Your job contains 1 sequence.
>011012
MAMDFDDFLHLDFSGYSSTTTTTTTGDDYACNWNDWSPVVDWEALSGGQDDFHDLIESMM
DDSGLNPNARVANIAHEPCNSVSTETSSSSMAVDEETNGEDFKGLRLVHLLMAAAEALTG
VNKSRELAQVILIRLKELVSPNDGSNMERLAAYFTDALQGLLEGAGGVHGNNKHYTSNGP
HHRDDHHHTDVLAAFQLLQDMSPYVKFGHFTANQAILEAVANDRRVHIVDYDIMEGIQWA
SLMQALVSRKDGPPAPHLRITALSRGGSGRRSISTVQETGRRLVAFAASIGQPFSFHQCR
LDSDETFKASALKLVRGEALIINCMLHLPHFSYRAPDSIASFLSGAKTLNPRLVTLVEEE
TGPIGDGGFVSRFMDSLHHYSAVYDSLEAGFPMQSRARALVERVFLGPRISGSLARIYRT
CGEEEVYSWGDWLGVVGFKPVNISFANHCQAKLLLGLFNDGYRVEELANNRLVLGWKSRR
LLSASVWTSSFDSNL
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 011012
(495 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2132482 - symbol:AT4G08250 "AT4G08250" species... 1255 7.6e-128 1
TAIR|locus:2080345 - symbol:SCR "SCARECROW" species:3702 ... 539 5.6e-52 1
TAIR|locus:2020487 - symbol:LAS "AT1G55580" species:3702 ... 468 7.7e-48 2
TAIR|locus:2165685 - symbol:AT5G41920 "AT5G41920" species... 480 1.0e-45 1
TAIR|locus:2099624 - symbol:RGL2 "RGA-like 2" species:370... 472 7.1e-45 1
TAIR|locus:2157477 - symbol:RGL3 "RGA-like protein 3" spe... 456 3.5e-43 1
TAIR|locus:2201557 - symbol:RGL1 "RGA-like 1" species:370... 449 1.9e-42 1
TAIR|locus:2005516 - symbol:RGA1 "REPRESSOR OF GA1-3 1" s... 437 3.6e-41 1
TAIR|locus:2174974 - symbol:AT5G66770 "AT5G66770" species... 432 1.2e-40 1
TAIR|locus:2164783 - symbol:PAT1 "AT5G48150" species:3702... 421 1.8e-39 1
TAIR|locus:2101694 - symbol:AT3G50650 "AT3G50650" species... 416 6.1e-39 1
TAIR|locus:2008076 - symbol:SCL5 "AT1G50600" species:3702... 413 1.4e-38 1
TAIR|locus:2006747 - symbol:GAI "GIBBERELLIC ACID INSENSI... 404 1.1e-37 1
TAIR|locus:2008086 - symbol:SCL3 "AT1G50420" species:3702... 266 3.0e-35 2
TAIR|locus:2044973 - symbol:SCL21 "AT2G04890" species:370... 376 1.1e-34 1
TAIR|locus:2015243 - symbol:AT1G63100 "AT1G63100" species... 365 7.6e-33 1
TAIR|locus:2101801 - symbol:HAM2 "AT3G60630" species:3702... 344 2.4e-30 1
TAIR|locus:2026982 - symbol:SCL1 "AT1G21450" species:3702... 341 1.3e-29 1
TAIR|locus:2120106 - symbol:SHR "AT4G37650" species:3702 ... 331 3.1e-28 1
TAIR|locus:2148293 - symbol:AT5G59450 species:3702 "Arabi... 329 1.1e-27 1
TAIR|locus:2025022 - symbol:SCL14 "SCARECROW-like 14" spe... 330 1.6e-27 1
TAIR|locus:2025032 - symbol:AT1G07520 "AT1G07520" species... 327 3.1e-27 1
TAIR|locus:2115340 - symbol:HAM4 "AT4G36710" species:3702... 312 5.6e-26 1
TAIR|locus:2075155 - symbol:AT3G46600 species:3702 "Arabi... 290 5.8e-23 1
UNIPROTKB|Q84MM9 - symbol:MOC1 "Protein MONOCULM 1" speci... 282 1.4e-22 1
UNIPROTKB|Q6DLS1 - symbol:SCL1 "SCARECROW-like protein" s... 283 1.5e-22 1
TAIR|locus:2040701 - symbol:AT2G37650 species:3702 "Arabi... 276 4.0e-21 1
TAIR|locus:2126901 - symbol:HAM3 "AT4G00150" species:3702... 273 4.8e-21 1
TAIR|locus:2055622 - symbol:HAM1 "AT2G45160" species:3702... 267 3.3e-20 1
TAIR|locus:2083073 - symbol:AT3G49950 "AT3G49950" species... 250 6.6e-19 1
TAIR|locus:2184625 - symbol:SCL8 "AT5G52510" species:3702... 219 8.1e-15 1
TAIR|locus:2087994 - symbol:AT3G13840 "AT3G13840" species... 202 4.0e-13 1
TAIR|locus:1009023400 - symbol:AT5G67411 "AT5G67411" spec... 113 0.00035 1
>TAIR|locus:2132482 [details] [associations]
symbol:AT4G08250 "AT4G08250" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003700 GO:GO:0006351
InterPro:IPR005202 PROSITE:PS50985 EMBL:AL080252 EMBL:AL161510
EMBL:BT011797 IPI:IPI00529829 PIR:T10552 RefSeq:NP_192565.1
UniGene:At.50325 DNASU:826375 EnsemblPlants:AT4G08250.1
GeneID:826375 KEGG:ath:AT4G08250 GeneFarm:4263 TAIR:At4g08250
eggNOG:NOG320032 HOGENOM:HOG000239937 InParanoid:Q9SUF5 OMA:SLEAGFP
PhylomeDB:Q9SUF5 ProtClustDB:CLSN2685964 Genevestigator:Q9SUF5
Uniprot:Q9SUF5
Length = 483
Score = 1255 (446.8 bits), Expect = 7.6e-128, P = 7.6e-128
Identities = 266/496 (53%), Positives = 327/496 (65%)
Query: 1 MAMDFDDFLHLDFSGYSSXXXXXXXGDDYACNWNDWSPVVDWEALSGGQDDFHDLIESMM 60
M ++DFL L FS ++ + ND +DW+ DF D+IES+M
Sbjct: 1 MNYPYEDFLDLFFSTHTDPLATAASTSSNGYSLNDLD--IDWDC------DFRDVIESIM 52
Query: 61 DDSG--LNPNARVANIAHEP---CNXXXXXXXXXXMAVDEETNGEDFKGLRLVHLLMAAA 115
D G + P + + H+ CN E ++ KGLRLVHLL+AAA
Sbjct: 53 GDEGAMMEPESEAVPMLHDQEGLCNSASTGLSVADGVSFGEPKTDESKGLRLVHLLVAAA 112
Query: 116 EALTGVNKSRELAQVILIRLKELVSPNDGSNMERLAAYFTDALQGLLEGAGGVHGNNKHY 175
+A TG NKSREL +VIL RLK+LVSP D +NMERLAA+FT+ L LLE +
Sbjct: 113 DASTGANKSRELTRVILARLKDLVSPGDRTNMERLAAHFTNGLSKLLE---------RDS 163
Query: 176 TSNGPHHRDD-HHHTDVLAAFQLLQDMSPYVKFGHFTANQAILEAVANDRRVHIVDYDIM 234
HRDD + DV++AF+LLQ+MSPYV FG+ TA QAILEAV +RR+HIVDYDI
Sbjct: 164 VLCPQQHRDDVYDQADVISAFELLQNMSPYVNFGYLTATQAILEAVKYERRIHIVDYDIN 223
Query: 235 EGIQWASLMQALVSRKDGPPAPHLRITALXXXXXXXXXISTVQETGRRLVAFAASIGQPF 294
EG+QWASLMQALVSR GP A HLRITAL ++ VQETGRRL AFA SIGQPF
Sbjct: 224 EGVQWASLMQALVSRNTGPSAQHLRITALSRATNGKKSVAAVQETGRRLTAFADSIGQPF 283
Query: 295 SFHQCRLDSDETFKASALKLVRGEALIINCMLHLPHFSYRAPDSIASFLSGAKTLNPRLV 354
S+ C+LD++ F S+LKLVRGEA++INCMLHLP FS++ P S+ SFLS AKTLNP+LV
Sbjct: 284 SYQHCKLDTN-AFSTSSLKLVRGEAVVINCMLHLPRFSHQTPSSVISFLSEAKTLNPKLV 342
Query: 355 TLVEEETGPIGDGGFVSRFMDSLHHYSAVYDSLEAGFPMQSRARALVERVFLGPRISGSL 414
TLV EE G +G+ GF+ RFMD LH +SA++DSLEAG + + AR VERVF+GP ++ L
Sbjct: 343 TLVHEEVGLMGNQGFLYRFMDLLHQFSAIFDSLEAGLSIANPARGFVERVFIGPWVANWL 402
Query: 415 ARIYRTCGEEEVY-SWGDWLGVVGFKPVNISFANHCQAKLLLGLFNDGYRVEELANNRLV 473
RI E E + SW WL GFKP+ +SF N CQAKLLL LFNDG+RVEEL N LV
Sbjct: 403 TRITANDAEVESFASWPQWLETNGFKPLEVSFTNRCQAKLLLSLFNDGFRVEELGQNGLV 462
Query: 474 LGWKSRRLLSASVWTS 489
LGWKSRRL+SAS W S
Sbjct: 463 LGWKSRRLVSASFWAS 478
>TAIR|locus:2080345 [details] [associations]
symbol:SCR "SCARECROW" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0009630
"gravitropism" evidence=IMP] [GO:0009956 "radial pattern formation"
evidence=IMP] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0042803 "protein homodimerization
activity" evidence=IPI] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0051457 "maintenance of protein location in
nucleus" evidence=IMP] [GO:0008356 "asymmetric cell division"
evidence=IMP] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
GO:GO:0009630 GO:GO:0008356 GO:GO:0051457 EMBL:AL132957
GO:GO:0010103 GO:GO:0009956 HOGENOM:HOG000238577 InterPro:IPR005202
PROSITE:PS50985 EMBL:U62798 EMBL:AY056315 EMBL:AY080840
EMBL:AY113991 IPI:IPI00524888 PIR:T47581 PIR:T51244
RefSeq:NP_190990.1 UniGene:At.71814 UniGene:At.932 IntAct:Q9M384
STRING:Q9M384 EnsemblPlants:AT3G54220.1 GeneID:824589
KEGG:ath:AT3G54220 GeneFarm:4242 TAIR:At3g54220 eggNOG:NOG311437
InParanoid:Q9M384 OMA:QERENSS PhylomeDB:Q9M384
ProtClustDB:CLSN2915643 Genevestigator:Q9M384 Uniprot:Q9M384
Length = 653
Score = 539 (194.8 bits), Expect = 5.6e-52, P = 5.6e-52
Identities = 143/393 (36%), Positives = 215/393 (54%)
Query: 100 EDFKGLRLVHLLMAAAEALTGVNKSRELAQVILIRLKELVSPNDGSNMERLAAYFTDALQ 159
+D +GL L+ LL+ AEA++ N E A +L+ + +L +P G++ +R+AAYF++A+
Sbjct: 283 QDEEGLHLLTLLLQCAEAVSADNL--EEANKLLLEISQLSTPY-GTSAQRVAAYFSEAMS 339
Query: 160 G-LLEGAGGVHGNNKHYTSNGPHHRDDHHHTDVLAAFQLLQDMSPYVKFGHFTANQAILE 218
LL G+ Y + H +++AFQ+ +SP VKF HFTANQAI E
Sbjct: 340 ARLLNSCLGI------YAALPSRWMPQTHSLKMVSAFQVFNGISPLVKFSHFTANQAIQE 393
Query: 219 AVANDRRVHIVDYDIMEGIQWASLMQALVSRKDGPPAPHLRITALXXXXXXXXXISTVQE 278
A + VHI+D DIM+G+QW L L SR GPP H+R+T L + +Q
Sbjct: 394 AFEKEDSVHIIDLDIMQGLQWPGLFHILASRPGGPP--HVRLTGLGTS------MEALQA 445
Query: 279 TGRRLVAFAASIGQPFSFHQCRL-DSDETFKASALKLVRGEALIINCMLHLPHFSYRAPD 337
TG+RL FA +G PF F C L + L + + EA+ ++ L H Y
Sbjct: 446 TGKRLSDFADKLGLPFEF--CPLAEKVGNLDTERLNVRKREAVAVHW---LQHSLYDVTG 500
Query: 338 SIASFLSGAKTLNPRLVTLVEEETGPIGDGGFVSRFMDSLHHYSAVYDSLEAGFPMQSRA 397
S A L + L P++VT+VE++ G F+ RF++++H+YSA++DSL A + +S
Sbjct: 501 SDAHTLWLLQRLAPKVVTVVEQDLSHAGS--FLGRFVEAIHYYSALFDSLGASYGEESEE 558
Query: 398 RALVERVFLGPRISGSLARIYRT-CGEEEVYSWGDWLGVVGFKPVNISFANHCQAKLLLG 456
R +VE+ L I LA + GE + SW + + GFK ++++ QA LLLG
Sbjct: 559 RHVVEQQLLSKEIRNVLAVGGPSRSGEVKFESWREKMQQCGFKGISLAGNAATQATLLLG 618
Query: 457 LF-NDGYRVEELANNRLVLGWKSRRLLSASVWT 488
+F +DGY + + N L LGWK LL+AS WT
Sbjct: 619 MFPSDGYTLVD-DNGTLKLGWKDLSLLTASAWT 650
>TAIR|locus:2020487 [details] [associations]
symbol:LAS "AT1G55580" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0010223 "secondary shoot formation" evidence=IMP]
Pfam:PF03514 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003700 GO:GO:0006351 EMBL:AC002328 GO:GO:0010223
HOGENOM:HOG000238577 InterPro:IPR005202 PROSITE:PS50985
eggNOG:NOG323432 EMBL:AY196482 EMBL:BT026519 EMBL:EF598379
EMBL:EF598380 EMBL:EF598381 EMBL:EF598382 EMBL:EF598383
EMBL:EF598384 EMBL:EF598385 EMBL:EF598386 EMBL:EF598387
EMBL:EF598388 EMBL:EF598389 EMBL:EF598390 EMBL:EF598391
EMBL:EF598392 EMBL:EF598393 EMBL:EF598394 EMBL:EF598395
EMBL:EF598396 EMBL:EF598397 EMBL:EF598398 EMBL:EF598399
EMBL:EF598400 EMBL:EF598401 EMBL:EF598402 IPI:IPI00532485
RefSeq:NP_175954.1 UniGene:At.45199 STRING:Q9ZWC5
EnsemblPlants:AT1G55580.1 GeneID:842007 KEGG:ath:AT1G55580
GeneFarm:4247 TAIR:At1g55580 InParanoid:Q9ZWC5 OMA:EREANHG
PhylomeDB:Q9ZWC5 ProtClustDB:CLSN2682663 Genevestigator:Q9ZWC5
Uniprot:Q9ZWC5
Length = 445
Score = 468 (169.8 bits), Expect = 7.7e-48, Sum P(2) = 7.7e-48
Identities = 123/322 (38%), Positives = 174/322 (54%)
Query: 183 RDDHHHTDVLAAFQL-LQDMSPYVKFGHFTANQAILEAV-ANDR-RVHIVDYDIMEGIQW 239
R ++++D + + L L ++P+++FGH TANQAIL+A ND +HI+D DI +G+QW
Sbjct: 133 RTKNNNSDFESCYYLWLNQLTPFIRFGHLTANQAILDATETNDNGALHILDLDISQGLQW 192
Query: 240 ASLMQALVSRKDGP--PAPHLRITALXXXXXXXXXISTVQETGRRLVAFAASIGQPFSFH 297
LMQAL R P P P LRIT ++ + TG RL FA S+G F FH
Sbjct: 193 PPLMQALAERSSNPSSPPPSLRITGCGRD------VTGLNRTGDRLTRFADSLGLQFQFH 246
Query: 298 QCRLDSDET------FKASALKLVRGEALIINCMLHLPHFSYRAP-DSIASFLSGAKTLN 350
+ ++ + AL V+GE + +NC+ H H + D I FLS K+LN
Sbjct: 247 TLVIVEEDLAGLLLQIRLLALSAVQGETIAVNCV-HFLHKIFNDDGDMIGHFLSAIKSLN 305
Query: 351 PRLVTLVEEETGPIGDGGFVSRFMDSLHHYSAVYDSLEAGFPMQSRARALVERVFLGPRI 410
R+VT+ E E GD F++RF +++ HY A++DSLEA P SR R +E+ + G I
Sbjct: 306 SRIVTMAEREANH-GDHSFLNRFSEAVDHYMAIFDSLEATLPPNSRERLTLEQRWFGKEI 364
Query: 411 SGSLA--RIYRTCGEEEVYSWGDWLGVVGFKPVNI-SFANHCQAKLLLGLF--NDGYRVE 465
+A R W + + GF V I SFA QAKLLL L ++GY ++
Sbjct: 365 LDVVAAEETERKQRHRRFEIWEEMMKRFGFVNVPIGSFALS-QAKLLLRLHYPSEGYNLQ 423
Query: 466 ELANNRLVLGWKSRRLLSASVW 487
L NN L LGW++R L S S W
Sbjct: 424 FL-NNSLFLGWQNRPLFSVSSW 444
Score = 49 (22.3 bits), Expect = 7.7e-48, Sum P(2) = 7.7e-48
Identities = 17/50 (34%), Positives = 22/50 (44%)
Query: 109 HLLMAAAEALTGVNKSRELAQVILIRLKELVSPNDGSNMERLAAYFTDAL 158
