BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 011014
(495 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O05871|PKND_MYCTU Serine/threonine-protein kinase PknD OS=Mycobacterium tuberculosis
GN=pknD PE=1 SV=1
Length = 664
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 46/97 (47%), Gaps = 11/97 (11%)
Query: 63 MIKFEGGYTVETV--FEGSKFGMEPFSVAVSPSGELLVLDSENNSRPKLVAGSPEGYYGH 120
++ G +TV F+G + P +AV G + V D NN KL AGS
Sbjct: 491 VVTLAAGSNNQTVLPFDGLNY---PEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLP 547
Query: 121 VDGRPRGARMNHPKGLAVDDRGNIYIADTMNMAIRKI 157
G +N P G+AVD+ GN+Y+ DT N + K+
Sbjct: 548 FTG------LNDPDGVAVDNSGNVYVTDTDNNRVVKL 578
Score = 42.7 bits (99), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 71/158 (44%), Gaps = 23/158 (14%)
Query: 63 MIKFEGGYTVETVFEGSKFGMEPFSVAVSPSGELLVLDSENNSRPKLVAGSPEGYYGHVD 122
++K G T TV + +P +AV +G + V D NN L AGS D
Sbjct: 450 VVKLATGSTGTTVLPFNGL-YQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQTVLPFD 507
Query: 123 GRPRGARMNHPKGLAVDDRGNIYIADTMNMAIRKISDTGVTTIAGGKWSRGVGHVDGPSE 182
G +N+P+GLAVD +G +Y+AD N + K +A G ++ V G
Sbjct: 508 G------LNYPEGLAVDTQGAVYVADRGNNRVVK--------LAAGSKTQTVLPFTG--- 550
Query: 183 DAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDD 220
ND D V V +S ++ V D N + +++ ++
Sbjct: 551 ----LNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNN 584
Score = 36.6 bits (83), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 58/148 (39%), Gaps = 39/148 (26%)
Query: 76 FEGSKFGMEPFSVAVSPSGELLVLDSENNSRPKLVAGSPEGYYGHVDGRPRGAR------ 129
F G F + P VAV +G + V + EG YG V G+
Sbjct: 419 FTGIDFRLSPSGVAVDSAGNVYV--------------TSEGMYGRVVKLATGSTGTTVLP 464
Query: 130 ---MNHPKGLAVDDRGNIYIADTMNMAIRKISDTGVTTIAGGKWSRGVGHVDGPSEDAKF 186
+ P+GLAVD G +Y+ D N V T+A G ++ V DG +
Sbjct: 465 FNGLYQPQGLAVDGAGTVYVTDFNNR---------VVTLAAGSNNQTVLPFDGLNYPEGL 515
Query: 187 SNDFDVVYVGSSCSLLVIDRGNQAIREI 214
+ D + ++ V DRGN + ++
Sbjct: 516 AVD-------TQGAVYVADRGNNRVVKL 536
Score = 33.5 bits (75), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 6/74 (8%)
Query: 85 PFSVAVSPSGELLVLDSENNSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNI 144
P+ +AV +G + V + N KL+AGS G +N P +AVD +
Sbjct: 596 PWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTG------LNTPLAVAVDSDRTV 649
Query: 145 YIADTMNMAIRKIS 158
Y+AD N + K++
Sbjct: 650 YVADRGNDRVVKLT 663
>sp|Q5ZI67|NHLC2_CHICK NHL repeat-containing protein 2 OS=Gallus gallus GN=NHLRC2 PE=2
SV=1
Length = 727
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 60/125 (48%), Gaps = 11/125 (8%)
Query: 85 PFSVAVSPSGELLVLDSENNSRPKLVAGSPEGYY-------GHVDGRPRGARMNHPKGLA 137
P V V SGE LV+ + R + + + + G DGR A N P+G+A
Sbjct: 221 PGKVTVDKSGERLVIADTGHHRILVTLKNGQILHTIGGPNSGRKDGRFSEAAFNSPQGVA 280
Query: 138 VDDRGNIYIADTMNMAIRKIS-DTGVTTIAGGKWSRGVGHVDGPS-EDAKFSNDFDVVYV 195
+ + IY+ADT N IRKI + + T G +GV G E+ S+ +DVV+
Sbjct: 281 IKNN-VIYVADTENHLIRKIDLELEIVTTVAGIGIQGVDKEGGAKGEEQPISSPWDVVF- 338
Query: 196 GSSCS 200
G+S S
Sbjct: 339 GNSVS 343
Score = 33.5 bits (75), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 51/103 (49%), Gaps = 11/103 (10%)
Query: 84 EPFS---VAVSPSGELLVLDSENNSRPKLVAGSPEGY----YGHVDGRPRGARMNHPKGL 136
EP++ VA S S + ++ ++ + LV G + +G VDG A++ HP G+
Sbjct: 416 EPWNCLFVADSESSTVRMISLKDGAVKHLVGGERDPLNLFAFGDVDGAGINAKLQHPLGI 475
Query: 137 AVD-DRGNIYIADTMNMAIRKISD--TGVTTIAG-GKWSRGVG 175
D R +Y+AD+ N I+ + T+AG G+ S VG
Sbjct: 476 TWDKKRKLLYVADSYNHKIKVVDPKMKNCATLAGTGEASNVVG 518
>sp|Q1PRL4|LIN41_CHICK E3 ubiquitin-protein ligase TRIM71 OS=Gallus gallus GN=TRIM71 PE=2
SV=1
Length = 876
Score = 42.7 bits (99), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 74/198 (37%), Gaps = 60/198 (30%)
Query: 63 MIKFEGGYTVETVFEGSKFGM--EPFSVAVSPSGELLVLDSENNS----RPKLVAGSPEG 116
+ FEG + ++ +G+K G P+ VAV+ G++LV D+ N+ P V + G
Sbjct: 687 IFTFEGQFILKFGEKGTKNGQFNYPWDVAVNAEGKILVSDTRNHRVQLFGPDGVFLNKYG 746
Query: 117 YYG----HVDGRPRGARMNH---------------------------------------P 133
+ G H D PRG NH P
Sbjct: 747 FEGALWKHFDS-PRGVTFNHEGHLVVTDFNNHRLLVIHADCQSARFLGSEGSGNGQFLRP 805
Query: 134 KGLAVDDRGNIYIADTMNMAIRKISDTGVTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVV 193
+G+AVD G I +AD+ N ++ G G G G +D PS +
