Sbjct: 395 KIKLGTVGPAVNNVQIRIAD-----------DGEILMKGPNIMKGYWQDEDATREVI-KD 442
Query: 352 GWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLI 411
GW +GDIG I G L + R K IV S G+N+ P +E S +
Sbjct: 443 GWFYSGDIGEIDRD----------GYLKITDRKKHIIVTSGGKNIAPQPIENLISESPYV 492
Query: 412 RQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSK 471
Q++VIG+ + A+IVPD +++ AK SI L + K I +Y +L + S+
Sbjct: 493 DQVIVIGEKRPFLIALIVPDFSKLMEYAKENSISATTNKALIENKNIQQIYEKLMRTISR 552
Query: 472 ---CSFQIGPIHVVDEPFTV 488
++ +VDE F++
Sbjct: 553 QLATHEKVRKFLLVDEAFSI 572
>gi|108804880|ref|YP_644817.1| AMP-dependent synthetase and ligase [Rubrobacter xylanophilus DSM
9941]
gi|108766123|gb|ABG05005.1| AMP-dependent synthetase and ligase [Rubrobacter xylanophilus DSM
9941]
Length = 592
Score = 201 bits (511), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 129/382 (33%), Positives = 202/382 (52%), Gaps = 48/382 (12%)
Query: 53 YETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHV 112
+ ++G +D+AT +YTSGTTG PKG +LTH N+L + + D + D FLS LP HV
Sbjct: 171 WRSLGREDVATIIYTSGTTGRPKGAVLTHGNILSNLEGIQDALTVYPEDVFLSFLPLSHV 230
Query: 113 YERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSS 170
+ER CG F+ G + Y +V + ++L+ +P M SVP +YE ++ ++ + S
Sbjct: 231 FERTCGQFLALGVGASVYYAESVEKVPENLREVRPTVMPSVPRLYEKMHDRVRAMVAGGS 290
Query: 171 AARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHL 230
+R + A A +R YE L R + L R A+
Sbjct: 291 PVKRWL------FGRAVAAGRRRYE--VLDRGGRP---------GLPLRAALAVY----- 328
Query: 231 LAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARR 289
++LV+++++ A+G + VSGG L + F+ A G+K+ GYGLTE+SPVIA R
Sbjct: 329 --DRLVFRRLREAVGGRVRFFVSGGAKLDTEVGKFFYAAGIKIMEGYGLTETSPVIACNR 386
Query: 290 PTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALD 349
G+VG P+++ E++I +G ++VRG VM+GYF++ +T++A
Sbjct: 387 LEKPRFGTVGLPLSNLEVRI-----------SPEGEIQVRGPSVMRGYFRDERSTEEAFT 435
Query: 350 EDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSS 409
+DG+ TGDIG G L + R K IVLSTG+NV P +E A + +
Sbjct: 436 QDGFFRTGDIGSFDED----------GYLTVTDRLKSLIVLSTGKNVAPQPIESALVTAP 485
Query: 410 LIRQIVVIGQDQRRPGAIIVPD 431
I Q VV+G+ ++ A++VPD
Sbjct: 486 HISQAVVVGEGRKYVSALVVPD 507
>gi|82701230|ref|YP_410796.1| AMP-dependent synthetase and ligase [Nitrosospira multiformis ATCC
25196]
gi|82409295|gb|ABB73404.1| AMP-dependent synthetase and ligase [Nitrosospira multiformis ATCC
25196]
Length = 663
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 127/363 (34%), Positives = 189/363 (52%), Gaps = 51/363 (14%)
Query: 61 IATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF 120
+AT +YTSGT+G+PKGVML+H N+L S +VP E D LS LP H +ER GY+
Sbjct: 247 LATIIYTSGTSGHPKGVMLSHHNILTNAHSCLQVVPIEESDVLLSFLPLSHTFERTAGYY 306
Query: 121 I-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSS-AARRVVA 177
+ RG + Y ++ L++DL +P ++SVP +YE +Y+GI+ ++ +RR+
Sbjct: 307 VPMMRGSTVAYARSIPQLQEDLLIIRPTILVSVPRIYERVYAGIRAKLAEGPLLSRRLFD 366
Query: 178 RALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVY 237
A + Y F+ + R +K S+ LWP L E LV
Sbjct: 367 LA---VEIGYNRFE-----YQQGRAEKHFSH---------------ALWP---LLEILVA 400
Query: 238 KKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLG 296
KK+ S +G +A +SGG +L + + +G+ + GYG+TESSPV+ NV
Sbjct: 401 KKVMSKLGGRLRAAMSGGAALSSEVSRIFIGLGLPILQGYGMTESSPVVCCNTIEDNVPA 460
Query: 297 SVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNT 356
SVG PI E+K+ G + + +RG VM GY+ N AT+ + DGWLN+
Sbjct: 461 SVGRPIPGVEVKL-----------GEQNALLIRGPNVMLGYWNNEEATRAVMTPDGWLNS 509
Query: 357 GDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVV 416
GDI I G + + GR K+ IV+STGE + P +E A LR L Q++V
Sbjct: 510 GDIAEIDE----------AGHIAITGRVKEIIVMSTGEKIPPANMEAAILRDPLFEQVMV 559
Query: 417 IGQ 419
+G+
Sbjct: 560 VGE 562
>gi|332528557|ref|ZP_08404545.1| AMP-dependent synthetase and ligase [Hylemonella gracilis ATCC
19624]
gi|332042068|gb|EGI78406.1| AMP-dependent synthetase and ligase [Hylemonella gracilis ATCC
19624]
Length = 638
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 144/452 (31%), Positives = 234/452 (51%), Gaps = 40/452 (8%)
Query: 43 DSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDK 102
D++ + GSDD+A VYTSGTTG PKGVMLTH+N+L +++LY V D
Sbjct: 192 DASHGTESMSRTAPGSDDLAAIVYTSGTTGKPKGVMLTHRNVLANVKALYPFVTPLPDDV 251
Query: 103 FLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYS 160
FLS LP H +ER GY++ + G ++Y +V+ L +D++R +P +ISVP +YE +++
Sbjct: 252 FLSFLPLSHTFERTTGYYLPIASGSAVVYARSVQQLAEDMKRVRPTVLISVPRIYERVHA 311
Query: 161 GIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARI 220
+Q+ + S+ +R+ A + ++R L + + A WL R+
Sbjct: 312 RLQEVLAKSAFKQRLFEAAQAK------GWQRFRAAHGLKAAPGEDAAQAAKAGWL--RV 363
Query: 221 ICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLT 279
+ P LL +LV + + + G + VSGG L + +G+ + GYG+T
Sbjct: 364 L-----PWALL-RRLVAQPLMAQFGGRIRIAVSGGAPLAQAQARCFLGLGLPLLQGYGMT 417
Query: 280 ESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFK 339
E+SPV+AA RP N +VG + +++I G+ ++VRG+ VM+GY+
Sbjct: 418 ETSPVVAANRPDDNDPATVGRALPGVQVRI-----------GANRELQVRGASVMRGYWN 466
Query: 340 NPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPL 399
P T + LD +GWL+TGD I ++GR R + GR K+ IV STGE V P
Sbjct: 467 RPEDTARVLDAEGWLSTGDQAEI---DAQGRIR-------ILGRIKEIIVTSTGEKVPPG 516
Query: 400 ELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTIS 459
+LE+A L + L Q+ V+G+ + A+ V +E + AKRL + D L+ I+
Sbjct: 517 DLEQAILDAPLFEQVFVVGEQRPFIAAVAVVQADEWIKLAKRLGVDPRDDGSLAHPDVIA 576
Query: 460 LLYGELRKWTSKCSFQIGP--IHVVDEPFTVN 489
++ + T + P + + EP+ +
Sbjct: 577 AALKQMERVTGSFARYAVPRAVTLTREPWNIE 608
>gi|408672874|ref|YP_006872622.1| AMP-dependent synthetase and ligase [Emticicia oligotrophica DSM
17448]
gi|387854498|gb|AFK02595.1| AMP-dependent synthetase and ligase [Emticicia oligotrophica DSM
17448]
Length = 588
Score = 199 bits (505), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 150/493 (30%), Positives = 235/493 (47%), Gaps = 62/493 (12%)
Query: 7 LWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIG----SDDIA 62
L K + A D ++ +D+II G + K S+S K E+I +DD+
Sbjct: 118 LLKKAQTAAKDAPSVQEIYCFDKII--GSKHWKEVSESAKNEDVEKLESIKQSIKTDDLL 175
Query: 63 TYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIF 122
T +YTSGTTGNPKGVML+H NL+ S D P + + LS LP HVYER Y
Sbjct: 176 TIIYTSGTTGNPKGVMLSHLNLISNFESCRDNFPIDETCRALSFLPLNHVYERMVLYLYM 235
Query: 123 SRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALI 181
S+G+ + Y + + DDL+ +P +VP + E +Y I + + S +R + +
Sbjct: 236 SKGMSIYYAQNMATIADDLRDVKPQIFTTVPRLLEKVYDKIVAKGYELSGLKRKIFLWAL 295
Query: 182 RISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQ 241
+ Y NQ+ ++ + W A+KLV+ K Q
Sbjct: 296 DLGLKYDP------------NQQFSAWYNFQLKW----------------AQKLVFSKWQ 327
Query: 242 SAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARR--PTCNVLGSV 298
A+G + + SG +L + + A G+ V GYG+TE+SPVIA R P + +V
Sbjct: 328 EALGGNIRMICSGAAALQPRLARVFWAAGIPVSEGYGMTETSPVIATNRVMPLDLRISTV 387
Query: 299 GHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGD 358
G I+ T +KI AE E+L V+G VM GY+ P TK+ +D DGWL+TGD
Sbjct: 388 GPIIDGTTVKI--AEDGEIL---------VKGPNVMLGYYNKPELTKEVIDADGWLHTGD 436
Query: 359 IGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIG 418
IG + G L + R K+ S G+ V P LE S I Q++V+G
Sbjct: 437 IGKLDE----------GKYLKITDRKKEIFKTSGGKYVAPQVLENKMKESVFIEQMMVVG 486
Query: 419 QDQRRPGAIIVPDKEEVLMAAKRLSIVH-ADASELSKEKTISLLYGELRKWTSKCSF--Q 475
+ Q+ P A+I+P+ + K I + DA + ++ + L++ E+ K+ + + Q
Sbjct: 487 ESQKFPAALIIPEFVALRDWCKTQGIDYTTDAEIIKNQQVLKLIFSEISKFNKEFAQYEQ 546
Query: 476 IGPIHVVDEPFTV 488
+ ++ P+T+
Sbjct: 547 VKKFTLLANPWTI 559
>gi|385809651|ref|YP_005846047.1| Long-chain acyl-CoA synthetase [Ignavibacterium album JCM 16511]
gi|383801699|gb|AFH48779.1| Long-chain acyl-CoA synthetase [Ignavibacterium album JCM 16511]
Length = 611
Score = 198 bits (504), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 149/492 (30%), Positives = 234/492 (47%), Gaps = 63/492 (12%)
Query: 4 IILLWGKKSSVAPDIVEEIP-VFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIA 62
I+++ +K D IP ++++ ++ D+G K +S + E +D+
Sbjct: 140 FIIIYNEK-----DFDPNIPGLYTFKQVQDIG----KRYSKEHPNLLKDSIEMTKPEDVC 190
Query: 63 TYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFI- 121
T +YTSGTTG PKGV+LTH N+L +R+ + P D FLS LP H++ER GY+
Sbjct: 191 TIIYTSGTTGEPKGVVLTHNNILSNVRAALECFPINKDDIFLSFLPLCHIFERMAGYYTA 250
Query: 122 FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARAL 180
F+ G + Y ++ + DL +P M +VP ++E +YS I K + + ++ +
Sbjct: 251 FASGGTICYAESIETVAQDLIAVKPTIMTTVPRLFERIYSRIIKNVESQPEKKQKIFHWA 310
Query: 181 IRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKI 240
I Y + K+ + L H +A+KLV+KK+
Sbjct: 311 IETGKEYASAKK-------------------------KGKVSIPLAAKHKVADKLVFKKL 345
Query: 241 QSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVG 299
+ G + +SGG +L + F+EA+G+ + GYGLTESSPVIAA R G+VG
Sbjct: 346 RERTGGRLRFFISGGAALSKDLGEFFEAVGILIIEGYGLTESSPVIAANRVDDYKFGTVG 405
Query: 300 HPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDI 359
P E+KI A E+L +G +MQGY+KN T +A DGWL+TGDI
Sbjct: 406 KPFPGVEVKI--APDGEIL---------AKGPNIMQGYYKNKKET-EATIVDGWLHTGDI 453
Query: 360 GWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQ 419
G G L + R K S G+ + P +E L S I Q V+IG
Sbjct: 454 GEFDAE----------GFLKITDRKKHLFKTSAGKYIAPTPIENLFLASKYIDQFVLIGD 503
Query: 420 DQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTI-SLLYGELRKWTSKCSF--QI 476
+ A+IVPD E + A I + +L ++ I LL EL + + + ++
Sbjct: 504 RRMFLTALIVPDFEALKEYADSNKIPYTKVDDLVRDDRIYKLLESELNQMQRQLANYERV 563
Query: 477 GPIHVVDEPFTV 488
++D+PF++
Sbjct: 564 RKFALLDKPFSI 575
>gi|374586879|ref|ZP_09659971.1| AMP-dependent synthetase and ligase [Leptonema illini DSM 21528]
gi|373875740|gb|EHQ07734.1| AMP-dependent synthetase and ligase [Leptonema illini DSM 21528]
Length = 656
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 143/452 (31%), Positives = 225/452 (49%), Gaps = 37/452 (8%)
Query: 11 KSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGT 70
K S APD+ V + D+ L R+ + F RK + I DD+AT +YTSGT
Sbjct: 160 KHSKAPDVKLHFLVDALDKGHALIRKHGEEF-----LRK--RGLAIRPDDLATIIYTSGT 212
Query: 71 TGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMY 130
TG PKGVMLTH+N ++ + P D+ + LPPWH+ ER + + G +
Sbjct: 213 TGTPKGVMLTHRNFCWEVAQVQLSTPLNEKDRAVIFLPPWHIAERVLELTLIACGASMAN 272
Query: 131 TAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRIS-FAYTA 189
+++ +L DLQ +P ++SVP V+E LY I + ++ + + ++ A
Sbjct: 273 SSILHLAGDLQTIRPTLLVSVPRVWEQLYKRIMDGVRKQPEEKQKIFHMAVNVAGLHMDA 332
Query: 190 FKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAIL----WPLHLLAEKLVYKKIQSAIG 245
+++ L ++ P+ W+ I A+L W L+L A+ +V KK++ G
Sbjct: 333 LDNLFDRIALI-EEETPAQ-----TWIRKGISVAVLLVTFW-LNLPAQ-IVLKKVKDIFG 384
Query: 246 IS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINH 304
+SG G+LP HI F+ ++ + + YG+TE++ V R VG P+
Sbjct: 385 GRLNYAISGAGALPGHIADFFRSVYIPIVDAYGMTETTAVSVMGRLPWPRRACVGPPLPG 444
Query: 305 TEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDI-GWIA 363
I++ D + G +G+ +G +M+GY++ T + L +DGWLN+GD+ W
Sbjct: 445 VHIQLRDEYGRIITRPGERGVAWHKGPHIMKGYYRAQDKTDEVL-QDGWLNSGDLFAWTT 503
Query: 364 PHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRR 423
G + GRAKDTIVL+ GENVEP +E S I Q+VV+GQD++
Sbjct: 504 T-----------GEIRFTGRAKDTIVLAGGENVEPGPIELRLAASPYIAQVVVVGQDRKS 552
Query: 424 PGAIIVPDKEEVLMAAKRLSIVHADASELSKE 455
A+IVP K+ V A+ L+ V A E E
Sbjct: 553 LAALIVPHKDRV---AEELTKVGHTAPEAMTE 581
>gi|374852591|dbj|BAL55521.1| long-chain acyl-CoA synthetase [uncultured Acidobacteria bacterium]
Length = 555
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 135/408 (33%), Positives = 206/408 (50%), Gaps = 48/408 (11%)
Query: 60 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGY 119
D+AT +YTSGTTG PKGVMLTH N+ + + ++ + D LS+LP H +ER Y
Sbjct: 136 DLATLLYTSGTTGEPKGVMLTHGNITSNVTAAMRVLGYSSRDVVLSILPLSHSFERMAFY 195
Query: 120 FIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 178
G+ + Y + + ++L+ +P ++ VP ++E + + +I +S A + R
Sbjct: 196 CYLHAGLSIAYAESFDKVAENLRDIRPTVLVGVPRLFEKM----RARILEASRALPGLKR 251
Query: 179 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 238
L +++ A +R C R +++ L + W H +AE+ V
Sbjct: 252 HL--VAWGLRAGER-----C-ERARRRGDALSPWLRW------------QHAVAERTVLA 291
Query: 239 KIQSAIGISKAG--VSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLG 296
+I+ IG+ +A +SGG +L + F+ +G+++ GYGLTE+SPV+ P N +G
Sbjct: 292 RIREHIGLDRARSLISGGAALSPDVAYFFLGLGLEILQGYGLTETSPVVTVNPPGANKIG 351
Query: 297 SVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNT 356
+VG PI E+KI AE E+L VRG VM GY+ P T A EDGWL T
Sbjct: 352 TVGRPIPGVEVKI--AEDGEIL---------VRGPNVMLGYYNRPEETAAAFTEDGWLRT 400
Query: 357 GDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVV 416
GD+G++ G LV+ R KD + S G+ V P LE + S LI Q VV
Sbjct: 401 GDVGFLD----------ADGYLVITDRKKDLMKTSGGKYVAPQALENRLVASPLIAQAVV 450
Query: 417 IGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGE 464
+G ++ P A+IVP+ E + A I +A +L I LY E
Sbjct: 451 VGDGRKFPAALIVPNFEALRRYAAAQGIPFREAHQLCAHPKIRRLYEE 498
>gi|194336560|ref|YP_002018354.1| AMP-dependent synthetase and ligase [Pelodictyon
phaeoclathratiforme BU-1]
gi|194309037|gb|ACF43737.1| AMP-dependent synthetase and ligase [Pelodictyon
phaeoclathratiforme BU-1]
Length = 610
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 138/416 (33%), Positives = 217/416 (52%), Gaps = 49/416 (11%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 118
DD+AT +YTSGTTG PKGVMLTH+N+ ++S I+ + D LS LP H YER G
Sbjct: 183 DDVATIIYTSGTTGLPKGVMLTHRNICENVKSCSSIMRLDESDCSLSFLPLSHAYERTGG 242
Query: 119 YF-IFSRGIEL-MYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 176
Y+ IFS G + + ++ + ++ +P + +VP +++ + GI KQI + SA
Sbjct: 243 YYLIFSCGAAIYLAESIETISLNMSEARPTIIFTVPRLFDRIKMGILKQISSQSA----- 297
Query: 177 ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLV 236
I+ Y A K E + N+K + +L H LAEKLV
Sbjct: 298 ----IKQKIFYWALK-TGEKYHQEINEKG--------------VAGKLLSAKHALAEKLV 338
Query: 237 YKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVL 295
YKKI++ G + VSGG +LP I F++A+ + + G+GLTE+SPV RP
Sbjct: 339 YKKIKNKFGGRLRYFVSGGAALPQKIGEFFQALDISILEGFGLTETSPVTHVNRPEKIKY 398
Query: 296 GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLN 355
G+VG + + ++ I AE E+L ++G +M+GY+ + +AT++ + DGW +
Sbjct: 399 GTVGPAVENVQVMI--AEDGEIL---------LKGPNIMKGYWNDEAATREVI-RDGWFH 446
Query: 356 TGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIV 415
TGDIG I G L + R K IV S G+N+ P+ +E SS + Q++
Sbjct: 447 TGDIGVIDRD----------GYLKITDRKKHIIVTSGGKNIAPMPIENLISDSSYVDQVI 496
Query: 416 VIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSK 471
VIG+ + A+IVP+ ++ A I A EL + K++ ++ +L + S+
Sbjct: 497 VIGEKRPFLIALIVPEFNKLKEFAAAEGIQAASNKELIENKSVQQIFEKLLRTVSR 552
>gi|378824089|ref|ZP_09846634.1| AMP-binding enzyme [Sutterella parvirubra YIT 11816]
gi|378597083|gb|EHY30426.1| AMP-binding enzyme [Sutterella parvirubra YIT 11816]
Length = 608
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 140/436 (32%), Positives = 213/436 (48%), Gaps = 46/436 (10%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 118
+D+A VYTSGTTG PKGVMLTH N + ++ + V G+ FLS LP H +ER G
Sbjct: 183 EDLAGIVYTSGTTGRPKGVMLTHANFVANVKDTLECVSPRAGEVFLSFLPLSHTFERMAG 242
Query: 119 YFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSS-AARRV 175
Y++ + G + Y +V L +DL+ +P +ISVP VYE +++ +Q+++ SS +ARR+
Sbjct: 243 YYLALATGCTIAYNRSVLLLAEDLKTIRPQVIISVPRVYERIHARVQEKLKKSSPSARRL 302
Query: 176 VARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKL 235
A +R+ +A FC +N +P A W +I A L P ++
Sbjct: 303 FGEA-VRVGWA---------DFC-EKNGIRPE---ADAHRWWDGLIRAFLLP------RV 342
Query: 236 VYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVL 295
Q G + +SGG ++ + + +G+ + GYG+TE+SP+IA N
Sbjct: 343 RETLAQQFGGRLRVAISGGAAVNPKVARTFCGLGLPIIQGYGMTETSPIIAGNNLELNHP 402
Query: 296 GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLN 355
+VGHP H E+++ G ++VRG VM+GY+ P T A DGWL
Sbjct: 403 DTVGHPFQHVEVRL-----------GEGDEIEVRGPSVMKGYWGRPEDTAAAFTPDGWLK 451
Query: 356 TGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIV 415
TGDIG P G+L ++GR K+ IV STGE + P +LE A L Q
Sbjct: 452 TGDIGEWTPE----------GMLRIKGRIKEIIVTSTGEKIPPADLESAIETDPLFAQTW 501
Query: 416 VIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSKCSFQ 475
V+G+++ G + V +K E + D + LS + S + +
Sbjct: 502 VVGENRPYLGLVCVLEKNEWAALCAEEGLDPEDPASLSAARAKSSVLKRAKTAAGDFPHY 561
Query: 476 IGPIHVV--DEPFTVN 489
P VV EP+T+
Sbjct: 562 ALPRAVVLTQEPWTIE 577
>gi|345302941|ref|YP_004824843.1| Long-chain-fatty-acid--CoA ligase [Rhodothermus marinus
SG0.5JP17-172]
gi|345112174|gb|AEN73006.1| Long-chain-fatty-acid--CoA ligase [Rhodothermus marinus
SG0.5JP17-172]
Length = 632
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 141/439 (32%), Positives = 220/439 (50%), Gaps = 62/439 (14%)
Query: 1 MRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDD 60
+RF+++ + + D VE P++++ ++++ GR+ R A ++ AR + I D
Sbjct: 146 VRFVVV--ADATGLDTDRVEGRPLYTFAQLLEAGRQRRAADPEAI-ARLRAQ---IRPGD 199
Query: 61 IATYVYTSGTTGNPKGVMLTHKNL----LHQIRSLYDIVPAENGDKFLSMLPPWHVYERA 116
+AT +YTSGTTG PKGVML+H+N+ L + P +G+ LS LP HV+ R
Sbjct: 200 LATIIYTSGTTGRPKGVMLSHENISFNALTSFSGIKQYRPGPDGEVALSFLPLTHVFART 259
Query: 117 CGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 176
Y + +T L+D L++ +P +VP V E +Y + ++ T + +
Sbjct: 260 LFYGYLYYATSVYFTTPDALRDALRQVRPTTFATVPRVLEKIYGALVERAATMPGLKGRI 319
Query: 177 ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHL-LAEKL 235
R + ++ R YE L R + L+ L L +A++L
Sbjct: 320 FRWALDLA-------RRYE---LGREPRG-------------------LYRLQLAVADRL 350
Query: 236 VYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNV 294
VY+K + A+G A + +GG +L + + A G+ + GYGLTE+SPVI RP N
Sbjct: 351 VYRKWREALGGRIAFIIAGGAALSAELANIFAAAGIPILQGYGLTETSPVITYNRPELNR 410
Query: 295 LGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWL 354
G+VG PI E+KI AE E+L RG VM GY+K+P T++ +DE+GW
Sbjct: 411 AGTVGVPIPGVEVKI--AEDGEIL---------TRGPHVMLGYYKDPERTREVIDEEGWF 459
Query: 355 NTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQI 414
+TGDIG+ G LV+ R KD LSTG+ V P LE+ L+ Q
Sbjct: 460 HTGDIGYFTEE----------GFLVITDRKKDLFKLSTGKYVMPQPLEQRLTADPLVEQA 509
Query: 415 VVIGQDQRRPGAIIVPDKE 433
+V+G + A+I PD+E
Sbjct: 510 LVVGPGYKFTAALIFPDEE 528
>gi|89075579|ref|ZP_01161984.1| putative long-chain-fatty-acid-CoA ligase [Photobacterium sp.
SKA34]
gi|89048719|gb|EAR54291.1| putative long-chain-fatty-acid-CoA ligase [Photobacterium sp.
SKA34]
Length = 607
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 132/402 (32%), Positives = 203/402 (50%), Gaps = 47/402 (11%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 118
DD+ T +YTSGTTG PKGVML + N+ QI + + + GD L LP HV+ERA
Sbjct: 178 DDLVTLIYTSGTTGTPKGVMLDYANIASQIEAHDQRLALDEGDTSLCFLPLSHVFERAWT 237
Query: 119 YFIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 177
++ RG+ Y + N LK+ L +PHYM +VP V+E +YSGI ++ + R+++
Sbjct: 238 FYALHRGVVNCYLSDTNKLKEALITVKPHYMSAVPRVFEKIYSGIHDKVSRAPLHRKMIF 297
Query: 178 RALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVY 237
+ + A + + ++PS+L L ++LAEK+V
Sbjct: 298 TWAVNMGAKMAAAR---------QECREPSWL---------------LKKSYVLAEKVVL 333
Query: 238 KKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLG 296
K+Q+ +G + K GG L I F+ AIG+ V++GYG+TE++ ++ +C
Sbjct: 334 SKLQAVLGGNIKFMPCGGAKLDAGIGRFFHAIGINVKLGYGMTETTATVSCWDDSCYNPD 393
Query: 297 SVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNT 356
S+G P+ E+KI E NE+L VRG VM+GY+ P T + EDG+L T
Sbjct: 394 SIGMPMPGAEVKI--GEQNEIL---------VRGPMVMRGYYNMPEETAKNFTEDGFLKT 442
Query: 357 GDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVV 416
GD G++ G L + R K+ + S G+ + P +E A + I QI V
Sbjct: 443 GDAGYLDEQ----------GNLFITDRIKELMKTSGGKYIAPQVIEGAIGKDHFIEQIAV 492
Query: 417 IGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTI 458
I ++ A+IVP E + A+ L+I + D EL K I
Sbjct: 493 IADTRKFVSALIVPCFETLEEHARELNIKYKDRLELVKHSQI 534
>gi|373459375|ref|ZP_09551142.1| AMP-dependent synthetase and ligase [Caldithrix abyssi DSM 13497]
gi|371721039|gb|EHO42810.1| AMP-dependent synthetase and ligase [Caldithrix abyssi DSM 13497]
Length = 597
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 143/426 (33%), Positives = 212/426 (49%), Gaps = 57/426 (13%)
Query: 15 APDIVEEIPVFSYDEIIDLGRE--SRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTG 72
AP+ +EE P + ++G E +K +++ +K + DD AT +YTSGTTG
Sbjct: 138 APEKLEE-PWKKLSALAEMGEEFLQKKPTHIADEIKK------VKRDDWATIIYTSGTTG 190
Query: 73 NPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFS-RGIELMYT 131
PKG +LTH N L I + +V D FLS LP H++ER G+F+ + +G + Y
Sbjct: 191 EPKGAVLTHGNFLSNIEGILGVVDLYAEDIFLSFLPLSHIFERLAGHFLSNHQGSTVAYA 250
Query: 132 -AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAF 190
++ + D++Q +P M+SVP +YE +Y+ + + + +R +I +
Sbjct: 251 ESIDTVADNMQEIKPTVMVSVPRLYEKIYARVLENVEMGPPLKR-------KIFYWALGV 303
Query: 191 KRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KA 249
R Y + + N+K +L L + LA KLV+ K+Q +G +
Sbjct: 304 GREYVNYVM--NKKPLPFL---------------LKKKYNLANKLVFHKLQERVGGRIRF 346
Query: 250 GVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKI 309
VSGG L I F+ A G+ + GYGLTE+SPVI P G VG P+ + E+KI
Sbjct: 347 FVSGGAPLSAEIAEFFTAAGLIILEGYGLTETSPVITVNLPDNFKFGYVGPPLPNVEVKI 406
Query: 310 VDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRG 369
E E+L RG VM GYFK ATK+ +D++GW +TGDIG I
Sbjct: 407 --DEDGEIL---------TRGPHVMVGYFKKEDATKEVIDDEGWFHTGDIGLIDED---- 451
Query: 370 RSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIV 429
G L + R K+ IV S G+N+ P +E + + I Q VVIG ++ AIIV
Sbjct: 452 ------GFLKITDRKKNIIVTSGGKNIAPQPIENMLVTTQYIEQAVVIGDKRKFCTAIIV 505
Query: 430 PDKEEV 435
P E V
Sbjct: 506 PAFEAV 511
>gi|320353996|ref|YP_004195335.1| AMP-dependent synthetase and ligase [Desulfobulbus propionicus DSM
2032]
gi|320122498|gb|ADW18044.1| AMP-dependent synthetase and ligase [Desulfobulbus propionicus DSM
2032]
Length = 634
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 136/440 (30%), Positives = 228/440 (51%), Gaps = 53/440 (12%)
Query: 56 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYER 115
+ S+D+AT +YTSGTTG PKGVML+H+N+L ++ + PA D FLS LP H +ER
Sbjct: 191 LQSNDLATIIYTSGTTGRPKGVMLSHRNILWNCWAVLQVHPARPDDLFLSFLPLSHSFER 250
Query: 116 ACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 173
GY++ G + Y +++ L +D++ +P +ISVP +YE + + I++Q+
Sbjct: 251 TVGYYVPMMAGCCIAYCRSLQELAEDMRLIRPTILISVPRIYERIAARIEEQLERKGRLA 310
Query: 174 RVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAE 233
R + A + + F R +E R+Q+ P+ LI WP LL +
Sbjct: 311 RWLFAAAVTVGF------RCFEA---QRDQRTPTLRDRLI------------WP--LLRQ 347
Query: 234 KLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCN 293
+ ++ G + V+GG + I + IG+ + GYGLTE++PV++ P N
Sbjct: 348 LVAIPMLERFGGRVRLAVTGGAPVQEGISRLFLGIGLPLVQGYGLTEAAPVVSTNEPANN 407
Query: 294 VLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGW 353
+VG P+ E+++ AE +E+L VRG VM GY++ P T + LD DGW
Sbjct: 408 RPTTVGPPLPGIEVRL--AEDHELL---------VRGPGVMLGYWQQPELTAEVLDADGW 456
Query: 354 LNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQ 413
L TGDI +R G + + GR+K+ +V STGE V P+ +E A + LI Q
Sbjct: 457 LKTGDI-----------ARIDHGFIRIIGRSKEILVTSTGEKVAPVAMEMALEQHPLIDQ 505
Query: 414 IVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASEL----SKEKTISLLYGELRKWT 469
+V+G+ + A++V + + + A L + D + L ++ +S + G LR +
Sbjct: 506 AMVVGEGRPHVAALLVVNPQAWMRLAAHLGLDADDPASLDSDAARAAALSTVSGLLRAFP 565
Query: 470 SKCSFQIGPIHVVDEPFTVN 489
+ Q+ + ++ E +T++
Sbjct: 566 APA--QVRGVCLLSEEWTID 583
>gi|90580779|ref|ZP_01236582.1| putative long-chain-fatty-acid-CoAligase [Photobacterium angustum
S14]
gi|90438047|gb|EAS63235.1| putative long-chain-fatty-acid-CoAligase [Vibrio angustum S14]
Length = 607
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 132/402 (32%), Positives = 202/402 (50%), Gaps = 47/402 (11%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 118
DD+ T +YTSGTTG PKGVML + N+ QI + + + GD L LP HV+ERA
Sbjct: 178 DDLVTLIYTSGTTGTPKGVMLDYANIASQIEAHDQRLALDEGDTSLCFLPLSHVFERAWT 237
Query: 119 YFIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 177
++ RG+ Y + N LK+ L +PHYM +VP V+E +YSGI ++ + R+++
Sbjct: 238 FYALHRGVVNCYLSDTNKLKEALITVKPHYMSAVPRVFEKIYSGIHDKVSRAPLHRKMIF 297
Query: 178 RALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVY 237
+ + A + + ++PS+L L + LAEK+V
Sbjct: 298 TWAVNMGAKMAAAR---------QECREPSWL---------------LKKSYALAEKVVL 333
Query: 238 KKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLG 296
K+Q+ +G + K GG L I F+ AIG+ V++GYG+TE++ ++ +C
Sbjct: 334 SKLQAVLGGNIKFMPCGGAKLDAGIGRFFHAIGINVKLGYGMTETTATVSCWDDSCYNPD 393
Query: 297 SVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNT 356
S+G P+ E+KI E NE+L VRG VM+GY+ P T + EDG+L T
Sbjct: 394 SIGMPMPGAEVKI--GEQNEIL---------VRGPMVMRGYYNMPEETAKNFTEDGFLKT 442
Query: 357 GDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVV 416
GD G++ G L + R K+ + S G+ + P +E A + I QI V
Sbjct: 443 GDAGYLDEQ----------GNLFITDRIKELMKTSGGKYIAPQVIEGAIGKDHFIEQIAV 492
Query: 417 IGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTI 458
I ++ A+IVP E + A+ L+I + D EL K I
Sbjct: 493 IADTRKFVSALIVPCFETLEEHARELNIKYKDRLELVKHSQI 534
>gi|345304087|ref|YP_004825989.1| Long-chain-fatty-acid--CoA ligase [Rhodothermus marinus
SG0.5JP17-172]
gi|345113320|gb|AEN74152.1| Long-chain-fatty-acid--CoA ligase [Rhodothermus marinus
SG0.5JP17-172]
Length = 633
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 145/483 (30%), Positives = 235/483 (48%), Gaps = 56/483 (11%)
Query: 24 VFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKN 83
V ++D+++ G A+ ++A E + DD++ +YTSGTTG PKGVMLTH+N
Sbjct: 155 VRAWDDVLAEG----AAYWAEHEAELSKLAEQVQPDDLSALIYTSGTTGLPKGVMLTHRN 210
Query: 84 LLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF-IFSRGIELMYT-AVRNLKDDLQ 141
+++ V D LS LP H +ER GY + + G + Y ++ L +L
Sbjct: 211 FCANVQAALQRVDFGPADHHLSFLPLCHSFERTAGYTAVLACGARISYAESIEALSQNLL 270
Query: 142 RYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTR 201
+P MISVP ++E +Y+ I K + S + ++ + + + A +
Sbjct: 271 EVRPTVMISVPRLFERVYNAIHKSVEKSPSLQQKIFHWAVGVGRRMAACR---------- 320
Query: 202 NQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMH 260
L R +L H LA +LV++K+ +G + + VSGG +LP H
Sbjct: 321 --------------LEGRTPGPVLQLQHRLAHRLVFQKLHDRLGGNLRFAVSGGAALPRH 366
Query: 261 IDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPI--------NHTEIKIVDA 312
I F+ AIG+ + GYGLTE++PV+ P G+VG + T+ KIV
Sbjct: 367 IGEFFLAIGLTIIEGYGLTETAPVLTVNPPDRPRFGTVGWVLPGVTIAIQRLTDGKIVGQ 426
Query: 313 ETNEVLPAG---SKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRG 369
+ + P+ +G + V+G VM+GY+ N AT++ D DGW +TGD+G
Sbjct: 427 LSGDDYPSDLTTEEGEILVKGPNVMKGYWNNEEATREVFDADGWFHTGDVG--------- 477
Query: 370 RSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIV 429
R G LV+ R K IV G+N+ P +E+ + I QIVVIG+ + A+IV
Sbjct: 478 --RFDQGYLVITDRIKHMIVSRGGKNIYPGPIEDQLKQEPWIDQIVVIGEGREFLTALIV 535
Query: 430 PDKEEVLMAAKRLSIVHA-DASELSKEKTISLLYGELRKWT--SKCSFQIGPIHVVDEPF 486
PD E + A+ ++ A D + L+ + +L LR++ + +I ++ EPF
Sbjct: 536 PDFEALRQYAQEHNLQAASDEALLALPEIRALFEQSLRRYNRHAPAHERIRAFRLLSEPF 595
Query: 487 TVN 489
T+
Sbjct: 596 TIE 598
>gi|330448784|ref|ZP_08312431.1| AMP-binding enzyme family protein [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328492975|dbj|GAA06928.1| AMP-binding enzyme family protein [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 607
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 135/403 (33%), Positives = 202/403 (50%), Gaps = 49/403 (12%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 118
DD+ T +YTSGTTG PKGVML + N+ QI + + + G L LP HV+ERA
Sbjct: 178 DDLITLIYTSGTTGTPKGVMLDYANIASQIEAHDQRLALDEGGTSLCFLPLSHVFERAWT 237
Query: 119 YFIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 177
+++ RG+ Y + N LK+ L +PHYM +VP V+E +YSGI + V+
Sbjct: 238 FYVLHRGVVNCYLSDTNKLKEALVTVKPHYMSAVPRVFEKIYSGIHDK----------VS 287
Query: 178 RALIRISFAYTAFKRIYEGFCLTRNQ-KQPSYLVALIDWLWARIICAILWPLHLLAEKLV 236
RA + +T + + R + ++PS+L L H LAEK+V
Sbjct: 288 RAQLHRKMIFTWAVNMGAKMSVARQECREPSWL---------------LKKSHALAEKVV 332
Query: 237 YKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVL 295
K+Q+ +G + K GG L I F+ AIG+ V++GYG+TE++ ++ +C
Sbjct: 333 LSKLQAVLGGNIKFMPCGGAKLDAGIGRFFHAIGINVKLGYGMTETTATVSCWDDSCYNP 392
Query: 296 GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLN 355
S+G P+ E+KI + NE+L VRG VM+GY+ P T + EDG+L
Sbjct: 393 DSIGMPMPGAEVKI--GQENEIL---------VRGPMVMRGYYNMPEETAKNFTEDGFLK 441
Query: 356 TGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIV 415
TGD G+I G L + R K+ + S G+ + P +E A + I QI
Sbjct: 442 TGDAGYIDEQ----------GNLFITDRIKELMKTSGGKYIAPQVIEGAIGKDHFIEQIA 491
Query: 416 VIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTI 458
VI ++ A+IVP E + A+ L+I + D EL K I
Sbjct: 492 VIADTRKFVSALIVPCFETLEEHARELNIKYKDRLELIKHSQI 534
>gi|268316194|ref|YP_003289913.1| AMP-dependent synthetase and ligase [Rhodothermus marinus DSM 4252]
gi|262333728|gb|ACY47525.1| AMP-dependent synthetase and ligase [Rhodothermus marinus DSM 4252]
Length = 633
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 145/483 (30%), Positives = 235/483 (48%), Gaps = 56/483 (11%)
Query: 24 VFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKN 83
V ++D+++ G A+ ++A E + DD++ +YTSGTTG PKGVMLTH+N
Sbjct: 155 VRAWDDVMAEG----AAYWAEHEAELSKLAEQVQPDDLSALIYTSGTTGLPKGVMLTHRN 210
Query: 84 LLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF-IFSRGIELMYT-AVRNLKDDLQ 141
+++ V D LS LP H +ER GY + + G + Y ++ L +L
Sbjct: 211 FCSNVQAALQRVDFGPADHHLSFLPLCHSFERTAGYTAVLACGARISYAESIEALSQNLL 270
Query: 142 RYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTR 201
+P MISVP ++E +Y+ I K + S + ++ + + + A +
Sbjct: 271 EVRPTVMISVPRLFERVYNAIHKSVEKSPSLQQKIFHWAVGVGRRMAACR---------- 320
Query: 202 NQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMH 260
L R +L H LA +LV++K+ +G + + VSGG +LP H
Sbjct: 321 --------------LEGRTPGPVLQLQHRLAHRLVFQKLHDRLGGNLRFAVSGGAALPRH 366
Query: 261 IDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPI--------NHTEIKIVDA 312
I F+ AIG+ + GYGLTE++PV+ P G+VG + T+ KIV
Sbjct: 367 IGEFFLAIGLTIIEGYGLTETAPVLTVNPPDRPRFGTVGWVLPGVTIAIQRLTDGKIVGQ 426
Query: 313 ETNEVLPAG---SKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRG 369
+ + P+ +G + V+G VM+GY+ N AT++ D DGW +TGD+G
Sbjct: 427 LSGDDYPSDLTTEEGEILVKGPNVMKGYWNNEEATREVFDADGWFHTGDVG--------- 477
Query: 370 RSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIV 429
R G LV+ R K IV G+N+ P +E+ + I QIVVIG+ + A+IV
Sbjct: 478 --RFDRGYLVITDRIKHMIVSRGGKNIYPGPIEDQLKQEPWIDQIVVIGEGREFLTALIV 535
Query: 430 PDKEEVLMAAKRLSIVHA-DASELSKEKTISLLYGELRKWT--SKCSFQIGPIHVVDEPF 486
PD E + A+ ++ A D + L+ + +L LR++ + +I ++ EPF
Sbjct: 536 PDFEALRQYAQEHNLQAASDEALLALPEIRALFEQSLRRYNRHAPAHERIRAFRLLSEPF 595
Query: 487 TVN 489
T+
Sbjct: 596 TIE 598
>gi|300771404|ref|ZP_07081280.1| possible long-chain-fatty-acid--CoA ligase [Sphingobacterium
spiritivorum ATCC 33861]
gi|300762074|gb|EFK58894.1| possible long-chain-fatty-acid--CoA ligase [Sphingobacterium
spiritivorum ATCC 33861]
Length = 591
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 140/441 (31%), Positives = 224/441 (50%), Gaps = 57/441 (12%)
Query: 21 EIPVFSYDEIIDLGR-ESRKAFSDSNDAR-KHYKYETIGSDDIATYVYTSGTTGNPKGVM 78
EI +F++++I DL + AF D K YK + + DD+ T +YTSGTTG PKGV+
Sbjct: 131 EINLFTFEKIDDLPTLDDVIAFGKEQDIDLKPYK-DAVSEDDLLTLIYTSGTTGKPKGVL 189
Query: 79 LTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLK 137
LTHKN++ + + ++ E +K LS LP H++ER Y FSRG+++ Y + N+
Sbjct: 190 LTHKNVMSNVNASNHLLKTEY-NKALSFLPLCHIFERMVVYLYFSRGVQIYYAENLDNIV 248
Query: 138 DDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGF 197
D+ +P +VP V E +Y I ++ +AL I A +
Sbjct: 249 ADINEVKPMAFTTVPRVLEKVYDKIVEK-----------GKALTGIKKAL-----FFWAL 292
Query: 198 CLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGS 256
L ++P A ++ +A KL++ K + A+G K VSGG +
Sbjct: 293 ELGHKYQEPEKNGAFYNFKLG------------IARKLIFSKWKEALGGEIKLIVSGGAA 340
Query: 257 LPMHIDLFYEAIGVKVQVGYGLTESSPVIAAR--RPTCNVLGSVGHPINHTEIKIVDAET 314
L + + A G++V GYGLTE+SPVIA +P G+VG +++ ++KI
Sbjct: 341 LQERLARVFWAAGIQVLEGYGLTETSPVIAVNTWQPNGVRFGTVGKVLSNLDVKI----- 395
Query: 315 NEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRC 374
G G + V+G + GY+KN ATK+A+DE+G+ +TGDIG ++
Sbjct: 396 ------GQDGEILVKGPSITAGYYKNQEATKEAIDEEGYFHTGDIGELSKD--------- 440
Query: 375 GGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEE 434
G L + R K+ + G+ V P LE + S+LI Q++V+G++++ P A+IVP EE
Sbjct: 441 -GFLKITDRKKEMFKTAGGKYVAPQVLENKFMESTLIGQVMVLGENRKFPSALIVPAFEE 499
Query: 435 VLMAAKRLSIVHADASELSKE 455
+ K I + E+ K+
Sbjct: 500 LEKWCKHKGIAYTSKDEIIKD 520
>gi|291614318|ref|YP_003524475.1| AMP-dependent synthetase and ligase [Sideroxydans lithotrophicus
ES-1]
gi|291584430|gb|ADE12088.1| AMP-dependent synthetase and ligase [Sideroxydans lithotrophicus
ES-1]
Length = 602
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 128/395 (32%), Positives = 197/395 (49%), Gaps = 63/395 (15%)
Query: 60 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGY 119
++A+ +YTSGTTG PKGVML+H N+L D LS LP H +ER CGY
Sbjct: 184 ELASIIYTSGTTGRPKGVMLSHNNMLSNTYDAMATFMVRGDDLLLSFLPLSHTFERTCGY 243
Query: 120 FI---------FSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSS 170
++ ++R I L L +DL+ +P +ISVP +YE +Y I ++
Sbjct: 244 YLQVMTAATVAYARSIPL-------LSEDLKTIKPTILISVPRIYERIYGAISTKLAEGP 296
Query: 171 AARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHL 230
A +R++ + + +A ++ G+ +PS+L LWP
Sbjct: 297 AFKRMLFHLAVEVGWARFLHQQRRGGW-------KPSFL---------------LWP--- 331
Query: 231 LAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARR 289
L +KLV +KI +G + VSGG +L I + +G+ V GYGLTE+SP+++ +
Sbjct: 332 LLDKLVAQKILERLGGRLRTTVSGGAALAPEISRVFVGLGLPVVQGYGLTETSPIVSGNK 391
Query: 290 PTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALD 349
N SVG PI ++K+ G + + V+G VM GY+ NP AT+ +D
Sbjct: 392 LDNNFPDSVGQPIRGVQVKL-----------GEQHALLVKGPNVMMGYWNNPEATRAMID 440
Query: 350 EDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSS 409
DGWLNTGDI I+ G + + GR K+ IVLS GE + P ++E A L
Sbjct: 441 ADGWLNTGDIAHISET----------GHIYITGRLKEIIVLSNGEKMPPADMEAAILHDP 490
Query: 410 LIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI 444
LI Q+++ G+ + A+ V + E L A ++ +
Sbjct: 491 LIDQVMIYGEGRPYLIALAVLNPEVWLQVAAKVGV 525
>gi|227540636|ref|ZP_03970685.1| possible long-chain-fatty-acid--CoA ligase [Sphingobacterium
spiritivorum ATCC 33300]
gi|227239498|gb|EEI89513.1| possible long-chain-fatty-acid--CoA ligase [Sphingobacterium
spiritivorum ATCC 33300]
Length = 591
Score = 195 bits (496), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 144/456 (31%), Positives = 229/456 (50%), Gaps = 59/456 (12%)
Query: 7 LWGKKSSVAPDIVEEIPVFSYDEIIDLGR-ESRKAFSDSNDAR-KHYKYETIGSDDIATY 64
L GK + + EI +F++++I DL + AF D K YK + + DD+ T
Sbjct: 117 LTGKVKTALKENNLEINLFTFEKIDDLPTLDDVIAFGKEQDIDLKPYK-DAVSEDDLLTL 175
Query: 65 VYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSR 124
+YTSGTTG PKGV+LTHKN++ + + ++ E +K LS LP H++ER Y FSR
Sbjct: 176 IYTSGTTGKPKGVLLTHKNVMSNVNASNHLLKTEY-NKALSFLPLCHIFERMVVYLYFSR 234
Query: 125 GIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRI 183
G+++ Y + N+ D+ +P +VP V E +Y I ++ +AL I
Sbjct: 235 GVQIYYAENLDNIVADINEVKPMAFTTVPRVLEKVYDKIVEK-----------GKALTGI 283
Query: 184 SFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHL-LAEKLVYKKIQS 242
A + L ++P + L L +A KL++ K +
Sbjct: 284 KKAL-----FFWALELGHKYQEPEK-------------NGAFYNLKLGIARKLIFSKWKE 325
Query: 243 AIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAAR--RPTCNVLGSVG 299
A+G K VSGG +L + + A G++V GYGLTE+SPVIA +P G+VG
Sbjct: 326 ALGGEIKLIVSGGAALQERLARVFWAAGIQVLEGYGLTETSPVIAVNTWQPNGVRFGTVG 385
Query: 300 HPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDI 359
+++ ++KI G G + V+G + GY+KN ATK+A+DE+G+ +TGDI
Sbjct: 386 KVLSNLDVKI-----------GQDGEILVKGPSITAGYYKNEEATKEAIDEEGYFHTGDI 434
Query: 360 GWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQ 419
G ++ G L + R K+ + G+ V P LE + S+LI Q++V+G+
Sbjct: 435 GELSKD----------GFLKITDRKKEMFKTAGGKYVAPQVLENKFMESTLIGQVMVLGE 484
Query: 420 DQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE 455
+++ P A+IVP EE+ K I + E+ K+
Sbjct: 485 NRKFPSALIVPAFEELEKWCKHKGIAYTSKDEIIKD 520
>gi|189346901|ref|YP_001943430.1| AMP-dependent synthetase and ligase [Chlorobium limicola DSM 245]
gi|189341048|gb|ACD90451.1| AMP-dependent synthetase and ligase [Chlorobium limicola DSM 245]
Length = 610
Score = 195 bits (495), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 132/416 (31%), Positives = 215/416 (51%), Gaps = 49/416 (11%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 118
DD AT +YTSGTTG PKGVMLTH NL ++S ++ + D LS LP H YER G
Sbjct: 183 DDTATIIYTSGTTGLPKGVMLTHGNLCENVKSCSSVIRLDETDCSLSFLPLSHAYERTGG 242
Query: 119 YFI-FSRGIEL-MYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 176
Y++ F+ G + + ++ + ++ +P + +VP +++ + + + KQI + SA ++ +
Sbjct: 243 YYLLFACGAAIYLAESIETISLNIAEAKPTIIFTVPRLFDRMKANMLKQISSESAIKQKI 302
Query: 177 ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLV 236
++ E + N+K + + I H LA+KLV
Sbjct: 303 FNWAVKTG----------EQYHRQVNEKNRASITLSIQ--------------HNLADKLV 338
Query: 237 YKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVL 295
Y KI+ G + VSGG +LP I F++A+G+ + G+GLTE+SPV RP
Sbjct: 339 YHKIRKKFGGRLRYFVSGGAALPQKIGEFFQALGINILEGFGLTETSPVTNVNRPDKIKF 398
Query: 296 GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLN 355
G+VG + + ++KI AE E+L ++G +M+GY+++ +ATK+ + DGW
Sbjct: 399 GTVGPAVKNVQVKI--AEDGEIL---------LKGPNIMKGYWQDETATKEVI-RDGWFY 446
Query: 356 TGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIV 415
+GDIG I G L + R K IV S G+N+ P +E + S+ + Q++
Sbjct: 447 SGDIGEIDRD----------GYLKITDRKKHIIVTSGGKNIAPQPIENLIIESAFVDQVI 496
Query: 416 VIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSK 471
VIG+ + A+IVPD ++ A + SI EL + K I +Y +L + S+
Sbjct: 497 VIGEKRPFLIAVIVPDFVKLNEYAAQNSISAKTNKELIENKAIQQIYEKLMRNISR 552
>gi|114778103|ref|ZP_01452990.1| long-chain fatty-acid-CoA ligase [Mariprofundus ferrooxydans PV-1]
gi|114551521|gb|EAU54075.1| long-chain fatty-acid-CoA ligase [Mariprofundus ferrooxydans PV-1]
Length = 592
Score = 194 bits (494), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 141/402 (35%), Positives = 208/402 (51%), Gaps = 50/402 (12%)
Query: 36 ESRKAFSDSNDARKHYKYETIGSD--DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYD 93
E + S + DAR + + D D+AT +YTSGTTG+PKGVMLTH NLL + +
Sbjct: 146 EQQSIASIAADARWDNRLKAACPDREDLATLIYTSGTTGHPKGVMLTHGNLLADVEAGIG 205
Query: 94 IVPAENGDKFLSMLPPWHVYERACGYFIFSR-GIELMYT-AVRNLKDDLQRYQPHYMISV 151
VP D FLS LP H +ER G+F+ S G + Y +V L D+ +P MISV
Sbjct: 206 GVPVFADDLFLSFLPASHAFERTVGHFLPSACGAGIAYAESVTTLLRDMPEVRPTLMISV 265
Query: 152 PLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVA 211
P +YE +Y+G+ ++ SA V+R L R++ +R+ G ++Q L A
Sbjct: 266 PRLYEKIYAGVDAKLAAGSA----VSRWLFRLA------QRL--GLNRFNRRRQGDDLSA 313
Query: 212 LIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGV 270
+ WLWA L ++LV+ +++ +G +A VSGG +L I F A +
Sbjct: 314 VAAWLWA------------LLDRLVHARLREKMGGRIRAFVSGGAALHPDIARFLLAADI 361
Query: 271 KVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRG 330
V GYGLTE+SPV++ R G+VG + E+K AE E+L V+G
Sbjct: 362 IVLPGYGLTETSPVLSVNRQAYIKPGTVGPALPGVELKC--AEDGELL---------VKG 410
Query: 331 SQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVL 390
VMQGY++ P AT +A D DGWL TGDI I G + + R K+ +VL
Sbjct: 411 PMVMQGYWQQPLATAEAFDADGWLRTGDIVTI----------DGDGYITIMDRKKEIMVL 460
Query: 391 STGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDK 432
S GE + P +E+ + ++Q++VI + A++V D+
Sbjct: 461 SNGEKLSPAVIEQHIAANPCVQQVMVIADQRPFVTALVVVDQ 502
>gi|448593389|ref|ZP_21652387.1| acyl-CoA synthetase [Haloferax elongans ATCC BAA-1513]
gi|445730297|gb|ELZ81887.1| acyl-CoA synthetase [Haloferax elongans ATCC BAA-1513]
Length = 667
Score = 194 bits (493), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 140/423 (33%), Positives = 207/423 (48%), Gaps = 60/423 (14%)
Query: 28 DEIIDLGRESRKAFSDSNDARKHYKY-ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLH 86
D+I+ LG R+ D D + + + DD+A+ +YTSGTTG PKGV LTH N
Sbjct: 176 DDILTLGELYRRG-EDVFDEETYESWLDARDPDDLASLIYTSGTTGQPKGVKLTHWNFRS 234
Query: 87 QIRSLY---------DIVPAENGDKF-LSMLPPWHVYERACGYFI-FSRGIELMYT-AVR 134
+ Y D P D LS LP HV+ER G+F+ F+ G + Y +
Sbjct: 235 NVNESYRRFGPHPGRDDAPFIGPDAVALSFLPLAHVFERMAGHFMMFAAGATVAYAESPD 294
Query: 135 NLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIY 194
L+DD Q QP SVP VYE LY I+ Q S +R+ A + + Y
Sbjct: 295 TLRDDFQLVQPTTGTSVPRVYEKLYDAIRTQASESPLKKRIFEWA-VGVGKEY------- 346
Query: 195 EGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSG 253
+ P YL+ L H LA++LV+++++ A+G + + +SG
Sbjct: 347 ------HTSEAPGYLLEL---------------KHQLADRLVFEQVRDALGGNMEFFISG 385
Query: 254 GGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAE 313
GGSL + Y +G+ + GYGLTE+SPVI+ P +G++G+P+ + E+K+
Sbjct: 386 GGSLSAELCALYHGMGLPIFEGYGLTETSPVISVNPPEEPKIGTIGYPLRNVEVKLDKTV 445
Query: 314 TNEVL--PAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDG----WLNTGDIGWIAPHHS 367
+ L G G + VRG V +GY+ P T+ A +ED W TGDI + P
Sbjct: 446 VGDTLGDAGGDIGELLVRGPSVTEGYWNRPEETEAAFEEDDDGNRWFRTGDIVELRPD-- 503
Query: 368 RGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAI 427
G L RAK +VLSTG+NV P +E+A S ++ Q +V+G ++ A+
Sbjct: 504 --------GYLAFRERAKQILVLSTGKNVAPGPIEDAFASSDVVEQCMVLGDGRKFVSAL 555
Query: 428 IVP 430
IVP
Sbjct: 556 IVP 558
>gi|448312176|ref|ZP_21501926.1| AMP-dependent synthetase and ligase [Natronolimnobius
innermongolicus JCM 12255]
gi|445602683|gb|ELY56655.1| AMP-dependent synthetase and ligase [Natronolimnobius
innermongolicus JCM 12255]
Length = 654
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 148/446 (33%), Positives = 215/446 (48%), Gaps = 70/446 (15%)
Query: 29 EIIDLGRES--RKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNL-- 84
EI D G E+ R+A+ DA + DD+A+ +YTSGTTG PKGV LTH N
Sbjct: 182 EIYDRGEENFDREAYEARIDA--------VELDDLASLIYTSGTTGQPKGVQLTHWNFRS 233
Query: 85 -LHQIRSLYDIVPAENGD--------KFLSMLPPWHVYERACGYFI-FSRGIELMYTAVR 134
++ +R Y P + D K +S LP HV+ER G+F+ F+ G + Y
Sbjct: 234 NVNAVRKRYGPRPDKADDVPTLDQESKAMSYLPLAHVFERTAGHFVLFASGASVAYAEDP 293
Query: 135 N-LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRI 193
+ L++D + QP SVP VYE +Y GI++Q S A RR+ A + Y
Sbjct: 294 DTLQEDFELVQPTTATSVPRVYEKIYDGIREQASQSDAKRRIFEWA-TDVGVQYQE---- 348
Query: 194 YEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVS 252
A IL LA+KLV+ ++ A+G + +S
Sbjct: 349 ------------------------ADSPGPILKAKQALADKLVFSTVREALGGEIELLIS 384
Query: 253 GGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDA 312
GGGSL + Y A+G+ + GYGLTE+SPV+ P +G++G ++ ++K+ ++
Sbjct: 385 GGGSLSKELCQLYHAMGLPIYEGYGLTETSPVVTTNPPEAVKIGTIGPALDGVDLKVDES 444
Query: 313 ETNE---VLPAGSKGIVKVRGSQVMQGYFKNPSATKQAL--DEDG--WLNTGDIGWIAPH 365
N+ G G + V G V QGY+ P AT+ + D+DG W TGDI I P
Sbjct: 445 VANQEAFTDDPGDVGELLVSGPNVTQGYWNKPGATQGSFTEDDDGTRWFRTGDIVHIRPD 504
Query: 366 HSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPG 425
G L R K IVLSTG+NV P +E+A S ++ Q +V G ++ G
Sbjct: 505 ----------GYLEFRDRVKQIIVLSTGKNVAPGPIEDAFAASEIVEQAMVTGDGEKFIG 554
Query: 426 AIIVPDKEEVLMAAKRLSIVHADASE 451
A++VP++E V A I D SE
Sbjct: 555 ALLVPNEEHVRDWADEEGIDLPDDSE 580
>gi|325105263|ref|YP_004274917.1| AMP-dependent synthetase and ligase [Pedobacter saltans DSM 12145]
gi|324974111|gb|ADY53095.1| AMP-dependent synthetase and ligase [Pedobacter saltans DSM 12145]
Length = 592
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 152/476 (31%), Positives = 236/476 (49%), Gaps = 74/476 (15%)
Query: 7 LWGKKSSVAPDIVEEIPVFSYD---------EIIDLGRESRKAFSDSNDARKHYKYETIG 57
L+ K +A + ++I +++++ EII+ ++F D ++ R I
Sbjct: 117 LYQKLKRIAEENGQDIKIYTFEKIDGAPHWTEIIE--THDDESFIDLDEYRSK-----IT 169
Query: 58 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERAC 117
DD+ T +YTSGTTG PKGVMLTHKNLL I + + P E + LS LP H++ER
Sbjct: 170 GDDLLTLIYTSGTTGTPKGVMLTHKNLLSNIEASAKLYP-EGVTRALSFLPLSHIFERMV 228
Query: 118 GYFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 176
Y F GI + Y ++ + +L +PH SVP + E +Y ++V
Sbjct: 229 VYMYFYLGISVYYAESLDTIVQNLSEVKPHCFTSVPRLLEKVYD-------------KIV 275
Query: 177 ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHL-LAEKL 235
A+ T K+ + L K Y + + W + L L LA KL
Sbjct: 276 AKG-----HELTGIKKSLFFWALNLGLK---YELDGANGAW--------YELQLKLARKL 319
Query: 236 VYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTC-- 292
++KK + A+G VSGG +L + + G+KV GYGLTE+SPVI+ P
Sbjct: 320 IFKKWKDALGGEIMLIVSGGAALQERLARVFWGAGIKVLEGYGLTETSPVISVNGPRKGE 379
Query: 293 NVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDG 352
G+VG P+ + E+KI AE E+L +G +M+GY+K AT++A+ E G
Sbjct: 380 TKFGTVGKPLFNVEVKI--AEDGEIL---------CKGPSLMKGYYKRDDATQEAVTEGG 428
Query: 353 WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIR 412
W +TGDIG + G L + R K+ + G+ V P LE S+ I
Sbjct: 429 WFHTGDIGNLKD-----------GFLTITDRKKEVFKTAGGKYVAPQVLETKFKESTFIE 477
Query: 413 QIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK-EKTISLLYGELRK 467
Q++V+G+++R P A+IVP+ E+V+ AKR I D +L+K +K I ++ E+ +
Sbjct: 478 QVMVLGENRRFPSALIVPNFEKVIEWAKRNQIAETDHQKLAKNQKVIDKIWSEVDR 533
>gi|300784352|ref|YP_003764643.1| long-chain acyl-CoA synthetase [Amycolatopsis mediterranei U32]
gi|384147618|ref|YP_005530434.1| long-chain acyl-CoA synthetase [Amycolatopsis mediterranei S699]
gi|399536237|ref|YP_006548899.1| long-chain acyl-CoA synthetase [Amycolatopsis mediterranei S699]
gi|299793866|gb|ADJ44241.1| long-chain acyl-CoA synthetase [Amycolatopsis mediterranei U32]
gi|340525772|gb|AEK40977.1| long-chain acyl-CoA synthetase [Amycolatopsis mediterranei S699]
gi|398317007|gb|AFO75954.1| long-chain acyl-CoA synthetase [Amycolatopsis mediterranei S699]
Length = 598
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 130/393 (33%), Positives = 197/393 (50%), Gaps = 53/393 (13%)
Query: 45 NDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPA--ENGDK 102
+D H + + +D++AT VYTSGTTG PKGV LTH+NLL +IR+ + P E G+
Sbjct: 166 SDDELHDRRREVSADELATIVYTSGTTGRPKGVELTHRNLLAEIRADIEAFPQLMEQGNS 225
Query: 103 FLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLYSG 161
L LP HV RA + + L +T V+NL DL ++P ++++VP V+E +Y+
Sbjct: 226 LLCFLPLAHVLARAIAVTALTARVTLGHTPDVKNLVADLGTFRPTFVVAVPRVFEKVYNS 285
Query: 162 IQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARII 221
+++ + + A ++++ K G L K
Sbjct: 286 AKQKAHSEGKGKIFDAAEATAVAYSEAQDKG---GAGLGLQLK----------------- 325
Query: 222 CAILWPLHLLAEKLVYKKIQSAIG-ISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTE 280
HL+ +KLVY K+++A+G A VSGG L + F+ IGV V GYGLTE
Sbjct: 326 -------HLVFDKLVYGKLRAALGGRCVAAVSGGAPLGARLAHFFRGIGVPVFEGYGLTE 378
Query: 281 SSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKN 340
+S T +G+VG P+N T ++I D G V ++G V + Y+ N
Sbjct: 379 TSAAANVNTQTAFRVGTVGKPVNGTSVRIAD-----------DGEVLLKGDVVFRAYYNN 427
Query: 341 PSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLE 400
P ATK+AL DGW +TGD+G + P G L + GR K+ IV + G+NV P
Sbjct: 428 PQATKEAL-TDGWFHTGDLGELDPD----------GFLKITGRKKEIIVTAGGKNVAPSG 476
Query: 401 LEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 433
LE+ S L+ Q +V+G + A++ D+E
Sbjct: 477 LEDTIKASPLVSQAMVVGDQRPFIAALVTVDEE 509
>gi|268317263|ref|YP_003290982.1| AMP-dependent synthetase and ligase [Rhodothermus marinus DSM 4252]
gi|262334797|gb|ACY48594.1| AMP-dependent synthetase and ligase [Rhodothermus marinus DSM 4252]
Length = 630
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 138/423 (32%), Positives = 211/423 (49%), Gaps = 60/423 (14%)
Query: 17 DIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKG 76
D VE P++++ ++++ GR+ R A ++ AR + I D+AT +YTSGTTG PKG
Sbjct: 160 DRVEGRPLYTFAQLLEAGRQRRAADPEAI-ARLRAQ---IRPGDLATIIYTSGTTGRPKG 215
Query: 77 VMLTHKNL----LHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA 132
VML+H+N+ L + P +G+ LS LP HV+ R Y + +T
Sbjct: 216 VMLSHENISFNALTSFSGIKQYRPGPDGEVALSFLPLTHVFARTLFYGYLYYATSVYFTT 275
Query: 133 VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKR 192
L+D L++ +P +VP V E +Y + ++ + + R + ++ R
Sbjct: 276 PDALRDALRQVRPTTFATVPRVLEKIYGALVERAAAMPGLKGRIFRWALDLA-------R 328
Query: 193 IYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHL-LAEKLVYKKIQSAIGISKAGV 251
YE L R + L+ L L +A++LVY+K + A+G A +
Sbjct: 329 RYE---LGREPRG-------------------LYRLQLAVADRLVYRKWREAMGGRIAFI 366
Query: 252 -SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIV 310
+GG +L + + A G+ + GYGLTE+SPVI RP N G+VG PI E+KI
Sbjct: 367 IAGGAALSAELANIFAAAGIPILQGYGLTETSPVITYNRPELNRAGTVGVPIPGVEVKI- 425
Query: 311 DAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGR 370
AE E+L RG VM GY+K+P T++ +DE+GW +TGDIG+
Sbjct: 426 -AEDGEIL---------TRGPHVMLGYYKDPERTREVIDEEGWFHTGDIGYFTEE----- 470
Query: 371 SRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVP 430
G LV+ R KD LSTG+ V P LE+ L+ Q +V+G + A+I P
Sbjct: 471 -----GFLVITDRKKDLFKLSTGKYVMPQPLEQRLTADPLVEQALVVGPGYKFTAALIFP 525
Query: 431 DKE 433
D+E
Sbjct: 526 DEE 528
>gi|78189102|ref|YP_379440.1| long-chain fatty-acid-CoA ligase [Chlorobium chlorochromatii CaD3]
gi|78171301|gb|ABB28397.1| long-chain fatty-acid-CoA ligase [Chlorobium chlorochromatii CaD3]
Length = 610
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 141/437 (32%), Positives = 220/437 (50%), Gaps = 54/437 (12%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 118
DD+AT +YTSGTTG PKGVMLTH+NL ++S ++ D LS LP H YER G
Sbjct: 183 DDVATIIYTSGTTGLPKGVMLTHRNLCENVKSCSTVLELNESDCALSFLPLSHAYERTGG 242
Query: 119 YFI-FSRGIEL-MYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSA-ARRV 175
Y++ F+ G ++ + ++ + ++ +P + +VP +++ + + + KQI A+++
Sbjct: 243 YYLLFACGTQIYIAESIETVSLNMSEVKPTIIFTVPRLFDRIRAILLKQIGEQPPPAQKL 302
Query: 176 VARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKL 235
AL Q Y AL A + A+ H LA +L
Sbjct: 303 FEWAL----------------------QTGEEYYQALSSCGSAPPLLAMQ---HNLASQL 337
Query: 236 VYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNV 294
+YKKI +G + VSGG +LP I F++A+ V + G+GLTE+SPV RP
Sbjct: 338 IYKKIHQKMGGRLRYFVSGGAALPQKIGEFFQALDVPILEGFGLTETSPVTHVNRPEKIK 397
Query: 295 LGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWL 354
G+VG IN+ E +I AE E+L ++G +M+GY+ + AT++ L +DGW
Sbjct: 398 YGTVGKAINNVETRI--AEDGEIL---------LKGPNIMKGYWNDEEATREVL-KDGWF 445
Query: 355 NTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQI 414
TGD+G I G L + GR K IV S G+N+ PL +E + I Q+
Sbjct: 446 YTGDLGEI----------DSDGYLKITGRKKHIIVTSGGKNIAPLPIENLIAENPFIGQV 495
Query: 415 VVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTS---K 471
+VIG+ + A+IVP + A++ SI EL + K + +Y EL + S
Sbjct: 496 LVIGEKRPFLVALIVPAFPHLQAHARKESIQATTNRELMEHKKVQQIYEELLRTISMQLA 555
Query: 472 CSFQIGPIHVVDEPFTV 488
+I +++ PFT+
Sbjct: 556 THEKIRKFILIENPFTI 572
>gi|326800700|ref|YP_004318519.1| long-chain-fatty-acid--CoA ligase [Sphingobacterium sp. 21]
gi|326551464|gb|ADZ79849.1| Long-chain-fatty-acid--CoA ligase [Sphingobacterium sp. 21]
Length = 633
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 132/395 (33%), Positives = 199/395 (50%), Gaps = 50/395 (12%)
Query: 54 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYD-IVPAENGDKFLSMLPPWHV 112
E I DI+T +YTSGTTG PKGVMLTH NL + +R+ D I+ + D FLS LP HV
Sbjct: 185 EGILMSDISTLIYTSGTTGTPKGVMLTHSNLTNNVRACLDQILEVDQHDTFLSFLPLSHV 244
Query: 113 YERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSS 170
+ER Y + + G ++ Y ++ L ++ +P + +VP + E ++ K S
Sbjct: 245 FERTATYHVCLALGAKIAYAQSIDLLAKNMYEVKPTVICAVPRLLEKIHDKAMKNGIQSG 304
Query: 171 AARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHL 230
A+ + + + Y K + K+P IL +
Sbjct: 305 GAKAAIFKWALLTGKQYREKKEL---------GKKPG---------------PILTTQYN 340
Query: 231 LAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARR 289
LAE+LV+ KI+ G K +SGGG+LP ++ F+ IG+K+ GYGLTE+SPV+A
Sbjct: 341 LAERLVFNKIKEKTGGRLKFMISGGGALPQNVGEFFGNIGIKILEGYGLTETSPVVAVTE 400
Query: 290 PTCNVLGSVGHPINHTEIKIVDAETNEVLPAGS-----------KGIVKVRGSQVMQGYF 338
V G+VG + EI I D E+ ++ S +G + +RG +M+GY+
Sbjct: 401 FHRQVYGTVGRVLPGIEIAIQDIESLKIHTVQSHASFDPNLETEEGEIIIRGHCIMKGYW 460
Query: 339 KNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 398
P TK +D DGW +TGDIG + G L + R K+ IV + G+NV P
Sbjct: 461 NKPEETKHVIDSDGWFHTGDIG-----------KFYKGNLKITDRLKNMIVNAYGKNVYP 509
Query: 399 LELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 433
+E L+S I QI +IG ++ A+IVP++E
Sbjct: 510 TPVENTYLKSKRIEQIFLIGDNREYLTALIVPNQE 544
>gi|313672314|ref|YP_004050425.1| amp-dependent synthetase and ligase [Calditerrivibrio nitroreducens
DSM 19672]
gi|312939070|gb|ADR18262.1| AMP-dependent synthetase and ligase [Calditerrivibrio nitroreducens
DSM 19672]
Length = 606
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 151/451 (33%), Positives = 221/451 (49%), Gaps = 63/451 (13%)
Query: 22 IPVFSYDEI----IDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGV 77
+PVF++ +I I L E +++ + +D+AT +YTSGTTG PKGV
Sbjct: 149 LPVFTFLQISEISIPLNDEEKRSIESG--------ISEVKPEDVATIIYTSGTTGFPKGV 200
Query: 78 MLTHKNLLHQI-RSLYDIVPAENGDKFLSMLPPWHVYERACGYFI-FSRGIELMYTA-VR 134
MLTH+NL+ +I I + + FLS LP HV ER+ GY+I G E+++ +
Sbjct: 201 MLTHRNLMSEIFLGTKKIEIMTDKEVFLSFLPLSHVLERSVGYYIPVYNGCEIVFAENID 260
Query: 135 NLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIY 194
+ ++ P MISVP ++E +YS I + + + + ++ + I Y K Y
Sbjct: 261 KVAQNILEVNPTMMISVPRLFEKIYSRIYENVHSMPSFKKSLFHKAIEFGRWYVHKK--Y 318
Query: 195 EGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAG-VSG 253
E +K L L + +KL++ KI+ G G VSG
Sbjct: 319 E-------EKNVDTLSEL---------------KYKFYDKLIFSKIRERFGNRFKGFVSG 356
Query: 254 GGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAE 313
G L +I+ F+ AIG+ V GYGLTE+SP I P+ +GSVG P TE KI AE
Sbjct: 357 GAPLDKNINEFFWAIGIPVYEGYGLTETSPGICINCPSHVRIGSVGTPFEETEFKI--AE 414
Query: 314 TNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRR 373
E+L VRG VM+GY+KN TK+A + D W TGDIG I R
Sbjct: 415 DGEIL---------VRGPMVMKGYYKNEETTKEAFEGD-WFKTGDIGEI----------R 454
Query: 374 CGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 433
G + +++ R K+ IV S G+N+ P +E I Q V G + A++VP+ E
Sbjct: 455 DGYIYIVD-RKKELIVTSGGKNISPQHIENELKLDKYISQAYVHGDRKPYLVALLVPNME 513
Query: 434 EVLMAAKRLSIVHADASELSKEKTISLLYGE 464
+L AK I + D S+L+K + LY E
Sbjct: 514 RLLEFAKEKGIDYLDISDLAKNPEVIKLYNE 544
>gi|433603463|ref|YP_007035832.1| Long-chain-fatty-acid-CoA ligase FadD15 [Saccharothrix espanaensis
DSM 44229]
gi|407881316|emb|CCH28959.1| Long-chain-fatty-acid-CoA ligase FadD15 [Saccharothrix espanaensis
DSM 44229]
Length = 602
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 142/413 (34%), Positives = 208/413 (50%), Gaps = 66/413 (15%)
Query: 28 DEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQ 87
DE+ LG A +DAR + E +G+DD AT VYTSGTTG PKG LTH NLL +
Sbjct: 160 DELTALG-----AGVSDDDARA--RREEVGADDTATIVYTSGTTGRPKGCELTHYNLLSE 212
Query: 88 IRSLYDIVPA--ENGDKFLSMLPPWHVYERA---CGYFIFSRGIELMYTA-VRNLKDDLQ 141
+RS P + G+ L LP H+ RA CG +++R + L +T VRNL +DLQ
Sbjct: 213 VRSDVAAFPQLMQAGNSLLVFLPLAHILARAIALCG--VYTR-VTLGHTPDVRNLVEDLQ 269
Query: 142 RYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTR 201
++P ++++VP V+E +Y+G +++ +A + + A + AY+ +
Sbjct: 270 SFRPTFVVAVPRVFEKVYNGAKQK--AHAAGKGKIFDAAEATAVAYSQALDGGGAGLGLK 327
Query: 202 NQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIG-ISKAGVSGGGSLPMH 260
+ H + KLVY K+Q+A+G A VSGG L
Sbjct: 328 VK-------------------------HAVFSKLVYSKLQAALGGRCIAAVSGGAPLGAR 362
Query: 261 IDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA 320
+ F+ +GV V GYGLTE+S T +G+VG PI T ++I AE E+L
Sbjct: 363 LAHFFRGVGVPVLEGYGLTETSAAACVNTETAFRVGTVGRPIAGTAVRI--AEDGEIL-- 418
Query: 321 GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVL 380
++G V + Y+ NP+AT +AL EDGW ++GD+G + G L +
Sbjct: 419 -------IKGDVVFRSYWNNPTATAEAL-EDGWFHSGDLGELDDD----------GFLRI 460
Query: 381 EGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 433
GR K+ IV + G+NV P LE+ LI Q +V+G Q GA+I D E
Sbjct: 461 TGRKKEIIVTAGGKNVSPAVLEDRLRSHPLISQCMVVGDAQPFIGALITIDPE 513
>gi|373457238|ref|ZP_09549005.1| AMP-dependent synthetase and ligase [Caldithrix abyssi DSM 13497]
gi|371718902|gb|EHO40673.1| AMP-dependent synthetase and ligase [Caldithrix abyssi DSM 13497]
Length = 652
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 141/459 (30%), Positives = 235/459 (51%), Gaps = 69/459 (15%)
Query: 4 IILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARK--HYKYETIGSDDI 61
+ILL ++S + +I+ DE++ G+E F + D RK + ++ I DD
Sbjct: 133 VILLDARESYESDEIL-------VDEVLARGKE----FLKNEDGRKRLNQTWQAIEEDDY 181
Query: 62 ATYVYTSGTTGNPKGVMLTHKNLL---HQIRSLYDIVPAENGDKFLSML-PPW-HVYERA 116
AT +Y+SGTT +PKGV+L+HKN + Q ++ DI P F+++L PW H +
Sbjct: 182 ATIMYSSGTTADPKGVILSHKNYVVNTEQSLTVMDIPPY-----FVTLLILPWDHAFAHT 236
Query: 117 CG-YFIFSRGIEL--------MYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIF 167
G Y + G + ++N+ +L+ +PH+++SVP + + I+K I
Sbjct: 237 VGLYTLIKNGASMAAVQSGKTQLETLKNIPKNLKEIRPHFLLSVPALAKNFRKNIEKAIR 296
Query: 168 TSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWP 227
A + + ++I++ Y EG W + + P
Sbjct: 297 DKGKATERLFQQALKIAYLYNG-----EG------------------WNKGKGFRKVYKP 333
Query: 228 LHLLAEKLVYKKIQSAIGISKAGVSGGGSL-PMHIDLFYEAIGVKVQVGYGLTESSPVIA 286
L+ L +K++++KI+ + G GGG+L + + F+ AIG+ + GYGLTE++PVI+
Sbjct: 334 LYALYDKVLFRKIRDSFGGRLQFFIGGGALLDIEMQRFFYAIGIPMFQGYGLTEAAPVIS 393
Query: 287 ARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQ 346
+ +P + LG+ G + E+KIVD NE LP G +G + V+G VM GY+KNP+AT+
Sbjct: 394 SNKPHEHKLGTSGKVLKGMEVKIVDERGNE-LPTGQRGEICVKGENVMVGYWKNPTATEN 452
Query: 347 ALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAAL 406
AL DGWL+TGD+G++ G L + GR K ++ + GE P +EEA L
Sbjct: 453 AL-RDGWLHTGDLGYLDEE----------GYLYVLGREKSLLIGNDGEKYSPEGIEEAIL 501
Query: 407 -RSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI 444
S I QI++ A++VP+K V+ A+ ++
Sbjct: 502 DHSPYIDQIMLYNNQSPYTIALVVPNKAAVIEWARENNV 540
>gi|21673982|ref|NP_662047.1| long-chain-fatty-acid-CoA ligase [Chlorobium tepidum TLS]
gi|21647127|gb|AAM72389.1| long-chain-fatty-acid--CoA ligase, putative [Chlorobium tepidum
TLS]
Length = 649
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 133/436 (30%), Positives = 218/436 (50%), Gaps = 53/436 (12%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 118
DD+AT +YTSGTTG PKGVMLTH+N+ ++S ++ + D LS LP H YER G
Sbjct: 223 DDVATLIYTSGTTGLPKGVMLTHRNICENVKSCSTVIRIDQTDSSLSFLPLSHAYERTGG 282
Query: 119 YFI-FSRGIEL-MYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 176
Y++ F+ G + + +V + ++ +P + +VP +++ + + I K + + +
Sbjct: 283 YYLMFACGARINLAESVETISLNISEAKPTIIFTVPRLFDRMKASILKSVTSEGGVKE-- 340
Query: 177 ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLV 236
+I F + Y KQ L + +L H LA+KLV
Sbjct: 341 -----KIFFWAVSTGEKY--------HKQ----------LATGKVSPLLAVQHNLADKLV 377
Query: 237 YKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVL 295
Y KI+ G + VSGG +LP F+++IG+ + G+GLTE+SPV RP
Sbjct: 378 YSKIRKKFGGKLRYFVSGGAALPQKTGEFFQSIGITILEGFGLTETSPVTNVNRPEKVKF 437
Query: 296 GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLN 355
G+VG P+ + E+KI G + ++G +M+GY+K+ +A+ + L DGWL
Sbjct: 438 GTVGLPVKNVEVKI-----------APDGEIMLKGPNIMKGYWKDEAASAEVL-RDGWLY 485
Query: 356 TGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIV 415
TGDIG + G L + R K IV S G+N+ PL++E L S + Q +
Sbjct: 486 TGDIGEVDSE----------GYLKITDRKKHIIVTSGGKNIAPLQIENLILDSPYVDQAM 535
Query: 416 VIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSK---C 472
++G+ + A+IVPD ++ A I + EL K + +Y +L K S+
Sbjct: 536 IVGEKRPFLIALIVPDFLKLRDFAAEHQIKASSTKELINTKEVIEVYEKLLKSISRQLAT 595
Query: 473 SFQIGPIHVVDEPFTV 488
++ +++EPF++
Sbjct: 596 HEKVRKFLLLEEPFSI 611
>gi|228472919|ref|ZP_04057676.1| long-chain-fatty-acid--CoA ligase family protein [Capnocytophaga
gingivalis ATCC 33624]
gi|228275501|gb|EEK14278.1| long-chain-fatty-acid--CoA ligase family protein [Capnocytophaga
gingivalis ATCC 33624]
Length = 592
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 148/498 (29%), Positives = 233/498 (46%), Gaps = 86/498 (17%)
Query: 7 LWGKKSSVAPDIVEEIPVFSYD---------EIIDLGRESRKAFSDSNDARKHYKYETIG 57
L+ K SS+ +I VF++D EI+ LG + ++N A+ E I
Sbjct: 118 LFEKVSSIVSEIATLEEVFTFDAVEGARGWREILSLGED------NTNQAQVDSLKEQIQ 171
Query: 58 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERAC 117
D+AT +YTSGTTG PKGVML+H N++ I++ ++ VP ++GD LS LP HV+ER
Sbjct: 172 PTDMATIIYTSGTTGKPKGVMLSHDNIISNIKNCHERVPVKSGDICLSFLPVCHVFERML 231
Query: 118 GYFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGI-QKQIFTSSAARRV 175
Y GI L + + + ++ +P + VP V E +Y I K + S A+ +
Sbjct: 232 TYLYQYNGIRLYFAESFEKVAVNIGEVKPRLITVVPRVVEKVYDSIYSKGVALSGIAKSL 291
Query: 176 VARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKL 235
AL R+ + Y + NQK Y + L +A KL
Sbjct: 292 FFWAL-RLGYQYEPY-----------NQKGWWYSLKL-----------------KIARKL 322
Query: 236 VYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNV- 294
++ K + A+G + G +L + + A G+ + GYGLTE+SPVI+ ++
Sbjct: 323 IFSKWKKALGGQLQMICGSAALQPRLVRVFSAAGIPIWEGYGLTETSPVISVNCKKGHLW 382
Query: 295 -LGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGW 353
+G++G PI+H E+KI AE E+L +GS +M GY+KN T A+DEDG+
Sbjct: 383 KIGTIGKPIDHIEVKI--AEDGEIL---------CKGSNIMLGYYKNEEQTHNAIDEDGF 431
Query: 354 LNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQ 413
+TGDIG++ G L + R K+ S G+ + P +E +S I Q
Sbjct: 432 FHTGDIGFLDKE----------GFLTITDRKKEMFKTSGGKYIAPQYIENKLKQSRFIEQ 481
Query: 414 IVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE-------------KTISL 460
+V+G+ ++ P A + + V KR H D LS E + +
Sbjct: 482 AMVVGEGEKMPAAFLQVNFAFVREWLKR----HGDKQTLSNEALVKDERVRERITQEVER 537
Query: 461 LYGELRKWTSKCSFQIGP 478
+ +L KW +F + P
Sbjct: 538 INKKLGKWEQIKAFDLTP 555
>gi|373459321|ref|ZP_09551088.1| AMP-dependent synthetase and ligase [Caldithrix abyssi DSM 13497]
gi|371720985|gb|EHO42756.1| AMP-dependent synthetase and ligase [Caldithrix abyssi DSM 13497]
Length = 615
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 134/437 (30%), Positives = 210/437 (48%), Gaps = 54/437 (12%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 118
+DIAT +YTSGTTG PKGVMLT +N Q ++L + D L LP H Y+++
Sbjct: 177 EDIATIIYTSGTTGRPKGVMLTQRNFFSQFKALDPLFNFSENDIELCFLPLSHAYQKSST 236
Query: 119 YFIFSRGIELMYTAV-RNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 177
++ S G+ + Y + + D + +P +M+ VP +YE +Y+ + + +S +R +
Sbjct: 237 HWTQSHGVTVYYCENPKEVLDCFKEVRPTFMVGVPRLYEKMYAKVFATLENASGFKRGLF 296
Query: 178 RALIRI--SFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKL 235
+ + + Y AFK+ I L H LA KL
Sbjct: 297 EWALEVGKEYQYKAFKK--------------------------ENISPYLRLKHTLARKL 330
Query: 236 VYKKIQSAIGISKAGVSGGGS-LPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNV 294
V KI++ +G S GG+ L I+ F+ A G+ + GYGLTE+SPV++ RP
Sbjct: 331 VLNKIRNIMGGRLNFFSAGGAPLSSEIEEFFFAAGIFIAQGYGLTETSPVVSCNRPDQFK 390
Query: 295 LGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWL 354
G+ G +N ++KI A E+L V+G VM+GY++ P T + L DGW
Sbjct: 391 FGTPGKVVNICQVKI--APDGEIL---------VKGENVMKGYYRKPELTAEVLSPDGWF 439
Query: 355 NTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQI 414
TGDIG++ G L + R KD I+ + G+N+ P +E + I QI
Sbjct: 440 RTGDIGYLD----------SDGFLHITDRKKDIIITAGGKNIAPQPIESHIGKDYYIEQI 489
Query: 415 VVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK-EKTISLLYGELRKWTSKCS 473
+IG ++ A+IVP E + A++ I + SEL K EK I L + + S
Sbjct: 490 ALIGDKRKYITALIVPSFEALEEFAQKHDIKYDTLSELVKNEKVIQFYRQRLDELSKPLS 549
Query: 474 F--QIGPIHVVDEPFTV 488
+I ++ +PF+V
Sbjct: 550 AYERIKKFTLLSQPFSV 566
>gi|419802454|ref|ZP_14327641.1| AMP-binding enzyme [Haemophilus parainfluenzae HK262]
gi|419846035|ref|ZP_14369293.1| AMP-binding enzyme [Haemophilus parainfluenzae HK2019]
gi|385190316|gb|EIF37764.1| AMP-binding enzyme [Haemophilus parainfluenzae HK262]
gi|386414665|gb|EIJ29217.1| AMP-binding enzyme [Haemophilus parainfluenzae HK2019]
Length = 605
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 137/441 (31%), Positives = 221/441 (50%), Gaps = 56/441 (12%)
Query: 27 YDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLH 86
+DE+I LG +A ++ A K DD+ T +YTSGTTG PKGVML + NL H
Sbjct: 152 WDELIQLGAAEFQAEFETRLANK-------TMDDLFTIIYTSGTTGEPKGVMLDYNNLAH 204
Query: 87 QIRSLYDIVPAENGDKF-LSMLPPWHVYERACGYFIFSRGIELMYTAVRN-LKDDLQRYQ 144
Q+ + +DI N D+ LS LP H++ERA ++ RG L Y N +++ L +
Sbjct: 205 QLEA-HDIALDVNQDEVSLSFLPFSHIFERAWVAYVLHRGAILCYLENTNQVREALMEVR 263
Query: 145 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQK 204
P +M +VP YE +YS + ++ + R+++ I + ++ ++ L++N+K
Sbjct: 264 PTFMCAVPRFYEKIYSAVLDKVQKAPFIRQMIFHLAIAVG------QKRFD--LLSQNKK 315
Query: 205 QPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDL 263
P + L +++A+KLV+ K++S +G K GG L I L
Sbjct: 316 VPFF----------------LQKCYVIADKLVFSKLRSLLGGRIKMMPCGGAKLEPSIGL 359
Query: 264 FYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSK 323
F+ IG+ +++GYG+TE++ ++ S+G + +TE+KI E NE+L
Sbjct: 360 FFHCIGINIKLGYGMTETTATVSCWDDHHFNPNSIGKLMPNTEVKI--GENNEIL----- 412
Query: 324 GIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGR 383
VRG VM+GY+K P T QA EDG+L TGD G G L + R
Sbjct: 413 ----VRGGMVMKGYYKKPEETTQAFTEDGFLKTGDAGEFDAE----------GNLFITDR 458
Query: 384 AKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLS 443
K+ + S G+ + P +E + I QI +I ++ A+IVP + V A++L+
Sbjct: 459 IKELMKTSNGKYIAPQYIESKIGKDKFIEQIAIIADAKKYVSALIVPCFDSVEEYARKLN 518
Query: 444 IVHADASELSKEKTISLLYGE 464
I + D EL K I ++ +
Sbjct: 519 IKYQDRIELLKHSEIIKMFEQ 539
>gi|253700714|ref|YP_003021903.1| AMP-dependent synthetase and ligase [Geobacter sp. M21]
gi|251775564|gb|ACT18145.1| AMP-dependent synthetase and ligase [Geobacter sp. M21]
Length = 603
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 137/407 (33%), Positives = 197/407 (48%), Gaps = 55/407 (13%)
Query: 62 ATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPA-ENGDKFLSMLPPWHVYERACGYF 120
AT +YTSGTTG PKG +LTH NL+ +R+ D V GD FLS LP HV+ER+ GY+
Sbjct: 184 ATIIYTSGTTGTPKGAVLTHGNLVFDVRATLDKVGGVGQGDLFLSFLPLSHVFERSAGYY 243
Query: 121 I-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 178
+ S G + + ++ + +++ P M+ VP +E +YS I + + S +R + R
Sbjct: 244 LPLSCGAAIAFADSMEKISENMMELHPTIMVCVPRFFEKIYSRIYEAVHQLSLFKRKMFR 303
Query: 179 ALIRIS--FAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLV 236
+ + +AY + Y F L+ H +A++LV
Sbjct: 304 RALAVGRRYAYARYIDKYVPFWLSLQ--------------------------HAIADRLV 337
Query: 237 YKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVL 295
+ K++S G K SGG L I+ F+ +IGV V GYGLTE+SPV+ +
Sbjct: 338 FSKLRSRFGDRLKFCASGGAPLDREINEFFWSIGVPVFEGYGLTETSPVLCSNSFDALRF 397
Query: 296 GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLN 355
GSVG P+ TEI I G V RG QVM GYF + +AT++AL DGW
Sbjct: 398 GSVGTPLASTEIAI-----------AGDGEVLARGPQVMAGYFNDEAATREAL-VDGWFR 445
Query: 356 TGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIV 415
TGDIG R G L + R KD IV + G+N+ P +E R I Q
Sbjct: 446 TGDIG-----------RMEEGYLYITDRKKDLIVTAAGKNIAPQPIENLLKRDKYISQAY 494
Query: 416 VIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLY 462
V G + A++VP E +L A+ I + D +L + + LY
Sbjct: 495 VYGDRKPYLTALLVPTLERLLEFAQERKIAYHDLEDLVVHQPVIELY 541
>gi|429191224|ref|YP_007176902.1| AMP-forming long-chain acyl-CoA synthetase [Natronobacterium
gregoryi SP2]
gi|429135442|gb|AFZ72453.1| AMP-forming long-chain acyl-CoA synthetase [Natronobacterium
gregoryi SP2]
Length = 653
Score = 192 bits (487), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 128/404 (31%), Positives = 201/404 (49%), Gaps = 55/404 (13%)
Query: 57 GSDDIATYVYTSGTTGNPKGVMLTHKNL---LHQIRSLY--------DIVPAENGDKFLS 105
G DD+A+ +YTSGTTG PKGV LTH N ++QIR D+ + +S
Sbjct: 209 GLDDLASLIYTSGTTGQPKGVELTHGNFRANVNQIRKRMAPRPDRDDDVASVDENSLTVS 268
Query: 106 MLPPWHVYERACGYFI-FSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQ 163
LP HV+ER G+F+ F+ G + Y + L++D + +P+ SVP VYE +Y I+
Sbjct: 269 YLPLAHVFERTAGHFLMFASGACVGYAEDPDTLQEDFETVEPNTATSVPRVYEKIYDAIR 328
Query: 164 KQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICA 223
+Q S+ R+ A +++ A
Sbjct: 329 EQASESAVKERIFDWATD-----------------------------VGVEYQEADTPGP 359
Query: 224 ILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESS 282
IL LA+KLV+ ++ +G + + +SGGGSL + Y A+G+ + GYGLTE++
Sbjct: 360 ILSAKQALADKLVFSTVREGLGGNLEILISGGGSLSKELCTLYHAMGLPIYEGYGLTETA 419
Query: 283 PVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVL--PAGSKGIVKVRGSQVMQGYFKN 340
PV+ P +G++G + E++I ++ N+ G G + V+G V +GY+
Sbjct: 420 PVVTVNPPEEPKIGTIGPALPDVELRIDESVANQAAFDDPGEVGELLVKGPNVTEGYWDK 479
Query: 341 PSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLE 400
P AT ++ EDGW TGDI + P G + R K IVLSTG+NV P
Sbjct: 480 PGATDRSFTEDGWFKTGDIVHLRPD----------GYVEFRDRVKQLIVLSTGKNVAPGP 529
Query: 401 LEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI 444
+E+A S ++ Q +V+G D++ GA++VPD + V A++ I
Sbjct: 530 IEDAFAASEVVDQAMVVGNDEKFVGALLVPDTDHVREWAEKAGI 573
>gi|350553696|ref|ZP_08922861.1| Long-chain-fatty-acid--CoA ligase [Thiorhodospira sibirica ATCC
700588]
gi|349790080|gb|EGZ44004.1| Long-chain-fatty-acid--CoA ligase [Thiorhodospira sibirica ATCC
700588]
Length = 604
Score = 192 bits (487), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 136/397 (34%), Positives = 202/397 (50%), Gaps = 49/397 (12%)
Query: 55 TIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYE 114
T +D +AT VYTSGTTG KGVML+H NLL + + + FLS LP H E
Sbjct: 181 THSADSLATIVYTSGTTGRSKGVMLSHYNLLFNAYACTQCADIDASEVFLSFLPLSHTLE 240
Query: 115 RACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAA 172
R GY++ G E+ ++ +V+ L +DLQ +P +ISVP +YE +Y+ +Q + S
Sbjct: 241 RTAGYYMPMMLGAEVAFSRSVQQLPEDLQAIRPTVLISVPRIYERIYAKVQMGLEEKSP- 299
Query: 173 RRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLA 232
+AR L ++ T ++R R Q + + L +LWP L
Sbjct: 300 ---LARKLFSLTLD-TGWQR------FERQQGRAGWHPKL-----------LLWP---LL 335
Query: 233 EKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPT 291
++V KI + +G + VSGG LP I F+ +GV V GYG+TE+SPVI+ R
Sbjct: 336 ARIVAGKITARLGGRLQYAVSGGAPLPPPIAQFFIGLGVPVYHGYGMTEASPVISVNRTD 395
Query: 292 CNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDED 351
N+ S+G P+ E+KI G+ V R +MQGY+ N AT++ +D +
Sbjct: 396 DNIPASIGTPLPGVEVKI-----------GANDEVLTRSPCIMQGYWNNAEATREVIDAE 444
Query: 352 GWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLI 411
GWL+TGD H G L + GR K+ IVLS+GE V P ++E A L
Sbjct: 445 GWLHTGDKARYDEH----------GHLYITGRIKEIIVLSSGEKVPPADMEMAITLDPLF 494
Query: 412 RQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHAD 448
Q +V+G+ + AI+V ++E+ A+ L + D
Sbjct: 495 EQAMVVGEGKPFLSAIVVLNEEQWPAFAQSLELDPED 531
>gi|448323701|ref|ZP_21513154.1| AMP-dependent synthetase and ligase [Natronobacterium gregoryi SP2]
gi|445620837|gb|ELY74324.1| AMP-dependent synthetase and ligase [Natronobacterium gregoryi SP2]
Length = 648
Score = 192 bits (487), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 128/404 (31%), Positives = 201/404 (49%), Gaps = 55/404 (13%)
Query: 57 GSDDIATYVYTSGTTGNPKGVMLTHKNL---LHQIRSLY--------DIVPAENGDKFLS 105
G DD+A+ +YTSGTTG PKGV LTH N ++QIR D+ + +S
Sbjct: 204 GLDDLASLIYTSGTTGQPKGVELTHGNFRANVNQIRKRMAPRPDRDDDVASVDENSLTVS 263
Query: 106 MLPPWHVYERACGYFI-FSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQ 163
LP HV+ER G+F+ F+ G + Y + L++D + +P+ SVP VYE +Y I+
Sbjct: 264 YLPLAHVFERTAGHFLMFASGACVGYAEDPDTLQEDFETVEPNTATSVPRVYEKIYDAIR 323
Query: 164 KQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICA 223
+Q S+ R+ A +++ A
Sbjct: 324 EQASESAVKERIFDWATD-----------------------------VGVEYQEADTPGP 354
Query: 224 ILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESS 282
IL LA+KLV+ ++ +G + + +SGGGSL + Y A+G+ + GYGLTE++
Sbjct: 355 ILSAKQALADKLVFSTVREGLGGNLEILISGGGSLSKELCTLYHAMGLPIYEGYGLTETA 414
Query: 283 PVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVL--PAGSKGIVKVRGSQVMQGYFKN 340
PV+ P +G++G + E++I ++ N+ G G + V+G V +GY+
Sbjct: 415 PVVTVNPPEEPKIGTIGPALPDVELRIDESVANQAAFDDPGEVGELLVKGPNVTEGYWDK 474
Query: 341 PSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLE 400
P AT ++ EDGW TGDI + P G + R K IVLSTG+NV P
Sbjct: 475 PGATDRSFTEDGWFKTGDIVHLRPD----------GYVEFRDRVKQLIVLSTGKNVAPGP 524
Query: 401 LEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI 444
+E+A S ++ Q +V+G D++ GA++VPD + V A++ I
Sbjct: 525 IEDAFAASEVVDQAMVVGNDEKFVGALLVPDTDHVREWAEKAGI 568
>gi|448612502|ref|ZP_21662524.1| acyl-CoA synthetase [Haloferax mucosum ATCC BAA-1512]
gi|445741350|gb|ELZ92852.1| acyl-CoA synthetase [Haloferax mucosum ATCC BAA-1512]
Length = 667
Score = 191 bits (486), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 138/424 (32%), Positives = 209/424 (49%), Gaps = 62/424 (14%)
Query: 28 DEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQ 87
D+I+ LG R+ +++ ++ DD+A+ +YTSGTTG PKGV LTH N
Sbjct: 176 DDILTLGEVYRRGEECFDESEYESWLDSRDPDDLASLIYTSGTTGQPKGVQLTHWNFRSN 235
Query: 88 IRSLY---------DIVPAENGDKF-LSMLPPWHVYERACGYFI-FSRGIELMYT-AVRN 135
+ Y VPA N D LS LP HV+ER G+F+ F+ G + Y +
Sbjct: 236 VNESYRRFGPRPDKGDVPAINPDAVALSFLPLAHVFERMAGHFMMFAAGATVAYAESPDT 295
Query: 136 LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYE 195
L++D Q +P SVP VYE LY I+ Q S +R+ A + + AY
Sbjct: 296 LREDFQLVRPTTGTSVPRVYEKLYDAIRTQASDSPVKKRIFEWA-VGVGQAY-------- 346
Query: 196 GFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGG 254
P YL++ H LA++LV+ +++ A+G + + +SGG
Sbjct: 347 -----HTTDSPGYLLSA---------------KHRLADRLVFNQVREALGDNLEFFISGG 386
Query: 255 GSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIK----IV 310
GSL + Y A+G+ + GYGLTE+SPVI P +G++G+P+ + E+K +V
Sbjct: 387 GSLSAELCALYHAMGLPIFEGYGLTETSPVITVNPPEAPKIGTIGYPLRNVEVKLDTTVV 446
Query: 311 DAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQAL--DEDG--WLNTGDIGWIAPHH 366
+T + G G + V G V GY+ P T+ A D+DG W TGD+ + P
Sbjct: 447 GDQTGDA--GGDVGELLVHGPSVTAGYWNRPEETEAAFVEDDDGTRWFRTGDVVELRPD- 503
Query: 367 SRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGA 426
G + RAK +VLSTG+NV P +E+A S ++ Q +V+G ++ A
Sbjct: 504 ---------GYVTFRERAKQILVLSTGKNVAPGPIEDAFASSPVVEQCMVLGDGRKFVSA 554
Query: 427 IIVP 430
+IVP
Sbjct: 555 LIVP 558
>gi|335043086|ref|ZP_08536113.1| long-chain acyl-CoA synthetase [Methylophaga aminisulfidivorans MP]
gi|333789700|gb|EGL55582.1| long-chain acyl-CoA synthetase [Methylophaga aminisulfidivorans MP]
Length = 601
Score = 191 bits (485), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 127/397 (31%), Positives = 198/397 (49%), Gaps = 63/397 (15%)
Query: 58 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERAC 117
+D +AT +YTSGTTG PKGVML+H N+L + ++ D FLS LP H ER
Sbjct: 182 TDQLATIIYTSGTTGKPKGVMLSHHNILSVASASLKHFKIQSNDLFLSFLPLSHTLERTA 241
Query: 118 GYFI---------FSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFT 168
GY++ FSRGI L +D+Q+ QP +I+VP ++E +Y + + +
Sbjct: 242 GYYLPMMTGSKVAFSRGIP-------QLANDIQQLQPSALIAVPRIFERIYQRLHTNVSS 294
Query: 169 SSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPL 228
+R + +I ++Y + + R P +L+ +
Sbjct: 295 QPWYKRFLFLLTHKIGWSYFLYNQ-------QRRHWSPIFLLMPV--------------- 332
Query: 229 HLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAA 287
+KLV K +Q+ G + V+GG ++P H+ + +G+ + GYGLTE+SPVI+
Sbjct: 333 ---LDKLVAKNVQALFGGQLRVAVTGGAAIPHHVAEIFIGMGINLLQGYGLTETSPVISV 389
Query: 288 RRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQA 347
N SVGHPI +IKI AE +E+L V+ M GY+ N AT +
Sbjct: 390 NTLGDNQPYSVGHPIPTVKIKI--AENSELL---------VQSPGNMLGYWNNHKATAKT 438
Query: 348 LDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALR 407
+D DGWL+TGD I+ G + + GR KD +VLS GE V P ++E A
Sbjct: 439 IDSDGWLHTGDQAEISD----------TGHIFITGRIKDILVLSNGEKVSPADMEMAITS 488
Query: 408 SSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI 444
L Q +++G+ + A+IV + E+ L+ A++L +
Sbjct: 489 DELFEQALIVGEGKPFLSALIVLNAEQWLVLAQKLKL 525
>gi|448297936|ref|ZP_21487970.1| AMP-dependent synthetase and ligase [Natronorubrum tibetense GA33]
gi|445592662|gb|ELY46848.1| AMP-dependent synthetase and ligase [Natronorubrum tibetense GA33]
Length = 652
Score = 191 bits (485), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 146/436 (33%), Positives = 212/436 (48%), Gaps = 72/436 (16%)
Query: 24 VFSYDEIIDLGRES--RKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTH 81
+++ DE+ D G E+ +A+ DA DD+A+ +YTSGTTG PKGV LTH
Sbjct: 177 IYTLDEVYDRGEETFDLEAYQKRVDAPDL--------DDLASLIYTSGTTGQPKGVQLTH 228
Query: 82 KNLLHQIRSLY----------DIVPA-ENGDKFLSMLPPWHVYERACGYFI-FSRGIELM 129
N + ++ D VPA + + +S LP HV+ER G+F+ F+ G +
Sbjct: 229 WNFRSNVNAVRKRFAPRPDKPDDVPALDEESQAVSYLPLAHVFERTAGHFVLFATGACVA 288
Query: 130 YT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYT 188
Y + L++D QP SVP VYE +Y I++Q SS R+ A
Sbjct: 289 YAESSETLQEDFSLVQPTTATSVPRVYEKIYDAIREQASESSVKERIFEWATD------- 341
Query: 189 AFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS- 247
+++ A IL LA+KLV+ ++ A+G
Sbjct: 342 ----------------------VGVEYQRADSPGPILNAKRSLADKLVFSTVREALGGEI 379
Query: 248 KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEI 307
+ +SGGGSL + Y A+G+ + GYGLTE+SPV+ P +G++G + ++
Sbjct: 380 ELLISGGGSLSPELCQLYHAMGLPIYEGYGLTETSPVVTTNPPEAVKIGTIGPALPGVDL 439
Query: 308 KI----VDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQAL--DEDG--WLNTGDI 359
+I VD ET P G G + V+G V QGY+ P AT+ A DEDG W TGDI
Sbjct: 440 RIDETVVDQETFTDDP-GEVGELLVKGPNVTQGYWNKPGATRSAFTEDEDGDRWFRTGDI 498
Query: 360 GWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQ 419
+ P G L RAK IVLSTG+NV P LE+A S +I Q +V+G
Sbjct: 499 VHLRPD----------GYLEFRDRAKQIIVLSTGKNVAPGPLEDAFAASEIIEQAMVVGD 548
Query: 420 DQRRPGAIIVPDKEEV 435
++ GA++VP+ E V
Sbjct: 549 GEKFIGALLVPNTEHV 564
>gi|448577228|ref|ZP_21642858.1| acyl-CoA synthetase [Haloferax larsenii JCM 13917]
gi|445727873|gb|ELZ79482.1| acyl-CoA synthetase [Haloferax larsenii JCM 13917]
Length = 667
Score = 191 bits (485), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 138/423 (32%), Positives = 207/423 (48%), Gaps = 60/423 (14%)
Query: 28 DEIIDLGRESRKAFSDSNDARKHYKY-ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLH 86
D+I+ LG R+ D D + + + +D+A+ +YTSGTTG PKGV L+H N
Sbjct: 176 DDILTLGELYRRG-EDVFDEETYESWLDARDPEDLASLIYTSGTTGQPKGVKLSHWNFRS 234
Query: 87 QIRSLY---------DIVPAENGDKF-LSMLPPWHVYERACGYFI-FSRGIELMYT-AVR 134
+ Y D P + D LS LP HV+ER G+F+ F+ G + Y +
Sbjct: 235 NVNESYRRFGPHPGRDDAPFISSDAVALSFLPLAHVFERMAGHFMMFAAGATVAYAESPD 294
Query: 135 NLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIY 194
L+DD Q QP SVP VYE LY I+ Q S +R+ A + + Y
Sbjct: 295 TLRDDFQLVQPTTGTSVPRVYEKLYDAIRTQASESPLKKRIFEWA-VGVGKEY------- 346
Query: 195 EGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSG 253
+ P YL+ L H LA++LV+++++ A+G + + +SG
Sbjct: 347 ------HTSEAPGYLLEL---------------KHQLADRLVFEQVRDALGGNMEFFISG 385
Query: 254 GGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAE 313
GGSL + Y +G+ + GYGLTE+SPVI+ P +G++G+P+ + E+K+
Sbjct: 386 GGSLSAELCALYHGMGLPIFEGYGLTETSPVISVNPPEEPKIGTIGYPLRNVEVKLDKTV 445
Query: 314 TNEVL--PAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDG----WLNTGDIGWIAPHHS 367
+ L G G + VRG V +GY+ P T+ A +ED W TGDI
Sbjct: 446 VGDTLGDAGGDIGELLVRGPSVTEGYWNRPEETESAFEEDDDGNRWFRTGDI-------- 497
Query: 368 RGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAI 427
R G L RAK +VLSTG+NV P +E+A S ++ Q +V+G ++ A+
Sbjct: 498 --VEHRPDGYLAFRERAKQIMVLSTGKNVAPGPIEDAFASSDVVEQCMVLGDGRKFVSAL 555
Query: 428 IVP 430
IVP
Sbjct: 556 IVP 558
>gi|422348826|ref|ZP_16429718.1| hypothetical protein HMPREF9465_00608 [Sutterella wadsworthensis
2_1_59BFAA]
gi|404658878|gb|EKB31740.1| hypothetical protein HMPREF9465_00608 [Sutterella wadsworthensis
2_1_59BFAA]
Length = 609
Score = 191 bits (485), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 126/398 (31%), Positives = 193/398 (48%), Gaps = 43/398 (10%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 118
DD+A VYTSGTTG PKGVMLTH N++ +++ + V + GD FLS LP H +ER G
Sbjct: 185 DDLAGIVYTSGTTGRPKGVMLTHGNIVSNVKATLECVFPQVGDIFLSFLPLSHTFERTAG 244
Query: 119 YFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 176
Y++ + G + Y +V L DDL+ +P +ISVP VYE +++ + ++ S A R +
Sbjct: 245 YYLALATGCTIAYNRSVLLLADDLKTIRPTVIISVPRVYERIFARVHDKLKKSRPAARYL 304
Query: 177 ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLV 236
+ I + FC + A +D L + L K+
Sbjct: 305 FDWAVEIG---------WRDFCRRNHLPVEHTGRAWLDGL-----------MRPLVRKVS 344
Query: 237 YKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLG 296
+ G + +SGG +L + + +G+ + GYG+TE+SP+IA T N
Sbjct: 345 STLLDQFGGRLRIAISGGAALSSKVARTFCGLGLPIIQGYGMTEASPIIAGNNRTLNQPN 404
Query: 297 SVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNT 356
+VG P N+ E+++ G ++++G + +GY+ P AT A EDGW T
Sbjct: 405 TVGKPFNNVEVRL-----------GEGDEIQIKGPSITRGYWNRPDATADAFTEDGWFRT 453
Query: 357 GDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVV 416
GD+G G+L ++GR K+ IV STGE V P +LE A L Q V
Sbjct: 454 GDVGGFNEL----------GLLSIKGRIKEIIVTSTGEKVPPADLEAAIETDPLFSQCYV 503
Query: 417 IGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK 454
IG+++ I V + +E AK + AD + L
Sbjct: 504 IGENRPYLSLITVVNPDEWASFAKSCGVDPADPASLDN 541
>gi|193212756|ref|YP_001998709.1| AMP-dependent synthetase and ligase [Chlorobaculum parvum NCIB
8327]
gi|193086233|gb|ACF11509.1| AMP-dependent synthetase and ligase [Chlorobaculum parvum NCIB
8327]
Length = 609
Score = 191 bits (484), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 130/438 (29%), Positives = 218/438 (49%), Gaps = 53/438 (12%)
Query: 57 GSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERA 116
G DD+AT +YTSGTTG PKGVMLTH+NL ++S ++ + D LS LP H YER
Sbjct: 181 GPDDVATIIYTSGTTGLPKGVMLTHRNLCENVKSCSTVIRLDETDSSLSFLPLSHAYERT 240
Query: 117 CGYFI-FSRGIEL-MYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARR 174
GY++ F+ G + + ++ + ++ +P + +VP +++ + + + K + +
Sbjct: 241 GGYYLMFACGARIYLAESIETISLNIMEAKPTIIFTVPRLFDRMKANMLKAVAKEGGLKE 300
Query: 175 VVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEK 234
+ + Y ++ EG + I+ H LA+K
Sbjct: 301 KIFYWAVSTGEKY--HNQLAEG-----------------------KVSPIVNVQHKLADK 335
Query: 235 LVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCN 293
LVY K++ G + VSGG +LP F+++IG+ + G+GLTE+SPV RP
Sbjct: 336 LVYHKLREKFGGRLRYFVSGGAALPQKTGEFFQSIGITILEGFGLTETSPVTNVNRPENV 395
Query: 294 VLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGW 353
G+VG P+ + E++I A+ E+L ++G +M+GY+K+ AT + + +DGW
Sbjct: 396 KFGTVGPPVKNVEVRI--AQDGEIL---------LKGPNIMKGYWKDDEATAEVI-KDGW 443
Query: 354 LNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQ 413
TGDIG I G L + R K IV S G+N+ PL +E L S + Q
Sbjct: 444 FYTGDIGEI----------DADGYLKITDRKKHIIVTSGGKNIAPLPIENLILESPYVDQ 493
Query: 414 IVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSK-- 471
+V+G+ + A+IVPD +++ A I EL + K + +Y +L + S+
Sbjct: 494 TMVVGEKRPFLIALIVPDFQKLSEFASEHQITAGSNKELIEAKEVIKVYEQLLRTVSRQL 553
Query: 472 -CSFQIGPIHVVDEPFTV 488
++ +V+E F++
Sbjct: 554 ATHEKVRKFLLVEEAFSI 571
>gi|313205365|ref|YP_004044022.1| amp-dependent synthetase and ligase [Paludibacter propionicigenes
WB4]
gi|312444681|gb|ADQ81037.1| AMP-dependent synthetase and ligase [Paludibacter propionicigenes
WB4]
Length = 587
Score = 191 bits (484), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 134/409 (32%), Positives = 209/409 (51%), Gaps = 63/409 (15%)
Query: 28 DEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQ 87
D++I LG+E+R+ D K +I DD+AT +YTSGTTG+ KGVML+H+N++ Q
Sbjct: 148 DQLITLGKENRQP-----DKLIQLK-ASIKPDDLATIIYTSGTTGSQKGVMLSHQNIVSQ 201
Query: 88 IRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYT-AVRNLKDDLQRYQPH 146
++SL + +PA+ +K LS LP H YER Y G+ + Y ++ + ++++ P
Sbjct: 202 LKSL-ESIPAKWSNKALSFLPLCHAYERMLVYLYQYLGMSVYYAESLGTIAENIKEINPT 260
Query: 147 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAY-TAFKRIYEGFCLTRNQKQ 205
M VP + E +Y +++ S ++ + +F T F+ G+ K
Sbjct: 261 MMSCVPRLLEKIYD----KLYLSGKKLPFFSKIIYYWAFNLATKFQLEEMGWYYNIKYK- 315
Query: 206 PSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLF 264
LAEKL+Y K ++AIG + VSGG ++ HI F
Sbjct: 316 -------------------------LAEKLIYSKWRAAIGGNFDIVVSGGSAIQPHIASF 350
Query: 265 YEAIGVKVQVGYGLTESSPVIAA--RRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGS 322
+ AIG+ V GYGL+E+SPVIA R G+VG P+ E+K+ AE +E++
Sbjct: 351 FSAIGMPVFEGYGLSETSPVIAVSQRGENGRKFGTVGLPLQGVEVKL--AERDEII---- 404
Query: 323 KGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEG 382
RG VM GY+K+P+ T QA+D DGW +TGD G P G L++ G
Sbjct: 405 -----CRGHNVMLGYYKDPALTAQAIDNDGWFHTGDTGKFTPE----------GQLIITG 449
Query: 383 RAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPD 431
R K S G+ V P +E S+ I ++V+G++++ A++ PD
Sbjct: 450 RLKSIFKTSFGKYVNPQAIESRFTESAFIENMIVLGENKKFAAALLSPD 498
>gi|448383967|ref|ZP_21562965.1| AMP-dependent synthetase and ligase [Haloterrigena thermotolerans
DSM 11522]
gi|445658956|gb|ELZ11768.1| AMP-dependent synthetase and ligase [Haloterrigena thermotolerans
DSM 11522]
Length = 652
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 136/405 (33%), Positives = 205/405 (50%), Gaps = 60/405 (14%)
Query: 52 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI---RSLYDIVPAENGDK------ 102
+ + I DD+A+ +YTSGTTG PKGV LTH N + R + P ++ D
Sbjct: 199 RIDGIDLDDLASLIYTSGTTGKPKGVQLTHWNFRSNVNGSRKRFGPRPDKDDDVPVLDEE 258
Query: 103 --FLSMLPPWHVYERACGYF-IFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETL 158
+S LP HV+ER G+F +F+ G + Y + L++D QP SVP VYE +
Sbjct: 259 SVAMSYLPLAHVFERTAGHFALFAGGTCIAYAESPDTLQEDFSTVQPTTATSVPRVYEKI 318
Query: 159 YSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWA 218
Y GI+++ SS +RR+ A + AY + + P
Sbjct: 319 YDGIREEASGSSVSRRIFEWA-TDVGVAY-------------QQAESPG----------- 353
Query: 219 RIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYG 277
AIL LA+KLV+ ++ A+G + + +SGGGSL + Y A+G+ + GYG
Sbjct: 354 ----AILKAKQALADKLVFSTVREALGGNIEILISGGGSLSPELCRLYHAMGLPIFEGYG 409
Query: 278 LTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNE---VLPAGSKGIVKVRGSQVM 334
LTE+SP++A P +G++G +++ E+K+ +A ++ AG G + V G V
Sbjct: 410 LTETSPIVATNPPEGAKIGTIGPTLSNVEVKVDEAIADQDAFTDDAGEVGELLVNGPNVT 469
Query: 335 QGYFKNPSATKQAL--DEDG--WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVL 390
QGY+ P AT+ A D+DG W TGDI + P G L R K IVL
Sbjct: 470 QGYWNKPGATEGAFTEDDDGTRWFRTGDIIHVRPD----------GYLEFRDRVKQIIVL 519
Query: 391 STGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 435
STG+NV P LE+A S ++ Q +V+G ++ GA++VP+ V
Sbjct: 520 STGKNVAPGPLEDAFAASEVVEQAMVVGDGEKFIGALLVPNTNHV 564
>gi|402831321|ref|ZP_10880009.1| AMP-binding enzyme [Capnocytophaga sp. CM59]
gi|402282505|gb|EJU31045.1| AMP-binding enzyme [Capnocytophaga sp. CM59]
Length = 597
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 137/448 (30%), Positives = 226/448 (50%), Gaps = 60/448 (13%)
Query: 52 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWH 111
++++ D+ T +YTSGTTGNPKGVM+ ++N+ +Q + D + G+ +S LP H
Sbjct: 172 RFDSRCMQDLYTIIYTSGTTGNPKGVMIDYENVAYQFINHDDRLAVVEGNVSMSFLPLSH 231
Query: 112 VYERACGYFIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSS 170
VYER ++F +G+ Y N + + L+ +PHYM VP + E +Y+ I + + S
Sbjct: 232 VYERMWVAYVFHKGVINCYLDDTNRVAEALKEVKPHYMCVVPRLLEKIYTKIYENVQKQS 291
Query: 171 AARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHL 230
+RVV RI+ +I G T+ K PS+ IL L+
Sbjct: 292 VVKRVVFATATRIA-------KIQLG--RTKKGKYPSF---------------ILKKLYN 327
Query: 231 LAEKLVYKKIQSAIGISKAGVSGGGS-LPMHIDLFYEAIGVKVQVGYGLTESSPVIAARR 289
LA+KLV++K+++A+G + + GG+ L I F+ AIGV V +GYG+TE++ ++
Sbjct: 328 LADKLVFQKLKAALGGNIQMIPCGGALLEPSIGRFFRAIGVNVTLGYGMTETTATVSCWD 387
Query: 290 PTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALD 349
L SVG + + + KI + NE+L ++G + +GY+ NP +A
Sbjct: 388 DHKFKLKSVGTLVPYVQAKI--GQDNEIL---------LKGGSISKGYYNNPEENAKAFT 436
Query: 350 EDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSS 409
EDG+L TGD G++ G L + R K+ + S G+ + P ++E + S
Sbjct: 437 EDGYLRTGDAGYLDKE----------GNLYITERIKELMKTSNGKYIAPQQIEGKVGKDS 486
Query: 410 LIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLL 461
I QI VI ++ A+IVP+ E + AK L++ + + SEL K +K + L
Sbjct: 487 FIEQIAVIADARKYVSALIVPNYEALAEYAKSLNLKYKNYSELIKNSQIVEFFQKRLQHL 546
Query: 462 YGELRKWTSKCSFQIGPIHVVDEPFTVN 489
EL + QI ++ PF++N
Sbjct: 547 QQELAAYE-----QIKKFTLLTTPFSIN 569
>gi|345428592|ref|YP_004821708.1| hypothetical protein PARA_00020 [Haemophilus parainfluenzae T3T1]
gi|301154651|emb|CBW14110.1| unnamed protein product [Haemophilus parainfluenzae T3T1]
Length = 605
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 148/475 (31%), Positives = 230/475 (48%), Gaps = 69/475 (14%)
Query: 27 YDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLH 86
+DE+I LG +A ++ A K DD+ T +YTSGTTG PKGVML + NL H
Sbjct: 152 WDELIQLGAAEFQAEFETRLANK-------TMDDLFTIIYTSGTTGEPKGVMLDYNNLAH 204
Query: 87 QIRSLYDIVPAENGDKF-LSMLPPWHVYERACGYFIFSRGIELMYTAVRN-LKDDLQRYQ 144
Q+ + +DI N D+ LS LP H++ERA ++ RG L Y N +++ L +
Sbjct: 205 QLEA-HDIALDVNQDEVSLSFLPFSHIFERAWVAYVLHRGAILCYLEDTNQVRETLTEVR 263
Query: 145 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQK 204
P +M +VP YE +YS + ++ + R+++ +A ++ +E L++N+K
Sbjct: 264 PTFMCAVPRFYEKIYSAVLDKVQKAPFIRQMI------FHWAIAVGQKRFE--LLSQNKK 315
Query: 205 QPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDL 263
P + L + LA+KLV K++S +G K GG L I L
Sbjct: 316 VPFF----------------LQKRYALADKLVLSKLRSLLGGRIKMMPCGGAKLEPTIGL 359
Query: 264 FYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSK 323
F+ +IG+ +++GYG+TE++ I+ S+G + + E+KI E NE+L
Sbjct: 360 FFHSIGINIKLGYGMTETTATISCWDDHHFNPNSIGKLMPNAEVKI--GENNEIL----- 412
Query: 324 GIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGR 383
VRG VM+GY+K P T QA EDG+L TGD G G L + R
Sbjct: 413 ----VRGGMVMKGYYKKPEETAQAFTEDGFLKTGDAGEFDAE----------GNLFITDR 458
Query: 384 AKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLS 443
K+ + S G+ + P +E + I QI +I ++ A+IVP + V AK+L+
Sbjct: 459 IKELMKTSNGKYIAPQYIEGKIGKDKFIEQIAIIADAKKYVSALIVPCFDSVEEYAKKLN 518
Query: 444 IVHADASELSK--------EKTISLLYGELRKWTSKCSFQIGPIHVVDEPFTVNF 490
I + D EL K EK I L EL + Q+ ++ + F+V
Sbjct: 519 IKYQDRMELLKHSEIIKMFEKRIESLQKELAHFE-----QVKKFTLLSQAFSVKL 568
>gi|78186834|ref|YP_374877.1| long-chain fatty-acid-CoA ligase [Chlorobium luteolum DSM 273]
gi|78166736|gb|ABB23834.1| long-chain fatty-acid-CoA ligase [Chlorobium luteolum DSM 273]
Length = 610
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 134/440 (30%), Positives = 224/440 (50%), Gaps = 54/440 (12%)
Query: 56 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYER 115
+ DD+AT +YTSGTTG PKGVMLTH+NL ++S +I+ + D LS LP H YER
Sbjct: 180 VDPDDVATIIYTSGTTGLPKGVMLTHRNLCENVKSAAEIIRIDETDCSLSFLPLSHAYER 239
Query: 116 ACGYFI-FSRGIEL-MYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 173
GY++ F+ G + + ++ + ++ +P + +VP +++ + + +QKQI T S +
Sbjct: 240 TGGYYLLFACGASIYLAESIETVSLNITEARPTIIFTVPRLFDRIRTNMQKQISTESPLK 299
Query: 174 -RVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLA 232
++ A+ R + + ++ + S L+ L H +A
Sbjct: 300 QKIFNWAVSRGEHYHRSIEK----------KGSASPLLTL---------------QHAVA 334
Query: 233 EKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPT 291
KLVY+K++ G + VSGG +LP F++A+G+ + G+GLTE+SP+ RP
Sbjct: 335 GKLVYQKVKKRFGGRLRYFVSGGAALPQKTGEFFQALGITILEGFGLTETSPITNVNRPE 394
Query: 292 CNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDED 351
G+VG + + E+KI AE EVL RG +M+GY+++ AT + + D
Sbjct: 395 KVKFGTVGPTVANVEMKI--AEDGEVL---------FRGPNIMKGYWQDREATAEVI-RD 442
Query: 352 GWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLI 411
GW ++GDIG I G L + R K IV S G+N+ P+ +E + +
Sbjct: 443 GWFHSGDIGEI----------DGDGYLKITDRKKHIIVTSGGKNIAPMPIENLIAENPYV 492
Query: 412 RQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSK 471
Q++V+G+ + A+IVPD +++ A I D + L K I +Y +L + S+
Sbjct: 493 DQVMVVGEKRPFLIALIVPDFQKLREFAASAGITAPDDAGLCAHKEIVQIYEKLLRSISR 552
Query: 472 ---CSFQIGPIHVVDEPFTV 488
++ + EPFT+
Sbjct: 553 QLATHEKVRRFILAKEPFTI 572
>gi|322419627|ref|YP_004198850.1| AMP-dependent synthetase and ligase [Geobacter sp. M18]
gi|320126014|gb|ADW13574.1| AMP-dependent synthetase and ligase [Geobacter sp. M18]
Length = 603
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 133/413 (32%), Positives = 207/413 (50%), Gaps = 51/413 (12%)
Query: 54 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI-RSLYDIVPAENGDKFLSMLPPWHV 112
+ I + + T +YTSGTTG PKGVML+H+N+L + ++ E G+ FLS LP HV
Sbjct: 176 DAIDPESLMTIIYTSGTTGTPKGVMLSHQNILFDVCATIRKAKVLEEGEVFLSFLPLSHV 235
Query: 113 YERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSS 170
ER+ GY++ +RG + + ++ + +++ QP M+ VP ++E ++S I + + S
Sbjct: 236 LERSTGYYLPVARGAMIAFADSIEKIAENMLEVQPTVMVCVPRLFEKIHSRIHEYVHELS 295
Query: 171 AARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHL 230
+R + + ++ I Y + I K+ +L+AL H
Sbjct: 296 LYKRKLFKTVLSIGRRYVYARYI---------DKKVPFLLAL---------------QHA 331
Query: 231 LAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARR 289
+A++LV+KK++ G + K GG L I+ F+ +IGV + GYGLTE+SPV+
Sbjct: 332 VADRLVFKKLRRRFGDNLKFCSCGGAPLDREINEFFWSIGVPILEGYGLTETSPVLCNNT 391
Query: 290 PTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALD 349
GSVG P+ TE I AG G + VRG QVM GY+K+ ATK+A
Sbjct: 392 FDKLRFGSVGTPLESTEFTI----------AGD-GEILVRGPQVMLGYYKDEEATKEAF- 439
Query: 350 EDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSS 409
DGW TGDIG R LV+ R KD IV + G+N+ P +E R
Sbjct: 440 RDGWFKTGDIG-----------RLEDDFLVITDRKKDLIVTAAGKNIAPQPIENLLKRDK 488
Query: 410 LIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLY 462
+ Q V G + A++VP E++L A+ + + D +L + + LY
Sbjct: 489 YVSQAYVYGDRKPYLTALLVPTLEKLLEFAREKQLTYTDLEDLVVHEPVLELY 541
>gi|398345391|ref|ZP_10530094.1| long-chain-fatty-acid--CoA ligase [Leptospira inadai serovar Lyme
str. 10]
Length = 645
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 132/420 (31%), Positives = 207/420 (49%), Gaps = 24/420 (5%)
Query: 54 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 113
E++ DIAT +YTSGTTG PKGV+L H++ ++ L VP D+ + LPPWH+
Sbjct: 189 ESLTGKDIATIIYTSGTTGVPKGVVLKHRSFTWSVQELQQFVPVTYSDRTVVFLPPWHIA 248
Query: 114 ERACGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 173
ER + S G + + V NL+ D QP ++SVP V+E LY I + +
Sbjct: 249 ERILETALLSWGASMASSNVTNLQRDFGLIQPTVLVSVPRVWEALYRKIWDTAKKGPSWK 308
Query: 174 RVVARALIRIS-FAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPL---H 229
V ++I+ F + + I + T + +PS AL + + A P+ +
Sbjct: 309 FKVFSLAVKIAEFHSSLYDTITGNYATTED--EPSDQKALDKF----VALAFFGPVSLAN 362
Query: 230 LLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARR 289
LL++K++ S G + G G++P I F+ ++G+ + YG+TE++ + A R
Sbjct: 363 LLSQKILQPVRASLGGRLRFAFCGAGAMPSKIQFFFRSLGIPIIETYGMTETTGMGAMGR 422
Query: 290 PTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALD 349
G++G IK++D + +G KG +G V GY+K+ +L
Sbjct: 423 FPIPKTGAIGPVFPGAHIKLLDETGTVITESGIKGTAWHKGPHVTSGYYKDEEKNTASLI 482
Query: 350 EDGWLNTGDIG-WIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRS 408
D W ++GD+ W G L GRAKDTIVLS+GENVEP +E S
Sbjct: 483 -DNWFDSGDLFVWTKT-----------GELKFAGRAKDTIVLSSGENVEPEPIEAKISES 530
Query: 409 SLIRQIVVIGQDQRRPGAIIVPDKEEVLMA-AKRLSIVHADASELSKEKTISLLYGELRK 467
I+ IVV+GQD++ A+IVP+ E++ AK + +E+ T+ Y EL K
Sbjct: 531 EFIQFIVVVGQDRKFLNALIVPNFEKLREKFAKSGQTLPEANTEIVTNPTVLKFYKELLK 590
>gi|325577823|ref|ZP_08148098.1| long-chain-fatty-acid--CoA ligase [Haemophilus parainfluenzae ATCC
33392]
gi|325160568|gb|EGC72694.1| long-chain-fatty-acid--CoA ligase [Haemophilus parainfluenzae ATCC
33392]
Length = 605
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 138/441 (31%), Positives = 220/441 (49%), Gaps = 56/441 (12%)
Query: 27 YDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLH 86
+D++I LG +A ++ A K DD+ T +YTSGTTG PKGVML + NL H
Sbjct: 152 WDDLIQLGTAEFQAEFETRLANK-------AMDDLFTIIYTSGTTGEPKGVMLDYSNLAH 204
Query: 87 QIRSLYDIVPAENGDKF-LSMLPPWHVYERACGYFIFSRGIELMYTAVRN-LKDDLQRYQ 144
Q+ + +DI N D+ LS LP H++ERA ++ RG L Y N +++ L +
Sbjct: 205 QLEA-HDIALDVNQDEVSLSFLPFSHIFERAWVAYVLHRGAILCYLEDTNQVREALTEVR 263
Query: 145 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQK 204
P +M +VP YE +YS + ++ + R+++ +A ++ ++ L++N+K
Sbjct: 264 PTFMCAVPRFYEKIYSAVLDKVQKAPFIRQMI------FHWAIAVGQKRFD--LLSQNKK 315
Query: 205 QPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDL 263
P + L + LA+KLV K++S +G K GG L I L
Sbjct: 316 VPFF----------------LQKRYALADKLVLSKLRSLLGGRIKMMPCGGAKLEPTISL 359
Query: 264 FYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSK 323
F+ +IG+ +++GYG+TE++ ++ S+G + + E+KI E NE+L
Sbjct: 360 FFHSIGINIKLGYGMTETTATVSCWDDHHFNPSSIGKLMPNAEVKI--GENNEIL----- 412
Query: 324 GIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGR 383
VRGS VM+GY+K P T QA EDG+L TGD G G L + R
Sbjct: 413 ----VRGSMVMKGYYKKPEETAQAFTEDGFLKTGDAGEFDAE----------GNLFITDR 458
Query: 384 AKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLS 443
K+ + S G+ + P +E + I QI +I ++ A+IVP + V AK+L+
Sbjct: 459 IKELMKTSNGKYIAPQYIEGKIGKDKFIEQIAIIADAKKYVSALIVPCFDSVEEYAKKLN 518
Query: 444 IVHADASELSKEKTISLLYGE 464
I + D EL K I ++ +
Sbjct: 519 IKYQDRMELLKHSEIIKMFEQ 539
>gi|289207858|ref|YP_003459924.1| AMP-dependent synthetase and ligase [Thioalkalivibrio sp. K90mix]
gi|288943489|gb|ADC71188.1| AMP-dependent synthetase and ligase [Thioalkalivibrio sp. K90mix]
Length = 602
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 125/386 (32%), Positives = 198/386 (51%), Gaps = 49/386 (12%)
Query: 51 YKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPW 110
+ + + + +AT VYTSGTTG PKGV+L+H+N+L + P D+FLS LP
Sbjct: 173 FHHPDLDPEAMATIVYTSGTTGRPKGVILSHRNILENAWASSQAGPLSPADRFLSFLPLS 232
Query: 111 HVYERACG-YFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFT 168
H+ ER G Y G E+ + +++ L +DL +P +ISVP +YE ++ IQ +
Sbjct: 233 HMLERTAGLYMPMLIGAEVAFARSIQALGEDLVNVRPTVLISVPRIYERVHGRIQAGLKQ 292
Query: 169 SSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPL 228
S R + +A + I + ++ G+ P +L LWP
Sbjct: 293 KSGLGRALFKATVSIGWKRFEHQQGRGGWS-------PGFL---------------LWP- 329
Query: 229 HLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAA 287
+ E++V +K+ +G + V GG LP I F+ +G+ V GYG+TE+SPV+
Sbjct: 330 --VLERIVARKVLDRLGGELRFAVCGGAPLPPPIAQFFIGLGLPVLHGYGMTEASPVVTV 387
Query: 288 RRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQA 347
P N+ S+G P+ EI+I E +E+L R VM GY+KN AT++
Sbjct: 388 NTPDDNLPASIGKPLPGVEIRI--GEMDELL---------TRSPCVMLGYWKNEEATRET 436
Query: 348 LDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALR 407
+DEDGWL++GD + R G V + GR KD +VL+ GE V P ++E A
Sbjct: 437 IDEDGWLHSGD---------QARIDDSGHVFIT-GRIKDILVLTNGEKVPPADMEMAIAL 486
Query: 408 SSLIRQIVVIGQDQRRPGAIIVPDKE 433
+L Q++++G ++ A++VP+ E
Sbjct: 487 DALFDQVMIVGDNRSFLTALVVPEPE 512
>gi|381162311|ref|ZP_09871541.1| AMP-forming long-chain acyl-CoA synthetase [Saccharomonospora
azurea NA-128]
gi|379254216|gb|EHY88142.1| AMP-forming long-chain acyl-CoA synthetase [Saccharomonospora
azurea NA-128]
Length = 598
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 132/412 (32%), Positives = 204/412 (49%), Gaps = 60/412 (14%)
Query: 26 SYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLL 85
+ D + +LG +D D H + + + +DD+AT VYTSGTTG PKGV+LTH+NLL
Sbjct: 154 AVDRLTELG-------ADVADDEVHTRRKAVQADDMATIVYTSGTTGRPKGVVLTHRNLL 206
Query: 86 HQIRSLYDIVPA--ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQR 142
++R+ P G+ L LP H+ RA + + L +TA ++ L +DL
Sbjct: 207 AEVRADIKAFPKLMGAGNSLLLFLPLAHILARAIAITAITSRVTLGHTADIKELVNDLGT 266
Query: 143 YQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRN 202
++P ++++VP V+E +Y+G + + T + + A + + +
Sbjct: 267 FRPTFVVAVPRVFEKVYNGAKLKAHTGGKGK------------IFDAAEATAVAYSQALD 314
Query: 203 QKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIG-ISKAGVSGGGSLPMHI 261
PS+ + + H + KLVY K+Q+A+G A VSGG L +
Sbjct: 315 TGGPSFGLRV---------------KHAVFSKLVYSKLQAALGGRCVAAVSGGAPLGARL 359
Query: 262 DLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAG 321
F+ IGV V GYGLTE+S +G+VG P+ T ++I AE EVL
Sbjct: 360 AHFFRGIGVPVFEGYGLTETSAAANVNTEDAFKVGTVGKPVAGTSVRI--AEDGEVL--- 414
Query: 322 SKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLE 381
++G V Y+ NP AT+++L EDGW +TGDIG + G L +
Sbjct: 415 ------LKGDVVFTRYWNNPEATRESL-EDGWFHTGDIGEL----------DADGFLKIT 457
Query: 382 GRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 433
GR K+ IV + G+NV P LE+A LI Q +V+G + GA++ D+E
Sbjct: 458 GRKKEIIVTAGGKNVAPSGLEDALKADPLISQAMVVGDQRPFIGALVTIDEE 509
>gi|448725783|ref|ZP_21708221.1| AMP-dependent synthetase and ligase [Halococcus morrhuae DSM 1307]
gi|445797647|gb|EMA48109.1| AMP-dependent synthetase and ligase [Halococcus morrhuae DSM 1307]
Length = 653
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 138/430 (32%), Positives = 216/430 (50%), Gaps = 70/430 (16%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNL---LHQIRSLYDIVPAENGD--------KFLSML 107
DD+A+ +YTSGTTG PKGV ++H+N ++Q+R + P ++ D LS L
Sbjct: 207 DDLASLIYTSGTTGKPKGVKMSHRNFRANINQLRKRFGDRPDKSADLPSVGRETVALSFL 266
Query: 108 PPWHVYERACG-YFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQ 165
P HV+ER G +F+F+ G + Y + + +D+Q QP SVP +YE ++ +++
Sbjct: 267 PLAHVFERLAGHFFLFASGATVAYAESADTVAEDIQTVQPTTATSVPRIYERIFDSMRED 326
Query: 166 IFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAIL 225
S+ RR+ RA+ A KR T Q P + R+ A
Sbjct: 327 A-DSAIKRRIFERAV-------AAAKR-------TSRQDDPGRTL--------RVERA-- 361
Query: 226 WPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPV 284
LA++LVY ++ A+G + + +SGGGSL + ++ +G+ + GYGLTE++PV
Sbjct: 362 -----LADRLVYSTVKEAMGGNIEFFISGGGSLSPELARLFDGMGLPIYEGYGLTEAAPV 416
Query: 285 IAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA------GSKGIVKVRGSQVMQGYF 338
++ P G++G + E K+ DA VLPA G+ G + VRG V GY+
Sbjct: 417 VSVNPPEAPKPGTLGPALTGVETKL-DAS---VLPADQYDRDGTVGELLVRGPNVTDGYW 472
Query: 339 KNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 398
+NP T A ++DGWL TGDI R G V R K +VL+TG+NV P
Sbjct: 473 ENPEETDAAFEDDGWLRTGDI----------VERDGDGYFVYHERLKQLLVLTTGKNVAP 522
Query: 399 LELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTI 458
+E++ S + Q +V+G D++ A++VP+ E + A R +I EL E+
Sbjct: 523 GPIEDSFATSERVEQAMVLGDDEKFVSALVVPNFEGLRAWAARKNI------ELPSERAA 576
Query: 459 SLLYGELRKW 468
R+W
Sbjct: 577 LCRDENAREW 586
>gi|302879073|ref|YP_003847637.1| AMP-dependent synthetase and ligase [Gallionella capsiferriformans
ES-2]
gi|302581862|gb|ADL55873.1| AMP-dependent synthetase and ligase [Gallionella capsiferriformans
ES-2]
Length = 595
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 117/364 (32%), Positives = 185/364 (50%), Gaps = 49/364 (13%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 118
D++A+ +YTSGTTG P+GVML+H N+L R+ D + D FLS LP H +ER G
Sbjct: 176 DELASIIYTSGTTGKPRGVMLSHGNMLSNARACLDTFSVRSEDVFLSFLPLSHTFERTLG 235
Query: 119 YF--IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 176
Y+ + + +++ L +D+Q +P +ISVP +YE +Y+ I+ ++ +R +
Sbjct: 236 YYLTVMTGATVAFARSIQTLSEDMQVIRPTLLISVPRIYERIYAVIRAKLEDGPRFKRRL 295
Query: 177 ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLV 236
+ +A ++ R + S+L LWP + +KLV
Sbjct: 296 FYLAVETGWAMFEHQQ-------GRGPWRASFL---------------LWP---VLQKLV 330
Query: 237 YKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVL 295
+K+ +G + +SGG +L + +G+ + GYGLTE+SPVI+ N
Sbjct: 331 AQKVLDKLGGRLRVAISGGAALAAEFSRVFVGLGLPIVQGYGLTETSPVISGNHLGNNFP 390
Query: 296 GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLN 355
SVG PI+ E+++ G+ ++VRG VM GY+ NP AT+ L DGWL
Sbjct: 391 DSVGQPISGVEVRL-----------GALSELQVRGPNVMLGYWNNPEATRATLAADGWLR 439
Query: 356 TGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIV 415
TGDIG I+ G + + GR K+ IV+S GE + P ++E A L L Q++
Sbjct: 440 TGDIGHISDT----------GHIYITGRIKEIIVMSNGEKIPPTDMELAILHDPLFEQVM 489
Query: 416 VIGQ 419
V G+
Sbjct: 490 VFGE 493
>gi|256375521|ref|YP_003099181.1| AMP-dependent synthetase and ligase [Actinosynnema mirum DSM 43827]
gi|255919824|gb|ACU35335.1| AMP-dependent synthetase and ligase [Actinosynnema mirum DSM 43827]
Length = 602
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 136/412 (33%), Positives = 201/412 (48%), Gaps = 60/412 (14%)
Query: 26 SYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLL 85
+ DE+ LG E +D H + G+DD+AT VYTSGTTG PKG LTH+NLL
Sbjct: 158 AVDELTALGAEV-------SDEDAHARRRVAGADDVATIVYTSGTTGKPKGCELTHRNLL 210
Query: 86 HQIRSLYDIVP--AENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQR 142
+IR ++P + G+ L LP H+ R + + +T VR L +DL
Sbjct: 211 SEIREAVTLMPHLLQAGNTLLVFLPLAHILARVLALCALYTRVTVGHTQDVRKLVEDLGT 270
Query: 143 YQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRN 202
++P ++++VP V+E +Y+G KQ + ++ A A TA + +
Sbjct: 271 FRPTFVVAVPRVFEKVYNG-AKQKAEAEGKGKIFAIA------EATAVE-----YSRAEE 318
Query: 203 QKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIG-ISKAGVSGGGSLPMHI 261
P L+ + H + +KLVY+++++A+G A VSGG L +
Sbjct: 319 TGGPGLLLKV---------------KHAVFDKLVYRRLKAALGGRCIAAVSGGAPLGERL 363
Query: 262 DLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAG 321
F+ IGV V GYGLTE++ T +G+VG P+ T ++I G
Sbjct: 364 AHFFRGIGVPVMEGYGLTETTAAACLNTATAVRVGTVGKPVGGTSVRI-----------G 412
Query: 322 SKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLE 381
G V ++G V + Y+ NP AT++AL EDGW +TGDIG + G L +
Sbjct: 413 EDGEVLIKGDVVFRSYWDNPKATEEAL-EDGWFHTGDIGEL----------DADGFLKIT 461
Query: 382 GRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 433
GR K+ IV + G+NV P LE+ LI Q +VIG Q GA+I D E
Sbjct: 462 GRKKEIIVTAGGKNVSPAVLEDRLRAHPLISQCMVIGDAQPFIGALITIDPE 513
>gi|448711888|ref|ZP_21701431.1| AMP-dependent synthetase and ligase [Halobiforma nitratireducens
JCM 10879]
gi|445790973|gb|EMA41622.1| AMP-dependent synthetase and ligase [Halobiforma nitratireducens
JCM 10879]
Length = 656
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 134/413 (32%), Positives = 203/413 (49%), Gaps = 64/413 (15%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIV----------PAENGD-KFLSML 107
DD+A+ +YTSGTTG PKGV LTH+N + +Y V P +GD + +S L
Sbjct: 206 DDLASLIYTSGTTGQPKGVKLTHRNFRANVNQVYRRVGPRPDKDTDTPTIDGDSRMVSYL 265
Query: 108 PPWHVYERACGYFI-FSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQ 165
P HV+ER G+F+ F+ G + Y + LK+D QP SVP VYE +Y I++Q
Sbjct: 266 PLAHVFERTAGHFLPFAAGATVAYAESSDTLKEDFSAVQPTGATSVPRVYEKIYDAIREQ 325
Query: 166 IFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAIL 225
S R+ A T R Y+ P IL
Sbjct: 326 ATESPIKERIFNWA--------TDVGRAYQ------RADDPG---------------PIL 356
Query: 226 WPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPV 284
+A+KLV+ +++ A+G + + VSGGG+L + Y +G+ + GYGLTE++PV
Sbjct: 357 EAKLSIADKLVFGQVKDALGGNIEMLVSGGGTLSPDLCTLYHGMGLPIFEGYGLTETAPV 416
Query: 285 IAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLP-------AGSKGIVKVRGSQVMQGY 337
+ P +G+VG P+ E+++ D+ V+P AG G + VRG V +GY
Sbjct: 417 VTTNPPERPQIGTVGPPVVGCEVRVDDS----VVPDGEAADTAGETGELLVRGPNVAEGY 472
Query: 338 FKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVE 397
++ P AT +A DGW TGDI I P +V R K +VLSTG+NV
Sbjct: 473 WEKPGATDRAFTADGWFRTGDIVTIRPDD----------YIVFHERRKQLLVLSTGKNVA 522
Query: 398 PLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADAS 450
P +E++ + Q +V+G ++ GA+IVP+ + + A+ I D++
Sbjct: 523 PAPIEDSFAAREPVEQCMVVGDGEKFVGALIVPNVDALRRLAEDEGIDLPDSA 575
>gi|384172735|ref|YP_005554112.1| long-chain-fatty-acid-CoA ligase [Arcobacter sp. L]
gi|345472345|dbj|BAK73795.1| long-chain-fatty-acid-CoA ligase [Arcobacter sp. L]
Length = 580
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 142/466 (30%), Positives = 225/466 (48%), Gaps = 70/466 (15%)
Query: 19 VEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVM 78
++E ++YDEI+ +G++ DS H E D+I + +YTSG TG PKGVM
Sbjct: 138 IKEPNFYNYDEILVIGQQ----ICDSKGFIPHKAEE----DEIFSIIYTSGNTGTPKGVM 189
Query: 79 LTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYT-AVRNLK 137
LTHKN++ Q+R + ++ + LS+LP H++ER + SRGI + + + N+
Sbjct: 190 LTHKNIVSQLRDINKLIDLPKEEVALSLLPLAHIFERTVMSYYLSRGISIYFVDDILNVA 249
Query: 138 DDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGF 197
+ ++ +P M VP + E +++ I+ QI +++A ++F+Y
Sbjct: 250 NLMKIVKPTIMTVVPRLLEKIFNKIKTQILEKPFFSKIIA----SLAFSY---------- 295
Query: 198 CLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGS 256
L N + S+L + D KLVY K + G + VSGG
Sbjct: 296 ALKENLDKSSFLFKIYD-------------------KLVYSKFREIFGSRVQKLVSGGAP 336
Query: 257 LPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNE 316
L I F+ IGV V GYGLTE SPVI+ P+ N +GS G I +IKI A+ E
Sbjct: 337 LSKEIAQFFVNIGVPVYQGYGLTEFSPVISTNYPSANKVGSCGKVIPSAKIKI--AQNKE 394
Query: 317 VLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGG 376
+L V G +M+GY T + +D+DGWL+TGDI ++ G
Sbjct: 395 LL---------VSGPSLMKGYLNQEELTAKTIDKDGWLHTGDIAYLDEE----------G 435
Query: 377 VLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVL 436
L + R K+ STGE V + +E+ + I VVI ++++ A++ DKE+
Sbjct: 436 YLFITSRLKEIFKTSTGEYVNAVAIEQKLSKDRYIEFAVVISENKKFTTALLFIDKEKYQ 495
Query: 437 MAAK---RLSI-VHADASEL--SKEKTISLLYGELRKWTSKCSFQI 476
+A K L+I + E+ + K IS + +L +W F+I
Sbjct: 496 LAKKINNNLTIEEYYKQPEILDNISKHISNINKDLNQWEKIVDFRI 541
>gi|160899186|ref|YP_001564768.1| AMP-dependent synthetase/ligase [Delftia acidovorans SPH-1]
gi|160364770|gb|ABX36383.1| AMP-dependent synthetase and ligase [Delftia acidovorans SPH-1]
Length = 647
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 134/442 (30%), Positives = 217/442 (49%), Gaps = 54/442 (12%)
Query: 58 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERAC 117
++D+A VYTSGTTG PKGVMLTH+N++ ++++ + + D FLS LP H +ER
Sbjct: 209 AEDLAAVVYTSGTTGKPKGVMLTHRNVVSNVQAVMQRLQPRSDDVFLSFLPLSHTFERTA 268
Query: 118 GYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 175
GY++ + G + Y +V L +DL+ +P ++SVP +YE +++ + + +
Sbjct: 269 GYYLALAVGACVAYARSVAQLAEDLKTQRPTVLVSVPRIYERVHAKVMETL--------- 319
Query: 176 VARALIRISFAYTAFKRIYEGFCLTRN----QKQPSYLVALIDWLWARIICAILWPL--H 229
ARA ++ A R ++ FC T+ Q + + WL WP+ H
Sbjct: 320 -ARAPLKAQLFELAQARGWQRFCETQGIADAQAPQPEVPGWMQWL--------PWPVLNH 370
Query: 230 LLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARR 289
L+A+ L+ + G + VSGG L I + +G+ + GYG+TE+SPV+ A
Sbjct: 371 LVAKPLLAQ----FGGRVRVAVSGGAPLSPTIARCFLGLGLPLIQGYGMTETSPVVCANT 426
Query: 290 PTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALD 349
N +VGH + E++I G ++VRG VM+GY++ P T +
Sbjct: 427 LEDNHPATVGHALPGVEVRI-----------GENRELQVRGPCVMRGYWERPEDTAKTFT 475
Query: 350 EDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSS 409
+DGWL TGD I GR R ++GR K+ IV STGE + P +LE A
Sbjct: 476 DDGWLRTGDQAVI----EDGRVR-------IQGRIKEIIVTSTGEKIPPADLELAITGDP 524
Query: 410 LIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWT 469
Q+ V+G+D+ A+ V ++ E A+RL + D L+ + K
Sbjct: 525 FFTQVFVVGEDRPFIAAVAVIERGEWQTMARRLGLDPEDPKSLNHSAAEREALARIEKQV 584
Query: 470 SKCSFQIGP--IHVVDEPFTVN 489
+ + P +H+ EP+T+
Sbjct: 585 ASFARYAVPRAVHLELEPWTIE 606
>gi|27376399|ref|NP_767928.1| long-chain-fatty-acid--CoA ligase [Bradyrhizobium japonicum USDA
110]
gi|27349539|dbj|BAC46553.1| blr1288 [Bradyrhizobium japonicum USDA 110]
Length = 619
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 125/392 (31%), Positives = 207/392 (52%), Gaps = 49/392 (12%)
Query: 55 TIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYE 114
+ DD+A VYTSGTTG PKGVML+H N++ ++++ + A D FLS LP H +E
Sbjct: 192 AVAPDDLAAIVYTSGTTGRPKGVMLSHDNVVANVKAIAHRIAASPDDVFLSFLPLSHTFE 251
Query: 115 RACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAA 172
R GY+ + G + Y +V L DDL+ +P ++SVP +YE +Y+ I + ++ +
Sbjct: 252 RTGGYYYPIAAGACVAYARSVPQLGDDLKHVRPTVLVSVPRIYERVYALIMQHRASAGS- 310
Query: 173 RRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLA 232
+ RAL+ ++ A + + +Q ++L+D L WP L
Sbjct: 311 ---IERALLDLTIAVGGRR---------FDARQGRGALSLLDRL--------AWP---LL 347
Query: 233 EKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPT 291
++LV K+ + +G + VSGG + + + A+G+ + GYG+TE+SPV++ P
Sbjct: 348 KQLVADKVLAQLGGRLRVAVSGGAPIAEPVIRLFLALGLDILQGYGMTETSPVVSVNTPE 407
Query: 292 CNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDED 351
N SVGH ++ E ++ E +E+L VRG VM GY+ P T++ + D
Sbjct: 408 DNDPRSVGHVLDGVEARL--GENDELL---------VRGPSVMLGYWHKPEETRRVKEAD 456
Query: 352 GWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLI 411
GWL+TGD ++R G + + GR KD +V STGE + P++LE A L L
Sbjct: 457 GWLHTGD-----------QARIENGRITITGRIKDILVTSTGEKIAPVDLETAILADPLF 505
Query: 412 RQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLS 443
Q +V+G+ + A++V + + + +RL+
Sbjct: 506 EQALVVGEQRPFLAALVVLNAKAWVQEKERLA 537
>gi|390951964|ref|YP_006415723.1| AMP-forming long-chain acyl-CoA synthetase [Thiocystis violascens
DSM 198]
gi|390428533|gb|AFL75598.1| AMP-forming long-chain acyl-CoA synthetase [Thiocystis violascens
DSM 198]
Length = 605
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 132/375 (35%), Positives = 195/375 (52%), Gaps = 48/375 (12%)
Query: 61 IATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF 120
+AT VYTSGTTG PKGVML+H+N+L + + ++ D FLS LP H+ ER GY+
Sbjct: 188 LATIVYTSGTTGRPKGVMLSHRNILTNVHGVVTLINVYPEDLFLSFLPLSHMLERTGGYY 247
Query: 121 --IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 178
I + +V L +DLQ +P MI+VP V+E +Y +Q Q+ + A R + R
Sbjct: 248 LPIMAGSCVAFARSVGQLAEDLQSIRPTVMIAVPRVFERVYQRLQDQLLSRPAPVRWLFR 307
Query: 179 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 238
+ ++ + AF R +G R P L L WL R+ A+L EKL
Sbjct: 308 --LAVATGWRAFLR-EQG----RGGWHPRLL--LWPWLRRRVGAAVL-------EKLG-- 349
Query: 239 KIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSV 298
G + VSGG +LP + + +G+ + GYGLTE+SPV++ NV SV
Sbjct: 350 ------GRMRVAVSGGAALPAGVAHTFIGLGLPLIQGYGLTETSPVVSFNPLRKNVPESV 403
Query: 299 GHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGD 358
G PI +++I G+ + V+G VMQGY+ N +AT + L +DGWL+TGD
Sbjct: 404 GVPIRGIQVRI-----------GADDELMVKGDNVMQGYWNNHAATAKVLTQDGWLHTGD 452
Query: 359 IGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIG 418
++R G + + GR KD +VLS GE V P +LE A + L Q++V+G
Sbjct: 453 -----------QARIEDGHIYITGRIKDILVLSNGEKVPPADLEMAIVMDPLFDQVLVLG 501
Query: 419 QDQRRPGAIIVPDKE 433
+ A++V + E
Sbjct: 502 ERHSYLSALLVLNAE 516
>gi|291279849|ref|YP_003496684.1| long-chain fatty-acid-CoA ligase [Deferribacter desulfuricans SSM1]
gi|290754551|dbj|BAI80928.1| long-chain fatty-acid-CoA ligase [Deferribacter desulfuricans SSM1]
Length = 610
Score = 188 bits (478), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 138/440 (31%), Positives = 213/440 (48%), Gaps = 61/440 (13%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQI---RSLYDIVPAENGDKFLSMLPPWHVYER 115
DD+AT +YTSGTTG PKGVMLTH N + +I +++ E DKFLS LP H ER
Sbjct: 181 DDLATLIYTSGTTGVPKGVMLTHYNFVSEIILGTKKVEVLKPE--DKFLSFLPLSHALER 238
Query: 116 ACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 173
A GY+I G ++++ ++ + +++ +P +M+SVP ++E +YS I + + S +
Sbjct: 239 AVGYYIPIYNGCQMVFAESIDKVPENMVEVKPTWMVSVPRLFEKMYSRIYENVHAMSGFK 298
Query: 174 RVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAE 233
+ + + + Y K I + N S+ A D
Sbjct: 299 KSLFHKAVEVGKKYVEKKYIKK-----ENPGMLSFKYAFFD------------------- 334
Query: 234 KLVYKKIQSAIGISKAG-VSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTC 292
KL++ KI+ G + G VSGG L +I+ F+ IG+ + GYGLTE+SP +
Sbjct: 335 KLIFSKIRERFGGNIQGFVSGGAPLDKNINEFFWVIGMPIFEGYGLTETSPGVCINTFKQ 394
Query: 293 NVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDG 352
GSVG HT K+ E E+L ++G +M+GY+KN ATK+ALDE+G
Sbjct: 395 VRFGSVGTMFEHTYAKL--DEDGELL---------LKGPMIMKGYYKNEEATKEALDEEG 443
Query: 353 WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIR 412
W TGDIG I G L + R K+ I+ + G+N+ P +E I
Sbjct: 444 WFRTGDIGKIDED----------GFLYIVDRKKELIITAGGKNIAPQPIENELKLDKYIS 493
Query: 413 QIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGE-------- 464
Q V G + A++VP+ E ++ AK I + D ++L + I L+ E
Sbjct: 494 QAFVYGDRKPYLVALLVPNFERIVEYAKEHHIEYFDMNDLVANEKILKLFKERVEEINKK 553
Query: 465 LRKWTSKCSFQIGPIHVVDE 484
L K+ + F + P+ E
Sbjct: 554 LPKYETIKKFSLVPVDFTIE 573
>gi|333914694|ref|YP_004488426.1| long-chain-fatty-acid--CoA ligase [Delftia sp. Cs1-4]
gi|333744894|gb|AEF90071.1| Long-chain-fatty-acid--CoA ligase [Delftia sp. Cs1-4]
Length = 647
Score = 188 bits (477), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 134/442 (30%), Positives = 217/442 (49%), Gaps = 54/442 (12%)
Query: 58 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERAC 117
++D+A VYTSGTTG PKGVMLTH+N++ ++++ + + D FLS LP H +ER
Sbjct: 209 AEDLAAVVYTSGTTGKPKGVMLTHRNVVSNVQAVMQRLQPRSDDVFLSFLPLSHTFERTA 268
Query: 118 GYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 175
GY++ + G + Y +V L +DL+ +P ++SVP +YE +++ + +
Sbjct: 269 GYYLALAVGACVAYARSVAQLAEDLKTQRPTVLVSVPRIYERVHAKVME----------T 318
Query: 176 VARALIRISFAYTAFKRIYEGFCLTRN----QKQPSYLVALIDWLWARIICAILWPL--H 229
+ARA ++ A R ++ FC T+ Q + + WL WP+ H
Sbjct: 319 LARAPLKAQLFELAQARGWQRFCETQGIADAQAPQPEVPGWMQWL--------PWPVLNH 370
Query: 230 LLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARR 289
L+A+ L+ + G + VSGG L I + +G+ + GYG+TE+SPV+ A
Sbjct: 371 LVAKPLLAQ----FGGRVRVAVSGGAPLSPTIARCFLGLGLPLIQGYGMTETSPVVCANT 426
Query: 290 PTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALD 349
N +VGH + E++I G ++VRG VM+GY++ P T +
Sbjct: 427 LEDNHPATVGHALPGVEVRI-----------GENRELQVRGPCVMRGYWERPEDTAKTFT 475
Query: 350 EDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSS 409
+DGWL TGD I GR R ++GR K+ IV STGE + P +LE A
Sbjct: 476 DDGWLRTGDQAVI----EDGRVR-------IQGRIKEIIVTSTGEKIPPADLELAITGDP 524
Query: 410 LIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWT 469
Q+ V+G+D+ A+ V ++ E A+RL + D L+ + K
Sbjct: 525 FFTQVFVVGEDRPFIAAVAVIERGEWQAMAQRLGLDPEDPKSLNHSAAEREALARIEKQV 584
Query: 470 SKCSFQIGP--IHVVDEPFTVN 489
+ + P +H+ EP+T+
Sbjct: 585 ASFARYAVPRAVHLELEPWTIE 606
>gi|319941890|ref|ZP_08016211.1| hypothetical protein HMPREF9464_01430 [Sutterella wadsworthensis
3_1_45B]
gi|319804543|gb|EFW01413.1| hypothetical protein HMPREF9464_01430 [Sutterella wadsworthensis
3_1_45B]
Length = 613
Score = 188 bits (477), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 144/439 (32%), Positives = 216/439 (49%), Gaps = 52/439 (11%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 118
DD+A +YTSGTTG PKGVMLTH NL+ + + D V D +LS LP H +ER
Sbjct: 186 DDLAGLIYTSGTTGRPKGVMLTHANLVANVAQISDAVDITESDIYLSFLPFSHTFERTVA 245
Query: 119 YFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 176
++ + G + + +V+++++DL QP M +VP V E LY Q ++ S +
Sbjct: 246 HYAALAHGASMAFARSVQHIENDLADVQPTIMCTVPRVLERLYQKQQLELAKGSEVEQ-- 303
Query: 177 ARALIRISFAYTAFKRIYEGFCLTRNQK-QPSYLVALIDWLWARIICAILWPLHLLAEKL 235
R +A A R FC +PS AL + + L +L E
Sbjct: 304 ----HRSQWAAEAGWR---RFCRDNGLPVEPSAREALDETV-----------LPVLDED- 344
Query: 236 VYKKIQSAIG-ISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNV 294
V +K++ G KA + GG SL + ++ A+GV ++ YGLTE+SP+++ R N
Sbjct: 345 VGRKVRGLFGGRMKAILCGGASLNQSVARYFCAMGVPLRQVYGLTETSPIVSLTRAEMNH 404
Query: 295 LGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWL 354
VG P+ T++++ G + ++V+G QVMQGY+ P+ TK A EDGW
Sbjct: 405 PACVGQPVAQTQVRL-----------GDRDELQVKGPQVMQGYWNKPAETKHAFTEDGWF 453
Query: 355 NTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQI 414
+TGD ++ GG + ++GR K+ IV STGE + P++LE A L Q+
Sbjct: 454 HTGDQADLSD----------GGRVRIKGRIKEIIVTSTGEKIAPVDLEFAIQEDPLFEQV 503
Query: 415 VVIGQDQRRPGAIIV--PDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSKC 472
V G+++ A++V PD + L A LS D L + L +R
Sbjct: 504 FVCGENRPFISAVLVLQPDLWKALCAEMELSA--DDPQTLHDRSMLRYLVKRVRAAAKDF 561
Query: 473 -SFQIG-PIHVVDEPFTVN 489
S+ I I VVDEPFT
Sbjct: 562 PSYGIPRSIAVVDEPFTAE 580
>gi|448323702|ref|ZP_21513155.1| AMP-dependent synthetase and ligase [Natronobacterium gregoryi SP2]
gi|445620838|gb|ELY74325.1| AMP-dependent synthetase and ligase [Natronobacterium gregoryi SP2]
Length = 655
Score = 187 bits (476), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 135/414 (32%), Positives = 204/414 (49%), Gaps = 65/414 (15%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIV-PAENGD----------KFLSML 107
DD+A+ +YTSGTTG PKGV LTH+N + +Y V P + D K +S L
Sbjct: 206 DDLASIIYTSGTTGQPKGVKLTHRNFRANVNQVYRRVGPRPDKDEETASIDGDSKMVSYL 265
Query: 108 PPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQ 165
P HV+ER G+F+ F+ G + Y + LK+D QP SVP VYE +Y I++Q
Sbjct: 266 PLAHVFERTAGHFLPFAAGATVAYAESSETLKEDFGTVQPTGATSVPRVYEKIYDAIREQ 325
Query: 166 IFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAIL 225
S+ R+ A TA R Y+ P IL
Sbjct: 326 ATESAVKERIFNWA--------TAVGRKYQ------RADDPG---------------PIL 356
Query: 226 WPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPV 284
+A+KLV+ +++ A+G + + VSGGG+L + Y +G+ + GYGLTE++PV
Sbjct: 357 EAELSIADKLVFSQVKEALGGNIELLVSGGGTLSSDLCTLYHGMGLPIYEGYGLTETAPV 416
Query: 285 IAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLP-------AGSKGIVKVRGSQVMQGY 337
+ P +G+VG P+ E+ + D+ V+P G G + V+G V +GY
Sbjct: 417 VTTNPPEEPKIGTVGPPVVDCEVTVDDS----VVPDGETANTEGETGELLVKGPNVAEGY 472
Query: 338 FKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVE 397
++ P AT +A EDGW TGDI I P + R K +VLSTG+NV
Sbjct: 473 WEKPEATDRAF-EDGWFRTGDIVTIRPDD----------YIEFHERRKQLLVLSTGKNVA 521
Query: 398 PLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASE 451
P +E+A L+ Q +V+G ++ GA+IVP+ + + A+ I D+++
Sbjct: 522 PAPIEDAFAARELVEQCLVVGDGEKFVGALIVPNVDALRRRAEDEGIDLPDSAQ 575
>gi|429191225|ref|YP_007176903.1| AMP-forming long-chain acyl-CoA synthetase [Natronobacterium
gregoryi SP2]
gi|429135443|gb|AFZ72454.1| AMP-forming long-chain acyl-CoA synthetase [Natronobacterium
gregoryi SP2]
Length = 660
Score = 187 bits (476), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 135/414 (32%), Positives = 204/414 (49%), Gaps = 65/414 (15%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIV-PAENGD----------KFLSML 107
DD+A+ +YTSGTTG PKGV LTH+N + +Y V P + D K +S L
Sbjct: 211 DDLASIIYTSGTTGQPKGVKLTHRNFRANVNQVYRRVGPRPDKDEETASIDGDSKMVSYL 270
Query: 108 PPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQ 165
P HV+ER G+F+ F+ G + Y + LK+D QP SVP VYE +Y I++Q
Sbjct: 271 PLAHVFERTAGHFLPFAAGATVAYAESSETLKEDFGTVQPTGATSVPRVYEKIYDAIREQ 330
Query: 166 IFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAIL 225
S+ R+ A TA R Y+ P IL
Sbjct: 331 ATESAVKERIFNWA--------TAVGRKYQ------RADDPG---------------PIL 361
Query: 226 WPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPV 284
+A+KLV+ +++ A+G + + VSGGG+L + Y +G+ + GYGLTE++PV
Sbjct: 362 EAELSIADKLVFSQVKEALGGNIELLVSGGGTLSSDLCTLYHGMGLPIYEGYGLTETAPV 421
Query: 285 IAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLP-------AGSKGIVKVRGSQVMQGY 337
+ P +G+VG P+ E+ + D+ V+P G G + V+G V +GY
Sbjct: 422 VTTNPPEEPKIGTVGPPVVDCEVTVDDS----VVPDGETANTEGETGELLVKGPNVAEGY 477
Query: 338 FKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVE 397
++ P AT +A EDGW TGDI I P + R K +VLSTG+NV
Sbjct: 478 WEKPEATDRAF-EDGWFRTGDIVTIRPDD----------YIEFHERRKQLLVLSTGKNVA 526
Query: 398 PLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASE 451
P +E+A L+ Q +V+G ++ GA+IVP+ + + A+ I D+++
Sbjct: 527 PAPIEDAFAARELVEQCLVVGDGEKFVGALIVPNVDALRRRAEDEGIDLPDSAQ 580
>gi|389847450|ref|YP_006349689.1| acyl-CoA synthetase [Haloferax mediterranei ATCC 33500]
gi|448617228|ref|ZP_21665883.1| acyl-CoA synthetase [Haloferax mediterranei ATCC 33500]
gi|388244756|gb|AFK19702.1| acyl-CoA synthetase [Haloferax mediterranei ATCC 33500]
gi|445748577|gb|EMA00024.1| acyl-CoA synthetase [Haloferax mediterranei ATCC 33500]
Length = 667
Score = 187 bits (476), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 136/422 (32%), Positives = 201/422 (47%), Gaps = 58/422 (13%)
Query: 28 DEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQ 87
D+I+ LG R ++A + DD+A+ +YTSGTTG PKG LTH N
Sbjct: 176 DDILTLGEVHRHGEEVFDEAEYESWLDARDPDDLASLIYTSGTTGQPKGAQLTHWNFRSN 235
Query: 88 IRSLY---------DIVPAENGDKF-LSMLPPWHVYERACGYFI-FSRGIELMYT-AVRN 135
+ Y PA + D LS LP HV ER G+F+ F+ G + Y +
Sbjct: 236 VNESYRRFGPRPNKSDAPAVSPDSVSLSFLPLAHVLERMAGHFMMFAAGATVAYAESPDT 295
Query: 136 LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYE 195
L++D Q QP SVP VYE LY I+ Q S +R+ A + + Y
Sbjct: 296 LREDFQLVQPTAGTSVPRVYEKLYDAIRAQASESPVKKRIFEWA-VDVGQEY-------- 346
Query: 196 GFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGG 254
P YL++ H +A++LV+ +++ A+G + + +SGG
Sbjct: 347 -----HTTDSPGYLLSA---------------KHRVADRLVFDQVREALGGNIEFFISGG 386
Query: 255 GSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAET 314
GSL + Y A+G+ + GYGLTE+SPVI P +G++G+P+ EIK+
Sbjct: 387 GSLSAELCALYHAMGLPIFEGYGLTETSPVITVNPPEAPKIGTIGYPLREVEIKLDKTVV 446
Query: 315 NEVL--PAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDG----WLNTGDIGWIAPHHSR 368
+ L G G + VRG V GY+ P T++A ED W TGD+
Sbjct: 447 GDQLGDAGGEVGELLVRGPNVTPGYWNRPEETEEAFVEDDEGNRWFRTGDV--------- 497
Query: 369 GRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAII 428
RR G + RAK +VLSTG+NV P +E+A S+++ Q +V+G ++ A+I
Sbjct: 498 -VERRPDGYIAFRERAKQILVLSTGKNVPPGPIEDAFASSTVVEQCMVLGDGRKFISALI 556
Query: 429 VP 430
VP
Sbjct: 557 VP 558
>gi|378822222|ref|ZP_09845037.1| AMP-binding enzyme [Sutterella parvirubra YIT 11816]
gi|378598964|gb|EHY32037.1| AMP-binding enzyme [Sutterella parvirubra YIT 11816]
Length = 620
Score = 187 bits (475), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 126/415 (30%), Positives = 205/415 (49%), Gaps = 44/415 (10%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 118
+D+A VYTSGTTGNPKGVMLTH+N+L ++ + + + LS LP H +ER
Sbjct: 189 NDLAALVYTSGTTGNPKGVMLTHRNILSNLQGVLKSIQPSESETLLSFLPLSHTFERTAS 248
Query: 119 YFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 176
Y++ G + ++ NL DDL+ +P ++SVP VYE ++ ++ A + +
Sbjct: 249 YYLALGLGFTCAFNRSIANLADDLKTIRPTIIMSVPRVYEMIHG----KVMDGLAKKPPM 304
Query: 177 ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLV 236
R + + A ++R FC ++ +D A + +K V
Sbjct: 305 VRRIFNWAVA-VGWRR----FCRENGLPVEPSALSFLDPFVAGFL-----------DKKV 348
Query: 237 YKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVL 295
K ++ A G +SGG +LP ++ + A+GV + GYG+TE+SP+I+ RP N
Sbjct: 349 GKTLRDAFGDRIHLFISGGAALPTNVAKVFLALGVPIFQGYGMTETSPIISVNRPGSNHP 408
Query: 296 GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLN 355
+VG + + E+++ D + ++VRG VM+GY+ P AT++ ED WL
Sbjct: 409 NTVGPALANIEVRLGDGDE-----------IQVRGPSVMKGYWNRPEATREIFTEDDWLR 457
Query: 356 TGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIV 415
TGD+G I + G R + GR K+ IV STGE V P +LE A L Q +
Sbjct: 458 TGDVGEI---YKDGHIR-------ITGRIKEIIVTSTGEKVPPTDLEAAVTTDRLFTQCM 507
Query: 416 VIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTS 470
V+G D+ A+ V ++ + L + D + L K++ + ++ TS
Sbjct: 508 VVGDDRPFISALCVVNEGPWAALCEELGLDPNDPASLDKKEAKAAALRRIKAATS 562
>gi|448737723|ref|ZP_21719758.1| acyl-CoA synthetase [Halococcus thailandensis JCM 13552]
gi|445803279|gb|EMA53577.1| acyl-CoA synthetase [Halococcus thailandensis JCM 13552]
Length = 643
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 133/422 (31%), Positives = 213/422 (50%), Gaps = 55/422 (13%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYD-IVPAEN-GD--------KFLSMLP 108
DD+A+ VYTSGTTG PKGV LTH+N + +Y P E+ GD LS LP
Sbjct: 206 DDLASLVYTSGTTGQPKGVRLTHRNFKANVDQVYRRFGPREDKGDLPTIDPDVSTLSFLP 265
Query: 109 PWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQI 166
HV+ER G+F+ F+ G + Y + L++D P SVP VYE LY I++Q
Sbjct: 266 LAHVFERLAGHFLMFAAGASVAYAESPDTLQEDFPLVTPSTGTSVPRVYEKLYDSIREQA 325
Query: 167 FTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILW 226
+ SA R + + + Y +R G L +
Sbjct: 326 -SESALRERIFEWAVDVGREYQ--ERESPGLSLRAKRA---------------------- 360
Query: 227 PLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVI 285
LA++LV+++++ +G + + +SGGGSL + ++ +G+ + GYGLTE++PV+
Sbjct: 361 ----LADRLVFEQVREGVGGNIEFFISGGGSLSPELGRLFDGMGLPILEGYGLTETAPVV 416
Query: 286 AARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA-GSKGIVKVRGSQVMQGYFKNPSAT 344
A P +G++G P+ E+K+ + + L A G G + VRG V GY++NP AT
Sbjct: 417 AVNPPEAPEIGTIGPPVVDEEVKVDASVVPDDLDADGEVGELLVRGPNVTDGYWENPEAT 476
Query: 345 KQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEA 404
+ + D + W TGD+ RR G + R+K +VLSTG+NV P +E+A
Sbjct: 477 EDSFDGN-WFRTGDV----------VERRPDGYIAFRERSKQLLVLSTGKNVAPGPIEDA 525
Query: 405 ALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI-VHADASELSKEKTISLLYG 463
+ L+ Q +V+G ++ ++VP++E V A+ I + D+S L + + + G
Sbjct: 526 FAQRQLVEQCMVLGDGEKFVSGLVVPNEERVRKWAREEGIDLPDDSSALCQNEHVQARIG 585
Query: 464 EL 465
E+
Sbjct: 586 EV 587
>gi|448303788|ref|ZP_21493734.1| AMP-dependent synthetase and ligase [Natronorubrum sulfidifaciens
JCM 14089]
gi|445592415|gb|ELY46602.1| AMP-dependent synthetase and ligase [Natronorubrum sulfidifaciens
JCM 14089]
Length = 648
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 126/392 (32%), Positives = 195/392 (49%), Gaps = 56/392 (14%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLY----------DIVPAENGDKF-LSML 107
DD+A+ +YTSGTTG PKGV LTH N + ++ + P+ + + +S L
Sbjct: 206 DDLASLIYTSGTTGRPKGVQLTHWNFRSNVNAVRKRFAPRPDKPEGTPSLDEESLAVSYL 265
Query: 108 PPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQ 165
P HV+ER G+F+ F+ G + Y + L+ D QP SVP VYE +Y I++Q
Sbjct: 266 PLAHVFERTAGHFVLFASGACVAYAESPDTLQADFSAVQPTTATSVPRVYEKIYDAIREQ 325
Query: 166 IFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAIL 225
S A +R+ A +++ A +L
Sbjct: 326 ASESGAKKRIFEWATD-----------------------------VGVEYQQADSPGVVL 356
Query: 226 WPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPV 284
LA+KLV+ ++ A+G + +SGGGSL + Y A+G+ + GYGLTE+SPV
Sbjct: 357 NAKRKLADKLVFSTVREALGGEIELLISGGGSLSTDLCQLYHAMGLPIYEGYGLTETSPV 416
Query: 285 IAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA---GSKGIVKVRGSQVMQGYFKNP 341
++ P +G++G+P+ +++I + ++ A G G + V+G V QGY+ P
Sbjct: 417 VSTNPPEAVKIGTIGYPLPGVDVQIDERVADQAAFADDPGDVGELLVKGPNVTQGYWNKP 476
Query: 342 SATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLEL 401
AT A EDGW TGDI +R G L RAK +VLSTG+NV P +
Sbjct: 477 GATTGAFTEDGWFRTGDI----------IHQRPDGFLEFRERAKQIMVLSTGKNVAPAPI 526
Query: 402 EEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 433
E+A S +I Q +V+G ++ GA++VP+ +
Sbjct: 527 EDAFAASEIIEQCMVVGDGEKFIGALLVPNSD 558
>gi|292656046|ref|YP_003535943.1| acyl-CoA synthetase [Haloferax volcanii DS2]
gi|448290037|ref|ZP_21481193.1| acyl-CoA synthetase [Haloferax volcanii DS2]
gi|291372084|gb|ADE04311.1| acyl-CoA synthetase [Haloferax volcanii DS2]
gi|445580429|gb|ELY34808.1| acyl-CoA synthetase [Haloferax volcanii DS2]
Length = 666
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 136/422 (32%), Positives = 204/422 (48%), Gaps = 58/422 (13%)
Query: 28 DEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQ 87
++++ LG R+ ++A + +D+A+ +YTSGTTG PKGV LTH N
Sbjct: 176 EDVLTLGELYRRGEEAYDEAAYESWLDERDPEDLASLIYTSGTTGQPKGVRLTHWNFRSN 235
Query: 88 IRSLYDIVPA--ENGDK--------FLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRN 135
+ Y + GD LS LP HV+ER G+F+ F+ G + Y +
Sbjct: 236 VNESYRRFGPRPDKGDTPVIGPDAVTLSFLPLAHVFERMAGHFMMFAAGATVAYAESPDT 295
Query: 136 LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYE 195
L++D Q +P SVP VYE LY I+ Q S A +RV A + + AY
Sbjct: 296 LREDFQLVRPTVGTSVPRVYEKLYDAIRAQASESPAKKRVFEWA-VGVGQAY-------- 346
Query: 196 GFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGG 254
P YL L H LA++LV+ +++ A+G + +SGG
Sbjct: 347 -----HTTDAPGYL---------------LTAKHRLADRLVFGQVRDALGGNLDFFISGG 386
Query: 255 GSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAET 314
GSL + Y A+G+ + GYGLTE+SPVI+ P +G++G+P+ + E K+
Sbjct: 387 GSLSAELCALYHAMGLPIYEGYGLTETSPVISVNPPEAPKIGTIGYPLRNVETKLDTTVV 446
Query: 315 NEVL--PAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDG----WLNTGDIGWIAPHHSR 368
+ L G G + VRG V +GY+ +P T+ A ED W TGD+
Sbjct: 447 GDQLGEAGGEVGELLVRGPSVTEGYWNDPEETEAAFVEDDEGRRWFRTGDV--------- 497
Query: 369 GRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAII 428
RR G + RAK +VLSTG+NV P +E+A S ++ Q +V+G ++ A+I
Sbjct: 498 -VERRPDGYIAFRERAKQILVLSTGKNVAPGPIEDAFASSPVVEQCMVLGDGRKFVSALI 556
Query: 429 VP 430
VP
Sbjct: 557 VP 558
>gi|332665277|ref|YP_004448065.1| long-chain-fatty-acid--CoA ligase [Haliscomenobacter hydrossis DSM
1100]
gi|332334091|gb|AEE51192.1| Long-chain-fatty-acid--CoA ligase [Haliscomenobacter hydrossis DSM
1100]
Length = 593
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 136/407 (33%), Positives = 200/407 (49%), Gaps = 57/407 (14%)
Query: 54 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 113
E++ +D+AT +YTSGTTG PKGVML+H+N++ I+S ++P K LS LP H++
Sbjct: 167 ESVVENDLATIIYTSGTTGRPKGVMLSHQNIISNIKSTIALLPVNCDKKTLSFLPLSHIF 226
Query: 114 ERACGYFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAA 172
ER Y + G + Y L +L+ +PHY+ +VPL+ E L I S
Sbjct: 227 ERMVIYTYVAVGASVTYAEGQEQLLSNLREVRPHYITAVPLIIERLVEQIMANSKKGSFL 286
Query: 173 RRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP-SYLVALIDWLWARIICAILWPLHLL 231
R+ + + I + Y KR QP +Y W R+ L
Sbjct: 287 RKRIIKWAIELGKNYYDSKR------------QPLAY--------WLRLS---------L 317
Query: 232 AEKLVYKKIQSAIGISKAG-VSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARR- 289
A LV+ + + G G V G +L + + A G+KV+ GYGLTE+SPVIA R
Sbjct: 318 ARILVFNRWRKMFGGRVEGIVVGAAALNPVLGRLFSAAGLKVREGYGLTETSPVIAFNRF 377
Query: 290 -PTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQAL 348
P + G+VG PI E++IV+ + G V+V+G VM GY++ P A+++ +
Sbjct: 378 EPGGSRFGTVGMPIPGVEVRIVNPDEE------GAGEVQVKGPNVMLGYYQQPEASREVM 431
Query: 349 DEDGWLNTGDIG-WIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALR 407
EDGW TGD+G W+ H R L L+GR D G+ + P +E+ L
Sbjct: 432 TEDGWFRTGDVGMWV---HKR--------FLKLKGRQDDMFKTGAGKFIAPEAVEKQLLH 480
Query: 408 SSLIRQIVVIGQDQRRPGAIIVP--DKEEVLMAAKRLSIVHADASEL 452
S I Q +V G + P A+IVP DK E A++ VH A +
Sbjct: 481 SEYISQCLVAGASRPAPYALIVPRFDKLEEWCKAQK---VHWTAPQF 524
>gi|330998740|ref|ZP_08322468.1| AMP-binding enzyme [Parasutterella excrementihominis YIT 11859]
gi|329576237|gb|EGG57753.1| AMP-binding enzyme [Parasutterella excrementihominis YIT 11859]
Length = 615
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 145/446 (32%), Positives = 223/446 (50%), Gaps = 68/446 (15%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRS-LYDIVPAENGDKFLSMLPPWHVYERAC 117
+D+A VYTSGTTG PKGVMLTHKN++ I + LY+I P + D +LS LP H +ER
Sbjct: 189 EDLAALVYTSGTTGKPKGVMLTHKNIMSDISALLYNIAPNPS-DTWLSFLPLSHTFERTT 247
Query: 118 GYFI---------FSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFT 168
Y+I FSRG V + DDL+ +P M+SVP V+E + + I +++
Sbjct: 248 SYYIGLGMGNKVTFSRG-------VARILDDLKLVRPSIMMSVPRVFEKVAAKINERLKQ 300
Query: 169 SSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPL 228
A R+V A + Y FC S + A D L +
Sbjct: 301 KGAVSRLVFNAAVDAG---------YRNFCRCNGLPVDSAVPAAFDRL-----------M 340
Query: 229 HLLAEKLVYKKIQSAI-GISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAA 287
L +KLV +I+++ G + VSGG +L + +G+++ GYG+TE+SP+I+
Sbjct: 341 DPLYDKLVRNQIKNSFGGRMRVAVSGGAALSPEVAKTIIGLGIEIFQGYGMTETSPIISV 400
Query: 288 RRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQA 347
+ N +VG + E K+ E +E+L VRG QVM+GY+K P T +
Sbjct: 401 NKIEANHPDTVGPILEGIEAKL--GEKDELL---------VRGPQVMRGYWKRPEDTFKT 449
Query: 348 LDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALR 407
LD +GWL+TGD I P G L ++GR K+ IV STGE V P+++E+A
Sbjct: 450 LDPEGWLSTGDQADILP----------GNYLKIKGRIKEIIVTSTGEKVPPVDIEQAIET 499
Query: 408 SSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRK 467
L Q +V G ++ ++V +K+ L++ D L+ + I + L++
Sbjct: 500 DPLFDQAMVYGDNRPFIVGLLVLNKDNFERFVVSLNLDPKDPEILTNKAVIREI---LKR 556
Query: 468 WTSKC-SF-QIG---PIHVVDEPFTV 488
+ C SF Q G + ++ EP+T+
Sbjct: 557 IKTACKSFPQYGVPRSVLLLKEPWTI 582
>gi|365876500|ref|ZP_09416021.1| amp-dependent synthetase and ligase [Elizabethkingia anophelis Ag1]
gi|442586511|ref|ZP_21005339.1| Long-chain acyl-CoA synthetases (AMP-forming) [Elizabethkingia
anophelis R26]
gi|365755812|gb|EHM97730.1| amp-dependent synthetase and ligase [Elizabethkingia anophelis Ag1]
gi|442563735|gb|ELR80942.1| Long-chain acyl-CoA synthetases (AMP-forming) [Elizabethkingia
anophelis R26]
Length = 588
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 151/497 (30%), Positives = 232/497 (46%), Gaps = 83/497 (16%)
Query: 7 LWGKKSSVAPDIVEEIPVFSYD---------EIIDLGRESRKAFSDSNDARKHYKYETIG 57
L+ K SV P + + VF++D EI+DLG + DS + I
Sbjct: 117 LYNKLISVQPKVSSLMGVFAFDDVKGAPNWKEILDLGED------DSTQSEIEDIANIIK 170
Query: 58 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGD----KFLSMLPPWHVY 113
+DDIAT +YTSGTTG PKGV LTH+N++ + + +P D K LS LP HV+
Sbjct: 171 TDDIATLIYTSGTTGRPKGVALTHENIVSNVLNSNPRIPDVKLDYKEMKCLSFLPLCHVF 230
Query: 114 ERACGYFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAA 172
ER Y G + + ++ + D+L+ +P +M VP + E +Y +I+ + A+
Sbjct: 231 ERMLLYLYQHNGYSIYFAESIDKVGDNLKEVKPQFMTVVPRLVEKVYD----KIYNTGAS 286
Query: 173 RRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLA 232
+ + + + + E + L ++ + + W+ A
Sbjct: 287 AGGMKTKIFLWALS------LVEDYELGKS-------MGIKGWI---------------A 318
Query: 233 EKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPT 291
+KLV+ K + +G + A VSG +L ++ + G+ + GYGLTE+SPVIA
Sbjct: 319 DKLVFSKWREGLGGNIVALVSGSAALSPRLNRIFHGAGIPILEGYGLTETSPVIAVNSFK 378
Query: 292 CNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDED 351
G+VG PI + E+KI AE E+L V+G+ V +GY+ + TK+A ED
Sbjct: 379 HRKFGTVGWPIENAEVKI--AEDGEIL---------VKGTSVFKGYYMDEEKTKEAFTED 427
Query: 352 GWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLI 411
G+ TGDIG+I G L + R K+ S G+ + P +E A S I
Sbjct: 428 GYFKTGDIGFIDDE----------GFLKITDRKKEMFKTSGGKYIAPQVIENNAKASKFI 477
Query: 412 RQIVVIGQDQRRPGAIIVPDKEEVLMAAKRL------SIVHADASELSKEK---TISLLY 462
QI+VIG ++ P A I PD E V A+R S A+E K++ I L
Sbjct: 478 EQIMVIGDGEKMPAAFIQPDFEFVKAWAERKGLNIGSSYAEIAANEDVKQRIAQEIEALN 537
Query: 463 GELRKWTSKCSFQIGPI 479
L KW F++ PI
Sbjct: 538 KHLGKWEQIKKFELTPI 554
>gi|448607753|ref|ZP_21659706.1| acyl-CoA synthetase [Haloferax sulfurifontis ATCC BAA-897]
gi|445737690|gb|ELZ89222.1| acyl-CoA synthetase [Haloferax sulfurifontis ATCC BAA-897]
Length = 668
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 137/422 (32%), Positives = 203/422 (48%), Gaps = 58/422 (13%)
Query: 28 DEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQ 87
D+++ LG R+ ++A + +D+A+ +YTSGTTG PKGV LTH N
Sbjct: 176 DDVLTLGELYRRGEGVYDEAAAESWLDERDPEDLASLIYTSGTTGQPKGVQLTHWNFRSN 235
Query: 88 IRSLYDIVPA--ENGDK--------FLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRN 135
+ Y + GD LS LP HV+ER G+F+ F+ G + Y +
Sbjct: 236 VNESYRRFGPRPDKGDTPVIGPDAVTLSFLPLAHVFERMAGHFMMFAAGATVAYAESPDT 295
Query: 136 LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYE 195