HL A V++S A L+ + L S G + ERL FT AL
Sbjct: 40 HLRRLLFTAANFVSQSNFTAAQNLLSILSLNSSPHGDSTERLVHLFTKAL 89
>TAIR|locus:2165685 [details] [associations]
symbol:AT5G41920 "AT5G41920" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003700 GO:GO:0006351 EMBL:AB017067
HOGENOM:HOG000238577 InterPro:IPR005202 PROSITE:PS50985
EMBL:BT029760 IPI:IPI00535918 RefSeq:NP_199007.1 UniGene:At.67848
UniGene:At.72727 IntAct:Q9FHZ1 DNASU:834197
EnsemblPlants:AT5G41920.1 GeneID:834197 KEGG:ath:AT5G41920
GeneFarm:4246 TAIR:At5g41920 eggNOG:NOG72098 InParanoid:Q9FHZ1
OMA:PWKGYTL PhylomeDB:Q9FHZ1 ProtClustDB:CLSN2686419
Genevestigator:Q9FHZ1 Uniprot:Q9FHZ1
Length = 405
Score = 480 (174.0 bits), Expect = 1.0e-45, P = 1.0e-45
Identities = 139/401 (34%), Positives = 200/401 (49%)
Query: 95 EETNGED-FKGLRLVHLLMAAAEALTGVNKSRELAQVILIRLKELVSPNDGSNMERLAAY 153
EET D ++L+ LL+ AE + + RE A +L + E+ SP GS+ ER+ AY
Sbjct: 27 EETLENDGAAAIKLLSLLLQCAEYVA-TDHLRE-ASTLLSEISEICSPF-GSSPERVVAY 83
Query: 154 FTDALQGLLEGAGGVHGNNKHYTSNGPHHRDDHHHTDVLAAFQLLQDMSPYVKFGHFTAN 213
F ALQ + + + G S P + +A Q +SP +KF HFTAN
Sbjct: 84 FAQALQTRVISSY-LSGACSPL-SEKP--LTVVQSQKIFSALQTYNSVSPLIKFSHFTAN 139
Query: 214 QAILEAVANDRRVHIVDYDIMEGIQWASLMQALVSRKDGPPAPHLRITALXXXXXXXXXI 273
QAI +A+ + VHI+D D+M+G+QW +L L SR +RIT
Sbjct: 140 QAIFQALDGEDSVHIIDLDVMQGLQWPALFHILASRPR--KLRSIRITGFGSSS------ 191
Query: 274 STVQETGRRLVAFAASIGQPFSFHQCRLDSDETFKASALKLVRGEALIINCMLHLPHFSY 333
+ TGRRL FA+S+ PF FH S L +GEA++++ M H Y
Sbjct: 192 DLLASTGRRLADFASSLNLPFEFHPIEGIIGNLIDPSQLATRQGEAVVVHWMQHR---LY 248
Query: 334 RAPDSIASFLSGAKTLNPRLVTLVEEETGPIGDGGFVSRFMDSLHHYSAVYDSLEAGFPM 393
+ L + L P L+T+VE+E G F+ RF+++LH+YSA++D+L G
Sbjct: 249 DVTGNNLETLEILRRLKPNLITVVEQELSYDDGGSFLGRFVEALHYYSALFDALGDGLGE 308
Query: 394 QSRARALVERVFLGPRISGSLARIYRTCGEEEVYSWGDWLGVVGFKPVNISFANHCQAKL 453
+S R VE++ LG I +A G + W + L VGF+PV++ QA L
Sbjct: 309 ESGERFTVEQIVLGTEIRNIVAH---GGGRRKRMKWKEELSRVGFRPVSLRGNPATQAGL 365
Query: 454 LLGLFN-DGYRVEELANNRLVLGWKSRRLLSASVWTSS-FD 492
LLG+ +GY + E N L LGWK LL+AS W S FD
Sbjct: 366 LLGMLPWNGYTLVE-ENGTLRLGWKDLSLLTASAWKSQPFD 405
>TAIR|locus:2099624 [details] [associations]
symbol:RGL2 "RGA-like 2" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;TAS] [GO:0009740 "gibberellic acid mediated signaling
pathway" evidence=RCA;TAS] [GO:0010187 "negative regulation of seed
germination" evidence=IMP] [GO:0009938 "negative regulation of
gibberellic acid mediated signaling pathway" evidence=TAS]
[GO:0009651 "response to salt stress" evidence=IGI] [GO:0009723
"response to ethylene stimulus" evidence=IGI;RCA] [GO:0009737
"response to abscisic acid stimulus" evidence=IEP;IGI;RCA]
[GO:0042538 "hyperosmotic salinity response" evidence=IGI;RCA]
[GO:0010029 "regulation of seed germination" evidence=IGI]
[GO:2000033 "regulation of seed dormancy process" evidence=IGI]
[GO:0009739 "response to gibberellin stimulus" evidence=IEP]
[GO:2000377 "regulation of reactive oxygen species metabolic
process" evidence=IGI] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=IGI;RCA] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=IGI;RCA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009062 "fatty acid catabolic process"
evidence=RCA] [GO:0009686 "gibberellin biosynthetic process"
evidence=RCA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010325 "raffinose family oligosaccharide biosynthetic process"
evidence=RCA] [GO:0048444 "floral organ morphogenesis"
evidence=RCA] [GO:0048608 "reproductive structure development"
evidence=RCA] Pfam:PF03514 GO:GO:0009737 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0030154 GO:GO:0006952
GO:GO:0009723 GO:GO:0003700 GO:GO:0006351 GO:GO:0010187
GO:GO:0009908 GO:GO:0042538 EMBL:AC009895 GO:GO:2000377
GO:GO:0040029 GO:GO:0009867 GO:GO:0009863 GO:GO:0009740
eggNOG:NOG243696 HOGENOM:HOG000238577 KO:K14494 GO:GO:0009938
GO:GO:2000033 InterPro:IPR021914 InterPro:IPR005202 Pfam:PF12041
PROSITE:PS50985 EMBL:AK118009 IPI:IPI00521981 RefSeq:NP_186995.1
UniGene:At.18489 UniGene:At.67027 ProteinModelPortal:Q8GXW1
SMR:Q8GXW1 IntAct:Q8GXW1 STRING:Q8GXW1 EnsemblPlants:AT3G03450.1
GeneID:821251 KEGG:ath:AT3G03450 GeneFarm:4240 TAIR:At3g03450
InParanoid:Q8GXW1 OMA:MLSELNN PhylomeDB:Q8GXW1
ProtClustDB:CLSN2684085 Genevestigator:Q8GXW1 GermOnline:AT3G03450
Uniprot:Q8GXW1
Length = 547
Score = 472 (171.2 bits), Expect = 7.1e-45, P = 7.1e-45
Identities = 136/398 (34%), Positives = 209/398 (52%)
Query: 104 GLRLVHLLMAAAEALTGVNKSRELAQVILIRLKELVSPNDGSNMERLAAYFTDALQGLLE 163
G+RLVH L+A AEA+ N + LA ++ R+ L G+ M ++A YF AL
Sbjct: 177 GVRLVHALVACAEAIHQENLN--LADALVKRVGTLAGSQAGA-MGKVATYFAQAL----- 228
Query: 164 GAGGVHGNNKHYTSNGPHHRDDHHHTDVLAA----FQLLQDMS-----PYVKFGHFTANQ 214
A ++ + YT+ TDV AA F+ + +M PY+KF HFTANQ
Sbjct: 229 -ARRIY---RDYTAE----------TDVCAAVNPSFEEVLEMHFYESCPYLKFAHFTANQ 274
Query: 215 AILEAVANDRRVHIVDYDIMEGIQWASLMQALVSRKDGPPAPHLRITALXXXXXXXXXIS 274
AILEAV RRVH++D + +G+QW +LMQAL R GPP+ R+T +
Sbjct: 275 AILEAVTTARRVHVIDLGLNQGMQWPALMQALALRPGGPPS--FRLTGIGPPQTENS--D 330
Query: 275 TVQETGRRLVAFAASIGQPFSFHQCRLDSDETFKASALKL-VRGEALIINCMLHLPHFSY 333
++Q+ G +L FA ++G F F +S + + E L++N + L
Sbjct: 331 SLQQLGWKLAQFAQNMGVEFEFKGLAAESLSDLEPEMFETRPESETLVVNSVFELHRLLA 390
Query: 334 RAPDSIASFLSGAKTLNPRLVTLVEEETGPIGDGGFVSRFMDSLHHYSAVYDSLEAGFPM 393
R+ SI L+ K + P +VT+VE+E G F+ RF ++LH+YS+++DSLE + +
Sbjct: 391 RS-GSIEKLLNTVKAIKPSIVTVVEQEANHNGIV-FLDRFNEALHYYSSLFDSLEDSYSL 448
Query: 394 QSRARALVERVFLGPRISGSLAR--IYRTCGEEEVYSWGDWLGVVGFKPVNISFANHCQA 451
S+ R + E V+LG +I +A R E W + GF P+++ + QA
Sbjct: 449 PSQDRVMSE-VYLGRQILNVVAAEGSDRVERHETAAQWRIRMKSAGFDPIHLGSSAFKQA 507
Query: 452 KLLLGLF--NDGYRVEELANNRLVLGWKSRRLLSASVW 487
+LL L+ DGYRVEE + L++GW++R L++ S W
Sbjct: 508 SMLLSLYATGDGYRVEE-NDGCLMIGWQTRPLITTSAW 544
>TAIR|locus:2157477 [details] [associations]
symbol:RGL3 "RGA-like protein 3" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS;TAS] [GO:0009739 "response to gibberellin
stimulus" evidence=IEP;ISS] [GO:0009740 "gibberellic acid mediated
signaling pathway" evidence=RCA;TAS] [GO:0009686 "gibberellin
biosynthetic process" evidence=RCA] [GO:0009694 "jasmonic acid
metabolic process" evidence=RCA] [GO:0009723 "response to ethylene
stimulus" evidence=RCA] [GO:0009737 "response to abscisic acid
stimulus" evidence=RCA] [GO:0009753 "response to jasmonic acid
stimulus" evidence=RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0009863 "salicylic acid mediated signaling
pathway" evidence=RCA] [GO:0009867 "jasmonic acid mediated
signaling pathway" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010325 "raffinose family
oligosaccharide biosynthetic process" evidence=RCA] [GO:0042538
"hyperosmotic salinity response" evidence=RCA] [GO:0048444 "floral
organ morphogenesis" evidence=RCA] Pfam:PF03514 GO:GO:0007275
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003700
GO:GO:0006351 GO:GO:0040029 EMBL:AL391150 GO:GO:0009740
HOGENOM:HOG000238577 KO:K14494 InterPro:IPR021914
InterPro:IPR005202 Pfam:PF12041 PROSITE:PS50985
ProtClustDB:CLSN2684085 EMBL:AK117226 EMBL:BT005905 IPI:IPI00544591
PIR:T51475 RefSeq:NP_197251.1 UniGene:At.31541
ProteinModelPortal:Q9LF53 SMR:Q9LF53 PaxDb:Q9LF53 PRIDE:Q9LF53
EnsemblPlants:AT5G17490.1 GeneID:831615 KEGG:ath:AT5G17490
GeneFarm:4241 TAIR:At5g17490 eggNOG:NOG300920 InParanoid:Q9LF53
OMA:RRIYRIH PhylomeDB:Q9LF53 Genevestigator:Q9LF53
GermOnline:AT5G17490 Uniprot:Q9LF53
Length = 523
Score = 456 (165.6 bits), Expect = 3.5e-43, P = 3.5e-43
Identities = 135/376 (35%), Positives = 193/376 (51%)
Query: 133 IRLKE-LVSPNDGSNMERLAAYFTDALQ---GLLEGA-GGVHGNNKHYTSNGPHHRDDHH 187
+RL + LV+ + +E L+ DAL GLL + G G Y + R
Sbjct: 155 VRLVQALVACAEAVQLENLS--LADALVKRVGLLAASQAGAMGKVATYFAEALARRIYRI 212
Query: 188 HTDVLA---AFQ-LLQ----DMSPYVKFGHFTANQAILEAVANDRRVHIVDYDIMEGIQW 239
H A +F+ +LQ D PY+KF HFTANQAILEAV R VH++D + +G+QW
Sbjct: 213 HPSAAAIDPSFEEILQMNFYDSCPYLKFAHFTANQAILEAVTTSRVVHVIDLGLNQGMQW 272
Query: 240 ASLMQALVSRKDGPPAPHLRITALXXXXXXXXXISTVQETGRRLVAFAASIGQPFSFHQC 299
+LMQAL R GPP+ R+T + +QE G +L A +IG F F+
Sbjct: 273 PALMQALALRPGGPPS--FRLTGVGNPSNREG----IQELGWKLAQLAQAIGVEFKFNGL 326
Query: 300 RLDSDETFKASALKL-VRGEALIINCMLHLPHFSYRAPDSIASFLSGAKTLNPRLVTLVE 358
+ + + E L++N + L H P SI L+ K + P LVT+VE
Sbjct: 327 TTERLSDLEPDMFETRTESETLVVNSVFEL-HPVLSQPGSIEKLLATVKAVKPGLVTVVE 385
Query: 359 EETGPIGDGGFVSRFMDSLHHYSAVYDSLEAGFPMQSRARALVERVFLGPRISGSLA--- 415
+E GD F+ RF ++LH+YS+++DSLE G + S+ R + E V+LG +I +A
Sbjct: 386 QEANHNGDV-FLDRFNEALHYYSSLFDSLEDGVVIPSQDRVMSE-VYLGRQILNLVATEG 443
Query: 416 --RIYRTCGEEEVYSWGDWLGVVGFKPVNISFANHCQAKLLLGLFN--DGYRVEELANNR 471
RI R E + W +G GF PVN+ QA LLL L DGYRVEE +
Sbjct: 444 SDRIER---HETLAQWRKRMGSAGFDPVNLGSDAFKQASLLLALSGGGDGYRVEE-NDGS 499
Query: 472 LVLGWKSRRLLSASVW 487
L+L W+++ L++AS W
Sbjct: 500 LMLAWQTKPLIAASAW 515
>TAIR|locus:2201557 [details] [associations]
symbol:RGL1 "RGA-like 1" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;TAS] [GO:0009740 "gibberellic acid mediated signaling
pathway" evidence=RCA;TAS] [GO:0009938 "negative regulation of
gibberellic acid mediated signaling pathway" evidence=IMP]
[GO:0009651 "response to salt stress" evidence=IGI] [GO:0009723
"response to ethylene stimulus" evidence=IGI;RCA] [GO:0009737
"response to abscisic acid stimulus" evidence=IGI;RCA] [GO:0042538
"hyperosmotic salinity response" evidence=IGI;RCA] [GO:0009739
"response to gibberellin stimulus" evidence=IEP] [GO:2000377
"regulation of reactive oxygen species metabolic process"
evidence=IGI] [GO:0009863 "salicylic acid mediated signaling
pathway" evidence=IGI;RCA] [GO:0009867 "jasmonic acid mediated
signaling pathway" evidence=IGI;RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010325 "raffinose family oligosaccharide biosynthetic process"
evidence=RCA] [GO:0048444 "floral organ morphogenesis"
evidence=RCA] Pfam:PF03514 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0009737 GO:GO:0005634 GO:GO:0030154 GO:GO:0009723
GO:GO:0003700 GO:GO:0006351 GO:GO:0009908 GO:GO:0042538
GO:GO:2000377 EMBL:AC020665 GO:GO:0040029 GO:GO:0009867
GO:GO:0009863 GO:GO:0009740 HOGENOM:HOG000238577 KO:K14494
GO:GO:0009938 InterPro:IPR021914 InterPro:IPR005202 Pfam:PF12041
PROSITE:PS50985 EMBL:AJ224957 EMBL:AY048749 EMBL:AY070035
EMBL:AY096506 IPI:IPI00518407 PIR:G96688 RefSeq:NP_176809.1
UniGene:At.26400 UniGene:At.75607 ProteinModelPortal:Q9C8Y3
SMR:Q9C8Y3 IntAct:Q9C8Y3 STRING:Q9C8Y3 EnsemblPlants:AT1G66350.1
