Query 011014
Match_columns 495
No_of_seqs 307 out of 2151
Neff 6.0
Searched_HMMs 29240
Date Mon Mar 25 19:01:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011014.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011014hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3kya_A Putative phosphatase; s 99.8 3.3E-20 1.1E-24 199.2 14.7 140 83-223 310-480 (496)
2 4hw6_A Hypothetical protein, I 99.8 7.5E-18 2.6E-22 177.5 21.2 167 82-258 227-431 (433)
3 4hw6_A Hypothetical protein, I 99.8 2.5E-18 8.5E-23 181.1 17.5 134 84-217 274-432 (433)
4 3kya_A Putative phosphatase; s 99.8 3.5E-18 1.2E-22 183.5 18.2 177 83-263 247-478 (496)
5 3fvz_A Peptidyl-glycine alpha- 99.8 1.6E-16 5.4E-21 158.6 26.4 214 34-260 24-322 (329)
6 3tc9_A Hypothetical hydrolase; 99.8 2E-17 6.7E-22 173.9 20.5 168 82-258 225-428 (430)
7 3tc9_A Hypothetical hydrolase; 99.7 5.1E-17 1.7E-21 170.7 18.4 133 83-217 270-429 (430)
8 3hrp_A Uncharacterized protein 99.7 1.4E-16 4.8E-21 165.9 19.0 167 81-257 217-407 (409)
9 3hrp_A Uncharacterized protein 99.7 2.7E-16 9.3E-21 163.7 20.1 132 83-217 266-409 (409)
10 3fvz_A Peptidyl-glycine alpha- 99.7 6.2E-16 2.1E-20 154.3 20.9 165 81-259 22-226 (329)
11 3v64_C Agrin; beta propeller, 99.6 5.5E-14 1.9E-18 143.3 26.5 149 83-257 116-272 (349)
12 3v65_B Low-density lipoprotein 99.6 7.1E-14 2.4E-18 144.4 25.7 148 83-257 159-315 (386)
13 3sov_A LRP-6, low-density lipo 99.6 1E-13 3.5E-18 140.1 25.5 150 83-258 79-236 (318)
14 3p5b_L Low density lipoprotein 99.6 1.7E-13 5.8E-18 142.4 26.8 151 82-257 158-317 (400)
15 1ijq_A LDL receptor, low-densi 99.6 1.7E-13 5.9E-18 137.3 25.9 150 82-257 76-235 (316)
16 1rwi_B Serine/threonine-protei 99.6 1.5E-13 5.2E-18 130.4 22.1 149 83-254 108-258 (270)
17 1npe_A Nidogen, entactin; glyc 99.6 4.9E-13 1.7E-17 128.9 25.4 150 83-258 79-236 (267)
18 1q7f_A NHL, brain tumor CG1071 99.6 2.7E-13 9.2E-18 130.6 23.4 150 82-255 76-233 (286)
19 3m0c_C LDL receptor, low-densi 99.6 2.6E-13 9E-18 153.2 26.5 150 82-257 470-629 (791)
20 3v64_C Agrin; beta propeller, 99.6 2.9E-13 9.9E-18 137.9 24.3 156 82-261 72-235 (349)
21 3v65_B Low-density lipoprotein 99.6 2.3E-13 7.9E-18 140.5 23.1 155 82-260 115-277 (386)
22 3s94_A LRP-6, low-density lipo 99.6 4.3E-13 1.5E-17 147.5 26.0 151 82-259 391-550 (619)
23 3p5b_L Low density lipoprotein 99.6 2.9E-13 1E-17 140.7 23.2 161 82-262 111-279 (400)
24 1ijq_A LDL receptor, low-densi 99.6 4.2E-13 1.5E-17 134.4 23.5 159 82-260 29-195 (316)
25 1q7f_A NHL, brain tumor CG1071 99.5 3.2E-13 1.1E-17 130.1 19.6 155 81-257 28-191 (286)
26 3m0c_C LDL receptor, low-densi 99.5 4.2E-13 1.4E-17 151.6 23.4 161 82-262 423-591 (791)
27 1rwi_B Serine/threonine-protei 99.5 1.6E-12 5.4E-17 123.4 23.4 150 82-256 66-218 (270)
28 1npe_A Nidogen, entactin; glyc 99.5 6.3E-13 2.2E-17 128.2 20.4 152 84-259 37-197 (267)
29 4a0p_A LRP6, LRP-6, low-densit 99.5 1.6E-12 5.4E-17 143.3 26.3 150 82-256 388-545 (628)
30 4a0p_A LRP6, LRP-6, low-densit 99.5 2E-12 6.9E-17 142.4 26.9 148 83-257 80-234 (628)
31 3sov_A LRP-6, low-density lipo 99.5 2.6E-12 9E-17 129.7 23.4 155 84-261 36-198 (318)
32 3s94_A LRP-6, low-density lipo 99.5 9.7E-13 3.3E-17 144.7 21.8 159 82-264 348-514 (619)
33 2qc5_A Streptogramin B lactona 99.4 4.3E-11 1.5E-15 114.2 25.7 151 82-256 103-256 (300)
34 2qc5_A Streptogramin B lactona 99.4 3.8E-11 1.3E-15 114.6 25.0 149 82-256 145-296 (300)
35 1n7d_A LDL receptor, low-densi 99.4 1.2E-12 4.2E-17 145.7 13.2 151 82-257 452-611 (699)
36 2fp8_A Strictosidine synthase; 99.4 6.8E-12 2.3E-16 124.4 15.1 143 83-249 80-248 (322)
37 1n7d_A LDL receptor, low-densi 99.4 3.8E-12 1.3E-16 141.7 14.2 161 82-261 405-572 (699)
38 2z2n_A Virginiamycin B lyase; 99.3 4E-10 1.4E-14 107.4 25.2 151 82-256 98-251 (299)
39 2fp8_A Strictosidine synthase; 99.3 1.2E-11 4.1E-16 122.6 15.0 164 82-260 18-216 (322)
40 2z2n_A Virginiamycin B lyase; 99.3 5.4E-10 1.9E-14 106.4 25.7 150 82-257 140-292 (299)
41 2p4o_A Hypothetical protein; p 99.3 3E-10 1E-14 112.2 23.8 156 83-256 72-238 (306)
42 2p4o_A Hypothetical protein; p 99.3 2E-10 6.9E-15 113.5 20.6 151 83-260 32-198 (306)
43 3e5z_A Putative gluconolactona 99.2 8.5E-10 2.9E-14 106.9 19.0 148 83-254 69-240 (296)
44 2ism_A Putative oxidoreductase 99.2 1.5E-09 5.3E-14 110.6 20.2 171 83-262 75-299 (352)
45 3e5z_A Putative gluconolactona 99.1 1.6E-09 5.4E-14 105.1 18.5 154 83-259 28-201 (296)
46 3g4e_A Regucalcin; six bladed 99.1 2.9E-09 9.9E-14 104.3 18.3 149 83-256 54-225 (297)
47 3dr2_A Exported gluconolactona 99.1 4.1E-09 1.4E-13 103.4 18.2 153 83-258 45-222 (305)
48 3g4e_A Regucalcin; six bladed 99.1 6.8E-09 2.3E-13 101.7 19.0 146 82-249 97-262 (297)
49 3dr2_A Exported gluconolactona 99.1 3.3E-09 1.1E-13 104.1 16.6 151 83-262 86-267 (305)
50 1pjx_A Dfpase, DIISOPROPYLFLUO 99.1 3.8E-09 1.3E-13 101.9 16.6 150 83-256 71-252 (314)
51 2qe8_A Uncharacterized protein 99.1 4E-09 1.4E-13 105.8 17.2 172 81-257 65-275 (343)
52 1pjx_A Dfpase, DIISOPROPYLFLUO 99.0 3.8E-09 1.3E-13 101.9 16.1 158 83-257 18-204 (314)
53 2ism_A Putative oxidoreductase 99.0 3.1E-09 1.1E-13 108.3 15.7 155 82-253 30-226 (352)
54 2qe8_A Uncharacterized protein 99.0 1.4E-08 4.6E-13 101.9 19.8 160 83-256 17-222 (343)
55 3a9g_A Putative uncharacterize 99.0 5.6E-09 1.9E-13 106.8 17.0 164 69-253 18-221 (354)
56 3dsm_A Uncharacterized protein 99.0 4.5E-08 1.6E-12 97.6 21.2 143 83-248 84-244 (328)
57 3sre_A PON1, serum paraoxonase 98.9 1.6E-08 5.4E-13 104.3 16.9 147 83-253 112-291 (355)
58 3dsm_A Uncharacterized protein 98.9 1E-07 3.5E-12 95.0 21.2 148 84-261 132-301 (328)
59 2dg1_A DRP35, lactonase; beta 98.9 2.2E-07 7.4E-12 90.9 23.0 149 83-256 87-259 (333)
60 3no2_A Uncharacterized protein 98.8 3.9E-07 1.3E-11 89.4 21.6 143 84-250 78-233 (276)
61 3a9g_A Putative uncharacterize 98.8 6.9E-07 2.3E-11 91.3 23.7 170 83-261 73-297 (354)
62 3no2_A Uncharacterized protein 98.8 3.5E-07 1.2E-11 89.8 19.7 151 84-256 38-191 (276)
63 2p9w_A MAL S 1 allergenic prot 98.8 2.6E-07 8.8E-12 94.5 19.1 122 130-264 136-267 (334)
64 2dg1_A DRP35, lactonase; beta 98.8 3.4E-07 1.1E-11 89.5 19.2 154 83-258 45-211 (333)
65 3vgz_A Uncharacterized protein 98.7 3.4E-06 1.2E-10 81.9 24.9 152 83-254 89-256 (353)
66 2g8s_A Glucose/sorbosone dehyd 98.7 3E-07 1E-11 93.7 18.0 167 68-252 6-220 (353)
67 3das_A Putative oxidoreductase 98.7 6.1E-07 2.1E-11 92.2 19.5 156 82-253 31-225 (347)
68 1cru_A Protein (soluble quinop 98.6 5.5E-07 1.9E-11 95.3 17.4 169 67-253 14-251 (454)
69 2ghs_A AGR_C_1268P; regucalcin 98.6 1.7E-06 5.8E-11 86.1 18.8 146 83-251 134-294 (326)
70 2ghs_A AGR_C_1268P; regucalcin 98.6 1E-06 3.5E-11 87.7 16.7 148 83-256 90-256 (326)
71 3hfq_A Uncharacterized protein 98.6 2.6E-06 9E-11 83.6 19.4 165 83-259 40-217 (347)
72 3hfq_A Uncharacterized protein 98.6 1.2E-06 4.1E-11 86.1 16.4 161 84-256 142-313 (347)
73 2p9w_A MAL S 1 allergenic prot 98.5 2.1E-06 7.3E-11 87.7 15.1 166 83-256 13-211 (334)
74 3vgz_A Uncharacterized protein 98.4 6E-05 2E-09 73.1 24.4 150 85-254 143-297 (353)
75 2g8s_A Glucose/sorbosone dehyd 98.4 3.2E-06 1.1E-10 86.0 14.6 173 83-257 130-351 (353)
76 3scy_A Hypothetical bacterial 98.4 1.9E-05 6.4E-10 78.1 19.0 162 84-259 156-336 (361)
77 2iwa_A Glutamine cyclotransfer 98.4 3.4E-05 1.2E-09 76.4 20.4 154 83-261 66-238 (266)
78 3sre_A PON1, serum paraoxonase 98.3 1.1E-05 3.8E-10 83.0 16.3 115 131-260 112-252 (355)
79 3u4y_A Uncharacterized protein 98.2 3.4E-05 1.2E-09 74.6 16.4 155 82-254 127-298 (331)
80 3nol_A Glutamine cyclotransfer 98.2 0.00018 6E-09 71.2 20.8 149 85-259 89-255 (262)
81 3das_A Putative oxidoreductase 98.1 0.00013 4.4E-09 74.9 19.8 154 84-250 141-328 (347)
82 2iwa_A Glutamine cyclotransfer 98.1 9.4E-05 3.2E-09 73.2 18.1 145 84-258 22-179 (266)
83 3mbr_X Glutamine cyclotransfer 98.1 0.00024 8.2E-09 69.5 20.6 152 84-260 66-235 (243)
84 3qqz_A Putative uncharacterize 98.1 0.0003 1E-08 69.2 21.2 158 83-253 70-246 (255)
85 3nok_A Glutaminyl cyclase; bet 98.1 0.00011 3.7E-09 73.0 16.9 148 85-257 98-263 (268)
86 3qqz_A Putative uncharacterize 98.0 0.00033 1.1E-08 68.8 19.0 125 85-218 123-253 (255)
87 1ri6_A Putative isomerase YBHE 97.8 0.00037 1.3E-08 66.8 15.9 158 83-254 129-302 (343)
88 1jof_A Carboxy-CIS,CIS-muconat 97.8 0.00049 1.7E-08 68.7 17.3 166 83-256 145-337 (365)
89 1l0q_A Surface layer protein; 97.8 0.0023 8E-08 63.1 21.9 143 84-253 33-182 (391)
90 3u4y_A Uncharacterized protein 97.8 0.00076 2.6E-08 65.0 17.9 140 82-235 175-321 (331)
91 1ri6_A Putative isomerase YBHE 97.8 0.00049 1.7E-08 66.0 16.1 148 83-254 38-203 (343)
92 3scy_A Hypothetical bacterial 97.8 0.0027 9.3E-08 62.4 21.9 159 82-254 99-285 (361)
93 1l0q_A Surface layer protein; 97.6 0.0072 2.5E-07 59.5 21.5 143 84-253 75-226 (391)
94 1nir_A Nitrite reductase; hemo 97.6 0.0064 2.2E-07 65.1 22.6 160 84-260 180-354 (543)
95 4a9v_A PHOX; hydrolase, beta-p 97.6 0.00058 2E-08 74.3 13.7 63 128-205 473-549 (592)
96 2wg3_C Hedgehog-interacting pr 97.6 0.0014 4.9E-08 69.5 16.4 162 69-248 3-242 (463)
97 1cru_A Protein (soluble quinop 97.5 0.00041 1.4E-08 73.2 12.0 111 129-250 25-164 (454)
98 2mad_H Methylamine dehydrogena 97.5 0.01 3.5E-07 60.5 21.6 62 192-253 272-343 (373)
99 1jof_A Carboxy-CIS,CIS-muconat 97.5 0.0032 1.1E-07 62.7 16.5 107 131-251 145-277 (365)
100 3nok_A Glutaminyl cyclase; bet 97.4 0.0053 1.8E-07 60.8 17.4 137 85-256 57-206 (268)
101 3mbr_X Glutamine cyclotransfer 97.4 0.0082 2.8E-07 58.6 18.2 142 84-256 22-175 (243)
102 3c75_H MADH, methylamine dehyd 97.3 0.012 4.1E-07 61.8 19.9 78 83-161 119-209 (426)
103 1jmx_B Amine dehydrogenase; ox 97.3 0.0024 8.2E-08 61.4 13.5 143 85-246 2-164 (349)
104 3bws_A Protein LP49; two-domai 97.3 0.0038 1.3E-07 62.5 14.5 148 83-250 123-275 (433)
105 1qks_A Cytochrome CD1 nitrite 97.3 0.017 5.9E-07 62.6 20.6 156 83-254 197-367 (567)
106 1pby_B Quinohemoprotein amine 97.3 0.0085 2.9E-07 57.0 16.3 115 84-222 35-167 (337)
107 1fwx_A Nitrous oxide reductase 97.1 0.019 6.7E-07 62.7 19.3 196 35-260 102-361 (595)
108 4a9v_A PHOX; hydrolase, beta-p 97.1 0.0033 1.1E-07 68.5 13.1 120 127-248 380-550 (592)
109 1nir_A Nitrite reductase; hemo 97.1 0.043 1.5E-06 58.6 21.6 156 82-258 221-399 (543)
110 3bws_A Protein LP49; two-domai 97.1 0.049 1.7E-06 54.3 20.7 146 83-254 254-426 (433)
111 2oiz_A Aromatic amine dehydrog 97.1 0.015 5.1E-07 58.4 16.8 76 83-160 51-139 (361)
112 1mda_H Methylamine dehydrogena 97.1 0.026 8.8E-07 58.0 18.7 76 83-159 66-156 (368)
113 3nol_A Glutamine cyclotransfer 97.1 0.021 7.3E-07 56.3 17.3 123 84-216 128-254 (262)
114 3sjl_D Methylamine dehydrogena 96.9 0.013 4.5E-07 60.7 15.3 113 83-211 79-212 (386)
115 3amr_A 3-phytase; beta-propell 96.8 0.15 5E-06 52.4 21.4 112 128-261 125-262 (355)
116 3q6k_A 43.2 kDa salivary prote 96.7 0.11 3.9E-06 53.7 20.3 195 38-251 91-345 (381)
117 1pby_B Quinohemoprotein amine 96.7 0.073 2.5E-06 50.4 17.3 131 92-253 9-156 (337)
118 3c75_H MADH, methylamine dehyd 96.7 0.03 1E-06 58.7 15.5 79 132-222 120-213 (426)
119 3sjl_D Methylamine dehydrogena 96.6 0.039 1.3E-06 57.2 15.5 80 132-222 80-173 (386)
120 2ece_A 462AA long hypothetical 96.5 0.028 9.6E-07 59.7 14.2 66 187-253 321-405 (462)
121 3zwu_A Alkaline phosphatase PH 96.4 0.024 8.3E-07 62.0 13.3 63 127-204 472-548 (592)
122 1jmx_B Amine dehydrogenase; ox 96.4 0.024 8.1E-07 54.3 11.9 99 133-249 2-112 (349)
123 3hxj_A Pyrrolo-quinoline quino 96.4 0.05 1.7E-06 52.0 13.9 132 85-248 179-313 (330)
124 1fwx_A Nitrous oxide reductase 96.3 0.037 1.3E-06 60.5 14.0 116 131-253 277-413 (595)
125 2oiz_A Aromatic amine dehydrog 96.3 0.056 1.9E-06 54.2 14.5 78 132-222 52-144 (361)
126 2wg3_C Hedgehog-interacting pr 96.3 0.044 1.5E-06 58.0 14.2 116 83-215 217-370 (463)
127 2mad_H Methylamine dehydrogena 96.2 0.11 3.8E-06 52.7 16.1 86 132-236 265-370 (373)
128 3hxj_A Pyrrolo-quinoline quino 96.0 0.077 2.6E-06 50.7 13.0 137 86-253 140-277 (330)
129 3s25_A Hypothetical 7-bladed b 95.9 0.075 2.6E-06 52.9 13.0 100 138-261 152-256 (302)
130 3amr_A 3-phytase; beta-propell 95.4 0.06 2E-06 55.3 9.9 118 83-218 128-263 (355)
131 1mda_H Methylamine dehydrogena 95.3 0.18 6.3E-06 51.6 13.4 107 132-255 67-189 (368)
132 4a2l_A BT_4663, two-component 95.3 0.98 3.4E-05 49.8 20.2 140 83-247 88-232 (795)
133 3v9f_A Two-component system se 95.1 1.8 6.3E-05 47.5 21.7 147 83-253 450-604 (781)
134 3s25_A Hypothetical 7-bladed b 95.0 1 3.5E-05 44.6 17.4 104 133-261 186-294 (302)
135 1qks_A Cytochrome CD1 nitrite 94.9 0.15 5E-06 55.2 11.8 97 138-254 163-269 (567)
136 3ow8_A WD repeat-containing pr 94.8 1.9 6.4E-05 41.8 18.6 144 84-253 166-314 (321)
137 3ow8_A WD repeat-containing pr 94.6 3 0.0001 40.3 19.6 149 84-259 124-277 (321)
138 1tl2_A L10, protein (tachylect 94.4 0.19 6.5E-06 48.7 10.0 101 84-214 42-159 (236)
139 1gxr_A ESG1, transducin-like e 94.0 2.6 9E-05 39.3 17.2 143 84-253 185-330 (337)
140 2ymu_A WD-40 repeat protein; u 93.9 1.5 5.1E-05 45.2 16.6 129 84-237 428-559 (577)
141 1got_B GT-beta; complex (GTP-b 93.9 2.7 9.3E-05 40.7 17.5 73 133-221 229-304 (340)
142 3q6k_A 43.2 kDa salivary prote 93.8 0.59 2E-05 48.3 13.1 101 84-206 221-342 (381)
143 4a2l_A BT_4663, two-component 93.7 1.6 5.4E-05 48.2 17.3 150 84-260 499-657 (795)
144 2ece_A 462AA long hypothetical 93.7 1 3.5E-05 47.7 14.7 115 130-259 137-288 (462)
145 1gxr_A ESG1, transducin-like e 93.6 4.7 0.00016 37.5 19.1 143 84-253 143-289 (337)
146 3zwu_A Alkaline phosphatase PH 93.4 0.66 2.2E-05 50.7 13.1 110 127-237 380-540 (592)
147 2ymu_A WD-40 repeat protein; u 93.3 3.4 0.00012 42.4 18.1 143 84-253 346-491 (577)
148 4ery_A WD repeat-containing pr 93.2 5.7 0.0002 37.3 19.0 144 84-253 25-173 (312)
149 3v9f_A Two-component system se 93.0 2.3 7.9E-05 46.7 17.1 151 83-261 495-655 (781)
150 1sq9_A Antiviral protein SKI8; 92.3 5.3 0.00018 38.6 16.9 129 84-221 188-325 (397)
151 1erj_A Transcriptional repress 92.3 7.1 0.00024 38.6 18.1 147 85-258 126-284 (393)
152 1tl2_A L10, protein (tachylect 92.2 0.99 3.4E-05 43.7 11.0 100 130-253 40-156 (236)
153 2aq5_A Coronin-1A; WD40 repeat 92.0 9.9 0.00034 37.2 20.1 150 84-254 133-293 (402)
154 4gqb_B Methylosome protein 50; 91.3 5.9 0.0002 39.0 16.1 147 85-253 130-282 (344)
155 1vyh_C Platelet-activating fac 91.2 5.7 0.00019 39.7 16.2 148 84-258 110-262 (410)
156 1vyh_C Platelet-activating fac 90.6 12 0.00043 37.1 18.1 114 84-221 152-268 (410)
157 3vl1_A 26S proteasome regulato 90.3 9.7 0.00033 37.1 16.6 166 83-258 140-319 (420)
158 4ery_A WD repeat-containing pr 90.3 12 0.0004 35.1 18.7 144 84-253 67-216 (312)
159 1r5m_A SIR4-interacting protei 90.2 8.4 0.00029 37.1 15.9 112 84-220 249-363 (425)
160 1k8k_C P40, ARP2/3 complex 41 90.1 8.3 0.00028 36.6 15.5 145 85-253 11-166 (372)
161 1r5m_A SIR4-interacting protei 89.7 12 0.00041 35.9 16.5 72 132-221 110-183 (425)
162 2ynn_A Coatomer subunit beta'; 89.6 13 0.00045 35.1 16.5 149 84-258 15-169 (304)
163 3ei3_B DNA damage-binding prot 89.4 11 0.00039 36.3 16.2 149 84-253 75-229 (383)
164 3zwl_B Eukaryotic translation 89.1 15 0.0005 34.5 18.0 143 84-253 177-339 (369)
165 4g56_B MGC81050 protein; prote 88.6 6.2 0.00021 38.7 13.7 147 85-253 142-294 (357)
166 3zwl_B Eukaryotic translation 88.5 16 0.00055 34.2 16.8 110 84-219 34-152 (369)
167 4g56_B MGC81050 protein; prote 88.0 9 0.00031 37.5 14.4 145 85-253 97-251 (357)
168 4gqb_B Methylosome protein 50; 87.9 15 0.00052 35.9 16.1 149 85-258 85-243 (344)
169 1k8k_C P40, ARP2/3 complex 41 87.6 12 0.00041 35.4 14.8 145 83-253 97-267 (372)
170 4e54_B DNA damage-binding prot 87.6 24 0.00082 35.1 20.3 105 133-253 167-275 (435)
171 2xyi_A Probable histone-bindin 87.4 16 0.00056 36.4 16.3 146 84-253 233-403 (430)
172 3ei3_B DNA damage-binding prot 87.0 22 0.00075 34.2 16.5 147 84-253 120-275 (383)
173 3sfz_A APAF-1, apoptotic pepti 86.8 20 0.00069 40.9 18.4 115 84-222 617-736 (1249)
174 3iz6_a 40S ribosomal protein R 86.3 26 0.00088 34.3 16.8 120 84-219 251-376 (380)
175 2xyi_A Probable histone-bindin 86.2 24 0.00083 35.1 16.7 158 83-253 129-302 (430)
176 3dm0_A Maltose-binding peripla 86.0 29 0.00098 37.1 18.2 149 84-259 432-590 (694)
177 2ojh_A Uncharacterized protein 85.8 19 0.00066 32.3 14.7 127 92-253 20-153 (297)
178 2aq5_A Coronin-1A; WD40 repeat 85.3 23 0.00079 34.5 15.8 73 132-222 83-167 (402)
179 3ott_A Two-component system se 85.0 23 0.00078 38.6 17.0 117 84-223 473-591 (758)
180 3ott_A Two-component system se 84.8 25 0.00084 38.3 17.2 144 84-253 420-579 (758)
181 3iz6_a 40S ribosomal protein R 84.6 31 0.0011 33.6 21.8 112 133-258 252-372 (380)
182 4h5i_A Guanine nucleotide-exch 83.2 5.5 0.00019 39.3 10.1 71 133-220 272-345 (365)
183 2pm9_A Protein WEB1, protein t 83.1 21 0.00071 34.4 14.2 153 84-258 167-334 (416)
184 3fm0_A Protein CIAO1; WDR39,SG 82.9 23 0.0008 34.0 14.5 111 85-219 19-137 (345)
185 2pbi_B Guanine nucleotide-bind 82.8 36 0.0012 32.9 17.7 103 133-253 243-350 (354)
186 4gga_A P55CDC, cell division c 82.8 23 0.00078 35.0 14.7 27 134-160 151-177 (420)
187 3lrv_A PRE-mRNA-splicing facto 81.8 37 0.0013 32.4 17.7 146 84-254 127-286 (343)
188 2vdu_B TRNA (guanine-N(7)-)-me 81.7 20 0.00068 35.8 13.9 119 83-221 150-274 (450)
189 4aez_A CDC20, WD repeat-contai 81.5 42 0.0014 32.8 18.9 106 132-259 261-378 (401)
190 1got_B GT-beta; complex (GTP-b 81.0 40 0.0014 32.2 18.8 101 133-253 187-294 (340)
191 2pm9_A Protein WEB1, protein t 81.0 31 0.0011 33.2 14.6 115 84-220 216-339 (416)
192 3dw8_B Serine/threonine-protei 80.8 43 0.0015 32.5 15.9 82 84-167 228-325 (447)
193 4h5i_A Guanine nucleotide-exch 80.2 46 0.0016 32.5 15.7 154 84-258 178-340 (365)
194 3vl1_A 26S proteasome regulato 80.1 28 0.00094 33.7 13.9 72 132-221 141-215 (420)
195 3k26_A Polycomb protein EED; W 79.9 39 0.0013 31.5 15.0 101 133-253 72-185 (366)
196 3frx_A Guanine nucleotide-bind 79.9 42 0.0014 31.8 18.2 149 85-258 68-224 (319)
197 2pbi_B Guanine nucleotide-bind 79.9 45 0.0015 32.2 18.2 150 84-253 108-264 (354)
198 1erj_A Transcriptional repress 79.9 48 0.0016 32.4 19.0 106 133-258 126-235 (393)
199 1sq9_A Antiviral protein SKI8; 79.4 40 0.0014 32.2 14.7 78 131-221 187-270 (397)
200 3dwl_C Actin-related protein 2 79.2 15 0.0005 35.2 11.4 111 84-217 57-176 (377)
201 2vdu_B TRNA (guanine-N(7)-)-me 77.9 58 0.002 32.3 18.1 147 84-237 197-364 (450)
202 4e54_B DNA damage-binding prot 77.8 29 0.001 34.5 13.6 112 85-220 167-284 (435)
203 3dm0_A Maltose-binding peripla 77.8 68 0.0023 34.1 17.3 133 84-237 474-612 (694)
204 3v7d_B Cell division control p 76.8 61 0.0021 32.0 17.9 71 132-222 312-385 (464)
205 3k26_A Polycomb protein EED; W 76.0 51 0.0017 30.7 16.7 116 84-220 71-194 (366)
206 2hqs_A Protein TOLB; TOLB, PAL 75.2 69 0.0024 31.9 18.5 116 84-223 224-349 (415)