L++D Q +P SVP VYE LY I+ Q S A +RV A + + AY
Sbjct: 296 LREDFQLARPTVGTSVPRVYEKLYDAIRTQASESPAKKRVFEWA-VGVGQAY-------- 346
Query: 196 GFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGG 254
P YL L H LA++LV+ +++ A+G + +SGG
Sbjct: 347 -----HTTDAPGYL---------------LTAKHRLADRLVFGQVREALGDNIDFFISGG 386
Query: 255 GSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAET 314
GSL + Y A+G+ + GYGLTE+SPVI+ P +G++G+P+ E K+
Sbjct: 387 GSLSAELCALYHAMGLPIYEGYGLTETSPVISVNPPEEPKIGTIGYPLRTVETKLDATVV 446
Query: 315 NEVL--PAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDG----WLNTGDIGWIAPHHSR 368
+ L G G + VRG V +GY+ +P T+ A ED W TGD+
Sbjct: 447 GDRLGDAGGEVGELLVRGPSVTEGYWNDPEETEAAFVEDDEAERWFRTGDV--------- 497
Query: 369 GRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAII 428
RR G + RAK +VLSTG+NV P +E+A S ++ Q +V+G ++ A+I
Sbjct: 498 -VERRPDGYIAFRERAKQILVLSTGKNVAPGPIEDAFASSPVVEQCMVLGDGRKFVSALI 556
Query: 429 VP 430
VP
Sbjct: 557 VP 558
>gi|374623848|ref|ZP_09696345.1| AMP-dependent synthetase and ligase [Ectothiorhodospira sp. PHS-1]
gi|373942946|gb|EHQ53491.1| AMP-dependent synthetase and ligase [Ectothiorhodospira sp. PHS-1]
Length = 606
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 133/399 (33%), Positives = 195/399 (48%), Gaps = 49/399 (12%)
Query: 61 IATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG-Y 119
+AT VYTSGTTG KGVML+H N+L + P D FLS LP H ER G Y
Sbjct: 186 LATIVYTSGTTGRSKGVMLSHHNILSNAHASQQCAPMGADDLFLSFLPLSHTLERTAGCY 245
Query: 120 FIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 178
G ++ Y +++ L +DL +P MISVP +YE +Y I + S R +
Sbjct: 246 MPMMVGAQVAYARSIQGLAEDLLTLRPTVMISVPRIYERIYGRINAGLEEKSPLARKLFL 305
Query: 179 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 238
+ I + ++ G+ P L LWP + +K+V
Sbjct: 306 TTVNIGWRRFEHQQGRAGW-------HPGLL---------------LWP---VLKKIVAD 340
Query: 239 KIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 297
K+ S +G + V GG LP I F+ +G+ V G+G+TE+SPV++ RP N+ S
Sbjct: 341 KVTSRLGGRLRYAVCGGAPLPPPIARFFIGLGLPVFHGFGMTEASPVVSVNRPDDNLPAS 400
Query: 298 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 357
VG P+ E+KI D +E+L VRG VMQGY+ N AT++ +D DGWL++G
Sbjct: 401 VGAPLPGVEVKIGD--DDELL---------VRGPSVMQGYWNNEEATRETIDADGWLHSG 449
Query: 358 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 417
D + R G + ++ GR K+ +VL GE V P ++E A + Q +V+
Sbjct: 450 D---------KARFNEQGHIFII-GRIKEILVLGNGEKVPPADMEMAITLDPVFEQALVL 499
Query: 418 GQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEK 456
G+ + A++V + EE AK L + DA L K
Sbjct: 500 GEGKAYLSALVVLNPEEWEKLAKTLEVDPRDAEVLRSRK 538
>gi|303257838|ref|ZP_07343848.1| AMP-dependent synthetase and ligase [Burkholderiales bacterium
1_1_47]
gi|302859441|gb|EFL82522.1| AMP-dependent synthetase and ligase [Burkholderiales bacterium
1_1_47]
Length = 615
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 145/446 (32%), Positives = 223/446 (50%), Gaps = 68/446 (15%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRS-LYDIVPAENGDKFLSMLPPWHVYERAC 117
+D+A VYTSGTTG PKGVMLTHKN++ I + LY+I P + D +LS LP H +ER
Sbjct: 189 EDLAALVYTSGTTGKPKGVMLTHKNIMSDISALLYNIAPNPS-DTWLSFLPLSHTFERTT 247
Query: 118 GYFI---------FSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFT 168
Y+I FSRG V + DDL+ +P M+SVP V+E + + I +++
Sbjct: 248 SYYIGLGMGNKVTFSRG-------VARILDDLKLVRPSIMMSVPRVFEKVAAKINERLKQ 300
Query: 169 SSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPL 228
A R+V A + Y FC S + A D L +
Sbjct: 301 KGAVSRLVFNAAVDAG---------YRNFCRCNGLPVDSAVPAAFDRL-----------M 340
Query: 229 HLLAEKLVYKKIQSAI-GISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAA 287
L +KLV +I+++ G + VSGG +L + +G+++ GYG+TE+SP+I+
Sbjct: 341 DPLYDKLVRNQIKNSFGGRMRVAVSGGAALSPEVAKTIIGLGIEIFQGYGMTETSPIISV 400
Query: 288 RRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQA 347
+ N +VG + E K+ E +E+L VRG QVM+GY+K P T +
Sbjct: 401 NKIGANHPDTVGPILEGIEAKL--GEKDELL---------VRGPQVMRGYWKRPEDTFKT 449
Query: 348 LDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALR 407
LD +GWL+TGD I P G L ++GR K+ IV STGE V P+++E+A
Sbjct: 450 LDPEGWLSTGDQADILP----------GNYLKIKGRIKEIIVTSTGEKVPPVDIEQAIET 499
Query: 408 SSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRK 467
L Q +V G ++ ++V +K+ L++ D L+ + I + L++
Sbjct: 500 DPLFDQAMVYGDNRPFIVGLLVLNKDNFERFVVSLNLDPKDPEILTNKAVIREI---LKR 556
Query: 468 WTSKC-SF-QIG---PIHVVDEPFTV 488
+ C SF Q G + ++ EP+T+
Sbjct: 557 IKTACKSFPQYGVPRSVLLLKEPWTI 582
>gi|350561455|ref|ZP_08930293.1| AMP-dependent synthetase and ligase [Thioalkalivibrio
thiocyanoxidans ARh 4]
gi|349780487|gb|EGZ34805.1| AMP-dependent synthetase and ligase [Thioalkalivibrio
thiocyanoxidans ARh 4]
Length = 604
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 130/375 (34%), Positives = 185/375 (49%), Gaps = 47/375 (12%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 118
D +AT VYTSGTTG PKGVML+H+ LL + P D FLS LP H ER G
Sbjct: 182 DHLATIVYTSGTTGRPKGVMLSHRALLFNAHAASQCAPLGGEDVFLSFLPLSHTLERTAG 241
Query: 119 YFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 176
YF+ + G E+ + ++ L +DL+ QP ++SVP +YE++Y+ IQ + A R +
Sbjct: 242 YFLPMAVGAEVAFARSIAQLAEDLRVVQPTVLVSVPRIYESVYAKIQAGLKQKPAFARRL 301
Query: 177 ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLV 236
+A + +A + + G+ + AR + L L +L
Sbjct: 302 FQATVNTGWARFEYLQRRAGWSPRLLLWPLLRRLV------ARQV------LERLGGRLE 349
Query: 237 YKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLG 296
Y V GG LP I F+ +G+ V GYGLTE+SPV+ RP N+
Sbjct: 350 Y------------AVCGGAPLPPPIARFFIGLGLPVYHGYGLTEASPVVTVNRPDDNLPA 397
Query: 297 SVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNT 356
S+G P+ EI+I E +E+L R VM GY++N AT A+D DGWL+T
Sbjct: 398 SIGKPLPGVEIRI--GEQDELL---------TRSPSVMLGYWRNDEATAAAIDSDGWLHT 446
Query: 357 GDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVV 416
GD +R R G + + GR KD IVL GE V P ++E A L Q++V
Sbjct: 447 GD-------KARVDDR---GFVFITGRIKDIIVLGNGEKVPPADMEMAIQLDPLFDQVLV 496
Query: 417 IGQDQRRPGAIIVPD 431
IG+ + A++V D
Sbjct: 497 IGEARPFLSALVVLD 511
>gi|448307028|ref|ZP_21496929.1| AMP-dependent synthetase and ligase [Natronorubrum bangense JCM
10635]
gi|445596575|gb|ELY50660.1| AMP-dependent synthetase and ligase [Natronorubrum bangense JCM
10635]
Length = 648
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 130/429 (30%), Positives = 209/429 (48%), Gaps = 66/429 (15%)
Query: 24 VFSYDEIIDLGRE--SRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTH 81
+++ D++ D G +A+ + DA G DD+A+ +YTSGTTG PKGV LTH
Sbjct: 177 IYTLDDVYDRGEAVFDLEAYQERVDAP--------GLDDLASLIYTSGTTGQPKGVQLTH 228
Query: 82 KNLLHQIRSLYDI----------VPAENGDKF-LSMLPPWHVYERACGYFI-FSRGIELM 129
N + ++ +P+ + + +S LP HV+ER G+F+ F+ G +
Sbjct: 229 WNFRSNVNAVRKRFAPRPDKPAGIPSLDEESLAVSYLPLAHVFERTAGHFVLFASGSCVA 288
Query: 130 YT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYT 188
Y + L++D QP SVP VYE +Y I++Q S +R+ A
Sbjct: 289 YAESPDTLQEDFGTVQPTMATSVPRVYEKIYDAIREQASESGVKKRIFEWATD------- 341
Query: 189 AFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS- 247
+++ A IL +A+ LV+ ++ A+G
Sbjct: 342 ----------------------VGVEYQQADSPGPILSAKQSIADTLVFSTVREALGGEI 379
Query: 248 KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEI 307
+ +SGGGSL + Y A+G+ + GYGLTE+SPV++ P +G++G+P+ ++
Sbjct: 380 ELLISGGGSLSADLCQLYHAMGLPIYEGYGLTETSPVVSTNPPEAVKIGTIGYPLPGVDV 439
Query: 308 KIVDAETNEVL---PAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAP 364
KI ++ ++ G G + V+G V QGY+ P AT A +DGW TGDI
Sbjct: 440 KIDESAADQAAFTDDPGDVGELLVKGPNVTQGYWNKPGATTGAFTDDGWFRTGDI----- 494
Query: 365 HHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRP 424
+R G L RAK +VLSTG+NV P +E+A S +I Q +V+G ++
Sbjct: 495 -----IHQRPDGFLEFRERAKQIMVLSTGKNVAPAPIEDAFAASEIIEQCMVVGDGEKFI 549
Query: 425 GAIIVPDKE 433
GA++VP+ +
Sbjct: 550 GALLVPNSD 558
>gi|374597993|ref|ZP_09670995.1| AMP-dependent synthetase and ligase [Myroides odoratus DSM 2801]
gi|423323671|ref|ZP_17301513.1| hypothetical protein HMPREF9716_00870 [Myroides odoratimimus CIP
103059]
gi|373909463|gb|EHQ41312.1| AMP-dependent synthetase and ligase [Myroides odoratus DSM 2801]
gi|404609198|gb|EKB08594.1| hypothetical protein HMPREF9716_00870 [Myroides odoratimimus CIP
103059]
Length = 591
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 146/471 (30%), Positives = 225/471 (47%), Gaps = 82/471 (17%)
Query: 28 DEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQ 87
DE+ +LG + +SN + + + DD+AT +YTSGTTG PKGVML+H N+L
Sbjct: 148 DELFELGAD------ESNQEQVEQRKAAVTPDDLATLIYTSGTTGKPKGVMLSHNNILSN 201
Query: 88 IRSLYDIVP--AENGDKFLSMLPPWHVYERACGYFIFSRGIELMYT-AVRNLKDDLQRYQ 144
+ + VP E K LS LP HV+ER Y G+ + Y ++ + ++++ +
Sbjct: 202 VLGSSERVPFTREQHFKALSFLPLCHVFERMLIYLYQYSGVGIYYAESIDKMGENMKEVK 261
Query: 145 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARAL----IRISFAYTAFKRIYEGFCLT 200
P+ M VP + E +Y +IF + +A + +++ + + F Y + R GF
Sbjct: 262 PNVMTVVPRLLEKVYD----KIFATGSALTGIKKSIFFWALELGFKYQPYNR---GF--- 311
Query: 201 RNQKQPSYLVALIDWLWARIICAILWPLHL-LAEKLVYKKIQSAIGIS-KAGVSGGGSLP 258
+ L L +A KLV+KK Q A+G K VSG +L
Sbjct: 312 ------------------------FYNLQLGIARKLVFKKWQEALGGEMKIIVSGSAALQ 347
Query: 259 MHIDLFYEAIGVKVQVGYGLTESSPVIAA--RRPTCNVLGSVGHPINHTEIKIVDAETNE 316
+ + A G+ V GYGLTE+SPVIA R +G+VG P+++ +KI AE E
Sbjct: 348 PRLSRVFNAAGIPVMEGYGLTETSPVIAVNDERNKSMKIGTVGKPLSNVVVKI--AEDGE 405
Query: 317 VLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGG 376
+L +G VM GY+K+ TK+ L +DG+ +TGDIG I G
Sbjct: 406 IL---------CKGPNVMLGYYKDEERTKEEL-KDGYFHTGDIGTIDEE----------G 445
Query: 377 VLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVL 436
L + R K+ S G+ V P +E +S I QI+VIG+ ++ P A+I P+ E V
Sbjct: 446 FLKITDRKKEMFKTSGGKYVAPQIIENTLKQSRFIEQIMVIGEGEKMPAALIQPNFEFVR 505
Query: 437 MAAKRLSIVHADASE---------LSKEKTISLLYGELRKWTSKCSFQIGP 478
AKR +I + +E EK + + + KW F++ P
Sbjct: 506 EWAKRKNIALGNTNEELIQNEQVRQRIEKEVEFVNRKFGKWEQVKKFELTP 556
>gi|387131449|ref|YP_006294339.1| long-chain-fatty-acid--CoA ligase [Methylophaga sp. JAM7]
gi|386272738|gb|AFJ03652.1| Long-chain-fatty-acid--CoA ligase [Methylophaga sp. JAM7]
Length = 610
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 139/433 (32%), Positives = 211/433 (48%), Gaps = 56/433 (12%)
Query: 36 ESRKAFSDSNDARKHYKYETIGSDDI-----ATYVYTSGTTGNPKGVMLTHKNLLHQIRS 90
E A DS+ Y ++T+ D+ A+ +YTSGTTG PKGVML+H+N+L
Sbjct: 160 EGDIAVLDSDRWLDRYPHQTLIRKDLDGYKLASIIYTSGTTGRPKGVMLSHQNMLSVAYG 219
Query: 91 LYDIVPAENGDKFLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYM 148
+ D FLS LP H ER GY++ G + Y+ V L DDL++ +P +
Sbjct: 220 ALQFFDVFHDDVFLSFLPLSHTLERTGGYYLPMMAGASVTYSRGVAKLPDDLRQVKPTIL 279
Query: 149 ISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSY 208
I+VP ++E + + +Q+ T S ++ + + +I + ++R QKQ ++
Sbjct: 280 IAVPRLFERFSAQLNQQLATKSWFQKCLFKLVI-----HAGWRRFL------WQQKQANW 328
Query: 209 LVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAI 268
V ILWP +L K+ K +Q G + VSGG +LP + + +
Sbjct: 329 HV-----------IQILWP--ILGNKIADKFLQRLGGRLRLAVSGGAALPGYAAKLFIGL 375
Query: 269 GVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKV 328
+++ GYGLTE+SP+I+ P N SVG PI KI D E E+L V
Sbjct: 376 QLRLIQGYGLTETSPIISVNPPEKNRPQSVGPPIPGVTTKI-DPENQELL---------V 425
Query: 329 RGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCG--GVLVLEGRAKD 386
G M GY+ N AT Q +D DGWL+TGD +C G + + GR KD
Sbjct: 426 DGPGKMLGYWNNHKATAQTIDVDGWLHTGD------------QAKCDEQGYIHITGRIKD 473
Query: 387 TIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVH 446
+VLS GE P ++E A L+ L Q +V+G+ Q A++V D E A+ L +
Sbjct: 474 ILVLSNGEKFPPSDIENALLQDPLFEQAIVVGEGQSYLAALLVLDGEAWQALAQSLGLDP 533
Query: 447 ADASELSKEKTIS 459
+ L ++KT+
Sbjct: 534 MRSDSL-QDKTLQ 545
>gi|429748961|ref|ZP_19282118.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 332 str. F0381]
gi|429169511|gb|EKY11261.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 332 str. F0381]
Length = 599
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 130/415 (31%), Positives = 214/415 (51%), Gaps = 48/415 (11%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 118
DD+ T +YTSGTTG PKGVMLT++NL Q+ + + ++ D L LP HV+ERA
Sbjct: 181 DDLFTIIYTSGTTGQPKGVMLTYENLAFQMVGHSERLAVDDSDSSLCFLPLSHVFERAWT 240
Query: 119 YFIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 177
F + + + Y + N +++ L +P M +VP YE +++ + + SS +RV+
Sbjct: 241 CFCLYKCVPVYYLSDTNKVREALAEVRPTLMCAVPRFYEKIFATVHDRADASSFVKRVLF 300
Query: 178 RALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVY 237
+A ++ A K E +PS+ WL + L +KLVY
Sbjct: 301 KAAVKTGKRMIALKEANE---------KPSF------WLQQT---------YNLFDKLVY 336
Query: 238 KKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLG 296
K++ A+G K GG +L I F+++IG+ V++GYG+TE++ I+ L
Sbjct: 337 SKLKEALGGRIKFMPCGGANLEPSIGRFFQSIGINVKLGYGMTETTATISCWGDDKFDLQ 396
Query: 297 SVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNT 356
SVG + + +I+I E NE+L V+G VM+GY+KNP T + DG+L T
Sbjct: 397 SVGEVMPNVQIRI--GEENEIL---------VKGGMVMKGYYKNPEETAKVFTNDGYLRT 445
Query: 357 GDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVV 416
GD G + +++ V + E R K+ + S G+ + P +E + +LI QI V
Sbjct: 446 GDAGNLDGNNN---------VFITE-RIKELMKTSNGKYIAPQHIEGKVGKYTLIEQIAV 495
Query: 417 IGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE-KTISLLYGELRKWTS 470
I +R A+IVP+ E + K L+I + + ++L K+ + I + +L+K+ S
Sbjct: 496 IADGKRFVSALIVPNFEALSQVMKELNIKYKNTADLLKQSQVIEYISKQLQKFQS 550
>gi|456352266|dbj|BAM86711.1| long-chain-fatty-acid-CoA ligase [Agromonas oligotrophica S58]
Length = 623
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 124/378 (32%), Positives = 197/378 (52%), Gaps = 48/378 (12%)
Query: 55 TIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYE 114
+I +D+A VYTSGTTG PKGVML+H N++ +++++ + A+ D FLS LP H +E
Sbjct: 190 SIAPEDLAAIVYTSGTTGRPKGVMLSHDNVVSNLKAIHQRLVADGDDVFLSFLPLSHTFE 249
Query: 115 RACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAA 172
R GY+ + G + Y +V+ L DDL +P +ISVP +YE +YS + ++A
Sbjct: 250 RTAGYYYPVAIGASVAYARSVKQLSDDLMEVRPTILISVPRIYERIYSVVMHHRAVANA- 308
Query: 173 RRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLA 232
+ RAL+ ++ A + + TR ++L+D WP L
Sbjct: 309 ---IERALLDLTIAIGGRRFDAQHGRGTR--------LSLLD--------RAAWP---LL 346
Query: 233 EKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPT 291
++LV K+ + G + VSGG + + + A+G++V GYG+TE+SPV++ P
Sbjct: 347 KRLVADKVLNRFGGRLQVAVSGGAPIAEPVVRLFLALGLEVLQGYGMTETSPVVSVNTPD 406
Query: 292 CNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDED 351
N +VG + E++I G+ + VRG+ VM Y+ P T + + D
Sbjct: 407 DNDPRTVGRALPGIEVRI-----------GANDELMVRGANVMLAYWHRPEETARVKEAD 455
Query: 352 GWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLI 411
GWL+TGD ++R G + + GR KD +V STGE + P +LE A L L
Sbjct: 456 GWLHTGD-----------QARIDQGRITITGRIKDILVTSTGEKIAPADLETAILTDPLF 504
Query: 412 RQIVVIGQDQRRPGAIIV 429
Q +VIG+++ AI+V
Sbjct: 505 EQAIVIGENRPFLAAIVV 522
>gi|448570160|ref|ZP_21639154.1| acyl-CoA synthetase [Haloferax lucentense DSM 14919]
gi|445723461|gb|ELZ75103.1| acyl-CoA synthetase [Haloferax lucentense DSM 14919]
Length = 666
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 131/391 (33%), Positives = 190/391 (48%), Gaps = 58/391 (14%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLY----------DIVPAENGDKFLSMLP 108
DD+A+ +YTSGTTG PKGV LTH N + Y D G LS LP
Sbjct: 207 DDLASLIYTSGTTGQPKGVRLTHWNFRSNVNESYRRFGPRPDKGDTPVIGPGAVALSFLP 266
Query: 109 PWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQI 166
HV+ER G+F+ F+ G + Y + L++D Q +P SVP VYE LY I+ Q
Sbjct: 267 LAHVFERMAGHFMMFAAGATVAYAESPDTLREDFQLVRPTVGTSVPRVYEKLYDAIRAQA 326
Query: 167 FTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILW 226
S A +RV A + + AY P YL L
Sbjct: 327 SESPAKKRVFEWA-VGVGQAY-------------HTTDAPGYL---------------LT 357
Query: 227 PLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVI 285
H LA++LV+ +++ A+G + +SGGGSL + Y A+G+ + GYGLTE+SPV+
Sbjct: 358 AKHRLADRLVFGQVRDALGGNLDFFISGGGSLSAELCALYHAMGLPIYEGYGLTETSPVV 417
Query: 286 AARRPTCNVLGSVGHPINHTEIKIVDAETNEVL--PAGSKGIVKVRGSQVMQGYFKNPSA 343
+ P + ++G+P+ + E K+ + L G G + VRG V +GY+ +P
Sbjct: 418 SVNPPEAPKISTIGYPLRNVETKLDTTVVGDQLGEAGGEVGELLVRGPSVTEGYWNDPEE 477
Query: 344 TKQALDEDG----WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPL 399
T+ A ED W TGD+ RR G + RAK +VLSTG+NV P
Sbjct: 478 TEAAFVEDDEGRRWFRTGDV----------VERRPDGYIAFRERAKQILVLSTGKNVAPG 527
Query: 400 ELEEAALRSSLIRQIVVIGQDQRRPGAIIVP 430
+E+A S ++ Q +V+G ++ A+IVP
Sbjct: 528 PIEDAFASSPVVEQCMVLGDGRKFVSALIVP 558
>gi|448727043|ref|ZP_21709420.1| acyl-CoA synthetase [Halococcus morrhuae DSM 1307]
gi|445792243|gb|EMA42854.1| acyl-CoA synthetase [Halococcus morrhuae DSM 1307]
Length = 643
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 131/422 (31%), Positives = 209/422 (49%), Gaps = 55/422 (13%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLY----------DIVPAENGDKFLSMLP 108
DD+A+ VYTSGTTG PKGV LTH+N + +Y D+ + LS LP
Sbjct: 206 DDLASLVYTSGTTGQPKGVRLTHRNFKANVDQVYRRFGPREDKGDLPTIDPSASTLSFLP 265
Query: 109 PWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQI 166
HV+ER G+F+ F+ G + Y + L++D P SVP VYE LY I++Q
Sbjct: 266 LAHVFERLAGHFLMFAAGATVAYAESPDTLQEDFPLVTPSTGTSVPRVYEKLYDSIREQA 325
Query: 167 FTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILW 226
S R+ A + + Y +R G L +
Sbjct: 326 GESPLRERIFEWA-VDVGREYQ--QRESPGLSLRAKRA---------------------- 360
Query: 227 PLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVI 285
LA++LV+++++ +G + + +SGGGSL + ++ +G+ + GYGLTE++PV+
Sbjct: 361 ----LADRLVFEQVREGVGGNIEFFISGGGSLSPELGRLFDGMGLPILEGYGLTETAPVV 416
Query: 286 AARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA-GSKGIVKVRGSQVMQGYFKNPSAT 344
A P +G++G P+ EIK+ + + L A G G + VRG V GY++NP AT
Sbjct: 417 AVNPPEAPEIGTIGPPVVDEEIKVDASVVPDDLDADGEVGELLVRGPNVTDGYWENPEAT 476
Query: 345 KQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEA 404
+ + D + W TGD+ RR G + R+K +VLSTG+NV P +E+A
Sbjct: 477 EDSFDGE-WFRTGDV----------VERRPDGYIAFRERSKQLLVLSTGKNVAPGPIEDA 525
Query: 405 ALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI-VHADASELSKEKTISLLYG 463
+ L+ Q +V+G ++ ++VP++E V A I + D+S L + + + G
Sbjct: 526 FAQRQLVEQCMVLGDGEKFVSGLVVPNEERVRKWAGEEGIDLPEDSSALCQNEHVQARIG 585
Query: 464 EL 465
E+
Sbjct: 586 EV 587
>gi|394990014|ref|ZP_10382846.1| hypothetical protein SCD_02439 [Sulfuricella denitrificans skB26]
gi|393790279|dbj|GAB72485.1| hypothetical protein SCD_02439 [Sulfuricella denitrificans skB26]
Length = 554
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 116/372 (31%), Positives = 191/372 (51%), Gaps = 55/372 (14%)
Query: 51 YKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPW 110
+K + + + +AT VYTSGTTG PKGVML+H+N+L + + ++V GD +S+LP
Sbjct: 152 FKVQDLDENLLATLVYTSGTTGRPKGVMLSHRNILSNVAAALEVVSLHPGDLLISVLPLS 211
Query: 111 HVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFT 168
H++ER CGY++ G+ + Y ++ L +DL +P M++VP V++ + I+ Q T
Sbjct: 212 HMFERTCGYYVPLKAGVPVAYARSINQLAEDLAFLKPTVMVAVPRVFQRFLARIE-QALT 270
Query: 169 SSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPL 228
+S +R + + ++ + F+R R+ K L L+
Sbjct: 271 ASPLKRALFS--LTVALGWRKFER--------RSGKVEQALFQLL--------------- 305
Query: 229 HLLAEKLVYKKIQSAIG-ISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAA 287
+ LV + + +G + V GG L + + + +G+ + GYGLTE+SP++A
Sbjct: 306 ----QPLVAGPVLNRLGGRMRLAVVGGAPLELRVAQSFIGLGLNMLQGYGLTEASPIVAG 361
Query: 288 RRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQA 347
R N +VG P+ E+++ D G + VRG VM GY+ NP A+ +
Sbjct: 362 NREYDNDPITVGAPLPGVEVRVNDV-----------GELLVRGPSVMLGYWHNPEASAEV 410
Query: 348 LDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALR 407
LD DGWLNTGD+ I ++++GR KD +VLS GE V P + E A L
Sbjct: 411 LDADGWLNTGDLVEIPADK-----------IIIKGRTKDILVLSNGEKVSPQDAEMAILD 459
Query: 408 SSLIRQIVVIGQ 419
L Q++++G+
Sbjct: 460 DPLFEQVMLVGE 471
>gi|448320502|ref|ZP_21509989.1| AMP-dependent synthetase and ligase [Natronococcus amylolyticus DSM
10524]
gi|445605967|gb|ELY59882.1| AMP-dependent synthetase and ligase [Natronococcus amylolyticus DSM
10524]
Length = 661
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 127/397 (31%), Positives = 198/397 (49%), Gaps = 59/397 (14%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNL---LHQIRSLYDIVPAENGD--------KFLSML 107
DD+A+ +YTSGTTG PKGV LTH+N ++Q+R Y P ++ + + +S L
Sbjct: 206 DDLASLIYTSGTTGQPKGVQLTHRNFRSNVNQVRKRYGPRPDKDDELPVIDETVQSVSYL 265
Query: 108 PPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQ 165
P HV+ER G+F+ F+ G + Y + LK+D QP SVP VYE +Y I++Q
Sbjct: 266 PLAHVFERTSGHFLLFASGACVAYAESTDTLKEDFGTVQPDTATSVPRVYEKIYDTIREQ 325
Query: 166 IFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAIL 225
S A +R+ A + Y + P IL
Sbjct: 326 ASESGAKKRIFEWA-TDVGVEY-------------QESDDPG---------------PIL 356
Query: 226 WPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPV 284
LA+KLV+ ++ A+G + +SGGGSL + Y A+G+ + GYGLTE++PV
Sbjct: 357 SAKQSLADKLVFSNVREALGGEIELLISGGGSLSKELCTLYHAMGLPIYEGYGLTETAPV 416
Query: 285 IAARRPTCNVLGSVGHPINHTEIKIVDA--ETNEVLPAGSKGIVKVRGSQVMQGYFKNPS 342
++ P +G++G P+ +++I D+ E G G + V G V QGY+ P
Sbjct: 417 VSVNPPEAPEIGTIGPPLPGVDVRIDDSLVEGETFDDPGEVGELLVSGPNVTQGYWNKPG 476
Query: 343 ATKQAL--DEDG--WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 398
AT ++ D+DG W TGDI + P + R K +VLSTG+NV P
Sbjct: 477 ATTESFLEDDDGSRWFRTGDIVHLRPDD----------YIEFRDRVKQILVLSTGKNVAP 526
Query: 399 LELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 435
+E+A S ++ Q +V+G ++ GA++VP+ + +
Sbjct: 527 GPIEDAFAASEVVEQCMVVGDGKKFVGALLVPNTDHI 563
>gi|350561364|ref|ZP_08930203.1| AMP-dependent synthetase and ligase [Thioalkalivibrio
thiocyanoxidans ARh 4]
gi|349781471|gb|EGZ35779.1| AMP-dependent synthetase and ligase [Thioalkalivibrio
thiocyanoxidans ARh 4]
Length = 630
Score = 184 bits (468), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 140/444 (31%), Positives = 218/444 (49%), Gaps = 62/444 (13%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 118
D +A+ VYTSGT+G PKGVML+H+N L + D V + D+ LS LP H ER G
Sbjct: 204 DTLASIVYTSGTSGRPKGVMLSHRNFLSNAHACLDAVAVSSADRLLSFLPLSHTLERTVG 263
Query: 119 YFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 176
Y+ S GI Y +V L +DL + +P +I+VP V+E +++ I + +S RR +
Sbjct: 264 YYAAVSAGIATAYARSVTRLAEDLVQVRPTILIAVPRVFERMHARILGHVSAASPTRRRL 323
Query: 177 ARALIRISFAYTAFKRIYE-GFC-LTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEK 234
F R E G+ Q++ + AL+ LH L +
Sbjct: 324 -------------FDRAQELGWRRFLHAQRRGRWSPALL--------------LHPLLDP 356
Query: 235 LVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCN 293
+V ++++ +G + +SGG LP + F+ A GV V GYGLTE+SPVIA R N
Sbjct: 357 VVGARVRARLGGRLRFAISGGAPLPEAVGRFFIACGVPVLQGYGLTETSPVIAVNRLEDN 416
Query: 294 VLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGW 353
+VG + E++I E +E+ R VM GY+ + AT+ ALD DGW
Sbjct: 417 EPATVGPALPGVEVRI--GEHDELC---------TRSPSVMAGYWNDRHATRAALDADGW 465
Query: 354 LNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQ 413
L+TGD I P G + + GR KD +VLS GE V P ++E+A + + Q
Sbjct: 466 LHTGDQARIGPR----------GHITITGRLKDILVLSNGEKVAPADVEQALAGTPWVEQ 515
Query: 414 IVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTI----SLLYGELRKWT 469
++VIG+ + A++V + A+ + A A+ +T+ +++ L+
Sbjct: 516 VMVIGEGRPFLAALVVLRAGALPGLARAAGLDPAPAATHDGARTLRRKPAVVAEVLKALQ 575
Query: 470 SKCS-----FQIGPIHVVDEPFTV 488
+ + Q+ +VDEP+TV
Sbjct: 576 PRLAQFPGYLQLRAAVLVDEPWTV 599
>gi|399577910|ref|ZP_10771662.1| amp-forming long-chain acyl-CoA synthetase [Halogranum salarium
B-1]
gi|399237352|gb|EJN58284.1| amp-forming long-chain acyl-CoA synthetase [Halogranum salarium
B-1]
Length = 658
Score = 184 bits (468), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 146/466 (31%), Positives = 220/466 (47%), Gaps = 64/466 (13%)
Query: 46 DARKHYKYET----IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLY--------- 92
DA YET DD+A+ +YTSGTTG PKGV LTH+N + +
Sbjct: 197 DAYDADAYETWVDEPAMDDLASLIYTSGTTGQPKGVQLTHRNFRANVNQCFRRFGPRPDD 256
Query: 93 -DIVPAENGDKFLSMLPPWHVYERACG-YFIFSRGIELMYT-AVRNLKDDLQRYQPHYMI 149
D + LS LP HV+ER G Y +F+ G + Y + L++D Q +P
Sbjct: 257 PDRLAITPDSTTLSFLPLAHVFERLAGHYLMFAAGATVAYAESPDTLREDFQLVRPTTGT 316
Query: 150 SVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYL 209
SVP VYE LY I+ Q S R+ A + + AY G LT
Sbjct: 317 SVPRVYEKLYDAIRTQASESPVKERIFEWA-VGVGQAYHEVDN--PGTALTLK------- 366
Query: 210 VALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAI 268
H +A++LV+ +++ AIG + +SGGGSL + Y +
Sbjct: 367 -------------------HRIADRLVFSQVREAIGGRLEFFISGGGSLSADLCALYHGM 407
Query: 269 GVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVL---PAGSKGI 325
G+ + GYGLTE+SPV++ P +G++G P+ EI+I ++ EV G G
Sbjct: 408 GLPILEGYGLTETSPVVSVNPPNGPKIGTIGTPVVDVEIEIDESVVGEVQRRETEGQVGE 467
Query: 326 VKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAK 385
+ V+G V GY+ P T+Q+ E GW TGDI + P G + RAK
Sbjct: 468 LLVKGPNVTSGYWNRPEETEQSFTE-GWFRTGDIVHLRPD----------GYIEFRERAK 516
Query: 386 DTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI- 444
+VLSTG+NV P +E+A + L+ Q +V+G ++ A++VP+ E V A R I
Sbjct: 517 QLLVLSTGKNVAPGPIEDAFASNQLVEQCLVLGDGKKFVSALLVPNVEAVHEWADREGID 576
Query: 445 VHADASELSKEKTI-SLLYGELRKWTSKCSF--QIGPIHVVDEPFT 487
+ D +L++++ + + L E+ + + QI +V E FT
Sbjct: 577 LPEDRRKLARDERLRARLQREVDQVNERLESYEQIKQFRIVTEEFT 622
>gi|54026677|ref|YP_120919.1| acyl-CoA synthetase [Nocardia farcinica IFM 10152]
gi|54018185|dbj|BAD59555.1| putative acyl-CoA synthetase [Nocardia farcinica IFM 10152]
Length = 597
Score = 184 bits (468), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 135/426 (31%), Positives = 206/426 (48%), Gaps = 66/426 (15%)
Query: 16 PDIVE--EIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGN 73
PD+ E +I + D++I+ G+ D +D H + + +G+ AT +YTSGTTG
Sbjct: 142 PDLAEIVQIDKGAVDDLIERGK-------DLDDQVVHERRKQVGASSPATLIYTSGTTGR 194
Query: 74 PKGVMLTHKNLLHQIRSLYDIVP----AENGDKFLSMLPPWHVYERACGYFIFSRGIELM 129
PKGVML+H NL + S D + G K L LP HV+ RA F + +
Sbjct: 195 PKGVMLSHANLWAE--STADRIALGKYVTEGKKTLMFLPLAHVFARAVALAAFDAKVIVA 252
Query: 130 YTAV-RNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYT 188
+T+ L D ++PH+++SVP V+E +++G +++ + A A I ++
Sbjct: 253 HTSDWTTLVDQFGAFKPHFILSVPRVFEKVFNGAKQKAHDGGKGKIFDAAAATAIEYSEA 312
Query: 189 AFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS- 247
+ P ++ L H L +KLVY K+++A+G
Sbjct: 313 ------------LDNGGPGLVLKL---------------KHALFDKLVYSKLKTALGGQC 345
Query: 248 KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEI 307
+A VSGGG L + F+ +GV + GYGLTE++ + P +GSVG PI
Sbjct: 346 EAAVSGGGPLGARLGHFFRGVGVTIYEGYGLTETTAAFSVNTPEHIRVGSVGRPIEGHAA 405
Query: 308 KIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHS 367
KI AE E+L +RG V GY+ N +AT++A DGW TGD+G I
Sbjct: 406 KI--AEDGELL---------LRGPVVFNGYWGNEAATEEAF-ADGWFKTGDLGAI----- 448
Query: 368 RGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAI 427
G + + GR K+ IV + G+NV P LE++ LI Q++V+G Q GA+
Sbjct: 449 -----DADGFITITGRKKEIIVTAGGKNVSPALLEDSLRAHPLISQVMVVGDGQPFIGAL 503
Query: 428 IVPDKE 433
I D E
Sbjct: 504 ITLDPE 509
>gi|319940752|ref|ZP_08015093.1| AMP-dependent synthetase and ligase [Sutterella wadsworthensis
3_1_45B]
gi|319805812|gb|EFW02586.1| AMP-dependent synthetase and ligase [Sutterella wadsworthensis
3_1_45B]
Length = 609
Score = 184 bits (467), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 131/388 (33%), Positives = 202/388 (52%), Gaps = 44/388 (11%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 118
DD+A +YTSGTTG PKGVMLTH+N++ +++ + V + GD FLS LP H +ER G
Sbjct: 184 DDLAGIIYTSGTTGRPKGVMLTHRNIVSNVKATLECVSPKVGDTFLSFLPLSHTFERTAG 243
Query: 119 YFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 176
Y++ + G + Y +V L +DL+ +P +ISVP VYE +Y+ +Q ++ S R +
Sbjct: 244 YYLALATGCIIAYNRSVLLLAEDLKTIKPTVIISVPRVYERIYARVQDKLRKS----RPI 299
Query: 177 ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLV 236
A+ L F + A + + FC R P WL I+ A L LH +A L
Sbjct: 300 AKKL----FDW-AVEVGWRDFC--RKNHLPVEKSGR-SWL-DGIVRATL--LHKMANTL- 347
Query: 237 YKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLG 296
+ G + +SGG +L + + +G+ + GYG+TE+SP+IA N
Sbjct: 348 ---LSQFGGRLRIAISGGAALNHKVARTFCGLGLPIIQGYGMTEASPIIAGNCVEFNQPD 404
Query: 297 SVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNT 356
+VG P + EI++ E NE ++VR +M+GY+ P T A +DGWL T
Sbjct: 405 TVGKPFCNVEIRL--GEGNE---------IQVRAPSIMKGYWHRPEDTAAAFTKDGWLKT 453
Query: 357 GDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVV 416
GD+G G+L ++GR K+ IV STGE + P +LE A L Q +
Sbjct: 454 GDVG----------EFNADGMLKIKGRIKEIIVTSTGEKIPPADLESAIETDPLFAQAYI 503
Query: 417 IGQDQRRPG--AIIVPDKEEVLMAAKRL 442
+G+++ G A++ P++ L A+ L
Sbjct: 504 VGENKPYLGLLAVVEPNEWASLAASLNL 531
>gi|302868999|ref|YP_003837636.1| AMP-dependent synthetase and ligase [Micromonospora aurantiaca ATCC
27029]
gi|302571858|gb|ADL48060.1| AMP-dependent synthetase and ligase [Micromonospora aurantiaca ATCC
27029]
Length = 600
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 129/409 (31%), Positives = 201/409 (49%), Gaps = 53/409 (12%)
Query: 31 IDLG--RESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI 88
IDLG + A + + A + + +DD+AT +YTSGTTG PKG +LTH+N+ I
Sbjct: 150 IDLGAVDDLVAAGASVDRAEVETRRSLLKADDVATIIYTSGTTGRPKGCVLTHRNIYSDI 209
Query: 89 RSLYDIVPA--ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQP 145
+ ++P G L LP H + R + + + A +NL +LQ ++P
Sbjct: 210 ANAVPVLPNLFRQGASTLLFLPLAHAFARLIQVGVVHARATMAHCADTKNLVAELQDFKP 269
Query: 146 HYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQ 205
+++SVP V+E +Y+G +Q S ++ RA +++ A++ + + G L
Sbjct: 270 TFVLSVPRVFEKVYNG-ARQKAESEGKGKIFDRAE-KVAIAWSEAQELPGGPGLG----- 322
Query: 206 PSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIG-ISKAGVSGGGSLPMHIDLF 264
L H L +KLVY+K+++A+G + + +SGG L + F
Sbjct: 323 -------------------LRAQHALFDKLVYRKLRAAMGGLCRDAISGGAPLGARLGHF 363
Query: 265 YEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKG 324
+ +GV + GYGLTE+SP AA PT +G+VG P+ I+I D G
Sbjct: 364 FRGVGVTICEGYGLTETSPAAAANLPTGTRIGTVGRPLPGVTIRIDD-----------DG 412
Query: 325 IVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRA 384
V + G V QGY+ N +AT +A+ DGW TGD+G + G L + GR
Sbjct: 413 EVLIAGDIVFQGYWHNDAATAEAISTDGWFRTGDLGHLDDD----------GYLSITGRK 462
Query: 385 KDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 433
K+ IV + G+NV P LE+ LI Q VV+G Q A++ D+E
Sbjct: 463 KEIIVTAGGKNVAPAVLEDQVRAHPLISQCVVVGDRQPFIAALVTIDEE 511
>gi|448739566|ref|ZP_21721578.1| AMP-dependent synthetase and ligase [Halococcus thailandensis JCM
13552]
gi|445799185|gb|EMA49566.1| AMP-dependent synthetase and ligase [Halococcus thailandensis JCM
13552]
Length = 653
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 134/431 (31%), Positives = 211/431 (48%), Gaps = 70/431 (16%)
Query: 58 SDDIATYVYTSGTTGNPKGVMLTHKNL---LHQIRSLYDIVPAENGD--------KFLSM 106
SDD+A+ +YTSGTTG PKGV +TH+N ++Q+R + P ++ D LS
Sbjct: 206 SDDLASLIYTSGTTGKPKGVRMTHRNFRANINQLRKRFGDRPDKSADLPSVGRETVALSF 265
Query: 107 LPPWHVYERACG-YFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQK 164
LP HV+ER G +F+F+ G + Y + + +D++ QP SVP +YE ++ +++
Sbjct: 266 LPLAHVFERLAGHFFLFASGATVAYAESADTVAEDIRTVQPTTATSVPRIYERIFDSMRE 325
Query: 165 QIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAI 224
S+ RR+ RA+ A KR T + P +
Sbjct: 326 DA-DSAIRRRIFERAV-------AAAKR-------TSRRDDPGRTLRF------------ 358
Query: 225 LWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSP 283
LA++LVY ++ A+G + + +SGGGSL + ++ + + + GYGLTE++P
Sbjct: 359 ---ERALADRLVYSTVKEAMGGNIEFFISGGGSLSPELARLFDGMDLPIYEGYGLTEAAP 415
Query: 284 VIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA------GSKGIVKVRGSQVMQGY 337
V++ P G++G + E ++ DA VLPA G G + VRG V GY
Sbjct: 416 VVSVNPPEAPKPGTLGPALTGVETRL-DAS---VLPADQYDRDGDVGELLVRGPNVTDGY 471
Query: 338 FKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVE 397
++NP T ++DGWL TGDI R G V R K +VLSTG+NV
Sbjct: 472 WENPEETDADFEDDGWLRTGDIV----------ERDVDGYFVYHERLKQLLVLSTGKNVA 521
Query: 398 PLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKT 457
P +E+A S + Q +V+G D++ A++VP+ E + A R ++ EL E+
Sbjct: 522 PGPIEDAFATSERVEQAMVLGDDEKFVSALVVPNFEGLRAWAARKNV------ELPSERA 575
Query: 458 ISLLYGELRKW 468
R+W
Sbjct: 576 ALCRDENAREW 586
>gi|441505110|ref|ZP_20987100.1| Long-chain-fatty-acid--CoA ligase [Photobacterium sp. AK15]
gi|441427211|gb|ELR64683.1| Long-chain-fatty-acid--CoA ligase [Photobacterium sp. AK15]
Length = 607
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 139/447 (31%), Positives = 211/447 (47%), Gaps = 54/447 (12%)
Query: 17 DIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKG 76
++ E V SYD+ + G S A + DD+ T +YTSGTTG PKG
Sbjct: 143 ELAEHPLVCSYDDFVQQG-------SGDAQAELEQRLSQTAMDDLFTLIYTSGTTGTPKG 195
Query: 77 VMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSR-GIELMYTAVRN 135
VML + N+ QI + + + GD L LP HV+ERA ++ R G+ +
Sbjct: 196 VMLDYGNVAGQIEGHDEKLALDEGDVSLCFLPLSHVFERAWTFYALHRGGVNCYLSDTNK 255
Query: 136 LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYE 195
L++ L +P+ M +VP VYE +YS + +++ + R+V+ ++A R+
Sbjct: 256 LREALVEVKPNVMAAVPRVYEKIYSAVHEKVSRAPFHRKVM------FTWAVNMGARM-- 307
Query: 196 GFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGG 254
C + Q++PS L L + LA+KLV K++ +G K GG
Sbjct: 308 ALC-HQEQRKPSLL---------------LKKSYKLADKLVLSKLRKILGGQIKFMPCGG 351
Query: 255 GSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAET 314
L I F+ AIG+ V++GYG+TE++ I+ C S+G P+ E+KI E
Sbjct: 352 AKLDAGIGRFFHAIGINVKLGYGMTETTATISCWDDECFNPDSIGLPMPGAEVKI--GEN 409
Query: 315 NEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRC 374
NE+L VRG VM+GY+K P + + EDG+L TGD G
Sbjct: 410 NEIL---------VRGPMVMRGYYKMPEESAKNFTEDGFLKTGDAGHFDDK--------- 451
Query: 375 GGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEE 434
G L + R K+ + S G+ + P +E A + I QI VI ++ A+IVP E
Sbjct: 452 -GNLFITDRIKELMKTSGGKYIAPQVIEGAIGKDHFIEQIAVIADTRKFVSALIVPCFEA 510
Query: 435 VLMAAKRLSIVHADASELSKEKTISLL 461
+ A+ L+I + D EL K I L
Sbjct: 511 LEEHARELNIKYHDRLELVKHSQIREL 537
>gi|346226769|ref|ZP_08847911.1| amp-dependent synthetase and ligase [Anaerophaga thermohalophila
DSM 12881]
Length = 639
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 147/517 (28%), Positives = 250/517 (48%), Gaps = 71/517 (13%)
Query: 4 IILLWGKKSSVAPDIVEEIP----VFSYDEIIDLGRES---RKAFSDSNDARKHYKYET- 55
+IL+ G + I++E+P + +D++ +L + ++ ND K + +T
Sbjct: 107 MILVSGYQLHKIRQIIDELPGVEKIIVFDDVTELSPKEVLLSDVYAAGNDFLKINREKTE 166
Query: 56 -----IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPW 110
+ +DIA YTSGTT PKG+ML+H+N + + + + L +LP
Sbjct: 167 ARRKEVHYNDIANISYTSGTTARPKGIMLSHRNYTANVEQAFSYIDIPAHYRTLVVLPWD 226
Query: 111 HVYERACGYFIFS-RG-----IELMYTAVRNLKD---DLQRYQPHYMISVPLVYETLYSG 161
H + + F RG +E T + LK+ ++ QPH ++SVP + +
Sbjct: 227 HAFAHTAALYAFMYRGASIASVEAGKTQIETLKNFASNILEIQPHVLMSVPAIAKNFRKN 286
Query: 162 IQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARII 221
I+K + A+ A L +I+ Y + Y G T N + + +
Sbjct: 287 IEKGVM----AKGKTANTLFKIAMKYAIW---YNG---TGNNR-------------GKGL 323
Query: 222 CAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDL--FYEAIGVKVQVGYGLT 279
+ +PL+ L + +++K I+S G + GGG+L + IDL F+ A+G+ + GYGL+
Sbjct: 324 KKLTYPLYQLFDNILFKTIRSGFGGNLQFFIGGGAL-LDIDLQKFFYALGIPMYQGYGLS 382
Query: 280 ESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFK 339
E++P+I+A P + +GS G +N+ EIKI D E NE LP G G + V+G VM GY+K
Sbjct: 383 EAAPIISANTPDHHKMGSSGRVVNNLEIKICDEEGNE-LPNGRSGEIVVKGENVMPGYWK 441
Query: 340 NPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPL 399
N ATK+ + +DGWL TGD+G++ G L + GR K ++ S GE P
Sbjct: 442 NEEATKETI-KDGWLYTGDLGYLDHE----------GYLYVLGRFKSLLIGSDGEKYSPE 490
Query: 400 ELEEAAL-RSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTI 458
+EEA + LI Q V+ +IVP++E+++ K L + +L E+T+
Sbjct: 491 GIEEAVIDHCPLIDQFVLHNNQNPYTVGLIVPNQEKIIQFFKSLDENLTEDQKL--EETL 548
Query: 459 SLLYGELRKWTSKCSFQI--------GPIHVVDEPFT 487
+ +L ++ + + ++ EPFT
Sbjct: 549 KAVESQLAQFKKGGKLENMFPQRWLPAAVIILPEPFT 585
>gi|383789327|ref|YP_005473901.1| AMP-forming long-chain acyl-CoA synthetase [Spirochaeta africana
DSM 8902]
gi|383105861|gb|AFG36194.1| AMP-forming long-chain acyl-CoA synthetase [Spirochaeta africana
DSM 8902]
Length = 645
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 128/391 (32%), Positives = 192/391 (49%), Gaps = 51/391 (13%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 118
DDI T YTSGTTGNPKG+ML H+N + ++ G + L +LP H + G
Sbjct: 187 DDIVTVSYTSGTTGNPKGIMLMHRNYIANSSEAIEVFRIPAGYQTLLILPCDHSFAHTVG 246
Query: 119 -----------YFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIF 167
YF+ +RG + +RN+ +L P ++++VP + IQ +
Sbjct: 247 IYASLVAGISLYFVDARGGSM--AILRNIPGNLVETDPTFLLTVPALTGNFMKKIQNGVA 304
Query: 168 TSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWL-WARIICAILW 226
+ + IR A R +G+ Q +L +L W
Sbjct: 305 AKGSFVNGIFERGIRAGIA-----RNGDGY------HQVPFLTRARHFLPW--------- 344
Query: 227 PLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVI 285
LLAE LV++K+++ G K VSGG L + F+ A+G+ V GYG+TE+SP+I
Sbjct: 345 ---LLAELLVFRKVRTIFGKKVKFCVSGGALLDLGQQQFFHALGLPVYQGYGMTEASPII 401
Query: 286 AARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATK 345
++ P C LG+ G P ++K+V + +E P G KG + VRG VM+GY KNP AT+
Sbjct: 402 SSNHPWCYKLGTSGKPFPTVQVKVVLQDGSEAAP-GEKGQICVRGPNVMKGYLKNPDATE 460
Query: 346 QALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAA 405
+AL DGWL+TGD+G++ G L + GR K ++ + GE P E+EE
Sbjct: 461 EAL-RDGWLHTGDLGFL----------DADGFLTVSGREKALLISADGEKYSPEEIEEVM 509
Query: 406 LRSS-LIRQIVVIGQDQRRPGAIIVPDKEEV 435
+ I Q ++ R GA+IVPD + V
Sbjct: 510 TTACPYISQAMLYNDHNRFTGALIVPDTDAV 540
>gi|332876876|ref|ZP_08444630.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 329 str. F0087]
gi|332685159|gb|EGJ58002.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 329 str. F0087]
Length = 597
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 131/436 (30%), Positives = 223/436 (51%), Gaps = 50/436 (11%)
Query: 40 AFSDSN--DARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPA 97
AF ++N D + ++ D+ T +YTSGTTG PKGVMLT++NL +Q+ +
Sbjct: 158 AFGNNNALDEELQQRIDSRDLSDLFTVIYTSGTTGEPKGVMLTYENLAYQMLGHSQRLEV 217
Query: 98 ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNL-KDDLQRYQPHYMISVPLVYE 156
++ D LS LP HVYERA F + I + Y NL ++ L +P M +VP YE
Sbjct: 218 DDTDSSLSFLPLTHVYERAWTSFCLYKAIVVYYLEDTNLVREALAEVRPTLMCAVPRFYE 277
Query: 157 TLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWL 216
+++ + + SS A+R++ + ++ +R+ L ++PS+L
Sbjct: 278 KIFATVHDKADASSFAKRMLFKLAVKTG------RRV---LTLKEQNRKPSFL------- 321
Query: 217 WARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVG 275
L + +K+VY K+++ +G K GG +L I F+++IG+ V++G
Sbjct: 322 --------LKKAYNFFDKMVYTKLKAVLGGRIKFMPCGGANLEPSIGRFFQSIGINVKLG 373
Query: 276 YGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQ 335
YG+TE++ ++ L SVG + + +++I E NE+L V+G VM+
Sbjct: 374 YGMTETTATVSCWGDNRFNLQSVGTLMPNVQVRI--GEDNEIL---------VKGGMVMK 422
Query: 336 GYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGEN 395
GY+KNP T +A DG+L TGD G I +++ L + R K+ + S G+
Sbjct: 423 GYYKNPEETAKAFTPDGFLRTGDAGKIDENNN----------LFITERIKELMKTSNGKY 472
Query: 396 VEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE 455
+ P +E + +LI QI VI ++ A+IVP+ E + A K L+I + + ++L K
Sbjct: 473 IAPQLIEGKVGKYNLIEQIAVIADGKKFVSALIVPNYEILTQAFKDLNIKYKNTADLIKH 532
Query: 456 -KTISLLYGELRKWTS 470
+ I + +L+K+ S
Sbjct: 533 SQVIEYIGKQLQKFQS 548
>gi|262275041|ref|ZP_06052852.1| long-chain-fatty-acid--CoA ligase [Grimontia hollisae CIP 101886]
gi|262221604|gb|EEY72918.1| long-chain-fatty-acid--CoA ligase [Grimontia hollisae CIP 101886]
Length = 597
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 145/498 (29%), Positives = 230/498 (46%), Gaps = 69/498 (13%)
Query: 5 ILLWGKKSSV--APDIVEEIP----VFSYDEIIDLG--------RESRKAFSDSNDARKH 50
IL G +S V A I + P + S+D+ +D R + +D+ D +
Sbjct: 109 ILFVGDQSQVDAAMSIADSCPSLEKIVSFDDNVDFAGHAMGMGWRCFLQTANDNVDPEFN 168
Query: 51 YKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPW 110
+ DD+ T +YTSGTTG PKGVML + N+ QI S ++ + L+ LP
Sbjct: 169 KRLADAAMDDLMTLIYTSGTTGEPKGVMLDYANIAAQIESHDQVLGISENEVSLAFLPLS 228
Query: 111 HVYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTS 169
HV+ER +++ G Y + +++ LQ +P M +VP YE +YS + +++ T+
Sbjct: 229 HVFERCWTFYVLHHGATNCYLSNTYAIREALQDVKPTVMCAVPRFYEKIYSAVHEKVATA 288
Query: 170 SAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLH 229
+ ++ + RA + I +TR K+P+ WL + H
Sbjct: 289 NPVKKGMFRAAVSIGNLMAE---------ITRKGKKPA------PWLKS---------AH 324
Query: 230 LLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAAR 288
+A+KLV K++ +G + + GG L I F+ AIGV V++GYG+TE++ ++
Sbjct: 325 RMADKLVLSKLRELLGGNITMMPCGGAKLEPAIGRFFHAIGVNVKLGYGMTETTATVSCW 384
Query: 289 RPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQAL 348
S+G P+ + E+KI E NE+L VRG VM+GY+ P T
Sbjct: 385 DSGSFDPDSIGMPMPNAEVKI--GENNEIL---------VRGPMVMRGYYNKPKETADTF 433
Query: 349 DEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRS 408
+DG+L TGD G I G L + R K+ + S G+ + P +E +
Sbjct: 434 TKDGFLKTGDAGHI----------DAKGNLFITDRIKELMKTSGGKYIAPQMIEGKLGKD 483
Query: 409 SLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISL 460
I QI V+ + A+IVP E + AK L+I + D EL K EK ++
Sbjct: 484 HFIEQIAVVADARHFVSALIVPCFETLESWAKELNIKYHDRMELIKHSEVVELFEKRLAE 543
Query: 461 LYGELRKWTSKCSFQIGP 478
L EL K+ F + P
Sbjct: 544 LQKELAKFEQVKKFTLLP 561
>gi|433592776|ref|YP_007282272.1| AMP-forming long-chain acyl-CoA synthetase [Natrinema pellirubrum
DSM 15624]
gi|448335221|ref|ZP_21524371.1| AMP-dependent synthetase and ligase [Natrinema pellirubrum DSM
15624]
gi|433307556|gb|AGB33368.1| AMP-forming long-chain acyl-CoA synthetase [Natrinema pellirubrum
DSM 15624]
gi|445617602|gb|ELY71196.1| AMP-dependent synthetase and ligase [Natrinema pellirubrum DSM
15624]
Length = 652
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 134/405 (33%), Positives = 201/405 (49%), Gaps = 60/405 (14%)
Query: 52 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI---RSLYDIVPAENGDK------ 102
+ + I DD+A+ +YTSGTTG PKGV LTH N + R + P ++ D
Sbjct: 199 RIDGIDLDDLASLIYTSGTTGKPKGVQLTHWNFRSNVNGSRKRFGPRPDKDDDVPVLDEE 258
Query: 103 --FLSMLPPWHVYERACGYF-IFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETL 158
+S LP HV+ER G+F +F+ G + Y + L++D QP SVP VYE +
Sbjct: 259 SVAMSYLPLAHVFERTAGHFALFAGGTCIAYAESPDTLQEDFSTVQPTTATSVPRVYEKI 318
Query: 159 YSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWA 218
Y GI+++ SS +RR+ A + AY + P
Sbjct: 319 YDGIREEASGSSVSRRIFEWA-TDVGVAY-------------QQAASPG----------- 353
Query: 219 RIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYG 277
IL LA+KLV+ ++ A+G + + +SGGGSL + Y A+G+ + GYG
Sbjct: 354 ----PILKAKQALADKLVFSTVREALGGNIEILISGGGSLSPELCRLYHAMGLPIFEGYG 409
Query: 278 LTESSPVIAARRPTCNVLGSVGHPINHTEIKIVD---AETNEVLPAGSKGIVKVRGSQVM 334
LTE+SP++A P +G++G +++ E+K+ + + AG G + V G V
Sbjct: 410 LTETSPIVATNPPEGAKIGTIGPTLSNVEVKVDEAIADQDAFADDAGEVGELLVNGPNVT 469
Query: 335 QGYFKNPSATKQAL--DEDG--WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVL 390
QGY+ P AT+ A D+DG W TGDI + P G L R K IVL
Sbjct: 470 QGYWNKPGATEGAFTEDDDGTRWFRTGDIIHVRPD----------GYLEFRDRVKQIIVL 519
Query: 391 STGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 435
STG+NV P LE+A S ++ Q +V+G ++ GA++VP+ V
Sbjct: 520 STGKNVAPGPLEDAFAASEVVEQAMVVGDGEKFIGALLVPNTNHV 564
>gi|197118507|ref|YP_002138934.1| AMP-forming acyl-CoA synthetase [Geobacter bemidjiensis Bem]
gi|197087867|gb|ACH39138.1| acyl-CoA synthetase, AMP-forming [Geobacter bemidjiensis Bem]
Length = 603
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 135/407 (33%), Positives = 194/407 (47%), Gaps = 55/407 (13%)
Query: 62 ATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPA-ENGDKFLSMLPPWHVYERACGYF 120
AT +YTSGTTG PKG +LTH NL+ + + D V D FLS LP HV+ER+ GY+
Sbjct: 184 ATIIYTSGTTGTPKGAVLTHGNLVFDVWATLDKVGGVGQEDLFLSFLPLSHVFERSVGYY 243
Query: 121 I-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 178
+ S G + + ++ + +++ P M+ VP +E +YS I + + S +R + R
Sbjct: 244 LPLSCGAAIAFADSMEKISENMMELHPTIMVCVPRFFEKIYSRIYEAVHQLSLFKRKMFR 303
Query: 179 ALIRI--SFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLV 236
+ + S+ Y + Y F L+ H +A++LV
Sbjct: 304 RALAVGRSYVYARYIDKYVPFWLSFQ--------------------------HAIADRLV 337
Query: 237 YKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVL 295
+ K++S G K SGG L I+ F+ IGV V GYGLTE+SPV+ +
Sbjct: 338 FSKLRSRFGDRLKFCASGGAPLDREINEFFWIIGVPVFEGYGLTETSPVLCSNSYNGLRF 397
Query: 296 GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLN 355
GSVG P+ TEI I G V RG QVM GY+ + +ATK+AL DGW
Sbjct: 398 GSVGTPLAFTEIAI-----------AGDGEVLARGPQVMAGYYNDEAATKEAL-VDGWFR 445
Query: 356 TGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIV 415
TGDIG R G L + R KD IV + G+N+ P +E R I Q
Sbjct: 446 TGDIG-----------RLEEGFLYITDRKKDLIVTAGGKNIAPQPIENLLKRDKYISQAY 494
Query: 416 VIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLY 462
V G + A++VP E +L A+ I + D +L + + LY
Sbjct: 495 VYGDRKPYLTALLVPTLERLLEFAQERRIAYHDLEDLVVHQPVIELY 541
>gi|448584787|ref|ZP_21647530.1| acyl-CoA synthetase [Haloferax gibbonsii ATCC 33959]
gi|445727641|gb|ELZ79251.1| acyl-CoA synthetase [Haloferax gibbonsii ATCC 33959]
Length = 666
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 134/422 (31%), Positives = 201/422 (47%), Gaps = 58/422 (13%)
Query: 28 DEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQ 87
D+++ LG R+ ++A + +D+A+ +YTSGTTG PKGV LTH N
Sbjct: 176 DDVLTLGELYRRGEEVYDEAAYESWLDEREPEDLASLIYTSGTTGQPKGVQLTHWNFRSN 235
Query: 88 IRSLYDIVPA--ENGDK--------FLSMLPPWHVYERACGYFIF--SRGIELMYTAVRN 135
+ Y + GD LS LP HV+ER G+F+ + +
Sbjct: 236 VNESYRRFGPRPDKGDTPVIGPDSVALSFLPLAHVFERMAGHFMMFAAGAAVAYAESPDT 295
Query: 136 LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYE 195
L++D Q +P SVP VYE LY I+ Q S A +R+ A + + AY
Sbjct: 296 LREDFQLVRPTTGTSVPRVYEKLYDAIRAQASESPAKKRIFEWA-VGVGQAY-------- 346
Query: 196 GFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGG 254
P YL L H LA++LV+ +++ A+G + +SGG
Sbjct: 347 -----HTTDAPGYL---------------LTAKHRLADRLVFGQVREALGDNLDFFISGG 386
Query: 255 GSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAET 314
GSL + Y A+G+ + GYGLTE+SPVI+ P +G++G+P+ + E K+
Sbjct: 387 GSLSAELCALYHAMGLPIYEGYGLTETSPVISVNPPEEPKIGTIGYPLRNVETKLDTTVV 446
Query: 315 NEVL--PAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDG----WLNTGDIGWIAPHHSR 368
+ L G G + VRGS V +GY+ NP T+ A ED W TGD+ + P
Sbjct: 447 GDQLGDAGGEVGELLVRGSSVTEGYWNNPEETEAAFVEDDEGERWFRTGDVVELRPD--- 503
Query: 369 GRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAII 428
G + RAK +VLSTG+NV P +E+A S ++ Q +V+G ++ A+I
Sbjct: 504 -------GYITFRERAKQILVLSTGKNVAPGPIEDAFASSPVVEQCMVLGDGRKFVSALI 556
Query: 429 VP 430
VP
Sbjct: 557 VP 558
>gi|381159083|ref|ZP_09868316.1| AMP-forming long-chain acyl-CoA synthetase [Thiorhodovibrio sp.
970]
gi|380880441|gb|EIC22532.1| AMP-forming long-chain acyl-CoA synthetase [Thiorhodovibrio sp.
970]
Length = 606
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 129/423 (30%), Positives = 205/423 (48%), Gaps = 56/423 (13%)
Query: 51 YKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPW 110
+ G +++A+ VYTSGTTG PKGVMLTH N+L ++ ++ D FLS LP
Sbjct: 179 WHQRAAGPNELASIVYTSGTTGKPKGVMLTHGNILSNVQGALTLLDVYQEDVFLSFLPLS 238
Query: 111 HVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFT 168
H+ ER Y++ G L Y +V L +DL+ +P +I+VP V+E +Y + +QI
Sbjct: 239 HMLERTASYYLPMMAGSTLAYARSVTQLAEDLKNVRPTVIIAVPRVFERVYQRLHEQIRQ 298
Query: 169 SSAARRV---VARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAIL 225
A R +AR ++F + +R + L L
Sbjct: 299 RPAPTRWLFDLARHFGWVAFEHAQGRRRWHPLLL-------------------------L 333
Query: 226 WPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPV 284
WP + +LV K+ +G +A VSGG LP + + +G+ + GYGLTE+SPV
Sbjct: 334 WP---VLRRLVADKVLERLGGRIRAAVSGGAPLPPEVARLFLGLGLPLIQGYGLTETSPV 390
Query: 285 IAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSAT 344
++ N +VG P+ +++I +E +E+L V G VM+GY+ N +AT
Sbjct: 391 VSVNPLEDNRPETVGIPLGGVQVRI--SELDELL---------VSGPGVMRGYWNNQAAT 439
Query: 345 KQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEA 404
Q L +DGW TGD ++R G + + GR KD +VLS GE V P ++E A
Sbjct: 440 AQVLGKDGWFRTGD-----------QARLVGRHIQITGRLKDILVLSNGEKVPPADMEMA 488
Query: 405 ALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGE 464
L Q +V+G+ + A++V + + A+ + D + L+ + I +
Sbjct: 489 IALDPLFEQAMVLGEGKPFLSALLVLNADLWPSLARDFQLDPQDPASLNDQGLIKAMLAR 548
Query: 465 LRK 467
+RK
Sbjct: 549 VRK 551
>gi|289581849|ref|YP_003480315.1| AMP-dependent synthetase and ligase [Natrialba magadii ATCC 43099]
gi|289531402|gb|ADD05753.1| AMP-dependent synthetase and ligase [Natrialba magadii ATCC 43099]
Length = 669
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 139/441 (31%), Positives = 208/441 (47%), Gaps = 80/441 (18%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNL---LHQIRSLYDIVPAENGD--------KFLSML 107
DD+A+ +YTSGTTG PKGV LTH N ++QIR + P + D + +S L
Sbjct: 206 DDLASLIYTSGTTGKPKGVQLTHGNFRSNVNQIRKRFAPRPDRDDDVPVIDSESQAMSYL 265
Query: 108 PPWHVYERACGYFI-FSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQ 165
P HV+ER G+F+ F+ G + Y + L++D QP+ SVP VYE +Y I++Q
Sbjct: 266 PLAHVFERTAGHFLLFASGACVAYAENPDTLQEDFSTVQPNTATSVPRVYEKIYDAIREQ 325
Query: 166 IFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAIL 225
SS +R+ A +++ A IL
Sbjct: 326 ASESSVKKRIFEWATD-----------------------------VGVEYQRADSPGPIL 356
Query: 226 WPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPV 284
LA+KLV+ ++ A+G + +SGGGSL + Y A+G+ + GYGLTE+SPV
Sbjct: 357 NAKRALADKLVFSTVREALGGEIEILISGGGSLSPELCRLYHAMGLPIFEGYGLTETSPV 416
Query: 285 IAARRPTCNVLGSVGHPINHTEIKIVDAETNE--VLPAGSKGIVKVRGSQVMQGYFKNPS 342
IA P +G++G P+ +I I ++ N+ G+ G + VRG V QGY+ PS
Sbjct: 417 IAVNPPEEPKIGTIGPPVVDVDISIDESVVNQDAFDDPGAVGELLVRGPNVTQGYWNKPS 476
Query: 343 ATKQALDE----DG--------------------WLNTGDIGWIAPHHSRGRSRRCGGVL 378
AT +A E DG W TGD+ + R G +
Sbjct: 477 ATDRAFTEGVQPDGGAALEAPREDGDADADDDGLWFRTGDVVHL----------RDDGYI 526
Query: 379 VLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMA 438
R K IVLSTG+NV P +E+A S ++ Q +V+G ++ GA++VP+ E +
Sbjct: 527 SFRDRVKQLIVLSTGKNVAPGPIEDAFAASEIVEQAMVVGDGEKFIGALLVPNTEHIREW 586
Query: 439 AKRLSI-VHADASELSKEKTI 458
A I + DA L + +
Sbjct: 587 ADEEGIDLPGDAEALCDDDRV 607
>gi|333029389|ref|ZP_08457450.1| Long-chain-fatty-acid--CoA ligase [Bacteroides coprosuis DSM 18011]
gi|332739986|gb|EGJ70468.1| Long-chain-fatty-acid--CoA ligase [Bacteroides coprosuis DSM 18011]
Length = 601
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 142/492 (28%), Positives = 237/492 (48%), Gaps = 63/492 (12%)
Query: 5 ILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATY 64
I+++ KK + P I +++ + LG++ +++D + R ET D+A
Sbjct: 135 IIIFDKKVVLDPRDKSSI---YFEDFLSLGKDL--SYNDIVEQRTAKASET----DLANI 185
Query: 65 VYTSGTTGNPKGVMLTHKNLLHQIRSLYD--IVPAENGDKFLSMLPPWHVYERACGYFIF 122
+YTSGTTG PKGVML H N L IR ++D +V + D L+ LP HV+ER Y
Sbjct: 186 LYTSGTTGEPKGVMLHHSNYLEAIR-IHDLRLVDITDKDISLNFLPLTHVFERGWVYICV 244
Query: 123 SRGIELMYTAV-RNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALI 181
SRG+++ V ++++ ++ +P M SVP +E +Y G++ +I +S + + +
Sbjct: 245 SRGVQVCINLVPQDIQIAIKEIRPTLMCSVPRFWEKVYLGVKDKIDNTSGPMKQLMLNAV 304
Query: 182 RISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQ 241
++ + R K+P ++ L + EK V + ++
Sbjct: 305 KVGREH--------NLNYIRLGKKPPRMLHL---------------KYKFYEKTVMQLLK 341
Query: 242 SAIGISKAGV--SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVG 299
IGI + G +LP+ + F A+G+ V GYGLTES+ ++ T +GSVG
Sbjct: 342 KTIGIENGNFFPTAGAALPVEVAEFVYAVGINVITGYGLTESTATVSCTWKTHFQIGSVG 401
Query: 300 HPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDI 359
+++ ++KI D +E+L ++G + QGY+K P AT QA DGW +TGDI
Sbjct: 402 QVLDNVQVKIGDE--SEIL---------LKGKTITQGYYKKPDATAQAFTADGWFHTGDI 450
Query: 360 GWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQ 419
G++ G L + GR KD S G+ + P LE + I QI +I
Sbjct: 451 GYMK-----------DGELYMTGRLKDLFKTSNGKYIAPQALETRLVIDQFIDQIALIAD 499
Query: 420 DQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLY-GELRKWTSKCSF--QI 476
++ A+IVP +V AK I +A+ EL I +Y G + + ++ QI
Sbjct: 500 QRKFVSALIVPVYSKVEEYAKEHGIQYANLDELLTHPQILQMYKGRIDTLQQQFAYYEQI 559
Query: 477 GPIHVVDEPFTV 488
++ EPF++
Sbjct: 560 KHFTLLKEPFSM 571
>gi|398822044|ref|ZP_10580434.1| AMP-forming long-chain acyl-CoA synthetase [Bradyrhizobium sp.
YR681]
gi|398227329|gb|EJN13561.1| AMP-forming long-chain acyl-CoA synthetase [Bradyrhizobium sp.
YR681]
Length = 606
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 123/374 (32%), Positives = 201/374 (53%), Gaps = 49/374 (13%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 118
+D+A VYTSGTTG PKGVML+H N++ ++++ + A D FLS LP H +ER G
Sbjct: 186 NDLAAIVYTSGTTGRPKGVMLSHDNVVANVKAIAHRIEAAPDDVFLSFLPLSHTFERTGG 245
Query: 119 YFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 176
Y+ + G + Y +V L +DL+ +P +ISVP +YE +++ I + ++A R +
Sbjct: 246 YYYPIAAGACVAYARSVPLLSEDLKHVRPTVLISVPRIYERIHALIMQH--RATAGR--I 301
Query: 177 ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLV 236
RAL+ ++ A + + +Q +A++D L WP L ++LV
Sbjct: 302 ERALLDLTIAVGGRR---------FDARQGRGTLAVVDRL--------AWP---LLKRLV 341
Query: 237 YKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVL 295
K+ + +G + VSGG + + + A+G+ + GYG+TE+SPV++ P N
Sbjct: 342 ADKVLAQLGGRLRVAVSGGAPIAEPVIRLFIALGLDILQGYGMTETSPVVSVNTPEDNDP 401
Query: 296 GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLN 355
SVGH ++ E+++ E +E+L VRG VM GY+ P T++ + DGWL+
Sbjct: 402 RSVGHVLDGVEVRL--GENDELL---------VRGPSVMLGYWHKPEETRRVKEADGWLH 450
Query: 356 TGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIV 415
TGD ++R G + + GR KD +V STGE + P++LE A L L Q +
Sbjct: 451 TGD-----------QARIDNGRITITGRIKDILVTSTGEKIAPVDLETAILADPLFEQAL 499
Query: 416 VIGQDQRRPGAIIV 429
V+G+ + A++V
Sbjct: 500 VVGEQRPFVTALVV 513
>gi|315504530|ref|YP_004083417.1| amp-dependent synthetase and ligase [Micromonospora sp. L5]
gi|315411149|gb|ADU09266.1| AMP-dependent synthetase and ligase [Micromonospora sp. L5]
Length = 600
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 129/409 (31%), Positives = 200/409 (48%), Gaps = 53/409 (12%)
Query: 31 IDLG--RESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQI 88
IDLG + A + + A + + +DD+AT +YTSGTTG PKG +LTH+N+ I
Sbjct: 150 IDLGAVDDLVAAGASVDRAEVETRRSLLKADDVATIIYTSGTTGRPKGCVLTHRNIYSDI 209
Query: 89 RSLYDIVPA--ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQP 145
+ ++P G L LP H + R + + + A +NL +LQ ++P
Sbjct: 210 ANAVPVLPNLFRQGASTLLFLPLAHAFARLIQVGVVHARATMAHCADTKNLVAELQDFKP 269
Query: 146 HYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQ 205
+++SVP V+E +Y+G +Q S ++ RA +++ A++ + + G L
Sbjct: 270 TFVLSVPRVFEKVYNG-ARQKAESEGKGKIFDRAE-KVAIAWSEAQELPGGPGLG----- 322
Query: 206 PSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIG-ISKAGVSGGGSLPMHIDLF 264
L H L +KLVY+K+++A+G + +SGG L + F
Sbjct: 323 -------------------LRAQHALFDKLVYRKLRAAMGGRCRDAISGGAPLGARLGHF 363
Query: 265 YEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKG 324
+ +GV + GYGLTE+SP AA PT +G+VG P+ I+I D G
Sbjct: 364 FRGVGVTICEGYGLTETSPAAAANLPTGTRIGTVGRPLPGVTIRIDD-----------DG 412
Query: 325 IVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRA 384
V + G V QGY+ N +AT +A+ DGW TGD+G + G L + GR
Sbjct: 413 EVLIAGDIVFQGYWHNDAATAEAISTDGWFRTGDLGHLDDD----------GYLSITGRK 462
Query: 385 KDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 433
K+ IV + G+NV P LE+ LI Q VV+G Q A++ D+E
Sbjct: 463 KEIIVTAGGKNVAPAVLEDQVRAHPLISQCVVVGDRQPFIAALVTIDEE 511
>gi|407648283|ref|YP_006812042.1| acyl-CoA synthetase [Nocardia brasiliensis ATCC 700358]
gi|407311167|gb|AFU05068.1| acyl-CoA synthetase [Nocardia brasiliensis ATCC 700358]
Length = 597
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 137/426 (32%), Positives = 202/426 (47%), Gaps = 66/426 (15%)
Query: 16 PDIVE--EIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGN 73
PD+ E +I + DE+ G +D +D H + + + ++ AT +YTSGTTG
Sbjct: 142 PDLKETLQIDKGAVDELTSRG-------TDLDDQVVHDRRKQVNANSPATLIYTSGTTGR 194
Query: 74 PKGVMLTHKNLLHQIRS----LYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELM 129
PKGVML+H NL + RS L + + G K L LP HV+ RA F + +
Sbjct: 195 PKGVMLSHANLYAESRSDRIALAKFI--QPGKKTLMFLPLAHVFARAVALVAFDAKVIVA 252
Query: 130 YTAV-RNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYT 188
+T+ L D Y+PH+++SVP V+E +++G +++ + A A I+++
Sbjct: 253 HTSDWSTLVDQFGSYRPHFILSVPRVFEKVFNGAKQKAHDGGKGKIFDAAAETAIAYS-E 311
Query: 189 AFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS- 247
A G L H L +KLVY K++ A+G
Sbjct: 312 ALDNGGAGLVLKLK--------------------------HALFDKLVYSKLRVALGGQC 345
Query: 248 KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEI 307
A VSGGG L + F+ +GV + GYGLTE++ + P +G+VG PI
Sbjct: 346 DAAVSGGGPLGARLGHFFRGVGVTIYEGYGLTETTAAVTVNTPEKIRVGTVGRPIEGHSA 405
Query: 308 KIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHS 367
KI AE E+L +RGS V GY+ N AT+ A DGW TGD+G I
Sbjct: 406 KI--AEDGELL---------LRGSVVFDGYWGNAEATEDAF-ADGWFKTGDLGAI----- 448
Query: 368 RGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAI 427
G + + GR K+ IV + G+NV P LE++ LI Q++V+G Q GA+
Sbjct: 449 -----DADGFITITGRKKELIVTAGGKNVSPALLEDSLRAHPLISQVMVVGDGQPFIGAL 503
Query: 428 IVPDKE 433
I D E
Sbjct: 504 ITLDPE 509
>gi|289581785|ref|YP_003480251.1| AMP-dependent synthetase and ligase [Natrialba magadii ATCC 43099]
gi|448282809|ref|ZP_21474091.1| AMP-dependent synthetase and ligase [Natrialba magadii ATCC 43099]
gi|289531338|gb|ADD05689.1| AMP-dependent synthetase and ligase [Natrialba magadii ATCC 43099]
gi|445575424|gb|ELY29899.1| AMP-dependent synthetase and ligase [Natrialba magadii ATCC 43099]
Length = 672
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 133/412 (32%), Positives = 194/412 (47%), Gaps = 70/412 (16%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLY----------DIVPAENGDKFL-SML 107
DD+A+ +YTSGTTG PKGVMLTH N + +Y D VP + D L S L
Sbjct: 208 DDLASIIYTSGTTGKPKGVMLTHGNFRTNVNQVYRRYGPRPDKDDDVPTIDQDSTLVSYL 267
Query: 108 PPWHVYERACGYFI-FSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQ 165
P HV+ER G+F+ F+ G + Y + LK+D Q QP SVP VYE +Y I++Q
Sbjct: 268 PLAHVFERTAGHFLLFAAGATVAYAESSDTLKEDFQAVQPTGATSVPRVYEKIYDTIREQ 327
Query: 166 IFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAIL 225
S R+ ++A + Y + P L
Sbjct: 328 ATESPVKERI-------FNWATDVSREYYRA-----DDPGPVLEFKLS------------ 363
Query: 226 WPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPV 284
+A+KLV+ K++ A+G + + VSGGGSL + Y +G+ + GYGLTE+SPV
Sbjct: 364 -----VADKLVFSKVKEALGGNIEMLVSGGGSLSPELCQLYHGMGLPIFEGYGLTETSPV 418
Query: 285 IAARRPTCNVLGSVGHPINHTEIKIVDA---ETNEVLPAGSKGIVKVRGSQVMQGYFKNP 341
+ P +G+VG I ++ + D+ + + G G + VRG V QGY+ P
Sbjct: 419 VTTNPPEEPKIGTVGPAIVDCDVTVDDSIVPDGDAASTPGETGELLVRGPNVTQGYWNKP 478
Query: 342 SATKQALDEDG--------------WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDT 387
AT +A E W TGDI I P G + R K
Sbjct: 479 EATDRAFTEHAPGVDEDDDGEDKGKWFRTGDIVTIRPD----------GYIEFHERTKQL 528
Query: 388 IVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAA 439
+VLSTG+NV P +E+A L+ Q +V+G ++ GA++VP+ + + AA
Sbjct: 529 VVLSTGKNVAPAPIEDAFASKELVEQCMVVGDSEKFVGALLVPNIDAIERAA 580
>gi|300114859|ref|YP_003761434.1| AMP-dependent synthetase and ligase [Nitrosococcus watsonii C-113]
gi|299540796|gb|ADJ29113.1| AMP-dependent synthetase and ligase [Nitrosococcus watsonii C-113]
Length = 601
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 138/416 (33%), Positives = 209/416 (50%), Gaps = 50/416 (12%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 118
D +AT VYTSGTTG PKGVML+H N+L S P D FLS LP H ER G
Sbjct: 183 DALATIVYTSGTTGLPKGVMLSHHNILWNAHSSLHSTPVYEDDVFLSFLPLSHTLERTIG 242
Query: 119 YFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 176
Y++ G ++ YT ++ L +DL +P ++SVP ++E ++ QI+ + + +
Sbjct: 243 YYLPMMAGAQVAYTRSIAKLAEDLATVKPTVLVSVPRIFERTHN----QIYDTLQEKNPL 298
Query: 177 ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLV 236
RAL R++ A G+ +Q +Y W +C L+ L +++V
Sbjct: 299 ERALFRLAVA--------AGW------RQFNYQQGHAPW---HPLCL----LNPLLQQIV 337
Query: 237 YKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVL 295
+++ + G + V GG L ++ A+G+ + GYGLTE+SPVI+ N
Sbjct: 338 GRQVLAQFGGRLRIVVCGGAPLAFNVAKELLALGLPLIQGYGLTETSPVISVNHLNNNDP 397
Query: 296 GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLN 355
SVG P+ EI+I E NE+L S G VM GY+ NP AT + +DE GWL+
Sbjct: 398 KSVGTPLQDVEIRI--GEHNELL-GHSPG--------VMLGYWNNPKATAEVIDEKGWLH 446
Query: 356 TGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIV 415
TGD ++R G L + GR K+ IVL+TGE + P E+E A SL Q++
Sbjct: 447 TGD-----------QARIEQGRLYITGRIKEIIVLATGEKIPPGEMETAISTDSLFDQVM 495
Query: 416 VIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSK 471
VIG+ + A+IV + E A+ L++ A L + + G + + T +
Sbjct: 496 VIGEGKPYLSALIVLNPEHWTTLAQELNLDPHQAQSLKHSTVLEEVLGRIEQHTRQ 551
>gi|448620307|ref|ZP_21667655.1| acyl-CoA synthetase [Haloferax denitrificans ATCC 35960]
gi|445757095|gb|EMA08451.1| acyl-CoA synthetase [Haloferax denitrificans ATCC 35960]
Length = 668
Score = 182 bits (461), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 134/422 (31%), Positives = 204/422 (48%), Gaps = 58/422 (13%)
Query: 28 DEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQ 87
++++ LG R+ ++A + +D+A+ +YTSGTTG PKGV LTH N
Sbjct: 176 EDVLTLGELYRRGEDVYDEAAYESWLDERDPEDLASLIYTSGTTGRPKGVRLTHWNFRSN 235
Query: 88 IRSLYDIVPA--ENGDK--------FLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRN 135
+ Y + GD LS LP HV+ER G+F+ F+ G + Y +
Sbjct: 236 VNESYRRFGPRPDKGDTPVIGPDAVTLSFLPLAHVFERMAGHFMMFAAGATVAYAESPDT 295
Query: 136 LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYE 195
L++D Q +P SVP VYE LY I+ Q S A +RV A + + AY
Sbjct: 296 LREDFQLARPTVGTSVPRVYEKLYDAIRTQASESPAKKRVFEWA-VGVGQAY-------- 346
Query: 196 GFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGG 254
P YL++ H LA++LV+ +++ A+G + +SGG
Sbjct: 347 -----HTTDAPGYLLSA---------------KHRLADRLVFGQVREALGDNIDFFISGG 386
Query: 255 GSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAET 314
GSL + Y A+G+ + GYGLTE+SPVI+ P +G++G+P+ E ++
Sbjct: 387 GSLSAELCALYHAMGLPIYEGYGLTETSPVISVNPPEEPKIGTIGYPLRTVETELDATVV 446
Query: 315 NEVL--PAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDG----WLNTGDIGWIAPHHSR 368
+ L G G + VRG V +GY+ +P T+ A ED W TGD+
Sbjct: 447 GDRLGDAGGEVGELLVRGPSVTEGYWNDPEETEAAFVEDDEGERWFRTGDV--------- 497
Query: 369 GRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAII 428
RR G + RAK +VLSTG+NV P +E+A S ++ Q +V+G ++ A+I
Sbjct: 498 -VERRPDGYIAFRERAKQILVLSTGKNVAPGPIEDAFASSPVVEQCMVLGDGRKFVSALI 556
Query: 429 VP 430
VP
Sbjct: 557 VP 558
>gi|448356483|ref|ZP_21545216.1| AMP-dependent synthetase and ligase [Natrialba chahannaoensis JCM
10990]
gi|445653516|gb|ELZ06387.1| AMP-dependent synthetase and ligase [Natrialba chahannaoensis JCM
10990]
Length = 674
Score = 182 bits (461), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 134/414 (32%), Positives = 195/414 (47%), Gaps = 72/414 (17%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLY----------DIVPAENGDKFL-SML 107
DD+A+ +YTSGTTG PKGVMLTH N + +Y D VP + D L S L
Sbjct: 208 DDLASIIYTSGTTGKPKGVMLTHGNFRTNVNQVYRRYGPRPDKDDDVPCIDQDSTLVSYL 267
Query: 108 PPWHVYERACGYFI-FSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQ 165
P HV+ER G+F+ F+ G + Y + LK+D Q QP SVP VYE +Y I++Q
Sbjct: 268 PLAHVFERTAGHFLLFAAGATVAYAESSDTLKEDFQAVQPTGATSVPRVYEKIYDTIREQ 327
Query: 166 IFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAIL 225
S R+ ++A + Y+ A AIL
Sbjct: 328 ATESPVKERI-------FNWATNVSREYYQ----------------------ADDPGAIL 358
Query: 226 WPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPV 284
+A+KLV+ K++ A+G + + VSGGGSL + Y +G+ + GYGLTE+SPV
Sbjct: 359 EFKLSVADKLVFSKVKEALGGNIEMLVSGGGSLSPELCQLYHGMGLPIFEGYGLTETSPV 418
Query: 285 IAARRPTCNVLGSVGHPINHTEIKIVDA---ETNEVLPAGSKGIVKVRGSQVMQGYFKNP 341
+ P +G+VG I ++ + D+ + + G G + VRG V QGY+ P
Sbjct: 419 VTTNPPEEPKIGTVGPAIVDCDVTVDDSIVPDGDATSTPGETGELLVRGPNVTQGYWNKP 478
Query: 342 SATKQALDEDG----------------WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAK 385
AT +A E W TGDI I P + R K
Sbjct: 479 EATDRAFTEHAPGVDEDEDGDSEDKGKWFRTGDIVTIRPDD----------YIEFHERTK 528
Query: 386 DTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAA 439
+VLSTG+NV P +E+A L+ Q +V+G ++ GA++VP+ + + AA
Sbjct: 529 QLVVLSTGKNVAPAPIEDAFASKGLVEQCMVVGDGEKFVGALLVPNIDAIERAA 582
>gi|300710198|ref|YP_003736012.1| AMP-dependent synthetase and ligase [Halalkalicoccus jeotgali B3]
gi|448297030|ref|ZP_21487078.1| AMP-dependent synthetase and ligase [Halalkalicoccus jeotgali B3]
gi|299123881|gb|ADJ14220.1| AMP-dependent synthetase and ligase [Halalkalicoccus jeotgali B3]
gi|445580212|gb|ELY34598.1| AMP-dependent synthetase and ligase [Halalkalicoccus jeotgali B3]
Length = 647
Score = 182 bits (461), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 140/430 (32%), Positives = 211/430 (49%), Gaps = 68/430 (15%)
Query: 24 VFSYDEIIDLGRES--RKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTH 81
V + E+ D G + R+A+ D DA + +D+AT +YTSGTTG PKGV LTH
Sbjct: 177 VLTLAELHDRGEAAFDREAYEDWVDA--------VAPEDLATLIYTSGTTGQPKGVELTH 228
Query: 82 KNL---LHQIRSLYDI--------VPAENGD-KFLSMLPPWHVYERACGYFI-FSRGIEL 128
+NL + Q R + +PA +G+ + +S LP HV ER G+F+ F+ G +
Sbjct: 229 RNLRANVTQCRKRFGPRPDKEAKGLPAIDGETRTVSFLPLAHVLERTAGHFLMFASGAAV 288
Query: 129 MYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAY 187
Y + L++D Q +P SVP VYE +Y I+ Q S RR+ A + + AY
Sbjct: 289 AYAESPDTLQEDFQAVRPTTGTSVPRVYEKIYDAIRSQASESDLRRRIFEWA-VDVGKAY 347
Query: 188 TAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS 247
+ PS +L +A+KLV+ +++ A+G
Sbjct: 348 ---------------HRDPS-------------PGPVLTGKQAIADKLVFSQVKEALGGE 379
Query: 248 -KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTE 306
+ +SGGGSL + Y +G+ + GYGLTE+SPVI+ +G++G P+ E
Sbjct: 380 IEFLISGGGSLSAELCALYHGMGMPILEGYGLTETSPVISVNPIEAPEIGTIGPPLPDVE 439
Query: 307 IKI---VDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIA 363
++ V E G G + VRG V +GY++N AT ++ ED W TGD+ I
Sbjct: 440 ARVDASVVGEAQRRDADGEVGELLVRGPNVTRGYWRNEEATAESFTED-WFRTGDVVEIR 498
Query: 364 PHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRR 423
P +V RAK IVLSTG+NV P +E+A S L+ Q V+G ++
Sbjct: 499 PDD----------YVVFRERAKQIIVLSTGKNVAPGPIEDAFAASELVEQCFVMGDGRKF 548
Query: 424 PGAIIVPDKE 433
A++VP+ E
Sbjct: 549 ISALVVPNVE 558
>gi|383620428|ref|ZP_09946834.1| AMP-dependent synthetase and ligase [Halobiforma lacisalsi AJ5]
gi|448697789|ref|ZP_21698667.1| AMP-dependent synthetase and ligase [Halobiforma lacisalsi AJ5]
gi|445781155|gb|EMA32016.1| AMP-dependent synthetase and ligase [Halobiforma lacisalsi AJ5]
Length = 647
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 125/410 (30%), Positives = 197/410 (48%), Gaps = 55/410 (13%)
Query: 58 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLY-----------DIVPAENGDKFLSM 106
+DD+A+ +YTSGTTG PKGV LTH N + L D+ + + +S
Sbjct: 205 TDDLASLIYTSGTTGQPKGVKLTHWNFRANVNQLRKRMAPRPDRPDDLPSIDESAQTVSY 264
Query: 107 LPPWHVYERACGYF-IFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQK 164
LP HV+ER G+F IF+ G + Y + L++D P+ SVP VYE +Y I++
Sbjct: 265 LPLAHVFERTAGHFLIFASGGCVAYAEDPDTLQEDFSAVGPNVATSVPRVYEKIYDAIRE 324
Query: 165 QIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAI 224
Q S +R+ A +D+ +
Sbjct: 325 QASESPVKKRIFEWATD-----------------------------VGVDYQETDDPGPV 355
Query: 225 LWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSP 283
L LA++LV+ ++ A+G + +SGGGSL + Y A+G+ + GYGLTE++P
Sbjct: 356 LSAKQALADRLVFSTVREALGGEIEMLISGGGSLSPELCTLYHAMGLPIYEGYGLTETAP 415
Query: 284 VIAARRPTCNVLGSVGHPINHTEIKIVDAETNE--VLPAGSKGIVKVRGSQVMQGYFKNP 341
V+A P +G++G + E+++ ++ N+ G G + V G V GY++ P
Sbjct: 416 VLAVNPPEEPKIGTIGPALPDVELRVDESVANQDAFDDPGEVGELVVTGPNVTDGYWEKP 475
Query: 342 SATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLEL 401
SAT +A EDGW TGDI + P G + R K +VLSTG+NV P +
Sbjct: 476 SATDRAFTEDGWFRTGDIVHLRPD----------GYIEFRDRVKQILVLSTGKNVAPGPI 525
Query: 402 EEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASE 451
E+A S ++ Q +V+G +++ GA++VP+ + + A I D E
Sbjct: 526 EDAFAASEVVEQAMVVGDNEKFVGALLVPNTDHIREWADEEGIDLPDDPE 575
>gi|336253150|ref|YP_004596257.1| Long-chain-fatty-acid--CoA ligase [Halopiger xanaduensis SH-6]
gi|335337139|gb|AEH36378.1| Long-chain-fatty-acid--CoA ligase [Halopiger xanaduensis SH-6]
Length = 666
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 134/426 (31%), Positives = 203/426 (47%), Gaps = 72/426 (16%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLY----------DIVPA-ENGDKFLSML 107
DD+A+ +YTSGTTG PKGV LTH+N + ++ D VP + + +S L
Sbjct: 208 DDLASLIYTSGTTGKPKGVRLTHRNFRSNVNQVHRRFAPRPDRDDDVPTLDETSRAVSYL 267
Query: 108 PPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQ 165
P HV+ER G+F+ F+ G + Y + L++D +P SVP VYE +Y I++Q
Sbjct: 268 PLAHVFERTAGHFVLFATGASVAYAESPDTLQEDFSLVEPTTATSVPRVYEKIYDRIREQ 327
Query: 166 IFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAIL 225
S A +R+ A + AY + +P L L
Sbjct: 328 ASESPAKKRIFEWA-TDVGVAY-------------QETDEPGPL---------------L 358
Query: 226 WPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPV 284
LA+KLV+ ++ A+G + + +SGGGSL + Y A+G+ + GYGLTE+SPV
Sbjct: 359 RAKRTLADKLVFSTVREALGGNIELLISGGGSLSPELCQLYHAMGLPIHEGYGLTETSPV 418
Query: 285 IAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA---GSKGIVKVRGSQVMQGYFKNP 341
I+ P +G++G P+ EI I ++ ++ A G G + VRG V +GY+ P
Sbjct: 419 ISVNPPGEVKIGTIGPPVVDVEIAIDESVADQAAFADDPGEVGELLVRGPNVTRGYWNKP 478
Query: 342 SATKQALDED----------------GWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAK 385
AT ++ +D W TGD+ RR L RAK
Sbjct: 479 GATDRSFTDDIGESEATVMADGEASGQWFRTGDV----------VHRRPDDYLEFRDRAK 528
Query: 386 DTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIV 445
+VLSTG+NV P +E+ + S ++ Q +V+G ++ GA+IVP+ V A R I
Sbjct: 529 QILVLSTGKNVAPAPIEDRFVSSEVVEQCMVVGDGEKFVGALIVPNTAHVREWADREGID 588
Query: 446 HADASE 451
D E
Sbjct: 589 LPDDPE 594
>gi|448544962|ref|ZP_21625775.1| acyl-CoA synthetase [Haloferax sp. ATCC BAA-646]
gi|448547339|ref|ZP_21626817.1| acyl-CoA synthetase [Haloferax sp. ATCC BAA-645]
gi|448556217|ref|ZP_21631942.1| acyl-CoA synthetase [Haloferax sp. ATCC BAA-644]
gi|445704740|gb|ELZ56649.1| acyl-CoA synthetase [Haloferax sp. ATCC BAA-646]
gi|445716350|gb|ELZ68094.1| acyl-CoA synthetase [Haloferax sp. ATCC BAA-645]
gi|445716969|gb|ELZ68698.1| acyl-CoA synthetase [Haloferax sp. ATCC BAA-644]
Length = 666
Score = 181 bits (460), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 134/422 (31%), Positives = 202/422 (47%), Gaps = 58/422 (13%)
Query: 28 DEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQ 87
++++ LG R+ ++A + +DD+A+ +YTSGTTG PKGV LTH N
Sbjct: 176 EDVLTLGELYRRGEEAYDEAAYESWLDERDTDDLASLIYTSGTTGQPKGVRLTHWNFRSN 235
Query: 88 IRSLYDIVPA--ENGDK--------FLSMLPPWHVYERACGYFIF--SRGIELMYTAVRN 135
+ Y + GD LS LP HV+ER G+F+ + +
Sbjct: 236 VNESYRRFGPRPDKGDTPVIGPDSVALSFLPLAHVFERMAGHFMMFAAGAAVAYAESPDT 295
Query: 136 LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYE 195
L++D Q +P SVP VYE LY I+ + S A +RV A + + AY
Sbjct: 296 LREDFQLVRPTVGTSVPRVYEKLYDAIRAEAGESPAKKRVFEWA-VGVGQAY-------- 346
Query: 196 GFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGG 254
P YL L H LA++LV+ +++ A+G + +SGG
Sbjct: 347 -----HTTDAPGYL---------------LTAKHRLADRLVFGQVRDALGGNLDFFISGG 386
Query: 255 GSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAET 314
GSL + Y A+G+ + GYGLTE+SPVI+ P +G++G+P+ + E K+
Sbjct: 387 GSLSAELCALYHAMGLPIYEGYGLTETSPVISVNPPEAPKIGTIGYPLRNVETKLDTTVV 446
Query: 315 NEVL--PAGSKGIVKVRGSQVMQGYFKNPSATKQAL---DEDG-WLNTGDIGWIAPHHSR 368
+ L G G + VRG V +GY+ +P T+ A DE G W TGD+
Sbjct: 447 GDQLGEAGGEVGELLVRGPSVTEGYWNDPEETEAAFVGDDEGGRWFRTGDV--------- 497
Query: 369 GRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAII 428
RR G + RAK +VLSTG+NV P +E+A S ++ Q +V+G ++ A+I
Sbjct: 498 -VERRPDGYIAFRERAKQILVLSTGKNVAPGPIEDAFASSPVVEQCMVLGDGRKFVSALI 556
Query: 429 VP 430
VP
Sbjct: 557 VP 558
>gi|114321276|ref|YP_742959.1| AMP-dependent synthetase and ligase [Alkalilimnicola ehrlichii
MLHE-1]
gi|114227670|gb|ABI57469.1| AMP-dependent synthetase and ligase [Alkalilimnicola ehrlichii
MLHE-1]
Length = 620
Score = 181 bits (460), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 120/372 (32%), Positives = 189/372 (50%), Gaps = 49/372 (13%)
Query: 61 IATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF 120
+A+ VYTSG+TG PKGVML+H+N+L + + D FLS LP H ER GY+
Sbjct: 190 LASIVYTSGSTGRPKGVMLSHRNMLENAYAGLQRIAIYPDDLFLSFLPLSHTLERTIGYY 249
Query: 121 I-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 178
+ G + Y +V +L +DL ++P ++SVP +YE +Y IQ+ + S R +
Sbjct: 250 LPIMTGSTVAYARSVPDLPEDLATHRPTALVSVPRIYERVYGRIQEGLKAKSGLARALFH 309
Query: 179 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 238
+ +R+ + ++R +G C ++ + WP L +LV
Sbjct: 310 SAVRV--GWHRYQR-GQGLCGWHPRE-------------------LAWP---LLHRLVAG 344
Query: 239 KIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 297
K+ + +G + +SGG L + + ++GV V GYGLTESSPVI+ N G+
Sbjct: 345 KVTARLGGRVRVAISGGAPLSREVAQLFLSLGVPVLEGYGLTESSPVISVNTLEDNRPGT 404
Query: 298 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 357
VG P+ E++I G +G + RG +M GY+ NP AT ALD DGWL+TG
Sbjct: 405 VGKPLPGVEVRI-----------GEQGELLARGPNIMLGYWNNPEATAAALDRDGWLHTG 453
Query: 358 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 417
D + G + + GR K+ IV++ GE V P ++E A + Q++V+
Sbjct: 454 DQARLDDE----------GRITITGRLKEIIVMANGEKVPPADMELAIANDPVFEQVMVV 503
Query: 418 GQDQRRPGAIIV 429
G+ + GA++V
Sbjct: 504 GEGRPYLGALVV 515
>gi|83815604|ref|YP_445334.1| acyl-CoA synthetase, long-chain-fatty acid:CoA ligase [Salinibacter
ruber DSM 13855]
gi|83756998|gb|ABC45111.1| putative acyl-CoA synthetase, long-chain-fatty acid:CoA ligase
[Salinibacter ruber DSM 13855]
Length = 632
Score = 181 bits (460), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 140/457 (30%), Positives = 215/457 (47%), Gaps = 67/457 (14%)
Query: 16 PDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPK 75
PD+ + + + + + + LGR D + A + E I D+AT +YTSGTTG PK
Sbjct: 160 PDLPDRVTLKTLEAVQALGRAE---VEDPSAAVDDLRAE-IDPQDLATIIYTSGTTGRPK 215
Query: 76 GVMLTHKNL----LHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYT 131
GVML+H+N+ + I + D G+ +S LP HV+ R Y RGI + +
Sbjct: 216 GVMLSHENISSNAITSIAEIDDFETGPEGEVVISFLPLTHVFARMLQYAYMMRGISIYFA 275
Query: 132 AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFK 191
+L D L + +P SVP V E +Y+GI+K++ ++ + ++++ Y
Sbjct: 276 HPDDLVDALPKVRPTVFASVPRVLEKVYAGIKKKVMGMQGLQKRIGEWGLQVAQDYD--- 332
Query: 192 RIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLL----AEKLVYKKIQSAIGIS 247
+TR+Q PL+ L A++LV++K ++A G
Sbjct: 333 -------MTRSQP----------------------PLYALKRAAADRLVFRKWRAAFGGR 363
Query: 248 -KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTE 306
K V GG +L + A + GYGLTE+SPVI+ RP N G+VG P+ E
Sbjct: 364 VKYVVVGGAALQPDLANILAAADITTLQGYGLTETSPVISYTRPQRNKPGTVGEPLPGVE 423
Query: 307 IKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHH 366
+KI AE E+L RG VMQGY+K P T ++E+GWL+TGDIG
Sbjct: 424 VKI--AEDGEIL---------TRGPHVMQGYYKAPDETDAVMEENGWLHTGDIGEFDED- 471
Query: 367 SRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGA 426
G L + R K LSTG+ V P +E L+ VV+G+D++ A
Sbjct: 472 ---------GFLKITDRKKALFKLSTGKYVMPQPIENRMGSDPLVDNAVVVGRDRKFCAA 522
Query: 427 IIVPDKEEV-LMAAKRLSIVHADASELSKEKTISLLY 462
++ P ++ +A++R D +L E I Y
Sbjct: 523 LLFPAPDQAQALASERGLGAERDIEDLLTEPDIVNAY 559
>gi|294507212|ref|YP_003571270.1| long-chain-fatty-acid--CoA ligase [Salinibacter ruber M8]
gi|294343540|emb|CBH24318.1| Long-chain-fatty-acid--CoA ligase [Salinibacter ruber M8]
Length = 632
Score = 181 bits (460), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 140/457 (30%), Positives = 215/457 (47%), Gaps = 67/457 (14%)
Query: 16 PDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPK 75
PD+ + + + + + + LGR D + A + E I D+AT +YTSGTTG PK
Sbjct: 160 PDLPDRVTLKTLEAVQALGRAE---VEDPSAAVDDLRAE-IDPQDLATIIYTSGTTGRPK 215
Query: 76 GVMLTHKNL----LHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYT 131
GVML+H+N+ + I + D G+ +S LP HV+ R Y RGI + +
Sbjct: 216 GVMLSHENISSNAITSIAEIDDFETGPEGEVVISFLPLTHVFARMLQYAYMMRGISIYFA 275
Query: 132 AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFK 191
+L D L + +P SVP V E +Y+GI+K++ ++ + ++++ Y
Sbjct: 276 HPDDLVDALPKVRPTVFASVPRVLEKVYAGIKKKVMGMQGLQKRIGEWGLQVAQDYD--- 332
Query: 192 RIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLL----AEKLVYKKIQSAIGIS 247
+TR+Q PL+ L A++LV++K ++A G
Sbjct: 333 -------MTRSQP----------------------PLYALKRAAADRLVFRKWRAAFGGR 363
Query: 248 -KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTE 306
K V GG +L + A + GYGLTE+SPVI+ RP N G+VG P+ E
Sbjct: 364 VKYVVVGGAALQPDLANILAAADITTLQGYGLTETSPVISYTRPQRNKPGTVGEPLPGVE 423
Query: 307 IKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHH 366
+KI AE E+L RG VMQGY+K P T ++E+GWL+TGDIG
Sbjct: 424 VKI--AEDGEIL---------TRGPHVMQGYYKAPDETDAVMEENGWLHTGDIGEFDED- 471
Query: 367 SRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGA 426
G L + R K LSTG+ V P +E L+ VV+G+D++ A
Sbjct: 472 ---------GFLKITDRKKALFKLSTGKYVMPQPIENRMGSDPLVDNAVVVGRDRKFCAA 522
Query: 427 IIVPDKEEV-LMAAKRLSIVHADASELSKEKTISLLY 462
++ P ++ +A++R D +L E I Y
Sbjct: 523 LLFPAPDQAQALASERGLGAERDIEDLLTEPDIVDAY 559
>gi|417321242|ref|ZP_12107782.1| putative long-chain-fatty-acid-CoA ligase [Vibrio parahaemolyticus
10329]
gi|328471922|gb|EGF42799.1| putative long-chain-fatty-acid-CoA ligase [Vibrio parahaemolyticus
10329]
Length = 602
Score = 181 bits (460), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 134/445 (30%), Positives = 210/445 (47%), Gaps = 55/445 (12%)
Query: 44 SNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKF 103
S+ A + E DD+ T +YTSGTTG PKGVML + N+ Q+ + GD
Sbjct: 163 SHQAELDERLEQAKVDDLLTLIYTSGTTGQPKGVMLDYGNIAAQLEGHDQRLSLSQGDVS 222
Query: 104 LSMLPPWHVYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLYSGI 162
L LP HV+ERA +++ +G Y ++D L +P M +VP YE ++S I
Sbjct: 223 LCFLPLSHVFERAWTFYVLYKGATNCYLQDTMQVRDALSEVRPTVMCAVPRFYEKIFSAI 282
Query: 163 QKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIIC 222
+++ + R+++ F + C + +++PS +
Sbjct: 283 HEKVSRAPIHRKIM--------FTWAVNMGAKMALC-HQEKRKPSMM------------- 320
Query: 223 AILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTES 281
L H LA+KLV K+++ +G + GG L I F+ AIG+ V++GYG+TE+
Sbjct: 321 --LRKAHALADKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTET 378
Query: 282 SPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNP 341
+ I+ C S+G + ++KI E NE+L VRG VM+GY+K P
Sbjct: 379 TATISCWDDKCFDPDSIGMSMPGAQVKI--GENNEIL---------VRGPMVMRGYYKMP 427
Query: 342 SATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLEL 401
T++ DE G+L TGD G I + G L + R K+ + S G+ + P +
Sbjct: 428 EETEKTFDEHGFLKTGDAGHIDEN----------GNLFITDRIKELMKTSGGKYIAPQMI 477
Query: 402 EEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK------- 454
E A + I QI VI ++ A+IVP + + AK L+I + D EL K
Sbjct: 478 EGAIGKDHFIEQIAVIADTRKFVSALIVPCFDSLEEYAKELNIAYHDRVELIKHHQVVEM 537
Query: 455 -EKTISLLYGELRKWTSKCSFQIGP 478
EK ++ L EL K+ F++ P
Sbjct: 538 LEKRVNELQKELAKFEQVKKFKLLP 562
>gi|345865361|ref|ZP_08817547.1| long-chain-fatty-acid--CoA ligase [endosymbiont of Tevnia
jerichonana (vent Tica)]
gi|345123530|gb|EGW53424.1| long-chain-fatty-acid--CoA ligase [endosymbiont of Tevnia
jerichonana (vent Tica)]
Length = 593
Score = 181 bits (460), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 136/443 (30%), Positives = 215/443 (48%), Gaps = 58/443 (13%)
Query: 51 YKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPW 110
Y+ + ++ +AT VYTSGTTG PKGVML+H+N+L I + ++ + D FLS LP
Sbjct: 172 YQAVDLDTNALATIVYTSGTTGRPKGVMLSHRNILWDIEAGLKLIDVFSNDLFLSFLPLS 231
Query: 111 HVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFT 168
H ER GY++ G + Y ++ L +DLQ+ +P +I+VP ++E +Y+ + +
Sbjct: 232 HALERTVGYYLPIVAGSRVAYARSIPELAEDLQQLRPTVLIAVPRIFERIYNKLMSALDE 291
Query: 169 SSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPL 228
+R + + ++ + +++ R P L WP
Sbjct: 292 GPTLKRKLFESAVQTGWQNFNYQQ-------GRAHWSPRLLG---------------WP- 328
Query: 229 HLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAA 287
L E+LV KK+Q +G + VSGG L I + +GV + GYGLTE+SP+IA
Sbjct: 329 --LLERLVAKKLQQRLGGRLRIAVSGGAPLTAEIARTFVGLGVPILQGYGLTETSPIIAE 386
Query: 288 RRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQA 347
N+ SVG + E +I G ++VR VM GY+ NP AT +
Sbjct: 387 NTHADNIPDSVGLILPGIEARI-----------GENDELQVRSPTVMLGYWNNPQATAET 435
Query: 348 LDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALR 407
+D DGWL+TGD I +H L + GR K+ IVL+ GE V P ++E
Sbjct: 436 IDPDGWLHTGDKVKIEQNH-----------LFITGRIKEIIVLANGEKVPPADMEMCIAL 484
Query: 408 SSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE--KTISLLYGEL 465
L Q++VIG+ + A++V + ++ + + D + L+K + IS G
Sbjct: 485 DPLFEQVLVIGEGRPYLSAMVVLNPKQCEHEGIDIENLSVDGA-LNKRLLERISSHLGSF 543
Query: 466 RKWTSKCSFQIGPIHVVDEPFTV 488
+ QI + V+DEP+TV
Sbjct: 544 PGYA-----QIRRLAVIDEPWTV 561
>gi|345877498|ref|ZP_08829243.1| DNA polymerase III subunit delta' [endosymbiont of Riftia
pachyptila (vent Ph05)]
gi|344225466|gb|EGV51824.1| DNA polymerase III subunit delta' [endosymbiont of Riftia
pachyptila (vent Ph05)]
Length = 619
Score = 181 bits (459), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 136/443 (30%), Positives = 215/443 (48%), Gaps = 58/443 (13%)
Query: 51 YKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPW 110
Y+ + ++ +AT VYTSGTTG PKGVML+H+N+L I + ++ + D FLS LP
Sbjct: 198 YQAVDLDTNALATIVYTSGTTGRPKGVMLSHRNILWDIEAGLKLIDVFSNDLFLSFLPLS 257
Query: 111 HVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFT 168
H ER GY++ G + Y ++ L +DLQ+ +P +I+VP ++E +Y+ + +
Sbjct: 258 HALERTVGYYLPIVAGSRVAYARSIPELAEDLQQLRPTVLIAVPRIFERIYNKLMSALDE 317
Query: 169 SSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPL 228
+R + + ++ + +++ R P L WP
Sbjct: 318 GPTLKRKLFESAVQTGWQNFNYQQ-------GRAHWSPRLLG---------------WP- 354
Query: 229 HLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAA 287
L E+LV KK+Q +G + VSGG L I + +GV + GYGLTE+SP+IA
Sbjct: 355 --LLERLVAKKLQQRLGGRLRIAVSGGAPLTAEIARTFVGLGVPILQGYGLTETSPIIAE 412
Query: 288 RRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQA 347
N+ SVG + E +I G ++VR VM GY+ NP AT +
Sbjct: 413 NTHADNIPDSVGLILPGIEARI-----------GENDELQVRSPTVMLGYWNNPQATAET 461
Query: 348 LDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALR 407
+D DGWL+TGD I +H L + GR K+ IVL+ GE V P ++E
Sbjct: 462 IDPDGWLHTGDKVKIEQNH-----------LFITGRIKEIIVLANGEKVPPADMEMCIAL 510
Query: 408 SSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE--KTISLLYGEL 465
L Q++VIG+ + A++V + ++ + + D + L+K + IS G
Sbjct: 511 DPLFEQVLVIGEGRPYLSAMVVLNPKQCEHEGIDIENLSVDGA-LNKRLLERISSHLGSF 569
Query: 466 RKWTSKCSFQIGPIHVVDEPFTV 488
+ QI + V+DEP+TV
Sbjct: 570 PGYA-----QIRRLAVIDEPWTV 587
>gi|373958206|ref|ZP_09618166.1| AMP-dependent synthetase and ligase [Mucilaginibacter paludis DSM
18603]
gi|373894806|gb|EHQ30703.1| AMP-dependent synthetase and ligase [Mucilaginibacter paludis DSM
18603]
Length = 637
Score = 181 bits (459), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 129/425 (30%), Positives = 210/425 (49%), Gaps = 54/425 (12%)
Query: 24 VFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKN 83
+ ++ +I+ GR+ +S + +A + E I D++ +YTSGTTG PKGVMLTH N
Sbjct: 159 LIAFANLIEEGRKCVSQYSQAINAAR----EAIIPSDLSCLIYTSGTTGTPKGVMLTHSN 214
Query: 84 LLHQIRSLYDIVPAENGDK-FLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDL 140
L+ +R D +P + D+ FLS LP HV+ER Y + ++G ++ + ++ L ++
Sbjct: 215 LVENVRVCLDQIPVIDKDETFLSFLPLSHVFERTATYHVCLAKGCKIAFAQSLDLLAKNM 274
Query: 141 QRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLT 200
+P M VP + E ++ K ++ + + + I Y +
Sbjct: 275 GEVKPTVMNCVPRLLERIHDKAMKNGTSAGGTKTKIFLWALEIGKKYR---------LVQ 325
Query: 201 RNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPM 259
K+P + IL H +A+KLV+ KI+ G K +SGGG+LP
Sbjct: 326 EAGKKPGF---------------ILQQQHKIADKLVFSKIKEKTGGRLKFMISGGGALPK 370
Query: 260 HIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVL- 318
+I F+ +G+K+ G+GLTE+SPV++ V G+VG I E+ I + +T +
Sbjct: 371 NIGEFFGDLGIKILEGFGLTETSPVMSVTEYHRQVYGTVGRIIPGIEVAIQNVDTGYIYS 430
Query: 319 --------PA--GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSR 368
PA +G + VRG VM+GY+ P T A+D DGW +TGDIG
Sbjct: 431 IQTHESFNPAFQSEEGEIIVRGHCVMKGYWNKPQETAVAIDVDGWFHTGDIG-------- 482
Query: 369 GRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAII 428
R G L + R K+ +V + G+NV P +E L+S I + ++G + AI+
Sbjct: 483 ---RFFKGNLQITDRLKNMLVNAYGKNVYPTPVENTYLKSPKIEGLFLVGDKREYITAIV 539
Query: 429 VPDKE 433
+P +E
Sbjct: 540 IPARE 544
>gi|371776873|ref|ZP_09483195.1| amp-dependent synthetase and ligase [Anaerophaga sp. HS1]
Length = 635
Score = 181 bits (459), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 135/489 (27%), Positives = 233/489 (47%), Gaps = 61/489 (12%)
Query: 4 IILLWGKKSSVAPDIVEEIPVFS----YDEIIDLGR---------ESRKAFSDSNDARKH 50
+I++ G + I++EIP+ +DE L + F ++N
Sbjct: 107 MIMVSGFQLPKIRQIIQEIPLIEKIIVFDETDSLEEKEVLLQEIYQRGTQFLETNSKSVE 166
Query: 51 YKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPW 110
+ + I +D+A YTSGTT PKG+ML+H+N + + + + + L++LP
Sbjct: 167 DRRKEIHYNDVANISYTSGTTAQPKGIMLSHRNYTANVEQAFSYIDIPSHYRTLAVLPWD 226
Query: 111 HVYERACGYFIFS-RGIEL--------MYTAVRNLKDDLQRYQPHYMISVPLVYETLYSG 161
H + + F RG + ++N +++ +PH ++SVP + +
Sbjct: 227 HAFAHTAALYAFMYRGASIASVQAGKTQLETLKNFAQNIREIKPHVLMSVPAIAKNFRKN 286
Query: 162 IQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARII 221
I+K + A+ V L R++ Y + Y G R + +
Sbjct: 287 IEKGVM----AKGKVIYTLFRVAMKYAVW---YNGTGNNR----------------GKGL 323
Query: 222 CAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSL-PMHIDLFYEAIGVKVQVGYGLTE 280
+ +PL+ L + L++K I++ G + GGG+L + + F+ AIG+ + GYGL+E
Sbjct: 324 KKLTYPLYYLFDNLIFKTIRANFGGNLQFFIGGGALLDIELQKFFYAIGIPMYQGYGLSE 383
Query: 281 SSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKN 340
+SP+I+A P + +GS G +N+ +IKI D E+ + LP G G + ++G VM GY+KN
Sbjct: 384 ASPIISANTPAHHKMGSSGRTVNNLDIKICD-ESGKALPPGQSGEIVIKGENVMLGYWKN 442
Query: 341 PSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLE 400
ATK+ + ++GWL TGD+G++ G L + GR K ++ S GE P
Sbjct: 443 EEATKETI-KNGWLYTGDLGYLDKD----------GYLYVLGRFKSLLISSDGEKYSPEG 491
Query: 401 LEEAAL-RSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTIS 459
+EEA + LI Q V+ +IVP+ E+V+ K LS + E EKT+
Sbjct: 492 IEEAVIDHCELIDQCVLHNNQNPYTIGLIVPNAEKVVQYFKSLS--NHLTKEQKLEKTLL 549
Query: 460 LLYGELRKW 468
+ EL ++
Sbjct: 550 AIQEELSQF 558
>gi|354610157|ref|ZP_09028113.1| Long-chain-fatty-acid--CoA ligase [Halobacterium sp. DL1]
gi|353194977|gb|EHB60479.1| Long-chain-fatty-acid--CoA ligase [Halobacterium sp. DL1]
Length = 644
Score = 181 bits (458), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 148/470 (31%), Positives = 230/470 (48%), Gaps = 69/470 (14%)
Query: 11 KSSVAPDIVEEIPVFSYDEIIDLGRES--RKAFSDSNDARKHYKYETIGSDDIATYVYTS 68
K V D V + S ++ + GRE+ R A+ D R + D+A+ +YTS
Sbjct: 160 KFVVTMDHVADADTLSLADLYERGREAYDRDAYESWIDERDY--------GDLASLIYTS 211
Query: 69 GTTGNPKGVMLTHKNL---LHQIRSLYDIVPA-------ENGDKFLSMLPPWHVYERACG 118
GTTG PKGV LTH+N L+Q R + P + + +S LP HV ER G
Sbjct: 212 GTTGKPKGVTLTHENFRANLNQSRKRFGPRPDKQDGQSIDETSRVVSYLPLAHVLERLAG 271
Query: 119 YFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 176
+F+ F+ G + Y + L++D QP SVP VYE L+ +++Q S R+
Sbjct: 272 HFLMFASGAHVCYAESPDTLQEDFGLVQPTSGTSVPRVYEKLFDAVREQATESPTKERI- 330
Query: 177 ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLV 236
+A + YE A +L +A++LV
Sbjct: 331 ------FEWAVDVGREYYE----------------------ADDPGLVLRGKRAVADRLV 362
Query: 237 YKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVL 295
++K++ A+G + + +SGGGSL + Y IG+ + GYGLTE+SPV++ +
Sbjct: 363 FEKVRDALGGNVEFFISGGGSLSPELCALYHGIGLPILEGYGLTETSPVVSVNPAEEPKV 422
Query: 296 GSVGHPINHTEIKI---VDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQAL-DED 351
G++G P+ T++++ V + + AG G + VRG QV GY++ P AT++A + D
Sbjct: 423 GTIGPPVPGTDLELDESVASPEQQERTAGRAGELLVRGPQVFDGYWELPEATEEAFVERD 482
Query: 352 G--WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSS 409
G W TGD+ I R G V LE RAK + LSTG+NV P +E+A S
Sbjct: 483 GQEWFRTGDVVEI---------REDGYVRFLE-RAKQLLTLSTGKNVAPGPIEDAFAASP 532
Query: 410 LIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI-VHADASELSKEKTI 458
L+ Q +V+G +Q+ AI+VP+ + V A + V AD +EL ++ +
Sbjct: 533 LVEQAMVVGDEQKFVSAIVVPNFDGVRRWAHNEDVDVPADDAELCRDDRV 582
>gi|379710628|ref|YP_005265833.1| long-chain-fatty-acid--CoA ligase [Nocardia cyriacigeorgica GUH-2]
gi|374848127|emb|CCF65199.1| Long-chain-fatty-acid--CoA ligase [Nocardia cyriacigeorgica GUH-2]
Length = 598
Score = 181 bits (458), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 137/421 (32%), Positives = 203/421 (48%), Gaps = 64/421 (15%)
Query: 19 VEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVM 78
+ +I + DE+I G +D +D H + +G+ AT +YTSGTTG PKGVM
Sbjct: 148 IAQIDKGAIDELISRG-------ADLDDQVVHERRAQVGASSPATLIYTSGTTGRPKGVM 200
Query: 79 LTHKNLLHQIRS----LYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAV- 133
LTH NL + +S L + G K L LP HV+ RA F + + +T+
Sbjct: 201 LTHANLWAESKSDRIALGKFIV--EGKKTLLFLPLAHVFARAVALAAFDAKVIVAHTSDW 258
Query: 134 RNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRI 193
L D ++PH+++SVP V+E +++ +++ + A I+++
Sbjct: 259 TTLVDQFAEFKPHFILSVPRVFEKVFNSAKQKAHDGGKGKIFDLAAETAIAYS------- 311
Query: 194 YEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVS 252
EG K + LV I H + +KLVY K++ A+G +A VS
Sbjct: 312 -EGL-----DKGGADLVTKIK--------------HFVFDKLVYSKLRVALGGQCEAAVS 351
Query: 253 GGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDA 312
GGG L + F+ +GV + GYGLTE++ I P +GSVG PI KI A
Sbjct: 352 GGGPLGARLGHFFRGVGVTIFEGYGLTETTAAITVNTPEHIRVGSVGRPIEGHAAKI--A 409
Query: 313 ETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSR 372
E E+L ++GS V GY+ N AT++A EDGW TGD+G I
Sbjct: 410 EDGELL---------LKGSVVFDGYWGNAEATEEAF-EDGWFKTGDLGAI---------- 449
Query: 373 RCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDK 432
G + + GR K+ IV + G+NV P LE++ LI Q++V+G Q GA+I D
Sbjct: 450 DADGFVTITGRKKEIIVTAGGKNVSPALLEDSLRAHPLISQVMVVGDGQPFVGALITLDP 509
Query: 433 E 433
E
Sbjct: 510 E 510
>gi|406883851|gb|EKD31364.1| hypothetical protein ACD_77C00342G0004 [uncultured bacterium]
Length = 624
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 126/433 (29%), Positives = 218/433 (50%), Gaps = 52/433 (12%)
Query: 28 DEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQ 87
D++I++G + D H +I ++D AT YTSGTT +PKGV+LTH+N
Sbjct: 157 DDVIEMGERFIEKEGDKFLEIGH----SIQNNDYATITYTSGTTADPKGVILTHRNYTAN 212
Query: 88 IRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIF----------SRGIELMYTAVRNLK 137
+ + K +LP H + G++I +G M T ++N+
Sbjct: 213 VEQALTCMTIPEKFKNFIILPLDHCFAHVVGFYIMISQGAIVATVQQGKSAMET-LKNIP 271
Query: 138 DDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGF 197
++ +P+ ++SVP + ++ I+ + + + ++++FAY +G+
Sbjct: 272 VNIMDVKPNLILSVPALAKSFKKNIENSVKSKGGFIWGLYNFALKVAFAYNR-----DGW 326
Query: 198 CLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGS- 256
+N +L PL LL +K+++ K++ A+G GGG+
Sbjct: 327 DRGKNG------------------TFLLHPLKLLFDKILFSKMRQAMGGELEFFVGGGAL 368
Query: 257 LPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNE 316
L + FY AIG+ + GYGL+E++P+I+A P + LGS G P+ EI+I+++E +
Sbjct: 369 LDKELQKFYYAIGIPMYQGYGLSEATPIISANTPNRHKLGSSGIPVKPLEIRIMNSE-GK 427
Query: 317 VLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGG 376
+LP G G + V+G VM GY+KNP +TK+ + +DGWL TGD+G++ P G
Sbjct: 428 ILPLGESGEIVVKGENVMAGYWKNPISTKETV-KDGWLYTGDLGFMDPD----------G 476
Query: 377 VLVLEGRAKDTIVLSTGENVEPLELEEAAL-RSSLIRQIVVIGQDQRRPGAIIVPDKEEV 435
L ++GR K ++ S GE P E+EE + +S++I+Q+++ A+IV DK
Sbjct: 477 FLHVKGRFKSLLIGSDGEKYSPEEIEEVIVTQSNIIQQMMLYNNQSAYTIAVIVADKNSP 536
Query: 436 LMAAKRLSIVHAD 448
L + + V D
Sbjct: 537 LKGRELIKAVWED 549
>gi|407693103|ref|YP_006817892.1| FAA1 protein [Actinobacillus suis H91-0380]
gi|407389160|gb|AFU19653.1| FAA1 protein [Actinobacillus suis H91-0380]
Length = 592
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 140/436 (32%), Positives = 209/436 (47%), Gaps = 66/436 (15%)
Query: 55 TIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENG--DKFLSMLPPWHV 112
+I DD+ T +YTSGTTG PKGVML NL HQ+++ +D+ E G D LS LP H+
Sbjct: 177 SIQLDDLFTIIYTSGTTGTPKGVMLDFSNLAHQLQA-HDLALPEVGPDDVSLSFLPFSHI 235
Query: 113 YERACGYFIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSA 171
+ERA ++ +G + Y N ++ L +P M +VP ++E +YS I ++ +
Sbjct: 236 FERAWVAYLLHKGATVCYLEDTNEVRTALAEVKPTLMCAVPRLFEKMYSAIFDKVKQAPF 295
Query: 172 ARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLL 231
RR + R ++ +G QK A L + L
Sbjct: 296 HRRALFRWALK------------QGKTFVHTQK------------------ATL--AYKL 323
Query: 232 AEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRP 290
A KLV K+++ +G + K GG L I F+ +IGV V++GYG+TE++ ++
Sbjct: 324 ANKLVLTKLRALLGGNIKMMPCGGAKLEPAIGEFFHSIGVNVKLGYGMTETTATVSCWTD 383
Query: 291 TCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDE 350
L S+G + + E+KI E NE+L VRG VM+GY+KNP T +A E
Sbjct: 384 RNFALNSIGTLMPNAEVKI--GEDNEIL---------VRGGMVMKGYYKNPEETAKAFTE 432
Query: 351 DGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSL 410
DG+L TGD G + H G L + R K+ + S G+ + P +E +
Sbjct: 433 DGFLRTGDAGALDEH----------GNLYITDRIKELMKTSNGKYIAPQYIEGKLAKDKF 482
Query: 411 IRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLLY 462
I QI VI ++ A+IVP E + AK+L+I + D EL K EK I L
Sbjct: 483 IEQIAVIADTKKYVSALIVPSFEALEEYAKQLNIRYHDRLELIKHSAVIQLFEKRIEELQ 542
Query: 463 GELRKWTSKCSFQIGP 478
EL + F + P
Sbjct: 543 QELAHFEQIKKFTLLP 558
>gi|330469354|ref|YP_004407097.1| AMP-dependent synthetase and ligase [Verrucosispora maris
AB-18-032]
gi|328812325|gb|AEB46497.1| AMP-dependent synthetase and ligase [Verrucosispora maris
AB-18-032]
Length = 618
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 128/381 (33%), Positives = 186/381 (48%), Gaps = 53/381 (13%)
Query: 58 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVP---AENGDKFLSMLPPWHVYE 114
S DIAT +YTSGTTG PKG +LTH+N+ I + ++P N L LP H +
Sbjct: 197 SVDIATIIYTSGTTGRPKGCVLTHRNMYSDIANAVPVLPNLFGPNASTLL-FLPLAHAFA 255
Query: 115 RACGYFIF-SRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 173
R + +R + V+NL +LQ +P +++SVP V+E +Y+G KQ ++
Sbjct: 256 RLIQIGVVQARATMAHCSDVKNLVPELQEIKPTFVLSVPRVFEKVYNG-AKQKAEAAGKG 314
Query: 174 RVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAE 233
++ ARA ++ AY+ G L L H L +
Sbjct: 315 KIFARAEA-VAIAYSEALETSAGPGLA------------------------LRVQHALFD 349
Query: 234 KLVYKKIQSAIG-ISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTC 292
KLVY K+++A+G + +SGG L + F+ +GV V GYGLTE+SP +A P
Sbjct: 350 KLVYGKLRAALGGRCRDAISGGAPLGARLGHFFRGVGVPVCEGYGLTETSPAASANLPGF 409
Query: 293 NVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDG 352
+G+VG P+ I+I D G V + G V QGY++N AT +A+ DG
Sbjct: 410 TRIGTVGRPLPGVTIRIAD-----------DGEVLIAGDIVFQGYWRNDEATAEAISSDG 458
Query: 353 WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIR 412
W TGD+G S G L + GR K+ IV ++G+NV P LE+ LI
Sbjct: 459 WFRTGDLG----------SLDGDGYLTITGRKKEIIVTASGKNVAPAVLEDQVRAHQLIS 508
Query: 413 QIVVIGQDQRRPGAIIVPDKE 433
Q VV+G Q A+I D+E
Sbjct: 509 QCVVVGDRQPFIAALITLDEE 529
>gi|430760195|ref|YP_007216052.1| Long-chain-fatty-acid--CoA ligase [Thioalkalivibrio nitratireducens
DSM 14787]
gi|430009819|gb|AGA32571.1| Long-chain-fatty-acid--CoA ligase [Thioalkalivibrio nitratireducens
DSM 14787]
Length = 625
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 129/388 (33%), Positives = 191/388 (49%), Gaps = 47/388 (12%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 118
D +AT VYTSGTTG PKGVML+H+ LL + P D FLS LP H ER G
Sbjct: 203 DSLATIVYTSGTTGRPKGVMLSHRALLFNAHAASRCAPLGGEDVFLSFLPLSHTLERTAG 262
Query: 119 YFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 176
F+ G E+++ ++ L +DL+ QP ++SVP +YE++Y+ IQ + SA R++
Sbjct: 263 CFLPMVVGAEVVFARSIPQLAEDLRVVQPTVLVSVPRIYESVYAKIQAGLKQKSALARLL 322
Query: 177 ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLV 236
R + +A F+ I Q++ W+ + L+A K+
Sbjct: 323 FRTTVDAGWAR--FEHI---------QQRAG---------WSPRLLLWPLLGRLVAHKV- 361
Query: 237 YKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLG 296
++ G + V GG LP I F+ +G+ V GYGLTE+SPV+ RP N+
Sbjct: 362 ---LERLGGRLEYAVCGGAPLPPSIARFFIGLGLPVYHGYGLTEASPVVTVNRPDENLPA 418
Query: 297 SVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNT 356
S+G P+ EI+I E +E+L R VM GY+++ AT +D DGWL+T
Sbjct: 419 SIGKPLPGVEIRI--GEQDELL---------TRSPSVMLGYWRDDEATAATIDPDGWLHT 467
Query: 357 GDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVV 416
GD I G + + GR KD IVL GE V P ++E + L Q++V
Sbjct: 468 GDKARIDAQ----------GFVFITGRIKDIIVLGNGEKVPPADMEMSIQLDPLFDQVLV 517
Query: 417 IGQDQRRPGAIIVPDKEEVLMAAKRLSI 444
IG+ + A++V D A+ L +
Sbjct: 518 IGEGRAFLSALVVLDAAAWREYARELDV 545
>gi|448599433|ref|ZP_21655337.1| acyl-CoA synthetase [Haloferax alexandrinus JCM 10717]
gi|445736894|gb|ELZ88434.1| acyl-CoA synthetase [Haloferax alexandrinus JCM 10717]
Length = 666
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 129/391 (32%), Positives = 188/391 (48%), Gaps = 58/391 (14%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPA--ENGDK--------FLSMLP 108
+D+A+ +YTSGTTG PKGV LTH N + Y + GD LS LP
Sbjct: 207 EDLASLIYTSGTTGQPKGVRLTHWNFRSNVNESYRRFGPRPDKGDTPVIGPDSVALSFLP 266
Query: 109 PWHVYERACGYFIF--SRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQI 166
HV+ER G+F+ + + L++D Q +P SVP VYE LY I+ Q
Sbjct: 267 LAHVFERMAGHFMMFAAGAAVAYAESPDTLREDFQLVRPTVGTSVPRVYEKLYDAIRAQA 326
Query: 167 FTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILW 226
S A +RV A + + AY P YL L
Sbjct: 327 SESPAKKRVFEWA-VGVGQAY-------------HTTDAPGYL---------------LT 357
Query: 227 PLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVI 285
H LA++LV+ +++ A+G + +SGGGSL + Y A+G+ + GYGLTE+SPVI
Sbjct: 358 AKHRLADRLVFGQVRDALGGNLDFFISGGGSLSAELCALYHAMGLPIYEGYGLTETSPVI 417
Query: 286 AARRPTCNVLGSVGHPINHTEIKIVDAETNEVL--PAGSKGIVKVRGSQVMQGYFKNPSA 343
+ P +G++G+P+ + E K+ + L G G + VRG V +GY+ +P
Sbjct: 418 SVNPPEAPKIGTIGYPLRNVETKLDTTVVGDQLGEAGGEVGELLVRGPSVTEGYWNDPEE 477
Query: 344 TKQALDEDG----WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPL 399
T+ A ED W TGD+ RR G + RAK +VLSTG+NV P
Sbjct: 478 TEAAFVEDDEGRRWFRTGDV----------VERRPDGYIAFRERAKQILVLSTGKNVAPG 527
Query: 400 ELEEAALRSSLIRQIVVIGQDQRRPGAIIVP 430
+E+A S ++ Q +V+G ++ A+IVP
Sbjct: 528 PIEDAFASSPVVEQCMVLGDGRKFVSALIVP 558
>gi|76802721|ref|YP_330816.1| long-chain-fatty-acid--CoA ligase [Natronomonas pharaonis DSM 2160]
gi|76558586|emb|CAI50178.1| acyl-CoA synthetase [Natronomonas pharaonis DSM 2160]
Length = 651
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 128/410 (31%), Positives = 199/410 (48%), Gaps = 61/410 (14%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLY-----------DIVPAENGDKFLSML 107
DD+A+ +YTSGTTG PKGV LTH+N + L D+ + D+ LS L
Sbjct: 211 DDLASLIYTSGTTGKPKGVQLTHRNFRSNVNGLRKRFAPRPDKDEDLPAIDERDRVLSFL 270
Query: 108 PPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQ 165
P HV+ER G+F+ F G + Y + + DD+Q +P SVP VYE +Y ++ +
Sbjct: 271 PLAHVFERVAGHFLMFGSGATVSYAESTDTVADDIQIVKPTGASSVPRVYERIYDSLRDE 330
Query: 166 IFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAIL 225
A V RA + I+ + N + P + L
Sbjct: 331 -----APEAVFNRA-VPIARQWA-------------NTESPGLGLKL------------- 358
Query: 226 WPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPV 284
+ L +KLVY ++ +G + + VSGGGSL + ++ +G+ + GYGLTE+SPV
Sbjct: 359 --KYKLMDKLVYSSVREQMGGNIEFFVSGGGSLSKQLAELFDGMGIPILEGYGLTETSPV 416
Query: 285 IAARRPTCNVLGSVGHPINHTEIKI---VDAETNEVLPAGSKGIVKVRGSQVMQGYFKNP 341
++ P G++G P+++ E+++ V ++ + G G + V+G V +GY+ P
Sbjct: 417 VSVNPPEDYRSGTLGPPLSNVEVRLDETVVSDDQKANADGDIGELHVKGPNVTEGYWNRP 476
Query: 342 SATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLEL 401
AT++A +DGW TGDI + L+ R K IVL TG+N+ P +
Sbjct: 477 GATEEAFTQDGWFRTGDI----------IEQTDDDYLIYHDRLKQLIVLDTGKNIAPQPI 526
Query: 402 EEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASE 451
E+ S I Q +VIG +Q+ A+ VP+ E V A + I D SE
Sbjct: 527 EDEFATSERIDQAMVIGDNQKFIAALFVPNLEAVERWADKEGIDLPDDSE 576
>gi|383758879|ref|YP_005437864.1| AMP-dependent synthetase and ligase [Rubrivivax gelatinosus IL144]
gi|381379548|dbj|BAL96365.1| AMP-dependent synthetase and ligase [Rubrivivax gelatinosus IL144]
Length = 608
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 126/400 (31%), Positives = 204/400 (51%), Gaps = 47/400 (11%)
Query: 56 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYER 115
+G +D+A VYTSGTTG PKGVMLTH+N++ ++++ + D FLS LP H +ER
Sbjct: 185 VGEEDLAALVYTSGTTGKPKGVMLTHRNVMANVKAVLARIAPRPDDVFLSFLPLSHTFER 244
Query: 116 ACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 173
GY++ + G + + + ++L +D++ +P +ISVP +YE ++ +Q + S+ +
Sbjct: 245 TAGYYLPIAAGSTVAFARSTQHLPEDMKTVRPTVLISVPRIYERVFVKLQTMLEGSALKK 304
Query: 174 RVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAE 233
R+ A ++R FC + P + A D A++WP LLA
Sbjct: 305 RLFDMA------QAVGWRR----FCREQKLPVPGSVPAAWD--------ALVWP--LLAS 344
Query: 234 KLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTC 292
+ V +Q+ G + VSGG +L I + +G+ + GYG+TES+PVI+ P
Sbjct: 345 R-VSAPLQAQFGGRLRLAVSGGAALSAPIARCFLGLGLPIVQGYGMTESTPVISCNTPED 403
Query: 293 NVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDG 352
N +VG P++ E++I D E+L VRG+ VM+GY+ P T +AL E G
Sbjct: 404 NDPATVGRPLDGVEVRIGD--NRELL---------VRGANVMRGYWNRPEDTARAL-EGG 451
Query: 353 WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIR 412
WL+TGD ++ GG + + GR K+ IV +TGE + P +LE A + L
Sbjct: 452 WLHTGD-----------QASLDGGRIRIVGRVKEIIVTATGEKIAPTDLEMAIVADPLFE 500
Query: 413 QIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASEL 452
G ++ ++V A+ L + AD + L
Sbjct: 501 SAWAFGDNRPFIACVVVLAAGPWERLARSLGLDPADPASL 540
>gi|420151040|ref|ZP_14658193.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 335 str. F0486]
gi|394751223|gb|EJF35022.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 335 str. F0486]
Length = 599
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 129/414 (31%), Positives = 216/414 (52%), Gaps = 49/414 (11%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYD-IVPAENGDKFLSMLPPWHVYERAC 117
DD+ T +YTSGTTG PKGVMLT++NL Q+ + + +N D L+ LP HV+ERA
Sbjct: 180 DDLFTIIYTSGTTGEPKGVMLTYENLAFQMVGHTERLSTVDNTDTSLAFLPLSHVFERAW 239
Query: 118 GYFIFSRGIELMYTAVRNL-KDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 176
YF + + + Y NL ++ L +P M +VP YE +++ + + SS V
Sbjct: 240 TYFCLYKAVTVYYLDDTNLVREALAEVRPTLMCAVPRFYEKIFATVHDRADASS----FV 295
Query: 177 ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLV 236
R L R++ A KR+ L K+PS+ +L + L +K+V
Sbjct: 296 KRKLFRLAIA--TGKRV---LALREQGKKPSF---------------VLQKAYNLFDKMV 335
Query: 237 YKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVL 295
YKK++ A+G K GG +L I F+++IG+ +++GYG+TE++ I+
Sbjct: 336 YKKLKEALGGRIKFMPCGGANLEPSIGRFFQSIGINLKLGYGMTETTATISCWGDDRINP 395
Query: 296 GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLN 355
SVG+ + + +++I E NE+L V+G VM+GY+KNP T +A DG+L
Sbjct: 396 QSVGNVMPNVQVRI--GEENEIL---------VKGGMVMKGYYKNPEETAKAFTPDGYLR 444
Query: 356 TGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIV 415
TGD G + +++ L + R K+ + S G+ + P +E + +LI QI
Sbjct: 445 TGDAGNLDGNNN----------LFITERIKELMKTSNGKYIAPQMIEGKVGKYNLIEQIA 494
Query: 416 VIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE-KTISLLYGELRKW 468
VI ++ A+IVP+ E + A K L++ + + +++ K + I + +L+K+
Sbjct: 495 VIADGKKFVSALIVPNYEMLSQALKDLNLKYKNTADMIKHSQVIEYIGKQLQKF 548
>gi|433429134|ref|ZP_20407305.1| acyl-CoA synthetase [Haloferax sp. BAB2207]
gi|432195189|gb|ELK51743.1| acyl-CoA synthetase [Haloferax sp. BAB2207]
Length = 666
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 129/391 (32%), Positives = 188/391 (48%), Gaps = 58/391 (14%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPA--ENGDK--------FLSMLP 108
+D+A+ +YTSGTTG PKGV LTH N + Y + GD LS LP
Sbjct: 207 EDLASLIYTSGTTGQPKGVRLTHWNFRSNVNESYRRFGPRPDKGDTPVIGPDSVALSFLP 266
Query: 109 PWHVYERACGYFIF--SRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQI 166
HV+ER G+F+ + + L++D Q +P SVP VYE LY I+ Q
Sbjct: 267 LAHVFERMAGHFMMFAAGAAVAYAESPDTLREDFQLVRPTVGTSVPRVYEKLYDAIRAQA 326
Query: 167 FTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILW 226
S A +RV A + + AY P YL L
Sbjct: 327 SESPAKKRVFEWA-VGVGQAY-------------HTTDAPGYL---------------LT 357
Query: 227 PLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVI 285
H LA++LV+ +++ A+G + +SGGGSL + Y A+G+ + GYGLTE+SPVI
Sbjct: 358 AKHRLADRLVFGQVRDALGGNLDFFISGGGSLSAELCALYHAMGLPIYEGYGLTETSPVI 417
Query: 286 AARRPTCNVLGSVGHPINHTEIKIVDAETNEVL--PAGSKGIVKVRGSQVMQGYFKNPSA 343
+ P +G++G+P+ + E K+ + L G G + VRG V +GY+ +P
Sbjct: 418 SVNPPEAPKIGTIGYPLRNVETKLDTTVVGDQLGDAGGEVGELLVRGPSVTEGYWNDPEE 477
Query: 344 TKQALDEDG----WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPL 399
T+ A ED W TGD+ RR G + RAK +VLSTG+NV P
Sbjct: 478 TEAAFVEDDEGRRWFRTGDV----------VERRPDGYIAFRERAKQILVLSTGKNVAPG 527
Query: 400 ELEEAALRSSLIRQIVVIGQDQRRPGAIIVP 430
+E+A S ++ Q +V+G ++ A+IVP
Sbjct: 528 PIEDAFASSPVVEQCMVLGDGRKFVSALIVP 558
>gi|448566848|ref|ZP_21637103.1| acyl-CoA synthetase [Haloferax prahovense DSM 18310]
gi|445713437|gb|ELZ65214.1| acyl-CoA synthetase [Haloferax prahovense DSM 18310]
Length = 666
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 133/422 (31%), Positives = 199/422 (47%), Gaps = 58/422 (13%)
Query: 28 DEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQ 87
D+++ LG R+ ++A + +D+A+ +YTSGTTG PKGV LTH N
Sbjct: 176 DDVLTLGELYRRGEEVYDEAAYESWLDEREPEDLASLIYTSGTTGQPKGVQLTHWNFRSN 235
Query: 88 IRSLYDIVPA--ENGDK--------FLSMLPPWHVYERACGYFIF--SRGIELMYTAVRN 135
+ Y + GD LS LP HV+ER G+F+ + +
Sbjct: 236 VNESYRRFGPRPDKGDTPVIGPDSVALSFLPLAHVFERMAGHFMMFAAGAAVAYAESPDT 295
Query: 136 LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYE 195
L++D Q +P SVP VYE LY I+ Q S A +R+ A + + AY
Sbjct: 296 LREDFQLVRPTTGTSVPRVYEKLYDAIRAQASESPAKKRIFEWA-VGVGQAY-------- 346
Query: 196 GFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGG 254
P YL L H LA++LV+ +++ A+G + +SGG
Sbjct: 347 -----HTTDAPGYL---------------LTAKHRLADRLVFGQVREALGDNLDFFISGG 386
Query: 255 GSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAET 314
GSL + Y A+G+ + GYGLTE+SPVI+ P +G++G+P+ + E K+
Sbjct: 387 GSLSAELCALYHAMGLPIYEGYGLTETSPVISVNPPEEPKIGTIGYPLRNVETKLDTTVV 446
Query: 315 NEVL--PAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDG----WLNTGDIGWIAPHHSR 368
+ L G G + VRG V GY+ NP T+ A ED W TGD+ + P
Sbjct: 447 GDQLGDAGGEVGELLVRGPNVTAGYWNNPEETEAAFVEDDEGERWFRTGDVVELRPD--- 503
Query: 369 GRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAII 428
G + RAK +VLSTG+NV P +E+A S ++ Q +V+G ++ A+I
Sbjct: 504 -------GYIAFRERAKQILVLSTGKNVAPGPIEDAFASSPVVEQCMVLGDGRKFVSALI 556
Query: 429 VP 430
VP
Sbjct: 557 VP 558
>gi|256820350|ref|YP_003141629.1| AMP-dependent synthetase and ligase [Capnocytophaga ochracea DSM
7271]
gi|256581933|gb|ACU93068.1| AMP-dependent synthetase and ligase [Capnocytophaga ochracea DSM
7271]
Length = 599
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 129/414 (31%), Positives = 216/414 (52%), Gaps = 49/414 (11%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYD-IVPAENGDKFLSMLPPWHVYERAC 117
DD+ T +YTSGTTG PKGVMLT++NL Q+ + + +N D L+ LP HV+ERA
Sbjct: 180 DDLFTIIYTSGTTGEPKGVMLTYENLAFQMVGHTERLSTVDNTDTSLAFLPLSHVFERAW 239
Query: 118 GYFIFSRGIELMYTAVRNL-KDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 176
YF + + + Y NL ++ L +P M +VP YE +++ + + SS V
Sbjct: 240 TYFCLYKAVTVYYLDDTNLVREALAEVRPTLMCAVPRFYEKIFATVHDRADASS----FV 295
Query: 177 ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLV 236
R L R++ A KR+ L K+PS+ +L + L +K+V
Sbjct: 296 KRKLFRLAIA--TGKRV---LALREQGKKPSF---------------VLQKAYNLFDKMV 335
Query: 237 YKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVL 295
YKK++ A+G K GG +L I F+++IG+ +++GYG+TE++ I+
Sbjct: 336 YKKLKEALGGRIKFMPCGGANLEPSIGRFFQSIGINLKLGYGMTETTATISCWGDDRINP 395
Query: 296 GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLN 355
SVG+ + + +++I E NE+L V+G VM+GY+KNP T +A DG+L
Sbjct: 396 QSVGNVMPNVQVRI--GEENEIL---------VKGGMVMKGYYKNPEETAKAFTPDGYLR 444
Query: 356 TGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIV 415
TGD G + +++ L + R K+ + S G+ + P +E + +LI QI
Sbjct: 445 TGDAGNLDGNNN----------LFITERIKELMKTSNGKYIAPQMIEGKVGKYNLIEQIA 494
Query: 416 VIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE-KTISLLYGELRKW 468
VI ++ A+IVP+ E + A K L++ + + +++ K + I + +L+K+
Sbjct: 495 VIADGKKFVSALIVPNYEMLSQALKDLNLKYKNTADMIKHSQVIEYIGKQLQKF 548
>gi|184201148|ref|YP_001855355.1| putative fatty-acid--CoA ligase [Kocuria rhizophila DC2201]
gi|183581378|dbj|BAG29849.1| putative fatty-acid--CoA ligase [Kocuria rhizophila DC2201]
Length = 602
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 126/385 (32%), Positives = 195/385 (50%), Gaps = 51/385 (13%)
Query: 53 YETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPA--ENGDKFLSMLPPW 110
Y+ + DD AT +YTSGTTG PKG LTH+N + ++ + G + L LP
Sbjct: 176 YDGVSLDDAATLIYTSGTTGPPKGCELTHRNFVACSQNAIPVAGELMHEGARTLLFLPLA 235
Query: 111 HVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTS 169
HV+ R GI L +T V L DDL R++P ++++VP V+E + +G + +
Sbjct: 236 HVFARFVEVTSLDAGIALAHTPDVSQLMDDLARFKPTFILAVPRVFEKILAGARFKAQAG 295
Query: 170 SAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLH 229
S ++++ + + A++ + + + P WL AR H
Sbjct: 296 SPVKKLIFERAVATAAAWSKASQ--------QGRVSP--------WLAAR---------H 330
Query: 230 LLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAAR 288
L +KLVY ++ A+G + VSGG +L ++ F+ IGV V GYGLTE++ I+A
Sbjct: 331 RLYDKLVYSTLREAMGGEVRYAVSGGAALGEYLAHFFNGIGVFVVEGYGLTETTAPISAN 390
Query: 289 RPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQAL 348
P+ N LG+VGHP+ E+ I AE E+L VRG V + Y P T +A
Sbjct: 391 VPSINRLGTVGHPMPGNEVAI--AEDGEIL---------VRGVNVFERYNGLPEKTAEAF 439
Query: 349 DEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRS 408
DGW TGD+G + G+L + GR K+ IV ++G+NV P +LE+ S
Sbjct: 440 -RDGWFATGDLGHLDDE----------GLLTVTGRKKEIIVTASGKNVIPTQLEDPIRAS 488
Query: 409 SLIRQIVVIGQDQRRPGAIIVPDKE 433
+ + QI+V+G ++ A+I D E
Sbjct: 489 ATVGQIMVVGDNRPFVAALITLDPE 513
>gi|284163671|ref|YP_003401950.1| AMP-dependent synthetase and ligase [Haloterrigena turkmenica DSM
5511]
gi|284013326|gb|ADB59277.1| AMP-dependent synthetase and ligase [Haloterrigena turkmenica DSM
5511]
Length = 652
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 143/452 (31%), Positives = 218/452 (48%), Gaps = 72/452 (15%)
Query: 24 VFSYDEIIDLGRES--RKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTH 81
+++ DE+ D G E+ +A+ DA + DD+A+ +YTSGTTG PKGV LTH
Sbjct: 177 IYTLDEVYDRGAETFDLEAYEKRLDA--------VELDDLASLIYTSGTTGQPKGVQLTH 228
Query: 82 KNL---LHQIRSLY-------DIVPAENGDKF-LSMLPPWHVYERACGYFI-FSRGIELM 129
N ++ IR + D VP + + +S LP HV+ER G+F+ F+ G +
Sbjct: 229 WNFRSNVNAIRKRFARRPDRDDDVPTLDEESLAMSYLPLAHVFERTAGHFVLFASGSCIA 288
Query: 130 YT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYT 188
Y + L++D P SVP VYE +Y GI++Q S A R++ A + AY
Sbjct: 289 YAESPDTLQEDFSAVGPTTATSVPRVYEKIYDGIREQASESGAKRKIFEWA-TDVGVAY- 346
Query: 189 AFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS- 247
+ P IL LA+KLV+ ++ A+G
Sbjct: 347 ------------QRADSPG---------------PILRAKQALADKLVFSTVREALGGEI 379
Query: 248 KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEI 307
+SGGGSL + Y A+G+ + GYGLTE++PV++ P +G++G +++ ++
Sbjct: 380 DLLISGGGSLSPELCQLYHAMGLPIFEGYGLTETAPVVSTNPPDATKIGTIGPALSNVDL 439
Query: 308 K----IVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQAL--DEDG--WLNTGDI 359
+ + D E + P G G + V G V +GY+ P AT+ A D+DG W TGDI
Sbjct: 440 RVDETVADQEAFDGDP-GEVGELLVAGPNVTEGYWNKPGATQGAFTEDDDGERWFRTGDI 498
Query: 360 GWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQ 419
+ P G L R K IVLSTG+NV P +E+A S ++ Q +V+G
Sbjct: 499 VHLRPD----------GYLEFRDRLKQLIVLSTGKNVAPGPIEDAFAASEVVEQAMVVGD 548
Query: 420 DQRRPGAIIVPDKEEVLMAAKRLSIVHADASE 451
++ GA++VP+ V A I D E
Sbjct: 549 GEKFIGALLVPNTAHVREWADEEGIDLPDDPE 580
>gi|429757066|ref|ZP_19289623.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 324 str. F0483]
gi|429169713|gb|EKY11454.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 324 str. F0483]
Length = 599
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 131/414 (31%), Positives = 215/414 (51%), Gaps = 49/414 (11%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYD-IVPAENGDKFLSMLPPWHVYERAC 117
DD+ T +YTSGTTG PKGVMLT++NL Q+ + + +N D L+ LP HV+ERA
Sbjct: 180 DDLFTIIYTSGTTGEPKGVMLTYENLAFQMVGHTERLSTVDNTDTSLAFLPLSHVFERAW 239
Query: 118 GYFIFSRGIELMYTAVRNL-KDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 176
YF + I + Y NL ++ L +P M +VP YE +++ + + SS V
Sbjct: 240 TYFCLYKAITVYYLDDTNLVREALAEVRPTLMCAVPRFYEKIFATVHDRADASS----FV 295
Query: 177 ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLV 236
R L R++ A KR+ L K+PS+ +L + L +K+V
Sbjct: 296 KRKLFRLAIA--TGKRV---LALREQGKKPSF---------------VLQKAYNLFDKMV 335
Query: 237 YKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVL 295
YKK++ A+G K GG +L I F+++IG+ +++GYG+TE++ I+
Sbjct: 336 YKKLKEALGGRIKFMPCGGANLEPSIGRFFQSIGINLKLGYGMTETTATISCWGDDRINP 395
Query: 296 GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLN 355
SVG+ + + +++I E NE+L V+G VM+GY+KNP T +A DG+L
Sbjct: 396 QSVGNVMPNVQVRI--GEENEIL---------VKGGMVMKGYYKNPEETAKAFTPDGYLR 444
Query: 356 TGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIV 415
TGD G + +++ L + R K+ + S G+ + P +E + +LI QI
Sbjct: 445 TGDAGNLDGNNN----------LFITERIKELMKTSNGKYIAPQMIEGKVGKYNLIEQIA 494
Query: 416 VIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE-KTISLLYGELRKW 468
VI ++ A+IVP+ E + A K L+I + +++ K + I + +L+K+
Sbjct: 495 VIADGKKFVSALIVPNYEMLSQALKDLNIKCKNTADMIKHSQVIEYIGKQLQKF 548
>gi|326797469|ref|YP_004315288.1| long-chain-fatty-acid--CoA ligase [Sphingobacterium sp. 21]
gi|326548233|gb|ADZ76618.1| Long-chain-fatty-acid--CoA ligase [Sphingobacterium sp. 21]
Length = 597
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 134/407 (32%), Positives = 199/407 (48%), Gaps = 54/407 (13%)
Query: 56 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYER 115
I DD+ T +YTSGTTG+PKGV L+HKNL+ ++P EN +S LP H++ER
Sbjct: 167 IHEDDLLTLIYTSGTTGSPKGVFLSHKNLVSNFTDCAHLLP-ENYKTAISFLPLCHIFER 225
Query: 116 ACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARR 174
Y F +GI + Y + + D+ +P+ +VP V E +Y I +
Sbjct: 226 MVVYLYFYKGISVYYAENMDTIVADINDVKPNGFTTVPRVLEKVYDKIVDK--------- 276
Query: 175 VVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEK 234
+AL I A + L K+P + + +I AI A K
Sbjct: 277 --GKALTGIKHAL-----FFWALDLGLKFKEPRK-----NSFFYKIKLAI-------ARK 317
Query: 235 LVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCN 293
L++KK Q A+G + G+ SGG +L + + A G+ V GYGLTE+SPVIA N
Sbjct: 318 LIFKKWQMALGGNIVGIISGGAALQERLARVFWAAGIPVLEGYGLTETSPVIAVNNFERN 377
Query: 294 VLG--SVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDED 351
LG +VG + ++KI S G + +G V +GY+KN AT++A DED
Sbjct: 378 GLGFGTVGPLLKSVKVKI-----------ASDGEILCKGPNVTKGYYKNDEATREAFDED 426
Query: 352 GWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLI 411
G+ TGDIG + G L + R K+ + G+ V P +E + S+LI
Sbjct: 427 GYFKTGDIGELTTE----------GFLRITDRKKEMFKTAGGKYVAPQIIENKFMESTLI 476
Query: 412 RQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTI 458
QI+VIG+ +R P A+IVP EE+ A + I + +L K+ +
Sbjct: 477 AQIMVIGEGKRFPAALIVPAFEELKKWAGKNGISGSTKEDLIKDPKV 523
>gi|228471964|ref|ZP_04056732.1| long-chain-fatty-acid--CoA ligase family protein [Capnocytophaga
gingivalis ATCC 33624]
gi|228276576|gb|EEK15289.1| long-chain-fatty-acid--CoA ligase family protein [Capnocytophaga
gingivalis ATCC 33624]
Length = 597
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 131/440 (29%), Positives = 220/440 (50%), Gaps = 60/440 (13%)
Query: 60 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGY 119
DI T +YTSGTTGNPKGV++ ++N+ +Q + D + G+ LS LP HVYER
Sbjct: 180 DIYTIIYTSGTTGNPKGVLIDYENVAYQFINHDDRLAVVEGNVSLSFLPLSHVYERMWVA 239
Query: 120 FIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 178
++ +G+ Y N + + L+ +PHYM VP + E +Y+ I + + S +R+V
Sbjct: 240 YVLHKGVINCYLDDTNRVAEVLKEVRPHYMCVVPRLLEKIYTKIYENVEKQSVLKRLVFA 299
Query: 179 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 238
RI A R +G K+PS+L L + +A+++V++
Sbjct: 300 TATRI--AKIQLGRKKKG-------KKPSFL---------------LQKAYNVADRVVFQ 335
Query: 239 KIQSAIGISKAGVSGGGS-LPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 297
K+++A+G + + GG+ L I F+ AIGV V +GYG+TE++ ++ L S
Sbjct: 336 KLKAALGGNIQMIPCGGALLEPSIGRFFRAIGVNVTLGYGMTETTATVSCWDDHKFKLKS 395
Query: 298 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 357
VG + + ++KI E NE+L ++G + +GY+ NP +A EDG+L TG
Sbjct: 396 VGTLVPNMQVKI--GENNEIL---------LKGGSITKGYYNNPEENAKAFTEDGFLRTG 444
Query: 358 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 417
D G+I G L + R K+ + S G+ + P ++E + S I QI +I
Sbjct: 445 DAGYIDKE----------GNLFITERIKELMKTSNGKYIAPQQIEGKVGKDSFIEQIAII 494
Query: 418 GQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLLYGELRKWT 469
++ A+IVP+ + + AK L++ + + +EL K +K + L EL +
Sbjct: 495 ADARKYVSALIVPNYDALAEYAKSLNLKYKNYAELIKNSQIVEFFQKRLQNLQQELASYE 554
Query: 470 SKCSFQIGPIHVVDEPFTVN 489
QI ++ PF++N
Sbjct: 555 -----QIKKFTLLTTPFSIN 569
>gi|322513780|ref|ZP_08066867.1| long-chain-fatty-acid--CoA ligase [Actinobacillus ureae ATCC 25976]
gi|322120411|gb|EFX92337.1| long-chain-fatty-acid--CoA ligase [Actinobacillus ureae ATCC 25976]
Length = 592
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 137/432 (31%), Positives = 207/432 (47%), Gaps = 66/432 (15%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENG--DKFLSMLPPWHVYERA 116
DD+ T +YTSGTTG PKGVML NL HQ+++ +D+ E G D LS LP H++ERA
Sbjct: 181 DDLFTLIYTSGTTGTPKGVMLDFSNLAHQLQA-HDLALPEVGPDDVSLSFLPFSHIFERA 239
Query: 117 CGYFIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 175
++ +G + Y N ++ L +P M +VP +YE +YSGI ++ + RR
Sbjct: 240 WVAYLLHKGATVCYLEDTNEVRTALAEVKPTLMCAVPRLYEKMYSGIFDKVKQAPFYRRA 299
Query: 176 VARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKL 235
+ + ++ +G QK + LA+KL
Sbjct: 300 LFQWALK------------QGKHFVHTQKATF--------------------TYKLADKL 327
Query: 236 VYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNV 294
V K+++ +G + K GG L I F+ +IG+ V++GYG+TE++ ++
Sbjct: 328 VLSKLRALLGGNIKMMPCGGAKLEPTIGEFFHSIGINVKLGYGMTETTATVSCWADRNFA 387
Query: 295 LGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWL 354
L S+G + + E+KI D NE+L VRG VM+GY+KNP T +A EDG+L
Sbjct: 388 LNSIGTLMPNAEVKIGD--DNEIL---------VRGGMVMKGYYKNPQETAKAFTEDGFL 436
Query: 355 NTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQI 414
TGD G + H G L + R K+ + S G+ + P +E + I QI
Sbjct: 437 RTGDAGALDEH----------GNLYITDRIKELMKTSNGKYIAPQYIEGKLAKDKFIEQI 486
Query: 415 VVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLLYGELR 466
VI ++ A+IVP E + AK+L+I + D EL K EK I L EL
Sbjct: 487 AVIADTKKYVSALIVPSFEALEEYAKQLNIKYHDRLELIKHSAVIQLFEKRIEELQQELP 546
Query: 467 KWTSKCSFQIGP 478
+ F + P
Sbjct: 547 HFEQIKKFTLLP 558
>gi|451971092|ref|ZP_21924314.1| putative long-chain-fatty-acid--CoA ligase [Vibrio alginolyticus
E0666]
gi|451932908|gb|EMD80580.1| putative long-chain-fatty-acid--CoA ligase [Vibrio alginolyticus
E0666]
Length = 602
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 131/437 (29%), Positives = 209/437 (47%), Gaps = 55/437 (12%)
Query: 52 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWH 111
+ E DD+ T +YTSGTTG PKGVML + N+ Q+ + D L LP H
Sbjct: 171 RLEQAKDDDLLTLIYTSGTTGQPKGVMLDYANIAAQLEGHDQRLSLSQSDVSLCFLPLSH 230
Query: 112 VYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSS 170
V+ERA +++ +G Y ++D L + QP M +VP YE ++S I +++ +
Sbjct: 231 VFERAWTFYVLYKGATNCYLQDTMQVRDALSQVQPTVMCAVPRFYEKIFSAIHEKVSRAP 290
Query: 171 AARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHL 230
R+++ + + A C + ++QPS + L +
Sbjct: 291 IHRKIMFTWAVNMGAKMAA--------C-HQEKRQPSLM---------------LRKSYA 326
Query: 231 LAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARR 289
LA+KLV K+++ +G + GG L I F+ AIG+ V++GYG+TE++ ++
Sbjct: 327 LADKLVLSKLRALLGGKINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTATVSCWD 386
Query: 290 PTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALD 349
C S+G + ++KI E NE+L VRG VM+GY+K P T++ D
Sbjct: 387 DKCFNPDSIGMSMPGAQVKI--GENNEIL---------VRGPMVMRGYYKMPEETEKTFD 435
Query: 350 EDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSS 409
E G+L TGD G+I + G L + R K+ + S G+ + P +E A +
Sbjct: 436 EHGFLKTGDAGYIDEN----------GNLFITDRIKELMKTSGGKYIAPQMIEGAIGKDH 485
Query: 410 LIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLL 461
I QI VI ++ A+IVP + + AK L+I + D EL K EK ++ L
Sbjct: 486 FIEQIAVIADTRKFVSALIVPCFDSLEEYAKELNIKYHDRVELIKHHQVVEMLEKRVNDL 545
Query: 462 YGELRKWTSKCSFQIGP 478
EL K+ F++ P
Sbjct: 546 QKELAKFEQVKKFKLLP 562
>gi|54307638|ref|YP_128658.1| long-chain-fatty-acid-CoAligase [Photobacterium profundum SS9]
gi|46912061|emb|CAG18856.1| putative long-chain-fatty-acid-CoAligase [Photobacterium profundum
SS9]
Length = 604
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 130/415 (31%), Positives = 197/415 (47%), Gaps = 47/415 (11%)
Query: 46 DARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLS 105
+A + DD+ T +YTSGTTG PKGVML + N+ Q+ + + GD L
Sbjct: 165 EAELQQRLNDTAMDDLLTLIYTSGTTGTPKGVMLDYANIAAQLAGHDQNLSLDEGDSSLC 224
Query: 106 MLPPWHVYERACGYFIFSRG-IELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQK 164
LP HV+ERA +++ RG I T LK+ L +P+ M +VP VYE +YS +
Sbjct: 225 FLPLSHVFERAWTFYVLHRGAINHYLTDTNQLKEALADVKPNVMAAVPRVYEKIYSTVHD 284
Query: 165 QIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAI 224
++ + R+++ ++A R+ C + +QPS L+ +
Sbjct: 285 KVSRAPFHRKLI------FTWAVNMGARM--AVC-HQEHRQPSKLLTMS----------- 324
Query: 225 LWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSP 283
H LA KLV K++ +G + K GG L I F+ AIG+ V++GYG+TE++
Sbjct: 325 ----HNLANKLVLSKLRDILGGNIKFMPCGGAKLDEGIGRFFHAIGINVKLGYGMTETTA 380
Query: 284 VIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSA 343
++ C S+G + EIKI E NE+L VRG VM+GY+ P
Sbjct: 381 TVSCWDDQCFNPDSIGMAMPGAEIKI--GENNEIL---------VRGPMVMRGYYNMPEE 429
Query: 344 TKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEE 403
T + EDG+L TGD G G L + R K+ + S G+ + P +E
Sbjct: 430 TAKNFTEDGFLKTGDAGHFDEQ----------GNLFITDRIKELMKTSGGKYIAPQVIEG 479
Query: 404 AALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTI 458
A + I QI VI ++ A+IVP + + A+ L+I + D EL K I
Sbjct: 480 AIGKDHFIEQIAVIADTRKFVSALIVPCFDTLEEHARELNIKYKDRLELVKNSQI 534
>gi|393780659|ref|ZP_10368867.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 412 str. F0487]
gi|392608113|gb|EIW90975.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 412 str. F0487]
Length = 599
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 130/414 (31%), Positives = 216/414 (52%), Gaps = 49/414 (11%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYD-IVPAENGDKFLSMLPPWHVYERAC 117
DD+ T +YTSGTTG PKGVMLT++NL Q+ + + +N D L+ LP HV+ERA
Sbjct: 180 DDLFTIIYTSGTTGEPKGVMLTYENLAFQMVGHTERLSTVDNTDTSLAFLPLSHVFERAW 239
Query: 118 GYFIFSRGIELMYTAVRNL-KDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 176
YF + + + Y NL ++ L +P M +VP YE +++ + + SS V
Sbjct: 240 TYFCLYKAVTVYYLDDTNLVREALAEVRPTLMCAVPRFYEKIFATVHDRADASS----FV 295
Query: 177 ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLV 236
R L R++ A KR+ L K+PS+ +L + L +K+V
Sbjct: 296 KRKLFRLAIA--TGKRV---LTLREQGKKPSF---------------VLQKAYNLFDKMV 335
Query: 237 YKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVL 295
YKK++ A+G K GG +L I F+++IG+ +++GYG+TE++ I+
Sbjct: 336 YKKLKEALGGRIKFMPCGGANLEPSIGRFFQSIGINLKLGYGMTETTATISCWGDDRINP 395
Query: 296 GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLN 355
SVG+ + + +++I E NE+L V+G VM+GY+KNP T +A DG+L+
Sbjct: 396 QSVGNVMPNVQVRI--GEENEIL---------VKGGMVMKGYYKNPEETAKAFTPDGYLH 444
Query: 356 TGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIV 415
TGD G + +++ L + R K+ + S G+ + P +E + +LI QI
Sbjct: 445 TGDAGNLDGNNN----------LFITERIKELMKTSNGKYIAPQMIEGKVGKYNLIEQIA 494
Query: 416 VIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE-KTISLLYGELRKW 468
VI ++ A+IVP+ E + A K L+I + +++ K + I + +L+K+
Sbjct: 495 VIADGKKFVSALIVPNYEMLSQALKDLNIKCKNTADMIKHSQVIEYIGKQLQKF 548
>gi|348171460|ref|ZP_08878354.1| putative long-chain fatty acid ligase [Saccharopolyspora spinosa
NRRL 18395]
Length = 592
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 132/414 (31%), Positives = 209/414 (50%), Gaps = 60/414 (14%)
Query: 26 SYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLL 85
+ DE+ LG +D ++ H + + ++D+AT +YTSGTTG PKG +LTH+N+L
Sbjct: 148 AVDELTALG-------ADVDNRDLHLRRRAVRAEDVATLIYTSGTTGRPKGCVLTHRNML 200
Query: 86 HQIRSLYDIVP--AENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQR 142
++R+ + P G+ L LP HV RA + L +T+ V++L DL
Sbjct: 201 AEVRADIEAFPQLTRPGNSMLMFLPMAHVLARAITVMCVYGRVTLGHTSDVKDLVTDLSS 260
Query: 143 YQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRN 202
++P ++++VP V+E +Y+ +++ S R + I+ AY+ + + +G
Sbjct: 261 FRPTFVLAVPRVFEKVYNTAKQKAHGSGKGR--IFDLAEDIAVAYS--RAVDDGG----- 311
Query: 203 QKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIG-ISKAGVSGGGSLPMHI 261
+ L H L +KLVY K+++A+G A VSGG L +
Sbjct: 312 ------------------VGLGLKLKHTLFDKLVYGKLRAALGGRCIAAVSGGAPLGERL 353
Query: 262 DLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAG 321
F+ +GV V GYGLTE++ A + +G+VG P+ T ++I AE EVL
Sbjct: 354 AHFFRGVGVPVLEGYGLTETTAAAAVNVESAFKVGTVGKPVAGTSVRI--AEDGEVL--- 408
Query: 322 SKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLE 381
++G V + Y+ NP ATK++L EDGW +TGD+G + G L +
Sbjct: 409 ------IKGDVVFREYWNNPLATKESL-EDGWFHTGDLGSLDDE----------GFLKIT 451
Query: 382 GRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 435
GR K+ IV + G+NV P LE+A LI Q +V+G + GA+I D E V
Sbjct: 452 GRKKEIIVTAGGKNVAPAVLEDALRAHPLISQCMVVGDQKPFIGALITLDPEFV 505
>gi|429747308|ref|ZP_19280584.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 380 str. F0488]
gi|429163446|gb|EKY05672.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 380 str. F0488]
Length = 599
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 130/414 (31%), Positives = 215/414 (51%), Gaps = 49/414 (11%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYD-IVPAENGDKFLSMLPPWHVYERAC 117
DD+ T +YTSGTTG PKGVMLT++NL Q+ + + +N D L+ LP HV+ERA
Sbjct: 180 DDLFTIIYTSGTTGEPKGVMLTYQNLAFQMVGHTERLSTVDNTDTSLAFLPLSHVFERAW 239
Query: 118 GYFIFSRGIELMYTAVRNL-KDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 176
YF + + + Y NL ++ L +P M +VP YE +++ + + SS V
Sbjct: 240 TYFCLYKAVTVYYLDDTNLVREALAEVRPTLMCAVPRFYEKIFATVHDRADASS----FV 295
Query: 177 ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLV 236
R L R++ A KR+ L K+PS+ +L + L +K+V
Sbjct: 296 KRKLFRLAIA--TGKRV---LALREQGKKPSF---------------VLQKAYNLFDKMV 335
Query: 237 YKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVL 295
YKK++ A+G K GG +L I F+++IG+ +++GYG+TE++ I+
Sbjct: 336 YKKLKEALGGRIKFMPCGGANLEPSIGRFFQSIGINLKLGYGMTETTATISCWGDDRINP 395
Query: 296 GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLN 355
SVG+ + + +++I E NE+L V+G VM+GY+KNP T +A DG+L
Sbjct: 396 QSVGNVMPNVQVRI--GEENEIL---------VKGGMVMKGYYKNPEETAKAFTPDGYLR 444
Query: 356 TGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIV 415
TGD G + +++ L + R K+ + S G+ + P +E + +LI QI
Sbjct: 445 TGDAGNLDGNNN----------LFITERIKELMKTSNGKYIAPQMIEGKVGKYNLIEQIA 494
Query: 416 VIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE-KTISLLYGELRKW 468
VI ++ A+IVP+ E + A K L+I + +++ K + I + +L+K+
Sbjct: 495 VIADGKKFVSALIVPNYEMLSQALKDLNIKCKNTADMIKHSQVIEYIGKQLQKF 548
>gi|390948342|ref|YP_006412102.1| AMP-forming long-chain acyl-CoA synthetase [Alistipes finegoldii
DSM 17242]
gi|390424911|gb|AFL79417.1| AMP-forming long-chain acyl-CoA synthetase [Alistipes finegoldii
DSM 17242]
Length = 635
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 135/454 (29%), Positives = 217/454 (47%), Gaps = 62/454 (13%)
Query: 56 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYER 115
IG+DD AT YTSGTT +PKGV+LTH+N + + + + L +LP H +
Sbjct: 172 IGNDDYATITYTSGTTADPKGVVLTHRNYTANVEQSLSRIDIPSSFRTLIILPLDHCFAH 231
Query: 116 ACGYFIF----------SRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQ 165
G++I G M T ++N+ +++ +PH+++SVP + + I+
Sbjct: 232 VVGFYIMIACGATVATVQVGATPMET-LKNIPQNIREVRPHFLLSVPALAKNFRKNIEGS 290
Query: 166 IFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAIL 225
I + +R ++ Y +G+ R Q W +L
Sbjct: 291 IRAKGRFTERLFNLALRTAYLYNK-----DGYG--RGQ----------GW------RVLL 327
Query: 226 WPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPV 284
WP L + ++++K++ A G S + V GG L + F+ AIG+ + GYGL+E++PV
Sbjct: 328 WPAVRLFDAVLFRKVREAFGGSLRFFVGGGALLDAELQRFFYAIGIPMFQGYGLSEATPV 387
Query: 285 IAARRPTC--NVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPS 342
I+ P + GS G + ++KIVD EV P G KG + +RG VM GY+KNP
Sbjct: 388 ISTNSPKYHWHRFGSSGKILIPLDLKIVDEAGREV-PRGEKGEIVIRGENVMAGYWKNPE 446
Query: 343 ATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELE 402
A+ + + DGWL+TGD+G+++ L + GR K ++ S GE P +E
Sbjct: 447 ASAETV-RDGWLHTGDMGYVSKDD----------FLYVLGRFKSLLIASDGEKYSPEGME 495
Query: 403 EAAL-RSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLL 461
EA + +S I QI++ GAI+VP++E A +R A E E +L
Sbjct: 496 EAIVDKSPYIDQIIIHNNQSPFTGAIVVPNRE----ALRRELDSRGIAGEKRAETAAEIL 551
Query: 462 YGELRKWTSKCSFQ--------IGPIHVVDEPFT 487
GE+ ++ + F + +VDEPFT
Sbjct: 552 GGEIDRYRAGGVFGGEFPERWLPAGLAIVDEPFT 585
>gi|409721734|ref|ZP_11269892.1| acyl-CoA synthetase [Halococcus hamelinensis 100A6]
gi|448722240|ref|ZP_21704778.1| acyl-CoA synthetase [Halococcus hamelinensis 100A6]
gi|445789951|gb|EMA40624.1| acyl-CoA synthetase [Halococcus hamelinensis 100A6]
Length = 643
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 124/386 (32%), Positives = 190/386 (49%), Gaps = 56/386 (14%)
Query: 61 IATYVYTSGTTGNPKGVMLTHKNLLHQIRSLY----------DIVPAENGDKFLSMLPPW 110
+A+ VYTSGTTG PKGV L+H+N + +Y D G LS LP
Sbjct: 208 LASLVYTSGTTGRPKGVKLSHRNFRANVDQVYRRFGPRPDKGDTPTIGPGSTSLSFLPLA 267
Query: 111 HVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFT 168
HV+ER G+F+ F+ G + Y + L++D P SVP VYE LY I++Q
Sbjct: 268 HVFERLAGHFMQFAAGSTVAYAESPDTLREDFSLVTPSSATSVPRVYEKLYDTIREQASG 327
Query: 169 SSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPL 228
S+ + R+ A T R Y G + P A L
Sbjct: 328 SAVSSRIFGWA--------TEVGRAYHG------SESPG---------------AGLRAK 358
Query: 229 HLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAA 287
H LA++LV+ +++ +G + +SGGGSL + + A+G+ + GYGLTE++PV+A
Sbjct: 359 HALADRLVFSQVREGVGGNIDFFISGGGSLSPDLARLFHAMGLPILEGYGLTETAPVVAV 418
Query: 288 RRPTCNVLGSVGHPINHTEIKIVDAET--NEVLPAGSKGIVKVRGSQVMQGYFKNPSATK 345
P +G++G+P++ E++ VD+ N+ G G + V+G V +GY+ P T
Sbjct: 419 NPPEAPEIGTIGYPVHDEEVR-VDSTVVPNDFDAEGEVGELLVKGPNVTEGYWNRPEETD 477
Query: 346 QALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAA 405
A D W TGD+ +R G L R+K +VLSTG+NV P +E+A
Sbjct: 478 DAFD-GKWFRTGDV----------VEQRPDGYLAFRERSKQLLVLSTGKNVAPRPIEDAF 526
Query: 406 LRSSLIRQIVVIGQDQRRPGAIIVPD 431
+ L+ Q +V+G ++ AI+VP+
Sbjct: 527 ASNPLVEQCMVVGDGEKFVSAIVVPN 552
>gi|121604076|ref|YP_981405.1| AMP-dependent synthetase and ligase [Polaromonas naphthalenivorans
CJ2]
gi|120593045|gb|ABM36484.1| AMP-dependent synthetase and ligase [Polaromonas naphthalenivorans
CJ2]
Length = 616
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 138/437 (31%), Positives = 219/437 (50%), Gaps = 47/437 (10%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 118
D+++ VYTSGTTG PKGVMLTH+N++ + ++ + V GD FLS LP H +ER G
Sbjct: 183 DELSAIVYTSGTTGKPKGVMLTHRNVVSNVLAILERVVPTAGDVFLSFLPLSHTFERTAG 242
Query: 119 YFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 176
Y++ + G + Y +V L +DL+ +P ++SVP +YE +++ + + + S+ R+
Sbjct: 243 YYLPLAVGSCVAYARSVALLAEDLKTVRPTVLVSVPRIYERVFARLHESLAGSAFRTRL- 301
Query: 177 ARALIRISFAYTAFKRI-YEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKL 235
+ A + + + FC + Q P L A WA ++ +LWP ++L
Sbjct: 302 ----------FNAAQAVGWRRFC--KVQGLP--LAAGEGSAWA-MLDPLLWPFL---DRL 343
Query: 236 VYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNV 294
V +K+++ G + VSGG L + + +GV + GYG+TE+SPV+AA N
Sbjct: 344 VARKLRAQFGGRVRVAVSGGAPLSHAVARCFLGLGVPLLQGYGMTETSPVVAANGVDDND 403
Query: 295 LGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWL 354
+VG + E++I D ++VRG VM+GY+K T + L DGWL
Sbjct: 404 PATVGRALPGIEVRIGDNRE-----------LQVRGPSVMKGYWKRAEDTARVLTPDGWL 452
Query: 355 NTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQI 414
+TGD I GR R + GR K+ IV STGE V P +LE A L Q+
Sbjct: 453 STGDQADI----QDGRIR-------IMGRIKEIIVTSTGEKVPPGDLELAIAVDPLFAQV 501
Query: 415 VVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSKCSF 474
+V+G+++ G + V +K E A L + A+ LS+ + T +
Sbjct: 502 MVVGENRPFIGCVAVVNKAEWQRLAASLGLDPIAAASLSQPAVRKAALARIAIQTRDFAR 561
Query: 475 QIGP--IHVVDEPFTVN 489
P I + EP+T+
Sbjct: 562 YAAPRAIFLTLEPWTIE 578
>gi|373456317|ref|ZP_09548084.1| AMP-dependent synthetase and ligase [Caldithrix abyssi DSM 13497]
gi|371717981|gb|EHO39752.1| AMP-dependent synthetase and ligase [Caldithrix abyssi DSM 13497]
Length = 592
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 138/450 (30%), Positives = 222/450 (49%), Gaps = 65/450 (14%)
Query: 24 VFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKN 83
V ++D+++ G ++F ++ + ETI +++ + VYTSGTTG PKGVML H+
Sbjct: 141 VATFDKLLQEGAVHAQSFPNAFEE----SMETIDPEELCSLVYTSGTTGEPKGVMLCHRG 196
Query: 84 LLHQIRSLYDIVPAEN------GDKFLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRN 135
+ +DIV +E D FLS LP H+YER G++ RG + Y +
Sbjct: 197 FV------FDIVQSEARLRLRADDVFLSFLPLSHLYERLAGHWCPIYRGATIHYARGIDT 250
Query: 136 LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYE 195
+ +D+ +P M+SVP +YE + + +Q++ SSA +AR + S
Sbjct: 251 VVEDIAVARPTIMVSVPRLYEKIANAMQEKAEQSSA----LARNIFYWSI---------- 296
Query: 196 GFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGG 254
G L ++K+ + V WL R + LAEKLV+ K+++ +G + ++GG
Sbjct: 297 GTGLEYHEKRRAGKVN--KWLERR---------YRLAEKLVFNKVKAKLGGRFRHPIAGG 345
Query: 255 GSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAET 314
L + +EAIG+ + GYG+TE+ +IA P GS G PI+ ++KI D
Sbjct: 346 APLSVETLKIFEAIGLPIIEGYGMTETHLIIALTPPGEVRYGSCGKPIDGIKVKIAD--- 402
Query: 315 NEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRC 374
G V V G +M+GY+ P TK+ +D++GWL+TGDIG++ +
Sbjct: 403 --------DGEVLVSGPLLMKGYYNKPDITKEVIDDEGWLHTGDIGYLDEEN-------- 446
Query: 375 GGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEE 434
L L R K+ IV S G+N+ P +E S I ++ ++G ++ A++VP E
Sbjct: 447 --YLFLTDRKKNIIVTSGGKNIAPAPIEHKLKTSKYIEEVCLVGDKRKFVSALVVPAYEI 504
Query: 435 VLMAAKRLSIVHADASELSKEKTISLLYGE 464
+ AK I L K + LY E
Sbjct: 505 LKEWAKSNKIDFDSMESLLKNDQVLKLYEE 534
>gi|345870330|ref|ZP_08822283.1| Long-chain-fatty-acid--CoA ligase [Thiorhodococcus drewsii AZ1]
gi|343921902|gb|EGV32611.1| Long-chain-fatty-acid--CoA ligase [Thiorhodococcus drewsii AZ1]
Length = 605
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 122/373 (32%), Positives = 188/373 (50%), Gaps = 48/373 (12%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 118
+ +AT VYTSGTTG PKGVML+H N+L + ++ D FLS LP H+ ER G
Sbjct: 186 NSLATIVYTSGTTGRPKGVMLSHHNMLANAHGVITLINVYREDVFLSFLPLSHMLERTGG 245
Query: 119 YFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 176
Y++ G + Y ++ L +D+Q +P +I+VP V+E +Y I Q+ T AA R +
Sbjct: 246 YYLPLMAGATVAYARSIAQLAEDMQTIRPTVIIAVPRVFERIYQRIADQLETKPAAVRWL 305
Query: 177 ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLV 236
+++ + +F+R R P+ L LWP L K+
Sbjct: 306 FNTAVKV--GWRSFQR-----TQGRAGWHPTLL---------------LWP--FLRHKVG 341
Query: 237 YKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLG 296
++ G +A VSGG +LP + + +G+ + GYGLTE+SPV++ N+
Sbjct: 342 APVLERLGGRIRAAVSGGAALPNSVARTFIGLGLPLIQGYGLTETSPVVSVNPLQANIPD 401
Query: 297 SVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNT 356
SVG PI +++I G+ ++++G VM GY+ N +AT + L +DGW +T
Sbjct: 402 SVGPPIRGIKVRI-----------GADDELQIKGHCVMMGYWNNHAATAKVLSQDGWFHT 450
Query: 357 GDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVV 416
GD ++R G + + GR KD +VLS GE V P +LE A L Q VV
Sbjct: 451 GD-----------QARIENGRVYITGRLKDILVLSNGEKVPPGDLELAISLDPLFDQTVV 499
Query: 417 IGQDQRRPGAIIV 429
+G+ A++V
Sbjct: 500 LGEGHSYLTALLV 512
>gi|89890831|ref|ZP_01202340.1| Long-chain-fatty-acid--CoA ligase (synthetase) [Flavobacteria
bacterium BBFL7]
gi|89516976|gb|EAS19634.1| Long-chain-fatty-acid--CoA ligase (synthetase) [Flavobacteria
bacterium BBFL7]
Length = 596
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 145/470 (30%), Positives = 223/470 (47%), Gaps = 62/470 (13%)
Query: 13 SVAPDIVEEIPVFSYDEIIDLGR-ESRKAFSDSND--ARKHYKYETIGSDDIATYVYTSG 69
S+ + + VFS+D+I + K S D A + I +D+AT +YTSG
Sbjct: 126 SIKDQVPSLLEVFSFDQINGCKNWDEVKQLGASQDHQAELEKRMAAITEEDLATLIYTSG 185
Query: 70 TTGNPKGVMLTHKNLLHQIRSLYDIVPAENG-DKFLSMLPPWHVYERACGYFIFSRGIEL 128
TTG PKGVML+HKN+ + +P + G K LS LP H+YER Y G +
Sbjct: 186 TTGRPKGVMLSHKNISSNAITSATRLPIDLGRSKALSFLPVCHIYERMLQYMYTYTGTGI 245
Query: 129 MYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAY 187
+ ++ + D+L+ QP M +VP + E +Y I
Sbjct: 246 YFAESIETISDNLKEIQPEVMSAVPRLLEKVYDKI------------------------- 280
Query: 188 TAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLL--AEKLVYKKIQSAIG 245
I +G LT +K+ + + W W L A+KL++ K Q A+G
Sbjct: 281 -----IAKGTDLTGIKKKLFFWAVELGLEWEPYGANGWWYEKKLGLAKKLIFSKWQEALG 335
Query: 246 IS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAAR--RPTCNVLGSVGHPI 302
+ KA SG +L + + A GV V GYGLTE+SPVI+ R +G+VG +
Sbjct: 336 GNLKAIASGSAALQPRLARVFNAAGVPVMEGYGLTETSPVISVNDLRDGGFKIGTVGKIL 395
Query: 303 NHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWI 362
+T+++I AE E++ + G Q M GY+K+P T +A+DE+G+ +TGDIG I
Sbjct: 396 PNTDVQI--AEDGEII---------INGPQRMMGYYKDPEKTAEAIDENGYFHTGDIGEI 444
Query: 363 APHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQR 422
G L + R K+ S G+ + P +E +S I QI+VIG+ ++
Sbjct: 445 DSE----------GFLKITDRKKEMFKTSGGKYIAPQLIENTMKQSRFIEQIMVIGEGEK 494
Query: 423 RPGAIIVPDKEEVLMAAKRLSIVHADASEL-SKEKTISLLYGELRKWTSK 471
P A I P+ E + A R IV+ D +L S+E+ I+ E+ + +K
Sbjct: 495 MPAAFIQPNFEFLADWANRKGIVYDDWKDLCSQERIINRYQKEIDFYNTK 544
>gi|384190057|ref|YP_005575805.1| long-chain-fatty-acid--CoA ligase [Bifidobacterium animalis subsp.