GeneID:842953 KEGG:ath:AT1G66350 GeneFarm:4239 TAIR:At1g66350
eggNOG:NOG314007 InParanoid:Q9C8Y3 OMA:TSAWRIN PhylomeDB:Q9C8Y3
ProtClustDB:CLSN2914366 Genevestigator:Q9C8Y3 GermOnline:AT1G66350
Uniprot:Q9C8Y3
Length = 511
Score = 449 (163.1 bits), Expect = 1.9e-42, P = 1.9e-42
Identities = 133/390 (34%), Positives = 204/390 (52%)
Query: 108 VHLLMAAAEALTGVNKSR-ELAQVILIRLKELVSPNDGSNMERLAAYFTDALQGLLEGAG 166
V L+ A V ++ +LA ++ + L S G+ M ++A YF + L A
Sbjct: 150 VRLVHALLACAEAVQQNNLKLADALVKHVGLLASSQAGA-MRKVATYFAEGL------AR 202
Query: 167 GVHGNNKHYTSNGPHHRDDHHHTDVLAAFQL-LQDMSPYVKFGHFTANQAILEAVANDRR 225
++ + Y P RDD + Q+ + PY+KF HFTANQAILE A +
Sbjct: 203 RIY---RIY----P--RDDVALSSFSDTLQIHFYESCPYLKFAHFTANQAILEVFATAEK 253
Query: 226 VHIVDYDIMEGIQWASLMQALVSRKDGPPAPHLRITALXXXXXXXXXISTVQETGRRLVA 285
VH++D + G+QW +L+QAL R +GPP R+T + ++ +QE G +L
Sbjct: 254 VHVIDLGLNHGLQWPALIQALALRPNGPP--DFRLTGIGYS------LTDIQEVGWKLGQ 305
Query: 286 FAASIGQPFSFHQCRLDSDETFKASALKLVRG-EALIINCMLHLPHFSYRAPDSIASFLS 344
A++IG F F L++ K L + G E++ +N + L H P SI FLS
Sbjct: 306 LASTIGVNFEFKSIALNNLSDLKPEMLDIRPGLESVAVNSVFEL-HRLLAHPGSIDKFLS 364
Query: 345 GAKTLNPRLVTLVEEETGPIGDGGFVSRFMDSLHHYSAVYDSLEAGFPMQSRARALVERV 404
K++ P ++T+VE+E G F+ RF +SLH+YS+++DSLE G P Q R ++ +
Sbjct: 365 TIKSIRPDIMTVVEQEANHNGTV-FLDRFTESLHYYSSLFDSLE-GPPSQDR---VMSEL 419
Query: 405 FLGPRISGSLA-----RIYRTCGEEEVYSWGDWLGVVGFKPVNISFANHCQAKLLLGLFN 459
FLG +I +A R+ R E + W + G+ GFKPV+I + QA +LL L+
Sbjct: 420 FLGRQILNLVACEGEDRVER---HETLNQWRNRFGLGGFKPVSIGSNAYKQASMLLALYA 476
Query: 460 --DGYRVEELANNRLVLGWKSRRLLSASVW 487
DGY VEE L+LGW++R L++ S W
Sbjct: 477 GADGYNVEE-NEGCLLLGWQTRPLIATSAW 505
>TAIR|locus:2005516 [details] [associations]
symbol:RGA1 "REPRESSOR OF GA1-3 1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS;IDA;TAS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=TAS] [GO:0009740
"gibberellic acid mediated signaling pathway" evidence=RCA;TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009651 "response
to salt stress" evidence=IGI;RCA] [GO:0009723 "response to ethylene
stimulus" evidence=IGI;RCA] [GO:0009737 "response to abscisic acid
stimulus" evidence=IGI;RCA] [GO:0042538 "hyperosmotic salinity
response" evidence=IGI;RCA] [GO:0010029 "regulation of seed
germination" evidence=IGI] [GO:2000033 "regulation of seed dormancy
process" evidence=IGI] [GO:0010187 "negative regulation of seed
germination" evidence=IGI] [GO:0010218 "response to far red light"
evidence=IEP] [GO:2000377 "regulation of reactive oxygen species
metabolic process" evidence=IGI] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=IGI;RCA] [GO:0042176
"regulation of protein catabolic process" evidence=IMP] [GO:0006096
"glycolysis" evidence=RCA] [GO:0006833 "water transport"
evidence=RCA] [GO:0006972 "hyperosmotic response" evidence=RCA]
[GO:0007030 "Golgi organization" evidence=RCA] [GO:0009266
"response to temperature stimulus" evidence=RCA] [GO:0009733
"response to auxin stimulus" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010325 "raffinose family
oligosaccharide biosynthetic process" evidence=RCA] [GO:0032880
"regulation of protein localization" evidence=RCA] [GO:0042744
"hydrogen peroxide catabolic process" evidence=RCA] [GO:0046686
"response to cadmium ion" evidence=RCA] [GO:0048444 "floral organ
morphogenesis" evidence=RCA] [GO:0009938 "negative regulation of
gibberellic acid mediated signaling pathway" evidence=IGI]
Pfam:PF03514 GO:GO:0007275 GO:GO:0009737 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009723 GO:GO:0003700
GO:GO:0006351 GO:GO:0010218 GO:GO:0010187 GO:GO:0042176
GO:GO:0042538 EMBL:AC005560 GO:GO:2000377 GO:GO:0040029
GO:GO:0009867 GO:GO:0009740 eggNOG:NOG243696 HOGENOM:HOG000238577
KO:K14494 ProtClustDB:CLSN2682993 GO:GO:0009938 GO:GO:2000033
InterPro:IPR021914 InterPro:IPR005202 Pfam:PF12041 PROSITE:PS50985
EMBL:Y11336 EMBL:Y15194 EMBL:AY052239 EMBL:AY054160 EMBL:BT010467
IPI:IPI00523272 PIR:D84426 RefSeq:NP_178266.1 UniGene:At.24012
ProteinModelPortal:Q9SLH3 SMR:Q9SLH3 IntAct:Q9SLH3 STRING:Q9SLH3
PRIDE:Q9SLH3 EnsemblPlants:AT2G01570.1 GeneID:814686
KEGG:ath:AT2G01570 GeneFarm:4238 TAIR:At2g01570 InParanoid:Q9SLH3
OMA:VHALMAC PhylomeDB:Q9SLH3 Genevestigator:Q9SLH3
GermOnline:AT2G01570 Uniprot:Q9SLH3
Length = 587
Score = 437 (158.9 bits), Expect = 3.6e-41, P = 3.6e-41
Identities = 129/393 (32%), Positives = 197/393 (50%)
Query: 108 VHLLMAAAEALTGVNKSR-ELAQVILIRLKELVSPNDGSNMERLAAYFTDALQGLLEGAG 166
V L+ A + ++ LA+ ++ ++ L G+ M ++A YF +AL
Sbjct: 219 VRLVHALMACAEAIQQNNLTLAEALVKQIGCLAVSQAGA-MRKVATYFAEALA------- 270
Query: 167 GVHGNNKHYTSNGPHHRDDHHHTDVLAAFQLLQDMSPYVKFGHFTANQAILEAVANDRRV 226
+ Y + P ++ DH +D L + PY+KF HFTANQAILEA +RV
Sbjct: 271 -----RRIYRLSPPQNQIDHCLSDTLQMH--FYETCPYLKFAHFTANQAILEAFEGKKRV 323
Query: 227 HIVDYDIMEGIQWASLMQALVSRKDGPPAPHLRITALXXXXXXXXXISTVQETGRRLVAF 286
H++D+ + +G+QW +LMQAL R+ GPP R+T + + E G +L
Sbjct: 324 HVIDFSMNQGLQWPALMQALALREGGPPT--FRLTGIGPPAPDNS--DHLHEVGCKLAQL 379
Query: 287 AASIGQPFSFHQCRLDSDETFKASALKLVRG--EALIINCMLHLPHFSYRAPDSIASFLS 344
A +I F + +S AS L+L EA+ +N + L H P I L
Sbjct: 380 AEAIHVEFEYRGFVANSLADLDASMLELRPSDTEAVAVNSVFEL-HKLLGRPGGIEKVLG 438
Query: 345 GAKTLNPRLVTLVEEETGPIGDGGFVSRFMDSLHHYSAVYDSLEAGFPMQSRARALVERV 404
K + P + T+VE+E+ G F+ RF +SLH+YS ++DSLE G P S+ + + E V
Sbjct: 439 VVKQIKPVIFTVVEQESNHNGPV-FLDRFTESLHYYSTLFDSLE-GVP-NSQDKVMSE-V 494
Query: 405 FLGPRISGSLA-----RIYRTCGEEEVYSWGDWLGVVGFKPVNISFANHCQAKLLLGLFN 459
+LG +I +A R+ R E + WG+ G G P ++ QA +LL +FN
Sbjct: 495 YLGKQICNLVACEGPDRVER---HETLSQWGNRFGSSGLAPAHLGSNAFKQASMLLSVFN 551
Query: 460 DG--YRVEELANNRLVLGWKSRRLLSASVWTSS 490
G YRVEE +N L+LGW +R L++ S W S
Sbjct: 552 SGQGYRVEE-SNGCLMLGWHTRPLITTSAWKLS 583
>TAIR|locus:2174974 [details] [associations]
symbol:AT5G66770 "AT5G66770" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003700 GO:GO:0006351 EMBL:AB010700
InterPro:IPR005202 PROSITE:PS50985 EMBL:AY062538 EMBL:BT002580
IPI:IPI00537848 RefSeq:NP_201478.1 UniGene:At.27307
ProteinModelPortal:Q9FL03 IntAct:Q9FL03 PRIDE:Q9FL03
EnsemblPlants:AT5G66770.1 GeneID:836810 KEGG:ath:AT5G66770
GeneFarm:4249 TAIR:At5g66770 eggNOG:NOG324692 HOGENOM:HOG000240374
InParanoid:Q9FL03 OMA:DASCSAP PhylomeDB:Q9FL03
ProtClustDB:CLSN2684429 Genevestigator:Q9FL03 Uniprot:Q9FL03
Length = 584
Score = 432 (157.1 bits), Expect = 1.2e-40, P = 1.2e-40
Identities = 133/401 (33%), Positives = 190/401 (47%)
Query: 94 DEETNGEDFKGLRLVHLLMAAAEALTGVNKSR-ELAQVILIRLKELVSPNDGSNMERLAA 152
D ETN + L L+ A ++ S A L++++E VS G ER+A
Sbjct: 200 DPETNDSEDDDFDLEPPLLKAIYDCARISDSDPNEASKTLLQIRESVSEL-GDPTERVAF 258
Query: 153 YFTDALQGLLEGAGGVHGNNKHYTSNGPHHRDDHHHTDVLAAFQLLQDMSPYVKFGHFTA 212
YFT+AL L N TS+ +D ++ +++ L D PY KF H TA
Sbjct: 259 YFTEALSNRLSP-------NSPATSSSSSSTED-----LILSYKTLNDACPYSKFAHLTA 306
Query: 213 NQAILEAVANDRRVHIVDYDIMEGIQWASLMQALVSRKDGPPAPHLRITALXXXXXXXXX 272
NQAILEA ++HIVD+ I++GIQW +L+QAL +R G P +R++ +
Sbjct: 307 NQAILEATEKSNKIHIVDFGIVQGIQWPALLQALATRTSGKPT-QIRVSGIPAPSLGESP 365
Query: 273 ISTVQETGRRLVAFAASIGQPFSFHQCRLDSDETFKASALKLVRGEALIINCMLHLPHFS 332
++ TG RL FA + F F L S+ ++ E L +N ML L
Sbjct: 366 EPSLIATGNRLRDFAKVLDLNFDFIPI-LTPIHLLNGSSFRVDPDEVLAVNFMLQLYKLL 424
Query: 333 YRAPDSIASFLSGAKTLNPRLVTLVEEETGPIGDGGFVSRFMDSLHHYSAVYDSLEAGFP 392
P + + L AK+LNPR+VTL E E + GF +R ++L YSAV++SLE
Sbjct: 425 DETPTIVDTALRLAKSLNPRVVTLGEYEVS-LNRVGFANRVKNALQFYSAVFESLEPNLG 483
Query: 393 MQSRARALVERVFLGPRISGSLAR----IYRTCGEEEVYSWGDWLGVVGFKPVNISFANH 448
S R VER G RISG + I+R EE+ W + GF+ V +S
Sbjct: 484 RDSEERVRVERELFGRRISGLIGPEKTGIHRERMEEKE-QWRVLMENAGFESVKLSNYAV 542
Query: 449 CQAKLLLGLFNDG--YRVEELANNRLVLGWKSRRLLSASVW 487
QAK+LL +N Y + E + L W LL+ S W
Sbjct: 543 SQAKILLWNYNYSNLYSIVESKPGFISLAWNDLPLLTLSSW 583
>TAIR|locus:2164783 [details] [associations]
symbol:PAT1 "AT5G48150" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0004871 "signal transducer activity" evidence=IMP] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0009640 "photomorphogenesis"
evidence=IMP] Pfam:PF03514 GO:GO:0005737 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003700 GO:GO:0006351 GO:GO:0009640
GO:GO:0004871 EMBL:AB023039 HOGENOM:HOG000238577 InterPro:IPR005202
PROSITE:PS50985 EMBL:AF153443 EMBL:BT025326 EMBL:AK117483
IPI:IPI00517897 RefSeq:NP_199626.1 RefSeq:NP_974903.1
UniGene:At.7076 PRIDE:Q9LDL7 EnsemblPlants:AT5G48150.1
EnsemblPlants:AT5G48150.2 GeneID:834867 KEGG:ath:AT5G48150
GeneFarm:4233 TAIR:At5g48150 eggNOG:NOG287245 InParanoid:Q9LDL7
OMA:NSAHARG PhylomeDB:Q9LDL7 ProtClustDB:CLSN2686580
Genevestigator:Q9LDL7 Uniprot:Q9LDL7
Length = 490
Score = 421 (153.3 bits), Expect = 1.8e-39, P = 1.8e-39
Identities = 113/382 (29%), Positives = 192/382 (50%)
Query: 111 LMAAAEALTGVNKSRELAQVILIRLKELVSPNDGSNMERLAAYFTDALQGLLEGAGGVHG 170
L++ A+A++ +A ++ +L+++VS + G ++RL AY + L L +G
Sbjct: 123 LVSCAKAMS--ENDLMMAHSMMEKLRQMVSVS-GEPIQRLGAYLLEGLVAQLASSG---- 175
Query: 171 NNKHYTSNGPHHRDDHHHTDVLAAFQLLQDMSPYVKFGHFTANQAILEAVANDRRVHIVD 230
+ Y + + + T++L+ +L ++ PY KFG+ +AN AI EA+ + RVHI+D
Sbjct: 176 -SSIYKAL--NRCPEPASTELLSYMHILYEVCPYFKFGYMSANGAIAEAMKEENRVHIID 232
Query: 231 YDIMEGIQWASLMQALVSRKDGPPAPHLRITALXXXXXXXXXISTVQETGRRLVAFAASI 290
+ I +G QW +L+QA +R GPP +RIT + + G RL A
Sbjct: 233 FQIGQGSQWVTLIQAFAARPGGPP--RIRITGIDDMTSAYARGGGLSIVGNRLAKLAKQF 290
Query: 291 GQPFSFHQCRLDSDETFKASALKLVRGEALIIN---CMLHLPHFSYRAPDSIASFLSGAK 347
PF F+ + E K L + GEAL +N + H+P S + L K
Sbjct: 291 NVPFEFNSVSVSVSEV-KPKNLGVRPGEALAVNFAFVLHHMPDESVSTENHRDRLLRMVK 349
Query: 348 TLNPRLVTLVEEETGPIGDGGFVSRFMDSLHHYSAVYDSLEAGFPMQSRARALVERVFLG 407
+L+P++VTLVE+E+ F RFM+++++Y+A+++S++ P + R VE+ L
Sbjct: 350 SLSPKVVTLVEQESNT-NTAAFFPRFMETMNYYAAMFESIDVTLPRDHKQRINVEQHCLA 408
Query: 408 PRISGSLA--RIYRTCGEEEVYSWGDWLGVVGFKPVNISFANHCQAKLLLGLFNDGYRVE 465
+ +A R E + W G+ GF P +S + K LL ++D YR+E
Sbjct: 409 RDVVNIIACEGADRVERHELLGKWRSRFGMAGFTPYPLSPLVNSTIKSLLRNYSDKYRLE 468
Query: 466 ELANNRLVLGWKSRRLLSASVW 487
E + L LGW R L+++ W
Sbjct: 469 E-RDGALYLGWMHRDLVASCAW 489
>TAIR|locus:2101694 [details] [associations]
symbol:AT3G50650 "AT3G50650" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003700 GO:GO:0006351 EMBL:AL132979
InterPro:IPR005202 PROSITE:PS50985 HOGENOM:HOG000240374
ProtClustDB:CLSN2684429 EMBL:AK229252 EMBL:AF036304 IPI:IPI00542878
PIR:T46142 PIR:T51238 RefSeq:NP_190634.1 UniGene:At.42939
PaxDb:Q9SCR0 PRIDE:Q9SCR0 EnsemblPlants:AT3G50650.1 GeneID:824228
KEGG:ath:AT3G50650 GeneFarm:4248 TAIR:At3g50650 eggNOG:NOG329237