207 1nr0_A Actin interacting prote 74.6 22 0.00077 37.4 12.2 121 84-221 149-273 (611)
208 3mmy_A MRNA export factor; mRN 74.5 45 0.0015 31.0 13.2 114 84-220 41-162 (368)
209 1pgu_A Actin interacting prote 73.9 80 0.0027 32.0 18.0 105 132-253 490-607 (615)
210 3odt_A Protein DOA1; ubiquitin 73.2 52 0.0018 29.9 13.1 111 84-221 186-299 (313)
211 3dwl_C Actin-related protein 2 72.6 19 0.00064 34.5 10.1 159 84-253 102-274 (377)
212 3mkq_A Coatomer beta'-subunit; 72.4 1.1E+02 0.0036 32.7 23.4 114 84-221 142-262 (814)
213 3frx_A Guanine nucleotide-bind 72.0 67 0.0023 30.3 16.3 73 133-223 68-143 (319)
214 3azo_A Aminopeptidase; POP fam 70.3 1.1E+02 0.0037 32.0 16.6 81 132-222 243-329 (662)
215 2ojh_A Uncharacterized protein 70.0 60 0.002 28.9 18.5 143 84-253 43-197 (297)
216 4ggc_A P55CDC, cell division c 69.0 69 0.0024 29.2 15.9 32 134-165 71-105 (318)
217 4aow_A Guanine nucleotide-bind 68.9 72 0.0025 29.4 17.5 76 84-161 40-117 (340)
218 3i2n_A WD repeat-containing pr 68.7 47 0.0016 30.9 11.8 100 138-258 176-288 (357)
219 3gre_A Serine/threonine-protei 67.9 83 0.0028 30.7 14.0 29 132-160 216-244 (437)
220 3f3f_A Nucleoporin SEH1; struc 67.5 42 0.0014 30.6 11.0 114 84-220 13-145 (351)
221 3gre_A Serine/threonine-protei 67.2 70 0.0024 31.2 13.3 161 84-253 65-238 (437)
222 3dw8_B Serine/threonine-protei 66.1 98 0.0034 29.9 15.9 126 84-218 179-315 (447)
223 3v7d_B Cell division control p 65.4 1.1E+02 0.0037 30.1 17.1 94 134-250 356-453 (464)
224 4aow_A Guanine nucleotide-bind 65.1 86 0.0029 28.9 17.8 29 133-161 218-246 (340)
225 2xzm_R RACK1; ribosome, transl 64.5 98 0.0034 29.3 13.5 70 133-220 79-151 (343)
226 3vu4_A KMHSV2; beta-propeller 64.2 94 0.0032 29.9 13.4 72 132-219 197-272 (355)
227 1nr0_A Actin interacting prote 63.5 1.5E+02 0.005 31.0 19.7 79 84-165 192-277 (611)
228 3o4h_A Acylamino-acid-releasin 63.4 56 0.0019 33.7 12.2 71 134-222 153-231 (582)
229 3azo_A Aminopeptidase; POP fam 62.4 1.5E+02 0.0051 30.8 15.5 73 133-222 190-278 (662)
230 3vu4_A KMHSV2; beta-propeller 61.4 1.2E+02 0.004 29.2 14.9 72 84-159 197-269 (355)
231 4aez_A CDC20, WD repeat-contai 59.8 1.3E+02 0.0044 29.1 18.7 73 132-221 219-296 (401)
232 2z3z_A Dipeptidyl aminopeptida 59.6 1.7E+02 0.006 30.6 20.4 71 134-222 313-395 (706)
233 3f3f_A Nucleoporin SEH1; struc 59.3 1E+02 0.0035 27.9 13.2 108 133-258 14-140 (351)
234 2j04_A TAU60, YPL007P, hypothe 58.5 48 0.0017 36.0 10.8 117 83-221 86-214 (588)
235 1pgu_A Actin interacting prote 58.4 1.6E+02 0.0054 29.7 19.0 145 84-253 118-276 (615)
236 2z3z_A Dipeptidyl aminopeptida 57.8 1.5E+02 0.005 31.2 14.5 65 84-159 83-148 (706)
237 4a11_B DNA excision repair pro 57.4 1.3E+02 0.0044 28.4 17.3 150 84-253 45-211 (408)
238 2oaj_A Protein SNI1; WD40 repe 57.3 1.4E+02 0.0049 33.3 14.9 71 87-158 440-516 (902)
239 2oit_A Nucleoporin 214KDA; NH2 56.9 93 0.0032 31.4 12.3 121 84-221 94-226 (434)
240 3mkq_A Coatomer beta'-subunit; 56.6 2E+02 0.007 30.4 23.6 115 84-221 99-220 (814)
241 2xzm_R RACK1; ribosome, transl 56.5 1.3E+02 0.0046 28.3 18.0 71 85-161 79-149 (343)
242 3mmy_A MRNA export factor; mRN 55.1 1.3E+02 0.0044 27.7 12.8 103 133-253 42-153 (368)
243 3sfz_A APAF-1, apoptotic pepti 54.6 2.8E+02 0.0095 31.4 22.1 34 189-223 1006-1039(1249)
244 2hqs_A Protein TOLB; TOLB, PAL 52.6 1.8E+02 0.0063 28.7 19.7 140 84-248 180-330 (415)
245 3jro_A Fusion protein of prote 52.3 1.8E+02 0.0063 31.4 14.4 147 84-253 101-278 (753)
246 2hes_X YDR267CP; beta-propelle 49.5 1.7E+02 0.0059 27.5 17.2 150 84-253 60-223 (330)
247 2ecf_A Dipeptidyl peptidase IV 49.2 2.6E+02 0.0088 29.4 16.2 26 133-160 111-137 (741)
248 1yfq_A Cell cycle arrest prote 48.1 1.4E+02 0.0048 27.4 11.1 100 133-253 14-124 (342)
249 3odt_A Protein DOA1; ubiquitin 47.2 1.6E+02 0.0055 26.5 16.9 142 84-253 61-207 (313)
250 3q7m_A Lipoprotein YFGL, BAMB; 46.8 2E+02 0.0068 27.4 14.7 51 198-253 239-289 (376)
251 3fm0_A Protein CIAO1; WDR39,SG 44.8 2.1E+02 0.0071 27.1 21.8 147 84-257 63-221 (345)
252 3jrp_A Fusion protein of prote 44.3 2E+02 0.0067 26.7 15.5 118 83-219 102-241 (379)
253 1kb0_A Quinohemoprotein alcoho 42.5 3.5E+02 0.012 29.1 15.6 26 195-221 485-510 (677)
254 2oaj_A Protein SNI1; WD40 repe 41.2 4.1E+02 0.014 29.5 18.3 111 84-221 19-132 (902)
255 2ecf_A Dipeptidyl peptidase IV 39.8 3.2E+02 0.011 28.7 13.6 119 131-254 37-185 (741)
256 2ovr_B FBW7, F-BOX/WD repeat p 38.8 2.8E+02 0.0097 26.9 17.1 29 135-165 324-355 (445)
257 2hes_X YDR267CP; beta-propelle 38.5 2.5E+02 0.0087 26.3 14.2 70 84-159 109-182 (330)
258 3o4h_A Acylamino-acid-releasin 38.2 3.4E+02 0.012 27.7 18.4 116 86-219 153-276 (582)
259 3lrv_A PRE-mRNA-splicing facto 38.1 2.6E+02 0.0088 26.2 17.7 105 133-258 128-241 (343)
260 2j04_A TAU60, YPL007P, hypothe 37.8 4.2E+02 0.014 28.6 17.7 74 133-220 88-162 (588)
261 2ynn_A Coatomer subunit beta'; 37.7 2.5E+02 0.0085 25.9 22.9 144 85-253 143-295 (304)
262 1k32_A Tricorn protease; prote 36.8 1.6E+02 0.0056 33.1 11.2 109 86-222 25-147 (1045)
263 3i2n_A WD repeat-containing pr 36.6 2.5E+02 0.0086 25.7 14.1 109 90-218 176-291 (357)
264 1yfq_A Cell cycle arrest prote 36.3 2.5E+02 0.0087 25.6 17.0 124 83-222 151-286 (342)
265 3sbq_A Nitrous-oxide reductase 35.8 48 0.0016 36.3 6.1 83 131-218 323-408 (638)
266 2ad6_A Methanol dehydrogenase 35.7 4.1E+02 0.014 27.9 16.6 24 197-221 474-497 (571)
267 1kv9_A Type II quinohemoprotei 35.6 4.4E+02 0.015 28.2 14.8 140 88-248 318-519 (668)
268 3jrp_A Fusion protein of prote 35.5 2.7E+02 0.0092 25.7 16.6 28 132-159 103-132 (379)
269 3pe7_A Oligogalacturonate lyas 34.6 2.9E+02 0.01 25.9 15.7 27 135-161 242-273 (388)
270 3jro_A Fusion protein of prote 33.8 4.7E+02 0.016 28.0 17.0 28 132-159 101-130 (753)
271 2ovr_B FBW7, F-BOX/WD repeat p 33.5 3.4E+02 0.012 26.3 15.2 52 198-253 288-341 (445)
272 4a5s_A Dipeptidyl peptidase 4 32.3 1.4E+02 0.0046 32.2 9.2 103 88-218 31-151 (740)
273 1yiq_A Quinohemoprotein alcoho 31.3 4.6E+02 0.016 28.2 13.3 26 195-221 483-508 (689)
274 4b8c_D Glucose-repressible alc 31.2 9.7 0.00033 42.0 -0.2 12 378-390 31-42 (727)
275 2j04_B YDR362CP, TAU91; beta p 30.5 1.3E+02 0.0043 31.6 8.4 68 134-219 359-429 (524)
276 3bg1_A Protein SEC13 homolog; 28.8 3.6E+02 0.012 25.0 10.7 107 85-219 16-137 (316)
277 2pm7_B Protein transport prote 28.6 3.4E+02 0.012 24.8 12.0 103 134-253 13-125 (297)
278 4a11_B DNA excision repair pro 28.5 3.6E+02 0.012 25.1 19.6 29 132-160 247-275 (408)
279 3bg1_A Protein SEC13 homolog; 26.2 3.3E+02 0.011 25.3 9.8 26 134-159 17-42 (316)
280 3sbq_A Nitrous-oxide reductase 25.6 1.2E+02 0.0043 33.0 7.2 75 83-158 323-405 (638)
281 1k32_A Tricorn protease; prote 25.6 7.3E+02 0.025 27.6 16.1 97 132-247 380-490 (1045)
282 4h3o_A Lectin; cadmium, plant 24.8 2.8E+02 0.0095 22.4 12.3 54 86-155 21-74 (105)
283 1xfd_A DIP, dipeptidyl aminope 23.5 3E+02 0.01 28.7 9.9 30 132-161 62-100 (723)
284 1z68_A Fibroblast activation p 21.1 5E+02 0.017 27.1 11.0 29 133-161 62-99 (719)
No 1
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=99.82 E-value=3.3e-20 Score=199.17 Aligned_cols=140 Identities=25% Similarity=0.317 Sum_probs=113.8
Q ss_pred CCceEEEEcCCCc-EEEEECCCCeeEEEE-cCCC------------CccccccCCCcCccccCCcc-eEEEc-------C
Q 011014 83 MEPFSVAVSPSGE-LLVLDSENNSRPKLV-AGSP------------EGYYGHVDGRPRGARMNHPK-GLAVD-------D 140 (495)
Q Consensus 83 ~~P~GIAVd~dG~-LyVaDs~n~~ii~iv-aGs~------------~g~~G~~dG~~~~a~f~~P~-GIAVD-------~ 140 (495)
..|.+||++++|+ |||+|+.+|++.++- .+.. .+..|+.||.+..++|+.|. |+++| .
T Consensus 310 ~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~~~~ 389 (496)
T 3kya_A 310 SWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVFVKNPDYTGEE 389 (496)
T ss_dssp SCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEEEECTTCCSSC
T ss_pred CCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEEEEEccccccccC
Confidence 4699999999998 899999999666642 2211 14456667878889999999 89998 6
Q ss_pred CCCEEEEECCCCEEEEEcCCC-cEEEecCcc------cCCCCCCCC-CCcCcccCCCceEEEECC-CCeEEEEECCCCeE
Q 011014 141 RGNIYIADTMNMAIRKISDTG-VTTIAGGKW------SRGVGHVDG-PSEDAKFSNDFDVVYVGS-SCSLLVIDRGNQAI 211 (495)
Q Consensus 141 dGnIYVAD~~N~rIrk~d~~G-V~tiaGg~~------G~~~g~~dG-~~~~a~f~~P~gVa~vd~-~G~LyVaD~gN~rI 211 (495)
+|+|||||+.|||||+|+++| ++|++|... +..+|+.+| ++..++|+.|.+|+ ++. +|+|||+|.+|+||
T Consensus 390 ~g~lyVaD~~N~rIr~i~~~G~v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIa-vd~~~g~lyVaD~~N~rI 468 (496)
T 3kya_A 390 EYDFYFVDRLNFCVRKVTPEGIVSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLV-YDDVKEMFYVHDQVGHTI 468 (496)
T ss_dssp CEEEEEEEGGGTEEEEECTTCBEEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEE-EETTTTEEEEEETTTTEE
T ss_pred CCeEEEEECCCCEEEEEeCCCCEEEEecccccccccCccccccCCCCchhhhhcCCCcEEE-EECCCCEEEEEeCCCCEE
Confidence 899999999999999999999 899998532 122366677 78899999999999 566 49999999999999
Q ss_pred EEEECCCCceee
Q 011014 212 REIQLHDDDCSD 223 (495)
Q Consensus 212 ~~~d~~g~~~~~ 223 (495)
|+|+++++.|.-
T Consensus 469 rki~~~~~~~~~ 480 (496)
T 3kya_A 469 RTISMEQEENVA 480 (496)
T ss_dssp EEEEECCCC---
T ss_pred EEEECCCCcccc
Confidence 999999988753
No 2
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=99.78 E-value=7.5e-18 Score=177.46 Aligned_cols=167 Identities=14% Similarity=0.098 Sum_probs=124.9
Q ss_pred CCCceEEEEcC-CCcEEEEECCCCeeEEEEcCCCCc--cccccCCCcCccccCCcceEEEcCCCC-EEEEECCCCEEEEE
Q 011014 82 GMEPFSVAVSP-SGELLVLDSENNSRPKLVAGSPEG--YYGHVDGRPRGARMNHPKGLAVDDRGN-IYIADTMNMAIRKI 157 (495)
Q Consensus 82 ~~~P~GIAVd~-dG~LyVaDs~n~~ii~ivaGs~~g--~~G~~dG~~~~a~f~~P~GIAVD~dGn-IYVAD~~N~rIrk~ 157 (495)
+..|.+|++|+ +|+|||+|..++++.++-..+... .... .+ ....+.+||+|++|+ |||+|..+++|+++
T Consensus 227 ~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~-~~-----~~~~~~~ia~dpdG~~LYvad~~~~~I~~~ 300 (433)
T 4hw6_A 227 ARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVM-MD-----TKGSNFHIVWHPTGDWAYIIYNGKHCIYRV 300 (433)
T ss_dssp CSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEE-CS-----CCSSCEEEEECTTSSEEEEEETTTTEEEEE
T ss_pred cCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEec-cC-----CCCCcccEEEeCCCCEEEEEeCCCCEEEEE
Confidence 46899999999 899999999998555443221211 1111 11 123456899999998 99999999999998
Q ss_pred cCC---C----cEEEecCcccCCCCCCCCCCcCcccCCCceEEEE--------CCCCeEEEEECCCCeEEEEECCCCcee
Q 011014 158 SDT---G----VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYV--------GSSCSLLVIDRGNQAIREIQLHDDDCS 222 (495)
Q Consensus 158 d~~---G----V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~v--------d~~G~LyVaD~gN~rI~~~d~~g~~~~ 222 (495)
+.+ + +.+++|.. +. .|+.+|+...++|+.|.+|+++ +.+|+|||+|++|++|++|+++|....
T Consensus 301 ~~d~~~~~~~~~~~~ag~~-g~-~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~~G~v~t 378 (433)
T 4hw6_A 301 DYNRETGKLAVPYIVCGQH-SS-PGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTPEGRVTT 378 (433)
T ss_dssp EBCTTTCCBCCCEEEEECT-TC-CCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECTTSEEEE
T ss_pred eCCCCCcccCcEEEEEecC-CC-CccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECCCCCEEE
Confidence 854 3 35777642 21 4566788888999999999943 899999999999999999999884433
Q ss_pred eCCC------------------CCCcceEEEE-ecCcCeEEEEEccCCceEEEee
Q 011014 223 DNYD------------------DTFHLGIFVL-VAAAFFGYMLALLQRRVQAMFS 258 (495)
Q Consensus 223 ~~~~------------------~g~P~GIAvd-~~a~~~~yv~d~~~~Rv~~~~~ 258 (495)
..+. ...|.|||++ . .+.+||+|..|+||+++..
T Consensus 379 ~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~--~g~lyVaD~~n~rIr~i~~ 431 (433)
T 4hw6_A 379 YAGRGNSREWGYVDGELRSQALFNHPTSIAYDMK--RKCFYIGDCDNHRVRKIAP 431 (433)
T ss_dssp EECCCTTCSSCCBCEETTTTCBCSSEEEEEEETT--TTEEEEEEGGGTEEEEEEE
T ss_pred EEeCCCCCccccCCCccccccEeCCCcEEEEECC--CCEEEEEeCCCCEEEEEec
Confidence 2110 1249999999 5 6789999999999988754
No 3
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=99.78 E-value=2.5e-18 Score=181.12 Aligned_cols=134 Identities=25% Similarity=0.356 Sum_probs=107.8
Q ss_pred CceEEEEcCCCc-EEEEECCCCeeEEEE-cCC-C-----------CccccccCCCcCccccCCcceEEE---------cC
Q 011014 84 EPFSVAVSPSGE-LLVLDSENNSRPKLV-AGS-P-----------EGYYGHVDGRPRGARMNHPKGLAV---------DD 140 (495)
Q Consensus 84 ~P~GIAVd~dG~-LyVaDs~n~~ii~iv-aGs-~-----------~g~~G~~dG~~~~a~f~~P~GIAV---------D~ 140 (495)
.+.+|+++++|+ |||+|..++++.++- .+. . .+..|..+|....++|+.|.|||+ |.
T Consensus 274 ~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~ 353 (433)
T 4hw6_A 274 SNFHIVWHPTGDWAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEED 353 (433)
T ss_dssp SCEEEEECTTSSEEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSC
T ss_pred CcccEEEeCCCCEEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCC
Confidence 567899999998 999999999665543 111 0 133445566666789999999999 99
Q ss_pred CCCEEEEECCCCEEEEEcCCC-cEEEecCcccCCCCCCCC-CCcCcccCCCceEEEECCCCeEEEEECCCCeEEEEECC
Q 011014 141 RGNIYIADTMNMAIRKISDTG-VTTIAGGKWSRGVGHVDG-PSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLH 217 (495)
Q Consensus 141 dGnIYVAD~~N~rIrk~d~~G-V~tiaGg~~G~~~g~~dG-~~~~a~f~~P~gVa~vd~~G~LyVaD~gN~rI~~~d~~ 217 (495)
+|+|||||+.|+||++|+++| +++++|.......|+.+| ....++|+.|.+|++...+|+|||+|.+|+||++|+++
T Consensus 354 ~g~lyvaD~~n~~I~~~~~~G~v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 354 EYDFYFCDRDSHTVRVLTPEGRVTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp CEEEEEEETTTTEEEEECTTSEEEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred CCcEEEEECCCCEEEEECCCCCEEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence 999999999999999999999 888988543222456677 77788999999999533899999999999999999975
No 4
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=99.78 E-value=3.5e-18 Score=183.51 Aligned_cols=177 Identities=14% Similarity=0.073 Sum_probs=127.8
Q ss_pred CCceEEEEcC-CCcEEEEECCCCeeEEEEcC-------CCCc-ccc--ccCC---C-cCccccCCcceEEEcCCCC-EEE
Q 011014 83 MEPFSVAVSP-SGELLVLDSENNSRPKLVAG-------SPEG-YYG--HVDG---R-PRGARMNHPKGLAVDDRGN-IYI 146 (495)
Q Consensus 83 ~~P~GIAVd~-dG~LyVaDs~n~~ii~ivaG-------s~~g-~~G--~~dG---~-~~~a~f~~P~GIAVD~dGn-IYV 146 (495)
..|.+|++++ +|+|||+|..++.+.++-.. +... ... ...| . .....-..|.+||+|++|+ |||
T Consensus 247 ~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYv 326 (496)
T 3kya_A 247 KQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYF 326 (496)
T ss_dssp SCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEE
T ss_pred CCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEE
Confidence 5799999999 78999999999865555322 1110 000 0000 0 0001124688999999999 899
Q ss_pred EECCCCEEEEEcCCC-c------EEEecCcccCCCCCCCCCCcCcccCCCc-eEEEEC-------CCCeEEEEECCCCeE
Q 011014 147 ADTMNMAIRKISDTG-V------TTIAGGKWSRGVGHVDGPSEDAKFSNDF-DVVYVG-------SSCSLLVIDRGNQAI 211 (495)
Q Consensus 147 AD~~N~rIrk~d~~G-V------~tiaGg~~G~~~g~~dG~~~~a~f~~P~-gVa~vd-------~~G~LyVaD~gN~rI 211 (495)
||+.+|+|++++.++ . ++++|.... .|+.||++..++|+.|. +++ ++ .+|+|||+|++||||
T Consensus 327 aD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~--~G~~DG~~~~a~f~~P~~gv~-vd~~~~~~~~~g~lyVaD~~N~rI 403 (496)
T 3kya_A 327 GVINNHYFMRSDYDEIKKEFITPYNFVGGYKQ--SGYRDDVGTEARMNNPCQGVF-VKNPDYTGEEEYDFYFVDRLNFCV 403 (496)
T ss_dssp EETTTTEEEEEEEETTTTEECCCEEEEEBTTB--CCCBCCBGGGCBCSSEEEEEE-EECTTCCSSCCEEEEEEEGGGTEE
T ss_pred EeCCCCEEEEEecCCCcceecccEEecCCCCC--CcccCCcccccccCCCeEEEE-EccccccccCCCeEEEEECCCCEE
Confidence 999999999988665 1 577774222 45668999999999999 666 65 689999999999999
Q ss_pred EEEECCCCceeeCC-------------C-----------CCCcceEEEEecCcCeEEEEEccCCceEEEeeCCCCC
Q 011014 212 REIQLHDDDCSDNY-------------D-----------DTFHLGIFVLVAAAFFGYMLALLQRRVQAMFSSKDDP 263 (495)
Q Consensus 212 ~~~d~~g~~~~~~~-------------~-----------~g~P~GIAvd~~a~~~~yv~d~~~~Rv~~~~~s~~~~ 263 (495)
|+|+++|......+ + ...|.|||+|.. .+.|||+|..||||+++....+.+
T Consensus 404 r~i~~~G~v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~-~g~lyVaD~~N~rIrki~~~~~~~ 478 (496)
T 3kya_A 404 RKVTPEGIVSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDV-KEMFYVHDQVGHTIRTISMEQEEN 478 (496)
T ss_dssp EEECTTCBEEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETT-TTEEEEEETTTTEEEEEEECCCC-
T ss_pred EEEeCCCCEEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECC-CCEEEEEeCCCCEEEEEECCCCcc
Confidence 99999884432110 0 123999999962 278999999999999988877754
No 5
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.76 E-value=1.6e-16 Score=158.61 Aligned_cols=214 Identities=18% Similarity=0.202 Sum_probs=139.2
Q ss_pred ceeeeeeeeccceEEEEeCCCCce------------------ecCCceeEecC--CceEEEeecCCCCCCCceEEEEcCC
Q 011014 34 GIVSNVVSALVKWLWSLKDSPKTA------------------VSSSSMIKFEG--GYTVETVFEGSKFGMEPFSVAVSPS 93 (495)
Q Consensus 34 ~~~~~ia~a~~~~I~~~d~~t~~~------------------vaG~~i~~~~~--G~~~~~~~~G~~~~~~P~GIAVd~d 93 (495)
+.+..++.+..+.+|..+...... ...+.+..+.. |..... .+...+..|.+|+++++
T Consensus 24 ~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~--~~~~~~~~p~gia~d~~ 101 (329)
T 3fvz_A 24 GQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQS--SGKNLFYLPHGLSIDTD 101 (329)
T ss_dssp SCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEE--ECTTTCSSEEEEEECTT
T ss_pred CCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEec--cCCCccCCceEEEECCC
Confidence 445566666667777766554210 00112333332 332222 23344568999999999
Q ss_pred CcEEEEECCCCeeEEEEc-CC--CCcccccc--CCCcCccccCCcceEEEcC-CCCEEEEEC-CCCEEEEEcCCC--cEE
Q 011014 94 GELLVLDSENNSRPKLVA-GS--PEGYYGHV--DGRPRGARMNHPKGLAVDD-RGNIYIADT-MNMAIRKISDTG--VTT 164 (495)
Q Consensus 94 G~LyVaDs~n~~ii~iva-Gs--~~g~~G~~--dG~~~~a~f~~P~GIAVD~-dGnIYVAD~-~N~rIrk~d~~G--V~t 164 (495)
|+|||+|..++++.++-. |. .....+.. .| .....|..|.+||+|+ +|+|||||+ .+++|++|+.+| +.+
T Consensus 102 g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g-~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~~g~~~~~ 180 (329)
T 3fvz_A 102 GNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPG-SDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSPSGKFVTQ 180 (329)
T ss_dssp SCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCC-CSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECTTSCEEEE
T ss_pred CCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCC-CCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcCCCCEEEE
Confidence 999999999985444322 22 11112210 11 1135789999999999 899999997 799999999988 333
Q ss_pred EecCcccCCCCCCCCCCcCcccCCCceEEEECCC-CeEEEEECCCCeEEEEECC-CCceeeC------------------
Q 011014 165 IAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSS-CSLLVIDRGNQAIREIQLH-DDDCSDN------------------ 224 (495)
Q Consensus 165 iaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~-G~LyVaD~gN~rI~~~d~~-g~~~~~~------------------ 224 (495)
+ +. .+. ......+.|..|.+|+ ++++ |+|||+|.++++|++|+++ |......