lactis BB-12]
gi|384192846|ref|YP_005578593.1| long-chain-fatty-acid--CoA ligase [Bifidobacterium animalis subsp.
lactis CNCM I-2494]
gi|289177549|gb|ADC84795.1| Long-chain-fatty-acid--CoA ligase [Bifidobacterium animalis subsp.
lactis BB-12]
gi|340365583|gb|AEK30874.1| Long-chain-fatty-acid--CoA ligase [Bifidobacterium animalis subsp.
lactis CNCM I-2494]
Length = 629
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 119/384 (30%), Positives = 184/384 (47%), Gaps = 52/384 (13%)
Query: 55 TIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPA--ENGDKFLSMLPPWHV 112
++ +DD+AT VYTSG+TG PKG L+H+N + R+ D VP E + L LP H
Sbjct: 201 SVNADDLATIVYTSGSTGTPKGAELSHRNFVSITRAAADCVPEVLEGNSRLLLFLPLAHC 260
Query: 113 YERACGYFIFSR--GIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSS 170
+ R YF F+ G+ + + L D+Q ++P ++++VP V+E +Y+ ++ T
Sbjct: 261 FARFIQYFAFTSDAGVIGYLPSTKTLPHDMQVFEPTFVLAVPRVFEKVYNAASRKAGTGW 320
Query: 171 AARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHL 230
R+ A++ + FA + G T QK H
Sbjct: 321 KG-RLFAKS---VEFAREWTEMEQAGIAPTPKQKAE----------------------HA 354
Query: 231 LAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARR 289
+ EKLVY I+SA G K GG L + F+ IG+ + GYGLTE++ A R
Sbjct: 355 MYEKLVYSTIRSAFGPRIKYLACGGAPLDRKLATFFNGIGLTMIQGYGLTETAAPFAFTR 414
Query: 290 PTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALD 349
NV+G+VG P+ + ++I G ++V+G V GY P T +
Sbjct: 415 VHDNVIGTVGQPVPGSSVRI-----------SPTGELEVKGQNVFLGYHNLPEKTTETFA 463
Query: 350 EDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSS 409
EDGWL TGD+ I G + L GRAKD I+ + G+NV P+ +E+
Sbjct: 464 EDGWLKTGDLASIDDE----------GHITLTGRAKDIIITAGGKNVSPIPMEQEISTCP 513
Query: 410 LIRQIVVIGQDQRRPGAIIVPDKE 433
++ VV+G ++ GA+I D+E
Sbjct: 514 IVEHAVVVGDNRPFVGAVITLDQE 537
>gi|298375259|ref|ZP_06985216.1| long-chain-fatty-acid-CoA ligase [Bacteroides sp. 3_1_19]
gi|298267759|gb|EFI09415.1| long-chain-fatty-acid-CoA ligase [Bacteroides sp. 3_1_19]
Length = 633
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 127/429 (29%), Positives = 217/429 (50%), Gaps = 54/429 (12%)
Query: 54 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 113
+++G+DD AT YTSGTT +PKGV+LTH+N + V ++ + L +LP H +
Sbjct: 173 QSLGNDDYATITYTSGTTADPKGVILTHRNYTANVEQALTCVDIDDTWRTLVILPLDHCF 232
Query: 114 ERACGYFIF-SRG-----IELMYTAVRNLKD---DLQRYQPHYMISVPLVYETLYSGIQK 164
G++IF S+G +++ T + LK+ +++ ++P+ ++SVP + + I++
Sbjct: 233 AHVVGFYIFMSKGASVATVQVGRTGMETLKNIPINIKEFKPYLILSVPALAKNFKKNIEQ 292
Query: 165 QIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAI 224
I + +RI + Y EG RI +
Sbjct: 293 GIRARGKNAVRLFNLALRIGYIYNGDSDEEEGKGF-------------------RI---L 330
Query: 225 LWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSP 283
L PL L +KL++ K++ G K + GG L + FY A+G+ + GYGL+E++P
Sbjct: 331 LKPLVRLFDKLLFAKVRENFGGELKFFIGGGALLDKDLQKFYYALGIPMYQGYGLSEATP 390
Query: 284 VIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSA 343
+I+ P +V GS G + ++KI D + N VLP G KG + +RG VM GY+KNP++
Sbjct: 391 IISTNGPRRHVFGSSGVLVRPLDLKICDMDGN-VLPPGEKGEIVIRGENVMAGYWKNPAS 449
Query: 344 TKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEE 403
T + E GWL TGD+G++ G+L + GR K ++ S GE P +EE
Sbjct: 450 TADTVKE-GWLYTGDMGYMR-----------DGLLYVLGRFKSLLIGSDGEKYSPEGIEE 497
Query: 404 AALR-SSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHAD---ASELSKEKTIS 459
A + SS I Q+++ A++VP+KE + R + H + S+ +E+ I
Sbjct: 498 ALVEHSSCIDQLILYNNQSPYTTALLVPNKERL-----RKHLAHQNLDLTSDQGREEAIR 552
Query: 460 LLYGELRKW 468
++ ++ ++
Sbjct: 553 IIQRQIDRF 561
>gi|334366829|ref|ZP_08515752.1| AMP-binding enzyme [Alistipes sp. HGB5]
gi|313157026|gb|EFR56458.1| AMP-binding enzyme [Alistipes sp. HGB5]
Length = 635
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 135/454 (29%), Positives = 217/454 (47%), Gaps = 62/454 (13%)
Query: 56 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYER 115
IG+DD AT YTSGTT +PKGV+LTH+N + + + + L +LP H +
Sbjct: 172 IGNDDYATITYTSGTTADPKGVVLTHRNYTANVEQSLSRIDIPSSFRTLIILPLDHCFAH 231
Query: 116 ACGYFIF----------SRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQ 165
G++I G M T ++N+ +++ +PH+++SVP + + I+
Sbjct: 232 VVGFYIMIACGATVATVQVGATPMET-LKNIPQNIREVRPHFLLSVPALAKNFRKNIEGS 290
Query: 166 IFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAIL 225
I + +R ++ Y +G+ R Q W +L
Sbjct: 291 IRAKGRFTERLFNLALRTAYLYNK-----DGYG--RGQ----------GW------RVLL 327
Query: 226 WPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPV 284
WP L + ++++K++ A G S + V GG L + F+ AIG+ + GYGL+E++PV
Sbjct: 328 WPAVRLFDAVLFRKVREAFGGSLRFFVGGGALLDAELQRFFYAIGIPMFQGYGLSEATPV 387
Query: 285 IAARRPTC--NVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPS 342
I+ P + GS G + ++KIVD EV P G KG + +RG VM GY+KNP
Sbjct: 388 ISTNSPKYHWHRFGSSGKILIPLDLKIVDEAGREV-PRGEKGEIVIRGENVMAGYWKNPE 446
Query: 343 ATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELE 402
A+ + + DGWL+TGD+G+++ L + GR K ++ S GE P +E
Sbjct: 447 ASAETV-RDGWLHTGDMGYVSKDD----------FLYVLGRFKSLLIASDGEKYSPEGME 495
Query: 403 EAAL-RSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLL 461
EA + +S I QI++ GAI+VP++E A +R A E E +L
Sbjct: 496 EAIVDKSPYIDQIIIHNNQSPFTGAIVVPNRE----ALRRELDSRGIAGEKRAETAAEIL 551
Query: 462 YGELRKWTSKCSFQ--------IGPIHVVDEPFT 487
GE+ ++ + F + +VDEPFT
Sbjct: 552 GGEIDRYRAGGVFGGEFPERWLPAGLAIVDEPFT 585
>gi|167856072|ref|ZP_02478815.1| DNA polymerase III subunit chi [Haemophilus parasuis 29755]
gi|219871804|ref|YP_002476179.1| long chain fatty acid CoA ligase [Haemophilus parasuis SH0165]
gi|167852821|gb|EDS24092.1| DNA polymerase III subunit chi [Haemophilus parasuis 29755]
gi|219692008|gb|ACL33231.1| long chain fatty acid CoA ligase [Haemophilus parasuis SH0165]
Length = 595
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 131/421 (31%), Positives = 209/421 (49%), Gaps = 53/421 (12%)
Query: 45 NDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKF- 103
N+A + + D+ T +YTSGTTG PKGVML + NL HQ+ + +D+ N D
Sbjct: 162 NEAEFEKRLNSKQLSDLFTLIYTSGTTGEPKGVMLDYANLAHQLNA-HDLALNVNEDDVS 220
Query: 104 LSMLPPWHVYERACGYFIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGI 162
LS LP H++ERA ++F RG Y N ++D L +P M +VP YE +Y+ +
Sbjct: 221 LSFLPLSHIFERAWVAYVFHRGATNCYLEDTNHVRDALTTLKPTVMCAVPRFYEKIYTAV 280
Query: 163 QKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIIC 222
++ + A RR + IR+ ++ Y+ +QPS W R+
Sbjct: 281 WDKVEKAPAHRRALFNWAIRVG------EKHYQT-------EQPSQ--------WLRLQY 319
Query: 223 AILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTES 281
A LA+KLV K+++ +G K GG L I F+ +IG+ +++GYG+TE+
Sbjct: 320 A-------LADKLVLTKLRALLGGRIKMMPCGGAKLEASIGSFFHSIGINIKLGYGMTET 372
Query: 282 SPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNP 341
+ ++ + S+G + + E+KI E NE+L VRG VM+GY+K P
Sbjct: 373 TATVSCWQDKGFNPNSIGTLMPNAEVKI--GEENEIL---------VRGGMVMRGYYKKP 421
Query: 342 SATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLEL 401
T +A EDG+L TGD+G + CG + + + R K+ + G+ + P +
Sbjct: 422 EETAKAFTEDGFLRTGDVGEMDS---------CGNLFITD-RLKELMKTLNGKYIAPQYI 471
Query: 402 EEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLL 461
E + I QI VI ++ A+IVP + + AK+L+I + D EL K I +
Sbjct: 472 EGKIGKDKFIEQIAVIADAKKYVSALIVPCFDSLEEYAKQLNIKYQDRIELIKHSDIIQM 531
Query: 462 Y 462
+
Sbjct: 532 F 532
>gi|448731479|ref|ZP_21713779.1| acyl-CoA synthetase [Halococcus saccharolyticus DSM 5350]
gi|445792232|gb|EMA42844.1| acyl-CoA synthetase [Halococcus saccharolyticus DSM 5350]
Length = 645
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 127/409 (31%), Positives = 196/409 (47%), Gaps = 56/409 (13%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLY----------DIVPAENGDKFLSMLP 108
DD+A+ +YTSGTTG PKGV LTH+N + +Y D + + +S LP
Sbjct: 206 DDLASLIYTSGTTGQPKGVQLTHRNFKANVDQVYRRFGPRPDKGDTPAIDTDSEAISFLP 265
Query: 109 PWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQI 166
HV+ER G+F+ F+ G + Y + L++D QP SVP VYE LY I+ Q
Sbjct: 266 LAHVFERLSGHFLMFAAGATVGYAESPDTLQEDFGLLQPTTGASVPRVYEKLYDAIRDQA 325
Query: 167 FTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILW 226
S+ R+ A + + Y A G R
Sbjct: 326 AESAVRERIFEWA-VDVGRTYQAADSPGIGLRAKRT------------------------ 360
Query: 227 PLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVI 285
+A++LV+ +++ A+G + + +SGGGSL + + +G+ + GYGLTE++PV+
Sbjct: 361 ----VADRLVFSQVREALGGNIEFLISGGGSLSPDLAELFHGMGIPILEGYGLTETAPVV 416
Query: 286 AARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVK---VRGSQVMQGYFKNPS 342
+ P +G++G PI+ E++I + L A S G V VRG V GY+ P
Sbjct: 417 SVNPPEEPEIGTIGPPIHDEEVRIDSTVVADDLAAKSGGEVGELLVRGPNVTDGYWNRPE 476
Query: 343 ATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELE 402
T+ A DGW TGD+ +R G + R+K +VLSTG+NV P +E
Sbjct: 477 ETEDAF-RDGWFRTGDV----------VEQRPDGYIAFRERSKQLLVLSTGKNVAPGPIE 525
Query: 403 EAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASE 451
+A + S + Q + IG ++ A+IVP++ V A I +D S+
Sbjct: 526 DAFAQHSAVEQCMAIGDGEKFVSALIVPNEAHVREWADDEGIDLSDDSQ 574
>gi|150007270|ref|YP_001302013.1| long-chain-fatty-acid-CoA ligase [Parabacteroides distasonis ATCC
8503]
gi|149935694|gb|ABR42391.1| long-chain-fatty-acid-CoA ligase, putative [Parabacteroides
distasonis ATCC 8503]
Length = 633
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 125/429 (29%), Positives = 215/429 (50%), Gaps = 54/429 (12%)
Query: 54 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 113
+++G+DD AT YTSGTT +PKGV+LTH+N + V ++ + L +LP H +
Sbjct: 173 QSLGNDDYATITYTSGTTADPKGVILTHRNYTANVEQALTCVDIDDTWRTLVILPLDHCF 232
Query: 114 ERACGYFIF-SRG-----IELMYTAVRNLKD---DLQRYQPHYMISVPLVYETLYSGIQK 164
G++IF S+G +++ T + LK+ +++ ++P+ ++SVP + + I++
Sbjct: 233 AHVVGFYIFMSKGASVATVQVGRTGMETLKNIPINIKEFKPYLILSVPALAKNFKKNIEQ 292
Query: 165 QIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAI 224
I + +RI + Y EG +
Sbjct: 293 GIRARGKNAVRLFNLALRIGYIYNGDSDEEEG----------------------KGFRVF 330
Query: 225 LWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSP 283
L PL L +KL++ K++ G K + GG L + FY A+G+ + GYGL+E++P
Sbjct: 331 LKPLIRLFDKLLFTKVRENFGGELKFFIGGGALLDKDLQKFYYALGIPMYQGYGLSEATP 390
Query: 284 VIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSA 343
+I+ P +V GS G + ++KI D + N VLP G KG + +RG VM GY+KNP++
Sbjct: 391 IISTNGPRRHVFGSSGVLVRPLDLKICDMDGN-VLPPGEKGEIVIRGENVMAGYWKNPAS 449
Query: 344 TKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEE 403
T + E GWL TGD+G++ G+L + GR K ++ S GE P +EE
Sbjct: 450 TADTVKE-GWLYTGDMGYMR-----------DGLLYVLGRFKSLLIGSDGEKYSPEGIEE 497
Query: 404 AALR-SSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHAD---ASELSKEKTIS 459
A + SS I Q+++ A++VP+KE + R + H + S+ +E+ I
Sbjct: 498 ALVEHSSCIDQLILYNNQSPYTTALLVPNKERL-----RKHLAHQNLDLTSDQGREEAIR 552
Query: 460 LLYGELRKW 468
++ ++ ++
Sbjct: 553 IIQRQIDRF 561
>gi|332288204|ref|YP_004419056.1| long chain fatty acid CoA ligase [Gallibacterium anatis UMN179]
gi|330431100|gb|AEC16159.1| long chain fatty acid CoA ligase [Gallibacterium anatis UMN179]
Length = 600
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 134/430 (31%), Positives = 209/430 (48%), Gaps = 56/430 (13%)
Query: 60 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENG-DKFLSMLPPWHVYERACG 118
D+ T +YTSGTTG PKGVML ++NL HQ+ + + +G D LS LP H++ERA
Sbjct: 182 DLFTLIYTSGTTGEPKGVMLDYQNLAHQLATHQQTLMKIDGSDVSLSFLPLSHIFERAWV 241
Query: 119 YFIFSRG-IELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 177
++ S+G + + +++ L +P M +VP YE +Y+ + ++ + R+ +
Sbjct: 242 AYVLSQGAVNVYLDDPHKVREALSVVKPTLMCAVPRFYEKIYATVFDKVKQAPWLRQQIF 301
Query: 178 RALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVY 237
+RI L QKQ L WL PLH LA+ LV+
Sbjct: 302 YNALRIG-----------KLALRYQQKQQP----LPFWLK---------PLHQLADSLVF 337
Query: 238 KKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLG 296
K+Q +G + GG L I +F+ IGV +++GYG+TE++ ++
Sbjct: 338 SKLQQVLGGRIRMMPCGGAKLEPEIGIFFHCIGVNIKLGYGMTETTATVSCWPDFGFESN 397
Query: 297 SVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNT 356
S+G + T +KI D NE+L V+G VM+GYFKNP T + EDG+L T
Sbjct: 398 SIGQIMPGTTVKIGDE--NEIL---------VKGGGVMKGYFKNPEETAKCFTEDGFLKT 446
Query: 357 GDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVV 416
GD G++ G L + R KD + STG+ + P +E L+ LI QI V
Sbjct: 447 GDAGYVDAE----------GNLFMTDRIKDLMKTSTGKYIAPQAVEGKLLQDKLIEQIAV 496
Query: 417 IGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLLYGELRKW 468
I ++ A++VP + + AK+L+I + + +L K EK I+ L EL+ +
Sbjct: 497 IADARKYVSALVVPCFDTLEEYAKKLNIQYQNRLDLIKNAAIVEMFEKRINELQKELQGF 556
Query: 469 TSKCSFQIGP 478
F + P
Sbjct: 557 EKIKKFTLLP 566
>gi|448666528|ref|ZP_21685173.1| long-chain fatty-acid-CoA ligase [Haloarcula amylolytica JCM 13557]
gi|445771659|gb|EMA22715.1| long-chain fatty-acid-CoA ligase [Haloarcula amylolytica JCM 13557]
Length = 660
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 137/416 (32%), Positives = 206/416 (49%), Gaps = 65/416 (15%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNL---LHQIRSLYDIVPAENGD--------KFLSML 107
DD+A+ +YTSGTTG PKGV LTH+N ++Q R P ++ D + ++ L
Sbjct: 210 DDLASLIYTSGTTGQPKGVQLTHRNFRANVNQARRRIGPRPDKSSDLPTVTAETRSIAFL 269
Query: 108 PPWHVYERACG-YFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQ 165
P HV+ER G +F+++ G + Y + L DDLQ +P +SVP VYE ++ ++ Q
Sbjct: 270 PLAHVFERLAGHFFMYASGAAVSYAESPDTLADDLQTVEPMTGLSVPRVYERIFDNMRTQ 329
Query: 166 IFTSSAARRVVARAL-IRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAI 224
S +R+ ++ + +A T + P I
Sbjct: 330 ASESPLKKRIFDWSMDVARDYART-------------DDPGP-----------------I 359
Query: 225 LWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSP 283
L H LA++LVY ++ +G + + VSGGGSL + + +G+ + GYGLTE+SP
Sbjct: 360 LTAKHSLADRLVYSTVKERLGGNIEFMVSGGGSLSKTLCETFLGMGLTILEGYGLTETSP 419
Query: 284 VIAARRPTCNVLGSVGHPIN----HTEIKIVDA-ETNEVLPAGSKGIVKVRGSQVMQGYF 338
V+ P G++G P+ H + +VDA E ++V G G + V G V QGY+
Sbjct: 420 VLTVNPPEDVRPGTLGAPLTEVDVHIDTGVVDASEFDDV--TGDVGELLVDGPNVTQGYW 477
Query: 339 KNPSATKQALDE-DG--WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGEN 395
P AT +A E DG W TGDI R L+ R K+ +VLSTG+N
Sbjct: 478 NAPDATTRAFTEIDGTQWFRTGDI----------VERTDDDFLIYHDRLKELLVLSTGKN 527
Query: 396 VEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASE 451
V P +E+ S + Q++V+G DQ+ GAIIVP+ EE+ A R + D E
Sbjct: 528 VAPQPIEDQFATSDRVDQVMVVGDDQKFVGAIIVPNFEELRRWADREGVDLPDDHE 583
>gi|90411921|ref|ZP_01219929.1| putative long-chain-fatty-acid-CoA ligase [Photobacterium profundum
3TCK]
gi|90327179|gb|EAS43551.1| putative long-chain-fatty-acid-CoA ligase [Photobacterium profundum
3TCK]
Length = 604
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 130/415 (31%), Positives = 197/415 (47%), Gaps = 47/415 (11%)
Query: 46 DARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLS 105
+A + DD+ T +YTSGTTG PKGVML + N+ Q+ + + GD L
Sbjct: 165 EAELQQRLNDTAMDDLLTLIYTSGTTGTPKGVMLDYANIAAQLVGHDQNLSLDEGDTSLC 224
Query: 106 MLPPWHVYERACGYFIFSRG-IELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQK 164
LP HV+ERA +++ RG I T LK+ L +P+ M +VP VYE +YS +
Sbjct: 225 FLPLSHVFERAWTFYVLHRGAINHYLTDTNQLKEALAEVKPNVMAAVPRVYEKIYSTVHD 284
Query: 165 QIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAI 224
++ + R++V ++A R+ C + +QPS L+ +
Sbjct: 285 KVSRAPFHRKLV------FTWAVNMGARM--AVC-HQEHRQPSKLLTMS----------- 324
Query: 225 LWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSP 283
H LA K+V K++ +G + K GG L I F+ AIG+ V++GYG+TE++
Sbjct: 325 ----HNLANKVVLSKLRDILGGNIKFMPCGGAKLDESIGRFFHAIGINVKLGYGMTETTA 380
Query: 284 VIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSA 343
++ C S+G + EIKI E NE+L VRG VM+GY+ P
Sbjct: 381 TVSCWDDQCFNPDSIGMAMPGAEIKI--GENNEIL---------VRGPMVMRGYYNMPEE 429
Query: 344 TKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEE 403
T + EDG+L TGD G G L + R K+ + S G+ + P +E
Sbjct: 430 TAKNFTEDGFLKTGDAGHFDEQ----------GNLFITDRIKELMKTSGGKYIAPQVIEG 479
Query: 404 AALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTI 458
A + I QI VI ++ A+IVP + + A+ L+I + D EL K I
Sbjct: 480 AIGKDHFIEQIAVIADTRKFVSALIVPCFDTLEEHARELNIKYHDRLELVKNSQI 534
>gi|433656674|ref|YP_007274053.1| Long-chain-fatty-acid--CoA ligase [Vibrio parahaemolyticus BB22OP]
gi|432507362|gb|AGB08879.1| Long-chain-fatty-acid--CoA ligase [Vibrio parahaemolyticus BB22OP]
Length = 602
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 133/445 (29%), Positives = 209/445 (46%), Gaps = 55/445 (12%)
Query: 44 SNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKF 103
S+ A + E DD+ T +YTSGTTG PKGVML + N+ Q+ + D
Sbjct: 163 SHQAELDERLEQAKVDDLLTLIYTSGTTGQPKGVMLDYGNIAAQLEGHDQRLSLSQDDVS 222
Query: 104 LSMLPPWHVYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLYSGI 162
L LP HV+ERA +++ +G Y ++D L +P M +VP YE ++S I
Sbjct: 223 LCFLPLSHVFERAWTFYVLYKGATNCYLQDTMQVRDALSEVRPTVMCAVPRFYEKIFSAI 282
Query: 163 QKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIIC 222
+++ + R+++ F + C + +++PS +
Sbjct: 283 HEKVSRAPIHRKIM--------FTWAVNMGAKMALC-HQEKRKPSMM------------- 320
Query: 223 AILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTES 281
L H LA+KLV K+++ +G + GG L I F+ AIG+ V++GYG+TE+
Sbjct: 321 --LRKAHALADKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTET 378
Query: 282 SPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNP 341
+ I+ C S+G + ++KI E NE+L VRG VM+GY+K P
Sbjct: 379 TATISCWDDKCFDPDSIGMSMPGAQVKI--GENNEIL---------VRGPMVMRGYYKMP 427
Query: 342 SATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLEL 401
T++ DE G+L TGD G I + G L + R K+ + S G+ + P +
Sbjct: 428 EETEKTFDEHGFLKTGDAGHIDEN----------GNLFITDRIKELMKTSGGKYIAPQMI 477
Query: 402 EEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK------- 454
E A + I QI VI ++ A+IVP + + AK L+I + D EL K
Sbjct: 478 EGAIGKDHFIEQIAVIADTRKFVSALIVPCFDSLEEYAKELNIAYHDRVELIKHHQVVEM 537
Query: 455 -EKTISLLYGELRKWTSKCSFQIGP 478
EK ++ L EL K+ F++ P
Sbjct: 538 LEKRVNELQKELAKFEQVKKFKLLP 562
>gi|183602191|ref|ZP_02963559.1| probable long-chain-fatty acid CoA ligase [Bifidobacterium animalis
subsp. lactis HN019]
gi|241191423|ref|YP_002968817.1| long-chain-fatty acid CoA ligase [Bifidobacterium animalis subsp.
lactis Bl-04]
gi|241196829|ref|YP_002970384.1| long-chain-fatty acid CoA ligase [Bifidobacterium animalis subsp.
lactis DSM 10140]
gi|384194421|ref|YP_005580167.1| long-chain-fatty acid CoA ligase [Bifidobacterium animalis subsp.
lactis BLC1]
gi|384195985|ref|YP_005581730.1| long-chain-fatty acid CoA ligase [Bifidobacterium animalis subsp.
lactis V9]
gi|387821287|ref|YP_006301330.1| long-chain-fatty-acid--CoA ligase [Bifidobacterium animalis subsp.
lactis B420]
gi|387822973|ref|YP_006302922.1| long-chain-fatty-acid--CoA ligase [Bifidobacterium animalis subsp.
lactis Bi-07]
gi|423679955|ref|ZP_17654831.1| long-chain-fatty acid CoA ligase [Bifidobacterium animalis subsp.
lactis BS 01]
gi|183218684|gb|EDT89327.1| probable long-chain-fatty acid CoA ligase [Bifidobacterium animalis
subsp. lactis HN019]
gi|240249815|gb|ACS46755.1| long-chain-fatty acid CoA ligase [Bifidobacterium animalis subsp.
lactis Bl-04]
gi|240251383|gb|ACS48322.1| long-chain-fatty acid CoA ligase [Bifidobacterium animalis subsp.
lactis DSM 10140]
gi|295794416|gb|ADG33951.1| long-chain-fatty acid CoA ligase [Bifidobacterium animalis subsp.
lactis V9]
gi|345283280|gb|AEN77134.1| long-chain-fatty acid CoA ligase [Bifidobacterium animalis subsp.
lactis BLC1]
gi|366040954|gb|EHN17467.1| long-chain-fatty acid CoA ligase [Bifidobacterium animalis subsp.
lactis BS 01]
gi|386653988|gb|AFJ17118.1| Long-chain-fatty-acid--CoA ligase [Bifidobacterium animalis subsp.
lactis B420]
gi|386655581|gb|AFJ18710.1| Long-chain-fatty-acid--CoA ligase [Bifidobacterium animalis subsp.
lactis Bi-07]
Length = 606
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 119/384 (30%), Positives = 184/384 (47%), Gaps = 52/384 (13%)
Query: 55 TIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPA--ENGDKFLSMLPPWHV 112
++ +DD+AT VYTSG+TG PKG L+H+N + R+ D VP E + L LP H
Sbjct: 178 SVNADDLATIVYTSGSTGTPKGAELSHRNFVSITRAAADCVPEVLEGNSRLLLFLPLAHC 237
Query: 113 YERACGYFIFSR--GIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSS 170
+ R YF F+ G+ + + L D+Q ++P ++++VP V+E +Y+ ++ T
Sbjct: 238 FARFIQYFAFTSDAGVIGYLPSTKTLPHDMQVFEPTFVLAVPRVFEKVYNAASRKAGTGW 297
Query: 171 AARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHL 230
R+ A++ + FA + G T QK H
Sbjct: 298 KG-RLFAKS---VEFAREWTEMEQAGIAPTPKQKAE----------------------HA 331
Query: 231 LAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARR 289
+ EKLVY I+SA G K GG L + F+ IG+ + GYGLTE++ A R
Sbjct: 332 MYEKLVYSTIRSAFGPRIKYLACGGAPLDRKLATFFNGIGLTMIQGYGLTETAAPFAFTR 391
Query: 290 PTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALD 349
NV+G+VG P+ + ++I G ++V+G V GY P T +
Sbjct: 392 VHDNVIGTVGQPVPGSSVRI-----------SPTGELEVKGQNVFLGYHNLPEKTTETFA 440
Query: 350 EDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSS 409
EDGWL TGD+ I G + L GRAKD I+ + G+NV P+ +E+
Sbjct: 441 EDGWLKTGDLASIDDE----------GHITLTGRAKDIIITAGGKNVSPIPMEQEISTCP 490
Query: 410 LIRQIVVIGQDQRRPGAIIVPDKE 433
++ VV+G ++ GA+I D+E
Sbjct: 491 IVEHAVVVGDNRPFVGAVITLDQE 514
>gi|448388126|ref|ZP_21565066.1| AMP-dependent synthetase and ligase [Haloterrigena salina JCM
13891]
gi|445670777|gb|ELZ23374.1| AMP-dependent synthetase and ligase [Haloterrigena salina JCM
13891]
Length = 652
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 140/432 (32%), Positives = 214/432 (49%), Gaps = 72/432 (16%)
Query: 24 VFSYDEIIDLGRES--RKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTH 81
V++ DE+ D G E+ +A+ + DA + DD+A+ +YTSGTTG PKGV LTH
Sbjct: 177 VYTLDEVYDRGTETFDLEAYEERLDA--------VELDDLASLIYTSGTTGQPKGVRLTH 228
Query: 82 KNL---LHQIRSLY-------DIVPAENGDKF-LSMLPPWHVYERACGYFI-FSRGIELM 129
N ++ IR + D VP + + +S LP HV+ER G+F+ F+ G +
Sbjct: 229 WNFRSNVNAIRKRFARRPDRDDDVPTLDEESLAMSYLPLAHVFERTAGHFVLFASGSCIA 288
Query: 130 YTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYT 188
Y + L++D P SVP VYE +Y GI++Q + S A++ + + AY
Sbjct: 289 YAENPDTLQEDFSIVGPTTATSVPRVYEKIYDGIREQA-SESGAKQTIFEWATDVGVAY- 346
Query: 189 AFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS- 247
+ P L L +A+KLV+ ++ A+G +
Sbjct: 347 ------------QQADSPGPL---------------LRAKQAIADKLVFSTVREALGGNI 379
Query: 248 KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEI 307
+SGGGSL + Y A+G+ + GYGLTE+SPV+A P +G++G +++ ++
Sbjct: 380 DLLISGGGSLSPELCRLYHAMGLPIFEGYGLTETSPVVATNPPDAAKIGTIGPAVSNVDL 439
Query: 308 KI----VDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDE--DG--WLNTGDI 359
+I D E + P G G + V G V +GY+ P AT+ A E DG W TGDI
Sbjct: 440 RIDETVADQEAFDDDP-GKVGELLVAGPSVTEGYWNRPGATQGAFTEGDDGTQWFRTGDI 498
Query: 360 GWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQ 419
RR G L R K IVLSTG+NV P +E+A S ++ Q +V+G
Sbjct: 499 ----------VHRRPDGYLEFRDRLKQIIVLSTGKNVAPGPIEDAFAASEIVEQAMVVGD 548
Query: 420 DQRRPGAIIVPD 431
++ GA++VP+
Sbjct: 549 GEKFIGALLVPN 560
>gi|255014105|ref|ZP_05286231.1| long-chain-fatty-acid-CoA ligase, putative [Bacteroides sp. 2_1_7]
gi|410101665|ref|ZP_11296593.1| hypothetical protein HMPREF0999_00365 [Parabacteroides sp. D25]
gi|409239463|gb|EKN32247.1| hypothetical protein HMPREF0999_00365 [Parabacteroides sp. D25]
Length = 633
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 124/429 (28%), Positives = 215/429 (50%), Gaps = 54/429 (12%)
Query: 54 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 113
+++G+DD AT YTSGTT +PKGV+LTH+N + V ++ + L +LP H +
Sbjct: 173 QSLGNDDYATITYTSGTTADPKGVILTHRNYTANVEQALTCVDIDDTWRTLVILPLDHCF 232
Query: 114 ERACGYFIF-SRG-----IELMYTAVRNLKD---DLQRYQPHYMISVPLVYETLYSGIQK 164
G++IF S+G +++ T + LK+ +++ ++P+ ++SVP + + I++
Sbjct: 233 AHVVGFYIFMSKGASVATVQVGRTGMETLKNIPINIKEFKPYLILSVPALAKNFKKNIEQ 292
Query: 165 QIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAI 224
I + +RI + Y EG + +
Sbjct: 293 GIRARGKNAARLFNLALRIGYIYNGDSDEEEG----------------------KGFRVL 330
Query: 225 LWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSP 283
L PL L +KL++ K++ G K + GG L + FY A+G+ + GYGL+E++P
Sbjct: 331 LKPLVRLFDKLLFAKVRENFGGELKFFIGGGALLDKDLQKFYYALGIPMYQGYGLSEATP 390
Query: 284 VIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSA 343
+I+ P + GS G + ++KI D + N VLP G KG + +RG VM GY+KNP++
Sbjct: 391 IISTNGPRRHTFGSSGVLVRPLDLKICDMDGN-VLPPGEKGEIVIRGENVMAGYWKNPAS 449
Query: 344 TKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEE 403
T + E GWL TGD+G++ G+L + GR K ++ S GE P +EE
Sbjct: 450 TADTVKE-GWLYTGDMGYMRD-----------GLLYVLGRFKSLLIGSDGEKYSPEGIEE 497
Query: 404 AALR-SSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHAD---ASELSKEKTIS 459
A + SS I Q+++ A++VP+KE + R + H + S+ +E+ I
Sbjct: 498 ALVEHSSCIDQLILYNNQSPYTTALLVPNKERL-----RKHLAHQNLDLTSDQGREEAIR 552
Query: 460 LLYGELRKW 468
++ ++ ++
Sbjct: 553 IIQRQIDRF 561
>gi|238060302|ref|ZP_04605011.1| AMP-dependent synthetase and ligase [Micromonospora sp. ATCC 39149]
gi|237882113|gb|EEP70941.1| AMP-dependent synthetase and ligase [Micromonospora sp. ATCC 39149]
Length = 605
Score = 178 bits (452), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 124/418 (29%), Positives = 198/418 (47%), Gaps = 59/418 (14%)
Query: 21 EIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLT 80
+I + + DE++ G + + A + + +DDIAT +YTSGTTG PKG +LT
Sbjct: 153 QIELGAVDELVAAG-------ASVDPAEIDRRRSAVQADDIATIIYTSGTTGRPKGCVLT 205
Query: 81 HKNLLHQIRSLYDIVPA---ENGDKFLSMLPPWHVYERACGYFIF-SRGIELMYTAVRNL 136
H+N+ I + +P G L LP H + R + +R T +NL
Sbjct: 206 HRNMYADIANAVPALPNLFLRPGASTLLFLPLAHSFARLIQIGVVQARATMAHCTDTKNL 265
Query: 137 KDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEG 196
+LQ ++P +++SVP V+E +Y+G +++ R + ++++ K G
Sbjct: 266 VGELQAFRPTFVLSVPRVFEKVYNGARQKAEADGKGRIFDRAEQVAVAYSEALEKPGGPG 325
Query: 197 FCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIG-ISKAGVSGGG 255
L R Q H + ++LVY+K+++A+G + +SGG
Sbjct: 326 LAL-RAQ-------------------------HAVFDRLVYRKLRAALGGRCRDAISGGA 359
Query: 256 SLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETN 315
L + F+ IGV + GYGLTE+SP + P +G+VG P+ I+I D
Sbjct: 360 PLGARLGHFFRGIGVTICEGYGLTETSPAASVNLPDATKIGTVGRPLPGVTIRIDD---- 415
Query: 316 EVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCG 375
G + + G+ + QGY++N +AT +AL DGW TGD+G +
Sbjct: 416 -------DGEILISGNLIFQGYWRNETATAEALSPDGWFRTGDLGQL----------DTD 458
Query: 376 GVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 433
G L + GR K+ IV + G+NV P LE+ LI Q VVIG Q A++ D+E
Sbjct: 459 GFLSITGRKKEIIVTAGGKNVAPAVLEDQVRAHPLISQCVVIGDRQPFIAALVTIDEE 516
>gi|153839176|ref|ZP_01991843.1| AMP-binding family protein [Vibrio parahaemolyticus AQ3810]
gi|149747314|gb|EDM58294.1| AMP-binding family protein [Vibrio parahaemolyticus AQ3810]
Length = 602
Score = 178 bits (452), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 136/463 (29%), Positives = 216/463 (46%), Gaps = 62/463 (13%)
Query: 26 SYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLL 85
S+ + + G +R+A D + E DD+ T +YTSGTTG PKGVML + N+
Sbjct: 152 SWKDFVAKGDTNRQAELDE-------RLEQAKVDDLLTLIYTSGTTGQPKGVMLDYGNIA 204
Query: 86 HQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQ 144
Q+ + D L LP HV+ERA +++ +G Y ++D L +
Sbjct: 205 AQLEGHDQRLSLSQDDVSLCFLPLSHVFERAWTFYVLYKGATNCYLQDTMQVRDALSEVR 264
Query: 145 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQK 204
P M +VP YE ++S I +++ + R+++ F + C + ++
Sbjct: 265 PTVMCAVPRFYEKIFSAIHEKVSRAPIHRKIM--------FTWAVNMGAKMALC-HQEKR 315
Query: 205 QPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDL 263
+PS + L H LA+KLV K+++ +G + GG L I
Sbjct: 316 KPSMM---------------LRKAHALADKLVLSKLRALLGGRINFMPCGGAKLDETIGR 360
Query: 264 FYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSK 323
F+ AIG+ V++GYG+TE++ I+ C S+G + ++KI E NE+L
Sbjct: 361 FFHAIGINVKLGYGMTETTATISCWDDKCFDPDSIGMSMPGAQVKI--GENNEIL----- 413
Query: 324 GIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGR 383
VRG VM+GY+K P T++ DE G+L TGD G I + G L + R
Sbjct: 414 ----VRGPMVMRGYYKMPEETEKTFDEHGFLKTGDAGHIDEN----------GNLFITDR 459
Query: 384 AKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLS 443
K+ + S G+ + P +E A + I QI VI ++ A+IVP + + AK L+
Sbjct: 460 IKELMKTSGGKYIAPQMIEGAIGKDHFIEQIAVIADTRKFVSALIVPCFDSLEEYAKELN 519
Query: 444 IVHADASELSK--------EKTISLLYGELRKWTSKCSFQIGP 478
I + D EL K EK ++ L EL K+ F++ P
Sbjct: 520 IAYHDRVELIKHHQVVEMLEKRVNELQKELAKFEQVKKFKLLP 562
>gi|28897125|ref|NP_796730.1| long-chain-fatty-acid-CoA ligase [Vibrio parahaemolyticus RIMD
2210633]
gi|260361698|ref|ZP_05774725.1| putative AMP-binding enzyme [Vibrio parahaemolyticus K5030]
gi|260878037|ref|ZP_05890392.1| long-chain-fatty-acid--CoA ligase family protein [Vibrio
parahaemolyticus AN-5034]
gi|260896932|ref|ZP_05905428.1| long-chain-fatty-acid--CoA ligase family protein [Vibrio
parahaemolyticus Peru-466]
gi|260903404|ref|ZP_05911799.1| putative AMP-binding enzyme [Vibrio parahaemolyticus AQ4037]
gi|28805334|dbj|BAC58614.1| putative long-chain-fatty-acid-CoA ligase [Vibrio parahaemolyticus
RIMD 2210633]
gi|308088769|gb|EFO38464.1| long-chain-fatty-acid--CoA ligase family protein [Vibrio
parahaemolyticus Peru-466]
gi|308089896|gb|EFO39591.1| long-chain-fatty-acid--CoA ligase family protein [Vibrio
parahaemolyticus AN-5034]
gi|308109048|gb|EFO46588.1| putative AMP-binding enzyme [Vibrio parahaemolyticus AQ4037]
gi|308115498|gb|EFO53038.1| putative AMP-binding enzyme [Vibrio parahaemolyticus K5030]
Length = 602
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 133/445 (29%), Positives = 209/445 (46%), Gaps = 55/445 (12%)
Query: 44 SNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKF 103
S+ A + E DD+ T +YTSGTTG PKGVML + N+ Q+ + D
Sbjct: 163 SHQAELDERLEQAKVDDLLTLIYTSGTTGQPKGVMLDYGNIAAQLEGHDQRLSLSQDDVS 222
Query: 104 LSMLPPWHVYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLYSGI 162
L LP HV+ERA +++ +G Y ++D L +P M +VP YE ++S I
Sbjct: 223 LCFLPLSHVFERAWTFYVLYKGATNCYLQDTMQVRDALSEVRPTVMCAVPRFYEKIFSAI 282
Query: 163 QKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIIC 222
+++ + R+++ F + C + +++PS +
Sbjct: 283 HEKVSRAPIHRKIM--------FTWAVNMGAKMALC-HQEKRKPSMM------------- 320
Query: 223 AILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTES 281
L H LA+KLV K+++ +G + GG L I F+ AIG+ V++GYG+TE+
Sbjct: 321 --LRKAHALADKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTET 378
Query: 282 SPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNP 341
+ I+ C S+G + ++KI E NE+L VRG VM+GY+K P
Sbjct: 379 TATISCWDDKCFDPDSIGMSMPGAQVKI--GENNEIL---------VRGPMVMRGYYKMP 427
Query: 342 SATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLEL 401
T++ DE G+L TGD G I + G L + R K+ + S G+ + P +
Sbjct: 428 EETEKTFDEHGFLKTGDAGHIDEN----------GNLFITDRIKELMKTSGGKYIAPQMI 477
Query: 402 EEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK------- 454
E A + I QI VI ++ A+IVP + + AK L+I + D EL K
Sbjct: 478 EGAIGKDHFIEQIAVIADTRKFVSALIVPCFDSLEEYAKELNIAYHDRVELIKHHQVVEM 537
Query: 455 -EKTISLLYGELRKWTSKCSFQIGP 478
EK ++ L EL K+ F++ P
Sbjct: 538 LEKRVNELQKELAKFEQVKKFKLLP 562
>gi|159039049|ref|YP_001538302.1| AMP-dependent synthetase and ligase [Salinispora arenicola CNS-205]
gi|157917884|gb|ABV99311.1| AMP-dependent synthetase and ligase [Salinispora arenicola CNS-205]
Length = 599
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 133/437 (30%), Positives = 212/437 (48%), Gaps = 55/437 (12%)
Query: 4 IILLWGKKSSVAPDIVEEIPVFSYDEIIDLGR-ESRKAFSDSNDARK-HYKYETIGSDDI 61
I++ +++ D+ + +P ++ IDLG + A +S D + + + +DDI
Sbjct: 122 ILVETSAHATLVADVRDRVPDLAHVWQIDLGAMDELIATGESVDPTEIERRRAAVRADDI 181
Query: 62 ATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPA--ENGDKFLSMLPPWHVYERACGY 119
AT VYTSGTTG PKG MLTH+++ + + ++P G L LP HV+ R
Sbjct: 182 ATIVYTSGTTGRPKGCMLTHRSMYADVANAVPVLPNLFGPGASTLLFLPLAHVFARLIQV 241
Query: 120 FIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 178
+ + + A ++L LQ +P +++SVP V+E +Y+ KQ + R+ AR
Sbjct: 242 GVVQARATMAHCADTKDLIARLQAVRPTFVLSVPRVFEKVYNS-AKQKAEADGKGRIFAR 300
Query: 179 A-LIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVY 237
A + I+++ R G L R Q H L ++LVY
Sbjct: 301 AEAVAIAYSEALETRTGPGLAL-RVQ-------------------------HALFDRLVY 334
Query: 238 KKIQSAI-GISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLG 296
+K+++A+ G + +SGG L + F+ +GV + GYGLTE+SP A RP +G
Sbjct: 335 RKLRAALGGRCRDAISGGAPLGARLGHFFRGVGVTIYEGYGLTETSPAACANRPGAIRIG 394
Query: 297 SVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNT 356
SVG P+ I+I D +E+L + G V GY++N +A+ + L DGW T
Sbjct: 395 SVGRPLPGVNIRIDD--DDEIL---------IAGELVFTGYWRNEAASAEVLTPDGWFRT 443
Query: 357 GDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVV 416
GD+G + G L + GR K+ IV + G+NV P LE+ L+ Q VV
Sbjct: 444 GDLGQL----------DSDGYLNITGRKKEIIVTAGGKNVAPAVLEDQVRAHPLVSQCVV 493
Query: 417 IGQDQRRPGAIIVPDKE 433
+G Q A++ D+E
Sbjct: 494 VGDRQPFVAALVTVDEE 510
>gi|423332199|ref|ZP_17309983.1| hypothetical protein HMPREF1075_01996 [Parabacteroides distasonis
CL03T12C09]
gi|409229322|gb|EKN22199.1| hypothetical protein HMPREF1075_01996 [Parabacteroides distasonis
CL03T12C09]
Length = 633
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 127/429 (29%), Positives = 216/429 (50%), Gaps = 54/429 (12%)
Query: 54 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 113
+++G+DD AT YTSGTT +PKGV+LTH+N + V ++ + L +LP H +
Sbjct: 173 QSLGNDDYATITYTSGTTADPKGVILTHRNYTANVEQALTCVDIDDTWRTLVILPLDHCF 232
Query: 114 ERACGYFIF-SRG-----IELMYTAVRNLKD---DLQRYQPHYMISVPLVYETLYSGIQK 164
G++IF S+G +++ T + LK+ +++ ++P ++SVP + + I++
Sbjct: 233 AHVVGFYIFMSKGASVATVQVGRTGMETLKNIPVNIKEFKPDLILSVPALAKNFKKNIEQ 292
Query: 165 QIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAI 224
I + +RI + Y EG RI +
Sbjct: 293 GIRARGKNAVRLFNLALRIGYIYNGDSDEEEGKGF-------------------RI---L 330
Query: 225 LWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSP 283
L PL L +KL++ K++ G K + GG L + FY A+G+ + GYGL+E++P
Sbjct: 331 LKPLVRLFDKLLFAKVRENFGGELKFFIGGGALLDKDLQKFYYALGIPMYQGYGLSEATP 390
Query: 284 VIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSA 343
+I+ P +V GS G + ++KI D + N VLP G KG + +RG VM GY+KNP++
Sbjct: 391 IISTNGPRRHVFGSSGVLVRPLDLKICDMDGN-VLPPGEKGEIVIRGENVMAGYWKNPAS 449
Query: 344 TKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEE 403
T + E GWL TGD+G++ G+L + GR K ++ S GE P +EE
Sbjct: 450 TADTVKE-GWLYTGDMGYMR-----------DGLLYVLGRFKSLLIGSDGEKYSPEGIEE 497
Query: 404 AALR-SSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHAD---ASELSKEKTIS 459
A + SS I Q+++ A++VP+KE + R + H + S+ +E+ I
Sbjct: 498 ALVEHSSCIDQLILYNNQSPYTTALLVPNKERL-----RKHLAHQNLDLTSDQGREEAIR 552
Query: 460 LLYGELRKW 468
++ ++ ++
Sbjct: 553 IIQRQIDRF 561
>gi|313147826|ref|ZP_07810019.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
gi|424665955|ref|ZP_18102991.1| hypothetical protein HMPREF1205_01830 [Bacteroides fragilis HMW
616]
gi|313136593|gb|EFR53953.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
gi|404574208|gb|EKA78959.1| hypothetical protein HMPREF1205_01830 [Bacteroides fragilis HMW
616]
Length = 601
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 133/440 (30%), Positives = 214/440 (48%), Gaps = 54/440 (12%)
Query: 57 GSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSM--LPPWHVYE 114
G+DD+A +YTSGTTG PKGVML H L R ++DI + DK +SM LP HV+E
Sbjct: 178 GADDLANILYTSGTTGEPKGVMLHHSCYLEAFR-IHDIRLVDMTDKDVSMNFLPLTHVFE 236
Query: 115 RACGYFIFSRGIEL-MYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 173
+A Y +G+++ + +++ ++ +P M SVP +E +Y+G+Q++I ++ +
Sbjct: 237 KAWTYLCVHKGVQVCINLRPADIQTTIKEIRPTLMCSVPRFWEKVYAGVQEKIAETTGIK 296
Query: 174 RVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAE 233
+++ I++ RI+ L R K P ++ L + E
Sbjct: 297 KMLMLDAIKVG-------RIHNLEYL-RVGKTPPKMIQL---------------KYKFYE 333
Query: 234 KLVYKKIQSAIGISKAGV--SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPT 291
K +Y ++ IGI + G ++P I F ++G+ + VGYGLTES+ ++ T
Sbjct: 334 KTIYALLKKTIGIENGNFFPTAGAAVPDEICEFVHSVGIDMLVGYGLTESTATVSCTSKT 393
Query: 292 CNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDED 351
+GSVG + E+KI E NE+L +RG + +GY+K AT A+DE+
Sbjct: 394 GYDIGSVGQVMPEVEVKI--GEDNEIL---------LRGKTITKGYYKKAEATAAAIDEE 442
Query: 352 GWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLI 411
GW +TGD G+ G L L R KD S G+ + P LE + I
Sbjct: 443 GWFHTGDAGYFK-----------NGQLYLTERIKDLFKTSNGKYIAPQALETKLVIDRYI 491
Query: 412 RQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE-KTISLLYGELRKWTS 470
QI +I ++ A+IVP V AK I + D +EL + K I+L +
Sbjct: 492 DQIAIIADQRKFVSALIVPVYGFVKQYAKEKGIEYKDMTELLEHPKIIALFRARIDTLQQ 551
Query: 471 KCSF--QIGPIHVVDEPFTV 488
+ + QI ++ EPF++
Sbjct: 552 QFAHYEQIKRFTLLPEPFSM 571
>gi|448414933|ref|ZP_21577882.1| amp-forming long-chain acyl-CoA synthetase [Halosarcina pallida JCM
14848]
gi|445681630|gb|ELZ34060.1| amp-forming long-chain acyl-CoA synthetase [Halosarcina pallida JCM
14848]
Length = 677
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 132/418 (31%), Positives = 197/418 (47%), Gaps = 72/418 (17%)
Query: 57 GSD--DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLY----------DIVPA-ENGDKF 103
GSD D+A+ +YTSGTTG PKGV LTH+N + Y D VP G
Sbjct: 210 GSDPADLASLIYTSGTTGRPKGVKLTHRNFRSNVNQCYKRFAARPDKGDDVPVIGRGSVT 269
Query: 104 LSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSG 161
LS LP HV+ER G+F+ F+ G + Y + L++D +P SVP VYE LY
Sbjct: 270 LSFLPLAHVFERLAGHFMMFAAGACVAYAESPDTLREDFGLVRPTTGTSVPRVYEKLYDA 329
Query: 162 IQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARII 221
I+ Q S RR+ +A + +E A
Sbjct: 330 IRAQASESETKRRI-------FEWAVGVGREYHE----------------------ADAP 360
Query: 222 CAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTE 280
+L H +A++LV+++++ A+G +SGGGSL + Y A+G+ + GYGLTE
Sbjct: 361 GVLLSAKHRVADRLVFEQVREALGGQIDFFISGGGSLSPDLCALYHAMGLPILEGYGLTE 420
Query: 281 SSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVL--PAGSKGIVKVRGSQVMQGYF 338
+SPV+A P +G++G P+ E+++ D +V G G + VRG V +GY+
Sbjct: 421 TSPVVAVNPPEEPKIGTIGPPVTDVEVRLDDTVVGDVTGEAGGEVGELLVRGPNVTEGYW 480
Query: 339 KNPSATKQALDED---------------GWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGR 383
P T+ A +D W TGD+ + P G + R
Sbjct: 481 NRPEETEAAFTDDVPGDDASEASEGENGPWFRTGDVVELRPD----------GYVAFRER 530
Query: 384 AKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKR 441
AK +VLSTG+NV P +E+A S +I Q +V+G ++ A++VP+ + V A R
Sbjct: 531 AKQILVLSTGKNVAPGPIEDAFASSDVIEQCMVLGDGRKFVSALVVPNVDGVREWADR 588
>gi|441211758|ref|ZP_20975139.1| long-chain-fatty-acid--CoA ligase FadD15 [Mycobacterium smegmatis
MKD8]
gi|440626316|gb|ELQ88150.1| long-chain-fatty-acid--CoA ligase FadD15 [Mycobacterium smegmatis
MKD8]
Length = 599
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 130/399 (32%), Positives = 192/399 (48%), Gaps = 52/399 (13%)
Query: 39 KAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAE 98
+A D + A + + I S D AT +YTSGTTG PKG LTH NLLH+IR + P
Sbjct: 161 EAGKDVDPAELNKRLANIKSSDPATLIYTSGTTGQPKGCQLTHSNLLHEIRGQKECFPDH 220
Query: 99 --NGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVY 155
G++ L LP HV RA F+ + L +T+ ++NL ++P +ISVP V+
Sbjct: 221 LAKGERILVFLPLAHVLARAITIGAFANKVTLGFTSDIKNLVPMFGVFKPTLVISVPRVF 280
Query: 156 ETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDW 215
E +Y+ ++ AR + I+ A TA + F +++ P L+ +
Sbjct: 281 EKVYNTAEQN------ARNDGKGKIFEIA-AETAIE-----FSKAQDKGGPGLLLRV--- 325
Query: 216 LWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQV 274
H + +KLVY K+++A+G A +SGG L + FY +G+ +
Sbjct: 326 ------------KHAVFDKLVYGKLRAALGGECHAAISGGAPLGERLGHFYRGVGLSIYE 373
Query: 275 GYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVM 334
GYGLTE+S I R +GSVG + ++I D G + V+G V
Sbjct: 374 GYGLTETSAAITVNRLNDLKVGSVGRLVPGNSMRIAD-----------DGELLVKGGVVF 422
Query: 335 QGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGE 394
GY+KN TK +D DGW +TGD+G I + G L + GR K+ IV + G+
Sbjct: 423 NGYWKNEDETKAVIDADGWFHTGDLGAIDDN----------GFLTIVGRKKEIIVTAGGK 472
Query: 395 NVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 433
NV P LE+ LI Q + +G Q A+I D E
Sbjct: 473 NVAPALLEDRLRAHPLISQAMAVGDKQPFIAALITIDPE 511
>gi|227114206|ref|ZP_03827862.1| putative AMP-binding protein [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
Length = 601
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 136/495 (27%), Positives = 228/495 (46%), Gaps = 65/495 (13%)
Query: 1 MRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDD 60
+R II++ + DI + + F + D R+ +A DS D +D
Sbjct: 134 LRNIIVMDEGVNLRGSDIAQSLQEFEAQAVDDFWRDEWQARIDSRDL-----------ND 182
Query: 61 IATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF 120
+ T +YTSGTTG PKGVML + N+ Q++ D + D L LP HV+ERA +
Sbjct: 183 LFTLIYTSGTTGEPKGVMLDYTNMAMQLKLHDDRLDMSENDVSLCFLPLSHVFERAWSFV 242
Query: 121 IFSRGIELMYTAVRNL-KDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR-RVVAR 178
I RG + +Y NL ++ +Q +P M +VP YE +YS I +++ + R R+
Sbjct: 243 IMHRGAQNVYLNNTNLVREAMQTVKPTVMCAVPRFYEKVYSAIHEKVAQAPWYRQRLFNW 302
Query: 179 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 238
A+ + +A+ A + +G R +H A++LV
Sbjct: 303 AIAQGQYAFLASQTAKKGGLFRR-------------------------VMHHYADRLVLG 337
Query: 239 KIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 297
K++ +G + + G L +I LF+ +IG+++ GYG+TE+ ++ LGS
Sbjct: 338 KLRQLLGGEIRFMPAAGARLDDNIILFFRSIGIRIIYGYGMTETCATVSCWEEGRFRLGS 397
Query: 298 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 357
+G P+ E++I G + ++VRG+ +M+GYF P T EDGWL TG
Sbjct: 398 IGTPLPGIEVRI-----------GEEKEIQVRGATIMRGYFHRPQETADTFTEDGWLKTG 446
Query: 358 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 417
D G + G L + R KD + S G+ + P LE + I Q+ +I
Sbjct: 447 DAGELD----------ANGNLFITERLKDLMKTSGGKYIAPQHLEGTLGQDRFIEQVAII 496
Query: 418 GQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYG----ELRKWTSKCS 473
++ A+IVP E + A +++ + D EL + I L+ E++K S+
Sbjct: 497 ADTRKYVSALIVPCFEALEEYAHSINLKYHDRLELLRHSHIIELFEQRLREIQKELSRVE 556
Query: 474 FQIGPIHVVDEPFTV 488
Q+ ++ PF++
Sbjct: 557 -QVKKFTLLPVPFSM 570
>gi|374852348|dbj|BAL55283.1| hypothetical conserved protein [uncultured Bacteroidetes bacterium]
Length = 601
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 148/484 (30%), Positives = 228/484 (47%), Gaps = 68/484 (14%)
Query: 7 LWGKKSSVAPDI--VEEIPVF-------SYDEIIDLGRESRKAFSDSNDARKHYKYETIG 57
+W K S+ P +E++ VF S++E + LG++ D+ D R YK E +
Sbjct: 115 IWQKVRSILPHCPNLEKVYVFDPEPDATSWEEFLALGKD------DTTDLRP-YK-EAVQ 166
Query: 58 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQI---RSLYDIVPAENGDKF--LSMLPPWHV 112
+D AT++YTSGTTG PKGV+LTH N++ + RSL I + G + LS LP H
Sbjct: 167 PEDWATFLYTSGTTGTPKGVILTHHNIVSNVLTVRSLNLIPRSPEGQRLRALSFLPLNHS 226
Query: 113 YERACGYFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSA 171
+ER Y + GI + Y ++ + +L+ +PH SVP + E +Y I T +
Sbjct: 227 FERMVFYTYLAMGIGVYYAESLDTIAQNLREVKPHVFTSVPRLLEKVYERIMATAQTLTG 286
Query: 172 ARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLL 231
+R + + + Y G+ L L
Sbjct: 287 LKRTLFFWAMDLVKDYDPEAPYPLGYRLQLG----------------------------L 318
Query: 232 AEKLVYKKIQSAIGISKAG-VSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRP 290
A LV+KK + A+G + + V+G +LP H+ + G+ + GYGLTE+SPVI+
Sbjct: 319 ARTLVFKKWKEALGGNVSLIVTGAAALPQHLARIFWGAGIPIMEGYGLTETSPVISVNTF 378
Query: 291 TCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDE 350
+ LGSVG PI E++I E E G IV VRG VM GY+KNP AT + L E
Sbjct: 379 DAHRLGSVGRPIPGVEVRI---EPLEGYTEGEGEIV-VRGPNVMVGYYKNPEATAEVLKE 434
Query: 351 DGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSL 410
GW TGD+G + G L + R K+ + G+ + P +E A S
Sbjct: 435 -GWFYTGDVGKL----------DKDGFLYITDRKKELFKTAGGKYIAPQPIESALKSSLF 483
Query: 411 IRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASEL-SKEKTISLLYGELRKWT 469
I Q +V+G+ ++ P A+IVP + AK + + EL + + L+ E+ +
Sbjct: 484 IEQAMVVGEYRKFPAALIVPSFPNLEKWAKEQGLSYTSREELVHHPRVVELIQAEVDRIN 543
Query: 470 SKCS 473
++ S
Sbjct: 544 AQFS 547
>gi|269964650|ref|ZP_06178888.1| Putative long-chain-fatty-acid--CoA ligase [Vibrio alginolyticus
40B]
gi|269830549|gb|EEZ84770.1| Putative long-chain-fatty-acid--CoA ligase [Vibrio alginolyticus
40B]
Length = 602
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 130/431 (30%), Positives = 207/431 (48%), Gaps = 55/431 (12%)
Query: 58 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERAC 117
DD+ T +YTSGTTG PKGVML + N+ Q+ + D L LP HV+ERA
Sbjct: 177 EDDLLTLIYTSGTTGQPKGVMLDYANIAAQLEGHDQRLSLSQSDVSLCFLPLSHVFERAW 236
Query: 118 GYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 176
+++ +G Y ++D L + +P M +VP YE ++S I +++ + R+++
Sbjct: 237 TFYVLYKGATNCYLQDTMQVRDALSQVRPTVMCAVPRFYEKIFSAIHEKVSRAPIHRKIM 296
Query: 177 ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLV 236
+ + A C + ++QPS L L + LA+KLV
Sbjct: 297 FTWAVNMGAKMAA--------C-HQEKRQPSLL---------------LRKSYALADKLV 332
Query: 237 YKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVL 295
K+++ +G + GG L I F+ AIG+ V++GYG+TE++ ++ C
Sbjct: 333 LSKLRALLGGQINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTATVSCWDDKCFNP 392
Query: 296 GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLN 355
S+G + ++KI E NE+L VRG VM+GY+K P T++ DE G+L
Sbjct: 393 DSIGMSMPGAQVKI--GENNEIL---------VRGPMVMRGYYKMPEETEKTFDEHGFLK 441
Query: 356 TGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIV 415
TGD G+I + G L + R K+ + S G+ + P +E A + I QI
Sbjct: 442 TGDAGYIDEN----------GNLFITDRIKELMKTSGGKYIAPQMIEGAIGKDHFIEQIA 491
Query: 416 VIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLLYGELRK 467
VI ++ A+IVP + + AK L+I + D EL K EK ++ L EL K
Sbjct: 492 VIADTRKFVSALIVPCYDSLEEYAKELNIKYHDRVELIKHHQVVEMLEKRVNDLQKELAK 551
Query: 468 WTSKCSFQIGP 478
+ F++ P
Sbjct: 552 FEQVKKFKLLP 562
>gi|91227124|ref|ZP_01261608.1| putative long-chain-fatty-acid-CoA ligase [Vibrio alginolyticus
12G01]
gi|91188776|gb|EAS75063.1| putative long-chain-fatty-acid-CoA ligase [Vibrio alginolyticus
12G01]
Length = 602
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 129/431 (29%), Positives = 206/431 (47%), Gaps = 55/431 (12%)
Query: 58 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERAC 117
DD+ T +YTSGTTG PKGVML + N+ Q+ + D L LP HV+ERA
Sbjct: 177 EDDLLTLIYTSGTTGQPKGVMLDYANIAAQLEGHDQRLSLSQSDVSLCFLPLSHVFERAW 236
Query: 118 GYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 176
+++ +G Y ++D L + +P M +VP YE ++S I +++ + R+++
Sbjct: 237 TFYVLYKGATNCYLQDTMQVRDALSQVRPTVMCAVPRFYEKIFSAIHEKVSRAPIHRKIM 296
Query: 177 ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLV 236
+ + A + ++QPS L L + LA+KLV
Sbjct: 297 FTWAVNMGAKMAA---------CHQEKRQPSLL---------------LRKSYALADKLV 332
Query: 237 YKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVL 295
K+++ +G + GG L I F+ AIG+ V++GYG+TE++ ++ C
Sbjct: 333 LSKLRALLGGQINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTATVSCWDDKCFNP 392
Query: 296 GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLN 355
S+G + ++KI E NE+L VRG VM+GY+K P T++ DE G+L
Sbjct: 393 DSIGMSMPGAQVKI--GENNEIL---------VRGPMVMRGYYKMPEETEKTFDEHGFLK 441
Query: 356 TGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIV 415
TGD G+I + G L + R K+ + S G+ + P +E A + I QI
Sbjct: 442 TGDAGYIDEN----------GNLFITDRIKELMKTSGGKYIAPQMIEGAIGKDHFIEQIA 491
Query: 416 VIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLLYGELRK 467
VI ++ A+IVP + + AK L+I + D EL K EK ++ L EL K
Sbjct: 492 VIADTRKFVSALIVPCYDSLEEYAKELNIKYHDRVELIKHHQVVEMLEKRVNDLQKELAK 551
Query: 468 WTSKCSFQIGP 478
+ F++ P
Sbjct: 552 FEQVKKFKLLP 562
>gi|340622816|ref|YP_004741268.1| Long-chain acyl-CoA synthetase [Capnocytophaga canimorsus Cc5]
gi|339903082|gb|AEK24161.1| Long-chain acyl-CoA synthetase [Capnocytophaga canimorsus Cc5]
Length = 592
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 133/478 (27%), Positives = 229/478 (47%), Gaps = 77/478 (16%)
Query: 18 IVEEIP----VFSYDEI---------IDLGRESRKAFSDSNDARKHYKYETIGSDDIATY 64
I E++P ++++DE+ +LG ++ S+ N+ +H + + +DD+AT
Sbjct: 125 IREKLPLLEQIYTFDEVKNAQNWHILSELGADT----SNQNEVERHK--DNVKADDLATI 178
Query: 65 VYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSR 124
+YTSGTT PKGVML+H+N++ I + D +P + G + LS LP H++ER YF
Sbjct: 179 IYTSGTTARPKGVMLSHRNIISNIINCQDRLPVKRGSRCLSFLPVCHIFERMLIYFYQYN 238
Query: 125 GIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRI 183
+ + + ++ + D+L+ +P M VP + E +Y I + + + +R + + +
Sbjct: 239 CMRIYFAESIEKMGDNLREVKPQMMTVVPRLVEKVYDKIYAKGASLTGFKRKIFFWALNL 298
Query: 184 SFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSA 243
F Y L W + + +A KLV++K A
Sbjct: 299 GFDYE--------------------LYGANGWFYQMKLA--------IARKLVFRKWHEA 330
Query: 244 IGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNV--LGSVGH 300
+G + VSG L + + A G+ + GYGLTE++PVIA R +G+VG
Sbjct: 331 LGGELELMVSGSAPLQSRLARIFAAAGLHIVEGYGLTETAPVIAVNREAGRYWKIGTVGK 390
Query: 301 PINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIG 360
PIN+ E+KI D G + +G VM GY+K+P T+Q++ DG+ +TGDIG
Sbjct: 391 PINNLEVKIAD-----------DGEILCKGENVMLGYYKDPELTQQSIT-DGFFHTGDIG 438
Query: 361 WIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQD 420
+ + L + R K+ S G+ + P +E +S I Q +V+G+
Sbjct: 439 ELDGEN----------FLKITDRKKEIFKTSGGKYIAPQMIENLLKQSRFIEQAMVVGEG 488
Query: 421 QRRPGAIIVPDKEEVLMAAKRLSI-VHADASELSKEKTISLLYGELRKWTSKCSFQIG 477
++ P A I + E V A+R I + +E++K K + Y ++K K + +G
Sbjct: 489 EKMPAAFIQINFEFVKEWARRHQIPLSGTYAEMAKNKAV---YDRIQKEVHKVNSHLG 543
>gi|406673705|ref|ZP_11080926.1| hypothetical protein HMPREF9700_01468 [Bergeyella zoohelcum CCUG
30536]
gi|405586170|gb|EKB59962.1| hypothetical protein HMPREF9700_01468 [Bergeyella zoohelcum CCUG
30536]
Length = 593
Score = 178 bits (451), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 146/487 (29%), Positives = 230/487 (47%), Gaps = 87/487 (17%)
Query: 21 EIP----VFSYDEI---------IDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYT 67
EIP VFS+DEI +DLG S+++ + +A ++ I DD+AT +YT
Sbjct: 127 EIPTLQGVFSFDEIKGCANWKEVLDLG--SQESGQEEVEAIRN----IIKEDDLATIIYT 180
Query: 68 SGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDK-----FLSMLPPWHVYERACGYFIF 122
SGTTG PKGVML+HKN++ + + +P ++G K LS LP H++ER +
Sbjct: 181 SGTTGKPKGVMLSHKNIVSNVLASVPRIPRKSGLKNTDTVVLSFLPICHIFERMIYHLYQ 240
Query: 123 SRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALI 181
G + + ++ + ++++ +PH M VP + E +Y I + ++A + ++ +
Sbjct: 241 YNGFSIYFAESIEKMGENIKEVKPHIMTVVPRLIEKVYDKIYDK---GTSAGGLKSKIFL 297
Query: 182 RISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQ 241
A K I +PS L +LA+KLV+KK +
Sbjct: 298 WALGVMKAKKGI----------SKPSGLK------------------EILADKLVFKKWR 329
Query: 242 SAIGISKAG-VSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGH 300
+G + VSG +L ++ ++ G+ + GYGLTE+SPVI+ +GSVGH
Sbjct: 330 EGLGGNIITLVSGSAALSARLNKMFQNAGIPILEGYGLTETSPVISVNSFGRIKVGSVGH 389
Query: 301 PINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIG 360
P+++ E+KI+ S G + V+G V GY+KN TK+ EDG+ TGDIG
Sbjct: 390 PLDNLEVKIL-----------SDGEIAVKGPSVFIGYYKNEEMTKEVFTEDGFFKTGDIG 438
Query: 361 WIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQD 420
G L + R K+ S G+ V P +E A S I QI+V+G+
Sbjct: 439 HFDEE----------GYLHITDRKKEMFKTSGGKYVAPQVIENMAKASKFIEQIMVVGEG 488
Query: 421 QRRPGAIIVPDKEEVLMAAKRLSIVHAD-------ASELSK--EKTISLLYGELRKWTSK 471
++ P A + PD V A R + + EL K E+ I L +L KW
Sbjct: 489 EKMPAAFVQPDFAFVKNWAIRKGYTIGETPEEMVKSPELRKRLEREIDYLNTKLGKWEQV 548
Query: 472 CSFQIGP 478
F++ P
Sbjct: 549 KKFELTP 555
>gi|229821075|ref|YP_002882601.1| AMP-dependent synthetase and ligase [Beutenbergia cavernae DSM
12333]
gi|229566988|gb|ACQ80839.1| AMP-dependent synthetase and ligase [Beutenbergia cavernae DSM
12333]
Length = 608
Score = 178 bits (451), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 126/401 (31%), Positives = 192/401 (47%), Gaps = 55/401 (13%)
Query: 39 KAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIR----SLYDI 94
+A D DA+ + + +DD+AT +YTSGTTG PKGV LTH N LH +R SL ++
Sbjct: 156 EAGRDVEDAQIEARTAALRADDLATVIYTSGTTGRPKGVELTHGNFLHLVRNGVASLGEV 215
Query: 95 VPAENGDKFLSMLPPWHVYERACGYF-IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPL 153
+ + L +P HV+ R + S G+ R L DL + P ++++VP
Sbjct: 216 C-NQPCSRTLLFMPLAHVFARFIEVLCVTSAGVLGHSPGTRTLTQDLASFSPTFLLAVPR 274
Query: 154 VYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALI 213
V+E +Y+ +++ T R A + I+++ + +PS
Sbjct: 275 VFEKVYNSAEQKAGTGVRLRLFRWSAKVAITYSRAG------------DSARPS------ 316
Query: 214 DWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKV 272
+L H LA +LV+ K+++A+G + + VSGG L + F+ IGV V
Sbjct: 317 ---------PVLRAQHALAGRLVHGKLRAAMGGALEYAVSGGAPLGQRLGHFFRGIGVTV 367
Query: 273 QVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQ 332
GYGLTES+ A RP +G+VG TEI I D G + VRG
Sbjct: 368 LEGYGLTESTAPTAVNRPERIKIGTVGPAFPGTEIAIAD-----------DGEILVRGGH 416
Query: 333 VMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLST 392
V +GY P AT +A DGW +TGD+G + G L + GR K+ I+ +
Sbjct: 417 VFRGYRGAPDATAEAFTPDGWFHTGDLGTL----------DADGYLSITGRRKEIIITAG 466
Query: 393 GENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 433
G+NV P LE+ L+ Q+VV+G + GA++ D +
Sbjct: 467 GKNVAPAALEDRLRGHPLVSQVVVVGDQRPFIGALVTIDAD 507
>gi|227327104|ref|ZP_03831128.1| putative AMP-binding protein [Pectobacterium carotovorum subsp.
carotovorum WPP14]
Length = 601
Score = 178 bits (451), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 138/495 (27%), Positives = 229/495 (46%), Gaps = 65/495 (13%)
Query: 1 MRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDD 60
+R II++ + DIV+ + F + D RE + DS D +D
Sbjct: 134 LRNIIVMDEGVNLRGSDIVQSLCEFEAQAVDDFWREEWQTRIDSRDL-----------ND 182
Query: 61 IATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF 120
+ T +YTSGTTG PKGVML + N+ Q++ D + D L LP HV+ERA +
Sbjct: 183 LFTLIYTSGTTGEPKGVMLDYTNMAVQLKLHDDRLDMSENDVSLCFLPLSHVFERAWSFV 242
Query: 121 IFSRGIELMYTAVRNL-KDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR-RVVAR 178
I RG + +Y + NL + +Q +P M +VP YE +YS I +++ + R R+
Sbjct: 243 IMHRGAQNVYLSDTNLVRAAMQAVKPTVMCAVPRFYEKVYSAIHEKVAQAPWYRQRLFNW 302
Query: 179 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 238
AL + A+ A + +G R +H A++LV
Sbjct: 303 ALAQGQHAFLASQAAKKGGLFRR-------------------------VMHRYADRLVLG 337
Query: 239 KIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 297
K++ +G + + G L +I LF+ +IG+++ GYG+TE+ ++ LGS
Sbjct: 338 KLRQLLGGEIRFMPAAGARLDDNIILFFRSIGIRIIYGYGMTETCATVSCWEEGRFRLGS 397
Query: 298 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 357
+G P+ E++I G + ++VRG+ +M+GYF P T + EDGWL TG
Sbjct: 398 IGTPLPGIEVRI-----------GEEKEIQVRGATIMRGYFHRPQETAETFTEDGWLKTG 446
Query: 358 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 417
D G + + G L + R KD + S G+ + P LE + I Q+ +I
Sbjct: 447 DAGELDAN----------GNLFITERLKDLMKTSGGKYIAPQHLEGTLGQDRFIEQVAII 496
Query: 418 GQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYG----ELRKWTSKCS 473
++ A+IVP E + A +++ + D EL + I L+ E++K S+
Sbjct: 497 ADTRKYVSALIVPCFEALEEYAHSINLKYHDRLELLRHSHIIELFEQRLREMQKELSRVE 556
Query: 474 FQIGPIHVVDEPFTV 488
Q+ ++ PF++
Sbjct: 557 -QVKKFTLLPVPFSM 570
>gi|315223493|ref|ZP_07865349.1| long-chain-fatty-acid--CoA ligase [Capnocytophaga ochracea F0287]
gi|420160444|ref|ZP_14667227.1| AMP-binding enzyme [Capnocytophaga ochracea str. Holt 25]
gi|314946528|gb|EFS98520.1| long-chain-fatty-acid--CoA ligase [Capnocytophaga ochracea F0287]
gi|394760638|gb|EJF43152.1| AMP-binding enzyme [Capnocytophaga ochracea str. Holt 25]
Length = 599
Score = 178 bits (451), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 129/414 (31%), Positives = 214/414 (51%), Gaps = 49/414 (11%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYD-IVPAENGDKFLSMLPPWHVYERAC 117
DD+ T +YTSGTTG PKGVMLT++NL Q+ + + +N D L+ LP HV+ERA
Sbjct: 180 DDLFTIIYTSGTTGEPKGVMLTYENLAFQMVGHTERLSTVDNTDTSLAFLPLSHVFERAW 239
Query: 118 GYFIFSRGIELMYTAVRNL-KDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 176
YF + + + Y NL ++ L +P M +VP YE +++ + + SS V
Sbjct: 240 TYFCLYKAVTVYYLDDTNLVREALAEVRPTLMCAVPRFYEKIFATVHDRADASS----FV 295
Query: 177 ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLV 236
R L R++ A KR+ L K+PS+ +L + +K+V
Sbjct: 296 KRKLFRLAIA--TGKRV---LALREQGKKPSF---------------VLQKAYNFFDKMV 335
Query: 237 YKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVL 295
YKK++ A+G K GG +L I F+++IG+ +++GYG+TE++ I+
Sbjct: 336 YKKLKEALGGRIKFMPCGGANLEPSIGRFFQSIGINLKLGYGMTETTATISCWGDDRINP 395
Query: 296 GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLN 355
SVG+ + + +++I E NE+L V+G VM+GY+KNP T +A DG+L
Sbjct: 396 QSVGNVMPNVQVRI--GEENEIL---------VKGGMVMKGYYKNPEETAKAFTPDGYLR 444
Query: 356 TGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIV 415
TGD G + +++ L + R K+ + S G+ + P +E + +LI QI
Sbjct: 445 TGDAGNLDGNNN----------LFITERIKELMKTSNGKYIAPQMIEGKVGKYNLIEQIA 494
Query: 416 VIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE-KTISLLYGELRKW 468
VI ++ A+IVP+ E + A K L+I + +++ K + I + +L+K+
Sbjct: 495 VIADGKKFVSALIVPNYEMLSQALKDLNIKCKNTADMIKHSQVIEYIGKQLQKF 548
>gi|255531463|ref|YP_003091835.1| AMP-dependent synthetase and ligase [Pedobacter heparinus DSM 2366]
gi|255344447|gb|ACU03773.1| AMP-dependent synthetase and ligase [Pedobacter heparinus DSM 2366]
Length = 637
Score = 178 bits (451), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 125/396 (31%), Positives = 198/396 (50%), Gaps = 50/396 (12%)
Query: 55 TIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPA-ENGDKFLSMLPPWHVY 113
TI DI++ +YTSGTTG PKGVML+H N + ++ +P + + FLS LP HV+
Sbjct: 186 TILPADISSLIYTSGTTGTPKGVMLSHSNFVENVKVCLQQIPVIDETETFLSFLPLSHVF 245
Query: 114 ERACGYFIF-SRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSA 171
ER Y + ++G + Y ++ L ++ +P M VP + E ++ K + + +A
Sbjct: 246 ERTATYHVCCAQGCRIAYAQSLELLAKNMAEIKPTVMSCVPRLLEKIHD---KALKSGTA 302
Query: 172 ARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLL 231
+ ++ + +++I E K P ++ L
Sbjct: 303 GGGLKSKIFLWALEVGQDYRKIKEA------GKTPG---------------MVMRAKKTL 341
Query: 232 AEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRP 290
AEKLV+ KI+ G K +SGG +LP ++ F+ +G+K+ G+GLTE+SPV+A
Sbjct: 342 AEKLVFSKIKEKTGGRLKFMISGGAALPKNVGEFFGNLGIKILEGFGLTETSPVMAVTEY 401
Query: 291 TCNVLGSVGHPINHTEIKIVDAETNEVLPAGS-----------KGIVKVRGSQVMQGYFK 339
V G+VG I E+ I D ET +++ + +G + VRG VMQGYF
Sbjct: 402 HRQVYGTVGRIIPGIEVGIQDIETRQMISIQTHDTFMEDFECAEGEIIVRGHCVMQGYFN 461
Query: 340 NPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPL 399
P+ T + +D+D W +TGDIG R G L + R K+ IV + G+NV P
Sbjct: 462 KPAETAEVIDKDNWFHTGDIG-----------RFYRGNLQITDRLKNMIVNAYGKNVYPT 510
Query: 400 ELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 435
+E L+S I QI +IG + AI++P+KE +
Sbjct: 511 PVENIYLKSLKIDQIFLIGDKREYLTAIVIPNKENL 546
>gi|221066952|ref|ZP_03543057.1| AMP-dependent synthetase and ligase [Comamonas testosteroni KF-1]
gi|220711975|gb|EED67343.1| AMP-dependent synthetase and ligase [Comamonas testosteroni KF-1]
Length = 648
Score = 178 bits (451), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 135/433 (31%), Positives = 210/433 (48%), Gaps = 43/433 (9%)
Query: 61 IATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF 120
+A VYTSGTTG PKGVMLTH N++ + ++ V A D FLS LP H +ER GY+
Sbjct: 217 LAGIVYTSGTTGKPKGVMLTHDNVVSDLHAVMQRVKAFPEDVFLSFLPLSHTFERTAGYY 276
Query: 121 I-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 178
+ + G + Y +V L D+++ +P +ISVP +YE +Y+ +Q+ + +SS R++
Sbjct: 277 LAIATGSCVAYARSVAQLAQDMKQVKPTVLISVPRIYERVYAKVQESLASSSLKRKLFEA 336
Query: 179 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 238
A+ + +KR FC + L A W A P LL +
Sbjct: 337 AVNK------GWKR----FCARQGIPLSEQLDAQASW-------ASALPAWLLRSLVAQP 379
Query: 239 KIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSV 298
+ G + VSGG L I + +G+ + GYG+TE++PV++A N +V
Sbjct: 380 LLAQFGGRLRVAVSGGAPLSPTIARCFLGLGLPMLQGYGMTETAPVVSANGLDDNWPDTV 439
Query: 299 GHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGD 358
G + E++I D + ++V G VM+GY+ P T +A DGWL TGD
Sbjct: 440 GRVLPGIEVRIGDDQE-----------LQVSGPVVMRGYWNRPEDTAKAFTADGWLRTGD 488
Query: 359 IGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIG 418
I GR R ++GR K+ IV STGE V P ++E+A L L Q+ V+G
Sbjct: 489 QAAI----ENGRIR-------IKGRIKEIIVTSTGEKVPPNDVEQAILVDPLFEQVFVVG 537
Query: 419 QDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSKCSFQIGP 478
+D+ I V + E + A+ + + DAS L + K T + P
Sbjct: 538 EDRPFIACIAVVSQMEWEVLARSVGLNPDDASSLHHAAAEREALARIEKQTRSFARYAVP 597
Query: 479 --IHVVDEPFTVN 489
IH+V + ++++
Sbjct: 598 RAIHLVRDSWSID 610
>gi|254229751|ref|ZP_04923159.1| putative long-chain-fatty-acid--CoA ligase homolog [Vibrio sp.
Ex25]
gi|262392424|ref|YP_003284278.1| long-chain-fatty-acid--CoA ligase [Vibrio sp. Ex25]
gi|151937718|gb|EDN56568.1| putative long-chain-fatty-acid--CoA ligase homolog [Vibrio sp.
Ex25]
gi|262336018|gb|ACY49813.1| long-chain-fatty-acid--CoA ligase [Vibrio sp. Ex25]
Length = 602
Score = 178 bits (451), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 129/437 (29%), Positives = 208/437 (47%), Gaps = 55/437 (12%)
Query: 52 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWH 111
+ E DD+ T +YTSGTTG PKGVML + N+ Q+ + D L LP H
Sbjct: 171 RLEQAKEDDLLTLIYTSGTTGQPKGVMLDYANIAAQLEGHDQRLSLSQSDVSLCFLPLSH 230
Query: 112 VYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSS 170
V+ERA +++ +G Y ++D L + +P M +VP YE ++S I +++ +
Sbjct: 231 VFERAWTFYVLYKGATNCYLQDTMQVRDALSQVRPTVMCAVPRFYEKIFSAIHEKVSRAP 290
Query: 171 AARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHL 230
R+++ + + A + ++QPS + L +
Sbjct: 291 IHRKIMFTWAVNMGAKMAA---------CHQEKRQPSLM---------------LRKSYA 326
Query: 231 LAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARR 289
LA+KLV K+++ +G + GG L I F+ AIG+ V++GYG+TE++ ++
Sbjct: 327 LADKLVLSKLRALLGGQINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTATVSCWD 386
Query: 290 PTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALD 349
C S+G + ++KI E NE+L VRG VM+GY+K P T++ D
Sbjct: 387 DKCFNPDSIGMSMPGAQVKI--GENNEIL---------VRGPMVMRGYYKMPEETEKTFD 435
Query: 350 EDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSS 409
E G+L TGD G+I + G L + R K+ + S G+ + P +E A +
Sbjct: 436 EHGFLKTGDAGYIDEN----------GNLFITDRIKELMKTSGGKYIAPQMIEGAIGKDH 485
Query: 410 LIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLL 461
I QI VI ++ A+IVP + + AK L+I + D EL K EK ++ L
Sbjct: 486 FIEQIAVIADTRKFVSALIVPCFDSLEEYAKELNIKYHDRVELIKHHQVVEMLEKRVNDL 545
Query: 462 YGELRKWTSKCSFQIGP 478
EL K+ F++ P
Sbjct: 546 QKELAKFEQVKKFKLLP 562
>gi|423316667|ref|ZP_17294572.1| hypothetical protein HMPREF9699_01143 [Bergeyella zoohelcum ATCC
43767]
gi|405583008|gb|EKB56979.1| hypothetical protein HMPREF9699_01143 [Bergeyella zoohelcum ATCC
43767]
Length = 593
Score = 178 bits (451), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 146/487 (29%), Positives = 230/487 (47%), Gaps = 87/487 (17%)
Query: 21 EIP----VFSYDEI---------IDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYT 67
EIP VFS+DEI +DLG S+++ + +A ++ I DD+AT +YT
Sbjct: 127 EIPTLQGVFSFDEIKGCANWKEVLDLG--SQESGQEEVEAIRN----IIKEDDLATIIYT 180
Query: 68 SGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDK-----FLSMLPPWHVYERACGYFIF 122
SGTTG PKGVML+HKN++ + + +P ++G K LS LP H++ER +
Sbjct: 181 SGTTGKPKGVMLSHKNIVSNVVASVPRIPRKSGLKNTDTVVLSFLPICHIFERMIYHLYQ 240
Query: 123 SRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALI 181
G + + ++ + ++++ +PH M VP + E +Y I + ++A + ++ +
Sbjct: 241 YNGFSIYFAESIEKMGENIKEVKPHIMTVVPRLIEKVYDKIYDK---GTSAGGLKSKIFL 297
Query: 182 RISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQ 241
A K I +PS L +LA+KLV+KK +
Sbjct: 298 WALGVMKAKKGI----------SKPSGLK------------------EILADKLVFKKWR 329
Query: 242 SAIGISKAG-VSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGH 300
+G + VSG +L ++ ++ G+ + GYGLTE+SPVI+ +GSVGH
Sbjct: 330 EGLGGNIITLVSGSAALSARLNKMFQNAGIPILEGYGLTETSPVISVNSFGRIKVGSVGH 389
Query: 301 PINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIG 360
P+++ E+KI+ S G + V+G V GY+KN TK+ EDG+ TGDIG
Sbjct: 390 PLDNLEVKIL-----------SDGEIAVKGPSVFIGYYKNEEMTKEVFTEDGFFKTGDIG 438
Query: 361 WIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQD 420
G L + R K+ S G+ V P +E A S I QI+V+G+
Sbjct: 439 HFDEE----------GYLHITDRKKEMFKTSGGKYVAPQVIENMAKASKFIEQIMVVGEG 488
Query: 421 QRRPGAIIVPDKEEVLMAAKRLSIVHAD-------ASELSK--EKTISLLYGELRKWTSK 471
++ P A + PD V A R + + EL K E+ I L +L KW
Sbjct: 489 EKMPAAFVQPDFAFVKNWAIRKGYTIGETPEEMVKSPELRKRLEREIDYLNTKLGKWEQV 548
Query: 472 CSFQIGP 478
F++ P
Sbjct: 549 KKFELTP 555
>gi|365879381|ref|ZP_09418805.1| putative Long-chain-fatty-acid--CoA ligase [Bradyrhizobium sp. ORS
375]
gi|365292632|emb|CCD91336.1| putative Long-chain-fatty-acid--CoA ligase [Bradyrhizobium sp. ORS
375]
Length = 641
Score = 178 bits (451), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 124/373 (33%), Positives = 189/373 (50%), Gaps = 49/373 (13%)
Query: 60 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGY 119
D+A VYTSGTTG PKGVML H N++ +++++ + A + D FLS LP H +ER GY
Sbjct: 219 DLAAIVYTSGTTGRPKGVMLPHDNVVSNLKAIHQRLAAASEDVFLSFLPLSHTFERTAGY 278
Query: 120 FI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 177
+ + G + Y +V+ L +DL +P +ISVP +YE +YS + +S +A
Sbjct: 279 YYPIAIGASVAYARSVKQLPEDLLEVRPTILISVPRIYERIYSLVMHHRAVASP----LA 334
Query: 178 RALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVY 237
RAL+ ++ A + F + S L L WP L +++V
Sbjct: 335 RALMDMTIAVGGRR-----FDAQHGRGAQSALDRLA------------WP---LLKRIVA 374
Query: 238 KKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLG 296
K+ + G + VSGG + + + A+G++V GYG+TE+SPV++ P N
Sbjct: 375 DKVLARFGGRLQVAVSGGAPIAEPVVRLFLALGLEVLQGYGMTETSPVVSVNTPDDNDPR 434
Query: 297 SVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNT 356
+VG + E++I G+ + VRG VM GY+ P T + + DGWL+T
Sbjct: 435 TVGRALPGVEVRI-----------GANDELMVRGPNVMLGYWHKPDETARIKEADGWLHT 483
Query: 357 GDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVV 416
GD I H R + + GR KD +V STGE + P +LE A L L Q +V
Sbjct: 484 GDQASI--DHGR---------ITITGRIKDILVTSTGEKIAPADLETAILTDPLFEQAIV 532
Query: 417 IGQDQRRPGAIIV 429
IG+++ AI+V
Sbjct: 533 IGENRPFLAAIVV 545
>gi|118470901|ref|YP_888530.1| AMP-binding protein [Mycobacterium smegmatis str. MC2 155]
gi|399988555|ref|YP_006568905.1| Long-chain fatty-acid-CoA ligase [Mycobacterium smegmatis str. MC2
155]
gi|118172188|gb|ABK73084.1| AMP-binding enzyme [Mycobacterium smegmatis str. MC2 155]
gi|399233117|gb|AFP40610.1| Long-chain fatty-acid-CoA ligase [Mycobacterium smegmatis str. MC2
155]
Length = 599
Score = 178 bits (451), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 131/402 (32%), Positives = 192/402 (47%), Gaps = 52/402 (12%)
Query: 36 ESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIV 95
E +A D + A + I S D AT +YTSGTTG PKG LTH NLLH+IR +
Sbjct: 158 ELAEAGKDVDPAELDKRLANIKSSDPATLIYTSGTTGQPKGCQLTHSNLLHEIRGQKECF 217
Query: 96 PAE--NGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVP 152
P G++ L LP HV RA F+ + L +T+ ++NL ++P +ISVP
Sbjct: 218 PDHLAKGERILVFLPLAHVLARAITIGAFANKVTLGFTSDIKNLVPMFGVFKPTLVISVP 277
Query: 153 LVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVAL 212
V+E +Y+ ++ AR + I+ A TA + F +++ P L+ +
Sbjct: 278 RVFEKVYNTAEQN------ARNDGKGKIFEIA-AETAIE-----FSKAQDKGGPGLLLRV 325
Query: 213 IDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVK 271
H + +KLVY K+++A+G A +SGG L + FY +G+
Sbjct: 326 ---------------KHAVFDKLVYGKLRAALGGECHAAISGGAPLGERLGHFYRGVGLS 370
Query: 272 VQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGS 331
+ GYGLTE+S I R +GSVG + ++I D G + V+G
Sbjct: 371 IYEGYGLTETSAAITVNRLNDLKVGSVGRLVPGNSMRIAD-----------DGELLVKGG 419
Query: 332 QVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLS 391
V GY+KN TK +D DGW +TGD+G I + G L + GR K+ IV +
Sbjct: 420 VVFNGYWKNEDETKAVIDADGWFHTGDLGAIDDN----------GFLTIVGRKKEIIVTA 469
Query: 392 TGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 433
G+NV P LE+ LI Q + +G Q A+I D E
Sbjct: 470 GGKNVAPALLEDRLRAHPLISQAMAVGDKQPFIAALITIDPE 511
>gi|386315854|ref|YP_006012019.1| AMP-dependent synthetase and ligase [Shewanella putrefaciens 200]
gi|319428479|gb|ADV56553.1| AMP-dependent synthetase and ligase [Shewanella putrefaciens 200]
Length = 598
Score = 178 bits (451), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 128/416 (30%), Positives = 205/416 (49%), Gaps = 58/416 (13%)
Query: 44 SNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKF 103
+ +A + + E DD+ T +YTSGTTG+PKGVML ++N+ IR + +GD
Sbjct: 165 TQEAELNQRLEAANLDDLLTLIYTSGTTGDPKGVMLDYRNMASTIRQHDQKLAFSSGDVS 224
Query: 104 LSMLPPWHVYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLYSGI 162
L+ LP HV+ER+ +++ RG +Y + +K+ + +PH + VP E +YS +
Sbjct: 225 LAFLPLSHVFERSWSFYVLCRGGHNVYLQNTQRVKEAISAVRPHTLCVVPRFLEKVYSAV 284
Query: 163 QKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIIC 222
Q ++ S +R+ + +R+ +R +E Q++ + WL
Sbjct: 285 QDKVAKSPESRKKMFAWAMRVG------ERQFEA-----GQRRAKGSL----WL------ 323
Query: 223 AILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTES 281
++ W LA KLVY K+Q+ +G K GG +L +++ F+ AIG+ V GYG+TE+
Sbjct: 324 SLQWQ---LANKLVYSKLQAVLGGRLKFMPCGGAALDLNVGSFFHAIGIPVLCGYGMTET 380
Query: 282 SPVIAARRPTCNVL-----GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQG 336
+ + TCN L GS G P+ TEIK+ + +E+L VRG+ VM+G
Sbjct: 381 NATV-----TCNTLDNRVPGSNGQPLLETEIKL--GKDDEIL---------VRGATVMRG 424
Query: 337 YFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENV 396
Y+ P T A EDGWL TGD G + G L + R K+ + S G+ +
Sbjct: 425 YYNRPEDTAAAF-EDGWLKTGDAGRFDAN----------GNLFITDRIKELMKTSNGKYI 473
Query: 397 EPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASEL 452
P +E R I Q+ +I + A+IVP E + AK + + + EL
Sbjct: 474 APQRVEGTVGRCPFIEQVAIIADARNYVTALIVPAFESLEAWAKEKGLKYESSLEL 529
>gi|256839560|ref|ZP_05545069.1| conserved hypothetical protein [Parabacteroides sp. D13]
gi|256738490|gb|EEU51815.1| conserved hypothetical protein [Parabacteroides sp. D13]
Length = 633
Score = 177 bits (450), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 124/429 (28%), Positives = 214/429 (49%), Gaps = 54/429 (12%)
Query: 54 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 113
+++G+DD AT YTSGTT +PKGV+LTH+N + V ++ + L +LP H +
Sbjct: 173 QSLGNDDYATITYTSGTTADPKGVILTHRNYTANVEQALTCVDIDDTWRTLVILPLDHCF 232
Query: 114 ERACGYFIF-SRG-----IELMYTAVRNLKD---DLQRYQPHYMISVPLVYETLYSGIQK 164
G++IF S+G +++ T + LK+ +++ ++P+ ++SVP + + I++
Sbjct: 233 AHVVGFYIFMSKGASVATVQVGRTGMETLKNIPINIKEFKPYLILSVPALAKNFKKNIEQ 292
Query: 165 QIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAI 224
I + +RI + Y EG +
Sbjct: 293 GIRAQGKNAVRLFNLALRIGYIYNGDSDEEEG----------------------KGFRVF 330
Query: 225 LWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSP 283
L PL L +KL++ K++ G K + GG L + FY A+G+ + GYGL+E++P
Sbjct: 331 LKPLIRLFDKLLFTKVRENFGGELKFFIGGGALLDKDLQKFYYALGIPMYQGYGLSEATP 390
Query: 284 VIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSA 343
+I+ P + GS G + ++KI D + N VLP G KG + +RG VM GY+KNP++
Sbjct: 391 IISTNGPRRHTFGSSGVLVRPLDLKICDMDGN-VLPPGEKGEIVIRGENVMAGYWKNPAS 449
Query: 344 TKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEE 403
T + E GWL TGD+G++ G+L + GR K ++ S GE P +EE
Sbjct: 450 TADTVKE-GWLYTGDMGYMR-----------DGLLYVLGRFKSLLIGSDGEKYSPEGIEE 497
Query: 404 AALR-SSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHAD---ASELSKEKTIS 459
A + SS I Q+++ A++VP+KE + R + H + S+ +E+ I
Sbjct: 498 ALVEHSSCIDQLILYNNQSPYTTALLVPNKERL-----RKHLAHQNLDLTSDQGREEAIR 552
Query: 460 LLYGELRKW 468
++ ++ ++
Sbjct: 553 IIQRQIDRF 561
>gi|120600799|ref|YP_965373.1| AMP-dependent synthetase and ligase [Shewanella sp. W3-18-1]
gi|120560892|gb|ABM26819.1| AMP-dependent synthetase and ligase [Shewanella sp. W3-18-1]
Length = 598
Score = 177 bits (450), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 128/416 (30%), Positives = 205/416 (49%), Gaps = 58/416 (13%)
Query: 44 SNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKF 103
+ +A + + E DD+ T +YTSGTTG+PKGVML ++N+ IR + +GD
Sbjct: 165 TQEAELNQRLEAANLDDLLTLIYTSGTTGDPKGVMLDYRNMASTIRQHDQKLAFSSGDVS 224
Query: 104 LSMLPPWHVYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLYSGI 162
L+ LP HV+ER+ +++ RG +Y + +K+ + +PH + VP E +YS +
Sbjct: 225 LAFLPLSHVFERSWSFYVLCRGGHNVYLQNTQRVKEAISAVRPHTLCVVPRFLEKVYSAV 284
Query: 163 QKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIIC 222
Q ++ S +R+ + +R+ +R +E Q++ + WL
Sbjct: 285 QDKVAKSPESRKKMFAWAMRVG------ERQFEA-----GQRRAKGSL----WL------ 323
Query: 223 AILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTES 281
++ W LA KLVY K+Q+ +G K GG +L +++ F+ AIG+ V GYG+TE+
Sbjct: 324 SLQWQ---LANKLVYSKLQAVLGGRLKFMPCGGAALDLNVGSFFHAIGIPVLCGYGMTET 380
Query: 282 SPVIAARRPTCNVL-----GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQG 336
+ + TCN L GS G P+ TEIK+ + +E+L VRG+ VM+G
Sbjct: 381 NATV-----TCNTLDNRVPGSNGQPLLETEIKL--GKDDEIL---------VRGATVMRG 424
Query: 337 YFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENV 396
Y+ P T A EDGWL TGD G + G L + R K+ + S G+ +
Sbjct: 425 YYNRPEDTAAAF-EDGWLKTGDAGRFDAN----------GNLFITDRIKELMKTSNGKYI 473
Query: 397 EPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASEL 452
P +E R I Q+ +I + A+IVP E + AK + + + EL
Sbjct: 474 APQRVEGTVGRCPFIEQVAIIADARNYVTALIVPAFESLEAWAKEKGLKYESSLEL 529
>gi|159900246|ref|YP_001546493.1| AMP-dependent synthetase/ligase [Herpetosiphon aurantiacus DSM 785]
gi|159893285|gb|ABX06365.1| AMP-dependent synthetase and ligase [Herpetosiphon aurantiacus DSM
785]
Length = 594
Score = 177 bits (450), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 140/444 (31%), Positives = 217/444 (48%), Gaps = 62/444 (13%)
Query: 54 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 113
+ I +D+AT VYTSGTTGNPKG ML H+ LL ++ ++ + + GD + LP H++
Sbjct: 174 QQIEPEDLATIVYTSGTTGNPKGAMLAHRALLGELTAIRTTMAMQAGDDDVLFLPAAHIF 233
Query: 114 ER---ACGYFIFSRGIEL-MYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTS 169
R CG G+ + +++ + +D+Q +P + SVP +YE ++S Q + S
Sbjct: 234 GRLQHMCG---VDNGLNTAIIESIKQVLEDVQAIKPTFFFSVPRMYEKIFSTAQARAEAS 290
Query: 170 SAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLH 229
+R+ A AL A R ++R + Q + + A +A
Sbjct: 291 PIRKRIFAWAL--------AIAR-----QMSRYKGQKAAVPAAFKLKYA----------- 326
Query: 230 LLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAAR 288
LA++LV+KK+++ +G + + ++GG L + I F+ GV + G+GLTE+S + A
Sbjct: 327 -LADRLVFKKVRALLGGNIRYAITGGAPLDIEILEFFNGAGVLLLEGWGLTETSAAVTAN 385
Query: 289 RPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQAL 348
RP LG+VG EIKI D G V VRG+ ++ GY+ NP T +AL
Sbjct: 386 RPDDYRLGTVGKVFPGNEIKIAD-----------DGEVLVRGNLILSGYYNNPQKTNEAL 434
Query: 349 DEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRS 408
DGW +TGDIG I G L + R KD ++ ++G+N+ P +E A S
Sbjct: 435 -IDGWFHTGDIGKI----------DADGFLSIVDRKKDLLITASGKNIAPQAVEAAFKNS 483
Query: 409 SLIRQIVVIGQDQRRPG--AIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELR 466
I Q V G RRP A+ D E V A R V DA+ K ++ + E++
Sbjct: 484 PYISQCAVFG--DRRPYLVALFTLDMEAVTAWANR-EHVPVDANLHKHPKLVAAIEHEVQ 540
Query: 467 KWTSKC-SF-QIGPIHVVDEPFTV 488
SF QI ++ E FT+
Sbjct: 541 TINPTLPSFEQIKAYEILPEDFTI 564
>gi|301310729|ref|ZP_07216668.1| putative long-chain-fatty-acid--CoA ligase [Bacteroides sp. 20_3]
gi|423336979|ref|ZP_17314726.1| hypothetical protein HMPREF1059_00678 [Parabacteroides distasonis
CL09T03C24]
gi|300832303|gb|EFK62934.1| putative long-chain-fatty-acid--CoA ligase [Bacteroides sp. 20_3]
gi|409239161|gb|EKN31947.1| hypothetical protein HMPREF1059_00678 [Parabacteroides distasonis
CL09T03C24]
Length = 633
Score = 177 bits (450), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 124/429 (28%), Positives = 215/429 (50%), Gaps = 54/429 (12%)
Query: 54 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 113
+++G+DD AT YTSGTT +PKGV+LTH+N + V ++ + L +LP H +
Sbjct: 173 QSLGNDDYATITYTSGTTADPKGVILTHRNYTANVEQALTCVDIDDTWRTLVILPLDHCF 232
Query: 114 ERACGYFIF-SRG-----IELMYTAVRNLKD---DLQRYQPHYMISVPLVYETLYSGIQK 164
G++IF S+G +++ T + LK+ +++ ++P+ ++SVP + + I++
Sbjct: 233 AHVVGFYIFMSKGASVATVQVGRTGMETLKNIPINIKEFKPYLILSVPALAKNFKKNIEQ 292
Query: 165 QIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAI 224
I + +RI + Y EG + +
Sbjct: 293 GIRARGKNAVRLFNLALRIGYIYNGDSDEEEG----------------------KGFRVL 330
Query: 225 LWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSP 283
L PL L +KL++ K++ G K + GG L + FY A+G+ + GYGL+E++P
Sbjct: 331 LKPLVRLFDKLLFAKVRENFGGELKFFIGGGALLDKDLQKFYYALGIPMYQGYGLSEATP 390
Query: 284 VIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSA 343
+I+ P + GS G + ++KI D + N VLP G KG + +RG VM GY+KNP++
Sbjct: 391 IISTNGPRRHTFGSSGVLVRPLDLKICDMDGN-VLPPGEKGEIVIRGENVMAGYWKNPAS 449
Query: 344 TKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEE 403
T + E GWL TGD+G++ G+L + GR K ++ S GE P +EE
Sbjct: 450 TADTVKE-GWLYTGDMGYMR-----------DGLLYVLGRFKSLLIGSDGEKYSPEGIEE 497
Query: 404 AALR-SSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHAD---ASELSKEKTIS 459
A + SS I Q+++ A++VP+KE + R + H + S+ +E+ I
Sbjct: 498 ALVEHSSCIDQLILYNNQSPYTTALLVPNKERL-----RKHLAHQNLDLTSDQGREEAIR 552
Query: 460 LLYGELRKW 468
++ ++ ++
Sbjct: 553 IIQRQIDRF 561
>gi|220936214|ref|YP_002515113.1| AMP-dependent synthetase and ligase [Thioalkalivibrio sulfidophilus
HL-EbGr7]
gi|219997524|gb|ACL74126.1| AMP-dependent synthetase and ligase [Thioalkalivibrio sulfidophilus
HL-EbGr7]
Length = 605
Score = 177 bits (450), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 140/437 (32%), Positives = 212/437 (48%), Gaps = 53/437 (12%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 118
D++AT VYTSGTTG PKGVML+H+N+L + D FLS LP H ER G
Sbjct: 184 DELATIVYTSGTTGKPKGVMLSHRNILFNAHASSRCADLNEQDLFLSFLPLSHTLERTAG 243
Query: 119 YFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 176
Y++ G + Y +++ L DDL +P +ISVP +YE +Y I + S ++
Sbjct: 244 YYMPMMVGAAVAYARSIQTLADDLATVRPTVLISVPRIYERVYGRINAGLKEKS----LL 299
Query: 177 ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLV 236
AR L ++ ++R +Q + W + L+A K++
Sbjct: 300 ARKLF-MTTVDVGWRR------FEHSQGRAG---------WHPKLLLWPLLEKLVASKVL 343
Query: 237 YKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLG 296
+ G + V GG LP I F+ +G+ V GYG+TESSPV++ RP NV
Sbjct: 344 AR----LGGRLRYAVCGGAPLPPPIARFFIGLGLPVFHGYGMTESSPVVSVNRPDDNVPA 399
Query: 297 SVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNT 356
S+G P+ E+KI G K + R VM GY+ N AT+ +D +GWL++
Sbjct: 400 SIGKPLPGVEVKI-----------GDKDELLTRSPSVMLGYWNNEEATRATIDSEGWLHS 448
Query: 357 GDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVV 416
GD + R G L + GR K+ IVL GE V P ++E A L Q++V
Sbjct: 449 GD---------KARMDETGH-LYITGRIKEIIVLGNGEKVPPADMEMAIALDPLFDQVMV 498
Query: 417 IGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK---EKTI-SLLYGELRKWTSKC 472
IG+ + AI+V + EE AK L + ++L+ EKT+ + + +L ++
Sbjct: 499 IGEGRPALAAIVVLNPEEWAALAKELDLDPESEADLNGRFLEKTLRTRIARQLHEFPGYA 558
Query: 473 SFQIGPIHVVDEPFTVN 489
Q+ + V EP+TV+
Sbjct: 559 --QVRKLIVTLEPWTVD 573
>gi|313125292|ref|YP_004035556.1| amp-forming long-chain acyl-CoA synthetase [Halogeometricum
borinquense DSM 11551]
gi|448287112|ref|ZP_21478328.1| amp-forming long-chain acyl-CoA synthetase [Halogeometricum
borinquense DSM 11551]
gi|312291657|gb|ADQ66117.1| AMP-forming long-chain acyl-CoA synthetase [Halogeometricum
borinquense DSM 11551]
gi|445572858|gb|ELY27388.1| amp-forming long-chain acyl-CoA synthetase [Halogeometricum
borinquense DSM 11551]
Length = 677
Score = 177 bits (450), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 129/412 (31%), Positives = 190/412 (46%), Gaps = 70/412 (16%)
Query: 61 IATYVYTSGTTGNPKGVMLTHKNLLHQIRSLY----------DIVPAENGDKFLSMLPPW 110
+A+ +YTSGTTG PKGV LTH N + Y D+ NG LS LP
Sbjct: 216 LASLIYTSGTTGQPKGVKLTHNNFRSNVNQCYKRFGPRPDKEDVPTLTNGMVTLSFLPLA 275
Query: 111 HVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFT 168
HV ER G+F+ F+ G + Y + L++D Q +P SVP VYE LY I+ +
Sbjct: 276 HVLERLAGHFLMFASGACVAYAESPDTLREDFQLVRPTVGTSVPRVYEKLYDAIRSEASK 335
Query: 169 SSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPL 228
S +R+ +A + +E P IL
Sbjct: 336 SPTKKRI-------FEWAVDVGREYHE-------SDSPG---------------VILSAK 366
Query: 229 HLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAA 287
H LA+KLV+ +++ A+G + +SGGGSL + Y +G+ + GYGLTE+SPVIA
Sbjct: 367 HALADKLVFDQVREALGGRIEFFISGGGSLSAELCALYHGMGLPILEGYGLTETSPVIAV 426
Query: 288 RRPTCNVLGSVGHPINHTEIKIVDAETNEVL--PAGSKGIVKVRGSQVMQGYFKNPSATK 345
P +G++G P+ E+K+ +V G G + V+G V +GY+ P T
Sbjct: 427 NPPEEPKIGTIGTPVVDVEVKLDKTVVGDVTGDAGGDVGELLVKGPNVTEGYWNRPEETA 486
Query: 346 QALDED----------------GWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIV 389
A +D GW TGD+ + P G + RAK +V
Sbjct: 487 AAFTDDVPSDANGESESEGDSGGWFRTGDVVELRPD----------GYIAFRERAKQILV 536
Query: 390 LSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKR 441
LSTG+NV P +E++ S ++ Q +V+G ++ A+IVP EE+ A R
Sbjct: 537 LSTGKNVAPGPIEDSFASSDVVEQCMVLGDGRKFVSALIVPSFEEIREWADR 588
>gi|453382146|dbj|GAC83353.1| putative fatty-acid--CoA ligase [Gordonia paraffinivorans NBRC
108238]
Length = 612
Score = 177 bits (450), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 128/427 (29%), Positives = 210/427 (49%), Gaps = 50/427 (11%)
Query: 53 YETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHV 112
++ + DD+AT +YTSGTTG PKGV +TH+N++ ++ SL DIV A D+ +S LP H+
Sbjct: 172 WQAVEPDDLATLIYTSGTTGPPKGVEITHRNIIAELASLADIVDAGFDDRAISYLPAAHI 231
Query: 113 YERACGYFI-FSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSS 170
+R + RGI+L R + L +P + VP V++ + +GI+
Sbjct: 232 ADRVSSHAANMVRGIQLTTVPDPREIAAALPEVRPTFFFGVPRVWQKIRAGIEA------ 285
Query: 171 AARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHL 230
R+ + K+ G+ L K +A R + + H
Sbjct: 286 -----------RLGEETSPVKKALAGWALGMGTKAADARLA------GRELGVLDRIGHE 328
Query: 231 LAEKLVYKKIQSAIGISKAGVSGGGS--LPMHIDLFYEAIGVKVQVGYGLTESSPVIAAR 288
LA++L+ K+++A+G+ + +G G+ +P+ + ++ +G+ V +G++E++ V
Sbjct: 329 LADRLILHKVRAALGLDEVDFAGSGAAAIPLEVLKYFLGLGLPVLEVWGMSETTGVSTMT 388
Query: 289 RPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQAL 348
P +G+VG PI E+K+ AE E+L VRG VM GY K P T + +
Sbjct: 389 TPDDLKIGTVGKPIRGIEVKL--AEDGELL---------VRGPVVMNGYRKQPDKTAETI 437
Query: 349 DEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALR- 407
D DGWL TGDI I G + + R K+ I+ +G+N+ P +E
Sbjct: 438 DPDGWLATGDIATI----------DADGHVTIVDRKKELIINESGKNMSPTNIENTMKAV 487
Query: 408 SSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTI-SLLYGELR 466
SSLI Q+V IG + A++V D E V AKRL++ +ELS I + G +R
Sbjct: 488 SSLIAQVVAIGDGEPYVSALVVLDPEAVEAYAKRLNLGQGGFAELSSHPAIVEEITGAIR 547
Query: 467 KWTSKCS 473
+ ++ S
Sbjct: 548 EGNTRLS 554
>gi|397689621|ref|YP_006526875.1| long-chain-fatty-acid-CoA ligase [Melioribacter roseus P3M]
gi|395811113|gb|AFN73862.1| long-chain-fatty-acid-CoA ligase [Melioribacter roseus P3M]
Length = 636
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 122/434 (28%), Positives = 214/434 (49%), Gaps = 48/434 (11%)
Query: 52 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWH 111
+ +++ +D A YTSGTT +PKG++L+H+N + ++P L +LP H
Sbjct: 169 RMQSVKENDYANICYTSGTTADPKGIVLSHRNYTANVEQATSLLPIPEWYTTLLILPWDH 228
Query: 112 VYERACG-YFIFSRGIELM--------YTAVRNLKDDLQRYQPHYMISVPLVYETLYSGI 162
+ G Y + G + ++N+ +++ +P +++SVP + + I
Sbjct: 229 AFAHTAGIYTLMYNGASMAAVETGRTPLETLKNIPKNIKEIKPTFLLSVPALAKNFRKNI 288
Query: 163 QKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIIC 222
+K I + + +++++ Y A EG+ +++
Sbjct: 289 EKGIREKGKRIEQLFNSALKLAYNYNA-----EGWNRGNGKRK----------------- 326
Query: 223 AILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSL-PMHIDLFYEAIGVKVQVGYGLTES 281
+L PL+ L +K+++ KI+ G GGG+L + + F+ AIG+ + GYGLTE+
Sbjct: 327 -LLKPLYKLYDKILFSKIRENFGGRLEFFIGGGALLDIELQRFFYAIGIPMFQGYGLTEA 385
Query: 282 SPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNP 341
+P+I+A P + LGS G +++ E+KI D+ +E LPAG KG + VRG VM GY+KN
Sbjct: 386 APIISANVPAKHKLGSSGRIVDNLEVKICDSNGSE-LPAGQKGEIVVRGENVMVGYWKNE 444
Query: 342 SATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLEL 401
AT + + +DGWL +GD+G++ G L + GR K ++ S GE P +
Sbjct: 445 KATAETI-KDGWLYSGDLGYLDED----------GFLYVLGRFKSLLIASDGEKYSPEGI 493
Query: 402 EEAALRSS-LIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISL 460
EEA +S I Q+++ A+IVP+KE++ ++ H SE + I L
Sbjct: 494 EEALTENSKFIEQVMLYNNQSPYTIALIVPNKEQIKRFLDENNLSH--KSEEGQNAVIKL 551
Query: 461 LYGELRKWTSKCSF 474
+ E+ K+ F
Sbjct: 552 IDEEISKFKQGGQF 565
>gi|146291172|ref|YP_001181596.1| AMP-dependent synthetase and ligase [Shewanella putrefaciens CN-32]
gi|145562862|gb|ABP73797.1| AMP-dependent synthetase and ligase [Shewanella putrefaciens CN-32]
Length = 598
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 128/416 (30%), Positives = 206/416 (49%), Gaps = 58/416 (13%)
Query: 44 SNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKF 103
+ +A + + E DD+ T +YTSGTTG+PKGVML ++N+ IR + +GD
Sbjct: 165 TQEAELNQRLEAANLDDLLTLIYTSGTTGDPKGVMLDYRNMASTIRQHDQKLAFSSGDVS 224
Query: 104 LSMLPPWHVYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLYSGI 162
L+ LP HV+ER+ +++ RG +Y + +K+ + +PH + VP E +YS +
Sbjct: 225 LAFLPLSHVFERSWSFYVLCRGGHNVYLQNTQRVKEAISAVRPHTLCVVPRFLEKVYSAV 284
Query: 163 QKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIIC 222
Q ++ S +R+ + +R+ +R +E + + + + S WL
Sbjct: 285 QDKVAKSPESRKKMFAWAMRVG------ERQFE---VGQRRAKGSL------WL------ 323
Query: 223 AILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTES 281
++ W LA KLVY K+Q+ +G K GG +L +++ F+ AIG+ V GYG+TE+
Sbjct: 324 SLQWQ---LANKLVYSKLQAVLGGRLKFMPCGGAALDLNVGSFFHAIGIPVLCGYGMTET 380
Query: 282 SPVIAARRPTCNVL-----GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQG 336
+ + TCN L GS G P+ TEIK+ + +E+L VRG+ VM+G
Sbjct: 381 NATV-----TCNTLDNRVPGSNGQPLLETEIKL--GKDDEIL---------VRGATVMRG 424
Query: 337 YFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENV 396
Y+ P T A EDGWL TGD G + G L + R K+ + S G+ +
Sbjct: 425 YYNRPEDTAAAF-EDGWLKTGDAGRFDAN----------GNLFITDRIKELMKTSNGKYI 473
Query: 397 EPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASEL 452
P +E R I Q+ +I + A+IVP E + AK + + + EL
Sbjct: 474 APQRVEGTVGRCPFIEQVAIIADARNYVTALIVPAFESLEAWAKEKGLKYESSLEL 529
>gi|448409765|ref|ZP_21574892.1| long-chain fatty-acid-CoA ligase [Halosimplex carlsbadense 2-9-1]
gi|445672536|gb|ELZ25108.1| long-chain fatty-acid-CoA ligase [Halosimplex carlsbadense 2-9-1]
Length = 663
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 131/423 (30%), Positives = 208/423 (49%), Gaps = 56/423 (13%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNL---LHQIRSLYDIVPA-------ENGDKFLSMLP 108
DD+A+ +YTSGTTG PKGV LTH+N ++Q R P ++ + +S LP
Sbjct: 216 DDLASIIYTSGTTGQPKGVRLTHRNFRSNVNQCRKRMGPRPDKGETPVLDDHSRTISFLP 275
Query: 109 PWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQI 166
HV+ER G+F+ F+ G + Y + L +DLQ P SVP VYE ++ +++Q
Sbjct: 276 LAHVFERLAGHFLMFASGATVGYAESPDTLPEDLQLLSPTTGASVPRVYERIFDNMREQA 335
Query: 167 FTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILW 226
S+A R+ A+ + R D+ A A+L
Sbjct: 336 SDSAAKERIFEWAV-----------------GVAR------------DYARAEDPGAVLG 366
Query: 227 PLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVI 285
LA++LVY ++ +G + VSGGGSL + + +G+ + GYGLTE++PV+
Sbjct: 367 AKRSLADRLVYSTVKERMGGEIEFLVSGGGSLSQELAEMFLGMGIPIVEGYGLTETAPVL 426
Query: 286 AARRPTCNVLGSVGHPINHTEIKIVDAET-NEVLP--AGSKGIVKVRGSQVMQGYFKNPS 342
+ P G++G P+ + ++ ++ ++ P AG G ++V G V GY+ P+
Sbjct: 427 SVNPPEAIRPGTMGPPVTDVDARVDESAVGDDQFPTAAGPVGELEVAGPNVTDGYWNMPA 486
Query: 343 ATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELE 402
T EDG+ TGDI I P G L + R K IVLSTG+NV P +E
Sbjct: 487 ETDATFTEDGYFVTGDIVEITPE----------GFLRYKDRLKQLIVLSTGKNVAPEPIE 536
Query: 403 EAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI-VHADASELSKEKTISLL 461
+ S + Q++V+G +++ GA++VP+ E V A R I + AD + ++ +
Sbjct: 537 DRFATSDRVDQVMVVGDERKFVGAVVVPNFEAVRRWADREGIDLPADDEAVCADERVREW 596
Query: 462 YGE 464
GE
Sbjct: 597 VGE 599
>gi|371775800|ref|ZP_09482122.1| long chain fatty-acid CoA ligase [Anaerophaga sp. HS1]
Length = 606
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 141/483 (29%), Positives = 227/483 (46%), Gaps = 66/483 (13%)
Query: 19 VEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYK------YETIGSDDIATYVYTSGTTG 72
++++ F+Y E I E K + DA+ YK E+I DD+ T +YTSGTTG
Sbjct: 130 LKKVYTFNYYEGIPHWSEISK---EGEDAKMKYKEKLQKISESIKPDDLLTIIYTSGTTG 186
Query: 73 NPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA 132
PKGVML+H+N+L + ++++ P D+ LS LP HVYER Y +G + Y
Sbjct: 187 LPKGVMLSHRNILSNVEGVFNLYPLGPDDRILSFLPLCHVYERMVNYLFQWKGCGIYYAE 246
Query: 133 -VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFK 191
+ + +L + ++VP V E +Y +I + R + R + ++
Sbjct: 247 NLGTIAQNLAEVRASAFVTVPRVMERIYD----RIVSKGEDLRGIKRRIFFMALKIGERY 302
Query: 192 RIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAG 250
R+ N K W R LW +A KLV+ K Q G K
Sbjct: 303 RV--------NGKHGP-------WYGLR-----LW----IARKLVFAKWQQTFGGKLKFV 338
Query: 251 VSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAAR---RPTCNVLGSVGHPINHTEI 307
+SGG +L + + A G+ + GYG+TE+SPVIAA P ++G+VG + + ++
Sbjct: 339 ISGGAALQPRLSRLFFAAGIPLMEGYGMTETSPVIAANHLSEPNSLLIGTVGPVLKNIQV 398
Query: 308 KIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHS 367
KI D G + V+G VM GY+K+ T + LD+DGWL+TGDIG
Sbjct: 399 KIDD-----------DGEILVKGPSVMMGYYKDKKNTAEVLDKDGWLHTGDIG------- 440
Query: 368 RGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAI 427
+ G L + R K+ S+G+ + P +E S I Q +V+G++++ A+
Sbjct: 441 ---TFEKGKFLKITDRKKEMFKTSSGKYIAPQAIENILKESFFIEQAMVVGENEKFASAL 497
Query: 428 IVPDKEEVLMAAKRLSIVHADASELSKE-KTISLLYGELRKWTSKC--SFQIGPIHVVDE 484
I P+ E + + A I D EL + + + E+ K+ + + QI +V E
Sbjct: 498 ISPNFEYLHVWANDRHIHFRDNQELIRHPDVLKVFQKEVEKYNKQLGRTEQIKRFRLVHE 557
Query: 485 PFT 487
++
Sbjct: 558 EWS 560
>gi|406910414|gb|EKD50442.1| hypothetical protein ACD_62C00542G0002 [uncultured bacterium]
Length = 595
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 121/400 (30%), Positives = 190/400 (47%), Gaps = 46/400 (11%)
Query: 55 TIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYE 114
++ D A++VYTSGTTG PKG +LTH N + + + I P L LP H+
Sbjct: 171 SLNLDHDASFVYTSGTTGEPKGAILTHGNFVAEAKGALAICPIGEDFTGLLFLPLAHILG 230
Query: 115 RACGYFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 173
R +F G Y ++ L D++ +PH+M+SVP ++E +++ + + S +
Sbjct: 231 RVTQFFHIHVGHTQCYAESIDRLIDNIATVKPHFMVSVPRIFEKIHARTLQNVENSPPLK 290
Query: 174 RVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAE 233
+ + R ++I + +R+ KQP +C L + LA
Sbjct: 291 QHIFRWALKIGEQRS--QRLL--------TKQP------------LPVCMKLK--YFLAH 326
Query: 234 KLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTC 292
LV+KK+ +G + +SGG L + LF+ A G + GYGLTE++ ++ R
Sbjct: 327 HLVFKKLHDKMGGRIRFFISGGAPLSADLALFFHAFGFTILEGYGLTETTAGLSFNRSHF 386
Query: 293 NVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDG 352
G+VG PI E + G + VRG V +GYF NP AT++A+DE+G
Sbjct: 387 IKFGTVGQPI----------EDAVAVKIAGDGEICVRGKIVFKGYFNNPQATREAIDEEG 436
Query: 353 WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIR 412
W +TGDIG G L + R KD IV + G+N+ P +E + I
Sbjct: 437 WFHTGDIGEF----------DTDGFLKITDRKKDIIVTAGGKNIAPQSIENHMITDPFIS 486
Query: 413 QIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASEL 452
Q +V G ++ A++V D+++VL AK I A EL
Sbjct: 487 QFIVHGDKRKFLSALVVLDRDQVLRFAKEHDIPFASYEEL 526
>gi|255692993|ref|ZP_05416668.1| putative long-chain-fatty-acid--CoA ligase [Bacteroides finegoldii
DSM 17565]
gi|260621305|gb|EEX44176.1| AMP-binding enzyme [Bacteroides finegoldii DSM 17565]
Length = 602
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 129/438 (29%), Positives = 210/438 (47%), Gaps = 54/438 (12%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYD-IVPAENGDKFLSMLPPWHVYERAC 117
DD+A +YTSGTTG PKGVML H L Q R+ D + + D ++ LP HV+E+A
Sbjct: 180 DDLANILYTSGTTGEPKGVMLHHSCYLEQFRTHDDRLTTMSDKDVSMNFLPLTHVFEKAW 239
Query: 118 GYFIFSRGIEL-MYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 176
Y +G+++ + +++ ++ +P M SVP +E +Y+G+Q++I ++ ++ +
Sbjct: 240 CYLCIHKGVQICINLRPADIQTTIKEIRPTLMCSVPRFWEKVYAGVQEKINETTGMKKAL 299
Query: 177 ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLV 236
IR+ +I+ L + + P ++ + + + EK +
Sbjct: 300 MLDAIRVG-------KIHNLDYLRKGKTPP-------------VMNQLKYKFY---EKTI 336
Query: 237 YKKIQSAIGISKAGV--SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNV 294
Y ++ IGI + G ++P I+ F ++G+ + VGYGLTES+ ++ P
Sbjct: 337 YSLLKKTIGIENGNFFPTAGAAVPDEINEFVHSVGINMVVGYGLTESTATVSCTLPVGYD 396
Query: 295 LGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWL 354
+GSVG + E+KI E NE+L +RG + +GY+K AT A+D DGW
Sbjct: 397 IGSVGVVLPGVEVKI--GEDNEIL---------LRGKTITKGYYKKAEATAAAIDSDGWF 445
Query: 355 NTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQI 414
+TGD G+ G L L R KD S G+ + P LE + I QI
Sbjct: 446 HTGDAGYFK-----------NGQLFLTERIKDLFKTSNGKYIAPQALETKLVIDRYIDQI 494
Query: 415 VVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSKCSF 474
+I ++ A+IVP V AK I + D SEL + I L+ R T + F
Sbjct: 495 AIIADQRKFVSALIVPVYGYVKEYAKEKGIEYKDMSELLQHPKIVGLF-RARIETLQQQF 553
Query: 475 ----QIGPIHVVDEPFTV 488
QI ++ EPF++
Sbjct: 554 AHYEQIKRFTLLPEPFSM 571
>gi|452963530|gb|EME68596.1| AMP-dependent synthetase and ligase [Magnetospirillum sp. SO-1]
Length = 608
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 135/384 (35%), Positives = 189/384 (49%), Gaps = 60/384 (15%)
Query: 60 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPA---ENGDKFLSMLPPWHVYERA 116
D A +YTSGT G PKGVML+H +L D++ EN + FLS LP H YE
Sbjct: 182 DTACLIYTSGTGGVPKGVMLSHGAILCNCMGATDVLRELGLEN-EVFLSFLPLSHAYEHT 240
Query: 117 CG-YFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARR 174
G +F S G E+ Y + L ++ P M +VP +YET+ + I K + S RR
Sbjct: 241 AGLHFPISIGAEIRYAEGIEMLAANMAEVSPTIMTAVPRLYETMRTRILKGLARVSPLRR 300
Query: 175 VVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEK 234
+ A + + +R+ L AR+ +L E+
Sbjct: 301 RLFMAALDLGTRRLKGQRL---------------------GLIARLADLVL-------ER 332
Query: 235 LVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCN 293
LV K+++ G KA VSGG LP + F+ A+GV++ GYG TE++PVIA RP N
Sbjct: 333 LVRDKVRARFGGRLKAFVSGGAPLPYEVGAFFVALGVRILQGYGQTEAAPVIAVNRPGHN 392
Query: 294 VLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGW 353
L +VG + E++I G + VRG VMQGY+++ AT QA+D +GW
Sbjct: 393 RLETVGPAMPGVELRIA-----------GDGEILVRGELVMQGYWRDAPATAQAIDSEGW 441
Query: 354 LNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQ 413
L+TGDIG + P G L + R KD IV S G+NV P +E + I Q
Sbjct: 442 LHTGDIGEVDPD----------GCLRITDRKKDIIVNSGGDNVAPQRIESFLTLEAEIAQ 491
Query: 414 IVVIGQDQRRPG--AIIVPDKEEV 435
+V G RRP A+IVPD++ V
Sbjct: 492 AMVYG--DRRPHLVALIVPDRDWV 513
>gi|262382159|ref|ZP_06075297.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
gi|262297336|gb|EEY85266.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
Length = 633
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 124/429 (28%), Positives = 214/429 (49%), Gaps = 54/429 (12%)
Query: 54 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 113
+++G+DD AT YTSGTT +PKGV+LTH+N + V ++ + L +LP H +
Sbjct: 173 QSLGNDDYATITYTSGTTADPKGVILTHRNYTANVEQALTCVDIDDTWRTLVILPLDHCF 232
Query: 114 ERACGYFIF-SRG-----IELMYTAVRNLKD---DLQRYQPHYMISVPLVYETLYSGIQK 164
G++IF S+G +++ T + LK+ +++ ++P+ ++SVP + + I++
Sbjct: 233 AHVVGFYIFMSKGASVATVQVGRTGMETLKNIPINIKEFKPYLILSVPALAKNFKKNIEQ 292
Query: 165 QIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAI 224
I + +RI + Y EG + +
Sbjct: 293 GIRARGKNAVRLFNLALRIGYIYNGDSDEEEG----------------------KGFRVL 330
Query: 225 LWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSP 283
L PL L +KL++ K++ G K + GG L + FY A+G+ + GYGL+E++P
Sbjct: 331 LKPLVRLFDKLLFAKVRENFGGELKFFIGGGALLDKDLQKFYYALGIPMYQGYGLSEATP 390
Query: 284 VIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSA 343
+I+ P + GS G + ++KI D + N VLP G KG + +RG VM GY+KNP++
Sbjct: 391 IISTNGPRRHTFGSSGVLVRPLDLKICDMDGN-VLPPGEKGEIVIRGENVMAGYWKNPAS 449
Query: 344 TKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEE 403
T + E GWL TGD+G++ G+L + GR K ++ S GE P +EE
Sbjct: 450 TADTVKE-GWLYTGDMGYMR-----------DGLLYVLGRFKSLLIGSDGEKYSPEGIEE 497
Query: 404 AALR-SSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHAD---ASELSKEKTIS 459
A + SS I Q+++ A++VP KE + R + H + S+ +E+ I
Sbjct: 498 ALVEHSSCIDQLILYNNQSPYTTALLVPSKERL-----RKHLAHQNLDLTSDQGREEAIR 552
Query: 460 LLYGELRKW 468
++ ++ ++
Sbjct: 553 IIQRQIDRF 561
>gi|299531038|ref|ZP_07044451.1| long-chain-fatty-acid--CoA ligase [Comamonas testosteroni S44]
gi|298720995|gb|EFI61939.1| long-chain-fatty-acid--CoA ligase [Comamonas testosteroni S44]
Length = 649
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 131/434 (30%), Positives = 214/434 (49%), Gaps = 43/434 (9%)
Query: 60 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGY 119
++A VYTSGTTG PKGVMLTH N++ + ++ V A D FLS LP H +ER GY
Sbjct: 216 ELAGIVYTSGTTGKPKGVMLTHDNVVSDLHAVMQRVKAFPEDVFLSFLPLSHTFERTAGY 275
Query: 120 FI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 177
++ + G + Y +V L D+++ +P +ISVP +YE +Y+ +Q+ + +S ++
Sbjct: 276 YLAVATGSCVAYARSVAQLAQDMKQVKPTVLISVPRIYERVYAKVQESLASSPFKHKLFD 335
Query: 178 RALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVY 237
A+ + ++ A + + G + + + S+ AL WL +++ L L +L
Sbjct: 336 AAVNKGWKSFCAHQGMPLG---EQPEAKASWASALPGWLLRKLVAQPL--LAQFGGRL-- 388
Query: 238 KKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 297
+ VSGG L I + +G+ + GYG+TE++PV++A N +
Sbjct: 389 ----------RVAVSGGAPLSPTIARTFLGLGLPMVQGYGMTETAPVVSANGLDDNWPDT 438
Query: 298 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 357
VGH + E++I D + ++V G VM+GY+ P T +A DGWL TG
Sbjct: 439 VGHVLPGIEVRIGDDQE-----------LQVSGPVVMRGYWNRPEDTAKAFTADGWLRTG 487
Query: 358 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 417
D I GR R ++GR K+ IV STGE V P ++E+A L L Q+ V+
Sbjct: 488 DQASI----ENGRIR-------IKGRIKEIIVTSTGEKVPPNDVEQAILVDPLFEQVFVV 536
Query: 418 GQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSKCSFQIG 477
G+D+ I V + E M A+ + + D S L + + T +
Sbjct: 537 GEDRPFIACIAVVGQVEWEMLARSVGLNPNDGSSLQHAAAEREALARIERQTRSFARYAV 596
Query: 478 P--IHVVDEPFTVN 489
P IH+V + + ++
Sbjct: 597 PRAIHLVRDSWNID 610
>gi|303256261|ref|ZP_07342277.1| AMP-dependent synthetase and ligase [Burkholderiales bacterium
1_1_47]
gi|330998956|ref|ZP_08322681.1| AMP-binding enzyme [Parasutterella excrementihominis YIT 11859]
gi|302860990|gb|EFL84065.1| AMP-dependent synthetase and ligase [Burkholderiales bacterium
1_1_47]
gi|329575698|gb|EGG57224.1| AMP-binding enzyme [Parasutterella excrementihominis YIT 11859]
Length = 616
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 116/363 (31%), Positives = 181/363 (49%), Gaps = 44/363 (12%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 118
DD+A VYTSGTTG PKGVMLTHKN+ +RS V E GD FLS LP H++ER G
Sbjct: 187 DDLACIVYTSGTTGRPKGVMLTHKNITSNVRSTLAHVKPEIGDIFLSFLPLSHMFERTAG 246
Query: 119 YFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 176
Y++ + G +++ +++ L +D + +P+ +ISVP VYE +Y+ + +
Sbjct: 247 YYLALATGSTIVFNRSLQYLAEDFKIAKPNVLISVPRVYERIYAKLNDAL---------A 297
Query: 177 ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLV 236
+ I+ + + A ++ FC + K + L ++ K +
Sbjct: 298 KKGKIQAALFHMAVNAGWQNFCKKNSIKTAGSQGLMFGGL-----------VNATVGKKI 346
Query: 237 YKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVL 295
+K++S G + +SGG SL + +G+ V GYG+TE+SP+I+ T N
Sbjct: 347 SEKLKSQFGGRLRVAISGGASLNPEAAKVFCGLGLPVIQGYGMTETSPIISGNNVTDNDP 406
Query: 296 GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLN 355
+VG + I++ G + ++++G VM+GY+ TK A EDGWL
Sbjct: 407 ATVGRALKDVSIRL-----------GEREEIQIKGDLVMKGYWDREKDTKNAFTEDGWLK 455
Query: 356 TGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIV 415
TGD G + GR L + GR K+ IV STGE + P+++E A L RQ
Sbjct: 456 TGDQG---AYDGEGR-------LKIVGRIKEIIVTSTGEKISPVDIESALETIPLFRQTY 505
Query: 416 VIG 418
+G
Sbjct: 506 AVG 508
>gi|269956645|ref|YP_003326434.1| AMP-dependent synthetase and ligase [Xylanimonas cellulosilytica
DSM 15894]
gi|269305326|gb|ACZ30876.1| AMP-dependent synthetase and ligase [Xylanimonas cellulosilytica
DSM 15894]
Length = 622
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 125/397 (31%), Positives = 194/397 (48%), Gaps = 53/397 (13%)
Query: 42 SDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLH-QIRSLYDIVPAENG 100
+D DA + G+DD+AT +YTSGTTG PKG LTH N + ++ ++ NG
Sbjct: 181 ADVADAEIERRRRLAGADDLATIIYTSGTTGRPKGAELTHGNFTTLALNTVAEVPEVFNG 240
Query: 101 -DKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETL 158
+ + LP HV+ R + G L ++ ++NL DL ++P Y++ VP ++E +
Sbjct: 241 MGRTIIFLPLAHVFARFVEVVAVAGGSVLGHSPDIKNLTKDLAAFRPTYLLGVPRIFEKV 300
Query: 159 YSGIQKQIFTSSAARRVVARALIRISFAYT-AFKRIYEGFCLTRNQKQPSYLVALIDWLW 217
Y+ ++ SSAA + AR + A A+ R + ++ PS LW
Sbjct: 301 YNTAEQ----SSAAEK--ARGYFNWATAVAIAYSRALD------TERGPS--------LW 340
Query: 218 ARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGY 276
+ L A+ LVY K++ +G K VSGGG L + FY IG+ + GY
Sbjct: 341 LKF-------QRLFADGLVYSKLRDKLGGRVKFAVSGGGPLGERLGHFYRGIGLHIIEGY 393
Query: 277 GLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQG 336
GLTE++ + RP +GSVG + + I D G + ++G + +G
Sbjct: 394 GLTETTAPTSVNRPGATRVGSVGQMLPGCSVSIAD-----------DGEILLKGPHLFRG 442
Query: 337 YFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENV 396
Y +NP AT A DEDGW TGD+G + G + + GR K+ IV + G+NV
Sbjct: 443 YHRNPEATAAAFDEDGWFRTGDLGKVDDE----------GFVHITGRKKEIIVTAGGKNV 492
Query: 397 EPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 433
P LE+ +L+ Q VV+G ++ GA++ D E
Sbjct: 493 APAVLEDRVRAHALVSQCVVVGDNRPFIGALVTLDAE 529
>gi|119512748|ref|ZP_01631819.1| AMP-dependent synthetase and ligase [Nodularia spumigena CCY9414]
gi|119462616|gb|EAW43582.1| AMP-dependent synthetase and ligase [Nodularia spumigena CCY9414]
Length = 392
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 96/241 (39%), Positives = 139/241 (57%), Gaps = 27/241 (11%)
Query: 22 IPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTH 81
+ V ++ +I+++G S + FS R + +AT VYTSGTTG PK ML+H
Sbjct: 166 LKVLNFSQIMEIG--SNQTFSPVEQTR----------ESLATLVYTSGTTGQPKATMLSH 213
Query: 82 KNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQ 141
NLLHQ+ SL +V E GD+ LS+LP WH+YER YF FS+G L+YT +R+ K DL+
Sbjct: 214 GNLLHQVSSLAVVVQLEAGDRVLSILPTWHIYERVIEYFAFSQGCTLIYTNLRHFKQDLK 273
Query: 142 RYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTR 201
+P Y +SVP + E+++ + KQ SA +R + ++ +S Y +RI L
Sbjct: 274 VQKPQYFVSVPRLLESIHDEVHKQFRQESAQKRRLINYMLAMSDRYIRARRIVHRLSL-- 331
Query: 202 NQKQPSYLVALIDWLW----ARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGS 256
Q+ PS +W AR AILWP+H LA++L+YKK++ IG K + GGGS
Sbjct: 332 EQQNPS--------MWQRQRARTQTAILWPIHALADRLIYKKVREQIGAELKQTICGGGS 383
Query: 257 L 257
L
Sbjct: 384 L 384
>gi|429753318|ref|ZP_19286127.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 326 str. F0382]
gi|429173984|gb|EKY15489.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 326 str. F0382]
Length = 636
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 131/414 (31%), Positives = 212/414 (51%), Gaps = 49/414 (11%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQ-IRSLYDIVPAENGDKFLSMLPPWHVYERAC 117
DD+ T +YTSGTTG PKGVML+++NL Q I + +N D L+ LP HV+ERA
Sbjct: 217 DDLFTIIYTSGTTGEPKGVMLSYENLAFQMIGHTERLSTVDNTDSSLAFLPLSHVFERAW 276
Query: 118 GYFIFSRGIELMYTAVRNL-KDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 176
+F + + + Y NL ++ L + +P M +VP YE +++ + + SS V
Sbjct: 277 TFFCLYKAVTVYYLDDTNLVREALAQVRPTLMCAVPRFYEKIFATVHDKADASS----FV 332
Query: 177 ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLV 236
R L R++ A KR+ L K+PS IL + L +KLV
Sbjct: 333 KRKLFRLAIA--TGKRV---LALREQGKKPSL---------------ILQKAYNLFDKLV 372
Query: 237 YKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVL 295
YKK++ A+G K GG +L I F+++IG+ +++GYG+TE+ I+
Sbjct: 373 YKKLKEALGGRIKFMPCGGANLEPSIGRFFQSIGINLKLGYGMTETVATISCWGDNRINP 432
Query: 296 GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLN 355
SVG + + +++I E NE+L V+G VM+GY+KNP T + DG+L
Sbjct: 433 QSVGEVMPNVQVRI--GEDNEIL---------VKGGMVMKGYYKNPEETAKVFTPDGYLR 481
Query: 356 TGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIV 415
TGD G + +++ L + R K+ + S G+ + P +E + +LI QI
Sbjct: 482 TGDAGNLDGNNN----------LFITERLKELMKTSNGKYIAPQMIEGKVGKYNLIEQIA 531
Query: 416 VIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE-KTISLLYGELRKW 468
VI ++ A+IVP+ E + A K L+I + + ++L K + I + +L+K+
Sbjct: 532 VIADGKKFVSALIVPNFEMLSQALKDLNIKYKNTADLIKHSQVIEYIGKQLQKF 585
>gi|262404795|ref|ZP_06081350.1| long-chain-fatty-acid--CoA ligase [Vibrio sp. RC586]
gi|262349827|gb|EEY98965.1| long-chain-fatty-acid--CoA ligase [Vibrio sp. RC586]
Length = 601
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 135/435 (31%), Positives = 208/435 (47%), Gaps = 55/435 (12%)
Query: 54 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 113
E DD+ T +YTSGTTG PKGVML ++N+ Q+ + D L LP HV+
Sbjct: 173 EQANFDDLFTLIYTSGTTGTPKGVMLDYRNIGSQLEGHDQRLNLNEEDVSLCFLPLSHVF 232
Query: 114 ERACGYFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAA 172
ERA ++ +G Y V +++D L +P M +VP YE ++S I +++ +
Sbjct: 233 ERAWTAYVLYKGATNCYLHDVAHVRDALGEVRPTVMCAVPRFYEKIFSAIHEKVAKAPFI 292
Query: 173 RRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLA 232
R+V+ F + C + Q QPS+L+A H LA
Sbjct: 293 RKVL--------FTWAVNMGAKMAVC-RQQQHQPSWLLA---------------QSHQLA 328
Query: 233 EKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPT 291
+KLV K+++ +G + GG L I F+ AIG+ V++GYG+TE++ I+
Sbjct: 329 DKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTATISCWDDH 388
Query: 292 CNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDED 351
C S+G + ++KI E NE+L VRG VM+GY+K T ++ DE
Sbjct: 389 CFNPDSIGLSMPGAQVKI--GENNEIL---------VRGPMVMRGYYKLEKETSESFDEH 437
Query: 352 GWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLI 411
G+L TGD G I + G L + R K+ + S G+ + P +E A + I
Sbjct: 438 GFLKTGDAGHIDEN----------GNLFITDRIKELMKTSGGKYIAPQVIEGAIGKDHFI 487
Query: 412 RQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLLYG 463
QI VI ++ A+IVP + + + AK L+I + D EL K EK ++ L
Sbjct: 488 EQIAVIADTRKFVSALIVPCFDSLEVYAKELNIKYQDRLELLKHSQVLEMFEKRVNELQK 547
Query: 464 ELRKWTSKCSFQIGP 478
EL K+ F++ P
Sbjct: 548 ELAKFEQVKKFKLLP 562
>gi|379007028|ref|YP_005256479.1| long-chain-fatty-acid--CoA ligase [Sulfobacillus acidophilus DSM
10332]
gi|361053290|gb|AEW04807.1| Long-chain-fatty-acid--CoA ligase [Sulfobacillus acidophilus DSM
10332]
Length = 589
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 139/440 (31%), Positives = 209/440 (47%), Gaps = 60/440 (13%)
Query: 60 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDI---VPA---ENGDKFLSMLPPWHVY 113
D+AT VYTSGTTG PKGVMLTH NLL I ++ + PA D LS LP H+
Sbjct: 157 DLATIVYTSGTTGLPKGVMLTHGNLLANIEAILALRATSPAFTVTREDVALSFLPLSHIL 216
Query: 114 ERACGYFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAA 172
ER S+G+ + Y + + +L+ +P M++VP ++E LY+ I Q+ +
Sbjct: 217 ERMVHLLFLSQGVTIAYAESPERIPANLREIRPTVMVAVPRIFEKLYAAILDQMTRAGGV 276
Query: 173 RRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLA 232
+R + IR R YE F W W W A
Sbjct: 277 KRRLFDWAIRQGI------RRYERF-----------------WQWGGSRPVWGW-ADRWA 312
Query: 233 EKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPT 291
++LVY++I+ A+G + +SGG +L I F+ A+G+ V GYGLTE++PV+A P
Sbjct: 313 DRLVYRRIRQAVGGRLRFVISGGAALNPVIGQFFYAVGIPVIEGYGLTETAPVLAVNWPD 372
Query: 292 CNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDED 351
G+VG P+ +++ A E+L RG + GY+ P T++A +D
Sbjct: 373 RPRYGTVGRPLPEVTLQL--APDGEIL---------ARGPNITPGYWNRPEETQEAF-QD 420
Query: 352 GWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLI 411
GW +TGD+G P G L + R K IVLSTG+NV P +E+ L S I
Sbjct: 421 GWFHTGDLGEWTPD----------GFLRVTDRKKYIIVLSTGKNVAPQAVEQKLLLSPWI 470
Query: 412 RQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSK 471
Q VV+G Q+ A++ + E+V A+ + H DA + + L + + +
Sbjct: 471 EQAVVLGNRQKYVAALLYLNPEKVQEWAR---LHHRDAPSYPELLQDAELSAFMMQEVER 527
Query: 472 CSFQIGPIHVVDEPFTVNFL 491
+ + P + P V FL
Sbjct: 528 VTADLAPF---ERPKKVAFL 544
>gi|149277989|ref|ZP_01884128.1| AMP-binding enzyme, putative [Pedobacter sp. BAL39]
gi|149231187|gb|EDM36567.1| AMP-binding enzyme, putative [Pedobacter sp. BAL39]
Length = 637
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 132/428 (30%), Positives = 215/428 (50%), Gaps = 56/428 (13%)
Query: 24 VFSYDEIIDL-GRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHK 82
V SY I++L GR +++ + + R + D ++ +YTSGTTG PKGVML+H
Sbjct: 159 VISYAAILELKGRLTKERLFEISTLRN-----AVLPSDTSSLIYTSGTTGTPKGVMLSHS 213
Query: 83 NLLHQIRSLYDIVPA-ENGDKFLSMLPPWHVYERACGYFIF-SRGIELMYT-AVRNLKDD 139
NL+ ++ + +P + + FLS LP HV+ER Y + ++G ++ + ++ L +
Sbjct: 214 NLVENVKVCLEQIPVIDETETFLSFLPLSHVFERTATYHVCCAQGCKIAFAQSLELLAKN 273
Query: 140 LQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCL 199
+ +P M VP + E ++ K I + +A + ++ + A ++ I E
Sbjct: 274 MGEIRPTVMNCVPRLLERIHD---KAIKSGTADGGLKSKIFLWALEAGQQYRNIKE---- 326
Query: 200 TRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLP 258
N K P L A LAEKLV+ KI+ G + K +SGG +LP
Sbjct: 327 --NGKTPGLLSA---------------GKKALAEKLVFSKIKEKTGGNLKFMISGGAALP 369
Query: 259 MHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEI--------KIV 310
++ F+ +G+K+ G+GLTE+SPV+A V G+VG I EI K++
Sbjct: 370 KNVGEFFGNLGIKILEGFGLTETSPVMAVTEFHRQVYGTVGRVIPGIEIGIQHVETKKMI 429
Query: 311 DAETNEVLPAG---SKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHS 367
+ +T+E +G + VRG VMQGYF P+ T +A+D+D W +TGDIG
Sbjct: 430 NIQTHETFKENFECEEGEIIVRGHCVMQGYFNKPAETAEAIDKDNWFHTGDIG------- 482
Query: 368 RGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAI 427
R G L + R K+ IV + G+NV P +E L+S I + +IG + A
Sbjct: 483 ----RFYKGNLQITDRLKNMIVNAYGKNVYPTPVENNYLKSLKIDGLFLIGDKREYLTAF 538
Query: 428 IVPDKEEV 435
++P++E +
Sbjct: 539 VIPNRENM 546
>gi|423301229|ref|ZP_17279253.1| hypothetical protein HMPREF1057_02394 [Bacteroides finegoldii
CL09T03C10]
gi|408471830|gb|EKJ90359.1| hypothetical protein HMPREF1057_02394 [Bacteroides finegoldii
CL09T03C10]
Length = 602
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 129/438 (29%), Positives = 210/438 (47%), Gaps = 54/438 (12%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYD-IVPAENGDKFLSMLPPWHVYERAC 117
DD+A +YTSGTTG PKGVML H L Q R+ D + + D ++ LP HV+E+A
Sbjct: 180 DDLANILYTSGTTGEPKGVMLHHSCYLEQFRTHDDRLTTMSDKDVSMNFLPLTHVFEKAW 239
Query: 118 GYFIFSRGIEL-MYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 176
Y +G+++ + +++ ++ +P M SVP +E +Y+G+Q++I ++ ++ +
Sbjct: 240 CYLCIHKGVQICINLRPADIQTTIKEIRPTLMCSVPRFWEKVYAGVQEKINETTGMKKAL 299
Query: 177 ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLV 236
IR+ +I+ L + + P ++ + + + EK +
Sbjct: 300 MLDAIRVG-------KIHNLDYLRKGKTPP-------------VMNQLKYKFY---EKTI 336
Query: 237 YKKIQSAIGISKAGV--SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNV 294
Y ++ IGI + G ++P I+ F ++G+ + VGYGLTES+ ++ P
Sbjct: 337 YSLLKKTIGIENGNFFPTAGAAVPDEINEFVHSVGINMVVGYGLTESTATVSCTLPVGYD 396
Query: 295 LGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWL 354
+GSVG + E+KI E NE+L +RG + +GY+K AT A+D DGW
Sbjct: 397 IGSVGVVLPGVEVKI--GEDNEIL---------LRGKTITKGYYKKAEATAAAIDPDGWF 445
Query: 355 NTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQI 414
+TGD G+ G L L R KD S G+ + P LE + I QI
Sbjct: 446 HTGDAGYFK-----------NGQLFLTERIKDLFKTSNGKYIAPQALETKLVIDRYIDQI 494
Query: 415 VVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSKCSF 474
+I ++ A+IVP V AK I + D SEL + I L+ R T + F
Sbjct: 495 AIIADQRKFVSALIVPVYGYVKEYAKEKGIEYKDMSELLQHPKIVGLF-RARIETLQQQF 553
Query: 475 ----QIGPIHVVDEPFTV 488
QI ++ EPF++
Sbjct: 554 AHYEQIKRFTLLPEPFSM 571
>gi|37678678|ref|NP_933287.1| long-chain acyl-CoA synthetase [Vibrio vulnificus YJ016]
gi|37197418|dbj|BAC93258.1| long-chain acyl-CoA synthetase [Vibrio vulnificus YJ016]
Length = 616
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 132/437 (30%), Positives = 208/437 (47%), Gaps = 55/437 (12%)
Query: 52 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWH 111
+ E +D+ T +YTSGTTG PKGVML + N+ Q+ + D L LP H
Sbjct: 186 RLEQANFEDLLTLIYTSGTTGQPKGVMLDYSNIAAQLEGHDRRLSLTENDVSLCFLPLSH 245
Query: 112 VYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSS 170
V+ERA +++ +G Y ++D L +P M +VP YE ++S I +++ +
Sbjct: 246 VFERAWTFYVLYKGGTNCYLQDTMQVRDALSDIKPTVMCAVPRFYEKIFSAIHEKVSRAP 305
Query: 171 AARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHL 230
R+++ + + + + EG +QPS + L H
Sbjct: 306 LMRKIMFTWAVNMGAKMSVCHQ--EG-------RQPSLM---------------LKKAHA 341
Query: 231 LAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARR 289
LA+KLV K+++ +G + + GG L I F+ AIG+ V++GYG+TE++ I+
Sbjct: 342 LADKLVLSKLRALLGGNINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTATISCWD 401
Query: 290 PTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALD 349
C S+G + ++KI E NE+L VRG VM+GY+K P T++ D
Sbjct: 402 DKCFNPDSIGMSMPGAQVKI--GENNEIL---------VRGPMVMRGYYKLPEETEKTFD 450
Query: 350 EDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSS 409
E G+L TGD G I H G L + R K+ + S G+ + P +E A +
Sbjct: 451 EHGFLKTGDAGHIDEH----------GNLFITDRIKELMKTSGGKYIAPQMIEGAIGKDH 500
Query: 410 LIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLL 461
I QI VI ++ A+IVP + + AK L+I + D EL K EK ++ L
Sbjct: 501 FIEQIAVIADTRKFVSALIVPCFDSLEEYAKELNIKYHDRVELIKHHQVVEMLEKRVNDL 560
Query: 462 YGELRKWTSKCSFQIGP 478
EL K+ F++ P
Sbjct: 561 QKELAKFEQVKKFKLLP 577
>gi|339629861|ref|YP_004721504.1| AMP-dependent synthetase and ligase [Sulfobacillus acidophilus TPY]
gi|339287650|gb|AEJ41761.1| AMP-dependent synthetase and ligase [Sulfobacillus acidophilus TPY]
Length = 593
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 139/440 (31%), Positives = 209/440 (47%), Gaps = 60/440 (13%)
Query: 60 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDI---VPA---ENGDKFLSMLPPWHVY 113
D+AT VYTSGTTG PKGVMLTH NLL I ++ + PA D LS LP H+
Sbjct: 161 DLATIVYTSGTTGLPKGVMLTHGNLLANIEAILALRATSPAFTVTREDVALSFLPLSHIL 220
Query: 114 ERACGYFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAA 172
ER S+G+ + Y + + +L+ +P M++VP ++E LY+ I Q+ +
Sbjct: 221 ERMVHLLFLSQGVTIAYAESPERIPANLREIRPTVMVAVPRIFEKLYAAILDQMTRAGGV 280
Query: 173 RRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLA 232
+R + IR R YE F W W W A
Sbjct: 281 KRRLFDWAIRQGI------RRYERF-----------------WQWGGSRPVWGW-ADRWA 316
Query: 233 EKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPT 291
++LVY++I+ A+G + +SGG +L I F+ A+G+ V GYGLTE++PV+A P
Sbjct: 317 DRLVYRRIRQAVGGRLRFVISGGAALNPVIGQFFYAVGIPVIEGYGLTETAPVLAVNWPD 376
Query: 292 CNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDED 351
G+VG P+ +++ A E+L RG + GY+ P T++A +D
Sbjct: 377 RPRYGTVGRPLPEVTLQL--APDGEIL---------ARGPNITPGYWNRPEETQEAF-QD 424
Query: 352 GWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLI 411
GW +TGD+G P G L + R K IVLSTG+NV P +E+ L S I
Sbjct: 425 GWFHTGDLGEWTPD----------GFLRVTDRKKYIIVLSTGKNVAPQAVEQKLLLSPWI 474
Query: 412 RQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSK 471
Q VV+G Q+ A++ + E+V A+ + H DA + + L + + +
Sbjct: 475 EQAVVLGNRQKYVAALLYLNPEKVQEWAR---LHHRDAPSYPELLQDAELSAFMMQEVER 531
Query: 472 CSFQIGPIHVVDEPFTVNFL 491
+ + P + P V FL
Sbjct: 532 VTADLAPF---ERPKKVAFL 548
>gi|320157490|ref|YP_004189869.1| long-chain-fatty-acid--CoA ligase [Vibrio vulnificus MO6-24/O]
gi|319932802|gb|ADV87666.1| long-chain-fatty-acid-CoA ligase [Vibrio vulnificus MO6-24/O]
Length = 601
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 132/437 (30%), Positives = 208/437 (47%), Gaps = 55/437 (12%)
Query: 52 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWH 111
+ E +D+ T +YTSGTTG PKGVML + N+ Q+ + D L LP H
Sbjct: 171 RLEQANFEDLLTLIYTSGTTGQPKGVMLDYANIAAQLEGHDRRLSLTENDVSLCFLPLSH 230
Query: 112 VYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSS 170
V+ERA +++ +G Y ++D L +P M +VP YE ++S I +++ +
Sbjct: 231 VFERAWTFYVLYKGGTNCYLQDTMQVRDALSDIKPTVMCAVPRFYEKIFSAIHEKVSRAP 290
Query: 171 AARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHL 230
R+++ + + + + EG +QPS + L H
Sbjct: 291 LMRKIMFTWAVNMGAKMSVCHQ--EG-------RQPSLM---------------LKKAHA 326
Query: 231 LAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARR 289
LA+KLV K+++ +G + + GG L I F+ AIG+ V++GYG+TE++ I+
Sbjct: 327 LADKLVLSKLRALLGGNINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTATISCWD 386
Query: 290 PTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALD 349
C S+G + ++KI E NE+L VRG VM+GY+K P T++ D
Sbjct: 387 DKCFNPDSIGMSMPGAQVKI--GENNEIL---------VRGPMVMRGYYKLPEETEKTFD 435
Query: 350 EDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSS 409
E G+L TGD G I H G L + R K+ + S G+ + P +E A +
Sbjct: 436 EHGFLKTGDAGHIDEH----------GNLFITDRIKELMKTSGGKYIAPQMIEGAIGKDH 485
Query: 410 LIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLL 461
I QI VI ++ A+IVP + + AK L+I + D EL K EK ++ L
Sbjct: 486 FIEQIAVIADTRKFVSALIVPCFDSLEEYAKELNIKYHDRVELIKHHQVVEMLEKRVNDL 545
Query: 462 YGELRKWTSKCSFQIGP 478
EL K+ F++ P
Sbjct: 546 QKELAKFEQVKKFKLLP 562
>gi|444379072|ref|ZP_21178257.1| Long-chain-fatty-acid--CoA ligase [Enterovibrio sp. AK16]
gi|443676909|gb|ELT83605.1| Long-chain-fatty-acid--CoA ligase [Enterovibrio sp. AK16]
Length = 598
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 131/429 (30%), Positives = 203/429 (47%), Gaps = 55/429 (12%)
Query: 60 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGY 119
D+ T +YTSGTTG PKGVML + N+ QI S ++ + L+ LP HV+ER +
Sbjct: 178 DLMTLIYTSGTTGEPKGVMLDYANVAAQIESHDKVLGISENEVSLAFLPLSHVFERCWSF 237
Query: 120 FIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 178
++ G Y + N +++ LQ +P M +VP YE +YS + +++ T+S ++ + R
Sbjct: 238 YVLHHGATNCYLSNTNAIREALQEVKPTVMCAVPRFYEKIYSAVHEKVATASPVKKGMFR 297
Query: 179 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 238
A + I +TR K+P+ WL + H +A+KLV
Sbjct: 298 AAVYIGNLMAE---------ITRKGKKPA------PWLKS---------AHRMADKLVLS 333
Query: 239 KIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 297
K++ +G + + GG L I F+ AIGV V++GYG+TE++ I+ S
Sbjct: 334 KLRQLLGGNITMMPCGGAKLEPTIGRFFHAIGVNVKLGYGMTETTATISCWDSGSFDPDS 393
Query: 298 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 357
+G P+ + E+KI + NE+L VRG VM+GY+ T + DG+L TG
Sbjct: 394 IGMPMPNAEVKI--GQNNEIL---------VRGPMVMRGYYNKAKETAETFTTDGFLKTG 442
Query: 358 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 417
D G I G L + R K+ + S G+ + P +E + I QI V+
Sbjct: 443 DAGHIDAQ----------GNLFITDRIKELMKTSGGKYIAPQVIEGKLGKDHFIEQIAVV 492
Query: 418 GQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLLYGELRKWT 469
+ A+IVP E + AK L+I + D EL K EK + L EL K+
Sbjct: 493 ADARHFVSALIVPCFESLETWAKELNIKYHDRMELIKHSEVVEMFEKRVEELQKELAKFE 552
Query: 470 SKCSFQIGP 478
F + P
Sbjct: 553 QVKKFTLLP 561
>gi|404404087|ref|ZP_10995671.1| AMP-forming long-chain acyl-CoA synthetase [Alistipes sp. JC136]
Length = 635
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 139/459 (30%), Positives = 222/459 (48%), Gaps = 68/459 (14%)
Query: 54 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNL---LHQIRSLYDIVPAENGDKFLSMLPPW 110
+ I +DD AT YTSGTT +PKGV+LTH+N + Q S DI P + L +LP
Sbjct: 170 QAIQNDDYATITYTSGTTSDPKGVILTHRNYTANVEQALSRVDIPPHY---RTLIILPLD 226
Query: 111 HVYERACGYFIF----------SRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYS 160
H + G++I G M T ++N+ +++ +PH+++SVP + +
Sbjct: 227 HCFAHVVGFYIMIACGASVATVQIGATPMET-LKNIPQNIREVKPHFLLSVPALAKNFRK 285
Query: 161 GIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARI 220
GI+ I + +R ++AY +G+ W RI
Sbjct: 286 GIESSIRAKGKFTEGLFHLALRTAYAYNR-----DGYSKGSG--------------W-RI 325
Query: 221 ICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLT 279
+ L P L + ++++K++ A G S K V GG L + FY AIG+ + GYGL+
Sbjct: 326 V---LKPFVALFDAVLFRKVREAFGGSLKFFVGGGALLDAELQRFYYAIGIPMFQGYGLS 382
Query: 280 ESSPVIAARRPTC--NVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGY 337
E++PVI+ P + GS G + ++KI+D E EV P G KG + +RG VM GY
Sbjct: 383 EATPVISTNSPNYHWHRFGSSGKILIPLDLKILDEEGREV-PRGQKGEIVIRGENVMAGY 441
Query: 338 FKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVE 397
+KNP AT + DGWL+TGD+G+++ L + GR K ++ S GE
Sbjct: 442 WKNPDATADTV-RDGWLHTGDMGYVSEDD----------FLYVLGRFKSLLIASDGEKYS 490
Query: 398 PLELEEAAL-RSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEK 456
P +EEA + +S I QI++ GAI+VP++E +L + I + + ++ E
Sbjct: 491 PEGMEEAIVDKSPYIDQIIIHNNQDPFTGAIVVPNREALLRELEARKIPEGEHAAVAAE- 549
Query: 457 TISLLYGELRKWTSKCSFQ--------IGPIHVVDEPFT 487
+L E+ ++ + F + +VDE FT
Sbjct: 550 ---ILGAEIDRYRAGGVFAGEFPERWLPAGLAIVDEAFT 585
>gi|27364106|ref|NP_759634.1| long-chain-fatty-acid--CoA ligase [Vibrio vulnificus CMCP6]
gi|27360224|gb|AAO09161.1| Long-chain-fatty-acid--CoA ligase [Vibrio vulnificus CMCP6]
Length = 601
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 132/437 (30%), Positives = 208/437 (47%), Gaps = 55/437 (12%)
Query: 52 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWH 111
+ E +D+ T +YTSGTTG PKGVML + N+ Q+ + D L LP H
Sbjct: 171 RLEQANFEDLLTLIYTSGTTGQPKGVMLDYANIAAQLEGHDRRLSLTENDVSLCFLPLSH 230
Query: 112 VYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSS 170
V+ERA +++ +G Y ++D L +P M +VP YE ++S I +++ +
Sbjct: 231 VFERAWTFYVLYKGGTNCYLQDTMQVRDALSDIKPTVMCAVPRFYEKIFSAIHEKVSRAP 290
Query: 171 AARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHL 230
R+++ + + + + EG +QPS + L H
Sbjct: 291 LMRKIMFTWAVNMGAKMSVCHQ--EG-------RQPSLM---------------LKKAHA 326
Query: 231 LAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARR 289
LA+KLV K+++ +G + + GG L I F+ AIG+ V++GYG+TE++ I+
Sbjct: 327 LADKLVLSKLRALLGGNINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTATISCWD 386
Query: 290 PTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALD 349
C S+G + ++KI E NE+L VRG VM+GY+K P T++ D
Sbjct: 387 DKCFNPDSIGMSMPGAQVKI--GENNEIL---------VRGPMVMRGYYKLPEETEKTFD 435
Query: 350 EDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSS 409
E G+L TGD G I H G L + R K+ + S G+ + P +E A +
Sbjct: 436 EHGFLKTGDAGHIDEH----------GNLFITDRIKELMKTSGGKYIAPQMIEGAIGKDH 485
Query: 410 LIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLL 461
I QI VI ++ A+IVP + + AK L+I + D EL K EK ++ L
Sbjct: 486 FIEQIAVIADTRKFVSALIVPCFDSLEEYAKELNIKYHDRVELIKHHQVVEMLEKRVNDL 545
Query: 462 YGELRKWTSKCSFQIGP 478
EL K+ F++ P
Sbjct: 546 QKELAKFEQVKKFKLLP 562
>gi|317051585|ref|YP_004112701.1| AMP-dependent synthetase and ligase [Desulfurispirillum indicum S5]
gi|316946669|gb|ADU66145.1| AMP-dependent synthetase and ligase [Desulfurispirillum indicum S5]
Length = 611
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 139/418 (33%), Positives = 200/418 (47%), Gaps = 60/418 (14%)
Query: 56 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDK-FLSMLPPWHVYE 114
I +D+ T +YTSGTTG PKGVMLTH N+L + + D+ FLS LP HV E
Sbjct: 178 ITPEDLITVIYTSGTTGVPKGVMLTHSNMLFDACAGVQKLGGMAEDEVFLSFLPLSHVLE 237
Query: 115 RACGYFIFSRGIELMYTA-------VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIF 167
R GY LMY A V + +++Q +P M+SVP ++E +YS I + +
Sbjct: 238 RTAGYH-----APLMYGAHVAFAENVDKVVENIQEIRPTVMVSVPRLFEKIYSRIYENVH 292
Query: 168 TSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWP 227
+ A RR + + + Y ++R E QP L
Sbjct: 293 QAPAVRRSLFHWAVDVGKQYV-YRRYIE--------NQP---------------VGSLGV 328
Query: 228 LHLLAEKLVYKKIQSAI-GISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIA 286
+ LA++LV+ KI+ G + +SGG L I+ F A+G+ V GYGLTE+SP +
Sbjct: 329 KYGLAKRLVFSKIKPRFGGRMRFFISGGAPLDKTINEFMWAVGIPVFEGYGLTETSPALT 388
Query: 287 ARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQ 346
N GSVG ++ TE+K AE E+L VRG QVMQGY+KNP AT Q
Sbjct: 389 LNTIADNRFGSVGQVLDQTEVKT--AEDGELL---------VRGPQVMQGYYKNPEATAQ 437
Query: 347 ALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAAL 406
+ DGWL TGDI I + G + + R K+ IV + G+NV P +E
Sbjct: 438 TII-DGWLYTGDIARIDEN----------GFVYIVDRKKEIIVTAGGKNVAPQPIENELK 486
Query: 407 RSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGE 464
I Q V G + A++ P+ E +L A+ + + + +L K + L+ E
Sbjct: 487 LDKYISQAFVYGDRKPYLVALLTPNVERLLEFAQDKKLNYIEIRDLVTHKKVHKLFEE 544
>gi|379729826|ref|YP_005322022.1| putative long chain fatty-acid CoA ligase [Saprospira grandis str.
Lewin]
gi|378575437|gb|AFC24438.1| putative long chain fatty-acid CoA ligase [Saprospira grandis str.