InParanoid:Q9SCR0 OMA:LIRIKES PhylomeDB:Q9SCR0
Genevestigator:Q9SCR0 Uniprot:Q9SCR0
Length = 542
Score = 416 (151.5 bits), Expect = 6.1e-39, P = 6.1e-39
Identities = 123/366 (33%), Positives = 174/366 (47%)
Query: 132 LIRLKELVSPNDGSNMERLAAYFTDALQGLLEGAGGVHGNNKHYTSNGPHHRDDHHHTDV 191
LIR+KE VS + G ++R+ YF +AL H + P D
Sbjct: 195 LIRIKESVSES-GDPIQRVGYYFAEALS--------------HKETESPSSSSSSSLEDF 239
Query: 192 LAAFQLLQDMSPYVKFGHFTANQAILEAVANDRRVHIVDYDIMEGIQWASLMQALVSRKD 251
+ +++ L D PY KF H TANQAILEA +HIVD+ I +GIQW++L+QAL +R
Sbjct: 240 ILSYKTLNDACPYSKFAHLTANQAILEATNQSNNIHIVDFGIFQGIQWSALLQALATRSS 299
Query: 252 GPPAPHLRITALXXXXXXXXXISTVQETGRRLVAFAASIGQPFSFHQCRLDSDETFKASA 311
G P +RI+ + ++ TG RL FAA + F F+ L + S+
Sbjct: 300 GKPT-RIRISGIPAPSLGDSPGPSLIATGNRLRDFAAILDLNFEFYPV-LTPIQLLNGSS 357
Query: 312 LKLVRGEALIINCMLHLPHFSYRAPDSIASFLSGAKTLNPRLVTLVEEETGPIGDGGFVS 371
++ E L++N ML L ++ + L A++LNPR+VTL E E + F +
Sbjct: 358 FRVDPDEVLVVNFMLELYKLLDETATTVGTALRLARSLNPRIVTLGEYEVS-LNRVEFAN 416
Query: 372 RFMDSLHHYSAVYDSLEAGFPMQSRARALVERVFLGPRISGSLARIYRTCGE-------- 423
R +SL YSAV++SLE S+ R VERV G RI L R +
Sbjct: 417 RVKNSLRFYSAVFESLEPNLDRDSKERLRVERVLFGRRIM-DLVRSDDDNNKPGTRFGLM 475
Query: 424 EEVYSWGDWLGVVGFKPVNISFANHCQAKLLLGLFNDG--YRVEELANNRLVLGWKSRRL 481
EE W + GF+PV S QAKLLL +N Y + E + L W + L
Sbjct: 476 EEKEQWRVLMEKAGFEPVKPSNYAVSQAKLLLWNYNYSTLYSLVESEPGFISLAWNNVPL 535
Query: 482 LSASVW 487
L+ S W
Sbjct: 536 LTVSSW 541
>TAIR|locus:2008076 [details] [associations]
symbol:SCL5 "AT1G50600" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0005829 "cytosol" evidence=IDA] Pfam:PF03514
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005634
GO:GO:0003700 GO:GO:0006351 EMBL:AC079279 EMBL:AC012561
HOGENOM:HOG000238577 InterPro:IPR005202 PROSITE:PS50985
eggNOG:NOG287245 EMBL:AY034929 EMBL:AY039611 EMBL:BT000883
EMBL:AF036302 IPI:IPI00519165 PIR:E96542 PIR:T51236
RefSeq:NP_175475.2 UniGene:At.14827 STRING:Q8H125 PaxDb:Q8H125
PRIDE:Q8H125 EnsemblPlants:AT1G50600.1 GeneID:841482
KEGG:ath:AT1G50600 GeneFarm:4229 TAIR:At1g50600 InParanoid:Q8H125
OMA:REERHEP PhylomeDB:Q8H125 ProtClustDB:CLSN2918355
ArrayExpress:Q8H125 Genevestigator:Q8H125 Uniprot:Q8H125
Length = 597
Score = 413 (150.4 bits), Expect = 1.4e-38, P = 1.4e-38
Identities = 117/384 (30%), Positives = 191/384 (49%)
Query: 110 LLMAAAEALTGVNKSRELAQVILIRLKELVSPNDGSNMERLAAYFTDALQGLLEGAGG-V 168
+L A+A+ N E+ ++ +L+++VS + G ++RL AY + L L +G +
Sbjct: 230 VLYECAKAVE--NYDLEMTDWLISQLQQMVSVS-GEPVQRLGAYMLEGLVARLASSGSSI 286
Query: 169 HGNNKHYTSNGPHHRDDHHHTDVLAAFQLLQDMSPYVKFGHFTANQAILEAVANDRRVHI 228
+ + GP ++L +L + PY KFG+ +AN AI EAV N+ VHI
Sbjct: 287 YKALRCKDPTGP---------ELLTYMHILYEACPYFKFGYESANGAIAEAVKNESFVHI 337
Query: 229 VDYDIMEGIQWASLMQALVSRKDGPPAPHLRITALXXXXXXXXXISTVQETGRRLVAFAA 288
+D+ I +G QW SL++AL +R GPP ++RIT + ++ G+RL A
Sbjct: 338 IDFQISQGGQWVSLIRALGARPGGPP--NVRITGIDDPRSSFARQGGLELVGQRLGKLAE 395
Query: 289 SIGQPFSFHQCRLDSDETFKASALKLVRGEALIINCML---HLPHFSYRAPDSIASFLSG 345
G PF FH L E + L + GEAL +N L H+P S + L
Sbjct: 396 MCGVPFEFHGAALCCTEV-EIEKLGVRNGEALAVNFPLVLHHMPDESVTVENHRDRLLRL 454
Query: 346 AKTLNPRLVTLVEEETGPIGDGGFVSRFMDSLHHYSAVYDSLEAGFPMQSRARALVERVF 405
K L+P +VTLVE+E F+ RF+++++HY AV++S++ + R VE+
Sbjct: 455 VKHLSPNVVTLVEQEANT-NTAPFLPRFVETMNHYLAVFESIDVKLARDHKERINVEQHC 513
Query: 406 LGPRISGSLA--RIYRTCGEEEVYSWGDWLGVVGFKPVNISFANHCQAKLLLGLFNDGYR 463
L + +A + R E + W + GFKP +S + K LL +++ Y
Sbjct: 514 LAREVVNLIACEGVEREERHEPLGKWRSRFHMAGFKPYPLSSYVNATIKGLLESYSEKYT 573
Query: 464 VEELANNRLVLGWKSRRLLSASVW 487
+EE + L LGWK++ L+++ W
Sbjct: 574 LEE-RDGALYLGWKNQPLITSCAW 596
>TAIR|locus:2006747 [details] [associations]
symbol:GAI "GIBBERELLIC ACID INSENSITIVE" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;ISS;IDA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;TAS]
[GO:0009740 "gibberellic acid mediated signaling pathway"
evidence=RCA;TAS] [GO:0009938 "negative regulation of gibberellic
acid mediated signaling pathway" evidence=IMP;TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0010233 "phloem transport"
evidence=IMP] [GO:0009651 "response to salt stress" evidence=IGI]
[GO:0009723 "response to ethylene stimulus" evidence=IGI;RCA]
[GO:0009737 "response to abscisic acid stimulus" evidence=IGI;RCA]
[GO:0042538 "hyperosmotic salinity response" evidence=IGI;RCA]
[GO:0010029 "regulation of seed germination" evidence=IGI]
[GO:2000033 "regulation of seed dormancy process" evidence=IGI]
[GO:0009739 "response to gibberellin stimulus" evidence=IEP]
[GO:0010187 "negative regulation of seed germination" evidence=IGI]
[GO:0010218 "response to far red light" evidence=IEP] [GO:2000377
"regulation of reactive oxygen species metabolic process"
evidence=IGI] [GO:0009863 "salicylic acid mediated signaling
pathway" evidence=IGI;RCA] [GO:0009867 "jasmonic acid mediated
signaling pathway" evidence=IGI;RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010325 "raffinose family oligosaccharide biosynthetic process"
evidence=RCA] [GO:0048444 "floral organ morphogenesis"
evidence=RCA] [GO:0006808 "regulation of nitrogen utilization"
evidence=IMP] Pfam:PF03514 GO:GO:0007275 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009737 GO:GO:0005634 GO:GO:0009723
GO:GO:0003700 GO:GO:0006351 GO:GO:0010218 GO:GO:0010187
GO:GO:0006808 GO:GO:0042538 GO:GO:2000377 EMBL:AC006917
GO:GO:0010233 GO:GO:0040029 GO:GO:0009867 GO:GO:0009863
GO:GO:0009740 EMBL:Y11337 EMBL:Y15193 EMBL:AY058194 EMBL:AY142002
IPI:IPI00535232 PIR:H86282 RefSeq:NP_172945.1 UniGene:At.15032
UniGene:At.75604 PDB:2ZSH PDB:2ZSI PDBsum:2ZSH PDBsum:2ZSI
ProteinModelPortal:Q9LQT8 SMR:Q9LQT8 DIP:DIP-32985N IntAct:Q9LQT8
STRING:Q9LQT8 EnsemblPlants:AT1G14920.1 GeneID:838057
KEGG:ath:AT1G14920 GeneFarm:4235 TAIR:At1g14920 eggNOG:NOG243696
HOGENOM:HOG000238577 InParanoid:Q9LQT8 KO:K14494 OMA:RRVYRFR
PhylomeDB:Q9LQT8 ProtClustDB:CLSN2682993 EvolutionaryTrace:Q9LQT8
Genevestigator:Q9LQT8 GermOnline:AT1G14920 GO:GO:0009938
GO:GO:2000033 InterPro:IPR021914 InterPro:IPR005202 Pfam:PF12041
PROSITE:PS50985 Uniprot:Q9LQT8
Length = 533
Score = 404 (147.3 bits), Expect = 1.1e-37, P = 1.1e-37
Identities = 126/393 (32%), Positives = 192/393 (48%)
Query: 108 VHLLMAAAEALTGVNKSR-ELAQVILIRLKELVSPNDGSNMERLAAYFTDALQGLLEGAG 166
V L+ A V K +A+ ++ ++ L G+ M ++A YF +AL A
Sbjct: 167 VRLVHALLACAEAVQKENLTVAEALVKQIGFLAVSQIGA-MRKVATYFAEAL------AR 219
Query: 167 GVHGNNKHYTSNGPHHRDDHHHTDVLAAFQLLQDMSPYVKFGHFTANQAILEAVANDRRV 226
++ + S P DH +D L + PY+KF HFTANQAILEA +RV
Sbjct: 220 RIY---RLSPSQSPI---DHSLSDTLQMH--FYETCPYLKFAHFTANQAILEAFQGKKRV 271
Query: 227 HIVDYDIMEGIQWASLMQALVSRKDGPPAPHLRITALXXXXXXXXXISTVQETGRRLVAF 286
H++D+ + +G+QW +LMQAL R GPP R+T + + E G +L
Sbjct: 272 HVIDFSMSQGLQWPALMQALALRPGGPPV--FRLTGIGPPAPDN--FDYLHEVGCKLAHL 327
Query: 287 AASIGQPFSFHQCRLDSDETFKASALKLVRGE--ALIINCMLHLPHFSYRAPDSIASFLS 344
A +I F + ++ AS L+L E ++ +N + L H P +I L
Sbjct: 328 AEAIHVEFEYRGFVANTLADLDASMLELRPSEIESVAVNSVFEL-HKLLGRPGAIDKVLG 386
Query: 345 GAKTLNPRLVTLVEEETGPIGDGGFVSRFMDSLHHYSAVYDSLEAGFPMQSRARALVERV 404
+ P + T+VE+E+ F+ RF +SLH+YS ++DSLE G P S ++ V
Sbjct: 387 VVNQIKPEIFTVVEQESNH-NSPIFLDRFTESLHYYSTLFDSLE-GVP--SGQDKVMSEV 442
Query: 405 FLGPRISGSLA-----RIYRTCGEEEVYSWGDWLGVVGFKPVNISFANHCQAKLLLGLFN 459
+LG +I +A R+ R E + W + G GF +I QA +LL LFN
Sbjct: 443 YLGKQICNVVACDGPDRVER---HETLSQWRNRFGSAGFAAAHIGSNAFKQASMLLALFN 499
Query: 460 --DGYRVEELANNRLVLGWKSRRLLSASVWTSS 490
+GYRVEE ++ L+LGW +R L++ S W S
Sbjct: 500 GGEGYRVEE-SDGCLMLGWHTRPLIATSAWKLS 531
>TAIR|locus:2008086 [details] [associations]
symbol:SCL3 "AT1G50420" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0009739 "response to gibberellin
stimulus" evidence=IEP] Pfam:PF03514 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
GO:GO:0009739 EMBL:AC012561 HOGENOM:HOG000238577 InterPro:IPR005202
PROSITE:PS50985 EMBL:AY056154 EMBL:AY091260 EMBL:AF036301
IPI:IPI00539428 PIR:E96540 PIR:T51235 RefSeq:NP_175459.1
UniGene:At.14826 IntAct:Q9LPR8 STRING:Q9LPR8
EnsemblPlants:AT1G50420.1 GeneID:841464 KEGG:ath:AT1G50420
GeneFarm:4258 TAIR:At1g50420 eggNOG:NOG310008 InParanoid:Q9LPR8
OMA:MVHVIDL PhylomeDB:Q9LPR8 ProtClustDB:CLSN2913643
Genevestigator:Q9LPR8 Uniprot:Q9LPR8
Length = 482
Score = 266 (98.7 bits), Expect = 3.0e-35, Sum P(2) = 3.0e-35
Identities = 76/232 (32%), Positives = 119/232 (51%)
Query: 103 KGLRLVHLLMAAAEALTGVNKSRELAQVILIRLKELVSPNDGSNMERLAAYFTDALQG-L 161
+GL L+HLL+ A + + S + A L +L L SP DG M+R+AAYFT+AL +
Sbjct: 50 RGLYLIHLLLTCANHVA--SGSLQNANAALEQLSHLASP-DGDTMQRIAAYFTEALANRI 106
Query: 162 LEGAGGVHGNNKHYTSNGPHHRDDHHHTDVLAAFQLLQDMSPYVKFGHFTANQAILEAVA 221
L+ G++ N R ++ ++ +L +M P +K + N+AILEA+
Sbjct: 107 LKSWPGLYK-----ALNATQTRTNNVSEEIHVR-RLFFEMFPILKVSYLLTNRAILEAME 160
Query: 222 NDRRVHIVDYDIMEGIQWASLMQALVSRKDGPPAPHLRITALXXXXXXXXXISTVQETGR 281
++ VH++D D E QW +L+QA SR +GPP HLRIT + +++
Sbjct: 161 GEKMVHVIDLDASEPAQWLALLQAFNSRPEGPP--HLRITGVHHQK------EVLEQMAH 212
Query: 282 RLVAFAASIGQPFSFHQC--RLDSDETFKASALKLVRGEALIINCMLHLPHF 331
RL+ A + PF F+ RLD L++ GEAL ++ +L L F
Sbjct: 213 RLIEEAEKLDIPFQFNPVVSRLDC---LNVEQLRVKTGEALAVSSVLQLHTF 261
Score = 180 (68.4 bits), Expect = 3.0e-35, Sum P(2) = 3.0e-35
Identities = 47/150 (31%), Positives = 78/150 (52%)
Query: 341 SFLSGAKTLNPRLVTLVEEETGPIGDGGFVSRFMDSLHHYSAVYDSLEAGFPMQSRARAL 400
SFL+ L+P+++ + E+++ G + R ++SL+ Y+A++D LE P S+ R
Sbjct: 331 SFLNAIWGLSPKVMVVTEQDSDHNGST-LMERLLESLYTYAALFDCLETKVPRTSQDRIK 389
Query: 401 VERVFLGPRISG--SLARIYRTCGEEEVYSWGDWLGVVGFKPVNISFANHCQAKLLL-GL 457
VE++ G I S R E++ W + + GF V +S+ QA+ LL G
Sbjct: 390 VEKMLFGEEIKNIISCEGFERRERHEKLEKWSQRIDLAGFGNVPLSYYAMLQARRLLQGC 449
Query: 458 FNDGYRVEELANNRLVLGWKSRRLLSASVW 487
DGYR++E + V+ W+ R L S S W
Sbjct: 450 GFDGYRIKE-ESGCAVICWQDRPLYSVSAW 478
>TAIR|locus:2044973 [details] [associations]
symbol:SCL21 "AT2G04890" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006487 "protein N-linked glycosylation" evidence=RCA]
Pfam:PF03514 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003700 GO:GO:0006351 EMBL:AC006955 EMBL:AC007211
HOGENOM:HOG000238577 InterPro:IPR005202 PROSITE:PS50985
EMBL:AF210732 EMBL:AK175210 EMBL:AK175990 EMBL:AK176099
EMBL:AK221099 EMBL:BT026455 IPI:IPI00534889 PIR:G84462
RefSeq:NP_178566.1 UniGene:At.48419 UniGene:At.71110 IntAct:Q9S7H5
EnsemblPlants:AT2G04890.1 GeneID:815036 KEGG:ath:AT2G04890
GeneFarm:4231 TAIR:At2g04890 eggNOG:NOG292869 InParanoid:Q9S7H5
OMA:HKERINI PhylomeDB:Q9S7H5 ProtClustDB:CLSN2912915
Genevestigator:Q9S7H5 Uniprot:Q9S7H5