T Consensus 181 ~-~~-~g~-----~~~~~~~~~~~p~gia-~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~pg~ 252 (329)
T 3fvz_A 181 W-GE-ESS-----GSSPRPGQFSVPHSLA-LVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIPGF 252 (329)
T ss_dssp E-CE-ECC-----SSSCCTTEESCEEEEE-EETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEETTE
T ss_pred e-cc-CCC-----CCCCCCcccCCCcEEE-EECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecCCE
Confidence 3 21 111 0112346789999999 5665 9999999999999999998 4332110
Q ss_pred ------------------------------------CCCCCcceEEEEecCcCeEEEEEccCCceEEEeeCC
Q 011014 225 ------------------------------------YDDTFHLGIFVLVAAAFFGYMLALLQRRVQAMFSSK 260 (495)
Q Consensus 225 ------------------------------------~~~g~P~GIAvd~~a~~~~yv~d~~~~Rv~~~~~s~ 260 (495)
.....|.+|+++. .+.+||++..++||+++..+.
T Consensus 253 ~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~--dG~lyvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 253 LFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASE--DGTVYIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp EEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECT--TSEEEEEESSSCCEEEEEEEE
T ss_pred EEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECC--CCCEEEEECCCCEEEEEeCCc
Confidence 1122488999986 458999999999997665543
No 6
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=99.76 E-value=2e-17 Score=173.87 Aligned_cols=168 Identities=15% Similarity=0.060 Sum_probs=125.2
Q ss_pred CCCceEEEEcC-CCcEEEEECCCCeeEEEEcCCCCc-cccccCCCcCccccCCcceEEEcCCCC-EEEEECCCCEEEEEc
Q 011014 82 GMEPFSVAVSP-SGELLVLDSENNSRPKLVAGSPEG-YYGHVDGRPRGARMNHPKGLAVDDRGN-IYIADTMNMAIRKIS 158 (495)
Q Consensus 82 ~~~P~GIAVd~-dG~LyVaDs~n~~ii~ivaGs~~g-~~G~~dG~~~~a~f~~P~GIAVD~dGn-IYVAD~~N~rIrk~d 158 (495)
+..|.+|++++ +|+|||+|..++++.++-...... .... ......|.|||+|++|+ |||+|..+++|++|+
T Consensus 225 ~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~------~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~ 298 (430)
T 3tc9_A 225 GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFT------IQDSGWEFHIQFHPSGNYAYIVVVNQHYILRSD 298 (430)
T ss_dssp CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEE------CSSSSCCEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEE------cCCCCcceeEEEcCCCCEEEEEECCCCEEEEEe
Confidence 46899999999 899999999999655554322111 1111 01225799999999999 999999999999999
Q ss_pred CCC-------cEEEecCcccCCCCCCCCCCcCcccCCCc-eEEEE-------CCCCeEEEEECCCCeEEEEECCCCceee
Q 011014 159 DTG-------VTTIAGGKWSRGVGHVDGPSEDAKFSNDF-DVVYV-------GSSCSLLVIDRGNQAIREIQLHDDDCSD 223 (495)
Q Consensus 159 ~~G-------V~tiaGg~~G~~~g~~dG~~~~a~f~~P~-gVa~v-------d~~G~LyVaD~gN~rI~~~d~~g~~~~~ 223 (495)
.++ +.+++|.. +. .|+.+|....++|+.|. ++++. |.+|+|||+|++|++|++|+++|.....
T Consensus 299 ~d~~~~~~~~~~~~ag~~-g~-~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~i~~~G~v~~~ 376 (430)
T 3tc9_A 299 YDWKTKRLTTPYIVCGQQ-GA-KDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRILTPQGRVTTF 376 (430)
T ss_dssp EETTTTEECCCEEEEECT-TC-BCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEEEECTTSEEEEE
T ss_pred CCcccccccceEEEeccC-CC-CCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCCcEEEEECCCCcEEEE
Confidence 664 45677642 11 34557777788999999 77733 5679999999999999999998854332
Q ss_pred CC-------C-----------CCCcceEEEEecCcCeEEEEEccCCceEEEee
Q 011014 224 NY-------D-----------DTFHLGIFVLVAAAFFGYMLALLQRRVQAMFS 258 (495)
Q Consensus 224 ~~-------~-----------~g~P~GIAvd~~a~~~~yv~d~~~~Rv~~~~~ 258 (495)
.+ + ...|.|||++. ..+++||+|..|+||+++..
T Consensus 377 ~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~-~~g~lyVaD~~n~rIr~i~~ 428 (430)
T 3tc9_A 377 AGRGSNGTSGYNDGDLRQEARFNHPEGIVYDE-ERECFFIGDRENRRIRKIGY 428 (430)
T ss_dssp EECCTTSSSSCBCEETTTTCBCSSEEEEEEET-TTTEEEEEEGGGTEEEEEEE
T ss_pred EeCCCCCCCcccCCCchhhcEeCCCcEEEEEC-CCCEEEEEECCCCeEEEEcc
Confidence 11 1 12599999995 24689999999999988754
No 7
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=99.73 E-value=5.1e-17 Score=170.70 Aligned_cols=133 Identities=29% Similarity=0.420 Sum_probs=105.5
Q ss_pred CCceEEEEcCCCc-EEEEECCCCeeEEEE-cCCC------------CccccccCCCcCccccCCcc-eEEE--------c
Q 011014 83 MEPFSVAVSPSGE-LLVLDSENNSRPKLV-AGSP------------EGYYGHVDGRPRGARMNHPK-GLAV--------D 139 (495)
Q Consensus 83 ~~P~GIAVd~dG~-LyVaDs~n~~ii~iv-aGs~------------~g~~G~~dG~~~~a~f~~P~-GIAV--------D 139 (495)
..|.+|+++++|+ |||+|..++++.++- .+.. .+..|..+|....++|+.|. |+++ |
T Consensus 270 ~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D 349 (430)
T 3tc9_A 270 GWEFHIQFHPSGNYAYIVVVNQHYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSS 349 (430)
T ss_dssp SCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSS
T ss_pred CcceeEEEcCCCCEEEEEECCCCEEEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccC
Confidence 4799999999999 999999999555542 2220 12334445555678999999 9999 4
Q ss_pred CCCCEEEEECCCCEEEEEcCCC-cEEEecCcc-cCCCCCCCC-CCcCcccCCCceEEEECC-CCeEEEEECCCCeEEEEE
Q 011014 140 DRGNIYIADTMNMAIRKISDTG-VTTIAGGKW-SRGVGHVDG-PSEDAKFSNDFDVVYVGS-SCSLLVIDRGNQAIREIQ 215 (495)
Q Consensus 140 ~dGnIYVAD~~N~rIrk~d~~G-V~tiaGg~~-G~~~g~~dG-~~~~a~f~~P~gVa~vd~-~G~LyVaD~gN~rI~~~d 215 (495)
++|+|||||++|+||++|+++| +.+++|... +. .|+.+| +...++|+.|.+|++ ++ +|.|||+|.+|+||++|+
T Consensus 350 ~~g~lyvaD~~n~~I~~i~~~G~v~~~~g~g~~~~-~G~~dG~~~~~~~~~~P~giav-d~~~g~lyVaD~~n~rIr~i~ 427 (430)
T 3tc9_A 350 DEYDFYFCDRENHCIRILTPQGRVTTFAGRGSNGT-SGYNDGDLRQEARFNHPEGIVY-DEERECFFIGDRENRRIRKIG 427 (430)
T ss_dssp CCEEEEEEEGGGTEEEEECTTSEEEEEEECCTTSS-SSCBCEETTTTCBCSSEEEEEE-ETTTTEEEEEEGGGTEEEEEE
T ss_pred CCCeEEEEECCCcEEEEECCCCcEEEEEeCCCCCC-CcccCCCchhhcEeCCCcEEEE-ECCCCEEEEEECCCCeEEEEc
Confidence 6799999999999999999999 888887422 22 355566 678889999999994 65 799999999999999999
Q ss_pred CC
Q 011014 216 LH 217 (495)
Q Consensus 216 ~~ 217 (495)
++
T Consensus 428 ~e 429 (430)
T 3tc9_A 428 YE 429 (430)
T ss_dssp EC
T ss_pred cC
Confidence 76
No 8
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.72 E-value=1.4e-16 Score=165.91 Aligned_cols=167 Identities=17% Similarity=0.167 Sum_probs=122.6
Q ss_pred CCCCceEEEEcC-CCcEEEEECCCCeeEEEEcCCCCc-cccc--cCCCcCccccCCcc-eEEEcC-CCCEEEEECCCCEE
Q 011014 81 FGMEPFSVAVSP-SGELLVLDSENNSRPKLVAGSPEG-YYGH--VDGRPRGARMNHPK-GLAVDD-RGNIYIADTMNMAI 154 (495)
Q Consensus 81 ~~~~P~GIAVd~-dG~LyVaDs~n~~ii~ivaGs~~g-~~G~--~dG~~~~a~f~~P~-GIAVD~-dGnIYVAD~~N~rI 154 (495)
.+..|.+|++++ +|+|||+|. ++.+.++-..+... .... ..+ ..-..|. +|++|+ +|+|||+|..+++|
T Consensus 217 ~~~~p~~iav~p~~g~lyv~d~-~~~I~~~d~~~~~~~~~~~~~~~g----~~~~~P~~~ia~~p~~g~lyv~d~~~~~I 291 (409)
T 3hrp_A 217 FSGKIGAVALDETEEWLYFVDS-NKNFGRFNVKTQEVTLIKQLELSG----SLGTNPGPYLIYYFVDSNFYMSDQNLSSV 291 (409)
T ss_dssp SCSCCCBCEECTTSSEEEEECT-TCEEEEEETTTCCEEEEEECCCCS----CCCCSSCCEEEEETTTTEEEEEETTTTEE
T ss_pred hcCCcEEEEEeCCCCeEEEEEC-CCcEEEEECCCCCEEEEecccccC----CCCCCccccEEEeCCCCEEEEEeCCCCEE
Confidence 346899999999 899999886 44344443222111 1100 011 1123477 999999 68999999999999
Q ss_pred EEEcCCC-cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEEC-CCCeEEEEECCCCceee-CCC-----
Q 011014 155 RKISDTG-VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDR-GNQAIREIQLHDDDCSD-NYD----- 226 (495)
Q Consensus 155 rk~d~~G-V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~-gN~rI~~~d~~g~~~~~-~~~----- 226 (495)
++++.+| +.+++|.... .|+.+|....++|+.|.+|+ ++++|+|||+|. +|++|++|++....+.+ .+.
T Consensus 292 ~~~~~~g~~~~~~g~~~~--~g~~dg~~~~~~~~~P~gia-~d~dG~lyvad~~~~~~I~~~~~~~G~v~~~~g~~~~~g 368 (409)
T 3hrp_A 292 YKITPDGECEWFCGSATQ--KTVQDGLREEALFAQPNGMT-VDEDGNFYIVDGFKGYCLRKLDILDGYVSTVAGQVDVAS 368 (409)
T ss_dssp EEECTTCCEEEEEECTTC--CSCBCEEGGGCBCSSEEEEE-ECTTCCEEEEETTTTCEEEEEETTTTEEEEEEECTTCBS
T ss_pred EEEecCCCEEEEEeCCCC--CCcCCCcccccEeCCCeEEE-EeCCCCEEEEeCCCCCEEEEEECCCCEEEEEeCCCCCCC
Confidence 9999888 7777764311 45667777788999999999 789999999999 99999999944333332 111
Q ss_pred ----------CCCcceEEEEecCcCeEEEEEccCCceEEEe
Q 011014 227 ----------DTFHLGIFVLVAAAFFGYMLALLQRRVQAMF 257 (495)
Q Consensus 227 ----------~g~P~GIAvd~~a~~~~yv~d~~~~Rv~~~~ 257 (495)
...|.|||++. .+.+||++..++||+++.
T Consensus 369 ~~~g~~~~~~~~~P~giavd~--~g~lyVad~~n~~Ir~i~ 407 (409)
T 3hrp_A 369 QIDGTPLEATFNYPYDICYDG--EGGYWIAEAWGKAIRKYA 407 (409)
T ss_dssp CCCBSTTTCCBSSEEEEEECS--SSEEEEEESTTCEEEEEE
T ss_pred cCCCChhceEeCCceEEEEcC--CCCEEEEECCCCeEEEEE
Confidence 23599999997 479999999999998864
No 9
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.71 E-value=2.7e-16 Score=163.72 Aligned_cols=132 Identities=25% Similarity=0.372 Sum_probs=105.3
Q ss_pred CCce-EEEEcC-CCcEEEEECCCCeeEEEEc-CCCC------ccccccCCCcCccccCCcceEEEcCCCCEEEEEC-CCC
Q 011014 83 MEPF-SVAVSP-SGELLVLDSENNSRPKLVA-GSPE------GYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADT-MNM 152 (495)
Q Consensus 83 ~~P~-GIAVd~-dG~LyVaDs~n~~ii~iva-Gs~~------g~~G~~dG~~~~a~f~~P~GIAVD~dGnIYVAD~-~N~ 152 (495)
..|. +|++++ +|+|||+|..++++.++-. |... +..|..+|....++|+.|.|||+|++|+|||||+ .|+
T Consensus 266 ~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~ 345 (409)
T 3hrp_A 266 TNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGECEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGY 345 (409)
T ss_dssp CSSCCEEEEETTTTEEEEEETTTTEEEEECTTCCEEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTC
T ss_pred CCccccEEEeCCCCEEEEEeCCCCEEEEEecCCCEEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCC
Confidence 4577 999999 6999999999995544321 2110 1234445555567899999999999999999999 999
Q ss_pred EEEEEc-CCC-cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECCCCeEEEEECC
Q 011014 153 AIRKIS-DTG-VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLH 217 (495)
Q Consensus 153 rIrk~d-~~G-V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~gN~rI~~~d~~ 217 (495)
+|++|+ .+| +.+++|.... .|+.+|....++|+.|.+|+ ++.+|+|||+|.+|++|++|+++
T Consensus 346 ~I~~~~~~~G~v~~~~g~~~~--~g~~~g~~~~~~~~~P~gia-vd~~g~lyVad~~n~~Ir~i~~e 409 (409)
T 3hrp_A 346 CLRKLDILDGYVSTVAGQVDV--ASQIDGTPLEATFNYPYDIC-YDGEGGYWIAEAWGKAIRKYAVE 409 (409)
T ss_dssp EEEEEETTTTEEEEEEECTTC--BSCCCBSTTTCCBSSEEEEE-ECSSSEEEEEESTTCEEEEEEEC
T ss_pred EEEEEECCCCEEEEEeCCCCC--CCcCCCChhceEeCCceEEE-EcCCCCEEEEECCCCeEEEEEeC
Confidence 999999 888 7888874322 45667777888999999999 68889999999999999999864
No 10
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.70 E-value=6.2e-16 Score=154.29 Aligned_cols=165 Identities=15% Similarity=0.168 Sum_probs=119.7
Q ss_pred CCCCceEEEEcCCCcEEEEECCCCe-----------------------eEEEEcCCCCccccccCCCcCccccCCcceEE
Q 011014 81 FGMEPFSVAVSPSGELLVLDSENNS-----------------------RPKLVAGSPEGYYGHVDGRPRGARMNHPKGLA 137 (495)
Q Consensus 81 ~~~~P~GIAVd~dG~LyVaDs~n~~-----------------------ii~ivaGs~~g~~G~~dG~~~~a~f~~P~GIA 137 (495)
.+..|.+||+|++|+|||+|..+++ .+.++.... +..-... ....|..|.|||
T Consensus 22 ~l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~-g~~~~~~---~~~~~~~p~gia 97 (329)
T 3fvz_A 22 LPGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNN-AEILQSS---GKNLFYLPHGLS 97 (329)
T ss_dssp CCSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTT-CCEEEEE---CTTTCSSEEEEE
T ss_pred ecCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCC-CeEEecc---CCCccCCceEEE
Confidence 4568999999999999999998852 233433210 1110001 124688999999
Q ss_pred EcCCCCEEEEECCCCEEEEEcCCC----cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECC-CCeEEEEEC-CCCeE
Q 011014 138 VDDRGNIYIADTMNMAIRKISDTG----VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGS-SCSLLVIDR-GNQAI 211 (495)
Q Consensus 138 VD~dGnIYVAD~~N~rIrk~d~~G----V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~-~G~LyVaD~-gN~rI 211 (495)
+|++|+|||+|..+++|++++.+| +.++ +.. +. .| .....|..|.+|+ +++ +|+|||+|. .+++|
T Consensus 98 ~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~-~~~-~~-~g-----~~~~~~~~P~~ia-~~~~~g~lyv~d~~~~~~I 168 (329)
T 3fvz_A 98 IDTDGNYWVTDVALHQVFKLDPHSKEGPLLIL-GRS-MQ-PG-----SDQNHFCQPTDVA-VEPSTGAVFVSDGYCNSRI 168 (329)
T ss_dssp ECTTSCEEEEETTTTEEEEECTTCSSCCSEEE-SBT-TB-CC-----CSTTCCSSEEEEE-ECTTTCCEEEEECSSCCEE
T ss_pred ECCCCCEEEEECCCCEEEEEeCCCCeEEEEEe-ccc-CC-CC-----CCccccCCCcEEE-EeCCCCeEEEEeCCCCCeE
Confidence 999999999999999999999887 3444 211 11 11 1235788999999 576 899999996 89999
Q ss_pred EEEECCCCceeeCC-----------CCCCcceEEEEecCcCeEEEEEccCCceEEEeeC
Q 011014 212 REIQLHDDDCSDNY-----------DDTFHLGIFVLVAAAFFGYMLALLQRRVQAMFSS 259 (495)
Q Consensus 212 ~~~d~~g~~~~~~~-----------~~g~P~GIAvd~~a~~~~yv~d~~~~Rv~~~~~s 259 (495)
++|+.+|..+.... ....|.||+++.. ++.+||++..++||+.+-..
T Consensus 169 ~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~-~g~l~v~d~~~~~I~~~~~~ 226 (329)
T 3fvz_A 169 VQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPH-LDQLCVADRENGRIQCFKTD 226 (329)
T ss_dssp EEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETT-TTEEEEEETTTTEEEEEETT
T ss_pred EEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECC-CCEEEEEECCCCEEEEEECC
Confidence 99999998765422 1124999999962 37899999999999654443
No 11
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=99.64 E-value=5.5e-14 Score=143.31 Aligned_cols=149 Identities=17% Similarity=0.116 Sum_probs=115.3
Q ss_pred CCceEEEEcC-CCcEEEEECCCCeeEEEEc-CCCCccccccCCCcCccccCCcceEEEcC-CCCEEEEECCC-CEEEEEc
Q 011014 83 MEPFSVAVSP-SGELLVLDSENNSRPKLVA-GSPEGYYGHVDGRPRGARMNHPKGLAVDD-RGNIYIADTMN-MAIRKIS 158 (495)
Q Consensus 83 ~~P~GIAVd~-dG~LyVaDs~n~~ii~iva-Gs~~g~~G~~dG~~~~a~f~~P~GIAVD~-dGnIYVAD~~N-~rIrk~d 158 (495)
..|.|||+|. +|+||++|..++++..+-. |..... .....+..|.|||+|+ +|.||++|..+ ++|.+++
T Consensus 116 ~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~-------l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~ 188 (349)
T 3v64_C 116 ESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKV-------LLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASS 188 (349)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE-------EECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEE
T ss_pred CCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEE-------EEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEe
Confidence 5799999996 7899999999884444322 221111 1123578999999997 78899999998 9999999
Q ss_pred CCC--cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCceee--CCCCCCcceEE
Q 011014 159 DTG--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCSD--NYDDTFHLGIF 234 (495)
Q Consensus 159 ~~G--V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~gN~rI~~~d~~g~~~~~--~~~~g~P~GIA 234 (495)
.+| ..++.. ..+..|++|++...++.||++|..+++|.+++++|..... ....+.|.||+
T Consensus 189 ~dG~~~~~~~~----------------~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~gia 252 (349)
T 3v64_C 189 MDGSGRRIIAD----------------THLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAIT 252 (349)
T ss_dssp TTSCSCEESCC----------------SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEE
T ss_pred CCCCCcEEEEE----------------CCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEeCCCCCceEEE
Confidence 888 333311 1367899999544789999999999999999999966432 34466899999
Q ss_pred EEecCcCeEEEEEccCCceEEEe
Q 011014 235 VLVAAAFFGYMLALLQRRVQAMF 257 (495)
Q Consensus 235 vd~~a~~~~yv~d~~~~Rv~~~~ 257 (495)
++ ...+|++++.+++|.++.
T Consensus 253 v~---~~~ly~td~~~~~V~~~~ 272 (349)
T 3v64_C 253 VF---EDSLYWTDWHTKSINSAN 272 (349)
T ss_dssp EE---TTEEEEEETTTTEEEEEE
T ss_pred EE---CCEEEEecCCCCeEEEEE
Confidence 96 578999999999997665
No 12
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=99.62 E-value=7.1e-14 Score=144.36 Aligned_cols=148 Identities=17% Similarity=0.137 Sum_probs=115.0
Q ss_pred CCceEEEEcC-CCcEEEEECCCCeeEEEEc--CCCCccccccCCCcCccccCCcceEEEcC-CCCEEEEECCC-CEEEEE
Q 011014 83 MEPFSVAVSP-SGELLVLDSENNSRPKLVA--GSPEGYYGHVDGRPRGARMNHPKGLAVDD-RGNIYIADTMN-MAIRKI 157 (495)
Q Consensus 83 ~~P~GIAVd~-dG~LyVaDs~n~~ii~iva--Gs~~g~~G~~dG~~~~a~f~~P~GIAVD~-dGnIYVAD~~N-~rIrk~ 157 (495)
..|.|||+|+ +|+||++|..+++ +.++. |..... .....|..|.|||+|+ .|.||++|..+ ++|.++
T Consensus 159 ~~p~glavd~~~g~lY~~d~~~~~-I~~~~~dg~~~~~-------l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~ 230 (386)
T 3v65_B 159 ESPGGLAVDWVHDKLYWTDSGTSR-IEVANLDGAHRKV-------LLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEAS 230 (386)
T ss_dssp SCCCCEEEETTTTEEEEEETTTTE-EEECBTTSCSCEE-------EECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEE
T ss_pred CCccEEEEEeCCCeEEEEcCCCCe-EEEEeCCCCceEE-------eecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEE
Confidence 5799999996 7899999999884 44432 221111 1123578999999996 77899999998 999999
Q ss_pred cCCC--cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCceee--CCCCCCcceE
Q 011014 158 SDTG--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCSD--NYDDTFHLGI 233 (495)
Q Consensus 158 d~~G--V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~gN~rI~~~d~~g~~~~~--~~~~g~P~GI 233 (495)
+.+| ..++.. ..+..|++|++...++.|||+|..+++|++++++|..... ....+.|.||
T Consensus 231 ~~dG~~~~~~~~----------------~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~gi 294 (386)
T 3v65_B 231 SMDGSGRRIIAD----------------THLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAI 294 (386)
T ss_dssp ETTSCSCEEEEC----------------SSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECSSCSSEEEE
T ss_pred eCCCCCcEEEEE----------------CCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEECCCCCceEE
Confidence 9888 444422 1366899999644789999999999999999999866432 3446689999
Q ss_pred EEEecCcCeEEEEEccCCceEEEe
Q 011014 234 FVLVAAAFFGYMLALLQRRVQAMF 257 (495)
Q Consensus 234 Avd~~a~~~~yv~d~~~~Rv~~~~ 257 (495)
+++ ...+|++++.+++|.++.
T Consensus 295 av~---~~~ly~td~~~~~V~~~~ 315 (386)
T 3v65_B 295 TVF---EDSLYWTDWHTKSINSAN 315 (386)
T ss_dssp EEE---TTEEEEEETTTTEEEEEE
T ss_pred EEE---CCEEEEeeCCCCeEEEEE
Confidence 996 568999999999997665
No 13
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=99.62 E-value=1e-13 Score=140.11 Aligned_cols=150 Identities=16% Similarity=0.093 Sum_probs=115.0
Q ss_pred CCceEEEEcC-CCcEEEEECCCCeeEEEEc-CCCCccccccCCCcCccccCCcceEEEcC-CCCEEEEECC-CCEEEEEc
Q 011014 83 MEPFSVAVSP-SGELLVLDSENNSRPKLVA-GSPEGYYGHVDGRPRGARMNHPKGLAVDD-RGNIYIADTM-NMAIRKIS 158 (495)
Q Consensus 83 ~~P~GIAVd~-dG~LyVaDs~n~~ii~iva-Gs~~g~~G~~dG~~~~a~f~~P~GIAVD~-dGnIYVAD~~-N~rIrk~d 158 (495)
..|.|||+|. +|+||++|..++++..+-. |...... ....+..|.|||+|+ .|.||++|.+ +++|.+++
T Consensus 79 ~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l-------~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~ 151 (318)
T 3sov_A 79 LSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVL-------FWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAG 151 (318)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE-------ECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEE
T ss_pred CCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEE-------EeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEE
Confidence 4799999996 8899999999884443322 2211111 124678999999997 6889999976 79999999
Q ss_pred CCC--cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCceee--CCCCCCcceEE
Q 011014 159 DTG--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCSD--NYDDTFHLGIF 234 (495)
Q Consensus 159 ~~G--V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~gN~rI~~~d~~g~~~~~--~~~~g~P~GIA 234 (495)
.+| ..++.. ..+..|++|++...++.||++|..+++|.+++++|..... ....+.|.||+
T Consensus 152 ~dG~~~~~~~~----------------~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~gla 215 (318)
T 3sov_A 152 MDGSSRFIIIN----------------SEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALT 215 (318)
T ss_dssp TTSCSCEEEEC----------------SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSCCSCEEEEE
T ss_pred cCCCCeEEEEE----------------CCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEecCCCCCceEEE
Confidence 988 444421 1367899999644689999999999999999999866543 33566899999
Q ss_pred EEecCcCeEEEEEccCCceEEEee
Q 011014 235 VLVAAAFFGYMLALLQRRVQAMFS 258 (495)
Q Consensus 235 vd~~a~~~~yv~d~~~~Rv~~~~~ 258 (495)
++ +..+|+++..+++|..+.-
T Consensus 216 v~---~~~lywtd~~~~~V~~~~~ 236 (318)
T 3sov_A 216 LF---EDILYWTDWSTHSILACNK 236 (318)
T ss_dssp EE---TTEEEEEETTTTEEEEEET
T ss_pred Ee---CCEEEEEecCCCeEEEEEC
Confidence 98 4689999999999965543
No 14
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=99.61 E-value=1.7e-13 Score=142.43 Aligned_cols=151 Identities=13% Similarity=0.071 Sum_probs=115.2
Q ss_pred CCCceEEEEcC-CCcEEEEECCCCeeEEEEcCCCCccccccCCCcCccccCCcceEEEcC-CCCEEEEECC-CCEEEEEc
Q 011014 82 GMEPFSVAVSP-SGELLVLDSENNSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDD-RGNIYIADTM-NMAIRKIS 158 (495)
Q Consensus 82 ~~~P~GIAVd~-dG~LyVaDs~n~~ii~ivaGs~~g~~G~~dG~~~~a~f~~P~GIAVD~-dGnIYVAD~~-N~rIrk~d 158 (495)
+..|.|||||. .++||++|..++++ .++.-.+..... .....|..|.|||+|+ .|.||++|.+ +++|.+++
T Consensus 158 ~~~p~glavD~~~~~lY~~d~~~~~I-~~~~~~g~~~~~-----l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~ 231 (400)
T 3p5b_L 158 IQAPDGLAVDWIHSNIYWTDSVLGTV-SVADTKGVKRKT-----LFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGG 231 (400)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEE-EEECTTTCSEEE-----EEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEE
T ss_pred CCCcccEEEEecCCceEEEECCCCeE-EEEeCCCCceEE-----EEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEe
Confidence 35899999997 89999999999844 444322111000 1123678999999997 7889999987 58999999
Q ss_pred CCC--cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCceeeC----CCCCCcce
Q 011014 159 DTG--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCSDN----YDDTFHLG 232 (495)
Q Consensus 159 ~~G--V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~gN~rI~~~d~~g~~~~~~----~~~g~P~G 232 (495)
.+| ..++.. ..+..|++|++...++.||++|..+++|++++++|...... .....|.|
T Consensus 232 ~dG~~~~~~~~----------------~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~g 295 (400)
T 3p5b_L 232 LNGVDIYSLVT----------------ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFS 295 (400)
T ss_dssp TTSCSCEEEEC----------------SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEE
T ss_pred CCCCccEEEEE----------------CCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEE
Confidence 988 444421 13679999996557899999999999999999999765431 23457999
Q ss_pred EEEEecCcCeEEEEEccCCceEEEe
Q 011014 233 IFVLVAAAFFGYMLALLQRRVQAMF 257 (495)
Q Consensus 233 IAvd~~a~~~~yv~d~~~~Rv~~~~ 257 (495)
|+++ +..+|++|+.+++|..+.