Lewin]
Length = 607
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 121/436 (27%), Positives = 211/436 (48%), Gaps = 45/436 (10%)
Query: 54 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 113
+ I ++D+AT +YTSGTTG PKGVML+H N+ +R + +P + D LS LP HV+
Sbjct: 175 DKIKAEDLATIIYTSGTTGKPKGVMLSHNNIATNVRDVLPFIPLQPQDIALSFLPLCHVF 234
Query: 114 ERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAA 172
ER Y ++G ++ Y + L + LQ +PH+ +VP + E +Y + ++
Sbjct: 235 ERTVTYSYMAKGAQIFYAKDLDTLSETLQDVRPHFFTTVPRLLEKVYEKMMLKVQAEGGL 294
Query: 173 RRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLA 232
+ + + ++ Y DW A + AI W +A
Sbjct: 295 KEKIFNWALGLTEKYD------------------------FDWQ-AAGLEAIKWK---IA 326
Query: 233 EKLVYKKIQSAIGISKAG-VSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAAR--R 289
+KLV+ K++ +G G V+G + P + + A+GV ++ GYGLTE+SP I+
Sbjct: 327 DKLVFSKVRDRLGGRLKGIVTGAAACPPRMTQLFSAVGVPIREGYGLTETSPAISINIFE 386
Query: 290 PTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALD 349
P ++GSVG + ++KI ++ +G V V+G+ VM GY++ T + +
Sbjct: 387 PYQAMIGSVGPILPSVQVKIDQDDSY----GPGEGEVLVKGNSVMMGYYRKEDKTAEVFN 442
Query: 350 EDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSS 409
E+GW TGDIG I +++ L + R K+ + S G+ V P +E
Sbjct: 443 EEGWFLTGDIGKIV------ENKKGIKFLKITDRKKELLKTSGGKYVAPTPIESTLKEDL 496
Query: 410 LIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASE-LSKEKTISLLYGELRKW 468
L+ Q++V+G+ ++ A+I P+ E + + +I E L+ K ++ + ++
Sbjct: 497 LVEQVMVVGEKRKFVSALIQPNFESLKNWCQDKNITWTKPEEVLANPKVLAYFQAVVNRY 556
Query: 469 TSKCSF--QIGPIHVV 482
+ S QI H+V
Sbjct: 557 NPRFSKVEQIKKFHLV 572
>gi|154492200|ref|ZP_02031826.1| hypothetical protein PARMER_01834 [Parabacteroides merdae ATCC
43184]
gi|423345257|ref|ZP_17322946.1| hypothetical protein HMPREF1060_00618 [Parabacteroides merdae
CL03T12C32]
gi|423722201|ref|ZP_17696377.1| hypothetical protein HMPREF1078_00440 [Parabacteroides merdae
CL09T00C40]
gi|154087425|gb|EDN86470.1| AMP-binding enzyme [Parabacteroides merdae ATCC 43184]
gi|409223043|gb|EKN15980.1| hypothetical protein HMPREF1060_00618 [Parabacteroides merdae
CL03T12C32]
gi|409242692|gb|EKN35453.1| hypothetical protein HMPREF1078_00440 [Parabacteroides merdae
CL09T00C40]
Length = 635
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 130/468 (27%), Positives = 238/468 (50%), Gaps = 57/468 (12%)
Query: 18 IVEEIPVF-----SYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTG 72
+++E+P + S+ E+ +G+E + S + +++ ++D AT YTSGTT
Sbjct: 134 VIDELPEYKEKEISWSEVFRMGKEYLASHSLEDFLAVG---QSLQNNDYATITYTSGTTA 190
Query: 73 NPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIF-SRG-----I 126
+PKGV+LTH+N + V ++ + L +LP H + G++IF S+G +
Sbjct: 191 DPKGVILTHRNYTANVEQALSCVDIDDTWRTLIILPLDHCFAHVVGFYIFMSKGASVATV 250
Query: 127 ELMYTAVRNLKD---DLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRI 183
++ T + LK+ +++ ++P+ ++SVP + + I++ I + +++
Sbjct: 251 QVGRTGLETLKNIPVNIKEFKPYLILSVPALAKNFKKNIEQGIRAQGKNITRLFDFALKV 310
Query: 184 SFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSA 243
++ Y R +G R + +L PL L + +++ K++
Sbjct: 311 AYIYNGDGREDKG----------------------RGVRFLLKPLVSLFDHMLFTKVREN 348
Query: 244 IGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPI 302
G K + GG L + FY AIG+ + GYGL+E++PVI+ P + GS G +
Sbjct: 349 FGGQLKFFIGGGALLDKDLQKFYYAIGLPMYQGYGLSEATPVISTNGPHRHTFGSSGMLV 408
Query: 303 NHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWI 362
++KI DA+ E LPAG KG + +RG VM GY+KNP +T + + DGWL TGD+G++
Sbjct: 409 RPLDLKICDADGKE-LPAGEKGEIVIRGENVMAGYWKNPVSTAETV-RDGWLYTGDMGYM 466
Query: 363 APHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALR-SSLIRQIVVIGQDQ 421
H G+L + GR K ++ S GE P +EEA + SS I Q+++
Sbjct: 467 G--HD--------GLLYVLGRFKSLLIGSDGEKYSPEGIEEALVEHSSCIDQLILYNNQS 516
Query: 422 RRPGAIIVPDKEEVLMAAKRLSIVHAD-ASELSKEKTISLLYGELRKW 468
A++VP+K+ + K L+ + D +S+ +E+ I ++ ++ ++
Sbjct: 517 PYTVALVVPNKDRL---KKHLTHQYLDLSSDKGREEAIRIIQSQIDRF 561
>gi|347755175|ref|YP_004862739.1| Long-chain acyl-CoA synthetase [Candidatus Chloracidobacterium
thermophilum B]
gi|347587693|gb|AEP12223.1| Long-chain acyl-CoA synthetases (AMP-forming) [Candidatus
Chloracidobacterium thermophilum B]
Length = 618
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 150/481 (31%), Positives = 217/481 (45%), Gaps = 89/481 (18%)
Query: 1 MRFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLG-RESRKAFSDSNDARKHYKYETIGSD 59
++FI+ +V + + V +++E+ LG R S F D +
Sbjct: 140 LKFIVTF--DPINVTAPLPSRVKVLTFEELAQLGDRGSVGDFLDE-------MVRAASPE 190
Query: 60 DIATYVYTSGTTGNPKGVMLTHKNL----LHQIRSLYDIVPAENGDKFLSMLPPWHVYER 115
D+AT +YTSGTTG+PKGVMLTH NL + + L D+ P D LS LP HVYER
Sbjct: 191 DLATLIYTSGTTGDPKGVMLTHDNLTFNLVANVERLTDLGPE---DTALSYLPLSHVYER 247
Query: 116 AC-GYFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYS----------GIQ 163
F++S G+ + + +V + +L QP M SVP ++E + + G++
Sbjct: 248 TVMNVFVYS-GVSVYFAESVDTVAQNLMEVQPTVMTSVPRIFEKILARIEEEGRKAGGLK 306
Query: 164 KQIFT-SSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIIC 222
++FT + R +RAL R + P L D +A
Sbjct: 307 TKLFTWAMETGREYSRALHRGNV--------------------PPMLSLQYDIAYA---- 342
Query: 223 AILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTES 281
LV KI++ I K SGG +L + + +G+ + GYGLTE+
Sbjct: 343 ------------LVLSKIRNKIAPRIKFFSSGGAALAEDVMHAFSGMGLTILQGYGLTET 390
Query: 282 SPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNP 341
SPVI + N G+VG P+ EIKI A E+L RG VM+GY+ P
Sbjct: 391 SPVITSNTKHENRPGTVGKPLRGVEIKI--APDGEIL---------TRGRHVMRGYYNKP 439
Query: 342 SATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLEL 401
T + L DGW +TGDIG I G L + R KD S G+ + P +
Sbjct: 440 DKTAEVLTPDGWFHTGDIGEI----------DADGFLRITDRKKDLFKTSGGKYIAPQPI 489
Query: 402 EEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLL 461
E A + S I Q VV+G ++ PGA+IVP V A+ L + +A +EL K I
Sbjct: 490 ENALVTSPHITQAVVVGNGRKFPGALIVPTPSSVQNLARELGLTNASYAELLKHPKILDF 549
Query: 462 Y 462
Y
Sbjct: 550 Y 550
>gi|351728737|ref|ZP_08946428.1| AMP-dependent synthetase and ligase [Acidovorax radicis N35]
Length = 628
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 127/436 (29%), Positives = 211/436 (48%), Gaps = 44/436 (10%)
Query: 58 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERAC 117
+DD+A VYTSGTTG PKGVMLTH N++ ++++ D + D FLS LP H +ER
Sbjct: 199 ADDLAAIVYTSGTTGKPKGVMLTHHNVVSDVKAVLDRIAPTVDDVFLSFLPLSHTFERTG 258
Query: 118 GYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 175
GY++ + G + Y +V L +DL+ +P ++SVP +YE +++ + +++ +
Sbjct: 259 GYYLPIAAGSCVAYARSVPQLAEDLKTVRPTVLVSVPRIYERIHAKLLEKLSPTP----- 313
Query: 176 VARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKL 235
++ A R + FC + P A D A + A+ WP + + L
Sbjct: 314 -----WKMQLYEAAQHRGWARFCTMQGLPAP----AAEDGRAAGWMAALPWP---VLQAL 361
Query: 236 VYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNV 294
V K + + G + VSGG L I + +G+ + GYG+TE++PV++ N
Sbjct: 362 VAKPLLAQFGGRVRVAVSGGAPLSPTIAKCFLGLGLPLIQGYGMTETAPVVSVNSLDDND 421
Query: 295 LGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWL 354
VG + +++I G ++VRG VM+GY+K P T + L DGWL
Sbjct: 422 PACVGKALPGVDVRI-----------GENRELQVRGPIVMKGYWKRPEDTAKILSPDGWL 470
Query: 355 NTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQI 414
TGD ++ G + ++GR K+ IV STGE + P +LE A L L+ Q
Sbjct: 471 GTGD-----------QAELVNGRIYIKGRIKEIIVTSTGEKIPPGDLELALLADPLLEQA 519
Query: 415 VVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSKCSF 474
V+G+++ + V + E A L + D L+ + + K T+ +
Sbjct: 520 FVVGENRPFIACVAVLNAGEWQRLAADLGLSAQDTDSLNHPSVHRAVLARIEKNTASFAR 579
Query: 475 QIGP--IHVVDEPFTV 488
P +H+ +P+T+
Sbjct: 580 YAVPRAVHLTLDPWTI 595
>gi|260771297|ref|ZP_05880224.1| long-chain-fatty-acid--CoA ligase [Vibrio furnissii CIP 102972]
gi|260613894|gb|EEX39086.1| long-chain-fatty-acid--CoA ligase [Vibrio furnissii CIP 102972]
Length = 604
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 134/437 (30%), Positives = 206/437 (47%), Gaps = 55/437 (12%)
Query: 52 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWH 111
+ E DD+ T +YTSGTTG PKGVML ++N+ Q+ + D L LP H
Sbjct: 171 RLEQANDDDLFTLIYTSGTTGKPKGVMLDYRNVGAQLEGHDQRLNLSQDDVSLCFLPLSH 230
Query: 112 VYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSS 170
V+ERA +++ +G Y V ++D L + +P M +VP YE ++S I +++ +
Sbjct: 231 VFERAWTFYVLYKGATNCYLQDVGQVRDALSQVRPTVMCAVPRFYEKIFSAIHEKVARAP 290
Query: 171 AARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHL 230
R+V+ F ++ C + ++ PS WA C H
Sbjct: 291 LHRKVM--------FTWSVNMGAKMARC-HQEKRTPS---------WALKQC------HQ 326
Query: 231 LAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARR 289
LA+KLV K++ +G + GG L I F+ AIG+ V++GYG+TE++ I+
Sbjct: 327 LADKLVLSKLRGLLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTATISCWD 386
Query: 290 PTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALD 349
C S+G + ++KI E NE+L VRG VM+GY+K P T Q D
Sbjct: 387 DQCFDPDSIGMTMPGAQVKI--GENNEIL---------VRGPMVMRGYYKMPEETAQTFD 435
Query: 350 EDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSS 409
E G+L TGD G I G L + R K+ + S G+ + P +E A +
Sbjct: 436 EHGFLKTGDAGHIDEQ----------GNLFITDRIKELMKTSGGKYIAPQVIEGAIGKDH 485
Query: 410 LIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLL 461
+ QI VI ++ A+IVP + + AK L+I + D EL K EK ++ L
Sbjct: 486 FVEQIAVIADTRKFVSALIVPCFDALEEHAKELNIKYHDRLELLKHSQIIEMFEKRVNEL 545
Query: 462 YGELRKWTSKCSFQIGP 478
L K+ F++ P
Sbjct: 546 QHGLAKFEQVKRFKLLP 562
>gi|423281106|ref|ZP_17260017.1| hypothetical protein HMPREF1203_04234 [Bacteroides fragilis HMW
610]
gi|404583270|gb|EKA87951.1| hypothetical protein HMPREF1203_04234 [Bacteroides fragilis HMW
610]
Length = 601
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 133/440 (30%), Positives = 212/440 (48%), Gaps = 54/440 (12%)
Query: 57 GSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSM--LPPWHVYE 114
G+DD+A +YTSGTTG PKGVML H L R ++DI + DK +SM LP HV+E
Sbjct: 178 GADDLANILYTSGTTGEPKGVMLHHSCYLEAFR-IHDIRLVDMTDKDVSMNFLPLTHVFE 236
Query: 115 RACGYFIFSRGIEL-MYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 173
+A Y +G+++ + +++ ++ +P M SVP +E +Y+G+Q++I ++ +
Sbjct: 237 KAWTYLCVHKGVQVCINLRPADIQTTIKEIRPTLMCSVPRFWEKVYAGVQEKIAETTGIK 296
Query: 174 RVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAE 233
+++ I++ RI+ L R K P ++ L + E
Sbjct: 297 KMLMLDAIKVG-------RIHNLEYL-RVGKTPPKMIQL---------------KYKFYE 333
Query: 234 KLVYKKIQSAIGISKAGV--SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPT 291
K +Y ++ IGI + G ++P I F ++G+ + VGYGLTES+ ++ T
Sbjct: 334 KTIYALLKKTIGIENGNFFPTAGAAVPDEICEFVHSVGIDMLVGYGLTESTATVSCTSKT 393
Query: 292 CNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDED 351
+GSVG + E+KI E NE+L +RG + +GY+K AT A+DE+
Sbjct: 394 GYDIGSVGQVMPEVEVKI--GEDNEIL---------LRGKTITKGYYKKAEATAAAIDEE 442
Query: 352 GWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLI 411
GW +TGD G+ G L L R KD S G+ + P LE + I
Sbjct: 443 GWFHTGDAGYFK-----------NGQLYLTERIKDLFKTSNGKYIAPQALETKLVIDRYI 491
Query: 412 RQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHAD-ASELSKEKTISLLYGELRKWTS 470
QI +I ++ A+IVP V AK I + D A L K I+L +
Sbjct: 492 DQIAIIADQRKFVSALIVPVYGFVKQYAKEKGIEYKDMAGLLEHPKIIALFRARIDTLQQ 551
Query: 471 KCSF--QIGPIHVVDEPFTV 488
+ + QI ++ EPF++
Sbjct: 552 QFAHYEQIKRFTLLPEPFSM 571
>gi|163802678|ref|ZP_02196569.1| leucine transcriptional activator [Vibrio sp. AND4]
gi|159173566|gb|EDP58386.1| leucine transcriptional activator [Vibrio sp. AND4]
Length = 602
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 138/466 (29%), Positives = 221/466 (47%), Gaps = 63/466 (13%)
Query: 31 IDLGRE----SRKAFSDSNDARKHY----KYETIGSDDIATYVYTSGTTGNPKGVMLTHK 82
I+LG S K F +D R+ + E DD+ T +YTSGTTG PKGVML +
Sbjct: 142 IELGEHAFAMSWKDFIAKSDGRQQAELDARLEQATEDDLLTLIYTSGTTGQPKGVMLDYA 201
Query: 83 NLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMY-TAVRNLKDDLQ 141
N+ Q+ + D L LP HV+ERA +++ +G Y ++D L
Sbjct: 202 NISAQLEGHDQRLSLTEDDVSLCFLPLSHVFERAWTFYVLYKGGTNCYLQDTMQVRDALS 261
Query: 142 RYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTR 201
+P M +VP YE ++S I +++ + R+++ + + +A + EG
Sbjct: 262 EVRPTVMSAVPRFYEKIFSAIHEKVARAPVHRKIILTWAVNMGAKMSACHQ--EG----- 314
Query: 202 NQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMH 260
++PS L L + LA+KLV K+++ +G + GG L
Sbjct: 315 --RKPSLL---------------LRKSYALADKLVLSKLRALLGGRINFMPCGGAKLDET 357
Query: 261 IDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA 320
I F+ AIG+ V++GYG+TE++ ++ C S+G + ++KI D NE+L
Sbjct: 358 IGRFFHAIGINVKLGYGMTETTATVSCWDDQCFDPSSIGMAMPGAQVKIGD--NNEIL-- 413
Query: 321 GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVL 380
VRG+ VM+GY+K P T++ DE G+L TGD G+I + G + +
Sbjct: 414 -------VRGAMVMRGYYKMPEETEKTFDEHGFLKTGDAGYIDEN----------GNVFI 456
Query: 381 EGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAK 440
R K+ + S G+ + P +E A + I QI VI ++ A+IVP + + AK
Sbjct: 457 TDRIKELMKTSNGKYIAPQVVEGAIGKDHFIEQIAVIADTRKFVSALIVPCYDSLEEYAK 516
Query: 441 RLSIVHADASELSK--------EKTISLLYGELRKWTSKCSFQIGP 478
L+I + D EL K EK ++ L EL K+ F++ P
Sbjct: 517 ELNIKYHDRVELIKHHQIVEMLEKRVNNLQKELAKFEQVKKFKLLP 562
>gi|406576196|ref|ZP_11051861.1| long-chain-fatty-acid--CoA ligase [Janibacter hoylei PVAS-1]
gi|404554395|gb|EKA59932.1| long-chain-fatty-acid--CoA ligase [Janibacter hoylei PVAS-1]
Length = 579
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 127/418 (30%), Positives = 200/418 (47%), Gaps = 55/418 (13%)
Query: 21 EIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLT 80
E+ V D + LG R+ +AR + + + DD+A VYTSGTTG PKGV+LT
Sbjct: 141 EVLVIDEDALEVLGERGRQV----PEARVIERRDAVTLDDLAGIVYTSGTTGRPKGVVLT 196
Query: 81 HKNLLHQIRSLYD---IVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNL 136
H++L ++ D G + L LP HV R+ Y G + + A ++
Sbjct: 197 HRHLAAEVAGCLDHPIGSVGRPGRRILIFLPMAHVLARSVAYIAAQSGATVGFWADFGSI 256
Query: 137 KDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEG 196
D L ++PH ++ VP V+E ++ G++ Q ++ +RV A + A R
Sbjct: 257 VDKLGSFRPHMVVGVPRVFEKVHDGVRSQ----ASGQRVSAVVFTKGEQVALACSR---- 308
Query: 197 FCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGG 255
+ + +PS + L H + ++L+Y K+++A+G V SGGG
Sbjct: 309 -AIGEGEGRPSLPLRLA---------------HAVFDRLLYTKVRAALGGEMEYVISGGG 352
Query: 256 SLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETN 315
+L + F+ +GV V GYGLTE+ I P +G+VG P+ E+++ D
Sbjct: 353 ALGERLGHFFRGVGVPVHEGYGLTETCAAITVNGPGVQRVGTVGRPLPGNEVRVAD---- 408
Query: 316 EVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCG 375
G + VRG+ V GY+ N AT++A+ DGW TGD+G +
Sbjct: 409 -------DGAISVRGAVVTDGYWGNDEATREAI-VDGWFATGDLGTLDDD---------- 450
Query: 376 GVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 433
G L + GRAK+ IV + G+NV P LE+ L+ Q +V+G + GA+I D E
Sbjct: 451 GYLTITGRAKEIIVTAGGKNVSPGPLEDVLRTHPLVSQAMVVGDGRPFVGALITLDPE 508
>gi|453382102|dbj|GAC83309.1| long-chain fatty-acid--CoA ligase [Gordonia paraffinivorans NBRC
108238]
Length = 595
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 130/421 (30%), Positives = 199/421 (47%), Gaps = 58/421 (13%)
Query: 19 VEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVM 78
++E VF + L + K D D R+ S D AT +YTSGTTG PKGV+
Sbjct: 143 LKETLVFDEHALPTLAKRGAKVADDELDRRRANAL----SSDAATLIYTSGTTGRPKGVL 198
Query: 79 LTHKNLLHQIRSLYDIVPA--ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRN 135
LTH N + + + D V A + G + L LP HV R + L +T + N
Sbjct: 199 LTHANFMAECAATRDAVGAGLQEGKQTLLFLPLAHVLARIIAVAAIENRVILGHTNDIAN 258
Query: 136 LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYE 195
L D ++PHY++SVP V+E +Y+ +A ++ Y+
Sbjct: 259 LVDLFATFKPHYVLSVPRVFEKVYN---------------------------SAKQKAYD 291
Query: 196 GFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAG-VSGG 254
G + +K + + A I L H L +KLVY K+++A+G G +SGG
Sbjct: 292 GGKGSIFEKATETAIEYSKAMEAGKIGLGLKLRHALFDKLVYGKLRAALGGQCEGAISGG 351
Query: 255 GSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAET 314
L + F+ +G+ V GYGLTE++ + A +GSVG P+ ++I AE
Sbjct: 352 APLGARLGHFFRGVGIPVYEGYGLTETTAAVTANNEKHQKVGSVGRPVPGVTVRI--AED 409
Query: 315 NEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRC 374
E+L V+G V GY++N AT A+ DGW +TGD+G +
Sbjct: 410 GEIL---------VKGPMVFSGYWQNEQATADAI-RDGWFHTGDVGTLDD---------- 449
Query: 375 GGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEE 434
G L + GR K+ IV + G+NV P +LE++ L+ Q +V+G ++ GA+I D E
Sbjct: 450 -GYLFITGRKKELIVTAGGKNVAPAQLEDSIRAHPLVSQCLVVGDNKPFIGALITLDAEA 508
Query: 435 V 435
+
Sbjct: 509 I 509
>gi|444424568|ref|ZP_21220024.1| hypothetical protein B878_01444 [Vibrio campbellii CAIM 519 = NBRC
15631]
gi|444242274|gb|ELU53789.1| hypothetical protein B878_01444 [Vibrio campbellii CAIM 519 = NBRC
15631]
Length = 602
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 132/447 (29%), Positives = 211/447 (47%), Gaps = 55/447 (12%)
Query: 42 SDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGD 101
+S A + E DD+ T +YTSGTTG PKGVML + N+ Q+ + D
Sbjct: 161 DNSQHAELEVRLEQAQEDDLLTLIYTSGTTGQPKGVMLDYANISAQLEGHDQRLSLTEDD 220
Query: 102 KFLSMLPPWHVYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLYS 160
L LP HV+ERA +++ +G Y ++D L +P M +VP YE ++S
Sbjct: 221 VSLCFLPLSHVFERAWTFYVLYKGGTNCYLQDTMQVRDALSEVRPTVMSAVPRFYEKIFS 280
Query: 161 GIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARI 220
I +++ + R+++ + + A + EG ++PS +
Sbjct: 281 AIHEKVSRAPVQRKIMFTWAVNMGAKMAACHQ--EG-------RKPSLM----------- 320
Query: 221 ICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLT 279
L + LA+KLV K+++ +G + GG L I F+ AIG+ V++GYG+T
Sbjct: 321 ----LRKSYALADKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGMT 376
Query: 280 ESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFK 339
E++ ++ C S+G + ++KI E NE+L VRG VM+GY+K
Sbjct: 377 ETTATVSCWDDQCFDPSSIGMAMPGAQVKI--GENNEIL---------VRGPMVMRGYYK 425
Query: 340 NPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPL 399
P T++ DE G+L TGD G+I + G L + R K+ + S G+ + P
Sbjct: 426 MPEETEKTFDEHGFLKTGDAGYIDEN----------GNLFITDRIKELMKTSNGKYIAPQ 475
Query: 400 ELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK----- 454
+E A + I QI VI ++ A+IVP + + AK L+I + D EL K
Sbjct: 476 VVEGAIGKDHFIEQIAVIADTRKFVSALIVPCYDSLEQYAKELNIKYHDRVELIKHHQIV 535
Query: 455 ---EKTISLLYGELRKWTSKCSFQIGP 478
EK ++ L EL K+ F++ P
Sbjct: 536 EMLEKRVNDLQKELAKFEQVKKFKLLP 562
>gi|269127261|ref|YP_003300631.1| AMP-dependent synthetase and ligase [Thermomonospora curvata DSM
43183]
gi|268312219|gb|ACY98593.1| AMP-dependent synthetase and ligase [Thermomonospora curvata DSM
43183]
Length = 605
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 118/378 (31%), Positives = 184/378 (48%), Gaps = 52/378 (13%)
Query: 60 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAE---NGDKFLSMLPPWHVYERA 116
D+AT +YTSGTTG PKG L+H N + R+ +E G L LP HV+ R
Sbjct: 179 DLATLIYTSGTTGRPKGCELSHGNFVVTTRNAIKGALSEVAMEGSSTLLFLPLAHVFARL 238
Query: 117 CGYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 176
GI L ++ + NL DL ++P ++++VP V+E +Y+G +++ +
Sbjct: 239 IQVACIESGIVLGHSDIPNLLPDLASFKPTFLLAVPRVFEKVYNGAEQKAIAGGKGKIFK 298
Query: 177 ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLV 236
A A I+++ G L +K + + LV
Sbjct: 299 AAADTAIAYSKALDAPGGPGLGLKLKRK--------------------------VFDLLV 332
Query: 237 YKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVL 295
Y+K++ A+G K VSGG +L + F+ +G+ + GYGLTE++ ++ RP+ +
Sbjct: 333 YRKLREAVGGQVKYAVSGGAALGERLGHFFRGVGIVILEGYGLTETTAPVSVNRPSALRV 392
Query: 296 GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLN 355
G+VG P+ ++I D G + V+G VMQGY+ N +ATK+A+ EDGW +
Sbjct: 393 GTVGQPVPGVTVRIAD-----------DGEILVKGVNVMQGYWANETATKEAI-EDGWFH 440
Query: 356 TGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIV 415
TGDIG + G L + GR K+ +V + G+NV P LE+ LI Q V
Sbjct: 441 TGDIG----------TMDADGFLKITGRKKEILVTAGGKNVAPAPLEDRLRAHPLISQCV 490
Query: 416 VIGQDQRRPGAIIVPDKE 433
VIG ++ A+I D E
Sbjct: 491 VIGDGRKFISALITLDNE 508
>gi|443293070|ref|ZP_21032164.1| Non-ribosomal peptide synthetase, AMP-dependent synthetase and
ligase [Micromonospora lupini str. Lupac 08]
gi|385882928|emb|CCH20315.1| Non-ribosomal peptide synthetase, AMP-dependent synthetase and
ligase [Micromonospora lupini str. Lupac 08]
Length = 604
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 122/391 (31%), Positives = 188/391 (48%), Gaps = 51/391 (13%)
Query: 47 ARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPA--ENGDKFL 104
A + + + + D+AT +YTSGTTG PKG +LTH+N+ I + ++P G L
Sbjct: 172 AEVEQRRKAVRAGDLATIIYTSGTTGRPKGCVLTHRNMYADIANAVPVLPNLFNAGAATL 231
Query: 105 SMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLYSGIQ 163
LP H + R + L + +NL +LQ ++P +++SVP V+E +Y+
Sbjct: 232 LFLPLAHAFARLIQIGVVQARATLAHCPDTKNLVGELQEFRPTFVLSVPRVFEKVYNA-A 290
Query: 164 KQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICA 223
KQ + V ARA +++ AY+ G L
Sbjct: 291 KQKAEADGKGGVFARAE-QVAIAYSEALETPRGPGLA----------------------- 326
Query: 224 ILWPLHLLAEKLVYKKIQSAIG-ISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESS 282
L H + ++LVY+K+++A+G + +SGG L + F+ +GV V GYGLTE+S
Sbjct: 327 -LRAQHAVFDRLVYRKLRAALGGRCRDAISGGAPLGARLGHFFRGVGVTVLEGYGLTETS 385
Query: 283 PVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPS 342
P AA PT +G+VG P+ ++I D G + + G V QGY+ N +
Sbjct: 386 PAAAANLPTGTRIGTVGRPLPGVTVRIED-----------DGEILISGDLVFQGYWHNEA 434
Query: 343 ATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELE 402
AT +AL DGW TGD+G + G L + GR K+ IV + G+NV P LE
Sbjct: 435 ATAEALSADGWFRTGDLGQL----------DADGYLSITGRKKELIVTAGGKNVAPAVLE 484
Query: 403 EAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 433
+ LI Q VV+G + A++ D+E
Sbjct: 485 DQVRAHPLISQCVVVGDAKPFIAALVTIDEE 515
>gi|260913053|ref|ZP_05919535.1| long-chain-fatty-acid--CoA ligase [Pasteurella dagmatis ATCC 43325]
gi|260632640|gb|EEX50809.1| long-chain-fatty-acid--CoA ligase [Pasteurella dagmatis ATCC 43325]
Length = 606
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 132/417 (31%), Positives = 199/417 (47%), Gaps = 54/417 (12%)
Query: 60 DIATYVYTSGTTGNPKGVMLTHKNLLHQIR---SLYDIVPAENGDKFLSMLPPWHVYERA 116
D+ T +YTSGTTG PKGVML + NL HQ+ + + + D LS LP H++ERA
Sbjct: 179 DLFTLIYTSGTTGEPKGVMLDYANLAHQLEAHDTAFTTLNVNQYDVSLSFLPFSHIFERA 238
Query: 117 CGYFIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 175
++ RG Y N +++ L +P M +VP YE +Y+ + ++ +S RR
Sbjct: 239 WVAYVLHRGAVNCYLEDSNKVREALSELRPTLMCAVPRFYEKIYTAVWDKVQKASFIRRT 298
Query: 176 VARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKL 235
+ I I + F L R Q +P I IL + LA+KL
Sbjct: 299 IFNWAISIG---------QKRFELAR-QTKP--------------IPFILRKKYALADKL 334
Query: 236 VYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNV 294
V K++ +G K GG L I LF+ +IG+ +++GYG+TE++ ++ +
Sbjct: 335 VLSKLRKLLGGRIKMMPCGGAKLEPTIGLFFHSIGINIKLGYGMTETTATVSCWKDNSFD 394
Query: 295 LGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWL 354
S+G + TE+KI E NE+L VRG VM+GY+K P TK+ EDG+L
Sbjct: 395 PNSIGTLMPGTEVKI--GENNEIL---------VRGGMVMRGYYKKPQETKETFTEDGFL 443
Query: 355 NTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQI 414
TGD G G L + R K+ + S G+ + P +E + I QI
Sbjct: 444 KTGDAGEF----------DANGNLYITDRIKELMKTSNGKYIAPQYIETKVGKDKFIEQI 493
Query: 415 VVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLY----GELRK 467
VI ++ A+IVP + AK+L+I + D EL K I ++ EL+K
Sbjct: 494 AVIADAKKYVSALIVPCFTSLEEHAKQLNIKYQDRMELIKHSEIIKMFEQRINELQK 550
>gi|340622356|ref|YP_004740808.1| Long-chain acyl-CoA synthetase [Capnocytophaga canimorsus Cc5]
gi|339902622|gb|AEK23701.1| Long-chain acyl-CoA synthetase [Capnocytophaga canimorsus Cc5]
Length = 597
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 128/427 (29%), Positives = 220/427 (51%), Gaps = 50/427 (11%)
Query: 46 DARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDI-VPAENGDKFL 104
DA+ + E +D+ T +YTSGTTG+PKGVML ++NL HQ+++ +DI + + D L
Sbjct: 166 DAQLQTQIENRSLNDLFTIIYTSGTTGDPKGVMLDYENLAHQLKN-HDIRLKLSSEDVSL 224
Query: 105 SMLPPWHVYERACGYFIFSRGIELMYTAV-RNLKDDLQRYQPHYMISVPLVYETLYSGIQ 163
+ LP HV+ERA ++ +G Y +K L +P M +VP YE ++ +
Sbjct: 225 AFLPLSHVFERAWTFYSLYKGATNHYLENPLEIKSALLEVKPTVMCAVPRFYEKVFGTVY 284
Query: 164 KQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICA 223
I +S +R+V SFA + K++ + + K+PS+
Sbjct: 285 DMISGASLVKRLV------FSFATRSGKQMLKA---KQKHKKPSWF-------------- 321
Query: 224 ILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESS 282
L + ++EKLV+ K++ ++G + GG +L I F++AIGV V++GYG+TE+
Sbjct: 322 -LQKAYQISEKLVFSKLKQSLGGRIRFMPCGGANLEPSIGRFFQAIGVNVKLGYGMTETL 380
Query: 283 PVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPS 342
++ L SVG + T++KI E NE+L V+G VM+GY+KNP
Sbjct: 381 ATVSCWDDIDFNLKSVGRLMPDTQMKI--GEDNEIL---------VKGGMVMKGYYKNPE 429
Query: 343 ATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELE 402
T++A +DG+L TGD G + +++ + + R K+ + S G+ + P +E
Sbjct: 430 ETQKAFTQDGFLKTGDAGNLDKYNN----------VFITDRIKELMKTSNGKYIAPQHIE 479
Query: 403 EAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE-KTISLL 461
+ ++I QI VI ++ A+IVP+ E + L+I + + ++L K + I +
Sbjct: 480 GKVGKDNVIDQIAVIADGRKFVSALIVPNFEVLQQMMADLNIKYKNTTDLIKNSQVIDFI 539
Query: 462 YGELRKW 468
L+K+
Sbjct: 540 NKRLQKF 546
>gi|254488381|ref|ZP_05101586.1| AMP-dependent synthetase and ligase [Roseobacter sp. GAI101]
gi|214045250|gb|EEB85888.1| AMP-dependent synthetase and ligase [Roseobacter sp. GAI101]
Length = 651
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 135/437 (30%), Positives = 212/437 (48%), Gaps = 51/437 (11%)
Query: 57 GSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERA 116
+ DIAT ++TSGTTG PKG ML+H LL ++ + +P D FLS+LP H +ER
Sbjct: 224 AAQDIATVIHTSGTTGQPKGAMLSHHALLWNAEAVTEFIPPLTSDIFLSLLPLAHSFERT 283
Query: 117 CGYFIFSRGIELMYTA--VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARR 174
Y + G + A + L+ DL +P +++VP +YE + +Q + S RR
Sbjct: 284 ATYHMAMMGGSRVVFARSIDTLRQDLLEVRPTILVAVPRLYERICEAVQSKAAHSPITRR 343
Query: 175 VVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEK 234
++ +A + + F+ +G K P + L ++WP + E+
Sbjct: 344 LLGQA---ATIGWQHFE-ARQG-----RAKPPGAITRL-----------LVWP---MLER 380
Query: 235 LVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARR-PTC 292
LV + + A G + + VSGG L + F +G+ + GYGLTE++PV+ A C
Sbjct: 381 LVARPVLRAFGGNVRVAVSGGAPLSLEASHFLIGLGLPLVEGYGLTEAAPVVTATTLKDC 440
Query: 293 NVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDG 352
N GS G P+ EI++ GS G + V+ +M GY+ +P + A+D+DG
Sbjct: 441 NP-GSAGRPLRGIEIRL-----------GSDGELLVKSPSLMSGYWHDPERSAAAIDQDG 488
Query: 353 WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIR 412
WL+TGD IA H+ G L + GR KD IVLSTG+ V +E A + L
Sbjct: 489 WLHTGD---IAEFHA--------GRLFITGRLKDLIVLSTGKKVVSATVEAAVVADPLFE 537
Query: 413 QIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSKC 472
Q VIG ++ AI+V ++ + AK+ + AD + + + E +
Sbjct: 538 QCCVIGDNRSCIVAIVVLCQDRWEVFAKQHHLDPADPNMPTAAAALLTRVTEAMRDPPPF 597
Query: 473 SFQIGPIHVVDEPFTVN 489
+ QI +H V P+TV
Sbjct: 598 A-QIRAVHAVLLPWTVE 613
>gi|53711664|ref|YP_097656.1| long-chain-fatty-acid-CoA ligase [Bacteroides fragilis YCH46]
gi|60679909|ref|YP_210053.1| AMP binding long chain acyl-CoA synthetase [Bacteroides fragilis
NCTC 9343]
gi|265765048|ref|ZP_06093323.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
gi|336407849|ref|ZP_08588345.1| hypothetical protein HMPREF1018_00360 [Bacteroides sp. 2_1_56FAA]
gi|375356753|ref|YP_005109525.1| putative AMP binding long chain acyl-CoA synthetase [Bacteroides
fragilis 638R]
gi|383116664|ref|ZP_09937412.1| hypothetical protein BSHG_1256 [Bacteroides sp. 3_2_5]
gi|423248321|ref|ZP_17229337.1| hypothetical protein HMPREF1066_00347 [Bacteroides fragilis
CL03T00C08]
gi|423253270|ref|ZP_17234201.1| hypothetical protein HMPREF1067_00845 [Bacteroides fragilis
CL03T12C07]
gi|423259296|ref|ZP_17240219.1| hypothetical protein HMPREF1055_02496 [Bacteroides fragilis
CL07T00C01]
gi|423263732|ref|ZP_17242735.1| hypothetical protein HMPREF1056_00422 [Bacteroides fragilis
CL07T12C05]
gi|423269687|ref|ZP_17248659.1| hypothetical protein HMPREF1079_01741 [Bacteroides fragilis
CL05T00C42]
gi|423272755|ref|ZP_17251702.1| hypothetical protein HMPREF1080_00355 [Bacteroides fragilis
CL05T12C13]
gi|423282376|ref|ZP_17261261.1| hypothetical protein HMPREF1204_00799 [Bacteroides fragilis HMW
615]
gi|52214529|dbj|BAD47122.1| putative long-chain-fatty-acid-CoA ligase [Bacteroides fragilis
YCH46]
gi|60491343|emb|CAH06091.1| putative AMP binding long chain acyl-CoA synthetase [Bacteroides
fragilis NCTC 9343]
gi|251948055|gb|EES88337.1| hypothetical protein BSHG_1256 [Bacteroides sp. 3_2_5]
gi|263254432|gb|EEZ25866.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
gi|301161434|emb|CBW20974.1| putative AMP binding long chain acyl-CoA synthetase [Bacteroides
fragilis 638R]
gi|335944928|gb|EGN06745.1| hypothetical protein HMPREF1018_00360 [Bacteroides sp. 2_1_56FAA]
gi|387776876|gb|EIK38976.1| hypothetical protein HMPREF1055_02496 [Bacteroides fragilis
CL07T00C01]
gi|392657170|gb|EIY50807.1| hypothetical protein HMPREF1067_00845 [Bacteroides fragilis
CL03T12C07]
gi|392660428|gb|EIY54042.1| hypothetical protein HMPREF1066_00347 [Bacteroides fragilis
CL03T00C08]
gi|392700533|gb|EIY93695.1| hypothetical protein HMPREF1079_01741 [Bacteroides fragilis
CL05T00C42]
gi|392706844|gb|EIY99965.1| hypothetical protein HMPREF1056_00422 [Bacteroides fragilis
CL07T12C05]
gi|392708319|gb|EIZ01426.1| hypothetical protein HMPREF1080_00355 [Bacteroides fragilis
CL05T12C13]
gi|404581944|gb|EKA86639.1| hypothetical protein HMPREF1204_00799 [Bacteroides fragilis HMW
615]
Length = 601
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 132/440 (30%), Positives = 213/440 (48%), Gaps = 56/440 (12%)
Query: 58 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSM--LPPWHVYER 115
++D+A +YTSGTTG PKGVML H L R ++DI + DK +SM LP HV+E+
Sbjct: 179 AEDLANILYTSGTTGEPKGVMLHHSCYLEAFR-IHDIRLVDMTDKDVSMNFLPLTHVFEK 237
Query: 116 ACGYFIFSRGIEL-MYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARR 174
A Y +G+++ + +++ ++ +P M SVP +E +Y+G+Q++I ++ ++
Sbjct: 238 AWTYLCVHKGVQVCINLRPADIQTTIKEIRPTLMCSVPRFWEKVYAGVQEKIAETTGIKK 297
Query: 175 VVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEK 234
++ I++ RI+ R K P ++ L + EK
Sbjct: 298 MLMLDAIKVG-------RIH-NLDYLRVGKTPPRMIQL---------------KYKFYEK 334
Query: 235 LVYKKIQSAIGISKAGV--SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTC 292
+Y ++ IGI + G ++P I F ++G+ + VGYGLTES+ ++ T
Sbjct: 335 TIYALLKKTIGIENGNFFPTAGAAVPDEICEFVHSVGIDMLVGYGLTESTATVSCTSKTG 394
Query: 293 NVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDG 352
+GSVG + E+KI E NE+L +RG + +GY+K AT A+DE+G
Sbjct: 395 YDIGSVGQVMPEVEVKI--GEDNEIL---------LRGKTITKGYYKKAEATAAAIDEEG 443
Query: 353 WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIR 412
W +TGD G+ G L L R KD S G+ + P LE + I
Sbjct: 444 WFHTGDAGYFK-----------NGQLYLTERIKDLFKTSNGKYIAPQALETKLVIDRYID 492
Query: 413 QIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSKC 472
QI +I ++ A+IVP V AK I + D +EL + I+ L+ R T +
Sbjct: 493 QIAIIADQRKFVSALIVPVYGFVKQYAKEKGIEYKDMAELLEHPKITALF-RARIDTLQQ 551
Query: 473 SF----QIGPIHVVDEPFTV 488
F QI ++ EPF++
Sbjct: 552 QFAHYEQIKRFTLLPEPFSM 571
>gi|423220287|ref|ZP_17206782.1| hypothetical protein HMPREF1061_03555 [Bacteroides caccae
CL03T12C61]
gi|392623364|gb|EIY17467.1| hypothetical protein HMPREF1061_03555 [Bacteroides caccae
CL03T12C61]
Length = 601
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 135/470 (28%), Positives = 222/470 (47%), Gaps = 60/470 (12%)
Query: 27 YDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLH 86
+DE + +G +D+ +AR E DD+A +YTSGTTG PKGVML H L
Sbjct: 154 FDEFMAMGEGL--PHNDTVEART----ERASYDDLANILYTSGTTGEPKGVMLHHSCYLE 207
Query: 87 QIRSLYD-IVPAENGDKFLSMLPPWHVYERACGYFIFSRGIEL-MYTAVRNLKDDLQRYQ 144
Q + D + + D ++ LP HV+E+A Y +G+++ + +++ ++ +
Sbjct: 208 QFHTHDDRLTTMSDKDVSMNFLPLTHVFEKAWCYLCIHKGVQICINLRPADIQTTIKEIR 267
Query: 145 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQK 204
P M SVP +E +Y+G+Q++I ++ ++ + I++ RI+ L R +
Sbjct: 268 PTLMCSVPRFWEKVYAGVQEKINETTGLKKALMLDAIKVG-------RIHNLDYLRRGKT 320
Query: 205 QPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV--SGGGSLPMHID 262
P ++ + + + EK +Y ++ IGI + G ++P I+
Sbjct: 321 PP-------------VMNQLKYKFY---EKTIYSLLKKTIGIENGNFFPTAGAAVPDEIN 364
Query: 263 LFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGS 322
F ++G+ + VGYGLTES+ ++ P +GSVG + E+KI E NE+L
Sbjct: 365 EFVHSVGINMVVGYGLTESTATVSCTLPVGYDIGSVGVVLPGVEVKI--GEDNEIL---- 418
Query: 323 KGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEG 382
+RG + +GY+K AT A+D DGW +TGD G+ G L L
Sbjct: 419 -----LRGKTITKGYYKKAEATAAAIDPDGWFHTGDAGYFK-----------NGQLFLTE 462
Query: 383 RAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRL 442
R KD S G+ + P LE + I QI +I ++ A+IVP V AK
Sbjct: 463 RIKDLFKTSNGKYIAPQALETKLVIDRYIDQIAIIADQRKFVSALIVPVYGYVKEYAKEK 522
Query: 443 SIVHADASELSKEKTISLLYGELRKWTSKCSF----QIGPIHVVDEPFTV 488
I + D +EL + I L+ R T + F QI ++ EPF++
Sbjct: 523 GIEYKDMAELLQHPKIVGLF-RARIETLQQQFAHYEQIKRFTLLPEPFSM 571
>gi|153809226|ref|ZP_01961894.1| hypothetical protein BACCAC_03537 [Bacteroides caccae ATCC 43185]
gi|149128202|gb|EDM19422.1| AMP-binding enzyme [Bacteroides caccae ATCC 43185]
Length = 601
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 135/470 (28%), Positives = 222/470 (47%), Gaps = 60/470 (12%)
Query: 27 YDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLH 86
+DE + +G +D+ +AR E DD+A +YTSGTTG PKGVML H L
Sbjct: 154 FDEFMAMGEGL--PHNDTVEART----ERASYDDLANILYTSGTTGEPKGVMLHHSCYLE 207
Query: 87 QIRSLYD-IVPAENGDKFLSMLPPWHVYERACGYFIFSRGIEL-MYTAVRNLKDDLQRYQ 144
Q + D + + D ++ LP HV+E+A Y +G+++ + +++ ++ +
Sbjct: 208 QFHTHDDRLTTMSDKDVSMNFLPLTHVFEKAWCYLCIHKGVQICINLRPADIQTTIKEIR 267
Query: 145 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQK 204
P M SVP +E +Y+G+Q++I ++ ++ + I++ RI+ L R +
Sbjct: 268 PTLMCSVPRFWEKVYAGVQEKINETTGLKKALMLDAIKVG-------RIHNLDYLRRGKT 320
Query: 205 QPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV--SGGGSLPMHID 262
P ++ + + + EK +Y ++ IGI + G ++P I+
Sbjct: 321 PP-------------VMNQLKYKFY---EKTIYSLLKKTIGIENGNFFPTAGAAVPDEIN 364
Query: 263 LFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGS 322
F ++G+ + VGYGLTES+ ++ P +GSVG + E+KI E NE+L
Sbjct: 365 EFVHSVGINMVVGYGLTESTATVSCTLPVGYDIGSVGVVLPGVEVKI--GEDNEIL---- 418
Query: 323 KGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEG 382
+RG + +GY+K AT A+D DGW +TGD G+ G L L
Sbjct: 419 -----LRGKTITKGYYKKTEATAAAIDPDGWFHTGDAGYFK-----------NGQLFLTE 462
Query: 383 RAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRL 442
R KD S G+ + P LE + I QI +I ++ A+IVP V AK
Sbjct: 463 RIKDLFKTSNGKYIAPQALETKLVIDRYIDQIAIIADQRKFVSALIVPVYGYVKEYAKEK 522
Query: 443 SIVHADASELSKEKTISLLYGELRKWTSKCSF----QIGPIHVVDEPFTV 488
I + D +EL + I L+ R T + F QI ++ EPF++
Sbjct: 523 GIEYKDMAELLQHPKIVGLF-RARIETLQQQFAHYEQIKRFTLLPEPFSM 571
>gi|296272883|ref|YP_003655514.1| AMP-dependent synthetase and ligase [Arcobacter nitrofigilis DSM
7299]
gi|296097057|gb|ADG93007.1| AMP-dependent synthetase and ligase [Arcobacter nitrofigilis DSM
7299]
Length = 573
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 132/457 (28%), Positives = 215/457 (47%), Gaps = 70/457 (15%)
Query: 19 VEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVM 78
++E ++ DEII +G+E R Y DDI + VYTSG TG+PKGV+
Sbjct: 137 IKEKNYYNLDEIIVMGKEICN--------RLEYVEHKPKEDDIFSIVYTSGNTGDPKGVI 188
Query: 79 LTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMY-TAVRNLK 137
L+HKN++ Q++ + +++ + + LS+LP H++ERA + SRG+ + + + N+
Sbjct: 189 LSHKNIISQVKDINELIQLDKKEVILSILPLAHIFERAVMSYYISRGVSIYFIDDITNVA 248
Query: 138 DDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGF 197
++ +P M VP + E +Y I+ I +++A SFA+ +
Sbjct: 249 TLMKTVRPTMMTVVPRLLEKIYYKIKTNISDKPFFSKLIA------SFAF--------HY 294
Query: 198 CLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGS 256
L N + S L L + KLVY K + G K VSGG
Sbjct: 295 ALKENINKDSILFKLFN-------------------KLVYSKFREIFGGRIKWLVSGGAP 335
Query: 257 LPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNE 316
L +I F+ I V + GYG+TE SPVI+ P N +G+ G + E+KI E +E
Sbjct: 336 LEKNIYQFFLNIEVPLYQGYGMTEFSPVISTNYPGANRVGTSGKAMPTAEVKI---ENDE 392
Query: 317 VLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGG 376
+L V+G +M+GY N TK+ +DE GWL+TGD+ I G
Sbjct: 393 LL---------VKGPSLMKGYLNNEELTKKTIDEKGWLHTGDVASIDE----------DG 433
Query: 377 VLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVL 436
+ ++ R KD STGE V + +E+ ++ I V+I +++ A++ D E
Sbjct: 434 YIYIQSRKKDIFKTSTGEYVNAIPIEQELSKNKYIEFAVLISSNRKYTTALLFVDHERYT 493
Query: 437 MAAKRLSIV---HADASELSK--EKTISLLYGELRKW 468
K ++ + + S + K + I L ++ KW
Sbjct: 494 QHEKSSNLTIDEYFNQSRIQKSIQNHIDRLNKKVNKW 530
>gi|254492052|ref|ZP_05105229.1| AMP-binding enzyme, putative [Methylophaga thiooxidans DMS010]
gi|224462749|gb|EEF79021.1| AMP-binding enzyme, putative [Methylophaga thiooxydans DMS010]
Length = 599
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 130/415 (31%), Positives = 201/415 (48%), Gaps = 59/415 (14%)
Query: 61 IATYVYTSGTTGNPKGVMLTHKNLLHQIR---SLYDIVPAENGDKFLSMLPPWHVYERAC 117
+A+ +YTSGTTG PKGVML+H N+L ++I P D FLS LP H ER
Sbjct: 184 LASIIYTSGTTGRPKGVMLSHHNMLSVAAGSLQYFEIFP---NDLFLSFLPLSHTLERTA 240
Query: 118 GYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 175
GY++ G + Y+ + L DD+Q +P +I+VP ++E +YS +Q Q+ + V
Sbjct: 241 GYYLPIMAGASVAYSRGIPQLADDMQMVKPTILIAVPRIFERIYSRLQAQL----DQKPV 296
Query: 176 VARALIRI--SFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAE 233
++R L ++ S ++ FK + + +P + L L
Sbjct: 297 ISRFLFQLTCSTGWSKFK-----YQQGKQGWRPGF------------------SLLPLLN 333
Query: 234 KLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTC 292
K+V +K+ +G + VSGG LP + +G+ + GYGLTE+SPVI+ P
Sbjct: 334 KIVAQKVHQRMGGQVRLAVSGGAPLPFQAAKLFIGLGLNLLQGYGLTETSPVISVNEPAN 393
Query: 293 NVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDG 352
N SVG I +KI D +E+L VRG M GY+ N AT QA++ +G
Sbjct: 394 NDPTSVGRAIPGVAVKIGD--NDELL---------VRGPGNMMGYWNNHKATAQAINAEG 442
Query: 353 WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIR 412
WL+TGD I + + + GR KD +VLS GE V P ++E A
Sbjct: 443 WLHTGDQAKIDDNDH----------IHITGRIKDILVLSNGEKVPPSDMESAIQSGEYFE 492
Query: 413 QIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRK 467
Q +++G+ + A+IV + ++ AK L + D S L + + +LR+
Sbjct: 493 QALIVGEGESYLSALIVLNTDKWFSLAKELGLDAMDNSSLESKNLHQFVIQKLRQ 547
>gi|170741077|ref|YP_001769732.1| AMP-dependent synthetase and ligase [Methylobacterium sp. 4-46]
gi|168195351|gb|ACA17298.1| AMP-dependent synthetase and ligase [Methylobacterium sp. 4-46]
Length = 612
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 133/388 (34%), Positives = 191/388 (49%), Gaps = 49/388 (12%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 118
D +AT +YTSGTTG PKGVML+H+NLL +++ D P + D FLS LP HV+ER G
Sbjct: 190 DALATIIYTSGTTGLPKGVMLSHRNLLSVAQAVLDRNPGSDRDVFLSYLPLAHVFERVVG 249
Query: 119 -YFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 176
Y G +++ +V +L DDL+ +P ++ VP + + L ++ T AAR
Sbjct: 250 CYLPLILGARVVFARSVEHLPDDLRVARPTILLVVPSLLDRL-----RRTVTERAARTAP 304
Query: 177 ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLV 236
R L+R + A R ++ F R+ + AR L L +A +
Sbjct: 305 TRWLLRAALA-----RGWDLFAARRDGCRLGL---------ARTAAGAL--LRAVAAAPI 348
Query: 237 YKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLG 296
+ + G + VSGG LP F +G+ + GYGLTE++ + + V G
Sbjct: 349 RRSLG---GRLRLAVSGGAPLPDETARFCLGLGLPLVEGYGLTEAASAVTGFQVGRTVPG 405
Query: 297 SVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNT 356
SVG P+ E++I D T E+L VR VM GY++ P T Q L GWL T
Sbjct: 406 SVGPPLPGMEVRIAD--TGEIL---------VRSPGVMIGYWRRPDLTAQVL-HGGWLYT 453
Query: 357 GDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVV 416
GD+G + GG L + GR K+ IVLSTGE V P +E A R L RQ +
Sbjct: 454 GDLGVLR-----------GGCLYVAGRKKEMIVLSTGEKVSPEAVEAAITRDPLFRQAMA 502
Query: 417 IGQDQRRPGAIIVPDKEEVLMAAKRLSI 444
+G+ Q R + V D+ A+RL +
Sbjct: 503 VGEGQSRLTVLAVVDEAAWAPLARRLGL 530
>gi|407939119|ref|YP_006854760.1| AMP-dependent synthetase and ligase [Acidovorax sp. KKS102]
gi|407896913|gb|AFU46122.1| AMP-dependent synthetase and ligase [Acidovorax sp. KKS102]
Length = 618
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 127/436 (29%), Positives = 211/436 (48%), Gaps = 43/436 (9%)
Query: 58 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERAC 117
+DD+A VYTSGTTG PKGVMLTH+N++ ++++ + + D FLS LP H +ER
Sbjct: 188 ADDLAAIVYTSGTTGKPKGVMLTHRNVVSDVKAVLERIAPTVDDVFLSFLPLSHTFERTG 247
Query: 118 GYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 175
GY++ + G + Y +V L +DL+ +P ++SVP +YE +++ + +++ +
Sbjct: 248 GYYLPIAAGSCVAYARSVAQLAEDLKTIRPTVLVSVPRIYERIHAKLIEKLSPTP----- 302
Query: 176 VARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWP-LHLLAEK 234
++ A + + FC + P+ + W + A+ WP LH L K
Sbjct: 303 -----WKMQLYEAAQNKGWARFCAAQRLPAPTPDASSQAAGW---MAALPWPVLHALVAK 354
Query: 235 LVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNV 294
+ + G + VSGG L I + +G+ + GYG+TE++PV++ N
Sbjct: 355 PLLAQFG---GRVRVAVSGGAPLSPTIAKCFLGLGLPLIQGYGMTETAPVVSVNALDDND 411
Query: 295 LGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWL 354
VG + E++I G ++VRG VM+GY+K P T + L DGWL
Sbjct: 412 PACVGKALPGVEVRI-----------GDNHELQVRGPIVMKGYWKRPEDTAKILSPDGWL 460
Query: 355 NTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQI 414
TGD ++ G + ++GR K+ IV STGE V P +LE A L L+ Q
Sbjct: 461 GTGD-----------QADIVNGRIYIKGRIKEIIVTSTGEKVPPGDLELALLADPLLEQA 509
Query: 415 VVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSKCSF 474
V+G+++ + V + E A L + A L+ + + K T+ +
Sbjct: 510 FVVGENRPFIACVAVLNAGEWPRLAADLGLNPQAADSLNHPSVHRAVLARIEKNTASFAR 569
Query: 475 QIGP--IHVVDEPFTV 488
P +H+ EP+T+
Sbjct: 570 YAVPRTVHLTLEPWTI 585
>gi|424034170|ref|ZP_17773577.1| AMP-binding enzyme family protein [Vibrio cholerae HENC-01]
gi|408873321|gb|EKM12519.1| AMP-binding enzyme family protein [Vibrio cholerae HENC-01]
Length = 602
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 132/445 (29%), Positives = 211/445 (47%), Gaps = 55/445 (12%)
Query: 44 SNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKF 103
S+ A + E +D+ T +YTSGTTG PKGVML + N+ Q+ + + D
Sbjct: 163 SHQAELETRLEHAQEEDLLTLIYTSGTTGQPKGVMLDYANISAQLEGHDERLSLTEDDVS 222
Query: 104 LSMLPPWHVYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLYSGI 162
L LP HV+ERA +++ +G Y ++D L +P M +VP YE ++S I
Sbjct: 223 LCFLPLSHVFERAWTFYVLYKGGTNCYLQDTMQVRDALSEVRPTVMSAVPRFYEKIFSAI 282
Query: 163 QKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIIC 222
+++ + R+++ + + A C N+K PS +
Sbjct: 283 HEKVSRAPFHRKIMFTWAVNMGAKMAA--------CHQENRK-PSLM------------- 320
Query: 223 AILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTES 281
L + LA+KLV K+++ +G + GG L I F+ AIG+ V++GYG+TE+
Sbjct: 321 --LRKSYALADKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTET 378
Query: 282 SPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNP 341
+ ++ C S+G + ++KI E NE+L VRG VM+GY+K P
Sbjct: 379 TATVSCWDDQCFDPSSIGMAMPGAQVKI--GENNEIL---------VRGPMVMRGYYKMP 427
Query: 342 SATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLEL 401
T++ DE G+L TGD G+I + G L + R K+ + S G+ + P +
Sbjct: 428 EETEKTFDEHGFLKTGDAGYIDEN----------GNLFITDRIKELMKTSNGKYIAPQVV 477
Query: 402 EEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK------- 454
E A + I QI VI ++ A+IVP + + AK L+I + D EL K
Sbjct: 478 EGAIGKDHFIEQIAVIADTRKFVSALIVPCYDSLEEYAKELNIKYHDRVELIKHHQIVEM 537
Query: 455 -EKTISLLYGELRKWTSKCSFQIGP 478
EK ++ L EL K+ F++ P
Sbjct: 538 LEKRVNDLQKELAKFEQVKKFKLLP 562
>gi|227488400|ref|ZP_03918716.1| possible long-chain-fatty-acid--CoA ligase [Corynebacterium
glucuronolyticum ATCC 51867]
gi|227543012|ref|ZP_03973061.1| possible long-chain-fatty-acid--CoA ligase [Corynebacterium
glucuronolyticum ATCC 51866]
gi|227091614|gb|EEI26926.1| possible long-chain-fatty-acid--CoA ligase [Corynebacterium
glucuronolyticum ATCC 51867]
gi|227181234|gb|EEI62206.1| possible long-chain-fatty-acid--CoA ligase [Corynebacterium
glucuronolyticum ATCC 51866]
Length = 612
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 127/400 (31%), Positives = 194/400 (48%), Gaps = 52/400 (13%)
Query: 43 DSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVP----AE 98
D +D + T SDD+A+ VYTSGTTG PKG MLTH N L Q+ L P A
Sbjct: 172 DISDDEVWERIRTTSSDDLASIVYTSGTTGRPKGCMLTHHNWLAQVLGLL-THPIGQIAR 230
Query: 99 NGDKFLSMLPPWHVYERACGY-FIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYET 157
G+ ++ LP HV RA F+ S G + ++ + + +LQR +P+ ++ VP V+E
Sbjct: 231 PGNSMVTFLPLAHVLARAVSLAFVVSGGTQSHWSNFKTISVELQRNRPNLILGVPRVFEK 290
Query: 158 LYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLW 217
+ ++AA + R I+ + A + + + PS + +
Sbjct: 291 V---------RNAAANNALDRGPIQAATFAKAEQVAIDYSKAMDEEDGPSRRLEM----- 336
Query: 218 ARIICAILWPLHLLAEKLVYKKIQSAIG-ISKAGVSGGGSLPMHIDLFYEAIGVKVQVGY 276
H + EKL+YKKI+SAIG +SGG ++ + F+ IG+ V GY
Sbjct: 337 ----------QHSIFEKLIYKKIRSAIGGACNYAISGGSAMSHDLLHFFRGIGIPVYEGY 386
Query: 277 GLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQG 336
GLTE + A NV+G+VG P+ +KI D G + +RG Q+ G
Sbjct: 387 GLTEVAAAAAVNFGKDNVIGTVGQPVGGMAVKIND-----------DGEICLRGEQLFTG 435
Query: 337 YFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENV 396
Y++N AT +A D +G+ NTGD+G + G +V+ GR KD IV + G+NV
Sbjct: 436 YWQNDIATAEAFDSEGYFNTGDLGELLDT----------GHIVITGRKKDLIVTAGGKNV 485
Query: 397 EPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVL 436
P LE+ LI Q +V+G + +I D++ +L
Sbjct: 486 SPGPLEDKLRAHPLISQALVVGDGKPFIAVLIALDEDAML 525
>gi|384261959|ref|YP_005417145.1| AMP-dependent synthetase and ligase [Rhodospirillum photometricum
DSM 122]
gi|378403059|emb|CCG08175.1| AMP-dependent synthetase and ligase [Rhodospirillum photometricum
DSM 122]
Length = 607
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 145/467 (31%), Positives = 220/467 (47%), Gaps = 69/467 (14%)
Query: 22 IPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTH 81
+PV S++ ++ G E R+ S ++ R ++D+A ++TSGT G PKGVML+H
Sbjct: 158 VPVESWNALLAQG-EGREVPSTAHRIR---------ANDLAVIIHTSGTGGAPKGVMLSH 207
Query: 82 KNLLHQIRSLYDIVP--AENGDKFLSMLPPWHVYERACG-YFIFSRGIELMYT-AVRNLK 137
+ +LH +D++ + + FLS LP H YE G +F G E+ + V L
Sbjct: 208 RAILHNCMGAHDLLATIGLSHEIFLSFLPLSHSYEHTTGLFFPICLGAEVYFAEGVETLS 267
Query: 138 DDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGF 197
++ +P M +VP +YE + + + +QI + K Y+
Sbjct: 268 ANMLEARPTIMTAVPRLYEMMRARLLRQIEKEDGFKS----------------KLFYQAV 311
Query: 198 CL-TRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGG 255
L +R + P+ L W RI L + LV +K+ G KA VSGGG
Sbjct: 312 ELGSRRLQDPAGL----SWR-ERITDGAL-------DYLVRRKVSQRFGGRLKAMVSGGG 359
Query: 256 SLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETN 315
L + LF+ A+GV V GYGLTE++PV++ P +GSVG + E++I
Sbjct: 360 PLSPEVGLFFRALGVPVLQGYGLTEAAPVVSCNLPCRVKIGSVGPALKDVEVRI------ 413
Query: 316 EVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCG 375
G G + VRG VM GY+ +P AT ALD +GWL+TGD+G I
Sbjct: 414 -----GLDGELLVRGPLVMDGYWNDPDATAHALDGEGWLHTGDVGEI----------DAD 458
Query: 376 GVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 435
G + + R KD IV S G+N+ P +E I Q+VV G A+IVPD+E +
Sbjct: 459 GDIRITDRKKDIIVNSGGDNISPQRVEGILSLEPEIGQVVVFGDRMPHLVALIVPDREFL 518
Query: 436 LMAAKRLSIVHADASELSKEKTISLLYGELRKWTSKCSFQIGPIHVV 482
L R S + +LS +L L + + + ++ PI V
Sbjct: 519 L----RWSRETGRSDDLSLAANDPVLRLALARAVDRANARLSPIERV 561
>gi|422911306|ref|ZP_16945932.1| AMP-binding enzyme family protein [Vibrio cholerae HE-09]
gi|341631825|gb|EGS56702.1| AMP-binding enzyme family protein [Vibrio cholerae HE-09]
Length = 601
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 134/435 (30%), Positives = 207/435 (47%), Gaps = 55/435 (12%)
Query: 54 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 113
E DD+ T +YTSGTTG PKGVML ++N+ Q+ + D L LP HV+
Sbjct: 173 EQANYDDLFTLIYTSGTTGTPKGVMLDYRNIGAQLEGHDQRLNLTQEDVSLCFLPLSHVF 232
Query: 114 ERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAA 172
ERA ++ RG Y V ++++ L +P M +VP YE ++S I +++ +
Sbjct: 233 ERAWTAYVLYRGATNCYLQDVAHVREALAEVRPTVMCAVPRFYEKIFSAIHEKVAKAPLV 292
Query: 173 RRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLA 232
R+V+ F + C + Q+QPS++ L H LA
Sbjct: 293 RKVL--------FTWAVNMGAKMAVC-RQQQRQPSWM---------------LKQSHQLA 328
Query: 233 EKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPT 291
+KLV K+++ +G K GG L I F+ AIG+ V++GYG+TE++ ++
Sbjct: 329 DKLVLSKLRALLGGRIKFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTATVSCWDDH 388
Query: 292 CNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDED 351
C S+G + ++KI E NE+L VRG VM+GY+K T ++ DE
Sbjct: 389 CFNPDSIGLSMPGAQVKI--GENNEIL---------VRGPMVMRGYYKLDKETAESFDEH 437
Query: 352 GWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLI 411
G+L TGD G I + G L + R K+ + S G+ + P +E A + I
Sbjct: 438 GFLKTGDAGHIDEN----------GNLFITDRIKELMKTSGGKYIAPQVIEGAIGKDHFI 487
Query: 412 RQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLLYG 463
QI VI ++ A+IVP + + AK L+I + D EL K EK ++ L
Sbjct: 488 EQIAVIADTRKFVSALIVPCYDSLEEYAKELNIKYHDRLELIKHSQVLEMFEKRVNDLQK 547
Query: 464 ELRKWTSKCSFQIGP 478
EL K+ F++ P
Sbjct: 548 ELAKFEQVKKFRLLP 562
>gi|77164343|ref|YP_342868.1| AMP-dependent synthetase and ligase [Nitrosococcus oceani ATCC
19707]
gi|254434511|ref|ZP_05048019.1| AMP-binding enzyme, putative [Nitrosococcus oceani AFC27]
gi|76882657|gb|ABA57338.1| AMP-dependent synthetase and ligase [Nitrosococcus oceani ATCC
19707]
gi|207090844|gb|EDZ68115.1| AMP-binding enzyme, putative [Nitrosococcus oceani AFC27]
Length = 601
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 135/401 (33%), Positives = 203/401 (50%), Gaps = 51/401 (12%)
Query: 47 ARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSM 106
A KHY + D +AT VYTSGTTG PKGVML+H N+L S P D FLS
Sbjct: 172 ADKHYP-KLNNPDALATIVYTSGTTGLPKGVMLSHHNILWNAHSSLQSTPIYEDDLFLSF 230
Query: 107 LPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQK 164
LP H ER GY++ G ++ YT ++ L +DL +P ++SVP ++E +++
Sbjct: 231 LPLSHSLERTLGYYLPMMAGAQVAYTRSIAKLAEDLVTIKPTVLVSVPRIFERVHN---- 286
Query: 165 QIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAI 224
QI+ + ++ RAL +++ A G+ +Q +Y W +C
Sbjct: 287 QIYDKLREKTLLERALFKLAIA--------AGW------RQFNYQQGRAPW---HPLCL- 328
Query: 225 LWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSP 283
L+ L ++V +++ + G + V GG L ++ A+G+ + GYGLTE+SP
Sbjct: 329 ---LNPLLRQIVGRQVLAQFGGRLRIVVCGGAPLVFNVARELLALGLPLIQGYGLTEASP 385
Query: 284 VIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSA 343
VI+ N SVG P+ EI+I E NE+L R VM GY+ NP A
Sbjct: 386 VISGNSLNNNDPKSVGTPLQDVEIRI--GEHNELLG---------RSPGVMLGYWNNPKA 434
Query: 344 TKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEE 403
T + +DE+GWL+TGD ++R G L + GR K+ IVL+TGE V P E+E
Sbjct: 435 TAEVIDEEGWLHTGD-----------QARIEQGRLYITGRIKEIIVLATGEKVPPGEMET 483
Query: 404 AALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI 444
A L Q +V+G+ + A+IV + E A+ L++
Sbjct: 484 AIGTDPLFDQAMVVGEGKPYLSALIVVNPEHWNTLAQELNL 524
>gi|388600371|ref|ZP_10158767.1| hypothetical protein VcamD_10774 [Vibrio campbellii DS40M4]
Length = 602
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 132/447 (29%), Positives = 212/447 (47%), Gaps = 55/447 (12%)
Query: 42 SDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGD 101
+S A + E DD+ T +YTSGTTG PKGVML + N+ Q+ + D
Sbjct: 161 DNSQHAELEVRLEQAQEDDLLTLIYTSGTTGQPKGVMLDYANISAQLEGHDQRLSLTEDD 220
Query: 102 KFLSMLPPWHVYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLYS 160
L LP HV+ERA +++ +G Y ++D L +P M +VP YE ++S
Sbjct: 221 VSLCFLPLSHVFERAWTFYVLYKGGTNCYLQDTMQVRDALSEVRPTVMSAVPRFYEKIFS 280
Query: 161 GIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARI 220
I +++ + R+++ + + A + EG ++PS +
Sbjct: 281 AIHEKVSRAPVHRKIMFTWAVNMGAKMAACHQ--EG-------RKPSLM----------- 320
Query: 221 ICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLT 279
L + LA+KLV K+++ +G + GG L I F+ AIG+ V++GYG+T
Sbjct: 321 ----LRKSYALADKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGMT 376
Query: 280 ESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFK 339
E++ ++ C S+G + ++KI E+NE+L VRG VM+GY+K
Sbjct: 377 ETTATVSCWDDQCFDPSSIGMAMPGVQVKI--GESNEIL---------VRGPMVMRGYYK 425
Query: 340 NPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPL 399
P T++ DE G+L TGD G+I + G L + R K+ + S G+ + P
Sbjct: 426 MPEETEKTFDEHGFLKTGDAGYIDEN----------GNLFITDRIKELMKTSNGKYIAPQ 475
Query: 400 ELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK----- 454
+E A + I QI VI ++ A+IVP + + AK L+I + D EL K
Sbjct: 476 VVEGAIGKDHFIEQIAVIADTRKFVSALIVPCYDSLEEYAKELNIKYHDRVELIKHHQIV 535
Query: 455 ---EKTISLLYGELRKWTSKCSFQIGP 478
EK ++ L EL K+ F++ P
Sbjct: 536 EMLEKRVNDLQKELAKFEQVKKFKLLP 562
>gi|387774023|ref|ZP_10129303.1| AMP-binding enzyme [Haemophilus parahaemolyticus HK385]
gi|386903110|gb|EIJ67930.1| AMP-binding enzyme [Haemophilus parahaemolyticus HK385]
Length = 591
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 129/407 (31%), Positives = 197/407 (48%), Gaps = 53/407 (13%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 118
DD+ T +YTSGTTG+PKGVML + NL HQ++S + D LS LP H++ERA
Sbjct: 176 DDLFTLIYTSGTTGDPKGVMLDYANLAHQLQSHDQALNISEQDISLSFLPLSHIFERAWV 235
Query: 119 YFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 177
+IF RG Y ++ L +P M +VP YE +Y+ + ++ + RR +
Sbjct: 236 AYIFHRGTTNCYLENTDQIRQALVETKPTVMCAVPRFYEKIYAAVLDKVEKAPFIRRTL- 294
Query: 178 RALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWL-WARIICAILWPLHLLAEKLV 236
+A A ++ Y+ +PS WL W H A+KLV
Sbjct: 295 -----FHWAIQAGEKHYQS-------AKPS------RWLKWQ----------HKWADKLV 326
Query: 237 YKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVL 295
K+++ +G + GG L I F+ ++GV V++GYG+TE++ ++
Sbjct: 327 LSKLRALLGGQVRMMPCGGAKLEPTIGKFFHSLGVNVKLGYGMTETTATVSCWEDHGFNP 386
Query: 296 GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLN 355
S+G + +TE+KI E NE+L VRG VM+GY+K P T A EDG+L
Sbjct: 387 NSIGKLMPNTEVKI--GENNEIL---------VRGGMVMRGYYKKPEETANAFTEDGFLK 435
Query: 356 TGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIV 415
TGD G I H G L + R K+ + S G+ + P +E + I QI
Sbjct: 436 TGDAGEIDEH----------GNLHITDRIKELMKTSNGKYIAPQYIEGKIGKDKFIEQIA 485
Query: 416 VIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLY 462
+I ++ A+IVP + + AK+L+I + D EL K I ++
Sbjct: 486 IIADAKKYVSALIVPCFDSLEEYAKQLNIKYQDRLELIKHAEIIQMF 532
>gi|34499506|ref|NP_903721.1| long chain fatty-acid CoA ligase [Chromobacterium violaceum ATCC
12472]
gi|34105356|gb|AAQ61711.1| probable long chain fatty-acid CoA ligase [Chromobacterium
violaceum ATCC 12472]
Length = 587
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 141/472 (29%), Positives = 222/472 (47%), Gaps = 67/472 (14%)
Query: 26 SYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLL 85
S+ EI + R R A D+ + + +DD+ T +YTSGTTG KGVML+H+N+L
Sbjct: 142 SWREIAERARPERMAELDA-------LRDAVRADDVYTIIYTSGTTGRSKGVMLSHRNVL 194
Query: 86 HQIRSLYDIVPAENGD-KFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQ 144
+ + G + LS LP H++ERA ++ G + + +V L L +
Sbjct: 195 STVVATAAFTGLPQGRCRALSFLPLSHIFERAGVFYYLYSGTGIYFASVECLSSALADVK 254
Query: 145 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQK 204
PH SVP V E ++ + + + A+R RIY+ + L R +
Sbjct: 255 PHTFSSVPRVLEKVHEKLVGKARDLTGAKR-----------------RIYQ-WALARAEN 296
Query: 205 -QPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVS-GGGSLPMHID 262
P+ + +D + H LA+KLVY K ++A+G ++ G +L +
Sbjct: 297 FDPNRRRSPLDAI-----------QHALADKLVYSKWRAAMGGELISINVGSAALQPRLA 345
Query: 263 LFYEAIGVKVQVGYGLTESSPVIAARRPTCN--VLGSVGHPINHTEIKIVDAETNEVLPA 320
+ A G+ V GYG+TESSPVI+A T +GSVG P+ E+++ D
Sbjct: 346 RMFWAAGIAVAEGYGMTESSPVISANPFTARGVRIGSVGLPLPGVEVRLAD--------- 396
Query: 321 GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVL 380
G + VRG VM GY+K P T AL DGWL+TGDIG + G L +
Sbjct: 397 --DGEILVRGDNVMSGYYKEPEQTSDAL-RDGWLHTGDIGVLE-----------DGYLRI 442
Query: 381 EGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAK 440
R K+ S G+ + P LE S+ I QI+V+G Q+ A+IVP E++
Sbjct: 443 TDRKKEMFKTSNGKYIAPQALENKLKESAFIDQIMVVGDGQKYAAALIVPLFEKLKEWCA 502
Query: 441 RLSIVHADASELSKE-KTISLLYGELRKWTSKCSF--QIGPIHVVDEPFTVN 489
I + E+S+ K + L+ E++++ I ++D+P+ V+
Sbjct: 503 EHGISYTTDCEMSRHPKVVELIDREVKRFNRYFGSWEHIKKFSLLDKPWCVD 554
>gi|387128044|ref|YP_006296649.1| long-chain-fatty-acid--CoA ligase [Methylophaga sp. JAM1]
gi|386275106|gb|AFI85004.1| Long-chain-fatty-acid--CoA ligase [Methylophaga sp. JAM1]
Length = 604
Score = 175 bits (443), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 148/499 (29%), Positives = 233/499 (46%), Gaps = 74/499 (14%)
Query: 8 WGKKSSVAPD--IVEEIPVFSYDEIIDLGRESRKAFSDSND--ARKHYKYETIGSDDIAT 63
W +V P+ V+ I +F +DE I S + + D + + +A+
Sbjct: 129 WSAIKAVLPEEHAVKRIVLF-HDESITDNESSMTSLQNWLDTASAAELNLPHCAPEQLAS 187
Query: 64 YVYTSGTTGNPKGVMLTHKNLL---HQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF 120
+YTSGTTG KGVML+H N+L + ++I+P D FLS LP H ER GY+
Sbjct: 188 IIYTSGTTGRSKGVMLSHHNMLSVAYGSLQFFEILP---DDVFLSFLPLSHTLERTGGYY 244
Query: 121 ---------IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSA 171
+FSR I L L DD+++ QP MI+VP ++E +Y + KQ+ S
Sbjct: 245 LPMMAGSKVVFSRSIPL-------LADDMRQVQPTIMIAVPRIFERIYDRVHKQLAEGSW 297
Query: 172 ARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLL 231
+R + + + + +KR F + +K S + L LL
Sbjct: 298 LKRRIFKLAVEV-----GWKR----FQYQQGRKYWSPSLLLW---------------PLL 333
Query: 232 AEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPT 291
+ +V K Q G + VSGG +LP+H + + + + GYGLTE+SPVI+ P+
Sbjct: 334 YKLVVTKFHQRLGGKLRLAVSGGAALPVHAAKMFIGLDLVLLQGYGLTETSPVISVNEPS 393
Query: 292 CNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDED 351
N SVG I E++I G ++V+G M GY+ N AT Q +D D
Sbjct: 394 SNDPASVGRAIQGVEVRI-----------GKDEELEVKGPGNMLGYWNNHKATAQTIDAD 442
Query: 352 GWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLI 411
GWL+TGD I+ G + + GR KD +VL+ GE V P ++E A + + LI
Sbjct: 443 GWLHTGDKAHISE----------SGHIYIVGRIKDILVLNNGEKVPPADIEAAIVSNGLI 492
Query: 412 RQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSK 471
Q +V+G+ Q A++V + E A++L + L + LR+W +
Sbjct: 493 DQALVVGEGQPYLAALLVINGESWPQIAQQLGLDPLQNESLGSKVLQQHFVRLLRQWLFE 552
Query: 472 --CSFQIGPIHVVDEPFTV 488
+I +H+ +P+T+
Sbjct: 553 FPAYARIRRVHLTLQPWTI 571
>gi|238918664|ref|YP_002932178.1| AMP-binding enzyme [Edwardsiella ictaluri 93-146]
gi|238868232|gb|ACR67943.1| AMP-binding enzyme [Edwardsiella ictaluri 93-146]
Length = 603
Score = 175 bits (443), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 121/409 (29%), Positives = 203/409 (49%), Gaps = 49/409 (11%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDI-VPAENGDKFLSMLPPWHVYERAC 117
DD+ T +YTSGTTG PKGVML ++NL Q+ L+D + D L LP HV+ERA
Sbjct: 183 DDLFTLIYTSGTTGEPKGVMLDYRNLAAQL-YLHDARLNVSEQDVSLCFLPLSHVFERAW 241
Query: 118 GYFIFSRGIELMYTAVRNL-KDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 176
+++ G + +Y NL ++ +Q +P M +VP YE ++S +Q ++ + RR +
Sbjct: 242 SFYVMHSGAQNVYLHDTNLVREAMQAVRPTMMCAVPRFYEKIFSAVQARVAQAPWLRRQL 301
Query: 177 ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLV 236
+A K+ + + R+Q R++ A +H LA++LV
Sbjct: 302 ------FHWALWCGKQRFLNERVGRSQ--------------GRLMTA----MHRLADRLV 337
Query: 237 YKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVL 295
K+++ +G + + G L H+ LF++A+G+ ++ GYG+TE+ ++
Sbjct: 338 LSKLRAILGGRVRFLPAAGAKLDDHVILFFQALGLNIKYGYGMTETCATVSCWEEQGFRF 397
Query: 296 GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLN 355
GS+G P+ E++I E+NE+ +VRG VM+GYF P T Q DGWL
Sbjct: 398 GSIGRPLPGVEVRI--GESNEI---------QVRGPIVMRGYFNKPQETAQTFTADGWLK 446
Query: 356 TGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIV 415
TGD G + G L + R KD + S G+ + P +E R I+Q+
Sbjct: 447 TGDAGALDAQ----------GHLFITERLKDLMKTSNGKYIAPQLVEGTLARDRFIKQVA 496
Query: 416 VIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGE 464
VI ++ A+IVP + + A+ +++ + D +L + I L+ +
Sbjct: 497 VIADARKFVSALIVPCFDSLEEYARSINLKYHDRLDLLRHSHIVALFEQ 545
>gi|108805260|ref|YP_645197.1| AMP-dependent synthetase and ligase [Rubrobacter xylanophilus DSM
9941]
gi|108766503|gb|ABG05385.1| AMP-dependent synthetase and ligase [Rubrobacter xylanophilus DSM
9941]
Length = 612
Score = 175 bits (443), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 128/415 (30%), Positives = 204/415 (49%), Gaps = 56/415 (13%)
Query: 24 VFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKN 83
V ++ E+ G SR D + ++ +D+AT +YTSGT+G KGV+LTH N
Sbjct: 160 VLAFSEVERRGARSR-------DPGWEARMLSLRREDVATLIYTSGTSGRQKGVILTHGN 212
Query: 84 LLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFI--FSRGIELMYTAVRNLKDDLQ 141
LL + ++ ++VP + D LS+LP HV ER C F+ G + +V ++++L
Sbjct: 213 LLSNLEAIIEVVPITDDDVGLSILPLSHVLERTCSQFLNLVGGGTNYIAESVEKVQENLL 272
Query: 142 RYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTR 201
+P ++ VP ++E +++ I++Q T++ R + + +R + E L R
Sbjct: 273 EVRPTALLVVPRLFERVFAVIREQ-GTANPVRARIFESAVRTARRKYRHDAGEEAMSLAR 331
Query: 202 NQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMH 260
+L+ L+ L LVY+K+++ +G + VSGG L
Sbjct: 332 R---------------------LLFGLYDL---LVYRKVRAGLGGRVRFCVSGGARLEPW 367
Query: 261 IDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA 320
+ F+ GV V GYGLTE+SPVI+ R G+VG P+ + E+++
Sbjct: 368 LGEFFYGAGVPVAEGYGLTETSPVISVNRFEDLRFGTVGPPLPNVEVRL----------- 416
Query: 321 GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVL 380
+G + VRG V GY P A +DG+ TGDIG S GG L +
Sbjct: 417 SGEGEILVRGPSVTPGYHNLPEENAAAFTQDGFFRTGDIG----------SFDEGGRLKI 466
Query: 381 EGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 435
RAKD +VL TG+NV P +E A ++ I Q +++G ++ A+IVPD E V
Sbjct: 467 TDRAKDIMVLDTGKNVAPQPVETALANTAHIAQAMLVGDGRKFVSALIVPDFEAV 521
>gi|375264373|ref|YP_005021816.1| long-chain-fatty-acid-CoA ligase [Vibrio sp. EJY3]
gi|369839697|gb|AEX20841.1| long-chain-fatty-acid-CoA ligase [Vibrio sp. EJY3]
Length = 599
Score = 175 bits (443), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 137/465 (29%), Positives = 217/465 (46%), Gaps = 62/465 (13%)
Query: 24 VFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKN 83
V S+ + I G S + + DAR E DD+ T +YTSGTTG PKGVML + N
Sbjct: 150 VASWKDFIAKGNSS---YQEELDARVAQACE----DDLLTLIYTSGTTGQPKGVMLDYAN 202
Query: 84 LLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQR 142
+ Q+ + D L LP HV+ERA +++ +G Y ++D L +
Sbjct: 203 IAAQLEGHDKRLSLTQDDVSLCFLPLSHVFERAWTFYVLYKGATNCYLKDTAQVRDALSQ 262
Query: 143 YQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRN 202
+P M +VP YE ++S I +++ + R+++ F + C +
Sbjct: 263 VRPTVMCAVPRFYEKIFSAIHEKVSRAPIHRKIM--------FTWAVNMGAKMALC-HQE 313
Query: 203 QKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHI 261
++QPS + L H LA+KLV K+++ +G + GG L I
Sbjct: 314 KRQPSIM---------------LRKAHALADKLVLSKLRALLGGRINFMPCGGAKLDETI 358
Query: 262 DLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAG 321
F+ A+G+ V++GYG+TE++ ++ C S+G + ++KI NE+L
Sbjct: 359 GRFFHAMGINVKLGYGMTETTATVSCWDDYCFDPDSIGTSMPGAQVKI--GANNEIL--- 413
Query: 322 SKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLE 381
VRG VM+GY+K P T++ DE G+L TGD G I + G L +
Sbjct: 414 ------VRGPMVMRGYYKMPEETEKTFDEHGFLKTGDAGHIDEN----------GNLFIT 457
Query: 382 GRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKR 441
R K+ + S G+ + P +E A + I QI VI ++ A+IVP + + AK
Sbjct: 458 DRIKELMKTSGGKYIAPQMIEGAIGKDHFIEQIAVIADTRKFVSALIVPCFDSLEEYAKE 517
Query: 442 LSIVHADASELSK--------EKTISLLYGELRKWTSKCSFQIGP 478
L+I + D EL K EK ++ L EL K+ F++ P
Sbjct: 518 LNIAYHDRVELIKHHQVVEMLEKRVNELQKELAKFEQVKKFKLLP 562
>gi|238760082|ref|ZP_04621232.1| long-chain-fatty-acid--CoA ligase [Yersinia aldovae ATCC 35236]
gi|238701701|gb|EEP94268.1| long-chain-fatty-acid--CoA ligase [Yersinia aldovae ATCC 35236]
Length = 599
Score = 175 bits (443), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 136/489 (27%), Positives = 235/489 (48%), Gaps = 59/489 (12%)
Query: 13 SVAPDIVEEIPVFSYDEIIDLGRESRKA-FSDSNDARKHY----KYETIGSDDIATYVYT 67
S+ P +V+ I + S ++ G A F ++A + + + E+ DD+ T +YT
Sbjct: 129 SLCPQLVQIIALESSVDLRGCGYAQHLADFEQQSNAVQLHLLTSRIESCDLDDLFTLIYT 188
Query: 68 SGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIE 127
SGTTG PKGVML ++N+ Q+ + D L LP HV+ERA ++ G +
Sbjct: 189 SGTTGEPKGVMLDYRNMAAQLYLHDQRLTLTAQDVSLCFLPLSHVFERAWSCYVMHTGAQ 248
Query: 128 LMYTAVRN---LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRIS 184
+Y +R+ ++ +Q +P M +VP YE ++S I ++ + RR++ R
Sbjct: 249 NVY--IRDTDWVRPAMQAVKPTVMCAVPRFYEKVFSAINDKVALAKWHRRMLFR------ 300
Query: 185 FAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAI 244
+A +R ++ CL R QK PS L L+ H LA++LV K+++ +
Sbjct: 301 WAVGRGERKFQ--CLQRGQK-PSLLSGLV---------------HKLADRLVLSKLRAVL 342
Query: 245 GISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPIN 303
G + + G L +I LF++AIGV ++ GYG+TE+ ++ GS+G P+
Sbjct: 343 GGRVRFLPAAGARLDDNIILFFQAIGVNIKYGYGMTETCATVSCWEENDFRFGSIGKPLP 402
Query: 304 HTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIA 363
++++ G++ ++VRG VM+GYF P T ++ +DGWL TGD G +
Sbjct: 403 GIDVRL-----------GAENEIQVRGPIVMRGYFNKPQETAESFTDDGWLKTGDAGVLD 451
Query: 364 PHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRR 423
G L + R KD + S G+ + P LE + I QI VI ++
Sbjct: 452 AQ----------GNLFITERLKDLMKTSGGKYIAPQMLEGTLGQDRFIEQIAVIADTRKF 501
Query: 424 PGAIIVPDKEEVLMAAKRLSI-VHADASELSKEKTISLLYGELRKWTSKCSF--QIGPIH 480
A+IVP E + A+ +++ H+ L +SL L++ + + Q+
Sbjct: 502 VSALIVPCFESLEEYARSINLKYHSRLELLRHSHIVSLFEQRLKEMQKELALFEQVKRFT 561
Query: 481 VVDEPFTVN 489
++ + FT+
Sbjct: 562 LLPQAFTME 570
>gi|424842397|ref|ZP_18267022.1| AMP-forming long-chain acyl-CoA synthetase [Saprospira grandis DSM
2844]
gi|395320595|gb|EJF53516.1| AMP-forming long-chain acyl-CoA synthetase [Saprospira grandis DSM
2844]
Length = 607
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 119/436 (27%), Positives = 213/436 (48%), Gaps = 45/436 (10%)
Query: 54 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 113
+ I ++D+AT +YTSGTTG PKGVML+H N+ +R + +P + D LS LP HV+
Sbjct: 175 DKIKAEDLATIIYTSGTTGKPKGVMLSHNNIATNVRDVLPFIPLQPQDIALSFLPICHVF 234
Query: 114 ERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAA 172
ER Y ++G ++ Y + L + LQ +PH+ +VP + E +Y + ++
Sbjct: 235 ERTVTYSYMAKGAQVFYAKDLDTLSETLQDIRPHFFTTVPRLLEKVYEKMMLKVQAEGGL 294
Query: 173 RRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLA 232
+ + + ++ Y DW A + AI W +A
Sbjct: 295 KEKIFNWALGLTEKYD------------------------FDWQ-AAGLEAIKWK---IA 326
Query: 233 EKLVYKKIQSAIGISKAG-VSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAAR--R 289
+KLV+ K++ +G G V+G + P + + A+GV ++ GYGLTE+SP I+
Sbjct: 327 DKLVFSKVRERLGGRLKGIVTGAAACPPRMTQLFSAVGVPIREGYGLTETSPAISINIFE 386
Query: 290 PTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALD 349
P ++GSVG + ++KI ++ ++G V V+G+ VM GY++ T + +
Sbjct: 387 PYQAMIGSVGPILPSVQVKIDQDDSY----GPNEGEVLVKGNSVMMGYYRKEDKTAEVFN 442
Query: 350 EDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSS 409
++GW TGDIG I +++ L + R K+ + S G+ V P +E
Sbjct: 443 DEGWFLTGDIGKIV------ENKKGIKFLKITDRKKELLKTSGGKYVAPTPIESTLKEDL 496
Query: 410 LIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASE-LSKEKTISLLYGELRKW 468
L+ Q++V+G+ ++ A+I P+ E + + +I + E ++ K ++ + ++
Sbjct: 497 LVEQVMVVGEKRKFVSALIQPNFESLKNWCQDKNIAWSKPEEVITNPKVLAYFQAVINRY 556
Query: 469 TSKCSF--QIGPIHVV 482
+ S QI H+V
Sbjct: 557 NPRFSKVEQIKKFHLV 572
>gi|375129923|ref|YP_004992022.1| long-chain-fatty-acid--CoA ligase-like protein [Vibrio furnissii
NCTC 11218]
gi|315179096|gb|ADT86010.1| hypothetical long-chain-fatty-acid--CoA ligase-like protein [Vibrio
furnissii NCTC 11218]
Length = 604
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 134/437 (30%), Positives = 205/437 (46%), Gaps = 55/437 (12%)
Query: 52 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWH 111
+ E DD+ T +YTSGTTG PKGVML + N+ Q+ + D L LP H
Sbjct: 171 RLEQANDDDLFTLIYTSGTTGKPKGVMLDYCNVGAQLEGHDQRLNLSQDDVSLCFLPLSH 230
Query: 112 VYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSS 170
V+ERA +++ +G Y V ++D L + +P M +VP YE ++S I +++ +
Sbjct: 231 VFERAWSFYVLYKGATNCYLQDVGQVRDALSQVRPTVMCAVPRFYEKIFSAIHEKVARAP 290
Query: 171 AARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHL 230
R+V+ F ++ C + ++ PS WA C H
Sbjct: 291 LHRKVM--------FTWSVNMGAKMARC-HQEKRTPS---------WALKQC------HQ 326
Query: 231 LAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARR 289
LA+KLV K++ +G + GG L I F+ AIG+ V++GYG+TE++ I+
Sbjct: 327 LADKLVLSKLRGLLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTATISCWD 386
Query: 290 PTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALD 349
C S+G + ++KI E NE+L VRG VM+GY+K P T Q D
Sbjct: 387 DQCFDPDSIGMTMPGAQVKI--GENNEIL---------VRGPMVMRGYYKMPEETAQTFD 435
Query: 350 EDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSS 409
E G+L TGD G I G L + R K+ + S G+ + P +E A +
Sbjct: 436 EHGFLKTGDAGHIDEQ----------GNLFITDRIKELMKTSGGKYIAPQVIEGAIGKDH 485
Query: 410 LIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLL 461
+ QI VI ++ A+IVP + + AK L+I + D EL K EK ++ L
Sbjct: 486 FVEQIAVIADTRKFVSALIVPCFDALEEHAKELNIKYHDRLELLKHSQIIEMFEKRVNEL 545
Query: 462 YGELRKWTSKCSFQIGP 478
L K+ F++ P
Sbjct: 546 QHGLAKFEQVKRFKLLP 562
>gi|319774953|ref|YP_004137441.1| long-chain-fatty-acid--CoA ligase [Haemophilus influenzae F3047]
gi|317449544|emb|CBY85748.1| putative long-chain-fatty-acid--CoA ligase [Haemophilus influenzae
F3047]
Length = 599
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 127/407 (31%), Positives = 193/407 (47%), Gaps = 47/407 (11%)
Query: 60 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGY 119
D+ T +YTSGTTG PKGVML + NL HQ+ + + + D LS LP H++ERA
Sbjct: 178 DLFTIIYTSGTTGEPKGVMLDYANLAHQLETHDLSLNVTDQDISLSFLPFSHIFERAWAA 237
Query: 120 FIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 178
+I RG L Y N ++ L +P M +VP YE +Y+ + ++ + R+++
Sbjct: 238 YILHRGAILCYLEDTNQVRSALTEIRPTLMCAVPRFYEKIYAAVLDKVQKAPKLRQIMFH 297
Query: 179 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 238
I + Y F L N K +L L L LA+KLV
Sbjct: 298 WAISVGQKY---------FDLRANNKAIPFL---------------LKKLFALADKLVLS 333
Query: 239 KIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 297
K++ +G K GG L I LF+ AIG+ +++GYG+TE++ ++ S
Sbjct: 334 KLRQLLGGRIKMMPCGGAKLEPAIGLFFHAIGINIKLGYGMTETTATVSCWHDFQFNPNS 393
Query: 298 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 357
+G + ++KI E NE+L VRG VM+GY+K P T QA EDG+L TG
Sbjct: 394 IGTLMPKAKVKI--GENNEIL---------VRGGMVMKGYYKKPEETAQAFTEDGFLKTG 442
Query: 358 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 417
D G G L + R K+ + S G+ + P +E + I QI +I
Sbjct: 443 DAGEFDEQ----------GNLFITDRIKELMKTSNGKYIAPQYIESKIGKDKFIEQIAII 492
Query: 418 GQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGE 464
++ A+IVP + + AK+L+I + D EL K I ++ +
Sbjct: 493 ADAKKYVSALIVPCFDSLEEYAKQLNIKYHDRLELLKNSDILKMFEQ 539
>gi|258622365|ref|ZP_05717390.1| Putative long-chain-fatty-acid--CoA ligase [Vibrio mimicus VM573]
gi|424807687|ref|ZP_18233095.1| long-chain-fatty-acid--CoA ligase, putative [Vibrio mimicus SX-4]
gi|258585381|gb|EEW10105.1| Putative long-chain-fatty-acid--CoA ligase [Vibrio mimicus VM573]
gi|342325629|gb|EGU21409.1| long-chain-fatty-acid--CoA ligase, putative [Vibrio mimicus SX-4]
Length = 601
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 135/435 (31%), Positives = 207/435 (47%), Gaps = 55/435 (12%)
Query: 54 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 113
E DD+ T +YTSGTTG PKGVML ++N+ Q+ + D L LP HV+
Sbjct: 173 EQADFDDLFTLIYTSGTTGTPKGVMLDYRNIGAQLEGHDQRLNLTQDDVSLCFLPLSHVF 232
Query: 114 ERACGYFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAA 172
ERA ++ +G Y V +++D L +P M +VP YE ++S I +++ +
Sbjct: 233 ERAWTAYVLYKGATNCYLHDVSHVRDALGEVRPTVMCAVPRFYEKIFSAIHEKVAKAPFI 292
Query: 173 RRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLA 232
R+V+ F + C + Q+QPS+L L H LA
Sbjct: 293 RKVL--------FTWAVNMGAKMAVC-RQQQRQPSWL---------------LTQSHQLA 328
Query: 233 EKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPT 291
+KLV K+++ +G + GG L I F+ AIG+ V++GYG+TE++ I+
Sbjct: 329 DKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTATISCWDDH 388
Query: 292 CNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDED 351
C S+G + ++KI E NE+L VRG VM+GY+K T ++ DE
Sbjct: 389 CFNPDSIGLSMPGAQVKI--GENNEIL---------VRGPMVMRGYYKLEKETAESFDEH 437
Query: 352 GWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLI 411
G+L TGD G I + G L + R K+ + S G+ + P +E A + I
Sbjct: 438 GFLKTGDAGHIDEN----------GNLFITDRIKELMKTSGGKYIAPQVIEGAIGKDHFI 487
Query: 412 RQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLLYG 463
QI VI ++ A+IVP + + AK L+I + D EL K EK ++ L
Sbjct: 488 EQIAVIADTRKFVSALIVPCFDSLEEYAKELNIKYHDRLELIKHSQVLEMFEKRVNELQK 547
Query: 464 ELRKWTSKCSFQIGP 478
EL K+ F++ P
Sbjct: 548 ELAKFEQVKKFKLLP 562
>gi|153834232|ref|ZP_01986899.1| AMP-binding family protein [Vibrio harveyi HY01]
gi|148869420|gb|EDL68426.1| AMP-binding family protein [Vibrio harveyi HY01]
Length = 602
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 132/447 (29%), Positives = 211/447 (47%), Gaps = 55/447 (12%)
Query: 42 SDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGD 101
+S A + E DD+ T +YTSGTTG PKGVML + N+ Q+ + D
Sbjct: 161 DNSQHAELEVRLEQAQEDDLLTLIYTSGTTGQPKGVMLDYANISAQLEGHDQRLSLTEDD 220
Query: 102 KFLSMLPPWHVYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLYS 160
L LP HV+ERA +++ +G Y ++D L +P M +VP YE ++S
Sbjct: 221 VSLCFLPLSHVFERAWTFYVLYKGGTNCYLQDTMQVRDALSEVRPTVMSAVPRFYEKIFS 280
Query: 161 GIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARI 220
I +++ + R+++ + + A + EG ++PS +
Sbjct: 281 AIHEKVSRAPVHRKIMFTWAVNMGAKMAACHQ--EG-------RKPSLM----------- 320
Query: 221 ICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLT 279
L + LA+KLV K+++ +G + GG L I F+ AIG+ V++GYG+T
Sbjct: 321 ----LRKSYALADKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGMT 376
Query: 280 ESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFK 339
E++ ++ C S+G + ++KI E NE+L VRG VM+GY+K
Sbjct: 377 ETTATVSCWDDQCFDPSSIGMAMPGAQVKI--GENNEIL---------VRGPMVMRGYYK 425
Query: 340 NPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPL 399
P T++ DE G+L TGD G+I + G L + R K+ + S G+ + P
Sbjct: 426 MPEETEKTFDEHGFLKTGDAGYIDEN----------GNLFITDRIKELMKTSNGKYIAPQ 475
Query: 400 ELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK----- 454
+E A + I QI VI ++ A+IVP + + AK L+I + D EL K
Sbjct: 476 VVEGAIGKDHFIEQIAVIADTRKFVSALIVPCYDSLEEYAKELNIKYHDRVELIKHHQIV 535
Query: 455 ---EKTISLLYGELRKWTSKCSFQIGP 478
EK ++ L EL K+ F++ P
Sbjct: 536 EMLEKRVNDLQKELAKFEQVKKFKLLP 562
>gi|149907514|ref|ZP_01896261.1| long-chain acyl-CoA synthetase [Moritella sp. PE36]
gi|149809184|gb|EDM69113.1| long-chain acyl-CoA synthetase [Moritella sp. PE36]
Length = 595
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 123/451 (27%), Positives = 218/451 (48%), Gaps = 60/451 (13%)
Query: 24 VFSYDEIIDLGRESR----KAF----SDSNDARKHYKYETIGSDDIATYVYTSGTTGNPK 75
+ + ++IDL ES AF + ++DA + DD+ T +YTSGTTG PK
Sbjct: 131 IIALTDVIDLKGESNAMHFSAFIQQGNQASDAEFEQRLTDANMDDLVTLIYTSGTTGQPK 190
Query: 76 GVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN 135
GVML + N S ++ D ++ LP HV ER +++ G + ++ + N
Sbjct: 191 GVMLDYTNFAAAFASHDKMIDVSETDTSIAFLPLSHVLERTWSFYLMHSGAKNVH--LEN 248
Query: 136 LK---DDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKR 192
K D + +P +++VP +YE +YS I ++ ++SA ++ + ++ A+
Sbjct: 249 PKLIIDVIAEVKPTLLVAVPRLYEKIYSTIHTRLESASAVKKALFGWATKVGLAH----- 303
Query: 193 IYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV- 251
F L + +QPS+ WL ++ H LA++L++ K++ +G + +
Sbjct: 304 ----FKLVHSNQQPSF------WLASQ---------HKLADRLIFSKLRGILGGNTRFLP 344
Query: 252 SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVD 311
GG + I+ F+++IG+++Q GYG+TE++ + R T GS+G P+ E+KI D
Sbjct: 345 CGGAKVDPDINQFFQSIGIQIQAGYGMTETTATVCCHRGTGYDFGSIGLPLPDMEVKIGD 404
Query: 312 AETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRS 371
NE+L VR VM+GY+K P T++ DGWL TGD G I
Sbjct: 405 --DNEIL---------VRSDTVMKGYYKMPEETEKNF-IDGWLKTGDAGKIL-------- 444
Query: 372 RRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPD 431
G +V+ R K+ + S G+ + P +E + I Q+ + + A+IVP
Sbjct: 445 --ANGEVVMTERIKELMKTSNGKYIAPQLVEGTLNKDHFIDQVAIFADSRHFVSALIVPS 502
Query: 432 KEEVLMAAKRLSIVHADASELSKEKTISLLY 462
+ + A +++ + +EL + I ++
Sbjct: 503 FDALEEYANSINLQFSSKAELLRHSHIVTMF 533
>gi|449145821|ref|ZP_21776618.1| long-chain-fatty-acid--CoA ligase [Vibrio mimicus CAIM 602]
gi|449078529|gb|EMB49466.1| long-chain-fatty-acid--CoA ligase [Vibrio mimicus CAIM 602]
Length = 601
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 135/435 (31%), Positives = 207/435 (47%), Gaps = 55/435 (12%)
Query: 54 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 113
E DD+ T +YTSGTTG PKGVML ++N+ Q+ + D L LP HV+
Sbjct: 173 EQADFDDLFTLIYTSGTTGTPKGVMLDYRNIGAQLEGHDQRLNLTQDDVSLCFLPLSHVF 232
Query: 114 ERACGYFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAA 172
ERA ++ +G Y V +++D L +P M +VP YE ++S I +++ +
Sbjct: 233 ERAWTAYVLYKGATNCYLHDVSHVRDALGEVRPTVMCAVPRFYEKIFSAIHEKVAKAPFI 292
Query: 173 RRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLA 232
R+V+ F + C + Q+QPS+L L H LA
Sbjct: 293 RKVL--------FTWAVNMGAKMAVC-RQQQRQPSWL---------------LTQSHQLA 328
Query: 233 EKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPT 291
+KLV K+++ +G + GG L I F+ AIG+ V++GYG+TE++ I+
Sbjct: 329 DKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTATISCWDDH 388
Query: 292 CNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDED 351
C S+G + ++KI E NE+L VRG VM+GY+K T ++ DE
Sbjct: 389 CFNPDSIGLSMPGAQVKI--GENNEIL---------VRGPMVMRGYYKLEKETAESFDEH 437
Query: 352 GWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLI 411
G+L TGD G I + G L + R K+ + S G+ + P +E A + I
Sbjct: 438 GFLKTGDAGHIDEN----------GNLFITDRIKELMKTSGGKYIAPQVIEGAIGKDHFI 487
Query: 412 RQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLLYG 463
QI VI ++ A+IVP + + AK L+I + D EL K EK ++ L
Sbjct: 488 EQIAVIADTRKFVSALIVPCFDSLEEYAKELNIKYHDRLELIKHSQVLEMFEKRVNELQK 547
Query: 464 ELRKWTSKCSFQIGP 478
EL K+ F++ P
Sbjct: 548 ELAKFEQVKKFKLLP 562
>gi|329123150|ref|ZP_08251720.1| long-chain-fatty-acid--CoA ligase [Haemophilus aegyptius ATCC
11116]
gi|327471705|gb|EGF17147.1| long-chain-fatty-acid--CoA ligase [Haemophilus aegyptius ATCC
11116]
Length = 607
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 127/407 (31%), Positives = 193/407 (47%), Gaps = 47/407 (11%)
Query: 60 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGY 119
D+ T +YTSGTTG PKGVML + NL HQ+ + + + D LS LP H++ERA
Sbjct: 186 DLFTIIYTSGTTGEPKGVMLDYANLAHQLETHDLSLNVTDQDISLSFLPFSHIFERAWAA 245
Query: 120 FIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 178
+I RG L Y N ++ L +P M +VP YE +Y+ + ++ + R+++
Sbjct: 246 YILHRGAILCYLEDTNQVRSALTEIRPTLMCAVPRFYEKIYAAVLDKVQKAPKLRQIMFH 305
Query: 179 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 238
I + Y F L N K +L L L LA+KLV
Sbjct: 306 WAISVGQKY---------FDLRANNKAIPFL---------------LKKLFALADKLVLS 341
Query: 239 KIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 297
K++ +G K GG L I LF+ AIG+ +++GYG+TE++ ++ S
Sbjct: 342 KLRQLLGGRIKMMPCGGAKLEPAIGLFFHAIGINIKLGYGMTETTATVSCWHDFQFNPNS 401
Query: 298 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 357
+G + ++KI E NE+L VRG VM+GY+K P T QA EDG+L TG
Sbjct: 402 IGTLMPKAKVKI--GENNEIL---------VRGGMVMKGYYKKPEETAQAFTEDGFLKTG 450
Query: 358 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 417
D G G L + R K+ + S G+ + P +E + I QI +I
Sbjct: 451 DAGEFDEQ----------GNLFITDRIKELMKTSNGKYIAPQYIESKIGKDKFIEQIAII 500
Query: 418 GQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGE 464
++ A+IVP + + AK+L+I + D EL K I ++ +
Sbjct: 501 ADAKKYVSALIVPCFDSLEEYAKQLNIKYHDRLELLKNSDILKMFEQ 547
>gi|384102846|ref|ZP_10003829.1| long-chain-fatty-acid--CoA ligase [Rhodococcus imtechensis RKJ300]
gi|383839515|gb|EID78866.1| long-chain-fatty-acid--CoA ligase [Rhodococcus imtechensis RKJ300]
Length = 599
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 116/397 (29%), Positives = 199/397 (50%), Gaps = 56/397 (14%)
Query: 45 NDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLY-----DIVPAEN 99
+D+ + + ++D+A+ VYTSGTTG PKG +LTH+N L ++R+L D+ A
Sbjct: 163 DDSEVFKRVVALTANDLASLVYTSGTTGRPKGCILTHRNFLSEVRALLAAPIGDV--ARP 220
Query: 100 GDKFLSMLPPWHVYERACGYFIFSRG-IELMYTAVRNLKDDLQRYQPHYMISVPLVYETL 158
G++ L+ LP HV RA +F G I+ ++ + + +R++P+ ++ VP V+E +
Sbjct: 221 GNRVLTFLPLAHVLARAVSLAMFEAGAIQAHWSDFGTVTGEFERFRPNTILGVPRVFEKV 280
Query: 159 YSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWA 218
G ++ ++ ++ + + AY+ ++ PS + L
Sbjct: 281 RDGAARKASSAGGLQKRIFDFAEATAVAYSE----------AQDAGGPSLRLRL------ 324
Query: 219 RIICAILWPLHLLAEKLVYKKIQSAIGISKA-GVSGGGSLPMHIDLFYEAIGVKVQVGYG 277
LA+KLVY K+++A+G +SGGG+L + F+ +GV V GYG
Sbjct: 325 ---------ERALADKLVYAKLRAALGGDCWWAISGGGALMPRLGHFFRGMGVPVYEGYG 375
Query: 278 LTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGY 337
LTES+ P +G+VG P++ ++I + G +++RG V GY
Sbjct: 376 LTESTAAHCVNVPGVQKIGTVGQPLSGNSVRIAE-----------DGEIELRGGVVFGGY 424
Query: 338 FKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVE 397
++N AT++ LD DGW TGD+G + G L + GR KD ++ + G+NV
Sbjct: 425 WRNEHATREVLD-DGWFRTGDLGDLDDE----------GYLTITGRKKDLLITAGGKNVS 473
Query: 398 PLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEE 434
P LE+ +L+ Q VV+G + GA++ D +E
Sbjct: 474 PGPLEDRLRSHTLVSQAVVVGDGRPFVGALLTVDPQE 510
>gi|344343202|ref|ZP_08774071.1| Long-chain-fatty-acid--CoA ligase [Marichromatium purpuratum 984]
gi|343805133|gb|EGV23030.1| Long-chain-fatty-acid--CoA ligase [Marichromatium purpuratum 984]
Length = 649
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 134/400 (33%), Positives = 194/400 (48%), Gaps = 48/400 (12%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 118
D +AT VYTSGTTG PKGVML+H+N+L + D FLS LP H+ ER
Sbjct: 228 DALATIVYTSGTTGRPKGVMLSHRNILSNAHGALTQIDVYGEDVFLSFLPLSHMLERTGS 287
Query: 119 YFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 176
Y++ G + Y ++ L +DLQ +P MI+VP V+E +Y I Q+ R
Sbjct: 288 YYLPMMAGSRVAYARSIGQLAEDLQTIRPTAMIAVPRVFERVYQRILDQL----DKRPKP 343
Query: 177 ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLV 236
AR L + A A R +E R Q + + WL ++WP LL K+
Sbjct: 344 ARWLFNAAVA--AGWRTFE-----REQGRAGWH----PWL-------LVWP--LLRRKVA 383
Query: 237 YKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLG 296
Q G +A VSGG L + + +GV + GYGLTE+SPVI+ N+
Sbjct: 384 LPVQQRLGGRLRATVSGGAPLSTEVARTFIGLGVPLLQGYGLTETSPVISFNTLQSNIPA 443
Query: 297 SVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNT 356
SVG P+ +++I G + + VRG M GY+ N +AT + L +DGWL+T
Sbjct: 444 SVGVPLRGLQVRI-----------GPESELLVRGDNTMLGYWNNHAATAKMLAQDGWLHT 492
Query: 357 GDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVV 416
GD I +H + + GR KD +VLS GE V P ++E A L Q+VV
Sbjct: 493 GDQARIEDNH-----------IYITGRIKDILVLSNGEKVPPGDMELAIALDPLFDQVVV 541
Query: 417 IGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEK 456
+G+ Q A++V + + A L + D + L+ +
Sbjct: 542 LGEGQSYLSALLVLNPDLWPGLALELGLEPEDPTSLANAR 581
>gi|419963959|ref|ZP_14479919.1| long-chain-fatty-acid--CoA ligase [Rhodococcus opacus M213]
gi|414570495|gb|EKT81228.1| long-chain-fatty-acid--CoA ligase [Rhodococcus opacus M213]
Length = 599
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 116/397 (29%), Positives = 199/397 (50%), Gaps = 56/397 (14%)
Query: 45 NDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLY-----DIVPAEN 99
+D+ + + ++D+A+ VYTSGTTG PKG +LTH+N L ++R+L D+ A
Sbjct: 163 DDSEVFKRVVALTANDLASLVYTSGTTGRPKGCILTHRNFLSEVRALLAAPIGDV--ARP 220
Query: 100 GDKFLSMLPPWHVYERACGYFIFSRG-IELMYTAVRNLKDDLQRYQPHYMISVPLVYETL 158
G++ L+ LP HV RA +F G I+ ++ + + +R++P+ ++ VP V+E +
Sbjct: 221 GNRVLTFLPLAHVLARAVSLAMFEAGAIQAHWSDFGTVTGEFERFRPNTILGVPRVFEKV 280
Query: 159 YSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWA 218
G ++ ++ ++ + + AY+ ++ PS + L
Sbjct: 281 RDGAARKASSAGGLQKRIFDFAEATAVAYSE----------AQDAGGPSLRLRL------ 324
Query: 219 RIICAILWPLHLLAEKLVYKKIQSAIGISKA-GVSGGGSLPMHIDLFYEAIGVKVQVGYG 277
LA+KLVY K+++A+G +SGGG+L + F+ +GV V GYG
Sbjct: 325 ---------ERALADKLVYAKLRAALGGDCWWAISGGGALMPRLGHFFRGMGVPVYEGYG 375
Query: 278 LTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGY 337
LTES+ P +G+VG P++ ++I + G +++RG V GY
Sbjct: 376 LTESTAAHCVNVPGVQKIGTVGQPLSGNSVRIAE-----------DGEIELRGGVVFGGY 424
Query: 338 FKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVE 397
++N AT++ LD DGW TGD+G + G L + GR KD ++ + G+NV
Sbjct: 425 WRNEHATREVLD-DGWFRTGDLGDLDDE----------GYLTITGRKKDLLITAGGKNVS 473
Query: 398 PLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEE 434
P LE+ +L+ Q VV+G + GA++ D +E
Sbjct: 474 PGPLEDRLRSHTLVSQAVVVGDGRPFVGALLTVDPQE 510
>gi|432336080|ref|ZP_19587613.1| long-chain-fatty-acid--CoA ligase [Rhodococcus wratislaviensis IFP
2016]
gi|430776994|gb|ELB92384.1| long-chain-fatty-acid--CoA ligase [Rhodococcus wratislaviensis IFP
2016]
Length = 599
Score = 174 bits (442), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 116/397 (29%), Positives = 199/397 (50%), Gaps = 56/397 (14%)
Query: 45 NDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLY-----DIVPAEN 99
+D+ + + ++D+A+ VYTSGTTG PKG +LTH+N L ++R+L D+ A
Sbjct: 163 DDSEVFKRVVALTANDLASLVYTSGTTGRPKGCILTHRNFLSEVRALLAAPIGDV--ARP 220
Query: 100 GDKFLSMLPPWHVYERACGYFIFSRG-IELMYTAVRNLKDDLQRYQPHYMISVPLVYETL 158
G++ L+ LP HV RA +F G I+ ++ + + +R++P+ ++ VP V+E +
Sbjct: 221 GNRVLTFLPLAHVLARAVSLAMFEAGAIQAHWSDFGTVTGEFERFRPNAILGVPRVFEKV 280
Query: 159 YSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWA 218
G ++ ++ ++ + + AY+ ++ PS + L
Sbjct: 281 RDGAARKASSAGGLQKRIFDFAEATAVAYSE----------AQDAGGPSLRLRL------ 324
Query: 219 RIICAILWPLHLLAEKLVYKKIQSAIGISKA-GVSGGGSLPMHIDLFYEAIGVKVQVGYG 277
LA+KLVY K+++A+G +SGGG+L + F+ +GV V GYG
Sbjct: 325 ---------ERALADKLVYAKLRAALGGDCWWAISGGGALMPRLGHFFRGMGVPVYEGYG 375
Query: 278 LTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGY 337
LTES+ P +G+VG P++ ++I + G +++RG V GY
Sbjct: 376 LTESTAAHCVNVPGVQKIGTVGQPLSGNSVRIAE-----------DGEIELRGGVVFGGY 424
Query: 338 FKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVE 397
++N AT++ LD DGW TGD+G + G L + GR KD ++ + G+NV
Sbjct: 425 WRNEHATREVLD-DGWFRTGDLGDLDDE----------GYLTITGRKKDLLITAGGKNVS 473
Query: 398 PLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEE 434
P LE+ +L+ Q VV+G + GA++ D +E
Sbjct: 474 PGPLEDRLRSHTLVSQAVVVGDGRPFVGALLTVDPQE 510
>gi|86148106|ref|ZP_01066406.1| putative long-chain-fatty-acid-CoA ligase [Vibrio sp. MED222]
gi|85834093|gb|EAQ52251.1| putative long-chain-fatty-acid-CoA ligase [Vibrio sp. MED222]
Length = 602
Score = 174 bits (442), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 128/430 (29%), Positives = 207/430 (48%), Gaps = 55/430 (12%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 118
DD+ T +YTSGTTG PKGVML + N+ +Q++ + + D L LP HV+ERA
Sbjct: 178 DDLLTLIYTSGTTGQPKGVMLDYTNVGYQLKGHDERLSLSKDDVSLCFLPLSHVFERAWT 237
Query: 119 YFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 177
+++ +G Y ++D L +P M +VP YE ++S I +++ + R+V+
Sbjct: 238 FYVLYKGATNCYLQDTMQVRDALSDVKPTVMSAVPRFYEKIFSAIHEKVSKAPFIRKVLF 297
Query: 178 RALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVY 237
+ + + + EG + PS++ L H LA+KLV
Sbjct: 298 TWAVNMGAKLSVCHQ--EG-------RTPSFM---------------LKKSHALADKLVL 333
Query: 238 KKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLG 296
K+++ +G + + GG L I F+ AIG+ V++GYG+TE++ ++ C
Sbjct: 334 SKLRALLGGNINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTATVSCWDDRCFNPD 393
Query: 297 SVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNT 356
S+G + E+KI G+K + VRG VM+GY+K P T + DE G+L T
Sbjct: 394 SIGMSMPGAEVKI-----------GAKDEILVRGPMVMRGYYKMPEETAKTFDEHGFLKT 442
Query: 357 GDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVV 416
GD G + G L + R K+ + S G+ + P +E A + I QI V
Sbjct: 443 GDAGHFDEN----------GNLFITDRIKELMKTSGGKYIAPQVVEGAIGKDHFIEQIAV 492
Query: 417 IGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLLYGELRKW 468
I ++ A+IVP + + + AK L+I + D EL K EK ++ L EL K+
Sbjct: 493 IADTRKFVSALIVPCYDSLEVYAKELNIKYHDRVELVKNHQIVEMLEKRVNDLQQELAKF 552
Query: 469 TSKCSFQIGP 478
F++ P
Sbjct: 553 EQVKKFKLLP 562
>gi|354596150|ref|ZP_09014167.1| Long-chain-fatty-acid--CoA ligase [Brenneria sp. EniD312]
gi|353674085|gb|EHD20118.1| Long-chain-fatty-acid--CoA ligase [Brenneria sp. EniD312]
Length = 607
Score = 174 bits (442), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 129/438 (29%), Positives = 213/438 (48%), Gaps = 54/438 (12%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDI-VPAENGDKFLSMLPPWHVYERAC 117
+D+ T +YTSGTTG PKGVML + N+ Q++ L+D+ + D L LP HV+ERA
Sbjct: 187 NDLFTLIYTSGTTGEPKGVMLDYANMAMQLK-LHDLRLRVTETDISLCFLPLSHVFERAW 245
Query: 118 GYFIFSRGIELMYTAVRNL-KDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 176
+FI G + +Y NL + +Q +P M +VP YE +YS I ++ + R+ +
Sbjct: 246 SFFIMHSGAQNVYLNDTNLVRAAMQAVKPTMMCAVPRFYEKVYSAIYEKAAQAPWYRQRL 305
Query: 177 ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLV 236
+A +R+ F L R K P W R+ +H A++LV
Sbjct: 306 ------FHWAVAQGRRV---FLLRRAGKHPG--------AWRRL-------MHRYADRLV 341
Query: 237 YKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVL 295
K++ +G + + G L +I LF++++G+++ GYG+TE+ ++ L
Sbjct: 342 LGKLRQLLGGQIRFLPAAGARLDDNIILFFQSMGIRIVYGYGMTETCATVSCWEEENFRL 401
Query: 296 GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLN 355
GS+G P+ E++I G+ ++VRG+ VM+GYF P T A DGWL
Sbjct: 402 GSIGTPLPEIEVRI-----------GADNEIQVRGATVMRGYFHRPQETADAFTADGWLK 450
Query: 356 TGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIV 415
TGD G + G L + R KD + S G+ + P LE + I Q+
Sbjct: 451 TGDAGELDAQ----------GNLFITERLKDLMKTSGGKYIAPQHLEGTLGQDRFIEQVA 500
Query: 416 VIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYG----ELRKWTSK 471
VI ++ A+IVP E + A+ +++ + D EL + I L+ E++K S+
Sbjct: 501 VIADARKYVSALIVPCFEALEEHARSINLKYHDRLELLRHSHIIELFEQRLREIQKELSR 560
Query: 472 CSFQIGPIHVVDEPFTVN 489
Q+ ++ PF+++
Sbjct: 561 VE-QVKKFTLLPAPFSMD 577
>gi|156973145|ref|YP_001444052.1| hypothetical protein VIBHAR_00824 [Vibrio harveyi ATCC BAA-1116]
gi|156524739|gb|ABU69825.1| hypothetical protein VIBHAR_00824 [Vibrio harveyi ATCC BAA-1116]
Length = 602
Score = 174 bits (442), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 132/447 (29%), Positives = 211/447 (47%), Gaps = 55/447 (12%)
Query: 42 SDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGD 101
+S A + E DD+ T +YTSGTTG PKGVML + N+ Q+ + D
Sbjct: 161 DNSQRAELEVRLEQAQEDDLLTLIYTSGTTGQPKGVMLDYANISAQLEGHDQCLSLTEDD 220
Query: 102 KFLSMLPPWHVYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLYS 160
L LP HV+ERA +++ +G Y ++D L +P M +VP YE ++S
Sbjct: 221 VSLCFLPLSHVFERAWTFYVLYKGGTNCYLQDTMQVRDALSEVRPTVMSAVPRFYEKIFS 280
Query: 161 GIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARI 220
I +++ + R+++ + + A + EG ++PS +
Sbjct: 281 AIHEKVSRAPVHRKIMFTWAVNMGAKMAACHQ--EG-------RKPSLM----------- 320
Query: 221 ICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLT 279
L + LA+KLV K+++ +G + GG L I F+ AIG+ V++GYG+T
Sbjct: 321 ----LRKSYALADKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGMT 376
Query: 280 ESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFK 339
E++ ++ C S+G + ++KI E NE+L VRG VM+GY+K
Sbjct: 377 ETTATVSCWDDQCFDPSSIGMAMPGAQVKI--GENNEIL---------VRGPMVMRGYYK 425
Query: 340 NPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPL 399
P T++ DE G+L TGD G+I + G L + R K+ + S G+ + P
Sbjct: 426 MPEETEKTFDEHGFLKTGDGGYIDEN----------GNLFITDRIKELMKTSNGKYIAPQ 475
Query: 400 ELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK----- 454
+E A + I QI VI ++ A+IVP + + AK L+I + D EL K
Sbjct: 476 VVEGAIGKDHFIEQIAVIADTRKFVSALIVPCYDSLEEYAKELNIKYHDRVELIKHHQIV 535
Query: 455 ---EKTISLLYGELRKWTSKCSFQIGP 478
EK ++ L EL K+ F++ P
Sbjct: 536 EMLEKRVNDLQKELAKFEQVKKFKLLP 562
>gi|262170570|ref|ZP_06038248.1| long-chain-fatty-acid--CoA ligase [Vibrio mimicus MB-451]
gi|261891646|gb|EEY37632.1| long-chain-fatty-acid--CoA ligase [Vibrio mimicus MB-451]
Length = 601
Score = 174 bits (442), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 135/435 (31%), Positives = 207/435 (47%), Gaps = 55/435 (12%)
Query: 54 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 113
E DD+ T +YTSGTTG PKGVML ++N+ Q+ + D L LP HV+
Sbjct: 173 EQADFDDLFTLIYTSGTTGTPKGVMLDYRNIGAQLEGHDQRLNLTQDDVSLCFLPLSHVF 232
Query: 114 ERACGYFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAA 172
ERA ++ +G Y V +++D L +P M +VP YE ++S I +++ +
Sbjct: 233 ERAWTAYVLYKGATNCYLHDVSHVRDALGEVRPTVMCAVPRFYEKIFSAIHEKVAKAPFI 292
Query: 173 RRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLA 232
R+V+ F + C + Q+QPS+L L H LA
Sbjct: 293 RKVL--------FTWAVNMGAKMAVC-RQQQRQPSWL---------------LKQNHQLA 328
Query: 233 EKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPT 291
+KLV K+++ +G + GG L I F+ AIG+ V++GYG+TE++ I+
Sbjct: 329 DKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTATISCWDDH 388
Query: 292 CNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDED 351
C S+G + ++KI E NE+L VRG VM+GY+K T ++ DE
Sbjct: 389 CFNPDSIGLSMPGAQVKI--GENNEIL---------VRGPMVMRGYYKLEKETAESFDEH 437
Query: 352 GWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLI 411
G+L TGD G I + G L + R K+ + S G+ + P +E A + I
Sbjct: 438 GFLKTGDAGHIDEN----------GNLFITDRIKELMKTSGGKYIAPQVIEGAIGKDHFI 487
Query: 412 RQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLLYG 463
QI VI ++ A+IVP + + AK L+I + D EL K EK ++ L
Sbjct: 488 EQIAVIADTRKFVSALIVPCFDSLEEYAKELNIKYHDRLELIKHSQVLEMFEKRVNELQK 547
Query: 464 ELRKWTSKCSFQIGP 478
EL K+ F++ P
Sbjct: 548 ELAKFEQVKKFKLLP 562
>gi|229524469|ref|ZP_04413874.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae bv. albensis
VL426]
gi|229338050|gb|EEO03067.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae bv. albensis
VL426]
Length = 601
Score = 174 bits (442), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 138/466 (29%), Positives = 219/466 (46%), Gaps = 63/466 (13%)
Query: 31 IDLGRESRKAFSDSNDARKHYK--------YETIGSDDIATYVYTSGTTGNPKGVMLTHK 82
IDL + S D A+ H++ E DD+ T++YTSGTTG PKGVML ++
Sbjct: 142 IDLKQASCAMHWDEFVAQSHHQDRAPLNALIEQANYDDLFTFIYTSGTTGTPKGVMLDYR 201
Query: 83 NLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQ 141
N+ Q+ + D L LP HV+ERA ++ +G Y V ++++ L
Sbjct: 202 NIGAQLEGHDQRLNLTQEDVSLCFLPLSHVFERAWTAYVLYKGATNCYLQDVAHVREALA 261
Query: 142 RYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTR 201
+P M +VP YE ++S I +++ + R+V+ F + C +
Sbjct: 262 EVRPTVMCAVPRFYEKIFSAIHEKVAKAPLVRKVL--------FTWAVNMGAKMAVC-RQ 312
Query: 202 NQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMH 260
Q+QPS++ L H A+KLV K+++ +G + GG L
Sbjct: 313 QQRQPSWM---------------LKQSHQFADKLVLSKLRALLGGRINFMPCGGAKLDET 357
Query: 261 IDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA 320
I F+ AIG+ V++GYG+TE++ ++ C S+G + ++KI E NE+L
Sbjct: 358 IGRFFHAIGINVKLGYGMTETTATVSCWDDHCFNPDSIGLSMPGAQVKI--GENNEIL-- 413
Query: 321 GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVL 380
VRG VM+GY+K T ++ DE G+L TGD G I + G L +
Sbjct: 414 -------VRGPMVMRGYYKLDKETAESFDEHGFLKTGDAGHIDEN----------GNLFI 456
Query: 381 EGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAK 440
R K+ + S G+ + P +E A + I QI VI ++ A+IVP + + + AK
Sbjct: 457 TDRIKELMKTSGGKYIAPQVIEGAIGKDHFIEQIAVIADTRKFVSALIVPCFDSLEVYAK 516
Query: 441 RLSIVHADASELSK--------EKTISLLYGELRKWTSKCSFQIGP 478
L+I + D EL K EK ++ L EL K+ F++ P
Sbjct: 517 ELNIKYQDRLELLKHSQVLEMFEKRVNDLQKELAKFEQVKKFRLLP 562
>gi|162456295|ref|YP_001618662.1| AMP-binding protein [Sorangium cellulosum So ce56]
gi|161166877|emb|CAN98182.1| AMP-binding enzyme family protein [Sorangium cellulosum So ce56]
Length = 1530
Score = 174 bits (442), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 127/407 (31%), Positives = 201/407 (49%), Gaps = 67/407 (16%)
Query: 25 FSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNL 84
F+ ++ DLG S + D R +GS D+A+ VYTSGTTG PKGV+LTH N
Sbjct: 726 FAEGQVPDLGPASGDGLAPP-DVR-------VGSQDVASVVYTSGTTGEPKGVLLTHGNF 777
Query: 85 LHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFI-FSRGIELMY---TAVRNLKDDL 140
+ SL + P + D+ LS+LP +E CG + S+G ++Y + + D L
Sbjct: 778 TALLASLAPLFPLKASDRVLSVLPLHQTFEVTCGLLLPLSQGARIIYLDEVSADRVSDGL 837
Query: 141 QRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLT 200
++ + M+ VP +++ L R++VAR + A TAF
Sbjct: 838 KKARVTAMVGVPALWQML-------------ERQIVARVKEQGPAAATAF---------- 874
Query: 201 RNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPM 259
S+ + L L R L L A +L + + A+G + + +SGG +LP
Sbjct: 875 ------SWAMELNRMLGKR--------LGLNAGRLFFGSVHDALGGNVRFLISGGAALPR 920
Query: 260 HIDLFYEAIGVKVQVGYGLTESSPVIAARRPT-CNVLGSVGHPINHTEIKIVDAETNEVL 318
++ +G+ + GYGLTE++P++ +P+ G+VG PI +IKI + + N V
Sbjct: 921 DTAAVFKGLGLPLAEGYGLTEAAPLLTVTKPSPAASPGNVGKPIPGVKIKIANPDANGV- 979
Query: 319 PAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVL 378
G V RG VM+GY +P AT+ ALD DGWL TGD+G + +GR L
Sbjct: 980 -----GEVLARGPNVMKGYADDPDATQAALDADGWLRTGDLGKL---DKQGR-------L 1024
Query: 379 VLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPG 425
VL GR + I + GE++ P ++E + ++++ ++G D R G
Sbjct: 1025 VLVGRQSEVISAAKGESLYPADIERMLGKIEHVKELAIVGIDNGRGG 1071
>gi|261211577|ref|ZP_05925865.1| long-chain-fatty-acid--CoA ligase [Vibrio sp. RC341]
gi|260839532|gb|EEX66158.1| long-chain-fatty-acid--CoA ligase [Vibrio sp. RC341]
Length = 601
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 134/435 (30%), Positives = 208/435 (47%), Gaps = 55/435 (12%)
Query: 54 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 113
E DD+ T +YTSGTTG PKGVML ++N+ Q+ + D L LP HV+
Sbjct: 173 EQADFDDLFTLIYTSGTTGTPKGVMLDYRNIGAQLEGHDQRLNLTEEDVSLCFLPLSHVF 232
Query: 114 ERACGYFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAA 172
ERA ++ +G Y V +++D L +P M +VP YE ++S I +++ +
Sbjct: 233 ERAWTAYVLYKGATNCYLHDVSHVRDALGEVRPTVMCAVPRFYEKIFSAIHEKVAKAPLI 292
Query: 173 RRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLA 232
R+V+ F + C + Q+QPS+L L H LA
Sbjct: 293 RKVL--------FTWAVNMGAKMAVC-RQQQRQPSWL---------------LKQSHQLA 328
Query: 233 EKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPT 291
+KLV K+++ +G + GG L I F+ AIG+ V++GYG+TE++ ++
Sbjct: 329 DKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTATVSCWDDH 388
Query: 292 CNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDED 351
C S+G + ++KI E NE+L VRG VM+GY+K T ++ DE+
Sbjct: 389 CFNPDSIGLSMPGAQVKI--GENNEIL---------VRGPMVMRGYYKLEKETAESFDEN 437
Query: 352 GWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLI 411
G+L TGD G I + G L + R K+ + S G+ + P +E A + I
Sbjct: 438 GFLKTGDAGHIDEN----------GNLFITDRIKELMKTSGGKYIAPQVIEGAIGKDHFI 487
Query: 412 RQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLLYG 463
QI VI ++ A+IVP + + AK L+I + D EL K EK ++ L
Sbjct: 488 EQIAVIADTRKFVSALIVPCFDSLEEYAKELNIKYHDRLELIKHSQVLEMFEKRVNELQK 547
Query: 464 ELRKWTSKCSFQIGP 478
EL K+ F++ P
Sbjct: 548 ELAKFEQVKKFKLLP 562
>gi|148827162|ref|YP_001291915.1| long chain fatty acid CoA ligase [Haemophilus influenzae PittGG]
gi|148718404|gb|ABQ99531.1| long chain fatty acid CoA ligase [Haemophilus influenzae PittGG]
Length = 599
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 126/407 (30%), Positives = 193/407 (47%), Gaps = 47/407 (11%)
Query: 60 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGY 119
D+ T +YTSGTTG PKGVML + NL HQ+ + + + D LS LP H++ERA
Sbjct: 178 DLFTIIYTSGTTGEPKGVMLDYANLAHQLETHDLSLNVTDQDISLSFLPFSHIFERAWAA 237
Query: 120 FIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 178
+I RG L Y N ++ L +P M +VP YE +Y+ + ++ + R+++
Sbjct: 238 YILHRGAILCYLEDTNQVRSALTEIRPTLMCAVPRFYEKIYAAVLDKVQKAPKLRQIMFH 297
Query: 179 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 238
I + + F L N K +L L LA+KLV
Sbjct: 298 WAISVGQKH---------FDLRANNKAIPFL---------------LKKQFALADKLVLS 333
Query: 239 KIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 297
K++ +G K GG L + I LF+ AIG+ +++GYG+TE++ ++ S
Sbjct: 334 KLRQLLGGRIKMMPCGGAKLELAIGLFFHAIGINIKLGYGMTETTATVSCWHDFQFNPNS 393
Query: 298 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 357
+G + E+KI E NE+L VRG VM+GY+K P T QA EDG+L TG
Sbjct: 394 IGTLMPKAEVKI--GENNEIL---------VRGGMVMKGYYKKPEETAQAFTEDGFLKTG 442
Query: 358 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 417
D G G L + R K+ + S G+ + P +E + I QI +I
Sbjct: 443 DAGEFDEQ----------GNLFITDRIKELMKTSNGKYIAPQYIESKIGKDKFIEQIAII 492
Query: 418 GQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGE 464
++ A+IVP + + AK+L+I + D EL K I ++ +
Sbjct: 493 ADAKKYVSALIVPCFDSLEEYAKQLNIKYHDRLELLKNSDILKMFEQ 539
>gi|422348277|ref|ZP_16429170.1| hypothetical protein HMPREF9465_00060 [Sutterella wadsworthensis
2_1_59BFAA]
gi|404659530|gb|EKB32377.1| hypothetical protein HMPREF9465_00060 [Sutterella wadsworthensis
2_1_59BFAA]
Length = 621
Score = 174 bits (441), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 128/424 (30%), Positives = 200/424 (47%), Gaps = 62/424 (14%)
Query: 17 DIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKG 76
D+ IPV + + + LG S+ E + D+A VYTSGTTGNPKG
Sbjct: 164 DLEAPIPVMTKETFLKLGETSQ------------LPKEAPKATDLAALVYTSGTTGNPKG 211
Query: 77 VMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYT----- 131
VMLTH+N++ I+ + + + FLS LP H +ER Y++ + L YT
Sbjct: 212 VMLTHRNVISNIQGVLKNLQPSGHETFLSFLPLSHTFERTTSYYL---ALGLGYTTAFNR 268
Query: 132 AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFK 191
++ NL+ D + +P ++SVP VYE +Y+ +Q + S +R F + A +
Sbjct: 269 SIANLQADFREIRPTVLMSVPRVYEMIYAKLQDGLAKKS--------KFVRYLFDW-AVE 319
Query: 192 RIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAG 250
+ FC S A +D A + +K V ++++ G
Sbjct: 320 VGWRRFCRENGLPVESSSRAWLDPFVAGFL-----------DKKVGSQLRAVFGDRIHLY 368
Query: 251 VSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIV 310
+SGG +L + + A+GV + GYG+TE+SP+I+ + N +VG + + E+++
Sbjct: 369 ISGGAALSPAVARTFFALGVPIYQGYGMTETSPIISVNKVGHNHPNTVGPALPNIEVRL- 427
Query: 311 DAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGR 370
G ++VRG VM+GY+ ATK EDGWL TGD+ I P
Sbjct: 428 ----------GEGDELQVRGPTVMKGYWNREEATKAIFTEDGWLRTGDVCTIYPD----- 472
Query: 371 SRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVP 430
G + + GR K+ IV ST E V P +LE A L Q +V+G D+ A+ V
Sbjct: 473 -----GNIRITGRIKEIIVTSTSEKVPPADLESAITSDRLFSQCMVVGDDRPFIAAVAVV 527
Query: 431 DKEE 434
+ +E
Sbjct: 528 NPDE 531
>gi|424048004|ref|ZP_17785560.1| AMP-binding enzyme family protein [Vibrio cholerae HENC-03]
gi|408883314|gb|EKM22101.1| AMP-binding enzyme family protein [Vibrio cholerae HENC-03]
Length = 602
Score = 174 bits (441), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 131/447 (29%), Positives = 211/447 (47%), Gaps = 55/447 (12%)
Query: 42 SDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGD 101
DS + E +D+ T +YTSGTTG PKGVML + N+ Q+ + + D
Sbjct: 161 DDSQQPELTSRLEQAQEEDLLTLIYTSGTTGQPKGVMLDYANISAQLEGHDERLSLTEDD 220
Query: 102 KFLSMLPPWHVYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLYS 160
L LP HV+ERA +++ +G Y ++D L +P M +VP YE ++S
Sbjct: 221 VSLCFLPLSHVFERAWTFYVLYKGATNCYLQDTMQVRDALSEVRPTVMSAVPRFYEKIFS 280
Query: 161 GIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARI 220
I +++ + R+++ + + A + EG ++PS +
Sbjct: 281 AIHEKVSRAPVHRKIMFTWAVNMGAKMAACHQ--EG-------RKPSLM----------- 320
Query: 221 ICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLT 279
L + LA+KLV K+++ +G + GG L I F+ AIG+ V++GYG+T
Sbjct: 321 ----LRKSYALADKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGMT 376
Query: 280 ESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFK 339
E++ ++ C S+G + ++KI E NE+L VRG VM+GY+K
Sbjct: 377 ETTATVSCWDDQCFDPSSIGMAMPGAQVKI--GENNEIL---------VRGPMVMRGYYK 425
Query: 340 NPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPL 399
P T++ DE G+L TGD G+I + G L + R K+ + S G+ + P
Sbjct: 426 MPEETEKTFDEHGFLKTGDAGYIDEN----------GNLFITDRIKELMKTSNGKYIAPQ 475
Query: 400 ELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK----- 454
+E A + I QI VI ++ A+IVP + + AK L+I + D EL K
Sbjct: 476 VVEGAIGKDHFIEQIAVIADTRKFVSALIVPCYDSLEEYAKELNIKYHDRVELIKHHQIV 535
Query: 455 ---EKTISLLYGELRKWTSKCSFQIGP 478
EK ++ L EL K+ F++ P
Sbjct: 536 EMLEKRVNDLQKELAKFEQVKKFKLLP 562
>gi|418529723|ref|ZP_13095655.1| AMP-dependent synthetase and ligase [Comamonas testosteroni ATCC
11996]
gi|371453243|gb|EHN66263.1| AMP-dependent synthetase and ligase [Comamonas testosteroni ATCC
11996]
Length = 649
Score = 174 bits (441), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 128/396 (32%), Positives = 197/396 (49%), Gaps = 43/396 (10%)
Query: 60 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGY 119
++A VYTSGTTG PKGVMLTH N++ + ++ V A D FLS LP H +ER GY
Sbjct: 216 ELAGIVYTSGTTGKPKGVMLTHDNVVSDLHAVMQRVKAFPEDVFLSFLPLSHTFERTAGY 275
Query: 120 FI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 177
++ + G + Y +V L D+++ +P +ISVP +YE +Y+ +Q+ + +S ++
Sbjct: 276 YLAVATGSCVAYARSVAQLAQDMKQVRPTVLISVPRIYERVYAKVQESLASSPLKHKLFD 335
Query: 178 RALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVY 237
A+ + ++ FC + L A W A + P LL KLV
Sbjct: 336 EAV----------NKGWKSFCAHQGMHLGEQLDAKASW-------ASVLPGWLL-RKLVA 377
Query: 238 KKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLG 296
+ + + G + VSGG L I + +G+ + GYG+TE++PV++A N
Sbjct: 378 QPLLAQFGGRLRVAVSGGAPLSPTIARTFLGLGLPMVQGYGMTETAPVVSANGLDDNWPD 437
Query: 297 SVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNT 356
+VG + E++I G ++V G VM+GY+ P T +A DGWL T
Sbjct: 438 TVGRVLPGIEVRI-----------GEDQELQVSGPVVMRGYWNRPEDTAKAFTADGWLRT 486
Query: 357 GDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVV 416
GD I GR R ++GR K+ IV STGE V P ++E+A L L Q+ V
Sbjct: 487 GDQASI----EDGRIR-------IKGRIKEIIVTSTGEKVPPNDVEQAILVDPLFEQVFV 535
Query: 417 IGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASEL 452
+G+D+ I V + E M A+ + + D S L
Sbjct: 536 VGEDRPFIACIAVVSQMEWEMLARSVGLNPKDGSSL 571
>gi|319949400|ref|ZP_08023465.1| long-chain fatty-acid--CoA ligase [Dietzia cinnamea P4]
gi|319436930|gb|EFV91985.1| long-chain fatty-acid--CoA ligase [Dietzia cinnamea P4]
Length = 602
Score = 174 bits (441), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 133/416 (31%), Positives = 200/416 (48%), Gaps = 59/416 (14%)
Query: 32 DLGRESRKAFSDSNDARK-HYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRS 90
D G E+ +A +S +A T+ D A+ +YTSGTTG PKG +TH+NLL + +
Sbjct: 149 DGGLEALEADGESVEAETLDAAVATLELDTPASIIYTSGTTGRPKGCAITHRNLLSECHA 208
Query: 91 LYDI---VPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDD-------L 140
L D A+ G K L LP HV RA Y ++ + A DD
Sbjct: 209 LLDHPIGSMAQQGKKVLMFLPLAHVLARAVTYTVY------LGDATVGFWDDTSTILPRF 262
Query: 141 QRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLT 200
++PH ++ VP V+E + GI T +AA+ V R + + A G
Sbjct: 263 ADFRPHMILGVPRVFEKVRDGIA----TKAAAKGAVQRRIFERAEAVAIEDSRLRGNDGL 318
Query: 201 RNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIG-ISKAGVSGGGSLPM 259
+ ++PS L A AR L LVY+ I++A+G + +SGGG+LP
Sbjct: 319 DDARRPSLLHA------ARYKALDL---------LVYRAIRAALGGRCEYAISGGGALPD 363
Query: 260 HIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLP 319
I F+ GV V GYGLTES+ P C +G+VG P+ T ++I D+
Sbjct: 364 RISHFFRGAGVPVYEGYGLTESTAAATVNGPGCQRIGTVGRPVAGTSVRIADS------- 416
Query: 320 AGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLV 379
G V++ G + Y+ N AT +A+ DGW TGD+G + P G L
Sbjct: 417 ----GEVELAGELIFDRYWNNEEATAEAV-RDGWFATGDLGALDPD----------GYLT 461
Query: 380 LEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 435
+ GRAK+ IV + G+NV P ++E+A L+ V+IG+ ++ A+I D++E+
Sbjct: 462 ITGRAKEIIVTAGGKNVSPGQIEDAIRAHRLVGHAVLIGEARKFVSALITVDEDEL 517
>gi|343928139|ref|ZP_08767595.1| putative fatty-acid--CoA ligase [Gordonia alkanivorans NBRC 16433]
gi|343761939|dbj|GAA14521.1| putative fatty-acid--CoA ligase [Gordonia alkanivorans NBRC 16433]
Length = 612
Score = 174 bits (441), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 125/412 (30%), Positives = 211/412 (51%), Gaps = 51/412 (12%)
Query: 53 YETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHV 112
++ + +D+AT +YTSGTTG PKGV +TH+N++ ++ +L + + D+ +S LP H+
Sbjct: 172 WQAVEPEDLATLIYTSGTTGPPKGVEITHRNIVAEMAALAEKLDVGFDDRSISYLPAAHI 231
Query: 113 YERACGYFI-FSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSS 170
+R + RGI++ R + L P + VP V++ + +GI+ ++ S
Sbjct: 232 ADRVSSHAANLMRGIQITTVPDPREIATALPEVHPTFFFGVPRVWQKIRAGIEAKVAEES 291
Query: 171 AARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHL 230
+ V RAL +F A S A ID + ++ + H
Sbjct: 292 SP---VKRALAGWAFGVGA-----------------STAQARIDGKGSGLLGGV---QHG 328
Query: 231 LAEKLVYKKIQSAIGISK---AGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAA 287
+A+KLV K+++A+G+ + AG SG ++P+ + F+ +G+ + +G++E++ V
Sbjct: 329 IADKLVLHKVRAALGLDEVVFAG-SGAAAIPVEVLKFFLGLGIPILEVWGMSETTGVSTM 387
Query: 288 RRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQA 347
P +G+VG PI E+++ D G + VRG VM+GY P T +
Sbjct: 388 TTPDNLKIGTVGPPIRGMEVRLAD-----------DGELLVRGPVVMRGYRNQPEKTAET 436
Query: 348 LDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEA-AL 406
+D DGWL+TGDI I G V++++ R K+ I+ +G+N+ P +E A
Sbjct: 437 IDADGWLSTGDIAKI---------DDDGNVIIVD-RKKELIINESGKNMSPTNIENAMKA 486
Query: 407 RSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTI 458
SSLI Q+ IG + A++V D E V + AKRLS+ +AD +ELS I
Sbjct: 487 ASSLIGQVAAIGDSKPYVSALVVLDPEAVAVRAKRLSMPNADLAELSTHPEI 538
>gi|167764189|ref|ZP_02436316.1| hypothetical protein BACSTE_02573 [Bacteroides stercoris ATCC
43183]
gi|167698305|gb|EDS14884.1| AMP-binding enzyme [Bacteroides stercoris ATCC 43183]
Length = 601
Score = 174 bits (441), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 144/489 (29%), Positives = 225/489 (46%), Gaps = 71/489 (14%)
Query: 13 SVAPDIVEEIPVFSYDEIIDLGRE-SRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTT 71
SV D ++ ++ YDE + LG A + AR D+A +YTSGTT
Sbjct: 141 SVVRDPRDKTSIY-YDEFLALGEGLPHNAVVEERTARA-------SDSDLANILYTSGTT 192
Query: 72 GNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSM--LPPWHVYERACGYFIFSRGIELM 129
G PKGVML H N IR ++DI DK +SM LP HV+E+A YF RG+++
Sbjct: 193 GEPKGVMLHHFNYREAIR-IHDIRLTAMTDKDVSMNFLPLTHVFEKAWTYFCLHRGVQVC 251
Query: 130 YTAV-RNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYT 188
+++ ++ +P M SVP +E +Y+G+Q++I S R+ + +++ +
Sbjct: 252 VNLRPADIQTTIKEIRPTLMCSVPRFWEKVYAGVQEKIAQESGLRKAMMLDALKVGKMHN 311
Query: 189 AFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHL---LAEKLVYKKIQSAIG 245
ID+L A ++ LHL EK +Y ++ IG
Sbjct: 312 ------------------------IDYLRAGKTPPLM--LHLKYKFYEKTIYALLKKTIG 345
Query: 246 ISKAGV--SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPIN 303
I + G ++ I F ++G+ + VGYGLTES+ ++ +GSVG +
Sbjct: 346 IENGNFFPTAGAAVSDEICEFVHSVGINMVVGYGLTESTATVSCFLDKGYEIGSVGTVMP 405
Query: 304 HTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIA 363
E+KI E NE+L +RG + GY+K P AT A+D+DGW +TGD G++
Sbjct: 406 DLEVKI--GENNEIL---------LRGKTITTGYYKKPEATAAAIDKDGWFHTGDAGYLK 454
Query: 364 PHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRR 423
+H L L R KD S G+ + P LE I QI VI ++
Sbjct: 455 GNH-----------LYLTERIKDLFKTSNGKYISPQALETKLSIDRYIDQIAVIADQRKF 503
Query: 424 PGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSKCSF----QIGPI 479
A+IVP V AK + + D ++L + + L+ R T + F Q+
Sbjct: 504 VSALIVPVYGLVKNYAKEKGLEYKDMADLLQHPKVQALF-RARIDTLQQQFAHYEQVKRF 562
Query: 480 HVVDEPFTV 488
++ EPF++
Sbjct: 563 TLLSEPFSM 571
>gi|332525397|ref|ZP_08401558.1| AMP-dependent synthetase and ligase [Rubrivivax benzoatilyticus
JA2]
gi|332108667|gb|EGJ09891.1| AMP-dependent synthetase and ligase [Rubrivivax benzoatilyticus
JA2]
Length = 582
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 118/365 (32%), Positives = 189/365 (51%), Gaps = 47/365 (12%)
Query: 60 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGY 119
++A VYTSGTTG PKGVMLTH+N++ ++++ + D FLS LP H +ER GY
Sbjct: 163 ELAALVYTSGTTGKPKGVMLTHRNVMANVKAVLARIAPRPDDVFLSFLPLSHTFERTAGY 222
Query: 120 FI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 177
++ + G + + + ++L +D++ +P +ISVP +YE ++ +Q + S+ +R+
Sbjct: 223 YLPIAAGATVAFARSTQHLPEDMKTVRPTVLISVPRIYERVFVKLQTMLEGSALKKRLFE 282
Query: 178 RALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVY 237
A ++R FC + P + A D A++WP LLA + V
Sbjct: 283 MA------QAVGWRR----FCRAQKLPVPGSVPAAWD--------ALVWP--LLASR-VS 321
Query: 238 KKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLG 296
+Q+ G + VSGG +L I + +G+ + GYG+TES+PVI+ P N
Sbjct: 322 APLQAQFGGRLRLAVSGGAALSAPIARCFLGLGLPIVQGYGMTESTPVISCNTPEDNDPA 381
Query: 297 SVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNT 356
+VG P++ E++I D E+L VRG VM+GY+ P T +AL E GWL+T
Sbjct: 382 TVGRPLDGVEVRIGD--NRELL---------VRGPNVMRGYWNRPEDTARAL-EGGWLHT 429
Query: 357 GDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVV 416
GD ++ GG + + GR K+ IV +TGE + P +LE A + L
Sbjct: 430 GD-----------QASLDGGRIRIVGRVKEIIVTATGEKIAPTDLEMAIVADPLFEAAWA 478
Query: 417 IGQDQ 421
G ++
Sbjct: 479 FGDNR 483
>gi|148263653|ref|YP_001230359.1| AMP-dependent synthetase and ligase [Geobacter uraniireducens Rf4]
gi|146397153|gb|ABQ25786.1| AMP-dependent synthetase and ligase [Geobacter uraniireducens Rf4]
Length = 603
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 134/447 (29%), Positives = 215/447 (48%), Gaps = 59/447 (13%)
Query: 21 EIPVFSYDEI--IDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVM 78
E+PV ++ ++ IDL ++S + + IG D+ T +YTSGTTG PKGV
Sbjct: 147 ELPVCTFYQLSEIDL------PVTESEKKQLEAGIDCIGPTDLLTLIYTSGTTGVPKGVP 200
Query: 79 LTHKNLLHQ-IRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA--VRN 135
LTH+N+L + V + LS LP HV ER GY++ +M A +
Sbjct: 201 LTHRNILFDAFYTSRKAVVLRECEVHLSFLPLSHVLERTIGYYMMIMNGSMMAFADSIEK 260
Query: 136 LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYE 195
+ +++ +P M+SVP ++E +YS I + + S +R + I + Y + I
Sbjct: 261 VPENMMEVKPTVMVSVPRLFEKIYSRIFENVHQMSVVKRKLFHWAIEVGKKYVEARYI-- 318
Query: 196 GFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGG 254
+K+ S L+A + +A++LV+ K++ G + + SGG
Sbjct: 319 -------EKRTSPLLAF---------------KYNVADRLVFGKLRERFGGNMRLFCSGG 356
Query: 255 GSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAET 314
L I+ F+ IG+ + GYGLTE+SP ++ GSVG + HTEIK AE
Sbjct: 357 APLDKTINEFFWIIGLPILEGYGLTETSPAVSFNNFDQVRFGSVGTALEHTEIKT--AED 414
Query: 315 NEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRC 374
E+L +RG Q+M GY+K P+AT ++L +DGW TGDIG+I
Sbjct: 415 GELL---------IRGPQIMTGYYKEPAATGESL-QDGWFKTGDIGYIE----------- 453
Query: 375 GGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEE 434
G + + R K+ I+ + G+N+ P LE I V G + A++VP+ E
Sbjct: 454 NGFVYITDRKKELIITAGGKNIAPQPLENELKLDKYISSAFVYGDRKPYLTALLVPNMER 513
Query: 435 VLMAAKRLSIVHADASELSKEKTISLL 461
+L A+ I + D +L + ++ L
Sbjct: 514 LLEFAREKHIDYYDMDDLVIHEPVTRL 540
>gi|16271978|ref|NP_438175.1| long chain fatty acid CoA ligase [Haemophilus influenzae Rd KW20]
gi|260580694|ref|ZP_05848521.1| long chain fatty acid CoA ligase [Haemophilus influenzae RdAW]
gi|1170730|sp|P44446.1|LCFH_HAEIN RecName: Full=Putative long-chain-fatty-acid--CoA ligase; AltName:
Full=Long-chain acyl-CoA synthetase; Short=LACS
gi|1572946|gb|AAC21681.1| long chain fatty acid coA ligase, putative [Haemophilus influenzae
Rd KW20]
gi|260092756|gb|EEW76692.1| long chain fatty acid CoA ligase [Haemophilus influenzae RdAW]
Length = 607
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 127/405 (31%), Positives = 191/405 (47%), Gaps = 47/405 (11%)
Query: 60 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGY 119
D+ T +YTSGTTG PKGVML + NL HQ+ + + + D LS LP H++ERA
Sbjct: 186 DLFTIIYTSGTTGEPKGVMLDYANLAHQLETHDLSLNVTDQDISLSFLPFSHIFERAWAA 245
Query: 120 FIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 178
+I RG L Y N ++ L +P M +VP YE +Y+ + ++ + R+++
Sbjct: 246 YILHRGAILCYLEDTNQVRSALTEIRPTLMCAVPRFYEKIYAAVLDKVQKAPKLRQIMFH 305
Query: 179 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 238
I + Y F L N K +L L LA+KLV
Sbjct: 306 WAISVGQKY---------FDLRANNKAIPFL---------------LKKQFALADKLVLS 341
Query: 239 KIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 297
K++ +G K GG L I LF+ AIG+ +++GYG+TE++ ++ S
Sbjct: 342 KLRQLLGGRIKMMPCGGAKLEPAIGLFFHAIGINIKLGYGMTETTATVSCWHDFQFNPNS 401
Query: 298 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 357
+G + E+KI E NE+L VRG VM+GY+K P T QA EDG+L TG
Sbjct: 402 IGTLMPKAEVKI--GENNEIL---------VRGGMVMKGYYKKPEETAQAFTEDGFLKTG 450
Query: 358 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 417
D G G L + R K+ + S G+ + P +E + I QI +I
Sbjct: 451 DAGEFDEQ----------GNLFITDRIKELMKTSNGKYIAPQYIESKIGKDKFIEQIAII 500
Query: 418 GQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLY 462
++ A+IVP + + AK+L+I + D EL K I ++
Sbjct: 501 ADAKKYVSALIVPCFDSLEEYAKQLNIKYHDRLELLKNSDILKMF 545
>gi|227495094|ref|ZP_03925410.1| possible long-chain-fatty-acid--CoA ligase [Actinomyces coleocanis
DSM 15436]
gi|226831546|gb|EEH63929.1| possible long-chain-fatty-acid--CoA ligase [Actinomyces coleocanis
DSM 15436]
Length = 631
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 127/388 (32%), Positives = 188/388 (48%), Gaps = 71/388 (18%)
Query: 60 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLS------------ML 107
D+AT VYTSGTTG PKGV LTH N + A+NG K+++ L
Sbjct: 207 DLATVVYTSGTTGKPKGVELTHGNF---------TILAQNGHKWMAEIANHRRSRLLLFL 257
Query: 108 PPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQI 166
P HVY R F + G L +T +NL DL+ ++P Y+++VP V E +Y+ ++
Sbjct: 258 PLAHVYARFLEVFQLTGGGVLAHTPDTKNLLHDLESFRPSYLLAVPRVLEKIYNSAEQS- 316
Query: 167 FTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILW 226
+S + R + + AY+ EG T +
Sbjct: 317 -AASGMKLRTFRWAAKTAIAYSRALDTAEGPSKTLRAQ---------------------- 353
Query: 227 PLHLLAEKLVYKKIQSAI-GISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVI 285
H +A+ LVY+K++ + G K +SGGG L + FY +GV V GYGLTE++ +
Sbjct: 354 --HQMADALVYRKLKDLLGGHCKYVISGGGPLGERLGHFYRGLGVTVLEGYGLTETTAPL 411
Query: 286 AARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATK 345
A P + +G+VG PI+ +KI D T E+L V+G V +GY NP AT
Sbjct: 412 AVNTPRLSKIGTVGPPISTVGVKISD--TGEIL---------VKGPSVFRGYRNNPEATA 460
Query: 346 QALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAA 405
+A E+GW TGD+G S G L + GRAK+ +V + G+NV P LE++
Sbjct: 461 EAF-ENGWFKTGDLG----------SLDRDGYLRITGRAKELLVTAGGKNVSPAALEDSL 509
Query: 406 LRSSLIRQIVVIGQDQRRPGAIIVPDKE 433
L+ Q+VV+G + A++ D E
Sbjct: 510 RAHPLVSQVVVVGDKRPFIAALVTLDAE 537
>gi|264678464|ref|YP_003278371.1| long-chain-fatty-acid--CoA ligase [Comamonas testosteroni CNB-2]
gi|262208977|gb|ACY33075.1| long-chain-fatty-acid--CoA ligase [Comamonas testosteroni CNB-2]
Length = 649
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 130/434 (29%), Positives = 213/434 (49%), Gaps = 43/434 (9%)
Query: 60 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGY 119
++A VYTSGTTG PKGVMLTH N++ + ++ V A D FLS LP H +ER GY
Sbjct: 216 ELAGIVYTSGTTGKPKGVMLTHDNVVSDLHAVMQRVKAFPEDVFLSFLPLSHTFERTAGY 275
Query: 120 FI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 177
++ + G + Y +V L D+++ +P +ISVP +YE +Y+ +Q+ + +S ++
Sbjct: 276 YLAVATGSCVAYARSVAQLAQDMKQVKPTVLISVPRIYERVYAKVQESLASSPFKHKLFD 335
Query: 178 RALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVY 237
A+ + ++ A + + G + + + S+ AL WL +++ L L +L
Sbjct: 336 AAVNKGWKSFCAHQGMPLG---EQPEAKASWASALPGWLLRKLVAQPL--LAQFGGRL-- 388
Query: 238 KKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 297
+ VSGG L I + +G+ + GYG+TE++PV++A N +
Sbjct: 389 ----------RVAVSGGAPLSPTIARTFLGLGLPMVQGYGMTETAPVVSANGLDDNWPDT 438
Query: 298 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 357
VG + E++I D + ++V G VM+GY+ P T +A DGWL TG
Sbjct: 439 VGRVLPGIEVRIGDDQE-----------LQVSGQVVMRGYWNRPEDTAKAFTADGWLRTG 487
Query: 358 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 417
D I GR R ++GR K+ IV STGE V P ++E+A L L Q+ V+
Sbjct: 488 DQASI----ENGRIR-------IKGRIKEIIVTSTGEKVPPNDVEQAILVDPLFEQVFVV 536
Query: 418 GQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSKCSFQIG 477
G+D+ I V + E M A+ + + D S L + + T +
Sbjct: 537 GEDRPFIACIAVVGQVEWEMLARSVGLNPNDVSSLQHAAAEREALARIERQTRSFARYAV 596
Query: 478 P--IHVVDEPFTVN 489
P IH+V + + ++
Sbjct: 597 PRAIHLVRDSWNID 610
>gi|258625340|ref|ZP_05720239.1| Putative long-chain-fatty-acid--CoA ligase [Vibrio mimicus VM603]
gi|258582381|gb|EEW07231.1| Putative long-chain-fatty-acid--CoA ligase [Vibrio mimicus VM603]
Length = 601
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 135/435 (31%), Positives = 206/435 (47%), Gaps = 55/435 (12%)
Query: 54 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 113
E DD+ T +YTSGTTG PKGVML ++N+ Q+ + D L LP HV+
Sbjct: 173 EQADFDDLFTLIYTSGTTGTPKGVMLDYRNIGAQLEGHDQRLNLTQDDVSLCFLPLSHVF 232
Query: 114 ERACGYFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAA 172
ERA ++ +G Y V +++D L +P M +VP YE ++S I +++ +
Sbjct: 233 ERAWTAYVLYKGATNCYLHDVSHVRDALGEVRPTVMCAVPRFYEKIFSAIHEKVAKAPFI 292
Query: 173 RRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLA 232
R+V+ F + C + Q+QPS+L L H LA
Sbjct: 293 RKVL--------FTWAVNMGAKMAVC-RQQQRQPSWL---------------LKQNHQLA 328
Query: 233 EKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPT 291
+KLV K+++ +G + GG L I F+ AIG+ V++GYG+TE++ I+
Sbjct: 329 DKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTATISCWDDH 388
Query: 292 CNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDED 351
C S+G + ++KI E NE+L VRG VM+GY+K T + DE
Sbjct: 389 CFNPDSIGLSMPGAQVKI--GENNEIL---------VRGPMVMRGYYKLEKETADSFDEH 437
Query: 352 GWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLI 411
G+L TGD G I + G L + R K+ + S G+ + P +E A + I
Sbjct: 438 GFLKTGDAGHIDEN----------GNLFITDRIKELMKTSGGKYIAPQVIEGAIGKDHFI 487
Query: 412 RQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLLYG 463
QI VI ++ A+IVP + + AK L+I + D EL K EK ++ L
Sbjct: 488 EQIAVIADTRKFVSALIVPCFDSLEEYAKELNIKYHDRLELIKHSQVLEMFEKRVNELQK 547
Query: 464 ELRKWTSKCSFQIGP 478
EL K+ F++ P
Sbjct: 548 ELAKFEQVKKFKLLP 562
>gi|340751819|ref|ZP_08688629.1| long-chain-fatty-acid-CoA ligase [Fusobacterium mortiferum ATCC
9817]
gi|229420782|gb|EEO35829.1| long-chain-fatty-acid-CoA ligase [Fusobacterium mortiferum ATCC
9817]
Length = 829
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 125/398 (31%), Positives = 195/398 (48%), Gaps = 82/398 (20%)
Query: 44 SNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKF 103
N ++Y+ E + +A +YTSGTTGNPKGV+LT NL IR++ +I + D+
Sbjct: 122 ENFVPENYEVEIDDMERVALLLYTSGTTGNPKGVVLTFNNLESNIRAVREIELVNDQDRV 181
Query: 104 LSMLPPWHVYERAC--------GYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVY 155
L++LP H+ G F+ + L + LK L+++Q +I VP V+
Sbjct: 182 LAILPYHHILPLNLTLLMPMYFGTFL----VILEELSSEALKLALKKHQISVIIGVPRVW 237
Query: 156 ETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDW 215
E L+ I +I ++ A+++ C N
Sbjct: 238 EMLHKAIMGKINSNFVAKKLF-------------------NLCKKVNS------------ 266
Query: 216 LWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQV 274
L K V+KK+ +G + + VSGG L + ++ +G+ +
Sbjct: 267 --------------LALSKKVFKKVADELGGNMRVLVSGGAKLDPEVSANFKVLGLPIIE 312
Query: 275 GYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVM 334
GYGLTE+SP+IA RP NV+GS G I + E+KI AE E+L VRG+ VM
Sbjct: 313 GYGLTETSPIIAFNRPNNNVIGSAGQLIPNIEVKI--AEDEEIL---------VRGANVM 361
Query: 335 QGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGE 394
+GY+KNP AT +A+D DGW +TGD+G + G L + GR K+ IVLS G+
Sbjct: 362 KGYYKNPQATSEAIDSDGWFHTGDLG-----------KFEGDSLFIIGRKKEMIVLSNGK 410
Query: 395 NVEPLELEEAALR-SSLIRQIVVIGQDQRRPGAIIVPD 431
N+ P ++E A L+ + L+++I V+ + A++ PD
Sbjct: 411 NINPGDIESAILKETDLVKEIAVMEYNNHL-MAVVYPD 447
>gi|271964208|ref|YP_003338404.1| long-chain-fatty-acid--CoA ligase [Streptosporangium roseum DSM
43021]
gi|270507383|gb|ACZ85661.1| putative long-chain-fatty-acid--CoA ligase [Streptosporangium
roseum DSM 43021]
Length = 597
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 122/383 (31%), Positives = 185/383 (48%), Gaps = 54/383 (14%)
Query: 57 GSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSL----YDIVPAENGDKFLSMLPPWHV 112
G+ D+AT VYTSGTTG PKG LTH NLL R++ + + G L LP HV
Sbjct: 176 GAADLATIVYTSGTTGRPKGCSLTHDNLLFTARNVAAGPLEPLFTAAGRAALLFLPLAHV 235
Query: 113 YERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSA 171
+ R + G L +T ++N+ DLQ ++P +++ VP V+E +Y+G +++
Sbjct: 236 FARMIQLVLIETGTVLAHTPNMKNVAPDLQAFKPTFLLGVPRVFEKVYNGAEQKAAGDGK 295
Query: 172 ARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLL 231
++ A A I+++ ++ P + L H L
Sbjct: 296 SKIFHAAADTAIAWSRA------------QSAGGPGLGLRL---------------RHTL 328
Query: 232 AEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRP 290
+KLVY K+++A G A VSGG +L + F+ +G++V G+GLTE+S A P
Sbjct: 329 FDKLVYGKLRAATGGRLSAAVSGGSALGERLAHFFRGVGIEVFEGWGLTETSAPSAVNMP 388
Query: 291 TCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDE 350
N +G+VG P I I G G V V+G V GY+ + AT +A+D
Sbjct: 389 GANKIGTVGKPFPGVTIGI-----------GDDGEVLVKGRHVFAGYWNDDKATGEAIDA 437
Query: 351 DGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSL 410
DGW +TGD+G + G L + GR K+ +V + G+NV P +E+ L
Sbjct: 438 DGWFHTGDVGELDKD----------GYLRITGRKKEILVTAAGKNVAPAPMEDLIRAHPL 487
Query: 411 IRQIVVIGQDQRRPGAIIVPDKE 433
I Q +V+G D+ AII D E
Sbjct: 488 ISQAMVVGDDRPFVAAIITLDPE 510
>gi|312139004|ref|YP_004006340.1| acyl-CoA ligase/synthetase [Rhodococcus equi 103S]
gi|311888343|emb|CBH47655.1| putative acyl-CoA ligase/synthetase [Rhodococcus equi 103S]
Length = 597
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 118/383 (30%), Positives = 195/383 (50%), Gaps = 52/383 (13%)
Query: 56 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAE---NGDKFLSMLPPWHV 112
+ +DD+A+ VYTSGTTG PKG +LTH+N L ++R + E G++ L+ LP HV
Sbjct: 172 VSADDLASLVYTSGTTGRPKGCILTHRNFLSEVRGILVASIGEVARPGNRMLTFLPLAHV 231
Query: 113 YERACGYFIF-SRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSA 171
RA +F + GI+ ++ + + +R++P+ ++ VP V+E ++ S+A
Sbjct: 232 LARAVSLAMFEAGGIQAHWSNFGTVAEQFERFRPNVILGVPRVFE--------KVRDSAA 283
Query: 172 ARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLL 231
+ R +FA+ I + + + PS+L L AR H L
Sbjct: 284 HTASKGGPIARAAFAFAESTAIE--YSESLDAGGPSFL------LKAR---------HAL 326
Query: 232 AEKLVYKKIQSAIGISK-AGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRP 290
A++LV++K+++A+G +SGGG+L + F+ G+ + GYGLTES+ P
Sbjct: 327 ADRLVFRKLRAAMGDECWWAISGGGALMPRLGHFFRGAGIPIFEGYGLTESTAAHCVNVP 386
Query: 291 TCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDE 350
+G+VG P++ ++I + G +++ G V GY++N AT D
Sbjct: 387 GEQKIGTVGRPMSGNSVRIA-----------ADGEIELAGGVVFGGYWRNEEATVDVFD- 434
Query: 351 DGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSL 410
DGW+ TGD+G + G L+L GR KD +V + G+NV P LE+ ++L
Sbjct: 435 DGWMRTGDLGELDDD----------GYLILTGRKKDLLVTAGGKNVSPGPLEDRLRSNAL 484
Query: 411 IRQIVVIGQDQRRPGAIIVPDKE 433
I Q VV+G + GA++ D E
Sbjct: 485 ISQAVVVGDGRPFIGALLTLDPE 507
>gi|407783917|ref|ZP_11131108.1| AMP-dependent synthetase and ligase [Oceanibaculum indicum P24]
gi|407199170|gb|EKE69192.1| AMP-dependent synthetase and ligase [Oceanibaculum indicum P24]
Length = 602
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 134/439 (30%), Positives = 215/439 (48%), Gaps = 58/439 (13%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAEN-GDK-FLSMLPPWHVYERA 116
DD+A +YTSGT G PKGVML+H+ + + S +D++ GD+ FLS LP H YE
Sbjct: 182 DDLACLIYTSGTGGAPKGVMLSHRAIFCNLVSAFDLLHEFGLGDEVFLSFLPLSHSYEHT 241
Query: 117 CG-YFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARR 174
CG +F S G ++ Y L +LQ +P M +VP +YE L+ I + + +R
Sbjct: 242 CGLFFPISIGAQIYYAEGADTLAANLQEAKPTIMTAVPRLYEVLHGRILAGVERAGGKKR 301
Query: 175 VVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEK 234
+ + + KRI + L+ +K +LL +
Sbjct: 302 DLFMKALEL-----GRKRIEQPGSLSLGEKA----------------------FNLLLDL 334
Query: 235 LVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCN 293
LV +K++ +G KA +SGG L + +F+ A+G+++ GYG TE++PV++ RP
Sbjct: 335 LVRRKVRQRMGGRLKAFISGGAPLNYEVGMFFLALGIRLCQGYGQTEAAPVVSCNRPRRI 394
Query: 294 VLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGW 353
+ +VG P+ E+++ A E+L VRG +M GY+ +P AT++AL DGW
Sbjct: 395 RIETVGPPLKGVEVRL--APDGEIL---------VRGELLMDGYWDDPEATEKAL-IDGW 442
Query: 354 LNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQ 413
L+TGDIG I P G + + R +D IV+S G+N+ P +E I Q
Sbjct: 443 LHTGDIGEIDPD----------GYIRITDRKRDIIVISGGDNISPQRVEGFVTLQPEINQ 492
Query: 414 IVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSKCS 473
+V G + +IVP ++ V AK V + +EL+ +K GE+ ++
Sbjct: 493 AMVYGDKRPYLVGLIVPAQDFVESYAKGKG-VAPNLAELAGDKDFRAAIGEVLDRVNRDL 551
Query: 474 FQIGPIH---VVDEPFTVN 489
+ + + EPFT +
Sbjct: 552 SSLEKVRRFVIATEPFTTD 570
>gi|84393678|ref|ZP_00992428.1| putative long-chain-fatty-acid-CoA ligase [Vibrio splendidus 12B01]
gi|84375677|gb|EAP92574.1| putative long-chain-fatty-acid-CoA ligase [Vibrio splendidus 12B01]
Length = 602
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 128/430 (29%), Positives = 206/430 (47%), Gaps = 55/430 (12%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 118
DD+ T +YTSGTTG PKGVML + N+ +Q++ + + D L LP HV+ERA
Sbjct: 178 DDLLTLIYTSGTTGQPKGVMLDYTNVGYQLKGHDERLSLSKDDVSLCFLPLSHVFERAWT 237
Query: 119 YFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 177
+++ +G Y ++D L +P M +VP YE ++S I +++ + R+V+
Sbjct: 238 FYVLYKGATNCYLQDTMQVRDALSDVKPTVMSAVPRFYEKIFSAIHEKVSKAPFIRKVLF 297
Query: 178 RALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVY 237
+ + + + EG + PS++ L H LA+KLV
Sbjct: 298 TWAVNMGAKLSVCHQ--EG-------RTPSFM---------------LKKSHALADKLVL 333
Query: 238 KKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLG 296
K+++ +G + + GG L I F+ AIG+ V++GYG+TE++ ++ C
Sbjct: 334 SKLRALLGGNINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTATVSCWDDRCFNPD 393
Query: 297 SVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNT 356
S+G + E+KI G+K + VRG VM+GY+K P T + DE G+L T
Sbjct: 394 SIGMSMPGAEVKI-----------GAKDEILVRGPMVMRGYYKMPEETAKTFDEHGFLKT 442
Query: 357 GDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVV 416
GD G + G L + R K+ + S G+ + P +E A + I QI V
Sbjct: 443 GDAGHFDEN----------GNLFITDRIKELMKTSGGKYIAPQVVEGAIGKDHFIEQIAV 492
Query: 417 IGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLLYGELRKW 468
I ++ A+IVP + + AK L+I + D EL K EK ++ L EL K+
Sbjct: 493 IADTRKFVSALIVPCYDSLEEYAKELNIKYHDRVELVKHHQIVEMLEKRVNDLQQELAKF 552
Query: 469 TSKCSFQIGP 478
F++ P
Sbjct: 553 EQVKKFKLLP 562
>gi|387792640|ref|YP_006257705.1| AMP-forming long-chain acyl-CoA synthetase [Solitalea canadensis
DSM 3403]
gi|379655473|gb|AFD08529.1| AMP-forming long-chain acyl-CoA synthetase [Solitalea canadensis
DSM 3403]
Length = 631
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 124/436 (28%), Positives = 220/436 (50%), Gaps = 52/436 (11%)
Query: 52 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWH 111
++++I +D A YTSGTT +PKG++L+H+N + ++ K L +LP H
Sbjct: 168 RFKSIKGNDYANISYTSGTTADPKGIILSHRNYTSNVEQALSLMNIPANWKTLIILPLDH 227
Query: 112 VYERACGYFIF----------SRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSG 161
+ G++ F G M T ++N+ ++Q +P+ ++SVP + +
Sbjct: 228 CFAHVAGFYSFMASGASVATVDPGKNAMDT-LKNIPVNMQEIKPNLLLSVPALAKNFKKN 286
Query: 162 IQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARII 221
I+ I + ++I++AY EGF N+ Q + +V
Sbjct: 287 IESAIKQKGGITEKLFNHALKIAYAYNR-----EGF----NKGQGASIV----------- 326
Query: 222 CAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDL--FYEAIGVKVQVGYGLT 279
PL +K+++ K+++A G + GGG+L + IDL F+ AIGV + GYGL+
Sbjct: 327 ---YKPLLAFYDKILFSKVRNAFGGELSFFIGGGAL-LDIDLQRFFYAIGVPMFQGYGLS 382
Query: 280 ESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFK 339
E++P+I++ + LGS G+ + E+KI D + N LP G KG + ++G VM GY+K
Sbjct: 383 EATPIISSNSLKKHKLGSSGYLVKPMELKICDEQGNS-LPVGQKGEIVIKGENVMMGYWK 441
Query: 340 NPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPL 399
N +AT + ++GWL+TGD+G++ G L + GR K ++ S GE P
Sbjct: 442 NETATADTI-KNGWLHTGDLGYM----------DSDGFLYVLGRFKSLLIGSDGEKYSPE 490
Query: 400 ELEEAALRSS-LIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTI 458
+EE+ + +S I Q+++ A++VP+KE + ++ + SE K++ I
Sbjct: 491 GIEESLVENSKFIDQVMLHNNQDAYTTALLVPNKESLKSYLRQKGLNW--ESEEGKKEAI 548
Query: 459 SLLYGELRKWTSKCSF 474
+L E+ ++ S+ F
Sbjct: 549 KMLQAEVNEYKSQGKF 564
>gi|42524534|ref|NP_969914.1| long-chain fatty-acid-CoA ligase [Bdellovibrio bacteriovorus HD100]
gi|39576743|emb|CAE80907.1| long-chain fatty-acid-CoA ligase [Bdellovibrio bacteriovorus HD100]
Length = 593
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 130/425 (30%), Positives = 204/425 (48%), Gaps = 52/425 (12%)
Query: 55 TIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYE 114
++ +DIAT +YTSGTTG PKGV++TH + ++ + + A D LS LP H+
Sbjct: 173 SLTQEDIATILYTSGTTGRPKGVVMTHLQAISEVSEAFPLCGATEADTSLSFLPYAHILG 232
Query: 115 RACGYFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 173
R + G L + ++ ++ +L +P +MISVP ++E +Y+ + QI T
Sbjct: 233 RIEHWGHAYIGFTLAFAESLEKIRGNLTEVRPTFMISVPRIFEKIYAAVIAQIQTQPLKM 292
Query: 174 RVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAE 233
+V AL I +K + +++ L + LA+
Sbjct: 293 KVFNWAL-EIGTKVGEYK------------------------MSGQVLPLDLLVKYELAK 327
Query: 234 KLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTC 292
KLV KI +A G + +SGG +P I LF+ A G+ + GYGLTE++ + P
Sbjct: 328 KLVLDKIPTAFGGRLRFAISGGAPIPREIALFFHAAGILILEGYGLTETTAAVTVNTPFN 387
Query: 293 NVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDG 352
GSVG PI ++KI AE E+L V+ +VM+ Y+KNP ATK+A DG
Sbjct: 388 YKFGSVGRPIGEVKLKI--AEDGEIL---------VKSDKVMKEYYKNPEATKEAFT-DG 435
Query: 353 WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIR 412
W +TGDIG I P GG L + R KD I + G+ V P LE S I
Sbjct: 436 WFHTGDIGEILP----------GGDLKITDRKKDLIKTAGGKYVAPQRLEGLLSLSPYIA 485
Query: 413 QIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSKC 472
++V G ++ A++ D+ V AK + ++D + L + + L +RK ++
Sbjct: 486 NVLVHGDQRKYIVALVTLDRPTVENLAKEKQVSYSDWNSLVQSPFVQDL---IRKAVAET 542
Query: 473 SFQIG 477
+ Q+
Sbjct: 543 NSQLA 547
>gi|381165792|ref|ZP_09875019.1| AMP-dependent synthetase and ligase [Phaeospirillum molischianum
DSM 120]
gi|380685282|emb|CCG39831.1| AMP-dependent synthetase and ligase [Phaeospirillum molischianum
DSM 120]
Length = 612
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 157/492 (31%), Positives = 227/492 (46%), Gaps = 92/492 (18%)
Query: 20 EEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIG--SDDIATYVYTSGTTGNPKGV 77
E I S+DE++ LGR S A H + G D A ++TSGT G PKGV
Sbjct: 149 EGIVRHSWDEVMALGRAS--------GAEAHVRARVAGLRRDHTACIIHTSGTGGVPKGV 200
Query: 78 MLTHKNLLHQIRSLYDIVPAENG-----DKFLSMLPPWHVYERACGYFI-FSRGIELMYT 131
ML+H +LH +V NG + FLS LP H YE G F+ S G + Y
Sbjct: 201 MLSHGAILHNCYGAAVLVDDLNGGVHCDEVFLSFLPLSHAYEHTAGLFLPISIGATIYYA 260
Query: 132 -AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAF 190
++ +L ++ +P M +VP +Y+++ I K + R+ + A + +
Sbjct: 261 DSIEHLSANMLEVRPTIMTAVPRLYDSIRIRILKGLGKVGRLRQTLFHAALSL-----GE 315
Query: 191 KRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KA 249
+RI +G L +D L R++ +++V KI+ G KA
Sbjct: 316 RRIAQGGRL-----------GPLDSLADRVL-----------DRVVRDKIRDRFGGRLKA 353
Query: 250 GVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKI 309
VSGG LP + F+ ++GV + GYG TE++PVI+ RP + SVG I EI+I
Sbjct: 354 FVSGGAPLPPEVGRFFLSLGVTILQGYGQTEAAPVISVNRPGRVRVESVGPVIEGVEIRI 413
Query: 310 VDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRG 369
A E+L VRG VMQGY+++P++T A+D DGWL+TGDIG I P
Sbjct: 414 --AADGEIL---------VRGEMVMQGYWQDPASTAAAIDPDGWLHTGDIGVIDPD---- 458
Query: 370 RSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPG--AI 427
G L + R KD IV S G+NV P +E I Q +V G RRP A+
Sbjct: 459 ------GNLRITDRKKDIIVNSGGDNVSPQRIECLLTLQPGIAQAMVHG--DRRPHLVAL 510
Query: 428 IVPDKEEVLM----AAKRLSIVHADASELSKEKTISLLYGELRKWTSKCSFQIGPIH--- 480
IVPD + V A +R+ I H L E+ + + + P+
Sbjct: 511 IVPDPDRVQALGAPARERVVIEH------------PRLKAEIAHAVEQVNAHLAPVERIR 558
Query: 481 ---VVDEPFTVN 489
V+ EPF+V
Sbjct: 559 RFTVLAEPFSVE 570
>gi|409098435|ref|ZP_11218459.1| AMP-dependent synthetase and ligase [Pedobacter agri PB92]
Length = 591
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 135/455 (29%), Positives = 215/455 (47%), Gaps = 70/455 (15%)
Query: 22 IPVFSYDEI---------IDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTG 72
I +FS+ +I I+ G+ S+ D ++ + +DI T +YTSGTTG
Sbjct: 132 IKIFSFSDIEGVTCWETLIEDGKNSQDINLDDYRSK-------VEPEDILTLIYTSGTTG 184
Query: 73 NPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGY-FIFSRGIELMYT 131
PKGVMLTH NL+ + ++P + +K LS LP H++ER Y ++F++
Sbjct: 185 TPKGVMLTHDNLVANFVNSSVVMP-DGVNKSLSFLPLSHIFERMIIYLYLFNKTSIYYAE 243
Query: 132 AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFK 191
++ + D+Q +P+ +VP + E +Y I ++ + + +R + + ++ YT
Sbjct: 244 SMDTIVADIQHVKPNAFSTVPRLLEKVYDKIMEKGKSLTGIKRGIFFWSVALAEKYTTDA 303
Query: 192 RIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAG- 250
+ F L +A KLV+KK Q A+G
Sbjct: 304 GAWYNFKLG------------------------------IARKLVFKKWQEALGGEIVVI 333
Query: 251 VSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIV 310
VSGG +L + + A G+ V GYGLTE+SPVI + G+VG I E+KI
Sbjct: 334 VSGGAALNPRLARIFWAAGMPVFEGYGLTETSPVITVNHFGGTMFGTVGEVIKGVEVKI- 392
Query: 311 DAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGR 370
A+ EVL RG QVM+GY+ P TK+A+D +GW +TGDIG +
Sbjct: 393 -AQDGEVL---------TRGHQVMKGYYNRPDLTKEAIDAEGWFHTGDIGELID------ 436
Query: 371 SRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVP 430
G L + R K+ + G+ V P LE S I QI+V+G++++ P A+IVP
Sbjct: 437 ----GRFLKITDRKKEMFKTAGGKYVAPQILENKYKESIFIEQIMVLGENRKFPSALIVP 492
Query: 431 DKEEVLMAAKRLSIVHADASELSKEKTISLLYGEL 465
+ E + A + I E+ K + + + E+
Sbjct: 493 NFETLKTWAAKKGINFTTNEEIIKNEQVLAKFNEI 527
>gi|218708425|ref|YP_002416046.1| long-chain-fatty-acid--CoA ligase [Vibrio splendidus LGP32]
gi|218321444|emb|CAV17396.1| Long-chain-fatty-acid--CoA ligase [Vibrio splendidus LGP32]
Length = 602
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 128/430 (29%), Positives = 206/430 (47%), Gaps = 55/430 (12%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 118
DD+ T +YTSGTTG PKGVML + N+ +Q++ + + D L LP HV+ERA
Sbjct: 178 DDLLTLIYTSGTTGQPKGVMLDYTNVGYQLKGHDERLSLSKDDVSLCFLPLSHVFERAWT 237
Query: 119 YFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 177
+++ +G Y ++D L +P M +VP YE ++S I +++ + R+V+
Sbjct: 238 FYVLYKGATNCYLQDTMQVRDALSDVKPTVMSAVPRFYEKIFSAIHEKVSKAPFIRKVLF 297
Query: 178 RALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVY 237
+ + + + EG + PS++ L H LA+KLV
Sbjct: 298 TWAVNMGAKLSVCHQ--EG-------RTPSFM---------------LKKSHALADKLVL 333
Query: 238 KKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLG 296
K+++ +G + + GG L I F+ AIG+ V++GYG+TE++ ++ C
Sbjct: 334 SKLRALLGGNINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTATVSCWDDRCFNPD 393
Query: 297 SVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNT 356
S+G + E+KI G+K + VRG VM+GY+K P T + DE G+L T
Sbjct: 394 SIGMSMPGAEVKI-----------GAKDEILVRGPMVMRGYYKMPEETAKTFDEHGFLKT 442
Query: 357 GDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVV 416
GD G + G L + R K+ + S G+ + P +E A + I QI V
Sbjct: 443 GDAGHFDEN----------GNLFITDRIKELMKTSGGKYIAPQVVEGAIGKDHFIEQIAV 492
Query: 417 IGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLLYGELRKW 468
I ++ A+IVP + + AK L+I + D EL K EK ++ L EL K+
Sbjct: 493 IADTRKFVSALIVPCYDSLEEYAKELNIKYHDRVELVKNHQIVEMLEKRVNDLQQELAKF 552
Query: 469 TSKCSFQIGP 478
F++ P
Sbjct: 553 EQVKKFKLLP 562
>gi|325673718|ref|ZP_08153409.1| long-chain-fatty-acid--CoA ligase [Rhodococcus equi ATCC 33707]
gi|325555739|gb|EGD25410.1| long-chain-fatty-acid--CoA ligase [Rhodococcus equi ATCC 33707]
Length = 602
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 119/384 (30%), Positives = 196/384 (51%), Gaps = 54/384 (14%)
Query: 56 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAE---NGDKFLSMLPPWHV 112
+ +DD+A+ VYTSGTTG PKG +LTH+N L ++R + E G++ L+ LP HV
Sbjct: 177 VSADDLASLVYTSGTTGRPKGCILTHRNFLSEVRGILVASIGEVARPGNRMLTFLPLAHV 236
Query: 113 YERACGYFIF-SRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSA 171
RA +F + G + ++ + + +R++P+ ++ VP V+E ++ S+A
Sbjct: 237 LARAVSLAMFEAGGTQAHWSNFGTVAEQFERFRPNVILGVPRVFE--------KVRDSAA 288
Query: 172 ARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLL 231
+ R +FA+ I + + + PS+L L AR H L
Sbjct: 289 HTASKGGPIARAAFAFAESTAIE--YSESLDAGGPSFL------LKAR---------HAL 331
Query: 232 AEKLVYKKIQSAIGISK-AGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRP 290
A++LV++K+++A+G +SGGG+L + F+ G+ + GYGLTES+ P
Sbjct: 332 ADRLVFRKLRAAMGDECWWAISGGGALMPRLGHFFRGAGIPIFEGYGLTESTAAHCVNVP 391
Query: 291 TCNVLGSVGHPINHTEIKI-VDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALD 349
+G+VG P++ ++I VD E +++ G V GY++N AT D
Sbjct: 392 GEQKIGTVGRPMSGNSVRIAVDGE------------IELAGGVVFGGYWRNEEATADVFD 439
Query: 350 EDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSS 409
DGW+ TGD+G + G L+L GR KD +V ++G+NV P LE+ ++
Sbjct: 440 -DGWMRTGDLGELDDD----------GYLILTGRKKDLLVTASGKNVSPGPLEDRLRSNA 488
Query: 410 LIRQIVVIGQDQRRPGAIIVPDKE 433
LI Q VV+G + GA++ D E
Sbjct: 489 LISQAVVVGDGRPFIGALLTLDPE 512
>gi|451944815|ref|YP_007465451.1| acyl-CoA synthetase [Corynebacterium halotolerans YIM 70093 = DSM
44683]
gi|451904202|gb|AGF73089.1| acyl-CoA synthetase [Corynebacterium halotolerans YIM 70093 = DSM
44683]
Length = 610
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 131/400 (32%), Positives = 195/400 (48%), Gaps = 57/400 (14%)
Query: 45 NDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYD------IVPAE 98
+DA + I +D+A+ VYTSGTTG PKG +LTH+N +HQIR+L VP
Sbjct: 174 DDAEVDRRIAGIRHEDLASLVYTSGTTGKPKGCILTHRNWIHQIRALLTHPIGAIAVP-- 231
Query: 99 NGDKFLSMLPPWHVYERACGYFIFSRG-IELMYTAVRNLKDDLQRYQPHYMISVPLVYET 157
G + L+ LP HV RA + G + ++ V L + QR +PH ++ VP V+E
Sbjct: 232 -GTRILTYLPMAHVLARAVSLAVVIGGATQSHWSDVSTLTVEFQRTRPHMILGVPRVFEK 290
Query: 158 LYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLW 217
+ ++AA + ++ A K E PS ++A
Sbjct: 291 VR---------NAAANKAADGGPLKAKIFERAEKTAVEYSKALDTPDGPSRVLA------ 335
Query: 218 ARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGY 276
AR L ++LVY K++SA+G + K ++GG ++ + F+ +G+ V GY
Sbjct: 336 AR---------RRLYDRLVYSKLKSAVGGAVKYCITGGSAMSPELRHFFRGVGLPVYEGY 386
Query: 277 GLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQG 336
GLTE+ AA T +G+VG P+ KI DA G + +RG V G
Sbjct: 387 GLTETC-AAAAVDFTDVRIGTVGQPLGGYSAKINDA-----------GEICIRGEGVFAG 434
Query: 337 YFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENV 396
Y+ NP AT +ALD GW NTGD+G I G +++ GR KD IV + G+NV
Sbjct: 435 YWNNPEATAEALDVGGWFNTGDLGEIDET----------GHIIITGRKKDLIVTAGGKNV 484
Query: 397 EPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVL 436
P LEE LI Q +V+G + GA++ D++ +L
Sbjct: 485 SPAPLEEKLASHPLISQALVVGDGKPFIGALVTLDEDSLL 524
>gi|145629146|ref|ZP_01784945.1| long chain fatty acid CoA ligase [Haemophilus influenzae 22.1-21]
gi|145633445|ref|ZP_01789175.1| long chain fatty acid CoA ligase [Haemophilus influenzae 3655]
gi|145639710|ref|ZP_01795313.1| long chain fatty acid CoA ligase [Haemophilus influenzae PittII]
gi|148825717|ref|YP_001290470.1| long chain fatty acid CoA ligase [Haemophilus influenzae PittEE]
gi|144978649|gb|EDJ88372.1| long chain fatty acid CoA ligase [Haemophilus influenzae 22.1-21]
gi|144986008|gb|EDJ92610.1| long chain fatty acid CoA ligase [Haemophilus influenzae 3655]
gi|145271267|gb|EDK11181.1| long chain fatty acid CoA ligase [Haemophilus influenzae PittII]
gi|148715877|gb|ABQ98087.1| long chain fatty acid CoA ligase [Haemophilus influenzae PittEE]
Length = 599
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 129/409 (31%), Positives = 194/409 (47%), Gaps = 48/409 (11%)
Query: 60 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGY 119
D+ T +YTSGTTG PKGVML + NL HQ+ + + + D LS LP H++ERA
Sbjct: 178 DLFTIIYTSGTTGEPKGVMLDYANLAHQLETHDLSLNVTDQDISLSFLPFSHIFERAWAA 237
Query: 120 FIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 178
+I RG L Y N ++ L +P M +VP YE +Y+ + ++ + R+++
Sbjct: 238 YILHRGAILCYLEDTNQVRSALTEIRPTLMCAVPRFYEKIYAAVLDKVQKAPKLRQIMFH 297
Query: 179 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 238
I + + F L N K +L L LA+KLV
Sbjct: 298 WAISVG---------QKHFDLRANNKAIPFL---------------LKKQFALADKLVLS 333
Query: 239 KIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 297
K++ +G K GG L I LF+ AIG+ +++GYG+TE++ ++ S
Sbjct: 334 KLRQLLGGRIKMMPCGGAKLEPAIGLFFHAIGINIKLGYGMTETTATVSCWHDFQFNPNS 393
Query: 298 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 357
+G + E+KI E NE+L VRG VM+GY+K P T QA EDG+L TG
Sbjct: 394 IGTLMPKAEVKI--GENNEIL---------VRGGMVMKGYYKKPEETAQAFTEDGFLKTG 442
Query: 358 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 417
D G G L + R K+ + S G+ + P +E + I QI +I
Sbjct: 443 DAGEFDEQ----------GNLFITDRIKELMKTSNGKYIAPQYIESKIGKDKFIEQIAII 492
Query: 418 GQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELR 466
++ A+IVP + + AK+L+I + D EL K I ++ ELR
Sbjct: 493 ADAKKYVSALIVPCFDSLEEYAKQLNIKYHDRLELLKNSDILKMF-ELR 540
>gi|373467688|ref|ZP_09558982.1| AMP-binding enzyme [Haemophilus sp. oral taxon 851 str. F0397]
gi|371758409|gb|EHO47182.1| AMP-binding enzyme [Haemophilus sp. oral taxon 851 str. F0397]
Length = 602
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 126/407 (30%), Positives = 192/407 (47%), Gaps = 47/407 (11%)
Query: 60 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGY 119
D+ T +YTSGTTG PKGVML + NL HQ+ + + + D LS LP H++ERA
Sbjct: 178 DLFTIIYTSGTTGEPKGVMLDYANLAHQLETHDLSLNVTDQDVSLSFLPFSHIFERAWAA 237
Query: 120 FIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 178
+I +G L Y N ++ L +P M +VP YE +Y+ + ++ + R+++
Sbjct: 238 YILHKGAILCYLEDTNQVRSALTEIRPTLMCAVPRFYEKIYAAVLDKVQKAPKLRQIMFH 297
Query: 179 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 238
I + + F L N K +L L LA+KLV
Sbjct: 298 WAISVGQKH---------FDLRANNKAIPFL---------------LKKQFALADKLVLS 333
Query: 239 KIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 297
K+ +G S K GG L I LF+ AIG+ +++GYG+TE++ ++ S
Sbjct: 334 KLHQLLGGSIKMMPCGGAKLEPAIGLFFHAIGINIKLGYGMTETTATVSCWHDFQFNPNS 393
Query: 298 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 357
+G + E+KI E NE+L VRG VM+GY+K P T QA EDG+L TG
Sbjct: 394 IGTLMPKAEVKI--GENNEIL---------VRGGMVMKGYYKKPEETAQAFTEDGFLKTG 442
Query: 358 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 417
D G G L + R K+ + S G+ + P +E + I QI +I
Sbjct: 443 DAGEFDEQ----------GNLFITDRIKELMKTSNGKYIAPQYIESKIGKDKFIEQIAII 492
Query: 418 GQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGE 464
++ A+IVP + + AK+L+I + D EL K I ++ +
Sbjct: 493 ADTKKYVSALIVPCFDSLEEYAKQLNIKYHDRLELLKNSEILKMFEQ 539
>gi|229514108|ref|ZP_04403570.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae TMA 21]
gi|229349289|gb|EEO14246.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae TMA 21]
Length = 601
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 138/466 (29%), Positives = 218/466 (46%), Gaps = 63/466 (13%)
Query: 31 IDLGRESRKAFSDSNDARKHYKY--------ETIGSDDIATYVYTSGTTGNPKGVMLTHK 82
IDL + S D A+ H++ E DD+ T +YTSGTTG PKGVML ++
Sbjct: 142 IDLKQASCAMHWDEFVAQSHHQVRAPLDALIEQANYDDLFTLIYTSGTTGTPKGVMLDYR 201
Query: 83 NLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQ 141
N+ Q+ + + D L LP HV+ERA ++ +G Y V ++++ L
Sbjct: 202 NIGAQLEGHDERLNLTQEDVSLCFLPLSHVFERAWTAYVLYKGATNCYLQDVAHVREALA 261
Query: 142 RYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTR 201
+P M +VP YE ++S I +++ + R+V+ F + C +
Sbjct: 262 EVRPTVMCAVPRFYEKIFSAIHEKVAKAPLVRKVL--------FTWAVNMGAKMAVC-RQ 312
Query: 202 NQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMH 260
Q+QPS++ L H A+KLV K+++ +G + GG L
Sbjct: 313 QQRQPSWM---------------LKQSHQFADKLVLSKLRALLGGRINFMPCGGAKLDET 357
Query: 261 IDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA 320
I F+ AIG+ V++GYG+TE++ ++ C S+G + ++KI E NE+L
Sbjct: 358 IGRFFHAIGINVKLGYGMTETTATVSCWDDHCFNPDSIGLSMPGAQVKI--GENNEIL-- 413
Query: 321 GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVL 380
VRG VM+GY+K T ++ DE G+L TGD G I + G L +
Sbjct: 414 -------VRGPMVMRGYYKLDKETTESFDEQGFLKTGDAGHIDEN----------GNLFI 456
Query: 381 EGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAK 440
R K+ + S G+ + P +E A + I QI VI ++ A+IVP + + AK
Sbjct: 457 TDRIKELMKTSGGKYIAPQVIEGAIGKDHFIEQIAVIADTRKFVSALIVPCFDSLEEYAK 516
Query: 441 RLSIVHADASELSK--------EKTISLLYGELRKWTSKCSFQIGP 478
L+I + D EL K EK ++ L EL K+ F++ P
Sbjct: 517 ELNIKYHDRLELIKHSQVLEMFEKRVNELQKELAKFEQVKKFRLLP 562
>gi|229521309|ref|ZP_04410729.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae TM 11079-80]
gi|421355168|ref|ZP_15805500.1| AMP-binding enzyme family protein [Vibrio cholerae HE-45]
gi|229341841|gb|EEO06843.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae TM 11079-80]
gi|395954293|gb|EJH64906.1| AMP-binding enzyme family protein [Vibrio cholerae HE-45]
Length = 601
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 138/466 (29%), Positives = 218/466 (46%), Gaps = 63/466 (13%)
Query: 31 IDLGRESRKAFSDSNDARKHYKY--------ETIGSDDIATYVYTSGTTGNPKGVMLTHK 82
IDL + S D A+ H++ E DD+ T +YTSGTTG PKGVML ++
Sbjct: 142 IDLKQASCAMHWDEFVAQSHHQVRAPLDALIEQANYDDLFTLIYTSGTTGTPKGVMLDYR 201
Query: 83 NLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQ 141
N+ Q+ + D L LP HV+ERA ++ +G Y V ++++ L
Sbjct: 202 NIGAQLEGHDQRLNLTQEDVSLCFLPLSHVFERAWTAYVLYKGATNCYLQDVAHVREALA 261
Query: 142 RYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTR 201
+P M +VP YE ++S I +++ + R+V+ F + C +
Sbjct: 262 EVRPTVMCAVPRFYEKIFSAIHEKVAKAPLVRKVL--------FTWAVNMGAKMAVC-RQ 312
Query: 202 NQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMH 260
Q+QPS++ L H A+KLV K+++ +G + GG L
Sbjct: 313 QQRQPSWM---------------LKQSHQFADKLVLSKLRALLGGRINFMPCGGAKLDET 357
Query: 261 IDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA 320
I F+ AIG+ V++GYG+TE++ ++ C S+G + ++KI E NE+L
Sbjct: 358 IGRFFHAIGINVKLGYGMTETTATVSCWDDHCFNPDSIGLSMPGAQVKI--GENNEIL-- 413
Query: 321 GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVL 380
VRG VM+GY+K T ++ DE G+L TGD G I + G L +
Sbjct: 414 -------VRGPMVMRGYYKLDKETAESFDEHGFLKTGDAGHIDEN----------GNLFI 456
Query: 381 EGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAK 440
R K+ + S G+ + P +E A + I QI VI ++ A+IVP + + + AK
Sbjct: 457 TDRIKELMKTSGGKYIAPQVIEGAIGKDHFIEQIAVIADTRKFVSALIVPCFDSLEVYAK 516
Query: 441 RLSIVHADASELSK--------EKTISLLYGELRKWTSKCSFQIGP 478
L+I + D EL K EK ++ L EL K+ F++ P
Sbjct: 517 ELNIKYQDRLELLKHSQVLEMFEKRVNDLQKELAKFEQVKKFRLLP 562
>gi|254226261|ref|ZP_04919854.1| long-chain-fatty-acid--CoA ligase, putative [Vibrio cholerae V51]
gi|125621234|gb|EAZ49575.1| long-chain-fatty-acid--CoA ligase, putative [Vibrio cholerae V51]
Length = 601
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 139/466 (29%), Positives = 218/466 (46%), Gaps = 63/466 (13%)
Query: 31 IDLGRESRKAFSDSNDARKHYK--------YETIGSDDIATYVYTSGTTGNPKGVMLTHK 82
IDL + S D A+ H++ E DD+ T +YTSGTTG PKGVML ++
Sbjct: 142 IDLKQASCAMHWDEFVAQSHHQDRAPLDALIEQANYDDLFTLIYTSGTTGTPKGVMLDYR 201
Query: 83 NLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQ 141
N+ Q+ + D L LP HV+ERA ++ +G Y V ++++ L
Sbjct: 202 NIGAQLEGHDQRLNLTQEDVSLCFLPLSHVFERAWTAYVLYKGATNCYLQDVAHVREALA 261
Query: 142 RYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTR 201
+P M +VP YE ++S I +++ + R+V+ F + C +
Sbjct: 262 EVRPTVMCAVPRFYEKIFSAIHEKVAKAPLVRKVL--------FTWAVNMGAKMAVC-RQ 312
Query: 202 NQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMH 260
Q+QPS++ L H LA+KLV K+++ +G + GG L
Sbjct: 313 QQRQPSWM---------------LKQSHQLADKLVLSKLRALLGGRINFMPCGGAKLDET 357
Query: 261 IDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA 320
I F+ AIG+ V++GYG+TE++ ++ C S+G + ++KI E NE+L
Sbjct: 358 IGRFFHAIGINVKLGYGMTETTATVSCWDDHCFNPDSIGLSMPGAQVKI--GENNEIL-- 413
Query: 321 GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVL 380
VRG VM+GY+K T ++ DE G+L TGD G I + G L +
Sbjct: 414 -------VRGPMVMRGYYKLDKETAESFDEHGFLKTGDAGHIDEN----------GNLFI 456
Query: 381 EGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAK 440
R K+ + S G+ + P +E A + I QI VI ++ A+IVP + + AK
Sbjct: 457 TDRIKELMKTSGGKYIAPQVIEGAIGKDHFIEQIAVIADTRKFVSALIVPCFDSLEEYAK 516
Query: 441 RLSIVHADASELSK--------EKTISLLYGELRKWTSKCSFQIGP 478
L+I + D EL K EK ++ L EL K+ F++ P
Sbjct: 517 ELNIKYHDRLELIKHSQVLEMFEKRVNDLQKELAKFEQVKKFRLLP 562
>gi|417825702|ref|ZP_12472290.1| AMP-binding enzyme family protein [Vibrio cholerae HE48]
gi|340047187|gb|EGR08117.1| AMP-binding enzyme family protein [Vibrio cholerae HE48]
Length = 601
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 138/466 (29%), Positives = 218/466 (46%), Gaps = 63/466 (13%)
Query: 31 IDLGRESRKAFSDSNDARKHYK--------YETIGSDDIATYVYTSGTTGNPKGVMLTHK 82
IDL + S D A+ H++ E DD+ T +YTSGTTG PKGVML ++
Sbjct: 142 IDLKQASCAMHWDEFVAQSHHQDRALLDALIEQANYDDLFTLIYTSGTTGTPKGVMLDYR 201
Query: 83 NLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQ 141
N+ Q+ + D L LP HV+ERA ++ +G Y V ++++ L
Sbjct: 202 NIGAQLEGHDQRLNLTQEDVSLCFLPLSHVFERAWTAYVLYKGATNCYLQDVAHVREALA 261
Query: 142 RYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTR 201
+P M +VP YE ++S I +++ + R+V+ F + C +
Sbjct: 262 EVRPTVMCAVPRFYEKIFSAIHEKVAKAPLVRKVL--------FTWAVNMGAKMAVC-RQ 312
Query: 202 NQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMH 260
Q+QPS++ L H A+KLV K+++ +G + GG L
Sbjct: 313 QQRQPSWM---------------LKQSHQFADKLVLSKLRALLGGRINFMPCGGAKLDET 357
Query: 261 IDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA 320
I F+ AIG+ V++GYG+TE++ ++ C S+G + ++KI E NE+L
Sbjct: 358 IGRFFHAIGINVKLGYGMTETTATVSCWDDHCFNPDSIGLSMPGAQVKI--GENNEIL-- 413
Query: 321 GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVL 380
VRG VM+GY+K T ++ DE G+L TGD G I + G L +
Sbjct: 414 -------VRGPMVMRGYYKLDKETAESFDEHGFLKTGDAGHIDEN----------GNLFI 456
Query: 381 EGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAK 440
R K+ + S G+ + P +E A + I QI VI ++ A+IVP + + + AK
Sbjct: 457 TDRIKELMKTSGGKYIAPQVIEGAIGKDHFIEQIAVIADTRKFVSALIVPCFDSLEVYAK 516
Query: 441 RLSIVHADASELSK--------EKTISLLYGELRKWTSKCSFQIGP 478
L+I + D EL K EK ++ L EL K+ F++ P
Sbjct: 517 ELNIKYQDRLELLKHSQVLEMFEKRVNDLQKELAKFEQVKKFRLLP 562
>gi|153826974|ref|ZP_01979641.1| long-chain-fatty-acid--CoA ligase, putative [Vibrio cholerae MZO-2]
gi|149739172|gb|EDM53454.1| long-chain-fatty-acid--CoA ligase, putative [Vibrio cholerae MZO-2]
Length = 601
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 138/466 (29%), Positives = 218/466 (46%), Gaps = 63/466 (13%)
Query: 31 IDLGRESRKAFSDSNDARKHYKY--------ETIGSDDIATYVYTSGTTGNPKGVMLTHK 82
IDL + S D A+ H++ E DD+ T +YTSGTTG PKGVML ++
Sbjct: 142 IDLKQASCAMHWDEFVAQSHHQVRAPLDALIEQANYDDLFTLIYTSGTTGTPKGVMLDYR 201
Query: 83 NLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQ 141
N+ Q+ + D L LP HV+ERA ++ +G Y V ++++ L
Sbjct: 202 NIGAQLEGHDQRLNLTQEDVSLCFLPLSHVFERAWTAYVLYKGATNCYLQDVAHVREALA 261
Query: 142 RYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTR 201
+P M +VP YE ++S I +++ + R+V+ F + C +
Sbjct: 262 EVRPTVMCAVPRFYEKIFSAIHEKVAKAPLVRKVL--------FTWAVNMGAKMAVC-RQ 312
Query: 202 NQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMH 260
Q+QPS++ L H A+KLV K+++ +G + GG L
Sbjct: 313 QQRQPSWM---------------LKQSHQFADKLVLSKLRALLGGRINFMPCGGAKLDET 357
Query: 261 IDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA 320
I F+ AIG+ V++GYG+TE++ ++ C S+G + ++KI E NE+L
Sbjct: 358 IGRFFHAIGINVKLGYGMTETTATVSCWDDHCFNPDSIGLSMPGAQVKI--GENNEIL-- 413
Query: 321 GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVL 380
VRG VM+GY+K T ++ DE G+L TGD G I + G L +
Sbjct: 414 -------VRGPMVMRGYYKLDKETAESFDEHGFLKTGDAGHIDEN----------GNLFI 456
Query: 381 EGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAK 440
R K+ + S G+ + P +E A + I QI VI ++ A+IVP + + + AK
Sbjct: 457 TDRIKELMKTSGGKYIAPQVIEGAIGKDHFIEQIAVIADTRKFVSALIVPCFDSLEVYAK 516
Query: 441 RLSIVHADASELSK--------EKTISLLYGELRKWTSKCSFQIGP 478
L+I + D EL K EK ++ L EL K+ F++ P
Sbjct: 517 ELNIKYQDRLELLKHSQVLEMFEKRVNDLQKELAKFEQVKKFRLLP 562
>gi|309750679|gb|ADO80663.1| Probable long-chain-fatty-acid--CoA ligase (Long-chain acyl-CoA
synthetase) (LACS) [Haemophilus influenzae R2866]
Length = 607
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 129/409 (31%), Positives = 194/409 (47%), Gaps = 48/409 (11%)
Query: 60 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGY 119
D+ T +YTSGTTG PKGVML + NL HQ+ + + + D LS LP H++ERA
Sbjct: 186 DLFTIIYTSGTTGEPKGVMLDYANLAHQLETHDLSLNVTDQDISLSFLPFSHIFERAWAA 245
Query: 120 FIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 178
+I RG L Y N ++ L +P M +VP YE +Y+ + ++ + R+++
Sbjct: 246 YILHRGAILCYLEDTNQVRSALTEIRPTLMCAVPRFYEKIYAAVLDKVQKAPKLRQIMFH 305
Query: 179 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 238
I + + F L N K +L L LA+KLV
Sbjct: 306 WAISVG---------QKHFDLRANNKAIPFL---------------LKKQFALADKLVLS 341
Query: 239 KIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 297
K++ +G K GG L I LF+ AIG+ +++GYG+TE++ ++ S
Sbjct: 342 KLRQLLGGRIKMMPCGGAKLEPAIGLFFHAIGINIKLGYGMTETTATVSCWHDFQFNPNS 401
Query: 298 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 357
+G + E+KI E NE+L VRG VM+GY+K P T QA EDG+L TG
Sbjct: 402 IGTLMPKAEVKI--GENNEIL---------VRGGMVMKGYYKKPEETAQAFTEDGFLKTG 450
Query: 358 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 417
D G G L + R K+ + S G+ + P +E + I QI +I
Sbjct: 451 DAGEFDEQ----------GNLFITDRIKELMKTSNGKYIAPQYIESKIGKDKFIEQIAII 500
Query: 418 GQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELR 466
++ A+IVP + + AK+L+I + D EL K I ++ ELR
Sbjct: 501 ADAKKYVSALIVPCFDSLEEYAKQLNIKYHDRLELLKNSDILKMF-ELR 548
>gi|121594394|ref|YP_986290.1| AMP-dependent synthetase and ligase [Acidovorax sp. JS42]
gi|120606474|gb|ABM42214.1| AMP-dependent synthetase and ligase [Acidovorax sp. JS42]
Length = 609
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 132/438 (30%), Positives = 209/438 (47%), Gaps = 46/438 (10%)
Query: 57 GSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERA 116
G +D+A VYTSGTTG PKGVML+H N++ ++++ + + D FLS LP H +ER
Sbjct: 183 GPEDLAAIVYTSGTTGKPKGVMLSHANVVADVKAVLERIAPTPQDVFLSFLPLSHTFERT 242
Query: 117 CGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARR 174
GY++ + G ++Y +V L +DL+ +P ++SVP +YE +++ + + + S
Sbjct: 243 GGYYLPMASGSCVVYARSVAQLAEDLKNVRPTVLVSVPRIYERVHAKLIETLSPSP---- 298
Query: 175 VVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEK 234
+++ A ++ FC + P A W R A+ WP L
Sbjct: 299 ------LKMQLFQAAQAVGWKRFCAAQRLPAPQDDGA---GGWMR---ALPWP---LLRA 343
Query: 235 LVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCN 293
LV K + + G + VSGG L I + +G+++ GYG+TE+SPV++ N
Sbjct: 344 LVAKPLLAQFGGRVRVAVSGGAPLSPTIAHCFLGLGLQLVQGYGMTETSPVVSVNTLEDN 403
Query: 294 VLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGW 353
+VG + E++I G ++VRG VM+GY+K P T + + DGW
Sbjct: 404 DPSTVGRALPGVEVRI-----------GENRELQVRGPIVMKGYWKRPEDTARTVSADGW 452
Query: 354 LNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQ 413
L TGD I GR R + GR K+ IV STGE V P +LE A +L Q
Sbjct: 453 LGTGDQAEIV----DGRIR-------ILGRIKEIIVTSTGEKVPPADLELAITADALFEQ 501
Query: 414 IVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSKCS 473
V+G+ + + V EE A +L + D + L+ + K +
Sbjct: 502 AFVVGEQRPFIACVAVVHAEEWRQLAGQLGLDANDPASLAHPSAQRAALARIEKLAAGFP 561
Query: 474 FQIGP--IHVVDEPFTVN 489
P +H+V EP+T+
Sbjct: 562 RYAVPRAVHLVREPWTIE 579
>gi|269960935|ref|ZP_06175305.1| Putative long-chain-fatty-acid--CoA ligase [Vibrio harveyi 1DA3]
gi|269834375|gb|EEZ88464.1| Putative long-chain-fatty-acid--CoA ligase [Vibrio harveyi 1DA3]
Length = 602
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 130/447 (29%), Positives = 211/447 (47%), Gaps = 55/447 (12%)
Query: 42 SDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGD 101
DS + + +D+ T +YTSGTTG PKGVML + N+ Q+ + + D
Sbjct: 161 DDSQQIELTSRLDQAQEEDLLTLIYTSGTTGQPKGVMLDYANISAQLEGHDERLSLTEDD 220
Query: 102 KFLSMLPPWHVYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLYS 160
L LP HV+ERA +++ +G Y ++D L +P M +VP YE ++S
Sbjct: 221 VSLCFLPLSHVFERAWTFYVLYKGATNCYLQDTMQVRDALSEVRPTVMSAVPRFYEKIFS 280
Query: 161 GIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARI 220
I +++ + R+++ + + A + EG ++PS +
Sbjct: 281 AIHEKVSRAPVHRKIMFTWAVNMGAKMAACHQ--EG-------RKPSLM----------- 320
Query: 221 ICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLT 279
L + LA+KLV K+++ +G + GG L I F+ AIG+ V++GYG+T
Sbjct: 321 ----LRKSYALADKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGMT 376
Query: 280 ESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFK 339
E++ ++ C S+G + ++KI E NE+L VRG VM+GY+K
Sbjct: 377 ETTATVSCWDDQCFDPSSIGMAMPGAQVKI--GENNEIL---------VRGPMVMRGYYK 425
Query: 340 NPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPL 399
P T++ DE G+L TGD G+I + G L + R K+ + S G+ + P
Sbjct: 426 MPEETEKTFDEHGFLKTGDAGYIDEN----------GNLFITDRIKELMKTSNGKYIAPQ 475
Query: 400 ELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK----- 454
+E A + I QI VI ++ A+IVP + + AK L+I + D EL K
Sbjct: 476 VVEGAIGKDHFIEQIAVIADTRKFVSALIVPCYDSLEEYAKELNIKYHDRVELIKHHQIV 535
Query: 455 ---EKTISLLYGELRKWTSKCSFQIGP 478
EK ++ L EL K+ F++ P
Sbjct: 536 EMLEKRVNDLQKELAKFEQVKKFKLLP 562
>gi|229527090|ref|ZP_04416485.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae 12129(1)]
gi|229335487|gb|EEO00969.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae 12129(1)]
Length = 601
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 138/466 (29%), Positives = 218/466 (46%), Gaps = 63/466 (13%)
Query: 31 IDLGRESRKAFSDSNDARKHYK--------YETIGSDDIATYVYTSGTTGNPKGVMLTHK 82
IDL + S D A+ H++ E DD+ T +YTSGTTG PKGVML ++
Sbjct: 142 IDLKQASCAMHWDEFVAQSHHQDRAPLDALIEQANYDDLFTLIYTSGTTGTPKGVMLDYR 201
Query: 83 NLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQ 141
N+ Q+ + D L LP HV+ERA ++ +G Y V ++++ L
Sbjct: 202 NIGAQLEGHDQRLNLTQEDVSLCFLPLSHVFERAWTAYVLYKGATNCYLQDVAHVREALA 261
Query: 142 RYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTR 201
+P M +VP YE ++S I +++ + R+V+ F + C +
Sbjct: 262 EVRPTVMCAVPRFYEKIFSAIHEKVAKAPLVRKVL--------FTWAVNMGAKMAVC-RQ 312
Query: 202 NQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMH 260
Q+QPS++ L H A+KLV K+++ +G + GG L
Sbjct: 313 QQRQPSWM---------------LKQSHQFADKLVLSKLRALLGGRINFMPCGGAKLDET 357
Query: 261 IDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA 320
I F+ AIG+ V++GYG+TE++ ++ C S+G + ++KI E NE+L
Sbjct: 358 IGRFFHAIGINVKLGYGMTETTATVSCWDDHCFNPDSIGLSMPGAQVKI--GENNEIL-- 413
Query: 321 GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVL 380
VRG VM+GY+K T ++ DE G+L TGD G I + G L +
Sbjct: 414 -------VRGPMVMRGYYKLDKETAESFDEHGFLKTGDAGHIDEN----------GNLFI 456
Query: 381 EGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAK 440
R K+ + S G+ + P +E A + I QI VI ++ A+IVP + + + AK
Sbjct: 457 TDRIKELMKTSGGKYIAPQVIEGAIGKDHFIEQIAVIADTRKFVSALIVPCFDSLEVYAK 516
Query: 441 RLSIVHADASELSK--------EKTISLLYGELRKWTSKCSFQIGP 478
L+I + D EL K EK ++ L EL K+ F++ P
Sbjct: 517 ELNIKYQDRLELLKHSQVLEMFEKRVNDLQKELAKFEQVKKFRLLP 562
>gi|160891396|ref|ZP_02072399.1| hypothetical protein BACUNI_03846 [Bacteroides uniformis ATCC 8492]
gi|156858803|gb|EDO52234.1| AMP-binding enzyme [Bacteroides uniformis ATCC 8492]
Length = 601
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 131/441 (29%), Positives = 206/441 (46%), Gaps = 56/441 (12%)
Query: 57 GSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSM--LPPWHVYE 114
DD+A +YTSGTTG PKGVML H N R ++DI D+ +SM LP HV+E
Sbjct: 178 SDDDLANILYTSGTTGEPKGVMLHHFNYREAFR-IHDIRLPFMTDQDVSMNFLPLTHVFE 236
Query: 115 RACGYFIFSRGIEL-MYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 173
+A Y RG+++ + ++++ ++ +P M SVP +E +Y+G+Q++I + R
Sbjct: 237 KAWTYLCIHRGVQVCINLRPQDIQTTIKEIRPTLMCSVPRFWEKVYAGVQEKISQETGLR 296
Query: 174 RVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAE 233
+ + I++ + R K P ++ L + E
Sbjct: 297 KAMMLDAIKVGRTH--------NIDYLRQGKTPPMMLHL---------------KYKFYE 333
Query: 234 KLVYKKIQSAIGISKAGV--SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPT 291
K +Y ++ IGI + G ++P I F ++G+ + VGYGLTES+ ++
Sbjct: 334 KTIYALLKKTIGIENGNFFPTAGAAVPDEICEFVHSVGINMVVGYGLTESTATVSCFLNE 393
Query: 292 CNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDED 351
+GSVG + E+KI E NE+L +RG + GY+K P AT A+D D
Sbjct: 394 GYEIGSVGTVMPDVEVKI--GENNEIL---------LRGKTITTGYYKKPEATAAAIDRD 442
Query: 352 GWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLI 411
GW +TGD G++ H L L R KD S G+ + P LE I
Sbjct: 443 GWFHTGDAGYLKDSH-----------LYLTERIKDLFKTSNGKYISPQALETKLAIDRYI 491
Query: 412 RQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSK 471
QI VI +++ A+IVP V AK I +++ EL + I L+ R T +
Sbjct: 492 DQIAVIADERKFVSALIVPVYGFVKDYAKEKGIAYSNMDELLQHPKIQALF-RARIDTLQ 550
Query: 472 CSF----QIGPIHVVDEPFTV 488
F Q+ ++ EPF++
Sbjct: 551 QQFAHYEQVKRFTLLPEPFSM 571
>gi|225352623|ref|ZP_03743646.1| hypothetical protein BIFPSEUDO_04249 [Bifidobacterium
pseudocatenulatum DSM 20438 = JCM 1200]
gi|225156817|gb|EEG70211.1| hypothetical protein BIFPSEUDO_04249 [Bifidobacterium
pseudocatenulatum DSM 20438 = JCM 1200]
Length = 607
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 130/463 (28%), Positives = 225/463 (48%), Gaps = 65/463 (14%)
Query: 45 NDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRS----LYDIVPAENG 100
+D + +++ +DD+AT VYTSG+TG PKG L+H+N + R+ L++IV E+
Sbjct: 168 SDEELEARIDSVHADDLATIVYTSGSTGAPKGAELSHRNFISITRAGSLALHEIV-LEDH 226
Query: 101 DKFLSMLPPWHVYERACGYFIFSR--GIELMYTAVRNLKDDLQRYQPHYMISVPLVYETL 158
+ L LP H + R Y + G+ + L DL+ ++P Y++ VP V+E +
Sbjct: 227 PRLLLFLPLAHCFARFIQYASIASDDGVVGYLPDTKTLLPDLRSFEPTYLLGVPRVFEKV 286
Query: 159 YSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWA 218
Y+ ++ T R ++ + A + R+ + ++P+ A
Sbjct: 287 YNAASRKAGTGWKGR-----LFLKAAEAARDWSRMQQA------GERPT----------A 325
Query: 219 RIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDL--FYEAIGVKVQVGY 276
+ I HL E VY+ ++SA+G V+ GG+ P+ + L F+ IG+ + GY
Sbjct: 326 KQIAQ-----HLSYEASVYRTVRSALGPRIRYVACGGA-PLDVSLAHFFNGIGLPMIQGY 379
Query: 277 GLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQG 336
G+TE++ AA R T NV+G+VG P + ++I D G ++V+G V +G
Sbjct: 380 GMTETAAPFAATRVTDNVIGTVGQPAPGSSVRISD-----------DGELQVKGPNVFRG 428
Query: 337 YFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENV 396
Y P T +A EDGWL TGD+ I G + + GR KD I+ + G+NV
Sbjct: 429 YHNLPEKTAEAFTEDGWLKTGDLASIDDE----------GRITITGRKKDIIITAGGKNV 478
Query: 397 EPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEK 456
P+ +E+ ++ ++ +VV+G ++ GA+I D E + A SI + + L +
Sbjct: 479 SPIPMEQEIVKCPIVEHVVVVGDNRPFIGALITLDPEG--LEAWLPSIGLSADTPLDRVA 536
Query: 457 TISLLYGELRKWTSKCSFQIGPIH------VVDEPFTVNFLCL 493
+ ++ E++K+ K + + V+D FT CL
Sbjct: 537 ATAAVHDEIQKYVDKANATVSRAESVRKFVVLDTQFTQENKCL 579
>gi|393782192|ref|ZP_10370381.1| hypothetical protein HMPREF1071_01249 [Bacteroides salyersiae
CL02T12C01]
gi|392674226|gb|EIY67675.1| hypothetical protein HMPREF1071_01249 [Bacteroides salyersiae
CL02T12C01]
Length = 602
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 131/439 (29%), Positives = 212/439 (48%), Gaps = 56/439 (12%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSM--LPPWHVYERA 116
DD+A +YTSGTTG PKGVML H L R ++DI + DK +SM LP HV+E+A
Sbjct: 180 DDLANILYTSGTTGEPKGVMLHHSCFLEAFR-IHDIRLVDMSDKDVSMNFLPLTHVFEKA 238
Query: 117 CGYFIFSRGIELMYTAVR--NLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARR 174
Y +G+++ +R +++ ++ +P M SVP +E +Y+G+Q++I ++ ++
Sbjct: 239 WSYLCIHKGVQICIN-LRPVDIQMTIKEIRPTLMCSVPRFWEKVYAGVQEKIAETTGIKK 297
Query: 175 VVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEK 234
+ IR+ +I+ L R K P ++ L + EK
Sbjct: 298 ALMLDAIRVG-------KIHNIDYL-RKGKTPPLMLHLKYQFY---------------EK 334
Query: 235 LVYKKIQSAIGISKAGV--SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTC 292
VY ++ IGI + G ++P I F ++G+ + VGYGLTES+ ++ + +
Sbjct: 335 TVYSLLKKTIGIENGNFFPTAGAAVPDEICEFVHSVGINMLVGYGLTESTATVSCFQNSG 394
Query: 293 NVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDG 352
+GSVG + E+KI E NE+L +RG + +GY+K AT +A+D++G
Sbjct: 395 YEIGSVGTVMPDVEVKI--GENNEIL---------LRGKTITKGYYKKAEATAEAIDKEG 443
Query: 353 WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIR 412
W +TGD G++ G L L R KD S G+ + P LE I
Sbjct: 444 WFHTGDAGYLN-----------GDCLYLTERIKDLFKTSNGKYISPQALETKLAIDRYID 492
Query: 413 QIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE-KTISLLYGELRKWTSK 471
QI +I ++ A+IVP V AK I + D EL + K I L + +
Sbjct: 493 QIAIIADQRKFVSALIVPMYGFVKDYAKEKGIEYKDMEELLQHPKIIGLFRARIDTLQQQ 552
Query: 472 CSF--QIGPIHVVDEPFTV 488
+ Q+ ++ EPF++
Sbjct: 553 FAHYEQVKRFTLLPEPFSM 571
>gi|15642480|ref|NP_232113.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae O1 biovar El Tor
str. N16961]
gi|121590764|ref|ZP_01678094.1| long-chain-fatty-acid--CoA ligase, putative [Vibrio cholerae
2740-80]
gi|121729013|ref|ZP_01682015.1| long-chain-fatty-acid--CoA ligase, putative [Vibrio cholerae V52]
gi|147675212|ref|YP_001217984.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae O395]
gi|153819335|ref|ZP_01972002.1| long-chain-fatty-acid--CoA ligase, putative [Vibrio cholerae NCTC
8457]
gi|153822876|ref|ZP_01975543.1| long-chain-fatty-acid--CoA ligase, putative [Vibrio cholerae B33]
gi|227082604|ref|YP_002811155.1| putative long-chain-fatty-acid--CoA ligase [Vibrio cholerae M66-2]
gi|227118925|ref|YP_002820821.1| putative long-chain-fatty-acid--CoA ligase [Vibrio cholerae O395]
gi|229507458|ref|ZP_04396963.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae BX 330286]
gi|229512347|ref|ZP_04401826.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae B33]
gi|229519483|ref|ZP_04408926.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae RC9]
gi|229606963|ref|YP_002877611.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae MJ-1236]
gi|254849608|ref|ZP_05238958.1| long-chain-fatty-acid-CoA ligase [Vibrio cholerae MO10]
gi|255746847|ref|ZP_05420792.1| long-chain-fatty-acid--CoA ligase [Vibrio cholera CIRS 101]
gi|262162012|ref|ZP_06031028.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae INDRE 91/1]
gi|262167313|ref|ZP_06035023.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae RC27]
gi|298500161|ref|ZP_07009966.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
gi|360036356|ref|YP_004938119.1| long-chain acyl-CoA synthetase [Vibrio cholerae O1 str.