Sbjct: 806 QGVAVDQEGRIIVADSRNHRVQIFESNGSFLCKFGAQGSGFGQMDRPSG----------I 855
Query: 194 YVGSSCSLLVIDRGNQAI 211
V ++V+D GN I
Sbjct: 856 AVTPDGMIVVVDFGNNRI 873
>sp|F6QEU4|LIN41_XENTR E3 ubiquitin-protein ligase TRIM71 OS=Xenopus tropicalis GN=trim71
PE=3 SV=1
Length = 814
Score = 42.4 bits (98), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 65/150 (43%), Gaps = 19/150 (12%)
Query: 67 EGGYTVETVFEGS--KFGMEPFSVAVSPSGELLVLDSENNSRPKLVAGSPEGYYGH---V 121
+G + + FEG+ K P VA S G L+V D N+ +L+ P+ H
Sbjct: 676 DGTFLNKYGFEGALWKHFDSPRGVAFSQDGYLVVTDFNNH---RLLIIKPDCQSAHFLGT 732
Query: 122 DGRPRGARMNHPKGLAVDDRGNIYIADTMNMAIRKISDTGVTTIAGGKWSRGVGHVDGPS 181
+G G + P+G+AVD G I +AD+ N ++ G G G G +D PS
Sbjct: 733 EGTGNGQFL-RPQGVAVDQEGRIIVADSRNHRVQIFEPNGSFLCKFGTQGSGFGQMDRPS 791
Query: 182 EDAKFSNDFDVVYVGSSCSLLVIDRGNQAI 211
+ V +++V+D GN I
Sbjct: 792 G----------IAVTPDGTIVVVDFGNNRI 811
>sp|Q03601|NHL1_CAEEL RING finger protein nhl-1 OS=Caenorhabditis elegans GN=nhl-1 PE=1
SV=2
Length = 974
Score = 41.6 bits (96), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 10/86 (11%)
Query: 127 GARMNHPKGLAVDDRGNIYIADTMNMAIRKISDTGVTTIAGGKWSRGVGHVDGPSEDAKF 186
G + P+G+A+D + N+ IAD+ N I+ G + G W G G + G
Sbjct: 897 GGQFKFPRGIAIDSQENLIIADSGNNRIQVFDAQGQFVSSFGTWGGGAGQLKG------- 949
Query: 187 SNDFDVVYVGSSCSLLVIDRGNQAIR 212
+ V V + S++V DR N I+
Sbjct: 950 ---VEDVCVTADGSIVVTDRENHRIQ 972
Score = 37.0 bits (84), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Query: 117 YYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMNMAIRKISDTGVTTIAGGKWSRGVGH 176
+ GH G A+ N+P G+AVDD G+IY+AD N ++ G G + G
Sbjct: 795 FGGHGQG---NAKFNNPWGVAVDDLGSIYVADKDNHRVQVFDKNGQFIAKFGSFGHLPGQ 851
Query: 177 VDGP 180
++ P
Sbjct: 852 LNSP 855
>sp|Q2Q1W2|LIN41_HUMAN E3 ubiquitin-protein ligase TRIM71 OS=Homo sapiens GN=TRIM71 PE=1
SV=1
Length = 868
Score = 41.6 bits (96), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 64/168 (38%), Gaps = 50/168 (29%)
Query: 63 MIKFEGGYTVETVFEGSKFGM--EPFSVAVSPSGELLVLDSENNS----RPKLVAGSPEG 116
+ FEG + ++ +G+K G P+ VAV+ G++LV D+ N+ P V + G
Sbjct: 679 IFTFEGQFLLKFGEKGTKNGQFNYPWDVAVNSEGKILVSDTRNHRIQLFGPDGVFLNKYG 738
Query: 117 YYG----HVDGRPRGARMNH---------------------------------------P 133
+ G H D PRG NH P
Sbjct: 739 FEGALWKHFDS-PRGVAFNHEGHLVVTDFNNHRLLVIHPDCQSARFLGSEGTGNGQFLRP 797
Query: 134 KGLAVDDRGNIYIADTMNMAIRKISDTGVTTIAGGKWSRGVGHVDGPS 181
+G+AVD G I +AD+ N ++ G G G G +D PS
Sbjct: 798 QGVAVDQEGRIIVADSRNHRVQMFESNGSFLCKFGAQGSGFGQMDRPS 845
>sp|E1BJS7|LIN41_BOVIN E3 ubiquitin-protein ligase TRIM71 OS=Bos taurus GN=TRIM71 PE=3
SV=2
Length = 868
Score = 41.6 bits (96), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 74/198 (37%), Gaps = 60/198 (30%)
Query: 63 MIKFEGGYTVETVFEGSKFGM--EPFSVAVSPSGELLVLDSENNS----RPKLVAGSPEG 116
+ FEG + ++ +G+K G P+ VAV+ G++LV D+ N+ P V + G
Sbjct: 679 IFTFEGQFLLKFGEKGTKNGQFNYPWDVAVNSEGKILVSDTRNHRIQLFGPDGVFLNKYG 738
Query: 117 YYG----HVDGRPRGARMNH---------------------------------------P 133
+ G H D PRG NH P
Sbjct: 739 FEGALWKHFDS-PRGVAFNHEGHLVVTDFNNHRLLVIHPDCQSARFLGSEGTGNGQFLRP 797
Query: 134 KGLAVDDRGNIYIADTMNMAIRKISDTGVTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVV 193
+G+AVD G I +AD+ N ++ G G G G +D PS +
Sbjct: 798 QGVAVDQEGRIIVADSRNHRVQMFESNGSFLCKFGAQGSGFGQMDRPSG----------I 847
Query: 194 YVGSSCSLLVIDRGNQAI 211
V ++V+D GN I
Sbjct: 848 AVTPDGMIVVVDFGNNRI 865
>sp|D3ZVM4|LIN41_RAT E3 ubiquitin-protein ligase TRIM71 OS=Rattus norvegicus GN=Trim71
PE=3 SV=1
Length = 855
Score = 41.6 bits (96), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 74/198 (37%), Gaps = 60/198 (30%)
Query: 63 MIKFEGGYTVETVFEGSKFGM--EPFSVAVSPSGELLVLDSENNS----RPKLVAGSPEG 116
+ FEG + ++ +G+K G P+ VAV+ G++LV D+ N+ P V + G
Sbjct: 666 IFTFEGQFLLKFGEKGTKNGQFNYPWDVAVNSEGKILVSDTRNHRIQLFGPDGVFLNKYG 725
Query: 117 YYG----HVDGRPRGARMNH---------------------------------------P 133
+ G H D PRG NH P
Sbjct: 726 FEGSLWKHFDS-PRGVAFNHEGHLVVTDFNNHRLLVIHPDCQSARFLGSEGTGNGQFLRP 784
Query: 134 KGLAVDDRGNIYIADTMNMAIRKISDTGVTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVV 193
+G+AVD G I +AD+ N ++ G G G G +D PS +
Sbjct: 785 QGVAVDQEGRIIVADSRNHRVQMFEANGSFLCKFGAQGSGFGQMDRPSG----------I 834
Query: 194 YVGSSCSLLVIDRGNQAI 211
V ++V+D GN I
Sbjct: 835 AVTPEGLIVVVDFGNNRI 852