T Consensus 296 l~v~---~~~lywtd~~~~~V~~~~ 317 (400)
T 3p5b_L 296 LAVF---EDKVFWTDIINEAIFSAN 317 (400)
T ss_dssp EEEE---TTEEEEEESSSCSEEEEE
T ss_pred EEEe---CCEEEEecCCCCeEEEEE
Confidence 9997 568999999999996664
No 15
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=99.61 E-value=1.7e-13 Score=137.28 Aligned_cols=150 Identities=14% Similarity=0.080 Sum_probs=113.7
Q ss_pred CCCceEEEEcC-CCcEEEEECCCCeeEEEEc-CCCCccccccCCCcCccccCCcceEEEcC-CCCEEEEECCC-CEEEEE
Q 011014 82 GMEPFSVAVSP-SGELLVLDSENNSRPKLVA-GSPEGYYGHVDGRPRGARMNHPKGLAVDD-RGNIYIADTMN-MAIRKI 157 (495)
Q Consensus 82 ~~~P~GIAVd~-dG~LyVaDs~n~~ii~iva-Gs~~g~~G~~dG~~~~a~f~~P~GIAVD~-dGnIYVAD~~N-~rIrk~ 157 (495)
+..|.|||+|. +|+||++|..++++..+-. |...... ....+..|.|||+|+ .|.||++|.++ ++|.++
T Consensus 76 ~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~-------~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~ 148 (316)
T 1ijq_A 76 IQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTL-------FRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKG 148 (316)
T ss_dssp CSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEE-------EECTTCCEEEEEEETTTTEEEEEECSSSCEEEEE
T ss_pred CCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEE-------EECCCCCcceEEeCCCCCEEEEEccCCCCeEEEE
Confidence 35799999995 7899999999885443321 2211111 113578999999997 78899999986 899999
Q ss_pred cCCC-c-EEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCceeeC----CCCCCcc
Q 011014 158 SDTG-V-TTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCSDN----YDDTFHL 231 (495)
Q Consensus 158 d~~G-V-~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~gN~rI~~~d~~g~~~~~~----~~~g~P~ 231 (495)
+.+| . .++.. ..+..|++|++...++.||++|..+++|.+++++|...... ...+.|.
T Consensus 149 ~~dG~~~~~~~~----------------~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~~~~~~~~~~~~P~ 212 (316)
T 1ijq_A 149 GLNGVDIYSLVT----------------ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPF 212 (316)
T ss_dssp ETTSCCEEEEEC----------------SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEE
T ss_pred cCCCCCeEEEEE----------------CCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCceEEEeecCCccCCcE
Confidence 9888 3 33321 14678999996546889999999999999999999665431 2345799
Q ss_pred eEEEEecCcCeEEEEEccCCceEEEe
Q 011014 232 GIFVLVAAAFFGYMLALLQRRVQAMF 257 (495)
Q Consensus 232 GIAvd~~a~~~~yv~d~~~~Rv~~~~ 257 (495)
||+++ +..+|+++..+++|..+.
T Consensus 213 giav~---~~~ly~~d~~~~~V~~~~ 235 (316)
T 1ijq_A 213 SLAVF---EDKVFWTDIINEAIFSAN 235 (316)
T ss_dssp EEEEE---TTEEEEEETTTTEEEEEE
T ss_pred EEEEE---CCEEEEEECCCCeEEEEe
Confidence 99998 478999999999996554
No 16
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.59 E-value=1.5e-13 Score=130.43 Aligned_cols=149 Identities=22% Similarity=0.229 Sum_probs=113.3
Q ss_pred CCceEEEEcCCCcEEEEECCCCeeEEEEcCCCCccccccCCCcCccccCCcceEEEcCCCCEEEEECCCCEEEEEcCCCc
Q 011014 83 MEPFSVAVSPSGELLVLDSENNSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMNMAIRKISDTGV 162 (495)
Q Consensus 83 ~~P~GIAVd~dG~LyVaDs~n~~ii~ivaGs~~g~~G~~dG~~~~a~f~~P~GIAVD~dGnIYVAD~~N~rIrk~d~~GV 162 (495)
..|.+|+++++|+|||+|..++.+..+..++...... ....+..|.+|++|++|+|||+|..+++|.+++.++.
T Consensus 108 ~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~------~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~ 181 (270)
T 1rwi_B 108 NYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVL------PFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESN 181 (270)
T ss_dssp SSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEEC------CCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTC
T ss_pred CCCcceEECCCCCEEEEECCCCEEEEEECCCceeEee------ccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCC
Confidence 5799999999999999998877555553333211110 1234678999999999999999999999999998772
Q ss_pred EEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCceeeCCC--CCCcceEEEEecCc
Q 011014 163 TTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCSDNYD--DTFHLGIFVLVAAA 240 (495)
Q Consensus 163 ~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~gN~rI~~~d~~g~~~~~~~~--~g~P~GIAvd~~a~ 240 (495)
...... ...+..|.+|+ ++.+|+|||++..+++|.++++++........ ...|.+|+++. .
T Consensus 182 ~~~~~~--------------~~~~~~p~~i~-~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~--~ 244 (270)
T 1rwi_B 182 NQVVLP--------------FTDITAPWGIA-VDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDS--D 244 (270)
T ss_dssp CEEECC--------------CSSCCSEEEEE-ECTTCCEEEEETTTSCEEEECTTCSCCEECCCCSCSCEEEEEECT--T
T ss_pred ceEeec--------------ccCCCCceEEE-ECCCCCEEEEECCCCcEEEEcCCCCcceeeccCCCCCceeEEECC--C
Confidence 221110 11246899999 78899999999999999999999876654332 34699999996 4
Q ss_pred CeEEEEEccCCceE
Q 011014 241 FFGYMLALLQRRVQ 254 (495)
Q Consensus 241 ~~~yv~d~~~~Rv~ 254 (495)
+.+|+++..+++|.
T Consensus 245 g~l~v~~~~~~~v~ 258 (270)
T 1rwi_B 245 RTVYVADRGNDRVV 258 (270)
T ss_dssp CCEEEEEGGGTEEE
T ss_pred CCEEEEECCCCEEE
Confidence 57999999999994
No 17
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.58 E-value=4.9e-13 Score=128.94 Aligned_cols=150 Identities=17% Similarity=0.156 Sum_probs=111.5
Q ss_pred CCceEEEEcC-CCcEEEEECCCCeeEEEEc-CCCCccccccCCCcCccccCCcceEEEcC-CCCEEEEECC--CCEEEEE
Q 011014 83 MEPFSVAVSP-SGELLVLDSENNSRPKLVA-GSPEGYYGHVDGRPRGARMNHPKGLAVDD-RGNIYIADTM--NMAIRKI 157 (495)
Q Consensus 83 ~~P~GIAVd~-dG~LyVaDs~n~~ii~iva-Gs~~g~~G~~dG~~~~a~f~~P~GIAVD~-dGnIYVAD~~--N~rIrk~ 157 (495)
..|.+|++|+ .|+|||+|..++++..+-. |...... ....+..|.+|++|+ .|+|||+|.. +++|.++
T Consensus 79 ~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~-------~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~ 151 (267)
T 1npe_A 79 GSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVL-------FDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETS 151 (267)
T ss_dssp CCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE-------ECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEE
T ss_pred CCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEE-------EECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEE
Confidence 5899999998 5789999998885444322 2211111 112467899999998 6889999987 7899999
Q ss_pred cCCC--cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCceee-CCCCCCcceEE
Q 011014 158 SDTG--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCSD-NYDDTFHLGIF 234 (495)
Q Consensus 158 d~~G--V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~gN~rI~~~d~~g~~~~~-~~~~g~P~GIA 234 (495)
+.+| ..++.. ..+..|.+|++....+.|||+|..+++|.+|++++..... ......|.||+
T Consensus 152 ~~dg~~~~~~~~----------------~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~P~gi~ 215 (267)
T 1npe_A 152 HMDGTNRRILAQ----------------DNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEGLQYPFAVT 215 (267)
T ss_dssp ETTSCCCEEEEC----------------TTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEECCCSEEEEE
T ss_pred ecCCCCcEEEEE----------------CCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEecCCCCceEEE
Confidence 9887 333321 1356899999544468999999999999999999865432 23456799999
Q ss_pred EEecCcCeEEEEEccCCceEEEee
Q 011014 235 VLVAAAFFGYMLALLQRRVQAMFS 258 (495)
Q Consensus 235 vd~~a~~~~yv~d~~~~Rv~~~~~ 258 (495)
++ +..+||++..+++|..+-.
T Consensus 216 ~d---~~~lyva~~~~~~v~~~d~ 236 (267)
T 1npe_A 216 SY---GKNLYYTDWKTNSVIAMDL 236 (267)
T ss_dssp EE---TTEEEEEETTTTEEEEEET
T ss_pred Ee---CCEEEEEECCCCeEEEEeC
Confidence 98 4789999999999954433
No 18
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.58 E-value=2.7e-13 Score=130.61 Aligned_cols=150 Identities=15% Similarity=0.231 Sum_probs=113.2
Q ss_pred CCCceEEEE-cCCCcEEEEECC-CCeeEEEEcCCCCccccccCCCcCccccCCcceEEEcCCCCEEEEECCCCEEEEEcC
Q 011014 82 GMEPFSVAV-SPSGELLVLDSE-NNSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMNMAIRKISD 159 (495)
Q Consensus 82 ~~~P~GIAV-d~dG~LyVaDs~-n~~ii~ivaGs~~g~~G~~dG~~~~a~f~~P~GIAVD~dGnIYVAD~~N~rIrk~d~ 159 (495)
+..|.+|++ +++|+|||++.. ++ .+.++.....-.... ....+..|.+|++|++|+|||+|..+++|++++.
T Consensus 76 ~~~p~~i~~~~~~g~l~v~~~~~~~-~i~~~d~~g~~~~~~-----~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~ 149 (286)
T 1q7f_A 76 LLYPNRVAVVRNSGDIIVTERSPTH-QIQIYNQYGQFVRKF-----GATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQ 149 (286)
T ss_dssp BSSEEEEEEETTTTEEEEEECGGGC-EEEEECTTSCEEEEE-----CTTTCSCEEEEEECTTSCEEEEETTTTEEEEECT
T ss_pred ccCceEEEEEcCCCeEEEEcCCCCC-EEEEECCCCcEEEEe-----cCccCCCceEEEEeCCCCEEEEECCCCEEEEEcC
Confidence 357999999 589999999975 55 555554222111000 1124678999999999999999999999999998
Q ss_pred CC--cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCceeeCCCC---CCcceEE
Q 011014 160 TG--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCSDNYDD---TFHLGIF 234 (495)
Q Consensus 160 ~G--V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~gN~rI~~~d~~g~~~~~~~~~---g~P~GIA 234 (495)
+| +.++ +. ...+..|.+|+ ++.+|+|||+|..+++|+++++++..+...... ..|.+|+
T Consensus 150 ~g~~~~~~-~~--------------~~~~~~p~~i~-~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~g~~~~p~~i~ 213 (286)
T 1q7f_A 150 NGNVLHKF-GC--------------SKHLEFPNGVV-VNDKQEIFISDNRAHCVKVFNYEGQYLRQIGGEGITNYPIGVG 213 (286)
T ss_dssp TSCEEEEE-EC--------------TTTCSSEEEEE-ECSSSEEEEEEGGGTEEEEEETTCCEEEEESCTTTSCSEEEEE
T ss_pred CCCEEEEe-CC--------------CCccCCcEEEE-ECCCCCEEEEECCCCEEEEEcCCCCEEEEEccCCccCCCcEEE
Confidence 88 3333 11 12356799999 788999999999999999999998876553333 4699999
Q ss_pred EEecCcCeEEEEEccCC-ceEE
Q 011014 235 VLVAAAFFGYMLALLQR-RVQA 255 (495)
Q Consensus 235 vd~~a~~~~yv~d~~~~-Rv~~ 255 (495)
++. .+.+||++..++ +|..
T Consensus 214 ~d~--~G~l~v~~~~~~~~i~~ 233 (286)
T 1q7f_A 214 INS--NGEILIADNHNNFNLTI 233 (286)
T ss_dssp ECT--TCCEEEEECSSSCEEEE
T ss_pred ECC--CCCEEEEeCCCCEEEEE
Confidence 997 568999999886 8843
No 19
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=99.58 E-value=2.6e-13 Score=153.21 Aligned_cols=150 Identities=14% Similarity=0.094 Sum_probs=113.7
Q ss_pred CCCceEEEEcC-CCcEEEEECCCCeeEEEEc-CCCCccccccCCCcCccccCCcceEEEcC-CCCEEEEECCC-CEEEEE
Q 011014 82 GMEPFSVAVSP-SGELLVLDSENNSRPKLVA-GSPEGYYGHVDGRPRGARMNHPKGLAVDD-RGNIYIADTMN-MAIRKI 157 (495)
Q Consensus 82 ~~~P~GIAVd~-dG~LyVaDs~n~~ii~iva-Gs~~g~~G~~dG~~~~a~f~~P~GIAVD~-dGnIYVAD~~N-~rIrk~ 157 (495)
+..|.|||||. .++||++|..++++.++-. |...... ....|..|.|||||+ .|.|||+|.++ ++|.++
T Consensus 470 l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l-------~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~ 542 (791)
T 3m0c_C 470 IQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTL-------FRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKG 542 (791)
T ss_dssp CSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEE-------EECTTCCEEEEEEETTTTEEEEEECSSSCEEEEE
T ss_pred CCCcceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEE-------EeCCCCCcceEEEecCCCCEEEecCCCCCeEEEE
Confidence 45899999997 4589999999985444322 2211111 123578899999998 58999999986 899999
Q ss_pred cCCC--cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCceeeC----CCCCCcc
Q 011014 158 SDTG--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCSDN----YDDTFHL 231 (495)
Q Consensus 158 d~~G--V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~gN~rI~~~d~~g~~~~~~----~~~g~P~ 231 (495)
+.+| +.++.. ..|..|++|++...++.|||+|..+++|++++++|...... .....|.
T Consensus 543 ~~dG~~~~~lv~----------------~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~ 606 (791)
T 3m0c_C 543 GLNGVDIYSLVT----------------ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPF 606 (791)
T ss_dssp ETTSCCEEEEEC----------------SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEE
T ss_pred ecCCCceEEEEe----------------CCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEecCCCccCCCC
Confidence 9988 344421 24679999996558899999999999999999999775432 2233578
Q ss_pred eEEEEecCcCeEEEEEccCCceEEEe
Q 011014 232 GIFVLVAAAFFGYMLALLQRRVQAMF 257 (495)
Q Consensus 232 GIAvd~~a~~~~yv~d~~~~Rv~~~~ 257 (495)
||+++ +..||++|..+++|.++.
T Consensus 607 glav~---~~~lYwtD~~~~~I~~~d 629 (791)
T 3m0c_C 607 SLAVF---EDKVFWTDIINEAIFSAN 629 (791)
T ss_dssp EEEEE---TTEEEEEETTTTEEEEEE
T ss_pred EEEEe---CCEEEEEECCCCEEEEEe
Confidence 88886 568999999999997664
No 20
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=99.58 E-value=2.9e-13 Score=137.93 Aligned_cols=156 Identities=13% Similarity=0.059 Sum_probs=119.4
Q ss_pred CCCceEEEEcC-CCcEEEEECCCCeeEEEEc-CCCCccccccCCCcCccccCCcceEEEcC-CCCEEEEECCCCEEEEEc
Q 011014 82 GMEPFSVAVSP-SGELLVLDSENNSRPKLVA-GSPEGYYGHVDGRPRGARMNHPKGLAVDD-RGNIYIADTMNMAIRKIS 158 (495)
Q Consensus 82 ~~~P~GIAVd~-dG~LyVaDs~n~~ii~iva-Gs~~g~~G~~dG~~~~a~f~~P~GIAVD~-dGnIYVAD~~N~rIrk~d 158 (495)
+..|.+|++|+ ++.||++|..++++.++.. |+..... ....+..|.|||+|. .|+||++|..+++|.+++
T Consensus 72 ~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~-------~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~ 144 (349)
T 3v64_C 72 LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEV-------VSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVAN 144 (349)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE-------ECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred CCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEE-------EeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEc
Confidence 34799999995 7889999999886655542 2211111 123467899999996 788999999999999999
Q ss_pred CCC--cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECCC-CeEEEEECCCCceeeC--CCCCCcceE
Q 011014 159 DTG--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGN-QAIREIQLHDDDCSDN--YDDTFHLGI 233 (495)
Q Consensus 159 ~~G--V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~gN-~rI~~~d~~g~~~~~~--~~~g~P~GI 233 (495)
.+| ..++.. ..+..|.+|++...+|.||++|.++ ++|.+++++|...... .....|.||
T Consensus 145 ~dG~~~~~l~~----------------~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGl 208 (349)
T 3v64_C 145 LDGAHRKVLLW----------------QSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGL 208 (349)
T ss_dssp TTSCSCEEEEC----------------TTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCCSSCSCEEEE
T ss_pred CCCCceEEEEe----------------CCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCcceE
Confidence 888 344421 2367899999544689999999998 9999999999776543 345579999
Q ss_pred EEEecCcCeEEEEEccCCceEEEeeCCC
Q 011014 234 FVLVAAAFFGYMLALLQRRVQAMFSSKD 261 (495)
Q Consensus 234 Avd~~a~~~~yv~d~~~~Rv~~~~~s~~ 261 (495)
|+|.. +..+|++|..+++|..+-.+..
T Consensus 209 a~d~~-~~~lY~aD~~~~~I~~~~~dG~ 235 (349)
T 3v64_C 209 TIDYA-GRRMYWVDAKHHVIERANLDGS 235 (349)
T ss_dssp EEETT-TTEEEEEETTTTEEEEEETTSC
T ss_pred EEeCC-CCEEEEEECCCCEEEEEeCCCC
Confidence 99952 5789999999999976665543
No 21
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=99.57 E-value=2.3e-13 Score=140.50 Aligned_cols=155 Identities=13% Similarity=0.069 Sum_probs=118.5
Q ss_pred CCCceEEEEcC-CCcEEEEECCCCeeEEEEc-CCCCccccccCCCcCccccCCcceEEEcC-CCCEEEEECCCCEEEEEc
Q 011014 82 GMEPFSVAVSP-SGELLVLDSENNSRPKLVA-GSPEGYYGHVDGRPRGARMNHPKGLAVDD-RGNIYIADTMNMAIRKIS 158 (495)
Q Consensus 82 ~~~P~GIAVd~-dG~LyVaDs~n~~ii~iva-Gs~~g~~G~~dG~~~~a~f~~P~GIAVD~-dGnIYVAD~~N~rIrk~d 158 (495)
+..|.||++|+ ++.||++|..++++.++.. |+..... ....+..|.|||+|. .|+||++|..+++|.+++
T Consensus 115 ~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~-------~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~ 187 (386)
T 3v65_B 115 LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEV-------VSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVAN 187 (386)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEE-------ECSSCSCCCCEEEETTTTEEEEEETTTTEEEECB
T ss_pred CCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEE-------EeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEe
Confidence 34799999995 7889999999886655542 2211111 123567899999996 788999999999999999
Q ss_pred CCC--cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECCC-CeEEEEECCCCceee--CCCCCCcceE
Q 011014 159 DTG--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGN-QAIREIQLHDDDCSD--NYDDTFHLGI 233 (495)
Q Consensus 159 ~~G--V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~gN-~rI~~~d~~g~~~~~--~~~~g~P~GI 233 (495)
.+| ..++.. ..+..|.+|++...+|.||++|.++ ++|.+++++|..... ......|.||
T Consensus 188 ~dg~~~~~l~~----------------~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGl 251 (386)
T 3v65_B 188 LDGAHRKVLLW----------------QSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGL 251 (386)
T ss_dssp TTSCSCEEEEC----------------SSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEE
T ss_pred CCCCceEEeec----------------CCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCeeeE
Confidence 888 344421 2367899999554789999999998 999999999976544 3445579999
Q ss_pred EEEecCcCeEEEEEccCCceEEEeeCC
Q 011014 234 FVLVAAAFFGYMLALLQRRVQAMFSSK 260 (495)
Q Consensus 234 Avd~~a~~~~yv~d~~~~Rv~~~~~s~ 260 (495)
|+|.. +..+|++|..+++|..+-.+.
T Consensus 252 avd~~-~~~lY~aD~~~~~I~~~d~dG 277 (386)
T 3v65_B 252 TIDYA-GRRMYWVDAKHHVIERANLDG 277 (386)
T ss_dssp EEEGG-GTEEEEEETTTTEEEEECTTS
T ss_pred EEeCC-CCEEEEEECCCCEEEEEeCCC
Confidence 99942 578999999999996665544
No 22
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=99.56 E-value=4.3e-13 Score=147.49 Aligned_cols=151 Identities=13% Similarity=0.144 Sum_probs=116.9
Q ss_pred CCCceEEEEcC-CCcEEEEECCCCeeEEEEc--CCCCccccccCCCcCccccCCcceEEEcC-CCCEEEEECCC-CEEEE
Q 011014 82 GMEPFSVAVSP-SGELLVLDSENNSRPKLVA--GSPEGYYGHVDGRPRGARMNHPKGLAVDD-RGNIYIADTMN-MAIRK 156 (495)
Q Consensus 82 ~~~P~GIAVd~-dG~LyVaDs~n~~ii~iva--Gs~~g~~G~~dG~~~~a~f~~P~GIAVD~-dGnIYVAD~~N-~rIrk 156 (495)
+..|.|||||. .++||++|..++++ .++. |+..... ....|+.|.+||+|+ +|.||++|.++ .+|.+
T Consensus 391 ~~~p~GlAvD~~~~~lY~tD~~~~~I-~v~~~~G~~~~~l-------~~~~l~~P~~iavdp~~G~ly~tD~g~~~~I~r 462 (619)
T 3s94_A 391 IAHPDGIAVDWVARNLYWTDTGTDRI-EVTRLNGTMRKIL-------ISEDLEEPRAIVLDPMVGYMYWTDWGEIPKIER 462 (619)
T ss_dssp CSCCCEEEEETTTTEEEEEETTTTEE-EEEETTSCSCEEE-------ECTTCCSEEEEEEETTTTEEEEEECSSSCEEEE
T ss_pred CCCcCceEEecccCcEEEEeCCCCcE-EEEeCCCCeEEEE-------EECCCCCeeeEEEEcCCCcEEEecCCCCCEEEE
Confidence 35899999996 78999999998844 4442 3221111 123689999999998 59999999875 89999
Q ss_pred EcCCC--cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCceee--CCCCCCcce
Q 011014 157 ISDTG--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCSD--NYDDTFHLG 232 (495)
Q Consensus 157 ~d~~G--V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~gN~rI~~~d~~g~~~~~--~~~~g~P~G 232 (495)
++.+| ..++.. ..|..|+||++...++.||++|.++++|.+++++|..... ......|.|
T Consensus 463 ~~~dG~~~~~l~~----------------~~l~~P~GlalD~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~l~~P~g 526 (619)
T 3s94_A 463 AALDGSDRVVLVN----------------TSLGWPNGLALDYDEGKIYWGDAKTDKIEVMNTDGTGRRVLVEDKIPHIFG 526 (619)
T ss_dssp EETTSCSCEEEEC----------------SSCSCEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEEECCCCSSCC
T ss_pred EccCCCccEEEEe----------------CCCCCCeeeEEcccCCEEEEEECCCCEEEEEecCCCceEEEeccCCCCcEE
Confidence 99888 444421 2477999999655689999999999999999999977543 345567999
Q ss_pred EEEEecCcCeEEEEEccCCceEEEeeC
Q 011014 233 IFVLVAAAFFGYMLALLQRRVQAMFSS 259 (495)
Q Consensus 233 IAvd~~a~~~~yv~d~~~~Rv~~~~~s 259 (495)
||++ +..+|++|..+++|..+--.
T Consensus 527 lav~---~~~ly~tD~~~~~I~~~~k~ 550 (619)
T 3s94_A 527 FTLL---GDYVYWTDWQRRSIERVHKR 550 (619)
T ss_dssp EEEE---TTEEEEECTTSSCEEEEESS
T ss_pred EEEE---CCEEEEeecCCCeEEEEEcC
Confidence 9998 45899999999999665433
No 23
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=99.56 E-value=2.9e-13 Score=140.66 Aligned_cols=161 Identities=16% Similarity=0.081 Sum_probs=119.3
Q ss_pred CCCceEEEEcC-CCcEEEEECCCCeeEEEEc-CCCCccccccCCCcCccccCCcceEEEcC-CCCEEEEECCCCEEEEEc
Q 011014 82 GMEPFSVAVSP-SGELLVLDSENNSRPKLVA-GSPEGYYGHVDGRPRGARMNHPKGLAVDD-RGNIYIADTMNMAIRKIS 158 (495)
Q Consensus 82 ~~~P~GIAVd~-dG~LyVaDs~n~~ii~iva-Gs~~g~~G~~dG~~~~a~f~~P~GIAVD~-dGnIYVAD~~N~rIrk~d 158 (495)
+..|.+|++|+ ++.||++|..++++.++.. |.. . .+. ........+..|.|||+|. .++||++|..+++|.+++
T Consensus 111 ~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~-~-~~~-~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~ 187 (400)
T 3p5b_L 111 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAH-G-VSS-YDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVAD 187 (400)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEEC--------CC-CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEC
T ss_pred cCcceEEeeeeccCceEEEecCCCeEEEEEcccCC-C-CCc-ceEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEe
Confidence 35899999997 7889999999986555532 211 0 000 0011123578999999997 789999999999999999
Q ss_pred CCC--cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECC-CCeEEEEECCCCceee--CCCCCCcceE
Q 011014 159 DTG--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRG-NQAIREIQLHDDDCSD--NYDDTFHLGI 233 (495)
Q Consensus 159 ~~G--V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~g-N~rI~~~d~~g~~~~~--~~~~g~P~GI 233 (495)
.+| ..++.. ..+..|.+|++....|.||++|.+ +++|.+++++|..... ......|.||
T Consensus 188 ~~g~~~~~l~~----------------~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l~~P~gl 251 (400)
T 3p5b_L 188 TKGVKRKTLFR----------------ENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGI 251 (400)
T ss_dssp TTTCSEEEEEE----------------CSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSSCSCEEEE
T ss_pred CCCCceEEEEe----------------CCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECCCCceEEE
Confidence 888 344421 136789999965568999999987 5899999999977543 3445679999
Q ss_pred EEEecCcCeEEEEEccCCceEEEeeCCCC
Q 011014 234 FVLVAAAFFGYMLALLQRRVQAMFSSKDD 262 (495)
Q Consensus 234 Avd~~a~~~~yv~d~~~~Rv~~~~~s~~~ 262 (495)
|+|.. +..+|++|..+++|..+-.+...