2010EL-1786]
gi|379742270|ref|YP_005334239.1| long-chain acyl-CoA synthetase [Vibrio cholerae IEC224]
gi|417814498|ref|ZP_12461151.1| AMP-binding enzyme family protein [Vibrio cholerae HC-49A2]
gi|417818238|ref|ZP_12464866.1| AMP-binding enzyme family protein [Vibrio cholerae HCUF01]
gi|418335481|ref|ZP_12944390.1| AMP-binding enzyme family protein [Vibrio cholerae HC-06A1]
gi|418339446|ref|ZP_12948336.1| AMP-binding enzyme family protein [Vibrio cholerae HC-23A1]
gi|418347017|ref|ZP_12951770.1| AMP-binding enzyme family protein [Vibrio cholerae HC-28A1]
gi|418350773|ref|ZP_12955504.1| AMP-binding enzyme family protein [Vibrio cholerae HC-43A1]
gi|418356029|ref|ZP_12958748.1| AMP-binding enzyme family protein [Vibrio cholerae HC-61A1]
gi|419827426|ref|ZP_14350925.1| AMP-binding enzyme family protein [Vibrio cholerae CP1033(6)]
gi|421317974|ref|ZP_15768542.1| AMP-binding enzyme family protein [Vibrio cholerae CP1032(5)]
gi|421322231|ref|ZP_15772783.1| AMP-binding enzyme family protein [Vibrio cholerae CP1038(11)]
gi|421326029|ref|ZP_15776553.1| AMP-binding enzyme family protein [Vibrio cholerae CP1041(14)]
gi|421329687|ref|ZP_15780197.1| AMP-binding enzyme family protein [Vibrio cholerae CP1042(15)]
gi|421333643|ref|ZP_15784120.1| AMP-binding enzyme family protein [Vibrio cholerae CP1046(19)]
gi|421337185|ref|ZP_15787646.1| AMP-binding enzyme family protein [Vibrio cholerae CP1048(21)]
gi|421340612|ref|ZP_15791044.1| AMP-binding enzyme family protein [Vibrio cholerae HC-20A2]
gi|421348160|ref|ZP_15798537.1| AMP-binding enzyme family protein [Vibrio cholerae HC-46A1]
gi|422897573|ref|ZP_16935012.1| AMP-binding enzyme family protein [Vibrio cholerae HC-40A1]
gi|422903772|ref|ZP_16938736.1| AMP-binding enzyme family protein [Vibrio cholerae HC-48A1]
gi|422907656|ref|ZP_16942449.1| AMP-binding enzyme family protein [Vibrio cholerae HC-70A1]
gi|422914496|ref|ZP_16949000.1| AMP-binding enzyme family protein [Vibrio cholerae HFU-02]
gi|422926700|ref|ZP_16959712.1| AMP-binding enzyme family protein [Vibrio cholerae HC-38A1]
gi|423146023|ref|ZP_17133616.1| AMP-binding enzyme family protein [Vibrio cholerae HC-19A1]
gi|423150699|ref|ZP_17138012.1| AMP-binding enzyme family protein [Vibrio cholerae HC-21A1]
gi|423154533|ref|ZP_17141697.1| AMP-binding enzyme family protein [Vibrio cholerae HC-22A1]
gi|423157601|ref|ZP_17144693.1| AMP-binding enzyme family protein [Vibrio cholerae HC-32A1]
gi|423161173|ref|ZP_17148111.1| AMP-binding enzyme family protein [Vibrio cholerae HC-33A2]
gi|423166002|ref|ZP_17152721.1| AMP-binding enzyme family protein [Vibrio cholerae HC-48B2]
gi|423732032|ref|ZP_17705333.1| AMP-binding enzyme family protein [Vibrio cholerae HC-17A1]
gi|423771758|ref|ZP_17713598.1| AMP-binding enzyme family protein [Vibrio cholerae HC-50A2]
gi|423896810|ref|ZP_17727642.1| AMP-binding enzyme family protein [Vibrio cholerae HC-62A1]
gi|423932013|ref|ZP_17732035.1| AMP-binding enzyme family protein [Vibrio cholerae HC-77A1]
gi|424003448|ref|ZP_17746522.1| AMP-binding enzyme family protein [Vibrio cholerae HC-17A2]
gi|424007242|ref|ZP_17750211.1| AMP-binding enzyme family protein [Vibrio cholerae HC-37A1]
gi|424025222|ref|ZP_17764871.1| AMP-binding enzyme family protein [Vibrio cholerae HC-62B1]
gi|424028108|ref|ZP_17767709.1| AMP-binding enzyme family protein [Vibrio cholerae HC-69A1]
gi|424587389|ref|ZP_18026967.1| AMP-binding enzyme family protein [Vibrio cholerae CP1030(3)]
gi|424596043|ref|ZP_18035361.1| AMP-binding enzyme family protein [Vibrio cholerae CP1040(13)]
gi|424599952|ref|ZP_18039130.1| AMP-binding enzyme family protein [Vibrio Cholerae CP1044(17)]
gi|424602714|ref|ZP_18041853.1| AMP-binding enzyme family protein [Vibrio cholerae CP1047(20)]
gi|424607648|ref|ZP_18046588.1| AMP-binding enzyme family protein [Vibrio cholerae CP1050(23)]
gi|424611464|ref|ZP_18050302.1| AMP-binding enzyme family protein [Vibrio cholerae HC-39A1]
gi|424614292|ref|ZP_18053076.1| AMP-binding enzyme family protein [Vibrio cholerae HC-41A1]
gi|424618259|ref|ZP_18056929.1| AMP-binding enzyme family protein [Vibrio cholerae HC-42A1]
gi|424623045|ref|ZP_18061548.1| AMP-binding enzyme family protein [Vibrio cholerae HC-47A1]
gi|424646005|ref|ZP_18083739.1| AMP-binding enzyme family protein [Vibrio cholerae HC-56A2]
gi|424653772|ref|ZP_18091151.1| AMP-binding enzyme family protein [Vibrio cholerae HC-57A2]
gi|424657593|ref|ZP_18094877.1| AMP-binding enzyme family protein [Vibrio cholerae HC-81A2]
gi|440710708|ref|ZP_20891356.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae 4260B]
gi|443504822|ref|ZP_21071774.1| AMP-binding enzyme family protein [Vibrio cholerae HC-64A1]
gi|443508728|ref|ZP_21075483.1| AMP-binding enzyme family protein [Vibrio cholerae HC-65A1]
gi|443512566|ref|ZP_21079199.1| AMP-binding enzyme family protein [Vibrio cholerae HC-67A1]
gi|443516125|ref|ZP_21082630.1| AMP-binding enzyme family protein [Vibrio cholerae HC-68A1]
gi|443519918|ref|ZP_21086305.1| AMP-binding enzyme family protein [Vibrio cholerae HC-71A1]
gi|443524810|ref|ZP_21091013.1| AMP-binding enzyme family protein [Vibrio cholerae HC-72A2]
gi|443532394|ref|ZP_21098408.1| AMP-binding enzyme family protein [Vibrio cholerae HC-7A1]
gi|443536208|ref|ZP_21102075.1| AMP-binding enzyme family protein [Vibrio cholerae HC-80A1]
gi|443539737|ref|ZP_21105590.1| AMP-binding enzyme family protein [Vibrio cholerae HC-81A1]
gi|449055077|ref|ZP_21733745.1| Long-chain-fatty-acid--CoA ligase [Vibrio cholerae O1 str. Inaba
G4222]
gi|9657064|gb|AAF95626.1| long-chain-fatty-acid--CoA ligase, putative [Vibrio cholerae O1
biovar El Tor str. N16961]
gi|121547405|gb|EAX57518.1| long-chain-fatty-acid--CoA ligase, putative [Vibrio cholerae
2740-80]
gi|121628695|gb|EAX61165.1| long-chain-fatty-acid--CoA ligase, putative [Vibrio cholerae V52]
gi|126510116|gb|EAZ72710.1| long-chain-fatty-acid--CoA ligase, putative [Vibrio cholerae NCTC
8457]
gi|126519613|gb|EAZ76836.1| long-chain-fatty-acid--CoA ligase, putative [Vibrio cholerae B33]
gi|146317095|gb|ABQ21634.1| putative long-chain-fatty-acid--CoA ligase [Vibrio cholerae O395]
gi|227010492|gb|ACP06704.1| putative long-chain-fatty-acid--CoA ligase [Vibrio cholerae M66-2]
gi|227014375|gb|ACP10585.1| putative long-chain-fatty-acid--CoA ligase [Vibrio cholerae O395]
gi|229344172|gb|EEO09147.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae RC9]
gi|229352312|gb|EEO17253.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae B33]
gi|229354963|gb|EEO19884.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae BX 330286]
gi|229369618|gb|ACQ60041.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae MJ-1236]
gi|254845313|gb|EET23727.1| long-chain-fatty-acid-CoA ligase [Vibrio cholerae MO10]
gi|255735249|gb|EET90649.1| long-chain-fatty-acid--CoA ligase [Vibrio cholera CIRS 101]
gi|262024288|gb|EEY42979.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae RC27]
gi|262028261|gb|EEY46918.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae INDRE 91/1]
gi|297540854|gb|EFH76908.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
gi|340035834|gb|EGQ96812.1| AMP-binding enzyme family protein [Vibrio cholerae HCUF01]
gi|340036984|gb|EGQ97960.1| AMP-binding enzyme family protein [Vibrio cholerae HC-49A2]
gi|341619829|gb|EGS45631.1| AMP-binding enzyme family protein [Vibrio cholerae HC-48A1]
gi|341619946|gb|EGS45733.1| AMP-binding enzyme family protein [Vibrio cholerae HC-70A1]
gi|341620751|gb|EGS46517.1| AMP-binding enzyme family protein [Vibrio cholerae HC-40A1]
gi|341636308|gb|EGS61010.1| AMP-binding enzyme family protein [Vibrio cholerae HFU-02]
gi|341645701|gb|EGS69830.1| AMP-binding enzyme family protein [Vibrio cholerae HC-38A1]
gi|356416516|gb|EHH70147.1| AMP-binding enzyme family protein [Vibrio cholerae HC-06A1]
gi|356416913|gb|EHH70534.1| AMP-binding enzyme family protein [Vibrio cholerae HC-21A1]
gi|356422267|gb|EHH75750.1| AMP-binding enzyme family protein [Vibrio cholerae HC-19A1]
gi|356427738|gb|EHH80979.1| AMP-binding enzyme family protein [Vibrio cholerae HC-22A1]
gi|356428406|gb|EHH81633.1| AMP-binding enzyme family protein [Vibrio cholerae HC-23A1]
gi|356429545|gb|EHH82761.1| AMP-binding enzyme family protein [Vibrio cholerae HC-28A1]
gi|356439071|gb|EHH92071.1| AMP-binding enzyme family protein [Vibrio cholerae HC-32A1]
gi|356443666|gb|EHH96485.1| AMP-binding enzyme family protein [Vibrio cholerae HC-33A2]
gi|356445269|gb|EHH98078.1| AMP-binding enzyme family protein [Vibrio cholerae HC-43A1]
gi|356449593|gb|EHI02339.1| AMP-binding enzyme family protein [Vibrio cholerae HC-48B2]
gi|356452527|gb|EHI05206.1| AMP-binding enzyme family protein [Vibrio cholerae HC-61A1]
gi|356647510|gb|AET27565.1| long-chain acyl-CoA synthetase [Vibrio cholerae O1 str.
2010EL-1786]
gi|378795780|gb|AFC59251.1| long-chain acyl-CoA synthetase [Vibrio cholerae IEC224]
gi|395916232|gb|EJH27062.1| AMP-binding enzyme family protein [Vibrio cholerae CP1032(5)]
gi|395917867|gb|EJH28695.1| AMP-binding enzyme family protein [Vibrio cholerae CP1041(14)]
gi|395917971|gb|EJH28798.1| AMP-binding enzyme family protein [Vibrio cholerae CP1038(11)]
gi|395928221|gb|EJH38984.1| AMP-binding enzyme family protein [Vibrio cholerae CP1042(15)]
gi|395929045|gb|EJH39798.1| AMP-binding enzyme family protein [Vibrio cholerae CP1046(19)]
gi|395932284|gb|EJH43028.1| AMP-binding enzyme family protein [Vibrio cholerae CP1048(21)]
gi|395939895|gb|EJH50577.1| AMP-binding enzyme family protein [Vibrio cholerae HC-20A2]
gi|395942739|gb|EJH53415.1| AMP-binding enzyme family protein [Vibrio cholerae HC-46A1]
gi|395957678|gb|EJH68210.1| AMP-binding enzyme family protein [Vibrio cholerae HC-56A2]
gi|395958149|gb|EJH68652.1| AMP-binding enzyme family protein [Vibrio cholerae HC-57A2]
gi|395960785|gb|EJH71145.1| AMP-binding enzyme family protein [Vibrio cholerae HC-42A1]
gi|395970073|gb|EJH79884.1| AMP-binding enzyme family protein [Vibrio cholerae HC-47A1]
gi|395971996|gb|EJH81620.1| AMP-binding enzyme family protein [Vibrio cholerae CP1030(3)]
gi|395974400|gb|EJH83929.1| AMP-binding enzyme family protein [Vibrio cholerae CP1047(20)]
gi|408006131|gb|EKG44307.1| AMP-binding enzyme family protein [Vibrio cholerae HC-39A1]
gi|408010593|gb|EKG48446.1| AMP-binding enzyme family protein [Vibrio cholerae HC-41A1]
gi|408030465|gb|EKG67126.1| AMP-binding enzyme family protein [Vibrio cholerae CP1040(13)]
gi|408040591|gb|EKG76766.1| AMP-binding enzyme family protein [Vibrio Cholerae CP1044(17)]
gi|408041889|gb|EKG77976.1| AMP-binding enzyme family protein [Vibrio cholerae CP1050(23)]
gi|408051829|gb|EKG86905.1| AMP-binding enzyme family protein [Vibrio cholerae HC-81A2]
gi|408608216|gb|EKK81619.1| AMP-binding enzyme family protein [Vibrio cholerae CP1033(6)]
gi|408622477|gb|EKK95461.1| AMP-binding enzyme family protein [Vibrio cholerae HC-17A1]
gi|408632827|gb|EKL05258.1| AMP-binding enzyme family protein [Vibrio cholerae HC-50A2]
gi|408653605|gb|EKL24767.1| AMP-binding enzyme family protein [Vibrio cholerae HC-77A1]
gi|408654098|gb|EKL25241.1| AMP-binding enzyme family protein [Vibrio cholerae HC-62A1]
gi|408844341|gb|EKL84473.1| AMP-binding enzyme family protein [Vibrio cholerae HC-37A1]
gi|408845097|gb|EKL85218.1| AMP-binding enzyme family protein [Vibrio cholerae HC-17A2]
gi|408869573|gb|EKM08869.1| AMP-binding enzyme family protein [Vibrio cholerae HC-62B1]
gi|408878384|gb|EKM17394.1| AMP-binding enzyme family protein [Vibrio cholerae HC-69A1]
gi|439974037|gb|ELP50241.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae 4260B]
gi|443430901|gb|ELS73459.1| AMP-binding enzyme family protein [Vibrio cholerae HC-64A1]
gi|443434731|gb|ELS80883.1| AMP-binding enzyme family protein [Vibrio cholerae HC-65A1]
gi|443438624|gb|ELS88344.1| AMP-binding enzyme family protein [Vibrio cholerae HC-67A1]
gi|443442661|gb|ELS95969.1| AMP-binding enzyme family protein [Vibrio cholerae HC-68A1]
gi|443446442|gb|ELT03107.1| AMP-binding enzyme family protein [Vibrio cholerae HC-71A1]
gi|443449263|gb|ELT09564.1| AMP-binding enzyme family protein [Vibrio cholerae HC-72A2]
gi|443457784|gb|ELT25181.1| AMP-binding enzyme family protein [Vibrio cholerae HC-7A1]
gi|443460711|gb|ELT31795.1| AMP-binding enzyme family protein [Vibrio cholerae HC-80A1]
gi|443464867|gb|ELT39528.1| AMP-binding enzyme family protein [Vibrio cholerae HC-81A1]
gi|448265119|gb|EMB02354.1| Long-chain-fatty-acid--CoA ligase [Vibrio cholerae O1 str. Inaba
G4222]
Length = 601
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 138/466 (29%), Positives = 217/466 (46%), Gaps = 63/466 (13%)
Query: 31 IDLGRESRKAFSDSNDARKHYK--------YETIGSDDIATYVYTSGTTGNPKGVMLTHK 82
IDL + S D A+ H++ E DD+ T +YTSGTTG PKGVML ++
Sbjct: 142 IDLKQASCAMHWDEFVAQSHHQDRAPLDALIEQANYDDLFTLIYTSGTTGTPKGVMLDYR 201
Query: 83 NLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQ 141
N+ Q+ + D L LP HV+ERA ++ +G Y V ++++ L
Sbjct: 202 NIGAQLEGHDQRLNLTQEDVSLCFLPLSHVFERAWTAYVLYKGATNCYLQDVAHVREALA 261
Query: 142 RYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTR 201
+P M +VP YE ++S I +++ + R+V+ F + C +
Sbjct: 262 EVRPTVMCAVPRFYEKIFSAIHEKVVKAPLVRKVL--------FTWAVNMGAKMAVC-RQ 312
Query: 202 NQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMH 260
Q+QPS++ L H A+KLV K+++ +G + GG L
Sbjct: 313 QQRQPSWM---------------LKQSHQFADKLVLSKLRALLGGRINFMPCGGAKLDET 357
Query: 261 IDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA 320
I F+ AIG+ V++GYG+TE++ ++ C S+G + ++KI E NE+L
Sbjct: 358 IGRFFHAIGINVKLGYGMTETTATVSCWDDHCFNPDSIGLSMPGAQVKI--GENNEIL-- 413
Query: 321 GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVL 380
VRG VM+GY+K T ++ DE G+L TGD G I + G L +
Sbjct: 414 -------VRGPMVMRGYYKLDKETTESFDEQGFLKTGDAGHIDEN----------GNLFI 456
Query: 381 EGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAK 440
R K+ + S G+ + P +E A + I QI VI ++ A+IVP + + AK
Sbjct: 457 TDRIKELMKTSGGKYIAPQVIEGAIGKDHFIEQIAVIADTRKFVSALIVPCFDSLEEYAK 516
Query: 441 RLSIVHADASELSK--------EKTISLLYGELRKWTSKCSFQIGP 478
L+I + D EL K EK ++ L EL K+ F++ P
Sbjct: 517 ELNIKYHDRLELIKHSQVLEMFEKRVNELQKELAKFEQVKKFRLLP 562
>gi|407069899|ref|ZP_11100737.1| long-chain-fatty-acid--CoA ligase [Vibrio cyclitrophicus ZF14]
Length = 602
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 128/430 (29%), Positives = 204/430 (47%), Gaps = 55/430 (12%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 118
DD+ T +YTSGTTG PKGVML + N+ +Q++ + + D L LP HV+ERA
Sbjct: 178 DDLLTLIYTSGTTGQPKGVMLDYTNIGYQLKGHDERLSLTKDDVSLCFLPLSHVFERAWT 237
Query: 119 YFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 177
++ +G Y ++D L +P M +VP YE ++S I +++ + R+V+
Sbjct: 238 FYALYKGATNCYLQDTMQVRDALSDVKPTVMCAVPRFYEKIFSAIHEKVSKAPFIRKVLF 297
Query: 178 RALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVY 237
+ + + + EG + PS++ L H LA+KLV
Sbjct: 298 TWAVNMGAKLSVCHQ--EG-------RTPSFM---------------LKKSHALADKLVL 333
Query: 238 KKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLG 296
K+++ +G + + GG L I F+ AIG+ V++GYG+TE++ ++ C
Sbjct: 334 SKLRALLGGNINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTATVSCWDDRCFNPD 393
Query: 297 SVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNT 356
S+G + E+KI G+K + VRG VM+GY+K P T DE G+L T
Sbjct: 394 SIGMSMPGAEVKI-----------GAKDEILVRGPMVMRGYYKMPEETANTFDEHGFLKT 442
Query: 357 GDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVV 416
GD G + G L + R K+ + S G+ + P +E A + I QI V
Sbjct: 443 GDAGHFDEN----------GNLFITDRIKELMKTSGGKYIAPQVVEGAIGKDHFIEQIAV 492
Query: 417 IGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLLYGELRKW 468
I ++ A+IVP + + AK L+I + D EL K EK ++ L EL K+
Sbjct: 493 IADTRKFVSALIVPCYDSLEEYAKELNIKYHDRVELVKHHQIIEMLEKRVNNLQQELAKF 552
Query: 469 TSKCSFQIGP 478
F++ P
Sbjct: 553 EQVKKFKLLP 562
>gi|317478468|ref|ZP_07937628.1| AMP-binding enzyme [Bacteroides sp. 4_1_36]
gi|316905357|gb|EFV27151.1| AMP-binding enzyme [Bacteroides sp. 4_1_36]
Length = 601
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 131/440 (29%), Positives = 205/440 (46%), Gaps = 56/440 (12%)
Query: 58 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSM--LPPWHVYER 115
DD+A +YTSGTTG PKGVML H N R ++DI D+ +SM LP HV+E+
Sbjct: 179 DDDLANILYTSGTTGEPKGVMLHHFNYREAFR-IHDIRLPFMTDQDVSMNFLPLTHVFEK 237
Query: 116 ACGYFIFSRGIEL-MYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARR 174
A Y RG+++ + ++++ ++ +P M SVP +E +Y+G+Q++I + R+
Sbjct: 238 AWTYLCIHRGVQVCINLRPQDIQTTIKEIRPTLMCSVPRFWEKVYAGVQEKISQETGLRK 297
Query: 175 VVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEK 234
+ I++ + R K P ++ L + EK
Sbjct: 298 AMMLDAIKVGRTH--------NIDYLRQGKTPPMMLHL---------------KYKFYEK 334
Query: 235 LVYKKIQSAIGISKAGV--SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTC 292
+Y ++ IGI + G ++P I F ++G+ + VGYGLTES+ ++
Sbjct: 335 TIYALLKKTIGIENGNFFPTAGAAVPDEICEFVHSVGINMVVGYGLTESTATVSCFLNEG 394
Query: 293 NVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDG 352
+GSVG + E+KI E NE+L +RG + GY+K P AT A+D DG
Sbjct: 395 YEIGSVGTVMPDVEVKI--GENNEIL---------LRGKTITTGYYKKPEATAAAIDRDG 443
Query: 353 WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIR 412
W +TGD G++ H L L R KD S G+ + P LE I
Sbjct: 444 WFHTGDAGYLKDSH-----------LYLTERIKDLFKTSNGKYISPQALETKLAIDRYID 492
Query: 413 QIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSKC 472
QI VI +++ A+IVP V AK I + + EL + I L+ R T +
Sbjct: 493 QIAVIADERKFVSALIVPVYGFVKDYAKEKGIAYNNMDELLQHSKIQALF-RARIDTLQQ 551
Query: 473 SF----QIGPIHVVDEPFTV 488
F Q+ ++ EPF++
Sbjct: 552 QFAHYEQVKRFTLLTEPFSM 571
>gi|444432653|ref|ZP_21227805.1| long-chain fatty-acid--CoA ligase [Gordonia soli NBRC 108243]
gi|443886574|dbj|GAC69526.1| long-chain fatty-acid--CoA ligase [Gordonia soli NBRC 108243]
Length = 601
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 123/416 (29%), Positives = 194/416 (46%), Gaps = 66/416 (15%)
Query: 26 SYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLL 85
+ DE+I G +D +D + + + D AT +YTSGTTG PKG MLTH NLL
Sbjct: 155 AVDELIAAG-------ADIHDDEVAKRRTALSAADPATLIYTSGTTGRPKGCMLTHANLL 207
Query: 86 HQIRSLYD------IVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKD 138
+I ++ + + P G + L LP HV RA G+E+ +T+ + NL
Sbjct: 208 SEIYAVLEGNLSTLLAP---GRRMLMFLPMAHVLARAITLVAIEAGVEVGFTSDIPNLVP 264
Query: 139 DLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFC 198
+ ++P ++SVP V+E +++ +++ R A A + ++ G
Sbjct: 265 EFAVFKPSLILSVPRVFEKVFASARQKAHDDGKGRIFDAAATTAVEYSEALGTDSGPGIV 324
Query: 199 LTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSL 257
L H L + LVY K+++A+G + +SGG L
Sbjct: 325 LRAK--------------------------HRLFDALVYGKLRAALGGDCELAISGGAPL 358
Query: 258 PMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEV 317
+ F+ IG+ V GYGLTE++ A P + +G+VG P+ +++
Sbjct: 359 GARLGHFFRGIGIPVYEGYGLTETTAAFAVNTPGEHKVGTVGKPLAGNSVRL-------- 410
Query: 318 LPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGV 377
G G V + G V GY++NP AT AL EDGW +TGD+G I G
Sbjct: 411 ---GEDGEVLLSGGVVFDGYWQNPEATASAL-EDGWFHTGDLGRIDDE----------GF 456
Query: 378 LVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 433
+ + GR K+ IV + G+NV P LE+ + L+ Q +V+G +Q GA++ D E
Sbjct: 457 ITITGRKKELIVTAGGKNVSPAGLEDVIRANPLVSQALVVGDNQPFIGALVTIDPE 512
>gi|426405050|ref|YP_007024021.1| long-chain fatty acid CoA ligase (AMP-binding) [Bdellovibrio
bacteriovorus str. Tiberius]
gi|425861718|gb|AFY02754.1| long-chain fatty-acid-CoA ligase [Bdellovibrio bacteriovorus str.
Tiberius]
Length = 593
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 128/425 (30%), Positives = 205/425 (48%), Gaps = 52/425 (12%)
Query: 55 TIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYE 114
++ +DIAT +YTSGTTG PKGV++TH + ++ + + A D LS LP H+
Sbjct: 173 SLTQEDIATILYTSGTTGRPKGVVMTHLQAISEVSEAFPLCGATEADTSLSFLPYAHILG 232
Query: 115 RACGYFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 173
R + G L + ++ ++ +L +P +++SVP ++E +Y+ + QI T
Sbjct: 233 RIEHWGHAYIGFTLAFAESLEKMRGNLTEVRPTFLMSVPRIFEKIYAAVTAQIQTQPLKM 292
Query: 174 RVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAE 233
++ + L K Y ++ +++ L + LA+
Sbjct: 293 KIF-------------------NWALEVGTKVGDYKMS------GQVLPLDLLVKYELAK 327
Query: 234 KLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTC 292
KLV KI +A G + +SGG +P I LF+ A GV + GYGLTE++ I P
Sbjct: 328 KLVLDKIPTAFGGRLRFAISGGAPIPREIALFFHAAGVLILEGYGLTETTAAITVNTPFN 387
Query: 293 NVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDG 352
GSVG PI ++KI AE E++ V+ +VM+ Y+KNP ATK+A DG
Sbjct: 388 YKFGSVGRPIGEVKLKI--AEDGEIM---------VKSDKVMKEYYKNPEATKEAFT-DG 435
Query: 353 WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIR 412
W +TGDIG I P GG L + R KD I + G+ V P LE S I
Sbjct: 436 WFHTGDIGEILP----------GGDLKITDRKKDLIKTAGGKYVAPQRLEGLLSLSPYIA 485
Query: 413 QIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSKC 472
++V G ++ A++ D+ V AK I ++D + L + ++ L +RK ++
Sbjct: 486 NVLVHGDQKKYIVALVTLDRPTVENLAKEKQINYSDWNSLVQSPFVAEL---IRKAVAET 542
Query: 473 SFQIG 477
+ Q+
Sbjct: 543 NTQLA 547
>gi|365540244|ref|ZP_09365419.1| Long-chain-fatty-acid--CoA ligase [Vibrio ordalii ATCC 33509]
Length = 602
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 132/447 (29%), Positives = 209/447 (46%), Gaps = 55/447 (12%)
Query: 42 SDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGD 101
+D A + E DD+ T +YTSGTTG PKGVML ++N+ Q+ + + + D
Sbjct: 161 TDGQQAELESRLEQANIDDLLTLIYTSGTTGQPKGVMLDYRNIGAQLEGHDERLNITSDD 220
Query: 102 KFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLYS 160
L LP HV+ERA ++I G Y ++D L +P M +VP YE ++S
Sbjct: 221 VSLCFLPLSHVFERAWTFYILYCGATNCYLQDTMQVRDALSDLKPTVMCAVPRFYEKIFS 280
Query: 161 GIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARI 220
I +++ + R+V+ F + C + +QPS++
Sbjct: 281 AIHEKVSKAPLHRKVL--------FTWAVNMGAKMALC-HQETRQPSFM----------- 320
Query: 221 ICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLT 279
L + LA+K+V K+++ +G + GG L I F+ AIG+ V++GYG+T
Sbjct: 321 ----LKKSYALADKIVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGMT 376
Query: 280 ESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFK 339
E++ ++ C S+G + ++KI D NE+L VRG VM+GY+K
Sbjct: 377 ETTATVSCWDDRCFNPDSIGMSMPGAQVKIGD--NNEIL---------VRGPMVMRGYYK 425
Query: 340 NPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPL 399
T A DE G+L TGD G I G + + R K+ + S G+ + P
Sbjct: 426 MAEETALAFDEQGFLKTGDAGHIDEQ----------GNVFITDRIKELMKTSGGKYIAPQ 475
Query: 400 ELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK----- 454
+E A + I QI VI ++ A+IVP + + + AK L+I + D EL K
Sbjct: 476 VIEGAIGKDHFIEQIAVIADTRKFVSALIVPCYDSLEVYAKELNIKYHDRLELIKNNQVV 535
Query: 455 ---EKTISLLYGELRKWTSKCSFQIGP 478
EK ++ L EL K+ F++ P
Sbjct: 536 EMLEKRVNDLQKELAKFEQVKKFKLLP 562
>gi|153949544|ref|YP_001402359.1| AMP binding protein [Yersinia pseudotuberculosis IP 31758]
gi|170025747|ref|YP_001722252.1| AMP-dependent synthetase and ligase [Yersinia pseudotuberculosis
YPIII]
gi|152961039|gb|ABS48500.1| AMP binding protein [Yersinia pseudotuberculosis IP 31758]
gi|169752281|gb|ACA69799.1| AMP-dependent synthetase and ligase [Yersinia pseudotuberculosis
YPIII]
Length = 601
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 121/424 (28%), Positives = 207/424 (48%), Gaps = 51/424 (12%)
Query: 52 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWH 111
+ E DD+ T +YTSGTTG PKGVML ++N+ Q+ + D LS LP H
Sbjct: 175 RIEACDLDDLFTLIYTSGTTGEPKGVMLDYRNMAAQLYLHDQRLTLTPQDVSLSFLPLSH 234
Query: 112 VYERACGYFIFSRGIELMYTAVRN---LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFT 168
V+ERA +++ G + +Y +RN ++ +Q +P M +VP YE ++S I ++
Sbjct: 235 VFERAWSFYVMHTGAQNVY--IRNTDWVRSAMQAVKPTVMCAVPRFYEKVFSAINDKVAL 292
Query: 169 SSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPL 228
+ +RV+ + FKR+ +G +P + WL + +
Sbjct: 293 AKWHQRVLFHWAV--GCGERKFKRLQQG--------RP------LPWLSEQ--------M 328
Query: 229 HLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAA 287
+ LA++LV +K++ +G + + G L +I LF++AIGV ++ GYG+TE+ ++
Sbjct: 329 YTLADRLVLRKLRGVLGGRVRFLPAAGARLDDNIILFFQAIGVNIKYGYGMTETCATVSC 388
Query: 288 RRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQA 347
GS+G P+ ++++ G++ ++VRG VM+GYFK P T +A
Sbjct: 389 WEEQNFRFGSIGKPLPGIDVRL-----------GAENEIQVRGPIVMRGYFKKPQETLEA 437
Query: 348 LDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALR 407
EDGWL TGD G + G L + R KD + S G+ + P +E +
Sbjct: 438 FTEDGWLKTGDAGALDAQ----------GHLFITERLKDLMKTSGGKYIAPQMIEGTLGQ 487
Query: 408 SSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRK 467
I Q+ +I ++ A+IVP E + A+ +++ + D EL + I ++ + K
Sbjct: 488 DRFIEQVAIIADTRKFVSALIVPSFESLEEYARSINLKYHDRLELLRHSHIVNMFEQRLK 547
Query: 468 WTSK 471
K
Sbjct: 548 EIQK 551
>gi|296282950|ref|ZP_06860948.1| putative long-chain-fatty-acid--CoA ligase (long-chain acyl-CoA
synthetase) [Citromicrobium bathyomarinum JL354]
Length = 603
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 146/453 (32%), Positives = 212/453 (46%), Gaps = 80/453 (17%)
Query: 56 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAE----NGDKFLSMLPPWH 111
IG D A +YTSGT G P+GV+ H +L + DI+ + N ++FLS LP H
Sbjct: 181 IGRRDTACIIYTSGTGGAPRGVLQHHGAILCNVAGAADILIDDFDLSNDERFLSFLPLSH 240
Query: 112 VYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIF-T 168
YE G F+ G ++ Y + L +++ P M+ VP ++E L + I KQI
Sbjct: 241 AYEHTGGQFLPIGVGAQIFYAEGLEKLASNIEETSPTVMVVVPRLFEVLRTRIMKQIAKQ 300
Query: 169 SSAARRVVARAL-IRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWP 227
AA ++ RAL I A KR+ + P
Sbjct: 301 GGAASFLLDRALEIEERAAKKGKKRLRDK------------------------------P 330
Query: 228 LHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIA 286
+ L KL+ KI+ G KA VSGG L + +F++A+G+ + GYG TE+ PVI+
Sbjct: 331 MDALVGKLLRPKIRQKFGGRIKAMVSGGAPLNPDVGIFFQALGLPMMQGYGQTEAGPVIS 390
Query: 287 ARRPTCNV-LGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATK 345
RP V + +VG P+ E+KI AE E+L RG VM GY++N T
Sbjct: 391 CNRPAAGVSMDTVGPPMKGVEVKI--AEDGEIL---------CRGELVMHGYWQNQGETD 439
Query: 346 QALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAA 405
+AL +DGWL+TGDIG + RGR +V+ R KD IV G+NV P +LE
Sbjct: 440 RAL-KDGWLHTGDIGHL---DERGR-------IVITDRKKDMIVNDKGDNVAPQKLEGML 488
Query: 406 LRSSLIRQIVVIGQDQRRP--GAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISL--L 461
I Q +V+G RRP +IVPD E L ++ L +K + L
Sbjct: 489 TLQPEIGQAMVVG--DRRPYVVGLIVPDTEWA------LDWCNSQNKSLDCKKVLELPEF 540
Query: 462 YGELRKWTSKCSFQIGPIHVV------DEPFTV 488
E+RK + + ++ + V DEPF++
Sbjct: 541 RAEIRKAIDRVNAELSVVEKVRGFAFADEPFSI 573
>gi|319896424|ref|YP_004134617.1| long-chain-fatty-acid--CoA ligase [Haemophilus influenzae F3031]
gi|317431926|emb|CBY80272.1| putative long-chain-fatty-acid--CoA ligase [Haemophilus influenzae
F3031]
Length = 599
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 126/407 (30%), Positives = 192/407 (47%), Gaps = 47/407 (11%)
Query: 60 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGY 119
D+ T +YTSGTTG PKGVML + NL HQ+ + + + D LS LP H++ERA
Sbjct: 178 DLFTIIYTSGTTGKPKGVMLDYANLAHQLETHDLSLNVTDQDISLSFLPFSHIFERAWAA 237
Query: 120 FIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 178
+I RG L Y N ++ L +P M +VP YE +Y+ + ++ + R+++
Sbjct: 238 YILHRGAILCYLEDTNQVRSALTEIRPTLMCAVPRFYEKIYAAVLDKVQKAPKLRQIMFH 297
Query: 179 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 238
I + + F L N K +L L LA+KLV
Sbjct: 298 WAISVG---------QKHFDLRANNKAIPFL---------------LKKQFALADKLVLS 333
Query: 239 KIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 297
K++ +G K GG L I LF+ AIG+ +++GYG+TE++ ++ S
Sbjct: 334 KLRQLLGGRIKMMPCGGAKLEPAIGLFFHAIGINIKLGYGMTETTATVSCWHDFQFNPNS 393
Query: 298 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 357
+G + E+KI E NE+L VRG VM+GY+K P T QA EDG+L TG
Sbjct: 394 IGTLMPKAEVKI--GENNEIL---------VRGGMVMKGYYKKPEETAQAFTEDGFLKTG 442
Query: 358 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 417
D G G L + R K+ + S G+ + P +E + I QI +I
Sbjct: 443 DAGEFDEQ----------GNLFITDRIKELMKTSNGKYIAPQYIESKIGKDKFIEQIAII 492
Query: 418 GQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGE 464
++ A+IVP + + AK+L+I + D EL K I ++ +
Sbjct: 493 ADAKKYVSALIVPCFDSLEEYAKQLNIKYHDRLELLKNSDILKMFEQ 539
>gi|153802845|ref|ZP_01957431.1| long-chain-fatty-acid--CoA ligase, putative [Vibrio cholerae MZO-3]
gi|424592182|ref|ZP_18031606.1| AMP-binding enzyme family protein [Vibrio cholerae CP1037(10)]
gi|124121634|gb|EAY40377.1| long-chain-fatty-acid--CoA ligase, putative [Vibrio cholerae MZO-3]
gi|408029778|gb|EKG66480.1| AMP-binding enzyme family protein [Vibrio cholerae CP1037(10)]
Length = 601
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 138/466 (29%), Positives = 217/466 (46%), Gaps = 63/466 (13%)
Query: 31 IDLGRESRKAFSDSNDARKHYK--------YETIGSDDIATYVYTSGTTGNPKGVMLTHK 82
IDL + S D A+ H++ E DD+ T +YTSGTTG PKGVML ++
Sbjct: 142 IDLKQASCAMHWDEFVAQSHHQDRAPLDALIEQANYDDLFTLIYTSGTTGTPKGVMLDYR 201
Query: 83 NLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQ 141
N+ Q+ + D L LP HV+ERA ++ +G Y V ++++ L
Sbjct: 202 NIGAQLEGHDQRLNLTQEDVSLCFLPLSHVFERAWTAYVLYKGATNCYLQDVAHVREALA 261
Query: 142 RYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTR 201
+P M +VP YE ++S I +++ + R+V+ F + C +
Sbjct: 262 EVRPTVMCAVPRFYEKIFSAIHEKVAKAPLVRKVL--------FTWAVNMGAKMAVC-RQ 312
Query: 202 NQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMH 260
Q+QPS++ L H A+KLV K+++ +G + GG L
Sbjct: 313 QQRQPSWM---------------LKQSHQFADKLVLSKLRALLGGRINFMPCGGAKLDET 357
Query: 261 IDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA 320
I F+ AIG+ V++GYG+TE++ ++ C S+G + ++KI E NE+L
Sbjct: 358 IGRFFHAIGINVKLGYGMTETTATVSCWDDHCFNPDSIGLSMPGAQVKI--GENNEIL-- 413
Query: 321 GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVL 380
VRG VM+GY+K T ++ DE G+L TGD G I + G L +
Sbjct: 414 -------VRGPMVMRGYYKLDKETTESFDEQGFLKTGDAGHIDEN----------GNLFI 456
Query: 381 EGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAK 440
R K+ + S G+ + P +E A + I QI VI ++ A+IVP + + AK
Sbjct: 457 TDRIKELMKTSGGKYIAPQVIEGAIGKDHFIEQIAVIADTRKFVSALIVPCFDSLEEYAK 516
Query: 441 RLSIVHADASELSK--------EKTISLLYGELRKWTSKCSFQIGP 478
L+I + D EL K EK ++ L EL K+ F++ P
Sbjct: 517 ELNIKYHDRLELIKHSQVLEMFEKRVNELQKELAKFEQVKKFRLLP 562
>gi|145630709|ref|ZP_01786488.1| long chain fatty acid CoA ligase [Haemophilus influenzae R3021]
gi|144983835|gb|EDJ91285.1| long chain fatty acid CoA ligase [Haemophilus influenzae R3021]
Length = 599
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 126/405 (31%), Positives = 191/405 (47%), Gaps = 47/405 (11%)
Query: 60 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGY 119
D+ T +YTSGTTG PKGVML + NL HQ+ + + + D LS LP H++ERA
Sbjct: 178 DLFTIIYTSGTTGEPKGVMLDYANLAHQLETHDLSLNVTDQDISLSFLPFSHIFERAWAA 237
Query: 120 FIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 178
+I RG L Y N ++ L +P M +VP YE +Y+ + ++ + R+++
Sbjct: 238 YILHRGAILCYLEDTNQVRSALTEIRPTLMCAVPRFYEKIYAAVLDKVQKAPKLRQIMFH 297
Query: 179 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 238
I + + F L N K +L L LA+KLV
Sbjct: 298 WAISVG---------QKHFDLRANNKAIPFL---------------LKKQFALADKLVLS 333
Query: 239 KIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 297
K++ +G K GG L I LF+ AIG+ +++GYG+TE++ ++ S
Sbjct: 334 KLRQLLGGRIKMMPCGGAKLEPAIGLFFHAIGINIKLGYGMTETTATVSCWHDFQFNPNS 393
Query: 298 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 357
+G + E+KI E NE+L VRG VM+GY+K P T QA EDG+L TG
Sbjct: 394 IGTLMPKAEVKI--GENNEIL---------VRGGMVMKGYYKKPEETAQAFTEDGFLKTG 442
Query: 358 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 417
D G G L + R K+ + S G+ + P +E + I QI +I
Sbjct: 443 DAGEFDEQ----------GNLFITDRIKELMKTSNGKYIAPQYIESKIGKDKFIEQIAII 492
Query: 418 GQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLY 462
++ A+IVP + + AK+L+I + D EL K I ++
Sbjct: 493 ADAKKYVSALIVPCFDSLEEYAKQLNIKYHDRLELLKNSDILKMF 537
>gi|213963544|ref|ZP_03391797.1| long-chain-fatty-acid--CoA ligase homolog [Capnocytophaga sputigena
Capno]
gi|213953824|gb|EEB65153.1| long-chain-fatty-acid--CoA ligase homolog [Capnocytophaga sputigena
Capno]
Length = 599
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 129/414 (31%), Positives = 211/414 (50%), Gaps = 49/414 (11%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQ-IRSLYDIVPAENGDKFLSMLPPWHVYERAC 117
DD+ T +YTSGTTG PKGVML+++NL Q I + +N D L+ LP HV+ERA
Sbjct: 180 DDLFTIIYTSGTTGEPKGVMLSYENLAFQMIGHTERLSTVDNTDISLAFLPLSHVFERAW 239
Query: 118 GYFIFSRGIELMYTAVRNL-KDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 176
+F + + + Y NL ++ L + +P M +VP YE +++ + + SS V
Sbjct: 240 TFFCLYKAVTVYYLDDTNLVREALAQVRPTLMCAVPRFYEKIFATVHDKADASS----FV 295
Query: 177 ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLV 236
R L R++ A +R+ L K+PS L + L +KLV
Sbjct: 296 KRKLFRLAIA--TGRRV---LNLREQGKKPSL---------------ALQKAYNLFDKLV 335
Query: 237 YKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVL 295
YKK++ A+G K GG +L I F+++IG+ +++GYG+TE+ I+
Sbjct: 336 YKKLKEALGGRIKFMPCGGANLEPSIGRFFQSIGINLKLGYGMTETVATISCWGDNRINP 395
Query: 296 GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLN 355
SVG + + +++I E NE+L V+G VM+GY+KNP T + DG+L
Sbjct: 396 QSVGEVMPNVQVRI--GEDNEIL---------VKGGMVMKGYYKNPEETAKVFTPDGYLR 444
Query: 356 TGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIV 415
TGD G + ++S L + R K+ + S G+ + P +E + +LI QI
Sbjct: 445 TGDAGKLDGNNS----------LFITERIKELMKTSNGKYIAPQMIEGKVGKYNLIEQIA 494
Query: 416 VIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE-KTISLLYGELRKW 468
V+ ++ A+IVP+ E + A K L+I + + ++L K + I + +L+K+
Sbjct: 495 VVADGKKFVSALIVPNFEMLSQALKDLNIKYKNTADLIKHSQVIEYIGKQLQKF 548
>gi|397645912|gb|EJK77039.1| hypothetical protein THAOC_01158 [Thalassiosira oceanica]
Length = 695
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 135/456 (29%), Positives = 220/456 (48%), Gaps = 74/456 (16%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIV--PAE---NGDKFLSMLPPWHVY 113
+D+A +YTSGTTG PKGV LTH N + + ++ + P + + D+ L+ LP H Y
Sbjct: 245 EDLAGLIYTSGTTGKPKGVELTHDNFVSNVYAVRGMADDPRDFIRSSDRSLAFLPWAHSY 304
Query: 114 ERAC---------GYFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQK 164
+ C G RG+ L+ +DL +P + +VP +Y+ +Y G+Q
Sbjct: 305 GQTCELWCAISHGGSMGVCRGVPLIL-------EDLALVKPTVLFAVPTLYKKVYDGVQN 357
Query: 165 QIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAI 224
I +SS ++ + RA + L R +K+ + L++ L R++
Sbjct: 358 LIGSSSPTKQKLMRAALD----------------LGRKKKESGGSLGLVEGLKHRVL--- 398
Query: 225 LWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSP 283
+ LV KI+ G + + G G + P I F + IG+ + GYGLTE+SP
Sbjct: 399 --------DGLVTSKIRDRFGGNLRHGFVAGAACPKEILDFMDDIGITICEGYGLTETSP 450
Query: 284 VIAARRP--TCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNP 341
+IA P LG VG P++ E+ I+D +TN+ +P+G +G + G VM+GY++NP
Sbjct: 451 IIAINAPYEGKRKLGHVGKPVDGVEVVIIDPDTNQEVPSGQEGEICCYGRNVMRGYYRNP 510
Query: 342 SATKQALD--EDG---WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENV 396
AT + + DG +TGD+G ++ G + + GR K+ L G+ V
Sbjct: 511 EATAEVISVAPDGKSRLFHTGDMGNLSED----------GFVAVTGRLKEQYKLENGKYV 560
Query: 397 EPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASE---LS 453
P +EE+ S I Q VV G ++ A+IVPD +A + + DASE ++
Sbjct: 561 VPTPIEESITMSRFIAQTVVCGANREHNVALIVPD----WVAIRSTLNIADDASEDDLVN 616
Query: 454 KEKTISLLYGELRKWTSKC-SFQIGPIHVVDEPFTV 488
+ L+ E+R T K +++ + PFTV
Sbjct: 617 NPEVRGLMDEEIRVNTYKLKKYEVPQMWAFVAPFTV 652
>gi|229845424|ref|ZP_04465554.1| long chain fatty acid CoA ligase [Haemophilus influenzae 6P18H1]
gi|229811620|gb|EEP47319.1| long chain fatty acid CoA ligase [Haemophilus influenzae 6P18H1]
Length = 599
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 127/407 (31%), Positives = 192/407 (47%), Gaps = 47/407 (11%)
Query: 60 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGY 119
D+ T +YTSGTTG PKGVML + NL HQ+ + + + D LS LP H++ERA
Sbjct: 178 DLFTIIYTSGTTGEPKGVMLDYANLAHQLETHDLSLNVTDQDISLSFLPFSHIFERAWAA 237
Query: 120 FIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 178
+I RG L Y N ++ L +P M +VP YE +Y+ + ++ + R+++
Sbjct: 238 YILHRGAILCYLEDTNQVRSALTEIRPTLMCAVPRFYEKIYAAVLDKVQKAPKLRQIM-- 295
Query: 179 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 238
Y A + F L N K +L L LA+KLV
Sbjct: 296 -------FYWAISVGQKHFDLRANNKTVPFL---------------LKKQFALADKLVLS 333
Query: 239 KIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 297
K++ +G K GG L I LF+ AIG+ +++GYG+TE++ ++ S
Sbjct: 334 KLRQLLGGRIKMMPCGGAKLEPAIGLFFHAIGINIKLGYGMTETTATVSCWHDFQFNPNS 393
Query: 298 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 357
+G + E+KI E NE+L VRG VM+GY+K P T QA EDG+L TG
Sbjct: 394 IGTLMPKAEVKI--GENNEIL---------VRGGMVMKGYYKKPEETAQAFTEDGFLKTG 442
Query: 358 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 417
D G G L + R K+ + S G+ + P +E + I QI +I
Sbjct: 443 DAGEFDEQ----------GNLFITDRIKELMKTSNGKYIAPQYIESKIGKDKFIEQIAII 492
Query: 418 GQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGE 464
++ A+IVP + + AK+L+I + D EL K I ++ +
Sbjct: 493 ADAKKYVSALIVPCFDSLEEYAKQLNIKYHDRLELLKNSDILKMFEQ 539
>gi|226360993|ref|YP_002778771.1| long-chain fatty-acid--CoA ligase [Rhodococcus opacus B4]
gi|226239478|dbj|BAH49826.1| long-chain fatty-acid--CoA ligase [Rhodococcus opacus B4]
Length = 599
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 122/400 (30%), Positives = 198/400 (49%), Gaps = 62/400 (15%)
Query: 45 NDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLY-----DIVPAEN 99
+D+ + + ++D+A+ VYTSGTTG PKG +LTH+N L ++RSL D+ A
Sbjct: 163 DDSEVFKRVVALTANDLASLVYTSGTTGRPKGCILTHRNFLSEVRSLLAAPIGDV--ARP 220
Query: 100 GDKFLSMLPPWHVYERACGYFIFSRG-IELMYTAVRNLKDDLQRYQPHYMISVPLVYETL 158
G++ L+ LP HV RA +F G + ++ + + R++P+ ++ VP V+E +
Sbjct: 221 GNRVLTFLPLAHVLARAVSLAMFEGGATQAHWSDFGTVTGEFARFRPNTILGVPRVFEKV 280
Query: 159 YSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIY---EGFCLTRNQKQPSYLVALIDW 215
G AAR+ + ++ KRI+ E + ++ Q + L
Sbjct: 281 RDG---------AARKAASGGGLQ--------KRIFDFAEATAVAYSEAQDTGGAPLR-- 321
Query: 216 LWARIICAILWPLHLLAEKLVYKKIQSAIGISKA-GVSGGGSLPMHIDLFYEAIGVKVQV 274
L H LA++LVY K+++A+G +SGGG+L + F+ IGV V
Sbjct: 322 ---------LRLEHALADRLVYAKLRAALGGDCWWAISGGGALMPRLGHFFRGIGVPVYE 372
Query: 275 GYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVM 334
GYGLTES+ P +G+VG P+ ++I + G +++RG V
Sbjct: 373 GYGLTESTAAHCVNVPGAQQIGTVGRPLGGNSVRIAE-----------DGEIELRGGVVF 421
Query: 335 QGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGE 394
GY++N AT++ LD DGW TGD+G + G L + GR KD ++ + G+
Sbjct: 422 GGYWRNEHATREVLD-DGWFRTGDLGDLDES----------GYLTITGRKKDLLITAGGK 470
Query: 395 NVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEE 434
NV P LE+ L+ Q VV+G + GA++ D +E
Sbjct: 471 NVSPGPLEDRLRSHPLVSQAVVVGDARPFIGALLTVDPQE 510
>gi|260582084|ref|ZP_05849879.1| long-chain acyl-CoA synthetase [Haemophilus influenzae NT127]
gi|260094974|gb|EEW78867.1| long-chain acyl-CoA synthetase [Haemophilus influenzae NT127]
Length = 599
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 126/407 (30%), Positives = 192/407 (47%), Gaps = 47/407 (11%)
Query: 60 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGY 119
D+ T +YTSGTTG PKGVML + NL HQ+ + + + D LS LP H++ERA
Sbjct: 178 DLFTIIYTSGTTGEPKGVMLDYANLAHQLETHDLSLNVTDQDISLSFLPFSHIFERAWAA 237
Query: 120 FIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 178
+I RG L Y N ++ L +P M +VP YE +Y+ + ++ + R+++
Sbjct: 238 YILHRGAILCYLEDTNQVRSALTEIRPTLMCAVPRFYEKIYAAVLDKVQKAPKLRQIMFH 297
Query: 179 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 238
I + + F L N K +L L LA+KLV
Sbjct: 298 WAISVG---------QKHFDLRANNKAIPFL---------------LKKQFALADKLVLS 333
Query: 239 KIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 297
K++ +G K GG L I LF+ AIG+ +++GYG+TE++ ++ S
Sbjct: 334 KLRQLLGGRIKMMPCGGAKLEPAIGLFFHAIGINIKLGYGMTETTATVSCWHDFQFNPNS 393
Query: 298 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 357
+G + E+KI E NE+L VRG VM+GY+K P T QA EDG+L TG
Sbjct: 394 IGTLMPKAEVKI--GENNEIL---------VRGGMVMKGYYKKPEETAQAFTEDGFLKTG 442
Query: 358 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 417
D G G L + R K+ + S G+ + P +E + I QI +I
Sbjct: 443 DAGEFDEQ----------GNLFITDRIKELMKTSNGKYIAPQYIESKIGKDKFIEQIAII 492
Query: 418 GQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGE 464
++ A+IVP + + AK+L+I + D EL K I ++ +
Sbjct: 493 ADAKKYVSALIVPCFDSLEEYAKQLNIKYHDRLELLKNSDILKMFEQ 539
>gi|254292111|ref|ZP_04962885.1| long-chain-fatty-acid--CoA ligase, putative [Vibrio cholerae
AM-19226]
gi|150421979|gb|EDN13952.1| long-chain-fatty-acid--CoA ligase, putative [Vibrio cholerae
AM-19226]
Length = 601
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 138/466 (29%), Positives = 217/466 (46%), Gaps = 63/466 (13%)
Query: 31 IDLGRESRKAFSDSNDARKHYK--------YETIGSDDIATYVYTSGTTGNPKGVMLTHK 82
IDL + S D A+ H++ E DD+ T +YTSGTTG PKGVML ++
Sbjct: 142 IDLKQASCAMHWDEFVAQSHHQDRAPLDALIEQANYDDLFTLIYTSGTTGTPKGVMLDYR 201
Query: 83 NLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQ 141
N+ Q+ + D L LP HV+ERA ++ +G Y V ++++ L
Sbjct: 202 NIGAQLEGHDQRLNLTQEDVSLCFLPLSHVFERAWTAYVLYKGATNCYLQDVAHVREALA 261
Query: 142 RYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTR 201
+P M +VP YE ++S I +++ + R+V+ F + C +
Sbjct: 262 EVRPTVMCAVPRFYEKIFSAIHEKVAKAPLVRKVL--------FTWAVNMGAKMAVC-RQ 312
Query: 202 NQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMH 260
Q+QPS++ L H A+KLV K+++ +G + GG L
Sbjct: 313 QQRQPSWM---------------LQQSHQFADKLVLSKLRALLGGRINFMPCGGAKLDET 357
Query: 261 IDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA 320
I F+ AIG+ V++GYG+TE++ ++ C S+G + ++KI E NE+L
Sbjct: 358 IGRFFHAIGINVKLGYGMTETTATVSCWDDHCFNPDSIGLSMPGAQVKI--GENNEIL-- 413
Query: 321 GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVL 380
VRG VM+GY+K T ++ DE G+L TGD G I + G L +
Sbjct: 414 -------VRGPMVMRGYYKLDKETAESFDEHGFLRTGDAGHIDEN----------GNLFI 456
Query: 381 EGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAK 440
R K+ + S G+ + P +E A + I QI VI ++ A+IVP + + AK
Sbjct: 457 TDRIKELMKTSGGKYIAPQVIEGAIGKDHFIEQIAVIADTRKFVSALIVPCFDSLEEYAK 516
Query: 441 RLSIVHADASELSK--------EKTISLLYGELRKWTSKCSFQIGP 478
L+I + D EL K EK ++ L EL K+ F++ P
Sbjct: 517 ELNIKYHDRLELIKHSQVLEMFEKRVNDLQKELAKFEQVKKFRLLP 562
>gi|419838174|ref|ZP_14361612.1| AMP-binding enzyme family protein [Vibrio cholerae HC-46B1]
gi|421344598|ref|ZP_15795001.1| AMP-binding enzyme family protein [Vibrio cholerae HC-43B1]
gi|422308417|ref|ZP_16395567.1| AMP-binding enzyme family protein [Vibrio cholerae CP1035(8)]
gi|423736135|ref|ZP_17709325.1| AMP-binding enzyme family protein [Vibrio cholerae HC-41B1]
gi|424010468|ref|ZP_17753401.1| AMP-binding enzyme family protein [Vibrio cholerae HC-44C1]
gi|424660979|ref|ZP_18098226.1| AMP-binding enzyme family protein [Vibrio cholerae HE-16]
gi|395940678|gb|EJH51359.1| AMP-binding enzyme family protein [Vibrio cholerae HC-43B1]
gi|408049851|gb|EKG85040.1| AMP-binding enzyme family protein [Vibrio cholerae HE-16]
gi|408617687|gb|EKK90800.1| AMP-binding enzyme family protein [Vibrio cholerae CP1035(8)]
gi|408629107|gb|EKL01820.1| AMP-binding enzyme family protein [Vibrio cholerae HC-41B1]
gi|408856722|gb|EKL96417.1| AMP-binding enzyme family protein [Vibrio cholerae HC-46B1]
gi|408863097|gb|EKM02593.1| AMP-binding enzyme family protein [Vibrio cholerae HC-44C1]
Length = 601
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 138/466 (29%), Positives = 217/466 (46%), Gaps = 63/466 (13%)
Query: 31 IDLGRESRKAFSDSNDARKHYKY--------ETIGSDDIATYVYTSGTTGNPKGVMLTHK 82
IDL + S D A+ H++ E DD+ T +YTSGTTG PKGVML ++
Sbjct: 142 IDLKQASCAMHWDEFVAQSHHQVRAPLDALIEQANYDDLFTLIYTSGTTGTPKGVMLDYR 201
Query: 83 NLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQ 141
N+ Q+ + D L LP HV+ERA ++ +G Y V ++++ L
Sbjct: 202 NIGAQLEGHDQRLNLTQEDVSLCFLPLSHVFERAWTAYVLYKGATNCYLQDVAHVREALA 261
Query: 142 RYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTR 201
+P M +VP YE ++S I +++ + R+V+ F + C +
Sbjct: 262 EVRPTVMCAVPRFYEKIFSAIHEKVAKAPLVRKVL--------FTWAVNMGAKMAVC-RQ 312
Query: 202 NQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMH 260
Q+QPS++ L H A+KLV K+++ +G + GG L
Sbjct: 313 QQRQPSWM---------------LKQSHQFADKLVLSKLRALLGGRINFMPCGGAKLDET 357
Query: 261 IDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA 320
I F+ AIG+ V++GYG+TE++ ++ C S+G + ++KI E NE+L
Sbjct: 358 IGRFFHAIGINVKLGYGMTETTATVSCWDDHCFNPDSIGLSMPGAQVKI--GENNEIL-- 413
Query: 321 GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVL 380
VRG VM+GY+K T ++ DE G+L TGD G I + G L +
Sbjct: 414 -------VRGPMVMRGYYKLDKETAESFDEHGFLKTGDAGHIDEN----------GNLFI 456
Query: 381 EGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAK 440
R K+ + S G+ + P +E A + I QI VI ++ A+IVP + + AK
Sbjct: 457 TDRIKELMKTSGGKYIAPQVIEGAIGKDHFIEQIAVIADTRKFVSALIVPCFDSLEEYAK 516
Query: 441 RLSIVHADASELSK--------EKTISLLYGELRKWTSKCSFQIGP 478
L+I + D EL K EK ++ L EL K+ F++ P
Sbjct: 517 ELNIKYHDRLELIKHSQVLEMFEKRVNELQKELAKFEQVKKFRLLP 562
>gi|378696081|ref|YP_005178039.1| putative long-chain-fatty-acid--CoA ligase [Haemophilus influenzae
10810]
gi|301168604|emb|CBW28193.1| putative long-chain-fatty-acid--CoA ligase [Haemophilus influenzae
10810]
Length = 599
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 126/407 (30%), Positives = 192/407 (47%), Gaps = 47/407 (11%)
Query: 60 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGY 119
D+ T +YTSGTTG PKGVML + NL HQ+ + + + D LS LP H++ERA
Sbjct: 178 DLFTIIYTSGTTGEPKGVMLDYANLSHQLETHDLSLNVTDQDISLSFLPFSHIFERAWAA 237
Query: 120 FIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 178
+I RG L Y N ++ L +P M +VP YE +Y+ + ++ + R+++
Sbjct: 238 YILHRGAILCYLEDTNQVRSALTEIRPTLMCAVPRFYEKIYAAVLDKVQKAPKLRQIMFH 297
Query: 179 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 238
I + + F L N K +L L LA+KLV
Sbjct: 298 WAISVGQKH---------FDLRANNKDIPFL---------------LKKQFALADKLVLS 333
Query: 239 KIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 297
K++ +G K GG L I LF+ AIG+ +++GYG+TE++ ++ S
Sbjct: 334 KLRQLLGGRIKMMPCGGAKLEPAIGLFFHAIGINIKLGYGMTETTATVSCWHNFQFNPNS 393
Query: 298 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 357
+G + E+KI E NE+L VRG VM+GY+K P T QA EDG+L TG
Sbjct: 394 IGTLMPKAEVKI--GENNEIL---------VRGGMVMKGYYKKPEETAQAFTEDGFLKTG 442
Query: 358 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 417
D G G L + R K+ + S G+ + P +E + I QI +I
Sbjct: 443 DAGEFDEQ----------GNLFITDRIKELMKTSNGKYIAPQYIESKIGKDKFIEQIAII 492
Query: 418 GQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGE 464
++ A+IVP + + AK+L+I + D EL K I ++ +
Sbjct: 493 ADAKKYVSALIVPCFDSLEEYAKQLNIKYHDRLELLKNSDILKMFEQ 539
>gi|288941571|ref|YP_003443811.1| AMP-dependent synthetase and ligase [Allochromatium vinosum DSM
180]
gi|288896943|gb|ADC62779.1| AMP-dependent synthetase and ligase [Allochromatium vinosum DSM
180]
Length = 605
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 124/372 (33%), Positives = 185/372 (49%), Gaps = 48/372 (12%)
Query: 60 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGY 119
D+AT VYTSGTTG PKGVML+H N+L ++ +V D FLS LP H+ ER GY
Sbjct: 187 DLATIVYTSGTTGRPKGVMLSHHNILSNAHAVLTLVDVYGEDLFLSFLPLSHMLERTGGY 246
Query: 120 FI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 177
++ G + Y +V L +DL+ +P +I+VP V+E +Y I Q+ T A
Sbjct: 247 YLPMMAGSTVAYARSVAQLAEDLKAIRPTIIIAVPRVFERVYGRIADQLQTRPAP----V 302
Query: 178 RALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVY 237
R L ++ A ++E R+ + K+
Sbjct: 303 RWLFHLAVAVGWRDFLHEQGRAGRHPSLLLRPLL--------------------KRKVGD 342
Query: 238 KKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 297
+Q G + VSGG +LP + + +G+ + GYGLTE+SPV++ N+ S
Sbjct: 343 PVLQKLGGRLRVAVSGGAALPTDVARTFIGLGLPLIQGYGLTETSPVVSFNPLDDNIPES 402
Query: 298 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 357
VG PI +++I D +E+L ++G VMQGY+ N +AT L+ DGWL+TG
Sbjct: 403 VGVPIRGIQVRIGD--NDELL---------IKGENVMQGYWNNHAATAGVLNHDGWLHTG 451
Query: 358 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 417
D ++R G + + GR KD +VLS GE V P +LE A L Q++V+
Sbjct: 452 D-----------QARIQGDHIFITGRIKDILVLSNGEKVPPADLEMAIGLDPLFDQVMVV 500
Query: 418 GQDQRRPGAIIV 429
G+ Q GA++V
Sbjct: 501 GEGQSYLGALLV 512
>gi|417846422|ref|ZP_12492429.1| Putative long-chain-fatty-acid--CoA ligase [Haemophilus
haemolyticus M21639]
gi|341952560|gb|EGT79085.1| Putative long-chain-fatty-acid--CoA ligase [Haemophilus
haemolyticus M21639]
Length = 608
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 126/407 (30%), Positives = 192/407 (47%), Gaps = 47/407 (11%)
Query: 60 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGY 119
D+ T +YTSGTTG PKGVML + NL HQ+ + + + D LS LP H++ERA
Sbjct: 186 DLFTIIYTSGTTGEPKGVMLDYANLAHQLETHDLALNVTDQDISLSFLPFSHIFERAWAA 245
Query: 120 FIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 178
+I RG L Y N ++ L +P M +VP YE +Y+ + ++ + R+++
Sbjct: 246 YILHRGAILCYLEDTNQVRSALTEIRPTLMCAVPRFYEKIYAAVLDKVQKAPKLRQIMFH 305
Query: 179 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 238
I + + F L N K +L L LA+KLV
Sbjct: 306 WAISVGQKH---------FDLRANNKAIPFL---------------LKKQFALADKLVLS 341
Query: 239 KIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 297
K++ +G K GG L I LF+ AIG+ +++GYG+TE++ ++ S
Sbjct: 342 KLRQLLGGRIKMMPCGGAKLEPAIGLFFHAIGINIKLGYGMTETTATVSCWHDFQFNPNS 401
Query: 298 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 357
+G + E+KI E NE+L VRG VM+GY+K P T QA EDG+L TG
Sbjct: 402 IGTLMPKAEVKI--RENNEIL---------VRGGMVMKGYYKKPEETAQAFTEDGFLKTG 450
Query: 358 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 417
D G G L + R K+ + S G+ + P +E + I QI +I
Sbjct: 451 DAGEFDEQ----------GNLFITDRIKELMKTSNGKYIAPQYIESKIGKDKFIEQIAII 500
Query: 418 GQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGE 464
++ A+IVP + + AK+L+I + D EL K I ++ +
Sbjct: 501 ADAKKYVSALIVPCFDSLEEYAKQLNIKYHDRLELLKNSEILKMFEQ 547
>gi|229846920|ref|ZP_04467026.1| putative long-chain-fatty-acid--CoA ligase [Haemophilus influenzae
7P49H1]
gi|229810004|gb|EEP45724.1| putative long-chain-fatty-acid--CoA ligase [Haemophilus influenzae
7P49H1]
Length = 599
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 125/407 (30%), Positives = 193/407 (47%), Gaps = 47/407 (11%)
Query: 60 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGY 119
D+ T +YTSGTTG PKGVML + NL HQ+ + + + D LS LP H++ERA
Sbjct: 178 DLFTIIYTSGTTGEPKGVMLDYANLAHQLETHDLSLNVTDQDISLSFLPFSHIFERAWAA 237
Query: 120 FIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 178
+I RG L Y N ++ L +P M +VP YE +Y+ + ++ + R+++
Sbjct: 238 YILHRGTILCYLEDTNQVRSALTEIRPTLMCAVPRFYEKIYAAVLDKVQKAPKLRQIMFH 297
Query: 179 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 238
I + + F L N K +I +L LA+KLV
Sbjct: 298 WAISVGQKH---------FDLRTNNK---------------VIPFLLKKQFALADKLVLS 333
Query: 239 KIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 297
K++ +G K GG L I LF+ AIG+ +++GYG+TE++ ++ S
Sbjct: 334 KLRQLLGGRIKMMPCGGAKLEPAIGLFFHAIGINIKLGYGMTETTATVSCWHDFQFNPNS 393
Query: 298 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 357
+G + E+KI E NE+L VRG VM+GY+K P T QA EDG+L TG
Sbjct: 394 IGTLMPKAEVKI--GENNEIL---------VRGGMVMKGYYKKPEETAQAFTEDGFLKTG 442
Query: 358 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 417
D G G L + R K+ + S G+ + P +E + I QI +I
Sbjct: 443 DAGEFDEQ----------GNLFITDRIKELMKTSNGKYIAPQYIESKIGKDKFIEQIAII 492
Query: 418 GQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGE 464
++ A+IVP + + AK+++I + D EL K I ++ +
Sbjct: 493 ADAKKYVSALIVPCFDSLEEYAKQINIKYHDRLELLKNSDILKMFEQ 539
>gi|153216942|ref|ZP_01950706.1| long-chain-fatty-acid--CoA ligase, putative [Vibrio cholerae 1587]
gi|419830916|ref|ZP_14354401.1| AMP-binding enzyme family protein [Vibrio cholerae HC-1A2]
gi|419834601|ref|ZP_14358055.1| AMP-binding enzyme family protein [Vibrio cholerae HC-61A2]
gi|422918315|ref|ZP_16952629.1| AMP-binding enzyme family protein [Vibrio cholerae HC-02A1]
gi|423823214|ref|ZP_17717222.1| AMP-binding enzyme family protein [Vibrio cholerae HC-55C2]
gi|423857175|ref|ZP_17721024.1| AMP-binding enzyme family protein [Vibrio cholerae HC-59A1]
gi|423884451|ref|ZP_17724618.1| AMP-binding enzyme family protein [Vibrio cholerae HC-60A1]
gi|423998737|ref|ZP_17741987.1| AMP-binding enzyme family protein [Vibrio cholerae HC-02C1]
gi|424017639|ref|ZP_17757465.1| AMP-binding enzyme family protein [Vibrio cholerae HC-55B2]
gi|424020556|ref|ZP_17760337.1| AMP-binding enzyme family protein [Vibrio cholerae HC-59B1]
gi|424625937|ref|ZP_18064396.1| AMP-binding enzyme family protein [Vibrio cholerae HC-50A1]
gi|424630421|ref|ZP_18068703.1| AMP-binding enzyme family protein [Vibrio cholerae HC-51A1]
gi|424634468|ref|ZP_18072566.1| AMP-binding enzyme family protein [Vibrio cholerae HC-52A1]
gi|424637547|ref|ZP_18075553.1| AMP-binding enzyme family protein [Vibrio cholerae HC-55A1]
gi|424641450|ref|ZP_18079330.1| AMP-binding enzyme family protein [Vibrio cholerae HC-56A1]
gi|424649523|ref|ZP_18087183.1| AMP-binding enzyme family protein [Vibrio cholerae HC-57A1]
gi|443528441|ref|ZP_21094477.1| AMP-binding enzyme family protein [Vibrio cholerae HC-78A1]
gi|124114037|gb|EAY32857.1| long-chain-fatty-acid--CoA ligase, putative [Vibrio cholerae 1587]
gi|341635360|gb|EGS60078.1| AMP-binding enzyme family protein [Vibrio cholerae HC-02A1]
gi|408011114|gb|EKG48950.1| AMP-binding enzyme family protein [Vibrio cholerae HC-50A1]
gi|408017056|gb|EKG54578.1| AMP-binding enzyme family protein [Vibrio cholerae HC-52A1]
gi|408022056|gb|EKG59285.1| AMP-binding enzyme family protein [Vibrio cholerae HC-56A1]
gi|408022492|gb|EKG59701.1| AMP-binding enzyme family protein [Vibrio cholerae HC-55A1]
gi|408031293|gb|EKG67929.1| AMP-binding enzyme family protein [Vibrio cholerae HC-57A1]
gi|408053493|gb|EKG88507.1| AMP-binding enzyme family protein [Vibrio cholerae HC-51A1]
gi|408620689|gb|EKK93701.1| AMP-binding enzyme family protein [Vibrio cholerae HC-1A2]
gi|408634322|gb|EKL06585.1| AMP-binding enzyme family protein [Vibrio cholerae HC-55C2]
gi|408639779|gb|EKL11586.1| AMP-binding enzyme family protein [Vibrio cholerae HC-59A1]
gi|408640101|gb|EKL11902.1| AMP-binding enzyme family protein [Vibrio cholerae HC-60A1]
gi|408648734|gb|EKL20069.1| AMP-binding enzyme family protein [Vibrio cholerae HC-61A2]
gi|408852179|gb|EKL92023.1| AMP-binding enzyme family protein [Vibrio cholerae HC-02C1]
gi|408858681|gb|EKL98353.1| AMP-binding enzyme family protein [Vibrio cholerae HC-55B2]
gi|408866754|gb|EKM06131.1| AMP-binding enzyme family protein [Vibrio cholerae HC-59B1]
gi|443453260|gb|ELT17091.1| AMP-binding enzyme family protein [Vibrio cholerae HC-78A1]
Length = 601
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 138/466 (29%), Positives = 217/466 (46%), Gaps = 63/466 (13%)
Query: 31 IDLGRESRKAFSDSNDARKHYK--------YETIGSDDIATYVYTSGTTGNPKGVMLTHK 82
IDL + S D A+ H++ E DD+ T +YTSGTTG PKGVML ++
Sbjct: 142 IDLKQASCAMHWDEFVAQSHHQDRAPLNALIEQANYDDLFTLIYTSGTTGTPKGVMLDYR 201
Query: 83 NLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQ 141
N+ Q+ + D L LP HV+ERA ++ +G Y V ++++ L
Sbjct: 202 NIGAQLEGHDQRLNLTQEDVSLCFLPLSHVFERAWTAYVLYKGATNCYLQDVAHVREALA 261
Query: 142 RYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTR 201
+P M +VP YE ++S I +++ + R+V+ F + C +
Sbjct: 262 EVRPTVMCAVPRFYEKIFSAIHEKVAKAPLVRKVL--------FTWAVNMGAKMAVC-RQ 312
Query: 202 NQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMH 260
Q+QPS++ L H A+KLV K+++ +G + GG L
Sbjct: 313 QQRQPSWM---------------LKQSHQFADKLVLSKLRALLGGRINFMPCGGAKLDET 357
Query: 261 IDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA 320
I F+ AIG+ V++GYG+TE++ ++ C S+G + ++KI E NE+L
Sbjct: 358 IGRFFHAIGINVKLGYGMTETTATVSCWDDHCFNPDSIGLSMPGAQVKI--GENNEIL-- 413
Query: 321 GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVL 380
VRG VM+GY+K T ++ DE G+L TGD G I + G L +
Sbjct: 414 -------VRGPMVMRGYYKLDKETAESFDEHGFLKTGDAGHIDEN----------GNLFI 456
Query: 381 EGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAK 440
R K+ + S G+ + P +E A + I QI VI ++ A+IVP + + AK
Sbjct: 457 TDRIKELMKTSGGKYIAPQVIEGAIGKDHFIEQIAVIADTRKFVSALIVPCFDSLEEYAK 516
Query: 441 RLSIVHADASELSK--------EKTISLLYGELRKWTSKCSFQIGP 478
L+I + D EL K EK ++ L EL K+ F++ P
Sbjct: 517 ELNIKYHDRLELIKHSQVLEMFEKRVNELQKELAKFEQVKKFRLLP 562
>gi|153830473|ref|ZP_01983140.1| putative long-chain-fatty-acid--CoA ligase [Vibrio cholerae 623-39]
gi|148874039|gb|EDL72174.1| putative long-chain-fatty-acid--CoA ligase [Vibrio cholerae 623-39]
Length = 601
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 138/466 (29%), Positives = 217/466 (46%), Gaps = 63/466 (13%)
Query: 31 IDLGRESRKAFSDSNDARKHYK--------YETIGSDDIATYVYTSGTTGNPKGVMLTHK 82
IDL + S D A+ H++ E DD+ T +YTSGTTG PKGVML ++
Sbjct: 142 IDLKQASCAMHWDEFVAQSHHQDRAPLDALIEQANYDDLFTLIYTSGTTGTPKGVMLDYR 201
Query: 83 NLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQ 141
N+ Q+ + D L LP HV+ERA ++ +G Y V ++++ L
Sbjct: 202 NIGAQLEGHDQRLNLTQEDVSLCFLPLSHVFERAWTAYVLYKGATNCYLQDVAHVREALA 261
Query: 142 RYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTR 201
+P M +VP YE ++S I +++ + R+V+ F + C +
Sbjct: 262 EVRPTVMCAVPRFYEKIFSAIHEKVAKAPLVRKVL--------FTWAVNMGAKMAVC-RQ 312
Query: 202 NQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMH 260
Q+QPS++ L H A+KLV K+++ +G + GG L
Sbjct: 313 QQRQPSWM---------------LKQSHQFADKLVLSKLRALLGGRINFMPCGGAKLDET 357
Query: 261 IDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA 320
I F+ AIG+ V++GYG+TE++ ++ C S+G + ++KI E NE+L
Sbjct: 358 IGRFFHAIGINVKLGYGMTETTATVSCWDDHCFNPDSIGLSMPGAQVKI--GENNEIL-- 413
Query: 321 GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVL 380
VRG VM+GY+K T ++ DE G+L TGD G I + G L +
Sbjct: 414 -------VRGPMVMRGYYKLDKETTESFDEHGFLKTGDAGHIDEN----------GNLFI 456
Query: 381 EGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAK 440
R K+ + S G+ + P +E A + I QI VI ++ A+IVP + + AK
Sbjct: 457 TDRIKELMKTSGGKYIAPQVIEGAIGKDHFIEQIAVIADTRKFVSALIVPCFDSLEEYAK 516
Query: 441 RLSIVHADASELSK--------EKTISLLYGELRKWTSKCSFQIGP 478
L+I + D EL K EK ++ L EL K+ F++ P
Sbjct: 517 ELNIKYHDRLELIKHSQVLEMFEKRVNELQKELAKFEQVKKFRLLP 562
>gi|417840982|ref|ZP_12487090.1| Putative long-chain-fatty-acid--CoA ligase [Haemophilus
haemolyticus M19501]
gi|341950793|gb|EGT77380.1| Putative long-chain-fatty-acid--CoA ligase [Haemophilus
haemolyticus M19501]
Length = 602
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 126/407 (30%), Positives = 191/407 (46%), Gaps = 47/407 (11%)
Query: 60 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGY 119
D+ T +YTSGTTG PKGVML + NL HQ+ + + + D LS LP H++ERA
Sbjct: 178 DLFTIIYTSGTTGEPKGVMLDYANLAHQLEAHDLSLNVTDQDVSLSFLPFSHIFERAWAA 237
Query: 120 FIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 178
+I RG L Y N ++ L +P M +VP YE +Y+ + ++ + R+++
Sbjct: 238 YILHRGAILCYLEDTNQVRSALTEIRPTLMCAVPRFYEKIYAAVLDKVQKAPKLRQIMFH 297
Query: 179 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 238
I + + F L N K +L L LA+KLV
Sbjct: 298 WAISVGQKH---------FDLRANNKAIPFL---------------LKKQFALADKLVLS 333
Query: 239 KIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 297
K++ +G K GG L I LF+ IG+ +++GYG+TE++ ++ S
Sbjct: 334 KLRQLLGGRIKMMPCGGAKLEPAIGLFFHVIGINIKLGYGMTETTATVSCWHDFQFNPNS 393
Query: 298 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 357
+G I E+KI E NE+L VRG VM+GY+K P T QA EDG+L TG
Sbjct: 394 IGTLIPKAEVKI--GENNEIL---------VRGGMVMKGYYKKPEETAQAFTEDGFLKTG 442
Query: 358 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 417
D G G L + R K+ + S G+ + P +E + I QI +I
Sbjct: 443 DAGEFDKQ----------GNLFITDRIKELMKTSNGKYIAPQYIESKIGKDKFIEQIAII 492
Query: 418 GQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGE 464
++ A+IVP + + AK+L+I + D EL K I ++ +
Sbjct: 493 ADAKKYVSALIVPCFDSLEEYAKQLNIKYHDRLELLKNSDILKMFEQ 539
>gi|384425421|ref|YP_005634779.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae LMA3984-4]
gi|327484974|gb|AEA79381.1| Long-chain-fatty-acid--CoA ligase [Vibrio cholerae LMA3984-4]
Length = 601
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 138/466 (29%), Positives = 217/466 (46%), Gaps = 63/466 (13%)
Query: 31 IDLGRESRKAFSDSNDARKHYK--------YETIGSDDIATYVYTSGTTGNPKGVMLTHK 82
IDL + S D A+ H++ E DD+ T +YTSGTTG PKGVML ++
Sbjct: 142 IDLKQASCAMHWDEFVAQSHHQDRAPLDALIEQANYDDLFTLIYTSGTTGTPKGVMLDYR 201
Query: 83 NLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQ 141
N+ Q+ + D L LP HV+ERA ++ +G Y V ++++ L
Sbjct: 202 NIGAQLEGHDQRLNLTQEDVSLCFLPLSHVFERAWTAYVLYKGATNCYLQDVAHVREALA 261
Query: 142 RYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTR 201
+P M +VP YE ++S I +++ + R+V+ F + C +
Sbjct: 262 EVRPTVMCAVPRFYEKIFSAIHEKVAKAPLVRKVL--------FTWAVNMGAKMAVC-RQ 312
Query: 202 NQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMH 260
Q+QPS++ L H A+KLV K+++ +G + GG L
Sbjct: 313 QQRQPSWM---------------LKQSHQFADKLVLSKLRALLGGRINFMPCGGAKLDET 357
Query: 261 IDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA 320
I F+ AIG+ V++GYG+TE++ ++ C S+G + ++KI E NE+L
Sbjct: 358 IGRFFHAIGINVKLGYGMTETTATVSCWDDHCFNPDSIGLSMPGAQVKI--GENNEIL-- 413
Query: 321 GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVL 380
VRG VM+GY+K T ++ DE G+L TGD G I + G L +
Sbjct: 414 -------VRGPMVMRGYYKLDKETAESFDEHGFLKTGDAGHIDEN----------GNLFI 456
Query: 381 EGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAK 440
R K+ + S G+ + P +E A + I QI VI ++ A+IVP + + AK
Sbjct: 457 TDRIKELMKTSGGKYIAPQVIEGAIGKDHFIEQIAVIADTRKFVSALIVPCFDSLEEYAK 516
Query: 441 RLSIVHADASELSK--------EKTISLLYGELRKWTSKCSFQIGP 478
L+I + D EL K EK ++ L EL K+ F++ P
Sbjct: 517 ELNIKYHDRLELIKHSQVLEMFEKRVNELQKELAKFEQVKKFRLLP 562
>gi|393786196|ref|ZP_10374332.1| hypothetical protein HMPREF1068_00612 [Bacteroides nordii
CL02T12C05]
gi|392659825|gb|EIY53442.1| hypothetical protein HMPREF1068_00612 [Bacteroides nordii
CL02T12C05]
Length = 601
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 132/439 (30%), Positives = 206/439 (46%), Gaps = 56/439 (12%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSM--LPPWHVYERA 116
DD+A +YTSGTTG PKGVML H L R ++DI + D+ +SM LP HV+E+A
Sbjct: 180 DDLANILYTSGTTGEPKGVMLHHSCFLEAFR-IHDIRLVDMTDEDVSMNFLPLTHVFEKA 238
Query: 117 CGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 175
Y +G+++ +++ ++ +P M SVP +E +Y+G+Q++I ++ ++
Sbjct: 239 WSYLCIYKGVQICVNLRPADIQMTIKEIRPTLMCSVPRFWEKVYAGVQEKIAETTGIKKT 298
Query: 176 VARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKL 235
+ IR+ RI+ R K P ++ L + EK
Sbjct: 299 LMMDAIRVG-------RIH-NIDYIRQGKTPPLMLHL---------------KYKFYEKT 335
Query: 236 VYKKIQSAIGISKAGV--SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCN 293
+Y ++ IGI + G ++P I F ++G+ + VGYGLTES+ ++ T
Sbjct: 336 IYSLLKKTIGIENGNFFPTAGAAVPDEICEFVHSVGIDMLVGYGLTESTATVSCTSKTGY 395
Query: 294 VLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGW 353
+GSVG + E+KI E NE+L +RG + +GY+K AT +D DGW
Sbjct: 396 DIGSVGQVMPDVEVKI--GEDNEIL---------LRGKTITKGYYKKAEATAATIDADGW 444
Query: 354 LNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQ 413
+TGD G+ G L L R KD S G+ + P LE + I Q
Sbjct: 445 FHTGDAGYFK-----------NGQLYLTERIKDLFKTSNGKYIAPQALETKLVIDRYIDQ 493
Query: 414 IVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSKCS 473
I +I ++ A+IVP V AK I + D EL + I L+ R T +
Sbjct: 494 IAIIADQRKFVSALIVPVYGFVKDYAKEKGIEYKDMEELLQHPKIVGLF-RARIDTLQQQ 552
Query: 474 F----QIGPIHVVDEPFTV 488
F QI ++ EPF++
Sbjct: 553 FANYEQIKRFTLLPEPFSM 571
>gi|417843442|ref|ZP_12489516.1| Putative long-chain-fatty-acid--CoA ligase [Haemophilus
haemolyticus M21127]
gi|341949585|gb|EGT76188.1| Putative long-chain-fatty-acid--CoA ligase [Haemophilus
haemolyticus M21127]
Length = 602
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 125/407 (30%), Positives = 192/407 (47%), Gaps = 47/407 (11%)
Query: 60 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGY 119
D+ T +YTSGTTG PKGVML + NL HQ+ + + + D LS LP H++ERA
Sbjct: 178 DLFTIIYTSGTTGEPKGVMLDYANLAHQLEAHDLSLNVTDRDISLSFLPFSHIFERAWAA 237
Query: 120 FIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 178
+I RG L Y N ++ L +P M +VP YE +Y+ + ++ + R+++
Sbjct: 238 YILHRGAILCYLEDTNQVRSTLTEIRPTLMCAVPRFYEKIYAAVLDKVQKAPKLRQIMFH 297
Query: 179 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 238
I + + F L N K +L L LA+KLV
Sbjct: 298 WAISVGQKH---------FDLRANNKAIPFL---------------LKKQFALADKLVLS 333
Query: 239 KIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 297
K++ +G K GG L I LF+ AIG+ +++GYG+TE++ ++ S
Sbjct: 334 KLRQLLGGRIKMMPCGGAKLEPAIGLFFHAIGINIKLGYGMTETTATVSCWHDFQFNPNS 393
Query: 298 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 357
+G + E+KI E NE+L VRG VM+GY+K P T QA EDG+L TG
Sbjct: 394 IGTLMPKAEVKI--GENNEIL---------VRGGMVMKGYYKKPEETAQAFTEDGFLKTG 442
Query: 358 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 417
D G G L + R K+ + S G+ + P +E + + QI +I
Sbjct: 443 DAGEFDEQ----------GNLFITDRIKELMKTSNGKYIAPQYIESKIGKDKFVEQIAII 492
Query: 418 GQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGE 464
++ A+IVP + + AK+L+I + D EL K I ++ +
Sbjct: 493 ADAKKYVSALIVPCFDSLEEYAKQLNIKYHDRLELLKNSDILKMFEQ 539
>gi|297581107|ref|ZP_06943032.1| conserved hypothetical protein [Vibrio cholerae RC385]
gi|417821798|ref|ZP_12468412.1| AMP-binding enzyme family protein [Vibrio cholerae HE39]
gi|423958046|ref|ZP_17735514.1| AMP-binding enzyme family protein [Vibrio cholerae HE-40]
gi|423985757|ref|ZP_17739070.1| AMP-binding enzyme family protein [Vibrio cholerae HE-46]
gi|297534933|gb|EFH73769.1| conserved hypothetical protein [Vibrio cholerae RC385]
gi|340039429|gb|EGR00404.1| AMP-binding enzyme family protein [Vibrio cholerae HE39]
gi|408656122|gb|EKL27224.1| AMP-binding enzyme family protein [Vibrio cholerae HE-40]
gi|408663415|gb|EKL34290.1| AMP-binding enzyme family protein [Vibrio cholerae HE-46]
Length = 601
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 138/466 (29%), Positives = 217/466 (46%), Gaps = 63/466 (13%)
Query: 31 IDLGRESRKAFSDSNDARKHYK--------YETIGSDDIATYVYTSGTTGNPKGVMLTHK 82
IDL + S D A+ H++ E DD+ T +YTSGTTG PKGVML ++
Sbjct: 142 IDLKQASCAMHWDEFVAQSHHQDRAPLDALIEQANYDDLFTLIYTSGTTGTPKGVMLDYR 201
Query: 83 NLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQ 141
N+ Q+ + D L LP HV+ERA ++ +G Y V ++++ L
Sbjct: 202 NIGAQLEGHDQRLNLTQEDVSLCFLPLSHVFERAWTAYVLYKGATNCYLQDVAHVREALA 261
Query: 142 RYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTR 201
+P M +VP YE ++S I +++ + R+V+ F + C +
Sbjct: 262 EVRPTVMCAVPRFYEKIFSAIHEKVAKAPLVRKVL--------FTWAVNMGAKMAVC-RQ 312
Query: 202 NQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMH 260
Q+QPS++ L H A+KLV K+++ +G + GG L
Sbjct: 313 QQRQPSWM---------------LKQSHQFADKLVLSKLRALLGGRINFMPCGGAKLDET 357
Query: 261 IDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA 320
I F+ AIG+ V++GYG+TE++ ++ C S+G + ++KI E NE+L
Sbjct: 358 IGRFFHAIGINVKLGYGMTETTATVSCWDDHCFNPDSIGLSMPGAQVKI--GENNEIL-- 413
Query: 321 GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVL 380
VRG VM+GY+K T ++ DE G+L TGD G I + G L +
Sbjct: 414 -------VRGPMVMRGYYKLDKETAESFDEHGFLKTGDAGHIDEN----------GNLFI 456
Query: 381 EGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAK 440
R K+ + S G+ + P +E A + I QI VI ++ A+IVP + + AK
Sbjct: 457 TDRIKELMKTSGGKYIAPQVIEGAIGKDHFIEQIAVIADTRKFVSALIVPCFDSLEEYAK 516
Query: 441 RLSIVHADASELSK--------EKTISLLYGELRKWTSKCSFQIGP 478
L+I + D EL K EK ++ L EL K+ F++ P
Sbjct: 517 ELNIKYHDRLELIKHSQVLEMFEKRVNDLQKELAKFEQVKKFRLLP 562
>gi|162421030|ref|YP_001607310.1| AMP binding protein [Yersinia pestis Angola]
gi|165928221|ref|ZP_02224053.1| AMP binding protein [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165937755|ref|ZP_02226316.1| AMP binding protein [Yersinia pestis biovar Orientalis str. IP275]
gi|166009084|ref|ZP_02229982.1| AMP binding protein [Yersinia pestis biovar Antiqua str. E1979001]
gi|166212014|ref|ZP_02238049.1| AMP binding protein [Yersinia pestis biovar Antiqua str. B42003004]
gi|167422015|ref|ZP_02313768.1| AMP binding protein [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167426467|ref|ZP_02318220.1| AMP binding protein [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|270487868|ref|ZP_06204942.1| AMP-binding enzyme [Yersinia pestis KIM D27]
gi|294502628|ref|YP_003566690.1| AMP binding protein [Yersinia pestis Z176003]
gi|384121062|ref|YP_005503682.1| AMP binding protein [Yersinia pestis D106004]
gi|384124940|ref|YP_005507554.1| AMP binding protein [Yersinia pestis D182038]
gi|420577414|ref|ZP_15072171.1| AMP-binding enzyme family protein [Yersinia pestis PY-07]
gi|162353845|gb|ABX87793.1| AMP binding protein [Yersinia pestis Angola]
gi|165914167|gb|EDR32783.1| AMP binding protein [Yersinia pestis biovar Orientalis str. IP275]
gi|165919832|gb|EDR37133.1| AMP binding protein [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165992423|gb|EDR44724.1| AMP binding protein [Yersinia pestis biovar Antiqua str. E1979001]
gi|166206760|gb|EDR51240.1| AMP binding protein [Yersinia pestis biovar Antiqua str. B42003004]
gi|166960152|gb|EDR56173.1| AMP binding protein [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167054565|gb|EDR64373.1| AMP binding protein [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|262360658|gb|ACY57379.1| AMP binding protein [Yersinia pestis D106004]
gi|262364604|gb|ACY61161.1| AMP binding protein [Yersinia pestis D182038]
gi|270336372|gb|EFA47149.1| AMP-binding enzyme [Yersinia pestis KIM D27]
gi|294353087|gb|ADE63428.1| AMP binding protein [Yersinia pestis Z176003]
gi|391464203|gb|EIR22517.1| AMP-binding enzyme family protein [Yersinia pestis PY-07]
Length = 588
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 120/417 (28%), Positives = 205/417 (49%), Gaps = 51/417 (12%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 118
DD+ T +YTSGTTG PKGVML ++N+ Q+ + D LS LP HV+ERA
Sbjct: 169 DDLFTLIYTSGTTGEPKGVMLDYRNMAAQLYLHDQRLTLTPQDVSLSFLPLSHVFERAWS 228
Query: 119 YFIFSRGIELMYTAVRN---LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 175
+++ G + +Y +RN ++ +Q +P M +VP YE ++S I ++ + +RV
Sbjct: 229 FYVMHTGAQNVY--IRNTDWVRSAMQAVKPTVMCAVPRFYEKVFSAINDKVALAKWHQRV 286
Query: 176 VARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKL 235
+ + FKR+ +G +P + WL + ++ LA++L
Sbjct: 287 LFHWAV--GCGERKFKRLQQG--------RP------LPWLSEQ--------MYTLADRL 322
Query: 236 VYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNV 294
V +K++ +G + + G L +I LF++AIGV ++ GYG+TE+ ++
Sbjct: 323 VLRKLRGVLGGRVRFLPAAGARLDDNIILFFQAIGVNIKYGYGMTETCATVSCWEEQNFR 382
Query: 295 LGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWL 354
GS+G P+ ++++ G++ ++VRG VM+GYFK P T +A EDGWL
Sbjct: 383 FGSIGKPLPGIDVRL-----------GAENEIQVRGPIVMRGYFKKPQETLEAFTEDGWL 431
Query: 355 NTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQI 414
TGD G + G L + R KD + S G+ + P +E + I Q+
Sbjct: 432 KTGDAGALDAQ----------GHLFITERLKDLMKTSGGKYIAPQMIEGTLGQDRFIEQV 481
Query: 415 VVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSK 471
+I ++ A+IVP E + A+ +++ + D EL + I ++ + K K
Sbjct: 482 AIIADTRKFVSALIVPSFESLEEYARSINLKYHDRLELLRHSHIVNMFEQRLKEIQK 538
>gi|145223549|ref|YP_001134227.1| AMP-dependent synthetase and ligase [Mycobacterium gilvum PYR-GCK]
gi|315443896|ref|YP_004076775.1| AMP-forming long-chain acyl-CoA synthetase [Mycobacterium gilvum
Spyr1]
gi|145216035|gb|ABP45439.1| AMP-dependent synthetase and ligase [Mycobacterium gilvum PYR-GCK]
gi|315262199|gb|ADT98940.1| AMP-forming long-chain acyl-CoA synthetase [Mycobacterium gilvum
Spyr1]
Length = 601
Score = 171 bits (434), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 133/414 (32%), Positives = 191/414 (46%), Gaps = 60/414 (14%)
Query: 24 VFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKN 83
V + DE+ + G A D + +I S D AT +YTSGTTG PKG LTH N
Sbjct: 154 VPALDELAEAGASVDAAAVDE-------RVASIRSTDAATLIYTSGTTGRPKGCQLTHSN 206
Query: 84 LLHQIRSLYDIVPAE--NGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDL 140
LL++IR P G+K L LP HV RA FS G+ L +T+ ++NL
Sbjct: 207 LLYEIRGAKACFPEHLAKGEKLLVFLPLAHVLARALTIGAFSNGVTLGFTSDIKNLVPMF 266
Query: 141 QRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLT 200
+QP ++SVP V+E +Y+ + T + A A I ++ K + G
Sbjct: 267 AVFQPTLVVSVPRVFEKVYNTAELNAETGGKGKIFTAAANTAIEYS----KALDSG---- 318
Query: 201 RNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIG-ISKAGVSGGGSLPM 259
P ++ L H L +KLVY K+++A+G A +SGG L
Sbjct: 319 ----GPGLVLKL---------------KHALFDKLVYGKLRAALGGRCHAAISGGAPLGA 359
Query: 260 HIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLP 319
+ FY +G+ + GYGLTE+S I R +GSVG + +++
Sbjct: 360 RLGHFYRGVGLSIYEGYGLTETSAAITVNRVGDLRVGSVGKLVPGNSMRL---------- 409
Query: 320 AGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLV 379
G G + VRG V GY+ N T+ A+ DGW +TGD+G I G L
Sbjct: 410 -GEDGELLVRGGVVFNGYWGNEEETR-AVFTDGWFHTGDLGAIDDD----------GFLT 457
Query: 380 LEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 433
+ GR K+ IV + G+NV P +LE+ LI Q + +G Q A+I D E
Sbjct: 458 IVGRKKEIIVTAGGKNVAPAQLEDRLRAHPLISQAMAVGDQQPFIAALITVDTE 511
>gi|218261977|ref|ZP_03476629.1| hypothetical protein PRABACTJOHN_02300, partial [Parabacteroides
johnsonii DSM 18315]
gi|218223656|gb|EEC96306.1| hypothetical protein PRABACTJOHN_02300 [Parabacteroides johnsonii
DSM 18315]
Length = 483
Score = 171 bits (434), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 125/427 (29%), Positives = 217/427 (50%), Gaps = 49/427 (11%)
Query: 54 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 113
+++ + D AT YTSGTT +PKGV+LTH+N + V ++ + L +LP H +
Sbjct: 21 QSLQNGDYATITYTSGTTADPKGVILTHRNYTANVEQALSCVDIDDTWRTLVILPLDHCF 80
Query: 114 ERACGYFIF-SRG-----IELMYTAVRNLKD---DLQRYQPHYMISVPLVYETLYSGIQK 164
G++IF S+G +++ T + LK+ +++ ++P+ ++SVP + + I++
Sbjct: 81 AHVVGFYIFMSKGASVATVQVGRTGLETLKNIPVNIKEFKPYLILSVPALAKNFKKNIEQ 140
Query: 165 QIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAI 224
I R + + R+ IY G + +L
Sbjct: 141 GI-------RAQGKHVTRLFNFALKVAYIYNGDGGEDKGRGARFL--------------- 178
Query: 225 LWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSP 283
L PL L +++++ K++ G K + GG L + FY AIG+ + GYGL+E++P
Sbjct: 179 LKPLVSLFDRVLFTKVRENFGGQLKFFIGGGALLDKDLQKFYYAIGLPMYQGYGLSEATP 238
Query: 284 VIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSA 343
VI+ P + GS G + ++KI DAE E LP G KG + +RG VM GY+KNP +
Sbjct: 239 VISTNGPHRHTFGSSGVLVRPLDLKICDAEGKE-LPTGEKGEIVIRGENVMAGYWKNPVS 297
Query: 344 TKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEE 403
T + + +GWL TGD+G++ H G+L + GR K ++ S GE P +EE
Sbjct: 298 TAETV-RNGWLYTGDMGYMG--HD--------GLLYVLGRFKSLLIGSDGEKYSPEGIEE 346
Query: 404 AALR-SSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHAD-ASELSKEKTISLL 461
A + SS I Q+++ A++VP+K+ + K L+ H D +S+ +E+ I ++
Sbjct: 347 ALVEHSSCIDQLILYNNQSPYTVALVVPNKDRL---KKHLAHQHLDLSSDKGREEAIRII 403
Query: 462 YGELRKW 468
++ ++
Sbjct: 404 QSQIDRF 410
>gi|23464868|ref|NP_695471.1| long-chain-fatty acid CoA ligase [Bifidobacterium longum NCC2705]
gi|23325456|gb|AAN24107.1| probable long-chain-fatty acid CoA ligase [Bifidobacterium longum
NCC2705]
Length = 607
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 131/465 (28%), Positives = 217/465 (46%), Gaps = 69/465 (14%)
Query: 45 NDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNL----LHQIRSLYDIVPAENG 100
+D H + T+ +DD+AT VYTSG+TGNPKG LTHKN + ++L+++V ++
Sbjct: 168 SDEELHERVATVRTDDLATIVYTSGSTGNPKGAELTHKNFVSITISASQALHEVV-LDDH 226
Query: 101 DKFLSMLPPWHVYERACGYFIFSR--GIELMYTAVRNLKDDLQRYQPHYMISVPLVYETL 158
+ L LP H + R Y + G+ + L DL+ ++P Y++ VP V+E +
Sbjct: 227 PRLLLFLPLAHCFARFIQYASIASDDGVVGYLPDTKTLLPDLRSFEPTYLLGVPRVFEKV 286
Query: 159 YSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWA 218
Y+ + R V A + ++ ++ E ++ Y
Sbjct: 287 YNAASHKAGAGWKGRLFVKAA--EAARVWSRKEQAGEQHTFAEIAERAKY---------- 334
Query: 219 RIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDL--FYEAIGVKVQVGY 276
E LVY+ ++ A+G V+ GG+ P+ +DL FY IG+ + GY
Sbjct: 335 --------------ETLVYRTVRGALGPKIKYVACGGA-PLSLDLAHFYNGIGLPMIQGY 379
Query: 277 GLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQG 336
G+TE++ AA R T NV+G+VG P + I+I D +G ++V+G V +G
Sbjct: 380 GMTETAAPFAATRVTDNVIGTVGQPAPGSSIRISD-----------EGELQVKGPNVFRG 428
Query: 337 YFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENV 396
Y P T +A DGWL TGD+ I G +V+ GR KD I+ + G+NV
Sbjct: 429 YHNLPEKTAEAFTADGWLRTGDLAEIDDE----------GHIVITGRIKDIIITAGGKNV 478
Query: 397 EPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVL--MAAKRLSIVHADASELSK 454
P+ LEE + ++ VV+G + GA++ D E + + A LS + + +
Sbjct: 479 SPIPLEEEIAKCPIVEHCVVVGDQRPFIGALVTLDPESLALWLPAHGLST----ETPVDR 534
Query: 455 EKTISLLYGELRKWTSKCSFQIG------PIHVVDEPFTVNFLCL 493
T + + E++++ K + + V+D FT CL
Sbjct: 535 LATNAAVREEIQQYVDKANATVSRAESVRKFAVLDTQFTQENKCL 579
>gi|448391685|ref|ZP_21566780.1| AMP-dependent synthetase and ligase [Haloterrigena salina JCM
13891]
gi|445665097|gb|ELZ17775.1| AMP-dependent synthetase and ligase [Haloterrigena salina JCM
13891]
Length = 660
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 129/394 (32%), Positives = 195/394 (49%), Gaps = 57/394 (14%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYD-IVPAENGD----------KFLSML 107
DD+A+ +YTSGTTG PKGV LTH+NL + LY P ++ D + LS+L
Sbjct: 212 DDLASLIYTSGTTGKPKGVKLTHRNLRSNVNQLYRRYGPRDDKDEDDPSITPESRALSVL 271
Query: 108 PPWHVYERACGYF-IFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQ 165
P HV+ER G+F +F+ G + Y + +DL +VP VYE LY GI++
Sbjct: 272 PLAHVFERTAGHFMLFAAGACIAYGESPETFAEDLGAVGATSTTAVPRVYEKLYDGIRES 331
Query: 166 IFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAIL 225
+ + AL ++ Y A ++ S L
Sbjct: 332 AAADEDTKEALEWAL-DVARRYNA--------ADDPGEELESELAD-------------- 368
Query: 226 WPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPV 284
A++LV+ I+ +G + + VSGGGSL + + +G+ + GYG+TE+SPV
Sbjct: 369 ------ADELVFATIREKLGGNIEFLVSGGGSLSPDLCQLFHTMGLSIVEGYGMTETSPV 422
Query: 285 IAARRPTCNVLGSVGHPINHTEIKIVDAET--NEVL-PAGSKGIVKVRGSQVMQGYFKNP 341
IA +P+ +G+VG + E K+ DA +E G+ G + VRG V +GY++ P
Sbjct: 423 IATNQPSDPRVGTVGPALAGVETKL-DASVVRDEAFDDEGTVGELLVRGPNVTEGYWEKP 481
Query: 342 SATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLEL 401
AT +A E GWL TGDI R G L R K +VLSTG+NV P L
Sbjct: 482 GATDRAFTEAGWLRTGDI----------VHERPDGYLEFRERTKQLLVLSTGKNVAPGPL 531
Query: 402 EEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 435
E+A ++ Q +V+G ++ GA++VP+ +E+
Sbjct: 532 EDAFASVDVVEQAMVVGDGEKFVGALLVPNVDEL 565
>gi|338533716|ref|YP_004667050.1| putative long-chain-fatty-acid--CoA ligase [Myxococcus fulvus HW-1]
gi|337259812|gb|AEI65972.1| putative long-chain-fatty-acid--CoA ligase [Myxococcus fulvus HW-1]
Length = 604
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 122/408 (29%), Positives = 195/408 (47%), Gaps = 42/408 (10%)
Query: 60 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG- 118
D+A +YTSGTTG PKGVML+H N+ + +++++ P D+ L+ LP HV+ +
Sbjct: 170 DLAGLIYTSGTTGQPKGVMLSHANIARNVSAMHEVFPMGTDDRSLAFLPWAHVFGQTVEL 229
Query: 119 YFIFSRGIEL-MYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 177
+ +FS G + + AV + D+L +P + SVP ++ +Y G+QK++ A + V
Sbjct: 230 HALFSMGASMAIAEAVEKIIDNLSEVKPTLLFSVPRIFNRIYDGLQKRM----AGEKPVT 285
Query: 178 RALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVY 237
R + R A A KR Q + S L+ L H +K+V+
Sbjct: 286 RFMFRRGLAVAAEKRALA------EQGKSSGLLDL---------------QHAFFDKVVF 324
Query: 238 KKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLG 296
K+++ G K SGG ++ + F + +G+ V GYGLTE+SP+ A P +G
Sbjct: 325 SKVRARFGGRLKYAFSGGSAISKEVAEFIDNLGITVYEGYGLTETSPIATANFPENRKIG 384
Query: 297 SVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNT 356
SVG + I+I A T E +G + V G VM GY+ P ++ +G T
Sbjct: 385 SVGKALPGVRIEIDTAATGEA----KQGEIVVHGHNVMMGYYNKPEENEKVFTGNGGFRT 440
Query: 357 GDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVV 416
GD+G++ P G L + GR K+ L G+ V P +E++ S+ I +V
Sbjct: 441 GDMGYLDPD----------GYLYITGRIKEQYKLENGKYVVPSPIEQSLALSTYIANALV 490
Query: 417 IGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGE 464
G ++ AIIV D + + A + + EL K + LY E
Sbjct: 491 HGMNKPYNVAIIVVDVDALKKWATEKGLDTSSMPELLKRPEVLQLYRE 538
>gi|22127515|ref|NP_670938.1| fatty acid biosynthesis protein [Yersinia pestis KIM10+]
gi|45443377|ref|NP_994916.1| AMP-binding protein [Yersinia pestis biovar Microtus str. 91001]
gi|51595024|ref|YP_069215.1| AMP-binding protein [Yersinia pseudotuberculosis IP 32953]
gi|108809552|ref|YP_653468.1| AMP-binding protein [Yersinia pestis Antiqua]
gi|108810571|ref|YP_646338.1| AMP-binding enzyme-family protein [Yersinia pestis Nepal516]
gi|145600359|ref|YP_001164435.1| AMP-binding enzyme-family protein [Yersinia pestis Pestoides F]
gi|150260427|ref|ZP_01917155.1| putative AMP-binding enzyme-family protein [Yersinia pestis
CA88-4125]
gi|167401298|ref|ZP_02306798.1| AMP binding protein [Yersinia pestis biovar Antiqua str. UG05-0454]
gi|167469510|ref|ZP_02334214.1| AMP-binding enzyme-family protein [Yersinia pestis FV-1]
gi|186894030|ref|YP_001871142.1| AMP-dependent synthetase and ligase [Yersinia pseudotuberculosis
PB1/+]
gi|218927734|ref|YP_002345609.1| AMP-binding protein [Yersinia pestis CO92]
gi|229837070|ref|ZP_04457235.1| putative AMP-binding enzyme-family protein [Yersinia pestis
Pestoides A]
gi|229840427|ref|ZP_04460586.1| putative AMP-binding enzyme-family protein [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229843031|ref|ZP_04463181.1| putative AMP-binding enzyme-family protein [Yersinia pestis biovar
Orientalis str. India 195]
gi|229900762|ref|ZP_04515886.1| putative AMP-binding enzyme-family protein [Yersinia pestis
Nepal516]
gi|384137474|ref|YP_005520176.1| putative AMP-binding enzyme family protein [Yersinia pestis A1122]
gi|384416401|ref|YP_005625763.1| AMP-binding protein [Yersinia pestis biovar Medievalis str. Harbin
35]
gi|420545020|ref|ZP_15043194.1| AMP-binding enzyme family protein [Yersinia pestis PY-01]
gi|420550334|ref|ZP_15047944.1| AMP-binding enzyme family protein [Yersinia pestis PY-02]
gi|420555787|ref|ZP_15052795.1| AMP-binding enzyme family protein [Yersinia pestis PY-03]
gi|420561464|ref|ZP_15057743.1| AMP-binding enzyme family protein [Yersinia pestis PY-04]
gi|420566471|ref|ZP_15062259.1| AMP-binding enzyme family protein [Yersinia pestis PY-05]
gi|420572138|ref|ZP_15067409.1| AMP-binding enzyme family protein [Yersinia pestis PY-06]
gi|420582818|ref|ZP_15077101.1| AMP-binding enzyme family protein [Yersinia pestis PY-08]
gi|420587923|ref|ZP_15081705.1| AMP-binding enzyme family protein [Yersinia pestis PY-09]
gi|420593235|ref|ZP_15086488.1| AMP-binding enzyme family protein [Yersinia pestis PY-10]
gi|420598921|ref|ZP_15091580.1| AMP-binding enzyme family protein [Yersinia pestis PY-11]
gi|420604497|ref|ZP_15096554.1| AMP-binding enzyme family protein [Yersinia pestis PY-12]
gi|420609782|ref|ZP_15101353.1| AMP-binding enzyme family protein [Yersinia pestis PY-13]
gi|420615044|ref|ZP_15106032.1| AMP-binding enzyme family protein [Yersinia pestis PY-14]
gi|420620500|ref|ZP_15110796.1| AMP-binding enzyme family protein [Yersinia pestis PY-15]
gi|420625532|ref|ZP_15115359.1| AMP-binding enzyme family protein [Yersinia pestis PY-16]
gi|420630690|ref|ZP_15120043.1| AMP-binding enzyme family protein [Yersinia pestis PY-19]
gi|420635875|ref|ZP_15124675.1| AMP-binding enzyme family protein [Yersinia pestis PY-25]
gi|420641460|ref|ZP_15129713.1| AMP-binding enzyme family protein [Yersinia pestis PY-29]
gi|420646547|ref|ZP_15134377.1| AMP-binding enzyme family protein [Yersinia pestis PY-32]
gi|420652230|ref|ZP_15139474.1| AMP-binding enzyme family protein [Yersinia pestis PY-34]
gi|420657678|ref|ZP_15144390.1| AMP-binding enzyme family protein [Yersinia pestis PY-36]
gi|420663015|ref|ZP_15149150.1| AMP-binding enzyme family protein [Yersinia pestis PY-42]
gi|420668037|ref|ZP_15153693.1| AMP-binding enzyme family protein [Yersinia pestis PY-45]
gi|420673306|ref|ZP_15158487.1| AMP-binding enzyme family protein [Yersinia pestis PY-46]
gi|420678810|ref|ZP_15163495.1| AMP-binding enzyme family protein [Yersinia pestis PY-47]
gi|420684045|ref|ZP_15168199.1| AMP-binding enzyme family protein [Yersinia pestis PY-48]
gi|420689220|ref|ZP_15172794.1| AMP-binding enzyme family protein [Yersinia pestis PY-52]
gi|420695043|ref|ZP_15177883.1| AMP-binding enzyme family protein [Yersinia pestis PY-53]
gi|420700318|ref|ZP_15182477.1| AMP-binding enzyme family protein [Yersinia pestis PY-54]
gi|420706458|ref|ZP_15187366.1| AMP-binding enzyme family protein [Yersinia pestis PY-55]
gi|420711740|ref|ZP_15192153.1| AMP-binding enzyme family protein [Yersinia pestis PY-56]
gi|420717110|ref|ZP_15196904.1| AMP-binding enzyme family protein [Yersinia pestis PY-58]
gi|420722753|ref|ZP_15201715.1| AMP-binding enzyme family protein [Yersinia pestis PY-59]
gi|420728388|ref|ZP_15206728.1| AMP-binding enzyme family protein [Yersinia pestis PY-60]
gi|420733504|ref|ZP_15211337.1| AMP-binding enzyme family protein [Yersinia pestis PY-61]
gi|420738945|ref|ZP_15216250.1| AMP-binding enzyme family protein [Yersinia pestis PY-63]
gi|420744173|ref|ZP_15220912.1| AMP-binding enzyme family protein [Yersinia pestis PY-64]
gi|420750096|ref|ZP_15225911.1| AMP-binding enzyme family protein [Yersinia pestis PY-65]
gi|420755178|ref|ZP_15230426.1| AMP-binding enzyme family protein [Yersinia pestis PY-66]
gi|420761232|ref|ZP_15235264.1| AMP-binding enzyme family protein [Yersinia pestis PY-71]
gi|420766406|ref|ZP_15239947.1| AMP-binding enzyme family protein [Yersinia pestis PY-72]
gi|420771448|ref|ZP_15244459.1| AMP-binding enzyme family protein [Yersinia pestis PY-76]
gi|420776756|ref|ZP_15249244.1| AMP-binding enzyme family protein [Yersinia pestis PY-88]
gi|420782266|ref|ZP_15254076.1| AMP-binding enzyme family protein [Yersinia pestis PY-89]
gi|420787696|ref|ZP_15258841.1| AMP-binding enzyme family protein [Yersinia pestis PY-90]
gi|420793160|ref|ZP_15263766.1| AMP-binding enzyme family protein [Yersinia pestis PY-91]
gi|420798314|ref|ZP_15268393.1| AMP-binding enzyme family protein [Yersinia pestis PY-92]
gi|420803697|ref|ZP_15273239.1| AMP-binding enzyme family protein [Yersinia pestis PY-93]
gi|420808871|ref|ZP_15277923.1| AMP-binding enzyme family protein [Yersinia pestis PY-94]
gi|420814663|ref|ZP_15283110.1| AMP-binding enzyme family protein [Yersinia pestis PY-95]
gi|420819812|ref|ZP_15287780.1| AMP-binding enzyme family protein [Yersinia pestis PY-96]
gi|420824891|ref|ZP_15292321.1| AMP-binding enzyme family protein [Yersinia pestis PY-98]
gi|420830684|ref|ZP_15297549.1| AMP-binding enzyme family protein [Yersinia pestis PY-99]
gi|420835490|ref|ZP_15301881.1| AMP-binding enzyme family protein [Yersinia pestis PY-100]
gi|420840652|ref|ZP_15306562.1| AMP-binding enzyme family protein [Yersinia pestis PY-101]
gi|420846242|ref|ZP_15311620.1| AMP-binding enzyme family protein [Yersinia pestis PY-102]
gi|420851582|ref|ZP_15316374.1| AMP-binding enzyme family protein [Yersinia pestis PY-103]
gi|420857161|ref|ZP_15321079.1| AMP-binding enzyme family protein [Yersinia pestis PY-113]
gi|421761966|ref|ZP_16198766.1| AMP-binding protein [Yersinia pestis INS]
gi|21960614|gb|AAM87189.1|AE013966_6 putative fatty acid biosynthesis protein [Yersinia pestis KIM10+]
gi|45438246|gb|AAS63793.1| putative AMP-binding enzyme-family protein [Yersinia pestis biovar
Microtus str. 91001]
gi|51588306|emb|CAH19914.1| putative AMP-binding enzyme-family protein [Yersinia
pseudotuberculosis IP 32953]
gi|108774219|gb|ABG16738.1| AMP-binding enzyme-family protein [Yersinia pestis Nepal516]
gi|108781465|gb|ABG15523.1| putative AMP-binding enzyme-family protein [Yersinia pestis
Antiqua]
gi|115346345|emb|CAL19217.1| putative AMP-binding enzyme-family protein [Yersinia pestis CO92]
gi|145212055|gb|ABP41462.1| AMP-binding enzyme-family protein [Yersinia pestis Pestoides F]
gi|149289835|gb|EDM39912.1| putative AMP-binding enzyme-family protein [Yersinia pestis
CA88-4125]
gi|167049323|gb|EDR60731.1| AMP binding protein [Yersinia pestis biovar Antiqua str. UG05-0454]
gi|186697056|gb|ACC87685.1| AMP-dependent synthetase and ligase [Yersinia pseudotuberculosis
PB1/+]
gi|229682101|gb|EEO78193.1| putative AMP-binding enzyme-family protein [Yersinia pestis
Nepal516]
gi|229689907|gb|EEO81966.1| putative AMP-binding enzyme-family protein [Yersinia pestis biovar
Orientalis str. India 195]
gi|229696793|gb|EEO86840.1| putative AMP-binding enzyme-family protein [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229706013|gb|EEO92022.1| putative AMP-binding enzyme-family protein [Yersinia pestis
Pestoides A]
gi|320016905|gb|ADW00477.1| putative AMP-binding enzyme-family protein [Yersinia pestis biovar
Medievalis str. Harbin 35]
gi|342852603|gb|AEL71156.1| putative AMP-binding enzyme family protein [Yersinia pestis A1122]
gi|391432113|gb|EIQ93589.1| AMP-binding enzyme family protein [Yersinia pestis PY-01]
gi|391433167|gb|EIQ94530.1| AMP-binding enzyme family protein [Yersinia pestis PY-02]
gi|391435766|gb|EIQ96791.1| AMP-binding enzyme family protein [Yersinia pestis PY-03]
gi|391448197|gb|EIR08035.1| AMP-binding enzyme family protein [Yersinia pestis PY-04]
gi|391448895|gb|EIR08667.1| AMP-binding enzyme family protein [Yersinia pestis PY-05]
gi|391451533|gb|EIR11019.1| AMP-binding enzyme family protein [Yersinia pestis PY-06]
gi|391465843|gb|EIR23991.1| AMP-binding enzyme family protein [Yersinia pestis PY-08]
gi|391467875|gb|EIR25809.1| AMP-binding enzyme family protein [Yersinia pestis PY-09]
gi|391481271|gb|EIR37826.1| AMP-binding enzyme family protein [Yersinia pestis PY-10]
gi|391482068|gb|EIR38548.1| AMP-binding enzyme family protein [Yersinia pestis PY-12]
gi|391482202|gb|EIR38664.1| AMP-binding enzyme family protein [Yersinia pestis PY-11]
gi|391496452|gb|EIR51400.1| AMP-binding enzyme family protein [Yersinia pestis PY-13]
gi|391496986|gb|EIR51887.1| AMP-binding enzyme family protein [Yersinia pestis PY-15]
gi|391500587|gb|EIR55077.1| AMP-binding enzyme family protein [Yersinia pestis PY-14]
gi|391512101|gb|EIR65445.1| AMP-binding enzyme family protein [Yersinia pestis PY-16]
gi|391513827|gb|EIR67003.1| AMP-binding enzyme family protein [Yersinia pestis PY-19]
gi|391515786|gb|EIR68742.1| AMP-binding enzyme family protein [Yersinia pestis PY-25]
gi|391527621|gb|EIR79521.1| AMP-binding enzyme family protein [Yersinia pestis PY-29]
gi|391530383|gb|EIR81965.1| AMP-binding enzyme family protein [Yersinia pestis PY-34]
gi|391531818|gb|EIR83278.1| AMP-binding enzyme family protein [Yersinia pestis PY-32]
gi|391544753|gb|EIR94930.1| AMP-binding enzyme family protein [Yersinia pestis PY-36]
gi|391546312|gb|EIR96317.1| AMP-binding enzyme family protein [Yersinia pestis PY-42]
gi|391547089|gb|EIR97021.1| AMP-binding enzyme family protein [Yersinia pestis PY-45]
gi|391560924|gb|EIS09511.1| AMP-binding enzyme family protein [Yersinia pestis PY-46]
gi|391562030|gb|EIS10489.1| AMP-binding enzyme family protein [Yersinia pestis PY-47]
gi|391564074|gb|EIS12318.1| AMP-binding enzyme family protein [Yersinia pestis PY-48]
gi|391576223|gb|EIS22813.1| AMP-binding enzyme family protein [Yersinia pestis PY-52]
gi|391576897|gb|EIS23389.1| AMP-binding enzyme family protein [Yersinia pestis PY-53]
gi|391588442|gb|EIS33471.1| AMP-binding enzyme family protein [Yersinia pestis PY-55]
gi|391591017|gb|EIS35651.1| AMP-binding enzyme family protein [Yersinia pestis PY-54]
gi|391592228|gb|EIS36684.1| AMP-binding enzyme family protein [Yersinia pestis PY-56]
gi|391605408|gb|EIS48299.1| AMP-binding enzyme family protein [Yersinia pestis PY-60]
gi|391606856|gb|EIS49534.1| AMP-binding enzyme family protein [Yersinia pestis PY-58]
gi|391607670|gb|EIS50245.1| AMP-binding enzyme family protein [Yersinia pestis PY-59]
gi|391619729|gb|EIS60965.1| AMP-binding enzyme family protein [Yersinia pestis PY-61]
gi|391620669|gb|EIS61801.1| AMP-binding enzyme family protein [Yersinia pestis PY-63]
gi|391628887|gb|EIS68892.1| AMP-binding enzyme family protein [Yersinia pestis PY-64]
gi|391631216|gb|EIS70875.1| AMP-binding enzyme family protein [Yersinia pestis PY-65]
gi|391642571|gb|EIS80829.1| AMP-binding enzyme family protein [Yersinia pestis PY-71]
gi|391645313|gb|EIS83204.1| AMP-binding enzyme family protein [Yersinia pestis PY-72]
gi|391647623|gb|EIS85234.1| AMP-binding enzyme family protein [Yersinia pestis PY-66]
gi|391655007|gb|EIS91790.1| AMP-binding enzyme family protein [Yersinia pestis PY-76]
gi|391661827|gb|EIS97834.1| AMP-binding enzyme family protein [Yersinia pestis PY-88]
gi|391666695|gb|EIT02118.1| AMP-binding enzyme family protein [Yersinia pestis PY-89]
gi|391668514|gb|EIT03741.1| AMP-binding enzyme family protein [Yersinia pestis PY-90]
gi|391672685|gb|EIT07473.1| AMP-binding enzyme family protein [Yersinia pestis PY-91]
gi|391686125|gb|EIT19587.1| AMP-binding enzyme family protein [Yersinia pestis PY-93]
gi|391687645|gb|EIT20934.1| AMP-binding enzyme family protein [Yersinia pestis PY-92]
gi|391688868|gb|EIT22051.1| AMP-binding enzyme family protein [Yersinia pestis PY-94]
gi|391700243|gb|EIT32355.1| AMP-binding enzyme family protein [Yersinia pestis PY-95]
gi|391703587|gb|EIT35324.1| AMP-binding enzyme family protein [Yersinia pestis PY-96]
gi|391704373|gb|EIT36037.1| AMP-binding enzyme family protein [Yersinia pestis PY-98]
gi|391714573|gb|EIT45215.1| AMP-binding enzyme family protein [Yersinia pestis PY-99]
gi|391719942|gb|EIT50005.1| AMP-binding enzyme family protein [Yersinia pestis PY-100]
gi|391720466|gb|EIT50486.1| AMP-binding enzyme family protein [Yersinia pestis PY-101]
gi|391731130|gb|EIT59870.1| AMP-binding enzyme family protein [Yersinia pestis PY-102]
gi|391733565|gb|EIT61929.1| AMP-binding enzyme family protein [Yersinia pestis PY-103]
gi|391737148|gb|EIT65062.1| AMP-binding enzyme family protein [Yersinia pestis PY-113]
gi|411178288|gb|EKS48300.1| AMP-binding protein [Yersinia pestis INS]
Length = 601
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 120/417 (28%), Positives = 205/417 (49%), Gaps = 51/417 (12%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 118
DD+ T +YTSGTTG PKGVML ++N+ Q+ + D LS LP HV+ERA
Sbjct: 182 DDLFTLIYTSGTTGEPKGVMLDYRNMAAQLYLHDQRLTLTPQDVSLSFLPLSHVFERAWS 241
Query: 119 YFIFSRGIELMYTAVRN---LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 175
+++ G + +Y +RN ++ +Q +P M +VP YE ++S I ++ + +RV
Sbjct: 242 FYVMHTGAQNVY--IRNTDWVRSAMQAVKPTVMCAVPRFYEKVFSAINDKVALAKWHQRV 299
Query: 176 VARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKL 235
+ + FKR+ +G +P + WL + ++ LA++L
Sbjct: 300 LFHWAV--GCGERKFKRLQQG--------RP------LPWLSEQ--------MYTLADRL 335
Query: 236 VYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNV 294
V +K++ +G + + G L +I LF++AIGV ++ GYG+TE+ ++
Sbjct: 336 VLRKLRGVLGGRVRFLPAAGARLDDNIILFFQAIGVNIKYGYGMTETCATVSCWEEQNFR 395
Query: 295 LGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWL 354
GS+G P+ ++++ G++ ++VRG VM+GYFK P T +A EDGWL
Sbjct: 396 FGSIGKPLPGIDVRL-----------GAENEIQVRGPIVMRGYFKKPQETLEAFTEDGWL 444
Query: 355 NTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQI 414
TGD G + G L + R KD + S G+ + P +E + I Q+
Sbjct: 445 KTGDAGALDAQ----------GHLFITERLKDLMKTSGGKYIAPQMIEGTLGQDRFIEQV 494
Query: 415 VVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSK 471
+I ++ A+IVP E + A+ +++ + D EL + I ++ + K K
Sbjct: 495 AIIADTRKFVSALIVPSFESLEEYARSINLKYHDRLELLRHSHIVNMFEQRLKEIQK 551
>gi|456825826|gb|EMF74204.1| AMP-binding enzyme [Leptospira interrogans serovar Canicola str.