>sp|Q9WTS6|TEN3_MOUSE Teneurin-3 OS=Mus musculus GN=Tenm3 PE=1 SV=1
Length = 2715
Score = 40.8 bits (94), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 48/112 (42%), Gaps = 27/112 (24%)
Query: 68 GGYTVETVFEGSKFGMEPFSVAVSPSGELLVLDSE-----------NNSRPKLVAGSPE- 115
G + V+T E + ++AVS SG L + +++ + LVAG P
Sbjct: 1410 GKHAVQTTLESAT------AIAVSYSGVLYITETDEKKINRIRQVTTDGEISLVAGIPSE 1463
Query: 116 ---------GYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMNMAIRKIS 158
Y DG + A++N P LA G +YIAD N+ IR +S
Sbjct: 1464 CDCKNDANCDCYQSGDGYAKDAKLNAPSSLAASPDGTLYIADLGNIRIRAVS 1515
>sp|Q9W7R3|TEN4_DANRE Teneurin-4 OS=Danio rerio GN=tenm4 PE=2 SV=1
Length = 2824
Score = 40.8 bits (94), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 43/92 (46%), Gaps = 21/92 (22%)
Query: 87 SVAVSPSGELLVLDSE-----------NNSRPKLVAGSPEGY----------YGHVDGRP 125
++AVS +G L + +S+ N L+AG+P G Y DG
Sbjct: 1527 ALAVSHNGLLYIAESDEKKINRVRQVSTNGEISLLAGAPSGCDCKNDANCDCYSGDDGYA 1586
Query: 126 RGARMNHPKGLAVDDRGNIYIADTMNMAIRKI 157
+ A++N P LAV G ++IAD N+ IR +
Sbjct: 1587 KDAKLNAPSSLAVSPDGELFIADLGNIRIRYV 1618
>sp|Q8BZW8|NHLC2_MOUSE NHL repeat-containing protein 2 OS=Mus musculus GN=Nhlrc2 PE=2 SV=1
Length = 725
Score = 40.8 bits (94), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 68/151 (45%), Gaps = 27/151 (17%)
Query: 84 EPFS---VAVSPSGELLVLDSENNSRPKLVAGSPEGY----YGHVDGRPRGARMNHPKGL 136
EP+S VA S S + + + + LV G + +G VDG A++ HP G+
Sbjct: 421 EPWSCLFVADSESSTVRTVSLRDGAVKHLVGGERDPMNLFAFGDVDGAGINAKLQHPLGV 480
Query: 137 AVD-DRGNIYIADTMNMAIRKI--SDTGVTTIAGGKWSRGVGHVDGPSEDAKFS------ 187
A D +R +Y+AD+ N I+ + G TT+AG G + DA S
Sbjct: 481 AWDEERQVLYVADSYNHKIKVVDPKTKGCTTLAG----------TGDASDASSSFAESAF 530
Query: 188 NDFDVVYVGSSCSLL-VIDRGNQAIREIQLH 217
N+ + +G S LL V D N I+ + L
Sbjct: 531 NEPGGLCIGESGRLLYVADTNNHQIKVMDLE 561
Score = 39.3 bits (90), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Query: 88 VAVSPSGELLVLDSENNSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIA 147
+ V+ +G +L + N R + G P G DG + N P+G+A+ D IY+A
Sbjct: 238 LVVADTGHHRILVIQKNGRIQSSIGGPNP--GRKDGMFSESSFNSPQGVAIADN-VIYVA 294
Query: 148 DTMNMAIRKISDTG--VTTIAG 167
DT N IRKI VTT+AG
Sbjct: 295 DTENHLIRKIDLEAEKVTTVAG 316
>sp|Q1PSW8|LIN41_MOUSE E3 ubiquitin-protein ligase TRIM71 OS=Mus musculus GN=Trim71 PE=1
SV=1
Length = 855
Score = 40.0 bits (92), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 56/138 (40%), Gaps = 13/138 (9%)
Query: 76 FEGS--KFGMEPFSVAVSPSGELLVLDSENNSRPKLVAGSPEGYYGHVDGRPRGARMNHP 133
FEGS K P VA + G L+V D N+ + + +G G + P
Sbjct: 726 FEGSLWKHFDSPRGVAFNNEGHLVVTDFNNHRLLVIHPDCQSARFLGSEGSGNGQFL-RP 784
Query: 134 KGLAVDDRGNIYIADTMNMAIRKISDTGVTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVV 193
+G+AVD G I +AD+ N ++ G G G G +D PS A +
Sbjct: 785 QGVAVDQEGRIIVADSRNHRVQMFEANGSFLCKFGAQGSGFGQMDRPSGIAVTPDGL--- 841
Query: 194 YVGSSCSLLVIDRGNQAI 211
++V+D GN I
Sbjct: 842 -------IVVVDFGNNRI 852
>sp|A4IF69|NHLC2_BOVIN NHL repeat-containing protein 2 OS=Bos taurus GN=NHLRC2 PE=2 SV=1
Length = 726
Score = 39.7 bits (91), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 52/105 (49%), Gaps = 9/105 (8%)
Query: 118 YGHVDGRPRGARMNHPKGLAVDDRGN-IYIADTMNMAIRKI--SDTGVTTIAG-GKWSRG 173
+G VDG AR+ HP G+ D + N +Y+AD+ N I+ + TT+AG G S
Sbjct: 462 FGDVDGVGINARLQHPLGVTWDQKRNLLYVADSYNHKIKVVDPKTKNCTTLAGTGNASNM 521
Query: 174 VGHVDGPSEDAKFSNDFDVVYVGSSCSLL-VIDRGNQAIREIQLH 217
+G D+ F N+ + +G + LL V D N I+ + L
Sbjct: 522 IGS---SFTDSTF-NEPGGLCIGENGQLLYVADTNNHQIKVLDLE 562
>sp|Q9WTS4|TEN1_MOUSE Teneurin-1 OS=Mus musculus GN=Tenm1 PE=1 SV=1
Length = 2731
Score = 39.7 bits (91), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 21/93 (22%)
Query: 87 SVAVSPSGELLVLDSE-----------NNSRPKLVAGSPEGYYGHVD----------GRP 125
+++VS SG L + +++ N ++AG+P +D G
Sbjct: 1436 AISVSHSGLLFIAETDERKVNRIQQVTTNGEISIIAGAPTDCDCKIDPNCDCFSGDGGYA 1495
Query: 126 RGARMNHPKGLAVDDRGNIYIADTMNMAIRKIS 158
+ A+M P LAV G +Y+AD N+ IR IS
Sbjct: 1496 KDAKMKAPSSLAVSPDGTLYVADLGNVRIRTIS 1528
>sp|Q9W7R4|TEN3_DANRE Teneurin-3 OS=Danio rerio GN=tenm3 PE=2 SV=1
Length = 2590
Score = 38.9 bits (89), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 47/111 (42%), Gaps = 27/111 (24%)
Query: 68 GGYTVETVFEGSKFGMEPFSVAVSPSGELLVLDSENNSRPKLVAGSPEGYYGHVDGRP-- 125