Length = 413
Score = 376 (137.4 bits), Expect = 1.1e-34, P = 1.1e-34
Identities = 117/388 (30%), Positives = 197/388 (50%)
Query: 105 LRLVHLLMAAAEALTGVNKSRELAQVILIRLKELVSPNDGSNMERLAAYFTDALQGLLEG 164
L+LV L+A A+A++ N +A+ + L+ +VS + G ++RL AY + L L
Sbjct: 50 LKLV--LVACAKAVSENNLL--MARWCMGELRGMVSIS-GEPIQRLGAYMLEGLVARLAA 104
Query: 165 AGGVHGNNKHYTSNGPHHRDDHHHTDVLAAFQLLQDMSPYVKFGHFTANQAILEAVANDR 224
+G + Y S + + + L+ +L ++ PY KFG+ +AN AI EA+ ++
Sbjct: 105 SG-----SSIYKSLQSREPESY---EFLSYVYVLHEVCPYFKFGYMSANGAIAEAMKDEE 156
Query: 225 RVHIVDYDIMEGIQWASLMQALVSRKDGPPAPHLRITALXXXXXXXXXISTVQETGRRLV 284
R+HI+D+ I +G QW +L+QA +R G AP++RIT + + TV+ +RL
Sbjct: 157 RIHIIDFQIGQGSQWIALIQAFAARPGG--APNIRITGVGDGSV----LVTVK---KRLE 207
Query: 285 AFAASIGQPFSFHQCRLDSDETFKASALKLVRGEALIINC--MLH-LPHFSYRAPDSIAS 341
A PF F+ S E + L + GEAL +N MLH LP S +
Sbjct: 208 KLAKKFDVPFRFNAVSRPSCEV-EVENLDVRDGEALGVNFAYMLHHLPDESVSMENHRDR 266
Query: 342 FLSGAKTLNPRLVTLVEEETGPIGDGGFVSRFMDSLHHYSAVYDSLEAGFPMQSRARALV 401
L K+L+P++VTLVE+E F+ RF+++L +Y+A+++S++ P + R +
Sbjct: 267 LLRMVKSLSPKVVTLVEQECNT-NTSPFLPRFLETLSYYTAMFESIDVMLPRNHKERINI 325
Query: 402 ERVFLGPRISGSLA--RIYRTCGEEEVYSWGDWLGVVGFKPVNISFANHCQAKLLLGLFN 459
E+ + + +A R E + W + GF+P +S + LL ++
Sbjct: 326 EQHCMARDVVNIIACEGAERIERHELLGKWKSRFSMAGFEPYPLSSIISATIRALLRDYS 385
Query: 460 DGYRVEELANNRLVLGWKSRRLLSASVW 487
+GY +EE + L LGW R L+S+ W
Sbjct: 386 NGYAIEE-RDGALYLGWMDRILVSSCAW 412
>TAIR|locus:2015243 [details] [associations]
symbol:AT1G63100 "AT1G63100" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0000226 "microtubule cytoskeleton organization"
evidence=RCA] [GO:0000911 "cytokinesis by cell plate formation"
evidence=RCA] [GO:0048451 "petal formation" evidence=RCA]
[GO:0048453 "sepal formation" evidence=RCA] Pfam:PF03514
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003700
GO:GO:0006351 EMBL:AC010795 InterPro:IPR005202 PROSITE:PS50985
IPI:IPI00520577 PIR:D96656 RefSeq:NP_176498.1 UniGene:At.66082
ProteinModelPortal:Q9CAN3 SMR:Q9CAN3 PRIDE:Q9CAN3
EnsemblPlants:AT1G63100.1 GeneID:842613 KEGG:ath:AT1G63100
GeneFarm:4261 TAIR:At1g63100 eggNOG:NOG286854 HOGENOM:HOG000241666
InParanoid:Q9CAN3 OMA:RTKCENE PhylomeDB:Q9CAN3
ProtClustDB:CLSN2682380 Genevestigator:Q9CAN3 Uniprot:Q9CAN3
Length = 658
Score = 365 (133.5 bits), Expect = 7.6e-33, P = 7.6e-33
Identities = 121/417 (29%), Positives = 190/417 (45%)
Query: 93 VDEETNGEDF-KGLRLVHLLMAAAEALTGVNKSRELAQV--ILIRLKELVSPNDGSNMER 149
++ N D + LV+LL +A+ +SR +A + + R +L SP + M R
Sbjct: 259 INNNNNRNDLQRDFELVNLLTGCLDAI----RSRNIAAINHFIARTGDLASPRGRTPMTR 314
Query: 150 LAAYFTDALQGLLEGAGGVHGNNKHYTSNGPHHRDDHHHTDVLA-AFQLLQDMSPYVKFG 208
L AY+ +AL A V H P D D A + L ++P KF
Sbjct: 315 LIAYYIEAL------ALRVARMWPHIFHIAPPREFDRTVEDESGNALRFLNQVTPIPKFI 368
Query: 209 HFTANQAILEAVANDRRVHIVDYDIMEGIQWASLMQALVSRKDGPPAPHLRITALXXXXX 268
HFTAN+ +L A RVHI+D+DI +G+QW S Q+L SR + PP H+RIT +
Sbjct: 369 HFTANEMLLRAFEGKERVHIIDFDIKQGLQWPSFFQSLASRIN-PPH-HVRITGIGESKL 426
Query: 269 XXXXISTVQETGRRLVAFAASIGQPFSFHQCRLDSDETFKASALKLVRGEALIINCMLHL 328
+ ETG RL FA ++ F FH +D E + L + GE++ +NC++ +
Sbjct: 427 E------LNETGDRLHGFAEAMNLQFEFHPV-VDRLEDVRLWMLHVKEGESVAVNCVMQM 479
Query: 329 PHFSYRAPDS-IASFLSGAKTLNPRLVTLVEEETGPIGDGGFVSRFMDSLHHYSAVYDSL 387
Y + I FL ++ NP + L E+E + +R +SL +YSA++D++
Sbjct: 480 HKTLYDGTGAAIRDFLGLIRSTNPIALVLAEQEAEHNSEQ-LETRVCNSLKYYSAMFDAI 538
Query: 388 EAGFPMQSRARALVERVFLGPRISGSLARIYRTCGEEEV--YSWGDWLGVVGFKPVNISF 445
S R VE + G I +A E V W L +GF+ + +S
Sbjct: 539 HTNLATDSLMRVKVEEMLFGREIRNIVACEGSHRQERHVGFRHWRRMLEQLGFRSLGVSE 598
Query: 446 ANHCQAKLLLGLF---NDGY-RVEELANNR---------LVLGWKSRRLLSASVWTS 489
Q+K+LL ++ N+G+ VE + + L W + L + S WT+
Sbjct: 599 REVLQSKMLLRMYGSDNEGFFNVERSDEDNGGEGGRGGGVTLRWSEQPLYTISAWTT 655
>TAIR|locus:2101801 [details] [associations]
symbol:HAM2 "AT3G60630" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0010492 "maintenance of shoot apical meristem
identity" evidence=IGI] [GO:0030154 "cell differentiation"
evidence=IMP] [GO:0048768 "root hair cell tip growth" evidence=IMP]
[GO:0051301 "cell division" evidence=IMP] [GO:0007020 "microtubule
nucleation" evidence=RCA] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0051301 GO:GO:0003700 GO:GO:0006351
GO:GO:0048768 GO:GO:0010492 EMBL:AL162295 InterPro:IPR005202
PROSITE:PS50985 EMBL:AY064062 EMBL:AY096372 EMBL:EU550731
EMBL:EU550732 EMBL:EU550733 EMBL:EU550734 EMBL:EU550735
EMBL:EU550736 EMBL:EU550737 EMBL:EU550738 EMBL:EU550739
EMBL:EU550740 EMBL:EU550741 EMBL:EU550742 EMBL:EU550743
EMBL:EU550744 EMBL:EU550745 EMBL:EU550746 EMBL:EU550747
EMBL:EU550748 EMBL:EU550749 EMBL:EU550750 EMBL:EU550752
EMBL:EU550754 EMBL:EU550751 EMBL:EU550753 IPI:IPI00520916
PIR:T47874 RefSeq:NP_191622.1 UniGene:At.27084 IntAct:Q9M000
EnsemblPlants:AT3G60630.1 GeneID:825234 KEGG:ath:AT3G60630
GeneFarm:4227 TAIR:At3g60630 eggNOG:NOG261649 HOGENOM:HOG000239326
InParanoid:Q9M000 OMA:ANQTILE PhylomeDB:Q9M000
ProtClustDB:CLSN2683334 Genevestigator:Q9M000 Uniprot:Q9M000
Length = 623
Score = 344 (126.2 bits), Expect = 2.4e-30, P = 2.4e-30
Identities = 119/409 (29%), Positives = 190/409 (46%)
Query: 95 EETNGEDFKGLRLVHLLMAAAEALT-GVNKSRELAQVILIRLKE-LVSPNDGSN------ 146
E+ N +D + + L AAAE T G + + LAQ IL RL L + ND +N
Sbjct: 232 EDQNDQDQSAVIIDQLFSAAAELTTNGGDNNPVLAQGILARLNHNLNNNNDDTNNNPKPP 291
Query: 147 MERLAAYFTDALQGLLEGAGGVHGNNKHYTSNGPHHRDDHHHTDVLAAFQLLQDMSPYVK 206
R A+Y T+AL LL+ + + + P + +AA++ + SP+++
Sbjct: 292 FHRAASYITEALHSLLQDS----------SLSPPSLSPPQNLIFRIAAYRAFSETSPFLQ 341
Query: 207 FGHFTANQAILEAVANDRRVHIVDYDIMEGIQWASLMQALVSRKD-GPPAPHLRITALXX 265
F +FTANQ ILE+ R+HIVD+DI G QWASL+Q L +++ AP L+ITA
Sbjct: 342 FVNFTANQTILESFEGFDRIHIVDFDIGYGGQWASLIQELAGKRNRSSSAPSLKITAFAS 401
Query: 266 XXXXXXXISTVQETGRRLVAFAASIGQPFSFHQCRLDS--DETF-KASALKLVRGEALII 322
++ T L +FA G F ++ + T+ S + EA+ +
Sbjct: 402 PSTVSDEFE-LRFTEENLRSFAGETGVSFEIELLNMEILLNPTYWPLSLFRSSEKEAIAV 460
Query: 323 NCMLHLPHFSYRAPDSIASFLSGAKTLNPRLVTLVEEETGPIGDGGFVSRFMDSLHHYSA 382
N LP S + L K ++P +V + D F + +++L +Y++
Sbjct: 461 N----LP-ISSMVSGYLPLILRFLKQISPNVVVCSDRSCDRNNDAPFPNGVINALQYYTS 515
Query: 383 VYDSLEAGFPMQSRARALVERVFLGPRISGSLARIYRTCGEEEVYSWGDWLGVVGFKPVN 442
+ +SL++G + A +ER + P I L YR E W G GF PV
Sbjct: 516 LLESLDSGNLNNAEAATSIERFCVQPSIQKLLTNRYRWM--ERSPPWRSLFGQCGFTPVT 573
Query: 443 ISFANHCQAKLLLGLFND--GYRVEELANNR--LVLGWKSRRLLSASVW 487
+S QA+ LL N G+ +E+ ++ LVL W+ + L++ S W
Sbjct: 574 LSQTAETQAEYLLQR-NPMRGFHLEKRQSSSPSLVLCWQRKELVTVSAW 621
>TAIR|locus:2026982 [details] [associations]
symbol:SCL1 "AT1G21450" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] Pfam:PF03514 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
EMBL:AC015447 HOGENOM:HOG000238577 InterPro:IPR005202
PROSITE:PS50985 EMBL:AF210731 EMBL:AY045833 EMBL:AY096626
EMBL:AY084492 EMBL:AF036300 IPI:IPI00538394 PIR:E86347 PIR:T51234
RefSeq:NP_173566.1 UniGene:At.14825 ProteinModelPortal:Q9SDQ3
STRING:Q9SDQ3 PaxDb:Q9SDQ3 PRIDE:Q9SDQ3 EnsemblPlants:AT1G21450.1
GeneID:838743 KEGG:ath:AT1G21450 GeneFarm:4232 TAIR:At1g21450
eggNOG:NOG324880 InParanoid:Q9SDQ3 OMA:SINDEWA PhylomeDB:Q9SDQ3
ProtClustDB:CLSN2913658 Genevestigator:Q9SDQ3 Uniprot:Q9SDQ3
Length = 593
Score = 341 (125.1 bits), Expect = 1.3e-29, P = 1.3e-29
Identities = 116/391 (29%), Positives = 186/391 (47%)
Query: 110 LLMAAAEALTGVNKSRELAQVILIRLKELVSPNDGSNMERLAAYFTDALQGLLEGAGG-V 168
+L++ A AL+ L+ V L+++VS G +R+AAY + L + +G +
Sbjct: 225 ILISCARALSEGKLEEALSMVN--ELRQIVSIQ-GDPSQRIAAYMVEGLAARMAASGKFI 281
Query: 169 HGNNKHYTSNGPHHRDDHHHTDVLAAFQLLQDMSPYVKFGHFTANQAILEAVANDRRVHI 228
+ K P D+ LAA Q+L ++ P KFG AN AILEA+ + VHI
Sbjct: 282 YRALK--CKEPPS--DER-----LAAMQVLFEVCPCFKFGFLAANGAILEAIKGEEEVHI 332
Query: 229 VDYDIMEGIQWASLMQALVSRKDGPPAPHLRITALXXXXXXXXXISTVQETGRRLVAFAA 288
+D+DI +G Q+ +L+++ ++ G P LR+T + I ++ G RL A
Sbjct: 333 IDFDINQGNQYMTLIRS-IAELPGK-RPRLRLTGIDDPESVQRSIGGLRIIGLRLEQLAE 390
Query: 289 SIGQPFSFHQCRLDSDETFKASALKLVRGEALIINCML---HLPHFSYRAPDSIASFLSG 345
G F F + S L GE LI+N H+P S + L
Sbjct: 391 DNGVSFKF-KAMPSKTSIVSPSTLGCKPGETLIVNFAFQLHHMPDESVTTVNQRDELLHM 449
Query: 346 AKTLNPRLVTLVEEETGPIGDGGFVSRFMDSLHHYSAVYDSLEAGFPMQSRARALVERVF 405
K+LNP+LVT+VE++ F RF+++ +YSAV++SL+ P +S+ R VER
Sbjct: 450 VKSLNPKLVTVVEQDVNT-NTSPFFPRFIEAYEYYSAVFESLDMTLPRESQERMNVERQC 508
Query: 406 LGPRISGSLARIYRTC-GEEEVYSW---GDW---LGVVGF--KPVNISFANHCQAKLLLG 456
L I +A C GEE + + G W + + GF KP++ N+ Q L+
Sbjct: 509 LARDIVNIVA-----CEGEERIERYEAAGKWRARMMMAGFNPKPMSAKVTNNIQ-NLIKQ 562
Query: 457 LFNDGYRVEELANNRLVLGWKSRRLLSASVW 487
+ + Y+++E L W+ + L+ AS W
Sbjct: 563 QYCNKYKLKE-EMGELHFCWEEKSLIVASAW 592
>TAIR|locus:2120106 [details] [associations]
symbol:SHR "AT4G37650" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS;TAS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0008356 "asymmetric cell division"
evidence=IMP] [GO:0009956 "radial pattern formation" evidence=IMP]
[GO:0032350 "regulation of hormone metabolic process" evidence=NAS]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0055072 "iron ion
homeostasis" evidence=IMP] [GO:0045930 "negative regulation of
mitotic cell cycle" evidence=IMP] [GO:0048366 "leaf development"
evidence=IMP] Pfam:PF03514 GO:GO:0005634 GO:GO:0005737
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 GO:GO:0007049 EMBL:AL035605 EMBL:AL161591
GO:GO:0048366 GO:GO:0008356 GO:GO:0055072 GO:GO:0009956
GO:GO:0032350 InterPro:IPR005202 PROSITE:PS50985 EMBL:AF233752
EMBL:BT033026 EMBL:AY074547 IPI:IPI00525426 PIR:T04722
RefSeq:NP_195480.1 UniGene:At.2816 UniGene:At.71893 IntAct:Q9SZF7
STRING:Q9SZF7 PaxDb:Q9SZF7 PRIDE:Q9SZF7 EnsemblPlants:AT4G37650.1
GeneID:829919 KEGG:ath:AT4G37650 GeneFarm:4260 TAIR:At4g37650
eggNOG:NOG301144 HOGENOM:HOG000078767 InParanoid:Q9SZF7 OMA:EIGNRME
PhylomeDB:Q9SZF7 ProtClustDB:CLSN2685807 Genevestigator:Q9SZF7
Uniprot:Q9SZF7
Length = 531
Score = 331 (121.6 bits), Expect = 3.1e-28, P = 3.1e-28
Identities = 117/394 (29%), Positives = 179/394 (45%)
Query: 110 LLMAAAEALTGVNKSRELAQVILIRLKELVSPNDGSNMERLAAYFTDALQGLLEGAGGVH 169
+L+ AA A + + +R AQ IL L EL SP G ++LA+YF AL + G+G
Sbjct: 146 VLLEAARAFSDKDTAR--AQQILWTLNELSSPY-GDTEQKLASYFLQALFNRMTGSGE-R 201
Query: 170 GNNKHYTSNGPHHRDDHHHT-DVLAAFQLLQDMSPYVKFGHFTANQAILEAVANDRRVHI 228
T+ T + FQ ++SP+ FGH AN AILEAV + ++HI
Sbjct: 202 CYRTMVTAAATEKTCSFESTRKTVLKFQ---EVSPWATFGHVAANGAILEAVDGEAKIHI 258
Query: 229 VDYDIMEGIQWASLMQALVSRKDGPPAPHLRITALXXXXXXXXXIST----VQETGRRLV 284
VD QW +L++AL +R D PHLR+T + + ++E G R+
Sbjct: 259 VDISSTFCTQWPTLLEALATRSDD--TPHLRLTTVVVANKFVNDQTASHRMMKEIGNRME 316