T Consensus 252 avd~~-~~~lY~aD~~~~~I~~~d~dG~~ 279 (400)
T 3p5b_L 252 TLDLL-SGRLYWVDSKLHSISSIDVNGGN 279 (400)
T ss_dssp EEETT-TTEEEEEETTTTEEEEEETTSCC
T ss_pred EEEeC-CCEEEEEECCCCEEEEEeCCCCc
Confidence 99953 56899999999999766655443
No 24
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=99.56 E-value=4.2e-13 Score=134.44 Aligned_cols=159 Identities=15% Similarity=0.052 Sum_probs=117.3
Q ss_pred CCCceEEEEcC-CCcEEEEECCCCeeEEEEc-CCCCccccccCCCcCccccCCcceEEEcC-CCCEEEEECCCCEEEEEc
Q 011014 82 GMEPFSVAVSP-SGELLVLDSENNSRPKLVA-GSPEGYYGHVDGRPRGARMNHPKGLAVDD-RGNIYIADTMNMAIRKIS 158 (495)
Q Consensus 82 ~~~P~GIAVd~-dG~LyVaDs~n~~ii~iva-Gs~~g~~G~~dG~~~~a~f~~P~GIAVD~-dGnIYVAD~~N~rIrk~d 158 (495)
+..|.||++|+ ++.||++|..++++.++-. |...+.. ........+..|.|||+|. .|+|||+|..+++|.+++
T Consensus 29 ~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~---~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~ 105 (316)
T 1ijq_A 29 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSS---YDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVAD 105 (316)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEEC-----------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred CCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcc---cEEEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEe
Confidence 35799999997 5789999999885555532 2100000 0001123578999999995 788999999999999999
Q ss_pred CCC--cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECCC-CeEEEEECCCCceee--CCCCCCcceE
Q 011014 159 DTG--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGN-QAIREIQLHDDDCSD--NYDDTFHLGI 233 (495)
Q Consensus 159 ~~G--V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~gN-~rI~~~d~~g~~~~~--~~~~g~P~GI 233 (495)
.+| ..++.. ..+..|.+|++...+|.||++|.++ ++|.+++++|..... ......|.||
T Consensus 106 ~~g~~~~~~~~----------------~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~~~~~~~~~~P~gl 169 (316)
T 1ijq_A 106 TKGVKRKTLFR----------------ENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGI 169 (316)
T ss_dssp TTSSSEEEEEE----------------CTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEE
T ss_pred CCCCceEEEEE----------------CCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCeEEEEECCCCCceEE
Confidence 888 344421 1356899999544689999999986 899999999977543 2345679999
Q ss_pred EEEecCcCeEEEEEccCCceEEEeeCC
Q 011014 234 FVLVAAAFFGYMLALLQRRVQAMFSSK 260 (495)
Q Consensus 234 Avd~~a~~~~yv~d~~~~Rv~~~~~s~ 260 (495)
++|.. +..+|++|..+++|..+-.+.
T Consensus 170 a~d~~-~~~lY~~D~~~~~I~~~d~dg 195 (316)
T 1ijq_A 170 TLDLL-SGRLYWVDSKLHSISSIDVNG 195 (316)
T ss_dssp EEETT-TTEEEEEETTTTEEEEEETTS
T ss_pred EEecc-CCEEEEEECCCCeEEEEecCC
Confidence 99952 568999999999997666554
No 25
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.54 E-value=3.2e-13 Score=130.06 Aligned_cols=155 Identities=18% Similarity=0.229 Sum_probs=116.1
Q ss_pred CCCCceEEEEcCCCcEEEEECCCCeeEEEEcCCC--CccccccCCCcCccccCCcceEEE-cCCCCEEEEECC-CCEEEE
Q 011014 81 FGMEPFSVAVSPSGELLVLDSENNSRPKLVAGSP--EGYYGHVDGRPRGARMNHPKGLAV-DDRGNIYIADTM-NMAIRK 156 (495)
Q Consensus 81 ~~~~P~GIAVd~dG~LyVaDs~n~~ii~ivaGs~--~g~~G~~dG~~~~a~f~~P~GIAV-D~dGnIYVAD~~-N~rIrk 156 (495)
.+..|.+|+++++|+|||+|..++ .+.++.... ....+. .+ .....+..|.+|++ +++|+|||+|.. +++|++
T Consensus 28 ~~~~p~~v~~~~~g~l~v~~~~~~-~i~~~d~~g~~~~~~~~-~~-~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~ 104 (286)
T 1q7f_A 28 QFTEPSGVAVNAQNDIIVADTNNH-RIQIFDKEGRFKFQFGE-CG-KRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQI 104 (286)
T ss_dssp CBSCEEEEEECTTCCEEEEEGGGT-EEEEECTTSCEEEEECC-BS-SSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEE
T ss_pred ccCCCceEEECCCCCEEEEECCCC-EEEEECCCCcEEEEecc-cC-CCcccccCceEEEEEcCCCeEEEEcCCCCCEEEE
Confidence 346899999999999999998887 444443222 111111 11 12346788999999 589999999975 899999
Q ss_pred EcCCC--cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCceeeC---CCCCCcc
Q 011014 157 ISDTG--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCSDN---YDDTFHL 231 (495)
Q Consensus 157 ~d~~G--V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~gN~rI~~~d~~g~~~~~~---~~~g~P~ 231 (495)
++.+| +.++ +. ..+..|.+|+ ++.+|+|||+|..+++|+++++++...... .....|.
T Consensus 105 ~d~~g~~~~~~-~~---------------~~~~~~~~i~-~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~p~ 167 (286)
T 1q7f_A 105 YNQYGQFVRKF-GA---------------TILQHPRGVT-VDNKGRIIVVECKVMRVIIFDQNGNVLHKFGCSKHLEFPN 167 (286)
T ss_dssp ECTTSCEEEEE-CT---------------TTCSCEEEEE-ECTTSCEEEEETTTTEEEEECTTSCEEEEEECTTTCSSEE
T ss_pred ECCCCcEEEEe-cC---------------ccCCCceEEE-EeCCCCEEEEECCCCEEEEEcCCCCEEEEeCCCCccCCcE
Confidence 99888 3333 11 1356799999 688999999999999999999998766543 3334699
Q ss_pred eEEEEecCcCeEEEEEccCCceEEEe
Q 011014 232 GIFVLVAAAFFGYMLALLQRRVQAMF 257 (495)
Q Consensus 232 GIAvd~~a~~~~yv~d~~~~Rv~~~~ 257 (495)
+|+++. .+.+||++..+++|..+-
T Consensus 168 ~i~~~~--~g~l~v~~~~~~~i~~~~ 191 (286)
T 1q7f_A 168 GVVVND--KQEIFISDNRAHCVKVFN 191 (286)
T ss_dssp EEEECS--SSEEEEEEGGGTEEEEEE
T ss_pred EEEECC--CCCEEEEECCCCEEEEEc
Confidence 999997 567999999999995543
No 26
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=99.54 E-value=4.2e-13 Score=151.56 Aligned_cols=161 Identities=15% Similarity=0.056 Sum_probs=119.8
Q ss_pred CCCceEEEEcC-CCcEEEEECCCCeeEEEEc-CCCCccccccCCCcCccccCCcceEEEcCC-CCEEEEECCCCEEEEEc
Q 011014 82 GMEPFSVAVSP-SGELLVLDSENNSRPKLVA-GSPEGYYGHVDGRPRGARMNHPKGLAVDDR-GNIYIADTMNMAIRKIS 158 (495)
Q Consensus 82 ~~~P~GIAVd~-dG~LyVaDs~n~~ii~iva-Gs~~g~~G~~dG~~~~a~f~~P~GIAVD~d-GnIYVAD~~N~rIrk~d 158 (495)
+..|.+|++|. ++.||++|..++++.++.. |.. ..+. ........|..|.|||||.. ++|||+|..+++|++++
T Consensus 423 ~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~--~~~~-~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ 499 (791)
T 3m0c_C 423 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAH--GVSS-YDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVAD 499 (791)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEEC-----------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred CCceEEEeecccCCeeEEeeccceeEEEEeccCCC--CCcc-eeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEe
Confidence 45799999997 7889999999885555432 211 0000 01112236889999999975 58999999999999999
Q ss_pred CCC--cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECCC-CeEEEEECCCCceee--CCCCCCcceE
Q 011014 159 DTG--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGN-QAIREIQLHDDDCSD--NYDDTFHLGI 233 (495)
Q Consensus 159 ~~G--V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~gN-~rI~~~d~~g~~~~~--~~~~g~P~GI 233 (495)
.+| +.++.. ..|..|.+|++....|.||++|.++ ++|.+++++|..... ......|.||
T Consensus 500 ldG~~~~~l~~----------------~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~~P~GL 563 (791)
T 3m0c_C 500 TKGVKRKTLFR----------------ENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGI 563 (791)
T ss_dssp TTSSSEEEEEE----------------CTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEE
T ss_pred CCCCeEEEEEe----------------CCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCCCceEE
Confidence 888 344422 1366899999655679999999987 899999999987654 3344579999
Q ss_pred EEEecCcCeEEEEEccCCceEEEeeCCCC
Q 011014 234 FVLVAAAFFGYMLALLQRRVQAMFSSKDD 262 (495)
Q Consensus 234 Avd~~a~~~~yv~d~~~~Rv~~~~~s~~~ 262 (495)
|||.. ...||++|..+++|..+-.+...
T Consensus 564 avD~~-~~~LYwaD~~~~~I~~~d~dG~~ 591 (791)
T 3m0c_C 564 TLDLL-SGRLYWVDSKLHSISSIDVNGGN 591 (791)
T ss_dssp EEETT-TTEEEEEETTTTEEEEEETTSCS
T ss_pred EEecC-CCeEEEEeCCCCcEEEEecCCCc
Confidence 99952 57899999999999776665544
No 27
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.53 E-value=1.6e-12 Score=123.36 Aligned_cols=150 Identities=25% Similarity=0.255 Sum_probs=111.2
Q ss_pred CCCceEEEEcCCCcEEEEECCCCeeEEEEcCCCCccccccCCCcCccccCCcceEEEcCCCCEEEEECCCCEEEEEcCCC
Q 011014 82 GMEPFSVAVSPSGELLVLDSENNSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMNMAIRKISDTG 161 (495)
Q Consensus 82 ~~~P~GIAVd~dG~LyVaDs~n~~ii~ivaGs~~g~~G~~dG~~~~a~f~~P~GIAVD~dGnIYVAD~~N~rIrk~d~~G 161 (495)
+..|.+|+++++|+|||++. ++ .+..+.......... ....+..|.+|++|++|+|||+|..+++|.+++...
T Consensus 66 ~~~p~~i~~~~~g~l~v~~~-~~-~i~~~d~~~~~~~~~-----~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~ 138 (270)
T 1rwi_B 66 LYQPQGLAVDGAGTVYVTDF-NN-RVVTLAAGSNNQTVL-----PFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGS 138 (270)
T ss_dssp CCSCCCEEECTTCCEEEEET-TT-EEEEECTTCSCCEEC-----CCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTC
T ss_pred cCCcceeEECCCCCEEEEcC-CC-EEEEEeCCCceEeee-----ecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCC
Confidence 35799999999999999998 55 444443221111000 112457899999999999999999999999997554
Q ss_pred -cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCceeeC--CCCCCcceEEEEec
Q 011014 162 -VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCSDN--YDDTFHLGIFVLVA 238 (495)
Q Consensus 162 -V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~gN~rI~~~d~~g~~~~~~--~~~g~P~GIAvd~~ 238 (495)
...... ...+..|.+|+ ++.+|+|||+|..+++|.++++++...... .....|.+|+++.
T Consensus 139 ~~~~~~~---------------~~~~~~p~~i~-~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~- 201 (270)
T 1rwi_B 139 KTQTVLP---------------FTGLNDPDGVA-VDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDE- 201 (270)
T ss_dssp CSCEECC---------------CCSCCSCCCEE-ECTTCCEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECT-
T ss_pred ceeEeec---------------cccCCCceeEE-EeCCCCEEEEECCCCEEEEEecCCCceEeecccCCCCceEEEECC-
Confidence 222210 12356799999 688999999999999999999998776543 2335699999996
Q ss_pred CcCeEEEEEccCCceEEE
Q 011014 239 AAFFGYMLALLQRRVQAM 256 (495)
Q Consensus 239 a~~~~yv~d~~~~Rv~~~ 256 (495)
.+.+||++..+++|..+
T Consensus 202 -~g~l~v~~~~~~~v~~~ 218 (270)
T 1rwi_B 202 -AGTVYVTEHNTNQVVKL 218 (270)
T ss_dssp -TCCEEEEETTTSCEEEE
T ss_pred -CCCEEEEECCCCcEEEE
Confidence 45899999999999544
No 28
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.52 E-value=6.3e-13 Score=128.16 Aligned_cols=152 Identities=13% Similarity=0.068 Sum_probs=113.0
Q ss_pred CceEEEEcC-CCcEEEEECCCCeeEEEEc-CCCCccccccCCCcCccccCCcceEEEcC-CCCEEEEECCCCEEEEEcCC
Q 011014 84 EPFSVAVSP-SGELLVLDSENNSRPKLVA-GSPEGYYGHVDGRPRGARMNHPKGLAVDD-RGNIYIADTMNMAIRKISDT 160 (495)
Q Consensus 84 ~P~GIAVd~-dG~LyVaDs~n~~ii~iva-Gs~~g~~G~~dG~~~~a~f~~P~GIAVD~-dGnIYVAD~~N~rIrk~d~~ 160 (495)
.|.+|++|+ +++||++|..++.+.++-. |...... ....+..|.+|++|+ .|+|||+|..+++|.+++.+
T Consensus 37 ~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~-------~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~ 109 (267)
T 1npe_A 37 VIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTI-------IRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMD 109 (267)
T ss_dssp EEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEE-------ECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred cEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEE-------EECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcC
Confidence 699999998 5789999998885544432 2211110 112567999999998 57899999999999999988
Q ss_pred C--cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECC--CCeEEEEECCCCceee--CCCCCCcceEE
Q 011014 161 G--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRG--NQAIREIQLHDDDCSD--NYDDTFHLGIF 234 (495)
Q Consensus 161 G--V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~g--N~rI~~~d~~g~~~~~--~~~~g~P~GIA 234 (495)
| ..++.. ..+..|.+|++...++.|||+|.+ +++|.+++++|..... ......|.||+
T Consensus 110 g~~~~~~~~----------------~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~~~~~~~~~P~gia 173 (267)
T 1npe_A 110 GTQRRVLFD----------------TGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQDNLGLPNGLT 173 (267)
T ss_dssp SCSCEEEEC----------------SSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEEECTTCSCEEEEE
T ss_pred CCCEEEEEE----------------CCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcEEEEECCCCCCcEEE
Confidence 7 344421 125689999954447999999987 7899999999876433 23456799999
Q ss_pred EEecCcCeEEEEEccCCceEEEeeC
Q 011014 235 VLVAAAFFGYMLALLQRRVQAMFSS 259 (495)
Q Consensus 235 vd~~a~~~~yv~d~~~~Rv~~~~~s 259 (495)
++. .+..+|+++..+++|..+-.+
T Consensus 174 ~d~-~~~~lyv~d~~~~~I~~~~~~ 197 (267)
T 1npe_A 174 FDA-FSSQLCWVDAGTHRAECLNPA 197 (267)
T ss_dssp EET-TTTEEEEEETTTTEEEEEETT
T ss_pred EcC-CCCEEEEEECCCCEEEEEecC
Confidence 996 246899999999999655443
No 29
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=99.52 E-value=1.6e-12 Score=143.28 Aligned_cols=150 Identities=12% Similarity=0.143 Sum_probs=115.2
Q ss_pred CCCceEEEEcCC-CcEEEEECCCCeeEEEEcCCCCccccccCCCcCccccCCcceEEEcC-CCCEEEEECCCC--EEEEE
Q 011014 82 GMEPFSVAVSPS-GELLVLDSENNSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDD-RGNIYIADTMNM--AIRKI 157 (495)
Q Consensus 82 ~~~P~GIAVd~d-G~LyVaDs~n~~ii~ivaGs~~g~~G~~dG~~~~a~f~~P~GIAVD~-dGnIYVAD~~N~--rIrk~ 157 (495)
+..|.|||+|.. ++||++|+.++ .+.+..-.+ ..- .......+..|.+||+|+ +|.||++|.+++ +|.++
T Consensus 388 ~~~p~glAvD~~~~nLY~td~~~~-~I~v~~~~G--~~~---~~l~~~~l~~Pr~iavdp~~g~ly~tD~g~~~~~I~r~ 461 (628)
T 4a0p_A 388 EIQPYDLSIDIYSRYIYWTCEATN-VINVTRLDG--RSV---GVVLKGEQDRPRAVVVNPEKGYMYFTNLQERSPKIERA 461 (628)
T ss_dssp CCCEEEEEEETTTTEEEEEETTTT-EEEEEETTS--CEE---EEEEECTTCCEEEEEEETTTTEEEEEEEETTEEEEEEE
T ss_pred cCCcceEEeeccCCeEEEEcCCCC-EEEEEECCC--CeE---EEEEeCCCCceeeEEEecCCCeEEEeecCCCCCeEEEE
Confidence 458999999984 78999999888 444432221 110 001123578999999999 899999999987 79999
Q ss_pred cCCC--cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCceeeC--CCCCCcceE
Q 011014 158 SDTG--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCSDN--YDDTFHLGI 233 (495)
Q Consensus 158 d~~G--V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~gN~rI~~~d~~g~~~~~~--~~~g~P~GI 233 (495)
+.+| ..++.. ..+..|++|++...++.||++|..+++|.+++++|...... .....|.||
T Consensus 462 ~~dG~~~~~l~~----------------~~l~~P~gla~D~~~~~LYw~D~~~~~I~~~~~dG~~r~~~~~~~~~~P~gl 525 (628)
T 4a0p_A 462 ALDGTEREVLFF----------------SGLSKPIALALDSRLGKLFWADSDLRRIESSDLSGANRIVLEDSNILQPVGL 525 (628)
T ss_dssp ETTSCSCEEEEC----------------SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCEEEE
T ss_pred eCCCCCcEEEEe----------------ccCCCccEEEEeCCCCEEEEEeCCCCEEEEEeCCCCceEEEEcCCCCCcEEE
Confidence 9988 455522 13679999996555789999999999999999999776543 345579999
Q ss_pred EEEecCcCeEEEEEccCCceEEE
Q 011014 234 FVLVAAAFFGYMLALLQRRVQAM 256 (495)
Q Consensus 234 Avd~~a~~~~yv~d~~~~Rv~~~ 256 (495)
|++ +..+|++|..+++|..+
T Consensus 526 av~---~~~ly~tD~~~~~i~~~ 545 (628)
T 4a0p_A 526 TVF---ENWLYWIDKQQQMIEKI 545 (628)
T ss_dssp EEE---TTEEEEEETTTTEEEEE
T ss_pred EEE---CCEEEEEECCCCeEEEE
Confidence 998 47999999999999543
No 30
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=99.52 E-value=2e-12 Score=142.42 Aligned_cols=148 Identities=16% Similarity=0.115 Sum_probs=114.5
Q ss_pred CCceEEEEcC-CCcEEEEECCCCeeEEEE-cCCCCccccccCCCcCccccCCcceEEEcC-CCCEEEEECC-CCEEEEEc
Q 011014 83 MEPFSVAVSP-SGELLVLDSENNSRPKLV-AGSPEGYYGHVDGRPRGARMNHPKGLAVDD-RGNIYIADTM-NMAIRKIS 158 (495)
Q Consensus 83 ~~P~GIAVd~-dG~LyVaDs~n~~ii~iv-aGs~~g~~G~~dG~~~~a~f~~P~GIAVD~-dGnIYVAD~~-N~rIrk~d 158 (495)
..|.|||||. .|+||++|..++++..+- .|+..... ....|..|.+||+|+ +|.||++|.+ +.+|.+++
T Consensus 80 ~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l-------~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~ 152 (628)
T 4a0p_A 80 DYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVL-------VWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAA 152 (628)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCEEE-------ECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEE
T ss_pred CCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEEE-------EeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEe
Confidence 4799999996 688999999998444432 23221111 124678999999997 8999999987 88999999
Q ss_pred CCC--cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCceee-CCCCCCcceEEE
Q 011014 159 DTG--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCSD-NYDDTFHLGIFV 235 (495)
Q Consensus 159 ~~G--V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~gN~rI~~~d~~g~~~~~-~~~~g~P~GIAv 235 (495)
.+| +.++.. .+..|++|++...++.||++|..+++|.+++++|..... ......|.||++
T Consensus 153 ~dG~~~~~l~~-----------------~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~~v~~~~l~~P~glav 215 (628)
T 4a0p_A 153 MDGSERTTLVP-----------------NVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNREVIADDLPHPFGLTQ 215 (628)
T ss_dssp TTSCSCEEEEC-----------------SCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECCSCEEEEEE
T ss_pred CCCCceEEEEC-----------------CCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCceEEeeccCCCceEEEE
Confidence 888 555531 256899999655579999999999999999999965533 334557999999
Q ss_pred EecCcCeEEEEEccCCceEEEe
Q 011014 236 LVAAAFFGYMLALLQRRVQAMF 257 (495)
Q Consensus 236 d~~a~~~~yv~d~~~~Rv~~~~ 257 (495)
+ +..+|++|+.+++|..+-
T Consensus 216 ~---~~~ly~tD~~~~~I~~~d 234 (628)
T 4a0p_A 216 Y---QDYIYWTDWSRRSIERAN 234 (628)
T ss_dssp E---TTEEEEEETTTTEEEEEE
T ss_pred E---CCEEEEecCCCCEEEEEE
Confidence 9 468999999999996554
No 31
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=99.50 E-value=2.6e-12 Score=129.72 Aligned_cols=155 Identities=13% Similarity=0.026 Sum_probs=117.6
Q ss_pred CceEEEEcC-CCcEEEEECCCCeeEEEEc-CCCCccccccCCCcCccccCCcceEEEcC-CCCEEEEECCCCEEEEEcCC
Q 011014 84 EPFSVAVSP-SGELLVLDSENNSRPKLVA-GSPEGYYGHVDGRPRGARMNHPKGLAVDD-RGNIYIADTMNMAIRKISDT 160 (495)
Q Consensus 84 ~P~GIAVd~-dG~LyVaDs~n~~ii~iva-Gs~~g~~G~~dG~~~~a~f~~P~GIAVD~-dGnIYVAD~~N~rIrk~d~~ 160 (495)
.|.+|++|+ +|.||++|..++++.++.. |+... .......|..|.|||+|. .|+||++|..+++|.+++.+
T Consensus 36 ~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~------~~~~~~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~d 109 (318)
T 3sov_A 36 DAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESV------QNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLD 109 (318)
T ss_dssp EEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCC------CEEEEECCSCCCEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred ccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCce------EEEEcCCCCCccEEEEEcCCCeEEEEECCCCEEEEEECC
Confidence 688999987 6889999999886555532 22100 001123577899999996 88999999999999999988
Q ss_pred C--cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECC-CCeEEEEECCCCceee--CCCCCCcceEEE
Q 011014 161 G--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRG-NQAIREIQLHDDDCSD--NYDDTFHLGIFV 235 (495)
Q Consensus 161 G--V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~g-N~rI~~~d~~g~~~~~--~~~~g~P~GIAv 235 (495)
| ..++.. ..+..|.+|++....|.||++|.+ +++|.+++++|..... ......|.|||+
T Consensus 110 G~~~~~l~~----------------~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l~~Pnglav 173 (318)
T 3sov_A 110 GSLRKVLFW----------------QELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTL 173 (318)
T ss_dssp SCSCEEEEC----------------SSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEE
T ss_pred CCcEEEEEe----------------CCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECCCCCccEEEE
Confidence 8 344421 236789999955468999999986 7999999999976543 344567999999
Q ss_pred EecCcCeEEEEEccCCceEEEeeCCC
Q 011014 236 LVAAAFFGYMLALLQRRVQAMFSSKD 261 (495)
Q Consensus 236 d~~a~~~~yv~d~~~~Rv~~~~~s~~ 261 (495)
|.. +..+|++|..+++|..+-.+..
T Consensus 174 d~~-~~~lY~aD~~~~~I~~~d~dG~ 198 (318)
T 3sov_A 174 DYE-EQKLYWADAKLNFIHKSNLDGT 198 (318)
T ss_dssp ETT-TTEEEEEETTTTEEEEEETTSC
T ss_pred ecc-CCEEEEEECCCCEEEEEcCCCC
Confidence 952 5689999999999977666543
No 32
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=99.50 E-value=9.7e-13 Score=144.66 Aligned_cols=159 Identities=19% Similarity=0.180 Sum_probs=122.5
Q ss_pred CCCceEEEEcC-CCcEEEEECCCCeeEEEEc-CCCCccccccCCCcCccccCCcceEEEcC-CCCEEEEECCCCEEEEEc
Q 011014 82 GMEPFSVAVSP-SGELLVLDSENNSRPKLVA-GSPEGYYGHVDGRPRGARMNHPKGLAVDD-RGNIYIADTMNMAIRKIS 158 (495)
Q Consensus 82 ~~~P~GIAVd~-dG~LyVaDs~n~~ii~iva-Gs~~g~~G~~dG~~~~a~f~~P~GIAVD~-dGnIYVAD~~N~rIrk~d 158 (495)
+..|.+|++|+ +|.||++|..++++.++.. |+..... ....+..|.|||+|. .++||++|..+++|.+++
T Consensus 348 l~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~v-------~~~~~~~p~GlAvD~~~~~lY~tD~~~~~I~v~~ 420 (619)
T 3s94_A 348 IRHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFV-------VTAQIAHPDGIAVDWVARNLYWTDTGTDRIEVTR 420 (619)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE-------ECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred cCccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCccEEE-------EECCCCCcCceEEecccCcEEEEeCCCCcEEEEe
Confidence 35799999997 7889999998886655542 3221111 123578999999996 788999999999999999
Q ss_pred CCC--cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECCC-CeEEEEECCCCceee--CCCCCCcceE
Q 011014 159 DTG--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGN-QAIREIQLHDDDCSD--NYDDTFHLGI 233 (495)
Q Consensus 159 ~~G--V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~gN-~rI~~~d~~g~~~~~--~~~~g~P~GI 233 (495)
.+| ..++.. ..|..|.+|++.+..|.||++|.++ .+|.+++++|..... ......|.||
T Consensus 421 ~~G~~~~~l~~----------------~~l~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~l~~P~Gl 484 (619)
T 3s94_A 421 LNGTMRKILIS----------------EDLEEPRAIVLDPMVGYMYWTDWGEIPKIERAALDGSDRVVLVNTSLGWPNGL 484 (619)
T ss_dssp TTSCSCEEEEC----------------TTCCSEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEE
T ss_pred CCCCeEEEEEE----------------CCCCCeeeEEEEcCCCcEEEecCCCCCEEEEEccCCCccEEEEeCCCCCCeee
Confidence 888 445532 1478999999655579999999875 899999999976543 3456689999
Q ss_pred EEEecCcCeEEEEEccCCceEEEeeCCCCCc
Q 011014 234 FVLVAAAFFGYMLALLQRRVQAMFSSKDDPR 264 (495)
Q Consensus 234 Avd~~a~~~~yv~d~~~~Rv~~~~~s~~~~~ 264 (495)
|+|.. ...||++|..++||..+..+....+
T Consensus 485 alD~~-~~~LY~aD~~~~~I~~~~~dG~~~~ 514 (619)
T 3s94_A 485 ALDYD-EGKIYWGDAKTDKIEVMNTDGTGRR 514 (619)
T ss_dssp EEETT-TTEEEEEETTTTEEEEEESSSCCCE
T ss_pred EEccc-CCEEEEEECCCCEEEEEecCCCceE
Confidence 99963 5689999999999987776655433
No 33
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.44 E-value=4.3e-11 Score=114.22 Aligned_cols=151 Identities=11% Similarity=0.125 Sum_probs=112.5
Q ss_pred CCCceEEEEcCCCcEEEEECCCCeeEEEEcCCCCccccccCCCcCccccCCcceEEEcCCCCEEEEECCCCEEEEEcCCC
Q 011014 82 GMEPFSVAVSPSGELLVLDSENNSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMNMAIRKISDTG 161 (495)
Q Consensus 82 ~~~P~GIAVd~dG~LyVaDs~n~~ii~ivaGs~~g~~G~~dG~~~~a~f~~P~GIAVD~dGnIYVAD~~N~rIrk~d~~G 161 (495)
...|.+|+++++|+|||++..++.+..+ .... ..-... ....+..|.+|++|++|+|||++..+++|.+++.+|
T Consensus 103 ~~~~~~i~~~~~g~l~v~~~~~~~i~~~-~~~g--~~~~~~---~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~g 176 (300)
T 2qc5_A 103 DSGPYGITEGLNGDIWFTQLNGDRIGKL-TADG--TIYEYD---LPNKGSYPAFITLGSDNALWFTENQNNSIGRITNTG 176 (300)
T ss_dssp TCCEEEEEECSTTCEEEEETTTTEEEEE-CTTS--CEEEEE---CSSTTCCEEEEEECTTSSEEEEETTTTEEEEECTTC
T ss_pred CCCCccceECCCCCEEEEccCCCeEEEE-CCCC--CEEEcc---CCCCCCCceeEEECCCCCEEEEecCCCeEEEECCCC
Confidence 3579999999999999999877744443 3221 111000 011356899999999999999999999999999877
Q ss_pred -cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCceee--CCCCCCcceEEEEec
Q 011014 162 -VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCSD--NYDDTFHLGIFVLVA 238 (495)
Q Consensus 162 -V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~gN~rI~~~d~~g~~~~~--~~~~g~P~GIAvd~~ 238 (495)
+..+.. ...+..|.+|+ ++.+|+|||++..+++|.++++++..... ......|.+|+++.