G ++T EG+ ++++S SG L + +++ ++ S +G H+ G P
Sbjct: 1284 GKRAIQTTLEGAT------AISLSYSGVLYIAETDEKKINRIRQVSTDGEISHLAGAPSD 1337
Query: 126 -------------------RGARMNHPKGLAVDDRGNIYIADTMNMAIRKI 157
+ AR+N P L V G +Y+AD N+ IR I
Sbjct: 1338 CDCKNDANCDCYQTGDGYAKDARLNAPSSLVVSPDGTLYVADLGNIRIRAI 1388
>sp|Q9UKZ4|TEN1_HUMAN Teneurin-1 OS=Homo sapiens GN=TENM1 PE=1 SV=2
Length = 2725
Score = 38.9 bits (89), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 21/93 (22%)
Query: 87 SVAVSPSGELLVLDSE-----------NNSRPKLVAGSPEGYYGHVD----------GRP 125
+++VS SG L + +++ N ++AG+P +D G
Sbjct: 1430 AISVSHSGLLFIAETDERKVNRIQQVTTNGEIYIIAGAPTDCDCKIDPNCDCFSGDGGYA 1489
Query: 126 RGARMNHPKGLAVDDRGNIYIADTMNMAIRKIS 158
+ A+M P LAV G +Y+AD N+ IR IS
Sbjct: 1490 KDAKMKAPSSLAVSPDGTLYVADLGNVRIRTIS 1522
Score = 35.4 bits (80), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Query: 123 GRPRGARMNHPKGLAVDDRGNIYIADTMNMAIRKISDTGVTTIAGG 168
GR A +N P+G+ VD G IY D IRKI + V T G
Sbjct: 1298 GRASEASLNSPRGITVDRHGFIYFVD--GTMIRKIDENAVITTVIG 1341
>sp|Q3UHK6|TEN4_MOUSE Teneurin-4 OS=Mus musculus GN=Tenm4 PE=1 SV=2
Length = 2771
Score = 38.1 bits (87), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 43/92 (46%), Gaps = 21/92 (22%)
Query: 87 SVAVSPSGELLVLDSE-----------NNSRPKLVAGSPEGY----------YGHVDGRP 125
++AVS +G L + +++ + LVAG+P G + DG
Sbjct: 1474 ALAVSHNGVLYIAETDEKKINRIRQVTTSGEISLVAGAPSGCDCKNDANCDCFSGDDGYA 1533
Query: 126 RGARMNHPKGLAVDDRGNIYIADTMNMAIRKI 157
+ A++N P LAV G +Y+AD N+ IR I
Sbjct: 1534 KDAKLNTPSSLAVCADGELYVADLGNIRIRFI 1565
>sp|Q6N022|TEN4_HUMAN Teneurin-4 OS=Homo sapiens GN=TENM4 PE=1 SV=2
Length = 2769
Score = 38.1 bits (87), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 43/92 (46%), Gaps = 21/92 (22%)
Query: 87 SVAVSPSGELLVLDSE-----------NNSRPKLVAGSPEGY----------YGHVDGRP 125
++AVS +G L + +++ + LVAG+P G + DG
Sbjct: 1472 ALAVSHNGVLYIAETDEKKINRIRQVTTSGEISLVAGAPSGCDCKNDANCDCFSGDDGYA 1531
Query: 126 RGARMNHPKGLAVDDRGNIYIADTMNMAIRKI 157
+ A++N P LAV G +Y+AD N+ IR I
Sbjct: 1532 KDAKLNTPSSLAVCADGELYVADLGNIRIRFI 1563
>sp|O75382|TRIM3_HUMAN Tripartite motif-containing protein 3 OS=Homo sapiens GN=TRIM3 PE=1
SV=2
Length = 744
Score = 37.4 bits (85), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 51/119 (42%), Gaps = 12/119 (10%)
Query: 88 VAVSPSGELLVLDSENNSRPKLVAGSPEGYYGH---VDGRPRGARMNHPKGLAVDDRGNI 144
V+ + SG ++V DS N + S EG + V GR G ++ P G+AVD G+I
Sbjct: 492 VSAASSGRIVVADSNNQC---IQVFSNEGQFKFRFGVRGRSPG-QLQRPTGVAVDTNGDI 547
Query: 145 YIADTMNMAIRKISDTGVTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLV 203
+AD N + S G K G G + GP A N +V SC +
Sbjct: 548 IVADYDNRWVSIFSPEGKF-----KTKIGAGRLMGPKGVAVDRNGHIIVVDNKSCCVFT 601
Score = 35.4 bits (80), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 11/82 (13%)
Query: 85 PFSVAVSPSGELLVLDSENNSRPKLVAGSPE-----GYYGHVDGRPRGARMNHPKGLAVD 139
P VAV+ E++V D N+S K+ + E G +G +G+ N P G+AVD
Sbjct: 625 PHFVAVNNKNEIVVTDFHNHS-VKVYSADGEFLFKFGSHGEGNGQ-----FNAPTGVAVD 678
Query: 140 DRGNIYIADTMNMAIRKISDTG 161
GNI +AD N I+ +G
Sbjct: 679 SNGNIIVADWGNSRIQVFDSSG 700
Score = 33.1 bits (74), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 57/134 (42%), Gaps = 19/134 (14%)
Query: 83 MEPFSVAVSPSGELLVLDSENNSRPKLVAGSPEG-YYGHVDGRPRGARMNH---PKGLAV 138
M P VAV +G ++V+D N + P G G G RGA H P +AV
Sbjct: 576 MGPKGVAVDRNGHIIVVD---NKSCCVFTFQPNGKLVGRFGG--RGATDRHFAGPHFVAV 630
Query: 139 DDRGNIYIADTMNMAIRKISDTGVTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSS 198
+++ I + D N +++ S G G G G + P+ V V S+
Sbjct: 631 NNKNEIVVTDFHNHSVKVYSADGEFLFKFGSHGEGNGQFNAPTG----------VAVDSN 680
Query: 199 CSLLVIDRGNQAIR 212
+++V D GN I+
Sbjct: 681 GNIIVADWGNSRIQ 694
>sp|Q9R1R2|TRIM3_MOUSE Tripartite motif-containing protein 3 OS=Mus musculus GN=Trim3 PE=1
SV=1
Length = 744
Score = 37.4 bits (85), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 51/119 (42%), Gaps = 12/119 (10%)
Query: 88 VAVSPSGELLVLDSENNSRPKLVAGSPEGYYGH---VDGRPRGARMNHPKGLAVDDRGNI 144
V+ + SG ++V DS N + S EG + V GR G ++ P G+AVD G+I
Sbjct: 492 VSAASSGRIVVADSNNQC---IQVFSNEGQFKFRFGVRGRSPG-QLQRPTGVAVDTNGDI 547
Query: 145 YIADTMNMAIRKISDTGVTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLV 203
+AD N + S G K G G + GP A N +V SC +
Sbjct: 548 IVADYDNRWVSIFSPEGKF-----KTKIGAGRLMGPKGVAVDRNGHIIVVDNKSCCVFT 601