LT1962]
Length = 479
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 110/348 (31%), Positives = 182/348 (52%), Gaps = 17/348 (4%)
Query: 5 ILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATY 64
I+L+ +K ++ E+ F + DL + + + H + I +D+AT
Sbjct: 142 IILFDQKGTL-----EDTKSFEIILLNDLIEKGKTWIQNKGKDEFHKRGSAIREEDLATI 196
Query: 65 VYTSGTTGNPKGVMLTHKNLLHQIRSLY-----DIVPAENGDKFLSMLPPWHVYERACGY 119
VYTSGTTG PKGVMLTHKN++ + S ++ P D+ ++ LPPWH+ ER
Sbjct: 197 VYTSGTTGKPKGVMLTHKNIVFNVDSALQGEDLNVYPT---DRSMAYLPPWHIAERLVET 253
Query: 120 FIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARA 179
G +T++ +L DL +P ++SVP V+E+LY+ I ++ SS ++ + A
Sbjct: 254 VCIRAGGAEAFTSISSLSQDLADIKPTLLLSVPRVWESLYNKIHDKVRNSSPVQQALFGA 313
Query: 180 LIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKK 239
I+ Y +K + L + + S +L L + I +LW + +++ L + K
Sbjct: 314 FKEIAITY--YKHLSRLQNLEYSLTEQSTFASLWQKLISFWIVILLWIPNQISQ-LAFNK 370
Query: 240 IQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSV 298
I+ +G K +SG G+LP +ID F+ AIG+ + GYG+TE S + R +G++
Sbjct: 371 IKQGLGGELKFALSGAGALPQYIDTFFNAIGIPILEGYGMTELSGISTRRILGEITVGTL 430
Query: 299 GHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQ 346
G I +IK++D + NE+ G KGI +G VM+GY+K P K+
Sbjct: 431 GRCIPGVQIKLMDEKGNEITKPGIKGIAWHKGDHVMKGYYKEPEKRKR 478
>gi|319941889|ref|ZP_08016210.1| AMP-dependent synthetase and ligase [Sutterella wadsworthensis
3_1_45B]
gi|319804542|gb|EFW01412.1| AMP-dependent synthetase and ligase [Sutterella wadsworthensis
3_1_45B]
Length = 619
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 124/391 (31%), Positives = 192/391 (49%), Gaps = 46/391 (11%)
Query: 58 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERAC 117
S D+A VYTSGTTGNPKGVMLTH+N+L +R + + + LS LP H +ER
Sbjct: 189 STDLAALVYTSGTTGNPKGVMLTHRNVLSNLRGVLQSLQPYADETLLSFLPLSHTFERTA 248
Query: 118 GYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 175
Y++ G+ L + ++ L DDL+ +P ++SVP VY+ +Y ++ +
Sbjct: 249 SYYLAVGTGLTLAFNRSIATLADDLKSIRPTILMSVPRVYDMIYGKLRDGLAKKP----- 303
Query: 176 VARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKL 235
A +R F + A + + FC A +D L A + +K
Sbjct: 304 ---AYVRYLFNW-AVEVGWRRFCRENGLPIEPSGRAWLDPLVAGFL-----------DKK 348
Query: 236 VYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNV 294
+ K+++S G +SGG +L + + +GV + GYG+TE+SP+IA + N
Sbjct: 349 IGKQLRSVFGDRIHLYISGGAALNPAVAKVFLGLGVPIFQGYGMTETSPIIAVNKVGQNH 408
Query: 295 LGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWL 354
+VG +++ E+K+ G G + VRG VMQGY+ AT+ L +DGWL
Sbjct: 409 PSTVGPKLDNIEVKL-----------GDGGELLVRGPSVMQGYWHREEATRAILSDDGWL 457
Query: 355 NTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQI 414
+TGD+ I G + + GR K+ IV STGE V P +LE A L Q
Sbjct: 458 STGDVAEIYQD----------GCIRITGRIKEIIVTSTGEKVPPADLEAAVETDPLFAQT 507
Query: 415 VVIGQDQRRPG--AIIVPDKEEVLMAAKRLS 443
+ +G D+ A++ PD+ + L A +L
Sbjct: 508 LAVGDDRICIALVAVVNPDEWQRLCAELKLD 538
>gi|74318615|ref|YP_316355.1| long-chain fatty-acid-CoA ligase [Thiobacillus denitrificans ATCC
25259]
gi|74058110|gb|AAZ98550.1| long-chain fatty-acid-CoA ligase [Thiobacillus denitrificans ATCC
25259]
Length = 602
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 133/412 (32%), Positives = 196/412 (47%), Gaps = 53/412 (12%)
Query: 55 TIGSDDIATYVYTSGTTGNPKGVMLTHKNLL---HQIRSLYDIVPAENGDKFLSMLPPWH 111
++ D +A+ VYTSGTTG PKGVMLTH NLL + D P E FLS LP H
Sbjct: 177 SLAPDLLASIVYTSGTTGRPKGVMLTHDNLLWNAYYASHCADFGPHE---VFLSFLPLSH 233
Query: 112 VYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTS 169
ER GY++ G E+ Y ++ L DLQ +P +ISVP +YE +Y IQ +
Sbjct: 234 TLERTGGYYLAMLLGAEVAYARSIAQLAQDLQAIRPTVLISVPRIYERVYGRIQDGLEKK 293
Query: 170 SAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLH 229
A ARAL R++ + ++R R+Q + W +
Sbjct: 294 GAP----ARALFRLAV-HVGWRR------FERSQGRA---------YWHPELLLWPLLER 333
Query: 230 LLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARR 289
L+A + Q G + +SGG +L + + +GV V GYGLTE+SPV+ R
Sbjct: 334 LVARNVT----QKLGGRLRLAISGGAALSPEVARVFIGLGVPVYQGYGLTETSPVVCVNR 389
Query: 290 PTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALD 349
P N ++G P+ E++I D +E+L R VM+GY+K+ +AT+ +D
Sbjct: 390 PDSNSPATIGQPLPGVEVRIGD--NDELL---------TRSRCVMRGYWKDEAATRAMID 438
Query: 350 EDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSS 409
DGWL++GD + G + GR KD IVL+ GE V P ++E A L
Sbjct: 439 ADGWLHSGDQARV----------DADGHYTIIGRIKDIIVLNNGEKVPPTDMESAILLDP 488
Query: 410 LIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLL 461
L Q++V+G+ + A+ V ++ A L + A + L K L
Sbjct: 489 LFEQVMVVGEGRPYLAALTVLNEAHWEAFAASLHLDPAQPATLRDPKVTRAL 540
>gi|421352186|ref|ZP_15802551.1| AMP-binding enzyme family protein [Vibrio cholerae HE-25]
gi|395952631|gb|EJH63245.1| AMP-binding enzyme family protein [Vibrio cholerae HE-25]
Length = 601
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 138/466 (29%), Positives = 217/466 (46%), Gaps = 63/466 (13%)
Query: 31 IDLGRESRKAFSDSNDARKHYK--------YETIGSDDIATYVYTSGTTGNPKGVMLTHK 82
IDL + S D A+ H++ E DD+ T +YTSGTTG PKGVML ++
Sbjct: 142 IDLKQASCAMHWDEFVAQSHHQDRAPLNALIEQANYDDLFTLIYTSGTTGTPKGVMLDYR 201
Query: 83 NLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQ 141
N+ Q+ + D L LP HV+ERA ++ +G Y V ++++ L
Sbjct: 202 NIGAQLEGHDQRLNLTQEDVSLCFLPLSHVFERAWTAYVLYKGATNCYLQDVAHVREALA 261
Query: 142 RYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTR 201
+P M +VP YE ++S I +++ + R+V+ F + C +
Sbjct: 262 EVRPTVMCAVPRFYEKIFSAIHEKVAKAPLVRKVL--------FTWAVNMGAKMAVC-RQ 312
Query: 202 NQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMH 260
Q+QPS++ L H A+KLV K+++ +G + GG L
Sbjct: 313 QQRQPSWM---------------LKQSHQFADKLVLSKLRALLGGRINFMPCGGAKLDET 357
Query: 261 IDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA 320
I F+ AIG+ V++GYG+TE++ ++ C S+G + ++KI E NE+L
Sbjct: 358 IGRFFHAIGINVKLGYGMTETTATVSCWDDHCFNPDSIGLSMPGAQVKI--GENNEIL-- 413
Query: 321 GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVL 380
VRG VM+GY+K T ++ DE G+L TGD G I + G L +
Sbjct: 414 -------VRGPMVMRGYYKLDKETAESFDEHGFLKTGDAGHIDEN----------GNLFI 456
Query: 381 EGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAK 440
R K+ + S G+ + P +E A + I QI VI ++ A+IVP + + AK
Sbjct: 457 TDRIKELMKTSGGKYIAPQVIEGAIGKDHFIEQIAVIADTRKFVSALIVPCFDSLEEYAK 516
Query: 441 RLSIVHADASELSK--------EKTISLLYGELRKWTSKCSFQIGP 478
L+I + D EL K EK ++ L EL K+ F++ P
Sbjct: 517 DLNIKYHDRLELIKHSQVLEMFEKRVNELQKELAKFEQVKKFRLLP 562
>gi|269137982|ref|YP_003294682.1| AMP-binding enzyme-family protein [Edwardsiella tarda EIB202]
gi|387866716|ref|YP_005698185.1| long-chain-fatty-acid--CoA ligase [Edwardsiella tarda FL6-60]
gi|267983642|gb|ACY83471.1| putative AMP-binding enzyme-family protein [Edwardsiella tarda
EIB202]
gi|304558029|gb|ADM40693.1| Long-chain-fatty-acid--CoA ligase [Edwardsiella tarda FL6-60]
Length = 600
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 125/432 (28%), Positives = 208/432 (48%), Gaps = 53/432 (12%)
Query: 40 AFSDSND----ARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDI- 94
AF+ D AR + + DD+ T +YTSGTTG PKGVML +++L Q+ L+D
Sbjct: 157 AFAPGGDSASLARLAQRIDAASLDDLFTLIYTSGTTGEPKGVMLDYRSLAAQL-YLHDAR 215
Query: 95 VPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNL-KDDLQRYQPHYMISVPL 153
+ D L LP HV+ERA +++ G + +Y NL ++ +Q +P M +VP
Sbjct: 216 LNVGEQDVSLCFLPLSHVFERAWSFYVMHSGAQNVYLHDTNLVREAMQAVRPTMMCAVPR 275
Query: 154 VYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALI 213
YE ++S +Q ++ + RR + R + + +R L +P
Sbjct: 276 FYEKIFSAVQAKVAQAPWLRRQLFRWAV-----WCGEQRF-----LRERAARPQ------ 319
Query: 214 DWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKV 272
R++ A +H LA++LV K+++ +G + + G L H+ LF++A+G+ +
Sbjct: 320 ----GRLMTA----MHRLADRLVLAKLRAILGGRVRFLPAAGAKLDDHVILFFQALGLNI 371
Query: 273 QVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQ 332
+ GYG+TE+ ++ GS+G P+ E++I E NE+ +VRG
Sbjct: 372 KYGYGMTETCATVSCWEEQDFRFGSIGRPLPGVEVRI--GEENEI---------QVRGPI 420
Query: 333 VMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLST 392
VM+GYF P T Q DGWL TGD G + G L + R KD + S
Sbjct: 421 VMRGYFNKPQETAQTFTADGWLKTGDAGALDAQ----------GHLFITERLKDLMKTSN 470
Query: 393 GENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASEL 452
G+ + P +E R I Q+ VI ++ A+IVP + + A+ +++ + D +L
Sbjct: 471 GKYIAPQLVEGTLARDRFIEQVAVIADARKFVSALIVPCFDSLEEYARSINLKYHDRLDL 530
Query: 453 SKEKTISLLYGE 464
+ I L+ +
Sbjct: 531 LRHSHIVALFEQ 542
>gi|160885360|ref|ZP_02066363.1| hypothetical protein BACOVA_03359 [Bacteroides ovatus ATCC 8483]
gi|156108982|gb|EDO10727.1| AMP-binding enzyme [Bacteroides ovatus ATCC 8483]
Length = 604
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 131/443 (29%), Positives = 207/443 (46%), Gaps = 54/443 (12%)
Query: 54 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYD-IVPAENGDKFLSMLPPWHV 112
E DD+A +YTSGTTG PKGVML H L Q + D + + D ++ LP HV
Sbjct: 175 ERASYDDLANILYTSGTTGEPKGVMLHHSCYLEQFHTHDDRLTTMSDKDVSMNFLPLTHV 234
Query: 113 YERACGYFIFSRGIEL-MYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSA 171
+E+A Y +G+++ + +++ ++ +P M SVP +E +Y+G+Q++I ++
Sbjct: 235 FEKAWCYLCIHKGVQICINLRPADIQTTIKEIRPTLMCSVPRFWEKVYAGVQEKINETTG 294
Query: 172 ARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLL 231
++ + IR+ RI+ R K P + L +
Sbjct: 295 LKKALMLDAIRVG-------RIH-NLDYLRQGKTPPVMNQL---------------KYKF 331
Query: 232 AEKLVYKKIQSAIGISKAGV--SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARR 289
EK +Y ++ IGI + G ++P I+ F ++G+ + VGYGLTES+ ++
Sbjct: 332 YEKTIYSLLKKTIGIENGNFFPTAGAAVPDEINEFVHSVGINMVVGYGLTESTATVSCTL 391
Query: 290 PTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALD 349
P +GSVG + E+KI E NE+L +RG + +GY+K AT A++
Sbjct: 392 PVGYDIGSVGVVLPGIEVKI--GEGNEIL---------LRGKTITKGYYKKAEATAAAIE 440
Query: 350 EDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSS 409
DGW +TGD G+ G L L R KD S G+ V P LE +
Sbjct: 441 PDGWFHTGDAGYFK-----------NGQLFLTERIKDLFKTSNGKYVAPQALETKLVIDR 489
Query: 410 LIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWT 469
I QI +I ++ A+IVP V AK I + D +EL + I L+ R T
Sbjct: 490 YIDQIAIIADQRKFVSALIVPVYGFVKEYAKEKGIEYKDMTELLQHPKIVGLF-RARIDT 548
Query: 470 SKCSF----QIGPIHVVDEPFTV 488
+ F QI ++ EPF++
Sbjct: 549 LQQQFAHYEQIKRFTLLPEPFSM 571
>gi|270295471|ref|ZP_06201672.1| conserved hypothetical protein [Bacteroides sp. D20]
gi|270274718|gb|EFA20579.1| conserved hypothetical protein [Bacteroides sp. D20]
Length = 601
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 130/440 (29%), Positives = 205/440 (46%), Gaps = 56/440 (12%)
Query: 58 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSM--LPPWHVYER 115
DD+A +YTSGTTG PKGVML H N R ++DI D+ +SM LP HV+E+
Sbjct: 179 DDDLANILYTSGTTGEPKGVMLHHFNYREAFR-IHDIRLPFMTDRDVSMNFLPLTHVFEK 237
Query: 116 ACGYFIFSRGIEL-MYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARR 174
A Y RG+++ + ++++ ++ +P M SVP +E +Y+G+Q++I + R+
Sbjct: 238 AWTYLCIHRGVQVCINLRPQDIQTTIKEIRPTLMCSVPRFWEKVYAGVQEKISQETGLRK 297
Query: 175 VVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEK 234
+ I++ + R K P ++ L + EK
Sbjct: 298 AMMLDAIKVGRTH--------NIDYLRQGKTPPMMLHL---------------KYKFYEK 334
Query: 235 LVYKKIQSAIGISKAGV--SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTC 292
+Y ++ IGI + G ++P I F ++G+ + VGYGLTES+ ++
Sbjct: 335 TIYALLKKTIGIENGNFFPTAGAAVPDEICEFVHSVGINMVVGYGLTESTATVSCFLNEG 394
Query: 293 NVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDG 352
+GSVG + E+KI E NE+L +RG + GY+K P AT A+D +G
Sbjct: 395 YEIGSVGTVMPDVEVKI--GENNEIL---------LRGKTITTGYYKKPEATAAAIDRNG 443
Query: 353 WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIR 412
W +TGD G++ H L L R KD S G+ + P LE I
Sbjct: 444 WFHTGDAGYLKDSH-----------LYLTERIKDLFKTSNGKYISPQALETKLAIDRYID 492
Query: 413 QIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSKC 472
QI VI +++ A+IVP V AK I + + EL + I L+ R T +
Sbjct: 493 QIAVIADERKFVSALIVPVYGFVKDYAKEKGIAYNNMDELLQHSKIQALF-RARIDTLQQ 551
Query: 473 SF----QIGPIHVVDEPFTV 488
F Q+ ++ EPF++
Sbjct: 552 QFAHYEQVKRFTLLTEPFSM 571
>gi|427428169|ref|ZP_18918211.1| Long-chain-fatty-acid--CoA ligase [Caenispirillum salinarum AK4]
gi|425882870|gb|EKV31549.1| Long-chain-fatty-acid--CoA ligase [Caenispirillum salinarum AK4]
Length = 670
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 130/392 (33%), Positives = 194/392 (49%), Gaps = 61/392 (15%)
Query: 49 KHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAEN-GDK-FLSM 106
KH+ E +DD A +YTSGT G PKGVML+HKN+L +D++ GD+ FLS
Sbjct: 177 KHW--EGAEADDTACIIYTSGTGGAPKGVMLSHKNVLANCMGAFDVLEILGLGDEVFLSF 234
Query: 107 LPPWHVYERACG-YFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQK 164
LP H YE + G +F S G ++ Y + L ++ Q +P +VP ++E + + I +
Sbjct: 235 LPLSHSYEHSAGQFFPISIGAQIYYAEGLDKLSENFQEVRPTITTAVPRLFEFMRNRILR 294
Query: 165 QIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAI 224
+ + + + Y A + + +K + A+ +W+ R
Sbjct: 295 AMEKQTGTK---------VKLFYKAIE-----LGAKKYEKGLGPMEAMTNWVLGR----- 335
Query: 225 LWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSP 283
LV +K+ G KA VSGG L I LF+ A+ V + GYG TE++P
Sbjct: 336 ----------LVRRKVAQRFGGRLKALVSGGAPLNYDIGLFFMALDVPILQGYGQTEAAP 385
Query: 284 VIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSA 343
VI+ +RP L SVG P+ E++I AE E+L RG VM+GY+K P
Sbjct: 386 VISVQRPGSVRLESVGPPLKGVEVQI--AEDGEIL---------ARGPMVMRGYWKGPEQ 434
Query: 344 TKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEE 403
T++A+D +GWL+TGD+G H G +V+ R KD IV S G+N+ P +E
Sbjct: 435 TRKAIDAEGWLHTGDVG----HFDD------AGNIVITDRKKDIIVNSGGDNIAPARVEG 484
Query: 404 AALRSSLIRQIVVIGQDQRRPG--AIIVPDKE 433
I Q +V G RRP A++VPD +
Sbjct: 485 FLTLEPEIAQAMVYG--DRRPHLVALLVPDPD 514
>gi|256824009|ref|YP_003147969.1| AMP-forming long-chain acyl-CoA synthetase [Kytococcus sedentarius
DSM 20547]
gi|256687402|gb|ACV05204.1| AMP-forming long-chain acyl-CoA synthetase [Kytococcus sedentarius
DSM 20547]
Length = 606
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 126/434 (29%), Positives = 202/434 (46%), Gaps = 58/434 (13%)
Query: 28 DEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQ 87
D++I G E +A D + E +G + +AT +YTSGTTG PK ML H+ + +
Sbjct: 158 DQLIAGGAEVDQAEIDR-------RCEGLGRETLATLIYTSGTTGRPKACMLPHRAFIDE 210
Query: 88 IRSLYDIVPA--ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDDLQRYQP 145
+ + Y +P E+ L LP HV+ R + + G +T + + DL ++P
Sbjct: 211 VTAAYQGLPELFEDDSSTLLFLPLAHVFGRMVHFAVIGAGARTGHTDIARVAKDLPVFKP 270
Query: 146 HYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQ 205
++++VP V+E +Y + T ++ A A Q
Sbjct: 271 TFVLAVPRVFEKIYESAHLKA-TKGGKEKIFAAA----------------------TQTA 307
Query: 206 PSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKA-GVSGGGSLPMHIDLF 264
Y AL A + +L H L KLVY K+Q+A G +SGG +L + +
Sbjct: 308 IDYSKALD----AGRVPLVLRAKHKLFTKLVYGKVQAAFGGELTWAISGGAALGERLGHY 363
Query: 265 YEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKG 324
+ +GV + G+GLTE+S RP+ +G+VG P+ E ++ D +G
Sbjct: 364 FRGMGVNIMEGWGLTETSAAATVNRPSMQKIGTVGVPLPGFEARLSD-----------EG 412
Query: 325 IVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRA 384
++VRG V GY NP T + L EDGW +TGD+G I G L + GRA
Sbjct: 413 EIQVRGGHVFAGYENNPEETAKVLAEDGWFSTGDLGEIDDD----------GFLRIIGRA 462
Query: 385 KDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI 444
KD +V + G+NV P LE+ L+ + +V+G + A+I D+E++ K
Sbjct: 463 KDILVTAAGKNVAPGPLEDILRSHRLVSEAMVVGDGRPTVMALITLDEEQLPEWLKHHHR 522
Query: 445 VHADASELSKEKTI 458
ASEL++++ +
Sbjct: 523 EVVPASELTEDEQV 536
>gi|441516134|ref|ZP_20997885.1| long-chain fatty-acid--CoA ligase [Gordonia hirsuta DSM 44140 =
NBRC 16056]
gi|441457005|dbj|GAC55846.1| long-chain fatty-acid--CoA ligase [Gordonia hirsuta DSM 44140 =
NBRC 16056]
Length = 603
Score = 171 bits (433), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 126/419 (30%), Positives = 200/419 (47%), Gaps = 54/419 (12%)
Query: 24 VFSYDEIIDLG--RESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTH 81
VF+ D+ G + +A ++ DA + ++ +D AT +YTSGTTG PKGVML H
Sbjct: 145 VFTIDQTDGPGLIEQLTQAGTEVTDAELEARRRSLRADSPATLIYTSGTTGRPKGVMLYH 204
Query: 82 KNLLHQIRSLYDIVPAE---NGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLK 137
NLL ++ + D A+ G + L LP HV R G+ + YTA + NL
Sbjct: 205 SNLLGEVGGVLDSSLADLLGPGKRLLLFLPMAHVLARGVNLIAIEAGVAVGYTADIANLL 264
Query: 138 DDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGF 197
+ ++P ++SVP V+E +Y+ +++ + S + +I++
Sbjct: 265 PTFEVFRPSLILSVPRVFEKVYNSARQKAYDDSPVK-----------------GKIFDRA 307
Query: 198 CLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIG-ISKAGVSGGGS 256
T Q Y AL D + +L H L ++LVY K+ +A+G + +SGG
Sbjct: 308 ATTAIQ----YSKALDDG----SVGKVLQLRHKLYDRLVYSKLTAALGGQCELAISGGAP 359
Query: 257 LPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNE 316
L + F+ +G+ V GYGLTE++ I P +G+VG PI ++I
Sbjct: 360 LGARLGHFFRGVGIPVYEGYGLTETTAAITVNTPAEVRMGTVGRPIPGNAVRIA------ 413
Query: 317 VLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGG 376
G V + G+ V GY++N AT +A+ DGW +TGD+G S G
Sbjct: 414 -----PDGEVMLNGAVVFGGYWRNDEATAEAI-TDGWFHTGDLG----------SLDEDG 457
Query: 377 VLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 435
L + GR K+ IV + G+NV P LE+ +I Q +V+G + G +I D E++
Sbjct: 458 FLRITGRKKEIIVTAGGKNVSPAPLEDIMRAHPMISQAMVVGDKEPFIGTLITLDAEQI 516
>gi|365091990|ref|ZP_09329241.1| AMP-dependent synthetase and ligase [Acidovorax sp. NO-1]
gi|363415727|gb|EHL22853.1| AMP-dependent synthetase and ligase [Acidovorax sp. NO-1]
Length = 619
Score = 171 bits (433), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 127/454 (27%), Positives = 214/454 (47%), Gaps = 43/454 (9%)
Query: 41 FSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENG 100
S + A + G DD+A VYTSGTTG PKGVMLTH+N++ ++++ + +
Sbjct: 172 LSGAEHAAALRTWTPPGEDDLAAIVYTSGTTGKPKGVMLTHRNVVSDVKAVLERIAPTVD 231
Query: 101 DKFLSMLPPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETL 158
D FLS LP H +ER GY++ + G + Y +V L +DL+ +P ++SVP +YE +
Sbjct: 232 DVFLSFLPLSHTFERTGGYYLPIAAGSCVAYARSVAQLAEDLKTIRPTVLVSVPRIYERI 291
Query: 159 YSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWA 218
++ + +++ + ++ A + + FC + P+ + W
Sbjct: 292 HAKLLEKLSPTP----------WKVQLYEAAQNKGWARFCAAQGLAAPTPDASSQAAGW- 340
Query: 219 RIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYG 277
+ A+ WP + + LV K + + G + VSGG L I + +G+ + GYG
Sbjct: 341 --MAALPWP---VLQALVAKPLLAQFGGRVRVAVSGGAPLSPTIAKCFLGLGLPLIQGYG 395
Query: 278 LTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGY 337
+TE++PV++ N VG + E++I G ++VRG VM+GY
Sbjct: 396 MTETAPVVSVNALDDNDPACVGKALPGVEVRI-----------GDNHELQVRGPIVMKGY 444
Query: 338 FKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVE 397
+K T + L DGWL TGD ++ G + ++GR K+ IV STGE +
Sbjct: 445 WKRLEDTARILSTDGWLGTGD-----------QADIVNGRIYIKGRIKEIIVTSTGEKIP 493
Query: 398 PLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKT 457
P +LE A L L+ Q V+G+++ + V + E A L + A LS
Sbjct: 494 PGDLELALLADPLLEQAFVVGENRPFIACVAVLNPSEWQRLAADLGLNPQAADSLSHPSV 553
Query: 458 ISLLYGELRKWTSKCSFQIGP--IHVVDEPFTVN 489
+ + K T+ + P +H+ P+T+
Sbjct: 554 HRAVLARIEKNTASFARYAVPRTVHLTLTPWTIE 587
>gi|453066970|ref|ZP_21970260.1| long-chain fatty-acid--CoA ligase [Rhodococcus qingshengii BKS
20-40]
gi|452767357|gb|EME25597.1| long-chain fatty-acid--CoA ligase [Rhodococcus qingshengii BKS
20-40]
Length = 597
Score = 171 bits (433), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 121/403 (30%), Positives = 193/403 (47%), Gaps = 64/403 (15%)
Query: 42 SDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYD------IV 95
+D +DA + I +DD+A+ VYTSGTTG PKG +LTH+N L ++R + V
Sbjct: 158 ADVDDAELKKRLAGIKADDLASLVYTSGTTGRPKGCILTHRNFLSEVRGILTASIGKVAV 217
Query: 96 PAENGDKFLSMLPPWHVYERACGYFIFSRGI-ELMYTAVRNLKDDLQRYQPHYMISVPLV 154
P G++ L+ LP HV RA F G + ++ + +RY+P+ ++ VP V
Sbjct: 218 P---GNRVLTFLPLAHVLARAVSLATFEAGASQAHWSDFATITTQFERYKPNTILGVPRV 274
Query: 155 YETLYSGIQKQIFTSSAARRVVARALIR---ISFAYTAFKRIYEGFCLTRNQKQPSYLVA 211
+E + G AAR+ + I +FA T K E ++ PS
Sbjct: 275 FEKVRDG---------AARKAESGGKIPGAIFAFAETTAKEYSEAL----DKGGPSL--- 318
Query: 212 LIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISK-AGVSGGGSLPMHIDLFYEAIGV 270
IL H +A+KLVY K++ A+G +SGGG+L + F+ +GV
Sbjct: 319 ------------ILKAKHAVADKLVYSKLREALGGECWFAISGGGALTPELGHFFRGLGV 366
Query: 271 KVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRG 330
+ GYGLTE++ P +G+VG P+ ++I + G +++ G
Sbjct: 367 PIYEGYGLTETTAAHCVNVPGAQKIGTVGQPMGGNGVRIAE-----------DGEIELNG 415
Query: 331 SQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVL 390
V +GY+KN AT++ +GW+ TGD+G + G L + GR KD +V
Sbjct: 416 GVVFKGYWKNDKATEETF-VNGWMRTGDLGEL----------DSDGYLSITGRKKDLLVT 464
Query: 391 STGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 433
+ G+NV P +E+ S++ Q VV+G + A++ D E
Sbjct: 465 AGGKNVSPGPMEDRIRSHSIVSQAVVVGDGKTYITALLTVDPE 507
>gi|339501423|ref|YP_004699458.1| Long-chain-fatty-acid--CoA ligase [Spirochaeta caldaria DSM 7334]
gi|338835772|gb|AEJ20950.1| Long-chain-fatty-acid--CoA ligase [Spirochaeta caldaria DSM 7334]
Length = 641
Score = 171 bits (433), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 124/390 (31%), Positives = 198/390 (50%), Gaps = 47/390 (12%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNL-LHQIRSLYDIVPAENGDKFLSMLPPWHVYERAC 117
D + T YTSGTTGNPKG+MLTHKN ++ + S+ E G + +LP H + +
Sbjct: 185 DRVVTISYTSGTTGNPKGIMLTHKNYYINSLDSVNIFKVPETGYRNFVILPVDHSFAQTV 244
Query: 118 G-YFIFSRGIELMY--------TAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFT 168
G + RGIEL + +RN+ +++ +P ++++VP + +Q +I
Sbjct: 245 GIHASIQRGIELWFVDSRGGGMAILRNIPINMKEAEPVFLMTVPALSGNFMKKMQAEIDK 304
Query: 169 SSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPL 228
+ + I+ +Y +G RN K ++L AL+ +PL
Sbjct: 305 RGGIIKFLFDTGIKAGISYWG-----DGSFPERNLK--TFLNALV-----------YFPL 346
Query: 229 HLLAEKLVYKKIQSAIGISKAG--VSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIA 286
+KLV K+++ + +A GG S + FY A+G+ + GYG+TE+SPVI+
Sbjct: 347 ----KKLVLDKVKTEVFGKRAQFFTGGGASFDIGQQRFYRALGMPLYQGYGMTEASPVIS 402
Query: 287 ARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQ 346
LG+ G ++H EI+I+ + P G KG + VRG VM+GYFKNP AT++
Sbjct: 403 TNIEGHTKLGTSGIALDHVEIRIIRDDGTFAEP-GEKGEICVRGPNVMKGYFKNPEATRE 461
Query: 347 ALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAAL 406
L DGWL+TGD+GW+ G L + GRAK ++ + GE P +EEA
Sbjct: 462 TL-VDGWLHTGDLGWLDKD----------GYLTVAGRAKALLISADGEKYSPEGIEEAIA 510
Query: 407 RSS-LIRQIVVIGQDQRRPGAIIVPDKEEV 435
S+ ++ Q++V +R A+I + E+V
Sbjct: 511 NSAKVVNQVMVWNDHKRFTCALITLEDEQV 540
>gi|448330677|ref|ZP_21519956.1| AMP-dependent synthetase and ligase [Natrinema versiforme JCM
10478]
gi|445611181|gb|ELY64941.1| AMP-dependent synthetase and ligase [Natrinema versiforme JCM
10478]
Length = 652
Score = 171 bits (433), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 124/398 (31%), Positives = 195/398 (48%), Gaps = 60/398 (15%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNL---LHQIRSLYDIVPAENGDK--------FLSML 107
DD+A+ +YTSGTTG PKGV L+H+N ++ IR + P ++ D +S L
Sbjct: 206 DDLASLIYTSGTTGQPKGVQLSHRNFRSNVNGIRKRFAPRPDKDDDVPVLDEESVAMSYL 265
Query: 108 PPWHVYERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQ 165
P HV+ER G+F+ F+ G + Y + L++D +P SVP VYE +Y I+++
Sbjct: 266 PLAHVFERTAGHFVLFASGACVAYAESPDTLQEDFSLVEPTTATSVPRVYEKIYDSIREE 325
Query: 166 IFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAIL 225
S+ + R+ A +++ A IL
Sbjct: 326 ASGSAVSERIFEWATD-----------------------------VGVEYQLADSPGPIL 356
Query: 226 WPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPV 284
+A+KLV+ ++ A+G +SGGGSL + Y A+G+ + GYGLTE+SPV
Sbjct: 357 SAKQAVADKLVFSSVREALGGEIDLLISGGGSLSPELCRLYHAMGLPIFEGYGLTETSPV 416
Query: 285 IAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA---GSKGIVKVRGSQVMQGYFKNP 341
++ +G++G P+ + ++K+ + ++ A G G + V G V +GY+ P
Sbjct: 417 VSTNPQDAVKVGTIGPPLANVDVKVDETVADQEAFADDPGEVGELLVNGPNVTEGYWNRP 476
Query: 342 SATKQALD--EDG--WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVE 397
AT+ A EDG W TGDI + P G L R K IVLSTG+NV
Sbjct: 477 GATRGAFTEAEDGTQWFRTGDIIHLRPD----------GYLEFRDRLKQIIVLSTGKNVA 526
Query: 398 PLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 435
P LE+A S ++ Q +V+G ++ GA++VP+ V
Sbjct: 527 PGPLEDAFAASEIVEQAMVVGDGEKFIGALLVPNTNHV 564
>gi|423304813|ref|ZP_17282812.1| hypothetical protein HMPREF1072_01752 [Bacteroides uniformis
CL03T00C23]
gi|423310073|ref|ZP_17288057.1| hypothetical protein HMPREF1073_02807 [Bacteroides uniformis
CL03T12C37]
gi|392682713|gb|EIY76055.1| hypothetical protein HMPREF1073_02807 [Bacteroides uniformis
CL03T12C37]
gi|392683477|gb|EIY76812.1| hypothetical protein HMPREF1072_01752 [Bacteroides uniformis
CL03T00C23]
Length = 601
Score = 171 bits (433), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 130/440 (29%), Positives = 205/440 (46%), Gaps = 56/440 (12%)
Query: 58 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSM--LPPWHVYER 115
DD+A +YTSGTTG PKGVML H N R ++DI D+ +SM LP HV+E+
Sbjct: 179 DDDLANILYTSGTTGEPKGVMLHHFNYREAFR-IHDIRLPFMTDQDVSMNFLPLTHVFEK 237
Query: 116 ACGYFIFSRGIEL-MYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARR 174
A Y RG+++ + ++++ ++ +P M SVP +E +Y+G+Q++I + R+
Sbjct: 238 AWTYLCIHRGVQVCINLRPQDIQTTIKEIRPTLMCSVPRFWEKVYAGVQEKISQETGLRK 297
Query: 175 VVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEK 234
+ I++ + R K P ++ L + EK
Sbjct: 298 AMMLDAIKVGRTH--------NIDYLRQGKTPPMMLHL---------------KYKFYEK 334
Query: 235 LVYKKIQSAIGISKAGV--SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTC 292
+Y ++ IGI + G ++P I F ++G+ + VGYGLTES+ ++
Sbjct: 335 TIYALLKKTIGIENGNFFPTAGAAVPDEICEFVHSVGINMVVGYGLTESTATVSCFLNEG 394
Query: 293 NVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDG 352
+GSVG + E+KI E NE+L +RG + GY+K P AT A+D +G
Sbjct: 395 YEIGSVGTVMPDVEVKI--GENNEIL---------LRGKTITTGYYKKPEATAAAIDRNG 443
Query: 353 WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIR 412
W +TGD G++ H L L R KD S G+ + P LE I
Sbjct: 444 WFHTGDAGYLKDSH-----------LYLTERIKDLFKTSNGKYISPQALETKLAIDRYID 492
Query: 413 QIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSKC 472
QI VI +++ A+IVP V AK I + + EL + I L+ R T +
Sbjct: 493 QIAVIADERKFVSALIVPVYGFVKDYAKEKGIAYNNMDELLQHSKIQALF-RARIDTLQQ 551
Query: 473 SF----QIGPIHVVDEPFTV 488
F Q+ ++ EPF++
Sbjct: 552 QFAHYEQVKRFTLLTEPFSM 571
>gi|323492601|ref|ZP_08097746.1| long-chain-fatty-acid--CoA ligase [Vibrio brasiliensis LMG 20546]
gi|323313159|gb|EGA66278.1| long-chain-fatty-acid--CoA ligase [Vibrio brasiliensis LMG 20546]
Length = 602
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 129/437 (29%), Positives = 203/437 (46%), Gaps = 55/437 (12%)
Query: 52 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWH 111
+ E DD+ T +YTSGTTG PKGVML + N+ Q+ + D L LP H
Sbjct: 171 RLEQANFDDLLTLIYTSGTTGQPKGVMLDYANIAAQLEGHDQRLSLSESDVSLCFLPLSH 230
Query: 112 VYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSS 170
V+ERA +++ +G Y +++ L +P M +VP YE ++S I +++ +
Sbjct: 231 VFERAWTFYVLYKGATNCYLQDTMQVREALSEVRPTVMCAVPRFYEKIFSAIHEKVAKAP 290
Query: 171 AARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHL 230
R+V+ F + C + + PS +L +
Sbjct: 291 FIRKVL--------FTWAVNMGAKMALC-HQEGRNPS---------------VMLKKSYA 326
Query: 231 LAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARR 289
LA+KLV K+++ +G + GG L I F+ AIG+ V++GYG+TE++ ++
Sbjct: 327 LADKLVLSKLRALLGGQINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTATVSCWD 386
Query: 290 PTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALD 349
C S+G + ++KI D NE+L VRG VM+GY+K P T + D
Sbjct: 387 DKCFNPDSIGMSMPGAQVKIGD--NNEIL---------VRGPMVMRGYYKMPEETAKTFD 435
Query: 350 EDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSS 409
E G+L TGD G I + G L + R K+ + S G+ + P +E A +
Sbjct: 436 EHGFLKTGDAGHIDEN----------GNLFITDRIKELMKTSNGKYIAPQMIEGAIGKDH 485
Query: 410 LIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLL 461
I QI VI ++ A+IVP + + AK L+I + D EL K EK ++ L
Sbjct: 486 FIEQIAVIADTRKFVSALIVPCYDSLEEYAKELNIKYHDRVELIKHHQIVEMLEKRVNDL 545
Query: 462 YGELRKWTSKCSFQIGP 478
EL K+ F++ P
Sbjct: 546 QKELAKFEQVKKFKLLP 562
>gi|428207898|ref|YP_007092251.1| AMP-dependent synthetase and ligase [Chroococcidiopsis thermalis
PCC 7203]
gi|428009819|gb|AFY88382.1| AMP-dependent synthetase and ligase [Chroococcidiopsis thermalis
PCC 7203]
Length = 730
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 148/488 (30%), Positives = 218/488 (44%), Gaps = 71/488 (14%)
Query: 20 EEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVML 79
+ + +FS EI G+ + +D R+ ++ ++D+AT +Y G TG P+GVML
Sbjct: 167 QSLQIFSLAEIRQRGQ------AQMSDERQQQLRASLTANDLATIIYIPGATGKPQGVML 220
Query: 80 THKNLLHQIRSLYDIVP-AENGDK--FLSMLPPWHVYERACGYFIFSRGIELMYTAVRNL 136
TH+NL +++ +P E G K LS LP HV+ R Y + G + +T +
Sbjct: 221 THENLSANALAMFSGIPDLELGAKEVVLSFLPLTHVFARVFFYGHMNYGHSVYFTTPNRV 280
Query: 137 KDDLQRYQPHYMISVPLVYETLYSGIQK---QIFTSSAARRVVARALIRI-SFAYTAFKR 192
L+ QP +VPL+ E +Y I + Q A+ V L R +FA F++
Sbjct: 281 MKHLKEVQPTIFATVPLLLEKIYQRILETGSQTPQPETAKSVKYDLLPRFRTFAAQMFQK 340
Query: 193 IYEG----FCLTRNQ-------KQPSYLVALIDWL------------WARIICAIL---- 225
E F L+ + K P + +L W WA +
Sbjct: 341 KQETPQQKFRLSSLRWLPPTQFKLPHWQASLTAWKSLQTEQTQRLVDWAIALAQQYELGR 400
Query: 226 -------WPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYG 277
W L L A +LV+ + +S G K + GG +L I + A V + GYG
Sbjct: 401 SPSGKYDWMLKL-ANRLVFSRWRSVFGGHLKYAICGGAALKAEIANLFAAARVTILQGYG 459
Query: 278 LTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGY 337
LTE+S +A R + N G+VG P+ EI I S G + VRG V QGY
Sbjct: 460 LTETSSAVACNRGSFNRAGTVGVPLPGIEIAI-----------ASDGEILVRGPYVTQGY 508
Query: 338 FKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVE 397
+KNP AT+QA+D +GW +TGDIG G L + G K LSTG+ V
Sbjct: 509 YKNPEATQQAIDSEGWFHTGDIGEFT----------ADGFLKIVGLKKSHFKLSTGKYVT 558
Query: 398 PLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKT 457
P LE +S L+ + V +G +++ +I PD + A+ L + DA EL
Sbjct: 559 PQPLEHKLEQSPLVAKAVAVGAERKFCAMLIFPDFNNLRQQAQLLELDLPDA-ELLNHPC 617
Query: 458 ISLLYGEL 465
I LY L
Sbjct: 618 ILALYQAL 625
>gi|325103741|ref|YP_004273395.1| AMP-dependent synthetase and ligase [Pedobacter saltans DSM 12145]
gi|324972589|gb|ADY51573.1| AMP-dependent synthetase and ligase [Pedobacter saltans DSM 12145]
Length = 640
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 117/396 (29%), Positives = 190/396 (47%), Gaps = 64/396 (16%)
Query: 60 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPA-ENGDKFLSMLPPWHVYERACG 118
D++ +YTSGTTG PKGVMLTH+N + +R + +P E D FLS LP HV+ER
Sbjct: 194 DLSALIYTSGTTGTPKGVMLTHRNFVENVRECLNQIPVIEPDDIFLSFLPLSHVFERTAT 253
Query: 119 YFI---------FSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTS 169
Y++ F++ +EL L +++ +P + VP + E ++ K ++
Sbjct: 254 YYVCCAMGSQIAFAQSLEL-------LAKNMEEVKPMVISCVPRLLEKIHDKAIKSGTST 306
Query: 170 SAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLH 229
A+ + I + K K+P +++ +
Sbjct: 307 GGAKAKIFLWAFDIGQKHRTIKEA---------GKKPGLKLSI---------------QY 342
Query: 230 LLAEKLVYKKI-QSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAAR 288
+A+KLV+ KI + G K +SGG +LP ++ F+ +G+K+ G+GLTE+SPV++
Sbjct: 343 AIAQKLVFSKIIEKTGGRLKFMISGGAALPKNVGEFFGNLGIKILEGFGLTETSPVMSVT 402
Query: 289 RPTCNVLGSVGHPINHTEIKIVDAETNEVLP-----------AGSKGIVKVRGSQVMQGY 337
V G+VG I E+ + D ET E + +G + VRG VM+GY
Sbjct: 403 EFNRQVYGTVGRVIPGIEVGVQDVETKEFVTIQTYSSFNPNFTSEEGEIVVRGHCVMKGY 462
Query: 338 FKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVE 397
+ P T Q +D +GW +TGD+G R G L + R K+ +V + G+N+
Sbjct: 463 WNKPEETAQVIDSNGWFHTGDVG-----------RFYLGNLQITDRIKNMLVNAFGKNIY 511
Query: 398 PLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 433
P +E L+S I + +IG + AII+P +E
Sbjct: 512 PTPVENTYLKSPKIEGVFLIGDKREYVTAIIIPARE 547
>gi|291513979|emb|CBK63189.1| Long-chain acyl-CoA synthetases (AMP-forming) [Alistipes shahii WAL
8301]
Length = 635
Score = 171 bits (432), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 136/459 (29%), Positives = 223/459 (48%), Gaps = 68/459 (14%)
Query: 54 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNL---LHQIRSLYDIVPAENGDKFLSMLPPW 110
+ I +DD AT YTSGTT +PKGV+LTH+N + Q S DI P + L +LP
Sbjct: 170 QAIRNDDYATITYTSGTTSDPKGVILTHRNYTANVEQALSRVDIPPH---FRTLIILPLD 226
Query: 111 HVYERACGYFIF----------SRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYS 160
H + G++I G M T ++N+ +++ QPH+++SVP + +
Sbjct: 227 HCFAHVVGFYIMIACGASVATVQIGATPMET-LKNIPQNIREVQPHFLLSVPALAKNFRK 285
Query: 161 GIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARI 220
I+ I + +R ++AY + +G+ W RI
Sbjct: 286 NIESSIRAKGRFTEALFNLALRTAYAYNS-----DGYGRGSG--------------W-RI 325
Query: 221 ICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSL-PMHIDLFYEAIGVKVQVGYGLT 279
+ A P+ + + L+++K++ A G GGG+L + F+ AIG+ + GYGL+
Sbjct: 326 VLA---PVVGIFDALLFRKVRQAFGGHLEFFVGGGALLDAELQRFFYAIGIPMFQGYGLS 382
Query: 280 ESSPVIAARRPT--CNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGY 337
E++PVI+ P + GS G + ++KI+D E EV P G KG + VRG VM GY
Sbjct: 383 EATPVISTNSPKHHWHRFGSSGKILIPLDLKILDEEGREV-PRGQKGEIVVRGENVMAGY 441
Query: 338 FKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVE 397
+KNP AT + + DGWL+TGD+G+++ L + GR K ++ S GE
Sbjct: 442 WKNPGATAETV-RDGWLHTGDMGYVSEDD----------FLYVLGRFKSLLIASDGEKYS 490
Query: 398 PLELEEAAL-RSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEK 456
P +EEA + +S I QI+V GAI+VP++E + + A+ + ++ E
Sbjct: 491 PEGMEEAIVDKSPYIDQIIVHNNQSPFTGAIVVPNREALRRELEARRTPEAERANVAAE- 549
Query: 457 TISLLYGELRKWTSKCSFQ--------IGPIHVVDEPFT 487
+L E+ ++ + ++ + +VDE FT
Sbjct: 550 ---ILGAEIDRYRAGGTYAGEFPERWLPAGLAIVDEAFT 585
>gi|218131878|ref|ZP_03460682.1| hypothetical protein BACEGG_03500 [Bacteroides eggerthii DSM 20697]
gi|217986181|gb|EEC52520.1| AMP-binding enzyme [Bacteroides eggerthii DSM 20697]
Length = 593
Score = 171 bits (432), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 140/475 (29%), Positives = 218/475 (45%), Gaps = 70/475 (14%)
Query: 27 YDEIIDLGRE-SRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLL 85
YDE + LG++ + AR +D+A +YTSGTTG PKGVML H N
Sbjct: 146 YDEFLALGKDLPHNNVVEERTARA-------SDEDLANILYTSGTTGEPKGVMLHHFNYR 198
Query: 86 HQIRSLYDIVPAENGDKFLSM--LPPWHVYERACGYFIFSRGIEL-MYTAVRNLKDDLQR 142
IR ++DI DK +SM LP HV+E+A Y RG+++ + +++ ++
Sbjct: 199 EAIR-IHDIRLTAMTDKDVSMNFLPLTHVFEKAWTYLCIHRGVQVCINLRPADIQTTIKE 257
Query: 143 YQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRN 202
+P M SVP +E +Y+G+Q++I + R+ + I++ +
Sbjct: 258 IRPTLMCSVPRFWEKVYAGVQEKIAQETGLRKAMMLDAIKVGKMHN-------------- 303
Query: 203 QKQPSYLVALIDWLWARIICAILWPLHL---LAEKLVYKKIQSAIGISKAGV--SGGGSL 257
ID+L +L LHL EK +Y ++ IGI + G ++
Sbjct: 304 ----------IDYLRVGKTPPLL--LHLKYKFYEKTIYALLKKTIGIENGNFFPTAGAAV 351
Query: 258 PMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEV 317
P I F ++G+ + VGYGLTES+ ++ +GSVG + E+KI E NE+
Sbjct: 352 PDEICEFVHSVGINMIVGYGLTESTATVSCFPDKGYEIGSVGTLMPDVEVKI--GENNEI 409
Query: 318 LPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGV 377
L +RG + GY++ P AT A+D+DGW +TGD G + H
Sbjct: 410 L---------LRGKTITTGYYRKPEATADAIDKDGWFHTGDAGHLKDGH----------- 449
Query: 378 LVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLM 437
L L R KD S G+ V P LE I QI VI ++ A+IVP V
Sbjct: 450 LYLTERIKDLFKTSNGKYVSPQALETKLAIDRYIDQIAVIADQRKFVSALIVPVYGFVKD 509
Query: 438 AAKRLSIVHADASELSKEKTISLLYGELRKWTSKCSF----QIGPIHVVDEPFTV 488
AK + + D ++L + + L+ R T + F Q+ ++ EPF++
Sbjct: 510 YAKEKGLEYKDMADLLQHPKVQALF-RARIDTLQQQFAHYEQVKRFTLLPEPFSM 563
>gi|330825047|ref|YP_004388350.1| long-chain-fatty-acid--CoA ligase [Alicycliphilus denitrificans
K601]
gi|329310419|gb|AEB84834.1| Long-chain-fatty-acid--CoA ligase [Alicycliphilus denitrificans
K601]
Length = 611
Score = 171 bits (432), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 135/437 (30%), Positives = 206/437 (47%), Gaps = 48/437 (10%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRS-LYDIVPAENGDKFLSMLPPWHVYERAC 117
+D+A VYTSGTTG PKGVMLTH N++ +++ L IVP + D FLS LP H +ER
Sbjct: 187 EDLAAIVYTSGTTGKPKGVMLTHANVIADVKAVLQRIVPTPD-DVFLSFLPLSHTFERTG 245
Query: 118 GYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 175
GY++ + G + Y +V L DD+ +P ++SVP +YE +++ + + + +S
Sbjct: 246 GYYLPVASGSCVAYARSVAQLADDMLTVRPTVLVSVPRIYERVHAKLIETLSSSP----- 300
Query: 176 VARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKL 235
++ A + FC + P A W R A+ WP L L
Sbjct: 301 -----WKMQLFQAAQAVGWRRFCAAQRLPAPQDDGA---GSWMR---ALPWP---LLRAL 346
Query: 236 VYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNV 294
V + + + G + VSGG LP I + +G+ + GYG+TE++PV++ N
Sbjct: 347 VARPLLARFGGRVRVAVSGGAPLPPAIAQCFLGLGLPLVQGYGMTETTPVVSVNALDDND 406
Query: 295 LGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWL 354
+VG + E++I G ++VRG VM+GY+K P T +A+ E GWL
Sbjct: 407 PSTVGRALPGVEVRI-----------GENRELQVRGPIVMKGYWKRPEDTARAIGEGGWL 455
Query: 355 NTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQI 414
TGD I GR R + GR K+ IV STGE V P +LE A L Q
Sbjct: 456 GTGDQAEIV----DGRIR-------ILGRIKEIIVTSTGEKVPPADLELAITADPLFEQA 504
Query: 415 VVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSKCSF 474
V+G+ + + EE A +L + D + L+ + K +
Sbjct: 505 FVVGEQRPFIACVAAVQAEEWRQLAGQLGLDPDDPASLAHPSATRAALARIEKLAAGFPR 564
Query: 475 QIGP--IHVVDEPFTVN 489
P +H+V EP+T+
Sbjct: 565 YAVPRAVHLVREPWTIE 581
>gi|317474513|ref|ZP_07933787.1| AMP-binding enzyme [Bacteroides eggerthii 1_2_48FAA]
gi|316909194|gb|EFV30874.1| AMP-binding enzyme [Bacteroides eggerthii 1_2_48FAA]
Length = 601
Score = 171 bits (432), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 140/475 (29%), Positives = 218/475 (45%), Gaps = 70/475 (14%)
Query: 27 YDEIIDLGRE-SRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLL 85
YDE + LG++ + AR +D+A +YTSGTTG PKGVML H N
Sbjct: 154 YDEFLALGKDLPHNNVVEERTARA-------SDEDLANILYTSGTTGEPKGVMLHHFNYR 206
Query: 86 HQIRSLYDIVPAENGDKFLSM--LPPWHVYERACGYFIFSRGIEL-MYTAVRNLKDDLQR 142
IR ++DI DK +SM LP HV+E+A Y RG+++ + +++ ++
Sbjct: 207 EAIR-IHDIRLTAMTDKDVSMNFLPLTHVFEKAWTYLCIHRGVQVCINLRPADIQTTIKE 265
Query: 143 YQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRN 202
+P M SVP +E +Y+G+Q++I + R+ + I++ +
Sbjct: 266 IRPTLMCSVPRFWEKVYAGVQEKIAQETGLRKAMMLDAIKVGKMHN-------------- 311
Query: 203 QKQPSYLVALIDWLWARIICAILWPLHL---LAEKLVYKKIQSAIGISKAGV--SGGGSL 257
ID+L +L LHL EK +Y ++ IGI + G ++
Sbjct: 312 ----------IDYLRVGKTPPLL--LHLKYKFYEKTIYALLKKTIGIENGNFFPTAGAAV 359
Query: 258 PMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEV 317
P I F ++G+ + VGYGLTES+ ++ +GSVG + E+KI E NE+
Sbjct: 360 PDEICEFVHSVGINMIVGYGLTESTATVSCFPDKGYEIGSVGTLMPDVEVKI--GENNEI 417
Query: 318 LPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGV 377
L +RG + GY++ P AT A+D+DGW +TGD G + H
Sbjct: 418 L---------LRGKTITTGYYRKPEATADAIDKDGWFHTGDAGHLKDGH----------- 457
Query: 378 LVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLM 437
L L R KD S G+ V P LE I QI VI ++ A+IVP V
Sbjct: 458 LYLTERIKDLFKTSNGKYVSPQALETKLAIDRYIDQIAVIADQRKFVSALIVPVYGFVKD 517
Query: 438 AAKRLSIVHADASELSKEKTISLLYGELRKWTSKCSF----QIGPIHVVDEPFTV 488
AK + + D ++L + + L+ R T + F Q+ ++ EPF++
Sbjct: 518 YAKEKGLEYKDMADLLQHPKVQALF-RARIDTLQQQFAHYEQVKRFTLLPEPFSM 571
>gi|319762967|ref|YP_004126904.1| AMP-dependent synthetase/ligase [Alicycliphilus denitrificans BC]
gi|317117528|gb|ADV00017.1| AMP-dependent synthetase and ligase [Alicycliphilus denitrificans
BC]
Length = 611
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 135/437 (30%), Positives = 206/437 (47%), Gaps = 48/437 (10%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRS-LYDIVPAENGDKFLSMLPPWHVYERAC 117
+D+A VYTSGTTG PKGVMLTH N++ +++ L IVP + D FLS LP H +ER
Sbjct: 187 EDLAAIVYTSGTTGKPKGVMLTHANVIADVKAVLQRIVPTPD-DVFLSFLPLSHTFERTG 245
Query: 118 GYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 175
GY++ + G + Y +V L DD+ +P ++SVP +YE +++ + + + +S
Sbjct: 246 GYYLPVASGSCVAYARSVAQLADDMLTVRPTVLVSVPRIYERVHAKLIETLSSSP----- 300
Query: 176 VARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKL 235
++ A + FC + P A W R A+ WP L L
Sbjct: 301 -----WKMQLFQAAQAVGWRRFCAAQRLPAPQDDGA---GSWMR---ALPWP---LLRAL 346
Query: 236 VYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNV 294
V + + + G + VSGG LP I + +G+ + GYG+TE++PV++ N
Sbjct: 347 VARPLLARFGGRVRVAVSGGAPLPPAIAQCFLGLGLPLVQGYGMTETTPVVSVNALDDND 406
Query: 295 LGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWL 354
+VG + E++I G ++VRG VM+GY+K P T +A+ E GWL
Sbjct: 407 PSTVGRALPGVEVRI-----------GENRELQVRGPIVMKGYWKRPEDTARAIGEGGWL 455
Query: 355 NTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQI 414
TGD I GR R + GR K+ IV STGE V P +LE A L Q
Sbjct: 456 GTGDQAEIV----DGRIR-------ILGRIKEIIVTSTGEKVPPADLELAITADPLFEQA 504
Query: 415 VVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSKCSF 474
V+G+ + + EE A +L + D + L+ + K +
Sbjct: 505 FVVGEQRPFIACVAAVQAEEWRQLAGQLGLDPDDPASLAHPSATRAALARIEKLAAGFPR 564
Query: 475 QIGP--IHVVDEPFTVN 489
P +H+V EP+T+
Sbjct: 565 YAVPRAVHLVREPWTIE 581
>gi|430760345|ref|YP_007216202.1| Long-chain-fatty-acid--CoA ligase [Thioalkalivibrio nitratireducens
DSM 14787]
gi|430009969|gb|AGA32721.1| Long-chain-fatty-acid--CoA ligase [Thioalkalivibrio nitratireducens
DSM 14787]
Length = 633
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 116/373 (31%), Positives = 185/373 (49%), Gaps = 46/373 (12%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 118
+ +A+ VYTSGTTG PKGVML+H+N L +++ V + D+ LS LP H ER G
Sbjct: 206 EALASIVYTSGTTGPPKGVMLSHRNFLFNVQACLRAVQVSSRDRMLSFLPLSHALERTVG 265
Query: 119 YFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 176
Y+ + G+ + Y ++ L +DL +P +++VP ++E I +++ R+ +
Sbjct: 266 YYTPIAAGMTVAYARSISQLAEDLLTVRPTILVAVPRIFERAQERILERVEAGPRLRQRL 325
Query: 177 ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLV 236
FA+T +E F + + + R +L P LL +
Sbjct: 326 --------FAWT-LASGWEAFLHEQGRGR------------RRWSDGLLHP--LLDRLVA 362
Query: 237 YKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLG 296
+ G + +SGG LP + F+ ++GV + GYGLTE+SPVI+ R N
Sbjct: 363 RRVRVRFGGRLRFAISGGAPLPEAVGRFFLSLGVPIVQGYGLTETSPVISVNRLEDNEPT 422
Query: 297 SVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNT 356
+VG + E+++ GS+ + R VM GY+ NP AT+Q +D D W +T
Sbjct: 423 TVGPALPGVEVRV-----------GSQSELLTRSPSVMMGYWNNPDATRQVIDGDHWFHT 471
Query: 357 GDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVV 416
GD I P G + + GR KD +VLS GE V P ++E+A S L+ Q++V
Sbjct: 472 GDRACIGPR----------GHITITGRLKDILVLSNGEKVAPADVEQALAGSPLVEQVLV 521
Query: 417 IGQDQRRPGAIIV 429
+G + GA++V
Sbjct: 522 VGDSRPYLGALVV 534
>gi|260775231|ref|ZP_05884129.1| long-chain-fatty-acid--CoA ligase [Vibrio coralliilyticus ATCC
BAA-450]
gi|260608932|gb|EEX35094.1| long-chain-fatty-acid--CoA ligase [Vibrio coralliilyticus ATCC
BAA-450]
Length = 602
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 131/430 (30%), Positives = 202/430 (46%), Gaps = 55/430 (12%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 118
+D+ T +YTSGTTG PKGVML + N+ Q+ + D L LP HV+ERA
Sbjct: 178 EDLLTLIYTSGTTGQPKGVMLDYGNVAAQLEGHDARLSLSQDDVSLCFLPLSHVFERAWT 237
Query: 119 YFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 177
+++ RG Y +++ L QP M +VP YE ++S I +++ + R+V+
Sbjct: 238 FYVLYRGATNCYLQDTMQVREALSEVQPTVMCAVPRFYEKIFSAIHEKVSKAPMIRKVLF 297
Query: 178 RALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVY 237
+ + A + EG +QPS IL H LA+KLV
Sbjct: 298 TWAVNMGAKMAACDQ--EG-------RQPSL---------------ILKKSHQLADKLVL 333
Query: 238 KKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLG 296
K+++ +G + GG L I F+ A+G+ V++GYG+TE++ ++
Sbjct: 334 SKLRALLGGRINFMPCGGAKLDETIGRFFHAMGINVKLGYGMTETTATVSCWSDNSFNPD 393
Query: 297 SVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNT 356
S+G + ++KI E NE+L VRG VM+GY+K P T + DE G+L T
Sbjct: 394 SIGMAMPGAQVKI--GENNEIL---------VRGPMVMRGYYKMPEETAKTFDEHGFLKT 442
Query: 357 GDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVV 416
GD G I G L + R K+ + S G+ + P +E A + I QI V
Sbjct: 443 GDAGHIDED----------GNLFITDRIKELMKTSGGKYIAPQMIEGAIGKDHFIEQIAV 492
Query: 417 IGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLLYGELRKW 468
I ++ A+IVP + + AK L+I + D EL K EK ++ L EL K+
Sbjct: 493 IADTRKFVSALIVPCYDSLEEYAKELNIKYHDRVELIKHHQVVEMLEKRVNDLQQELAKF 552
Query: 469 TSKCSFQIGP 478
F++ P
Sbjct: 553 EQVKKFKLLP 562
>gi|158520331|ref|YP_001528201.1| AMP-dependent synthetase and ligase [Desulfococcus oleovorans Hxd3]
gi|158509157|gb|ABW66124.1| AMP-dependent synthetase and ligase [Desulfococcus oleovorans Hxd3]
Length = 597
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 145/469 (30%), Positives = 218/469 (46%), Gaps = 58/469 (12%)
Query: 26 SYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLL 85
S+DE + LG+ D D + + + G D A VYTSGTTG PKG +LTH NL
Sbjct: 152 SFDEFLALGK-------DVADEKLKERIDAAGPSDPAAIVYTSGTTGVPKGAVLTHDNLT 204
Query: 86 HQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYT-AVRNLKDDLQRYQ 144
+S + GD LP HV+ R C YF G + ++ L DDL+ +
Sbjct: 205 FTAQSARECADIHEGDNTFLFLPLAHVFARLCVYFSVLTGTCTTFARSIDTLVDDLKASE 264
Query: 145 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQK 204
P + SVP +YE +Y+ ++ + + A+ +A + R +A T I + R K
Sbjct: 265 PDWFASVPRIYEKVYA----KVISGAEAKGGLALKIFR--WACTVGNEISD----RRLNK 314
Query: 205 QPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDL 263
QP I A + +A KLV+ K+Q+A+G + +SG L I
Sbjct: 315 QP--------------IPAGTAFKYKIATKLVFSKLQAALGGRVRWCISGAAPLNPDIAK 360
Query: 264 FYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSK 323
F+ A V + G G++E++ R G VG P E KI AE EVL
Sbjct: 361 FFHAADVLILEGLGMSENTSFTNVNRVDNYRFGWVGQPGPGIEQKI--AEDGEVL----- 413
Query: 324 GIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGR 383
RG VM+ Y+K P T + + DGW +TGD+G I G L + GR
Sbjct: 414 ----FRGRNVMKEYYKMPEETAKTIAPDGWQSTGDLGEIDDQ----------GFLQITGR 459
Query: 384 AKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLS 443
KD I+ + G+N+ P +E S I Q+ VIG ++ A++V D E V A+ +
Sbjct: 460 KKDLIITAGGKNIAPSAIEGVIATSKYIAQVTVIGDRRKYLTALVVMDPETVAEYAQSNN 519
Query: 444 IVHADASEL-SKEKTISLLYGEL-RKWTSKCSFQ-IGPIHVVDEPFTVN 489
I D ++L K + + L+ E+ K + SF+ I + +V E FT++
Sbjct: 520 IAFTDINDLGQKPEILKLIETEVAEKNKAFASFENIKKVTIVPE-FTID 567
>gi|417850883|ref|ZP_12496700.1| FadD [Pasteurella multocida subsp. gallicida str. Anand1_poultry]
gi|338220259|gb|EGP05803.1| FadD [Pasteurella multocida subsp. gallicida str. Anand1_poultry]
Length = 606
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 123/410 (30%), Positives = 199/410 (48%), Gaps = 50/410 (12%)
Query: 60 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRS---LYDIVPAENGDKFLSMLPPWHVYERA 116
D+ T +YTSGTTG PKGVML + NL HQ+++ + + D LS LP H++ERA
Sbjct: 179 DLFTLIYTSGTTGEPKGVMLDYANLAHQLKAHDEAFTTLNVSQYDSSLSFLPLSHIFERA 238
Query: 117 CGYFIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 175
++ RG Y N +++ L +P M +VP YE +Y+ + ++ + RR+
Sbjct: 239 WVAYVLHRGAVNCYLEDTNRVREALSEIRPTLMCAVPRFYEKIYTAVWDKVQKAPLFRRM 298
Query: 176 VARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKL 235
+ ++A ++ ++ +QK+P I +L + LA+KL
Sbjct: 299 I------FNWAIVVGQKCFQFI----SQKKP--------------IPFVLRQQYALADKL 334
Query: 236 VYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNV 294
V K++ +G + GG L +I LF+ +IG+ V++GYG+TE++ ++
Sbjct: 335 VLSKLRQLLGGRIRMMPCGGAKLEPNIGLFFHSIGINVKLGYGMTETTATVSCWEEGHFE 394
Query: 295 LGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWL 354
S+G + E+KI E NE+L VRG VM+GY+K P T + EDG+L
Sbjct: 395 PNSIGTLMPGAEVKI--GENNEIL---------VRGGMVMRGYYKKPQETADSFTEDGFL 443
Query: 355 NTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQI 414
TGD G P G L + R K+ + S G+ + P +E + I QI
Sbjct: 444 KTGDAGEFDPQ----------GNLYITDRIKELMKTSNGKYIAPQYIETKVGKDKFIEQI 493
Query: 415 VVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGE 464
VI ++ A+IVP + AK+L+I + D EL K I ++ +
Sbjct: 494 AVIADAKKYVSALIVPCFNSLEEYAKQLNIKYHDRLELIKHSDILQMFEQ 543
>gi|343500486|ref|ZP_08738379.1| long-chain-fatty-acid--CoA ligase [Vibrio tubiashii ATCC 19109]
gi|418481417|ref|ZP_13050460.1| long-chain-fatty-acid--CoA ligase [Vibrio tubiashii NCIMB 1337 =
ATCC 19106]
gi|342820330|gb|EGU55154.1| long-chain-fatty-acid--CoA ligase [Vibrio tubiashii ATCC 19109]
gi|384570934|gb|EIF01477.1| long-chain-fatty-acid--CoA ligase [Vibrio tubiashii NCIMB 1337 =
ATCC 19106]
Length = 602
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 131/437 (29%), Positives = 201/437 (45%), Gaps = 55/437 (12%)
Query: 52 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWH 111
+ E DD+ T +YTSGTTG PKGVM+ + N+ Q+ + D L LP H
Sbjct: 171 RLEQANLDDLLTLIYTSGTTGQPKGVMVDYANIGAQLEGHDQRLSLSQSDVSLCFLPLSH 230
Query: 112 VYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSS 170
V+ERA ++ +G Y ++D L +P M +VP YE ++S I +++ +
Sbjct: 231 VFERAWTFYALYKGATNCYLQDTMQVRDALSEVRPTVMCAVPRFYEKIFSAIHEKVAKAP 290
Query: 171 AARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHL 230
R+V+ F + C +K PS L H
Sbjct: 291 FIRKVL--------FTWAVNMGAKMAVCHQEGRK-PSI---------------ALKKSHA 326
Query: 231 LAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARR 289
LA+KLV K+++ +G + GG L I F+ AIG+ V++GYG+TE++ ++
Sbjct: 327 LADKLVLSKLRALLGGQINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTATVSCWD 386
Query: 290 PTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALD 349
C S+G + ++KI E NE+L VRG VM+GY+K P T + D
Sbjct: 387 DKCFNPDSIGMAMPGAQVKI--GENNEIL---------VRGPMVMRGYYKMPEETAKTFD 435
Query: 350 EDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSS 409
E G+L TGD G I + G L + R K+ + S G+ + P +E A +
Sbjct: 436 EHGFLKTGDAGHIDEN----------GNLFITDRIKELMKTSGGKYIAPQMIEGAIGKDH 485
Query: 410 LIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLL 461
I QI VI ++ A+IVP + + AK L+I + D EL K EK ++ L
Sbjct: 486 FIEQIAVIADTRKFVSALIVPCYDSLEEYAKELNIKYHDRVELIKHHQVVEMLEKRVNEL 545
Query: 462 YGELRKWTSKCSFQIGP 478
EL K+ F++ P
Sbjct: 546 QQELAKFEQVKKFKLLP 562
>gi|329964579|ref|ZP_08301633.1| AMP-binding enzyme [Bacteroides fluxus YIT 12057]
gi|328524979|gb|EGF52031.1| AMP-binding enzyme [Bacteroides fluxus YIT 12057]
Length = 645
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 132/441 (29%), Positives = 203/441 (46%), Gaps = 54/441 (12%)
Query: 56 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPA-ENGDKFLSMLPPWHVYE 114
+ S DIA +YTSGTTG PKGVML H N + R+ +P+ + D +S LP HV+E
Sbjct: 221 VSSADIANILYTSGTTGEPKGVMLMHYNYMEAFRTHEIRIPSLTDQDVSMSFLPLTHVFE 280
Query: 115 RACGYFIFSRGIELMYTAV-RNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 173
R Y RG ++ ++++ ++ +P M SVP +E +Y G+Q++I + +
Sbjct: 281 RGWTYVCLQRGAQVCVNLRPQDIQTTIKEIRPTVMCSVPRFWEKVYQGVQERIEQETGLK 340
Query: 174 RVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAE 233
+ + I++ A+ R K P ++ L + E
Sbjct: 341 KAMMLDAIKVGRAH--------NLDYLRLGKTPPLMLHL---------------KYKFYE 377
Query: 234 KLVYKKIQSAIGISKAGV--SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPT 291
K VY ++ IGI + G ++ + F ++G+ + VGYGLTES+ ++ P
Sbjct: 378 KTVYALLKKTIGIENGTFFPTAGAAVSNEVCEFVHSVGINMVVGYGLTESTATVSCFLPR 437
Query: 292 CNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDED 351
VLGSVG + E+KI E NEVL +RG + GY+K AT +A+D D
Sbjct: 438 NFVLGSVGEMMPDLEVKI--GENNEVL---------LRGKTITPGYYKKAEATAEAIDAD 486
Query: 352 GWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLI 411
GW +TGD G R G L L R KD S G+ + P LE + I
Sbjct: 487 GWFHTGDAG-----------RLEGNTLYLTDRIKDLFKTSNGKYICPQALETQFIIDRYI 535
Query: 412 RQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSK 471
QI VI +++ A+IVP V AK I + +L + I L+ R T +
Sbjct: 536 DQIAVIADERKFVSALIVPVYGLVKGYAKEKGIEYQSMKDLLEHPKIQALF-RARIDTLQ 594
Query: 472 CSF----QIGPIHVVDEPFTV 488
F Q+ ++ EPF++
Sbjct: 595 QQFAHYEQVKRFTLLPEPFSM 615
>gi|365121016|ref|ZP_09338186.1| hypothetical protein HMPREF1033_01532 [Tannerella sp.
6_1_58FAA_CT1]
gi|363646486|gb|EHL85732.1| hypothetical protein HMPREF1033_01532 [Tannerella sp.
6_1_58FAA_CT1]
Length = 603
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 131/449 (29%), Positives = 202/449 (44%), Gaps = 60/449 (13%)
Query: 28 DEIIDLGRESRKAFSDSNDARKHYKYE----TIGSDDIATYVYTSGTTGNPKGVMLTHKN 83
D+ I + E D HY E + +D+ + +YTSGTTG PKGVMLT+ N
Sbjct: 147 DDTISIRFEDLYKIGKQADNVLHYTLEQRMLSASDEDLVSIIYTSGTTGEPKGVMLTNSN 206
Query: 84 LLHQIR-SLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNLKDD--- 139
+R + + D L LP H++ERA YF +GI + V N K D
Sbjct: 207 FNEAMRIHIQRLKMVSEKDISLCFLPLTHIFERAWTYFCLVKGIRV----VINQKPDEIQ 262
Query: 140 --LQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGF 197
++ +P M SVP +E +Y+ +Q++I TS +R++ + T KR
Sbjct: 263 SIIKEVRPTIMCSVPRFWEKVYTAVQEKISTSKGIQRIMMMKAVE-----TGRKR---NI 314
Query: 198 CLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV--SGGG 255
R +K+ + + LW +KLV KI+ AIG+ + + G
Sbjct: 315 DFLRLEKKVPFFLECRYRLW---------------DKLVLSKIRKAIGVENGNIFPTAGA 359
Query: 256 SLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETN 315
L I+ F + G+ + GYGL+E++ + + G+VG + ++K+ E N
Sbjct: 360 PLSDTINEFLHSCGINIIYGYGLSETTATVTCFEISGYEFGTVGTTLPGIQVKM--GEDN 417
Query: 316 EVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCG 375
E+L V+G VM+GY+K P T + +DGW TGD G +
Sbjct: 418 EIL---------VKGGTVMKGYYKKPEETAKVFTKDGWFKTGDAGKLNAE---------- 458
Query: 376 GVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 435
G LVL R KD STG+ + P +E I Q+ VIG ++ AII+P E +
Sbjct: 459 GSLVLTERIKDLFKTSTGKYIAPQAIETKLGEDKYIDQVAVIGDQRKYVTAIIIPAYEAL 518
Query: 436 LMAAKRLSIVHADASELSKEKTISLLYGE 464
A + I + + EL K ++I L E
Sbjct: 519 KEYAAQKQIQYRNLEELVKNQSIQKLIQE 547
>gi|326336308|ref|ZP_08202479.1| long-chain-fatty-acid--CoA ligase [Capnocytophaga sp. oral taxon
338 str. F0234]
gi|325691482|gb|EGD33450.1| long-chain-fatty-acid--CoA ligase [Capnocytophaga sp. oral taxon
338 str. F0234]
Length = 596
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 124/435 (28%), Positives = 216/435 (49%), Gaps = 51/435 (11%)
Query: 60 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGY 119
DI T +YTSGTTG PKGV++ ++N+ +Q+ + + + + G+ +S LP HVYER
Sbjct: 180 DIYTIIYTSGTTGKPKGVLIDYENVAYQLINHDERLTVKEGNVSMSFLPLSHVYERLWLA 239
Query: 120 FIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 178
++ +G+ Y N + + L+ +PHYM VP + E +Y+ I + + S +R++
Sbjct: 240 YVLHKGVINCYLDDTNRVAEALKEVKPHYMCVVPRLLEKIYTKIYENVGKQSLIKRMI-- 297
Query: 179 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 238
SFA TR K + L + + IL L+ ++KLV++
Sbjct: 298 ----FSFA-------------TRTAK-----IHLKQKRKGKRVSFILQELYNFSDKLVFR 335
Query: 239 KIQSAIGISKAGVSGGGS-LPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 297
K++ A+G + + GG+ L I F+ AIGV V +GYG+TE++ +A L S
Sbjct: 336 KLKEALGGNIQMIPCGGALLEPSIGRFFRAIGVNVTLGYGMTETTATVACWDIKFK-LKS 394
Query: 298 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 357
VG + + E+KI E NE+L ++G + +GY+ NP +A DG+ TG
Sbjct: 395 VGTVLPNIEVKI--GENNEIL---------LKGGSITKGYYNNPEENVKAFTSDGYFRTG 443
Query: 358 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 417
D G++ G L + R K+ + S G+ + P ++E + S I QI +I
Sbjct: 444 DAGYLDKE----------GNLFITERIKELMKTSNGKYIAPQQIEGKVGKDSFIEQIAII 493
Query: 418 GQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE-KTISLLYGELRKWTSKCSF-- 474
++ A+IVP+ + ++ AK L++ + + S+L K + + L+ +
Sbjct: 494 ADARKYVSALIVPNYDALVEYAKSLNLKYKNYSDLIKNSQIVDFFQKRLQNLQQGLAAYE 553
Query: 475 QIGPIHVVDEPFTVN 489
QI ++ PF++N
Sbjct: 554 QIKKFTLLTTPFSIN 568
>gi|429888249|ref|ZP_19369739.1| Long-chain-fatty-acid--CoA ligase [Vibrio cholerae PS15]
gi|429224692|gb|EKY31030.1| Long-chain-fatty-acid--CoA ligase [Vibrio cholerae PS15]
Length = 601
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 137/466 (29%), Positives = 217/466 (46%), Gaps = 63/466 (13%)
Query: 31 IDLGRESRKAFSDSNDARKHYK--------YETIGSDDIATYVYTSGTTGNPKGVMLTHK 82
IDL + S D A+ H++ E DD+ T +YTSGTTG PKGVML ++
Sbjct: 142 IDLKQASCAMHWDEFVAQSHHQDRAPLDALIEQANYDDLFTLIYTSGTTGTPKGVMLDYR 201
Query: 83 NLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQ 141
N+ Q+ + D L LP HV+ERA ++ +G Y V ++++ L
Sbjct: 202 NIGAQLEGHDQRLNLTQEDVSLCFLPLSHVFERAWTAYVLYKGATNCYLQDVAHVREALA 261
Query: 142 RYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTR 201
+P M +VP YE ++S I +++ + R+V+ F + C +
Sbjct: 262 EVRPTVMCAVPRFYEKIFSAIHEKVAKAPLVRKVL--------FTWAVNMGAKMAVC-RQ 312
Query: 202 NQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMH 260
Q+QPS++ L H A+KLV K+++ +G + GG L
Sbjct: 313 QQRQPSWM---------------LKQSHQFADKLVLSKLRALLGGRINFMPCGGAKLDET 357
Query: 261 IDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA 320
I F+ AIG+ V++GYG+TE++ ++ C S+G + ++KI E NE+L
Sbjct: 358 IGRFFHAIGINVKLGYGMTETTATVSCWDDHCFNPDSIGLSMPGAQVKI--GENNEIL-- 413
Query: 321 GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVL 380
VRG VM+GY+K T ++ DE G+L TGD G I + G + +
Sbjct: 414 -------VRGPMVMRGYYKLDKETAESFDEHGFLKTGDAGHIDEN----------GNVFI 456
Query: 381 EGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAK 440
R K+ + S G+ + P +E A + I QI VI ++ A+IVP + + AK
Sbjct: 457 TDRIKELMKTSGGKYIAPQVIEGAIGKDHFIEQIAVIADTRKFVSALIVPCFDSLEEYAK 516
Query: 441 RLSIVHADASELSK--------EKTISLLYGELRKWTSKCSFQIGP 478
L+I + D EL K EK ++ L EL K+ F++ P
Sbjct: 517 ELNIKYHDRLELIKHSQVLEMFEKRVNDLQKELAKFEQVKKFRLLP 562
>gi|145636795|ref|ZP_01792461.1| long chain fatty acid CoA ligase [Haemophilus influenzae PittHH]
gi|145270093|gb|EDK10030.1| long chain fatty acid CoA ligase [Haemophilus influenzae PittHH]
Length = 599
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 125/407 (30%), Positives = 191/407 (46%), Gaps = 47/407 (11%)
Query: 60 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGY 119
D+ T +YTSGTTG PKGVML + NL HQ+ + + + D LS LP H++ERA
Sbjct: 178 DLFTIIYTSGTTGEPKGVMLDYANLAHQLETHDLSLNVTDQDISLSFLPFSHIFERAWAA 237
Query: 120 FIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 178
+I RG L Y N ++ L +P M +VP YE +Y+ + ++ + R+++
Sbjct: 238 YILHRGAILCYLEDTNQVRSALTEIRPTLMCAVPRFYEKIYAAVLDKVQKAPKLRQIMFH 297
Query: 179 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 238
I + + F L N K +L L LA+KLV
Sbjct: 298 WAISVGQKH---------FDLRANNKAIPFL---------------LKKQFALADKLVLS 333
Query: 239 KIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 297
K++ +G K GG L I LF+ AIG+ +++GYG+TE++ ++ S
Sbjct: 334 KLRQLLGGRIKMMPCGGAKLEPAIGLFFHAIGINIKLGYGMTETTATVSCWHDFQFNPNS 393
Query: 298 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 357
+G + E+KI E NE+L VRG VM+GY+K P T Q EDG+L TG
Sbjct: 394 IGTLMPKAEVKI--GENNEIL---------VRGGMVMKGYYKKPEETAQTFTEDGFLKTG 442
Query: 358 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 417
D G G L + R K+ + S G+ + P +E + I QI +I
Sbjct: 443 DAGEFDEQ----------GNLFITDRIKELMKTSNGKYIAPQYIESKIGKDKFIEQIAII 492
Query: 418 GQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGE 464
++ A+IVP + + AK+L+I + D EL K I ++ +
Sbjct: 493 ADAKKYVSALIVPCFDSLEEYAKQLNIKYHDRLELLKNSDILKMFEQ 539
>gi|237720321|ref|ZP_04550802.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|336415414|ref|ZP_08595754.1| hypothetical protein HMPREF1017_02862 [Bacteroides ovatus
3_8_47FAA]
gi|423290471|ref|ZP_17269320.1| hypothetical protein HMPREF1069_04363 [Bacteroides ovatus
CL02T12C04]
gi|423294228|ref|ZP_17272355.1| hypothetical protein HMPREF1070_01020 [Bacteroides ovatus
CL03T12C18]
gi|229450072|gb|EEO55863.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|335941010|gb|EGN02872.1| hypothetical protein HMPREF1017_02862 [Bacteroides ovatus
3_8_47FAA]
gi|392665858|gb|EIY59381.1| hypothetical protein HMPREF1069_04363 [Bacteroides ovatus
CL02T12C04]
gi|392675419|gb|EIY68860.1| hypothetical protein HMPREF1070_01020 [Bacteroides ovatus
CL03T12C18]
Length = 604
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 131/443 (29%), Positives = 207/443 (46%), Gaps = 54/443 (12%)
Query: 54 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYD-IVPAENGDKFLSMLPPWHV 112
E DD+A +YTSGTTG PKGVML H L Q + D + + D ++ LP HV
Sbjct: 175 ERASYDDLANILYTSGTTGEPKGVMLHHSCYLEQFHTHDDRLTTMSDKDVSMNFLPLTHV 234
Query: 113 YERACGYFIFSRGIEL-MYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSA 171
+E+A Y +G+++ + +++ ++ +P M SVP +E +Y+G+Q++I ++
Sbjct: 235 FEKAWCYLCIHKGVQICINLRPADIQTTIKEIRPTLMCSVPRFWEKVYAGVQEKINETTG 294
Query: 172 ARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLL 231
++ + IR+ RI+ R K P + L +
Sbjct: 295 LKKALMLDAIRVG-------RIH-NLDYLRLGKTPPVMNQL---------------KYKF 331
Query: 232 AEKLVYKKIQSAIGISKAGV--SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARR 289
EK +Y ++ IGI + G ++P I+ F ++G+ + VGYGLTES+ ++
Sbjct: 332 YEKTIYSLLKKTIGIENGNFFPTAGAAVPDEINEFVHSVGINMVVGYGLTESTATVSCTL 391
Query: 290 PTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALD 349
P +GSVG + E+KI E NE+L +RG + +GY+K AT A++
Sbjct: 392 PVGYDIGSVGVVLPGIEVKI--GEDNEIL---------LRGKTITKGYYKKAEATAAAIE 440
Query: 350 EDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSS 409
DGW +TGD G+ G L L R KD S G+ V P LE +
Sbjct: 441 PDGWFHTGDAGYFK-----------NGQLFLTERIKDLFKTSNGKYVAPQALETKLVIDR 489
Query: 410 LIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWT 469
I QI +I ++ A+IVP V AK I + D +EL + I L+ R T
Sbjct: 490 YIDQIAIIADQRKFVSALIVPVYGFVKEYAKEKGIEYKDMTELLQHPKIVGLF-RARIDT 548
Query: 470 SKCSF----QIGPIHVVDEPFTV 488
+ F QI ++ EPF++
Sbjct: 549 LQQQFAHYEQIKRFTLLPEPFSM 571
>gi|383110916|ref|ZP_09931734.1| hypothetical protein BSGG_2021 [Bacteroides sp. D2]
gi|313694486|gb|EFS31321.1| hypothetical protein BSGG_2021 [Bacteroides sp. D2]
Length = 604
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 130/444 (29%), Positives = 209/444 (47%), Gaps = 56/444 (12%)
Query: 54 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYD-IVPAENGDKFLSMLPPWHV 112
E DD+A +YTSGTTG PKGVML H L Q + D + + D ++ LP HV
Sbjct: 175 ERASYDDLANILYTSGTTGEPKGVMLHHSCYLEQFHTHDDRLTTMSDKDVSMNFLPLTHV 234
Query: 113 YERACGYFIFSRGIEL-MYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSA 171
+E+A Y +G+++ + +++ ++ +P M SVP +E +Y+G+Q++I ++
Sbjct: 235 FEKAWCYLCIHKGVQICINLRPADIQTTIKEIRPTLMCSVPRFWEKVYAGVQEKINETTG 294
Query: 172 ARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPL-HL 230
++ + IR+ RI+ +D+L ++ L +
Sbjct: 295 LKKALMLDAIRVG-------RIHN-----------------LDYLRLGKTPPVMNQLKYK 330
Query: 231 LAEKLVYKKIQSAIGISKAGV--SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAAR 288
EK +Y ++ IGI + G ++P I+ F ++G+ + VGYGLTES+ ++
Sbjct: 331 FYEKTIYSLLKKTIGIENGNFFPTAGAAVPDEINEFVHSVGINMVVGYGLTESTATVSCT 390
Query: 289 RPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQAL 348
P +GSVG + E+KI E NE+L +RG + +GY+K AT A+
Sbjct: 391 LPVGYDIGSVGVVLPGLEVKI--GEDNEIL---------LRGKTITKGYYKKAEATAAAI 439
Query: 349 DEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRS 408
+ DGW +TGD G+ G L L R KD S G+ V P LE +
Sbjct: 440 EPDGWFHTGDAGYFK-----------NGQLFLTERIKDLFKTSNGKYVAPQALETKLVID 488
Query: 409 SLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKW 468
I QI +I ++ A+IVP V AK I + D +EL + I L+ R
Sbjct: 489 RYIDQIAIIADQRKFVSALIVPVYGFVKEYAKEKGIEYKDMTELLQHPKIVGLF-RARID 547
Query: 469 TSKCSF----QIGPIHVVDEPFTV 488
T + F QI ++ EPF++
Sbjct: 548 TLQQQFAHYEQIKRFTLLPEPFSM 571
>gi|405373569|ref|ZP_11028309.1| Long-chain-fatty-acid--CoA ligase [Chondromyces apiculatus DSM 436]
gi|397087523|gb|EJJ18562.1| Long-chain-fatty-acid--CoA ligase [Myxococcus sp. (contaminant ex
DSM 436)]
Length = 622
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 131/428 (30%), Positives = 204/428 (47%), Gaps = 65/428 (15%)
Query: 13 SVAPDIVEEIPVFSYDEI-----IDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYT 67
SVA ++ E P +E+ + GR A D DAR + DD A +YT
Sbjct: 150 SVAKLVLFEGPAAGGNELALSDFVAQGRTEHAARPDDFDAR----VNAVSMDDTAALIYT 205
Query: 68 SGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIE 127
SGTTG+PKGV+LTH+N + ++ + GD + LP HV+ + S G
Sbjct: 206 SGTTGDPKGVILTHRNWAFEAKAAQSVGMMAPGDSVMLFLPLAHVFAQVVKASWLSMGYR 265
Query: 128 LMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFA 186
L+ +V L +L +P + SVP V+E +Y+ + + S+A + R L R +F
Sbjct: 266 LIIAESVEKLLANLVETRPTVLPSVPRVFEKVYNNV---VANGSSAPGLKGR-LFRWAF- 320
Query: 187 YTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGI 246
++++ + R+Q + + LA+KLV+ K+++AI
Sbjct: 321 -----KLFDEYVEARSQGREYSSLGFA-----------------LAKKLVFAKVRAAISE 358
Query: 247 SKAG-----VSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHP 301
G +SGG L I F++ +G+KV GYGLTE+S R +G+VG P
Sbjct: 359 KLGGNMRLFISGGAPLSPKIGYFFDLLGLKVLEGYGLTETSAGSTVNREHKIKIGTVGAP 418
Query: 302 INHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGW 361
+ +++I S G + +RG VM+GY+KNP AT +A+D DGW +TGDIG
Sbjct: 419 MPGLDVQI-----------ASDGEILIRGPSVMKGYYKNPEATAEAIDADGWFHTGDIGE 467
Query: 362 IAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQ 421
+ + L + R KD IV + G+NV P LE + +I Q VV G
Sbjct: 468 LDSDN----------YLRITDRKKDIIVTAGGKNVAPQNLENSLKTHPIISQAVVTG--D 515
Query: 422 RRPGAIIV 429
+RP +++
Sbjct: 516 KRPYLVVL 523
>gi|425065789|ref|ZP_18468909.1| Long-chain-fatty-acid--CoA ligase [Pasteurella multocida subsp.
gallicida P1059]
gi|404383284|gb|EJZ79738.1| Long-chain-fatty-acid--CoA ligase [Pasteurella multocida subsp.
gallicida P1059]
Length = 606
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 125/410 (30%), Positives = 197/410 (48%), Gaps = 50/410 (12%)
Query: 60 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRS---LYDIVPAENGDKFLSMLPPWHVYERA 116
D+ T +YTSGTTG PKGVML + NL HQ+++ + + D LS LP H++ERA
Sbjct: 179 DLFTLIYTSGTTGEPKGVMLDYANLAHQLKAHDEAFTTLNVSQYDSSLSFLPLSHIFERA 238
Query: 117 CGYFIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 175
++ RG Y N +++ L +P M +VP YE +Y+ + ++ + RR+
Sbjct: 239 WVAYVLHRGAVNCYLEDTNRVREALSEIRPTLMCAVPRFYEKIYTAVWDKVQKAPLFRRM 298
Query: 176 VARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKL 235
+ I + F+ I +QK+P I +L + LA+KL
Sbjct: 299 IFNWAIAV--GQKRFQFI--------SQKKP--------------IPFVLRQQYALADKL 334
Query: 236 VYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNV 294
V K++ +G + GG L +I LF+ +IG+ V++GYG+TE++ ++
Sbjct: 335 VLSKLRQLLGGRIRMMPCGGAKLEPNIGLFFHSIGINVKLGYGMTETTATVSCWEEGHFE 394
Query: 295 LGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWL 354
S+G + E+KI E NE+L VRG VM+GY+K P T + EDG+L
Sbjct: 395 PNSIGTLMPGAEVKI--GENNEIL---------VRGGMVMRGYYKKPQETADSFTEDGFL 443
Query: 355 NTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQI 414
TGD G P G L + R K+ + S G+ + P +E + I QI
Sbjct: 444 KTGDAGEFDPQ----------GNLYITDRIKELMKTSNGKYIAPQYIETKVGKDKFIEQI 493
Query: 415 VVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGE 464
VI ++ A+IVP + AK+L+I + D EL K I ++ +
Sbjct: 494 AVIADAKKYVSALIVPCFNSLEEYAKQLNIKYHDRLELIKHSDILQMFEQ 543
>gi|222111040|ref|YP_002553304.1| AMP-dependent synthetase and ligase [Acidovorax ebreus TPSY]
gi|221730484|gb|ACM33304.1| AMP-dependent synthetase and ligase [Acidovorax ebreus TPSY]
Length = 609
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 130/436 (29%), Positives = 208/436 (47%), Gaps = 46/436 (10%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 118
+D+A VYTSGTTG PKGVML+H N++ ++++ + + D FLS LP H +ER G
Sbjct: 185 EDLAAIVYTSGTTGKPKGVMLSHANVVADVKAVLERIAPTPQDVFLSFLPLSHTFERTGG 244
Query: 119 YFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 176
Y++ + G ++Y +V L +DL+ +P ++SVP +YE +++ + + + S
Sbjct: 245 YYLPMASGSCVVYARSVAQLAEDLKNVRPTVLVSVPRIYERVHAKLIETLSPSP------ 298
Query: 177 ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLV 236
+++ A ++ FC + P A W R A+ WP L LV
Sbjct: 299 ----LKMQLFQAAQAVGWKRFCAAQRLPAPQDDGA---GGWMR---ALPWP---LLRALV 345
Query: 237 YKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVL 295
K + + G + VSGG L I + +G+++ GYG+TE++PV++ N
Sbjct: 346 AKPLLAQFGGRVRVAVSGGAPLSPTIAHCFLGLGLQLVQGYGMTETTPVVSVNTLEDNDP 405
Query: 296 GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLN 355
+VG + E++I G ++VRG VM+GY+K P T + + DGWL
Sbjct: 406 STVGRALPGVEVRI-----------GENRELQVRGPIVMKGYWKRPEDTARTVSADGWLG 454
Query: 356 TGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIV 415
TGD I GR R + GR K+ IV STGE V P +LE A +L Q
Sbjct: 455 TGDQAEIV----DGRIR-------ILGRIKEIIVTSTGEKVPPADLELAITADALFEQAF 503
Query: 416 VIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSKCSFQ 475
V+G+ + + V EE A +L + D + L+ + K +
Sbjct: 504 VVGEQRPFIACVAVVHAEEWRQLAGQLGLDANDPASLAHPSAQRAALARIEKLAAGFPRY 563
Query: 476 IGP--IHVVDEPFTVN 489
P +H+V EP+T+
Sbjct: 564 AVPRAVHLVREPWTIE 579
>gi|261253922|ref|ZP_05946495.1| long-chain-fatty-acid--CoA ligase [Vibrio orientalis CIP 102891 =
ATCC 33934]
gi|417954558|ref|ZP_12597591.1| putative long-chain-fatty-acid-CoA ligase [Vibrio orientalis CIP
102891 = ATCC 33934]
gi|260937313|gb|EEX93302.1| long-chain-fatty-acid--CoA ligase [Vibrio orientalis CIP 102891 =
ATCC 33934]
gi|342815104|gb|EGU50031.1| putative long-chain-fatty-acid-CoA ligase [Vibrio orientalis CIP
102891 = ATCC 33934]
Length = 602
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 129/430 (30%), Positives = 201/430 (46%), Gaps = 55/430 (12%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 118
DD+ T +YTSGTTG PKGVML + N+ Q+ + D L LP HV+ERA
Sbjct: 178 DDLLTLIYTSGTTGQPKGVMLDYANIAAQLEGHDQRLSLSESDVSLCFLPLSHVFERAWT 237
Query: 119 YFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 177
+++ +G Y ++D L +P M +VP YE ++S I +++ + R+V+
Sbjct: 238 FYVLYKGATNCYLQDTMQVRDALSEVRPTVMCAVPRFYEKIFSAIHEKVAKAPFIRKVL- 296
Query: 178 RALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVY 237
F + C +K PS + L + LA+KLV
Sbjct: 297 -------FTWAVNMGAKMAVCHQEGRK-PSLM---------------LKKSYALADKLVL 333
Query: 238 KKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLG 296
K+++ +G + GG L I F+ AIG+ V++GYG+TE++ ++ C
Sbjct: 334 SKLRALLGGKINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTATVSCWDDKCFNPD 393
Query: 297 SVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNT 356
S+G + ++KI E NE+L VRG VM+GY+K P T + DE G+L T
Sbjct: 394 SIGMSMPGAQVKI--GENNEIL---------VRGPMVMRGYYKMPEETAKTFDEHGFLKT 442
Query: 357 GDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVV 416
GD G I + G V + + R K+ + S G+ + P +E + I QI V
Sbjct: 443 GDAGHIDEN---------GNVFITD-RIKELMKTSNGKYIAPQMVEGTIGKDHFIEQIAV 492
Query: 417 IGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLLYGELRKW 468
I ++ A+IVP + + AK L+I + D EL K EK ++ L EL K+
Sbjct: 493 IADTRKFVSALIVPCYDSLEEYAKELNIKYHDRVELVKHHQIVEMLEKRVNDLQKELAKF 552
Query: 469 TSKCSFQIGP 478
F++ P
Sbjct: 553 EQVKKFKLLP 562
>gi|15602790|ref|NP_245862.1| FadD protein [Pasteurella multocida subsp. multocida str. Pm70]
gi|383309925|ref|YP_005362735.1| long-chain acyl--CoA synthetase [Pasteurella multocida subsp.
multocida str. HN06]
gi|12721245|gb|AAK03009.1| FadD [Pasteurella multocida subsp. multocida str. Pm70]
gi|380871197|gb|AFF23564.1| long-chain acyl--CoA synthetase [Pasteurella multocida subsp.
multocida str. HN06]
Length = 606
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 125/410 (30%), Positives = 197/410 (48%), Gaps = 50/410 (12%)
Query: 60 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRS---LYDIVPAENGDKFLSMLPPWHVYERA 116
D+ T +YTSGTTG PKGVML + NL HQ+++ + + D LS LP H++ERA
Sbjct: 179 DLFTLIYTSGTTGEPKGVMLDYANLAHQLKAHDEAFTTLNVSQYDSSLSFLPLSHIFERA 238
Query: 117 CGYFIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 175
++ RG Y N +++ L +P M +VP YE +Y+ + ++ + RR+
Sbjct: 239 WVAYVLHRGAVNCYLEDTNRVREALSEIRPTLMCAVPRFYEKIYTAVWDKVQKAPLFRRM 298
Query: 176 VARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKL 235
+ I + F+ I +QK+P I +L + LA+KL
Sbjct: 299 IFNWAIAV--GQKRFQFI--------SQKKP--------------IPFVLRQQYALADKL 334
Query: 236 VYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNV 294
V K++ +G + GG L +I LF+ +IG+ V++GYG+TE++ ++
Sbjct: 335 VLSKLRQLLGGRIRMMPCGGAKLEPNIGLFFHSIGINVKLGYGMTETTATVSCWEEGHFE 394
Query: 295 LGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWL 354
S+G + E+KI E NE+L VRG VM+GY+K P T + EDG+L
Sbjct: 395 PNSIGTLMPGAEVKI--GENNEIL---------VRGGMVMRGYYKKPQETADSFTEDGFL 443
Query: 355 NTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQI 414
TGD G P G L + R K+ + S G+ + P +E + I QI
Sbjct: 444 KTGDAGEFDPQ----------GNLYITDRIKELMKTSNGKYIAPQYIETKVGKDKFIEQI 493
Query: 415 VVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGE 464
VI ++ A+IVP + AK+L+I + D EL K I ++ +
Sbjct: 494 AVIADAKKYVSALIVPCFNSLEEYAKQLNIKYHDRLELIKHSDILQMFEQ 543
>gi|313204863|ref|YP_004043520.1| amp-dependent synthetase and ligase [Paludibacter propionicigenes
WB4]
gi|312444179|gb|ADQ80535.1| AMP-dependent synthetase and ligase [Paludibacter propionicigenes
WB4]
Length = 634
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 128/457 (28%), Positives = 220/457 (48%), Gaps = 58/457 (12%)
Query: 52 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWH 111
+ E I DD+A YTSGTT +PKG+MLTH+N + ++ + L +LP H
Sbjct: 169 RVEAIKPDDLANITYTSGTTADPKGIMLTHRNYTANVEQALTLMDISTSTRTLLILPLDH 228
Query: 112 VYERACGYFIF----------SRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSG 161
+ G++ F G M T ++N+ +++ +P+ ++SVP + ++
Sbjct: 229 CFAHVAGFYSFMALGASVGTVQSGKTGMET-LKNIPINIKELKPNILLSVPALAKSFKKN 287
Query: 162 IQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARII 221
I+ I + + +S++Y EG+ + +
Sbjct: 288 IEANIRAQGDMVNRLFNFALNLSYSYNK-----EGYNKGKG------------------L 324
Query: 222 CAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDL--FYEAIGVKVQVGYGLT 279
+ PL +L +++++KK++ A G + GGG+L + IDL FY AIG+ + GYGL+
Sbjct: 325 QILKKPLIVLFDRILFKKVREAFGGNLDFFIGGGAL-LDIDLQRFYYAIGIPMFQGYGLS 383
Query: 280 ESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFK 339
E++P+I++ + LGS G+ + E+KI D+E + LP KG + ++G VM GYFK
Sbjct: 384 EATPIISSNGLKHHKLGSSGYLVKPLELKIYDSEGKQ-LPNYEKGEIVIKGENVMAGYFK 442
Query: 340 NPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPL 399
N AT + + +DGWL+TGD+G++ G L + GR K ++ S GE P
Sbjct: 443 NEKATAETI-KDGWLHTGDMGYM----------DNDGFLYVVGRFKSLLISSDGEKYSPE 491
Query: 400 ELEEA-ALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTI 458
+EE+ A S I Q+V+ A+IVP+KE + K + S +KE +
Sbjct: 492 GIEESIADNSRYIDQVVLYNNQNPYTTALIVPNKEALKRYVKEKKPQLSWDSNEAKELAL 551
Query: 459 SLLYGELRKWTSKCSFQ--------IGPIHVVDEPFT 487
+ L E+ ++ + + V+ EPF+
Sbjct: 552 NKLQKEINEYKKGGRLEGLFPERWLPSAVAVIGEPFS 588
>gi|378773920|ref|YP_005176163.1| putative long-chain-fatty-acid--CoA ligase [Pasteurella multocida
36950]
gi|356596468|gb|AET15194.1| putative long-chain-fatty-acid--CoA ligase [Pasteurella multocida
36950]
Length = 606
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 125/410 (30%), Positives = 197/410 (48%), Gaps = 50/410 (12%)
Query: 60 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRS---LYDIVPAENGDKFLSMLPPWHVYERA 116
D+ T +YTSGTTG PKGVML + NL HQ+++ + + D LS LP H++ERA
Sbjct: 179 DLFTLIYTSGTTGEPKGVMLDYANLAHQLKAHDEAFTTLNVSQYDSSLSFLPLSHIFERA 238
Query: 117 CGYFIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 175
++ RG Y N +++ L +P M +VP YE +Y+ + ++ + RR+
Sbjct: 239 WVAYVLHRGAVNCYLEDTNRVREALSEIRPTLMCAVPRFYEKIYTAVWDKVQKAPLFRRM 298
Query: 176 VARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKL 235
+ I + F+ I +QK+P I +L + LA+KL
Sbjct: 299 IFNWAIAV--GQKRFQFI--------SQKKP--------------IPFVLRQQYALADKL 334
Query: 236 VYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNV 294
V K++ +G + GG L +I LF+ +IG+ V++GYG+TE++ ++
Sbjct: 335 VLSKLRQLLGGRIRMMPCGGAKLEPNIGLFFHSIGINVKLGYGMTETTATVSCWEEGHFE 394
Query: 295 LGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWL 354
S+G + E+KI E NE+L VRG VM+GY+K P T + EDG+L
Sbjct: 395 PNSIGTLMPGAEVKI--GENNEIL---------VRGGMVMRGYYKKPQETADSFTEDGFL 443
Query: 355 NTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQI 414
TGD G P G L + R K+ + S G+ + P +E + I QI
Sbjct: 444 KTGDAGEFDPQ----------GNLYITDRIKELMKTSNGKYIAPQYIETKVGKDKFIEQI 493
Query: 415 VVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGE 464
VI ++ A+IVP + AK+L+I + D EL K I ++ +
Sbjct: 494 AVIADAKKYVSALIVPCFNSLEEYAKQLNIKYHDRLELIKHSDILQMFEQ 543
>gi|153871945|ref|ZP_02000979.1| AMP-dependent synthetase and ligase [Beggiatoa sp. PS]
gi|152071588|gb|EDN69020.1| AMP-dependent synthetase and ligase [Beggiatoa sp. PS]
Length = 602
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 119/389 (30%), Positives = 201/389 (51%), Gaps = 49/389 (12%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 118
D++A+ VYTSGTTG PKGVML+H+N+L ++ + D+FLS LP H +ER G
Sbjct: 183 DEMASIVYTSGTTGRPKGVMLSHRNMLGNAQAAASCIEFSYEDRFLSFLPLSHTFERTGG 242
Query: 119 YFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 176
Y++ G + Y +++ + DL +P ++SVP +YE +Y+ IQ Q+ S R +
Sbjct: 243 YYLPMVVGANVAYARSIQQIAQDLIALRPTILMSVPRIYEQVYAKIQNQLDKKSPLARHL 302
Query: 177 ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLV 236
+++ + + + ++G R P L+ + L L K V
Sbjct: 303 FTLGVQVGWRHFEY---HQG----RASWHPKLLLWPL--------------LRRLVAKPV 341
Query: 237 YKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLG 296
K+ G + +SGG +L + + +G+ + GYGLTE+SP+I+ RP N+
Sbjct: 342 LDKLG---GRMRLAISGGAALSPKVAQLFVGLGLNLLQGYGLTETSPIISVNRPNDNIPD 398
Query: 297 SVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNT 356
S+G + ++K+ E +E+L + +M GY+KN AT+ +D+DGWL+T
Sbjct: 399 SIGTTLPDVKVKL--GENDELL---------TQSPYIMLGYWKNSEATQNMIDKDGWLHT 447
Query: 357 GDIGWIAPHHSRGRSRRCG-GVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIV 415
GD ++R+ G L + GR K+ IV+ GE V P ++E SL Q++
Sbjct: 448 GD-----------KARQDAIGHLYITGRIKEIIVMGNGEKVPPTDMEMVIGTDSLFEQVM 496
Query: 416 VIGQDQRRPGAIIVPDKEEVLMAAKRLSI 444
+IG+ + A++V + E+ + AK L+I
Sbjct: 497 IIGEGKPFLAALVVLNIEQWHLFAKDLTI 525
>gi|299147218|ref|ZP_07040283.1| putative long-chain-fatty-acid--CoA ligase [Bacteroides sp. 3_1_23]
gi|298514496|gb|EFI38380.1| putative long-chain-fatty-acid--CoA ligase [Bacteroides sp. 3_1_23]
Length = 604
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 131/443 (29%), Positives = 207/443 (46%), Gaps = 54/443 (12%)
Query: 54 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYD-IVPAENGDKFLSMLPPWHV 112
E DD+A +YTSGTTG PKGVML H L Q + D + + D ++ LP HV
Sbjct: 175 ERASYDDLANILYTSGTTGEPKGVMLHHSCYLEQFHTHDDRLTTMSDKDVSMNFLPLTHV 234
Query: 113 YERACGYFIFSRGIEL-MYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSA 171
+E+A Y +G+++ + +++ ++ +P M SVP +E +Y+G+Q++I ++
Sbjct: 235 FEKAWCYLCIHKGVQVCINLRPADIQTTIKEIRPTLMCSVPRFWEKVYAGVQEKINETTG 294
Query: 172 ARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLL 231
++ + IR+ RI+ R K P + L +
Sbjct: 295 LKKALMLDAIRVG-------RIH-NLDYLRLGKTPPVMNQL---------------KYKF 331
Query: 232 AEKLVYKKIQSAIGISKAGV--SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARR 289
EK +Y ++ IGI + G ++P I+ F ++G+ + VGYGLTES+ ++
Sbjct: 332 YEKTIYSLLKKTIGIENGNFFPTAGAAVPDEINEFVHSVGINMVVGYGLTESTATVSCTL 391
Query: 290 PTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALD 349
P +GSVG + E+KI E NE+L +RG + +GY+K AT A++
Sbjct: 392 PVGYDIGSVGVVLPGIEVKI--GEDNEIL---------LRGKTITKGYYKKAEATAAAIE 440
Query: 350 EDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSS 409
DGW +TGD G+ G L L R KD S G+ V P LE +
Sbjct: 441 PDGWFHTGDAGYFK-----------NGQLFLTERIKDLFKTSNGKYVAPQALETKLVIDR 489
Query: 410 LIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWT 469
I QI +I ++ A+IVP V AK I + D +EL + I L+ R T
Sbjct: 490 YIDQIAIIADQRKFVSALIVPVYGFVKEYAKEKGIEYKDMTELLQHPKIVGLF-RARIDT 548
Query: 470 SKCSF----QIGPIHVVDEPFTV 488
+ F QI ++ EPF++
Sbjct: 549 LQQQFAHYEQIKRFTLLPEPFSM 571
>gi|422923777|ref|ZP_16956920.1| AMP-binding enzyme family protein [Vibrio cholerae BJG-01]
gi|341643515|gb|EGS67800.1| AMP-binding enzyme family protein [Vibrio cholerae BJG-01]
Length = 601
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 137/466 (29%), Positives = 217/466 (46%), Gaps = 63/466 (13%)
Query: 31 IDLGRESRKAFSDSNDARKHYK--------YETIGSDDIATYVYTSGTTGNPKGVMLTHK 82
IDL + S D A+ H++ E DD+ T +YTSGTTG PKGVML ++
Sbjct: 142 IDLKQASCAMHWDEFVAQSHHQDRAPLNALIEQANYDDLFTLIYTSGTTGTPKGVMLDYR 201
Query: 83 NLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQ 141
N+ Q+ + D L LP HV+ERA ++ +G Y V ++++ L
Sbjct: 202 NIGAQLEGHDQRLNLTQEDVSLCFLPLSHVFERAWTAYVLYKGATNCYLQDVAHVREALA 261
Query: 142 RYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTR 201
+P M +VP YE ++S I +++ + R+V+ F + C +
Sbjct: 262 EVRPTVMCAVPRFYEKIFSAIHEKVAKAPFVRKVL--------FTWAVNMGAKMAVC-RQ 312
Query: 202 NQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMH 260
Q+QPS++ L H A+KLV K+++ +G + GG L
Sbjct: 313 QQRQPSWM---------------LKQSHQFADKLVLSKLRALLGGRINFMPCGGAKLDET 357
Query: 261 IDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA 320
I F+ AIG+ V++GYG+TE++ ++ C S+G + ++KI E NE+L
Sbjct: 358 IGRFFHAIGINVKLGYGMTETTATVSCWDDHCFNPDSIGLSMPGAQVKI--GENNEIL-- 413
Query: 321 GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVL 380
VRG VM+GY+K T ++ DE G+L TGD G I + G + +
Sbjct: 414 -------VRGPMVMRGYYKLDKETAESFDEHGFLKTGDAGHIDEN----------GNVFI 456
Query: 381 EGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAK 440
R K+ + S G+ + P +E A + I QI VI ++ A+IVP + + AK
Sbjct: 457 TDRIKELMKTSGGKYIAPQVIEGAIGKDHFIEQIAVIADTRKFVSALIVPCFDSLEEYAK 516
Query: 441 RLSIVHADASELSK--------EKTISLLYGELRKWTSKCSFQIGP 478
L+I + D EL K EK ++ L EL K+ F++ P
Sbjct: 517 ELNIKYHDRLELIKHSQVLEMFEKRVNDLQKELAKFEQVKKFRLLP 562
>gi|419839901|ref|ZP_14363302.1| AMP-binding enzyme [Haemophilus haemolyticus HK386]
gi|386909003|gb|EIJ73687.1| AMP-binding enzyme [Haemophilus haemolyticus HK386]
Length = 602
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 125/407 (30%), Positives = 191/407 (46%), Gaps = 47/407 (11%)
Query: 60 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGY 119
D+ T +YTSGTTG PKGVML + NL HQ+ + + + D LS LP H++ERA
Sbjct: 178 DLFTIIYTSGTTGEPKGVMLDYANLAHQLEAHDLSLNVTDQDISLSFLPFSHIFERAWAA 237
Query: 120 FIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 178
+I RG L Y N ++ L +P M +VP YE +Y+ + ++ + R+++
Sbjct: 238 YILHRGAILCYLEDTNQVRSALTEIRPTLMCAVPRFYEKIYAAVLDKVQKAPKLRQIMFH 297
Query: 179 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 238
I + + F L N K +L L LA+KLV
Sbjct: 298 WAISVGQKH---------FDLRANNKTVPFL---------------LKKQFALADKLVLS 333
Query: 239 KIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 297
K++ +G K GG L I LF+ AIG+ +++GYG+TE++ ++ S
Sbjct: 334 KLRQLLGGRIKMMPCGGAKLEPAIGLFFHAIGINIKLGYGMTETTATVSCWHDFQFNPNS 393
Query: 298 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 357
+G + E+KI E NE+L VR VM+GY+K P T QA EDG+L TG
Sbjct: 394 IGTLMPKAEVKI--GENNEIL---------VRSGMVMKGYYKKPEETAQAFTEDGFLKTG 442
Query: 358 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 417
D G G L + R K+ + S G+ + P +E + I QI +I
Sbjct: 443 DAGEFDEQ----------GNLFITDRIKELMKTSNGKYIAPQYIESKIGKDKFIEQIAII 492
Query: 418 GQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGE 464
++ A+IVP + + AK+L+I + D EL K I ++ +
Sbjct: 493 ADAKKYVSALIVPCFDSLEEYAKQLNIKYHDRLELLKNSEILKMFEQ 539
>gi|340794017|ref|YP_004759480.1| acyl-CoA synthetase [Corynebacterium variabile DSM 44702]
gi|340533927|gb|AEK36407.1| acyl-CoA synthetase [Corynebacterium variabile DSM 44702]
Length = 607
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 125/419 (29%), Positives = 202/419 (48%), Gaps = 53/419 (12%)
Query: 43 DSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVP----AE 98
D +D + S D+A+ VYTSGTTG PKG L H N L + R+L P A
Sbjct: 167 DISDEEVEARIAATKSSDVASLVYTSGTTGRPKGCRLLHSNWLGEARALL-THPIGGIAV 225
Query: 99 NGDKFLSMLPPWHVYERACGYF-IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYET 157
G++ L+ LP HV RA + ++ + L + R QPH ++ VP V+E
Sbjct: 226 EGNRALTFLPLAHVLSRAVSLASTLGGATQSHWSEMATLVPEFARAQPHLILGVPRVFEK 285
Query: 158 LYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLW 217
+++G++ + + + + Y+ +G P
Sbjct: 286 VHAGVKSKAVDGGGIGAKIFPLAEKTAVEYSKALDTKQG---------PG---------- 326
Query: 218 ARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGY 276
A+L + +KLVY K+++A+G S + +SGG +L + F+ IGV++ GY
Sbjct: 327 -----ALLKAKRAVFDKLVYGKVRAAMGGSLQYCISGGSALNSELMHFFRGIGVRIYEGY 381
Query: 277 GLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQG 336
G+TE++ IA N++G+VG P+ ++I AE E+L ++G+ V G
Sbjct: 382 GMTETTAAIAVNFEPDNIIGTVGKPVGGNTVRI--AEDGEIL---------MKGTVVFDG 430
Query: 337 YFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENV 396
Y+ N ATK D DG+L +GD+G + P G L + GR K+ IV + G+NV
Sbjct: 431 YWNNEEATKDTFDGDGFLRSGDLGALLPT----------GHLKITGRKKEIIVTAGGKNV 480
Query: 397 EPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI-VHADASELSK 454
P LE+ + LI Q +V+G DQ+ G++I D++ + KR ++ H EL+K
Sbjct: 481 SPGPLEDILRSAPLISQAMVVGDDQKFIGSLITLDEDALPAWKKRNNVPEHTGVLELAK 539
>gi|292492511|ref|YP_003527950.1| AMP-dependent synthetase and ligase [Nitrosococcus halophilus Nc4]
gi|291581106|gb|ADE15563.1| AMP-dependent synthetase and ligase [Nitrosococcus halophilus Nc4]
Length = 600
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 133/397 (33%), Positives = 196/397 (49%), Gaps = 56/397 (14%)
Query: 54 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 113
E+ D +AT VYTSGTTG PKGVML+H+N+L S P D FLS LP H
Sbjct: 177 ESADPDALATIVYTSGTTGAPKGVMLSHRNILWNAYSSLQRSPVYPDDLFLSFLPLSHAL 236
Query: 114 ERACGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSA 171
ER GY++ G + Y ++ L +DL +P ++SVP ++E I+ Q+
Sbjct: 237 ERTLGYYLPMMAGACVTYARSITKLAEDLVTIKPTALVSVPRIFER----IRNQLHHELQ 292
Query: 172 ARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLL 231
R + RAL R++ A G+ Q+ +Y W PL LL
Sbjct: 293 ERTPLERALFRLTVA--------AGWRQFNYQQGQAY--------WH--------PLCLL 328
Query: 232 A---EKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAA 287
A + LV +++ + +G + V GG L + A+G+ + GYGLTE+SPVI+
Sbjct: 329 APLLQPLVGRRVLAQLGGRLRVVVCGGAPLAFGVSRELLALGLPLIQGYGLTEASPVISG 388
Query: 288 RRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQA 347
N SVG P+ E++I E NE+L VR VM GY+ NP AT +
Sbjct: 389 NSLDKNDPKSVGTPLQDVEVRI--GEHNELL---------VRSPGVMLGYWDNPKATAKT 437
Query: 348 LDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALR 407
+D++GWL+TGD ++R G + + GR K+ IVL+ GE + P E+E A
Sbjct: 438 IDQEGWLHTGD-----------QARIEQGRIYITGRIKEIIVLANGEKIPPGEMEAAIGA 486
Query: 408 SSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSI 444
L Q++VIG+ + A+IV + E A L++
Sbjct: 487 DHLFDQVMVIGEGKPYLSALIVLNPEHWTKFAHDLNL 523
>gi|304393630|ref|ZP_07375558.1| AMP-binding enzyme [Ahrensia sp. R2A130]
gi|303294637|gb|EFL89009.1| AMP-binding enzyme [Ahrensia sp. R2A130]
Length = 620
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 132/456 (28%), Positives = 205/456 (44%), Gaps = 61/456 (13%)
Query: 24 VFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGS----DDIATYVYTSGTTGNPKGVML 79
V D++++LGR S K ++E I + DD A VYTSGTTG PKG +
Sbjct: 169 VMFLDQLMELGR--------SAATEKPQRFEEIVAATKPDDTAIMVYTSGTTGMPKGATI 220
Query: 80 THKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYF--IFSRGIELMYTAVRNLK 137
TH NLL+ + + P GD+ + LP H+ ER F I R + +
Sbjct: 221 THANLLYSVAAGATAAPLYEGDEQICFLPLCHILERVFSGFSPIAFRTRLNFAESPETVF 280
Query: 138 DDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGF 197
D+LQ PH ++VP ++E +YS R I A +RIY+
Sbjct: 281 DNLQEVSPHVFVAVPRLWEKIYS-----------------RVTILSQEATPLQRRIYDA- 322
Query: 198 CLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKA--GVSGGG 255
+ ++ VA + + + L+ E +V++ ++ +G+ + G SG
Sbjct: 323 AIANGTRRVELEVA------GKPLPFGVRLKELIYEYVVFRNLRRMLGLDRLRRGASGAA 376
Query: 256 SLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETN 315
+ + ++ AIGV V GYG+TESS VI+ N +G+VG PI+ EI+I D
Sbjct: 377 PIAPQLLSWFNAIGVNVLEGYGMTESSGVISLNATGSNKVGTVGRPIDGAEIRIAD---- 432
Query: 316 EVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCG 375
G ++ R + GY P T + EDGWL TGDIG +
Sbjct: 433 -------DGEIQYRAGNMFAGYLNLPEKTAETFSEDGWLRTGDIGHLDED---------- 475
Query: 376 GVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 435
G L + GR KD I+ + G+N+ P E+E S +I V+IG ++ A+++ D+E V
Sbjct: 476 GYLTITGRLKDIIITAGGKNITPAEIENRLKFSPMITDAVIIGDKRKFLSALVMIDQENV 535
Query: 436 LMAAKRLSIVHADASELSKEKTISLLYGELRKWTSK 471
A+ I D L + L G + + +K
Sbjct: 536 EKFAQDRRIPFNDFQSLCAATEVRDLIGSIVEDVNK 571
>gi|262166521|ref|ZP_06034258.1| long-chain-fatty-acid--CoA ligase [Vibrio mimicus VM223]
gi|262026237|gb|EEY44905.1| long-chain-fatty-acid--CoA ligase [Vibrio mimicus VM223]
Length = 601
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 134/435 (30%), Positives = 206/435 (47%), Gaps = 55/435 (12%)
Query: 54 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 113
E DD+ T +YTSGTTG PKGVML ++N+ Q+ + D L LP HV+
Sbjct: 173 EQADFDDLFTLIYTSGTTGTPKGVMLDYRNIGAQLEGHDQRLNLTQDDVSLCFLPLSHVF 232
Query: 114 ERACGYFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAA 172
ERA ++ +G Y V +++D L +P M +VP YE ++S I +++ +
Sbjct: 233 ERAWTAYVLYKGATNCYLHDVSHVRDALGEVRPTVMCAVPRFYEKIFSAIHEKVAKAPFI 292
Query: 173 RRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLA 232
R+V+ F + C + Q+QPS+L L H LA
Sbjct: 293 RKVL--------FTWAVNMGAKMAVC-RQQQRQPSWL---------------LKQNHQLA 328
Query: 233 EKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPT 291
+KLV K+++ +G + GG L I F+ AIG+ V++GYG+TE++ I+
Sbjct: 329 DKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTATISCWDDY 388
Query: 292 CNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDED 351
S+G + ++KI E NE+L VRG VM+GY+K T ++ DE
Sbjct: 389 SFNPDSIGLSMPGAQVKI--GENNEIL---------VRGPMVMRGYYKLEKETAESFDEH 437
Query: 352 GWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLI 411
G+L TGD G I + G L + R K+ + S G+ + P +E A + I
Sbjct: 438 GFLKTGDAGHIDEN----------GNLFITDRIKELMKTSGGKYIAPQVIEGAIGKDHFI 487
Query: 412 RQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLLYG 463
QI VI ++ A+IVP + + AK L+I + D EL K EK ++ L
Sbjct: 488 EQIAVIADTRKFVSALIVPCFDSLEEYAKELNIKYHDRLELIKHSQVLEMFEKRVNELQK 547
Query: 464 ELRKWTSKCSFQIGP 478
EL K+ F++ P
Sbjct: 548 ELAKFEQVKKFKLLP 562
>gi|416893219|ref|ZP_11924505.1| long chain fatty acid CoA ligase [Aggregatibacter aphrophilus ATCC
33389]
gi|347814247|gb|EGY30897.1| long chain fatty acid CoA ligase [Aggregatibacter aphrophilus ATCC
33389]
Length = 578
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 131/433 (30%), Positives = 202/433 (46%), Gaps = 61/433 (14%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 118
+D+ T +YTSGTTG PKGVML + NL HQ+++ + ++ D LS LP H++ERA
Sbjct: 160 EDLFTLIYTSGTTGEPKGVMLDYANLAHQLKAHDQALKVDDSDVSLSFLPLSHIFERAWV 219
Query: 119 YFIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV- 176
++ RG Y N ++ L +P M +VP YE +Y+ I ++ + R+ +
Sbjct: 220 AYVLHRGATNCYIEDTNQVRSALTEIRPTLMCAVPRFYEKIYTAILDKVHNAPQLRQWIF 279
Query: 177 --ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEK 234
A A+ R F L++ QK I +L + LA K
Sbjct: 280 HWAMAIGRQHFD-----------ILSKGQK----------------IGFLLKQQYALANK 312
Query: 235 LVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCN 293
LV K+++ +G + GG L I LF+ +IG+ +++GYG+TE++ ++
Sbjct: 313 LVLGKLRALLGGRIRMMPCGGAKLEPTIGLFFHSIGLNIKLGYGMTETTATVSCWDDVNF 372
Query: 294 VLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGW 353
S+G + E+KI E NE+L VRG VM+GY+K P T +A DG+
Sbjct: 373 NANSIGSLMPGAEVKI--GENNEIL---------VRGGMVMKGYYKKPQETAEAFTADGF 421
Query: 354 LNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQ 413
L TGD G G L + R K+ + S G+ + P LE + I Q
Sbjct: 422 LKTGDAG----------EFDANGNLYITDRIKELMKTSNGKYIAPQVLESKIGKDKFIEQ 471
Query: 414 IVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLLYGEL 465
I VI ++ A+IVP + AK+++I + D EL K E+ I+ L EL
Sbjct: 472 IAVIADAKKYVSALIVPCYTALEEYAKQVNIKYQDRLELLKNSEIIQMLERRINDLQKEL 531
Query: 466 RKWTSKCSFQIGP 478
W F + P
Sbjct: 532 AGWEQIKRFTLLP 544
>gi|72161435|ref|YP_289092.1| long-chain fatty-acid-CoA ligase [Thermobifida fusca YX]
gi|71915167|gb|AAZ55069.1| long-chain fatty-acid-CoA ligase [Thermobifida fusca YX]
Length = 598
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 134/427 (31%), Positives = 201/427 (47%), Gaps = 79/427 (18%)
Query: 28 DEIIDLGRESRKAF----SDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKN 83
D I+ + +S AF +D D+ + G DD+AT +YTSGTTG PKG LT +N
Sbjct: 143 DRIVQIESDSFPAFVATGADVADSVVEERRAATGLDDLATLIYTSGTTGRPKGCELTQRN 202
Query: 84 LLHQIRS-----LYDIVPAENGDKFLSMLPPWHVYER----AC-------GYFIFSRGIE 127
L + S + D+ E G L LP H R C G+F S G +
Sbjct: 203 LAFDVMSVNSGPMKDVFTME-GRSTLLFLPLAHSLARIIQVGCVETKTVMGHFP-STGPD 260
Query: 128 LMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAY 187
L+ D L ++P ++++VP V+E +Y+ +++ S + R + AY
Sbjct: 261 LL--------DALASFRPMFLLAVPRVFEKVYNKAEQKAIASGKGD--IFRKAAETAIAY 310
Query: 188 TAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIG-I 246
+ K + G L R+ A+ LVY+KI +A+G
Sbjct: 311 S--KALDTGKVS----------------LGLRLKRAVF-------SLLVYRKILAAVGGQ 345
Query: 247 SKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTE 306
+K VSGG +L + F+ IG+ V GYGLTE+S A P N +G+VG PI T
Sbjct: 346 AKYAVSGGSALGERLGHFFRGIGLTVLEGYGLTETSAPTTANAPDTNKIGTVGRPIPGTS 405
Query: 307 IKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHH 366
I+I D G + V+G VM+GY+ NP ATK+A EDGW +GDIG +
Sbjct: 406 IRIAD-----------DGEILVKGDNVMRGYWNNPKATKEAFTEDGWYRSGDIGELDEE- 453
Query: 367 SRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGA 426
G L + GR K+ IV + G+NV P +E+ +++ Q +V+G +++ A
Sbjct: 454 ---------GFLRITGRKKEIIVTAGGKNVAPAVIEDRIRSHAIVSQCMVVGDNRKFVAA 504
Query: 427 IIVPDKE 433
+I D E
Sbjct: 505 LITIDPE 511
>gi|227545849|ref|ZP_03975898.1| long-chain acyl-CoA synthetase (AMP-forming) [Bifidobacterium
longum subsp. longum ATCC 55813]
gi|227213965|gb|EEI81804.1| long-chain acyl-CoA synthetase (AMP-forming) [Bifidobacterium
longum subsp. infantis ATCC 55813]
Length = 607
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 138/477 (28%), Positives = 224/477 (46%), Gaps = 93/477 (19%)
Query: 45 NDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNL----LHQIRSLYDIVPAENG 100
+D + + T+ +DD+AT VYTSG+TGNPKG LTHKN + ++L+++V ++
Sbjct: 168 SDEELNERVATVRADDLATIVYTSGSTGNPKGAELTHKNFVSITISASQALHEVV-LDDH 226
Query: 101 DKFLSMLPPWHVYERACGYFIFSR--GIELMYTAVRNLKDDLQRYQPHYMISVPLVYETL 158
+ L LP H + R Y + G+ + L DL+ ++P Y++ VP V+E +
Sbjct: 227 PRLLLFLPLAHCFARFIQYASIASDDGVVGYLPDTKTLLPDLRSFEPTYLLGVPRVFEKV 286
Query: 159 Y--------SGIQKQIFTSSA-ARRVVAR---ALIRISFAYTAFKRIYEGFCLTRNQKQP 206
Y +G + ++F SA A RV +R A + +FA A + YE
Sbjct: 287 YNAASHKAGAGWKGRLFVKSAEAARVWSRKEQAGEQHTFAEIAERAKYE----------- 335
Query: 207 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDL--F 264
LVY+ ++ A+G V+ GG+ P+ +DL F
Sbjct: 336 ---------------------------TLVYRTVRGALGPKIKYVACGGA-PLSLDLAHF 367
Query: 265 YEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKG 324
Y IG+ + GYG+TE++ AA R T NV+G+VG P + I+I D +G
Sbjct: 368 YNGIGLPMIQGYGMTETAAPFAATRVTDNVIGTVGQPAPGSSIRISD-----------EG 416
Query: 325 IVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRA 384
++V+G V +GY P T +A DGWL TGD+ I G +V+ GR
Sbjct: 417 ELQVKGPNVFRGYHNLPEKTAEAFTADGWLRTGDLAEIDDE----------GHIVITGRI 466
Query: 385 KDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVL--MAAKRL 442
KD I+ + G+NV P+ LEE + ++ VV+G + GA++ D E + + A L
Sbjct: 467 KDIIITAGGKNVSPIPLEEEIAKCPIVEHCVVVGDQRPFIGALVTLDPESLALWLPAHGL 526
Query: 443 SIVHADASELSKEKTISLLYGELRKWTSKCSFQIG------PIHVVDEPFTVNFLCL 493
S + + + T + + E++++ K + + V+D FT CL
Sbjct: 527 ST----ETPVDRLATNAAVREEIQQYVDKANATVSRAESVRKFAVLDTQFTQENKCL 579
>gi|315604688|ref|ZP_07879751.1| long-chain-fatty-acid--CoA ligase [Actinomyces sp. oral taxon 180
str. F0310]
gi|315313700|gb|EFU61754.1| long-chain-fatty-acid--CoA ligase [Actinomyces sp. oral taxon 180
str. F0310]
Length = 627
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 124/387 (32%), Positives = 181/387 (46%), Gaps = 53/387 (13%)
Query: 52 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVP---AENGDKFLSMLP 108
+ E + DDI+T VYTSGTTG PKG +L+H+N + + + +P A + L LP
Sbjct: 197 RSEALTKDDISTIVYTSGTTGTPKGTVLSHENFTNLCLNAHAWMPEIAAGTTSRLLLFLP 256
Query: 109 PWHVYERACGYF-IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIF 167
HV+ R F I G+ ++NL DL ++P Y++ VP V E +Y+ +
Sbjct: 257 LAHVFARFLQVFQISGNGVMGHAPNIKNLLPDLASFRPSYLLVVPRVLEKIYNSADTK-- 314
Query: 168 TSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWP 227
S +R V R +++ AY+ EG PS A L
Sbjct: 315 -SRGPKRKVFRWAAKVAIAYSRALDTDEG---------PS---------------ASLKA 349
Query: 228 LHLLAEKLVYKKIQSAI-GISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIA 286
H LA+KLVY++I + G + +SGG L + FY IG+ V GYGLTE+ ++
Sbjct: 350 QHALADKLVYQQIIRLVGGNADYIISGGAPLATWLAHFYRGIGIPVLEGYGLTETVGPVS 409
Query: 287 ARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQ 346
P + +G+VG + KI D G + ++G V QGY +P AT
Sbjct: 410 VNTPRLSKIGTVGPALPPMSFKISD-----------DGEILLKGPSVFQGYNNDPGATAA 458
Query: 347 ALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAAL 406
+DGW TGD+G S G + + GRAKD IV + G+NV P LE
Sbjct: 459 CFTDDGWFRTGDLG----------SLDRDGYVSITGRAKDIIVTAGGKNVTPASLENPMR 508
Query: 407 RSSLIRQIVVIGQDQRRPGAIIVPDKE 433
LI Q++V+G + A+I D E
Sbjct: 509 SHPLISQVLVVGDQRPFVAALITLDAE 535
>gi|262405353|ref|ZP_06081903.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|293370545|ref|ZP_06617097.1| AMP-binding enzyme [Bacteroides ovatus SD CMC 3f]
gi|294644597|ref|ZP_06722350.1| AMP-binding enzyme [Bacteroides ovatus SD CC 2a]
gi|294810339|ref|ZP_06769000.1| AMP-binding enzyme [Bacteroides xylanisolvens SD CC 1b]
gi|336404562|ref|ZP_08585255.1| hypothetical protein HMPREF0127_02568 [Bacteroides sp. 1_1_30]
gi|345507938|ref|ZP_08787579.1| hypothetical protein BSAG_00060 [Bacteroides sp. D1]
gi|229442559|gb|EEO48350.1| hypothetical protein BSAG_00060 [Bacteroides sp. D1]
gi|262356228|gb|EEZ05318.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|292634279|gb|EFF52816.1| AMP-binding enzyme [Bacteroides ovatus SD CMC 3f]
gi|292640034|gb|EFF58299.1| AMP-binding enzyme [Bacteroides ovatus SD CC 2a]
gi|294442447|gb|EFG11253.1| AMP-binding enzyme [Bacteroides xylanisolvens SD CC 1b]
gi|335941466|gb|EGN03319.1| hypothetical protein HMPREF0127_02568 [Bacteroides sp. 1_1_30]
Length = 604
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 131/443 (29%), Positives = 206/443 (46%), Gaps = 54/443 (12%)
Query: 54 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYD-IVPAENGDKFLSMLPPWHV 112
E DD+A +YTSGTTG PKGVML H L Q + D + + D ++ LP HV
Sbjct: 175 ERASYDDLANILYTSGTTGEPKGVMLHHSCYLEQFHTHDDRLTTMSDKDVSMNFLPLTHV 234
Query: 113 YERACGYFIFSRGIEL-MYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSA 171
+E+A Y +G+++ + +++ ++ +P M SVP +E +Y+G+Q++I ++
Sbjct: 235 FEKAWCYLCIHKGVQICINLRPADIQTTIKEIRPTLMCSVPRFWEKVYAGVQEKINETTG 294
Query: 172 ARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLL 231
++ + IR+ RI+ R K P + L +
Sbjct: 295 LKKALMLDAIRVG-------RIH-NLDYLRLGKTPPVMNQL---------------KYKF 331
Query: 232 AEKLVYKKIQSAIGISKAGV--SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARR 289
EK +Y ++ IGI + G ++P I+ F ++G+ + VGYGLTES+ ++
Sbjct: 332 YEKTIYSLLKKTIGIENGNFFPTAGAAVPDEINEFVHSVGINMVVGYGLTESTATVSCTL 391
Query: 290 PTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALD 349
P +GSVG + E+KI E NE+L +RG + +GY+K AT A++
Sbjct: 392 PVGYDIGSVGVVLPGIEVKI--GEDNEIL---------LRGKTITKGYYKKAEATAAAIE 440
Query: 350 EDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSS 409
DGW +TGD G+ G L L R KD S G+ V P LE +
Sbjct: 441 PDGWFHTGDAGYFK-----------NGQLFLTERIKDLFKTSNGKYVAPQALETKLVIDR 489
Query: 410 LIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWT 469
I QI +I ++ A+IVP V A+ I + D EL K I L+ R T
Sbjct: 490 YIDQIAIIADQRKFVSALIVPVYGFVKEYAEEKGIKYKDMEELLKHPKIVGLF-RARIDT 548
Query: 470 SKCSF----QIGPIHVVDEPFTV 488
+ F QI ++ EPF++
Sbjct: 549 LQQQFAHYEQIKRFTLLPEPFSM 571
>gi|323495983|ref|ZP_08101047.1| long-chain acyl-CoA synthetase [Vibrio sinaloensis DSM 21326]
gi|323318945|gb|EGA71892.1| long-chain acyl-CoA synthetase [Vibrio sinaloensis DSM 21326]
Length = 602
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 129/430 (30%), Positives = 202/430 (46%), Gaps = 55/430 (12%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 118
DD+ T +YTSGTTG PKGVML + N+ Q+ + D L LP HV+ERA
Sbjct: 178 DDLLTLIYTSGTTGQPKGVMLDYANIGAQLEGHDQRLSLSEDDVSLCFLPLSHVFERAWT 237
Query: 119 YFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 177
+++ +G Y ++D L +P M +VP YE ++S I +++ + R+V+
Sbjct: 238 FYVLYKGATNCYLQDTMQVRDALADVRPTVMSAVPRFYEKIFSAIHEKVAKAPFIRKVLF 297
Query: 178 RALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVY 237
+ + A + EG + PS+ L H LA+KLV
Sbjct: 298 TWAVNMGAKMAACHQ--EG-------RNPSF---------------ALKKAHGLADKLVL 333
Query: 238 KKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLG 296
K+++ +G + GG L I F+ AIG+ V++GYG+TE++ ++ C
Sbjct: 334 SKLRALLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTATVSCWDDQCFDPD 393
Query: 297 SVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNT 356
S+G + ++KI E NE+L VRG VM+GY+K P T + DE G+L T
Sbjct: 394 SIGMAMPGAQVKI--GENNEIL---------VRGPMVMRGYYKMPEETAKTFDEHGFLKT 442
Query: 357 GDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVV 416
GD G I + G L + R K+ + S G+ + P +E + I QI V
Sbjct: 443 GDAGHIDEN----------GNLFITDRIKELMKTSNGKYIAPQMVEGTIGKDHFIEQIAV 492
Query: 417 IGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLLYGELRKW 468
I ++ A+IVP + + AK L+I + D EL K E+ ++ L EL K+
Sbjct: 493 IADTRKFVSALIVPCYDSLEEYAKELNIKYHDRVELIKHHQIVEMLEQRVNDLQKELAKF 552
Query: 469 TSKCSFQIGP 478
F++ P
Sbjct: 553 EQVKKFKLLP 562
>gi|269956791|ref|YP_003326580.1| AMP-dependent synthetase and ligase [Xylanimonas cellulosilytica
DSM 15894]
gi|269305472|gb|ACZ31022.1| AMP-dependent synthetase and ligase [Xylanimonas cellulosilytica
DSM 15894]
Length = 606
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 135/432 (31%), Positives = 207/432 (47%), Gaps = 57/432 (13%)
Query: 10 KKSSVAPDIVEEIPVFSYDEIID---LGRESRKAFSDSNDARKHYKYETIGSDDIATYVY 66
+ ++ ++ +++P +ID +GR + A +D DA + DDIAT +Y
Sbjct: 127 ENAATVAEVRDQVPACREVLVIDDDAVGRLT-AAGADVPDAEIERRRSLATLDDIATIIY 185
Query: 67 TSGTTGNPKGVMLTHKNLLHQIRSLYDIVP---AENGDKFLSMLPPWHVYERACGYFIFS 123
TSGTTG PKG LTH+N + + VP A G + L LP HV+ R
Sbjct: 186 TSGTTGRPKGAELTHRNFVSLTTNTVPEVPEVFAAPGGRTLLFLPLAHVFARFVEVLAIR 245
Query: 124 RGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIR 182
G L ++ +R L DDL ++P Y+++VP V+E +Y +SA + A ++
Sbjct: 246 SGTVLAHSPDIRTLVDDLGAFRPTYILAVPRVFEKVY---------NSAEQTAAAGGKLK 296
Query: 183 ISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQS 242
I F + A I L K PS WL + H +A+ LVY K+++
Sbjct: 297 I-FRWAAATAIRWSRALD-TAKGPSA------WLSVQ---------HKVADALVYGKLRA 339
Query: 243 AI-GISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHP 301
+ G ++ VSGGG L + FY IG+ V GYGLTE++ RP +G+VG
Sbjct: 340 KLGGQTRYAVSGGGPLGERLGHFYRGIGLTVLEGYGLTETTAPTCVNRPAALRIGTVGLQ 399
Query: 302 INHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGW 361
+ ++I A E+L ++G V +GY NP AT +A D + W TGD+G
Sbjct: 400 LPGCGVRI--APDGEIL---------LKGHHVFRGYHNNPQATAEAFDGE-WFRTGDLGS 447
Query: 362 IAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQ 421
+ G L + GR K+ IV + G+NV P LE+ +L+ Q VV+G ++
Sbjct: 448 LDDE----------GFLRITGRKKEIIVTAAGKNVAPAVLEDRLRAHALVSQCVVVGDNR 497
Query: 422 RRPGAIIVPDKE 433
GA++ D E
Sbjct: 498 PFIGALVTLDPE 509
>gi|298481594|ref|ZP_06999785.1| long-chain-fatty-acid-CoA ligase [Bacteroides sp. D22]
gi|423214977|ref|ZP_17201505.1| hypothetical protein HMPREF1074_03037 [Bacteroides xylanisolvens
CL03T12C04]
gi|298272135|gb|EFI13705.1| long-chain-fatty-acid-CoA ligase [Bacteroides sp. D22]
gi|392692240|gb|EIY85478.1| hypothetical protein HMPREF1074_03037 [Bacteroides xylanisolvens
CL03T12C04]
Length = 604
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 131/443 (29%), Positives = 206/443 (46%), Gaps = 54/443 (12%)
Query: 54 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYD-IVPAENGDKFLSMLPPWHV 112
E DD+A +YTSGTTG PKGVML H L Q + D + + D ++ LP HV
Sbjct: 175 ERASYDDLANILYTSGTTGEPKGVMLHHSCYLEQFHTHDDRLTTMSDKDVSMNFLPLTHV 234
Query: 113 YERACGYFIFSRGIEL-MYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSA 171
+E+A Y +G+++ + +++ ++ +P M SVP +E +Y+G+Q++I ++
Sbjct: 235 FEKAWCYLCIHKGVQICINLRPADIQTTIKEIRPTLMCSVPRFWEKVYAGVQEKINETTG 294
Query: 172 ARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLL 231
++ + IR+ RI+ R K P + L +
Sbjct: 295 LKKALMLDAIRVG-------RIH-NLDYLRLGKTPPVMNQL---------------KYKF 331
Query: 232 AEKLVYKKIQSAIGISKAGV--SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARR 289
EK +Y ++ IGI + G ++P I+ F ++G+ + VGYGLTES+ ++
Sbjct: 332 YEKTIYSLLKKTIGIENGNFFPTAGAAVPDEINEFVHSVGINMVVGYGLTESTATVSCTL 391
Query: 290 PTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALD 349
P +GSVG + E+KI E NE+L +RG + +GY+K AT A++
Sbjct: 392 PVGYDIGSVGVVLPGIEVKI--GEDNEIL---------LRGKTITKGYYKKAEATAAAIE 440
Query: 350 EDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSS 409
DGW +TGD G+ G L L R KD S G+ V P LE +
Sbjct: 441 PDGWFHTGDAGYFK-----------NGQLFLTERIKDLFKTSNGKYVAPQALETKLVIDR 489
Query: 410 LIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWT 469
I QI +I ++ A+IVP V A+ I + D EL K I L+ R T
Sbjct: 490 YIDQIAIIADQRKFVSALIVPVYGFVKEYAEEKGIKYKDMEELLKHPKIVGLF-RARIDT 548
Query: 470 SKCSF----QIGPIHVVDEPFTV 488
+ F QI ++ EPF++
Sbjct: 549 LQQQFAHYEQIKRFTLLPEPFSM 571
>gi|295086341|emb|CBK67864.1| Long-chain acyl-CoA synthetases (AMP-forming) [Bacteroides
xylanisolvens XB1A]
Length = 604
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 131/443 (29%), Positives = 206/443 (46%), Gaps = 54/443 (12%)
Query: 54 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYD-IVPAENGDKFLSMLPPWHV 112
E DD+A +YTSGTTG PKGVML H L Q + D + + D ++ LP HV
Sbjct: 175 ERASYDDLANILYTSGTTGEPKGVMLHHSCYLEQFHTHDDRLTTMSDKDVSMNFLPLTHV 234
Query: 113 YERACGYFIFSRGIEL-MYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSA 171
+E+A Y +G+++ + +++ ++ +P M SVP +E +Y+G+Q++I ++
Sbjct: 235 FEKAWCYLCIHKGVQICINLRPADIQTTIKEIRPTLMCSVPRFWEKVYAGVQEKINETAG 294
Query: 172 ARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLL 231
++ + IR+ RI+ R K P + L +
Sbjct: 295 LKKALMLDAIRVG-------RIH-NLDYLRLGKTPPVMNQL---------------KYKF 331
Query: 232 AEKLVYKKIQSAIGISKAGV--SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARR 289
EK +Y ++ IGI + G ++P I+ F ++G+ + VGYGLTES+ ++
Sbjct: 332 YEKTIYSLLKKTIGIENGNFFPTAGAAVPDEINEFVHSVGINMVVGYGLTESTATVSCTL 391
Query: 290 PTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALD 349
P +GSVG + E+KI E NE+L +RG + +GY+K AT A++
Sbjct: 392 PVGYDIGSVGVVLPGIEVKI--GEDNEIL---------LRGKTITKGYYKKAEATAAAIE 440
Query: 350 EDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSS 409
DGW +TGD G+ G L L R KD S G+ V P LE +
Sbjct: 441 PDGWFHTGDAGYFK-----------NGQLFLTERIKDLFKTSNGKYVAPQALETKLVIDR 489
Query: 410 LIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWT 469
I QI +I ++ A+IVP V A+ I + D EL K I L+ R T
Sbjct: 490 YIDQIAIIADQRKFVSALIVPVYGFVKEYAEEKGIKYKDMEELLKHPKIVGLF-RARIDT 548
Query: 470 SKCSF----QIGPIHVVDEPFTV 488
+ F QI ++ EPF++
Sbjct: 549 LQQQFAHYEQIKRFTLLPEPFSM 571
>gi|258648793|ref|ZP_05736262.1| putative long-chain-fatty-acid--CoA ligase [Prevotella tannerae
ATCC 51259]
gi|260851128|gb|EEX70997.1| putative long-chain-fatty-acid--CoA ligase [Prevotella tannerae
ATCC 51259]
Length = 609
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 125/438 (28%), Positives = 208/438 (47%), Gaps = 59/438 (13%)
Query: 27 YDEIIDLGRESRKAFSDSNDARKHYK--YETIGSDDIATYVYTSGTTGNPKGVMLTHKNL 84
+DE ++L + +AR Y+ + DD+A +YTSGTTGN KGV+LT+K
Sbjct: 155 FDEFLEL--------ASPEEARGEYRQRMKEANYDDMADILYTSGTTGNSKGVILTYKMY 206
Query: 85 LHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGI-ELMYTAVRNLKDDLQRY 143
+ +P D FL+ LP H++ER Y FS G+ + + ++ +Q
Sbjct: 207 RGAVYGNGANLPLSPNDVFLNFLPFTHIFERGWSYLGFSAGVCQAINERPADVLKSMQEI 266
Query: 144 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQ 203
+P M SVP ++E +Y G+Q++I S +R + + + Y + +Q
Sbjct: 267 RPTCMSSVPRLWEKIYQGVQEKIAASPKMQRSLMKDALETGMRY---------WGDYASQ 317
Query: 204 KQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV--SGGGSLPMHI 261
K+P+ ++ + + L ++ VYK ++ +G+ +A + G ++ +
Sbjct: 318 KRPAPMMLKMKYK--------------LYDRTVYKLLRKTLGLDRANFFPTAGAAVSPEV 363
Query: 262 DLFYEAIGVKVQVGYGLTESSPVIAA-RRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA 320
+ F A+G+ + VGYGLTES+ ++ + LGSVG + E+KI NE+L
Sbjct: 364 EKFAHAVGLYMMVGYGLTESTATVSNDHKNERATLGSVGRILPGLELKI--GANNEIL-- 419
Query: 321 GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVL 380
+RG + GY+K SATK LD DGW +TGD G++ G L L
Sbjct: 420 -------LRGDTITPGYYKKESATKAVLDADGWFHTGDAGYMK-----------DGELFL 461
Query: 381 EGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAK 440
R KD S G+ + P ++E I Q VV+ +++ A+IVPD + + A
Sbjct: 462 TERIKDLFKTSNGKYIAPQQIESKMTIDRYIDQCVVVANERKFVSALIVPDFQALEAYAN 521
Query: 441 RLSIVHADASELSKEKTI 458
+ I A EL ++ I
Sbjct: 522 QNGIAFASHEELCRKPEI 539
>gi|383191633|ref|YP_005201761.1| AMP-forming long-chain acyl-CoA synthetase [Rahnella aquatilis CIP
78.65 = ATCC 33071]
gi|371589891|gb|AEX53621.1| AMP-forming long-chain acyl-CoA synthetase [Rahnella aquatilis CIP
78.65 = ATCC 33071]
Length = 598
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 128/436 (29%), Positives = 211/436 (48%), Gaps = 54/436 (12%)
Query: 60 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGY 119
D+ T +YTSGTTG KGVML ++++ Q+R + D L LP HV+ERA +
Sbjct: 180 DLFTLIYTSGTTGEAKGVMLDYRSMATQLRQHEKRLSISEHDVSLCFLPLAHVFERAWSF 239
Query: 120 FIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 178
F+ G + ++ ++D LQ +P M +VP YE ++S I + VAR
Sbjct: 240 FVMHCGAQNVFLRETDRVRDALQAIKPTVMCAVPRFYEKVFSAIHDK----------VAR 289
Query: 179 A-LIRISFAYTAFKRIYEGFCLTRN-QKQPSYLVALIDWLWARIICAILWPLHLLAEKLV 236
A ++ + A + E F + R ++ P +L P H LA+KLV
Sbjct: 290 AGTLKKRLFHWAVAQGKEKFLIERRGERYPFWLT----------------PAHFLADKLV 333
Query: 237 YKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVL 295
KK++ +G + + + G SL ++ LF+E++G+K++ GYGLTE+ +
Sbjct: 334 LKKLRDLLGGNLRFLPAAGASLDDNVILFFESLGLKIKYGYGLTETCATVTCWEEHDFRF 393
Query: 296 GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLN 355
GSVG + E++I E NE ++VRG +++GYF P T + DGW
Sbjct: 394 GSVGTALPEIEVRI--GEENE---------IQVRGPTLLRGYFNKPEETAASFTSDGWFK 442
Query: 356 TGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIV 415
TGD G + G V + E R KD + S G+ + P +E ++ I Q
Sbjct: 443 TGDAGKMDAQ---------GNVFITE-RLKDLMKTSGGKYIAPQRIEGTLVQDRYIEQAA 492
Query: 416 VIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK-EKTISLLYGELRKWTSKCS- 473
VI ++ A+IVPD + + + A+ I + + + L K E+ +SL +LR+ +
Sbjct: 493 VIADERHFVSALIVPDFDVLNVYAQAHHIDYLNRTGLVKNEQILSLFAHQLREIQHDLAG 552
Query: 474 -FQIGPIHVVDEPFTV 488
Q+ ++ +PFT+
Sbjct: 553 FEQVKKFVLLTKPFTM 568
>gi|325962926|ref|YP_004240832.1| AMP-forming long-chain acyl-CoA synthetase [Arthrobacter
phenanthrenivorans Sphe3]
gi|323469013|gb|ADX72698.1| AMP-forming long-chain acyl-CoA synthetase [Arthrobacter
phenanthrenivorans Sphe3]
Length = 602
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 129/408 (31%), Positives = 198/408 (48%), Gaps = 58/408 (14%)
Query: 31 IDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRS 90
+D R++ ++ SD +D K +G D AT +YTSGTTG PKG LTH N + +
Sbjct: 156 LDALRDAGRSVSD-DDLEARRKTARLG--DTATIIYTSGTTGRPKGCELTHGNFVELSDN 212
Query: 91 LYDIVPA---ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPH 146
I+ EN K + LP HV+ R + G + +T ++NL DLQ Y+P
Sbjct: 213 ALAIIGEIVHENA-KTIMFLPLAHVFARFISVLAMAAGTTVAHTPDIKNLLADLQSYEPT 271
Query: 147 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 206
++++VP V+E +Y+ + + I A TA F R + +
Sbjct: 272 FILAVPRVFEKVYNSALTKAEDG-------GKGAIFHKAADTAI-----AFSKARQEGRV 319
Query: 207 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKA-GVSGGGSLPMHIDLFY 265
+ L H L +KLVY K+++A+G A VSGGG L + F+
Sbjct: 320 GLGLKL---------------RHALFDKLVYGKLRAAMGGHVAHAVSGGGPLGERLGHFF 364
Query: 266 EAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGI 325
+ IG++V GYGLTE++ I+ P+ +GSVG P+ +KI S G
Sbjct: 365 QGIGLQVLEGYGLTETTAPISVNTPSLIKIGSVGKPLPGNAVKIA-----------SDGE 413
Query: 326 VKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAK 385
+ +G VM+GY+K P T + D DGW TGDIG + G + + GR K
Sbjct: 414 ILAKGVCVMRGYYKRPDLTAETFD-DGWFRTGDIGRLDED----------GFVWITGRKK 462
Query: 386 DTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 433
+ IV + G+NV P LE+ +L+ Q++V+G ++ GA+I D+E
Sbjct: 463 EIIVTAGGKNVIPALLEDQIRADALVSQVLVVGDNRPFIGALITLDQE 510
>gi|68248553|ref|YP_247665.1| long chain fatty acid CoA ligase [Haemophilus influenzae 86-028NP]
gi|68056752|gb|AAX87005.1| putative long-chain-fatty-acid--CoA ligase [Haemophilus influenzae
86-028NP]
Length = 607
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 124/407 (30%), Positives = 192/407 (47%), Gaps = 47/407 (11%)
Query: 60 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGY 119
D+ T +YTSGTTG PKGVML + NL HQ+ + + + D LS LP H++ERA
Sbjct: 186 DLFTIIYTSGTTGEPKGVMLDYANLAHQLETHDLSLNVTDQDISLSFLPFSHIFERAWAA 245
Query: 120 FIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 178
+I RG L Y N ++ L +P M +VP YE +Y+ + ++ + R+++
Sbjct: 246 YILHRGAILCYLEDTNQVRSALTEIRPTLMCAVPRFYEKIYAAVLDKVQKAPKLRQIMFH 305
Query: 179 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 238
I + + F L N K +L L LA+KLV
Sbjct: 306 WTISVGQKH---------FDLRANNKAIPFL---------------LKKQFALADKLVLS 341
Query: 239 KIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 297
K++ +G K GG L I LF+ AIG+ +++GYG+TE++ ++ S
Sbjct: 342 KLRQLLGGRIKMMPCGGAKLEPAIGLFFHAIGINIKLGYGMTETTATVSCWHDFQFNPNS 401
Query: 298 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 357
+G + E+KI E NE+L VRG VM+GY+K P T QA +DG+L TG
Sbjct: 402 IGTLMPKAEVKI--GENNEIL---------VRGKMVMKGYYKKPEETAQAFTKDGFLKTG 450
Query: 358 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 417
D G G L + R K+ + S G+ + P +E + I QI +I
Sbjct: 451 DAGEFDEQ----------GNLFITDRIKELMKTSNGKYIAPQYIESKIGKDKFIEQIAII 500
Query: 418 GQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGE 464
++ A+IVP + + AK+++I + D EL K I ++ +
Sbjct: 501 ADAKKYVSALIVPCFDSLEEYAKQINIKYHDRLELLKNSDILKMFEQ 547
>gi|82702546|ref|YP_412112.1| AMP-dependent synthetase and ligase [Nitrosospira multiformis ATCC
25196]
gi|82410611|gb|ABB74720.1| AMP-dependent synthetase and ligase [Nitrosospira multiformis ATCC
25196]
Length = 645
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 127/403 (31%), Positives = 201/403 (49%), Gaps = 49/403 (12%)
Query: 58 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERAC 117
S +AT VYTSGTTG PKGVML+H N+L + + D +LS+LP H+ ER
Sbjct: 225 SHALATLVYTSGTTGKPKGVMLSHFNVLWNAEATLQAISGYPEDVYLSLLPLSHMLERTA 284
Query: 118 GYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 175
Y++ G + Y ++++L +DL+ +P ++VP V Y GI+ ++ R
Sbjct: 285 SYYVPLMAGSSVAYARSLKDLPEDLKSVRPGIFVAVPQV----YVGIRNKMNQQVQERGW 340
Query: 176 VARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKL 235
VAR L+ + A +KR F + + Q + LW R+ WP + +L
Sbjct: 341 VARLLLDWTVAL-GWKR----FTVVQAQGKER--------LWQRVA----WP---ILRQL 380
Query: 236 VYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNV 294
V K+ +A G + VSGGG L + ++ +G+ + GYGLTE+SP++ A R N+
Sbjct: 381 VAAKVLAAFGGRLRLAVSGGGPLHADVSRYFIGLGLPLLQGYGLTEASPILTANRLQDNM 440
Query: 295 LGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWL 354
GS G + E++I E E+L R VM GY+ P T+ A+D +GWL
Sbjct: 441 PGSTGSALLGVELRI--GEQRELL---------ARSPGVMLGYWNRPEETRAAIDAEGWL 489
Query: 355 NTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQI 414
+TGD I+ +H + + GR K+ +V S+GE V +LE + ++ L Q+
Sbjct: 490 HTGDQARISDNH-----------VFISGRIKEILVTSSGEKVPSGDLEMSIVQEPLFDQV 538
Query: 415 VVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKT 457
+V+G+ + A+ V +K E A L + + LS T
Sbjct: 539 MVVGEGRPYLTALAVVNKREWRNLASSLGLKTDEVQSLSHSAT 581
>gi|407452010|ref|YP_006723735.1| long-chain acyl-CoA synthetase [Riemerella anatipestifer RA-CH-1]
gi|403312994|gb|AFR35835.1| Long-chain acyl-CoA synthetases (AMP-forming) [Riemerella
anatipestifer RA-CH-1]
Length = 585
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 117/410 (28%), Positives = 200/410 (48%), Gaps = 50/410 (12%)
Query: 60 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAEN--GDKFLSMLPPWHVYERAC 117
D++T +YTSGT+G PKGVMLTH NL+ ++ D +N + L+ LP H++ER+
Sbjct: 167 DLSTILYTSGTSGTPKGVMLTHGNLIDCFQAHTDFFKFKNFENETSLAFLPLSHIFERSW 226
Query: 118 GYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 176
F S+G ++ + + + L+ +P M +VP Y+ +Y +++ + SS+ ++ +
Sbjct: 227 TLFCLSKGAKVSFLENTKLIAHALEEVKPSMMCAVPRFYQKIYGALREMVEKSSSTKKKI 286
Query: 177 ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLV 236
+ I + ++ R K + +AL D +A KLV
Sbjct: 287 FDWALNIGTQCSEYR---------RKGKSVPFGLALKD---------------KIASKLV 322
Query: 237 YKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVL 295
+ KI+ +G + + GG ++ I F++A+G+ + VGYGLTE++ +
Sbjct: 323 FNKIKQKLGGNLWFMPCGGAAISPEILKFFDAMGIHITVGYGLTETTATLTCFPAYNYEY 382
Query: 296 GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLN 355
+ G PI T+IKI E NE+L V+GS VM+GY+ P T +A EDGW
Sbjct: 383 ETAGIPIGDTQIKI--GEHNEIL---------VKGSGVMKGYYNLPEETAKAFTEDGWFR 431
Query: 356 TGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIV 415
TGD G I G L + R KD + S G+ + P +E S+ I+Q +
Sbjct: 432 TGDAGVIE-----------NGTLKITDRIKDLMKTSNGKYITPQVIENILTNSNYIQQAM 480
Query: 416 VIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGEL 465
V+ + + A+IVP+ E + K + + D +E+ + I+ Y ++
Sbjct: 481 VVAEGKPFVTAVIVPNFEALKEKVKAMKLSMTDWNEIVSSEKITQFYHDI 530
>gi|365837168|ref|ZP_09378548.1| AMP-binding enzyme [Hafnia alvei ATCC 51873]
gi|364562746|gb|EHM40580.1| AMP-binding enzyme [Hafnia alvei ATCC 51873]
Length = 600
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 121/443 (27%), Positives = 210/443 (47%), Gaps = 52/443 (11%)
Query: 52 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWH 111
+ E D+ T +YTSGTTG PKGVML + N+ Q+R + + D L LP H
Sbjct: 173 RIEQADMSDLFTLIYTSGTTGEPKGVMLNYTNMGAQLRLHDERLTVTADDVSLCFLPLSH 232
Query: 112 VYERACGYFIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSS 170
V+ERA +++ G + +Y + N +++ +Q +P M +VP YE ++S I +++ +
Sbjct: 233 VFERAWSFYVMHSGAQNVYLSDTNQVREAMQSVKPTVMCAVPRFYEKIFSAIHEKVAQAK 292
Query: 171 AARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHL 230
+R + + I + KR F R +P+ +L +H
Sbjct: 293 WHKRAMFKCAI-----WVGEKR----FLTERAGCKPN---------------VVLSAMHK 328
Query: 231 LAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARR 289
LA+KLV K++ +G + + G L ++ LF++A+G ++ GYG+TE+ ++
Sbjct: 329 LADKLVLSKLRGILGGRVRFLPAAGAKLDDNVILFFQALGANIKYGYGMTETCATVSCWE 388
Query: 290 PTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALD 349
GS+G P+ E++I G + ++VRG VM GY+ P T
Sbjct: 389 ENDFRFGSIGKPLPDVEVRI-----------GQENEIQVRGPIVMCGYYNKPLETAATFT 437
Query: 350 EDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSS 409
EDGWL TGD G + + G L + R KD + S G+ + P +E +
Sbjct: 438 EDGWLKTGDAGALDEN----------GNLFITERLKDLMKTSNGKYIAPQMVEGTLAQDR 487
Query: 410 LIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYG----EL 465
I Q+ VI ++ A+IVP E + AK +++ + D +L + I ++ E+
Sbjct: 488 FIEQVAVIADARKFVSALIVPCFESLEEYAKSINLKYHDRLDLLRHSHIVEMFDQRLREM 547
Query: 466 RKWTSKCSFQIGPIHVVDEPFTV 488
+K +K Q+ ++ E F++
Sbjct: 548 QKGLAKFE-QVKRFTLLPEAFSM 569
>gi|329954188|ref|ZP_08295283.1| AMP-binding enzyme [Bacteroides clarus YIT 12056]
gi|328528165|gb|EGF55145.1| AMP-binding enzyme [Bacteroides clarus YIT 12056]
Length = 593
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 132/443 (29%), Positives = 206/443 (46%), Gaps = 62/443 (13%)
Query: 58 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSM--LPPWHVYER 115
DD+A +YTSGTTG PKGVML H N IR ++DI DK +SM LP HV+E+
Sbjct: 171 DDDLANILYTSGTTGEPKGVMLHHFNYREAIR-IHDIRLTAMTDKDVSMNFLPLTHVFEK 229
Query: 116 ACGYFIFSRGIEL-MYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARR 174
A Y RG+++ + +++ ++ +P M SVP +E +Y+G+Q++I + R+
Sbjct: 230 AWTYLCIHRGVQVCINLRPADIQTTIKEVRPTLMCSVPRFWEKVYAGVQEKIAQETGLRK 289
Query: 175 VVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHL---L 231
+ I++ + ID+L R+ LHL
Sbjct: 290 AMMLDAIKVGKMHN------------------------IDYL--RVGKTPPLMLHLKYKF 323
Query: 232 AEKLVYKKIQSAIGISKAGV--SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARR 289
EK +Y ++ IGI + G ++ I F ++G+ + VGYGLTES+ ++
Sbjct: 324 YEKTIYALLKKTIGIENGNFFPTAGAAVSDEICEFVHSVGINMVVGYGLTESTATVSCFL 383
Query: 290 PTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALD 349
+GSVG + E+KI E NE+L +RG + GY+K P AT A+D
Sbjct: 384 DKGYEIGSVGTVMPDLEVKI--GENNEIL---------LRGKTITTGYYKKPEATAAAID 432
Query: 350 EDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSS 409
+DGW +TGD G++ H L L R KD S G+ + P LE
Sbjct: 433 KDGWFHTGDAGYLKDDH-----------LYLTERIKDLFKTSNGKYISPQALETKLAIDR 481
Query: 410 LIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWT 469
I QI +I ++ A+IVP V AK + + D ++L + + L+ R T
Sbjct: 482 YIDQIAIIADQRKFVSALIVPVYGLVKNYAKEKGLEYKDMADLLQHPKVQALF-RARIDT 540
Query: 470 SKCSF----QIGPIHVVDEPFTV 488
+ F Q+ ++ EPF +
Sbjct: 541 LQQQFANYEQVKRFTLLPEPFNM 563
>gi|238786709|ref|ZP_04630510.1| long-chain-fatty-acid--CoA ligase [Yersinia frederiksenii ATCC
33641]
gi|238725077|gb|EEQ16716.1| long-chain-fatty-acid--CoA ligase [Yersinia frederiksenii ATCC
33641]
Length = 599
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 115/415 (27%), Positives = 201/415 (48%), Gaps = 47/415 (11%)
Query: 52 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWH 111
+ E+ +D+ T +YTSGTTG PKGVML ++N+ Q+ + D LS LP H
Sbjct: 173 RIESCDLNDLFTLIYTSGTTGEPKGVMLDYRNMAAQLYLHDQRLTLTTEDVSLSFLPLSH 232
Query: 112 VYERACGYFIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSS 170
V+ERA +++ G + +Y + + ++ +Q +P M +VP YE ++S I ++ +
Sbjct: 233 VFERAWSFYVMHTGAQNVYISNTDWVRAAMQATKPTVMCAVPRFYEKVFSAIHDKVALAK 292
Query: 171 AARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHL 230
RR++ R I S F+ + G L+ +Q ++
Sbjct: 293 WHRRLLFRWAIGCS--ERQFQSLQNGQTLSPLSRQ----------------------MYK 328
Query: 231 LAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARR 289
LA++LV K++ +G + + G L +I LF+++IG+ ++ GYG+TE+ ++
Sbjct: 329 LADRLVLSKLRGILGGKVRFLPAAGARLDDNIILFFQSIGINIKYGYGMTETCATVSCWE 388
Query: 290 PTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALD 349
GS+G P+ E+++ G++ ++VRG VM+GYF P T ++
Sbjct: 389 EKDFCFGSIGKPLPGIEVRL-----------GAENEIQVRGQIVMRGYFNKPQETAESFT 437
Query: 350 EDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSS 409
EDGWL TGD G + G L + R KD + S G+ + P +E +
Sbjct: 438 EDGWLKTGDAGALDTQ----------GNLFITERLKDLMKTSGGKYIAPQMIEGTLGQDR 487
Query: 410 LIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGE 464
I QI +I ++ A+IVP E + A+ +++ + D EL + I L+ +
Sbjct: 488 FIEQIAIIADTRKFVSALIVPCFESLEEYARSINLKYHDRLELLRHSHIVALFEQ 542
>gi|238752418|ref|ZP_04613895.1| long-chain-fatty-acid--CoA ligase [Yersinia rohdei ATCC 43380]
gi|238709351|gb|EEQ01592.1| long-chain-fatty-acid--CoA ligase [Yersinia rohdei ATCC 43380]
Length = 599
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 127/465 (27%), Positives = 219/465 (47%), Gaps = 58/465 (12%)
Query: 10 KKSSVAPDIVEEIPVFSYDEIIDL-GRESRKAFSDSN---DARKHY----KYETIGSDDI 61
K S+ P + I + D ++DL G E + +D DA + + + + +D+
Sbjct: 126 KLKSLCPQL---IKIIVLDPLVDLRGCEFAQHLADFEQQPDAVQQHLLSARIDACDLNDL 182
Query: 62 ATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFI 121
T +YTSGTTG PKGVML ++N+ Q+ + D LS LP HV+ERA +++
Sbjct: 183 FTLIYTSGTTGEPKGVMLDYRNMAAQLYLHDQRLTLTTDDISLSFLPLSHVFERAWSFYV 242
Query: 122 FSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARAL 180
G + +Y + N ++ +Q QP M +VP YE ++S I ++ + R+ + R
Sbjct: 243 MHTGAQNVYISDTNWVRPAMQAVQPTVMCAVPRFYEKVFSAINDKVALAKWHRQKLFRWA 302
Query: 181 IRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKI 240
+ FK + +G L+ +Q L+ LA +LV K+
Sbjct: 303 V--GCGERKFKSVQDGQALSPLSEQ----------------------LYKLANRLVLSKL 338
Query: 241 QSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVG 299
+ +G + + G L +I LF++AIG+ ++ GYG+TE+ ++ GS+G
Sbjct: 339 RGILGGKVRFLPAAGARLDDNIILFFQAIGINIKYGYGMTETCATVSCWEEKDFRFGSIG 398
Query: 300 HPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDI 359
P+ E+++ G++ ++VRG VM+GYF P T ++ EDGWL TGD
Sbjct: 399 KPLPGIEVRL-----------GAENEIQVRGPIVMRGYFNKPQETAESFTEDGWLKTGDA 447
Query: 360 GWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQ 419
G + G L + R KD + S G+ + P +E + I Q+ +I
Sbjct: 448 GALDSQ----------GNLFITERLKDLMKTSGGKYIAPQMIEGTLGQDRFIEQVAIIAD 497
Query: 420 DQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGE 464
++ A+IVP E + A+ +++ + D EL + I L+ +
Sbjct: 498 TRKFVSALIVPCFESLEEYARSINLKYHDRFELLRHSHIVSLFEQ 542
>gi|386265628|ref|YP_005829120.1| long-chain-fatty-acid--CoA ligase (Long-chain acyl-CoA synthetase)
(LACS) [Haemophilus influenzae R2846]
gi|309972864|gb|ADO96065.1| Probable long-chain-fatty-acid--CoA ligase (Long-chain acyl-CoA
synthetase) (LACS) [Haemophilus influenzae R2846]
Length = 607
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 124/407 (30%), Positives = 192/407 (47%), Gaps = 47/407 (11%)
Query: 60 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGY 119
D+ T +YTSGTTG PKGVML + NL HQ+ + + + D LS LP H++ERA
Sbjct: 186 DLFTIIYTSGTTGEPKGVMLDYANLAHQLETHDLSLNVTDQDISLSFLPFSHIFERAWAA 245
Query: 120 FIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 178
+I RG L Y N ++ L +P M +VP YE +Y+ + ++ + R+++
Sbjct: 246 YILHRGAILCYLEDTNQVRSALTEIRPTLMCAVPRFYEKIYAAVLDKVQKAPKLRQIMFH 305
Query: 179 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 238
I + + F L N K +L L LA+KLV
Sbjct: 306 WTISVGQKH---------FDLRANNKAIPFL---------------LKKQFALADKLVLS 341
Query: 239 KIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 297
K++ +G K GG L I LF+ AIG+ +++GYG+TE++ ++ S
Sbjct: 342 KLRQLLGGRIKMMPCGGAKLEPAIGLFFHAIGINIKLGYGMTETTATVSCWHDFQFNPNS 401
Query: 298 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 357
+G + E+KI E NE+L VRG VM+GY+K P T QA +DG+L TG
Sbjct: 402 IGTLMPKAEVKI--GENNEIL---------VRGKMVMKGYYKKPEETAQAFTKDGFLKTG 450
Query: 358 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 417
D G G L + R K+ + S G+ + P +E + I QI +I
Sbjct: 451 DAGEFDEQ----------GNLFITDRIKELMKTSNGKYIAPQYIESKIGKDKFIEQIAII 500
Query: 418 GQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGE 464
++ A+IVP + + AK+++I + D EL K I ++ +
Sbjct: 501 ADAKKYVSALIVPCFDSLEEYAKQINIKYHDRLELLKNSDILKMFEQ 547
>gi|342904876|ref|ZP_08726672.1| Putative long-chain-fatty-acid--CoA ligase [Haemophilus
haemolyticus M21621]
gi|341952332|gb|EGT78862.1| Putative long-chain-fatty-acid--CoA ligase [Haemophilus
haemolyticus M21621]
Length = 602
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 125/407 (30%), Positives = 191/407 (46%), Gaps = 47/407 (11%)
Query: 60 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGY 119
D+ T +YTSGTTG PKGVML + NL HQ+ + + + D LS LP H++ERA
Sbjct: 178 DLFTIIYTSGTTGEPKGVMLDYANLAHQLEAHDLSLNVTDQDVSLSFLPFSHIFERAWAA 237
Query: 120 FIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 178
+I RG L Y N ++ L +P M +VP YE +Y+ + ++ + R+++
Sbjct: 238 YILHRGAILCYLEDTNQVRSALTEIRPTLMCAVPRFYEKIYAAVLDKVQKAPKLRQIMFH 297
Query: 179 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 238
I + + F L N K +L L LA+KLV
Sbjct: 298 WAISVGQKH---------FDLRANNKTVPFL---------------LKKQFALADKLVLS 333
Query: 239 KIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 297
K++ +G K GG L I LF+ AIG+ +++GYG+TE++ ++ S
Sbjct: 334 KLRQLLGGRIKMMPCGGAKLEPAIGLFFHAIGINIKLGYGMTETTATVSCWHDFQFNPNS 393
Query: 298 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 357
+G + E+KI E NE+L VRG VM+GY+K T QA EDG+L TG
Sbjct: 394 IGTLMPKAEVKI--GENNEIL---------VRGGMVMKGYYKKSEETAQAFTEDGFLKTG 442
Query: 358 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 417
D G G L + R K+ + S G+ + P +E + I QI +I
Sbjct: 443 DAGEFDEQ----------GNLFITDRIKELMKTSNGKYIAPQYIESKIGKDKFIEQIAII 492
Query: 418 GQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGE 464
++ A+IVP + + AK+L+I + D EL K I ++ +
Sbjct: 493 ADAKKYVSALIVPCFDSLEEYAKQLNIKYHDRLELLKNSEILKMFEQ 539
>gi|392389526|ref|YP_006426129.1| AMP-forming long-chain acyl-CoA synthetase [Ornithobacterium
rhinotracheale DSM 15997]
gi|390520604|gb|AFL96335.1| AMP-forming long-chain acyl-CoA synthetase [Ornithobacterium
rhinotracheale DSM 15997]
Length = 591
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 142/492 (28%), Positives = 229/492 (46%), Gaps = 83/492 (16%)
Query: 20 EEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVML 79
E +P ++ EI++LG + +S E I DD+ T +YTSGTTG+PKGVML
Sbjct: 142 ENLP--NWKEILELGED------ESLQPEIEKIKEKIQPDDLVTIIYTSGTTGSPKGVML 193
Query: 80 THKNLLHQIRSLYDIVP--AENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNL 136
+HKNLL + +P EN + LS LP HV+ER +G+ + + + +
Sbjct: 194 SHKNLLSNAIDCQERIPEVGENA-RALSFLPVCHVFERTLLNLYQIKGLSIYFAQNLDTI 252
Query: 137 KDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEG 196
+DL+ QP M VP + E +++ +I+ + A V + + S
Sbjct: 253 GEDLKFVQPQIMTVVPRLVEKVFN----KIYETGANAGPVKSKIFKWS------------ 296
Query: 197 FCLTRNQKQPSYLVALIDWLWARIICAILWPL-HLLAEKLVYKKIQSAIGISKAG-VSGG 254
+ LI ++ + W L + +A KL++ K + +G VSG
Sbjct: 297 -------------LDLIKDYDPKVKMPLNWYLKYKVANKLIFSKWREGMGGKMVTLVSGS 343
Query: 255 GSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAAR---RPTCNVLGSVGHPINHTEIKIVD 311
L ++ + A G+ + GYGLTE+SPVI+ R + G+VG + + ++KI D
Sbjct: 344 AKLSEKLNRMFWAAGIPILEGYGLTETSPVISVNCFDRKGFKI-GTVGKIVKNIDVKIAD 402
Query: 312 AETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRS 371
G V V+G V QGY++NP TK+A EDGW TGDIG
Sbjct: 403 -----------DGEVLVKGPCVFQGYYENPELTKEAFTEDGWFKTGDIGEFDE------- 444
Query: 372 RRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPD 431
G+L L R K S G+ + P LE+A R I QI+V+G+ ++ P A+I P+
Sbjct: 445 ----GLLKLTDRKKQIFKTSGGKYIVPAALEDAMKRIPFIEQIMVVGEGKKMPCALIQPN 500
Query: 432 KEEVLMAAKRLSI-VHADASELSK--------EKTISLLYGELRKWTSKCSFQIGPIHVV 482
+ + A++ + + +E++K EK ++ + E +W F++ P
Sbjct: 501 YDFSIKWAEKNGVEIGTTPAEIAKSEAIYKEIEKAMAEINQEFGRWEQIKRFRLTP---- 556
Query: 483 DEPFTVNFLCLA 494
E +T+ CL
Sbjct: 557 -EEWTIENGCLT 567
>gi|301059328|ref|ZP_07200255.1| AMP-binding enzyme [delta proteobacterium NaphS2]
gi|300446557|gb|EFK10395.1| AMP-binding enzyme [delta proteobacterium NaphS2]
Length = 603
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 125/447 (27%), Positives = 215/447 (48%), Gaps = 56/447 (12%)
Query: 20 EEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVML 79
E+ V ++D+I+++GR D + + + +D++ +YTSGTTG PKG ML
Sbjct: 145 EDEMVMTFDDILEMGR----GVLDKDSQPFESRMARVVPEDVSMLIYTSGTTGPPKGAML 200
Query: 80 THKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYER---ACGYFIFSRGIELMYTAVRNL 136
TH+NL+ +++ P ++ D+ LS LP HV+E+ G+ + + + +
Sbjct: 201 THRNLMWMGQAITTENPMDDEDEVLSFLPLCHVFEQLFSVMGHITHGYTVNFIEN-LETV 259
Query: 137 KDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEG 196
D++ P +VP ++E S + IR+S A T KR+ G
Sbjct: 260 TDNMIEVSPTVGYAVPRIWEKYLSAV-----------------YIRMSDA-TRLKRLVFG 301
Query: 197 FCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGS 256
L +K+ S ++ + + L + LA +V++K++ +G + ++ G+
Sbjct: 302 LALKTGKKRASLMMDF------KPVPGTLEFFYNLAHFVVFRKLKERMGFDRMRIAYSGA 355
Query: 257 LPMHIDL--FYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAET 314
P+ D+ F+++IGV + GYG TE + V R G+VG PI TEIKI D
Sbjct: 356 APISPDVLHFFQSIGVNLVEGYGQTEGTGVTCVSRVGKVKFGTVGPPITGTEIKIAD--- 412
Query: 315 NEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRC 374
G + V+ V +GY++NP AT + + +DGWL +GD+G I
Sbjct: 413 --------DGEILVKSPSVFKGYYQNPEATAETI-QDGWLYSGDVGEI----------DV 453
Query: 375 GGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEE 434
G L + R KD IV + G+N+ P +E S I VVIG ++ A+I+ D++
Sbjct: 454 DGYLKITDRKKDIIVTAGGKNITPQYIENKLKFSPYINDAVVIGDQRKFITALIMIDEDN 513
Query: 435 VLMAAKRLSIVHADASELSKEKTISLL 461
V+ A+ + + +L+K I+ L
Sbjct: 514 VVKFAQDNKVQFSTYKDLTKSPEINKL 540
>gi|269955922|ref|YP_003325711.1| AMP-dependent synthetase and ligase [Xylanimonas cellulosilytica
DSM 15894]
gi|269304603|gb|ACZ30153.1| AMP-dependent synthetase and ligase [Xylanimonas cellulosilytica
DSM 15894]
Length = 606
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 131/439 (29%), Positives = 203/439 (46%), Gaps = 55/439 (12%)
Query: 2 RFIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGRES--RKAFSDSNDARKHYKYETIGSD 59
RF ++ + V + +++P +ID G R A + + + + +
Sbjct: 123 RFAVVETSAHAGVVDAVRKDLPTLEDVLVIDSGALDALRTAGAAVDTQEVADRRAAVVAA 182
Query: 60 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPA---ENGDKFLSMLPPWHVYERA 116
D+AT +YTSG+TG PKG LTH N H + D++P G + L LP HV+ R
Sbjct: 183 DLATIIYTSGSTGRPKGAELTHGNFAHVSLNAADVLPEVIDHEGARTLLFLPIAHVFARL 242
Query: 117 CGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 175
S L + V+NL DL +QP ++++VP V+E +Y+ +++ S R++
Sbjct: 243 IQVATLSANTVLGHAPDVKNLVADLGSFQPTFLLAVPRVFEKVYNSAEQKASASKLKRQI 302
Query: 176 VARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKL 235
+ + G +R Q S + A L H LA+KL
Sbjct: 303 F-------------YWAVRTGIAASRAQDTGS-------------VPAALAFQHRLADKL 336
Query: 236 VYKKIQSAIGISKA-GVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNV 294
V K++ A+G VSGG L + F+ +GV V GYGLTE++ A P
Sbjct: 337 VLSKLREAMGGHVVHAVSGGAPLGERLGHFFRGVGVTVLEGYGLTETTAPAAVNLPRSVA 396
Query: 295 LGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWL 354
+G+VG P+ T IKI D G + ++G V +GY P T + L +DGW
Sbjct: 397 IGTVGPPLPGTSIKIDD-----------DGEILIKGPHVFRGYRNQPELTAEVL-QDGWF 444
Query: 355 NTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQI 414
TGD+G + S+GR R + GR K+ IV + G+NV P LE+ L+ Q+
Sbjct: 445 RTGDLGTL---DSQGRLR-------ITGRKKEIIVTAGGKNVAPALLEDRLRSHPLVSQV 494
Query: 415 VVIGQDQRRPGAIIVPDKE 433
VV+G + GA++ D E
Sbjct: 495 VVVGDQRPFIGALVTLDAE 513
>gi|145595792|ref|YP_001160089.1| AMP-dependent synthetase and ligase [Salinispora tropica CNB-440]
gi|145305129|gb|ABP55711.1| AMP-dependent synthetase and ligase [Salinispora tropica CNB-440]
Length = 599
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 127/419 (30%), Positives = 194/419 (46%), Gaps = 58/419 (13%)
Query: 19 VEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVM 78
V +I + + DE++ G + A H +DD+AT VYTSGTTG PKG M
Sbjct: 146 VWQIDLGALDELVTAGESVDPTEIEQRRAAVH-------ADDLATLVYTSGTTGRPKGCM 198
Query: 79 LTHKNLLHQIRSLYDIVPA--ENGDKFLSMLPPWHVYERACGYFIF-SRGIELMYTAVRN 135
LTH+++L + + ++P G L LP H + R + +R +
Sbjct: 199 LTHRSMLADVANAVPVLPNLFGPGASTLLFLPLAHAFARLIQVGVVQARATMAHCPDTND 258
Query: 136 LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYE 195
L LQ +P +++SVP V+E +Y+ KQ +S R+ ARA ++ AY+
Sbjct: 259 LLSRLQTVRPTFVLSVPRVFEKVYNS-AKQKADASGKGRIFARAEA-VAIAYSESLETSS 316
Query: 196 GFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAI-GISKAGVSGG 254
G L + H L ++LVY+K+++A+ G +SGG
Sbjct: 317 GPGLALRVQ------------------------HALFDRLVYRKLRAALGGRCSDAISGG 352
Query: 255 GSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAET 314
L + F+ +GV + GYGLTE+SP +A P +GSVG P+ I+I D
Sbjct: 353 APLGARLGHFFRGVGVVIYEGYGLTETSPAASANLPDAIRIGSVGRPLPGVTIRIDD--- 409
Query: 315 NEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRC 374
G V + G V +GY++N +A+ L DGW TGD+G +
Sbjct: 410 --------DGEVLIAGDLVFKGYWRNEAASADVLTADGWFRTGDLGQL----------DS 451
Query: 375 GGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 433
G L + GR K+ IV + G+NV P LE+ ++ Q VVIG Q A++ D+E
Sbjct: 452 DGYLRITGRKKEIIVTAGGKNVAPAVLEDQVRAHPMVSQCVVIGDRQPFVAALVTVDEE 510
>gi|212715288|ref|ZP_03323416.1| hypothetical protein BIFCAT_00180 [Bifidobacterium catenulatum DSM
16992 = JCM 1194]
gi|212661745|gb|EEB22320.1| hypothetical protein BIFCAT_00180 [Bifidobacterium catenulatum DSM
16992 = JCM 1194]
Length = 607
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 125/463 (26%), Positives = 222/463 (47%), Gaps = 65/463 (14%)
Query: 45 NDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRS----LYDIVPAENG 100
+D + +++ +DD+AT VYTSG+TG PKG L+H+N + R+ L++I+ E+
Sbjct: 168 SDEELEARIDSVHADDLATIVYTSGSTGAPKGAELSHRNFISITRAGSLALHEII-LEDH 226
Query: 101 DKFLSMLPPWHVYERACGYFIFSR--GIELMYTAVRNLKDDLQRYQPHYMISVPLVYETL 158
+ L LP H + R Y + G+ + L DL+ ++P Y++ VP V+E +
Sbjct: 227 PRLLLFLPLAHCFARFIQYASIASDDGVVGYLPDTKTLLPDLRSFEPTYLLGVPRVFEKV 286
Query: 159 YSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWA 218
Y+ ++ R + A + ++ ++ E + + + SY
Sbjct: 287 YNAASRKAGMGWKGRLFLKAA--EAARDWSHMQQAGEKPTMKQTAEHLSY---------- 334
Query: 219 RIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDL--FYEAIGVKVQVGY 276
E VY+ ++ A+G V+ GG+ P+ + L F+ IG+ + GY
Sbjct: 335 --------------EASVYRTVRGALGPRIRYVACGGA-PLDVSLAHFFNGIGLPMIQGY 379
Query: 277 GLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQG 336
G+TE++ AA R T NV+G+VG P + ++I D G ++V+G V +G
Sbjct: 380 GMTETAAPFAANRVTDNVIGTVGQPAPGSSVRISD-----------DGELQVKGPNVFRG 428
Query: 337 YFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENV 396
Y P T +A EDGWL TGD+ I GR + + GR KD I+ + G+NV
Sbjct: 429 YHNLPEKTAEAFTEDGWLKTGDLASI---DDEGR-------ITITGRKKDIIITAGGKNV 478
Query: 397 EPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEK 456
P+ +E+ ++ ++ VV+G ++ GA++ D E +AA S+ + + L +
Sbjct: 479 SPIPMEQEIVKCPIVEHAVVVGDNRPFIGALVTLDLEG--LAAWLPSVGLSADTPLDRIA 536
Query: 457 TISLLYGELRKWTSKCSFQIGPIH------VVDEPFTVNFLCL 493
T++ ++ E++K+ K + + V+D FT CL
Sbjct: 537 TVAAVHDEIQKYVDKANATVSRAESVRKFVVLDTQFTQENKCL 579
>gi|377573521|ref|ZP_09802577.1| long-chain fatty-acid--CoA ligase [Mobilicoccus pelagius NBRC
104925]
gi|377537636|dbj|GAB47742.1| long-chain fatty-acid--CoA ligase [Mobilicoccus pelagius NBRC
104925]
Length = 607
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 127/443 (28%), Positives = 203/443 (45%), Gaps = 51/443 (11%)
Query: 52 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWH 111
K E + D T +YTSGTTG PKGV+LT + ++ + + G++ +S LP H
Sbjct: 183 KEEEVDPDTPVTIIYTSGTTGAPKGVVLTQRAYSRELYVIDTLFGLPRGERNMSFLPLSH 242
Query: 112 VYERACGYFIFSRGIE-LMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSS 170
YER Y + G+E T + + + +P +SVP +YE +Y+G Q+
Sbjct: 243 AYERGWTYCALASGMENCSVTDPKTVAAAMLDIRPATFVSVPRLYEKVYAGAH-QLAGEG 301
Query: 171 AARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHL 230
RR+ AL R+ G + R +++ R + L H
Sbjct: 302 VKRRLFDWAL-RV------------GADVQRRRRE------------GRPVPRTLAARHA 336
Query: 231 LAEKLVYKKIQSAIGISKAGVSGGGS-LPMHIDLFYEAIGVKVQVGYGLTESSPVIAARR 289
LA++LV ++ +G K ++ GG+ L ++ F+ A G+ + GYGLTE++P+++
Sbjct: 337 LADRLVLHNVRDVVGGEKYVMAAGGAPLRQEVEEFFLAAGLPIYQGYGLTETAPLVSCNA 396
Query: 290 PTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALD 349
P G+ G P+ TE++I D ET E+L VRG V GY+ P T +D
Sbjct: 397 PGAVKSGTAGRPVPGTEVRISD-ETGEIL---------VRGDNVTPGYYNRPEETAAVID 446
Query: 350 EDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSS 409
E+GW +TGD+G + G L++ R KD IV G+N+ P +E A
Sbjct: 447 EEGWFHTGDVGHL----------DADGYLLITDRIKDLIVTMQGKNIAPGPIESALTADP 496
Query: 410 LIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWT 469
L+ VVIG + A+I P EE+ A+ EL + Y +L
Sbjct: 497 LVEAAVVIGDGRPYLTALIQPSFEELEHRAREKGWASDSTEELLARGEVEQYYDDLIARV 556
Query: 470 SKCSF---QIGPIHVVDEPFTVN 489
+ S +I ++ EP T++
Sbjct: 557 GRDSARYERIQKFRLLSEPLTMD 579
>gi|251791879|ref|YP_003006599.1| putative long-chain-fatty-acid--CoA ligase-like protein
[Aggregatibacter aphrophilus NJ8700]
gi|247533266|gb|ACS96512.1| putative long-chain-fatty-acid--CoA ligase-like protein
[Aggregatibacter aphrophilus NJ8700]
Length = 595
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 128/430 (29%), Positives = 199/430 (46%), Gaps = 55/430 (12%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 118
+D+ T +YTSGTTG PKGVML + NL HQ+++ + ++ D LS LP H++ERA
Sbjct: 177 EDLFTLIYTSGTTGEPKGVMLDYANLAHQLKAHDQALKVDDSDVSLSFLPLSHIFERAWV 236
Query: 119 YFIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 177
++ RG Y N ++ L +P M +VP YE +Y+ I ++ + R+ +
Sbjct: 237 AYVLHRGAANCYIEDTNQVRSALTEIRPTLMCAVPRFYEKIYTAILDKVHNAPKLRQWIF 296
Query: 178 RALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVY 237
+ I + L + QK I +L + LA KLV
Sbjct: 297 HWAMAIGHQHFD--------ALAKGQK----------------IGFLLKQQYSLANKLVL 332
Query: 238 KKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLG 296
K+++ +G + GG L I LF+ +IG+ +++GYG+TE++ ++
Sbjct: 333 GKLRALLGGRIRMMPCGGAKLEPTIGLFFHSIGLNIKLGYGMTETTATVSCWDDVNFNAN 392
Query: 297 SVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNT 356
S+G + E+KI E NE+L VRG VM+GY+K P T +A DG+L T
Sbjct: 393 SIGSLMPGAEVKI--GENNEIL---------VRGGMVMKGYYKKPQETAEAFTADGFLKT 441
Query: 357 GDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVV 416
GD G G L + R K+ + S G+ + P LE + I QI V
Sbjct: 442 GDAG----------EFDANGNLYITDRIKELMKTSNGKYIAPQVLESKIGKDKFIEQIAV 491
Query: 417 IGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLLYGELRKW 468
I ++ A+IVP + AK+++I + D EL K E+ I+ L EL W
Sbjct: 492 IADAKKYVSALIVPCYTALEEYAKQVNIKYQDRLELLKNSEIIQMLERRINDLQKELAGW 551
Query: 469 TSKCSFQIGP 478
F + P
Sbjct: 552 EQIKRFTLLP 561
>gi|294634995|ref|ZP_06713512.1| putative CoA ligase [Edwardsiella tarda ATCC 23685]
gi|291091594|gb|EFE24155.1| putative CoA ligase [Edwardsiella tarda ATCC 23685]
Length = 603
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 121/411 (29%), Positives = 199/411 (48%), Gaps = 50/411 (12%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDI-VPAENGDKFLSMLPPWHVYERAC 117
DD+ T +YTSGTTG PKGVML ++NL Q+ L+D + + D L LP HV+ERA
Sbjct: 183 DDLFTLIYTSGTTGEPKGVMLDYRNLAAQL-YLHDARLNVSDQDVSLCFLPLSHVFERAW 241
Query: 118 GYFIFSRGIELMYTAVRNL-KDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 176
+++ G + +Y NL ++ +Q +P M +VP YE ++S +Q ++ + RR +
Sbjct: 242 SFYVMHSGAQNVYLHDTNLVREAMQAVRPTMMCAVPRFYEKIFSAVQAKVAQAPWLRRQL 301
Query: 177 ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLV 236
R + F R G R + ++ +H A++LV
Sbjct: 302 FRWAVWC--GEQRFLRERAG----------------------RPLSGMMAAMHRAADRLV 337
Query: 237 YKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVL 295
K++ +G + + G L + LF++A+G+ ++ GYG+TE+ ++
Sbjct: 338 LGKLRDILGGRVRFLPAAGAKLDDQVILFFQALGLNIKYGYGMTETCATVSCWEEHDFRF 397
Query: 296 GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLN 355
GS+G P+ E++I AE NE+ +VRG VM+GYF P T Q+ DGWL
Sbjct: 398 GSIGRPLPGIEVRI--AEENEI---------QVRGPIVMRGYFNKPQETAQSFTADGWLK 446
Query: 356 TGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIV 415
TGD G + G L + R KD + S G+ + P +E R I Q+
Sbjct: 447 TGDAGALDAQ----------GNLFITERLKDLMKTSNGKYIAPQLVEGTLARDRFIEQVA 496
Query: 416 VIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELR 466
VI ++ A+IVP + + A+ +++ + D +L + I ++ ELR
Sbjct: 497 VIADARKFVSALIVPCFDALEEYARSINLKYHDRLDLLRHSHIVEMF-ELR 546
>gi|262192691|ref|ZP_06050831.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae CT 5369-93]
gi|262031430|gb|EEY50028.1| long-chain-fatty-acid--CoA ligase [Vibrio cholerae CT 5369-93]
Length = 601
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 137/466 (29%), Positives = 216/466 (46%), Gaps = 63/466 (13%)
Query: 31 IDLGRESRKAFSDSNDARKHYK--------YETIGSDDIATYVYTSGTTGNPKGVMLTHK 82
IDL + S D A+ H++ E D+ T +YTSGTTG PKGVML ++
Sbjct: 142 IDLKQASCAMHWDEFVAQSHHQDRAPLDALIEQANYHDLFTLIYTSGTTGTPKGVMLDYR 201
Query: 83 NLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQ 141
N+ Q+ + D L LP HV+ERA ++ +G Y V ++++ L
Sbjct: 202 NIGAQLEGHDQRLNLTQEDVSLCFLPLSHVFERAWTAYVLYKGATNCYLQDVAHVREALA 261
Query: 142 RYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTR 201
+P M +VP YE ++S I +++ + R+V+ F + C +
Sbjct: 262 EVRPTVMCAVPRFYEKIFSAIHEKVAKAPLVRKVL--------FTWAVNMGAKMAVC-RQ 312
Query: 202 NQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMH 260
Q+QPS++ L H A+KLV K+++ +G + GG L
Sbjct: 313 QQRQPSWM---------------LKQSHQFADKLVLSKLRALLGGRINFMPCGGAKLDET 357
Query: 261 IDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA 320
I F+ AIG+ V++GYG+TE++ ++ C S+G + ++KI E NE+L
Sbjct: 358 IGRFFHAIGINVKLGYGMTETTATVSCWDDHCFNPDSIGLSMPGAQVKI--GENNEIL-- 413
Query: 321 GSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVL 380
VRG VM+GY+K T ++ DE G+L TGD G I + G L +
Sbjct: 414 -------VRGPMVMRGYYKLDKETAESFDEHGFLKTGDAGHIDEN----------GNLFI 456
Query: 381 EGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAK 440
R K+ + S G+ + P +E A + I QI VI ++ A+IVP + + AK
Sbjct: 457 TDRIKELMKTSGGKYIAPQVIEGAIGKDHFIEQIAVIADTRKFVSALIVPCFDSLEEYAK 516
Query: 441 RLSIVHADASELSK--------EKTISLLYGELRKWTSKCSFQIGP 478
L+I + D EL K EK ++ L EL K+ F++ P
Sbjct: 517 ELNIKYHDRLELIKHSQVLEMFEKRVNELQKELAKFEQVKKFRLLP 562
>gi|322690540|ref|YP_004220110.1| long-chain-fatty acid CoA ligase [Bifidobacterium longum subsp.