T Consensus 177 ~~~~~~~---------------~~~~~~~~~i~-~d~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~d~- 239 (300)
T 2qc5_A 177 KLEEYPL---------------PTNAAAPVGIT-SGNDGALWFVEIMGNKIGRITTTGEISEYDIPTPNARPHAITAGK- 239 (300)
T ss_dssp CEEEEEC---------------SSTTCCEEEEE-ECTTSSEEEEETTTTEEEEECTTCCEEEEECSSTTCCEEEEEECS-
T ss_pred cEEEeeC---------------CCCCCCcceEE-ECCCCCEEEEccCCCEEEEEcCCCcEEEEECCCCCCCceEEEECC-
Confidence 433321 11246789998 68899999999999999999997765543 22345699999996
Q ss_pred CcCeEEEEEccCCceEEE
Q 011014 239 AAFFGYMLALLQRRVQAM 256 (495)
Q Consensus 239 a~~~~yv~d~~~~Rv~~~ 256 (495)
.+.+|+++..+++|..+
T Consensus 240 -~g~l~v~~~~~~~i~~~ 256 (300)
T 2qc5_A 240 -NSEIWFTEWGANQIGRI 256 (300)
T ss_dssp -TTCEEEEETTTTEEEEE
T ss_pred -CCCEEEeccCCCeEEEE
Confidence 56799999988999544
No 34
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.43 E-value=3.8e-11 Score=114.57 Aligned_cols=149 Identities=13% Similarity=0.195 Sum_probs=110.5
Q ss_pred CCCceEEEEcCCCcEEEEECCCCeeEEEEcCCCCccccccCCCcCccccCCcceEEEcCCCCEEEEECCCCEEEEEcCCC
Q 011014 82 GMEPFSVAVSPSGELLVLDSENNSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMNMAIRKISDTG 161 (495)
Q Consensus 82 ~~~P~GIAVd~dG~LyVaDs~n~~ii~ivaGs~~g~~G~~dG~~~~a~f~~P~GIAVD~dGnIYVAD~~N~rIrk~d~~G 161 (495)
+..|.+|+++++|+|||++..++.+..+ .... ...... ....+..|.+|++|++|+|||++..+++|.+++.+|
T Consensus 145 ~~~~~~i~~d~~g~l~v~~~~~~~i~~~-~~~g--~~~~~~---~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~g 218 (300)
T 2qc5_A 145 GSYPAFITLGSDNALWFTENQNNSIGRI-TNTG--KLEEYP---LPTNAAAPVGITSGNDGALWFVEIMGNKIGRITTTG 218 (300)
T ss_dssp TCCEEEEEECTTSSEEEEETTTTEEEEE-CTTC--CEEEEE---CSSTTCCEEEEEECTTSSEEEEETTTTEEEEECTTC
T ss_pred CCCceeEEECCCCCEEEEecCCCeEEEE-CCCC--cEEEee---CCCCCCCcceEEECCCCCEEEEccCCCEEEEEcCCC
Confidence 4579999999999999999987744444 2221 111101 112457899999999999999999999999999877
Q ss_pred -cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCceee--CCCCCCcceEEEEec
Q 011014 162 -VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCSD--NYDDTFHLGIFVLVA 238 (495)
Q Consensus 162 -V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~gN~rI~~~d~~g~~~~~--~~~~g~P~GIAvd~~ 238 (495)
+..+... ..+..|.+|+ ++.+|+|||++.++++|.+|++++..... ......|.+|+++.
T Consensus 219 ~~~~~~~~---------------~~~~~~~~i~-~d~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~~~- 281 (300)
T 2qc5_A 219 EISEYDIP---------------TPNARPHAIT-AGKNSEIWFTEWGANQIGRITNDNTIQEYQLQTENAEPHGITFGK- 281 (300)
T ss_dssp CEEEEECS---------------STTCCEEEEE-ECSTTCEEEEETTTTEEEEECTTSCEEEEECCSTTCCCCCEEECT-
T ss_pred cEEEEECC---------------CCCCCceEEE-ECCCCCEEEeccCCCeEEEECCCCcEEEEECCccCCccceeEeCC-
Confidence 3333210 1246789998 78899999999999999999997765443 22345699999996
Q ss_pred CcCeEEEEEccCCceEEE
Q 011014 239 AAFFGYMLALLQRRVQAM 256 (495)
Q Consensus 239 a~~~~yv~d~~~~Rv~~~ 256 (495)
.+.+|+++. + +|..+
T Consensus 282 -~g~l~v~~~-~-~i~~~ 296 (300)
T 2qc5_A 282 -DGSVWFALK-C-KIGKL 296 (300)
T ss_dssp -TSCEEEECS-S-EEEEE
T ss_pred -CCCEEEEcc-C-ceEEe
Confidence 567999988 6 88544
No 35
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=99.39 E-value=1.2e-12 Score=145.69 Aligned_cols=151 Identities=13% Similarity=0.072 Sum_probs=110.4
Q ss_pred CCCceEEEEcC-CCcEEEEECCCCeeEEEEcCCCCccccccCCCcCccccCCcceEEEcC-CCCEEEEECCC-CEEEEEc
Q 011014 82 GMEPFSVAVSP-SGELLVLDSENNSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDD-RGNIYIADTMN-MAIRKIS 158 (495)
Q Consensus 82 ~~~P~GIAVd~-dG~LyVaDs~n~~ii~ivaGs~~g~~G~~dG~~~~a~f~~P~GIAVD~-dGnIYVAD~~N-~rIrk~d 158 (495)
+..|.|||||. .|+|||+|..++++ .++...+..... .....+..|.|||||+ .|.||++|.++ ++|.+++
T Consensus 452 ~~~P~glavD~~~g~LY~tD~~~~~I-~v~d~dg~~~~~-----l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~ 525 (699)
T 1n7d_A 452 IQAPDGLAVDWIHSNIYWTDSVLGTV-SVADTKGVKRKT-----LFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGG 525 (699)
T ss_dssp C--CCCEECCCSSSBCEECCTTTSCE-EEEBSSSCCEEE-----ECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCC
T ss_pred CCCcceEEEEeeCCcEEEEeccCCeE-EEEecCCCceEE-----EEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEe
Confidence 35799999994 78999999988844 444322111000 1123578899999998 68899999876 8999999
Q ss_pred CCC--cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCceeeC----CCCCCcce
Q 011014 159 DTG--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCSDN----YDDTFHLG 232 (495)
Q Consensus 159 ~~G--V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~gN~rI~~~d~~g~~~~~~----~~~g~P~G 232 (495)
.+| ..++.. ..|..|++|++....+.|||+|..+++|.+++++|...... ...+.|.|
T Consensus 526 ~dG~~~~~l~~----------------~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~g 589 (699)
T 1n7d_A 526 LNGVDIYSLVT----------------ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFS 589 (699)
T ss_dssp SSSCCCCEESC----------------SSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEECCCSSSCSSCCC
T ss_pred CCCCCeeEEEe----------------CCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCceEEEEecCCcCCCceE
Confidence 887 333311 24678999995335789999999999999999998654432 23457999
Q ss_pred EEEEecCcCeEEEEEccCCceEEEe
Q 011014 233 IFVLVAAAFFGYMLALLQRRVQAMF 257 (495)
Q Consensus 233 IAvd~~a~~~~yv~d~~~~Rv~~~~ 257 (495)
|+++. ..+|++++.+++|..+.
T Consensus 590 lavd~---~~lywtd~~~~~V~~~d 611 (699)
T 1n7d_A 590 LAVFE---DKVFWTDIINEAIFSAN 611 (699)
T ss_dssp CEEET---TEEEEECSTTTCEEEEE
T ss_pred eEEEC---CEEEEEeCCCCeEEEEE
Confidence 99994 58999999999996553
No 36
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.36 E-value=6.8e-12 Score=124.37 Aligned_cols=143 Identities=13% Similarity=0.055 Sum_probs=100.2
Q ss_pred CCceEEEEcC-CCcEEEEECCCCeeEEEEcCCCCccccccCCCcCccccCCcceEEEcC-CCCEEEEECCC---------
Q 011014 83 MEPFSVAVSP-SGELLVLDSENNSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDD-RGNIYIADTMN--------- 151 (495)
Q Consensus 83 ~~P~GIAVd~-dG~LyVaDs~n~~ii~ivaGs~~g~~G~~dG~~~~a~f~~P~GIAVD~-dGnIYVAD~~N--------- 151 (495)
..|.||++++ +|+|||+|..+. +.. +.-.. +..-..........+..|.+|++|+ +|+|||+|..+
T Consensus 80 ~~p~gi~~~~~~g~l~v~d~~~~-i~~-~d~~~-g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~ 156 (322)
T 2fp8_A 80 GRTYDISYNLQNNQLYIVDCYYH-LSV-VGSEG-GHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQ 156 (322)
T ss_dssp CCEEEEEEETTTTEEEEEETTTE-EEE-ECTTC-EECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHH
T ss_pred CCCceEEEcCCCCcEEEEECCCC-EEE-EeCCC-CEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccce
Confidence 4799999997 899999998754 433 32111 1100000001123578899999999 99999999763
Q ss_pred --------CEEEEEcCC-C-cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCC-eEEEEECCCCeEEEEECCCCc
Q 011014 152 --------MAIRKISDT-G-VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSC-SLLVIDRGNQAIREIQLHDDD 220 (495)
Q Consensus 152 --------~rIrk~d~~-G-V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G-~LyVaD~gN~rI~~~d~~g~~ 220 (495)
++|.+++.+ + +..+.. .+..|++|+ ++++| .|||+|..+++|++|++++..
T Consensus 157 ~~~~~~~~g~v~~~d~~~~~~~~~~~-----------------~~~~p~gia-~~~dg~~lyv~d~~~~~I~~~~~~~~~ 218 (322)
T 2fp8_A 157 IMDTSDKTGRLIKYDPSTKETTLLLK-----------------ELHVPGGAE-VSADSSFVLVAEFLSHQIVKYWLEGPK 218 (322)
T ss_dssp HHHHTCCCEEEEEEETTTTEEEEEEE-----------------EESCCCEEE-ECTTSSEEEEEEGGGTEEEEEESSSTT
T ss_pred ehcccCCCceEEEEeCCCCEEEEecc-----------------CCccCcceE-ECCCCCEEEEEeCCCCeEEEEECCCCc
Confidence 679999975 4 343321 356899999 67776 599999999999999998632
Q ss_pred e----eeCCCCCCcceEEEEecCcCeEEEEEcc
Q 011014 221 C----SDNYDDTFHLGIFVLVAAAFFGYMLALL 249 (495)
Q Consensus 221 ~----~~~~~~g~P~GIAvd~~a~~~~yv~d~~ 249 (495)
. ......| |.||++|. .+++||++..
T Consensus 219 ~~~~~~~~~~~g-P~gi~~d~--~G~l~va~~~ 248 (322)
T 2fp8_A 219 KGTAEVLVKIPN-PGNIKRNA--DGHFWVSSSE 248 (322)
T ss_dssp TTCEEEEEECSS-EEEEEECT--TSCEEEEEEE
T ss_pred CCccceEEeCCC-CCCeEECC--CCCEEEEecC
Confidence 1 1112345 99999997 5689999976
No 37
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=99.35 E-value=3.8e-12 Score=141.74 Aligned_cols=161 Identities=15% Similarity=0.058 Sum_probs=116.0
Q ss_pred CCCceEEEEcC-CCcEEEEECCCCeeEEEEcCCCCccccccCCCcCccccCCcceEEEc-CCCCEEEEECCCCEEEEEcC
Q 011014 82 GMEPFSVAVSP-SGELLVLDSENNSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVD-DRGNIYIADTMNMAIRKISD 159 (495)
Q Consensus 82 ~~~P~GIAVd~-dG~LyVaDs~n~~ii~ivaGs~~g~~G~~dG~~~~a~f~~P~GIAVD-~dGnIYVAD~~N~rIrk~d~ 159 (495)
+..|.+|++++ ++.||++|..++++.++-..... .+..........|..|.||||| ..|+|||+|..+++|.+++.
T Consensus 405 ~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~--~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~ 482 (699)
T 1n7d_A 405 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAH--GVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADT 482 (699)
T ss_dssp CTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCC--C-CCCCCBCCSCC--CCCEECCCSSSBCEECCTTTSCEEEEBS
T ss_pred CcceEEEccccccCeEEEEecCCCeEEEEecCCCC--CCcceEEEEeCCCCCcceEEEEeeCCcEEEEeccCCeEEEEec
Confidence 45799999997 67899999998866655322100 0000111122357789999999 57899999999999999998
Q ss_pred CC--cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECCC-CeEEEEECCCCceee--CCCCCCcceEE
Q 011014 160 TG--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGN-QAIREIQLHDDDCSD--NYDDTFHLGIF 234 (495)
Q Consensus 160 ~G--V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~gN-~rI~~~d~~g~~~~~--~~~~g~P~GIA 234 (495)
+| +.++.. ..+..|.+|++....|.||++|.++ ++|.+++++|..... ......|.|||
T Consensus 483 dg~~~~~l~~----------------~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~~PnGla 546 (699)
T 1n7d_A 483 KGVKRKTLFR----------------EQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGIT 546 (699)
T ss_dssp SSCCEEEECC----------------CSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSCSSCCCEE
T ss_pred CCCceEEEEe----------------CCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCCCCccEEE
Confidence 88 344421 1356899999433578999999886 899999999866433 23456799999
Q ss_pred EEecCcCeEEEEEccCCceEEEeeCCC
Q 011014 235 VLVAAAFFGYMLALLQRRVQAMFSSKD 261 (495)
Q Consensus 235 vd~~a~~~~yv~d~~~~Rv~~~~~s~~ 261 (495)
+|.. +..||+++..+++|..+-.+..
T Consensus 547 vd~~-~~~LY~aD~~~~~I~~~d~dG~ 572 (699)
T 1n7d_A 547 LDLL-SGRLYWVDSKLHSISSIDVNGG 572 (699)
T ss_dssp ECTT-TCCEEEEETTTTEEEEECSSSS
T ss_pred Eecc-CCEEEEEecCCCeEEEEccCCC
Confidence 9952 4689999999999976665543
No 38
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.34 E-value=4e-10 Score=107.35 Aligned_cols=151 Identities=11% Similarity=0.172 Sum_probs=110.8
Q ss_pred CCCceEEEEcCCCcEEEEECCCCeeEEEEcCCCCccccccCCCcCccccCCcceEEEcCCCCEEEEECCCCEEEEEcCCC
Q 011014 82 GMEPFSVAVSPSGELLVLDSENNSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMNMAIRKISDTG 161 (495)
Q Consensus 82 ~~~P~GIAVd~dG~LyVaDs~n~~ii~ivaGs~~g~~G~~dG~~~~a~f~~P~GIAVD~dGnIYVAD~~N~rIrk~d~~G 161 (495)
...|.+|+++++|+|||++..++.+..+ .... ..-... .......|.+|++|++|+|||++..++.|.+++.+|
T Consensus 98 ~~~~~~i~~~~~g~l~v~~~~~~~i~~~-d~~g--~~~~~~---~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g 171 (299)
T 2z2n_A 98 DSAPYGITEGPNGDIWFTEMNGNRIGRI-TDDG--KIREYE---LPNKGSYPSFITLGSDNALWFTENQNNAIGRITESG 171 (299)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEE-CTTC--CEEEEE---CSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTTC
T ss_pred CCCceeeEECCCCCEEEEecCCceEEEE-CCCC--CEEEec---CCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcCCC
Confidence 4579999999999999999877744443 2221 111000 011356899999999999999999999999999877
Q ss_pred -cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCceee--CCCCCCcceEEEEec
Q 011014 162 -VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCSD--NYDDTFHLGIFVLVA 238 (495)
Q Consensus 162 -V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~gN~rI~~~d~~g~~~~~--~~~~g~P~GIAvd~~ 238 (495)
+..+... ..+..|.+|+ ++.+|.|||++..++.|.++++.+..... ......|.+|+++.
T Consensus 172 ~~~~~~~~---------------~~~~~~~~i~-~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~~~- 234 (299)
T 2z2n_A 172 DITEFKIP---------------TPASGPVGIT-KGNDDALWFVEIIGNKIGRITTSGEITEFKIPTPNARPHAITAGA- 234 (299)
T ss_dssp CEEEEECS---------------STTCCEEEEE-ECTTSSEEEEETTTTEEEEECTTCCEEEEECSSTTCCEEEEEECS-
T ss_pred cEEEeeCC---------------CCCCcceeEE-ECCCCCEEEEccCCceEEEECCCCcEEEEECCCCCCCceeEEECC-
Confidence 4433211 1245788998 68889999999999999999996654433 22335699999996
Q ss_pred CcCeEEEEEccCCceEEE
Q 011014 239 AAFFGYMLALLQRRVQAM 256 (495)
Q Consensus 239 a~~~~yv~d~~~~Rv~~~ 256 (495)
.+.+|+++..+++|..+
T Consensus 235 -~g~l~v~~~~~~~i~~~ 251 (299)
T 2z2n_A 235 -GIDLWFTEWGANKIGRL 251 (299)
T ss_dssp -TTCEEEEETTTTEEEEE
T ss_pred -CCCEEEeccCCceEEEE
Confidence 56799999888999544
No 39
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.34 E-value=1.2e-11 Score=122.62 Aligned_cols=164 Identities=10% Similarity=0.099 Sum_probs=113.0
Q ss_pred CCCceEEEEcCCCcEEEEECCCCeeEEEEcCCC-Cccccc---------cCCC---cCccccCCcceEEEcC-CCCEEEE
Q 011014 82 GMEPFSVAVSPSGELLVLDSENNSRPKLVAGSP-EGYYGH---------VDGR---PRGARMNHPKGLAVDD-RGNIYIA 147 (495)
Q Consensus 82 ~~~P~GIAVd~dG~LyVaDs~n~~ii~ivaGs~-~g~~G~---------~dG~---~~~a~f~~P~GIAVD~-dGnIYVA 147 (495)
+..|.+|++|++|++|++|..++++.++-..+. ...... .+|. .....+..|.||++|+ +|+|||+
T Consensus 18 ~~~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~ 97 (322)
T 2fp8_A 18 SYAPNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIV 97 (322)
T ss_dssp SSCCCCEECCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEE
T ss_pred cCCceEEEEcCCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEE
Confidence 357999999999996667777775555422211 111110 0010 0112456899999997 8999999
Q ss_pred ECCCCEEEEEcCCC--cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECC-CCeEEEEECCC----------------
Q 011014 148 DTMNMAIRKISDTG--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGS-SCSLLVIDRGN---------------- 208 (495)
Q Consensus 148 D~~N~rIrk~d~~G--V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~-~G~LyVaD~gN---------------- 208 (495)
|.. +.|++++.++ +.+++.... ...+..|++|+ ++. +|+|||+|..+
T Consensus 98 d~~-~~i~~~d~~~g~~~~~~~~~~------------~~~~~~p~~i~-~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~ 163 (322)
T 2fp8_A 98 DCY-YHLSVVGSEGGHATQLATSVD------------GVPFKWLYAVT-VDQRTGIVYFTDVSTLYDDRGVQQIMDTSDK 163 (322)
T ss_dssp ETT-TEEEEECTTCEECEEEESEET------------TEECSCEEEEE-ECTTTCCEEEEESCSSCCTTCHHHHHHHTCC
T ss_pred ECC-CCEEEEeCCCCEEEEecccCC------------CCcccccceEE-EecCCCEEEEECCcccccccccceehcccCC
Confidence 986 5699999774 566643211 13577899999 688 99999999763
Q ss_pred -CeEEEEECCCCceee-CCCCCCcceEEEEecCcCeEEEEEccCCceEEEeeCC
Q 011014 209 -QAIREIQLHDDDCSD-NYDDTFHLGIFVLVAAAFFGYMLALLQRRVQAMFSSK 260 (495)
Q Consensus 209 -~rI~~~d~~g~~~~~-~~~~g~P~GIAvd~~a~~~~yv~d~~~~Rv~~~~~s~ 260 (495)
++|.++++++..+.. ......|.||+++.. +..+||++..++||..+....
T Consensus 164 ~g~v~~~d~~~~~~~~~~~~~~~p~gia~~~d-g~~lyv~d~~~~~I~~~~~~~ 216 (322)
T 2fp8_A 164 TGRLIKYDPSTKETTLLLKELHVPGGAEVSAD-SSFVLVAEFLSHQIVKYWLEG 216 (322)
T ss_dssp CEEEEEEETTTTEEEEEEEEESCCCEEEECTT-SSEEEEEEGGGTEEEEEESSS
T ss_pred CceEEEEeCCCCEEEEeccCCccCcceEECCC-CCEEEEEeCCCCeEEEEECCC
Confidence 689999998665443 334457999999962 346999999999997665543
No 40
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.33 E-value=5.4e-10 Score=106.45 Aligned_cols=150 Identities=13% Similarity=0.185 Sum_probs=108.6
Q ss_pred CCCceEEEEcCCCcEEEEECCCCeeEEEEcCCCCccccccCCCcCccccCCcceEEEcCCCCEEEEECCCCEEEEEcCCC
Q 011014 82 GMEPFSVAVSPSGELLVLDSENNSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMNMAIRKISDTG 161 (495)
Q Consensus 82 ~~~P~GIAVd~dG~LyVaDs~n~~ii~ivaGs~~g~~G~~dG~~~~a~f~~P~GIAVD~dGnIYVAD~~N~rIrk~d~~G 161 (495)
+..|.+|+++++|+|||++..++.+..+-. + +..-... ....+..|.+|++|++|+|||++..+++|.+++.+|
T Consensus 140 ~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~--g~~~~~~---~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g 213 (299)
T 2z2n_A 140 GSYPSFITLGSDNALWFTENQNNAIGRITE-S--GDITEFK---IPTPASGPVGITKGNDDALWFVEIIGNKIGRITTSG 213 (299)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECT-T--CCEEEEE---CSSTTCCEEEEEECTTSSEEEEETTTTEEEEECTTC
T ss_pred CCCCceEEEcCCCCEEEEeCCCCEEEEEcC-C--CcEEEee---CCCCCCcceeEEECCCCCEEEEccCCceEEEECCCC
Confidence 457999999999999999987774444422 2 1111100 112456899999999999999999999999999877
Q ss_pred -cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCceee--CCCCCCcceEEEEec
Q 011014 162 -VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCSD--NYDDTFHLGIFVLVA 238 (495)
Q Consensus 162 -V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~gN~rI~~~d~~g~~~~~--~~~~g~P~GIAvd~~ 238 (495)
+..+... ..+..|.+|+ ++.+|+|||++..+++|.++++++..... ......|.++++ .
T Consensus 214 ~~~~~~~~---------------~~~~~~~~i~-~~~~g~l~v~~~~~~~i~~~d~~g~~~~~~~~~~~~~~~~i~~-~- 275 (299)
T 2z2n_A 214 EITEFKIP---------------TPNARPHAIT-AGAGIDLWFTEWGANKIGRLTSNNIIEEYPIQIKSAEPHGICF-D- 275 (299)
T ss_dssp CEEEEECS---------------STTCCEEEEE-ECSTTCEEEEETTTTEEEEEETTTEEEEEECSSSSCCEEEEEE-C-
T ss_pred cEEEEECC---------------CCCCCceeEE-ECCCCCEEEeccCCceEEEECCCCceEEEeCCCCCCccceEEe-c-
Confidence 4333110 1245789998 68899999999999999999997654333 223346999999 4
Q ss_pred CcCeEEEEEccCCceEEEe
Q 011014 239 AAFFGYMLALLQRRVQAMF 257 (495)
Q Consensus 239 a~~~~yv~d~~~~Rv~~~~ 257 (495)
.+.+|+++. .+++..+.
T Consensus 276 -~g~l~v~~~-~~~l~~~~ 292 (299)
T 2z2n_A 276 -GETIWFAME-CDKIGKLT 292 (299)
T ss_dssp -SSCEEEEET-TTEEEEEE
T ss_pred -CCCEEEEec-CCcEEEEE
Confidence 678999987 56775443
No 41
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=99.32 E-value=3e-10 Score=112.20 Aligned_cols=156 Identities=13% Similarity=-0.007 Sum_probs=105.7
Q ss_pred CCceEEEEcCCCcEEEEECCCCe--eEEEEcCCCC-ccccccCCCcCccccCCcceEEEcCCCCEEEEECCCCEEEEEcC
Q 011014 83 MEPFSVAVSPSGELLVLDSENNS--RPKLVAGSPE-GYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMNMAIRKISD 159 (495)
Q Consensus 83 ~~P~GIAVd~dG~LyVaDs~n~~--ii~ivaGs~~-g~~G~~dG~~~~a~f~~P~GIAVD~dGnIYVAD~~N~rIrk~d~ 159 (495)
..|.+|+++++|+|||+|..+++ +..+...+.. ...... .....|.|++++.++++||+|..+++|++++.