Score = 35.4 bits (80), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 11/82 (13%)
Query: 85 PFSVAVSPSGELLVLDSENNSRPKLVAGSPE-----GYYGHVDGRPRGARMNHPKGLAVD 139
P VAV+ E++V D N+S K+ + E G +G +G+ N P G+AVD
Sbjct: 625 PHFVAVNNKNEIVVTDFHNHS-VKVYSADGEFLFKFGSHGEGNGQ-----FNAPTGVAVD 678
Query: 140 DRGNIYIADTMNMAIRKISDTG 161
GNI +AD N I+ +G
Sbjct: 679 SNGNIIVADWGNSRIQVFDSSG 700
Score = 33.1 bits (74), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 57/134 (42%), Gaps = 19/134 (14%)
Query: 83 MEPFSVAVSPSGELLVLDSENNSRPKLVAGSPEG-YYGHVDGRPRGARMNH---PKGLAV 138
M P VAV +G ++V+D N + P G G G RGA H P +AV
Sbjct: 576 MGPKGVAVDRNGHIIVVD---NKSCCVFTFQPNGKLVGRFGG--RGATDRHFAGPHFVAV 630
Query: 139 DDRGNIYIADTMNMAIRKISDTGVTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSS 198
+++ I + D N +++ S G G G G + P+ V V S+
Sbjct: 631 NNKNEIVVTDFHNHSVKVYSADGEFLFKFGSHGEGNGQFNAPTG----------VAVDSN 680
Query: 199 CSLLVIDRGNQAIR 212
+++V D GN I+
Sbjct: 681 GNIIVADWGNSRIQ 694
>sp|E7FAM5|LIN41_DANRE E3 ubiquitin-protein ligase TRIM71 OS=Danio rerio GN=trim71 PE=2
SV=1
Length = 824
Score = 37.4 bits (85), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 51/121 (42%), Gaps = 11/121 (9%)
Query: 67 EGGYTVETVFEGS--KFGMEPFSVAVSPSGELLVLDSENNS----RPKLVAGSPEGYYGH 120
+G + + FEG+ K P VA + G L+V D N+ RP + G G
Sbjct: 686 DGTFLNKYGFEGALWKHFDSPRGVAFNQEGHLVVTDFNNHRLLVIRPDCQSARFLGSEGT 745
Query: 121 VDGRPRGARMNHPKGLAVDDRGNIYIADTMNMAIRKISDTGVTTIAGGKWSRGVGHVDGP 180
+G+ P+G+AVD I +AD+ N I+ G G G G +D P
Sbjct: 746 GNGQ-----FLRPQGVAVDQEDRIIVADSRNHRIQVFEPNGNFLCKFGTHGNGFGQMDRP 800
Query: 181 S 181
S
Sbjct: 801 S 801
>sp|O70277|TRIM3_RAT Tripartite motif-containing protein 3 OS=Rattus norvegicus GN=Trim3
PE=1 SV=1
Length = 744
Score = 37.0 bits (84), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 54/130 (41%), Gaps = 14/130 (10%)
Query: 77 EGSKFGMEPFSVAVSPSGELLVLDSENNSRPKLVAGSPEGYYGH---VDGRPRGARMNHP 133
+G + P S A SG ++V DS N + S EG + V GR G ++ P
Sbjct: 483 KGEFTNLHPLSAA--SSGRIVVADSNNQC---IQVFSNEGQFKFRFGVRGRSPG-QLQRP 536
Query: 134 KGLAVDDRGNIYIADTMNMAIRKISDTGVTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVV 193
G+AVD G+I +AD N + S G K G G + GP A N +V
Sbjct: 537 TGVAVDTNGDIIVADYDNRWVSIFSPEGKF-----KTKIGAGRLMGPKGVAVDRNGHIIV 591
Query: 194 YVGSSCSLLV 203
SC +
Sbjct: 592 VDNKSCCVFT 601
Score = 35.4 bits (80), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 11/82 (13%)
Query: 85 PFSVAVSPSGELLVLDSENNSRPKLVAGSPE-----GYYGHVDGRPRGARMNHPKGLAVD 139
P VAV+ E++V D N+S K+ + E G +G +G+ N P G+AVD
Sbjct: 625 PHFVAVNNKNEIVVTDFHNHS-VKVYSADGEFLFKFGSHGEGNGQ-----FNAPTGVAVD 678
Query: 140 DRGNIYIADTMNMAIRKISDTG 161
GNI +AD N I+ +G
Sbjct: 679 SNGNIIVADWGNSRIQVFDSSG 700
>sp|Q8NBF2|NHLC2_HUMAN NHL repeat-containing protein 2 OS=Homo sapiens GN=NHLRC2 PE=1 SV=1
Length = 726
Score = 36.6 bits (83), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 49/104 (47%), Gaps = 7/104 (6%)
Query: 118 YGHVDGRPRGARMNHPKGLAVDDRGN-IYIADTMNMAIRKI--SDTGVTTIAGGKWSRGV 174
+G VDG A++ HP G+ D + N +Y+AD+ N I+ + TT+AG +
Sbjct: 462 FGDVDGVGINAKLQHPLGVTWDKKRNLLYVADSYNHKIKVVDPKTKNCTTLAG---TGDT 518
Query: 175 GHVDGPSEDAKFSNDFDVVYVGSSCSLL-VIDRGNQAIREIQLH 217
+V S N+ + +G + LL V D N I+ + L
Sbjct: 519 NNVTSSSFTESTFNEPGGLCIGENGELLYVADTNNHQIKVMDLE 562
Score = 32.3 bits (72), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
Query: 119 GHVDGRPRGARMNHPKGLAVDDRGNIYIADTMNMAIRKISDTG--VTTIAG 167
G DG + N P+G+A+ + IY+ADT N IRKI V+T+AG
Sbjct: 267 GRKDGIFSESTFNSPQGVAIMNN-IIYVADTENHLIRKIDLEAEKVSTVAG 316
>sp|Q9DER5|TEN2_CHICK Teneurin-2 OS=Gallus gallus GN=TENM2 PE=1 SV=1
Length = 2802
Score = 36.6 bits (83), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 35/76 (46%), Gaps = 15/76 (19%)
Query: 90 VSPSGELLVL-------DSENNSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRG 142
V+ +GE+ +L D +N+ +G DG A +N P LAV G
Sbjct: 1532 VTTNGEICLLAGAASDCDCKNDVNCNCYSGD--------DGYATDAILNSPSSLAVAPDG 1583
Query: 143 NIYIADTMNMAIRKIS 158
IYIAD N+ IR +S
Sbjct: 1584 TIYIADLGNIRIRAVS 1599
>sp|Q9W6V6|TEN1_CHICK Teneurin-1 OS=Gallus gallus GN=TENM1 PE=1 SV=1
Length = 2705
Score = 36.2 bits (82), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Query: 123 GRPRGARMNHPKGLAVDDRGNIYIADTMNMAIRKISDTG-VTTIAG 167