Query: 285 AFAASIGQPFSFHQCRLDSD-ETFKASALKLVRGEALIINCMLHLPHFSYRAPDSIASFL 343
FA +G PF F+ D F + L + E L INC+ + + R A +
Sbjct: 317 KFARLMGVPFKFNIIHHVGDLSEFDLNELDVKPDEVLAINCVGAMHGIASRGSPRDA-VI 375
Query: 344 SGAKTLNPRLVTLVEEETGPIGD--GGFVSRFM----DSLHHYSAVYDSLEAGFPMQSRA 397
S + L PR+VT+VEEE +G+ GGF F+ + L + ++S E FP S
Sbjct: 376 SSFRRLRPRIVTVVEEEADLVGEEEGGFDDEFLRGFGECLRWFRVCFESWEESFPRTSNE 435
Query: 398 RALVERVFLGPRISGSLARIYRTCGE--EEVYSWGDWLGVVGFKPVNISFANHCQAKLLL 455
R ++ER G I +A E E W + GF V S + LL
Sbjct: 436 RLMLERA-AGRAIVDLVACEPSDSTERRETARKWSRRMRNSGFGAVGYSDEVADDVRALL 494
Query: 456 GLFNDG-YRVEELANNR-LVLGWKSRRLLSASVW 487
+ +G + + + + + L W+ + ++ AS W
Sbjct: 495 RRYKEGVWSMVQCPDAAGIFLCWRDQPVVWASAW 528
>TAIR|locus:2148293 [details] [associations]
symbol:AT5G59450 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0010200 "response to chitin" evidence=IEP;RCA]
Pfam:PF03514 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0003700 GO:GO:0006351 GO:GO:0010200 EMBL:AB025604
InterPro:IPR005202 PROSITE:PS50985 EMBL:AY035001 EMBL:AY062942
EMBL:AF036307 IPI:IPI00541926 PIR:T51233 RefSeq:NP_200753.1
UniGene:At.29225 UniGene:At.63919 UniGene:At.72775 STRING:Q9LTI5
EnsemblPlants:AT5G59450.1 GeneID:836064 KEGG:ath:AT5G59450
GeneFarm:4255 TAIR:At5g59450 eggNOG:NOG254902 HOGENOM:HOG000238576
InParanoid:Q9LTI5 OMA:KPATISK PhylomeDB:Q9LTI5
ProtClustDB:CLSN2685117 Genevestigator:Q9LTI5 Uniprot:Q9LTI5
Length = 610
Score = 329 (120.9 bits), Expect = 1.1e-27, P = 1.1e-27
Identities = 115/404 (28%), Positives = 181/404 (44%)
Query: 110 LLMAAAEALTGVNKSRELAQVILIRLKELVSPNDGSNMERLAAYFTDALQGLLEGAGGVH 169
LL A+A+ ++ R ++ IR S ++G +RLA YF +AL+ + G
Sbjct: 227 LLTQCAQAVASFDQRRATDKLKEIRAH---SSSNGDGTQRLAFYFAEALEARITG----- 278
Query: 170 GNNKHYTSNGPHHRDDHHHTDVLAAFQLLQDMSPYVKFGHFTANQAILEAVANDRRVHIV 229
N SN P D+L A++L P +F AN++I E ++HIV
Sbjct: 279 -NISPPVSN-PFPSSTTSMVDILKAYKLFVHTCPIYVTDYFAANKSIYELAMKATKLHIV 336
Query: 230 DYDIMEGIQWASLMQALVSRKDGPPAPHLRITALXXXXXXXXXISTVQETGRRLVAFAAS 289
D+ ++ G QW L++AL R GPP LR+T + V+ETGRRL F
Sbjct: 337 DFGVLYGFQWPCLLRALSKRPGGPPM--LRVTGIELPQAGFRPSDRVEETGRRLKRFCDQ 394
Query: 290 IGQPFSFHQCRLDSDETFKASALKLVRGEALIINCMLHLPHFSYRAPDSIASFLSGAKT- 348
PF F+ ET L + GE ++NC+ L + PD S S T
Sbjct: 395 FNVPFEFNFIA-KKWETITLDELMINPGETTVVNCIHRLQY----TPDETVSLDSPRDTV 449
Query: 349 ------LNPRLVTLVEEETGPIGDGGFVSRFMDSLHHYSAVYDSLEAGFPMQS--RARAL 400
+NP L E G F++RF ++L HYS+++D + + + R+L
Sbjct: 450 LKLFRDINPDLFVFAEIN-GMYNSPFFMTRFREALFHYSSLFDMFDTTIHAEDEYKNRSL 508
Query: 401 VERVFLGPRISGSLARIYRTC-GEE-----EVYS-WGDWLGVVGFKPVNISFANHCQAK- 452
+ER L + +++ I +C G E E Y W + GFKP IS +AK
Sbjct: 509 LERELL---VRDAMSVI--SCEGAERFARPETYKQWRVRILRAGFKPATISKQIMKEAKE 563
Query: 453 LLLGLFNDGYRVEELANNRLVLGWKSRRLLSASVW--TSSFDSN 494
++ ++ + ++ NN ++ GWK R + + S W F +N
Sbjct: 564 IVRKRYHRDFVIDS-DNNWMLQGWKGRVIYAFSCWKPAEKFTNN 606
>TAIR|locus:2025022 [details] [associations]
symbol:SCL14 "SCARECROW-like 14" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0005829 "cytosol" evidence=IDA]
[GO:0009410 "response to xenobiotic stimulus" evidence=IMP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IMP] [GO:0000956 "nuclear-transcribed mRNA catabolic
process" evidence=RCA] [GO:0006486 "protein glycosylation"
evidence=RCA] Pfam:PF03514 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005829 GO:GO:0005634 GO:GO:0045893 GO:GO:0003700
GO:GO:0006351 GO:GO:0009410 EMBL:AC022464 InterPro:IPR005202
PROSITE:PS50985 HOGENOM:HOG000238576 EMBL:AF036309 IPI:IPI00525012
PIR:T51232 RefSeq:NP_172233.1 UniGene:At.21921 STRING:Q9XE58
PaxDb:Q9XE58 PRIDE:Q9XE58 EnsemblPlants:AT1G07530.1 GeneID:837267
KEGG:ath:AT1G07530 GeneFarm:4250 TAIR:At1g07530 eggNOG:NOG319005
OMA:HEDFVVD PhylomeDB:Q9XE58 Genevestigator:Q9XE58 Uniprot:Q9XE58
Length = 769
Score = 330 (121.2 bits), Expect = 1.6e-27, P = 1.6e-27
Identities = 110/392 (28%), Positives = 183/392 (46%)
Query: 110 LLMAAAEALTGVNKSRELAQVILIRLKELVSPNDGSNMERLAAYFTDALQGLLEGAGGVH 169
LL+ A+A++ V+ R A +L +++E SP G+ ERLA YF ++L+ L G G
Sbjct: 396 LLVLCAQAVS-VD-DRRTANEMLRQIREHSSPL-GNGSERLAHYFANSLEARLAGTG--- 449
Query: 170 GNNKHYTSNGPHHRDDHHHTDVLAAFQLLQDMSPYVKFGHFTANQAILEAVANDRRVHIV 229
+ YT+ D+L A+Q + P+ K AN +++ AN +HI+
Sbjct: 450 --TQIYTALSSKKTSA---ADMLKAYQTYMSVCPFKKAAIIFANHSMMRFTANANTIHII 504
Query: 230 DYDIMEGIQWASLMQAL-VSRKDGPPAPHLRITALXXXXXXXXXISTVQETGRRLVAFAA 288
D+ I G QW +L+ L +SR G +P LRIT + VQETG RL +
Sbjct: 505 DFGISYGFQWPALIHRLSLSRPGG--SPKLRITGIELPQRGFRPAEGVQETGHRLARYCQ 562
Query: 289 SIGQPFSFHQCRLDSDETFKASALKLVRGEALIINCMLHLPHFS-----YRAP-DSIASF 342
PF ++ ET + LKL +GE +++N + + +P D++
Sbjct: 563 RHNVPFEYNAIA-QKWETIQVEDLKLRQGEYVVVNSLFRFRNLLDETVLVNSPRDAVLKL 621
Query: 343 LSGAKTLNPRLVTLVEEETGPIGDGGFVSRFMDSLHHYSAVYDSLEAGFPMQSRARALVE 402
+ + +NP V + +G FV+RF ++L HYSAV+D ++ + R + E
Sbjct: 622 I---RKINPN-VFIPAILSGNYNAPFFVTRFREALFHYSAVFDMCDSKLAREDEMRLMYE 677
Query: 403 RVFLGPRISGSLA-RIYRTCGEEEVYS-WGDWLGVVGFK--PVNISFANHCQAKLLLGLF 458
+ F G I +A E Y W L GF+ P+ + + K+ G +
Sbjct: 678 KEFYGREIVNVVACEGTERVERPETYKQWQARLIRAGFRQLPLEKELMQNLKLKIENG-Y 736
Query: 459 NDGYRVEELANNRLVLGWKSRRLLSASVWTSS 490
+ + V++ N L+ GWK R + ++S+W S
Sbjct: 737 DKNFDVDQ-NGNWLLQGWKGRIVYASSLWVPS 767
>TAIR|locus:2025032 [details] [associations]
symbol:AT1G07520 "AT1G07520" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0010200 "response to chitin" evidence=IEP;RCA] [GO:0002679
"respiratory burst involved in defense response" evidence=RCA]
[GO:0035556 "intracellular signal transduction" evidence=RCA]
Pfam:PF03514 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0006355 GO:GO:0006351 GO:GO:0010200 EMBL:AC022464
InterPro:IPR005202 PROSITE:PS50985 PIR:T51232 eggNOG:NOG319005
EMBL:AB493440 EMBL:BX839686 IPI:IPI00525480 IPI:IPI01019456
RefSeq:NP_172232.1 UniGene:At.63938 UniGene:At.71785 STRING:Q3EDH0
PRIDE:Q3EDH0 GeneID:837266 KEGG:ath:AT1G07520 GeneFarm:4253
TAIR:At1g07520 InParanoid:Q3EDH0 OMA:VRIENEV Genevestigator:Q3EDH0
Uniprot:Q3EDH0
Length = 695
Score = 327 (120.2 bits), Expect = 3.1e-27, P = 3.1e-27
Identities = 106/389 (27%), Positives = 172/389 (44%)
Query: 110 LLMAAAEALTGVNKSRELAQVILIRLKELVSPNDGSNMERLAAYFTDALQGLLEGAGGVH 169
LL A++++ +K A +L ++++ SP G +RLA +F +AL+ LEG+ G
Sbjct: 318 LLTLCAQSVSAGDKIT--ADDLLRQIRKQCSPV-GDASQRLAHFFANALEARLEGSTGTM 374
Query: 170 GNNKHYTSNGPHHRDDHHHTDVLAAFQLLQDMSPYVKFGHFTANQAILEAVANDRRVHIV 229
+ +Y S R +L ++ + SP++ +F +N+ IL+A + +HIV
Sbjct: 375 IQS-YYDSISSKKRTA---AQILKSYSVFLSASPFMTLIYFFSNKMILDAAKDASVLHIV 430
Query: 230 DYDIMEGIQWASLMQALVSRKDGPPAPHLRITALXXXXXXXXXISTVQETGRRLVAFAAS 289
D+ I+ G QW +Q L K P LRIT + +Q+TGRRL +
Sbjct: 431 DFGILYGFQWPMFIQHL--SKSNPGLRKLRITGIEIPQHGLRPTERIQDTGRRLTEYCKR 488
Query: 290 IGQPFSFHQCRLDSDETFKASALKLVRGEALIINCMLHLPHFSYRAPDSIA----SFLSG 345
G PF ++ + ET K K+ E L +N +L + P FL
Sbjct: 489 FGVPFEYNAIASKNWETIKMEEFKIRPNEVLAVNAVLRFKNLRDVIPGEEDCPRDGFLKL 548
Query: 346 AKTLNPRLVTLVEEETGPIGDGGFVSRFMDSLHHYSAVYDSLEAGFPMQSRARALVERVF 405
+ +NP V L G F +RF ++L HYSA++D A ++ R E F
Sbjct: 549 IRDMNPN-VFLSSTVNGSFNAPFFTTRFKEALFHYSALFDLFGATLSKENPERIHFEGEF 607
Query: 406 LGPRISGSLA--RIYRTCGEEEVYSWGDWLGVVGFK--PVNISFANHCQAKLLLGLFNDG 461
G + +A + R E W + GFK PV + K+ ++
Sbjct: 608 YGREVMNVIACEGVDRVERPETYKQWQVRMIRAGFKQKPVEAELVQLFREKMKKWGYHKD 667
Query: 462 YRVEELANNRLVLGWKSRRLLSASVWTSS 490
+ ++E +N + GWK R L S+S W S
Sbjct: 668 FVLDE-DSNWFLQGWKGRILFSSSCWVPS 695
>TAIR|locus:2115340 [details] [associations]
symbol:HAM4 "AT4G36710" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0030154 "cell differentiation" evidence=IMP]
[GO:0048831 "regulation of shoot system development" evidence=IGI]
Pfam:PF03514 GO:GO:0005634 GO:GO:0030154 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003700 GO:GO:0006351 GO:GO:0048831
EMBL:AL161589 EMBL:Z99708 InterPro:IPR005202 PROSITE:PS50985
EMBL:AK118497 IPI:IPI00538111 PIR:E85433 RefSeq:NP_195389.4
UniGene:At.31304 PaxDb:O23210 PRIDE:O23210 DNASU:829824
EnsemblPlants:AT4G36710.1 GeneID:829824 KEGG:ath:AT4G36710
GeneFarm:4264 TAIR:At4g36710 eggNOG:NOG271584 HOGENOM:HOG000090733
InParanoid:O23210 OMA:ELVLCWH ProtClustDB:CLSN2717261
Genevestigator:O23210 Uniprot:O23210
Length = 486
Score = 312 (114.9 bits), Expect = 5.6e-26, P = 5.6e-26
Identities = 109/371 (29%), Positives = 173/371 (46%)
Query: 126 ELAQVILIRLKELVSPNDGSNMERLAAYFTDALQGLLEGAGGVHGNNKHYTSNGPHHRDD 185
+LAQV+L RL + + G ++R A YF +AL L G+ N S+
Sbjct: 139 QLAQVVLSRLNQRLRSPAGRPLQRAAFYFKEALGSFLTGSN----RNPIRLSSWSEI--- 191
Query: 186 HHHTDVLAAFQLLQDMSPYVKFGHFTANQAILEAVANDRR---VHIVDYDIMEGIQWASL 242
+ A + +SP F HFTANQAIL+++++ VH+VD++I G Q+ASL
Sbjct: 192 ---VQRIRAIKEYSGISPIPLFSHFTANQAILDSLSSQSSSPFVHVVDFEIGFGGQYASL 248
Query: 243 MQALVSRKDGPPAPHLRITALXXXXXXXXXISTVQETGRRLVAFAASIGQPFSFHQCRLD 302
M+ + + LR+TA+ V+E L FAA + F +
Sbjct: 249 MREITEKSVS--GGFLRVTAVVAEECAVET-RLVKEN---LTQFAAEMKIRFQIEFVLMK 302
Query: 303 SDETFKASALKLVRGEALIINCMLHLPHFSYRAPDSIASFLSGAKTLNPRLVTLVEEE-- 360
+ E A++ V GE ++ L P +R I F++ + ++P++V V+ E
Sbjct: 303 TFEMLSFKAIRFVEGERTVV---LISPAI-FRRLSGITDFVNNLRRVSPKVVVFVDSEGW 358
Query: 361 TGPIGDGGFVSRFMDSLHHYSAVYDSLEAGFPMQSRARALVERVFLGPRISGSL--ARIY 418
T G G F F+ +L Y+ V +SL+A P + +VE L P+IS ++ A
Sbjct: 359 TEIAGSGSFRREFVSALEFYTMVLESLDAAAPPGDLVKKIVEAFVLRPKISAAVETAADR 418
Query: 419 RTCGEEEVYSWGDWLGVVGFKPVNIS-FANHCQAKLLLGLFN-DGYRVEELANNRLVLGW 476
R GE +W + G +P+ +S FA+ QA+ LL G+ V + LVL W
Sbjct: 419 RHTGE---MTWREAFCAAGMRPIQLSQFADF-QAECLLEKAQVRGFHVAK-RQGELVLCW 473
Query: 477 KSRRLLSASVW 487
R L++ S W
Sbjct: 474 HGRALVATSAW 484
>TAIR|locus:2075155 [details] [associations]
symbol:AT3G46600 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0016671 "oxidoreductase
activity, acting on a sulfur group of donors, disulfide as
acceptor" evidence=IEA] [GO:0019538 "protein metabolic process"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010200 "response to chitin" evidence=IEP;RCA] [GO:0002679
"respiratory burst involved in defense response" evidence=RCA]
[GO:0035556 "intracellular signal transduction" evidence=RCA]
Pfam:PF03514 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0003700 GO:GO:0006351 GO:GO:0010200 EMBL:AL133314
InterPro:IPR005202 PROSITE:PS50985 HOGENOM:HOG000238576
ProtClustDB:CLSN2685117 EMBL:AK226419 EMBL:AY087418 IPI:IPI00537144
PIR:T45597 RefSeq:NP_190244.1 UniGene:At.595 STRING:Q9SNB8
EnsemblPlants:AT3G46600.1 GeneID:823813 KEGG:ath:AT3G46600
GeneFarm:4254 TAIR:At3g46600 eggNOG:NOG304481 InParanoid:Q9SNB8