longum JCM 1217]
gi|320455396|dbj|BAJ66018.1| putative long-chain-fatty acid CoA ligase [Bifidobacterium longum
subsp. longum JCM 1217]
Length = 607
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 130/465 (27%), Positives = 217/465 (46%), Gaps = 69/465 (14%)
Query: 45 NDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNL----LHQIRSLYDIVPAENG 100
+D + + T+ +DD+AT VYTSG+TGNPKG LTHKN + ++L+++V ++
Sbjct: 168 SDEELNERVATVRADDLATIVYTSGSTGNPKGAELTHKNFVSITISASQALHEVV-LDDH 226
Query: 101 DKFLSMLPPWHVYERACGYFIFSR--GIELMYTAVRNLKDDLQRYQPHYMISVPLVYETL 158
+ L LP H + R Y + G+ + L DL+ ++P Y++ VP V+E +
Sbjct: 227 PRLLLFLPLAHCFARFIQYASIASDDGVVGYLPDTKTLLPDLRSFEPTYLLGVPRVFEKV 286
Query: 159 YSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWA 218
Y+ + R V A + ++ ++ E ++ Y
Sbjct: 287 YNAASHKAGAGWKGRLFVKAA--EAARVWSRKEQAGEQHTFAEIAERAKY---------- 334
Query: 219 RIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDL--FYEAIGVKVQVGY 276
E LVY+ ++ A+G V+ GG+ P+ +DL FY IG+ + GY
Sbjct: 335 --------------ETLVYRTVRGALGPKIKYVACGGA-PLSLDLAHFYNGIGLPMIQGY 379
Query: 277 GLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQG 336
G+TE++ AA R T NV+G+VG P + I+I D +G ++V+G V +G
Sbjct: 380 GMTETAAPFAATRVTDNVIGTVGQPAPGSSIRISD-----------EGELQVKGPNVFRG 428
Query: 337 YFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENV 396
Y P T +A DGWL TGD+ I G +V+ GR KD I+ + G+NV
Sbjct: 429 YHNLPEKTAEAFTADGWLRTGDLAEIDDE----------GHIVITGRIKDIIITAGGKNV 478
Query: 397 EPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVL--MAAKRLSIVHADASELSK 454
P+ LEE + ++ VV+G + GA++ D E + + A LS + + +
Sbjct: 479 SPIPLEEEIAKCPIVEHCVVVGDQRPFIGALVTLDPESLALWLPAHGLST----ETPVDR 534
Query: 455 EKTISLLYGELRKWTSKCSFQIG------PIHVVDEPFTVNFLCL 493
T + + E++++ K + + V+D FT CL
Sbjct: 535 LATNAAVREEIQQYVDKANATVSRAESVRKFAVLDTQFTQENKCL 579
>gi|312133291|ref|YP_004000630.1| acsa2 [Bifidobacterium longum subsp. longum BBMN68]
gi|311772503|gb|ADQ01991.1| AcsA2 [Bifidobacterium longum subsp. longum BBMN68]
Length = 607
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 130/465 (27%), Positives = 217/465 (46%), Gaps = 69/465 (14%)
Query: 45 NDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNL----LHQIRSLYDIVPAENG 100
+D + + T+ +DD+AT VYTSG+TGNPKG LTHKN + ++L+++V ++
Sbjct: 168 SDEELNERVATVRADDLATIVYTSGSTGNPKGAELTHKNFVSITISASQALHEVV-LDDH 226
Query: 101 DKFLSMLPPWHVYERACGYFIFSR--GIELMYTAVRNLKDDLQRYQPHYMISVPLVYETL 158
+ L LP H + R Y + G+ + L DL+ ++P Y++ VP V+E +
Sbjct: 227 PRLLLFLPLAHCFARFIQYASIASDDGVVGYLPDTKTLLPDLRSFEPTYLLGVPRVFEKV 286
Query: 159 YSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWA 218
Y+ + R V A + ++ ++ E ++ Y
Sbjct: 287 YNAASHKAGAGWKGRLFVKAA--EAARVWSRKEQAGEQHTFAEIAERAKY---------- 334
Query: 219 RIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDL--FYEAIGVKVQVGY 276
E LVY+ ++ A+G V+ GG+ P+ +DL FY IG+ + GY
Sbjct: 335 --------------ETLVYRTVRGALGPKIKYVACGGA-PLSLDLAHFYNGIGLPMIQGY 379
Query: 277 GLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQG 336
G+TE++ AA R T NV+G+VG P + I+I D +G ++V+G V +G
Sbjct: 380 GMTETAAPFAATRVTDNVIGTVGQPAPGSSIRISD-----------EGELQVKGPNVFRG 428
Query: 337 YFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENV 396
Y P T +A DGWL TGD+ I G +V+ GR KD I+ + G+NV
Sbjct: 429 YHNLPEKTAEAFTADGWLRTGDLAEIDDE----------GHIVITGRIKDIIITAGGKNV 478
Query: 397 EPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVL--MAAKRLSIVHADASELSK 454
P+ LEE + ++ VV+G + GA++ D E + + A LS + + +
Sbjct: 479 SPIPLEEEIAKCPIVEHCVVVGDQRPFIGALVTLDPESLALWLPAHGLST----ETPVDR 534
Query: 455 EKTISLLYGELRKWTSKCSFQIG------PIHVVDEPFTVNFLCL 493
T + + E++++ K + + V+D FT CL
Sbjct: 535 LATNAAVREEIQQYVDKANATVSRAESVRKFAVLDTQFTQENKCL 579
>gi|305667499|ref|YP_003863786.1| putative long chain fatty-acid CoA ligase [Maribacter sp. HTCC2170]
gi|88709547|gb|EAR01780.1| probable long chain fatty-acid CoA ligase [Maribacter sp. HTCC2170]
Length = 605
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 132/439 (30%), Positives = 203/439 (46%), Gaps = 53/439 (12%)
Query: 7 LWGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYE-TIGSDDIATYV 65
L+ K SS + I ++++DE G ++ D+ + K TI S+D+ T +
Sbjct: 116 LYNKLSSAQKSVPSLIHIYTFDEAS--GNPFWESIFDTESLTEVEKIRRTIKSEDLVTII 173
Query: 66 YTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRG 125
YTSGTTGNPKGVML+H N++H I ++P + G+K +S LP H++ERA + R
Sbjct: 174 YTSGTTGNPKGVMLSHGNIMHVIIKTGALLPTKEGEKVISFLPLCHIFERAVSFAYCYRN 233
Query: 126 IELMYTAVRNL---KDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIR 182
+ + + NL DL +P +VP + E +Y I + +R + +
Sbjct: 234 VSVYFCGTDNLSGPNGDLIDVRPVAFTTVPRLLEKIYEAIYNKGLALEGIKRKLFFWALS 293
Query: 183 ISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQS 242
+S AY +Q A I W +A+KL++ K +
Sbjct: 294 LSDAYEL--------------EQKLSFTAKIKW--------------KIADKLIFSKWRD 325
Query: 243 AIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARR--PTCNVLGSVG 299
A+G + K +G P+ I + A G+ ++ GYGLTE++P + A P VLG+VG
Sbjct: 326 ALGGNIKLIFTGAAPCPLKIMRVFCAAGISIREGYGLTETAPTLTANSIDPNGAVLGTVG 385
Query: 300 HPINHTEIKI--VDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDE-DG--WL 354
I E+ I D NE +G + V G VM GY+K P Q E DG W
Sbjct: 386 TVIEGVELLIDKSDGNYNE-----DEGEILVIGPNVMSGYYKKPEINAQVFKEIDGKKWF 440
Query: 355 NTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQI 414
TGDIG + + L + R K+ + S G+ V P +E LI Q+
Sbjct: 441 CTGDIGKLV------KGPNGQDFLKITDRKKELLKTSGGKYVAPAPIENRIKEDFLIEQM 494
Query: 415 VVIGQDQRRPGAIIVPDKE 433
+V+G Q+ A+IVP +E
Sbjct: 495 MVVGDKQKYVSALIVPAEE 513
>gi|386389632|ref|ZP_10074446.1| AMP-binding enzyme [Haemophilus paraphrohaemolyticus HK411]
gi|385695402|gb|EIG25964.1| AMP-binding enzyme [Haemophilus paraphrohaemolyticus HK411]
Length = 592
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 125/407 (30%), Positives = 195/407 (47%), Gaps = 53/407 (13%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 118
DD+ T +YTSGTTG+PKGVML + NL HQ++S + D LS LP H++ERA
Sbjct: 176 DDLFTLIYTSGTTGDPKGVMLDYANLAHQLQSHDQALNITEQDVSLSFLPLSHIFERAWV 235
Query: 119 YFIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 177
+IF RG Y N ++ L +P M +VP YE +Y+ + ++ + RR +
Sbjct: 236 AYIFHRGATNCYLEDTNQIRQALVETKPTVMCAVPRFYEKIYAAVLDKVEKAPFIRRTL- 294
Query: 178 RALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWL-WARIICAILWPLHLLAEKLV 236
+A A ++ Y+ +R WL W H A+KLV
Sbjct: 295 -----FHWAIQAGEKHYQSAIPSR-------------WLKWQ----------HKWADKLV 326
Query: 237 YKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVL 295
K+++ +G + GG L I F+ ++GV V++GYG+TE++ ++
Sbjct: 327 LSKLRALLGGQVRMMPCGGAKLEPTIGKFFHSLGVNVKLGYGMTETTATVSCWEDHGFNP 386
Query: 296 GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLN 355
S+G + + E+KI E NE+L VRG VM+GY+K P T A DG+L
Sbjct: 387 NSIGKLMPNVEVKI--GENNEIL---------VRGGMVMRGYYKKPEETANAFTADGFLK 435
Query: 356 TGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIV 415
TGD G + + G L + R K+ + S G+ + P +E + I QI
Sbjct: 436 TGDAGEMDEN----------GNLHITDRIKELMKTSNGKYIAPQYIEGKIGKDKFIEQIA 485
Query: 416 VIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLY 462
+I ++ A+IVP + + AK+L+I + D EL K I ++
Sbjct: 486 IIADAKKYVSALIVPCFDSLEEYAKQLNIKYQDRLELIKHSEIIQMF 532
>gi|317482046|ref|ZP_07941071.1| AMP-binding enzyme [Bifidobacterium sp. 12_1_47BFAA]
gi|322688533|ref|YP_004208267.1| long-chain-fatty acid CoA ligase [Bifidobacterium longum subsp.
infantis 157F]
gi|419851292|ref|ZP_14374241.1| AMP-binding enzyme [Bifidobacterium longum subsp. longum 35B]
gi|419852309|ref|ZP_14375196.1| AMP-binding enzyme [Bifidobacterium longum subsp. longum 2-2B]
gi|291517361|emb|CBK70977.1| Long-chain acyl-CoA synthetases (AMP-forming) [Bifidobacterium
longum subsp. longum F8]
gi|316916613|gb|EFV38010.1| AMP-binding enzyme [Bifidobacterium sp. 12_1_47BFAA]
gi|320459869|dbj|BAJ70489.1| putative long-chain-fatty acid CoA ligase [Bifidobacterium longum
subsp. infantis 157F]
gi|386406548|gb|EIJ21550.1| AMP-binding enzyme [Bifidobacterium longum subsp. longum 35B]
gi|386411258|gb|EIJ26003.1| AMP-binding enzyme [Bifidobacterium longum subsp. longum 2-2B]
Length = 607
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 130/465 (27%), Positives = 217/465 (46%), Gaps = 69/465 (14%)
Query: 45 NDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNL----LHQIRSLYDIVPAENG 100
+D + + T+ +DD+AT VYTSG+TGNPKG LTHKN + ++L+++V ++
Sbjct: 168 SDEELNERVATVRADDLATIVYTSGSTGNPKGAELTHKNFVSITISASQALHEVV-LDDH 226
Query: 101 DKFLSMLPPWHVYERACGYFIFSR--GIELMYTAVRNLKDDLQRYQPHYMISVPLVYETL 158
+ L LP H + R Y + G+ + L DL+ ++P Y++ VP V+E +
Sbjct: 227 PRLLLFLPLAHCFARFIQYASIASDDGVVGYLPDTKTLLPDLRSFEPTYLLGVPRVFEKV 286
Query: 159 YSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWA 218
Y+ + R V A + ++ ++ E ++ Y
Sbjct: 287 YNAASHKAGAGWKGRLFVKAA--EAARVWSRKEQAGEQHTFAEIAERAKY---------- 334
Query: 219 RIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDL--FYEAIGVKVQVGY 276
E LVY+ ++ A+G V+ GG+ P+ +DL FY IG+ + GY
Sbjct: 335 --------------ETLVYRTVRGALGPKIKYVACGGA-PLSLDLAHFYNGIGLPMIQGY 379
Query: 277 GLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQG 336
G+TE++ AA R T NV+G+VG P + I+I D +G ++V+G V +G
Sbjct: 380 GMTETAAPFAATRVTDNVIGTVGQPAPGSSIRISD-----------EGELQVKGPNVFRG 428
Query: 337 YFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENV 396
Y P T +A DGWL TGD+ I G +V+ GR KD I+ + G+NV
Sbjct: 429 YHNLPEKTAEAFTADGWLRTGDLAEIDDE----------GHIVITGRIKDIIITAGGKNV 478
Query: 397 EPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVL--MAAKRLSIVHADASELSK 454
P+ LEE + ++ VV+G + GA++ D E + + A LS + + +
Sbjct: 479 SPIPLEEEIAKCPIVEHCVVVGDQRPFIGALVTLDPESLALWLPAHGLST----ETPVDR 534
Query: 455 EKTISLLYGELRKWTSKCSFQIG------PIHVVDEPFTVNFLCL 493
T + + E++++ K + + V+D FT CL
Sbjct: 535 LATNAAVREEIQQYVDKANATVSRAESVRKFAVLDTQFTQENKCL 579
>gi|296129245|ref|YP_003636495.1| AMP-dependent synthetase and ligase [Cellulomonas flavigena DSM
20109]
gi|296021060|gb|ADG74296.1| AMP-dependent synthetase and ligase [Cellulomonas flavigena DSM
20109]
Length = 602
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 122/398 (30%), Positives = 194/398 (48%), Gaps = 55/398 (13%)
Query: 42 SDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRS----LYDIVPA 97
+D D + DD+AT +YTSGTTG PKGV LTH N + R+ L ++V +
Sbjct: 163 ADVPDTEVDRRSALARGDDLATVIYTSGTTGRPKGVELTHGNFVELCRNGAVGLAEVV-S 221
Query: 98 ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYE 156
+ + L +P HV+ R G + + RNL DL +QP Y+++VP V+E
Sbjct: 222 KPTSRTLLFMPLAHVFARFIQVLCVESGAVMGHAPDTRNLLPDLASFQPSYLLAVPRVFE 281
Query: 157 TLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWL 216
+Y+ +++ + +A R + R +++ AY+ +G PS
Sbjct: 282 KVYNSAEQKAGSGAALR--IFRWAAKVAIAYSRALETPDG---------PS--------- 321
Query: 217 WARIICAILWPLHLLAEKLVYKKIQSAIG-ISKAGVSGGGSLPMHIDLFYEAIGVKVQVG 275
A L H LA++LV++K+++ +G ++ VSGG L + FY IGV+V G
Sbjct: 322 ------AALRAQHRLADRLVHRKLRAVLGGRAEFAVSGGAPLGERLGHFYRGIGVQVLEG 375
Query: 276 YGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQ 335
YGLTE++ A RP +G+VG P+ T +++ D + + + G V +
Sbjct: 376 YGLTETTAPTAVNRPGLTKIGTVGPPMPGTSVRVDDDDQ-----------IWIAGPHVFR 424
Query: 336 GYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGEN 395
GY P T + + DGW TGDIG + G L + GR+K+ IV + G+N
Sbjct: 425 GYRHMPEETAETV-VDGWFRTGDIGTLDED----------GYLRITGRSKEIIVTAGGKN 473
Query: 396 VEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 433
V P LE+ L+ Q+VV+G + GA++ D E
Sbjct: 474 VAPAVLEDRLRGHPLVSQVVVVGDQRPFIGALVTLDAE 511
>gi|241767571|ref|ZP_04765237.1| AMP-dependent synthetase and ligase [Acidovorax delafieldii 2AN]
gi|241361563|gb|EER57960.1| AMP-dependent synthetase and ligase [Acidovorax delafieldii 2AN]
Length = 427
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 125/430 (29%), Positives = 214/430 (49%), Gaps = 45/430 (10%)
Query: 65 VYTSGTTGNPKGVMLTHKNLLHQIRSLYD-IVPAENGDKFLSMLPPWHVYERACGYFI-F 122
VYTSGTTG PKGVMLTH+N++ ++++ + IVP + D FLS LP H +ER GY++
Sbjct: 3 VYTSGTTGKPKGVMLTHRNVVSDVKAVLERIVPTAD-DVFLSFLPLSHTFERTGGYYLPM 61
Query: 123 SRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALI 181
+ G + Y +V L +DL+ +P ++SVP +YE +++ + +++ +
Sbjct: 62 AAGSCVAYARSVPLLAEDLKAVRPTVLVSVPRIYERIHAKLLEKLSPTP----------W 111
Query: 182 RISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQ 241
++ A + + FC ++ P+ + W + A+ WP + + LV K +
Sbjct: 112 KMQLYEAAQNKGWARFCASQGLPAPTPDASSQAAGW---MAALPWP---VLQALVAKPLL 165
Query: 242 SAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGH 300
+ G + VSGG L I + +G+ + GYG+TE++PV++ N VG
Sbjct: 166 AQFGGRVRVAVSGGAPLSPTIAKCFLGLGLPLIQGYGMTETAPVVSVNALGDNDPACVGK 225
Query: 301 PINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIG 360
++ E++I D ++VRG VM+GY+K P T + LD +GWL TGD
Sbjct: 226 ALSGVEVRIGDNRE-----------LQVRGPIVMKGYWKRPEDTARILDPEGWLGTGD-- 272
Query: 361 WIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQD 420
++ G + ++GR K+ IV STGE + P +LE A L L+ Q V+G++
Sbjct: 273 ---------QAEIVNGRIYIKGRIKEIIVTSTGEKIPPGDLELALLADPLLEQAFVVGEN 323
Query: 421 QRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSKCSFQIGP-- 478
+ + V + E + A L + A L+ + + K T+ + P
Sbjct: 324 RPFIACVAVVKRGEWVRLAADLGLNPQAADSLNHPSVHRAVLARIEKNTASFARYAVPRA 383
Query: 479 IHVVDEPFTV 488
+H+ EP+T+
Sbjct: 384 VHLTLEPWTI 393
>gi|427384503|ref|ZP_18881008.1| hypothetical protein HMPREF9447_02041 [Bacteroides oleiciplenus YIT
12058]
gi|425727764|gb|EKU90623.1| hypothetical protein HMPREF9447_02041 [Bacteroides oleiciplenus YIT
12058]
Length = 616
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 132/441 (29%), Positives = 210/441 (47%), Gaps = 58/441 (13%)
Query: 58 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSM--LPPWHVYER 115
DD+A +YTSGTTG PKGVML H N + R ++DI + D+ +SM LP HV+E+
Sbjct: 194 DDDLANILYTSGTTGEPKGVMLHHSNYIEAFR-IHDIRLVDMTDQDISMNFLPLTHVFEK 252
Query: 116 ACGYFIFSRGIELMYTAVR--NLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 173
A Y +G+++ +R +++ ++ +P M SVP +E +Y+G+Q++I + +
Sbjct: 253 AWTYLCIYKGVQICIN-LRPVDIQTTIKEIRPTLMCSVPRFWEKVYAGVQEKIAQETGLK 311
Query: 174 RVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAE 233
+ + I++ +I+ R K P ++ L + E
Sbjct: 312 KAMMLDAIKVG-------KIH-NIDYLRKGKTPPLMLHL---------------KYKFYE 348
Query: 234 KLVYKKIQSAIGISKAGV--SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPT 291
K VY ++ IGI + G ++P I F ++G+ + VGYGLTES+ ++ +
Sbjct: 349 KTVYALLKKTIGIENGNFFPTAGAAVPDEICEFVHSVGINMLVGYGLTESTATVSCFLNS 408
Query: 292 CNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDED 351
+GSVG + E+KI E NE+L +RG + +GY+K AT A+D+D
Sbjct: 409 GYEIGSVGTIMPDVEVKI--GEENEIL---------LRGKTITKGYYKKAEATAAAIDKD 457
Query: 352 GWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLI 411
GW +TGD G++ G L L R KD S G+ V P LE I
Sbjct: 458 GWFHTGDAGYLK-----------GDQLYLTERIKDLFKTSNGKYVSPQALETKLAIDRYI 506
Query: 412 RQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSK 471
QI +I ++ A+IVP V AK I + D EL + I L+ R T +
Sbjct: 507 DQIAIIADQRKFVSALIVPVYGYVKEYAKEKGIEYKDMEELLQHPKILGLF-RARIDTLQ 565
Query: 472 CSF----QIGPIHVVDEPFTV 488
F Q+ ++ EPF++
Sbjct: 566 QQFAHYEQVKRFTLLPEPFSM 586
>gi|410867744|ref|YP_006982355.1| AMP-binding enzyme [Propionibacterium acidipropionici ATCC 4875]
gi|410824385|gb|AFV91000.1| AMP-binding enzyme [Propionibacterium acidipropionici ATCC 4875]
Length = 657
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 134/471 (28%), Positives = 223/471 (47%), Gaps = 55/471 (11%)
Query: 22 IPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTH 81
+PV S +++ RE+ +A + DA + DD+A+ +YTSGTTG PKGVM+TH
Sbjct: 182 LPVHSLSDLVSAPREAGEA--ERLDALVDERMALSAGDDVASLIYTSGTTGAPKGVMITH 239
Query: 82 KNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMY-TAVRNLKDDL 140
+ + Q +L + D L LP H E A I S G Y T + + L
Sbjct: 240 RAAMSQPAALDEFFTITASDHSLCFLPLSHALEWAWTMVIISHGCLNTYVTNPKTVASML 299
Query: 141 QRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRI-SFAYTAFKRIYEGFCL 199
+P ++VP +YE Q+ T + + +R IRI ++ +R ++
Sbjct: 300 AEVRPTLFVTVPKLYE--------QVMTVAREKVSDSRLKIRIFDWSLDVGRRWWQ---T 348
Query: 200 TRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGS-LP 258
T ++P + + H +A++LV + ++ A+G K ++ GG+ L
Sbjct: 349 TEAGRRPDVGLRI---------------RHAVADRLVLRAVRDAVGGPKTVLAAGGAPLR 393
Query: 259 MHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVL 318
++ F+ +IG+ + GYGLTESSP+++ P + G+ G P+ ++IK
Sbjct: 394 QEVEEFFASIGLLICQGYGLTESSPLVSFNSPGAHKFGTAGKPLVGSQIK---------- 443
Query: 319 PAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVL 378
+G++G + RG +M+GY+ NP AT + +DGWL+TGDIG + G L
Sbjct: 444 -SGAEGEILYRGPNIMKGYWNNPEATASTI-QDGWLHTGDIGHV----------DDDGYL 491
Query: 379 VLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMA 438
V+ R KD IV G+N+ P +E L L Q V++G ++ ++ P V
Sbjct: 492 VITDRLKDIIVTLNGKNISPQPIEGLLLADPLFEQAVILGDNRPCLTLLVKPSMPHVEEI 551
Query: 439 AKRLSIVHADASELSKEKTISLLYGELRKWTSKC--SFQIGPIHVVDEPFT 487
A+RL + A L + + + + T+K QI + V+ E FT
Sbjct: 552 AERLHLNLALPESLRSPELAEEIRKHVAELTAKLPNQEQIRDLRVLWEDFT 602
>gi|397671022|ref|YP_006512557.1| AMP-binding protein [Propionibacterium propionicum F0230a]
gi|395140893|gb|AFN45000.1| AMP-binding enzyme [Propionibacterium propionicum F0230a]
Length = 595
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 116/367 (31%), Positives = 178/367 (48%), Gaps = 48/367 (13%)
Query: 57 GSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERA 116
G DD+A+ +YTSGTTG+PKGVML H ++ Q ++ ++ D L LP H ERA
Sbjct: 168 GPDDLASIIYTSGTTGDPKGVMLRHSAMIAQKEAIEEMFHFGPEDHSLCFLPLSHALERA 227
Query: 117 CGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 175
I +G Y R + D L + +P ++SVP +YE +++ ++ S R +
Sbjct: 228 WTSIILLKGCMNTYVPDARTVADALVQTKPTLLVSVPKLYEKVFATAHAKVAASGIKRGI 287
Query: 176 VARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKL 235
AL R+ +R Y R ++P+ W W + +A++L
Sbjct: 288 FKWAL-RVG---ARNQRAY------RKGRRPA-------WFWRAQLG--------MADRL 322
Query: 236 VYKKIQSAIGISKAGVS-GGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNV 294
V I+ A+G +KA ++ GG L I+ F+ A+G+ + GYGLTE+SP++ P
Sbjct: 323 VLSSIRVALGGNKAVLACGGAPLRKEIEEFFSAVGMPIYTGYGLTEASPLVTFNSPGGFK 382
Query: 295 LGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWL 354
+G+ G + ++ I G G V RG VM GY+ N AT A+D DGWL
Sbjct: 383 IGTAGRVLKGGQLHI-----------GEHGEVLFRGPNVMAGYWNNEEATAAAIDSDGWL 431
Query: 355 NTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQI 414
+TGD G++ G LV+ R KD IV G+NV P +E L L
Sbjct: 432 HTGDAGYV----------DVDGFLVITDRIKDIIVTLGGKNVAPQPIEGLILADPLFEHA 481
Query: 415 VVIGQDQ 421
V++G ++
Sbjct: 482 VLLGDNR 488
>gi|419847624|ref|ZP_14370791.1| AMP-binding enzyme [Bifidobacterium longum subsp. longum 1-6B]
gi|419854092|ref|ZP_14376884.1| AMP-binding enzyme [Bifidobacterium longum subsp. longum 44B]
gi|386410620|gb|EIJ25398.1| AMP-binding enzyme [Bifidobacterium longum subsp. longum 1-6B]
gi|386418162|gb|EIJ32629.1| AMP-binding enzyme [Bifidobacterium longum subsp. longum 44B]
Length = 607
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 130/465 (27%), Positives = 217/465 (46%), Gaps = 69/465 (14%)
Query: 45 NDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNL----LHQIRSLYDIVPAENG 100
+D + + T+ +DD+AT VYTSG+TGNPKG LTHKN + ++L+++V ++
Sbjct: 168 SDEELNERVATVRADDLATIVYTSGSTGNPKGAELTHKNFVSITISASQALHEVV-LDDH 226
Query: 101 DKFLSMLPPWHVYERACGYFIFSR--GIELMYTAVRNLKDDLQRYQPHYMISVPLVYETL 158
+ L LP H + R Y + G+ + L DL+ ++P Y++ VP V+E +
Sbjct: 227 PRLLLFLPLAHCFARFIQYASIASDDGVVGYLPDTKTLLPDLRSFEPTYLLGVPRVFEKV 286
Query: 159 YSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWA 218
Y+ + R V A + ++ ++ E ++ Y
Sbjct: 287 YNAASHKAGAGWKGRLFVKAA--EAARVWSRKEQAGEQHTFAEIAERAKY---------- 334
Query: 219 RIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDL--FYEAIGVKVQVGY 276
E LVY+ ++ A+G V+ GG+ P+ +DL FY IG+ + GY
Sbjct: 335 --------------ETLVYRTVRGALGPKIKYVACGGA-PLSLDLAHFYNGIGLPMIQGY 379
Query: 277 GLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQG 336
G+TE++ AA R T NV+G+VG P + I+I D +G ++V+G V +G
Sbjct: 380 GMTETAAPFAATRVTDNVIGTVGQPAPGSSIRISD-----------EGELQVKGPNVFRG 428
Query: 337 YFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENV 396
Y P T +A DGWL TGD+ I G +V+ GR KD I+ + G+NV
Sbjct: 429 YHNLPEKTAEAFTADGWLRTGDLAEIDDE----------GHIVITGRIKDIIITAGGKNV 478
Query: 397 EPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVL--MAAKRLSIVHADASELSK 454
P+ LEE + ++ VV+G + GA++ D E + + A LS + + +
Sbjct: 479 SPIPLEEEIAKCPIVEHCVVVGDQRPFIGALVTLDPESLALWLPAHGLST----ETPVDR 534
Query: 455 EKTISLLYGELRKWTSKCSFQIG------PIHVVDEPFTVNFLCL 493
T + + E++++ K + + V+D FT CL
Sbjct: 535 LATNAAVREEIQQYVDKANATVSRAESVRKFAVLDTQFTQENKCL 579
>gi|384202115|ref|YP_005587862.1| long-chain-fatty acid CoA ligase [Bifidobacterium longum subsp.
longum KACC 91563]
gi|338755122|gb|AEI98111.1| long-chain-fatty acid CoA ligase [Bifidobacterium longum subsp.
longum KACC 91563]
Length = 607
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 130/465 (27%), Positives = 217/465 (46%), Gaps = 69/465 (14%)
Query: 45 NDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNL----LHQIRSLYDIVPAENG 100
+D + + T+ +DD+AT VYTSG+TGNPKG LTHKN + ++L+++V ++
Sbjct: 168 SDDELNERVATVRADDLATIVYTSGSTGNPKGAELTHKNFVSITISASQALHEVV-LDDH 226
Query: 101 DKFLSMLPPWHVYERACGYFIFSR--GIELMYTAVRNLKDDLQRYQPHYMISVPLVYETL 158
+ L LP H + R Y + G+ + L DL+ ++P Y++ VP V+E +
Sbjct: 227 PRLLLFLPLAHCFARFIQYASIASDDGVVGYLPDTKTLLPDLRSFEPTYLLGVPRVFEKV 286
Query: 159 YSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWA 218
Y+ + R V A + ++ ++ E ++ Y
Sbjct: 287 YNAASHKAGAGWKGRLFVKAA--EAARVWSRKEQAGEQHTFAEIAERAKY---------- 334
Query: 219 RIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDL--FYEAIGVKVQVGY 276
E LVY+ ++ A+G V+ GG+ P+ +DL FY IG+ + GY
Sbjct: 335 --------------ETLVYRTVRGALGPKIKYVACGGA-PLSLDLAHFYNGIGLPMIQGY 379
Query: 277 GLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQG 336
G+TE++ AA R T NV+G+VG P + I+I D +G ++V+G V +G
Sbjct: 380 GMTETAAPFAATRVTDNVIGTVGQPAPGSSIRISD-----------EGELQVKGPNVFRG 428
Query: 337 YFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENV 396
Y P T +A DGWL TGD+ I G +V+ GR KD I+ + G+NV
Sbjct: 429 YHNLPEKTAEAFTADGWLRTGDLAEIDDE----------GHIVITGRIKDIIITAGGKNV 478
Query: 397 EPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVL--MAAKRLSIVHADASELSK 454
P+ LEE + ++ VV+G + GA++ D E + + A LS + + +
Sbjct: 479 SPIPLEEEIAKCPIVEHCVVVGDQRPFIGALVTLDPESLALWLPAHGLST----ETPVDR 534
Query: 455 EKTISLLYGELRKWTSKCSFQIG------PIHVVDEPFTVNFLCL 493
T + + E++++ K + + V+D FT CL
Sbjct: 535 LATNAAVREEIQQYVDKANATVSRAESVRKFAVLDTQFTQENKCL 579
>gi|443705653|gb|ELU02086.1| hypothetical protein CAPTEDRAFT_224649 [Capitella teleta]
Length = 649
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 132/409 (32%), Positives = 194/409 (47%), Gaps = 55/409 (13%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQI----RSLYDIVPAENGDKFLSMLPPWHVYE 114
D++AT YTSGTTGNPKGV LTH+ LL I S++ IV N D +S LP H++E
Sbjct: 221 DNLATICYTSGTTGNPKGVCLTHRALLSNIASVMMSIHPIVINSN-DSHISYLPLAHMFE 279
Query: 115 RACGYFIFSRGIELMYT--AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAA 172
R I G + ++ VR L +DLQ P +VP L + I ++ +
Sbjct: 280 RLVHLMIVQHGARIGFSRGDVRLLTEDLQALSPTIFPTVP----RLLNRIHDKVLMGVSG 335
Query: 173 RRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLA 232
++ + L ++F+ L R I +W
Sbjct: 336 SKIKS-MLFNLAFS--------RKMALLRQ---------------GVITNTSVW------ 365
Query: 233 EKLVYKKIQSAIGIS-KAGVSGGGSLPMHI-DLFYEAIGVKVQVGYGLTESSPVIAARRP 290
+KLV+ K+Q +G + + G L H+ D A G V GYG TE++ ++ P
Sbjct: 366 DKLVFSKVQKLLGGRVRFCIVGSAPLAAHVLDFTRAAFGCLVTEGYGQTEATAGVSITLP 425
Query: 291 TCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDE 350
+ G VG P+ +K+VD + KG V VRG+ +M GY+K+P TK+A+DE
Sbjct: 426 HEYIPGQVGPPLPCNHVKLVDVPEMDYYAKDGKGEVCVRGTNLMSGYYKDPERTKEAIDE 485
Query: 351 DGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSL 410
DGW++TGD+G P G L + R K L+ GE + P ++E RSSL
Sbjct: 486 DGWVHTGDVGQWMPQ----------GTLKIIDRRKHIFKLAQGEYLAPEKVEGVYTRSSL 535
Query: 411 IRQIVVIGQD-QRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTI 458
+ Q+ V G Q P AI+VPD E + AK+ + D EL + KT+
Sbjct: 536 VAQVFVDGNSLQSFPVAIVVPDPEVLPGWAKKQGL-SGDIQELCENKTV 583
>gi|386833922|ref|YP_006239236.1| FAA1 protein [Pasteurella multocida subsp. multocida str. 3480]
gi|385200622|gb|AFI45477.1| FAA1 protein [Pasteurella multocida subsp. multocida str. 3480]
Length = 606
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 124/410 (30%), Positives = 197/410 (48%), Gaps = 50/410 (12%)
Query: 60 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRS---LYDIVPAENGDKFLSMLPPWHVYERA 116
D+ T +YTSGTTG PKGVML + NL HQ+++ + + D LS LP H++ERA
Sbjct: 179 DLFTLIYTSGTTGEPKGVMLDYANLAHQLKAHDEAFTTLNVSQYDSSLSFLPLSHIFERA 238
Query: 117 CGYFIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 175
++ RG Y N +++ L +P M +VP YE +Y+ + ++ + RR+
Sbjct: 239 WVAYVLHRGAVNCYLEDTNRVREALSEIRPTLMCAVPRFYEKIYTAVWDKVQKAPLFRRM 298
Query: 176 VARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKL 235
+ I + F+ I ++K+P I +L + LA+KL
Sbjct: 299 IFNWAIAV--GQKRFQFI--------SKKKP--------------IPFVLRQQYALADKL 334
Query: 236 VYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNV 294
V K++ +G + GG L +I LF+ +IG+ V++GYG+TE++ ++
Sbjct: 335 VLSKLRQLLGGRIRMMPCGGAKLEPNIGLFFHSIGINVKLGYGMTETTATVSCWEEGHFE 394
Query: 295 LGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWL 354
S+G + E+KI E NE+L VRG VM+GY+K P T + EDG+L
Sbjct: 395 PNSIGTLMPGAEVKI--GENNEIL---------VRGGMVMRGYYKKPQETADSFTEDGFL 443
Query: 355 NTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQI 414
TGD G P G L + R K+ + S G+ + P +E + I QI
Sbjct: 444 KTGDAGEFDPQ----------GNLYITDRIKELMKTSNGKYIAPQYIETKVGKDKFIEQI 493
Query: 415 VVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGE 464
VI ++ A+IVP + AK+L+I + D EL K I ++ +
Sbjct: 494 AVIADAKKYVSALIVPCFNSLEEYAKQLNIKYHDRLELIKHSDILQMFEQ 543
>gi|23335867|ref|ZP_00121099.1| COG1022: Long-chain acyl-CoA synthetases (AMP-forming)
[Bifidobacterium longum DJO10A]
gi|189439874|ref|YP_001954955.1| long-chain acyl-CoA synthetase [Bifidobacterium longum DJO10A]
gi|189428309|gb|ACD98457.1| Long-chain acyl-CoA synthetase [Bifidobacterium longum DJO10A]
Length = 607
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 130/465 (27%), Positives = 218/465 (46%), Gaps = 69/465 (14%)
Query: 45 NDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLH----QIRSLYDIVPAENG 100
+D + + T+ +DD+AT VYTSG+TGNPKG LTHKN + ++L+++V ++
Sbjct: 168 SDEELNERVATVRADDLATIVYTSGSTGNPKGAELTHKNFVSITITASQALHEVV-LDDH 226
Query: 101 DKFLSMLPPWHVYERACGYFIFSR--GIELMYTAVRNLKDDLQRYQPHYMISVPLVYETL 158
+ L LP H + R Y + G+ ++L DL+ ++P Y++ VP V+E +
Sbjct: 227 PRLLLFLPLAHCFARFIQYASIASDDGVVGYLPDTKSLLPDLRSFEPTYLLGVPRVFEKV 286
Query: 159 YSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWA 218
Y+ + R V A + ++ ++ E ++ Y
Sbjct: 287 YNAASHKAGAGWKGRLFVKAA--EAARVWSRKEQAGEQHTFAEIAERAKY---------- 334
Query: 219 RIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDL--FYEAIGVKVQVGY 276
E LVY+ ++ A+G V+ GG+ P+ +DL FY IG+ + GY
Sbjct: 335 --------------ETLVYRTVRGALGPKIKYVACGGA-PLSLDLAHFYNGIGLPMIQGY 379
Query: 277 GLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQG 336
G+TE++ AA R T NV+G+VG P + I+I D +G ++V+G V +G
Sbjct: 380 GMTETAAPFAATRVTDNVIGTVGQPAPGSSIRISD-----------EGELQVKGPNVFRG 428
Query: 337 YFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENV 396
Y P T +A DGWL TGD+ I G +V+ GR KD I+ + G+NV
Sbjct: 429 YHNLPEKTAEAFTADGWLRTGDLAEIDDE----------GHIVITGRIKDIIITAGGKNV 478
Query: 397 EPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVL--MAAKRLSIVHADASELSK 454
P+ LEE + ++ VV+G + GA++ D E + + A LS + + +
Sbjct: 479 SPIPLEEEIAKCPIVEHCVVVGDQRPFIGALVTLDPESLALWLPAHGLST----ETPVDR 534
Query: 455 EKTISLLYGELRKWTSKCSFQIG------PIHVVDEPFTVNFLCL 493
T + + E++++ K + + V+D FT CL
Sbjct: 535 LATNAAVREEIQQYVDKANATVSRAESVRKFAVLDTQFTQENKCL 579
>gi|332291599|ref|YP_004430208.1| AMP-dependent synthetase and ligase [Krokinobacter sp. 4H-3-7-5]
gi|332169685|gb|AEE18940.1| AMP-dependent synthetase and ligase [Krokinobacter sp. 4H-3-7-5]
Length = 598
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 124/407 (30%), Positives = 198/407 (48%), Gaps = 51/407 (12%)
Query: 60 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGY 119
D+A+ +YTSGTTG PKGVM+ H N+ + + + + D LS LP H++ER+ +
Sbjct: 180 DLASIIYTSGTTGEPKGVMIGHANIGASLAAHKYELDISDQDVSLSFLPLSHIFERSWVF 239
Query: 120 FIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 178
F GIE+ + + + + L+ +P M +VP ++E +Y+ IQ + ++ ++ +A
Sbjct: 240 FCLHMGIEVYFNQDPKKIAEVLKEVRPTVMCTVPRIFEKIYAAIQAKTKEATPTKQKLAS 299
Query: 179 -ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVY 237
AL Y +R+ + L N K + +A+K+V
Sbjct: 300 WALSVGDNYYNQHQRLEKKVPLGLNLK------------------------YKIADKIVL 335
Query: 238 KKIQSAIGISKAGVSGGGSLPMHIDL--FYEAIGVKVQVGYGLTESSPVIAARRPTCNVL 295
K+++ G + GG+ P+ D+ F+ + G+ V+ GYGLTE++ ++ T
Sbjct: 336 SKLRALFGGRIKFMPCGGA-PLAADMVSFFHSFGLDVKCGYGLTETTATVSLFGYTNFEF 394
Query: 296 GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLN 355
S G I TEIKI D +E+L V+G VMQGY+K P AT Q +DGW
Sbjct: 395 NSAGKSIEGTEIKIGD--NDEIL---------VKGPGVMQGYYKKPEATAQVF-KDGWFC 442
Query: 356 TGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIV 415
TGD G + H G L + R KD + S G+ + P +LE A + SLI Q+
Sbjct: 443 TGDAGRLDEH----------GNLYITDRIKDLMKTSGGKYIAPQKLETALISDSLIEQLA 492
Query: 416 VIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLY 462
VIG Q+ A+ VP+ E + A +I EL K+ + L+
Sbjct: 493 VIGDQQKYVTALAVPNFENLKKYANEHNISFESMEELIKDNKVVALF 539
>gi|209696156|ref|YP_002264086.1| AMP-binding protein [Aliivibrio salmonicida LFI1238]
gi|208010109|emb|CAQ80434.1| putative AMP-binding enzyme [Aliivibrio salmonicida LFI1238]
Length = 611
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 131/447 (29%), Positives = 207/447 (46%), Gaps = 55/447 (12%)
Query: 40 AFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAEN 99
A ++S+ ++ +T DD+ T +YTSGTTG PKGVML + N+ Q+ +
Sbjct: 167 AANESHQEELTHRLDTAEMDDLLTLIYTSGTTGEPKGVMLDYTNIGSQLEGHNTNLALTE 226
Query: 100 GDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRNL-KDDLQRYQPHYMISVPLVYETL 158
D L LP HV+ERA +++ +G Y NL KD L +P M +VP YE +
Sbjct: 227 KDVSLCFLPLSHVFERAWTFYVLYKGAINCYLPNTNLIKDALIEVKPTVMCAVPRFYEKI 286
Query: 159 YSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWA 218
+S + +++ + A R+V+ + + +A K + ++PS+
Sbjct: 287 FSTVHEKVSRAPAHRKVMFTWAVNMGAKMSACK---------QEAREPSW---------- 327
Query: 219 RIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYG 277
IL H +A+KLV K++ +G + + GG L I F+ A+GV V++GYG
Sbjct: 328 -----ILKQSHKIADKLVLSKLRMILGGNINFMPCGGAKLDATIGRFFHALGVNVKLGYG 382
Query: 278 LTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGY 337
+TE++ I+ S+G + E+KI G K + VRG VM+GY
Sbjct: 383 MTETTATISCWEDGKFHPDSIGTLMPGAEVKI-----------GKKNEILVRGPMVMKGY 431
Query: 338 FKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVE 397
+ P T EDG+L TGD G G L + R K+ + S G+ +
Sbjct: 432 YNKPEETALTFTEDGFLKTGDAGEF----------DADGNLYITDRIKELMKTSGGKYIA 481
Query: 398 PLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--- 454
P +E A + I QI VI ++ A+IVP + + AK L+I + D EL K
Sbjct: 482 PQVIEGAIGKDHFIEQIAVIADTRKFVSALIVPCYDALEEYAKELNIAYHDRMELVKNSE 541
Query: 455 -----EKTISLLYGELRKWTSKCSFQI 476
EK ++ L EL ++ F +
Sbjct: 542 IVEMLEKRVANLQKELARFEQVKKFTL 568
>gi|425063621|ref|ZP_18466746.1| Long-chain-fatty-acid--CoA ligase [Pasteurella multocida subsp.
gallicida X73]
gi|404382175|gb|EJZ78636.1| Long-chain-fatty-acid--CoA ligase [Pasteurella multocida subsp.
gallicida X73]
Length = 606
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 124/410 (30%), Positives = 197/410 (48%), Gaps = 50/410 (12%)
Query: 60 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRS---LYDIVPAENGDKFLSMLPPWHVYERA 116
D+ T +YTSGTTG PKGVML + NL HQ+++ + + D LS LP H++ERA
Sbjct: 179 DLFTLIYTSGTTGEPKGVMLDYANLAHQLKAHDEAFTTLNVSQYDSSLSFLPLSHIFERA 238
Query: 117 CGYFIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 175
++ RG Y N +++ L +P M +VP YE +Y+ + ++ + RR+
Sbjct: 239 WVAYVLHRGAVNCYLEDTNRVREALSEIRPTLMCAVPRFYEKIYTAVWDKVQKAPLFRRM 298
Query: 176 VARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKL 235
+ I + F+ I ++K+P I +L + LA+KL
Sbjct: 299 IFNWAIAV--GQKRFQFI--------SKKKP--------------IPFVLRQQYALADKL 334
Query: 236 VYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNV 294
V K++ +G + GG L +I LF+ +IG+ V++GYG+TE++ ++
Sbjct: 335 VLSKLRQLLGGRIRMMPCGGAKLEPNIGLFFHSIGINVKLGYGMTETTATVSCWEEGHFE 394
Query: 295 LGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWL 354
S+G + E+KI E NE+L VRG VM+GY+K P T + EDG+L
Sbjct: 395 PNSIGTLMPGAEVKI--GENNEIL---------VRGGMVMRGYYKKPQETADSFTEDGFL 443
Query: 355 NTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQI 414
TGD G P G L + R K+ + S G+ + P +E + I QI
Sbjct: 444 KTGDAGEFDPQ----------GNLYITDRIKELMKTSNGKYIAPQYIETKVGKDKFIEQI 493
Query: 415 VVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGE 464
VI ++ A+IVP + AK+L+I + D EL K I ++ +
Sbjct: 494 AVIADAKKYVSALIVPCFNSLEEYAKQLNIKYHDRLELIKHSDILQMFEQ 543
>gi|395006484|ref|ZP_10390302.1| AMP-forming long-chain acyl-CoA synthetase [Acidovorax sp. CF316]
gi|394315576|gb|EJE52370.1| AMP-forming long-chain acyl-CoA synthetase [Acidovorax sp. CF316]
Length = 617
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 126/438 (28%), Positives = 209/438 (47%), Gaps = 46/438 (10%)
Query: 57 GSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERA 116
G +D+A VYTSGTTG PKGVMLTH+N++ ++++ + + D FLS LP H +ER
Sbjct: 187 GPEDLAAIVYTSGTTGKPKGVMLTHRNVVSDVKAVLERIAPTVDDVFLSFLPLSHTFERT 246
Query: 117 CGYFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARR 174
GY++ + G + Y +V L +D+Q +P ++SVP +YE +++ + +++ +
Sbjct: 247 GGYYLPIAAGSCVAYARSVAQLAEDMQTIRPTVLVSVPRIYERIHAKLLEKLSPTP---- 302
Query: 175 VVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEK 234
++ A R ++ FC + P A W+ A+ W L +
Sbjct: 303 ------WKMQLYEAAQSRGWQRFCAAQGLPVPEADQA-GGWM-----NALPWG---LLQA 347
Query: 235 LVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCN 293
LV K + + G + VSGG L I + +G+ + GYG+TE++PV++ N
Sbjct: 348 LVAKPLLAQFGGRVRVAVSGGAPLSPTIAKCFLGLGLPLVQGYGMTETAPVVSVNSLLDN 407
Query: 294 VLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGW 353
VG + E++I G ++V G VM+GY+K P T + L DGW
Sbjct: 408 DPACVGRALPGVEVRI-----------GENRELQVHGPIVMKGYWKRPEDTARILAADGW 456
Query: 354 LNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQ 413
L TGD ++ G + + GR K+ IV STGE V P +LE A L L+ Q
Sbjct: 457 LGTGD-----------QADIVDGRIYIRGRIKEIIVTSTGEKVPPGDLELALLADPLLEQ 505
Query: 414 IVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSKCS 473
V+G+++ A+ V +E A L + D L+ + + K T+ +
Sbjct: 506 AFVVGENRPFIAAVAVLRADEWQRLAGDLGLAAQDPDSLNHPAVHRAVLARIEKSTASFA 565
Query: 474 FQIGP--IHVVDEPFTVN 489
P +H+ P+++
Sbjct: 566 RYAVPRAVHLTLAPWSIE 583
>gi|357462835|ref|XP_003601699.1| 4-coumarate-CoA ligase [Medicago truncatula]
gi|355490747|gb|AES71950.1| 4-coumarate-CoA ligase [Medicago truncatula]
Length = 346
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 75/99 (75%), Positives = 89/99 (89%)
Query: 294 VLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGW 353
V+GSVGHP+ HTE K+VD+ET EVLP G KGI+KVRG Q+M+GY+KNPSAT QA+D+DGW
Sbjct: 39 VIGSVGHPLKHTEFKVVDSETGEVLPPGYKGILKVRGPQLMKGYYKNPSATNQAIDKDGW 98
Query: 354 LNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLST 392
LNTGDIGWIA +HS GRSR CGGV+V+EGRAKDTIVLS+
Sbjct: 99 LNTGDIGWIAAYHSSGRSRNCGGVIVVEGRAKDTIVLSS 137
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 63/102 (61%), Positives = 86/102 (84%), Gaps = 1/102 (0%)
Query: 388 IVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHA 447
+ + GENVEP+ELEEAA+RSSLI+QIVVIGQD+RR GA++VP+KE VL AA+ LSI+ +
Sbjct: 218 VSIREGENVEPVELEEAAMRSSLIQQIVVIGQDKRRLGAVVVPNKE-VLKAARELSIIDS 276
Query: 448 DASELSKEKTISLLYGELRKWTSKCSFQIGPIHVVDEPFTVN 489
++S+LS+E SL+Y ELR WTS+ FQIGPI +V++PFT++
Sbjct: 277 NSSDLSQENVTSLIYNELRTWTSEFPFQIGPILLVNDPFTID 318
>gi|451965692|ref|ZP_21918949.1| putative long-chain fatty-acid--CoA ligase [Edwardsiella tarda NBRC
105688]
gi|451315494|dbj|GAC64311.1| putative long-chain fatty-acid--CoA ligase [Edwardsiella tarda NBRC
105688]
Length = 600
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 121/411 (29%), Positives = 199/411 (48%), Gaps = 50/411 (12%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDI-VPAENGDKFLSMLPPWHVYERAC 117
DD+ T +YTSGTTG PKGVML ++NL Q+ L+D + + D L LP HV+ERA
Sbjct: 180 DDLFTLIYTSGTTGEPKGVMLDYRNLAAQL-YLHDARLNVSDQDVSLCFLPLSHVFERAW 238
Query: 118 GYFIFSRGIELMYTAVRNL-KDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 176
+++ G + +Y NL ++ +Q +P M +VP YE ++S +Q ++ + RR +
Sbjct: 239 SFYVMHSGAQNVYLHDTNLVREAMQAVRPTMMCAVPRFYEKIFSAVQAKVAQAPWLRRQL 298
Query: 177 ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLV 236
R + F R G R + ++ +H A++LV
Sbjct: 299 FRWAVWC--GEQRFLRERAG----------------------RPLSGMMAAMHRAADRLV 334
Query: 237 YKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVL 295
K++ +G + + G L + LF++A+G+ ++ GYG+TE+ ++
Sbjct: 335 LGKLRDILGGRVRFLPAAGAKLDDQVILFFQALGLNIKYGYGMTETCATVSCWEEHDFRF 394
Query: 296 GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLN 355
GS+G P+ E++I AE NE+ +VRG VM+GYF P T Q+ DGWL
Sbjct: 395 GSIGRPLPGIEVRI--AEENEI---------QVRGPIVMRGYFNKPQETAQSFTADGWLK 443
Query: 356 TGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIV 415
TGD G + G L + R KD + S G+ + P +E R I Q+
Sbjct: 444 TGDAGALDAQ----------GNLFITERLKDLMKTSNGKYIAPQLVEGTLARDRFIEQVA 493
Query: 416 VIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELR 466
VI ++ A+IVP + + A+ +++ + D +L + I ++ ELR
Sbjct: 494 VIADARKFVSALIVPCFDALEEYARSINLKYHDRLDLLRHSHIVEMF-ELR 543
>gi|239622452|ref|ZP_04665483.1| conserved hypothetical protein [Bifidobacterium longum subsp.
infantis CCUG 52486]
gi|239514449|gb|EEQ54316.1| conserved hypothetical protein [Bifidobacterium longum subsp.
infantis CCUG 52486]
Length = 607
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 129/465 (27%), Positives = 217/465 (46%), Gaps = 69/465 (14%)
Query: 45 NDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNL----LHQIRSLYDIVPAENG 100
+D + + T+ +DD+AT VYTSG+TGNPKG LTHKN + ++L+++V ++
Sbjct: 168 SDEELNERVATVRADDLATIVYTSGSTGNPKGAELTHKNFVSITISASQALHEVV-LDDH 226
Query: 101 DKFLSMLPPWHVYERACGYFIFSR--GIELMYTAVRNLKDDLQRYQPHYMISVPLVYETL 158
+ L LP H + R Y + G+ + L DL+ ++P Y++ VP V+E +
Sbjct: 227 PRLLLFLPLAHCFARFIQYASIASDDGVVGYLPDTKTLLPDLRSFEPTYLLGVPRVFEKV 286
Query: 159 YSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWA 218
Y+ + R V A + ++ ++ E ++ Y
Sbjct: 287 YNAASHKAGAGWKGRLFVKAA--EAARVWSRKEQAGEQHTFAEIAERAKY---------- 334
Query: 219 RIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDL--FYEAIGVKVQVGY 276
E LVY+ ++ A+G V+ GG+ P+ +DL FY IG+ + GY
Sbjct: 335 --------------ETLVYRTVRGALGPKIKYVACGGA-PLSLDLAHFYNGIGLPMIQGY 379
Query: 277 GLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQG 336
G+TE++ AA R T NV+G+VG P + I+I D +G ++V+G V +G
Sbjct: 380 GMTETAAPFAATRVTDNVIGTVGQPAPGSSIRISD-----------EGELQVKGPNVFRG 428
Query: 337 YFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENV 396
Y P T +A DGWL TGD+ I G +++ GR KD I+ + G+NV
Sbjct: 429 YHNLPEKTAEAFTADGWLRTGDLAEIDD----------AGRIIITGRIKDIIITAGGKNV 478
Query: 397 EPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVL--MAAKRLSIVHADASELSK 454
P+ LEE + ++ VV+G + GA++ D E + + A LS + + +
Sbjct: 479 SPIPLEEEIAKCPIVEHCVVVGDQRPFIGALVTLDPESLALWLPAHGLST----ETPVDR 534
Query: 455 EKTISLLYGELRKWTSKCSFQIG------PIHVVDEPFTVNFLCL 493
T + + E++++ K + + V+D FT CL
Sbjct: 535 LATNAAVREEIQQYVDKANATVSRAESVRKFAVLDTQFTQENKCL 579
>gi|317493293|ref|ZP_07951715.1| AMP-binding enzyme [Enterobacteriaceae bacterium 9_2_54FAA]
gi|316918686|gb|EFV40023.1| AMP-binding enzyme [Enterobacteriaceae bacterium 9_2_54FAA]
Length = 600
Score = 168 bits (426), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 121/443 (27%), Positives = 210/443 (47%), Gaps = 52/443 (11%)
Query: 52 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWH 111
+ E D+ T +YTSGTTG PKGVML + N+ Q+R + + D L LP H
Sbjct: 173 RIEQADMSDLFTLIYTSGTTGEPKGVMLNYTNMGAQLRLHDERLTVTAEDVSLCFLPLSH 232
Query: 112 VYERACGYFIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSS 170
V+ERA +++ G + +Y + N +++ +Q +P M +VP YE ++S I +++ +
Sbjct: 233 VFERAWSFYVMHSGAQNVYLSDTNQVREAMQSVKPTVMCAVPRFYEKIFSAIHEKVAQAK 292
Query: 171 AARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHL 230
+R + + I + KR F R +P+ +L +H
Sbjct: 293 WHKRAMFKCAI-----WVGEKR----FLTERAGCKPN---------------VVLSAMHK 328
Query: 231 LAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARR 289
LA+KLV K++ +G + + G L ++ LF++A+G ++ GYG+TE+ ++
Sbjct: 329 LADKLVLSKLRGILGGRVRFLPAAGAKLDDNVILFFQALGANIKYGYGMTETCATVSCWE 388
Query: 290 PTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALD 349
GS+G P+ E++I G + ++VRG VM GY+ P T
Sbjct: 389 ENDFRFGSIGKPLPDVEVRI-----------GHENEIQVRGPIVMCGYYNKPLETAATFT 437
Query: 350 EDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSS 409
EDGWL TGD G + + G L + R KD + S G+ + P +E +
Sbjct: 438 EDGWLKTGDAGALDEN----------GNLFITERLKDLMKTSNGKYIAPQMVEGTLAQDR 487
Query: 410 LIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYG----EL 465
I Q+ VI ++ A+IVP E + AK +++ + D +L + I ++ E+
Sbjct: 488 FIEQVAVIADARKFVSALIVPCFESLEEYAKSINLKYHDRLDLLRHSHIVEMFDQRLREM 547
Query: 466 RKWTSKCSFQIGPIHVVDEPFTV 488
+K +K Q+ ++ E F++
Sbjct: 548 QKGLAKFE-QVKRFTLLPEAFSM 569
>gi|229820393|ref|YP_002881919.1| AMP-dependent synthetase and ligase [Beutenbergia cavernae DSM
12333]
gi|229566306|gb|ACQ80157.1| AMP-dependent synthetase and ligase [Beutenbergia cavernae DSM
12333]
Length = 606
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 131/426 (30%), Positives = 207/426 (48%), Gaps = 63/426 (14%)
Query: 15 APDIVEEIPVFSYDE--IIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTG 72
APD+ V++ D+ + DL R+ +D +DA +++ +G +D+AT +YTSGTTG
Sbjct: 139 APDVRT---VWTIDDGALEDLTRDG----ADVDDAEIAARHDAVGMEDLATIIYTSGTTG 191
Query: 73 NPKGVMLTHKNLLHQIRSLYDIVP---AENGDKFLSMLPPWHVYERACGYFIFSRGIELM 129
P+G LTH N + ++ ++P A G + L +P HV+ R + + G+ L
Sbjct: 192 RPRGAELTHGNFVALTKNAIAVIPDVFAAPGARTLLFMPLAHVFARFVEVLVVAAGVPLG 251
Query: 130 YTA-VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYT 188
+T L DL ++P +++SVP V+E +Y+ + + FA+
Sbjct: 252 HTPDTTTLVADLGTFRPTFILSVPRVFEKVYNSAEAKAAAGGKE----------KIFAWA 301
Query: 189 AFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS- 247
A R + + + PSY + L H +A KLV K+Q A+G
Sbjct: 302 A--RTAIAYSRSLDTGGPSYGLRL---------------KHRIAHKLVLHKLQDAMGGKL 344
Query: 248 KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEI 307
+ VSGGG L + F+ IG+ V GYGLTE++ + RP +G+VG P+ I
Sbjct: 345 EHAVSGGGPLGERLGHFFRGIGLVVLEGYGLTETTAPLNVNRPERVKIGTVGPPLPGIGI 404
Query: 308 KIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHS 367
+I A E+L +G V +GY N +AT +A+ +DGW +TGDIG +
Sbjct: 405 RI--APDGEIL---------AQGIAVFRGYHDNDAATAEAM-KDGWFHTGDIGEL----- 447
Query: 368 RGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAI 427
G L + GR K+ IV + G+NV P LE+A L+ Q +V+G + A+
Sbjct: 448 -----DSDGYLRITGRKKEIIVTAGGKNVAPAPLEDAIRAHPLVSQCLVVGDGRPFVAAL 502
Query: 428 IVPDKE 433
I D E
Sbjct: 503 ITLDPE 508
>gi|326333548|ref|ZP_08199788.1| putative long-chain-fatty-acid--CoA ligase [Nocardioidaceae
bacterium Broad-1]
gi|325948657|gb|EGD40757.1| putative long-chain-fatty-acid--CoA ligase [Nocardioidaceae
bacterium Broad-1]
Length = 597
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 122/400 (30%), Positives = 189/400 (47%), Gaps = 53/400 (13%)
Query: 39 KAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAE 98
K +D D + + + +D AT +YTSGTTG PKG +LTH N + ++ D +
Sbjct: 159 KLGTDITDEQLEARRSAVTPEDAATLIYTSGTTGRPKGCVLTHGNFMFELGVAVDSLDGL 218
Query: 99 ---NGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLV 154
G L LP HV+ R L +T ++NL DL +QP ++++VP V
Sbjct: 219 FNIEGRSTLLFLPLAHVFARIIQIGCIKSRTRLGHTPDIKNLVADLGTFQPTFVLAVPRV 278
Query: 155 YETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALID 214
+E +Y+ +A+++ VA RI T Y T K P L A
Sbjct: 279 FEKVYN---------TASQKAVADGKGRIFDMATEVAIDYS--RATETGKAPLLLTAK-- 325
Query: 215 WLWARIICAILWPLHLLAEKLVYKKIQSAIGISKA-GVSGGGSLPMHIDLFYEAIGVKVQ 273
H L KLVY K+ +A+G + + +SGG L + FY IGV V
Sbjct: 326 --------------HKLFSKLVYGKLLAALGGNCSYAISGGAPLGDRLGHFYRGIGVTVL 371
Query: 274 VGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQV 333
GYGLTE++ + P +G+VG P+ T +++ D G + +G QV
Sbjct: 372 EGYGLTETTAALTVNLPEAFKIGTVGRPLPGTSVRVAD-----------DGELLFKGGQV 420
Query: 334 MQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTG 393
++ Y++NP+AT +A +DGW ++GD+G + G + + GR K+ +V + G
Sbjct: 421 LKEYWQNPTATAEAKTDDGWFHSGDLGEVDDE----------GFVKITGRKKEILVTAGG 470
Query: 394 ENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 433
+NV P LE+ L+ Q +V+G Q GAI+ D E
Sbjct: 471 KNVAPAVLEDRLRAHVLVDQCIVVGDGQPFIGAIVTIDPE 510
>gi|407278950|ref|ZP_11107420.1| long-chain fatty-acid--CoA ligase [Rhodococcus sp. P14]
Length = 596
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 119/394 (30%), Positives = 182/394 (46%), Gaps = 52/394 (13%)
Query: 45 NDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAE---NGD 101
+DA + + I +DD+A+ VYTSGTTG PKG MLTH+N ++R + E G
Sbjct: 161 DDATLQARLDGIRADDLASLVYTSGTTGRPKGCMLTHRNFYSEVRGILTASIGEVAKPGS 220
Query: 102 KFLSMLPPWHVYERACGYFIFSRG-IELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYS 160
+ L+ LP HV RA +F G + ++ + +RY P+ ++ VP V+E +
Sbjct: 221 RVLTFLPLAHVLARAVSLAVFEGGAAQAHWSDFGTISAQFERYAPNTILGVPRVFEKVRD 280
Query: 161 GIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARI 220
++ + FA+ I L R PS+
Sbjct: 281 AAARKAAAGGRFNAAI--------FAFAEETAIAYSESLDRG--GPSF------------ 318
Query: 221 ICAILWPLHLLAEKLVYKKIQSAIGISK-AGVSGGGSLPMHIDLFYEAIGVKVQVGYGLT 279
L +A+KLVY K++ A+G +SGGG+L + F+ +GV + GYGLT
Sbjct: 319 ---ALKAKRNMADKLVYAKLRQAMGGECWFAISGGGALSPRLGHFFRGVGVPIYEGYGLT 375
Query: 280 ESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFK 339
ES+ + P +G+VG P+ +I D G +++RG V QGY++
Sbjct: 376 ESTAAHSVNVPGAQKIGTVGQPMGGNSTRIAD-----------DGEIELRGGVVFQGYWR 424
Query: 340 NPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPL 399
N AT +A DGW TGD+G I G + + GR KD I+ + G+NV P
Sbjct: 425 NEKATAEAF-HDGWFRTGDLGEIDED----------GYVSITGRKKDLIITAGGKNVSPG 473
Query: 400 ELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 433
LE+ +L+ Q VVIG + A++ D E
Sbjct: 474 PLEDRMRSHTLVSQAVVIGDGRSYITALLTVDPE 507
>gi|440229441|ref|YP_007343234.1| AMP-forming long-chain acyl-CoA synthetase [Serratia marcescens
FGI94]
gi|440051146|gb|AGB81049.1| AMP-forming long-chain acyl-CoA synthetase [Serratia marcescens
FGI94]
Length = 599
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 125/412 (30%), Positives = 195/412 (47%), Gaps = 50/412 (12%)
Query: 60 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGY 119
D+ T +YTSGTTG PKGVML ++N+ Q+ D + D LS LP HV+ERA +
Sbjct: 182 DLFTLIYTSGTTGEPKGVMLDYRNMAAQLCQHDDRLTVGEEDVSLSFLPLSHVFERAWSF 241
Query: 120 FIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 178
FI G + ++ + +++ + +P M +VP YE ++S + +++ + RR++ R
Sbjct: 242 FIMHSGAQNVFLPNTDWVREAMTAVRPTVMCAVPRFYEKIFSAVHEKVARAPWWRRLLFR 301
Query: 179 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPL-HLLAEKLVY 237
I C R Q A C L L H A+KLV
Sbjct: 302 WAIG---------------CGERKFLQER----------AGTPCGRLSALTHRWADKLVL 336
Query: 238 KKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLG 296
K++ +G + + G L ++ LF++A+GV ++ GYG+TE+ ++ G
Sbjct: 337 SKLRGLLGGRVRFLPAAGAKLDDNVILFFQALGVNIKYGYGMTETCATVSCWEEHDFRFG 396
Query: 297 SVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNT 356
S+G P+ E++I AE NE ++VRG VM+GYF P T Q DGWL T
Sbjct: 397 SIGKPLPDVEVRI--AEENE---------IQVRGPVVMRGYFNKPLETAQTFTADGWLKT 445
Query: 357 GDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVV 416
GD G + G L + R KD + S G+ + P LE + I Q+ V
Sbjct: 446 GDAGAVDEQ----------GNLFITERLKDLMKTSGGKYIAPQMLEGTLAQDRFIEQVAV 495
Query: 417 IGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE-KTISLLYGELRK 467
I ++ A+IVP E + AK L++ + D EL + + I + LR+
Sbjct: 496 IADARKFVSALIVPCFESLEEYAKSLNLKYHDRLELLRHSQIIEMFEARLRE 547
>gi|339478658|gb|ABE95112.1| Long-chain-fatty-acid--CoA ligase [Bifidobacterium breve UCC2003]
Length = 607
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 129/455 (28%), Positives = 217/455 (47%), Gaps = 69/455 (15%)
Query: 55 TIGSDDIATYVYTSGTTGNPKGVMLTHKNLLH----QIRSLYDIVPAENGDKFLSMLPPW 110
T+ ++D+AT VYTSG+TGNPKG LTHKN + ++L+++V ++ + L LP
Sbjct: 178 TVRTNDLATIVYTSGSTGNPKGAELTHKNFVSITIAASQALHEVV-LDDHPRLLLFLPLA 236
Query: 111 HVYERACGYFIFSR--GIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFT 168
H + R Y + G+ T ++L DL+ ++P Y++ VP V+E +Y+ + T
Sbjct: 237 HCFARFIQYASIASDDGVVGYLTDTKSLLPDLRSFEPTYLLGVPRVFEKVYNAASHKAGT 296
Query: 169 SSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPL 228
R + A + ++ ++ E ++ Y
Sbjct: 297 GWKGRLFLKAA--EAARVWSRKEQSGEQHTFAEIAERAKY-------------------- 334
Query: 229 HLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDL--FYEAIGVKVQVGYGLTESSPVIA 286
E LVY+ ++ A+G V+ GG+ P+ +DL FY IG+ + GYG+TE++ A
Sbjct: 335 ----ETLVYRTVRGALGPKIKYVACGGA-PLSLDLAHFYNGIGLPMIQGYGMTETAAPFA 389
Query: 287 ARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQ 346
A R T NV+G+VG P + I+I D +G ++V+G V +GY P T +
Sbjct: 390 ATRVTDNVIGTVGQPAPGSSIRISD-----------EGELQVKGPNVFRGYHNLPEKTAE 438
Query: 347 ALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAAL 406
A DGWL TGD+ I GR +++ GR KD I+ + G+NV P+ LEE
Sbjct: 439 AFTADGWLRTGDLAEI---DDEGR-------IIITGRIKDIIITAGGKNVSPIPLEEEIA 488
Query: 407 RSSLIRQIVVIGQDQRRPGAIIVPDKEE--VLMAAKRLSIVHADASELSKEKTISLLYGE 464
+ ++ VV+G + GA++ D E + + A LS + + + T + + E
Sbjct: 489 KCPIVEHCVVVGDQRPFIGALVTLDPESLAIWLPAHGLST----ETPVDRLATNAAVREE 544
Query: 465 LRKWTSKCSFQIG------PIHVVDEPFTVNFLCL 493
++++ K + + V+D FT CL
Sbjct: 545 IQQYVDKANATVSRAESVRKFAVLDTQFTQENKCL 579
>gi|293189663|ref|ZP_06608380.1| putative CoA ligase [Actinomyces odontolyticus F0309]
gi|292821401|gb|EFF80343.1| putative CoA ligase [Actinomyces odontolyticus F0309]
Length = 627
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 122/391 (31%), Positives = 185/391 (47%), Gaps = 53/391 (13%)
Query: 48 RKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVP---AENGDKFL 104
R + + + DDIAT VYTSGTTG PKG +L+H+N + + + +P A + L
Sbjct: 193 RVAARADALTKDDIATIVYTSGTTGTPKGTVLSHENFTNLCLNAHAWMPEIAAGKDSRLL 252
Query: 105 SMLPPWHVYERACGYF-IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQ 163
LP HV+ R F I G+ + ++NL +DL ++P Y++ VP V E +Y+
Sbjct: 253 LFLPLAHVFARFLQVFQISGNGVLGHASNIKNLLNDLASFKPSYLLVVPRVLEKIYNSAD 312
Query: 164 KQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICA 223
+ +S +R + R +++ AY+ EG PS A
Sbjct: 313 TK---ASGPKRKIFRWAAKVAIAYSRALDTEEG---------PS---------------A 345
Query: 224 ILWPLHLLAEKLVYKKIQSAI-GISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESS 282
L H LA++LVY++I + G + VSGG L + FY +G+ V GYGLTE+
Sbjct: 346 SLKAQHALADRLVYQQIIRLVGGNADYIVSGGAPLATWLAHFYRGVGIPVLEGYGLTETV 405
Query: 283 PVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPS 342
++ P + +G+VG + KI D +G + ++G V Q Y +P
Sbjct: 406 GPVSVNTPRLSKIGTVGPALPPMSFKISD-----------EGEILLKGPSVFQRYHNDPG 454
Query: 343 ATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELE 402
AT EDGW TGD+G S G + + GRAK+ IV + G+NV P LE
Sbjct: 455 ATAACFTEDGWFRTGDLG----------SLDRDGYVSITGRAKEIIVTAGGKNVAPAALE 504
Query: 403 EAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 433
LI Q++V+G + A+I D E
Sbjct: 505 NPMRSHPLISQVLVVGDQRPFVAALITLDAE 535
>gi|442320394|ref|YP_007360415.1| putative long-chain-fatty-acid--CoA ligase [Myxococcus stipitatus
DSM 14675]
gi|441488036|gb|AGC44731.1| putative long-chain-fatty-acid--CoA ligase [Myxococcus stipitatus
DSM 14675]
Length = 620
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 128/410 (31%), Positives = 196/410 (47%), Gaps = 60/410 (14%)
Query: 26 SYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLL 85
S +++ GRE+ +A N A + ++ SDD VYTSGTTG PKG +LTH N
Sbjct: 166 SLADVVAKGREAHQA----NPAAFDERVASVKSDDTYCIVYTSGTTGAPKGTLLTHGNWT 221
Query: 86 HQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYT-AVRNLKDDLQRYQ 144
+Q +++ I E D + LP HV+ + S G L+ +V L ++ +
Sbjct: 222 YQAQAVRAIGMMEPSDSVMLFLPLAHVFAQVAKVAWLSMGCRLIIAESVDKLMANIAETR 281
Query: 145 PHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQK 204
P + SVP V+E +Y+ + + AA + R L R +F +++ + + Q
Sbjct: 282 PTVLPSVPRVFEKVYNTV---VSNGMAAPGLKGR-LTRWAFG------LFDEYVEAKQQG 331
Query: 205 QPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAG-----VSGGGSLPM 259
+ + LA+KLV+ K+++ + G VSGG L
Sbjct: 332 REYNSLGFT-----------------LAKKLVFTKVRATLDEKLGGNMRLFVSGGAPLSR 374
Query: 260 HIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLP 319
I F++ +G KV GYGLTE+S A RP +GSVG P+ TE+KI
Sbjct: 375 KIAYFFDLLGFKVVEGYGLTETSAPCNANRPNKIKIGSVGPPMPGTEVKI---------- 424
Query: 320 AGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLV 379
+ G V VRG V +GY+KNP+AT +ALD DGW +TGDIG + + L
Sbjct: 425 -AADGEVLVRGPCVTKGYYKNPTATAEALDADGWYHTGDIGEVDSDN----------YLR 473
Query: 380 LEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIV 429
+ R KD IV + G+NV P +E ++ Q +V G +RP +++
Sbjct: 474 ITDRKKDIIVTAGGKNVAPQNIENTLKTFPILSQAMVYG--DKRPYLVVL 521
>gi|338534144|ref|YP_004667478.1| putative long-chain-fatty-acid--CoA ligase [Myxococcus fulvus HW-1]
gi|337260240|gb|AEI66400.1| putative long-chain-fatty-acid--CoA ligase [Myxococcus fulvus HW-1]
Length = 614
Score = 168 bits (425), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 125/411 (30%), Positives = 195/411 (47%), Gaps = 60/411 (14%)
Query: 25 FSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNL 84
S +++ GR A D +AR + +D A +YTSGTTG+PKGV+LTH+N
Sbjct: 159 LSLADVVTQGRAEHAARPDDFEAR----VNGVSMEDTAAIIYTSGTTGDPKGVILTHQNW 214
Query: 85 LHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYT-AVRNLKDDLQRY 143
++ ++ + GD + LP HV+ + S G L+ +V L +L
Sbjct: 215 AYEAKAAQSVGMMVPGDSVMLFLPLAHVFAQVVKAAWLSMGYRLVVAESVDKLLANLAET 274
Query: 144 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQ 203
+P + SVP V+E +Y+ + T+ +A + L R +F ++++ + R Q
Sbjct: 275 RPTALPSVPRVFEKVYN----NVVTNGSATPGLKGRLFRWAF------KLFDEYVEARQQ 324
Query: 204 KQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAI-----GISKAGVSGGGSLP 258
+ + LA+KLV+ K+ + I G + +SGG L
Sbjct: 325 GREYSSLGFT-----------------LAKKLVFSKVHATISEKLGGNMRVFISGGAPLS 367
Query: 259 MHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVL 318
I F++ +G+KV GYGLTE+S R +GSVG P+ TE+KI
Sbjct: 368 PKIGYFFDLLGLKVLEGYGLTETSAGTTINREHRIKIGSVGAPLPGTEVKI--------- 418
Query: 319 PAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVL 378
S G + +RG VM+GY+KNP AT A+D +GW +TGDIG + + L
Sbjct: 419 --ASDGEILIRGPGVMKGYYKNPEATADAIDAEGWFHTGDIGALDADN----------YL 466
Query: 379 VLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIV 429
+ R KD IV + G+NV P LE A +I Q +V G +RP +++
Sbjct: 467 RITDRKKDLIVTAGGKNVAPQNLENALKTFPIISQAMVYG--DKRPYLVVL 515
>gi|336320550|ref|YP_004600518.1| AMP-dependent synthetase/ligase [[Cellvibrio] gilvus ATCC 13127]
gi|336104131|gb|AEI11950.1| AMP-dependent synthetase and ligase [[Cellvibrio] gilvus ATCC
13127]
Length = 605
Score = 168 bits (425), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 118/381 (30%), Positives = 191/381 (50%), Gaps = 55/381 (14%)
Query: 61 IATYVYTSGTTGNPKGVMLTHKNL----LHQIRSLYDIVPAENGDKFLSMLPPWHVYERA 116
+AT +YTSGTTG PKGV LTH N ++ + L ++V +E G + L +P HV+ R
Sbjct: 182 VATVIYTSGTTGRPKGVELTHGNFYELTVNAVEGLREVV-SEPGSRTLLFMPLAHVFARF 240
Query: 117 CGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 175
G L ++ R L DDL ++P ++++VP V+E +Y+G +++ ++ +
Sbjct: 241 IHVLCMPAGAVLGHSPDTRTLLDDLASFRPTFILAVPRVFEKVYNGAEQK--AAAGGKGS 298
Query: 176 VARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKL 235
+ + + S Y+ G PS W R+ H +A+ L
Sbjct: 299 IFQRAAKTSIVYSRALDTPRG---------PSP--------WLRL-------QHKVADVL 334
Query: 236 VYKKIQSAI-GISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNV 294
V ++++ + G +K +SGG L + FY +G+KV GYGLTE++ RP
Sbjct: 335 VLHRLRALLGGQAKWAISGGAPLGERLGHFYRGVGLKVLEGYGLTETTAPATVNRPARTK 394
Query: 295 LGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWL 354
+G+VG P+ T ++I D G ++++G QV QGY N +AT++++ DGW
Sbjct: 395 IGTVGKPLPGTAVRIAD-----------DGEIEIKGIQVFQGYHNNDAATQESM-HDGWF 442
Query: 355 NTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQI 414
TGD+G + G L + GR K+ IV + G+NV P LE+ LI Q+
Sbjct: 443 RTGDLGSLDDE----------GYLRITGRKKEIIVTAGGKNVAPAVLEDRLRGHPLISQV 492
Query: 415 VVIGQDQRRPGAIIVPDKEEV 435
VV+G + GA++ D E V
Sbjct: 493 VVVGDQRPFIGALVTLDPEGV 513
>gi|343494337|ref|ZP_08732599.1| putative long-chain-fatty-acid-CoA ligase [Vibrio nigripulchritudo
ATCC 27043]
gi|342825242|gb|EGU59741.1| putative long-chain-fatty-acid-CoA ligase [Vibrio nigripulchritudo
ATCC 27043]
Length = 602
Score = 168 bits (425), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 129/437 (29%), Positives = 204/437 (46%), Gaps = 55/437 (12%)
Query: 52 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWH 111
+ E + DD+ T +YTSGTTG PKGVMLT+ N+ Q+ + N D L LP H
Sbjct: 171 RLEEVELDDLLTLIYTSGTTGQPKGVMLTYANIASQLEGHDRRLGLTNQDVSLCFLPLSH 230
Query: 112 VYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSS 170
V+ERA +++ +G Y +++ L +P M +VP YE ++S I +++ +
Sbjct: 231 VFERAWTFYVLYKGATNCYLKDTMQVREALGDIRPTVMCAVPRFYEKIFSAIHEKVSKAP 290
Query: 171 AARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHL 230
R+++ ++A ++ E R +PS++ L H
Sbjct: 291 FIRKIL------FTWAVNMGAKMAE---CKRTNSRPSFM---------------LQRCHK 326
Query: 231 LAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARR 289
LA+KLV K+++ +G + GG L I F+ AIG+ V++GYG+TE++ I+
Sbjct: 327 LADKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTATISCWD 386
Query: 290 PTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALD 349
S+G + ++KI E NE+L VRG VM+GY+K P T + D
Sbjct: 387 DGTFNPDSIGTSMPGAQVKI--GENNEIL---------VRGPMVMKGYYKLPEETAKTFD 435
Query: 350 EDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSS 409
E G+L TGD G G L + R K+ + S G+ + P +E A +
Sbjct: 436 EHGFLKTGDAGKFDDQ----------GNLFITDRIKELMKTSGGKYIAPQMIEGAIGKDH 485
Query: 410 LIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLL 461
I QI VI ++ A+IVP + + AK L+I + D +L K E + L
Sbjct: 486 FIEQIAVIADTRKFVSALIVPCFDALEEHAKELNIKYHDRMDLIKHSQVVEMFESRLEGL 545
Query: 462 YGELRKWTSKCSFQIGP 478
EL K+ F + P
Sbjct: 546 QKELAKFEQVKKFTLLP 562
>gi|290769763|gb|ADD61538.1| putative protein [uncultured organism]
Length = 607
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 129/465 (27%), Positives = 217/465 (46%), Gaps = 69/465 (14%)
Query: 45 NDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLH----QIRSLYDIVPAENG 100
+D + + T+ +DD+AT VYTSG+TGNPKG LTHKN + ++L+++V ++
Sbjct: 168 SDEELNERVATVRADDLATIVYTSGSTGNPKGAELTHKNFVSITITASQALHEVV-LDDH 226
Query: 101 DKFLSMLPPWHVYERACGYFIFSR--GIELMYTAVRNLKDDLQRYQPHYMISVPLVYETL 158
+ L LP H + R Y + G+ + L DL+ ++P Y++ VP V+E +
Sbjct: 227 PRLLLFLPLAHCFARFIQYASIASDDGVVGYLPDTKTLLPDLRSFEPTYLLGVPRVFEKV 286
Query: 159 YSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWA 218
Y+ + R V A + ++ ++ E ++ Y
Sbjct: 287 YNAASHKAGAGWKGRLFVKAA--EAARIWSRKEQAGEQHTFAEIAERAKY---------- 334
Query: 219 RIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDL--FYEAIGVKVQVGY 276
E LVY+ ++ A+G V+ GG+ P+ +DL FY IG+ + GY
Sbjct: 335 --------------ETLVYRTVRGALGPKIKYVACGGA-PLSLDLAHFYNGIGLPMIQGY 379
Query: 277 GLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQG 336
G+TE++ AA R T NV+G+VG P + I+I D +G ++V+G V +G
Sbjct: 380 GMTETAAPFAATRVTDNVIGTVGQPAPGSSIRISD-----------EGELQVKGPNVFRG 428
Query: 337 YFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENV 396
Y P T +A DGWL TGD+ I G +++ GR KD I+ + G+NV
Sbjct: 429 YHNLPEKTAEAFTADGWLRTGDLAEIDD----------AGRIIITGRIKDIIITAGGKNV 478
Query: 397 EPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEE--VLMAAKRLSIVHADASELSK 454
P+ LEE + ++ VV+G + GA++ D E + + A LS + + +
Sbjct: 479 SPIPLEEEIAKCPIVEHCVVVGDQRPFIGALVTLDPESLAIWLPAHGLST----ETPVDR 534
Query: 455 EKTISLLYGELRKWTSKCSFQIG------PIHVVDEPFTVNFLCL 493
T + + E++++ K + + V+D FT CL
Sbjct: 535 LATNAAVREEIQQYVDKANATVSRAESVRKFAVLDTQFTQENKCL 579
>gi|154509322|ref|ZP_02044964.1| hypothetical protein ACTODO_01847 [Actinomyces odontolyticus ATCC
17982]
gi|153798956|gb|EDN81376.1| AMP-binding enzyme [Actinomyces odontolyticus ATCC 17982]
Length = 627
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 122/391 (31%), Positives = 185/391 (47%), Gaps = 53/391 (13%)
Query: 48 RKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVP---AENGDKFL 104
R + + + DDIAT VYTSGTTG PKG +L+H+N + + + +P A + L
Sbjct: 193 RVAARADALTKDDIATIVYTSGTTGTPKGTVLSHENFTNLCLNAHAWMPEIAAGKDSRLL 252
Query: 105 SMLPPWHVYERACGYF-IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQ 163
LP HV+ R F I G+ + ++NL +DL ++P Y++ VP V E +Y+
Sbjct: 253 LFLPLAHVFARFLQVFQISGNGVLGHASNIKNLLNDLASFKPSYLLVVPRVLEKIYNSAD 312
Query: 164 KQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICA 223
+ +S +R + R +++ AY+ EG PS A
Sbjct: 313 TK---ASGPKRKIFRWAAKVAIAYSRALDTDEG---------PS---------------A 345
Query: 224 ILWPLHLLAEKLVYKKIQSAI-GISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESS 282
L H LA++LVY++I + G + VSGG L + FY +G+ V GYGLTE+
Sbjct: 346 SLKAQHALADRLVYQQIIRLVGGNADYIVSGGAPLATWLAHFYRGVGIPVLEGYGLTETV 405
Query: 283 PVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPS 342
++ P + +G+VG + KI D +G + ++G V Q Y +P
Sbjct: 406 GPVSVNTPRLSKIGTVGPALPPMSFKISD-----------QGEILLKGPSVFQRYHNDPG 454
Query: 343 ATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELE 402
AT EDGW TGD+G S G + + GRAK+ IV + G+NV P LE
Sbjct: 455 ATAACFTEDGWFRTGDLG----------SLDRDGYVSITGRAKEIIVTAGGKNVAPAALE 504
Query: 403 EAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 433
LI Q++V+G + A+I D E
Sbjct: 505 NPMRSHPLISQVLVVGDQRPFVAALITLDAE 535
>gi|350530149|ref|ZP_08909090.1| hypothetical protein VrotD_03450 [Vibrio rotiferianus DAT722]
Length = 602
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 125/429 (29%), Positives = 204/429 (47%), Gaps = 55/429 (12%)
Query: 60 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGY 119
D+ T +YTSGTTG PKGVML + N+ Q+ + + D L LP HV+ERA +
Sbjct: 179 DLLTLIYTSGTTGQPKGVMLDYANISAQLEGHDERLSLTEDDVSLCFLPLSHVFERAWTF 238
Query: 120 FIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 178
++ +G Y ++D L +P M +VP YE ++S I +++ + R+++
Sbjct: 239 YVLYKGGTNCYLQDTMQVRDALSEVRPTVMSAVPRFYEKIFSAIHEKVSRAPFHRKIMFT 298
Query: 179 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 238
+ + A + +++PS + L + LA+KLV
Sbjct: 299 WAVNMGAKMAA---------CHQEKRKPSLM---------------LRKSYALADKLVLS 334
Query: 239 KIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 297
K+++ +G + GG L I F+ AIG+ V++GYG+TE++ ++ C S
Sbjct: 335 KLRALLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTATVSCWDDQCFDPSS 394
Query: 298 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 357
+G + ++KI E NE+L VRG VM+GY+K T++ DE G+L TG
Sbjct: 395 IGMAMPGAQVKI--GENNEIL---------VRGPMVMRGYYKMLEETEKTFDEHGFLKTG 443
Query: 358 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 417
D G+I + G L + R K+ + S G+ + P +E A + I QI VI
Sbjct: 444 DAGYIDEN----------GNLFITDRIKELMKTSNGKYIAPQVVEGAIGKDHFIEQIAVI 493
Query: 418 GQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLLYGELRKWT 469
++ A+IVP + + AK L+I + D EL K EK ++ L EL K+
Sbjct: 494 ADTRKFVSALIVPCYDSLEEYAKELNIAYHDRVELIKHHQIVEMLEKRVNDLQKELAKFE 553
Query: 470 SKCSFQIGP 478
F++ P
Sbjct: 554 QVKKFKLLP 562
>gi|254508749|ref|ZP_05120862.1| long-chain acyl-CoA synthetase [Vibrio parahaemolyticus 16]
gi|219548328|gb|EED25340.1| long-chain acyl-CoA synthetase [Vibrio parahaemolyticus 16]
Length = 602
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 138/473 (29%), Positives = 215/473 (45%), Gaps = 63/473 (13%)
Query: 24 VFSYDEIIDLGRESR----KAFSDSNDARKHYKYETIGSD----DIATYVYTSGTTGNPK 75
+ + E ID+G K F D ++ ++ E SD D+ T +YTSGTTG PK
Sbjct: 135 IVAMSESIDIGENEFALHWKQFVAKGDKQESHELEQRLSDANFDDLLTLIYTSGTTGQPK 194
Query: 76 GVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VR 134
GVML + N+ Q+ + D L LP HV+ERA +++ +G Y
Sbjct: 195 GVMLDYANIGAQLEGHDQRLSLTEDDVSLCFLPLSHVFERAWTFYVLYKGATNCYLQDTM 254
Query: 135 NLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIY 194
++D L +P M +VP YE ++S I +++ + R+V+ F +
Sbjct: 255 QVRDALSEVRPTVMSAVPRFYEKIFSAIHEKVAKAPFIRKVM--------FTWAVNMGAK 306
Query: 195 EGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SG 253
C +K PS L + LA+KLV K+++ +G + G
Sbjct: 307 MAVCHQEGRK-PSL---------------ALKKAYKLADKLVLSKLRALLGGRINFMPCG 350
Query: 254 GGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAE 313
G L I F+ AIG+ V++GYG+TE++ I+ C S+G + ++KI E
Sbjct: 351 GAKLDETIGRFFHAIGINVKLGYGMTETTATISCWDDQCFNPDSIGMAMPGAQVKI--GE 408
Query: 314 TNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRR 373
NE+L VRG VM+GY+K P T + DE G+L TGD G I +
Sbjct: 409 NNEIL---------VRGPMVMRGYYKMPEETAKTFDEHGFLKTGDAGHIDEN-------- 451
Query: 374 CGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 433
G L + R K+ + S G+ + P +E + I QI VI ++ A+IVP +
Sbjct: 452 --GNLFITDRIKELMKTSNGKYIAPQMVEGTIGKDHFIEQIAVIADTRKFVSALIVPCFD 509
Query: 434 EVLMAAKRLSIVHADASELSK--------EKTISLLYGELRKWTSKCSFQIGP 478
+ AK L+I + D EL K E+ ++ L EL K+ F++ P
Sbjct: 510 SLEEYAKELNIKYHDRVELIKHHQIVEMLEQRVNDLQKELAKFEQVKKFKLLP 562
>gi|431931379|ref|YP_007244425.1| AMP-forming long-chain acyl-CoA synthetase [Thioflavicoccus mobilis
8321]
gi|431829682|gb|AGA90795.1| AMP-forming long-chain acyl-CoA synthetase [Thioflavicoccus mobilis
8321]
Length = 606
Score = 167 bits (424), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 113/373 (30%), Positives = 186/373 (49%), Gaps = 48/373 (12%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 118
D++AT VYTSGTTG PKGVML+H+N+L + I+ D FLS LP H+ ER G
Sbjct: 187 DELATIVYTSGTTGRPKGVMLSHRNILFDAHASLTIIDCYQEDAFLSFLPLSHMLERTGG 246
Query: 119 YFI-FSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 176
Y++ G + Y+ +V + +DLQ +P MI+VP ++E +Y+ + +QI + R +
Sbjct: 247 YYLPMMAGSVVAYSRSVGQIAEDLQAIRPTAMIAVPRIFERVYTRLHEQIQGRPRSVRAL 306
Query: 177 ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLV 236
+RI + + G+ + +++
Sbjct: 307 FHLAVRIGWMRFEHGQGRRGWSPLLLLWPLLH------------------------KRVA 342
Query: 237 YKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLG 296
+ + G + VSGG ++P + + +G+ + GYGLTE+SPV++ N
Sbjct: 343 GRVLDKLGGRLRVAVSGGAAMPTEVAHLFIGLGLPIVQGYGLTETSPVVSVNSLQDNRPE 402
Query: 297 SVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNT 356
SVG P+ +++I D +E+L V+G M GY+ N +AT + +D GWL+T
Sbjct: 403 SVGIPLRGIQVRIGD--DDELL---------VKGPGNMLGYWNNHAATARMVDPAGWLHT 451
Query: 357 GDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVV 416
GD ++R G + + GR KD +VLS GE V P ++E A L+ Q++V
Sbjct: 452 GD-----------QARIEQGYIYITGRIKDILVLSNGEKVPPADMEMAIGLDPLVEQVLV 500
Query: 417 IGQDQRRPGAIIV 429
+G+ + GA++V
Sbjct: 501 VGEGRPFLGALVV 513
>gi|410895203|ref|XP_003961089.1| PREDICTED: long-chain-fatty-acid--CoA ligase 5-like isoform 1
[Takifugu rubripes]
Length = 683
Score = 167 bits (424), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 132/445 (29%), Positives = 206/445 (46%), Gaps = 62/445 (13%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYD-----IVPAENGDKFLSMLPPWHVY 113
DD++ +TSGTTGNPKG MLTH+N++ + IVP+ D +S LP H++
Sbjct: 254 DDLSIICFTSGTTGNPKGAMLTHENVVSDAAGVLKGFETTIVPSTE-DVTISFLPLAHMF 312
Query: 114 ERACGYFIFSRG--IELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSA 171
ER I+ G + +R L DD++ QP VP + +Y +Q
Sbjct: 313 ERVVQTVIYGAGGRVGFFQGDIRLLPDDMKTLQPTIFPVVPRLLNRVYDKVQ-------- 364
Query: 172 ARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLL 231
S A + FK+ F + R + + + LW
Sbjct: 365 ------------SGAKSPFKKWLLNFAVDRKYAEVKEGIVRNNSLW-------------- 398
Query: 232 AEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAI-GVKVQVGYGLTESSPVIAARR 289
+KL++ K+Q+++G + V+G + ++ F A+ G ++ GYG TE +
Sbjct: 399 -DKLIFNKVQASLGGRVRVMVTGAAPISPNVLTFLRAVLGCQIFEGYGQTECTAGCTFTM 457
Query: 290 PTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALD 349
P G VG P+ +K+VD E + +G V ++G V +GY K+P T +ALD
Sbjct: 458 PGDATAGHVGAPLPCNIVKLVDVEEMNYFASNGEGEVCIKGKNVFKGYLKDPEKTAEALD 517
Query: 350 EDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSS 409
+DGWL+TGDIG P GVL + R K+ L+ GE + P ++E +RS
Sbjct: 518 DDGWLHTGDIGKWLPS----------GVLKIIDRKKNIFKLAQGEYIAPEKIENVYVRSG 567
Query: 410 LIRQIVVIGQD-QRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK----EKTISLLYGE 464
L+ Q+ V G Q A+++PD E++ AK+L V EL K +K I +
Sbjct: 568 LVAQVFVHGDSLQSCLVAVVIPDPEDLPSFAKKLG-VQGSLKELCKNTEIKKAILSDMTK 626
Query: 465 LRKWTSKCSF-QIGPIHVVDEPFTV 488
L K SF Q+ I++ E FT+
Sbjct: 627 LGKEAGLKSFEQVKDIYLHPEQFTI 651
>gi|410099275|ref|ZP_11294247.1| hypothetical protein HMPREF1076_03425 [Parabacteroides goldsteinii
CL02T12C30]
gi|409219297|gb|EKN12260.1| hypothetical protein HMPREF1076_03425 [Parabacteroides goldsteinii
CL02T12C30]
Length = 633
Score = 167 bits (424), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 124/428 (28%), Positives = 217/428 (50%), Gaps = 51/428 (11%)
Query: 54 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 113
+++ +DD AT YTSGTT +PKGV+LTH+N + V ++ + L +LP H +
Sbjct: 172 QSLTNDDYATITYTSGTTADPKGVILTHRNYTANVEQSLTCVDIDDTWRTLVILPLDHCF 231
Query: 114 ERACGYFIFS-RG-----IELMYTAVRNLKD---DLQRYQPHYMISVPLVYETLYSGIQK 164
G++IF +G +++ T + LK+ +++ ++P+ ++SVP + + I++
Sbjct: 232 AHVVGFYIFMYKGASVATVQVGRTGMETLKNIPVNIKEFKPYLILSVPALAKNFKKNIEQ 291
Query: 165 QIFTSSAARRVVARAL-IRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICA 223
I A +V R + ++ AYT W +
Sbjct: 292 GI---RAQGNMVNRLFHMGLNVAYTY--------------NGDGGDDKGRGWRF------ 328
Query: 224 ILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESS 282
+L P+ L + +++ K++ G K + GG L + FY AIG+ + GYGL+E++
Sbjct: 329 LLKPVVSLFDSIIFSKVRENFGSELKFFIGGGALLDKDLQKFYYAIGLPMYQGYGLSEAT 388
Query: 283 PVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPS 342
PVI+ P + GS G + ++KI D E E LP G KG + +RG VM GY+KNP+
Sbjct: 389 PVISTNGPRHHRFGSSGVLVQPLDLKICDQEGKE-LPLGEKGEIVIRGENVMAGYWKNPA 447
Query: 343 ATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELE 402
+T + + +DGWL TGD+G++ G+L + GR K ++ S GE P +E
Sbjct: 448 STTETI-KDGWLYTGDMGYMGKD----------GLLYVLGRFKSLLIGSDGEKYSPEGIE 496
Query: 403 EAALR-SSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHAD-ASELSKEKTISL 460
EA + SS I Q+++ A++VP+K+ + + LS + D +E KE+ I +
Sbjct: 497 EALVEHSSCIDQLLLYNNQNPYTVALVVPNKDHL---KRHLSHLQLDLNTEKGKEEAIRI 553
Query: 461 LYGELRKW 468
+ ++ ++
Sbjct: 554 IQKQIDRF 561
>gi|213691339|ref|YP_002321925.1| AMP-dependent synthetase and ligase [Bifidobacterium longum subsp.
infantis ATCC 15697 = JCM 1222]
gi|384198457|ref|YP_005584200.1| putative long-chain-fatty acid CoA ligase [Bifidobacterium longum
subsp. infantis ATCC 15697 = JCM 1222]
gi|213522800|gb|ACJ51547.1| AMP-dependent synthetase and ligase [Bifidobacterium longum subsp.
infantis ATCC 15697 = JCM 1222]
gi|320457409|dbj|BAJ68030.1| putative long-chain-fatty acid CoA ligase [Bifidobacterium longum
subsp. infantis ATCC 15697 = JCM 1222]
Length = 607
Score = 167 bits (424), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 130/465 (27%), Positives = 218/465 (46%), Gaps = 69/465 (14%)
Query: 45 NDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLH----QIRSLYDIVPAENG 100
+D + + T+ +DD+AT VYTSG+TGNPKG LTHKN + ++L+++V ++
Sbjct: 168 SDEELNERVATVRADDLATIVYTSGSTGNPKGAELTHKNFVSITITASQALHEVV-LDDH 226
Query: 101 DKFLSMLPPWHVYERACGYFIFSR--GIELMYTAVRNLKDDLQRYQPHYMISVPLVYETL 158
+ L LP H + R Y + G+ ++L DL+ ++P Y++ VP V+E +
Sbjct: 227 PRLLLFLPLAHCFARFIQYASIASDDGVVGYLPDTKSLLPDLRSFEPTYLLGVPRVFEKV 286
Query: 159 YSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWA 218
Y+ + R V A + ++ ++ E ++ Y
Sbjct: 287 YNAASHKAGAGWKGRLFVKAA--EAARVWSRKEQAGEQHTFAEIAERAKY---------- 334
Query: 219 RIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDL--FYEAIGVKVQVGY 276
E LVY+ ++ A+G V+ GG+ P+ +DL FY IG+ + GY
Sbjct: 335 --------------ETLVYRTVRGALGPKIKYVACGGA-PLSLDLAHFYNGIGLPMIQGY 379
Query: 277 GLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQG 336
G+TE++ AA R T NV+G+VG P + I+I D +G ++V+G V +G
Sbjct: 380 GMTETAAPFAATRVTDNVIGTVGQPAPGSSIRISD-----------EGELQVKGPNVFRG 428
Query: 337 YFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENV 396
Y P T +A DGWL TGD+ I GR + + GR KD I+ + G+NV
Sbjct: 429 YHNLPEKTAEAFTADGWLRTGDLASI---DDEGR-------ITITGRIKDIIITAGGKNV 478
Query: 397 EPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVL--MAAKRLSIVHADASELSK 454
P+ LEE + ++ VV+G + GA++ D E + + A LS + + +
Sbjct: 479 SPIPLEEEIAKCPIVEHCVVVGDQRPFIGALVTLDPESLALWLPAHGLST----ETPVDR 534
Query: 455 EKTISLLYGELRKWTSKCSFQIG------PIHVVDEPFTVNFLCL 493
T + + E++++ K + + V+D FT CL
Sbjct: 535 LATNAAVREEIQQYVDKANATVSRAESVRKFAVLDTQFTQENKCL 579
>gi|296166052|ref|ZP_06848500.1| possible long-chain-fatty-acid--CoA ligase [Mycobacterium
parascrofulaceum ATCC BAA-614]
gi|295898591|gb|EFG78149.1| possible long-chain-fatty-acid--CoA ligase [Mycobacterium
parascrofulaceum ATCC BAA-614]
Length = 600
Score = 167 bits (424), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 117/386 (30%), Positives = 184/386 (47%), Gaps = 53/386 (13%)
Query: 52 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPA--ENGDKFLSMLPP 109
+ E + +DD AT +YTSGTTG PKG LTH NLL++ R + +P + G + L LP
Sbjct: 174 RQEGLRADDPATLIYTSGTTGRPKGCQLTHSNLLYETRGAKECLPTLLDEGQRLLIFLPL 233
Query: 110 WHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFT 168
HV R+ F+ + + +T+ ++NL ++P ++SVP V+E +Y+ ++
Sbjct: 234 AHVLARSLTLSAFANKVTVGFTSDIKNLLPMFAVFKPTVVVSVPRVFEKVYNTAEQNAVN 293
Query: 169 SSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPL 228
R A + ++ +++ +P L L
Sbjct: 294 DGKGRIFAAAVQAAVDWSQ------------AQDRGRPGPL---------------LRAK 326
Query: 229 HLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAA 287
H L ++LVY K+++A+G A VSGG L + FY +G+ + GYGLTE+S I
Sbjct: 327 HALFDRLVYHKLRAALGGECHASVSGGAPLGARLGHFYRGVGLTIHEGYGLTETSSAITV 386
Query: 288 RRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQA 347
+ +G+VG + ++I D G + VRG V GY++N AT+ A
Sbjct: 387 NQVGNVRIGTVGTLLPGNSMRIAD-----------DGELLVRGGVVFSGYWRNEQATRDA 435
Query: 348 LDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALR 407
DGW TGD+G + G L + GR K+ IV + G+NV P LE+
Sbjct: 436 F-TDGWFKTGDLGALDED----------GFLKITGRKKEIIVTAGGKNVAPAVLEDQLRA 484
Query: 408 SSLIRQIVVIGQDQRRPGAIIVPDKE 433
+LI Q +V+G + GA+I D E
Sbjct: 485 HALISQAMVVGDAKPFIGALITIDPE 510
>gi|403251222|ref|ZP_10917573.1| AMP-forming long-chain acyl-CoA synthetase [actinobacterium SCGC
AAA027-L06]
gi|402915430|gb|EJX36402.1| AMP-forming long-chain acyl-CoA synthetase [actinobacterium SCGC
AAA027-L06]
Length = 594
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 131/451 (29%), Positives = 215/451 (47%), Gaps = 59/451 (13%)
Query: 14 VAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGN 73
V P +++ +Y+ + L E + D R+ E + + +AT +YTSGTTG
Sbjct: 135 VLPSSCKKVWNITYNALATLTHEGKDVSEDEIAKRR----EKLKPETLATLIYTSGTTGK 190
Query: 74 PKGVMLTHKNLLHQ----IRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELM 129
PKGV LTH N L + + D+ G L LP HV+ R + G+ L
Sbjct: 191 PKGVQLTHGNFLSECGNVVNGASDLFLKPGGSTLL-FLPVAHVFGRMVQIGSITAGLHLA 249
Query: 130 YTA-VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYT 188
+ + + L DL ++P ++++VP ++E +++G + + +A + + ++ AY+
Sbjct: 250 HCSDLTKLPSDLASFKPTFVLAVPRIFEKIFNGAEAK--AQAAGKGKIFHKAAEVAIAYS 307
Query: 189 AFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS- 247
+ + K+ S L+ L H L +KLVY KI++ +G
Sbjct: 308 K----------SLDSKKISPLLKL---------------QHGLFDKLVYTKIRTGLGGRV 342
Query: 248 KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEI 307
+A +SGG L + FY G++V GYGLTE++ + + +GSVG PI T I
Sbjct: 343 EAAISGGAPLGERLGHFYRGAGIRVLEGYGLTETTAGATLNLTSAHRVGSVGKPIPGTTI 402
Query: 308 KIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHS 367
KI AE EVL ++G VMQGY++N +A K+ DG+ +GD+G I
Sbjct: 403 KI--AEDGEVL---------IKGPIVMQGYWQNDAANKEVFTSDGYFKSGDLGKIDEE-- 449
Query: 368 RGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAI 427
G L + GR K+ IV + G+NV P LE+ LI Q +V+G ++ A+
Sbjct: 450 --------GYLSIVGRKKELIVTAGGKNVAPAVLEDRLRSHPLISQCMVVGDNKPFIAAL 501
Query: 428 IVPDKEEVLMAAKRLSIVHADASELSKEKTI 458
I D + + A A ++L+K+ T+
Sbjct: 502 ITIDPDAIKPWAVANKKEGASIADLAKDPTL 532
>gi|312881741|ref|ZP_07741518.1| long-chain acyl-CoA synthetase [Vibrio caribbenthicus ATCC
BAA-2122]
gi|309370631|gb|EFP98106.1| long-chain acyl-CoA synthetase [Vibrio caribbenthicus ATCC
BAA-2122]
Length = 600
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 129/430 (30%), Positives = 199/430 (46%), Gaps = 55/430 (12%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 118
DD+ T +YTSGTTG PKGVML + N+ Q+ + D L LP HV+ERA
Sbjct: 178 DDLLTLIYTSGTTGKPKGVMLDYANVAAQLDGHNQRLSLTQDDVSLCFLPLSHVFERAWS 237
Query: 119 YFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 177
+++ +G Y +K L +P M +VP YE ++S I +++ + R+++
Sbjct: 238 FYVLYKGATNCYLQDTSAIKQALVEVRPTVMCAVPRFYEKIFSAIHEKVAKAPLVRKII- 296
Query: 178 RALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVY 237
F + C + K PS L L H LA+ +V
Sbjct: 297 -------FTWAVNMGAKLAHC-QQTGKTPSLL---------------LKKSHQLADSMVL 333
Query: 238 KKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLG 296
K++S +G + + GG L I F+ AIG+ V++GYG+TE+ I+ C
Sbjct: 334 SKLRSLVGGNINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETVATISCWDDGCFNPD 393
Query: 297 SVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNT 356
S+G P+ E+KI NE+L VRG VM+GY+K T++ D++G+L T
Sbjct: 394 SIGLPMPGAEVKI--GPNNEIL---------VRGPMVMRGYYKLAEETQKTFDDEGFLKT 442
Query: 357 GDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVV 416
GD G+I G + + R K+ + S G+ + P +E A + I QI V
Sbjct: 443 GDAGYIDDK----------GNVFITDRIKELMKTSGGKYIAPQVIEGAIGKDHFIEQIAV 492
Query: 417 IGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLLYGELRKW 468
I ++ A+IVP + + AK L+I + D EL K EK + L EL K+
Sbjct: 493 IADTRKFVSALIVPCYDALEDYAKDLNIKYHDKVELIKNNQIIEMLEKRVENLQKELAKF 552
Query: 469 TSKCSFQIGP 478
F++ P
Sbjct: 553 EQIKRFKLLP 562
>gi|313204617|ref|YP_004043274.1| amp-dependent synthetase and ligase [Paludibacter propionicigenes
WB4]
gi|312443933|gb|ADQ80289.1| AMP-dependent synthetase and ligase [Paludibacter propionicigenes
WB4]
Length = 600
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 124/441 (28%), Positives = 202/441 (45%), Gaps = 65/441 (14%)
Query: 27 YDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNL-- 84
Y + + +G +S K F +++ D+A +YTSGTTGNPKGVM+ H
Sbjct: 153 YSDFLLIGEKSTKHF------EVDHRHSETSESDLACILYTSGTTGNPKGVMMPHSCFTE 206
Query: 85 ---LHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVR--NLKDD 139
+H IR + + D ++ LP HV+ER YF +G+ + Y +R ++
Sbjct: 207 AMRIHNIR----LTSITDKDTSIAFLPLSHVFERTWCYFCIFKGVTI-YINLRPTEIQQT 261
Query: 140 LQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCL 199
++ P M +VP +E +Y+G+++ + S V I++A KR +
Sbjct: 262 IKDVHPTLMCAVPRFWEKVYAGVKENLSKYSPIMLGV------IAWAVATGKR--HNVDI 313
Query: 200 TRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV--SGGGSL 257
R KQP + + +A+KL++ K++ +GI A + + G L
Sbjct: 314 LRKGKQPDVFLKF---------------GYSIADKLIFSKVKETLGIENANMLPTAGAKL 358
Query: 258 PMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEV 317
I LF+ +IGV + GYGLTES+ + +G+VG+ + +KI D NE+
Sbjct: 359 SDEIALFFRSIGVPIVYGYGLTESTATVCCYEYVGYEIGTVGNIMPDVSVKIGD--DNEI 416
Query: 318 LPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGV 377
L ++G + GY+ NP A + EDGW TGD G+I +
Sbjct: 417 L---------LKGKTIFPGYYNNPEANAASFTEDGWFKTGDAGYIKDNK----------- 456
Query: 378 LVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLM 437
+VL R KD S G+ + P E+E I Q+ VIG ++ AII P+ +
Sbjct: 457 IVLTERIKDLFKTSNGKYIAPQEIETRLALDKYIEQVAVIGDERNYVTAIIAPNIPALEE 516
Query: 438 AAKRLSIVHADASELSKEKTI 458
A++ SI + + +L K I
Sbjct: 517 YAQKHSITYENIDDLLKSPKI 537
>gi|416052822|ref|ZP_11578457.1| putative long-chain-fatty-acid--CoA ligase-like protein
[Aggregatibacter actinomycetemcomitans serotype e str.
SC1083]
gi|347991614|gb|EGY33077.1| putative long-chain-fatty-acid--CoA ligase-like protein
[Aggregatibacter actinomycetemcomitans serotype e str.
SC1083]
Length = 595
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 126/430 (29%), Positives = 202/430 (46%), Gaps = 55/430 (12%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 118
+D+ T +YTSGTTG PKGVML + NL HQ+++ + ++ D LS LP H++ERA
Sbjct: 177 EDLFTLIYTSGTTGEPKGVMLDYANLAHQLKAHDQALQVDDTDVSLSFLPLSHIFERAWV 236
Query: 119 YFIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 177
++ RG Y N ++ L +P M +VP YE +Y+ I ++ + R+ +
Sbjct: 237 AYVLHRGATNCYIEDTNQVRAALMEIRPTLMCAVPRFYEKIYAAILDKVHNAPKLRQWI- 295
Query: 178 RALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVY 237
++A ++ ++ L + QK I +L H LA+KLV
Sbjct: 296 -----FNWAIAVGRKHFDA--LAKQQK----------------IGFLLKQQHALADKLVL 332
Query: 238 KKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLG 296
K+++ +G + GG L I LF+ +IG+ +++GYG+TE++ ++
Sbjct: 333 GKLRALLGGRIRMMPCGGAKLEPTIGLFFHSIGLNIKLGYGMTETTATVSCWNDFNFNAN 392
Query: 297 SVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNT 356
S+G + E+KI E NE+L VRG VM+GY+K P T DG+L T
Sbjct: 393 SIGTLMPGAEVKI--GENNEIL---------VRGGMVMKGYYKKPQETADTFTTDGFLKT 441
Query: 357 GDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVV 416
GD G G L + R K+ + + G+ + P LE + I QI V
Sbjct: 442 GDAG----------EFDADGNLYITDRIKELMKTANGKYIAPQVLESKIGKDKFIEQIAV 491
Query: 417 IGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLLYGELRKW 468
I ++ A+IVP + AK+++I + D EL + E+ I+ L EL W
Sbjct: 492 IADAKKYVSALIVPCYAALEDYAKQVNIKYQDRLELLRNSEIIQMLERRINELQKELAGW 551
Query: 469 TSKCSFQIGP 478
F + P
Sbjct: 552 EQIKRFTLLP 561
>gi|423343693|ref|ZP_17321406.1| hypothetical protein HMPREF1077_02836 [Parabacteroides johnsonii
CL02T12C29]
gi|409214715|gb|EKN07724.1| hypothetical protein HMPREF1077_02836 [Parabacteroides johnsonii
CL02T12C29]
Length = 634
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 130/468 (27%), Positives = 234/468 (50%), Gaps = 57/468 (12%)
Query: 18 IVEEIPV-----FSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTG 72
+++E+P S+ E++ +G+E + S + +++ + D AT YTSGTT
Sbjct: 134 VIDELPEHKEKEISWSEVLRMGKEYLASHSLEDFLAVG---QSLQNGDYATITYTSGTTA 190
Query: 73 NPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIF-SRG-----I 126
+PKGV+LTH+N + V ++ + L +LP H + G++IF S+G +
Sbjct: 191 DPKGVILTHRNYTANVEQALSCVDIDDTWRTLVILPLDHCFAHVVGFYIFMSKGASVATV 250
Query: 127 ELMYTAVRNLKD---DLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRI 183
++ T + LK+ +++ ++P+ ++SVP + + I++ I R + + R+
Sbjct: 251 QVGRTGLETLKNIPVNIKEFKPYLILSVPALAKNFKKNIEQGI-------RAQGKHVTRL 303
Query: 184 SFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSA 243
IY G + +L L PL L +++++ K++
Sbjct: 304 FNFALKVAYIYNGDGGEDKGRGTRFL---------------LKPLVSLFDRVLFTKVREN 348
Query: 244 IGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPI 302
G K + GG L + FY AIG+ + GYGL+E++PVI+ P + GS G +
Sbjct: 349 FGGQLKFFIGGGALLDKDLQKFYYAIGLPMYQGYGLSEATPVISTNGPHRHTFGSSGVLV 408
Query: 303 NHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWI 362
++KI DA+ E LP G KG + +RG VM GY+KNP +T + + + WL TGD+G++
Sbjct: 409 RPLDLKICDADGKE-LPTGEKGEIVIRGENVMAGYWKNPVSTAETV-RNRWLYTGDMGYM 466
Query: 363 APHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALR-SSLIRQIVVIGQDQ 421
H G+L + GR K ++ S GE P +EEA + SS I Q+++
Sbjct: 467 G--HD--------GLLYVLGRFKSLLIGSDGEKYSPEGIEEALVEHSSCIDQLILYNNQS 516
Query: 422 RRPGAIIVPDKEEVLMAAKRLSIVHAD-ASELSKEKTISLLYGELRKW 468
A++VP+K+ + K L+ H D +S+ +E+ I ++ ++ ++
Sbjct: 517 PYTVALVVPNKDRL---KKHLAHQHLDLSSDKGREEAIRIIQSQIDRF 561
>gi|424039094|ref|ZP_17777540.1| AMP-binding enzyme family protein, partial [Vibrio cholerae
HENC-02]
gi|408893373|gb|EKM30590.1| AMP-binding enzyme family protein, partial [Vibrio cholerae
HENC-02]
Length = 525
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 121/407 (29%), Positives = 195/407 (47%), Gaps = 47/407 (11%)
Query: 44 SNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKF 103
S+ A + E +D+ T +YTSGTTG PKGVML + N+ Q+ + + D
Sbjct: 163 SHQAELETRLEHAQEEDLLTLIYTSGTTGQPKGVMLDYANISAQLEGHDERLSLTEDDVS 222
Query: 104 LSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLYSGI 162
L LP HV+ERA +++ +G Y ++D L +P M +VP YE ++S I
Sbjct: 223 LCFLPLSHVFERAWTFYVLYKGGTNCYLQDTMQVRDALSEVRPTVMSAVPRFYEKIFSAI 282
Query: 163 QKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIIC 222
+++ + R+++ + + A C N+K PS +
Sbjct: 283 HEKVSRAPFHRKIMFTWAVNMGAKMAA--------CHQENRK-PSLM------------- 320
Query: 223 AILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTES 281
L + LA+KLV K+++ +G + GG L I F+ AIG+ V++GYG+TE+
Sbjct: 321 --LRKSYALADKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTET 378
Query: 282 SPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNP 341
+ ++ C S+G + ++KI E NE+L VRG VM+GY+K P
Sbjct: 379 TATVSCWDDQCFDPSSIGMAMPGAQVKI--GENNEIL---------VRGPMVMRGYYKMP 427
Query: 342 SATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLEL 401
T++ DE G+L TGD G+I + G L + R K+ + S G+ + P +
Sbjct: 428 EETEKTFDEHGFLKTGDAGYIDEN----------GNLFITDRIKELMKTSNGKYIAPQVV 477
Query: 402 EEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHAD 448
E A + I QI VI ++ A+IVP + + AK L+I + D
Sbjct: 478 EGAIGKDHFIEQIAVIADTRKFVSALIVPCYDSLEEYAKELNIKYHD 524
>gi|422336959|ref|ZP_16417931.1| long-chain-fatty-acid-CoA ligase [Aggregatibacter aphrophilus
F0387]
gi|353345511|gb|EHB89802.1| long-chain-fatty-acid-CoA ligase [Aggregatibacter aphrophilus
F0387]
Length = 595
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 127/430 (29%), Positives = 200/430 (46%), Gaps = 55/430 (12%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 118
+D+ T +YTSGTTG PKGVML + NL HQ+++ + ++ D LS LP H++ERA
Sbjct: 177 EDLFTLIYTSGTTGEPKGVMLDYANLAHQLKAHDQALKVDDSDVSLSFLPLSHIFERAWV 236
Query: 119 YFIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 177
++ RG Y N ++ L +P M +VP YE +Y+ I ++ + R+ +
Sbjct: 237 AYVLHRGAANCYIEDTNQVRSALTEIRPTLMCAVPRFYEKIYTAILDKVHNAPKLRQWIF 296
Query: 178 RALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVY 237
+ I + L + QK I +L + LA KLV
Sbjct: 297 HWAMAIGHQHFD--------ALAKGQK----------------IGFLLKQQYSLANKLVL 332
Query: 238 KKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLG 296
K+++ +G + GG L I LF+ +IG+ +++GYG+TE++ ++
Sbjct: 333 GKLRALLGGRIRMMPCGGAKLEPTIGLFFHSIGLNIKLGYGMTETTATVSCWDDVNFNAN 392
Query: 297 SVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNT 356
S+G + E+KI E NE+L VRG VM+GY+K P T +A DG+L T
Sbjct: 393 SIGSLMPGAEVKI--GENNEIL---------VRGGMVMKGYYKKPQETAEAFTADGFLKT 441
Query: 357 GDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVV 416
GD G + + L + R K+ + S G+ + P LE + I QI V
Sbjct: 442 GDAGEFDANSN----------LYITDRIKELMKTSNGKYIAPQVLESKIGKDKFIEQIAV 491
Query: 417 IGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLLYGELRKW 468
I ++ A+IVP + AK+++I + D EL K E+ I+ L EL W
Sbjct: 492 IADAKKYVSALIVPCYTALEEYAKQVNIKYQDRLELLKNSEIIQMLERRINDLQKELAGW 551
Query: 469 TSKCSFQIGP 478
F + P
Sbjct: 552 EQIKRFTLLP 561
>gi|377568695|ref|ZP_09797872.1| putative fatty-acid--CoA ligase [Gordonia terrae NBRC 100016]
gi|377534072|dbj|GAB43037.1| putative fatty-acid--CoA ligase [Gordonia terrae NBRC 100016]
Length = 609
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 124/414 (29%), Positives = 207/414 (50%), Gaps = 58/414 (14%)
Query: 53 YETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHV 112
++ + DD+AT +YTSGTTG PKGV +TH+N++ ++ +L +IV A D+ +S LP H+
Sbjct: 172 WQAVQPDDLATLIYTSGTTGPPKGVEITHRNIVAEMAALAEIVQAGFDDRAISYLPAAHI 231
Query: 113 YERACGYFI-FSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSS 170
+R + RGI++ R + L P + VP V++ + +GI+ ++ S
Sbjct: 232 ADRVSSHAANMMRGIQITTVPDPREIAAALPDVHPTFFFGVPRVWQKIRAGIEAKLAEES 291
Query: 171 AARRVVARALIRISF---AYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWP 227
+ V +AL +F A TA R+ EG K+ L
Sbjct: 292 SP---VKKALAGWAFGVGASTAQARV-EG-------KKSGGLA----------------- 323
Query: 228 LHLLAEKLVYKKIQSAIGISKAGVSGGG--SLPMHIDLFYEAIGVKVQVGYGLTESSPVI 285
H LA++LV K+++A+G+ + +G G ++P + F+ +G+ V +G++E++ V
Sbjct: 324 -HGLADRLVLHKVRTALGLDQVSFAGSGAAAIPPEVLKFFLGLGIPVLEVWGMSETTGVS 382
Query: 286 AARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATK 345
+G+VG P+ E+K+ D G + VRG VM+GY K P T
Sbjct: 383 TMTTSDNLRIGTVGTPVRGMEVKLAD-----------DGELLVRGPVVMRGYRKQPDKTA 431
Query: 346 QALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEA- 404
+ +D DGWL+TGDI I G V +++ R K+ ++ +G+N+ P +E A
Sbjct: 432 ETIDADGWLSTGDIATI---------DDDGNVTIVD-RKKELMINESGKNMSPTNIENAM 481
Query: 405 ALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTI 458
SSLI Q+ IG + A++V D + AK+L + AD +ELS +
Sbjct: 482 KAASSLIGQVAAIGDARPYVSALVVLDPDAAAARAKKLDLSGADLTELSSHPEV 535
>gi|260771944|ref|ZP_05880862.1| long-chain-fatty-acid--CoA ligase [Vibrio metschnikovii CIP 69.14]
gi|260613236|gb|EEX38437.1| long-chain-fatty-acid--CoA ligase [Vibrio metschnikovii CIP 69.14]
Length = 601
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 134/464 (28%), Positives = 217/464 (46%), Gaps = 62/464 (13%)
Query: 25 FSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNL 84
F++ + I G +++A + A+ +Y DD+ T +YTSGTTG PKGVML ++N+
Sbjct: 151 FTWSDFIAQGSTAQQAELSARIAKANY-------DDLYTLIYTSGTTGQPKGVMLDYRNI 203
Query: 85 LHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMY-TAVRNLKDDLQRY 143
Q+ + + D L LP HV+ERA ++ +G +Y V +++ L
Sbjct: 204 GAQLEGHDQRLTLSDQDISLCFLPLSHVFERAWSCYVLYKGATNVYLQEVSQVREALSEV 263
Query: 144 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQ 203
+P M +VP YE ++S I +++ + R+ + F + C N
Sbjct: 264 RPTVMCAVPRFYEKIFSAIHEKVAKAPFHRKAL--------FTWAVNMGAKMALCRQEN- 314
Query: 204 KQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHID 262
+QPS WL R + LA+KLV K+++ +G + GG L I
Sbjct: 315 RQPS-------WLLVRS--------YQLADKLVLVKLRALLGGRIHFMPCGGAKLDETIG 359
Query: 263 LFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGS 322
F+ AIG+ V++GYG+TE++ ++ S+G + + ++KI E NE+L
Sbjct: 360 RFFHAIGINVKLGYGMTETTATVSCWNDHQFNPDSIGISMPNVQLKI--GENNEIL---- 413
Query: 323 KGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEG 382
VRG VM+GY+K P T + DE G+L TGD G I + G + +
Sbjct: 414 -----VRGPMVMRGYYKMPQETANSFDEQGFLKTGDAGHIDEY----------GNVFITD 458
Query: 383 RAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRL 442
R K+ + S G+ + P +E + I QI VI ++ A+IVP + + AK L
Sbjct: 459 RIKELMKTSNGKYIAPQLVEGTIGKDHFIEQIAVIADTRKFVSALIVPCFDTLESYAKEL 518
Query: 443 SIVHADASELSK--------EKTISLLYGELRKWTSKCSFQIGP 478
+I + D EL K EK + L L K+ F++ P
Sbjct: 519 NIKYHDRLELIKHSQVLEMFEKRVHDLQQGLAKFEQVKQFKLLP 562
>gi|405980028|ref|ZP_11038369.1| hypothetical protein HMPREF9241_01092 [Actinomyces turicensis
ACS-279-V-Col4]
gi|404391403|gb|EJZ86467.1| hypothetical protein HMPREF9241_01092 [Actinomyces turicensis
ACS-279-V-Col4]
Length = 627
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 122/387 (31%), Positives = 182/387 (47%), Gaps = 53/387 (13%)
Query: 52 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVP---AENGDKFLSMLP 108
+ E + DDIAT VYTSGT G PKG +L+H+N + + + +P A + L LP
Sbjct: 197 RSEALTKDDIATIVYTSGTMGTPKGAVLSHENFTNLCLNAHSWMPEIAAGKDSRLLLFLP 256
Query: 109 PWHVYERACGYF-IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIF 167
HV+ R F I G+ + ++NL +DL ++P Y++ VP V E +Y+ +
Sbjct: 257 LAHVFARFLQVFQISGNGVLGHASNIKNLLNDLASFKPSYLLVVPRVLEKIYNSADTK-- 314
Query: 168 TSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWP 227
+S +R + R +I+ AY+ EG PS A L
Sbjct: 315 -ASGPKRKIFRWAAKIAIAYSRALDTEEG---------PS---------------ASLKA 349
Query: 228 LHLLAEKLVYKKIQSAI-GISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIA 286
H LA KLVY++I + G + VSGG L + FY +G+ V GYGLTE+ ++
Sbjct: 350 QHALANKLVYQQIIRLVGGNADYIVSGGAPLATWLAHFYRGVGIPVLEGYGLTETVGPVS 409
Query: 287 ARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQ 346
P + +G+VG + KI D +G + ++G + Q Y +P AT
Sbjct: 410 VNTPHLSKIGTVGPALPPMSFKISD-----------EGEILLKGPSIFQYYHNDPEATTA 458
Query: 347 ALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAAL 406
EDGW TGD+G S G + + GRAK+ IV + G+NV P LE
Sbjct: 459 CFTEDGWFRTGDLG----------SLDRDGYVSITGRAKEIIVTAGGKNVAPAVLENPMR 508
Query: 407 RSSLIRQIVVIGQDQRRPGAIIVPDKE 433
LI Q++V+G + A+I D E
Sbjct: 509 SHPLISQVLVVGDQRPFIAALITLDAE 535
>gi|253988580|ref|YP_003039936.1| long-chain-fatty-acid--CoA ligase [Photorhabdus asymbiotica]
gi|253780030|emb|CAQ83191.1| long-chain-fatty-acid--CoA ligase [Photorhabdus asymbiotica]
Length = 600
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 136/474 (28%), Positives = 224/474 (47%), Gaps = 61/474 (12%)
Query: 13 SVAPDIVEEIPVFSY----DEIIDLGRESRKA-----FSDSNDARKHYKYET-IGS---D 59
+A ++E P S+ DE +DL R+ A F N + + ET I + D
Sbjct: 123 DIAITLIECCPQLSHIIVLDESVDL-RDCSLAQHLSDFITDNKLQHQSELETRIANRSLD 181
Query: 60 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGY 119
D+ T +YTSGTTG PKGVML +++L +Q+ S +++ D LS LP H++ERA +
Sbjct: 182 DLFTLIYTSGTTGEPKGVMLDYRSLAYQLYSHDNVLTLTELDVSLSFLPLSHIFERAWSF 241
Query: 120 FIFSRGIELMYTAVRNL-KDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 178
++ G + +Y N + + +P M +VP YE +YS + +++ + RR +
Sbjct: 242 YVMHTGAQNVYLTDTNFVRQAMAVIRPTVMCAVPRFYEKIYSAVFEKVSKAPWHRRKL-- 299
Query: 179 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 238
++A KR L + Q + S LW++ + H LA+KLV
Sbjct: 300 ----FNWAIECGKRQ----VLRKLQGEKS-------CLWSKAV-------HRLADKLVLS 337
Query: 239 KIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 297
K+++ +G + + G L I LF+ A+GV ++ GYG+TE+ ++ VLGS
Sbjct: 338 KLRNVLGGRVRFLPAAGARLDETIILFFLAVGVNIKYGYGMTETCATVSCWGEQGYVLGS 397
Query: 298 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 357
+G P+ +++I G ++VRG VM+GYF T + EDGWL TG
Sbjct: 398 IGTPMPGIDVRI-----------GEDDEIQVRGPIVMKGYFNQQEETTRTFTEDGWLRTG 446
Query: 358 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 417
D G + + G L + R KD + S G+ V P +E + I + VI
Sbjct: 447 DAGKLDEN----------GNLFITERLKDLMKTSNGKYVAPQMIESTLGQDRFIEHVAVI 496
Query: 418 GQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSK 471
++ A+IVP + + AK +++ + D EL I ++ + K K
Sbjct: 497 ADARKFVSALIVPCYDALEEYAKSVNLKYHDRVELLSNSHIVAMFEQRLKEIQK 550
>gi|296453576|ref|YP_003660719.1| AMP-dependent synthetase and ligase [Bifidobacterium longum subsp.
longum JDM301]
gi|296183007|gb|ADG99888.1| AMP-dependent synthetase and ligase [Bifidobacterium longum subsp.