G+ A +N P+G+ +D G IY D IRKI + G +TTI G
Sbjct: 1278 GKASEASLNSPRGITIDKHGFIYFVD--GTMIRKIDENGMITTIIG 1321
>sp|Q9U489|LIN41_CAEEL Protein lin-41 OS=Caenorhabditis elegans GN=lin-41 PE=2 SV=1
Length = 1147
Score = 35.8 bits (81), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 49/108 (45%), Gaps = 7/108 (6%)
Query: 77 EGSKFG--MEPFSVAVSPSGELLVLDSENNSRPKLVA--GSPEGYYGHVDGRPRGARMNH 132
EGS G P+ + V G ++V D NN R ++ G+ +G RP + +
Sbjct: 838 EGSGDGELCRPWGICVDQRGRVIVADRSNN-RVQIFDKDGNFISKFGTSGNRP--GQFDR 894
Query: 133 PKGLAVDDRGNIYIADTMNMAIRKISDTGVTTIAGGKWSRGVGHVDGP 180
P G+ + NI +AD N ++ + G+ + G R VG+ + P
Sbjct: 895 PAGITTNSLNNIVVADKDNHRVQVFDENGMFLLKFGDRGRAVGYFNYP 942
>sp|P96069|SSAU_SALTY Secretion system apparatus protein SsaU OS=Salmonella typhimurium
(strain LT2 / SGSC1412 / ATCC 700720) GN=ssaU PE=3 SV=1
Length = 352
Score = 35.8 bits (81), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Query: 4 NLVVFLLILVFFFGGFSSVSASTPPAKIVAGIVSNVVSALVKWLW 48
+++ LI FFF ++S + P + G++ VVS+L+KWLW
Sbjct: 145 KVIMLSLIFAFFFYYYASTFRALPYCGLACGVL--VVSSLIKWLW 187
>sp|D3ZQG6|TRIM2_RAT Tripartite motif-containing protein 2 OS=Rattus norvegicus GN=Trim2
PE=1 SV=2
Length = 744
Score = 35.4 bits (80), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 10/118 (8%)
Query: 88 VAVSPSGELLVLDSENNSRPKLVA--GSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIY 145
VA S SG++L+ DS NN ++ + G + +G + GR G ++ P G+AV G+I
Sbjct: 492 VAASTSGKILIADS-NNQCVQIFSNDGQFKSRFG-IRGRSPG-QLQRPTGVAVHPSGDII 548
Query: 146 IADTMNMAIRKISDTGVTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLV 203
IAD N + S+ G K G G + GP + N +V +C + +
Sbjct: 549 IADYDNKWVSIFSNDGKF-----KTKIGSGKLMGPKGVSVDRNGHIIVVDNKACCVFI 601
Score = 33.5 bits (75), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Query: 85 PFSVAVSPSGELLVLDSENNSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNI 144
P AV+ S E+++ D N+S K+ E + N P G+AVD GNI
Sbjct: 625 PHFAAVNSSNEIIITDFHNHS-VKVFNQEGEFMLKFGSNGEGNGQFNAPTGVAVDSNGNI 683
Query: 145 YIADTMNMAIRKISDTG 161
+AD N I+ +G
Sbjct: 684 IVADWGNSRIQVFDGSG 700
>sp|Q9ESN6|TRIM2_MOUSE Tripartite motif-containing protein 2 OS=Mus musculus GN=Trim2 PE=1
SV=1
Length = 744
Score = 35.4 bits (80), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 10/118 (8%)
Query: 88 VAVSPSGELLVLDSENNSRPKLVA--GSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIY 145
VA S SG++L+ DS NN ++ + G + +G + GR G ++ P G+AV G+I
Sbjct: 492 VAASTSGKILIADS-NNQCVQIFSNDGQFKSRFG-IRGRSPG-QLQRPTGVAVHPSGDII 548
Query: 146 IADTMNMAIRKISDTGVTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLV 203
IAD N + S+ G K G G + GP + N +V +C + +
Sbjct: 549 IADYDNKWVSIFSNDGKF-----KTKIGSGKLMGPKGVSVDRNGHIIVVDNKACCVFI 601
Score = 32.3 bits (72), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 46/106 (43%), Gaps = 8/106 (7%)
Query: 85 PFSVAVSPSGELLVLDSENNSRPKLVA-GSPEGYYGHVDGRPRGARMNHPKGLAVDDRGN 143
P VAV PSG++++ D +N K V+ S +G + G ++ PKG++VD G+
Sbjct: 536 PTGVAVHPSGDIIIADYDN----KWVSIFSNDGKFKTKIG---SGKLMGPKGVSVDRNGH 588
Query: 144 IYIADTMNMAIRKISDTGVTTIAGGKWSRGVGHVDGPSEDAKFSND 189
I + D + G G G GP A SN+
Sbjct: 589 IIVVDNKACCVFIFQPNGKIVTRFGSRGNGDRQFAGPHFAAVNSNN 634
Score = 32.3 bits (72), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Query: 85 PFSVAVSPSGELLVLDSENNSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNI 144
P AV+ + E+++ D N+S K+ E + N P G+AVD GNI
Sbjct: 625 PHFAAVNSNNEIIITDFHNHS-VKVFNQEGEFMLKFGSNGEGNGQFNAPTGVAVDSNGNI 683
Query: 145 YIADTMNMAIRKISDTG 161
+AD N I+ +G
Sbjct: 684 IVADWGNSRIQVFDGSG 700
>sp|Q9V4M2|WECH_DROME Protein wech OS=Drosophila melanogaster GN=wech PE=1 SV=2
Length = 832
Score = 35.0 bits (79), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 78/204 (38%), Gaps = 30/204 (14%)
Query: 27 PPAKIVAGIVSNVVSALVKW-LWSLKDSPKTAVSS----------SSMIKFEGGYTVETV 75
P G+ S + SA + W L L+ SP S+ ++K +
Sbjct: 480 PRGGSACGMSSGMSSAALDWELNGLRSSPGLHFSAPRTTQAIPGCMDLVKVRNSNALSLS 539
Query: 76 F--EGSKFGM--EPFSVAVSPSGELLVLDSENNSRPKLVAGSPEGYYGHVDGRPR--GAR 129
F EG + G P+ + V G +LV D NN ++ +P+G GR
Sbjct: 540 FATEGHEDGQVSRPWGLCVDKMGHVLVSDRRNN---RVQVFNPDGSLKFKFGRKGVGNGE 596
Query: 130 MNHPKGLAVDDRGNIYIADTMNMAIRKISDTGVTTIAGGKWSRGVGHVDGPSEDAKFSND 189
+ P G+ VD I + D N ++ + +GV + G + + G P +