OMA:FNESESQ PhylomeDB:Q9SNB8 Genevestigator:Q9SNB8 Uniprot:Q9SNB8
Length = 583
Score = 290 (107.1 bits), Expect = 5.8e-23, P = 5.8e-23
Identities = 105/389 (26%), Positives = 165/389 (42%)
Query: 109 HLLMAAAEALTGVNKSRELAQVILIRLKELVSPNDGSNMERLAAYFTDALQGLLEGAGGV 168
+LLM A+A+ ++ R ++ IR S G +RL +F +AL+ + G
Sbjct: 211 NLLMQCAQAVASFDQRRAFEKLKEIREH---SSRHGDATQRLGYHFAEALEARITGTMTT 267
Query: 169 HGNNKHYTSNGPHHRDDHHHTDVLAAFQLLQDMSPYVKFGHFTANQAILEAVANDRRVHI 228
+ TS+ R D+L A++ P + +FTAN+ I E + +HI
Sbjct: 268 PISA---TSS----RTSM--VDILKAYKGFVQACPTLIMCYFTANRTINELASKATTLHI 318
Query: 229 VDYDIMEGIQWASLMQALVSRKDGPPAPHLRITALXXXXXXXXXISTVQETGRRLVAFAA 288
+D+ I+ G QW L+QAL R GPP LR+T + V+ETGRRL F
Sbjct: 319 IDFGILYGFQWPCLIQALSKRDIGPPL--LRVTGIELPQSGFRPSERVEETGRRLKRFCD 376
Query: 289 SIGQPFSFHQCRLDSDETFKASALKLVRGEALIINCMLHLPHFSYRAPDSIASFLSGAKT 348
PF + + E L + GE ++NC+L L + PD S S T
Sbjct: 377 KFNVPFEYSFIAKNW-ENITLDDLVINSGETTVVNCILRLQY----TPDETVSLNSPRDT 431
Query: 349 -------LNPRLVTLVEEETGPIGDGGFVSRFMDSLHHYSAVYDSLEAGFPMQSRARALV 401
+NP L E G F++RF ++L H S+++D E R LV
Sbjct: 432 ALKLFRDINPDLFVFAEIN-GTYNSPFFLTRFREALFHCSSLFDMYETTLSEDDNCRTLV 490
Query: 402 ER-VFLGPRISGSLARIYRTCGEEEVYS-WGDWLGVVGFKPVNISFANHCQAK-LLLGLF 458
ER + + +S E Y W + GF+P +S K ++ +
Sbjct: 491 ERELIIRDAMSVIACEGSERFARPETYKQWQVRILRAGFRPAKLSKQIVKDGKEIVKERY 550
Query: 459 NDGYRVEELANNRLVLGWKSRRLLSASVW 487
+ + ++ N+ + GWK R L + S W
Sbjct: 551 HKDFVIDN-DNHWMFQGWKGRVLYAVSCW 578
>UNIPROTKB|Q84MM9 [details] [associations]
symbol:MOC1 "Protein MONOCULM 1" species:39947 "Oryza
sativa Japonica Group" [GO:0005634 "nucleus" evidence=IDA]
[GO:0010014 "meristem initiation" evidence=IMP] Pfam:PF03514
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 InterPro:IPR005202
PROSITE:PS50985 EMBL:AY242058 EMBL:AP003616 Gramene:Q84MM9
eggNOG:NOG323432 GO:GO:0010014 Uniprot:Q84MM9
Length = 441
Score = 282 (104.3 bits), Expect = 1.4e-22, P = 1.4e-22
Identities = 113/378 (29%), Positives = 161/378 (42%)
Query: 110 LLMAAAEALT--GVNKSRELAQVILIRLKELVSPNDGSNMERLAAYFTDALQGLLEGAGG 167
LL+A A+ L + +R A+++L SP G +RLA +F AL ++ G
Sbjct: 53 LLLACADLLQRGDLPAARRAAEIVLAAA---ASPR-GDAADRLAYHFARALALRVDAKAG 108
Query: 168 VHGNNKHYTSNGPHHRDDHHHTDVLAAFQLLQDMSPYVKFGHFTANQAILEAVANDRRVH 227
HG H G R A+ ++P+++F H TANQAILEAV RRVH
Sbjct: 109 -HG---HVVVGGGAARPASS-----GAYLAFNQIAPFLRFAHLTANQAILEAVDGARRVH 159
Query: 228 IVDYDIMEGIQWASLMQALVSRKD---GPPAPHLRITALXXXXXXXXXISTVQETGRRLV 284
I+D D + G+QW L+QA+ R D GPP +R+T T+ TG RL
Sbjct: 160 ILDLDAVHGVQWPPLLQAIAERADPALGPP--EVRVTGAGADR------DTLLRTGNRLR 211
Query: 285 AFAASIGQPFSF-------------HQCRLDSDETFKASALKLVRG------EALIINCM 325
AFA SI PF F H + AS G E L +NC+
Sbjct: 212 AFARSIHLPFHFTPLLLSCATTAPHHVAGTSTGAAAAASTAAAATGLEFHPDETLAVNCV 271
Query: 326 LHLPHFSYRAPDSIASFLSGAKTLNPRLVTLVEEETGPIGDGGFVSRFMDSLHHYSAVYD 385
+ L + + D +A+FL K ++P +VT+ E E G G GG D D
Sbjct: 272 MFLHNLA--GHDELAAFLKWVKAMSPAVVTIAEREAGGGGGGG--DHIDDLPRRVGVAMD 327
Query: 386 SLEAGFP-MQSRAR-ALVERVFLGPRISGSL--ARIYRTCGE--EEVYSWGDWLGVVGFK 439
A F +++ ER+ + + G A + + G + WG GF
Sbjct: 328 HYSAVFEALEATVPPGSRERLAVEQEVLGREIEAAVGPSGGRWWRGIERWGGAARAAGFA 387
Query: 440 PVNISFANHCQAKLLLGL 457
+S QA+LLL L
Sbjct: 388 ARPLSAFAVSQARLLLRL 405
Score = 229 (85.7 bits), Expect = 2.5e-16, P = 2.5e-16
Identities = 69/193 (35%), Positives = 98/193 (50%)
Query: 309 ASALKLVRGEALIINCMLHLPHFSYRAPDSIASFLSGAKTLNPRLVTLVEEETGPIGDGG 368
A+ L+ E L +NC++ L + + D +A+FL K ++P +VT+ E E G G GG
Sbjct: 255 ATGLEFHPDETLAVNCVMFLHNLA--GHDELAAFLKWVKAMSPAVVTIAEREAGGGGGGG 312
Query: 369 -----FVSRFMDSLHHYSAVYDSLEAGFPMQSRARALVERVFLGPRISGSLA----RIYR 419
R ++ HYSAV+++LEA P SR R VE+ LG I ++ R +R
Sbjct: 313 DHIDDLPRRVGVAMDHYSAVFEALEATVPPGSRERLAVEQEVLGREIEAAVGPSGGRWWR 372
Query: 420 TCGEEEVYSWGDWLGVVGFKPVNISFANHCQAKLLLGLF--NDGYRVEELANNRLVLGWK 477
G E WG GF +S QA+LLL L ++GY V+E A LGW+
Sbjct: 373 --GIER---WGGAARAAGFAARPLSAFAVSQARLLLRLHYPSEGYLVQE-ARGACFLGWQ 426
Query: 478 SRRLLSASVWTSS 490
+R LLS S W S
Sbjct: 427 TRPLLSVSAWQPS 439
>UNIPROTKB|Q6DLS1 [details] [associations]
symbol:SCL1 "SCARECROW-like protein" species:3708 "Brassica
napus" [GO:0005515 "protein binding" evidence=IPI] Pfam:PF03514
GO:GO:0006355 GO:GO:0006351 InterPro:IPR005202 PROSITE:PS50985
EMBL:AY664405 IntAct:Q6DLS1 Uniprot:Q6DLS1
Length = 461
Score = 283 (104.7 bits), Expect = 1.5e-22, P = 1.5e-22
Identities = 92/305 (30%), Positives = 146/305 (47%)
Query: 192 LAAFQLLQDMSPYVKFGHFTANQAILEAVANDRR---VHIVDYDIMEGIQWASLMQALVS 248
+ A + +SP F HFTANQAIL+++++ VH+VD++I G Q+ASLM+ +
Sbjct: 170 IRAIKEFSGISPIPLFSHFTANQAILDSLSSQSSSPFVHVVDFEIGFGGQYASLMREIAE 229
Query: 249 RKDGPPAPHLRITALXXXXXXXXXISTVQETGRRLVAFAASIGQPFSFHQCRLDSDETFK 308
+ LR+TA+ V+E L FAA + F + + E
Sbjct: 230 KSAN--GGFLRVTAVVAEDCAVET-RLVKEN---LTQFAAEMKIRFQIEFVLMKTFEILS 283
Query: 309 ASALKLVRGEALIINCMLHLPHFSYRAPDSIASFLSGAKTLNPRLVTLVEEE--TGPIGD 366
A++ V GE ++ L P +R IA F++ ++P +V V+ E T G
Sbjct: 284 FKAIRFVDGERTVV---LISPAI-FRRVIGIAEFVNNLGRVSPNVVVFVDSEGCTETAGS 339
Query: 367 GGFVSRFMDSLHHYSAVYDSLEAGFPMQSRARALVERVFLGPRISGSL--ARIYRTCGEE 424
G F F+ + Y+ V +SL+A P + +VE L P+IS ++ A R+ G+
Sbjct: 340 GSFRREFVSAFEFYTMVLESLDAAAPPGDLVKKIVETFLLRPKISAAVETAANRRSAGQ- 398
Query: 425 EVYSWGDWLGVVGFKPVNIS-FANHCQAKLLLGLFN-DGYRVEELANNRLVLGWKSRRLL 482
+W + L G +PV +S FA+ QA+ LL G+ V + LVL W R L+
Sbjct: 399 --MTWREMLCAAGMRPVQLSQFADF-QAECLLEKAQVRGFHVAK-RQGELVLCWHGRALV 454
Query: 483 SASVW 487
+ S W
Sbjct: 455 ATSAW 459
Score = 162 (62.1 bits), Expect = 9.0e-09, P = 9.0e-09
Identities = 56/199 (28%), Positives = 94/199 (47%)
Query: 127 LAQVILIRLKELVSPNDGSNMERLAAYFTDALQGLLEGAGGVHGNNKHYTSNGPHHRDDH 186
LA V+L +L + + + G ++R A YF +AL LL G N+ ++ + +
Sbjct: 117 LAHVVLSQLNQRLQTSAGRPLQRAAFYFKEALGSLLTGTN----RNQLFSWSDIVQK--- 169
Query: 187 HHTDVLAAFQLLQDMSPYVKFGHFTANQAILEAVANDRR---VHIVDYDIMEGIQWASLM 243
+ A + +SP F HFTANQAIL+++++ VH+VD++I G Q+ASLM
Sbjct: 170 -----IRAIKEFSGISPIPLFSHFTANQAILDSLSSQSSSPFVHVVDFEIGFGGQYASLM 224
Query: 244 QALVSRKDGPPAPHLRITALXXXXXXXXXISTVQETGRRLVAFAASIGQPFSFHQCRLDS 303
+ + + LR+TA+ V+E L FAA + F + +
Sbjct: 225 REIAEKSAN--GGFLRVTAVVAEDCAVET-RLVKEN---LTQFAAEMKIRFQIEFVLMKT 278
Query: 304 DETFKASALKLVRGEALII 322
E A++ V GE ++
Sbjct: 279 FEILSFKAIRFVDGERTVV 297
>TAIR|locus:2040701 [details] [associations]
symbol:AT2G37650 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] EMBL:AC004684 Pfam:PF03514 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003700 GO:GO:0006351
InterPro:IPR005202 PROSITE:PS50985 HOGENOM:HOG000238576
eggNOG:NOG319005 EMBL:AF036306 IPI:IPI00536640 PIR:T02531
PIR:T51240 RefSeq:NP_181301.1 UniGene:At.26205 UniGene:At.66411
PaxDb:O80933 PRIDE:O80933 EnsemblPlants:AT2G37650.1 GeneID:818342
KEGG:ath:AT2G37650 GeneFarm:4256 TAIR:At2g37650 InParanoid:O80933
OMA:WERVERP PhylomeDB:O80933 ProtClustDB:CLSN2912903
Genevestigator:O80933 Uniprot:O80933
Length = 718
Score = 276 (102.2 bits), Expect = 4.0e-21, P = 4.0e-21
Identities = 104/389 (26%), Positives = 170/389 (43%)
Query: 110 LLMAAAEALTGVNKSRELAQVILIRLKELVSPNDGSNMERLAAYFTDALQGLLEGAGG-V 168
LL+ A+A+ R A +L +++ L S G +RLA F + L+ L G G +
Sbjct: 347 LLIHCAQAVAA--DDRRCAGQLLKQIR-LHSTPFGDGNQRLAHCFANGLEARLAGTGSQI 403
Query: 169 HGNNKHYTSNGPHHRDDHHHTDVLAAFQLLQDMSPYVKFGHFTANQAILEAVANDRRVHI 228
+ K S P VL A QL P+ K +F N+ I + V N +RVH+
Sbjct: 404 Y---KGIVSK-PRSA-----AAVLKAHQLFLACCPFRKLSYFITNKTIRDLVGNSQRVHV 454
Query: 229 VDYDIMEGIQWASLMQALVSRKDGPPAPHLRITALXXXXXXXXXISTVQETGRRLVAFAA 288
+D+ I+ G QW +L + R +P +RIT + V+ETG+RL A+A
Sbjct: 455 IDFGILYGFQWPTL----IHRFSMYGSPKVRITGIEFPQPGFRPAQRVEETGQRLAAYAK 510
Query: 289 SIGQPFSFHQCRLDSDETFKASALKLVRGEALIINCMLHLPHF---SYRAPDSIASFLSG 345
G PF + D + L + R E ++NC+ + S + + L+
Sbjct: 511 LFGVPFEYKAIAKKWD-AIQLEDLDIDRDEITVVNCLYRAENLHDESVKVESCRDTVLNL 569
Query: 346 AKTLNPRLVTLVEEETGPIGDGGFVSRFMDSLHHYSAVYDSLEAGFPMQSRARALVERVF 405
+NP L G FV+RF ++L H+S+++D LE P + R +E
Sbjct: 570 IGKINPDLFVF-GIVNGAYNAPFFVTRFREALFHFSSIFDMLETIVPREDEERMFLEMEV 628
Query: 406 LGPRISGSLA-----RIYR--TCGEEEVYSWGDWLGVVGFKPVNISFANHCQAKLLLGLF 458
G +A R+ R T + V + L V F P + + H K+ +
Sbjct: 629 FGREALNVIACEGWERVERPETYKQWHVRAMRSGLVQVPFDPSIMKTSLH---KVHT-FY 684
Query: 459 NDGYRVEELANNRLVLGWKSRRLLSASVW 487
+ + +++ N L+ GWK R +++ SVW
Sbjct: 685 HKDFVIDQ-DNRWLLQGWKGRTVMALSVW 712
>TAIR|locus:2126901 [details] [associations]
symbol:HAM3 "AT4G00150" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0010492 "maintenance of shoot apical meristem identity"
evidence=IGI] [GO:0030154 "cell differentiation" evidence=IMP]
[GO:0048768 "root hair cell tip growth" evidence=IMP] [GO:0051301
"cell division" evidence=IMP] [GO:0007623 "circadian rhythm"
evidence=IEP] Pfam:PF03514 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0051301 GO:GO:0007623 GO:GO:0003700
GO:GO:0006351 GO:GO:0048768 GO:GO:0010492 EMBL:AL161471
EMBL:AF069299 InterPro:IPR005202 PROSITE:PS50985
HOGENOM:HOG000239326 eggNOG:NOG320780 EMBL:AF462831 EMBL:AY133537
EMBL:AF036303 EMBL:EU550755 EMBL:EU550756 EMBL:EU550757
EMBL:EU550758 EMBL:EU550759 EMBL:EU550760 EMBL:EU550761
EMBL:EU550762 EMBL:EU550763 EMBL:EU550764 EMBL:EU550765
EMBL:EU550766 EMBL:EU550767 EMBL:EU550768 EMBL:EU550769
EMBL:EU550770 EMBL:EU550771 EMBL:EU550772 EMBL:EU550773
EMBL:EU550774 EMBL:EU550775 EMBL:EU550776 EMBL:EU550777
IPI:IPI00542979 PIR:T01343 PIR:T51237 RefSeq:NP_191926.1
UniGene:At.3732 UniGene:At.67226 IntAct:O81316
EnsemblPlants:AT4G00150.1 GeneID:828208 KEGG:ath:AT4G00150
GeneFarm:4228 TAIR:At4g00150 InParanoid:O81316 OMA:KTPPWRA
PhylomeDB:O81316 ProtClustDB:CLSN2916162 Genevestigator:O81316
Uniprot:O81316
Length = 558
Score = 273 (101.2 bits), Expect = 4.8e-21, P = 4.8e-21
Identities = 108/365 (29%), Positives = 166/365 (45%)
Query: 127 LAQVILIRLKELVSPNDGSNMERLAAYFTDALQGLLEGAGGVHGNNKHYTSNGPHHRDDH 186
LAQ IL RL + +S G +ER A YF +AL LL +N T N P+
Sbjct: 222 LAQGILARLNQQLSSPVGKPLERAAFYFKEALNNLL--------HNVSQTLN-PYSL--- 269
Query: 187 HHTDVLAAFQLLQDMSPYVKFGHFTANQAILEAVANDRRVHIVDYDIMEGIQWASLMQAL 246
+AA++ ++SP ++F +FT+NQA+LE+ R+HI+D+DI G QWASLMQ L
Sbjct: 270 --IFKIAAYKSFSEISPVLQFANFTSNQALLESFHGFHRLHIIDFDIGYGGQWASLMQEL 327
Query: 247 VSRKDGPPAPHLRITALXX-XXXXXXXISTVQETGRRLVAFAASIGQPFSFHQCRLD--S 303
V R + P L+IT + Q+ L FA+ I LD
Sbjct: 328 VLRDNAAPLS-LKITVFASPANHDQLELGFTQDN---LKHFASEINISLDIQVLSLDLLG 383
Query: 304 DETFKASALKLVRGEALIINCMLHLPHFSYRAPDSIASFLSGAKTLNPRLVTLVEEETGP 363
++ S+ K EA+ +N + FS+ + L K L+P ++ +
Sbjct: 384 SISWPNSSEK----EAVAVN--ISAASFSH-----LPLVLRFVKHLSPTIIVCSDRGCER 432