T Consensus 72 ~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~~~~~------~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~ 145 (306)
T 2p4o_A 72 GKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVETLLTL------PDAIFLNGITPLSDTQYLTADSYRGAIWLIDV 145 (306)
T ss_dssp SEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEEEEEC------TTCSCEEEEEESSSSEEEEEETTTTEEEEEET
T ss_pred CCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEEEEeC------CCccccCcccccCCCcEEEEECCCCeEEEEeC
Confidence 37999999999999999976543 4444322211 111110 12456789999888889999999999999997
Q ss_pred CC----cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCC-ce---eeCCCCCCcc
Q 011014 160 TG----VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDD-DC---SDNYDDTFHL 231 (495)
Q Consensus 160 ~G----V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~gN~rI~~~d~~g~-~~---~~~~~~g~P~ 231 (495)
++ +....+. .. .. .....|..|++|. .+.+.|||+|..+++|++|+.++. .. ........|.
T Consensus 146 ~~~~~~v~~~~~~--~~-~~-----~~~~~~~~pngis--~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~~~~P~ 215 (306)
T 2p4o_A 146 VQPSGSIWLEHPM--LA-RS-----NSESVFPAANGLK--RFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQTNID 215 (306)
T ss_dssp TTTEEEEEEECGG--GS-CS-----STTCCSCSEEEEE--EETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEESCCCS
T ss_pred CCCcEeEEEECCc--cc-cc-----cccCCCCcCCCcC--cCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEeccCCCC
Confidence 64 2222111 00 00 1123577899983 345689999999999999998852 11 1111235799
Q ss_pred eEEEEecCcCeEEEEEccCCceEEE
Q 011014 232 GIFVLVAAAFFGYMLALLQRRVQAM 256 (495)
Q Consensus 232 GIAvd~~a~~~~yv~d~~~~Rv~~~ 256 (495)
||++|. .+++||++..+++|..+
T Consensus 216 gi~vd~--dG~l~va~~~~~~V~~~ 238 (306)
T 2p4o_A 216 DFAFDV--EGNLYGATHIYNSVVRI 238 (306)
T ss_dssp SEEEBT--TCCEEEECBTTCCEEEE
T ss_pred CeEECC--CCCEEEEeCCCCeEEEE
Confidence 999997 56899999999999554
No 42
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=99.29 E-value=2e-10 Score=113.48 Aligned_cols=151 Identities=15% Similarity=0.050 Sum_probs=105.2
Q ss_pred CCceEEEEcCCCcEEEEECCCCeeEEEEcCCCCccccccCCCcCccccCCcceEEEcCCCCEEEEECCCC--EEEEEc-C
Q 011014 83 MEPFSVAVSPSGELLVLDSENNSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMNM--AIRKIS-D 159 (495)
Q Consensus 83 ~~P~GIAVd~dG~LyVaDs~n~~ii~ivaGs~~g~~G~~dG~~~~a~f~~P~GIAVD~dGnIYVAD~~N~--rIrk~d-~ 159 (495)
..|.+|+++++|+|||+|..++++.++ .... ....... .-..|.||++|++|+|||||..++ +|.+++ .
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~-d~~g-~~~~~~~------~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~ 103 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSI-TPDG-NQQIHAT------VEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKS 103 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEE-CTTC-CEEEEEE------CSSEEEEEEECTTSCEEEEEECTTSCEEEEEECT
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEE-CCCC-ceEEEEe------CCCCceeEEEcCCCcEEEEeccCCcceEEEEcCC
Confidence 479999999999999999988855444 3211 1100000 013699999999999999997754 588887 5
Q ss_pred CC-cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCc--ee---------e-CCC
Q 011014 160 TG-VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDD--CS---------D-NYD 226 (495)
Q Consensus 160 ~G-V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~gN~rI~~~d~~g~~--~~---------~-~~~ 226 (495)
+| +..++... ....|.+++ +..++.+||+|..+++|+++++++.. +. . ...
T Consensus 104 ~g~~~~~~~~~---------------~~~~~~g~~-~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~ 167 (306)
T 2p4o_A 104 DGTVETLLTLP---------------DAIFLNGIT-PLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESV 167 (306)
T ss_dssp TSCEEEEEECT---------------TCSCEEEEE-ESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCC
T ss_pred CCeEEEEEeCC---------------CccccCccc-ccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCC
Confidence 66 55554321 123467777 57788999999999999999987642 21 0 122
Q ss_pred CCCcceEEEEecCcCeEEEEEccCCceEEEeeCC
Q 011014 227 DTFHLGIFVLVAAAFFGYMLALLQRRVQAMFSSK 260 (495)
Q Consensus 227 ~g~P~GIAvd~~a~~~~yv~d~~~~Rv~~~~~s~ 260 (495)
...|.||..| +..+|+++..+++|..+-.+.
T Consensus 168 ~~~pngis~d---g~~lyv~d~~~~~I~~~~~~~ 198 (306)
T 2p4o_A 168 FPAANGLKRF---GNFLYVSNTEKMLLLRIPVDS 198 (306)
T ss_dssp SCSEEEEEEE---TTEEEEEETTTTEEEEEEBCT
T ss_pred CCcCCCcCcC---CCEEEEEeCCCCEEEEEEeCC
Confidence 3368999544 568999999999997665544
No 43
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.19 E-value=8.5e-10 Score=106.93 Aligned_cols=148 Identities=14% Similarity=0.127 Sum_probs=104.3
Q ss_pred CCceEEEEcCCCcEEEEECCCCeeEEEEcCCCCccccccCCCcCccccCCcceEEEcCCCCEEEEEC-------------
Q 011014 83 MEPFSVAVSPSGELLVLDSENNSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADT------------- 149 (495)
Q Consensus 83 ~~P~GIAVd~dG~LyVaDs~n~~ii~ivaGs~~g~~G~~dG~~~~a~f~~P~GIAVD~dGnIYVAD~------------- 149 (495)
..|.+|+++++|+|||++..++++..+-..+..-.. . ........++.|.+|++|++|+|||+|.
T Consensus 69 ~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~-~-~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~ 146 (296)
T 3e5z_A 69 HHQNGHCLNKQGHLIACSHGLRRLERQREPGGEWES-I-ADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGG 146 (296)
T ss_dssp SSEEEEEECTTCCEEEEETTTTEEEEECSTTCCEEE-E-ECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCC
T ss_pred CCcceeeECCCCcEEEEecCCCeEEEEcCCCCcEEE-E-eeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccc
Confidence 469999999999999999887744443221211100 0 0001123567899999999999999986
Q ss_pred ----CCCEEEEEcCCC-cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECCCCeEEEEECC--CCc--
Q 011014 150 ----MNMAIRKISDTG-VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLH--DDD-- 220 (495)
Q Consensus 150 ----~N~rIrk~d~~G-V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~gN~rI~~~d~~--g~~-- 220 (495)
..++|.+++.+| +..+.. .+..|.+|+ ++++|.++|+|..+++|++++++ |..
T Consensus 147 ~~~~~~~~l~~~~~~g~~~~~~~-----------------~~~~~~gi~-~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~ 208 (296)
T 3e5z_A 147 EMELPGRWVFRLAPDGTLSAPIR-----------------DRVKPNGLA-FLPSGNLLVSDTGDNATHRYCLNARGETEY 208 (296)
T ss_dssp CCCSSSCEEEEECTTSCEEEEEC-----------------CCSSEEEEE-ECTTSCEEEEETTTTEEEEEEECSSSCEEE
T ss_pred cccCCCcEEEEECCCCCEEEeec-----------------CCCCCccEE-ECCCCCEEEEeCCCCeEEEEEECCCCcCcC
Confidence 246899999877 444422 245788998 68888877999999999999985 332
Q ss_pred -e-eeCCCCCCcceEEEEecCcCeEEEEEccCCceE
Q 011014 221 -C-SDNYDDTFHLGIFVLVAAAFFGYMLALLQRRVQ 254 (495)
Q Consensus 221 -~-~~~~~~g~P~GIAvd~~a~~~~yv~d~~~~Rv~ 254 (495)
. ......+.|.+|++|. .+++||+. +++|.
T Consensus 209 ~~~~~~~~~~~p~~i~~d~--~G~l~v~~--~~~v~ 240 (296)
T 3e5z_A 209 QGVHFTVEPGKTDGLRVDA--GGLIWASA--GDGVH 240 (296)
T ss_dssp EEEEECCSSSCCCSEEEBT--TSCEEEEE--TTEEE
T ss_pred CCeEeeCCCCCCCeEEECC--CCCEEEEc--CCeEE
Confidence 1 1123456799999997 66899999 77884
No 44
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=99.16 E-value=1.5e-09 Score=110.59 Aligned_cols=171 Identities=12% Similarity=0.062 Sum_probs=103.5
Q ss_pred CCceEEEEcCC----CcEEEEECCC-----CeeEEEEcCCC-Cccc-cccCCCc-CccccCCcceEEEcCCCCEEEEECC
Q 011014 83 MEPFSVAVSPS----GELLVLDSEN-----NSRPKLVAGSP-EGYY-GHVDGRP-RGARMNHPKGLAVDDRGNIYIADTM 150 (495)
Q Consensus 83 ~~P~GIAVd~d----G~LyVaDs~n-----~~ii~ivaGs~-~g~~-G~~dG~~-~~a~f~~P~GIAVD~dGnIYVAD~~ 150 (495)
..|.||+++++ |.|||++..+ +++.++-.... .... -...+.. .......|.+|+++++|+|||++..
T Consensus 75 ~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~ 154 (352)
T 2ism_A 75 SGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGE 154 (352)
T ss_dssp CSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCC
T ss_pred CCceeEEECCCCCCCCEEEEEEecCCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECC
Confidence 57999999997 8999999854 43444322111 0000 0000000 0124567899999999999999742
Q ss_pred -------------CCEEEEEcCCCcEEEecCcccCCCCCCCCC---CcCcccCCCceEEEECC-CCeEEEEECCCCe---
Q 011014 151 -------------NMAIRKISDTGVTTIAGGKWSRGVGHVDGP---SEDAKFSNDFDVVYVGS-SCSLLVIDRGNQA--- 210 (495)
Q Consensus 151 -------------N~rIrk~d~~GV~tiaGg~~G~~~g~~dG~---~~~a~f~~P~gVa~vd~-~G~LyVaD~gN~r--- 210 (495)
.++|.+|+.+|. ...+.. .....+. .-..-+.+|.+++ +++ +|.|||+|.++++
T Consensus 155 ~~~~~~~~d~~~~~g~I~ri~~dG~-~p~~np----f~~~~~~~~~i~a~G~rnp~g~a-~d~~~g~l~v~d~g~~~~~~ 228 (352)
T 2ism_A 155 VYERELAQDLASLGGKILRLTPEGE-PAPGNP----FLGRRGARPEVYSLGHRNPQGLA-WHPKTGELFSSEHGPSGEQG 228 (352)
T ss_dssp TTCGGGGGCTTCSSSEEEEECTTSS-BCTTCT----TTTCTTSCTTEEEECCSEECCCE-ECTTTCCEEEEEECC-----
T ss_pred CCCCccccCCCCCceEEEEEcCCCC-CCCCCc----ccCCCCCCccEEEEcCCCcccEE-EECCCCCEEEEEcCCCCCCC
Confidence 368999998871 000100 0000000 0111257899999 566 8999999998887
Q ss_pred -----EEEEECCCCc----e-------------eeCCCCCCcceEEEEecCcCeEEEEEccCCceEEEeeCCCC
Q 011014 211 -----IREIQLHDDD----C-------------SDNYDDTFHLGIFVLVAAAFFGYMLALLQRRVQAMFSSKDD 262 (495)
Q Consensus 211 -----I~~~d~~g~~----~-------------~~~~~~g~P~GIAvd~~a~~~~yv~d~~~~Rv~~~~~s~~~ 262 (495)
|..+...++. | ........|.|+++. .+.+|+++...+||..+-++...
T Consensus 229 ~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~ap~G~~~~---~G~l~v~~~~~~~v~~v~~~~~~ 299 (352)
T 2ism_A 229 YGHDEVNLIVPGGNYGWPRVVGRGNDPRYRDPLYFWPQGFPPGNLAFF---RGDLYVAGLRGQALLRLVLEGER 299 (352)
T ss_dssp -CCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECTTCCCEEEEEEE---TTEEEEEETTTTEEEEEEEEEET
T ss_pred CCCeEEEEeccCCcCCCCcccCCCCCCCCcCCeEecCCCCCCcceEEE---CCEEEEEECCCCEEEEEEECCCC
Confidence 7777654311 0 011122358999995 56899999999999777666543
No 45
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.15 E-value=1.6e-09 Score=105.06 Aligned_cols=154 Identities=12% Similarity=0.028 Sum_probs=111.3
Q ss_pred CCceEEEEcCCCc-EEEEECCCCeeEEEEcCCCCccccccCCCcCccccCCcceEEEcCCCCEEEEECCCCEEEEEcC-C
Q 011014 83 MEPFSVAVSPSGE-LLVLDSENNSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMNMAIRKISD-T 160 (495)
Q Consensus 83 ~~P~GIAVd~dG~-LyVaDs~n~~ii~ivaGs~~g~~G~~dG~~~~a~f~~P~GIAVD~dGnIYVAD~~N~rIrk~d~-~ 160 (495)
..|.|++++++|+ ||++|..+.++..+-..+...... .....|.+|++|++|+|||++..+++|.+++. +
T Consensus 28 ~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~~~~~~--------~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~ 99 (296)
T 3e5z_A 28 TWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQLSPEM--------HPSHHQNGHCLNKQGHLIACSHGLRRLERQREPG 99 (296)
T ss_dssp SSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSCEEEEE--------SSCSSEEEEEECTTCCEEEEETTTTEEEEECSTT
T ss_pred ccccCCeEeCCCCEEEEEeCCCCEEEEEECCCCeEEEE--------CCCCCcceeeECCCCcEEEEecCCCeEEEEcCCC
Confidence 4699999999998 999998887554443322111111 12346899999999999999999999999996 6
Q ss_pred C-cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEEC-----------------CCCeEEEEECCCCcee
Q 011014 161 G-VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDR-----------------GNQAIREIQLHDDDCS 222 (495)
Q Consensus 161 G-V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~-----------------gN~rI~~~d~~g~~~~ 222 (495)
| +..+..... ...+..|.+|+ ++++|+|||+|. .+++|.++++++....
T Consensus 100 g~~~~~~~~~~------------~~~~~~~~~i~-~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~ 166 (296)
T 3e5z_A 100 GEWESIADSFE------------GKKLNSPNDVC-LAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPDGTLSA 166 (296)
T ss_dssp CCEEEEECEET------------TEECCCCCCEE-ECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTTSCEEE
T ss_pred CcEEEEeeccC------------CCCCCCCCCEE-ECCCCCEEEECCccccccccccccccccCCCcEEEEECCCCCEEE
Confidence 7 444432111 12466899999 789999999985 2469999999866554
Q ss_pred eCCCCCCcceEEEEecCcCeEEEEEccCCceEEEeeC
Q 011014 223 DNYDDTFHLGIFVLVAAAFFGYMLALLQRRVQAMFSS 259 (495)
Q Consensus 223 ~~~~~g~P~GIAvd~~a~~~~yv~d~~~~Rv~~~~~s 259 (495)
.......|.||+++. .+.+++++...++|..+-..
T Consensus 167 ~~~~~~~~~gi~~s~--dg~~lv~~~~~~~i~~~~~~ 201 (296)
T 3e5z_A 167 PIRDRVKPNGLAFLP--SGNLLVSDTGDNATHRYCLN 201 (296)
T ss_dssp EECCCSSEEEEEECT--TSCEEEEETTTTEEEEEEEC
T ss_pred eecCCCCCccEEECC--CCCEEEEeCCCCeEEEEEEC
Confidence 455667899999986 33334999999999655443
No 46
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.10 E-value=2.9e-09 Score=104.33 Aligned_cols=149 Identities=13% Similarity=0.051 Sum_probs=102.1
Q ss_pred CCceEEEEcCCCcEEEEECCCCeeEEEEcCCCC-ccccccCCCcCccccCCcceEEEcCCCCEEEEECC-----------
Q 011014 83 MEPFSVAVSPSGELLVLDSENNSRPKLVAGSPE-GYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTM----------- 150 (495)
Q Consensus 83 ~~P~GIAVd~dG~LyVaDs~n~~ii~ivaGs~~-g~~G~~dG~~~~a~f~~P~GIAVD~dGnIYVAD~~----------- 150 (495)
..|.+|+++++|+|||+. ++++..+-..+.. ....... ....++.|.+|++|++|+|||++..
T Consensus 54 ~~~~~i~~~~dG~l~v~~--~~~l~~~d~~~g~~~~~~~~~---~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~ 128 (297)
T 3g4e_A 54 APVSSVALRQSGGYVATI--GTKFCALNWKEQSAVVLATVD---NDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERH 128 (297)
T ss_dssp SCEEEEEEBTTSSEEEEE--TTEEEEEETTTTEEEEEEECC---TTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTT
T ss_pred CceEEEEECCCCCEEEEE--CCeEEEEECCCCcEEEEEecC---CCCCCCCCCCEEECCCCCEEEecCCcccccccccCC
Confidence 368999999999999997 3434433322211 1111100 1123567899999999999999843
Q ss_pred CCEEEEEcCCC-cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCC-eEEEEECCCCeEEEEECC--CCcee----
Q 011014 151 NMAIRKISDTG-VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSC-SLLVIDRGNQAIREIQLH--DDDCS---- 222 (495)
Q Consensus 151 N~rIrk~d~~G-V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G-~LyVaD~gN~rI~~~d~~--g~~~~---- 222 (495)
..+|.+++.+| +..+.. .+..|++++ +++++ .|||+|..+++|++++.+ +..+.
T Consensus 129 ~~~l~~~d~~g~~~~~~~-----------------~~~~pngi~-~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~ 190 (297)
T 3g4e_A 129 QGALYSLFPDHHVKKYFD-----------------QVDISNGLD-WSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRS 190 (297)
T ss_dssp CEEEEEECTTSCEEEEEE-----------------EESBEEEEE-ECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEE
T ss_pred CcEEEEEECCCCEEEEee-----------------ccccccceE-EcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEE
Confidence 45899999877 444321 245789999 46665 699999999999999864 22221
Q ss_pred --e-CCCCCCcceEEEEecCcCeEEEEEccCCceEEE
Q 011014 223 --D-NYDDTFHLGIFVLVAAAFFGYMLALLQRRVQAM 256 (495)
Q Consensus 223 --~-~~~~g~P~GIAvd~~a~~~~yv~d~~~~Rv~~~ 256 (495)
. ....+.|.|+++|. .+++||+....++|..+
T Consensus 191 ~~~~~~~~~~p~g~~~d~--~G~lwva~~~~~~v~~~ 225 (297)
T 3g4e_A 191 VYKLEKEEQIPDGMCIDA--EGKLWVACYNGGRVIRL 225 (297)
T ss_dssp EEECCGGGCEEEEEEEBT--TSCEEEEEETTTEEEEE
T ss_pred EEECCCCCCCCCeeEECC--CCCEEEEEcCCCEEEEE
Confidence 1 22346899999997 56899999999998443
No 47
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.08 E-value=4.1e-09 Score=103.44 Aligned_cols=153 Identities=12% Similarity=0.024 Sum_probs=109.1
Q ss_pred CCceEEEEcCCCc-EEEEECCCCeeEEEEcCCCCccccccCCCcCccccCCcceEEEcCCCCEEEEECCCCEEEEEcCCC
Q 011014 83 MEPFSVAVSPSGE-LLVLDSENNSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMNMAIRKISDTG 161 (495)
Q Consensus 83 ~~P~GIAVd~dG~-LyVaDs~n~~ii~ivaGs~~g~~G~~dG~~~~a~f~~P~GIAVD~dGnIYVAD~~N~rIrk~d~~G 161 (495)
..+.|++++++|+ ||++|..++++.++-. ... ..-. ...-..|.|+++|++|+|||++..+++|.+++.+|
T Consensus 45 ~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~-~~~~------~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~g 116 (305)
T 3dr2_A 45 TWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGT-VDVL------LDATAFTNGNAVDAQQRLVHCEHGRRAITRSDADG 116 (305)
T ss_dssp SSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSC-EEEE------EESCSCEEEEEECTTSCEEEEETTTTEEEEECTTS
T ss_pred cCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCC-EEEE------eCCCCccceeeECCCCCEEEEECCCCEEEEECCCC
Confidence 3688999999988 9999998885555532 211 1000 01124689999999999999999999999999888
Q ss_pred -cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEEC-----------------CCCeEEEEECCCCce-e
Q 011014 162 -VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDR-----------------GNQAIREIQLHDDDC-S 222 (495)
Q Consensus 162 -V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~-----------------gN~rI~~~d~~g~~~-~ 222 (495)
+.+++.... ...++.|++|+ ++++|+|||+|. ..+.|.++++++..+ .
T Consensus 117 ~~~~~~~~~~------------~~~~~~~~~i~-~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~ 183 (305)
T 3dr2_A 117 QAHLLVGRYA------------GKRLNSPNDLI-VARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQR 183 (305)
T ss_dssp CEEEEECEET------------TEECSCCCCEE-ECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEE
T ss_pred CEEEEEeccC------------CCccCCCCCEE-ECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEE
Confidence 555543211 13467899999 799999999984 246899999864433 3
Q ss_pred eCCCCCCcceEEEEecCcCeEEEEEccC-----CceEEEee
Q 011014 223 DNYDDTFHLGIFVLVAAAFFGYMLALLQ-----RRVQAMFS 258 (495)
Q Consensus 223 ~~~~~g~P~GIAvd~~a~~~~yv~d~~~-----~Rv~~~~~ 258 (495)
.. ....|.|++++.. +..+|+++... ++|..+-.
T Consensus 184 ~~-~~~~p~gl~~spd-g~~lyv~~~~~~~~~~~~i~~~~~ 222 (305)
T 3dr2_A 184 MA-DLDHPNGLAFSPD-EQTLYVSQTPEQGHGSVEITAFAW 222 (305)
T ss_dssp EE-EESSEEEEEECTT-SSEEEEEECCC---CCCEEEEEEE
T ss_pred Ee-cCCCCcceEEcCC-CCEEEEEecCCcCCCCCEEEEEEe
Confidence 33 5557999999862 44689999873 77754433
No 48
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.06 E-value=6.8e-09 Score=101.68 Aligned_cols=146 Identities=8% Similarity=-0.023 Sum_probs=100.4
Q ss_pred CCCceEEEEcCCCcEEEEECCCC----------eeEEEEcCCCCccccccCCCcCccccCCcceEEEcCCCC-EEEEECC
Q 011014 82 GMEPFSVAVSPSGELLVLDSENN----------SRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGN-IYIADTM 150 (495)
Q Consensus 82 ~~~P~GIAVd~dG~LyVaDs~n~----------~ii~ivaGs~~g~~G~~dG~~~~a~f~~P~GIAVD~dGn-IYVAD~~ 150 (495)
...|.+|++|++|+|||++.... ..+..+... +... .....+..|.||+++++|+ |||+|+.
T Consensus 97 ~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~--g~~~-----~~~~~~~~pngi~~spdg~~lyv~~~~ 169 (297)
T 3g4e_A 97 NNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPD--HHVK-----KYFDQVDISNGLDWSLDHKIFYYIDSL 169 (297)
T ss_dssp SEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTT--SCEE-----EEEEEESBEEEEEECTTSCEEEEEEGG
T ss_pred CCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECC--CCEE-----EEeeccccccceEEcCCCCEEEEecCC
Confidence 35689999999999999985322 123333211 1100 0122467899999999996 9999999
Q ss_pred CCEEEEEc---CCC-cE---EEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECCCCeEEEEECC-CCcee
Q 011014 151 NMAIRKIS---DTG-VT---TIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLH-DDDCS 222 (495)
Q Consensus 151 N~rIrk~d---~~G-V~---tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~gN~rI~~~d~~-g~~~~ 222 (495)
+++|++|+ .+| +. .++... .....|.+++ +|.+|+|||++.++++|.+|+++ |....
T Consensus 170 ~~~i~~~~~d~~~G~~~~~~~~~~~~--------------~~~~~p~g~~-~d~~G~lwva~~~~~~v~~~d~~tG~~~~ 234 (297)
T 3g4e_A 170 SYSVDAFDYDLQTGQISNRRSVYKLE--------------KEEQIPDGMC-IDAEGKLWVACYNGGRVIRLDPVTGKRLQ 234 (297)
T ss_dssp GTEEEEEEECTTTCCEEEEEEEEECC--------------GGGCEEEEEE-EBTTSCEEEEEETTTEEEEECTTTCCEEE
T ss_pred CCcEEEEeccCCCCcccCcEEEEECC--------------CCCCCCCeeE-ECCCCCEEEEEcCCCEEEEEcCCCceEEE
Confidence 99999997 345 21 121100 0123688998 79999999999999999999998 66554
Q ss_pred eCCCC-CCcceEEEEecCcCeEEEEEcc
Q 011014 223 DNYDD-TFHLGIFVLVAAAFFGYMLALL 249 (495)
Q Consensus 223 ~~~~~-g~P~GIAvd~~a~~~~yv~d~~ 249 (495)
..... ..|..+++.......+||+...
T Consensus 235 ~i~~p~~~~t~~~f~g~d~~~L~vt~~~ 262 (297)
T 3g4e_A 235 TVKLPVDKTTSCCFGGKNYSEMYVTCAR 262 (297)
T ss_dssp EEECSSSBEEEEEEESGGGCEEEEEEBC
T ss_pred EEECCCCCceEEEEeCCCCCEEEEEcCC
Confidence 43333 4688999874345689998864
No 49
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.06 E-value=3.3e-09 Score=104.14 Aligned_cols=151 Identities=17% Similarity=0.194 Sum_probs=104.2
Q ss_pred CCceEEEEcCCCcEEEEECCCCeeEEEEc-CCCCccccccCCCcCccccCCcceEEEcCCCCEEEEEC------------
Q 011014 83 MEPFSVAVSPSGELLVLDSENNSRPKLVA-GSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADT------------ 149 (495)
Q Consensus 83 ~~P~GIAVd~dG~LyVaDs~n~~ii~iva-Gs~~g~~G~~dG~~~~a~f~~P~GIAVD~dGnIYVAD~------------ 149 (495)
..|.++++|++|+|||++..++++..+-. |........ .....++.|.+|++|++|+|||+|.
T Consensus 86 ~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~g~~~~~~~~----~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~ 161 (305)
T 3dr2_A 86 AFTNGNAVDAQQRLVHCEHGRRAITRSDADGQAHLLVGR----YAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCP 161 (305)
T ss_dssp SCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEEEECE----ETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCC
T ss_pred CccceeeECCCCCEEEEECCCCEEEEECCCCCEEEEEec----cCCCccCCCCCEEECCCCCEEEeCcCCCccccccccc
Confidence 46999999999999999988774444322 221000011 1123578899999999999999984
Q ss_pred -----CCCEEEEEcC-CC-cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCC-eEEEEECCC-----CeEEEEEC
Q 011014 150 -----MNMAIRKISD-TG-VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSC-SLLVIDRGN-----QAIREIQL 216 (495)
Q Consensus 150 -----~N~rIrk~d~-~G-V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G-~LyVaD~gN-----~rI~~~d~ 216 (495)
..+.|.+++. +| +..+. .+..|++++ ++.++ .|||+|..+ ++|++++.