Sbjct: 597 FDLPAGICVDVDNRIIVVDKDNHRVQIFTASGVFLLKFGSYGKEYGQFQYPWD------- 649
Query: 190 FDVVYVGSSCSLLVIDRGNQAIRE 213
V V S ++V D N I++
Sbjct: 650 ---VAVNSRRQIVVTDSRNHRIQQ 670
Score = 34.3 bits (77), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 40/99 (40%), Gaps = 19/99 (19%)
Query: 67 EGGYTVETVFEG---SKFGMEPFSVAVSPSGELLVLDSENNS--------RPKLVAGSPE 115
EG + + VF+ +K P V +P+G ++V D +N+ L E
Sbjct: 674 EGRFIRQIVFDNHGQTKGIASPRGVCYTPTGNIIVSDFDNHCLYLIDPDINDILSVKGHE 733
Query: 116 GYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMNMAI 154
G H N P GL DD G I +AD+ N I
Sbjct: 734 GSGFH--------EFNRPSGLCCDDEGRIIVADSKNQRI 764
>sp|F7H9X2|TRIM2_CALJA Tripartite motif-containing protein 2 OS=Callithrix jacchus
GN=TRIM2 PE=3 SV=1
Length = 744
Score = 34.7 bits (78), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 55/118 (46%), Gaps = 10/118 (8%)
Query: 88 VAVSPSGELLVLDSENNSRPKLVA--GSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIY 145
VA S SG++L+ DS NN ++ + G + +G + GR G ++ P G+AV G+I
Sbjct: 492 VAASTSGKILIADS-NNQCVQIFSNDGQFKSRFG-IRGRSPG-QLQRPTGVAVHPSGDII 548
Query: 146 IADTMNMAIRKISDTGVTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLV 203
IAD N + S G K G G + GP + N +V +C + +
Sbjct: 549 IADYDNKWVSIFSSDGKF-----KTKIGSGKLMGPKGVSVDRNGHIIVVDNKACCVFI 601
Score = 32.7 bits (73), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 46/106 (43%), Gaps = 8/106 (7%)
Query: 85 PFSVAVSPSGELLVLDSENNSRPKLVA-GSPEGYYGHVDGRPRGARMNHPKGLAVDDRGN 143
P VAV PSG++++ D +N K V+ S +G + G ++ PKG++VD G+
Sbjct: 536 PTGVAVHPSGDIIIADYDN----KWVSIFSSDGKFKTKIG---SGKLMGPKGVSVDRNGH 588
Query: 144 IYIADTMNMAIRKISDTGVTTIAGGKWSRGVGHVDGPSEDAKFSND 189
I + D + G G G GP A SN+
Sbjct: 589 IIVVDNKACCVFIFQPNGKIVTRFGSRGNGDRQFAGPHFAAVNSNN 634
Score = 32.3 bits (72), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Query: 85 PFSVAVSPSGELLVLDSENNSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNI 144
P AV+ + E+++ D N+S K+ E + N P G+AVD GNI
Sbjct: 625 PHFAAVNSNNEIIITDFHNHS-VKVFNQEGEFMLKFGSNGEGNGQFNAPTGVAVDSNGNI 683
Query: 145 YIADTMNMAIRKISDTG 161
+AD N I+ +G
Sbjct: 684 IVADWGNSRIQVFDGSG 700
>sp|D2GXS7|TRIM2_AILME Tripartite motif-containing protein 2 OS=Ailuropoda melanoleuca
GN=TRIM2 PE=3 SV=1
Length = 744
Score = 34.7 bits (78), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 55/118 (46%), Gaps = 10/118 (8%)
Query: 88 VAVSPSGELLVLDSENNSRPKLVA--GSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIY 145
VA S SG++L+ DS NN ++ + G + +G + GR G ++ P G+AV G+I
Sbjct: 492 VAASTSGKILIADS-NNQCVQIFSNDGQFKSRFG-IRGRSPG-QLQRPTGVAVHPSGDII 548
Query: 146 IADTMNMAIRKISDTGVTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLV 203
IAD N + S G K G G + GP + N +V +C + +
Sbjct: 549 IADYDNKWVSIFSSDGKF-----KTKIGSGKLMGPKGVSVDRNGHIIVVDNKACCVFI 601
Score = 33.1 bits (74), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 48/110 (43%), Gaps = 8/110 (7%)
Query: 85 PFSVAVSPSGELLVLDSENNSRPKLVA-GSPEGYYGHVDGRPRGARMNHPKGLAVDDRGN 143
P VAV PSG++++ D +N K V+ S +G + G ++ PKG++VD G+
Sbjct: 536 PTGVAVHPSGDIIIADYDN----KWVSIFSSDGKFKTKIG---SGKLMGPKGVSVDRNGH 588
Query: 144 IYIADTMNMAIRKISDTGVTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVV 193
I + D + G G G GP A SN+ +V
Sbjct: 589 IIVVDNKACCVFIFQPNGKIVTRFGSRGNGDRQFAGPHFAAVNSNNEIIV 638
Score = 32.7 bits (73), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Query: 85 PFSVAVSPSGELLVLDSENNSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNI 144
P AV+ + E++V D N+S K+ E + N P G+AVD GNI
Sbjct: 625 PHFAAVNSNNEIIVTDFHNHS-VKVFNQEGEFMLKFGSNGEGNGQFNAPTGVAVDSNGNI 683
Query: 145 YIADTMNMAIRKISDTG 161
+AD N I+ +G
Sbjct: 684 IVADWGNSRIQVFDGSG 700
>sp|Q9VYN8|TENA_DROME Teneurin-a OS=Drosophila melanogaster GN=Ten-a PE=1 SV=2
Length = 3004
Score = 34.3 bits (77), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 36/71 (50%), Gaps = 10/71 (14%)
Query: 98 VLDSENNSRPKLVAG-----SPEGYYGHVDGRPRG-ARMNHPKGLAVDDRGNIYIADTMN 151
V D NS P + +G EG G DG P AR++HPKGLA+ +YIAD N
Sbjct: 1323 VKDPSINSDPVVGSGQRCIPGDEGNCG--DGGPALLARLSHPKGLAIAADRTMYIADGTN 1380
Query: 152 MAIRKISDTGV 162
IR + GV
Sbjct: 1381 --IRAVDPKGV 1389
>sp|Q9C040|TRIM2_HUMAN Tripartite motif-containing protein 2 OS=Homo sapiens GN=TRIM2 PE=1
SV=1
Length = 744