Query: 364 IGDGGFVSRFMDSLHHYSAVYDSLEAGFPMQSRARALVERVFLGPRISGSLARIYRTCGE 423
D F + SLH ++A+++SL+A A +ER + P I + R E
Sbjct: 433 T-DLPFSQQLAHSLHSHTALFESLDA-VNANLDAMQKIERFLIQPEIEKLVLDRSRPI-E 489
Query: 424 EEVYSWGDWLGVVGFKPVNISFANHCQAKLLLGLFN-DGYRVEELANNRLVLGWKSRRLL 482
+ +W +GF PV S QA+ L+ G+ VE+ +N L+L W+ L+
Sbjct: 490 RPMMTWQAMFLQMGFSPVTHSNFTESQAECLVQRTPVRGFHVEK-KHNSLLLCWQRTELV 548
Query: 483 SASVW 487
S W
Sbjct: 549 GVSAW 553
>TAIR|locus:2055622 [details] [associations]
symbol:HAM1 "AT2G45160" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0010492 "maintenance of shoot apical meristem
identity" evidence=IGI] [GO:0030154 "cell differentiation"
evidence=IMP] [GO:0048768 "root hair cell tip growth" evidence=IMP]
[GO:0051301 "cell division" evidence=IMP] Pfam:PF03514
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0051301
GO:GO:0003700 GO:GO:0006351 GO:GO:0048768 GO:GO:0010492
InterPro:IPR005202 PROSITE:PS50985 HOGENOM:HOG000239326
ProtClustDB:CLSN2683334 EMBL:BT004053 EMBL:BT020591 IPI:IPI00534274
PIR:B84887 RefSeq:NP_182041.1 UniGene:At.27046 UniGene:At.67081
UniGene:At.74179 STRING:Q7XJM8 PaxDb:Q7XJM8 PRIDE:Q7XJM8
EnsemblPlants:AT2G45160.1 GeneID:819124 KEGG:ath:AT2G45160
GeneFarm:4226 TAIR:At2g45160 eggNOG:NOG320780 InParanoid:Q7XJM8
OMA:HRWIERS PhylomeDB:Q7XJM8 Genevestigator:Q7XJM8 Uniprot:Q7XJM8
Length = 640
Score = 267 (99.0 bits), Expect = 3.3e-20, P = 3.3e-20
Identities = 110/397 (27%), Positives = 185/397 (46%)
Query: 107 LVHLLMAAAEAL--TGVNKSRE--LAQVILIRLKELV--SPNDGSNMERLAAYFTDALQG 160
++ L AAE + TG N LAQ IL RL + S N S +R A++ +AL
Sbjct: 268 IIEQLFNAAELIGTTGNNNGDHTVLAQGILARLNHHLNTSSNHKSPFQRAASHIAEALLS 327
Query: 161 LLEGAGGVHGNNKHYTSNGPHHRDDHHHTDVLAAFQLLQDMSPYVKFGHFTANQAILEAV 220
L+ H S+ P ++ + AA++ + SP+++F +FTANQ+ILE+
Sbjct: 328 LI-----------HNESSPPLITPENLILRI-AAYRSFSETSPFLQFVNFTANQSILES- 374
Query: 221 ANDR---RVHIVDYDIMEGIQWASLMQALVSRKDGPP---APHLRITALXXXXXXXXXIS 274
N+ R+HI+D+D+ G QW+SLMQ L S G A L++T
Sbjct: 375 CNESGFDRIHIIDFDVGYGGQWSSLMQELASGVGGRRRNRASSLKLTVFAPPPSTVSDEF 434
Query: 275 TVQETGRRLVAFAASIGQPFSFHQCRLDS--DETFKASALKLVRGEALIINCMLHLPHFS 332
++ T L FA + PF ++ + + +L+ EA+ +N ++
Sbjct: 435 ELRFTEENLKTFAGEVKIPFEIELLSVELLLNPAYWPLSLRSSEKEAIAVNLPVNSVASG 494
Query: 333 YRAPDSIASFLSGAKTLNPRLVTLVEEETGPIGDGGFVSRFMDSLHHYSAVYDSLEAGFP 392
Y P I FL K L+P +V + D F + + SL +++++ +SL+A
Sbjct: 495 Y-LP-LILRFL---KQLSPNIVVCSDRGCDR-NDAPFPNAVIHSLQYHTSLLESLDAN-- 546
Query: 393 MQSRARALVERVFLGPRISGSLARIYRTCGEEEVYSWGDWLGVVGFKPVNISFANHCQAK 452
Q++ + +ER ++ P I L + +R E W GF P ++S QA+
Sbjct: 547 -QNQDDSSIERFWVQPSIEKLLMKRHRWI--ERSPPWRILFTQCGFSPASLSQMAEAQAE 603
Query: 453 LLLGLFND--GYRVEELANNRLVLGWKSRRLLSASVW 487
LL N G+ VE+ ++ LV+ W+ + L++ S W
Sbjct: 604 CLLQR-NPVRGFHVEKRQSS-LVMCWQRKELVTVSAW 638
>TAIR|locus:2083073 [details] [associations]
symbol:AT3G49950 "AT3G49950" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003700 GO:GO:0006351 EMBL:AL132978
InterPro:IPR005202 PROSITE:PS50985 eggNOG:NOG309215 EMBL:BT012553
EMBL:AK226623 IPI:IPI00534186 PIR:T45848 RefSeq:NP_190564.1
UniGene:At.50260 EnsemblPlants:AT3G49950.1 GeneID:824157
KEGG:ath:AT3G49950 GeneFarm:4259 TAIR:At3g49950
HOGENOM:HOG000241523 InParanoid:Q9SN22 OMA:MSMDFRV PhylomeDB:Q9SN22
ProtClustDB:CLSN2684384 Genevestigator:Q9SN22 Uniprot:Q9SN22
Length = 410
Score = 250 (93.1 bits), Expect = 6.6e-19, P = 6.6e-19
Identities = 107/393 (27%), Positives = 175/393 (44%)
Query: 110 LLMAAAEALTGVNKSRELAQVILIRLKELVSPNDGSNMERLAAYFTDALQGLLEGAGGVH 169
LL+ A A+ N + Q++ + L ++P DG + +RL + F L+ LL A
Sbjct: 30 LLLHCATAIDS-NDAALTHQILWV-LNN-IAPPDGDSTQRLTSAF---LRALLSRAVSKT 83
Query: 170 GNNKHYTSNGPHHRDDHHHTDV-LAAFQLLQDMSPYVKFGHFTANQAILEAVANDRRVHI 228
S P + H + V LAAF D++P+ +FG AN AIL AV VHI
Sbjct: 84 PTLSSTISFLPQADELHRFSVVELAAFV---DLTPWHRFGFIAANAAILTAVEGYSTVHI 140
Query: 229 VDYDIMEGIQWASLMQALVSRKDGPPAPHLRITALXXXXXXXXXIS-TVQETGRRLVAFA 287
VD + +Q +L+ A+ SR + PP P L++T + I+ + +E G +LV FA
Sbjct: 141 VDLSLTHCMQIPTLIDAMASRLNKPP-PLLKLTVVSSSDHFPPFINISYEELGSKLVNFA 199
Query: 288 ASIGQPFSFHQCRLDSDETFKASALKLVR------GEALIINCMLHLPHFSYRAPDSIAS 341
+ F + F +S L+ +R EAL++NC + L + S +S
Sbjct: 200 TTRNITMEFTIVPSTYSDGF-SSLLQQLRIYPSSFNEALVVNCHMMLRYIPEEPLTSSSS 258
Query: 342 -----FLSGAKTLNPRLVTLVEEETGPIGDGGFVSRFMDSLHHYSAVYDSLEAGFPMQSR 396
FL ++LNPR+VTL+EE+ + V+R + +++ +D+ + Q R
Sbjct: 259 SLRTVFLKQLRSLNPRIVTLIEEDVDLTSEN-LVNRLKSAFNYFWIPFDTTDTFMSEQRR 317
Query: 397 -ARALVERVFLGPRISGSLARIYRTCGEEEVYSWGDWLGVVGFKPVNISFANHCQAKLLL 455
A + R+ RT E W + + F V + K +L
Sbjct: 318 WYEAEISWKIENVVAKEGAERVERT---ETKRRWIERMREAEFGGVRVKEDAVADVKAML 374
Query: 456 GLFNDGYRVE-ELANNRLVLGWKSRRLLSASVW 487
G+ ++ E + LVL WK ++ A+VW
Sbjct: 375 EEHAVGWGMKKEDDDESLVLTWKGHSVVFATVW 407
>TAIR|locus:2184625 [details] [associations]
symbol:SCL8 "AT5G52510" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0005737 "cytoplasm" evidence=IDA]
Pfam:PF03514 GO:GO:0005634 GO:GO:0005737 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003700 GO:GO:0006351
InterPro:IPR005202 PROSITE:PS50985 EMBL:AP000378 EMBL:AF036305
EMBL:AY099686 EMBL:AY128868 IPI:IPI00531227 PIR:T51239
RefSeq:NP_200064.3 UniGene:At.22412 UniGene:At.71617 STRING:Q9FYR7
PRIDE:Q9FYR7 EnsemblPlants:AT5G52510.1 GeneID:835327
KEGG:ath:AT5G52510 GeneFarm:4234 TAIR:At5g52510 eggNOG:NOG240925
HOGENOM:HOG000239354 InParanoid:Q9FYR7 OMA:PGAPWRD PhylomeDB:Q9FYR7
ProtClustDB:CLSN2680518 Genevestigator:Q9FYR7 Uniprot:Q9FYR7
Length = 640
Score = 219 (82.2 bits), Expect = 8.1e-15, P = 8.1e-15
Identities = 112/401 (27%), Positives = 180/401 (44%)
Query: 116 EALTGVNKSR-ELAQVILIRLKELVSPN-DGSNMERLAAYFTDALQGLLEGAGGVHGNNK 173
E T + + + E+A IL R+ + +PN + ++ E+L + AL+ + A V +
Sbjct: 271 EIATAIAEGKTEIATEILARVSQ--TPNLERNSEEKLVDFMVAALRSRI--ASPV---TE 323
Query: 174 HYTSNGPHHRDDHHHTDVLAAFQLLQDMSPYVKFGHFTANQAILEAVAN-DRRV---HIV 229
Y G H L + QLL ++SP K G AN AIL+A N D + H++
Sbjct: 324 LY---GKEH---------LISTQLLYELSPCFKLGFEAANLAILDAADNNDGGMMIPHVI 371
Query: 230 DYDIMEGIQWASLMQALVSRKDGPP----APHLRITALXXXXXXXXXISTVQE----TGR 281
D+DI EG Q+ +L++ L +R++G +P ++ITA+ +E G
Sbjct: 372 DFDIGEGGQYVNLLRTLSTRRNGKSQSQNSPVVKITAVANNVYGCLVDDGGEERLKAVGD 431
Query: 282 RLVAFAASIGQPFSFHQCRLDSDETFKASALKLVRGEALIINCMLHLPHFSYRAPD-SIA 340
L +G SF+ +L E L +N L YR PD S+
Sbjct: 432 LLSQLGDRLGISVSFNVVTSLRLGDLNRESLGCDPDETLAVNLAFKL----YRVPDESVC 487
Query: 341 S------FLSGAKTLNPRLVTLVEEETGPIGDGGFVSRFMDSLHHYSAVYDSLEAGFPMQ 394
+ L K L PR+VTLVE+E F+ R +S Y A+ +S+E+ P
Sbjct: 488 TENPRDELLRRVKGLKPRVVTLVEQEMNS-NTAPFLGRVSESCACYGALLESVESTVPST 546
Query: 395 SRARALVERVFLGPRISGSLA-----RIYRTCGEEEVYS-WGDWLGVVGFK--PVNISFA 446
+ RA VE +G ++ ++A RI R C EV+ W + + GF+ P++ A
Sbjct: 547 NSDRAKVEEG-IGRKLVNAVACEGIDRIER-C---EVFGKWRMRMSMAGFELMPLSEKIA 601
Query: 447 NHCQAKLLLGLFNDGYRVEELANNRLVLGWKSRRLLSASVW 487
+++ + G+ V+E N + GW R L AS W
Sbjct: 602 ESMKSRG--NRVHPGFTVKE-DNGGVCFGWMGRALTVASAW 639
>TAIR|locus:2087994 [details] [associations]
symbol:AT3G13840 "AT3G13840" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003700 GO:GO:0006351 EMBL:AB028610
InterPro:IPR005202 PROSITE:PS50985 IPI:IPI00544801
RefSeq:NP_188000.1 UniGene:At.64114 PaxDb:Q9LRW3 PRIDE:Q9LRW3
EnsemblPlants:AT3G13840.1 GeneID:820596 KEGG:ath:AT3G13840
GeneFarm:4262 TAIR:At3g13840 eggNOG:NOG262645 HOGENOM:HOG000240132
InParanoid:Q9LRW3 OMA:WFAFPNN PhylomeDB:Q9LRW3
ProtClustDB:CLSN2684819 Genevestigator:Q9LRW3 Uniprot:Q9LRW3
Length = 510
Score = 202 (76.2 bits), Expect = 4.0e-13, P = 4.0e-13
Identities = 99/388 (25%), Positives = 152/388 (39%)
Query: 110 LLMAAAEALTGVNKSRELAQVILIRLKELVSPNDGSNMERLAAYFTDALQGLLEGAGGVH 169
LL A A+T N SR Q L L EL S + +N RLAA+ ALQ L +
Sbjct: 148 LLNPCALAITASNSSR--VQHYLCVLSELASSSGDAN-RRLAAFGLRALQHHLSSSSVSS 204
Query: 170 GNNKHYTSNGPHHRDDHHHTDVLAAFQLLQDMSPYVKFGHFTANQAILEAVANDRR---- 225
+T + L F ++SP+ + AN AIL+ +A D +
Sbjct: 205 SFWPVFTFASAEVK---MFQKTLLKFY---EVSPWFALPNNMANSAILQILAQDPKDKKD 258
Query: 226 VHIVDYDIMEGIQWASLMQALVSRKDGPPAPHLRITALXXXXXXX-XXISTV-QETGRRL 283
+HI+D + G+QW +L++AL R +GPP P +RIT + + G +L
Sbjct: 259 LHIIDIGVSHGMQWPTLLEALSCRLEGPP-PRVRITVISDLTADIPFSVGPPGYNYGSQL 317
Query: 284 VAFAASIGQPFSFHQCRLDSDETFKASALKLVRGEALIINCMLHLPHFSYRAPDSIASFL 343
+ FA S+ + LD + S E LI+ L H + D L
Sbjct: 318 LGFARSL--KINLQISVLDKLQLIDTSP-----HENLIVCAQFRLHHLKHSINDERGETL 370
Query: 344 SGAKTLNPRLVTLVEEETGPIGDGGFVSRFMDSLHHYSAVYDSLEAGFPMQ-SRARALVE 402
++L P+ V L E F + F L + DS +GF + S R L+E
Sbjct: 371 KAVRSLRPKGVVLCENNGECSSSADFAAGFSKKLEYVWKFLDSTSSGFKEENSEERKLME 430
Query: 403 RVFLGPRISGSLARIYRTCGE--EEVYSWGDWLGVVGFKPVNISFANHCQAKLLLGLFND 460
G ++ G+ E W + + GF AK LL +++
Sbjct: 431 ---------GEATKVLMNAGDMNEGKEKWYERMREAGFFVEAFEEDAVDGAKSLLRKYDN 481
Query: 461 GYRVE-ELANNRLVLGWKSRRLLSASVW 487
+ + E + L WK + S+W
Sbjct: 482 NWEIRMEDGDTFAGLMWKGEAVSFCSLW 509
>TAIR|locus:1009023400 [details] [associations]
symbol:AT5G67411 "AT5G67411" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] Pfam:PF03514 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0006355 GO:GO:0006351 EMBL:AB007645
InterPro:IPR005202 PROSITE:PS50985 EMBL:DQ487622 IPI:IPI00657013
RefSeq:NP_001032167.1 UniGene:At.65711 EnsemblPlants:AT5G67411.1
GeneID:3771574 KEGG:ath:AT5G67411 TAIR:At5g67411 eggNOG:NOG309215
PhylomeDB:Q2V2T9 Genevestigator:Q2V2T9 Uniprot:Q2V2T9
Length = 202
Score = 113 (44.8 bits), Expect = 0.00035, P = 0.00035
Identities = 48/182 (26%), Positives = 82/182 (45%)
Query: 237 IQWASLMQALVSRKDGPPAPHLRITALXXXXXXX----XXISTVQETGRRLVAFAAS--I 290
+Q +L+ ++ ++ P P L++T + IS +E G +LV FA + +
Sbjct: 1 MQIPTLIDSMANKLHKKPPPLLKLTVIASDAEFHPPPLLGIS-YEELGSKLVNFATTRNV 59
Query: 291 GQPFSFHQCRLDSDETFKASALKL---VRGEALIINCMLHLPHFSYRAPDSIAS------ 341
F + L++ V EAL++NC + L H+ PD I +
Sbjct: 60 AMEFRIISSSYSDGLSSLIEQLRIDPFVFNEALVVNCHMML-HY---IPDEILTSNLRSV 115
Query: 342 FLSGAKTLNPRLVTLVEEETGPIGDGGFVSRFMDSLHHYSAV-YDSLEAGFPMQSRARAL 400
FL + LNP +VTL++E++ F+SR + SL++Y + YD+ E S R
Sbjct: 116 FLKELRDLNPTIVTLIDEDSD-FTSTNFISR-LRSLYNYMWIPYDTAEMFLTRGSEQRQW 173
Query: 401 VE 402
E
Sbjct: 174 YE 175
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.136 0.414 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 495 469 0.00098 118 3 11 22 0.38 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 33
No. of states in DFA: 619 (66 KB)
Total size of DFA: 302 KB (2155 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 35.08u 0.11s 35.19t Elapsed: 00:00:02
Total cpu time: 35.09u 0.11s 35.20t Elapsed: 00:00:02
Start: Tue May 21 09:45:19 2013 End: Tue May 21 09:45:21 2013