longum JDM301]
Length = 607
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 117/401 (29%), Positives = 193/401 (48%), Gaps = 57/401 (14%)
Query: 45 NDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLH----QIRSLYDIVPAENG 100
+D + + T+ +DD+AT VYTSG+TGNPKG LTHKN + ++L+++V ++
Sbjct: 168 SDEELNERVATVRADDLATIVYTSGSTGNPKGAELTHKNFVSITITASQALHEVV-LDDH 226
Query: 101 DKFLSMLPPWHVYERACGYFIFSR--GIELMYTAVRNLKDDLQRYQPHYMISVPLVYETL 158
+ L LP H + R Y + G+ + L DL+ ++P Y++ VP V+E +
Sbjct: 227 PRLLLFLPLAHCFARFIQYASIASDDGVVGYLPDTKTLLPDLRSFEPTYLLGVPRVFEKV 286
Query: 159 YSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWA 218
Y+ + R V A + ++ ++ E ++ Y
Sbjct: 287 YNAASHKAGAGWKGRLFVKAA--EAARVWSRKEQAGEQHTFAEIAERAKY---------- 334
Query: 219 RIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDL--FYEAIGVKVQVGY 276
E LVY+ ++ A+G V+ GG+ P+ +DL FY IG+ + GY
Sbjct: 335 --------------ETLVYRTVRGALGPKIKYVACGGA-PLSLDLAHFYNGIGLPMIQGY 379
Query: 277 GLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQG 336
G+TE++ AA R T NV+G+VG P + I+I D +G ++V+G V +G
Sbjct: 380 GMTETAAPFAATRVTDNVIGTVGQPAPGSSIRISD-----------EGELQVKGPNVFRG 428
Query: 337 YFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENV 396
Y P T +A DGWL TGD+ I G +++ GR KD I+ + G+NV
Sbjct: 429 YHNLPEKTAEAFTADGWLRTGDLAEIDD----------AGRIIITGRIKDIIITAGGKNV 478
Query: 397 EPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLM 437
P+ LEE + ++ VV+G + GA++ D E + +
Sbjct: 479 SPIPLEEEIAKCPIVEHCVVVGDQRPFIGALVTLDPESLAI 519
>gi|429731164|ref|ZP_19265804.1| AMP-binding enzyme [Corynebacterium durum F0235]
gi|429146317|gb|EKX89374.1| AMP-binding enzyme [Corynebacterium durum F0235]
Length = 638
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 130/425 (30%), Positives = 199/425 (46%), Gaps = 65/425 (15%)
Query: 45 NDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYD------IVPAE 98
+D + + S D+A+ VYTSGTTG PKG LTH N L Q+R+L VP
Sbjct: 202 SDDEVRARIDATDSSDLASLVYTSGTTGRPKGCRLTHHNWLAQVRALLTHPIGAIAVP-- 259
Query: 99 NGDKFLSMLPPWHVYERACGYFIFSRG-IELMYTAVRNLKDDLQRYQPHYMISVPLVYET 157
G + L+ LP HV RA + G + ++ +L + QR +P+ ++ VP V+E
Sbjct: 260 -GTRVLTFLPLAHVLSRAVSLAVAIGGATQSHWSDFSSLSVEFQRARPNMILGVPRVFEK 318
Query: 158 LYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLW 217
+ +G + R R++ Y+ EG PS + +
Sbjct: 319 VRNGAAANAQDNGPLRAAAFAQAERVAQDYSRALDTPEG---------PSRALRM----- 364
Query: 218 ARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGY 276
H + +KLVY KI++A+G S K +SGG ++ + F+ +GV V GY
Sbjct: 365 ----------KHAMFDKLVYSKIRAAMGASVKYCISGGSAMSPDLLHFFRGMGVTVYEGY 414
Query: 277 GLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQG 336
GLTE++ AA NV+GSVG P+ +I D G + +RG + G
Sbjct: 415 GLTETTAA-AAVNFDDNVIGSVGRPVGGMSARIND-----------DGEILLRGETLFDG 462
Query: 337 YFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENV 396
Y+ N AT + +D++GW NTGD+G + G +V+ GR KD IV + G+NV
Sbjct: 463 YWNNSEATAENIDQEGWFNTGDLGELLD----------SGHIVITGRKKDLIVTAGGKNV 512
Query: 397 EPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEK 456
P LE+ LI Q +V+G + G +I D+ A KR + H + + +
Sbjct: 513 SPGPLEDRLRSHPLISQALVVGDGKPYVGVLIALDE----AALKRWKLTH----NIPESR 564
Query: 457 TISLL 461
T+S L
Sbjct: 565 TVSEL 569
>gi|383820039|ref|ZP_09975299.1| AMP-dependent synthetase and ligase [Mycobacterium phlei
RIVM601174]
gi|383335859|gb|EID14280.1| AMP-dependent synthetase and ligase [Mycobacterium phlei
RIVM601174]
Length = 599
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 132/414 (31%), Positives = 198/414 (47%), Gaps = 60/414 (14%)
Query: 26 SYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLL 85
+ D +I+ G+ A D + I + D AT +YTSGTTG PKGV LTH NL+
Sbjct: 155 ALDALIEAGKSVDPAELDK-------RLAGIRASDPATLIYTSGTTGQPKGVQLTHSNLV 207
Query: 86 HQIRSLYDIVPA--ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQR 142
H+IR + PA G+K L LP HV RA F+ + L +T+ ++NL
Sbjct: 208 HEIRGDKECFPAMLAKGEKMLMFLPLAHVLARAITLAAFTYKVTLGFTSDIKNLVPTFAV 267
Query: 143 YQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRN 202
++P ++SVP V+E +Y+ +Q R+ A A A TA + + ++
Sbjct: 268 FKPTLVVSVPRVFEKVYN-TAEQNAEDGGKGRIFALA------AKTAIE-----WSQAQD 315
Query: 203 QKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHI 261
P L+ L H + +KLVY K+++A+G +A +SGG L +
Sbjct: 316 AGGPGLLLRL---------------RHAVFDKLVYGKLRAALGGECRAAISGGAPLGARL 360
Query: 262 DLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAG 321
FY +G+ + GYGLTE+S I R +GSVG + ++I D +E+L
Sbjct: 361 GHFYRGVGLTIYEGYGLTETSAAITVNRIGDLKIGSVGKLVPGNSMRIND--DDELL--- 415
Query: 322 SKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLE 381
V+G V GY++N T A+ DGW +TGD+G I G L +
Sbjct: 416 ------VKGGVVFAGYWRNEEET-NAVFSDGWFHTGDLGRIDED----------GFLTII 458
Query: 382 GRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 435
GR K+ IV + G+NV P LE+ LI Q + +G + GA+I D E +
Sbjct: 459 GRKKEIIVTAGGKNVAPAILEDRLRAHPLISQAMAVGDGKPFIGALITIDPEAI 512
>gi|387790007|ref|YP_006255072.1| AMP-forming long-chain acyl-CoA synthetase [Solitalea canadensis
DSM 3403]
gi|379652840|gb|AFD05896.1| AMP-forming long-chain acyl-CoA synthetase [Solitalea canadensis
DSM 3403]
Length = 637
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 117/402 (29%), Positives = 202/402 (50%), Gaps = 70/402 (17%)
Query: 54 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPA-ENGDKFLSMLPPWHV 112
E + +D+++ +YTSGTTG PKG MLTH N + +++ + +P D FLS LP HV
Sbjct: 185 EMVQPEDLSSLIYTSGTTGTPKGAMLTHYNFVSNVKACLEQIPGIVPEDVFLSFLPLSHV 244
Query: 113 YERACGYFI---------FSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQ 163
+ER Y + F++ +EL L ++ +P M VP + E + +
Sbjct: 245 FERTATYHVCCTVGSSIAFAQSLEL-------LGKNMMEVKPTIMSVVPRLLERI---TE 294
Query: 164 KQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICA 223
K + + ++A ++ + +A+ K + R +++ +
Sbjct: 295 KAVKSGTSAGGFKSKIFL---WAFEVGKEV-------RQKREAG--------------SS 330
Query: 224 ILWPLHL---LAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLT 279
+ +PL + LAEKLV+ KI+ G + K +SGG +LP ++ F+ +G+K+ GYGLT
Sbjct: 331 VGFPLSVKATLAEKLVFSKIKEKTGGNLKFMISGGAALPKNVGEFFGNLGIKILEGYGLT 390
Query: 280 ESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPA-----------GSKGIVKV 328
E++PV+A V+G+VG I + I + +T E++ ++G + V
Sbjct: 391 ETAPVMAVTEFHRQVIGTVGRIIPGIVVAIQNTDTKEIVTKQTHESFDPNFESAEGEIIV 450
Query: 329 RGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTI 388
+G VM+GY+ P TK +D +GW +TGD+G + G L + R K+ +
Sbjct: 451 KGHCVMKGYWNQPEETKFVIDNEGWFHTGDVG-----------KFNKGNLQITDRIKNIL 499
Query: 389 VLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVP 430
+ S G+N+ P ++E L+S+ I QI +IG + AI+VP
Sbjct: 500 INSYGKNIYPTQVENIYLKSTRIEQIFLIGDKRDYLTAIVVP 541
>gi|189464499|ref|ZP_03013284.1| hypothetical protein BACINT_00841 [Bacteroides intestinalis DSM
17393]
gi|189438289|gb|EDV07274.1| AMP-binding enzyme [Bacteroides intestinalis DSM 17393]
Length = 604
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 129/440 (29%), Positives = 210/440 (47%), Gaps = 56/440 (12%)
Query: 58 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSM--LPPWHVYER 115
DD+A +YTSGTTG PKGVML H N + R ++DI + D+ +SM LP HV+E+
Sbjct: 182 DDDLANILYTSGTTGEPKGVMLHHSNYMEAFR-IHDIRLVDMTDQDVSMNFLPLTHVFEK 240
Query: 116 ACGYFIFSRGIELMYTAVR--NLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 173
A Y +G+++ +R +++ ++ +P M SVP +E +Y+G+Q++I + +
Sbjct: 241 AWTYLCIHKGVQICIN-LRPVDIQTTIKEIRPTLMCSVPRFWEKVYAGVQEKIAQETGLK 299
Query: 174 RVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAE 233
+ + I++ +I+ L + + P L++ L + E
Sbjct: 300 KAMMLDAIKVG-------KIHNIDYLRKGKTPP-----LMNQLKYK-----------FYE 336
Query: 234 KLVYKKIQSAIGISKAGV--SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPT 291
K VY ++ IGI + G ++P I F ++G+ + VGYGLTES+ ++
Sbjct: 337 KTVYALLKKTIGIENGNFFPTAGAAVPDEICEFVHSVGINMLVGYGLTESTATVSCFLNE 396
Query: 292 CNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDED 351
+GSVG + E+KI E NE+L +RG + +GY+K AT A+D+D
Sbjct: 397 GYEIGSVGTIMPDVEVKI--GEENEIL---------LRGKTITKGYYKKAEATAAAIDKD 445
Query: 352 GWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLI 411
GW +TGD G++ G L L R KD S G+ V P LE I
Sbjct: 446 GWFHTGDAGYLK-----------GDQLYLTERIKDLFKTSNGKYVSPQALETKLAIDRYI 494
Query: 412 RQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKE-KTISLLYGELRKWTS 470
QI +I ++ A+IVP V AK I + + EL + K I L +
Sbjct: 495 DQIAIIADQRKFVSALIVPVYGFVKDYAKEKGIEYKNMEELLQHPKVIGLFRARIDTLQQ 554
Query: 471 KCSF--QIGPIHVVDEPFTV 488
+ + Q+ ++ EPF++
Sbjct: 555 QFAHYEQVKRFTLLPEPFSM 574
>gi|322834433|ref|YP_004214460.1| AMP-dependent synthetase/ligase [Rahnella sp. Y9602]
gi|384259655|ref|YP_005403589.1| AMP-dependent synthetase/ligase [Rahnella aquatilis HX2]
gi|321169634|gb|ADW75333.1| AMP-dependent synthetase and ligase [Rahnella sp. Y9602]
gi|380755631|gb|AFE60022.1| AMP-dependent synthetase/ligase [Rahnella aquatilis HX2]
Length = 598
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 123/434 (28%), Positives = 209/434 (48%), Gaps = 50/434 (11%)
Query: 60 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGY 119
D+ T +YTSGTTG KGVML ++++ Q+ + D L LP HV+ERA +
Sbjct: 180 DLFTLIYTSGTTGEAKGVMLDYRSMATQLMQHERRLSISEHDVSLCFLPLAHVFERAWSF 239
Query: 120 FIFSRGIELMYTAVRNL-KDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 178
F+ G + ++ +L +D LQ +P M +VP YE ++S I ++ + ++
Sbjct: 240 FVMHCGAQNVFLRETDLVRDALQAIKPTVMCAVPRFYEKVFSAIHDKVSRAGTLKK---- 295
Query: 179 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 238
+ A + E F + R ++ + +A P H LA+KLV K
Sbjct: 296 -----RLFHWAVGQGKEKFLIERRGERYPFWLA---------------PAHFLADKLVLK 335
Query: 239 KIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 297
K++ +G + + + G SL ++ LF+E++G+K++ GYGLTE+ + GS
Sbjct: 336 KLRDLLGGNLRFLPAAGASLDDNVILFFESLGLKIKYGYGLTETCATVTCWEENDFRFGS 395
Query: 298 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 357
VG + E++I E NE ++VRG +++GYF P T + DGW TG
Sbjct: 396 VGTALPEIEVRI--GEENE---------IQVRGPTLLRGYFNKPEETAASFTADGWFKTG 444
Query: 358 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 417
D G + G V + E R KD + S G+ + P +E ++ I Q VI
Sbjct: 445 DAGKMDAQ---------GNVFITE-RLKDLMKTSGGKYIAPQRIEGTLVQDRYIEQAAVI 494
Query: 418 GQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK-EKTISLLYGELRKWTSKCS--F 474
++ A+IVPD + + + A+ I + + + L K E+ +SL +LR+ +
Sbjct: 495 ADERHFVSALIVPDFDVLNVYAQAHRIDYFNRAGLVKNEQILSLFAHQLREIQHDLAGFE 554
Query: 475 QIGPIHVVDEPFTV 488
Q+ ++ +PFT+
Sbjct: 555 QVKKFVLLTKPFTM 568
>gi|114565123|ref|YP_752637.1| AMP-dependent synthetase and ligase [Shewanella frigidimarina NCIMB
400]
gi|114336416|gb|ABI73798.1| AMP-dependent synthetase and ligase [Shewanella frigidimarina NCIMB
400]
Length = 597
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 127/407 (31%), Positives = 192/407 (47%), Gaps = 58/407 (14%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 118
DD+ T +YTSGTTGNPKGVML ++N I+ +P GD L+ LP HV+ER
Sbjct: 179 DDLFTLIYTSGTTGNPKGVMLDYRNFASMIKQHDSELPFTAGDVSLAFLPLSHVFERGWS 238
Query: 119 YFIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 177
++ RG +Y N +K+ L +PH + +VP E +YS + ++ + R+ +
Sbjct: 239 MYVLCRGGHNVYLNDTNRIKEALIAVKPHTLCAVPRFLEKIYSAVHDKVGQAPKVRQTLF 298
Query: 178 RALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVY 237
+R+ KR +E +++ + S WL A+ W LA KLVY
Sbjct: 299 AWAMRVG------KRQFE---VSQGRASGSL------WLSAQ------WK---LANKLVY 334
Query: 238 KKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVL- 295
K+Q +G K GG +L +++ F+ +IGV V GYG+TE+ + TCN L
Sbjct: 335 SKLQQVLGGRLKFMPVGGAALDINVASFFHSIGVPVLCGYGMTETCATV-----TCNTLD 389
Query: 296 ----GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDED 351
GS G P+ +IK+ + +E+L VRG VM+GY+ P T A ED
Sbjct: 390 NRVPGSNGKPLEAMQIKL--GKDDEIL---------VRGDTVMRGYYNRPQDTADAF-ED 437
Query: 352 GWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLI 411
GWL TGD G I G L + R K+ + S G+ + P +E I
Sbjct: 438 GWLKTGDAGRIDEQ----------GNLYITDRIKELMKTSNGKYIAPQRVEGKVACCPFI 487
Query: 412 RQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTI 458
Q+ ++ + A+IVP E + AK I + EL + +
Sbjct: 488 EQVAIVADARNYVSALIVPAFEALNTWAKAQGIHVENPIELLRHSQV 534
>gi|167753742|ref|ZP_02425869.1| hypothetical protein ALIPUT_02023 [Alistipes putredinis DSM 17216]
gi|167658367|gb|EDS02497.1| AMP-binding enzyme [Alistipes putredinis DSM 17216]
Length = 634
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 133/456 (29%), Positives = 218/456 (47%), Gaps = 63/456 (13%)
Query: 54 ETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVY 113
+ I +DD AT YTSGTT +PKGV+LTH+N + + + + L +LP H +
Sbjct: 170 QAIRNDDYATITYTSGTTADPKGVVLTHRNYTANVEQSLSRIDIPSSYRTLIILPLDHCF 229
Query: 114 ERACGYFIF----------SRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQ 163
G++I G M T ++N+ +++ +P++++SVP L +
Sbjct: 230 AHVVGFYIMIACGASVATVQIGATPMET-LKNIPQNIREVKPNFLLSVP----ALAKNFR 284
Query: 164 KQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICA 223
K I TS A+ L + TA+ +G+ + W RI+ A
Sbjct: 285 KNIETSIRAKGPFTERLFDFALR-TAYIYNQDGYHKGKG------------W---RILLA 328
Query: 224 ILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGS-LPMHIDLFYEAIGVKVQVGYGLTESS 282
P+ L + ++++K++ A G S GGG+ L + F+ AIG+ + GYGL+E++
Sbjct: 329 ---PVVGLFDLVLFRKVREAFGGSLEFFVGGGALLDSELQRFFYAIGIPMFQGYGLSEAT 385
Query: 283 PVIAARRPTC--NVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKN 340
PVI+ P + GS G + ++KI+D E E LP G KG + +RG VM GY+KN
Sbjct: 386 PVISTNSPKYHWHKFGSSGKILEPLDLKILDEEGRE-LPRGQKGEIVIRGENVMAGYWKN 444
Query: 341 PSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLE 400
P AT + +GWL+TGD+G+++ L + GR K ++ S GE P
Sbjct: 445 PDATAATV-RNGWLHTGDMGYVSEDD----------FLYVLGRFKSLLIASDGEKYSPEG 493
Query: 401 LEEAAL-RSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTIS 459
+EEA + +S I QI++ GAI+VP+++ A R + D E
Sbjct: 494 MEEAIVDKSPFIDQIIIYNNQSPFTGAIVVPNRD-----ALRRELDARDIREGRAAAAAD 548
Query: 460 LLYGELRKWTSKCSFQ--------IGPIHVVDEPFT 487
+L E+ ++ + + + +VDEPFT
Sbjct: 549 ILGAEIDRYRAGGPYAGEFPERWLPAGLAIVDEPFT 584
>gi|68535669|ref|YP_250374.1| acyl-CoA synthetase [Corynebacterium jeikeium K411]
gi|68263268|emb|CAI36756.1| acyl-CoA synthetase [Corynebacterium jeikeium K411]
Length = 612
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 114/380 (30%), Positives = 183/380 (48%), Gaps = 50/380 (13%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIV---PAENGDKFLSMLPPWHVYER 115
DD+A+ VYTSGTTG PKG LTH N L + R++ A G + L+ LP HV+ R
Sbjct: 188 DDVASIVYTSGTTGRPKGCKLTHHNWLAEARAILTHPVGRAAAFGYRKLTFLPLAHVFSR 247
Query: 116 ACGYFIFSRG-IELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARR 174
A + G + ++ + L + QR +P+ + SVP ++E +++G++ + +
Sbjct: 248 AMAHAATVGGATQTHWSDMSTLVAEFQRTKPNLICSVPRIFEKVHAGVKSKATDGGGVKA 307
Query: 175 VVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEK 234
+ R + Y+ EG L + ID + +K
Sbjct: 308 KIFNFAERAAVDYSKALDTDEGPSLKQK----------ID--------------RAIGDK 343
Query: 235 LVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCN 293
LVY K++ A+G +SGG +L + F+ +GV + GYGLTE + N
Sbjct: 344 LVYSKVREAMGGELDYAISGGSALNPELMHFFRGVGVNLYEGYGLTECTAAACTNFAPDN 403
Query: 294 VLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGW 353
++G+VG P+ +KI D G + ++G V GY++N AT ++ EDG+
Sbjct: 404 IIGTVGRPLGGITVKIAD-----------DGEILLKGDMVFAGYWENEEATAESFTEDGF 452
Query: 354 LNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQ 413
TGD+G + P G L + GR K+ IV + G+NV P +E+ + LI Q
Sbjct: 453 YRTGDLGKLLPT----------GHLKITGRKKEIIVTAGGKNVSPGPMEDILRSAPLISQ 502
Query: 414 IVVIGQDQRRPGAIIVPDKE 433
+V+G DQ+ GA+I D+E
Sbjct: 503 AMVVGDDQKFVGALISLDEE 522
>gi|311742143|ref|ZP_07715953.1| AMP-binding enzyme [Aeromicrobium marinum DSM 15272]
gi|311314636|gb|EFQ84543.1| AMP-binding enzyme [Aeromicrobium marinum DSM 15272]
Length = 614
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 127/449 (28%), Positives = 218/449 (48%), Gaps = 59/449 (13%)
Query: 24 VFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKN 83
+ S++E + LG + R S D R E + D+AT VYTSGTTG PKG MLT N
Sbjct: 148 LLSWEEFVALGEQHRSQHPGSLDER----LEAVEPSDLATLVYTSGTTGPPKGAMLTQAN 203
Query: 84 LLH-----QIRSLYDIVPAENGDKFLSMLPPWHVYERA-CGYFIFSRGIELMYT-AVRNL 136
+ Q +S + PA D LS LP HV ER +F + G ++ + ++ +
Sbjct: 204 ITFVLDTLQGQSAFVSPPANEKDLVLSYLPLCHVAERVFTTWFNAAVGTQVNFAESIDTV 263
Query: 137 KDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEG 196
+ +L+ QP + VP ++E + +G+Q ++ +S +R Y + ++
Sbjct: 264 QLNLREVQPTLVFGVPRIWEKIAAGVQVRMAGASRIKRA----------NYAVWMKVASW 313
Query: 197 FCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGS 256
T ++Q + V RI A+ W ++Y+ ++ IG++K + G+
Sbjct: 314 IGRTLVERQGKHTVG------TRIAYAVGW-------VMLYRPLRERIGLAKTRYAASGA 360
Query: 257 LPMHIDL--FYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAET 314
P+ ++ F+ +G+ + YG+TE+S + A +G+VG P E++I D ET
Sbjct: 361 APISPEVLEFFMGLGLPMFEVYGMTENSAIATANMAGRVRVGTVGEPQPGAEVRI-DEET 419
Query: 315 NEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIG-WIAPHHSRGRSRR 373
E+L R + GY+ NP AT +D DGWL+TGD+G W+ H
Sbjct: 420 GEIL---------TRHAGTFAGYWNNPEATASTIDADGWLHTGDVGTWVDGTH------- 463
Query: 374 CGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 433
L + R KD I+ + G+N+ P E+E + S +++ +VIG ++ A+I + +
Sbjct: 464 ----LKITDRIKDIIITAGGKNISPSEIENSLKASPFVKEALVIGDRRKYLTALIGIELD 519
Query: 434 EVLMAAKRLSIVHADASEL-SKEKTISLL 461
V A+R I + +L +K + I+L+
Sbjct: 520 TVGAWAQRRKIAYTTYRDLTTKPEVIALV 548
>gi|225021764|ref|ZP_03710956.1| hypothetical protein CORMATOL_01792 [Corynebacterium matruchotii
ATCC 33806]
gi|224945460|gb|EEG26669.1| hypothetical protein CORMATOL_01792 [Corynebacterium matruchotii
ATCC 33806]
Length = 610
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 127/409 (31%), Positives = 192/409 (46%), Gaps = 55/409 (13%)
Query: 30 IIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIR 89
I L E R D D R H S D+A+ VYTSGTTG PKG LTH N L ++
Sbjct: 163 IATLKFEGRPIDDDQVDGRIH----ATKSRDLASLVYTSGTTGRPKGCRLTHANWLSEVH 218
Query: 90 SLYDI---VPAENGDKFLSMLPPWHVYERACGYFI-FSRGIELMYTAVRNLKDDLQRYQP 145
L A G + L+ LP HV RA + G + ++ L + QR +P
Sbjct: 219 GLLTNPIGAIARPGSRVLTFLPLAHVLSRAVSLAVAIGGGTQSHWSNFSTLGVEFQRARP 278
Query: 146 HYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQ 205
+ ++ VP V+E +++ SA A +R + + A K E +
Sbjct: 279 NLILGVPRVFEKVHN---------SAVANATAGGPVRAALFHKARKVAIEYSRALDTSEG 329
Query: 206 PSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLF 264
PS ++ L H ++LVY KI++A+G S +SGG ++ I F
Sbjct: 330 PSRMLKL---------------QHKTYDRLVYSKIRAAMGNSVHYAISGGSAMSPEILHF 374
Query: 265 YEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKG 324
+ IG + GYGLTE++ A +G+VG PI ++I D +E+L
Sbjct: 375 FRGIGAPIYEGYGLTETTAA-ATVDFVDQKIGTVGPPIGGVSVRIND--DSEIL------ 425
Query: 325 IVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRA 384
++G+ V GY+ NP+AT ++ +DGW NTGD+G I G LV+ GR
Sbjct: 426 ---IKGTTVFDGYWNNPTATAESFTDDGWFNTGDLGEILE----------SGHLVITGRK 472
Query: 385 KDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 433
KD IV + G+NV P +E+A + LI Q +V+G + G ++ D++
Sbjct: 473 KDLIVTAGGKNVSPEPMEDALVAHPLISQAMVVGDGKPFIGLLVTLDED 521
>gi|392391090|ref|YP_006427693.1| AMP-forming long-chain acyl-CoA synthetase [Ornithobacterium
rhinotracheale DSM 15997]
gi|390522168|gb|AFL97899.1| AMP-forming long-chain acyl-CoA synthetase [Ornithobacterium
rhinotracheale DSM 15997]
Length = 595
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 127/409 (31%), Positives = 200/409 (48%), Gaps = 47/409 (11%)
Query: 52 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWH 111
++ I SDD AT +YTSGTTG PKGV+LTH N L I + + + D ++ LP H
Sbjct: 170 RFNEIDSDDTATLIYTSGTTGKPKGVILTHTNFLAAIENHKERYDLTDKDVSMAFLPLSH 229
Query: 112 VYERACGYFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSS 170
++ERA + S G+ +Y R++ D L +P M SVP +YE +Y Q I T S
Sbjct: 230 IFERAWSFLALSVGMTNIYNRDPRSIADMLLIAKPTAMCSVPRLYEKVY---QMAINTMS 286
Query: 171 AARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHL 230
++ V + +A K+ E RN K + + + D
Sbjct: 287 KSKAPVKKLFF---WALEIGKKREE---YVRNGKNLPFGLKIKDQ--------------- 325
Query: 231 LAEKLVYKKIQSAIGISKAGVSGGGS-LPMHIDLFYEAIGVKVQVGYGLTESSPVIAARR 289
+AE LVYKK + +G + + + GG+ + + F+ A+ + + VGYGL+E++ +++ +
Sbjct: 326 IAETLVYKKFREKLGGNLSFIPCGGAYVGDEVVEFFRAMRLPLIVGYGLSETTATVSSCQ 385
Query: 290 PTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALD 349
LGSVG PIN+ ++KI E NE+L V+G VM+GY+ P ++A
Sbjct: 386 INDYELGSVGKPINNVDVKI--GENNEIL---------VKGRTVMKGYYNRPEENEKAFT 434
Query: 350 EDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSS 409
+DGW TGD G G LV+ R K+ I + G+ + P +E +
Sbjct: 435 KDGWFKTGDAGRFDEK----------GNLVITDRIKELIKTAGGKYIAPQMVENVLTKDP 484
Query: 410 LIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTI 458
I Q VV G+ + A+I P+ + + AK +I + EL K K +
Sbjct: 485 EIAQAVVYGERKPYAVALITPNFDWLKNWAKEQNINFQNMVELIKNKKV 533
>gi|390949390|ref|YP_006413149.1| AMP-forming long-chain acyl-CoA synthetase [Thiocystis violascens
DSM 198]
gi|390425959|gb|AFL73024.1| AMP-forming long-chain acyl-CoA synthetase [Thiocystis violascens
DSM 198]
Length = 608
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 128/424 (30%), Positives = 197/424 (46%), Gaps = 52/424 (12%)
Query: 41 FSDSNDARKHYKYET----IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVP 96
FS D +H E D+AT VYTSGTTG PKGVML+H ++L + +V
Sbjct: 165 FSSVADFLRHETGEPPEHRAAPGDLATIVYTSGTTGRPKGVMLSHFSILWNAEAQLKMVL 224
Query: 97 AENGDKFLSMLPPWHVYERACG-YFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLV 154
++ D FLS LP H +ER G YF G + Y ++++L++DL +P +ISVP +
Sbjct: 225 TDHDDIFLSFLPLSHTFERTVGYYFPMMAGSCVAYARSLQDLREDLLTIRPTVLISVPRI 284
Query: 155 YETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALID 214
YE Y+ IQ+++ + + + + +A F + + P + +
Sbjct: 285 YERAYARIQEKLAEDGRLAQWLFSQAVELGWAR---------FLAGQGRGDPPGRLDRL- 334
Query: 215 WLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQ 273
L L LV K+ + +G + +SG L + + +G+ +
Sbjct: 335 -------------LWRLLRPLVADKVLARLGGRLRIAISGAAPLRAEVARCFIGLGLNLL 381
Query: 274 VGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQV 333
GYGLTES+P IA NV GS G PI EI+I D G + RG V
Sbjct: 382 EGYGLTESAPTIAGNPAEDNVPGSAGVPIPGMEIRIAD-----------NGELLARGPSV 430
Query: 334 MQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTG 393
M GY+K P T+ ++ DGWL+TGD+ + H L + GR KD +V+STG
Sbjct: 431 MLGYWKRPEETRTMIEPDGWLHTGDLAEMRDGH-----------LFIRGRLKDILVMSTG 479
Query: 394 ENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELS 453
E V +LE L Q +V+G+ + A++V +++ A LS+ D L
Sbjct: 480 EKVPAGDLERTILEDPWFEQALVLGEGRPFVAALLVLERQAWSALAASLSLDADDEGSLG 539
Query: 454 KEKT 457
++
Sbjct: 540 DKRA 543
>gi|311742829|ref|ZP_07716637.1| long-chain-fatty-acid--CoA ligase [Aeromicrobium marinum DSM 15272]
gi|311313509|gb|EFQ83418.1| long-chain-fatty-acid--CoA ligase [Aeromicrobium marinum DSM 15272]
Length = 584
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 119/411 (28%), Positives = 186/411 (45%), Gaps = 56/411 (13%)
Query: 28 DEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQ 87
D + L R D +AR+ + ++ AT VYTSGTTG PKG +LTH NL +
Sbjct: 151 DAVAALVAAGRDVSDDDLEARR----AAVTAESPATIVYTSGTTGRPKGCVLTHGNLRAE 206
Query: 88 IRSLYDIVP---AENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRY 143
+ +I+P ++ L LP HV+ R G L +TA V +L L +
Sbjct: 207 LAGALEILPDLFGQDDATTLLFLPLAHVFARIIQVGAIRSGATLGHTADVGDLVGHLGEF 266
Query: 144 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQ 203
+P ++++VP V+E +++ + + A I+++ G L
Sbjct: 267 RPTFVLAVPRVFEKVFNSASAKAWADGRGPVFDRAAATAIAYSRAQVDGGRPGVALRAR- 325
Query: 204 KQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKA-GVSGGGSLPMHID 262
H + ++LVY +I+ A+G A +SGG L +
Sbjct: 326 -------------------------HRVFDRLVYGRIRDALGGRAAWAISGGAPLGERLA 360
Query: 263 LFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGS 322
FY IGV V GYGLTE++ + P +G+VG P TE ++ D
Sbjct: 361 HFYRGIGVTVLEGYGLTETTAALCVNTPDDQRIGTVGRPFPRTEARVAD----------- 409
Query: 323 KGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEG 382
G ++ RG QV GY+ +P AT Q LDE GW +TGD+G I G + + G
Sbjct: 410 DGELQFRGPQVFSGYWNDPEATAQVLDEHGWFSTGDLGEIDDD----------GFVRITG 459
Query: 383 RAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 433
R K+ +V + G+NV P LE+ +++ Q VV+G + A++ D+E
Sbjct: 460 RKKEILVTAGGKNVAPAVLEDQVRAHAVVSQCVVVGDGKPFIAALVTVDRE 510
>gi|108759016|ref|YP_630755.1| long-chain-fatty-acid--CoA ligase [Myxococcus xanthus DK 1622]
gi|108462896|gb|ABF88081.1| putative long-chain-fatty-acid--CoA ligase [Myxococcus xanthus DK
1622]
Length = 604
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 124/435 (28%), Positives = 202/435 (46%), Gaps = 45/435 (10%)
Query: 60 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG- 118
D+A +YTSGTTG PKGVML+H N+ + +++++ P D+ L+ LP HV+ +
Sbjct: 170 DLAGLIYTSGTTGQPKGVMLSHANIARNVSAMHEVFPMGTEDRSLAFLPWAHVFGQTVEL 229
Query: 119 YFIFSRGIEL-MYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 177
+ + S G + + AV + D+L +P + SVP ++ +Y G+QK++ A + V
Sbjct: 230 HALLSMGASMAIAEAVEKIIDNLSEVKPTLLFSVPRIFNRIYDGLQKRM----AGEKAVT 285
Query: 178 RALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVY 237
R + A A +R L K +L H +K+V+
Sbjct: 286 RFMFHRGLAVAAQRR-----ALAEAGKS----------------SGLLDLQHAFFDKVVF 324
Query: 238 KKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLG 296
K+++ G K SGG ++ + F + +G+ V GYGLTE+SP+ A P +G
Sbjct: 325 SKVRARFGGRLKYAFSGGSAISKEVAEFIDNLGITVYEGYGLTETSPIATANFPNNRKIG 384
Query: 297 SVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNT 356
SVG + ++I A T E ++G + V G VM GY+ P ++ +G T
Sbjct: 385 SVGKALPGIRVEIDTAATGEA----TQGEIVVHGHNVMMGYYNKPEENEKVFTGNGGFRT 440
Query: 357 GDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVV 416
GD+G++ P G L + GR K+ L G+ V P +E++ S+ I +V
Sbjct: 441 GDMGYLDPD----------GYLYITGRIKEQYKLENGKYVVPSPIEQSLALSTYIANALV 490
Query: 417 IGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGE-LRKWTSKCSFQ 475
G ++ AIIV D + + A + EL K + LY E L ++T
Sbjct: 491 HGMNKPYNVAIIVVDVDTLKKWATEKGLDTTSMPELLKRPEVLQLYREQLNEFTRDVKGY 550
Query: 476 IGP--IHVVDEPFTV 488
P ++ E FTV
Sbjct: 551 ERPQRFLLISEDFTV 565
>gi|260578257|ref|ZP_05846173.1| long-chain-fatty-acid--CoA ligase [Corynebacterium jeikeium ATCC
43734]
gi|258603559|gb|EEW16820.1| long-chain-fatty-acid--CoA ligase [Corynebacterium jeikeium ATCC
43734]
Length = 618
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 117/388 (30%), Positives = 187/388 (48%), Gaps = 54/388 (13%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIV---PAENGDKFLSMLPPWHVYER 115
DD+A+ VYTSGTTG PKG LTH N L + R++ A G + L+ LP HV+ R
Sbjct: 194 DDVASIVYTSGTTGRPKGCKLTHHNWLAEARAILTHPVGRAAAFGYRKLTFLPLAHVFSR 253
Query: 116 ACGYFIFSRG-IELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARR 174
A + G + ++ + L + QR +P+ + SVP ++E +++G++ + +
Sbjct: 254 AMAHAATVGGATQTHWSDMSTLVAEFQRTKPNLICSVPRIFEKVHAGVKAKATDGGGVKA 313
Query: 175 VVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEK 234
+ R + Y+ EG L + ID + +K
Sbjct: 314 KIFNFAERAAVDYSKALDTDEGPSLKQK----------ID--------------RAIGDK 349
Query: 235 LVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCN 293
LVY K++ A+G +SGG +L + F+ +GV + GYGLTE + N
Sbjct: 350 LVYSKVREAMGGELDYAISGGSALNPELMHFFRGVGVNLYEGYGLTECTAAACTNFAPDN 409
Query: 294 VLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGW 353
++G+VG P+ +KI D G + ++G V GY++N AT ++ EDG+
Sbjct: 410 IIGTVGRPLGGITVKIAD-----------DGEILLKGDMVFAGYWENEEATAESFTEDGF 458
Query: 354 LNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQ 413
TGD+G + P G L + GR K+ IV + G+NV P +E+ + LI Q
Sbjct: 459 YRTGDLGKLLPT----------GHLKITGRKKEIIVTAGGKNVSPGPMEDILRSAPLISQ 508
Query: 414 IVVIGQDQRRPGAIIVPDKEEVLMAAKR 441
+V+G DQ+ GA+I D+E AAK+
Sbjct: 509 AMVVGDDQKFVGALISLDEE----AAKK 532
>gi|359424890|ref|ZP_09215996.1| long-chain fatty-acid--CoA ligase [Gordonia amarae NBRC 15530]
gi|358239792|dbj|GAB05578.1| long-chain fatty-acid--CoA ligase [Gordonia amarae NBRC 15530]
Length = 601
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 116/397 (29%), Positives = 186/397 (46%), Gaps = 54/397 (13%)
Query: 42 SDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAEN-- 99
+D +D + T+ +D + +YTSGTTG PKG +LTH NLL + R+ E
Sbjct: 164 ADVSDDEVAARRATVRADSPSVLIYTSGTTGRPKGCVLTHSNLLSECRAALSTGIGEKLE 223
Query: 100 -GDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYET 157
G + L LP HV A G + +T+ ++NL + ++P ++SVP V+E
Sbjct: 224 PGKRLLMFLPLAHVLAHAITLVAIDGGAAVGFTSDIKNLVPEFGNFRPSAILSVPRVFEK 283
Query: 158 LYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLW 217
+++ ++ + A I+F+ Q + LV
Sbjct: 284 VFNTARQGAHDGGKGKIFDLAADTAIAFS-------------DAQQNGGASLV------- 323
Query: 218 ARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGY 276
L H + +KLVY K+++A+G + +SGG L + F+ +G+ V GY
Sbjct: 324 -------LKLKHTVFDKLVYSKLRTALGGQCEMAISGGAPLGARLGHFFSGVGIPVYEGY 376
Query: 277 GLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQG 336
GLTE++ + P +G+VG P+ +I D G + + G V G
Sbjct: 377 GLTETTAAFSVNTPGATKIGTVGRPLPGNSARIAD-----------DGEIMLHGGVVFDG 425
Query: 337 YFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENV 396
Y+ NP+AT+ A+ EDGW +TGDIG I G L + GR K+ IV + G+NV
Sbjct: 426 YWNNPTATEAAV-EDGWFHTGDIGTIDDE----------GFLKITGRKKELIVTAGGKNV 474
Query: 397 EPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 433
P LE+ S+L+ Q +V+G+ + GA++ D E
Sbjct: 475 SPSGLEDVIRASALVSQALVVGEAKPFVGALVTIDAE 511
>gi|224536543|ref|ZP_03677082.1| hypothetical protein BACCELL_01418 [Bacteroides cellulosilyticus
DSM 14838]
gi|224521799|gb|EEF90904.1| hypothetical protein BACCELL_01418 [Bacteroides cellulosilyticus
DSM 14838]
Length = 604
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 131/441 (29%), Positives = 211/441 (47%), Gaps = 58/441 (13%)
Query: 58 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSM--LPPWHVYER 115
DD+A +YTSGTTG PKGVML H N + R ++DI + D+ +SM LP HV+E+
Sbjct: 182 DDDLANILYTSGTTGEPKGVMLHHSNYMEAFR-IHDIRLVDMSDQDVSMNFLPLTHVFEK 240
Query: 116 ACGYFIFSRGIELMYTAVR--NLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 173
A Y +G+++ +R +++ ++ +P M SVP +E +Y+G+Q++I + +
Sbjct: 241 AWTYLCIHKGVQICIN-LRPVDIQTTIKEIRPTLMCSVPRFWEKVYAGVQEKIAQETGLK 299
Query: 174 RVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAE 233
+ + I++ +I+ L + + P L++ L + E
Sbjct: 300 KAMMLDAIKVG-------KIHNIDYLRKGKTPP-----LMNQLKYK-----------FYE 336
Query: 234 KLVYKKIQSAIGISKAGV--SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPT 291
K VY ++ IGI + G ++P I F ++G+ + VGYGLTES+ ++
Sbjct: 337 KTVYALLKKTIGIENGNFFPTAGAAVPDEICEFVHSVGINMLVGYGLTESTATVSCFLNQ 396
Query: 292 CNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDED 351
+GSVG + E+KI D NE+L +RG + +GY+K AT A+D+D
Sbjct: 397 GYEIGSVGTVMPDVEVKIGDE--NEIL---------LRGKTITKGYYKKAEATAAAIDKD 445
Query: 352 GWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLI 411
GW +TGD G++ G L L R KD S G+ V P LE I
Sbjct: 446 GWFHTGDAGYLK-----------GDQLYLTERIKDLFKTSNGKYVSPQALETKLAIDRYI 494
Query: 412 RQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSK 471
QI +I ++ A+IVP V AK I + + EL + I L+ R T +
Sbjct: 495 DQIAIIADQRKFVSALIVPVYGFVKDYAKEKGIEYKNMEELLQHPKILGLF-RARIDTLQ 553
Query: 472 CSF----QIGPIHVVDEPFTV 488
F Q+ ++ EPF++
Sbjct: 554 QQFAHYEQVKRFTLLPEPFSM 574
>gi|423204014|ref|ZP_17190570.1| hypothetical protein HMPREF1168_00205 [Aeromonas veronii AMC34]
gi|404628008|gb|EKB24796.1| hypothetical protein HMPREF1168_00205 [Aeromonas veronii AMC34]
Length = 596
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 124/430 (28%), Positives = 205/430 (47%), Gaps = 55/430 (12%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 118
DD+ T +YTSGTTG PKGVML N+ + D L MLP HV+ERA
Sbjct: 176 DDLLTLIYTSGTTGEPKGVMLDFSNIAACFEMHNSRLDLNEQDVSLCMLPLSHVFERAWS 235
Query: 119 YFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 177
Y++ G E +Y + + D + QP M +VP +YE Y+ IQ ++ + A RR +
Sbjct: 236 YYVLYCGAENVYIRDPQKVMDVIGEVQPTVMCAVPRLYEKAYAMIQAKVAQAPALRRAL- 294
Query: 178 RALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVY 237
F + ++ + TR + + + ++ + LW LAE+LV+
Sbjct: 295 -------FGWAT--KVGKQMIATRQAGKTA----------SPLLYSQLW----LAERLVF 331
Query: 238 KKIQSAIG-ISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLG 296
+K+++ G ++ G L ++LF++A+G+ ++ GYG+TE++ + + LG
Sbjct: 332 RKLRARFGGRTRFLPVAGARLADDVNLFFQAMGLNLKYGYGMTETTATVCCYEDSQFKLG 391
Query: 297 SVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNT 356
S+G +N E+K+ E NE+L VR VM+GY+ P AT + + EDG+L T
Sbjct: 392 SIGTALNGIEVKL--GENNELL---------VRSPTVMRGYYNKPDATAEVMTEDGFLRT 440
Query: 357 GDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVV 416
GD G + C G + R K+ + S G+ V P +E + I QI +
Sbjct: 441 GDAGELD----------CQGNIYFTERLKELMKTSNGKYVAPQLVEGTIGKDRFIEQIAI 490
Query: 417 IGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLLYGELRKW 468
+ + A+IVP E + A+ +++ + +EL + E I+ L EL K+
Sbjct: 491 VADARHFVSALIVPCFESLEEYARSINLQYQCKTELLRHSRVMEFFEARIADLQKELAKF 550
Query: 469 TSKCSFQIGP 478
F + P
Sbjct: 551 EQVKKFTLLP 560
>gi|226939644|ref|YP_002794717.1| long chain fatty-acid CoA ligase [Laribacter hongkongensis HLHK9]
gi|226714570|gb|ACO73708.1| Probable long chain fatty-acid CoA ligase [Laribacter hongkongensis
HLHK9]
Length = 588
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 138/478 (28%), Positives = 232/478 (48%), Gaps = 61/478 (12%)
Query: 23 PVFSYDEIIDLG--RESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLT 80
PV++++ + E A D N +++ DD+ T +YTSGTTG PKGVML+
Sbjct: 130 PVYTFENVEGAANWEELLMAGGDGNPEVLAALRDSVRPDDLLTIIYTSGTTGRPKGVMLS 189
Query: 81 HKNLLHQIRSLYDIV-PAENGD-KFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN-LK 137
H+N++ Q+ ++ V P G + +S LP HV+ER YF S G+ + Y + +
Sbjct: 190 HRNVVSQVEAVCRFVKPLVPGQWRTVSFLPLSHVFERTACYFYISAGVSIYYAKSMDVIA 249
Query: 138 DDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGF 197
LQ P +VP + E +Y ++ + S + V R L Y A R E F
Sbjct: 250 ASLQDVHPQMFTTVPRLLEKVY----EKFVSKSHELKGVTRKL------YEAALRFAESF 299
Query: 198 CLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGS 256
P L AL + L +KLVY K ++A+G + V G +
Sbjct: 300 ---EPNTPPKGLAAL---------------QYKLYDKLVYSKWRAAMGNEVQVIVVGSAA 341
Query: 257 LPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNV--LGSVGHPINHTEIKIVDAET 314
L + + A G+ V GYG+TES+PV+ + + +G+VG P+++ EI+I AE
Sbjct: 342 LQPRLARVFWAAGIMVTEGYGMTESAPVLTGNQLDADQVDIGTVGIPLDNVEIRI--AED 399
Query: 315 NEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRC 374
E+L RG VM GY+K+ T++ L +DGWL+TGD+G I ++RG R
Sbjct: 400 GEIL---------ARGPNVMMGYYKDEEMTRETL-KDGWLHTGDVGEI---NARGNLR-- 444
Query: 375 GGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEE 434
+ R K+ S G+ V P +E S+ I Q++V+G ++ A++VP ++
Sbjct: 445 -----ITDRKKEMFKTSCGKYVAPQVIENKLKESAYIDQVMVVGDGRKYASALVVPLFDQ 499
Query: 435 VLMAAKRLSI-VHADASELSKEKTISLLYGELRKWTSKCSF--QIGPIHVVDEPFTVN 489
V + + + ++A S K L+ E++++ Q+ + +V+ P++++
Sbjct: 500 VRAWCSQQGLQIKSEAEMASHPKVRELIEHEVKRFNRLFGSWEQVKKVALVERPWSID 557
>gi|336325229|ref|YP_004605195.1| acyl-CoA synthetase [Corynebacterium resistens DSM 45100]
gi|336101211|gb|AEI09031.1| acyl-CoA synthetase [Corynebacterium resistens DSM 45100]
Length = 610
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 113/383 (29%), Positives = 190/383 (49%), Gaps = 50/383 (13%)
Query: 58 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGD---KFLSMLPPWHVYE 114
+ D+ + VYTSGTTG PKG L H N L + R++ + G + L+ LP HV+
Sbjct: 185 TTDVCSIVYTSGTTGRPKGCRLLHSNWLGEARAILTHPVGQCGHPGYRVLTFLPLAHVFA 244
Query: 115 RACGYFIFSRG-IELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 173
RA G ++ ++ + +L +R +P+ +++VP ++E +++G + + +
Sbjct: 245 RAISLACVVGGATQIHWSDMGSLVTQFERSKPNLIVAVPRIFEKVHAGAKAKAVDGGGLK 304
Query: 174 RVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAE 233
A+ ++ + R + N + PS A L + +
Sbjct: 305 ---AKIFLQAEKVAVEYSRALD------NPEGPS---------------AALKAQRAVFD 340
Query: 234 KLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTC 292
KLVY K++ A+G + +SGG + + F+ IGV++ GYGLTES+ IA
Sbjct: 341 KLVYSKVREAMGGKLEYAISGGSACNPELLHFFRGIGVRIFEGYGLTESTAAIAVNFDPD 400
Query: 293 NVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDG 352
N++G+VG P+ I+I D G + ++G+ V GY++N ATK++ EDG
Sbjct: 401 NIIGTVGRPMGGNTIRIDD-----------DGEITIKGTVVFDGYWRNEEATKESFTEDG 449
Query: 353 WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIR 412
+ TGD+G + P G L + GR K+ IV + G+NV P +E+ + LI
Sbjct: 450 FYRTGDLGRLLPS----------GHLKITGRKKEIIVTAGGKNVSPGPMEDILRSAPLIS 499
Query: 413 QIVVIGQDQRRPGAIIVPDKEEV 435
Q +V+G DQ+ GA+I D+E V
Sbjct: 500 QAMVVGDDQKFVGALISLDEEAV 522
>gi|404259764|ref|ZP_10963070.1| putative fatty-acid--CoA ligase [Gordonia namibiensis NBRC 108229]
gi|403401736|dbj|GAC01480.1| putative fatty-acid--CoA ligase [Gordonia namibiensis NBRC 108229]
Length = 612
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 121/411 (29%), Positives = 205/411 (49%), Gaps = 49/411 (11%)
Query: 53 YETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHV 112
++ + +D+AT +YTSGTTG PKGV +TH+N++ ++ +L + + D+ +S LP H+
Sbjct: 172 WQAVEPEDLATLIYTSGTTGPPKGVEITHRNIVAEMAALAEKLEVGFDDRAISYLPAAHI 231
Query: 113 YERACGYFI-FSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSS 170
+R + RGI++ R + L P + VP V++ + +GI+ ++ S
Sbjct: 232 ADRVSSHAANMMRGIQITTVPDPREIAAALPDVHPTFFFGVPRVWQKIRAGIEAKLAEES 291
Query: 171 AARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHL 230
+ V +AL +F A + A ID ++ + H
Sbjct: 292 SP---VKKALAGWAFGVGA-----------------ANAQARIDGKGTGLLGGVQ---HG 328
Query: 231 LAEKLVYKKIQSAIGISKAGVSGGGS--LPMHIDLFYEAIGVKVQVGYGLTESSPVIAAR 288
LA+KLV K+++A+G+ + +G G+ +P + F+ +G+ V +G++E++ V
Sbjct: 329 LADKLVLHKVRAALGLDEVSFAGSGAAAIPPEVLKFFLGLGIPVLEVWGMSETTGVSTMT 388
Query: 289 RPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQAL 348
P +G+VG P+ E+K+ + G + VRG VM+GY K P T + +
Sbjct: 389 TPDNLRVGTVGSPVRGMEVKLA-----------ADGELLVRGPVVMRGYRKQPEKTAETI 437
Query: 349 DEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEA-ALR 407
D +GWL+TGDI I G V +++ R K+ I+ +G+N+ P +E A
Sbjct: 438 DAEGWLSTGDIATI---------DDDGNVTIVD-RKKELIINESGKNMSPTNIENAMKAA 487
Query: 408 SSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTI 458
SSLI Q+V IG + A++V D E V M A +L + AD ELS I
Sbjct: 488 SSLISQVVAIGDAKPYVSALVVLDPEAVAMRANKLDMPGADLVELSAHPEI 538
>gi|410895205|ref|XP_003961090.1| PREDICTED: long-chain-fatty-acid--CoA ligase 5-like isoform 2
[Takifugu rubripes]
Length = 689
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 132/451 (29%), Positives = 207/451 (45%), Gaps = 68/451 (15%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQ-----------IRSLYDIVPAENGDKFLSML 107
DD++ +TSGTTGNPKG MLTH+N++ + + IVP+ D +S L
Sbjct: 254 DDLSIICFTSGTTGNPKGAMLTHENVVSDAAGVLKGFETCVLTQTTIVPSTE-DVTISFL 312
Query: 108 PPWHVYERACGYFIFSRG--IELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQ 165
P H++ER I+ G + +R L DD++ QP VP + +Y +Q
Sbjct: 313 PLAHMFERVVQTVIYGAGGRVGFFQGDIRLLPDDMKTLQPTIFPVVPRLLNRVYDKVQ-- 370
Query: 166 IFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAIL 225
S A + FK+ F + R + + + LW
Sbjct: 371 ------------------SGAKSPFKKWLLNFAVDRKYAEVKEGIVRNNSLW-------- 404
Query: 226 WPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAI-GVKVQVGYGLTESSP 283
+KL++ K+Q+++G + V+G + ++ F A+ G ++ GYG TE +
Sbjct: 405 -------DKLIFNKVQASLGGRVRVMVTGAAPISPNVLTFLRAVLGCQIFEGYGQTECTA 457
Query: 284 VIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSA 343
P G VG P+ +K+VD E + +G V ++G V +GY K+P
Sbjct: 458 GCTFTMPGDATAGHVGAPLPCNIVKLVDVEEMNYFASNGEGEVCIKGKNVFKGYLKDPEK 517
Query: 344 TKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEE 403
T +ALD+DGWL+TGDIG P GVL + R K+ L+ GE + P ++E
Sbjct: 518 TAEALDDDGWLHTGDIGKWLPS----------GVLKIIDRKKNIFKLAQGEYIAPEKIEN 567
Query: 404 AALRSSLIRQIVVIGQD-QRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK----EKTI 458
+RS L+ Q+ V G Q A+++PD E++ AK+L V EL K +K I
Sbjct: 568 VYVRSGLVAQVFVHGDSLQSCLVAVVIPDPEDLPSFAKKLG-VQGSLKELCKNTEIKKAI 626
Query: 459 SLLYGELRKWTSKCSF-QIGPIHVVDEPFTV 488
+L K SF Q+ I++ E FT+
Sbjct: 627 LSDMTKLGKEAGLKSFEQVKDIYLHPEQFTI 657
>gi|343508946|ref|ZP_08746243.1| putative long-chain-fatty-acid-CoA ligase [Vibrio scophthalmi LMG
19158]
gi|342806012|gb|EGU41253.1| putative long-chain-fatty-acid-CoA ligase [Vibrio scophthalmi LMG
19158]
Length = 602
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 127/424 (29%), Positives = 200/424 (47%), Gaps = 55/424 (12%)
Query: 65 VYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSR 124
+YTSGTTG PKGVML + N+ Q++ + + D L LP HV+ERA +++ R
Sbjct: 184 IYTSGTTGQPKGVMLDYANIGAQLQGHDQRLSLTDQDVSLCFLPLSHVFERAWTFYVLYR 243
Query: 125 GIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRI 183
G Y ++D L +P M +VP YE ++S I +++ + R+V+
Sbjct: 244 GATNCYLQDTMQVRDALSEIRPTVMSAVPRFYEKIFSAIHEKVAKAPFIRKVL------- 296
Query: 184 SFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSA 243
F + C ++ ++PS + L + LA+KLV K+++
Sbjct: 297 -FTWAVNMGAKMAVC-HQDGRKPSLM---------------LKKSYKLADKLVLSKLRAL 339
Query: 244 IGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPI 302
+G + GG L I F+ AIG+ V++GYG+TE++ ++ C S+G +
Sbjct: 340 LGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTATVSCWDDKCFDPASIGMSM 399
Query: 303 NHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWI 362
++KI E NE+L VRG VM+GY+K P T Q DE G+L TGD G I
Sbjct: 400 PGAQVKI--GENNEIL---------VRGPMVMRGYYKMPEETAQTFDEHGFLKTGDAGHI 448
Query: 363 APHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQR 422
+ G L + R K+ + S G+ + P +E A + I QI VI ++
Sbjct: 449 DEN----------GNLFITDRIKELMKTSNGKYIAPQVVEGAIGKDHFIEQIAVIADTRK 498
Query: 423 RPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLLYGELRKWTSKCSF 474
A+IVP + + AK L+I + D EL K E ++ L EL K+ F
Sbjct: 499 FVSALIVPCFDSLEEYAKELNIKYHDRVELIKHHQIVEMLESRVNDLQKELAKFEQVKKF 558
Query: 475 QIGP 478
++ P
Sbjct: 559 KLLP 562
>gi|409198272|ref|ZP_11226935.1| long-chain-fatty-acid-CoA ligase [Marinilabilia salmonicolor JCM
21150]
Length = 636
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 122/410 (29%), Positives = 200/410 (48%), Gaps = 54/410 (13%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 118
+DIA YTSGTT PKG+ML+H+N + + + + L +LP H +
Sbjct: 175 NDIANISYTSGTTAQPKGIMLSHRNYTANVEQAFSFIDIPAHFRTLVVLPWDHAFAHTAA 234
Query: 119 YFIFS-RGIEL--------MYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTS 169
+ F +G + ++N +++ QPH ++SVP + + I+K I
Sbjct: 235 LYAFMYKGASIASVETGRNQIETLKNFSNNIMEIQPHVLMSVPAMAKNFRKNIEKGI--- 291
Query: 170 SAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLH 229
A++ V L + Y+ + Y G + N K + + I PL+
Sbjct: 292 -ASKGKVVSGLFNFAMNYSIW---YNG---SGNDK-------------GKGLKKITAPLY 331
Query: 230 LLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDL--FYEAIGVKVQVGYGLTESSPVIAA 287
L ++++++ I+ G + GGG+L + IDL F+ A+G + GYGL+E++P+I+A
Sbjct: 332 KLFDRILFQTIRVRFGGNLQFFIGGGAL-LDIDLQRFFYALGTPMYQGYGLSEAAPIISA 390
Query: 288 RRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQA 347
P + LGS G + + E+KI D++ N LPAG+ G + V+G VM GY+KN AT +
Sbjct: 391 NTPDHHKLGSSGPIVQNLEVKICDSDGN-TLPAGTSGEIVVKGENVMLGYWKNQEATNET 449
Query: 348 LDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAAL- 406
+ DGWL TGD+G++ G L + GR K ++ S GE P +EEA +
Sbjct: 450 II-DGWLFTGDLGYLDNQ----------GYLYVLGRFKSLLIGSDGEKYSPEGIEEAIID 498
Query: 407 RSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEK 456
L+ Q V+ +IVP E+V +K L E+S+E+
Sbjct: 499 HCPLVDQFVLHNNQNPYTIGLIVPSSEKVNQLSKEL------GDEMSQEE 542
>gi|326771850|ref|ZP_08231135.1| long-chain-fatty-acid-CoA ligase [Actinomyces viscosus C505]
gi|326637983|gb|EGE38884.1| long-chain-fatty-acid-CoA ligase [Actinomyces viscosus C505]
Length = 630
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 124/406 (30%), Positives = 193/406 (47%), Gaps = 54/406 (13%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLL----HQIRSLYDIVPAENGDKFLSMLPPWHVYE 114
DD+ + +YTSGTTG PKGV LTH+N + H +R L ++ N + L LP HVY
Sbjct: 203 DDVYSIIYTSGTTGRPKGVELTHRNAVGIPYHGVRYLPGVLWGTN-VRLLLFLPLAHVYA 261
Query: 115 RACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 173
R + L +T + L DLQ + P Y+++VP V E +Y+ + S A+
Sbjct: 262 RCLQLLSLAGEGVLGHTPDAKTLLPDLQSFAPSYILAVPRVLEKIYNAADAK--AGSGAK 319
Query: 174 RVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAE 233
+ R +++ AY+ +G +R ++ H +A+
Sbjct: 320 LKLFRWAAKVAIAYSRALDTPQG--PSRGLRR----------------------AHAMAD 355
Query: 234 KLVYKKIQSAIGI-SKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTC 292
+LV++KI+ +G ++ +SGGG L + FY +G+ + GYGLTE+ ++
Sbjct: 356 RLVFRKIRGLMGPNARFIISGGGPLGQRLGHFYRGLGLAILEGYGLTETIGPVSVNTDWL 415
Query: 293 NVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDG 352
N +G+VG P+ EI+I + E ++VRG V Y NPSAT +A DG
Sbjct: 416 NKIGTVGPPVCGNEIRIGEDEE-----------IQVRGIGVFSTYHNNPSATAEAFTADG 464
Query: 353 WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIR 412
W TGDIG + G L + GR K+ IV + G+NV P +LE+ LI
Sbjct: 465 WFRTGDIGALDED----------GYLRITGRKKELIVTAGGKNVAPAQLEDRLRGHPLIS 514
Query: 413 QIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTI 458
Q++VIG + A+I DKE + + + D E S +
Sbjct: 515 QVLVIGDGEPFISALITLDKEMLPQWLRNHGLAAMDVVEASSHPQV 560
>gi|345315431|ref|XP_003429626.1| PREDICTED: long-chain-fatty-acid--CoA ligase 1 [Ornithorhynchus
anatinus]
Length = 674
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 136/471 (28%), Positives = 212/471 (45%), Gaps = 65/471 (13%)
Query: 5 ILLWGKKSSVAPDIVEEIPVFSYD-EIIDLGRE------SRKAFSDSNDARKHYKYETIG 57
+LL G + + P + + + S+D +I++ G++ S K+F A + K
Sbjct: 184 MLLDGVEKKLTPVLKTVVLMDSFDIDIVERGKKCGVNIISMKSFESLGRANRQ-KPRPPA 242
Query: 58 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLY----DIVPAENGDKFLSMLPPWHVY 113
DD+A +TSGTTGNPKG M+THKN++ + ++ + D +S LP H++
Sbjct: 243 PDDLAVICFTSGTTGNPKGAMITHKNIVSDCSAFVMMTESVLLPDRDDILISFLPLAHMF 302
Query: 114 ERACGYFIFSRGIELMYTA--VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSA 171
ER + G ++ + +R L DDL+ QP VP + ++ I Q
Sbjct: 303 ERVVETAMLCHGAKIGFFQGDIRLLMDDLKMLQPTIFPVVPRLLNRMFDKIFGQ------ 356
Query: 172 ARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLL 231
A TA KR F R + + + + LW
Sbjct: 357 --------------ANTALKRWLLDFASKRKEAELRSGIIRNNSLW-------------- 388
Query: 232 AEKLVYKKIQSAIGISKAGVSGGGSLPMH---IDLFYEAIGVKVQVGYGLTESSPVIAAR 288
+KL++ KIQ+++G K + G+ P+ + A+G + GYG TE + +
Sbjct: 389 -DKLIFHKIQASLG-GKVRLMITGAAPVSATVLTFLRAALGCQFYEGYGQTECTAGCSLS 446
Query: 289 RPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQAL 348
P G VG P+ IK+VD E A +G V V+G V +GY K+P T +AL
Sbjct: 447 IPGDWTAGHVGAPMPCNHIKLVDVEEMNYFAAKGEGEVCVKGPNVFKGYLKDPEKTAEAL 506
Query: 349 DEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRS 408
D+DGWL+TGD+G P+ G L + R K L+ GE + P ++E RS
Sbjct: 507 DKDGWLHTGDVGKWLPN----------GALKIIDRKKHIFKLAQGEYIAPEKIENVYQRS 556
Query: 409 SLIRQIVVIGQD-QRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTI 458
+ Q+ V G+ Q AI+VPD E V AK+ I EL + K +
Sbjct: 557 EPVAQVFVYGESLQAFLIAIVVPDPEAVCPWAKKRGI-QGSYGELCRNKDL 606
>gi|343503670|ref|ZP_08741479.1| putative long-chain-fatty-acid-CoA ligase [Vibrio ichthyoenteri
ATCC 700023]
gi|342814262|gb|EGU49209.1| putative long-chain-fatty-acid-CoA ligase [Vibrio ichthyoenteri
ATCC 700023]
Length = 602
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 127/424 (29%), Positives = 200/424 (47%), Gaps = 55/424 (12%)
Query: 65 VYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSR 124
+YTSGTTG PKGVML + N+ Q++ + + D L LP HV+ERA +++ R
Sbjct: 184 IYTSGTTGQPKGVMLDYANIGAQLQGHDQRLSLTDQDVSLCFLPLSHVFERAWTFYVLYR 243
Query: 125 GIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRI 183
G Y ++D L +P M +VP YE ++S I +++ + R+V+
Sbjct: 244 GATNCYLQDTMQVRDALSEIRPTVMSAVPRFYEKIFSAIHEKVSKAPFIRKVL------- 296
Query: 184 SFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSA 243
F + C ++ ++PS + L + LA+KLV K+++
Sbjct: 297 -FTWAVNMGAKMAVC-HQDGRKPSLM---------------LKKSYKLADKLVLSKLRAL 339
Query: 244 IGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPI 302
+G + GG L I F+ AIG+ V++GYG+TE++ ++ C S+G +
Sbjct: 340 LGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTATVSCWDDKCFDPASIGMSM 399
Query: 303 NHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWI 362
++KI E NE+L VRG VM+GY+K P T Q DE G+L TGD G I
Sbjct: 400 PGAQVKI--GENNEIL---------VRGPMVMRGYYKMPEETAQTFDEHGFLKTGDAGHI 448
Query: 363 APHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQR 422
+ G L + R K+ + S G+ + P +E A + I QI VI ++
Sbjct: 449 DEN----------GNLFITDRIKELMKTSNGKYIAPQVVEGAIGKDHFIEQIAVIADTRK 498
Query: 423 RPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLLYGELRKWTSKCSF 474
A+IVP + + AK L+I + D EL K E ++ L EL K+ F
Sbjct: 499 FVSALIVPCFDSLEEYAKELNIKYHDRVELIKHHQIVEMLESRVNDLQKELAKFEQVKKF 558
Query: 475 QIGP 478
++ P
Sbjct: 559 KLLP 562
>gi|343514857|ref|ZP_08751922.1| putative long-chain-fatty-acid-CoA ligase [Vibrio sp. N418]
gi|342799223|gb|EGU34798.1| putative long-chain-fatty-acid-CoA ligase [Vibrio sp. N418]
Length = 602
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 127/424 (29%), Positives = 200/424 (47%), Gaps = 55/424 (12%)
Query: 65 VYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSR 124
+YTSGTTG PKGVML + N+ Q++ + + D L LP HV+ERA +++ R
Sbjct: 184 IYTSGTTGQPKGVMLDYANIGAQLQGHDQRLSLTDQDVSLCFLPLSHVFERAWTFYVLYR 243
Query: 125 GIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRI 183
G Y ++D L +P M +VP YE ++S I +++ + R+V+
Sbjct: 244 GATNCYLQDTMQVRDALSEIRPTVMSAVPRFYEKIFSAIHEKVSKAPFIRKVL------- 296
Query: 184 SFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSA 243
F + C ++ ++PS + L + LA+KLV K+++
Sbjct: 297 -FTWAVNMGAKMAVC-HQDGRKPSLM---------------LKKSYKLADKLVLSKLRAL 339
Query: 244 IGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPI 302
+G + GG L I F+ AIG+ V++GYG+TE++ ++ C S+G +
Sbjct: 340 LGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTATVSCWDDKCFDPASIGMSM 399
Query: 303 NHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWI 362
++KI E NE+L VRG VM+GY+K P T Q DE G+L TGD G I
Sbjct: 400 PGAQVKI--GENNEIL---------VRGPMVMRGYYKMPEETAQTFDEHGFLKTGDAGHI 448
Query: 363 APHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQR 422
+ G L + R K+ + S G+ + P +E A + I QI VI ++
Sbjct: 449 DEN----------GNLFITDRIKELMKTSNGKYIAPQVVEGAIGKDHFIEQIAVIADTRK 498
Query: 423 RPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLLYGELRKWTSKCSF 474
A+IVP + + AK L+I + D EL K E ++ L EL K+ F
Sbjct: 499 FVSALIVPCFDSLEEYAKELNIKYHDRVELIKHHQIVEMLESRVNDLQKELAKFEQVKKF 558
Query: 475 QIGP 478
++ P
Sbjct: 559 KLLP 562
>gi|291456106|ref|ZP_06595496.1| putative CoA ligase [Bifidobacterium breve DSM 20213 = JCM 1192]
gi|291382515|gb|EFE90033.1| putative CoA ligase [Bifidobacterium breve DSM 20213 = JCM 1192]
Length = 615
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 134/467 (28%), Positives = 221/467 (47%), Gaps = 93/467 (19%)
Query: 55 TIGSDDIATYVYTSGTTGNPKGVMLTHKNLLH----QIRSLYDIVPAENGDKFLSMLPPW 110
T+ ++D+AT VYTSG+TGNPKG LTHKN + ++L+++V ++ + L LP
Sbjct: 186 TVRTNDLATIVYTSGSTGNPKGAELTHKNFVSITIAASQALHEVV-LDDHPRLLLFLPLA 244
Query: 111 HVYERACGYFIFSR--GIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLY--------S 160
H + R Y + G+ ++L DL+ ++P Y++ VP V+E +Y +
Sbjct: 245 HCFARFIQYASIASDDGVVGYLPDTKSLLPDLRSFEPTYLLGVPRVFEKVYNAASHKAGA 304
Query: 161 GIQKQIFTSSA-ARRVVAR---ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWL 216
G + ++F +A A RV +R A + +FA A + YE
Sbjct: 305 GWKGRLFLKAAEAARVWSRKEQAGEQHTFAEIAERAKYE--------------------- 343
Query: 217 WARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDL--FYEAIGVKVQV 274
LVY+ ++ A+G V+ GG+ P+ +DL FY IG+ +
Sbjct: 344 -----------------TLVYRTVRGALGPKIKYVACGGA-PLSLDLAHFYNGIGLPMIQ 385
Query: 275 GYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVM 334
GYG+TE++ AA R T NV+G+VG P + I+I D +G ++V+G V
Sbjct: 386 GYGMTETAAPFAATRVTDNVIGTVGQPAPGSSIRISD-----------EGELQVKGPNVF 434
Query: 335 QGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGE 394
+GY P T +A DGWL TGD+ I G +++ GR KD I+ + G+
Sbjct: 435 RGYHNLPEKTAEAFTADGWLRTGDLAEIDDE----------GRIIITGRIKDIIITAGGK 484
Query: 395 NVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEE--VLMAAKRLSIVHADASEL 452
NV P+ LEE + ++ VV+G + GA++ D E + + A LS + +
Sbjct: 485 NVSPIPLEEEIAKCPIVEHCVVVGDQRPFIGALVTLDPESLAIWLPAHGLST----ETPV 540
Query: 453 SKEKTISLLYGELRKWTSKCSFQIG------PIHVVDEPFTVNFLCL 493
+ T + + E++++ K + + V+D FT CL
Sbjct: 541 DRLATNAAVREEIQQYVDKANATVSRAESVRKFAVLDTQFTQENKCL 587
>gi|423223587|ref|ZP_17210056.1| hypothetical protein HMPREF1062_02242 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392638212|gb|EIY32059.1| hypothetical protein HMPREF1062_02242 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 616
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 132/441 (29%), Positives = 210/441 (47%), Gaps = 58/441 (13%)
Query: 58 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSM--LPPWHVYER 115
DD+A +YTSGTTG PKGVML H N + R ++DI + D+ +SM LP HV+E+
Sbjct: 194 DDDLANILYTSGTTGEPKGVMLHHSNYMEAFR-IHDIRLVDMTDQDISMNFLPLTHVFEK 252
Query: 116 ACGYFIFSRGIELMYTAVR--NLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 173
A Y +G+++ +R +++ ++ +P M SVP +E +Y+G+Q++I + +
Sbjct: 253 AWTYLCVHKGVQICIN-LRPVDIQTTIKEIRPTLMCSVPRFWEKVYAGVQEKIAQETGLK 311
Query: 174 RVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAE 233
+ + I++ +I+ L R K P ++ L + E
Sbjct: 312 KAMMLDAIKVG-------KIHNIDYL-RKGKTPPLMLHL---------------KYKFYE 348
Query: 234 KLVYKKIQSAIGISKAGV--SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPT 291
K VY ++ IGI + G ++P I F ++G+ + VGYGLTES+ ++
Sbjct: 349 KTVYALLKKTIGIENGNFFPTAGAAVPDEICEFVHSVGINMLVGYGLTESTATVSCFLNQ 408
Query: 292 CNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDED 351
+GSVG + E+KI D NE+L +RG + +GY+K AT A+D+D
Sbjct: 409 GYEIGSVGTVMPDVEVKIGDE--NEIL---------LRGKTITKGYYKKAEATAAAIDKD 457
Query: 352 GWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLI 411
GW +TGD G++ G L L R KD S G+ V P LE I
Sbjct: 458 GWFHTGDAGYLK-----------GDQLYLTERIKDLFKTSNGKYVSPQALETKLAIDRYI 506
Query: 412 RQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSK 471
QI +I ++ A+IVP V AK I + + EL + I L+ R T +
Sbjct: 507 DQIAIIADQRKFVSALIVPVYGFVKDYAKEKGIEYKNMEELLQHPKILGLF-RARIDTLQ 565
Query: 472 CSF----QIGPIHVVDEPFTV 488
F Q+ ++ EPF++
Sbjct: 566 QQFAHYEQVKRFTLLPEPFSM 586
>gi|359421871|ref|ZP_09213776.1| long-chain fatty-acid--CoA ligase FadD15 [Gordonia araii NBRC
100433]
gi|358242205|dbj|GAB11845.1| long-chain fatty-acid--CoA ligase FadD15 [Gordonia araii NBRC
100433]
Length = 602
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 129/425 (30%), Positives = 199/425 (46%), Gaps = 67/425 (15%)
Query: 28 DEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQ 87
DE++ G K D AR+ + + +DD A +YTSGTTG PKG MLTH NLL +
Sbjct: 159 DELVAAGA---KISDDEVTARR----QALRADDPAVLIYTSGTTGRPKGCMLTHSNLLSE 211
Query: 88 IRSLYD------IVPAENGDKFLSMLPPWHVYERACGYFIFSRGIEL-MYTAVRNLKDDL 140
+ ++ + P G + L LP HV+ A G+ + + + NL +
Sbjct: 212 VEAVLSGGLKQFLRP---GRRLLMFLPMAHVFAHAITLIAIRGGVAVGFFNDIPNLVPEF 268
Query: 141 QRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLT 200
++P ++SVP V+E +Y+ ++ + A A I Y A K
Sbjct: 269 AVFRPSLILSVPRVFEKVYNTARQNAHDDGKGKIFDAAASTAID--YNAAK--------- 317
Query: 201 RNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPM 259
+Q S +AL R+ H + +KLVY K+++A+G + +SGG L
Sbjct: 318 ---EQGSVGLAL------RL-------RHTVFDKLVYSKLRAALGGDCELAISGGAPLGA 361
Query: 260 HIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLP 319
+ F+ +G+ V GYGLTE++ A P +G+VG P+ ++I D
Sbjct: 362 RLGHFFSGVGIPVYEGYGLTETTAAFAVNTPGAVKVGTVGRPLAGNAVRIAD-------- 413
Query: 320 AGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLV 379
G + + G V GY+KNP AT +A+ DGW +TGDIG + G L
Sbjct: 414 ---DGEILLSGGVVFTGYWKNPEATDEAI-TDGWFHTGDIGKVDRD----------GFLS 459
Query: 380 LEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAA 439
+ GR K+ +V + G+NV P LE+A L+ Q +V+G Q GA++ D + V
Sbjct: 460 ITGRKKEILVTAGGKNVSPAGLEDAIRSHPLVSQALVVGDKQPFIGALVTLDADAVDGWK 519
Query: 440 KRLSI 444
R SI
Sbjct: 520 SRNSI 524
>gi|296269285|ref|YP_003651917.1| AMP-dependent synthetase and ligase [Thermobispora bispora DSM
43833]
gi|296092072|gb|ADG88024.1| AMP-dependent synthetase and ligase [Thermobispora bispora DSM
43833]
Length = 593
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 126/408 (30%), Positives = 196/408 (48%), Gaps = 65/408 (15%)
Query: 36 ESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRS----- 90
E K SD A + G D+AT +YTSGTTG PKG LTH NLL R+
Sbjct: 158 EQGKEVSDETLAERRTSR---GGPDLATIIYTSGTTGLPKGCRLTHDNLLFTARNVTQGP 214
Query: 91 ---LYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPH 146
L+++ G L LP H R + + +T ++N+ DLQ +P
Sbjct: 215 LSRLFEV----EGRSALLFLPLAHSLARLIQVALLETKTIIAHTPNIKNVAPDLQSSKPT 270
Query: 147 YMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQP 206
++++VP V+E +Y+ +++ + + + A + + AY+ + + G
Sbjct: 271 FLLAVPRVFEKVYNAAEQK--ATEEGKGKIFHAAVATAIAYS--RELDSGGPR------- 319
Query: 207 SYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAG-VSGGGSLPMHIDLFY 265
L RI AI +KLVY+K+++A G + VSGG +L + F+
Sbjct: 320 ---------LGTRIKHAIF-------DKLVYRKLRAATGGALTAAVSGGSALGERLGHFF 363
Query: 266 EAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGI 325
IG++V GYGLTE+S P N +G+VG P ++I D G
Sbjct: 364 RGIGIEVLEGYGLTETSAPSTVNIPGANKIGTVGKPFPGVSVRIAD-----------DGE 412
Query: 326 VKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAK 385
+ ++G V +GY+ N ATK+A+DE+GW +TGDIG + G L + GR K
Sbjct: 413 ILIKGRHVFEGYWNNERATKEAIDEEGWFHTGDIGELDED----------GYLRITGRKK 462
Query: 386 DTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 433
+ IV + G+NV P LE+A L+ Q++V+G ++ GA+I D E
Sbjct: 463 EIIVTAGGKNVAPAPLEDAIRAHRLVSQVMVVGDNRPFIGALITLDPE 510
>gi|119512747|ref|ZP_01631818.1| AMP-dependent synthetase and ligase [Nodularia spumigena CCY9414]
gi|119462615|gb|EAW43581.1| AMP-dependent synthetase and ligase [Nodularia spumigena CCY9414]
Length = 237
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 95/215 (44%), Positives = 126/215 (58%), Gaps = 11/215 (5%)
Query: 274 VGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQV 333
VGYGLTE++ + RRP N+ GS G PI TEI IVD +T + LP G KG+V RG Q+
Sbjct: 3 VGYGLTETAAALTTRRPEHNLRGSAGIPIPGTEIWIVDPKTRKTLPQGEKGLVLARGPQI 62
Query: 334 MQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTG 393
MQGY+ NP AT +A++ GW NT D+G++ LVL GR KDTIVLS G
Sbjct: 63 MQGYYHNPEATNKAINPKGWFNTEDLGFLTAQQD----------LVLTGREKDTIVLSNG 112
Query: 394 ENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELS 453
ENVEP +E A LRS I QIVV+GQD+R GA+IVP+ + + A+ + S+
Sbjct: 113 ENVEPEPIENACLRSDYIDQIVVVGQDRRSLGALIVPNWDNLEEWAENQGLQLNLDSQPV 172
Query: 454 KEKTISLLYGELRKWTSKCSF-QIGPIHVVDEPFT 487
+ L E+R S +I P ++ EPF+
Sbjct: 173 QNLFRQELDREVRNRPGYSSNDRIVPFRLISEPFS 207
>gi|384196585|ref|YP_005582329.1| AMP-binding protein [Bifidobacterium breve ACS-071-V-Sch8b]
gi|333109607|gb|AEF26623.1| AMP-binding enzyme [Bifidobacterium breve ACS-071-V-Sch8b]
Length = 607
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 135/467 (28%), Positives = 222/467 (47%), Gaps = 93/467 (19%)
Query: 55 TIGSDDIATYVYTSGTTGNPKGVMLTHKNLLH----QIRSLYDIVPAENGDKFLSMLPPW 110
T+ ++D+AT VYTSG+TGNPKG LTHKN + ++L+++V ++ + L LP
Sbjct: 178 TVRTNDLATIVYTSGSTGNPKGAELTHKNFVSITIAASQALHEVV-LDDHPRLLLFLPLA 236
Query: 111 HVYERACGYFIFSR--GIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLY--------S 160
H + R Y + G+ ++L DL+ ++P Y++ VP V+E +Y +
Sbjct: 237 HCFARFIQYASIASDDGVVGYLPDTKSLLPDLRSFEPTYLLGVPRVFEKVYNAASHKAGA 296
Query: 161 GIQKQIFTSSA-ARRVVAR---ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWL 216
G + ++F +A A RV +R A + +FA A + YE
Sbjct: 297 GWKGRLFLKAAEAARVWSRKEQAGEQHTFAEIAERAKYE--------------------- 335
Query: 217 WARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDL--FYEAIGVKVQV 274
LVY+ ++ A+G V+ GG+ P+ +DL FY IG+ +
Sbjct: 336 -----------------TLVYRTVRGALGPKIKYVACGGA-PLSLDLAHFYNGIGLPMIQ 377
Query: 275 GYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVM 334
GYG+TE++ AA R T NV+G+VG P + I+I D +G ++V+G V
Sbjct: 378 GYGMTETAAPFAATRVTDNVIGTVGQPAPGSSIRISD-----------EGELQVKGPNVF 426
Query: 335 QGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGE 394
+GY P T +A DGWL TGD+ I GR +++ GR KD I+ + G+
Sbjct: 427 RGYHNLPEKTAEAFTADGWLRTGDLAEI---DDEGR-------IIITGRIKDIIITAGGK 476
Query: 395 NVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEE--VLMAAKRLSIVHADASEL 452
NV P+ LEE + ++ VV+G + GA++ D E + + A LS + +
Sbjct: 477 NVSPIPLEEEIAKCPIVEHCVVVGDQRPFIGALVTLDPESLAIWLPAHGLST----ETPV 532
Query: 453 SKEKTISLLYGELRKWTSKCSFQIG------PIHVVDEPFTVNFLCL 493
+ T + + E++++ K + + V+D FT CL
Sbjct: 533 DRLATNAAVREEIQQYVDKANATVSRAESVRKFAVLDTQFTQENKCL 579
>gi|119717337|ref|YP_924302.1| AMP-dependent synthetase and ligase [Nocardioides sp. JS614]
gi|119537998|gb|ABL82615.1| AMP-dependent synthetase and ligase [Nocardioides sp. JS614]
Length = 600
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 122/414 (29%), Positives = 196/414 (47%), Gaps = 62/414 (14%)
Query: 26 SYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLL 85
+ D ++ LG +D +D + T D+AT +YTSGTTG PKG MLTH N +
Sbjct: 156 AVDNLVRLG-------ADISDEELEKRRTTATPLDLATLIYTSGTTGRPKGCMLTHGNFM 208
Query: 86 HQ----IRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDL 140
+ + L ++ ++ L LP HV+ R L +++ ++NL DL
Sbjct: 209 FELSVAVAELPELFEGDDSSTLL-FLPLAHVFARIIQVGCIKTRTRLGHSSDIKNLLADL 267
Query: 141 QRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLT 200
Q ++P ++++VP V+E +++ Q T+ R+ RA A TA +
Sbjct: 268 QEFKPTFILAVPRVFEKVFN-TASQKATADGRGRIFDRA------AETAI-----AYSRG 315
Query: 201 RNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPM 259
++ +PS V H + +LVY K+ +A+G S + VSGG L
Sbjct: 316 LDRGRPSLAVR---------------AKHAVFRRLVYGKLLAALGGSCRYAVSGGAPLGD 360
Query: 260 HIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLP 319
+ FY IG+ V GYGLTE++ + P +G+VG P+ T +++ D
Sbjct: 361 RLGHFYRGIGLTVLEGYGLTETTAALTVNLPDAIKVGTVGRPLPGTAVRVAD-------- 412
Query: 320 AGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLV 379
G + RG QV GY+ N +AT +AL+ D W +TGD+G + G +
Sbjct: 413 ---DGELLFRGGQVFAGYWHNETATSEALEPDAWFHTGDVGEVDDE----------GFVR 459
Query: 380 LEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 433
+ GR K+ +V + G+NV P LE+ LI Q +V+G Q A++ D+E
Sbjct: 460 ITGRKKEILVTAGGKNVAPAVLEDRLRAHVLIDQCMVVGDGQPFIAALVTIDRE 513
>gi|239917880|ref|YP_002957438.1| AMP-forming long-chain acyl-CoA synthetase [Micrococcus luteus NCTC
2665]
gi|281413623|ref|ZP_06245365.1| AMP-forming long-chain acyl-CoA synthetase [Micrococcus luteus NCTC
2665]
gi|239839087|gb|ACS30884.1| AMP-forming long-chain acyl-CoA synthetase [Micrococcus luteus NCTC
2665]
Length = 611
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 123/412 (29%), Positives = 192/412 (46%), Gaps = 84/412 (20%)
Query: 42 SDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIR-----SLYDIVP 96
+D D + + G D+AT +YTSGTTG PKG LTH+N + SL D+V
Sbjct: 170 TDVTDEELETRRSSAGLADLATIIYTSGTTGRPKGCELTHENFAELVNQTLSSSLGDVVR 229
Query: 97 AENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVY 155
+ +P HV+ R + G + + ++ L LQ +QP ++++VP V+
Sbjct: 230 QDTSTVLF--IPLAHVFARFVSVLTVAAGARCGHVSDIKRLSVSLQTFQPSFVLAVPRVF 287
Query: 156 ETLY--------SGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPS 207
E +Y SG +++IF R A IR
Sbjct: 288 EKIYNAALLNAQSGGKEKIF------RRGADVAIR------------------------- 316
Query: 208 YLVALIDWLWARIICA--ILWPLHL---LAEKLVYKKIQSAIGISKA-GVSGGGSLPMHI 261
W+R + + + PL L L+Y++I++A+G A VSGGG L +
Sbjct: 317 ---------WSRALDSGQMTAPLRLQRAFYSALIYRRIRTAMGGRLAYAVSGGGPLSTDL 367
Query: 262 DLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAG 321
F+ +GV + GYGLTE++ I RP +G+VGHP+ +++I AE E+L
Sbjct: 368 AHFFRGVGVTILEGYGLTETTAPITVGRPDRLKIGTVGHPLGGNQVRI--AEDGEIL--- 422
Query: 322 SKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLE 381
RG+ +M+GY P A ++A EDGW TGD+G + G L +
Sbjct: 423 ------TRGTSLMRGYHNRPEANEEAF-EDGWFRTGDLGALDDD----------GFLTIT 465
Query: 382 GRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 433
GR K+ +V + G+NV P LE+A +LI Q++V+G + AI+ D +
Sbjct: 466 GRKKELLVTAGGKNVAPAMLEDAIRSDALISQVMVVGDGKPFIAAIVTLDTD 517
>gi|117928184|ref|YP_872735.1| AMP-dependent synthetase and ligase [Acidothermus cellulolyticus
11B]
gi|117648647|gb|ABK52749.1| AMP-dependent synthetase and ligase [Acidothermus cellulolyticus
11B]
Length = 615
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 134/449 (29%), Positives = 202/449 (44%), Gaps = 68/449 (15%)
Query: 22 IPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTH 81
+P + +I+ G R ++D + +G+ +AT VYTSGTTG PKG +LTH
Sbjct: 152 VPNLQHIWVIEDGDLDRLTAQRASDDQLASARRELGAGSVATIVYTSGTTGRPKGCVLTH 211
Query: 82 KNLLHQIRSLYDIVPA--ENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKD 138
NLL RS +PA L LP HV+ R + + + L+
Sbjct: 212 GNLLFAARSAVGSLPALFHEHTSALLFLPLAHVFAREIQVACVEAAVPVGHCPDTYQLQT 271
Query: 139 DLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFC 198
DL ++P +++VP + E +Y AAR R R+ FA
Sbjct: 272 DLASFRPTLLLAVPYLLEKVY---------WLAARTAEQRGTSRL-FA-----------A 310
Query: 199 LTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSL 257
RN +Q S A + A + L ++LVY++I++A+G + + VSGG L
Sbjct: 311 AVRNAQQVS----------AGPVTAAVRVRRALFDRLVYRRIRAALGGAVEWVVSGGAPL 360
Query: 258 PMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEV 317
H+ F+ G+ V G+GLTE++ RP +G+VG P+ TE+ +
Sbjct: 361 APHLGHFFRGAGIPVLEGWGLTETTAAATVNRPDATKIGTVGLPLAGTEVGLT------- 413
Query: 318 LPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGV 377
+ G + VRG V GY+ +P+AT++ LD DGWL+TGD+G I G
Sbjct: 414 ----ADGELLVRGGHVFAGYWGDPAATQEVLDADGWLHTGDLGEI----------DDDGF 459
Query: 378 LVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLM 437
+ + GR K+ +V + G+NV P LE L+ VV+G + A+I D E V
Sbjct: 460 VTITGRRKEILVTAGGKNVAPAVLENRVAGHPLVAHCVVVGDGRPYVAALITLDPEAV-- 517
Query: 438 AAKRLSIVHADASELSKEKTISLLYGELR 466
DA + K SL ELR
Sbjct: 518 ----------DAWKQKMGKPASLTLAELR 536
>gi|421494648|ref|ZP_15941992.1| FADD [Morganella morganii subsp. morganii KT]
gi|400191071|gb|EJO24223.1| FADD [Morganella morganii subsp. morganii KT]
Length = 461
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 121/406 (29%), Positives = 193/406 (47%), Gaps = 47/406 (11%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 118
DD+ T +YTSGTTG PKGVML ++N+ Q+ + + D L LP HV+ERA
Sbjct: 42 DDLFTLIYTSGTTGEPKGVMLDYRNMAAQLYLHDERLTLTEDDVSLCFLPLTHVFERAWS 101
Query: 119 YFIFSRGIELMYTAVRNL-KDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 177
+++ G +Y + NL + + +P M +VP YE ++SGI +++ + +R +
Sbjct: 102 FYVMHTGALNVYLSDTNLVRKAMVSVKPTVMCAVPRFYEKVFSGIYEKVAQAPWYKRALF 161
Query: 178 RALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVY 237
+R K+ + R +KQ WL AR A+K V
Sbjct: 162 HWAVRTG------KKTLDA--QQRGEKQ--------SWLAARC--------DQFAQKKVL 197
Query: 238 KKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLG 296
K++ +G + + + G L I F+ AIG+ ++ GYG+TE+ ++ + LG
Sbjct: 198 GKLRDVLGGNVRFLPAAGARLDDEIIRFFLAIGINIKYGYGMTETCATVSCWENSGYQLG 257
Query: 297 SVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNT 356
S+G P+ E++I E NE ++VRG VM+GY+ P T+QA DGWL T
Sbjct: 258 SIGVPLPDVEVRI--GEENE---------IQVRGPVVMRGYYNKPEETRQAFTADGWLRT 306
Query: 357 GDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVV 416
GD G + G L + R KD + S G+ + P LE + I I V
Sbjct: 307 GDAGALDEQ----------GNLFITERLKDLMKTSNGKYIAPQMLEGTLGQDRFIEHIAV 356
Query: 417 IGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLY 462
+ ++ A+IVP + + A+ L++ + D EL K I L+
Sbjct: 357 VADARKFVSALIVPCFDTLEEHARALNLKYHDRMELLKNSQIVALF 402
>gi|238784583|ref|ZP_04628590.1| long-chain-fatty-acid--CoA ligase [Yersinia bercovieri ATCC 43970]
gi|238714549|gb|EEQ06554.1| long-chain-fatty-acid--CoA ligase [Yersinia bercovieri ATCC 43970]
Length = 589
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 117/430 (27%), Positives = 206/430 (47%), Gaps = 51/430 (11%)
Query: 41 FSDSNDARKHY----KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVP 96
F DA + + + ++ DD+ T +YTSGTTG PKGVML ++N+ Q+ +
Sbjct: 148 FEQQPDAVQQHLLTTRIDSCDLDDLFTLIYTSGTTGEPKGVMLDYRNMAAQLYLHDQRLT 207
Query: 97 AENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVY 155
D LS LP HV+ERA +++ G + +Y + + ++ +Q +P M +VP Y
Sbjct: 208 LTVDDVSLSFLPLSHVFERAWSFYVMHTGAQNVYISDTDWVRPAMQAVKPTVMCAVPRFY 267
Query: 156 ETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDW 215
E ++S I ++ + RR++ R +A +R ++ Q +L+
Sbjct: 268 EKVFSAINDKVALAKWHRRMLFR------WAVGCGERKFQNL-------QSGQTASLLSG 314
Query: 216 LWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQV 274
L ++ LA++LV K++ +G + + G L +I LF++AIG+ ++
Sbjct: 315 L-----------MYKLADRLVLSKLRGLLGGKVRFLPAAGARLDDNIILFFQAIGINIKY 363
Query: 275 GYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVM 334
GYG+TE+ ++ GS+G P+ ++++ G + ++VRG VM
Sbjct: 364 GYGMTETCATVSCWEERNFCFGSIGKPLPGIDVRL-----------GVENEIQVRGPIVM 412
Query: 335 QGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGE 394
+GYF P T ++ EDGWL TGD G + G L + R KD + S G+
Sbjct: 413 RGYFNKPQETAESFTEDGWLKTGDAGALDAK----------GNLFITERLKDLMKTSGGK 462
Query: 395 NVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK 454
+ P +E + I QI +I ++ A+IVP E + A+ +++ + D EL +
Sbjct: 463 YIAPQMIEGTLGQDRFIEQIAIIADTRKFVSALIVPCFESLEEYARSINLKYHDRLELLR 522
Query: 455 EKTISLLYGE 464
I L+ +
Sbjct: 523 HSHIVSLFEQ 532
>gi|333921588|ref|YP_004495169.1| acyl-CoA synthetase [Amycolicicoccus subflavus DQS3-9A1]
gi|333483809|gb|AEF42369.1| Acyl-CoA synthetase, long-chain fatty acid:CoA ligase
[Amycolicicoccus subflavus DQS3-9A1]
Length = 603
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 118/395 (29%), Positives = 191/395 (48%), Gaps = 69/395 (17%)
Query: 52 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSL---YDIVPAENGDKFLSMLP 108
+ +++ ++ +AT +YTSGTTG PKG LTH N L ++ ++ D + L LP
Sbjct: 177 RRDSLNAESLATLIYTSGTTGRPKGCTLTHANFLSEVANVTMQLDDLFGRRDCATLLFLP 236
Query: 109 PWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLY-SGIQK-- 164
HV+ R + + L +TA VR+L DDL ++P ++++VP V+E +Y + +QK
Sbjct: 237 LAHVFARVIQLGCVYQRVTLGHTADVRDLLDDLAGFRPTFILAVPRVFEKVYNTAVQKAD 296
Query: 165 -----QIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWAR 219
+IF +AA I+ Y+ + L
Sbjct: 297 AAGKGKIFNRAAA----------IAIQYS-------------------------EALDTG 321
Query: 220 IICAILWPLHLLAEKLVYKKIQSAIG-ISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGL 278
++ L L LVY+K++ ++G + +SGG +L + FY IG+ V GYGL
Sbjct: 322 VVPVGLRTRRALYNALVYRKLRKSLGGRATHAISGGSALGSRLGHFYRGIGLTVLEGYGL 381
Query: 279 TESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYF 338
TE++ I P +G+VG P+ ++I D G V V+G V GY+
Sbjct: 382 TETTAAITVNPPRYAKMGTVGLPVPGAVVRIAD-----------DGEVLVQGPMVFGGYW 430
Query: 339 KNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 398
+N AT +A+D DGW +TGDIG + G L + GR K+ IV + G+NV P
Sbjct: 431 RNEDATGEAIDNDGWFHTGDIGTLDEQ----------GYLAITGRKKEIIVTAGGKNVAP 480
Query: 399 LELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 433
+E+ L+ Q++V+G ++ GA++ D E
Sbjct: 481 AVIEDRIRAHPLVSQVMVVGDNEPFIGALVTLDAE 515
>gi|269122334|ref|YP_003310511.1| AMP-dependent synthetase and ligase [Sebaldella termitidis ATCC
33386]
gi|268616212|gb|ACZ10580.1| AMP-dependent synthetase and ligase [Sebaldella termitidis ATCC
33386]
Length = 819
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 117/378 (30%), Positives = 188/378 (49%), Gaps = 72/378 (19%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 118
DD A +YTSGTTGNPKGVML+ +NLL + + + D+ L++LP HV
Sbjct: 141 DDTAAMLYTSGTTGNPKGVMLSFENLLSNMEGIIAREIITDRDQTLALLPFHHVLPLMVT 200
Query: 119 YFIFSRGIELMYT---AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 175
+ G +++ A + + + L + + M+ VP VY+ L GI+ QI +S R+
Sbjct: 201 LVVMHSGASIVFVSKIASKEMLEALGKNRVTIMVGVPRVYKLLADGIKAQIDSSFLPRQ- 259
Query: 176 VARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKL 235
IY+ ++ K L ++A+
Sbjct: 260 -----------------IYKSTKFLKSMK-------LRKTIFAK---------------- 279
Query: 236 VYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVL 295
V+KK+ S + K +SGG L + + +E +G V GYGLTE+SP+IA T L
Sbjct: 280 VHKKLGSNL---KQLISGGAKLDVEVGELFERLGFYVTEGYGLTETSPIIAVATITERKL 336
Query: 296 GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLN 355
G+VG + TE+KIV+ E + ++G QVM+GY+ P TK+ + EDGWL
Sbjct: 337 GTVGKLLPRTEVKIVEDE------------IWIKGPQVMKGYYNKPDKTKEIITEDGWLK 384
Query: 356 TGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP--LELEEAALRSSLIRQ 413
TGD+G + G L ++GR IVLS G+N++P +E + A+ +LI++
Sbjct: 385 TGDLGDLDSE----------GYLTVKGRKSSMIVLSNGKNIDPEAIETKIQAISKNLIKE 434
Query: 414 IVVIGQDQRRPGAIIVPD 431
+ ++ ++++ AI+VPD
Sbjct: 435 LGIVPKNEKL-NAIVVPD 451
>gi|346992642|ref|ZP_08860714.1| AMP-binding enzyme [Ruegeria sp. TW15]
Length = 628
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 118/408 (28%), Positives = 198/408 (48%), Gaps = 49/408 (12%)
Query: 60 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG- 118
D A +YTSGTTGNPKG ML+H+N++ I + +P+++ D+ L LP H+ ER
Sbjct: 209 DTALLIYTSGTTGNPKGAMLSHENIMAAIEAGAHSLPSQSTDEQLCFLPLCHILERDVSI 268
Query: 119 -YFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 177
Y + + + + +LQ P +VP V+E +YS + +F + A
Sbjct: 269 YYPLAMKSTVNFAESPETVFANLQEVSPATFTAVPRVWEKIYSQV---MFMAKEATPTGR 325
Query: 178 RALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVY 237
A ++ A TA + LT + PS VA+ W W R LV
Sbjct: 326 FAFVQALKAGTA----RADYILT-GKPVPSP-VAMRFWFWDR---------------LVL 364
Query: 238 KKIQSAIGISKAGVSGGGSLPMHIDL--FYEAIGVKVQVGYGLTESSPVIAARRPTCNVL 295
+ ++ +G+ + G G+ P+ DL +Y AIGV + G+G+TE++ + A N +
Sbjct: 365 RNLRRMLGLDRLRRGGSGAAPISPDLLRWYWAIGVPIVEGFGMTETAGIAALNTLGVNKI 424
Query: 296 GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLN 355
G++G P+ +++I D +G ++V+G + QGY++N + T ++ DGWL
Sbjct: 425 GTIGMPVPGNDMRISD-----------EGEIQVKGLNIFQGYWRNNAKTAESFTCDGWLR 473
Query: 356 TGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIV 415
TGD+G I G + + GR KD I+ + G+N+ P E+E S I V
Sbjct: 474 TGDMGHIDED----------GFVTITGRLKDIIITAGGKNITPAEIESGLKFSQYISDAV 523
Query: 416 VIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYG 463
+IG ++ A+I+ D+E V A+ I ++ + L ++ L G
Sbjct: 524 IIGDRRKYLTALIMIDQENVEKFAQERKIPFSNFASLCAASEVTELIG 571
>gi|359776829|ref|ZP_09280132.1| putative long-chain fatty-acid--CoA ligase [Arthrobacter
globiformis NBRC 12137]
gi|359305966|dbj|GAB13961.1| putative long-chain fatty-acid--CoA ligase [Arthrobacter
globiformis NBRC 12137]
Length = 606
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 123/411 (29%), Positives = 201/411 (48%), Gaps = 63/411 (15%)
Query: 31 IDLGRESRKAFSDSN-DARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQ-- 87
+D R + A SD DAR+ + G D+AT +YTSGTTG PKG LTH N +
Sbjct: 156 LDTVRAAGAAVSDDELDARRR----SAGLRDLATIIYTSGTTGRPKGCELTHGNFVELSE 211
Query: 88 ---IRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTA-VRNLKDDLQRY 143
SL +V ++ + + LP HV+ R + G+ + +T +++L DLQ Y
Sbjct: 212 NALATSLSGVVNEQS--RTIMFLPLAHVFARFISVLAVAAGVTVAHTPDIKHLLPDLQSY 269
Query: 144 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQ 203
+P ++++VP V+E +Y+ + + + + AY+ R G L
Sbjct: 270 RPTFILAVPRVFEKVYNSALTK--AEDGGKGAIFHKAAETAIAYSR-ARQAGGAGLGLKL 326
Query: 204 KQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKA-GVSGGGSLPMHID 262
+ H + +KLVY K+++A+G A VSGGG L +
Sbjct: 327 R------------------------HAVFDKLVYGKLRAAMGGEVAHAVSGGGPLGERLG 362
Query: 263 LFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGS 322
F++ IG+++ GYGLTE++ ++ P +G+VG PI ++I D
Sbjct: 363 HFFQGIGLQILEGYGLTETTAPVSVNTPERIKIGTVGVPIPGNSVRIAD----------- 411
Query: 323 KGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEG 382
G + V+G VMQGY++ P T+++ DGW TGDIG + G L++ G
Sbjct: 412 DGEILVKGICVMQGYYQRPDLTEESF-ADGWFRTGDIGQLDDD----------GYLLITG 460
Query: 383 RAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 433
R K+ IV + G+NV P LE+ +L+ Q++V+G ++ GA++ D+E
Sbjct: 461 RKKEIIVTAGGKNVVPALLEDQIRADALVSQVLVVGDNRPFIGALVTLDEE 511
>gi|238755757|ref|ZP_04617090.1| long-chain-fatty-acid--CoA ligase [Yersinia ruckeri ATCC 29473]
gi|238706049|gb|EEP98433.1| long-chain-fatty-acid--CoA ligase [Yersinia ruckeri ATCC 29473]
Length = 599
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 120/436 (27%), Positives = 209/436 (47%), Gaps = 52/436 (11%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 118
+D+ T +YTSGTTG PKGVML ++N+ Q+ + + D LS LP HV+ERA
Sbjct: 180 NDLFTLIYTSGTTGEPKGVMLDYRNMAAQLYLHDERLTLTTDDISLSFLPLSHVFERAWS 239
Query: 119 YFIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 177
+++ G + +Y + + ++ +Q P M +VP YE ++S I +++ + RR +
Sbjct: 240 FYVMHTGAQNVYISNTDWVRQAMQAVSPTVMCAVPRFYEKVFSAIHEKVAQAKWYRRAL- 298
Query: 178 RALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVY 237
+A KR F + +QPS+ L+ LA++LV
Sbjct: 299 -----FHWAVGCGKR---KFRQQQQGRQPSWFSN---------------QLNRLADRLVL 335
Query: 238 KKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLG 296
+K++ +G + + G L ++ LF++AIG+ ++ GYG+TE+ ++ G
Sbjct: 336 QKLRGVLGGHVRFLPAAGARLDDNVILFFQAIGINIKYGYGMTETCATVSCWEEGRFRFG 395
Query: 297 SVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNT 356
S+G P+ E+++ G++ +++RG VM+GY P T +DGWL T
Sbjct: 396 SIGKPLPGIEVRM-----------GAENEIQIRGPIVMRGYLNKPEETAATFTQDGWLKT 444
Query: 357 GDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVV 416
GD G I G L + R KD + S G+ + P +E + I QI V
Sbjct: 445 GDAGAIDQQ----------GNLFITERLKDLMKTSGGKYIAPQMIEGTLGQDRFIEQIAV 494
Query: 417 IGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLY----GELRKWTSKC 472
I ++ A+IVP E + AK +++ + D EL + I ++ E++K SK
Sbjct: 495 IADTRKFVSALIVPCFESLEEYAKSINLKYHDRLELLRHSHIVEMFEQRLKEMQKELSKF 554
Query: 473 SFQIGPIHVVDEPFTV 488
Q+ ++ + F++
Sbjct: 555 E-QVKRFTLLPQAFSM 569
>gi|193215951|ref|YP_001997150.1| AMP-dependent synthetase and ligase [Chloroherpeton thalassium ATCC
35110]
gi|193089428|gb|ACF14703.1| AMP-dependent synthetase and ligase [Chloroherpeton thalassium ATCC
35110]
Length = 600
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 127/438 (28%), Positives = 204/438 (46%), Gaps = 68/438 (15%)
Query: 7 LWGKKSSVAPDIVEEIPVFSYD---------EIIDLGRESRKAFSDSNDARKHYKYETIG 57
L+ SS+AP I +++YD EI LG K+ ++ N+ K +
Sbjct: 118 LYETISSIAPSIPSLERIYTYDFIEEANHWHEITTLG----KSVANPNERLASLK-SRVS 172
Query: 58 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERAC 117
D+A +YTSGTTG PKGV LTHKNL+ + + + ++ +S LP H +ER
Sbjct: 173 ESDLAMLIYTSGTTGTPKGVCLTHKNLMANALAGAARMKSNPTERAISFLPLCHSFERII 232
Query: 118 GYFIFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVV 176
+G + Y +++ + DD++ +PH +VP + E +Y I + + + ++
Sbjct: 233 NCMYIYQGCSIYYAQSLQTVADDMKEVRPHVFATVPRMLEKVYDKILSKGNELTGIKYML 292
Query: 177 ARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLV 236
+ + + F Y PS + LW I + LA+KLV
Sbjct: 293 FKWSLGVGFKY-----------------DPSKASS----LWYAI-------QYRLADKLV 324
Query: 237 YKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCN-- 293
+ K + A G S +A VSGG +L + + A G+ + GYGL+E++PVI+ P
Sbjct: 325 FPKWREAFGGSVRAVVSGGAALQPRLAKLFFAAGIPIYEGYGLSETAPVISVNYPETGGF 384
Query: 294 VLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGW 353
+G+VG I E++I G + +G VMQGY T++ +D DGW
Sbjct: 385 KIGTVGTVIEGGEVRI-----------AGDGEILYKGPNVMQGYHNREDLTQEVIDSDGW 433
Query: 354 LNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQ 413
+TGDIG G L++ R K+ S G+ + P +E S I Q
Sbjct: 434 FHTGDIGEFD-----------GPFLMITDRKKELFKTSGGKYIAPQVIENKMKESRFIEQ 482
Query: 414 IVVIGQDQRRPGAIIVPD 431
I+VIG+ ++ P A+IVP+
Sbjct: 483 IMVIGEGRKFPAALIVPN 500
>gi|59712871|ref|YP_205647.1| long-chain-fatty-acid--CoA ligase [Vibrio fischeri ES114]
gi|59480972|gb|AAW86759.1| long-chain-fatty-acid--CoA ligase [Vibrio fischeri ES114]
Length = 612
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 128/428 (29%), Positives = 205/428 (47%), Gaps = 55/428 (12%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 118
DD+ T +YTSGTTG PKGVML ++N+ Q+ + D L LP HV+ERA
Sbjct: 186 DDLITLIYTSGTTGEPKGVMLDYENIASQLEGHNTRLALTEQDVSLCFLPLSHVFERAWT 245
Query: 119 YFIFSRGIELMYTAVRNL-KDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 177
+++ +G Y NL K+ L +P M +VP YE ++S + +++ + A R+V+
Sbjct: 246 FYVLYKGATNCYLPNTNLIKEALTEVKPTVMCAVPRFYEKIFSTVHEKVSRAPAHRKVMF 305
Query: 178 RALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVY 237
+ + +A ++ EG ++PS+ IL + +A+KLV
Sbjct: 306 TWAVNMGAKMSACQQ--EG-------REPSW---------------ILKQSYKVADKLVL 341
Query: 238 KKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLG 296
K++ +G + + GG L + I F+ A+GV V++GYG+TE++ I+
Sbjct: 342 SKLRMILGGNINFMPCGGAKLDVTIGRFFHALGVNVKLGYGMTETTATISCWEDGKFHPD 401
Query: 297 SVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNT 356
S+G + E+KI E +E+L VRG VM+GY+ P T+ EDG+L T
Sbjct: 402 SIGTLMPGAEVKI--GENSEIL---------VRGPMVMKGYYNKPEETESNFTEDGFLKT 450
Query: 357 GDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVV 416
GD G G L + R K+ + S G+ + P +E A + I QI V
Sbjct: 451 GDAGEF----------DADGNLYITDRIKELMKTSGGKYIAPQVIEGAIGKDHFIEQIAV 500
Query: 417 IGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLLYGELRKW 468
I ++ A+IVP + + AK L+I + D EL K EK ++ L EL ++
Sbjct: 501 IADTRKFVSALIVPCYDALEEYAKELNIAYHDRMELIKHSEIVEMLEKRVANLQKELARF 560
Query: 469 TSKCSFQI 476
F +
Sbjct: 561 EQVKKFTL 568
>gi|91791441|ref|YP_561092.1| AMP-dependent synthetase and ligase [Shewanella denitrificans
OS217]
gi|91713443|gb|ABE53369.1| AMP-dependent synthetase and ligase [Shewanella denitrificans
OS217]
Length = 597
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 117/396 (29%), Positives = 186/396 (46%), Gaps = 48/396 (12%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 118
DD+ T +YTSGTTG+PKGVML ++N+ IR + GD L+ LP HV+ER+
Sbjct: 179 DDLLTLIYTSGTTGDPKGVMLDYRNMASTIRQHDTCLNFNPGDTSLAFLPLSHVFERSWS 238
Query: 119 YFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 177
+F RG +Y +K+ + +PH + VP E +YS +Q ++ + +R+ +
Sbjct: 239 FFALCRGGRNVYLKDTMKIKEAIVAVRPHTLCVVPRFLEKVYSAVQDKVSKAPKSRQRL- 297
Query: 178 RALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVY 237
+A A +R +E + + + + S +++L W ++A KLV+
Sbjct: 298 -----FHWAMAAGQRQFE---VNQGRAKTSAILSL-QW--------------VVANKLVF 334
Query: 238 KKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLG 296
K+Q+ +G K GG +L M + F+ I + V GYG+TE++ + V G
Sbjct: 335 SKLQAVLGGRLKFMPCGGAALDMTVGNFFHGINLPVLCGYGMTETNATVTMNTLNNRVPG 394
Query: 297 SVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNT 356
S G P+ TE+K+ G+ + VRG VM+GY+K P T EDGWL T
Sbjct: 395 SNGKPLPETEVKL-----------GAFDEIMVRGDAVMRGYYKRPDDTAATF-EDGWLKT 442
Query: 357 GDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVV 416
GD G G L + R K+ + S G+ + P +E I Q+ +
Sbjct: 443 GDAGRFDEQ----------GNLFITDRIKELMKTSNGKYIAPQRVEGKVGSCPFIEQVAI 492
Query: 417 IGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASEL 452
I + A+IVP E + AK +V + L
Sbjct: 493 IADGRNFVSALIVPSFEALEYWAKEQGLVFDSLASL 528
>gi|226328341|ref|ZP_03803859.1| hypothetical protein PROPEN_02235 [Proteus penneri ATCC 35198]
gi|225203074|gb|EEG85428.1| AMP-binding enzyme [Proteus penneri ATCC 35198]
Length = 601
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 128/483 (26%), Positives = 224/483 (46%), Gaps = 60/483 (12%)
Query: 19 VEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETI--------GSDDIATYVYTSGT 70
+E + VF+ D +++ S + + + H++++ + DD+ T +YTSGT
Sbjct: 136 LEHVIVFNSDVVLNANTPS--CYLEDLINQTHFQHDDVLKQRINECSLDDLFTLIYTSGT 193
Query: 71 TGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRG-IELM 129
TG PKGVML + +L Q+ + + + D L LP HV+ERA +++ G + +
Sbjct: 194 TGEPKGVMLDYTSLASQLYLHDERLSLSDKDVSLCFLPLSHVFERAWSFYVMHTGAVNVY 253
Query: 130 YTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTA 189
T +++ + +P M +VP YE +YS IQ ++ +S R+++ + I+
Sbjct: 254 LTDTHAVREAMSEVKPTVMCAVPRFYEKVYSAIQDKVSQASVFRQLIFKWAIK-----QG 308
Query: 190 FKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKA 249
KR NQ+Q ++ L + A+K V ++ +G
Sbjct: 309 EKRREAQL----NQRQQGFISRLC---------------YRFADKKVLNPLRQILGGRVR 349
Query: 250 GV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIK 308
+ + G L + F+ A G+ ++ GYG+TE+ ++ LGS+G P+ E++
Sbjct: 350 FLPAAGARLDDAVIRFFLATGINIKYGYGMTETCATVSCWEENKYKLGSIGTPLPGIEVR 409
Query: 309 IVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSR 368
I G++ ++VRGS VM+GYF P T A EDGWL TGD G +
Sbjct: 410 I-----------GAENEIQVRGSIVMKGYFNKPEDTAAAFTEDGWLRTGDAGALDS---- 454
Query: 369 GRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAII 428
G+L + R KD + S G+ + P +E + I I VI ++ A+I
Sbjct: 455 ------DGMLFITERLKDLMKTSNGKYIAPQMIEGTLGQDRFIEHIAVIADTRKFVSALI 508
Query: 429 VPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGE-LRKWTSKCS--FQIGPIHVVDEP 485
VP + + A+ L++ + D EL + I L+ E LR+ S Q+ ++ E
Sbjct: 509 VPCFDALEEHARALNLKYHDRIELLRHTKIKELFDERLREMQKNFSSFHQVKRFTLLAEG 568
Query: 486 FTV 488
F++
Sbjct: 569 FSM 571
>gi|410088659|ref|ZP_11285349.1| Long-chain-fatty-acid--CoA ligase [Morganella morganii SC01]
gi|455740222|ref|YP_007506488.1| Long-chain-fatty-acid--CoA ligase [Morganella morganii subsp.
morganii KT]
gi|409764905|gb|EKN49030.1| Long-chain-fatty-acid--CoA ligase [Morganella morganii SC01]
gi|455421785|gb|AGG32115.1| Long-chain-fatty-acid--CoA ligase [Morganella morganii subsp.
morganii KT]
Length = 602
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 121/406 (29%), Positives = 193/406 (47%), Gaps = 47/406 (11%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 118
DD+ T +YTSGTTG PKGVML ++N+ Q+ + + D L LP HV+ERA
Sbjct: 183 DDLFTLIYTSGTTGEPKGVMLDYRNMAAQLYLHDERLTLTEDDVSLCFLPLTHVFERAWS 242
Query: 119 YFIFSRGIELMYTAVRNL-KDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 177
+++ G +Y + NL + + +P M +VP YE ++SGI +++ + +R +
Sbjct: 243 FYVMHTGALNVYLSDTNLVRKAMVSVKPTVMCAVPRFYEKVFSGIYEKVAQAPWYKRALF 302
Query: 178 RALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVY 237
+R K+ + R +KQ WL AR A+K V
Sbjct: 303 HWAVRTG------KKTLDA--QQRGEKQ--------SWLAARC--------DQFAQKKVL 338
Query: 238 KKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLG 296
K++ +G + + + G L I F+ AIG+ ++ GYG+TE+ ++ + LG
Sbjct: 339 GKLRDVLGGNVRFLPAAGARLDDEIIRFFLAIGINIKYGYGMTETCATVSCWENSGYQLG 398
Query: 297 SVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNT 356
S+G P+ E++I E NE ++VRG VM+GY+ P T+QA DGWL T
Sbjct: 399 SIGVPLPDVEVRI--GEENE---------IQVRGPVVMRGYYNKPEETRQAFTADGWLRT 447
Query: 357 GDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVV 416
GD G + G L + R KD + S G+ + P LE + I I V
Sbjct: 448 GDAGALDEQ----------GNLFITERLKDLMKTSNGKYIAPQMLEGTLGQDRFIEHIAV 497
Query: 417 IGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLY 462
+ ++ A+IVP + + A+ L++ + D EL K I L+
Sbjct: 498 VADARKFVSALIVPCFDTLEEHARALNLKYHDRMELLKNSQIVALF 543
>gi|315633673|ref|ZP_07888963.1| long-chain-fatty-acid--CoA ligase [Aggregatibacter segnis ATCC
33393]
gi|315477715|gb|EFU68457.1| long-chain-fatty-acid--CoA ligase [Aggregatibacter segnis ATCC
33393]
Length = 595
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 127/430 (29%), Positives = 195/430 (45%), Gaps = 55/430 (12%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 118
+D+ T +YTSGTTG PKGVML + NL HQ+ + + ++ D LS LP H++ERA
Sbjct: 177 EDLFTLIYTSGTTGEPKGVMLDYANLAHQLNAHDQALKVDDTDVSLSFLPLSHIFERAWV 236
Query: 119 YFIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 177
++ RG Y N ++ L +P M +VP YE +Y+ I ++ + R+ +
Sbjct: 237 AYVLHRGATNCYIEDTNQVRSALTEIRPTLMCAVPRFYEKIYTAILDKVHHAPKLRQRIF 296
Query: 178 RALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVY 237
I + + L + QK I +L + LA KLV
Sbjct: 297 HWAIDVGHQHFD--------ALAKGQK----------------IRFLLKQQYALANKLVL 332
Query: 238 KKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLG 296
K+++ +G + GG L I LF+ +IG+ +++GYG+TE++ ++
Sbjct: 333 GKLRALLGGRIRMMPCGGAKLESTIGLFFHSIGLNIKLGYGMTETTATVSCWDDLHFNAN 392
Query: 297 SVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNT 356
S+G + E KI E NE+L VRG VM+GY+K P T DG+L T
Sbjct: 393 SIGRLMPGAEAKI--GENNEIL---------VRGGMVMKGYYKKPQETADTFTADGFLKT 441
Query: 357 GDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVV 416
GD G G L + R K+ + S G+ + P LE + I QI V
Sbjct: 442 GDAGEFDAE----------GNLYITDRIKELMKTSNGKYIAPQVLESKIGKDKFIEQIAV 491
Query: 417 IGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLLYGELRKW 468
I ++ A+IVP + AK+++I + D EL K E+ I+ L EL W
Sbjct: 492 IADAKKYVSALIVPSYAALEEYAKQVNIKYQDRLELLKNSEILQMLEQRINELQKELAGW 551
Query: 469 TSKCSFQIGP 478
F + P
Sbjct: 552 EQIKRFTLLP 561
>gi|326203752|ref|ZP_08193615.1| AMP-dependent synthetase and ligase [Clostridium papyrosolvens DSM
2782]
gi|325986192|gb|EGD47025.1| AMP-dependent synthetase and ligase [Clostridium papyrosolvens DSM
2782]
Length = 537
Score = 164 bits (415), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 117/369 (31%), Positives = 174/369 (47%), Gaps = 66/369 (17%)
Query: 56 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYER 115
I D A V++SGTT N K ++LTH+NL I ++ D LS+LP H YE
Sbjct: 170 ISPDTAAEIVFSSGTTSNSKAIVLTHENLASNIAYCSQVIDVSVTDILLSILPNNHTYEL 229
Query: 116 ACGYF--IFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 173
G I+ + +++ +K +L+ Y+P MI VP V E L +K+I + A +
Sbjct: 230 TAGILTPIYFGATICLNDSLKMMKRNLKTYKPTIMIVVPAVLEML----RKEILKAVANQ 285
Query: 174 RVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAE 233
+N+K S A I IL +H+
Sbjct: 286 N--------------------------KNEKFSS----------AMKITKILKKVHINVS 309
Query: 234 KLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTC 292
+ ++ +I +G + + V GG LP+ I FY +G+K+ GYG+TE SP+++A
Sbjct: 310 RKLFGEILEVLGGNIRTFVCGGAFLPVEIIDFYTTMGIKLIQGYGITECSPLVSANTDRN 369
Query: 293 NVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDG 352
GSVG +KIVD E + V+G VM+GY+KNP T +A E+G
Sbjct: 370 GERGSVGKIGGGCSVKIVDNE------------IWVKGKNVMKGYYKNPEVT-EACMENG 416
Query: 353 WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIR 412
W TGD+G+I + G L + GR K+ +VLS GENV P ELE L I
Sbjct: 417 WFKTGDLGYIGKN----------GYLYITGRKKNLLVLSNGENVSPEELEGKLLALDCIN 466
Query: 413 QIVVIGQDQ 421
+++V G+D
Sbjct: 467 EVIVFGEDD 475
>gi|172041019|ref|YP_001800733.1| acyl-CoA synthetase [Corynebacterium urealyticum DSM 7109]
gi|448823988|ref|YP_007417156.1| acyl-CoA synthetase [Corynebacterium urealyticum DSM 7111]
gi|171852323|emb|CAQ05299.1| acyl-CoA synthetase [Corynebacterium urealyticum DSM 7109]
gi|448277485|gb|AGE36909.1| acyl-CoA synthetase [Corynebacterium urealyticum DSM 7111]
Length = 611
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 120/416 (28%), Positives = 198/416 (47%), Gaps = 61/416 (14%)
Query: 28 DEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQ 87
D +I+ GR+ +K D +AR + + D+ + VYTSGTTG PKG + H N L +
Sbjct: 161 DILINDGRD-KKISQDEVEAR----IADVRTSDVCSIVYTSGTTGRPKGCKVLHSNWLSE 215
Query: 88 IRSLYDI------VPAENGDKFLSMLPPWHVYERACGYFIFSRG-IELMYTAVRNLKDDL 140
R L +P G ++ LP HV RA Y + + G + ++ L +
Sbjct: 216 ARGLATHPIGRLGMP---GKSAVTFLPLAHVLSRAVSYLLLTTGCTQTHWSDFGTLVTEF 272
Query: 141 QRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLT 200
QR P+ ++ VP V+E +++G++ + S + +++ Y+ +G L
Sbjct: 273 QRSNPNMVLGVPRVFEKVHAGVRAKASDGSKIGEKLFERAEKVAVEYSKALDTPQGPNLA 332
Query: 201 RNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPM 259
+ + +KL+Y K++ A+G + +SGG +L
Sbjct: 333 LKTSRAIF------------------------DKLIYSKVREAMGGELEYAISGGSALNT 368
Query: 260 HIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLP 319
+ F+ +GV + GYGLTES+ I N++G+VG P+ ++I AE E+L
Sbjct: 369 ELMHFFRGVGVYIYEGYGLTESTAAITVNFEPDNIIGTVGRPVGGNTVRI--AEDGEIL- 425
Query: 320 AGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLV 379
++G + GY+ N ATK+A DEDG+ TGD+G + P G L
Sbjct: 426 --------LKGDVIFGGYWNNEEATKEAFDEDGFYATGDLGALLPT----------GHLR 467
Query: 380 LEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEV 435
+ GR K+ +V + G+NV P LE+ + LI Q +V+G DQ+ GA+I D+ V
Sbjct: 468 ITGRKKEILVTAGGKNVSPGPLEDILRSAPLISQAMVVGDDQKFIGALISLDEAAV 523
>gi|422023500|ref|ZP_16370005.1| long-chain-fatty-acid--CoA ligase [Providencia sneebia DSM 19967]
gi|414094268|gb|EKT55938.1| long-chain-fatty-acid--CoA ligase [Providencia sneebia DSM 19967]
Length = 605
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 119/414 (28%), Positives = 196/414 (47%), Gaps = 47/414 (11%)
Query: 60 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGY 119
D+ T +YTSGTTG PKGVML + N+ Q+ + + D LS LP HV+ERA +
Sbjct: 187 DLFTIIYTSGTTGEPKGVMLDYSNMEAQLYLHDQRLKLTSDDVSLSFLPLSHVFERAWSF 246
Query: 120 FIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 178
++ G +Y T +++ + +P M +VP YE +YS IQ ++ + RR++
Sbjct: 247 YVMHVGARNVYLTETNAVREAMVDVKPTVMCAVPRFYEKVYSVIQSKVANAPLHRRLM-- 304
Query: 179 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 238
F + + LT+N K A+ L+ +A+KLV
Sbjct: 305 ------FNWAIAQGQKRTRALTKNSK----------------TNALNGLLYKIADKLVLA 342
Query: 239 KIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 297
K++ +G + + G L +I F+ A G+ ++ GYG+TE+ ++ LGS
Sbjct: 343 KLRQVLGGRIRFMPAAGARLDDNIIAFFLAAGIDIKYGYGMTETCATVSCWEENHYPLGS 402
Query: 298 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 357
+G P++ E++I G ++V+G VM+GY+ P T+ A DGWL TG
Sbjct: 403 IGTPLSAVEVRI-----------GQDDEIQVKGPVVMKGYYNRPEETESAFTHDGWLKTG 451
Query: 358 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 417
D G I H G L + R KD + S G+ + P +E + I I VI
Sbjct: 452 DAGKIDVH----------GNLYITDRLKDLMKTSNGKYIAPQMIEGILGQDRFIEHIAVI 501
Query: 418 GQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSK 471
++ A+IVP + + A+ +++++ D EL K+ +I L+ + K K
Sbjct: 502 ADARKFVSALIVPCYDSLEEYARSINLIYRDRLELLKDSSIVALFDKRLKELQK 555
>gi|298346759|ref|YP_003719446.1| putative long-subunit-fatty-acid--CoA ligase [Mobiluncus curtisii
ATCC 43063]
gi|315656782|ref|ZP_07909669.1| long-chain-fatty-acid--CoA ligase [Mobiluncus curtisii subsp.
holmesii ATCC 35242]
gi|298236820|gb|ADI67952.1| possible long-chain-fatty-acid--CoA ligase [Mobiluncus curtisii
ATCC 43063]
gi|315492737|gb|EFU82341.1| long-chain-fatty-acid--CoA ligase [Mobiluncus curtisii subsp.
holmesii ATCC 35242]
Length = 612
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 133/454 (29%), Positives = 208/454 (45%), Gaps = 69/454 (15%)
Query: 52 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDK---FLSMLP 108
+ + D + + VYTSGTTG PKGV LT +N ++ + D +P +K L LP
Sbjct: 183 RLSAVNLDSLLSIVYTSGTTGRPKGVELTQRNFVYMALMIGDSLPEVVDNKKTRLLLFLP 242
Query: 109 PWHVYERACGYFIFS-RGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYS------- 160
HV+ R Y + S RG+ V+N+ +DLQ ++P MI VP V E +Y+
Sbjct: 243 LAHVFARFSSYTVLSGRGVLGCVPNVKNMLNDLQSFRPTSMIVVPRVLEKIYTAAQVKAG 302
Query: 161 -GIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWAR 219
G++ IF +AA+ I S A R + GF L R++
Sbjct: 303 RGLKHSIFNWAAAQ------AIHYSEALNDPNRKFVGFRLHRSRA--------------- 341
Query: 220 IICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGL 278
+A+KL++ K+ +G + +SGG L + F+ +G+ V G+GL
Sbjct: 342 -----------IADKLLFSKLLDLMGGECRWVISGGAPLGARLGHFFRGVGLTVIEGWGL 390
Query: 279 TESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYF 338
TE++ P +G+VG P+ E+KI + G + VR VM+GY
Sbjct: 391 TETAGPATGNLPGNIRIGTVGRPLPGVELKI-----------DASGEIFVRSRIVMRGYR 439
Query: 339 KNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 398
NP AT + LD DGW +GD+G I G L + GR K+ IV ++G+NV P
Sbjct: 440 NNPEATGEVLDSDGWFASGDLGEIDDD----------GYLSITGRKKELIVTASGKNVSP 489
Query: 399 LELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE--EVLMAAKRLSIVHADASELSKEK 456
LE++ L+ +VVIG + A++ D+E +A +L + + +
Sbjct: 490 APLEDSFRGHPLVSNVVVIGDKRPFVSALVTLDREMLPTWLANHKLPPMDPATAAIHPAV 549
Query: 457 TISLLYGELRKWTSKCSFQ-IGPIHVVDEPFTVN 489
SL+ G R S + I + V+ FTV+
Sbjct: 550 QESLMRGAQRASASVSRAESIRKVRVIIGDFTVD 583
>gi|288817523|ref|YP_003431870.1| long-chain-fatty-acid CoA ligase [Hydrogenobacter thermophilus
TK-6]
gi|384128289|ref|YP_005510902.1| AMP-dependent synthetase and ligase [Hydrogenobacter thermophilus
TK-6]
gi|288786922|dbj|BAI68669.1| long-chain-fatty-acid CoA ligase [Hydrogenobacter thermophilus
TK-6]
gi|308751126|gb|ADO44609.1| AMP-dependent synthetase and ligase [Hydrogenobacter thermophilus
TK-6]
Length = 829
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 134/422 (31%), Positives = 201/422 (47%), Gaps = 79/422 (18%)
Query: 60 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGY 119
D A +YTSGTTG PKGVML+ KNLL I+++ + A D L++LP H Y
Sbjct: 147 DTALILYTSGTTGEPKGVMLSFKNLLSNIKAIEKLQIATERDITLALLPFHHSYPLMVTL 206
Query: 120 ----FIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 175
+I + + L + L L+ Y+ ++ VP +Y+ + +Q++I T+ A
Sbjct: 207 LVPLYIGATVVFLEKLSSEELIKALKDYKVTILVGVPRLYQLMQKKVQERISTNPLAS-- 264
Query: 176 VARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKL 235
I F +A+ P AL WL+ W +H
Sbjct: 265 -------ILFKLSAY--------------LPK---ALRKWLF--------WKVH------ 286
Query: 236 VYKKIQSAIGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVL 295
QS G + VSGG LP+ F++ +G V GYGLTE+SP+++ P L
Sbjct: 287 -----QSLGGHIRFLVSGGAKLPIDTACFFDRLGFTVIEGYGLTETSPIVSFNPPHRVKL 341
Query: 296 GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLN 355
GSVG PI +KI G + VRG VMQGYFK P T++A +DGWL
Sbjct: 342 GSVGVPIEEVYVKI-----------AQDGEIMVRGVNVMQGYFKKPQETEKAF-KDGWLL 389
Query: 356 TGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAAL-RSSLIRQI 414
TGD+G++ G L + GR K+ IVL+ G+N+ P E+E L +S LI+++
Sbjct: 390 TGDLGYMDE----------DGYLYITGRKKEVIVLAGGKNINPEEIENLILSKSDLIKEV 439
Query: 415 VVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELRKWTSKCSF 474
V+ D A+I+PD E+ AK++ I+ + E K + + EL +W F
Sbjct: 440 GVLEVDGFL-HALILPDMEK----AKKMGIL--NVREYIKWTVLDRVNRELPEWKRITGF 492
Query: 475 QI 476
++
Sbjct: 493 KL 494
>gi|330831126|ref|YP_004394078.1| Long-chain-fatty-acid--CoA ligase [Aeromonas veronii B565]
gi|328806262|gb|AEB51461.1| Long-chain-fatty-acid--CoA ligase [Aeromonas veronii B565]
Length = 596
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 127/430 (29%), Positives = 201/430 (46%), Gaps = 55/430 (12%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 118
DD+ T +YTSGTTG PKGVML N+ + D L MLP HV+ERA
Sbjct: 176 DDLLTLIYTSGTTGEPKGVMLDFSNIAACFEMHNSRLDLNEQDVSLCMLPLSHVFERAWS 235
Query: 119 YFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 177
Y++ G E +Y + + D + QP M +VP +YE Y+ IQ ++ + A RR +
Sbjct: 236 YYVLYCGAENVYIRDPQKVMDVIGEVQPTVMCAVPRLYEKAYAMIQAKVAQAPALRRAL- 294
Query: 178 RALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVY 237
F + R+ + TR Q S L LW LAE+LV+
Sbjct: 295 -------FGWAT--RVGKQMVATR-QAGKSASPQLYGQLW-------------LAERLVF 331
Query: 238 KKIQSAIG-ISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLG 296
+K+++ G ++ G L ++LF++A+G+ ++ GYG+TE++ + + LG
Sbjct: 332 RKLRARFGGRTRFLPVAGARLADDVNLFFQAMGLNLKYGYGMTETTATVCCYEDSQFKLG 391
Query: 297 SVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNT 356
S+G +N E+K+ E NE+L VR VM+GY+ P AT + + EDG+L T
Sbjct: 392 SIGTALNGIEVKL--GENNELL---------VRSPTVMRGYYNKPDATAEVMTEDGFLRT 440
Query: 357 GDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVV 416
GD G + G + R K+ + S G+ V P +E + I QI +
Sbjct: 441 GDAGELDSQ----------GNIYFTERLKELMKTSNGKYVAPQLVEGTIGKDRFIEQIAI 490
Query: 417 IGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLLYGELRKW 468
+ + A+IVP E + A+ +++ + +EL + E I+ L EL K+
Sbjct: 491 VADARHFVSALIVPCFESLEEYARSINLQYQCKTELLRHSRVMEFFEARIADLQKELAKF 550
Query: 469 TSKCSFQIGP 478
F + P
Sbjct: 551 EQVKKFTLLP 560
>gi|56696723|ref|YP_167084.1| AMP-binding protein [Ruegeria pomeroyi DSS-3]
gi|56678460|gb|AAV95126.1| AMP-binding enzyme [Ruegeria pomeroyi DSS-3]
Length = 628
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 118/438 (26%), Positives = 205/438 (46%), Gaps = 53/438 (12%)
Query: 28 DEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQ 87
D + ++GRE+ K + +A + I +D+A +YTSGTTG PKG MLTH+N++
Sbjct: 181 DRLYEIGREAEKEEPGAFEA----EIAQIRPEDVALLIYTSGTTGMPKGAMLTHENIMAG 236
Query: 88 IRSLYDIVPAENGDKFLSMLPPWHVYERACG-YFIFSRGIELMYT-AVRNLKDDLQRYQP 145
I + +P E D+ L LP H+ ER YF + + + + + +LQ P
Sbjct: 237 IEAGAHRLPTEETDEQLCFLPLCHILERDVSIYFPLASKCTVNFAESPETVFANLQEVSP 296
Query: 146 HYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQ 205
+VP V+E +YS + ++ + R +R + L N+
Sbjct: 297 ATFTAVPRVWEKIYSQVLILAQEATPSGRAAFGMALRAGMKRAQY--------LVENKPV 348
Query: 206 PSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDL-- 263
P+ + A WLW R LV + ++ +G+ K G G+ P+ +L
Sbjct: 349 PAGVAANF-WLWDR---------------LVLRNLRRMLGMDKMRRGGTGAAPISPELLK 392
Query: 264 FYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSK 323
+Y AIGV + GYG+TE++ + P N +G++G + +++I +
Sbjct: 393 WYWAIGVPLVEGYGMTETAGIATINTPEENRIGTIGRVVPGIDVRIAEG----------- 441
Query: 324 GIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGR 383
G ++VRG + +GY++N T ++ +DGWL TGDIG + G + + GR
Sbjct: 442 GEIQVRGLNIFKGYWRNNEKTAESFTDDGWLRTGDIGRMDDD----------GYVTITGR 491
Query: 384 AKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLS 443
KD I+ + G+N+ P E+E S I V++G ++ +I+ D+E V A+
Sbjct: 492 LKDIIITAGGKNITPAEIESRLKFSHYISDAVIVGDKRKFLTCLIMIDQENVEKFAQDRK 551
Query: 444 IVHADASELSKEKTISLL 461
+ ++ + L K + L
Sbjct: 552 VPFSNFASLCAAKEVREL 569
>gi|305681101|ref|ZP_07403908.1| AMP-binding enzyme [Corynebacterium matruchotii ATCC 14266]
gi|305659306|gb|EFM48806.1| AMP-binding enzyme [Corynebacterium matruchotii ATCC 14266]
Length = 610
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 126/409 (30%), Positives = 191/409 (46%), Gaps = 55/409 (13%)
Query: 30 IIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIR 89
I L E R D D R H S D+A+ VYTSGTTG PKG LTH N L ++
Sbjct: 163 IATLKFEGRPIDDDQVDERIH----ATKSRDLASLVYTSGTTGRPKGCRLTHANWLSEVH 218
Query: 90 SLYDI---VPAENGDKFLSMLPPWHVYERACGYFI-FSRGIELMYTAVRNLKDDLQRYQP 145
L A G + L+ LP HV RA + G + ++ L + QR +P
Sbjct: 219 GLLTNPIGAIARPGSRVLTFLPLAHVLSRAVSLAVAIGGGTQSHWSNFSTLGVEFQRARP 278
Query: 146 HYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQ 205
+ ++ VP V+E +++ SA A +R + + A E +
Sbjct: 279 NLILGVPRVFEKVHN---------SAVANAAAGGPVRAALFHKARNVAIEYSRALDTSEG 329
Query: 206 PSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLF 264
PS ++ L H ++LVY KI++A+G S +SGG ++ I F
Sbjct: 330 PSRMLKL---------------QHKTYDRLVYSKIRAAMGNSVHYAISGGSAMSPEILHF 374
Query: 265 YEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKG 324
+ IG + GYGLTE++ A +G+VG PI ++I D +E+L
Sbjct: 375 FRGIGAPIYEGYGLTETTAA-ATVDFVDQKIGTVGPPIGGVSVRIND--DSEIL------ 425
Query: 325 IVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRA 384
++G+ V GY+ NP+AT ++ +DGW NTGD+G I G LV+ GR
Sbjct: 426 ---IKGTTVFDGYWNNPTATAESFTDDGWFNTGDLGEILE----------SGHLVITGRK 472
Query: 385 KDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 433
KD IV + G+NV P +E+A + LI Q +V+G + G ++ D++
Sbjct: 473 KDLIVTAGGKNVSPEPMEDALVAHPLISQAMVVGDGKPFIGLLVTLDED 521
>gi|309243088|ref|NP_001161101.2| long-chain-fatty-acid--CoA ligase 1 [Sus scrofa]
Length = 699
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 137/471 (29%), Positives = 215/471 (45%), Gaps = 65/471 (13%)
Query: 5 ILLWGKKSSVAPDIVEEIPVFSYD-EIIDLGRE------SRKAFSDSNDARKHYKYETIG 57
+LL G ++ + P + I + SY ++++ G++ S KA D A + K +
Sbjct: 209 LLLEGVENKLIPGLKTIILMDSYGIDLLERGKKCGVEIMSMKALEDLGRANRR-KPKPPA 267
Query: 58 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIV----PAENGDKFLSMLPPWHVY 113
+D+A +TSGTTGNPKG M+TH+N++ + + + D +S LP H++
Sbjct: 268 PEDLAVICFTSGTTGNPKGAMITHRNVVSDCSAFVKVTDKTFSPSSDDTLISFLPLAHMF 327
Query: 114 ERACGYFIFSRGIELMYTA--VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSA 171
ER + G ++ + +R L DDL+ QP VP + ++ I Q
Sbjct: 328 ERVVECVMLCHGAKIGFFQGDIRLLMDDLKALQPTIFPVVPRLLNRMFDRIFGQ------ 381
Query: 172 ARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLL 231
A T KR F R + + + + LW
Sbjct: 382 --------------ANTTLKRWLLDFASKRKEAELRSGIIRNNSLW-------------- 413
Query: 232 AEKLVYKKIQSAIGISKAGVSGGGSLPMH---IDLFYEAIGVKVQVGYGLTESSPVIAAR 288
+KL++ KIQS++G K + G+ P+ + A+G + GYG TE + +
Sbjct: 414 -DKLIFHKIQSSLG-GKVRLMVTGAAPVSATVLTFLRAALGCQFYEGYGQTECTAGCSLT 471
Query: 289 RPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQAL 348
P G VG P+ + IK+VD E L A +G V V+G V QGY K+P+ T +AL
Sbjct: 472 VPGDWTAGHVGAPMPCSLIKLVDVEEMNYLAAKGEGEVCVKGPNVFQGYLKDPAKTAEAL 531
Query: 349 DEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRS 408
D+DGWL+TGDIG P+ G L + R K L+ GE + P ++E LRS
Sbjct: 532 DKDGWLHTGDIGKWLPN----------GTLKIIDRKKHIFKLAQGEYIAPEKIENIYLRS 581
Query: 409 SLIRQIVVIGQD-QRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTI 458
+ Q+ V G+ Q AI+VPD E + A++ V EL + K +
Sbjct: 582 EPVAQVFVHGESLQAFLIAIVVPDVETLGHWAQKRGFV-GSFEELCRNKDV 631
>gi|359420882|ref|ZP_09212813.1| putative fatty-acid--CoA ligase [Gordonia araii NBRC 100433]
gi|358243155|dbj|GAB10882.1| putative fatty-acid--CoA ligase [Gordonia araii NBRC 100433]
Length = 609
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 121/430 (28%), Positives = 204/430 (47%), Gaps = 52/430 (12%)
Query: 52 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWH 111
++ + D+AT +YTSGTTG PKGV +TH+N++ ++ SL +I+ + D+ LS LP H
Sbjct: 169 RWRAVQPGDLATLIYTSGTTGPPKGVEITHRNIIAELASLREIIDVDFEDRLLSYLPAAH 228
Query: 112 VYERACGYFI-FSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTS 169
+ +R + RG ++ R + L +P + VP V++ + +GI+ ++
Sbjct: 229 IADRVSTHATNMIRGPQITSEPDPRAIAAALPDARPTFFFGVPRVWQKMKAGIEAKLAEE 288
Query: 170 SAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLH 229
S+ I+ A AF E L K PS L+ + H
Sbjct: 289 SSG--------IKSKLAGWAFSVGAEVADLRLQGKSPSGLLGI---------------QH 325
Query: 230 LLAEKLVYKKIQSAIGIS--KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAA 287
LA+KLV K++ AIG+ + SG S+P + FY +G+ V +G++E++ V
Sbjct: 326 GLADKLVLSKVRGAIGMDTIRVAASGAASIPPEVLRFYLGMGIPVLEVWGMSETTGVSTM 385
Query: 288 RRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQA 347
+G+VG PI E+K+ G G + VRG +M GY P T +
Sbjct: 386 TSEDNLAIGTVGRPIGGVEVKL-----------GEDGELFVRGPVIMAGYRNQPDKTAET 434
Query: 348 LDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEA-AL 406
+D DGWL TGD+ I G + + R K+ ++ +G+N+ P +E +
Sbjct: 435 IDADGWLATGDVAQIG----------ADGNVTIVDRKKELLINESGKNLAPTNIENSIKA 484
Query: 407 RSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLYGELR 466
SSLI QIV +G + A+IV D + ++ A + I D + +S + E+R
Sbjct: 485 TSSLIGQIVALGDGKPYVTALIVLDPDVAVVKAHQHGIDENDLAAISSHPEV---VAEVR 541
Query: 467 KWTSKCSFQI 476
K ++ + ++
Sbjct: 542 KAVTEGNAKL 551
>gi|108757205|ref|YP_631168.1| long-chain-fatty-acid--CoA ligase [Myxococcus xanthus DK 1622]
gi|108461085|gb|ABF86270.1| putative long-chain-fatty-acid--CoA ligase [Myxococcus xanthus DK
1622]
Length = 620
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 129/424 (30%), Positives = 201/424 (47%), Gaps = 62/424 (14%)
Query: 25 FSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNL 84
S ++I GR A D +AR + +D A+ +YTSGTTG+PKGV+LTH+N
Sbjct: 165 LSLADVIAQGRTEHAARPDDFEAR----VAGVSMEDTASIIYTSGTTGDPKGVILTHRNW 220
Query: 85 LHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYT-AVRNLKDDLQRY 143
+ ++ + D + LP HV+ + S G L+ +V L +L
Sbjct: 221 AFEAKAAQSVGMMVPSDSVMLFLPLAHVFAQVVKAAWLSMGYRLVVAESVDKLLANLVET 280
Query: 144 QPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQ 203
+P + SVP V+E +Y+ + + SAA + R L R +F ++++ + R+Q
Sbjct: 281 RPSVLPSVPRVFEKVYNNV---VANGSAAPGLKGR-LFRWAF------KLFDEYVEARSQ 330
Query: 204 KQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAI-----GISKAGVSGGGSLP 258
+ + LA+KLV+ K+ +AI G + +SGG L
Sbjct: 331 GREYATLGFA-----------------LAKKLVFSKVHAAISEKLGGNMRVFISGGAPLS 373
Query: 259 MHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVL 318
I F++ +G+KV GYGLTE+ R +GSVG P+ E+ I
Sbjct: 374 PKIGYFFDLLGLKVLEGYGLTETCAGTTVNREHKIKIGSVGAPVPGMEVMI--------- 424
Query: 319 PAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVL 378
S G + +RG VM+GY+KNP AT +A+D + W +TGDIG + + L
Sbjct: 425 --ASDGEILIRGPAVMKGYYKNPEATAEAIDAENWFHTGDIGELDADN----------YL 472
Query: 379 VLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKEEVLMA 438
+ R KD IV + G+NV P LE A ++I Q +V G D+R +++ EE
Sbjct: 473 RITDRKKDLIVTAGGKNVAPQNLENALKTHAIISQAMVYG-DKRPYLVVLITVSEE---G 528
Query: 439 AKRL 442
A+RL
Sbjct: 529 ARRL 532
>gi|315655304|ref|ZP_07908204.1| long-chain-fatty-acid--CoA ligase [Mobiluncus curtisii ATCC 51333]
gi|315490244|gb|EFU79869.1| long-chain-fatty-acid--CoA ligase [Mobiluncus curtisii ATCC 51333]
Length = 612
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 121/395 (30%), Positives = 186/395 (47%), Gaps = 66/395 (16%)
Query: 52 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDK---FLSMLP 108
+ + D + + VYTSGTTG PKGV LT +N ++ + D +P +K L LP
Sbjct: 183 RLSAVNLDSLLSIVYTSGTTGRPKGVELTQRNFVYMALMIGDSLPEVVDNKKTRLLLFLP 242
Query: 109 PWHVYERACGYFIFS-RGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYS------- 160
HV+ R Y + S RG+ V+N+ +DLQ ++P MI VP V E +Y+
Sbjct: 243 LAHVFARFSSYTVLSGRGVLGCVPNVKNMLNDLQSFRPTSMIVVPRVLEKIYTAAQVKSG 302
Query: 161 -GIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWAR 219
G++ IF +AA+ I S A R + GF L R++
Sbjct: 303 RGLKHSIFNWAAAQ------AIHYSEALNDPNRKFVGFRLHRSRA--------------- 341
Query: 220 IICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGL 278
+A+KL++ K+ +G + +SGG L + F+ +G+ V G+GL
Sbjct: 342 -----------IADKLLFSKLLDLMGGECRWVISGGAPLGARLGHFFRGVGLTVIEGWGL 390
Query: 279 TESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYF 338
TE++ P +G+VG P+ E+KI + G + VR VM+GY
Sbjct: 391 TETAGPATGNLPGNIRIGTVGRPLPGVELKI-----------DASGEIFVRSRIVMRGYR 439
Query: 339 KNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 398
NP AT + LD DGW +GD+G I G L + GR K+ IV ++G+NV P
Sbjct: 440 NNPEATGEVLDSDGWFASGDLGEIDDD----------GYLSITGRKKELIVTASGKNVSP 489
Query: 399 LELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 433
LE++ L+ +VVIG + A++ D+E
Sbjct: 490 APLEDSFRGHPLVSNVVVIGDKRPFVSALVTLDRE 524
>gi|407770692|ref|ZP_11118059.1| AMP-dependent synthetase/ligase [Thalassospira xiamenensis M-5 =
DSM 17429]
gi|407286266|gb|EKF11755.1| AMP-dependent synthetase/ligase [Thalassospira xiamenensis M-5 =
DSM 17429]
Length = 606
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 134/441 (30%), Positives = 202/441 (45%), Gaps = 67/441 (15%)
Query: 8 WGKKSSVAPDIVEEIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYVYT 67
WG+ V +I + ++++I GR +D DA I D +A +YT
Sbjct: 148 WGQS------FVGDITITRWEDMISQGR----GLTDDIDAW----VANIERDQLACLIYT 193
Query: 68 SGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDK--FLSMLPPWHVYERACG-YFIFSR 124
SGT G PKGVML+H +L +DI+ ++ FLS LP H YE G YF S
Sbjct: 194 SGTGGAPKGVMLSHGAILSNCMGAFDIIETLGIEEEVFLSFLPLSHSYEHTAGLYFPMSI 253
Query: 125 GIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIRI 183
G ++ Y ++ L +L +P M +VP +YE LY + + + ++ + +++
Sbjct: 254 GAQIYYAESLDRLAANLAEVRPTIMTAVPRLYEMLYQRMSRMVEKEGGFKQKLFNLTLKL 313
Query: 184 SFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSA 243
++ YE KQP L+ I +C IL L K Q
Sbjct: 314 G------RKTYE--------KQPLSLIEKIQ----NFVCEIL---------LRRKLRQRF 346
Query: 244 IGISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPIN 303
G KA VSGGG L + + + + G+++ GYG TE +PV++ R N L +VG P+
Sbjct: 347 GGRIKAMVSGGGPLNYELGVLFVSCGIRILQGYGQTEFAPVVSCNRAENNKLRTVGPPMV 406
Query: 304 HTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIA 363
E KI D G + +RG +M+GY+ P T + DGWL+TGDIG
Sbjct: 407 GAEAKIAD-----------DGEILLRGESMMKGYWNLPEVTAATII-DGWLHTGDIGKFD 454
Query: 364 PHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRR 423
G LV+ R KD IV S G+N+ P +E + I Q +V G D+
Sbjct: 455 EE----------GSLVITDRKKDIIVNSGGDNISPQRIEGLLTLETEISQAMVYGDDKPY 504
Query: 424 PGAIIVPDKEEVLMAAKRLSI 444
A++ PD++ + AK I
Sbjct: 505 LVAVLWPDEDFMREFAKENGI 525
>gi|449432710|ref|XP_004134142.1| PREDICTED: long chain acyl-CoA synthetase 7, peroxisomal-like
[Cucumis sativus]
Length = 695
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 133/409 (32%), Positives = 194/409 (47%), Gaps = 58/409 (14%)
Query: 58 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERAC 117
SDDIAT YTSGTTG PKG +LTH NL+ + + D ++S LP H+YERA
Sbjct: 255 SDDIATICYTSGTTGTPKGAVLTHGNLIASVAGCSLALKFFPSDVYISYLPLAHIYERAN 314
Query: 118 GYFIFSRGIELMYTAVRNLK--DDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 175
G+ + + N+K DD+ +P SVP +Y +Y+GI + TS +
Sbjct: 315 QVSTVYFGVAVGFYQGDNMKLMDDMIALRPTIFCSVPRLYNRIYAGIINAVKTSGVLKER 374
Query: 176 VARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKL 235
+ A AY + ++ N K PS LW +KL
Sbjct: 375 LFNA------AYNSKRQA------IMNGKSPS----------------PLW------DKL 400
Query: 236 VYKKIQSAIGISKAGVSGGGSLPMHIDL--FYE-AIGVKVQVGYGLTESSPVIAARRPTC 292
V+ KI++ +G + V G+ P+ D+ F + G V GYG+TE+S VI+A P
Sbjct: 401 VFNKIKAKLG-GRVRVLASGASPLSPDILEFLKICFGGVVFEGYGMTETSCVISAMDPDD 459
Query: 293 NVLGSVGHPINHTEIKIVDAE----TNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQAL 348
+ G VG P EIK+VD T++ P S+G + VRG V +GYFK+ T++A+
Sbjct: 460 TLCGHVGAPNPACEIKLVDVPEMNYTSDDQPY-SRGEICVRGPLVFKGYFKDEVQTREAV 518
Query: 349 DEDGWLNTGDIG-WIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALR 407
DEDGWL+TGDIG W+ GG L + R K+ L+ GE + P ++E +
Sbjct: 519 DEDGWLHTGDIGLWMQ-----------GGRLKIIDRKKNIFKLAQGEYIAPEKIENVYAK 567
Query: 408 SSLIRQIVVIGQDQRRPGAIIVPDKEEVLMA-AKRLSIVHADASELSKE 455
+ Q V G +V E L A A I + D ++L +
Sbjct: 568 CKFVAQCFVYGDSFNASLVAVVSVDVETLKAWASSEGIKYNDLAQLCND 616
>gi|254509714|ref|ZP_05121781.1| AMP-binding enzyme [Rhodobacteraceae bacterium KLH11]
gi|221533425|gb|EEE36413.1| AMP-binding enzyme [Rhodobacteraceae bacterium KLH11]
Length = 628
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 118/411 (28%), Positives = 198/411 (48%), Gaps = 50/411 (12%)
Query: 60 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG- 118
D A VYTSGTTGNPKG ML+H+N++ I + +P+ D+ L LP H+ ER
Sbjct: 209 DTALLVYTSGTTGNPKGAMLSHENIMAAIEAGAHSLPSLATDEQLCFLPLCHILERDVSI 268
Query: 119 -YFIFSRGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 177
Y + ++ + + +LQ P +VP V+E +Y+ +Q + ++ R V
Sbjct: 269 YYPLATKSTVNFAESPETVFANLQEVSPATFTAVPRVWEKIYAHVQFMVKEATPTGRFVF 328
Query: 178 RALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVY 237
++ + I G K LVA+ LW R LV+
Sbjct: 329 SRALKAGMVRAEY--ILAG-------KPVPALVAMRFGLWDR---------------LVF 364
Query: 238 KKIQSAIGISKAGVSGGGSLPMHIDL--FYEAIGVKVQVGYGLTESSPVIAARRPTCNVL 295
+ ++ +G+ + G G+ P+ DL +Y AIGV + G+G+TE++ + A N +
Sbjct: 365 RNLRRMLGMDRMRRGGSGAAPISPDLLRWYWAIGVPMVEGFGMTETAGIAALNTLEANKI 424
Query: 296 GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLN 355
G++G P+ +I+I + G ++V+G V QGY++N + T + DGWL
Sbjct: 425 GTIGKPVPGNDIRISE-----------DGEIQVKGLNVFQGYWRNNAKTAETFTADGWLR 473
Query: 356 TGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIV 415
TGD+G + G + + GR KD I+ + G+N+ P E+E A S I V
Sbjct: 474 TGDMGHVDED----------GFVTITGRLKDIIITAGGKNITPAEIESALKFSQYISDAV 523
Query: 416 VIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHAD-ASELSKEKTISLLYGEL 465
+IG ++ A+I+ D+E V A+ I ++ AS + + I+L+ E+
Sbjct: 524 MIGDRRKYLTALIMIDQENVEKFAQERKIPFSNFASLCAAPEVIALIEREI 574
>gi|296140376|ref|YP_003647619.1| AMP-dependent synthetase and ligase [Tsukamurella paurometabola DSM
20162]
gi|296028510|gb|ADG79280.1| AMP-dependent synthetase and ligase [Tsukamurella paurometabola DSM
20162]
Length = 601
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 123/388 (31%), Positives = 181/388 (46%), Gaps = 53/388 (13%)
Query: 50 HYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAE--NGDKFLSML 107
H + + D+AT +YTSGTTG PKG L H NL+ + ++ E G + L
Sbjct: 174 HAGRAGVKAADLATLIYTSGTTGRPKGCELMHSNLMSEAEAILASPFGEAIRGGSNVMFL 233
Query: 108 PPWHVYERACGYFIFSRGIEL-MYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQI 166
P HV RA F G + + +NL ++P ++SVP V+E +Y+ Q+
Sbjct: 234 PLAHVLARAVNIACFKGGAVVGHFNDTKNLVPQFAIFKPTLILSVPRVFEKVYASAQQSA 293
Query: 167 FTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILW 226
+ A A I ++ + ++ P +L
Sbjct: 294 VDGGKGKIFDAAAQTAIEYSES------------LDKGGPGL---------------VLK 326
Query: 227 PLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVI 285
H + +KLVY K+++A+G + K +SGG L + F+ +GV V GYGLTES+ I
Sbjct: 327 VKHAVFDKLVYGKLKAALGGNCKVAISGGAPLGARLGHFFRGVGVTVMEGYGLTESTAAI 386
Query: 286 AARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATK 345
+G+VG P+ KI AE E+L ++GS V +GY++N ATK
Sbjct: 387 TVNVEGAQKIGTVGRPLAGQGAKI--AEDGEIL---------LQGSVVFRGYWRNEEATK 435
Query: 346 QALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAA 405
AL EDGW +TGD+G I G L + GR K+ IV + G+NV P LE+A
Sbjct: 436 AAL-EDGWFHTGDLGSIDED----------GFLSITGRKKELIVTAGGKNVSPAGLEDAL 484
Query: 406 LRSSLIRQIVVIGQDQRRPGAIIVPDKE 433
+ LI Q +VIG Q A+I D E
Sbjct: 485 RGNPLISQAMVIGDAQPFIAALITIDPE 512
>gi|262277937|ref|ZP_06055730.1| AMP-dependent synthetase and ligase [alpha proteobacterium HIMB114]
gi|262225040|gb|EEY75499.1| AMP-dependent synthetase and ligase [alpha proteobacterium HIMB114]
Length = 563
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 126/416 (30%), Positives = 209/416 (50%), Gaps = 65/416 (15%)
Query: 24 VFSYDEIIDLGRESRKAFSD-SNDARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHK 82
+ S+D+I E+ + F + N+ K+ + +++ +D A +YTSGT GNPKGV+L+H
Sbjct: 138 IISFDKI-----ENVQNFHELKNNLNKNIRCKSL-RNDPACIIYTSGTQGNPKGVVLSHG 191
Query: 83 NLLHQI---RSLYDIVPAENGDKFLSMLPPWHVYERACGYFIFSRGIELMYTAV-RNLKD 138
++ ++L D + +N +F++ LP H YE + + G ++ Y+ V L D
Sbjct: 192 GIISNCEDSKNLVDELQVKNP-RFITWLPLSHSYEHTVQFVQIALGAKIFYSPVIEKLLD 250
Query: 139 DLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALIR-ISFAYTAFKRIYEGF 197
+++ +PH M +VP Y LY+ + + SS+ ++ R ++ + FK
Sbjct: 251 NIKIAKPHVMTAVPRFYNNLYNKMMSGVLKSSSFKK---RLFLKTVELGSKDFK------ 301
Query: 198 CLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQSAIGISKAGVSGGGSL 257
K+ S + I++L L++L K V I++ G KA VSGGG L
Sbjct: 302 -----NKKLSIIEKFINYL-----------LNILVRKKV---IKNFGGNLKAFVSGGGPL 342
Query: 258 PMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVGHPINHTEIKIVDA-ETNE 316
++ LF ++G+K GYGLTE+SPV++ CN P+N +I+ V A +N
Sbjct: 343 DQNVGLFLNSLGLKTLQGYGLTETSPVVS-----CN-------PVNKIKIETVGAIFSNN 390
Query: 317 VLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGG 376
+ G + V+G +M GY+KN AT Q L ++GWL+TGD+G I G
Sbjct: 391 KVKIAEDGEILVKGENIMLGYWKNEDATNQVL-KNGWLHTGDVGEIDDE----------G 439
Query: 377 VLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDK 432
L + R KD IV G+N+ P ++E I Q V G +Q+ ++V +K
Sbjct: 440 YLKITDRKKDIIVTLGGDNISPSKIENLLCLHDEIEQAYVHGDNQKYLSCLLVLNK 495
>gi|50604627|gb|AAT79534.1| acyl coenzyme A synthetase long-chain 1 [Sus scrofa]
Length = 683
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 138/472 (29%), Positives = 217/472 (45%), Gaps = 67/472 (14%)
Query: 5 ILLWGKKSSVAPDIVEEIPVFSYD-EIIDLGRE------SRKAFSDSNDARKHYKYETIG 57
+LL G ++ + P + I + SY ++++ G++ S KA D A + K +
Sbjct: 193 LLLEGVENKLIPGLKTIILMDSYGIDLLERGKKCGVEIMSMKALEDLGRANRR-KPKPPA 251
Query: 58 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIV-----PAENGDKFLSMLPPWHV 112
+D+A +TSGTTGNPKG M+TH+N++ + + P+ + D +S LP H+
Sbjct: 252 PEDLAVICFTSGTTGNPKGAMITHRNVVSDCSAFVKVTDKTFSPSSD-DTLISFLPLAHM 310
Query: 113 YERACGYFIFSRGIELMYTA--VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSS 170
+ER + G ++ + +R L DDL+ QP VP + ++ I Q
Sbjct: 311 FERVVECVMLCHGAKIGFFQGDIRLLMDDLKALQPTIFPVVPRLLNRMFDRIFGQ----- 365
Query: 171 AARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHL 230
A T KR F R + + + + LW
Sbjct: 366 ---------------ANTTLKRWLLDFASKRKEAELRSGIIRNNSLW------------- 397
Query: 231 LAEKLVYKKIQSAIGISKAGVSGGGSLPMH---IDLFYEAIGVKVQVGYGLTESSPVIAA 287
+KL++ KIQS++G K + G+ P+ + A+G + GYG TE + +
Sbjct: 398 --DKLIFHKIQSSLG-GKVRLMVTGAAPVSATVLTFLRAALGCQFYEGYGQTECTAGCSL 454
Query: 288 RRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQA 347
P G VG P+ + IK+VD E L A +G V V+G V QGY K+P+ T +A
Sbjct: 455 TVPGDWTAGHVGAPMPCSLIKLVDVEEMNYLAAKGEGEVCVKGPNVFQGYLKDPAKTAEA 514
Query: 348 LDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALR 407
LD+DGWL+TGDIG P+ G L + R K L+ GE + P ++E LR
Sbjct: 515 LDKDGWLHTGDIGKWLPN----------GTLKIIDRKKHIFKLAQGEYIAPEKIENIYLR 564
Query: 408 SSLIRQIVVIGQD-QRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTI 458
S + Q+ V G+ Q AI+VPD E + A++ V EL + K +
Sbjct: 565 SEPVAQVFVHGESLQAFLIAIVVPDVETLGHWAQKRGFV-GSFEELCRNKDV 615
>gi|296394475|ref|YP_003659359.1| AMP-dependent synthetase and ligase [Segniliparus rotundus DSM
44985]
gi|296181622|gb|ADG98528.1| AMP-dependent synthetase and ligase [Segniliparus rotundus DSM
44985]
Length = 599
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 122/394 (30%), Positives = 182/394 (46%), Gaps = 55/394 (13%)
Query: 46 DARKHYKYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYD----IVPAENGD 101
D+ + +G+D +AT +YTSGTTG PKGV LTH+N L ++ + + + P +
Sbjct: 167 DSELDSRRAQLGADKLATLIYTSGTTGRPKGVCLTHRNFLSEVIATQEPIKAMAPKQGRA 226
Query: 102 KFLSMLPPWHVYERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLYS 160
LP H++ RA S + + + ++ L +DLQ+ QP + SVP VYE +Y
Sbjct: 227 NTAMFLPMAHIFARALTITSMSANVLIEFLSSTATLSEDLQKIQPTILFSVPRVYEKVYD 286
Query: 161 GIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARI 220
S A EG ++ + VA + +
Sbjct: 287 -----------------------SAKKKAAAGGKEGIF----ERASAVAVAYSEAVENGK 319
Query: 221 ICAILWPLHLLAEKLVYKKIQSAIGISKAG-VSGGGSLPMHIDLFYEAIGVKVQVGYGLT 279
+L H L ++L+Y K+++A+G G VSGG ++ + F+ IGV V GYGLT
Sbjct: 320 PGVVLKLQHALFDRLLYSKLRAAVGGKVVGAVSGGAAISPRLAHFFNGIGVSVYQGYGLT 379
Query: 280 ESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFK 339
ES+ I P N +GSVG + +I D G V + G V Y++
Sbjct: 380 ESTAGITFNSPVANRVGSVGKLVAGCSARIAD-----------DGEVLLAGPVVFSEYWR 428
Query: 340 NPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPL 399
NP AT A+ EDGW + GD+G I G L + GR KD IV + G+NV P
Sbjct: 429 NPEATAGAI-EDGWFHCGDLGRIDED----------GFLYITGRKKDIIVTAGGKNVAPQ 477
Query: 400 ELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE 433
LEE +L+ Q VV+G + A++ D E
Sbjct: 478 VLEEVLKEHNLVSQGVVVGDGRPFIAALLTLDPE 511
>gi|426256226|ref|XP_004021742.1| PREDICTED: long-chain-fatty-acid--CoA ligase 1 isoform 1 [Ovis
aries]
Length = 699
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 139/472 (29%), Positives = 216/472 (45%), Gaps = 67/472 (14%)
Query: 5 ILLWGKKSSVAPDIVEEIPVFSY-DEIIDLGRE------SRKAFSDSNDARKHYKYETIG 57
+LL G ++ + P + + + SY ++++ G++ S KA D A + K +
Sbjct: 209 LLLEGVENKLIPCLKTIVLMDSYGSDLLERGKKCGVEIISMKAMEDLGRANRQ-KPKPPA 267
Query: 58 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDI-----VPAENGDKFLSMLPPWHV 112
+D+A +TSGTTGNPKG M+TH+N++ + + +P + D +S LP H+
Sbjct: 268 PEDLAVICFTSGTTGNPKGAMITHRNIVSDCSAFVKMTENTFIPTSD-DTLISFLPLAHM 326
Query: 113 YERACGYFIFSRGIELMYTA--VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSS 170
+ER + G ++ + +R L DDL+ QP VP + ++ I Q
Sbjct: 327 FERVVECVMLCHGAKIGFFQGDIRLLMDDLKALQPTIFPVVPRLLNRMFDRIFGQ----- 381
Query: 171 AARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHL 230
A T KR F R + + + + LW
Sbjct: 382 ---------------ANTTLKRWLLDFASKRKEAELRSGIIRNNSLW------------- 413
Query: 231 LAEKLVYKKIQSAIGISKAGVSGGGSLPMH---IDLFYEAIGVKVQVGYGLTESSPVIAA 287
+KL++ KIQS++G K + G+ P+ + A+G + GYG TE +
Sbjct: 414 --DKLIFHKIQSSLG-GKVRLMITGAAPVSATVLTFLRAALGCQFYEGYGQTECTAGCCL 470
Query: 288 RRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQA 347
P G VG P+ + IK+VD E L A +G V V+GS V QGY K+P T +A
Sbjct: 471 TIPGDWTAGHVGAPMPCSIIKLVDVEEMNYLAAKGEGEVCVKGSNVFQGYLKDPVKTAEA 530
Query: 348 LDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALR 407
LD+DGWL+TGDIG P+ G L + R K L+ GE + P ++E R
Sbjct: 531 LDKDGWLHTGDIGKWLPN----------GTLKIIDRKKHIFKLAQGEYIAPEKIENIYQR 580
Query: 408 SSLIRQIVVIGQD-QRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTI 458
S I Q+ V G+ Q AI+VPD E + A++ IV EL + K +
Sbjct: 581 SEPIAQVFVHGESLQAFLIAIVVPDVETLGAWAQKRGIV-GSFEELCRNKDV 631
>gi|426256230|ref|XP_004021744.1| PREDICTED: long-chain-fatty-acid--CoA ligase 1 isoform 3 [Ovis
aries]
Length = 665
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 139/472 (29%), Positives = 216/472 (45%), Gaps = 67/472 (14%)
Query: 5 ILLWGKKSSVAPDIVEEIPVFSY-DEIIDLGRE------SRKAFSDSNDARKHYKYETIG 57
+LL G ++ + P + + + SY ++++ G++ S KA D A + K +
Sbjct: 175 LLLEGVENKLIPCLKTIVLMDSYGSDLLERGKKCGVEIISMKAMEDLGRANRQ-KPKPPA 233
Query: 58 SDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDI-----VPAENGDKFLSMLPPWHV 112
+D+A +TSGTTGNPKG M+TH+N++ + + +P + D +S LP H+
Sbjct: 234 PEDLAVICFTSGTTGNPKGAMITHRNIVSDCSAFVKMTENTFIPTSD-DTLISFLPLAHM 292
Query: 113 YERACGYFIFSRGIELMYTA--VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSS 170
+ER + G ++ + +R L DDL+ QP VP + ++ I Q
Sbjct: 293 FERVVECVMLCHGAKIGFFQGDIRLLMDDLKALQPTIFPVVPRLLNRMFDRIFGQ----- 347
Query: 171 AARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHL 230
A T KR F R + + + + LW
Sbjct: 348 ---------------ANTTLKRWLLDFASKRKEAELRSGIIRNNSLW------------- 379
Query: 231 LAEKLVYKKIQSAIGISKAGVSGGGSLPMH---IDLFYEAIGVKVQVGYGLTESSPVIAA 287
+KL++ KIQS++G K + G+ P+ + A+G + GYG TE +
Sbjct: 380 --DKLIFHKIQSSLG-GKVRLMITGAAPVSATVLTFLRAALGCQFYEGYGQTECTAGCCL 436
Query: 288 RRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQA 347
P G VG P+ + IK+VD E L A +G V V+GS V QGY K+P T +A
Sbjct: 437 TIPGDWTAGHVGAPMPCSIIKLVDVEEMNYLAAKGEGEVCVKGSNVFQGYLKDPVKTAEA 496
Query: 348 LDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALR 407
LD+DGWL+TGDIG P+ G L + R K L+ GE + P ++E R
Sbjct: 497 LDKDGWLHTGDIGKWLPN----------GTLKIIDRKKHIFKLAQGEYIAPEKIENIYQR 546
Query: 408 SSLIRQIVVIGQD-QRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTI 458
S I Q+ V G+ Q AI+VPD E + A++ IV EL + K +
Sbjct: 547 SEPIAQVFVHGESLQAFLIAIVVPDVETLGAWAQKRGIV-GSFEELCRNKDV 597
>gi|334337306|ref|YP_004542458.1| long-chain-fatty-acid--CoA ligase [Isoptericola variabilis 225]
gi|334107674|gb|AEG44564.1| Long-chain-fatty-acid--CoA ligase [Isoptericola variabilis 225]
Length = 604
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 120/379 (31%), Positives = 185/379 (48%), Gaps = 52/379 (13%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPA--ENGDKFLSMLPPWHVYERA 116
DD+AT +YTSGTTG PKG LTH N + + VP G + L LP HV+ R
Sbjct: 179 DDLATIIYTSGTTGRPKGAELTHGNFASLAVNAVEAVPTVFTEGGRTLLFLPLAHVFARF 238
Query: 117 CGYFIFSRGIEL-MYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRV 175
+ G L + ++ + L+ ++P Y+++VP V+E +Y+ SA ++
Sbjct: 239 VEVLAIAAGTVLGHWGDLKTVTAGLESFRPTYILAVPRVFEKVYN---------SAEQKA 289
Query: 176 VARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKL 235
A ++I F + A I L K PS LW + H +A+KL
Sbjct: 290 AAGGKLKI-FHWAAATAIEWSRALD-TPKGPS--------LWLNV-------QHKVADKL 332
Query: 236 VYKKIQSAIG-ISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNV 294
VY K+++ +G ++ VSGGG L + F+ +G+ V GYGLTES+ + RP
Sbjct: 333 VYSKLRAVLGGQARHAVSGGGPLGERLGHFFRGLGLTVLEGYGLTESTAPTSVNRPDATK 392
Query: 295 LGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWL 354
+G+VG + +K+ A E+L +RG + +GY NP AT +A D + W
Sbjct: 393 IGTVGTQLPGCGVKL--APDGEIL---------LRGIHIFRGYHNNPEATAEAFDGE-WF 440
Query: 355 NTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQI 414
TGD+G + G L + GR K+ IV + G+NV P LE+ +L+ Q
Sbjct: 441 RTGDLGTLDDD----------GFLTITGRKKEIIVTAAGKNVAPAVLEDRIRAHALVSQC 490
Query: 415 VVIGQDQRRPGAIIVPDKE 433
VV+G ++ GA++ D E
Sbjct: 491 VVVGDNRPFIGALVTLDAE 509
>gi|359419517|ref|ZP_09211468.1| long-chain fatty-acid--CoA ligase [Gordonia araii NBRC 100433]
gi|358244478|dbj|GAB09537.1| long-chain fatty-acid--CoA ligase [Gordonia araii NBRC 100433]
Length = 594
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 130/442 (29%), Positives = 205/442 (46%), Gaps = 62/442 (14%)
Query: 3 FIILLWGKKSSVAPDIVEEIPVFSYDEIIDLGR--ESRKAFSDSNDARKHYKYETIGSDD 60
+IL +S D+++ +ID G E K D +DA + + D
Sbjct: 120 LVILESQAHASAHADVIKGCKDVRETLVIDDGAIAELTKRGKDVSDADLDARNAKASAAD 179
Query: 61 IATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPA--ENGDKFLSMLPPWHVYERACG 118
AT +YTSGTTG PKGV+LTH N + + ++ D + G L LP HV+ R
Sbjct: 180 AATLIYTSGTTGRPKGVVLTHANFMAEAAAVTDSLGTMMREGKSTLLFLPLAHVFARVIA 239
Query: 119 YFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 177
+ + +T+ + +L D L + P +++SVP V+E +Y+ +++ +
Sbjct: 240 VTALENRVIVGHTSDLTSLVDLLAAFSPDFVLSVPRVFEKVYNSAEQKAIDGGKGK---- 295
Query: 178 RALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPL---HLLAEK 234
F + E I+W A+ L H + +K
Sbjct: 296 -----------IFGKAAE---------------TAIEWSKAQDTGGAGLGLKLKHAVFDK 329
Query: 235 LVYKKIQSAIG-ISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCN 293
LVY K+++A+G +A VSGGG L + F+ GV + GYGLTE++ + RP
Sbjct: 330 LVYSKLRAALGGRCEAAVSGGGPLGARLGHFFRGAGVPIFEGYGLTETTAAVTVNRPDAQ 389
Query: 294 VLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGW 353
+GSVG P+ + I AE EVL ++G V GY+KN AT +A+ DGW
Sbjct: 390 QVGSVGRPVAGMSVAI--AEDGEVL---------LKGPVVFGGYWKNEKATAEAI-VDGW 437
Query: 354 LNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQ 413
+TGD+G + G L + GR K+ +V + G+NV P +LE+ ++L+ Q
Sbjct: 438 FHTGDLGSLND-----------GFLSITGRKKEILVTAGGKNVSPAQLEDTIRANALVSQ 486
Query: 414 IVVIGQDQRRPGAIIVPDKEEV 435
+V+G + GA+I D E V
Sbjct: 487 CLVVGDGKPFIGALITLDPEAV 508
>gi|304389536|ref|ZP_07371499.1| possible long-chain-fatty-acid--CoA ligase [Mobiluncus curtisii
subsp. curtisii ATCC 35241]
gi|304327346|gb|EFL94581.1| possible long-chain-fatty-acid--CoA ligase [Mobiluncus curtisii
subsp. curtisii ATCC 35241]
Length = 612
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 133/454 (29%), Positives = 207/454 (45%), Gaps = 69/454 (15%)
Query: 52 KYETIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDK---FLSMLP 108
+ + D + + VYTSGTTG PKGV LT +N ++ + D +P +K L LP
Sbjct: 183 RLSAVNLDSLLSIVYTSGTTGRPKGVELTQRNFVYMALMIGDSLPEVVDNKKTRLLLFLP 242
Query: 109 PWHVYERACGYFIFS-RGIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYS------- 160
HV+ R Y + S RG+ V+N+ +DLQ ++P MI VP V E +Y+
Sbjct: 243 LAHVFARFSSYTVLSGRGVLGCVPNVKNMLNDLQSFRPTSMIVVPRVLEKIYTAAQVKAG 302
Query: 161 -GIQKQIFTSSAARRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWAR 219
G++ IF +AA+ I S A R + GF L R++
Sbjct: 303 RGLKHSIFNWAAAQ------AIHYSEALNDPNRKFVGFRLHRSRA--------------- 341
Query: 220 IICAILWPLHLLAEKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGL 278
+A+KL++ K+ +G + +SGG L + F+ +G+ V G+GL
Sbjct: 342 -----------IADKLLFSKLLDLMGGECRWVISGGAPLGARLGHFFRGVGLTVIEGWGL 390
Query: 279 TESSPVIAARRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYF 338
TE++ P +G+VG P+ E+KI G + VR VM+GY
Sbjct: 391 TETAGPATGNLPGNIRIGTVGRPLPGVELKI-----------DVSGEIFVRSRIVMRGYR 439
Query: 339 KNPSATKQALDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEP 398
NP AT + LD DGW +GD+G I G L + GR K+ IV ++G+NV P
Sbjct: 440 NNPEATGEVLDSDGWFASGDLGEIDDD----------GYLSITGRKKELIVTASGKNVSP 489
Query: 399 LELEEAALRSSLIRQIVVIGQDQRRPGAIIVPDKE--EVLMAAKRLSIVHADASELSKEK 456
LE++ L+ +VVIG + A++ D+E +A +L + + +
Sbjct: 490 APLEDSFRGHPLVSNVVVIGDKRPFVSALVTLDREMLPTWLANHKLPPMDPATAAIHPAV 549
Query: 457 TISLLYGELRKWTSKCSFQ-IGPIHVVDEPFTVN 489
SL+ G R S + I + V+ FTV+
Sbjct: 550 QESLMRGAQRASASVSRAESIRKVRVIIGDFTVD 583
>gi|406675652|ref|ZP_11082839.1| hypothetical protein HMPREF1170_01047 [Aeromonas veronii AMC35]
gi|404627042|gb|EKB23848.1| hypothetical protein HMPREF1170_01047 [Aeromonas veronii AMC35]
Length = 596
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 126/430 (29%), Positives = 201/430 (46%), Gaps = 55/430 (12%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 118
DD+ T +YTSGTTG PKGVML N+ + D L MLP HV+ERA
Sbjct: 176 DDLLTLIYTSGTTGEPKGVMLDFSNIAACFEMHNSRLDLNQQDVSLCMLPLSHVFERAWS 235
Query: 119 YFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 177
Y++ G E +Y + + D + QP M +VP +YE Y+ IQ ++ + A RR +
Sbjct: 236 YYVLYCGAENVYIRDPQKVMDVIGEVQPTVMCAVPRLYEKAYAMIQAKVAQAPALRRAL- 294
Query: 178 RALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVY 237
F + ++ + TR Q S L LW LAE+LV+
Sbjct: 295 -------FGWAT--KVGKQMVATR-QAGKSASPQLYGQLW-------------LAERLVF 331
Query: 238 KKIQSAIG-ISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLG 296
+K+++ G ++ G L ++LF++A+G+ ++ GYG+TE++ + + LG
Sbjct: 332 RKLRARFGGRTRFLPVAGARLADDVNLFFQAMGLNLKYGYGMTETTATVCCYEDSQFKLG 391
Query: 297 SVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNT 356
S+G +N E+K+ E NE+L VR VM+GY+ P AT + + EDG+L T
Sbjct: 392 SIGTALNGIEVKL--GENNELL---------VRSPTVMRGYYNKPDATAEVMTEDGFLRT 440
Query: 357 GDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVV 416
GD G + G + R K+ + S G+ V P +E + I QI +
Sbjct: 441 GDAGELDSQ----------GNIYFTERLKELMKTSNGKYVAPQLVEGTIGKDRFIEQIAI 490
Query: 417 IGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLLYGELRKW 468
+ + A+IVP E + A+ +++ + +EL + E I+ L EL K+
Sbjct: 491 VADARHFVSALIVPCFESLEEYARSINLQYQCKTELLRHSRVMEFFEARIADLQKELAKF 550
Query: 469 TSKCSFQIGP 478
F + P
Sbjct: 551 EQVKKFTLLP 560
>gi|261416778|ref|YP_003250461.1| AMP-dependent synthetase and ligase [Fibrobacter succinogenes
subsp. succinogenes S85]
gi|385791611|ref|YP_005822734.1| AMP-binding family protein [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|261373234|gb|ACX75979.1| AMP-dependent synthetase and ligase [Fibrobacter succinogenes
subsp. succinogenes S85]
gi|302327983|gb|ADL27184.1| AMP-binding family protein [Fibrobacter succinogenes subsp.
succinogenes S85]
Length = 601
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 118/377 (31%), Positives = 179/377 (47%), Gaps = 56/377 (14%)
Query: 55 TIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAEN-GDKFLSMLPPWHVY 113
TI DDI + +YTSG+TG PKGV LTH+N+L QI+++ + +N D L++LP HV
Sbjct: 187 TINPDDIFSIIYTSGSTGCPKGVELTHRNMLVQIQNIKPMFRFDNKKDTCLTILPVAHVL 246
Query: 114 ERACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAA 172
ER YF G+ + + +NL L+ +P MI VP + E LY + T+S
Sbjct: 247 ERMAVYFYTFSGVTIYFGDNPKNLSHILREVRPTIMIVVPRILERLYESMT----TASDR 302
Query: 173 RRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLA 232
+ + R LI+ + K F PLH +
Sbjct: 303 AKGIKRFLIKQAIKIAKIKDPNRRF----------------------------EPLHWVF 334
Query: 233 EKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPT 291
+LVYK+++ A+G + + +SG +L I F IG+ V GYG+TE SPV++A
Sbjct: 335 NRLVYKQMREAVGGNFRMIISGSSALNKSILRFLLNIGLPVFEGYGMTECSPVVSANCKQ 394
Query: 292 CNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDED 351
GS+G P+ H +++I E NE +++RG V +GY P + D
Sbjct: 395 AIRPGSIGKPLAHLDVRI--GECNE---------IQIRGESVFKGYHNRPDLNAKNFTPD 443
Query: 352 GWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLI 411
G+ ++GD G+ G L GR K+ + STG+ V P +E R L+
Sbjct: 444 GFYHSGDQGYFDK----------DGFLYFTGRIKELLKTSTGKYVSPNPIELEITRHPLV 493
Query: 412 RQIVVIGQDQRRPGAII 428
Q +VI D++ AII
Sbjct: 494 EQALVIANDRKFASAII 510
>gi|373486529|ref|ZP_09577202.1| AMP-dependent synthetase and ligase [Holophaga foetida DSM 6591]
gi|372011390|gb|EHP11985.1| AMP-dependent synthetase and ligase [Holophaga foetida DSM 6591]
Length = 607
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 123/401 (30%), Positives = 195/401 (48%), Gaps = 47/401 (11%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPA----ENGDKFLSMLPPWHVYE 114
+D+ T +YTSGTTG+PKG ML+H NL+ I ++ A E GD+ LS+LP HV+E
Sbjct: 176 EDLLTLIYTSGTTGDPKGAMLSHGNLMSNILDTVEVAVAALRPERGDRCLSVLPISHVFE 235
Query: 115 RACGYF-IFSRGIELMYT-AVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAA 172
R G++ +F GI + Y ++ +L +L QP +++VP ++E +Y+ ++ +
Sbjct: 236 RTGGHYTMFYLGIAIYYAESLISLPANLLEVQPVVLMAVPRIFEKIYARVRDMATSGGLL 295
Query: 173 RRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLA 232
+R+ +A + R L R QP L+ L LA
Sbjct: 296 KRMA------FGWASSTCHRAVRHLYLNR---QPRGLLRL---------------QLELA 331
Query: 233 EKLVYKKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPT 291
++++ KI+ G + V+GG +L I F+ A+GV + GYGLTE+SP++ R
Sbjct: 332 DRILLSKIREKTGGRLRFCVTGGSALNPRIMEFFWAMGVPIYEGYGLTETSPILTLNRLG 391
Query: 292 CNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDED 351
G VG+PI + + L G + G VMQGY+++ AT+ D D
Sbjct: 392 KVRPGYVGNPI------LRQYKDRPFLKLAPDGEILCAGPNVMQGYWRDEEATRDVFDSD 445
Query: 352 GWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLI 411
G+ TGD+G R G V + + R K+ IV + G+NV P +E A I
Sbjct: 446 GYFLTGDVGEFD---------RLGRVKITD-RKKEIIVTNAGKNVAPQPIENALRADDYI 495
Query: 412 RQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASEL 452
Q V++G + AIIVP + +R + AD +E+
Sbjct: 496 EQAVLVGDHKNYLAAIIVPHLPALREWCQRKHLAFADDAEM 536
>gi|423208221|ref|ZP_17194775.1| hypothetical protein HMPREF1169_00293 [Aeromonas veronii AER397]
gi|404619268|gb|EKB16184.1| hypothetical protein HMPREF1169_00293 [Aeromonas veronii AER397]
Length = 596
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 128/435 (29%), Positives = 204/435 (46%), Gaps = 65/435 (14%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNL-----LHQIRSLYDIVPAENGDKFLSMLPPWHVY 113
DD+ T +YTSGTTG PKGVML N+ +H R + D L MLP HV+
Sbjct: 176 DDLLTLIYTSGTTGEPKGVMLDFSNIAACFEMHNCR-----LDLNQQDVSLCMLPLSHVF 230
Query: 114 ERACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAA 172
ERA Y++ G E +Y + + D + QP M +VP +YE Y+ IQ ++ + A
Sbjct: 231 ERAWSYYVLYCGAENVYIRDPQKVMDVIGEVQPTVMCAVPRLYEKAYAMIQAKVAQAPAL 290
Query: 173 RRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLA 232
RR + F + ++ + TR Q S L LW LA
Sbjct: 291 RRAL--------FGWAT--KVGKQMVATR-QAGKSASPLLYGQLW-------------LA 326
Query: 233 EKLVYKKIQSAIG-ISKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPT 291
E+LV++K+++ G ++ G L ++LF++A+G+ ++ GYG+TE++ + +
Sbjct: 327 ERLVFRKLRARFGGRTRFLPVAGARLADDVNLFFQAMGLNLKYGYGMTETTATVCCYEDS 386
Query: 292 CNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDED 351
LGS+G +N E+K+ E NE+L VR VM+GY+ P AT + + ED
Sbjct: 387 QFKLGSIGTALNGIEVKL--GENNELL---------VRSPTVMRGYYNKPDATAEVMTED 435
Query: 352 GWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLI 411
G+L TGD G + G + R K+ + S G+ V P +E + I
Sbjct: 436 GFLRTGDAGELDSQ----------GNIYFTERLKELMKTSNGKYVAPQLVEGTIGKDRFI 485
Query: 412 RQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLLYG 463
QI ++ + A+IVP E + A+ +++ + +EL + E I+ L
Sbjct: 486 EQIAIVADARHFVSALIVPCFESLEEYARSINLQYQCKTELLRHSRVMEFFEARIADLQK 545
Query: 464 ELRKWTSKCSFQIGP 478
EL K+ F + P
Sbjct: 546 ELAKFEQVKKFTLLP 560
>gi|433648555|ref|YP_007293557.1| AMP-forming long-chain acyl-CoA synthetase [Mycobacterium smegmatis
JS623]
gi|433298332|gb|AGB24152.1| AMP-forming long-chain acyl-CoA synthetase [Mycobacterium smegmatis
JS623]
Length = 598
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 117/376 (31%), Positives = 181/376 (48%), Gaps = 53/376 (14%)
Query: 62 ATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPA--ENGDKFLSMLPPWHVYERACGY 119
AT +YTSGTTG PKG LTH NL+++IR D PA + G++ L LP HV RA
Sbjct: 184 ATLIYTSGTTGRPKGCQLTHSNLMYEIRGAKDCFPALLDKGERMLVFLPLAHVLARAITL 243
Query: 120 FIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 178
F+ + L +T+ ++NL ++P ++SVP V+E +Y+ ++ + + +
Sbjct: 244 ACFANKVTLGFTSDIKNLVPTFGVFKPTLVVSVPRVFEKVYNTAEQN--ARNDGKGAIFE 301
Query: 179 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 238
+ + Y+ Q Q S L+ L H L ++LVY
Sbjct: 302 RAVNTAIEYS--------------QAQDSGGAGLL-----------LRAKHALFDRLVYG 336
Query: 239 KIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 297
K+++A+G + + +SGG L + FY +G+ + GYGLTE+S I R +GS
Sbjct: 337 KLRAALGGNCRGAISGGAPLGARLGHFYRGVGLTIYEGYGLTETSAAITVNRIDDVKVGS 396
Query: 298 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 357
VG + +++ D +E+L V+G V GY+ N T +A+ DGW +TG
Sbjct: 397 VGKLVPGNSMRLAD--DDELL---------VKGGVVFSGYWHNEEET-EAVFSDGWFHTG 444
Query: 358 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 417
D+G I G L + GR K+ IV + G+NV P LE+ LI Q + +
Sbjct: 445 DLGAIDDD----------GFLTIVGRKKEIIVTAGGKNVAPALLEDRLRAHPLISQAMCV 494
Query: 418 GQDQRRPGAIIVPDKE 433
G Q A+I D E
Sbjct: 495 GDAQPFIAALITIDPE 510
>gi|423687002|ref|ZP_17661810.1| long-chain-fatty-acid--CoA ligase family protein [Vibrio fischeri
SR5]
gi|371493761|gb|EHN69361.1| long-chain-fatty-acid--CoA ligase family protein [Vibrio fischeri
SR5]
Length = 612
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 127/428 (29%), Positives = 204/428 (47%), Gaps = 55/428 (12%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 118
+D+ T +YTSGTTG PKGVML ++N+ Q+ + D L LP HV+ERA
Sbjct: 186 NDLLTLIYTSGTTGEPKGVMLDYENIASQLEGHNTRLALTEQDVSLCFLPLSHVFERAWT 245
Query: 119 YFIFSRGIELMYTAVRNL-KDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 177
+++ +G Y NL K+ L +P M +VP YE ++S + +++ + A R+V+
Sbjct: 246 FYVLYKGATNCYLPNTNLIKEALTEVKPTVMCAVPRFYEKIFSTVHEKVSRAPAHRKVMF 305
Query: 178 RALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVY 237
+ + + ++ EG K+PS+ IL + +A+KLV
Sbjct: 306 TWAVNMGAKMSVCQQ--EG-------KEPSW---------------ILKQSYKVADKLVL 341
Query: 238 KKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLG 296
K++ +G + + GG L + I F+ A+GV V++GYG+TE++ I+
Sbjct: 342 SKLRMILGGNINFMPCGGAKLDVTIGRFFHALGVNVKLGYGMTETTATISCWEDGKFHPD 401
Query: 297 SVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNT 356
S+G + E+KI E +E+L VRG VM+GY+ P T+ EDG+L T
Sbjct: 402 SIGTLMPGAEVKI--GENSEIL---------VRGPMVMKGYYNKPEETESNFTEDGFLKT 450
Query: 357 GDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVV 416
GD G G L + R K+ + S G+ + P +E A + I QI V
Sbjct: 451 GDAGEF----------DADGNLYITDRIKELMKTSGGKYIAPQVIEGAIGKDHFIEQIAV 500
Query: 417 IGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLLYGELRKW 468
I ++ A+IVP + + AK L+I + D EL K EK ++ L EL ++
Sbjct: 501 IADTRKFVSALIVPCYDALEEYAKELNIAYHDRMELVKHSEIVEMLEKRVANLQKELARF 560
Query: 469 TSKCSFQI 476
F +
Sbjct: 561 EQVKKFTL 568
>gi|329946444|ref|ZP_08293987.1| AMP-binding enzyme, partial [Actinomyces sp. oral taxon 170 str.
F0386]
gi|328527266|gb|EGF54268.1| AMP-binding enzyme [Actinomyces sp. oral taxon 170 str. F0386]
Length = 563
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 122/406 (30%), Positives = 193/406 (47%), Gaps = 54/406 (13%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLL----HQIRSLYDIVPAENGDKFLSMLPPWHVYE 114
DD+ + +YTSGTTG PKGV LTH+N + H +R L ++ N + L LP HVY
Sbjct: 182 DDVYSIIYTSGTTGRPKGVRLTHRNAVGIPYHGVRYLPGVLWGGN-VRLLLFLPLAHVYA 240
Query: 115 RACGYFIFSRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 173
R + L +T V+ L DLQ + P Y+++VP V E +Y+ + +R
Sbjct: 241 RCLQLLSLAGEGVLGHTPDVKTLLPDLQSFAPSYVLAVPRVLEKIYNAADAK--AGGGSR 298
Query: 174 RVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAE 233
+ R +++ AY+ +G +R +Q H +A+
Sbjct: 299 LKLFRWAAKVAIAYSRALDTSDG--PSRRLRQA----------------------HAVAD 334
Query: 234 KLVYKKIQSAIGI-SKAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTC 292
+LV+++I++ +G ++ +SGGG L + FY +G+ + GYGLTE+ ++
Sbjct: 335 RLVFRRIRALMGPNARFIISGGGPLGQRLGHFYRGLGLVILEGYGLTETIGPVSVNTDWL 394
Query: 293 NVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDG 352
N +G+VG P+ EI+I E +E ++VRG V Y NP AT + DG
Sbjct: 395 NKIGTVGPPVCGNEIRI--GEDDE---------IQVRGLGVFSTYHNNPEATADSFTADG 443
Query: 353 WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIR 412
W TGDIG + G L + GR K+ IV + G+NV P +LE+ LI
Sbjct: 444 WFRTGDIGALDED----------GYLRITGRKKELIVTAGGKNVAPTQLEDRLRGHPLIS 493
Query: 413 QIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTI 458
Q++V+G + A+I DKE + + + D E S +
Sbjct: 494 QVLVVGDGEPFISALITLDKEMLPQWLRNHGLAAMDVVEASTHPQV 539
>gi|422536534|ref|ZP_16612441.1| AMP-binding enzyme [Propionibacterium acnes HL078PA1]
gi|315081416|gb|EFT53392.1| AMP-binding enzyme [Propionibacterium acnes HL078PA1]
gi|456739309|gb|EMF63876.1| long-chain-fatty-acid--CoA ligase/synthetase [Propionibacterium
acnes FZ1/2/0]
Length = 646
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 128/408 (31%), Positives = 200/408 (49%), Gaps = 59/408 (14%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSL---YDIVPAENGDKFLSMLPPWHVYER 115
DD+A +YTSGTTG PKGVM++H+ L ++++L +D+ PA D LS LP H E
Sbjct: 215 DDVAALIYTSGTTGEPKGVMISHRAALAELQALDAFFDVTPA---DHSLSFLPLSHALEW 271
Query: 116 ACGYFIFSRGIELMYTAVRNLKD---DLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAA 172
+ G + T V N K L +P +SVP +YE + S + ++ + S A
Sbjct: 272 GWSMAVIRHGC--LNTFVPNPKTISAMLAEVRPTLFVSVPKLYEQVMS-VAREKVSDSPA 328
Query: 173 RRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLA 232
+ + IRI E + + ++PS L AR H +A
Sbjct: 329 KLKIFEWSIRIG---------REWWQAEQEGRRPSVS------LRAR---------HGVA 364
Query: 233 EKLVYKKIQSAIGISKAGVSGGGS-LPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPT 291
++LV K I+ AIG K ++ GG+ L ++ F+ A G+ V GYGLTE+SP+++ P
Sbjct: 365 DRLVLKAIRDAIGGPKTVLAAGGAPLRKEVEEFFAACGLLVCQGYGLTEASPLVSFNSPG 424
Query: 292 CNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDED 351
G+ G P+ +++ E E+L RG VM+GY+K P AT A+ ED
Sbjct: 425 GYKFGTAGRPLVGSQMTTT--EDGEIL---------YRGPNVMKGYWKAPEATAAAI-ED 472
Query: 352 GWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLI 411
GWL+TGDIG I G LV+ R KD IV G+N+ P +E + ++ L
Sbjct: 473 GWLHTGDIGHIDED----------GFLVITDRLKDIIVTLNGKNISPQPIENSLMKDPLF 522
Query: 412 RQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTIS 459
V++G ++ ++ P +V A+RL I E+ + + ++
Sbjct: 523 EHAVLLGDNRPCLTLLVKPSLPQVEALAERLHITSMTGPEMLRSEELA 570
>gi|403737820|ref|ZP_10950548.1| long-chain-fatty-acid--CoA ligase FadD [Austwickia chelonae NBRC
105200]
gi|403191932|dbj|GAB77318.1| long-chain-fatty-acid--CoA ligase FadD [Austwickia chelonae NBRC
105200]
Length = 602
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 114/379 (30%), Positives = 185/379 (48%), Gaps = 50/379 (13%)
Query: 55 TIGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYE 114
T+G D +AT VYTSGTTG PKGV L+H N+L ++ ++ + G + + LP HV+E
Sbjct: 177 TMGHDTLATIVYTSGTTGEPKGVCLSHGNILAEVLAMKERFHLSPGLRSMCFLPLSHVFE 236
Query: 115 RACGYFIFSRGIELMY-TAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAAR 173
R+ + + G+E +Y T R + + + +P SVP +YE +Y+ +Q T +
Sbjct: 237 RSWTLVVLANGMENIYVTNPRTVAEAMVEIRPDAFCSVPRLYEKVYAVAHEQAGT--GVK 294
Query: 174 RVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAE 233
R V +R FA + +R + P++L+A + +A+
Sbjct: 295 RKVFDWAVRTGFATQSRRRA--------GKSVPAHLLA----------------ANAIAD 330
Query: 234 KLVYKKIQSAIGISKA-GVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTC 292
+LV +++ A+G K SGG + + F+ A ++V GYGLTE++P+++
Sbjct: 331 RLVLHRVRDAVGGPKRLMASGGAATRREVIEFFLAADLEVYEGYGLTETAPMVSCNSVGQ 390
Query: 293 NVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDG 352
+GSVG PI E++I D G + VRG V GY+ P T++ DG
Sbjct: 391 VRIGSVGRPIPRCEVRIAD-----------NGEILVRGPNVFNGYWHAPELTEEVFT-DG 438
Query: 353 WLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIR 412
W TGDIG + G L + R KD I+ + G+N+ P LE LI
Sbjct: 439 WFRTGDIGHLDE----------DGYLYVTDRLKDLIITAQGKNIAPAPLENHLSADPLIE 488
Query: 413 QIVVIGQDQRRPGAIIVPD 431
VV+G +++ A++ P+
Sbjct: 489 SAVVVGDNRKYLVALLQPN 507
>gi|335050302|ref|ZP_08543272.1| AMP-binding enzyme [Propionibacterium sp. 409-HC1]
gi|342211580|ref|ZP_08704305.1| AMP-binding enzyme [Propionibacterium sp. CC003-HC2]
gi|333769965|gb|EGL47044.1| AMP-binding enzyme [Propionibacterium sp. 409-HC1]
gi|340767124|gb|EGR89649.1| AMP-binding enzyme [Propionibacterium sp. CC003-HC2]
Length = 644
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 128/408 (31%), Positives = 200/408 (49%), Gaps = 59/408 (14%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSL---YDIVPAENGDKFLSMLPPWHVYER 115
DD+A +YTSGTTG PKGVM++H+ L ++++L +D+ PA D LS LP H E
Sbjct: 213 DDVAALIYTSGTTGEPKGVMISHRAALAELQALDAFFDVTPA---DHSLSFLPLSHALEW 269
Query: 116 ACGYFIFSRGIELMYTAVRNLKD---DLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAA 172
+ G + T V N K L +P +SVP +YE + S + ++ + S A
Sbjct: 270 GWSMAVIRHGC--LNTFVPNPKTISAMLAEVRPTLFVSVPKLYEQVMS-VAREKVSDSPA 326
Query: 173 RRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLA 232
+ + IRI E + + ++PS L AR H +A
Sbjct: 327 KLKIFEWSIRIG---------REWWQAEQEGRRPSVS------LRAR---------HGVA 362
Query: 233 EKLVYKKIQSAIGISKAGVSGGGS-LPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPT 291
++LV K I+ AIG K ++ GG+ L ++ F+ A G+ V GYGLTE+SP+++ P
Sbjct: 363 DRLVLKAIRDAIGGPKTVLAAGGAPLRKEVEEFFAACGLLVCQGYGLTEASPLVSFNSPG 422
Query: 292 CNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDED 351
G+ G P+ +++ E E+L RG VM+GY+K P AT A+ ED
Sbjct: 423 GYKFGTAGRPLVGSQMTTT--EDGEIL---------YRGPNVMKGYWKAPEATAAAI-ED 470
Query: 352 GWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLI 411
GWL+TGDIG I G LV+ R KD IV G+N+ P +E + ++ L
Sbjct: 471 GWLHTGDIGHIDED----------GFLVITDRLKDIIVTLNGKNISPQPIENSLMKDPLF 520
Query: 412 RQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTIS 459
V++G ++ ++ P +V A+RL I E+ + + ++
Sbjct: 521 EHAVLLGDNRPCLTLLVKPSLPQVEELAERLHITSMTGPEMLRSEELA 568
>gi|119776703|ref|YP_929443.1| AMP-binding family protein [Shewanella amazonensis SB2B]
gi|119769203|gb|ABM01774.1| AMP-binding family protein [Shewanella amazonensis SB2B]
Length = 597
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 123/401 (30%), Positives = 189/401 (47%), Gaps = 58/401 (14%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 118
DD+ T +YTSGTTG PKGVML H+ + IR + GD L+ LP H++ERA
Sbjct: 179 DDLLTLIYTSGTTGEPKGVMLPHRAIASTIRQHDKRLAFTEGDVSLAFLPLSHIFERAWS 238
Query: 119 YFIFSR-GIELMYTAVRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 177
+++ R G + T +K+ + +PH + VP E +YS +Q ++ + A+R+ +
Sbjct: 239 FYVLGRGGCNVYLTDTNRVKEAIAAVRPHTLCVVPRFLEKVYSAVQDKLSRAPASRKAL- 297
Query: 178 RALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVY 237
++A + R +E + + + + L++ L AR LA+KLV
Sbjct: 298 -----FAWAMSVGGRRFE---VAQGRAKGGVLLS----LQAR-----------LADKLVG 334
Query: 238 KKIQSAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVL- 295
+KI+ +G K GG +L + F+ A+ V V GYGLTE++ + TCN L
Sbjct: 335 RKIRDVLGGRLKFMPCGGAALNTDVGAFFNAVNVPVLCGYGLTETTATV-----TCNTLD 389
Query: 296 ----GSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDED 351
GS G + EI+I E +E+L VRG VM GY+K P T A D +
Sbjct: 390 NRVPGSNGQCLPEVEIRI--GENDEIL---------VRGDTVMTGYYKRPEDTASAFD-N 437
Query: 352 GWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLI 411
GW TGD G + G L + R K+ + S G+ + P +E R I
Sbjct: 438 GWFKTGDAGRLDE----------AGNLFITDRIKELMKTSNGKYIAPQRVEGVVGRCPFI 487
Query: 412 RQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASEL 452
Q+ VI + A+IVP E + A+ + + EL
Sbjct: 488 EQVAVIADARNYVTALIVPAYEALEAWAREKGLKYESPLEL 528
>gi|197334906|ref|YP_002157059.1| long-chain-fatty-acid--CoA ligase family protein [Vibrio fischeri
MJ11]
gi|197316396|gb|ACH65843.1| putative long-chain-fatty-acid--CoA ligase family protein [Vibrio
fischeri MJ11]
Length = 612
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 127/428 (29%), Positives = 204/428 (47%), Gaps = 55/428 (12%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACG 118
+D+ T +YTSGTTG PKGVML ++N+ Q+ + D L LP HV+ERA
Sbjct: 186 NDLLTLIYTSGTTGEPKGVMLDYENIASQLEGHNTRLALTEQDVSLCFLPLSHVFERAWT 245
Query: 119 YFIFSRGIELMYTAVRNL-KDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVA 177
+++ +G Y NL K+ L +P M +VP YE ++S + +++ + A R+V+
Sbjct: 246 FYVLYKGATNCYLPNTNLIKEALTEVKPTVMCAVPRFYEKIFSTVHEKVSRAPAHRKVMF 305
Query: 178 RALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVY 237
+ + + ++ EG K+PS+ IL + +A+KLV
Sbjct: 306 TWAVNMGAKMSVCQQ--EG-------KEPSW---------------ILKQSYKVADKLVL 341
Query: 238 KKIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLG 296
K++ +G + + GG L + I F+ A+GV V++GYG+TE++ I+
Sbjct: 342 SKLRMILGGNINFMPCGGAKLDVTIGRFFHALGVNVKLGYGMTETTATISCWEDGKFHPD 401
Query: 297 SVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNT 356
S+G + E+KI E +E+L VRG VM+GY+ P T+ EDG+L T
Sbjct: 402 SIGTLMPGAEVKI--GENSEIL---------VRGPMVMKGYYNKPEETESNFTEDGFLKT 450
Query: 357 GDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVV 416
GD G G L + R K+ + S G+ + P +E A + I QI V
Sbjct: 451 GDAGEF----------DADGNLYITDRIKELMKTSGGKYIAPQVIEGAIGKDHFIEQIAV 500
Query: 417 IGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSK--------EKTISLLYGELRKW 468
I ++ A+IVP + + AK L+I + D EL K EK ++ L EL ++
Sbjct: 501 IADTRKFVSALIVPCYDALEEYAKELNIAYHDRMELVKHSEIVEMLEKRVANLQKELARF 560
Query: 469 TSKCSFQI 476
F +
Sbjct: 561 EQVKKFTL 568
>gi|386823131|ref|ZP_10110286.1| long-chain-fatty-acid--CoA ligase [Serratia plymuthica PRI-2C]
gi|386379918|gb|EIJ20700.1| long-chain-fatty-acid--CoA ligase [Serratia plymuthica PRI-2C]
Length = 602
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 119/405 (29%), Positives = 191/405 (47%), Gaps = 47/405 (11%)
Query: 60 DIATYVYTSGTTGNPKGVMLTHKNLLHQIRSLYDIVPAENGDKFLSMLPPWHVYERACGY 119
D+ T +YTSGTTG PKGVML ++NL Q+ + + D LS LP HV+ER +
Sbjct: 182 DLFTLIYTSGTTGEPKGVMLDYRNLAAQLYLHDERLTVNEEDVSLSFLPISHVFERIWSF 241
Query: 120 FIFSRGIELMYTAVRN-LKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVAR 178
FI G + +Y + +++ + +P M +VP YE ++S + +++ + RR +
Sbjct: 242 FIMHSGAQNVYLPNTDWVREAMTAVRPTLMCAVPRFYEKIFSAVHEKVARAPWLRRAL-- 299
Query: 179 ALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYK 238
+A +R F R K L +L H A+KLV
Sbjct: 300 ----FHWAIVCGER---KFLQERAGKPLGKLFSLS---------------HRWADKLVLS 337
Query: 239 KIQSAIGISKAGV-SGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGS 297
K++ +G + + G L ++ LF++A+GV ++ GYG+TE+ ++ GS
Sbjct: 338 KLRGILGGRVRFLPAAGAKLDDNVILFFQAMGVNIKYGYGMTETCATVSCWEEGNFRFGS 397
Query: 298 VGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTG 357
+G P+ E++I AE NE ++VRG VM+GYF P T + DGWL TG
Sbjct: 398 IGKPLPGVEVRI--AEENE---------IQVRGPIVMRGYFNKPLETAASFTGDGWLKTG 446
Query: 358 DIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVI 417
D G I G L + R KD + S G+ + P LE + I Q+ +I
Sbjct: 447 DAGAIDE----------AGNLFITERLKDLMKTSGGKYIAPQMLEGTLAQDRFIEQVAII 496
Query: 418 GQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTISLLY 462
++ A+IVP E + AK +++ + D EL + I ++
Sbjct: 497 ADARKFVSALIVPSFESLEEYAKSINLKYQDRLELLRNSHIIEMF 541
>gi|427390334|ref|ZP_18884740.1| hypothetical protein HMPREF9233_00243 [Actinobaculum massiliae
ACS-171-V-Col2]
gi|425733349|gb|EKU96155.1| hypothetical protein HMPREF9233_00243 [Actinobaculum massiliae
ACS-171-V-Col2]
Length = 602
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 127/435 (29%), Positives = 203/435 (46%), Gaps = 66/435 (15%)
Query: 11 KSSVAPDIVE-----EIPVFSYDEIIDLGRESRKAFSDSNDARKHYKYETIGSDDIATYV 65
+S+VAP + E EI V +++ L + DAR + I +DD+AT +
Sbjct: 132 RSTVAPALEEFEHFKEIFVIEANDLDRLATRGGRELDAQIDART----DAIRADDLATII 187
Query: 66 YTSGTTGNPKGVMLTHKNLLHQIRS---LYDIVPAENGDKFLSMLPPWHVYERACGYFIF 122
YTSGTTG KGV LTH+NLLH + ++ P G + + LP H + R
Sbjct: 188 YTSGTTGRSKGVQLTHRNLLHVAMNGPLDENLAPILTGKRTILFLPMAHSFARFINLVAL 247
Query: 123 SRGIELMYTA-VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAARRVVARALI 181
+G + Y +NL D+Q ++P Y+++VP V+E +Y+ + S+ ++ + R
Sbjct: 248 YQGEVIAYAPDTKNLIADIQSFKPEYVLAVPRVFEKIYNAADAK---SAGPKQKIFRYYA 304
Query: 182 RISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLAEKLVYKKIQ 241
+++ AY+ R + + PS + L H + ++LVY ++
Sbjct: 305 KVAIAYS---RALD------TEAGPSLPLRL---------------SHAVGDRLVYSTLR 340
Query: 242 SAIGIS-KAGVSGGGSLPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPTCNVLGSVG- 299
+G K +SGG L + F+ IG+ V GYG TE+S R +GSVG
Sbjct: 341 DLLGGELKYAISGGAPLGERLGHFFRGIGITVLEGYGTTETSAPTTVNRIGHQKIGSVGP 400
Query: 300 -HPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDEDGWLNTGD 358
+P H DA+ G + V+G V GY + +A++++ EDGW TGD
Sbjct: 401 AYPGCHVA---TDAD----------GEILVKGDHVFTGYVGDDAASRESFTEDGWFRTGD 447
Query: 359 IGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLIRQIVVIG 418
IG I G + + GR K+ IV + G+NV P +LE+ L+ Q+VV+G
Sbjct: 448 IGHIDED----------GFIWITGRKKELIVTAGGKNVAPAQLEDKLRGHPLVSQVVVVG 497
Query: 419 QDQRRPGAIIVPDKE 433
+ A+ D E
Sbjct: 498 DQKPFISAVFTLDAE 512
>gi|422430433|ref|ZP_16507314.1| AMP-binding enzyme [Propionibacterium acnes HL072PA2]
gi|422533384|ref|ZP_16609322.1| AMP-binding enzyme [Propionibacterium acnes HL072PA1]
gi|314979072|gb|EFT23166.1| AMP-binding enzyme [Propionibacterium acnes HL072PA2]
gi|315089618|gb|EFT61594.1| AMP-binding enzyme [Propionibacterium acnes HL072PA1]
Length = 646
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 128/408 (31%), Positives = 200/408 (49%), Gaps = 59/408 (14%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSL---YDIVPAENGDKFLSMLPPWHVYER 115
DD+A +YTSGTTG PKGVM++H+ L ++++L +D+ PA D LS LP H E
Sbjct: 215 DDVAALIYTSGTTGEPKGVMISHRAALAELQALDAFFDVTPA---DHSLSFLPLSHALEW 271
Query: 116 ACGYFIFSRGIELMYTAVRNLKD---DLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAA 172
+ G + T V N K L +P +SVP +YE + S + ++ + S A
Sbjct: 272 GWSMAVIRHGC--LNTFVPNPKTISAMLAEVRPTLFVSVPKLYEQVMS-VAREKVSDSPA 328
Query: 173 RRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLA 232
+ + IRI E + + ++PS L AR H +A
Sbjct: 329 KLKIFEWSIRIG---------REWWQAEQEGRRPSVS------LRAR---------HGVA 364
Query: 233 EKLVYKKIQSAIGISKAGVSGGGS-LPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPT 291
++LV K I+ AIG K ++ GG+ L ++ F+ A G+ V GYGLTE+SP+++ P
Sbjct: 365 DRLVLKAIRDAIGGPKTVLAAGGAPLRKEVEEFFAACGLLVCQGYGLTEASPLVSFNSPG 424
Query: 292 CNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDED 351
G+ G P+ +++ E E+L RG VM+GY+K P AT A+ ED
Sbjct: 425 GYKFGTAGRPLVGSQMTTT--EDGEIL---------YRGPNVMKGYWKAPEATAAAI-ED 472
Query: 352 GWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLI 411
GWL+TGDIG I G LV+ R KD IV G+N+ P +E + ++ L
Sbjct: 473 GWLHTGDIGHIDED----------GFLVITDRLKDIIVTLNGKNISPQPIENSLMKDPLF 522
Query: 412 RQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTIS 459
V++G ++ ++ P +V A+RL I E+ + + ++
Sbjct: 523 EHAVLLGDNRPCLTLLVKPSLPQVEELAERLHITSMTGPEMLRSEELA 570
>gi|422548906|ref|ZP_16624714.1| AMP-binding enzyme [Propionibacterium acnes HL050PA1]
gi|314919015|gb|EFS82846.1| AMP-binding enzyme [Propionibacterium acnes HL050PA1]
Length = 646
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 128/408 (31%), Positives = 200/408 (49%), Gaps = 59/408 (14%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSL---YDIVPAENGDKFLSMLPPWHVYER 115
DD+A +YTSGTTG PKGVM++H+ L ++++L +D+ PA D LS LP H E
Sbjct: 215 DDVAALIYTSGTTGEPKGVMISHRAALAELQALDAFFDVTPA---DHSLSFLPLSHALEW 271
Query: 116 ACGYFIFSRGIELMYTAVRNLKD---DLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAA 172
+ G + T V N K L +P +SVP +YE + S + ++ + S A
Sbjct: 272 GWSMAVIRHGC--LNTFVPNPKTISAMLAEVRPTLFVSVPKLYEQVMS-VAREKVSDSPA 328
Query: 173 RRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLA 232
+ + IRI E + + ++PS L AR H +A
Sbjct: 329 KLKIFEWSIRIG---------REWWQAEQEGRRPSVS------LRAR---------HGVA 364
Query: 233 EKLVYKKIQSAIGISKAGVSGGGS-LPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPT 291
++LV K I+ AIG K ++ GG+ L ++ F+ A G+ V GYGLTE+SP+++ P
Sbjct: 365 DRLVLKAIRDAIGGPKTVLAAGGAPLRKEVEEFFAACGLLVCQGYGLTEASPLVSFNSPG 424
Query: 292 CNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDED 351
G+ G P+ +++ E E+L RG VM+GY+K P AT A+ ED
Sbjct: 425 GYKFGTAGRPLVGSQMTTT--EDGEIL---------YRGPNVMKGYWKAPEATAAAI-ED 472
Query: 352 GWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLI 411
GWL+TGDIG I G LV+ R KD IV G+N+ P +E + ++ L
Sbjct: 473 GWLHTGDIGHIDED----------GFLVITDRLKDIIVTLNGKNISPQPIENSLMKDPLF 522
Query: 412 RQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTIS 459
V++G ++ ++ P +V A+RL I E+ + + ++
Sbjct: 523 EHAVLLGDNRPCLTLLVKPSLPQVEELAERLHITSMTGPEMLRSEELA 570
>gi|432089699|gb|ELK23519.1| Long-chain-fatty-acid--CoA ligase 1 [Myotis davidii]
Length = 706
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 132/447 (29%), Positives = 203/447 (45%), Gaps = 67/447 (14%)
Query: 1 MRFIILLWGKKSSVAPDIVEE-----IPVFSYDEIIDLGRESRKAFSDSNDARKHYKYET 55
++ ++L+ S D+VE + + S + DLGR +RK K +
Sbjct: 221 LKVVVLM----DSYGSDLVERGKKCGVEITSMKAMEDLGRANRK------------KPKP 264
Query: 56 IGSDDIATYVYTSGTTGNPKGVMLTHKNLLHQ----IRSLYDIVPAENGDKFLSMLPPWH 111
+D+A +TSGTTGNPKG M+TH+N++ ++ +IV D +S LP H
Sbjct: 265 PAPEDLAVICFTSGTTGNPKGAMITHRNIVSDASGFVKVTENIVSPTPDDTLISFLPLAH 324
Query: 112 VYERACGYFIFSRGIELMYTA--VRNLKDDLQRYQPHYMISVPLVYETLYSGIQKQIFTS 169
++ER + G ++ + +R L DDL+ QP T++ + +
Sbjct: 325 MFERVVECVMLCHGAKIGFFQGDIRLLMDDLKVLQP-----------TIFP-VPEAXXXX 372
Query: 170 SAARRVVARALIRI-SFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPL 228
R RI A T KR F R + + + + LW
Sbjct: 373 XXXXXXXXRMFDRIFGQANTTLKRWLLDFASKRKEAELRSCIIRNNSLW----------- 421
Query: 229 HLLAEKLVYKKIQSAIGISKAGVSGGGSLPMHIDLFYE-AIGVKVQVGYGLTESSPVIAA 287
+KL+++KIQ A G++ V+G + + F A+G + GYG TE + +
Sbjct: 422 ----DKLIFRKIQVADGLTVIXVTGAAPVSATVLTFLRAALGCQFYEGYGQTECTAGCSL 477
Query: 288 RRPTCNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQA 347
P G VG P+ IK+VD E L A +G V V+G V QGY K+P+ T +A
Sbjct: 478 TIPGDWTAGHVGAPMPCNLIKLVDVEEMNYLAAKGEGEVCVKGPNVFQGYLKDPAKTAEA 537
Query: 348 LDEDGWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALR 407
LD+DGWL+TGDIG P+ G L + R K L+ GE + P ++E LR
Sbjct: 538 LDKDGWLHTGDIGKWLPN----------GALKIIDRKKHIFKLAQGEYIAPEKIENIYLR 587
Query: 408 SSLIRQIVVIGQD-QRRPGAIIVPDKE 433
S + Q+ V G+ Q A++VPD E
Sbjct: 588 SEPVAQVFVHGESLQAFLVAVVVPDVE 614
>gi|422486485|ref|ZP_16562831.1| AMP-binding enzyme [Propionibacterium acnes HL013PA2]
gi|327450368|gb|EGE97022.1| AMP-binding enzyme [Propionibacterium acnes HL013PA2]
Length = 646
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 128/408 (31%), Positives = 200/408 (49%), Gaps = 59/408 (14%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSL---YDIVPAENGDKFLSMLPPWHVYER 115
DD+A +YTSGTTG PKGVM++H+ L ++++L +D+ PA D LS LP H E
Sbjct: 215 DDVAALIYTSGTTGEPKGVMISHRAALAELQALDAFFDVTPA---DHSLSFLPLSHALEW 271
Query: 116 ACGYFIFSRGIELMYTAVRNLKD---DLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAA 172
+ G + T V N K L +P +SVP +YE + S + ++ + S A
Sbjct: 272 GWSMAVIRHGC--LNTFVPNPKTISAMLAEVRPTLFVSVPKLYEQVMS-VAREKVSDSPA 328
Query: 173 RRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLA 232
+ + IRI E + + ++PS L AR H +A
Sbjct: 329 KLKIFEWSIRIG---------REWWQAEQEGRRPSVS------LRAR---------HGVA 364
Query: 233 EKLVYKKIQSAIGISKAGVSGGGS-LPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPT 291
++LV K I+ AIG K ++ GG+ L ++ F+ A G+ V GYGLTE+SP+++ P
Sbjct: 365 DRLVLKAIRDAIGGPKTVLAAGGAPLRKEVEEFFAACGLLVCQGYGLTEASPLVSFNSPG 424
Query: 292 CNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDED 351
G+ G P+ +++ E E+L RG VM+GY+K P AT A+ ED
Sbjct: 425 GYKFGTAGRPLVGSQMTTT--EDGEIL---------YRGPNVMKGYWKAPEATAAAI-ED 472
Query: 352 GWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLI 411
GWL+TGDIG I G LV+ R KD IV G+N+ P +E + ++ L
Sbjct: 473 GWLHTGDIGHIDED----------GFLVITDRLKDIIVTLNGKNISPQPIENSLMKDPLF 522
Query: 412 RQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTIS 459
V++G ++ ++ P +V A+RL I E+ + + ++
Sbjct: 523 EHAVLLGNNRPCLTLLVKPSLPQVEELAERLHITSMTGPEMLRSEELA 570
>gi|335055097|ref|ZP_08547887.1| AMP-binding enzyme [Propionibacterium sp. 434-HC2]
gi|365963859|ref|YP_004945425.1| long-chain-fatty-acid--CoA ligase/synthetase [Propionibacterium
acnes TypeIA2 P.acn31]
gi|365966099|ref|YP_004947664.1| long-chain-fatty-acid--CoA ligase/synthetase [Propionibacterium
acnes TypeIA2 P.acn17]
gi|387504596|ref|YP_005945825.1| putative long-chain-fatty-acid--CoA ligase/synthetase
[Propionibacterium acnes 6609]
gi|407936605|ref|YP_006852247.1| long-chain-fatty-acid--CoA ligase/synthetase [Propionibacterium
acnes C1]
gi|422383826|ref|ZP_16463967.1| AMP-binding family protein [Propionibacterium acnes HL096PA3]
gi|422426562|ref|ZP_16503482.1| AMP-binding enzyme [Propionibacterium acnes HL087PA1]
gi|422431738|ref|ZP_16508609.1| AMP-binding enzyme [Propionibacterium acnes HL059PA2]
gi|422434480|ref|ZP_16511338.1| AMP-binding enzyme [Propionibacterium acnes HL083PA2]
gi|422442966|ref|ZP_16519767.1| AMP-binding enzyme [Propionibacterium acnes HL002PA1]
gi|422445214|ref|ZP_16521967.1| AMP-binding enzyme [Propionibacterium acnes HL027PA1]
gi|422448125|ref|ZP_16524857.1| AMP-binding enzyme [Propionibacterium acnes HL036PA3]
gi|422449813|ref|ZP_16526534.1| AMP-binding enzyme [Propionibacterium acnes HL030PA2]
gi|422452652|ref|ZP_16529349.1| AMP-binding enzyme [Propionibacterium acnes HL087PA3]
gi|422455623|ref|ZP_16532293.1| AMP-binding enzyme [Propionibacterium acnes HL030PA1]
gi|422479039|ref|ZP_16555450.1| AMP-binding enzyme [Propionibacterium acnes HL063PA1]
gi|422482169|ref|ZP_16558568.1| AMP-binding enzyme [Propionibacterium acnes HL036PA1]
gi|422489693|ref|ZP_16566020.1| AMP-binding enzyme [Propionibacterium acnes HL020PA1]
gi|422496633|ref|ZP_16572915.1| AMP-binding enzyme [Propionibacterium acnes HL002PA3]
gi|422499723|ref|ZP_16575981.1| AMP-binding enzyme [Propionibacterium acnes HL063PA2]
gi|422501800|ref|ZP_16578049.1| AMP-binding enzyme [Propionibacterium acnes HL027PA2]
gi|422505286|ref|ZP_16581517.1| AMP-binding enzyme [Propionibacterium acnes HL036PA2]
gi|422507577|ref|ZP_16583759.1| AMP-binding enzyme [Propionibacterium acnes HL046PA2]
gi|422509591|ref|ZP_16585747.1| AMP-binding enzyme [Propionibacterium acnes HL059PA1]
gi|422512267|ref|ZP_16588400.1| AMP-binding enzyme [Propionibacterium acnes HL087PA2]
gi|422538955|ref|ZP_16614829.1| AMP-binding enzyme [Propionibacterium acnes HL013PA1]
gi|422541835|ref|ZP_16617691.1| AMP-binding enzyme [Propionibacterium acnes HL037PA1]
gi|422546754|ref|ZP_16622578.1| AMP-binding enzyme [Propionibacterium acnes HL050PA3]
gi|422552786|ref|ZP_16628574.1| AMP-binding enzyme [Propionibacterium acnes HL005PA3]
gi|422556133|ref|ZP_16631892.1| AMP-binding enzyme [Propionibacterium acnes HL005PA2]
gi|422556623|ref|ZP_16632375.1| AMP-binding enzyme [Propionibacterium acnes HL025PA2]
gi|422561513|ref|ZP_16637198.1| AMP-binding enzyme [Propionibacterium acnes HL046PA1]
gi|422567888|ref|ZP_16643513.1| AMP-binding enzyme [Propionibacterium acnes HL002PA2]
gi|422569205|ref|ZP_16644820.1| AMP-binding enzyme [Propionibacterium acnes HL067PA1]
gi|422577342|ref|ZP_16652876.1| AMP-binding enzyme [Propionibacterium acnes HL005PA4]
gi|313765156|gb|EFS36520.1| AMP-binding enzyme [Propionibacterium acnes HL013PA1]
gi|313808590|gb|EFS47050.1| AMP-binding enzyme [Propionibacterium acnes HL087PA2]
gi|313817120|gb|EFS54834.1| AMP-binding enzyme [Propionibacterium acnes HL059PA1]
gi|313819065|gb|EFS56779.1| AMP-binding enzyme [Propionibacterium acnes HL046PA2]
gi|313821657|gb|EFS59371.1| AMP-binding enzyme [Propionibacterium acnes HL036PA1]
gi|313823792|gb|EFS61506.1| AMP-binding enzyme [Propionibacterium acnes HL036PA2]
gi|313826896|gb|EFS64610.1| AMP-binding enzyme [Propionibacterium acnes HL063PA1]
gi|313829267|gb|EFS66981.1| AMP-binding enzyme [Propionibacterium acnes HL063PA2]
gi|314916839|gb|EFS80670.1| AMP-binding enzyme [Propionibacterium acnes HL005PA4]
gi|314921153|gb|EFS84984.1| AMP-binding enzyme [Propionibacterium acnes HL050PA3]
gi|314926132|gb|EFS89963.1| AMP-binding enzyme [Propionibacterium acnes HL036PA3]
gi|314932500|gb|EFS96331.1| AMP-binding enzyme [Propionibacterium acnes HL067PA1]
gi|314956271|gb|EFT00643.1| AMP-binding enzyme [Propionibacterium acnes HL027PA1]
gi|314958768|gb|EFT02870.1| AMP-binding enzyme [Propionibacterium acnes HL002PA1]
gi|314960972|gb|EFT05073.1| AMP-binding enzyme [Propionibacterium acnes HL002PA2]
gi|314968795|gb|EFT12893.1| AMP-binding enzyme [Propionibacterium acnes HL037PA1]
gi|314985948|gb|EFT30040.1| AMP-binding enzyme [Propionibacterium acnes HL005PA2]
gi|314989257|gb|EFT33348.1| AMP-binding enzyme [Propionibacterium acnes HL005PA3]
gi|315084943|gb|EFT56919.1| AMP-binding enzyme [Propionibacterium acnes HL027PA2]
gi|315087473|gb|EFT59449.1| AMP-binding enzyme [Propionibacterium acnes HL002PA3]
gi|315100054|gb|EFT72030.1| AMP-binding enzyme [Propionibacterium acnes HL059PA2]
gi|315102786|gb|EFT74762.1| AMP-binding enzyme [Propionibacterium acnes HL046PA1]
gi|315107340|gb|EFT79316.1| AMP-binding enzyme [Propionibacterium acnes HL030PA1]
gi|315110512|gb|EFT82488.1| AMP-binding enzyme [Propionibacterium acnes HL030PA2]
gi|327333995|gb|EGE75710.1| AMP-binding family protein [Propionibacterium acnes HL096PA3]
gi|327455527|gb|EGF02182.1| AMP-binding enzyme [Propionibacterium acnes HL087PA3]
gi|327456182|gb|EGF02837.1| AMP-binding enzyme [Propionibacterium acnes HL083PA2]
gi|328756809|gb|EGF70425.1| AMP-binding enzyme [Propionibacterium acnes HL087PA1]
gi|328757697|gb|EGF71313.1| AMP-binding enzyme [Propionibacterium acnes HL020PA1]
gi|328759092|gb|EGF72708.1| AMP-binding enzyme [Propionibacterium acnes HL025PA2]
gi|333762704|gb|EGL40190.1| AMP-binding enzyme [Propionibacterium sp. 434-HC2]
gi|335278641|gb|AEH30546.1| putative long-chain-fatty-acid--CoA ligase/synthetase
[Propionibacterium acnes 6609]
gi|365740540|gb|AEW84742.1| long-chain-fatty-acid--CoA ligase/synthetase [Propionibacterium
acnes TypeIA2 P.acn31]
gi|365742780|gb|AEW82474.1| long-chain-fatty-acid--CoA ligase/synthetase [Propionibacterium
acnes TypeIA2 P.acn17]
gi|407905186|gb|AFU42016.1| putative long-chain-fatty-acid--CoA ligase/synthetase
[Propionibacterium acnes C1]
Length = 646
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 128/408 (31%), Positives = 200/408 (49%), Gaps = 59/408 (14%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSL---YDIVPAENGDKFLSMLPPWHVYER 115
DD+A +YTSGTTG PKGVM++H+ L ++++L +D+ PA D LS LP H E
Sbjct: 215 DDVAALIYTSGTTGEPKGVMISHRAALAELQALDAFFDVTPA---DHSLSFLPLSHALEW 271
Query: 116 ACGYFIFSRGIELMYTAVRNLKD---DLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAA 172
+ G + T V N K L +P +SVP +YE + S + ++ + S A
Sbjct: 272 GWSMAVIRHGC--LNTFVPNPKTISAMLAEVRPTLFVSVPKLYEQVMS-VAREKVSDSPA 328
Query: 173 RRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLA 232
+ + IRI E + + ++PS L AR H +A
Sbjct: 329 KLKIFEWSIRIG---------REWWQAEQEGRRPSVS------LRAR---------HGVA 364
Query: 233 EKLVYKKIQSAIGISKAGVSGGGS-LPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPT 291
++LV K I+ AIG K ++ GG+ L ++ F+ A G+ V GYGLTE+SP+++ P
Sbjct: 365 DRLVLKAIRDAIGGPKTVLAAGGAPLRKEVEEFFAACGLLVCQGYGLTEASPLVSFNSPG 424
Query: 292 CNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDED 351
G+ G P+ +++ E E+L RG VM+GY+K P AT A+ ED
Sbjct: 425 GYKFGTAGRPLVGSQMTTT--EDGEIL---------YRGPNVMKGYWKAPEATAAAI-ED 472
Query: 352 GWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLI 411
GWL+TGDIG I G LV+ R KD IV G+N+ P +E + ++ L
Sbjct: 473 GWLHTGDIGHIDED----------GFLVITDRLKDIIVTLNGKNISPQPIENSLMKDPLF 522
Query: 412 RQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTIS 459
V++G ++ ++ P +V A+RL I E+ + + ++
Sbjct: 523 EHAVLLGDNRPCLTLLVKPSLPQVEELAERLHITSMTGPEMLRSEELA 570
>gi|422494783|ref|ZP_16571078.1| AMP-binding enzyme [Propionibacterium acnes HL025PA1]
gi|313813943|gb|EFS51657.1| AMP-binding enzyme [Propionibacterium acnes HL025PA1]
Length = 646
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 128/408 (31%), Positives = 200/408 (49%), Gaps = 59/408 (14%)
Query: 59 DDIATYVYTSGTTGNPKGVMLTHKNLLHQIRSL---YDIVPAENGDKFLSMLPPWHVYER 115
DD+A +YTSGTTG PKGVM++H+ L ++++L +D+ PA D LS LP H E
Sbjct: 215 DDVAALIYTSGTTGEPKGVMISHRAALAELQALDAFFDVTPA---DHSLSFLPLSHALEW 271
Query: 116 ACGYFIFSRGIELMYTAVRNLKD---DLQRYQPHYMISVPLVYETLYSGIQKQIFTSSAA 172
+ G + T V N K L +P +SVP +YE + S + ++ + S A
Sbjct: 272 GWSMAVIRHGC--LNTFVPNPKTISAMLAEVRPTLFVSVPKLYEQVMS-VAREKVSDSPA 328
Query: 173 RRVVARALIRISFAYTAFKRIYEGFCLTRNQKQPSYLVALIDWLWARIICAILWPLHLLA 232
+ + IRI E + + ++PS L AR H +A
Sbjct: 329 KLKIFEWSIRIG---------REWWQAEQEGRRPSVS------LRAR---------HGVA 364
Query: 233 EKLVYKKIQSAIGISKAGVSGGGS-LPMHIDLFYEAIGVKVQVGYGLTESSPVIAARRPT 291
++LV K I+ AIG K ++ GG+ L ++ F+ A G+ V GYGLTE+SP+++ P
Sbjct: 365 DRLVLKAIRDAIGGPKTVLAAGGAPLRKEVEEFFAACGLLVCQGYGLTEASPLVSFNSPG 424
Query: 292 CNVLGSVGHPINHTEIKIVDAETNEVLPAGSKGIVKVRGSQVMQGYFKNPSATKQALDED 351
G+ G P+ +++ E E+L RG VM+GY+K P AT A+ ED
Sbjct: 425 GYKFGTAGRPLVGSQMTTT--EDGEIL---------YRGPNVMKGYWKAPEATAAAI-ED 472
Query: 352 GWLNTGDIGWIAPHHSRGRSRRCGGVLVLEGRAKDTIVLSTGENVEPLELEEAALRSSLI 411
GWL+TGDIG I G LV+ R KD IV G+N+ P +E + ++ L
Sbjct: 473 GWLHTGDIGHIDED----------GFLVITDRLKDIIVTLNGKNISPQPIENSLMKDPLF 522
Query: 412 RQIVVIGQDQRRPGAIIVPDKEEVLMAAKRLSIVHADASELSKEKTIS 459
V++G ++ ++ P +V A+RL I E+ + + ++
Sbjct: 523 EHAVLLGDNRPCLTLLVKPSLPQVEELAERLHITSMTGPEMLRSEELA 570
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.138 0.411
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,810,005,404
Number of Sequences: 23463169
Number of extensions: 332055329
Number of successful extensions: 916140
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 26604
Number of HSP's successfully gapped in prelim test: 17707
Number of HSP's that attempted gapping in prelim test: 788285
Number of HSP's gapped (non-prelim): 100499
length of query: 495
length of database: 8,064,228,071
effective HSP length: 147
effective length of query: 348
effective length of database: 8,910,109,524
effective search space: 3100718114352
effective search space used: 3100718114352
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 79 (35.0 bits)