Score = 33.5 bits (75), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 55/118 (46%), Gaps = 10/118 (8%)
Query: 88 VAVSPSGELLVLDSENNSRPKLVA--GSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIY 145
VA S +G++L+ DS NN ++ + G + +G + GR G ++ P G+AV G+I
Sbjct: 492 VAASTNGKILIADS-NNQCVQIFSNDGQFKSRFG-IRGRSPG-QLQRPTGVAVHPSGDII 548
Query: 146 IADTMNMAIRKISDTGVTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLV 203
IAD N + S G K G G + GP + N +V +C + +
Sbjct: 549 IADYDNKWVSIFSSDGKF-----KTKIGSGKLMGPKGVSVDRNGHIIVVDNKACCVFI 601
Score = 32.7 bits (73), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 46/106 (43%), Gaps = 8/106 (7%)
Query: 85 PFSVAVSPSGELLVLDSENNSRPKLVA-GSPEGYYGHVDGRPRGARMNHPKGLAVDDRGN 143
P VAV PSG++++ D +N K V+ S +G + G ++ PKG++VD G+
Sbjct: 536 PTGVAVHPSGDIIIADYDN----KWVSIFSSDGKFKTKIG---SGKLMGPKGVSVDRNGH 588
Query: 144 IYIADTMNMAIRKISDTGVTTIAGGKWSRGVGHVDGPSEDAKFSND 189
I + D + G G G GP A SN+
Sbjct: 589 IIVVDNKACCVFIFQPNGKIVTRFGSRGNGDRQFAGPHFAAVNSNN 634
Score = 32.3 bits (72), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Query: 85 PFSVAVSPSGELLVLDSENNSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNI 144
P AV+ + E+++ D N+S K+ E + N P G+AVD GNI
Sbjct: 625 PHFAAVNSNNEIIITDFHNHS-VKVFNQEGEFMLKFGSNGEGNGQFNAPTGVAVDSNGNI 683
Query: 145 YIADTMNMAIRKISDTG 161
+AD N I+ +G
Sbjct: 684 IVADWGNSRIQVFDGSG 700
>sp|A4IF63|TRIM2_BOVIN Tripartite motif-containing protein 2 OS=Bos taurus GN=TRIM2 PE=2
SV=1
Length = 744
Score = 33.5 bits (75), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 55/118 (46%), Gaps = 10/118 (8%)
Query: 88 VAVSPSGELLVLDSENNSRPKLVA--GSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIY 145
VA S +G++L+ DS NN ++ + G + +G + GR G ++ P G+AV G+I
Sbjct: 492 VAASTNGKILIADS-NNQCVQIFSNDGQFKSRFG-IRGRSPG-QLQRPTGVAVHPSGDII 548
Query: 146 IADTMNMAIRKISDTGVTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLV 203
IAD N + S G K G G + GP + N +V +C + +
Sbjct: 549 IADYDNKWVSIFSSDGKF-----KTKIGSGKLMGPKGVSVDRNGHIIVVDNKACCVFI 601
Score = 33.1 bits (74), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 48/110 (43%), Gaps = 8/110 (7%)
Query: 85 PFSVAVSPSGELLVLDSENNSRPKLVA-GSPEGYYGHVDGRPRGARMNHPKGLAVDDRGN 143
P VAV PSG++++ D +N K V+ S +G + G ++ PKG++VD G+
Sbjct: 536 PTGVAVHPSGDIIIADYDN----KWVSIFSSDGKFKTKIG---SGKLMGPKGVSVDRNGH 588
Query: 144 IYIADTMNMAIRKISDTGVTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVV 193
I + D + G G G GP A SN+ +V
Sbjct: 589 IIVVDNKACCVFIFQPNGKIVTRFGSRGNGDRQFAGPHFAAVNSNNEIIV 638
Score = 32.7 bits (73), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Query: 85 PFSVAVSPSGELLVLDSENNSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNI 144
P AV+ + E++V D N+S K+ E + N P G+AVD GNI
Sbjct: 625 PHFAAVNSNNEIIVTDFHNHS-VKVFNQEGEFMLKFGSNGEGNGQFNAPTGVAVDSNGNI 683
Query: 145 YIADTMNMAIRKISDTG 161
+AD N I+ +G
Sbjct: 684 IVADWGNSRIQVFDGSG 700
>sp|P34611|NCL1_CAEEL B-box type zinc finger protein ncl-1 OS=Caenorhabditis elegans
GN=ncl-1 PE=1 SV=1
Length = 851
Score = 32.3 bits (72), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 52/124 (41%), Gaps = 14/124 (11%)
Query: 71 TVETVFEGSKFGMEPFSVAVSPSGELLVLDSENNSRPKLVAGSPEGYYGHVDGRPRGARM 130
+V + EG E F PS + R K++ G +G ++G+
Sbjct: 539 SVGGLLEGGNVDEEKFQTLFPPSRSQI-------KRQKMIYHCKFGEFGVMEGQ-----F 586
Query: 131 NHPKGLAVDDRGNIYIADTMNMAIRKISDTGVTTIAGGKWSRGVGHVDGPSEDA--KFSN 188
P G+AV+ +G+I +ADT N I+ G G+ + G + P+ A + +
Sbjct: 587 TEPSGVAVNGQGDIVVADTNNHRIQVFDKEGRFKFQFGECGKRDGQLLYPNRVAVNRTTG 646
Query: 189 DFDV 192
DF V
Sbjct: 647 DFVV 650
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.135 0.412
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 205,634,748
Number of Sequences: 539616
Number of extensions: 9636206
Number of successful extensions: 40328
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 62
Number of HSP's successfully gapped in prelim test: 167
Number of HSP's that attempted gapping in prelim test: 36641
Number of HSP's gapped (non-prelim): 2364
length of query: 495
length of database: 191,569,459
effective HSP length: 122
effective length of query: 373
effective length of database: 125,736,307
effective search space: 46899642511
effective search space used: 46899642511
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)