T Consensus 162 ~~~~~~~~~v~~~d~~~g~~~~~~------------------~~~~p~gl~-~spdg~~lyv~~~~~~~~~~~~i~~~~~ 222 (305)
T 3dr2_A 162 ADPELAHHSVYRLPPDGSPLQRMA------------------DLDHPNGLA-FSPDEQTLYVSQTPEQGHGSVEITAFAW 222 (305)
T ss_dssp CCCSSSCEEEEEECSSSCCCEEEE------------------EESSEEEEE-ECTTSSEEEEEECCC---CCCEEEEEEE
T ss_pred cccccCCCeEEEEcCCCCcEEEEe------------------cCCCCcceE-EcCCCCEEEEEecCCcCCCCCEEEEEEe
Confidence 1367999996 45 54442 134688999 56666 599999974 89999998
Q ss_pred CCCcee-----eCCCCCCcceEEEEecCcCeEEEEEccCCceEEEeeCCCC
Q 011014 217 HDDDCS-----DNYDDTFHLGIFVLVAAAFFGYMLALLQRRVQAMFSSKDD 262 (495)
Q Consensus 217 ~g~~~~-----~~~~~g~P~GIAvd~~a~~~~yv~d~~~~Rv~~~~~s~~~ 262 (495)
++..+. .....+.|.||++|. .+++|++. ..+| ..++.++
T Consensus 223 ~~~~l~~~~~~~~~~~~~pdgi~~d~--~G~lwv~~--~~gv--~~~~~~g 267 (305)
T 3dr2_A 223 RDGALHDRRHFASVPDGLPDGFCVDR--GGWLWSSS--GTGV--CVFDSDG 267 (305)
T ss_dssp ETTEEEEEEEEECCSSSCCCSEEECT--TSCEEECC--SSEE--EEECTTS
T ss_pred cCCCccCCeEEEECCCCCCCeEEECC--CCCEEEec--CCcE--EEECCCC
Confidence 764321 123456899999997 66799988 4566 4455443
No 50
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.05 E-value=3.8e-09 Score=101.92 Aligned_cols=150 Identities=12% Similarity=0.098 Sum_probs=103.5
Q ss_pred CCceEEEEcCC-CcEEEEECCCCeeEEEEcCCCCcccccc-CCCcCccccCCcceEEEcCCCCEEEEECCC---------
Q 011014 83 MEPFSVAVSPS-GELLVLDSENNSRPKLVAGSPEGYYGHV-DGRPRGARMNHPKGLAVDDRGNIYIADTMN--------- 151 (495)
Q Consensus 83 ~~P~GIAVd~d-G~LyVaDs~n~~ii~ivaGs~~g~~G~~-dG~~~~a~f~~P~GIAVD~dGnIYVAD~~N--------- 151 (495)
..|.+|+++++ |+|||++..+ ++..+ .... ..... ........+..|.+|++|++|+|||++..+
T Consensus 71 ~~~~~i~~~~~~g~l~v~~~~~-~l~~~-d~~g--~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~ 146 (314)
T 1pjx_A 71 GIPAGCQCDRDANQLFVADMRL-GLLVV-QTDG--TFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTR 146 (314)
T ss_dssp CCEEEEEECSSSSEEEEEETTT-EEEEE-ETTS--CEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCB
T ss_pred CCCceEEEecCCCcEEEEECCC-CEEEE-eCCC--CEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccc
Confidence 47999999999 9999999865 34443 2221 11110 000011245679999999999999999865
Q ss_pred ------CEEEEEcCCC-cEEEecCcccCCCCCCCCCCcCcccCCCceEEEEC----CCC-eEEEEECCCCeEEEEECCC-
Q 011014 152 ------MAIRKISDTG-VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVG----SSC-SLLVIDRGNQAIREIQLHD- 218 (495)
Q Consensus 152 ------~rIrk~d~~G-V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd----~~G-~LyVaD~gN~rI~~~d~~g- 218 (495)
++|.+++.+| +..+.. .+..|.++++ + .+| .|||+|..+++|.++++++
T Consensus 147 ~~~~~~~~l~~~~~~g~~~~~~~-----------------~~~~~~~i~~-~~~~d~dg~~l~v~~~~~~~i~~~~~~~~ 208 (314)
T 1pjx_A 147 SMQEKFGSIYCFTTDGQMIQVDT-----------------AFQFPNGIAV-RHMNDGRPYQLIVAETPTKKLWSYDIKGP 208 (314)
T ss_dssp TTSSSCEEEEEECTTSCEEEEEE-----------------EESSEEEEEE-EECTTSCEEEEEEEETTTTEEEEEEEEET
T ss_pred cccCCCCeEEEECCCCCEEEecc-----------------CCCCcceEEE-ecccCCCCCEEEEEECCCCeEEEEECCCC
Confidence 6899999777 333321 2346788884 5 666 7999999999999999752
Q ss_pred Cce------eeC-CCC-CCcceEEEEecCcCeEEEEEccCCceEEE
Q 011014 219 DDC------SDN-YDD-TFHLGIFVLVAAAFFGYMLALLQRRVQAM 256 (495)
Q Consensus 219 ~~~------~~~-~~~-g~P~GIAvd~~a~~~~yv~d~~~~Rv~~~ 256 (495)
... ... ... +.|.+|++|. .+++|+++..+++|..+
T Consensus 209 g~~~~~~~~~~~~~~~~~~p~~i~~d~--~G~l~v~~~~~~~i~~~ 252 (314)
T 1pjx_A 209 AKIENKKVWGHIPGTHEGGADGMDFDE--DNNLLVANWGSSHIEVF 252 (314)
T ss_dssp TEEEEEEEEEECCCCSSCEEEEEEEBT--TCCEEEEEETTTEEEEE
T ss_pred CccccceEEEECCCCCCCCCCceEECC--CCCEEEEEcCCCEEEEE
Confidence 221 112 222 6799999996 56899999988899543
No 51
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.05 E-value=4e-09 Score=105.79 Aligned_cols=172 Identities=14% Similarity=0.047 Sum_probs=106.8
Q ss_pred CCCCceEEEEcCCCcEEEEECCC-----CeeEEEEcCCC--CccccccCCCcCccccCCcceEEEcC-CCCEEEEEC---
Q 011014 81 FGMEPFSVAVSPSGELLVLDSEN-----NSRPKLVAGSP--EGYYGHVDGRPRGARMNHPKGLAVDD-RGNIYIADT--- 149 (495)
Q Consensus 81 ~~~~P~GIAVd~dG~LyVaDs~n-----~~ii~ivaGs~--~g~~G~~dG~~~~a~f~~P~GIAVD~-dGnIYVAD~--- 149 (495)
.+..|.+|++|++|+|||+|..+ .++..+-..+. ...... ... .......|.+|++|+ +|.+||+|.
T Consensus 65 ~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~-~~~-~~~~~~~~~~v~vd~~~g~~yvtd~~~~ 142 (343)
T 2qe8_A 65 TFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYL-PPP-ITLSNSFVNDLAVDLIHNFVYISDPAPD 142 (343)
T ss_dssp CCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEEC-CTT-TSCTTCCCCEEEEETTTTEEEEEECCSG
T ss_pred ceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEEC-Chh-hcccccccceEEEecCCCEEEEEcCccC
Confidence 35689999999999999999873 43433322221 111111 000 012335789999996 578999999
Q ss_pred CCCEEEEEcCC-C-cEEEecCcccCCC----CCCCCC-----CcCc----ccCCCceEEEECCCC-eEEEEECCCCeEEE
Q 011014 150 MNMAIRKISDT-G-VTTIAGGKWSRGV----GHVDGP-----SEDA----KFSNDFDVVYVGSSC-SLLVIDRGNQAIRE 213 (495)
Q Consensus 150 ~N~rIrk~d~~-G-V~tiaGg~~G~~~----g~~dG~-----~~~a----~f~~P~gVa~vd~~G-~LyVaD~gN~rI~~ 213 (495)
.++.|.+++.. | +..+..+..+... -..+|. .... ....|++|+ ++++| .||+++..+++|.+
T Consensus 143 ~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia-~s~dg~~ly~~~~~~~~l~~ 221 (343)
T 2qe8_A 143 DKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIV-LDAENEWLYLSPMHSTSMYR 221 (343)
T ss_dssp GGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEE-ECTTSCEEEEEESSCSEEEE
T ss_pred CCCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeE-eccCCCEEEEEeCCCCeEEE
Confidence 89999999954 5 3333222100000 000110 0000 114688999 56666 79999999999999
Q ss_pred EECC----CCc--------eeeCCCCCCcceEEEEecCcCeEEEEEccCCceEEEe
Q 011014 214 IQLH----DDD--------CSDNYDDTFHLGIFVLVAAAFFGYMLALLQRRVQAMF 257 (495)
Q Consensus 214 ~d~~----g~~--------~~~~~~~g~P~GIAvd~~a~~~~yv~d~~~~Rv~~~~ 257 (495)
++.+ +.. +...+..+.|.||++|. .+++|+++..+++|..+-
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~--~G~l~va~~~~~~V~~~d 275 (343)
T 2qe8_A 222 IKSADLSNLQLTDAELGSKIERYSEKPICDGISIDK--DHNIYVGDLAHSAIGVIT 275 (343)
T ss_dssp EEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECT--TCCEEEEEGGGTEEEEEE
T ss_pred EEHHHhcCCCCChhhhhcceEecccCCCCceEEECC--CCCEEEEccCCCeEEEEE
Confidence 9853 110 11122345899999997 578999999999995443
No 52
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.04 E-value=3.8e-09 Score=101.95 Aligned_cols=158 Identities=10% Similarity=0.071 Sum_probs=106.8
Q ss_pred CCceEEEEcCCCcEEEE-------ECCCCeeEEEEcCCCCccccccCCCcCccccCCcceEEEcCC-CCEEEEECCCCEE
Q 011014 83 MEPFSVAVSPSGELLVL-------DSENNSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDR-GNIYIADTMNMAI 154 (495)
Q Consensus 83 ~~P~GIAVd~dG~LyVa-------Ds~n~~ii~ivaGs~~g~~G~~dG~~~~a~f~~P~GIAVD~d-GnIYVAD~~N~rI 154 (495)
..|.+++++++|+|||+ |..++++..+-..+..-. -... .........|.+|++|++ |+|||++..+ +|
T Consensus 18 ~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~-~~~~-~~~~~~~~~~~~i~~~~~~g~l~v~~~~~-~l 94 (314)
T 1pjx_A 18 PGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKT-VICK-PEVNGYGGIPAGCQCDRDANQLFVADMRL-GL 94 (314)
T ss_dssp TTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEE-EEEC-CEETTEECCEEEEEECSSSSEEEEEETTT-EE
T ss_pred CCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEE-EEEe-cccCCCCCCCceEEEecCCCcEEEEECCC-CE
Confidence 47999999999999999 766664443321221100 0000 000012357999999999 9999999854 89
Q ss_pred EEEcCCC-cEEE-ecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECCC---------------CeEEEEECC
Q 011014 155 RKISDTG-VTTI-AGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGN---------------QAIREIQLH 217 (495)
Q Consensus 155 rk~d~~G-V~ti-aGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~gN---------------~rI~~~d~~ 217 (495)
.+++.+| +..+ .... ....+..|.+|+ ++.+|+|||++..+ ++|.+++++
T Consensus 95 ~~~d~~g~~~~~~~~~~------------~~~~~~~~~~i~-~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 161 (314)
T 1pjx_A 95 LVVQTDGTFEEIAKKDS------------EGRRMQGCNDCA-FDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD 161 (314)
T ss_dssp EEEETTSCEEECCSBCT------------TSCBCBCCCEEE-ECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT
T ss_pred EEEeCCCCEEEEEeccC------------CCccccCCcCEE-ECCCCCEEEEecCcccccccccccccCCCCeEEEECCC
Confidence 9999777 3333 2110 012356789998 68999999999876 689999988
Q ss_pred CCceeeCCCCCCcceEEEE----ecCcCeEEEEEccCCceEEEe
Q 011014 218 DDDCSDNYDDTFHLGIFVL----VAAAFFGYMLALLQRRVQAMF 257 (495)
Q Consensus 218 g~~~~~~~~~g~P~GIAvd----~~a~~~~yv~d~~~~Rv~~~~ 257 (495)
+...........|.+++++ . .+..+|+++..+++|..+-
T Consensus 162 g~~~~~~~~~~~~~~i~~~~~~d~-dg~~l~v~~~~~~~i~~~~ 204 (314)
T 1pjx_A 162 GQMIQVDTAFQFPNGIAVRHMNDG-RPYQLIVAETPTKKLWSYD 204 (314)
T ss_dssp SCEEEEEEEESSEEEEEEEECTTS-CEEEEEEEETTTTEEEEEE
T ss_pred CCEEEeccCCCCcceEEEecccCC-CCCEEEEEECCCCeEEEEE
Confidence 6544333344568999998 5 2337899999999996554
No 53
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=99.03 E-value=3.1e-09 Score=108.31 Aligned_cols=155 Identities=14% Similarity=0.131 Sum_probs=101.5
Q ss_pred CCCceEEEEcCCCcEEEEECCCCeeEEEEc-CCCCccccccCCCcCccccCCcceEEEcCC----CCEEEEECCC-----
Q 011014 82 GMEPFSVAVSPSGELLVLDSENNSRPKLVA-GSPEGYYGHVDGRPRGARMNHPKGLAVDDR----GNIYIADTMN----- 151 (495)
Q Consensus 82 ~~~P~GIAVd~dG~LyVaDs~n~~ii~iva-Gs~~g~~G~~dG~~~~a~f~~P~GIAVD~d----GnIYVAD~~N----- 151 (495)
+..|.+|+++++|.|||+|.. . .+.++. |.... ..... .....+..|.|||++++ |.|||+++.+
T Consensus 30 l~~P~~ia~~pdG~l~V~e~~-g-~I~~i~~g~~~~-~~~~~--v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~ 104 (352)
T 2ism_A 30 LEVPWALAFLPDGGMLIAERP-G-RIRLFREGRLST-YAELS--VYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLR 104 (352)
T ss_dssp CSCEEEEEECTTSCEEEEETT-T-EEEEEETTEEEE-EEECC--CCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSE
T ss_pred CCCceEEEEcCCCeEEEEeCC-C-eEEEEECCCccE-eecce--EeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCc
Confidence 348999999999999999987 4 444443 32111 11001 11224678999999997 8899999865
Q ss_pred CEEEEEcCCC--c---EEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECC-------------CCeEEE
Q 011014 152 MAIRKISDTG--V---TTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRG-------------NQAIRE 213 (495)
Q Consensus 152 ~rIrk~d~~G--V---~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~g-------------N~rI~~ 213 (495)
++|.+++.++ + .++..+.. ........|.+|+ ++++|.|||++.. +++|.+
T Consensus 105 ~~v~r~~~~~~~~~~~~~l~~~~p----------~~~~~~h~~~~l~-~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~r 173 (352)
T 2ism_A 105 NQVVRLRHLGERGVLDRVVLDGIP----------ARPHGLHSGGRIA-FGPDGMLYVTTGEVYERELAQDLASLGGKILR 173 (352)
T ss_dssp EEEEEEEECSSCEEEEEEEEEEEC----------CCTTCCCCCCCEE-ECTTSCEEEECCCTTCGGGGGCTTCSSSEEEE
T ss_pred cEEEEEEeCCCCcCceEEEEEeCC----------CCCCCCcCCceEE-ECCCCCEEEEECCCCCCccccCCCCCceEEEE
Confidence 8999999543 1 22211100 0012356788998 7899999999742 368999
Q ss_pred EECCCCce--------------eeCCCCCCcceEEEEecCcCeEEEEEccCCce
Q 011014 214 IQLHDDDC--------------SDNYDDTFHLGIFVLVAAAFFGYMLALLQRRV 253 (495)
Q Consensus 214 ~d~~g~~~--------------~~~~~~g~P~GIAvd~~a~~~~yv~d~~~~Rv 253 (495)
|+++|... .+..+...|.||+++.. .+.+|+++..++++
T Consensus 174 i~~dG~~p~~npf~~~~~~~~~i~a~G~rnp~g~a~d~~-~g~l~v~d~g~~~~ 226 (352)
T 2ism_A 174 LTPEGEPAPGNPFLGRRGARPEVYSLGHRNPQGLAWHPK-TGELFSSEHGPSGE 226 (352)
T ss_dssp ECTTSSBCTTCTTTTCTTSCTTEEEECCSEECCCEECTT-TCCEEEEEECC---
T ss_pred EcCCCCCCCCCcccCCCCCCccEEEEcCCCcccEEEECC-CCCEEEEEcCCCCC
Confidence 99998321 11223345999999963 35799999998885
No 54
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.02 E-value=1.4e-08 Score=101.90 Aligned_cols=160 Identities=11% Similarity=0.040 Sum_probs=104.4
Q ss_pred CCceEEEEcCCCcEEEEECCC----CeeEEEEcCCCCccccccCCCcCccccCCcceEEEcCCCCEEEEECC-----CCE
Q 011014 83 MEPFSVAVSPSGELLVLDSEN----NSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTM-----NMA 153 (495)
Q Consensus 83 ~~P~GIAVd~dG~LyVaDs~n----~~ii~ivaGs~~g~~G~~dG~~~~a~f~~P~GIAVD~dGnIYVAD~~-----N~r 153 (495)
..|.+|+++++|+|||+.... .++..+-.|........ . ......|..|.||++|++|+|||+|.+ .++
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~~~~p~~-~-~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~ 94 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGLIPFPPQ-S-GNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPK 94 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEEEESCCC-C-SSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCE
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCeecCCCc-c-cCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCe
Confidence 379999999999999997421 12333322211100000 0 112347899999999999999999987 589
Q ss_pred EEEEcCC-C--cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEEC---CCCeEEEEECCCCce-eeCCC
Q 011014 154 IRKISDT-G--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDR---GNQAIREIQLHDDDC-SDNYD 226 (495)
Q Consensus 154 Irk~d~~-G--V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~---gN~rI~~~d~~g~~~-~~~~~ 226 (495)
|.+||.+ | +.++...... ......|++|++...++.+||+|. .++.|.++++.+... .....
T Consensus 95 i~~~d~~tg~~~~~~~~~~~~-----------~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~ 163 (343)
T 2qe8_A 95 LVAWDTLNNQLSRVIYLPPPI-----------TLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQG 163 (343)
T ss_dssp EEEEETTTTEEEEEEECCTTT-----------SCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTT
T ss_pred EEEEECCCCeEEEEEECChhh-----------cccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecC
Confidence 9999954 5 3444221100 012357899995335789999999 899999999875332 21111
Q ss_pred ------------------------------CCCcceEEEEecCcCeEEEEEccCCceEEE
Q 011014 227 ------------------------------DTFHLGIFVLVAAAFFGYMLALLQRRVQAM 256 (495)
Q Consensus 227 ------------------------------~g~P~GIAvd~~a~~~~yv~d~~~~Rv~~~ 256 (495)
...|.||+++. .+..+|+++...+++-.+
T Consensus 164 ~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~-dg~~ly~~~~~~~~l~~~ 222 (343)
T 2qe8_A 164 YPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDA-ENEWLYLSPMHSTSMYRI 222 (343)
T ss_dssp CTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECT-TSCEEEEEESSCSEEEEE
T ss_pred CCcccccccceeECCEEEEeccCCCceeceecccceeEecc-CCCEEEEEeCCCCeEEEE
Confidence 01268899986 245799999988888433
No 55
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=99.02 E-value=5.6e-09 Score=106.78 Aligned_cols=164 Identities=17% Similarity=0.096 Sum_probs=107.6
Q ss_pred CceEEEeecCCCCCCCceEEEEcCCCcEEEEECCCCeeEEEEcCCCCccccccCCCcCccccCCcceEEEcCC----CCE
Q 011014 69 GYTVETVFEGSKFGMEPFSVAVSPSGELLVLDSENNSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDR----GNI 144 (495)
Q Consensus 69 G~~~~~~~~G~~~~~~P~GIAVd~dG~LyVaDs~n~~ii~ivaGs~~g~~G~~dG~~~~a~f~~P~GIAVD~d----GnI 144 (495)
++.++....+ +..|.+|+++++|.|||+|.. . .+.++............ .....+..|.|||++++ |.|
T Consensus 18 ~~~~~~va~~---l~~P~~ia~~pdG~l~V~e~~-g-~I~~~d~~G~~~~~~~~--v~~~g~~g~~gia~~pdf~~~g~l 90 (354)
T 3a9g_A 18 KFKISEVASD---LEVPWSIAPLGGGRYLVTERP-G-RLVLISPSGKKLVASFD--VANVGEAGLLGLALHPEFPKKSWV 90 (354)
T ss_dssp CEEEEEEECS---CSCEEEEEEEETTEEEEEETT-T-EEEEECSSCEEEEEECC--CCCSTTCSEEEEEECTTTTTSCEE
T ss_pred CeEEEEEeCC---CCCCeEEEEcCCCeEEEEeCC-C-EEEEEeCCCceEeeccc--eeecCCCceeeEEeCCCCCcCCEE
Confidence 3444444432 458999999999999999987 3 45555432210111101 11223567999999996 899
Q ss_pred EEEECC---C----CEEEEEcCCC-------cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECC---
Q 011014 145 YIADTM---N----MAIRKISDTG-------VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRG--- 207 (495)
Q Consensus 145 YVAD~~---N----~rIrk~d~~G-------V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~g--- 207 (495)
||+++. + ++|.+++.++ ..++..+.. ......|.+|+ ++++|.|||++..
T Consensus 91 yv~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~------------~~~~h~~~~l~-~~pDG~Lyvt~G~~~~ 157 (354)
T 3a9g_A 91 YLYASYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIP------------GAYIHNGGRIR-FGPDGMLYITTGDAAD 157 (354)
T ss_dssp EEEEEEECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEE------------CCSSCCCCCEE-ECTTSCEEEECCCTTC
T ss_pred EEEEeccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCC------------CCCCcCCceEE-ECCCCcEEEEECCCCC
Confidence 999974 4 7999998443 122211100 11345788898 7999999999632
Q ss_pred ----------CCeEEEEECCCCc---------eeeCCCCCCcceEEEEecCcCeEEEEEccCCce
Q 011014 208 ----------NQAIREIQLHDDD---------CSDNYDDTFHLGIFVLVAAAFFGYMLALLQRRV 253 (495)
Q Consensus 208 ----------N~rI~~~d~~g~~---------~~~~~~~g~P~GIAvd~~a~~~~yv~d~~~~Rv 253 (495)
+++|.+|+++|.. -.+..+...|.||++|.. .+.+|+++...++.
T Consensus 158 ~~~~~d~~~~~G~I~ri~~dG~~p~~npf~~~~i~a~G~rnp~Gla~d~~-~g~l~v~d~g~~~~ 221 (354)
T 3a9g_A 158 PRLAQDLSSLAGKILRVDEEGRPPADNPFPNSPIWSYGHRNPQGIDWHRA-SGVMVATEHGPVGH 221 (354)
T ss_dssp GGGGTCTTCCSSEEEEECTTSCCCTTSSSTTCCEEEECCSCCCEEEECTT-TCCEEEEECCSSSC
T ss_pred CccccCCCCCCeEEEEEcCCCCCCCCCCCCCCcEEEEccCCcceEEEeCC-CCCEEEEecCCCCC
Confidence 3689999999862 122334456999999963 35799999988774
No 56
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.97 E-value=4.5e-08 Score=97.59 Aligned_cols=143 Identities=10% Similarity=0.041 Sum_probs=98.6
Q ss_pred CCceEEEEcCCCcEEEEECCCCeeEEEEc-CCCCccccccCCCcCccccCCcceEEEcCCCCEEEEECC-CCEEEEEcCC
Q 011014 83 MEPFSVAVSPSGELLVLDSENNSRPKLVA-GSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTM-NMAIRKISDT 160 (495)
Q Consensus 83 ~~P~GIAVd~dG~LyVaDs~n~~ii~iva-Gs~~g~~G~~dG~~~~a~f~~P~GIAVD~dGnIYVAD~~-N~rIrk~d~~ 160 (495)
..|.+|+++++|.|||++..++ .+.++. .+. .............++..|.+|++ .++.|||++.+ ++.|.+||..
T Consensus 84 ~~p~~i~~~~~g~lyv~~~~~~-~v~~iD~~t~-~~~~~i~~g~~~~~~~~p~~i~~-~~~~lyv~~~~~~~~v~viD~~ 160 (328)
T 3dsm_A 84 TSPRYIHFLSDEKAYVTQIWDY-RIFIINPKTY-EITGYIECPDMDMESGSTEQMVQ-YGKYVYVNCWSYQNRILKIDTE 160 (328)
T ss_dssp SSEEEEEEEETTEEEEEEBSCS-EEEEEETTTT-EEEEEEECTTCCTTTCBCCCEEE-ETTEEEEEECTTCCEEEEEETT
T ss_pred CCCcEEEEeCCCeEEEEECCCC-eEEEEECCCC-eEEEEEEcCCccccCCCcceEEE-ECCEEEEEcCCCCCEEEEEECC
Confidence 5799999988899999996555 344443 222 11111010011235568999999 47899999984 8999999955
Q ss_pred -C--cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECCC----------CeEEEEECCCCcee-eC--
Q 011014 161 -G--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGN----------QAIREIQLHDDDCS-DN-- 224 (495)
Q Consensus 161 -G--V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~gN----------~rI~~~d~~g~~~~-~~-- 224 (495)
+ +.++..+ ..|.+++ ++++|.+||++.++ +.|.+|++.+..+. ..
T Consensus 161 t~~~~~~i~~g------------------~~p~~i~-~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~ 221 (328)
T 3dsm_A 161 TDKVVDELTIG------------------IQPTSLV-MDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKF 221 (328)
T ss_dssp TTEEEEEEECS------------------SCBCCCE-ECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEEC
T ss_pred CCeEEEEEEcC------------------CCccceE-EcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEec
Confidence 4 3444211 2578888 68899999999886 89999999876654 22
Q ss_pred CCCCCcceEEEEecCcCeEEEEEc
Q 011014 225 YDDTFHLGIFVLVAAAFFGYMLAL 248 (495)
Q Consensus 225 ~~~g~P~GIAvd~~a~~~~yv~d~ 248 (495)
.....|.+++++. .+..+|+++.
T Consensus 222 ~~g~~p~~la~~~-d~~~lyv~~~ 244 (328)
T 3dsm_A 222 KLGDWPSEVQLNG-TRDTLYWINN 244 (328)
T ss_dssp CTTCCCEEEEECT-TSCEEEEESS
T ss_pred CCCCCceeEEEec-CCCEEEEEcc
Confidence 1123799999995 2568899875
No 57
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=98.94 E-value=1.6e-08 Score=104.31 Aligned_cols=147 Identities=12% Similarity=0.036 Sum_probs=101.4
Q ss_pred CCceEEEEcC--CC--cEEEEECCC-CeeEEEEc---CCC-CccccccCCCcCccccCCcceEEEcCCCCEEEEEC----
Q 011014 83 MEPFSVAVSP--SG--ELLVLDSEN-NSRPKLVA---GSP-EGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADT---- 149 (495)
Q Consensus 83 ~~P~GIAVd~--dG--~LyVaDs~n-~~ii~iva---Gs~-~g~~G~~dG~~~~a~f~~P~GIAVD~dGnIYVAD~---- 149 (495)
.+|+||.+.. +| +|||++... ...+.++. ++. ........+ ..|+.|+++++|++|.+||++.
T Consensus 112 f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g----~~~~~pND~~v~~~G~fyvt~~~~ft 187 (355)
T 3sre_A 112 FNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRH----KLLPSVNDIVAVGPEHFYATNDHYFI 187 (355)
T ss_dssp CCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECC----TTCSSEEEEEEEETTEEEEEESCSCS
T ss_pred eeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEecccc----CCCCCCceEEEeCCCCEEecCCcEeC
Confidence 4899999955 45 599999873 22444432 221 011111122 3789999999999999999975
Q ss_pred -------------CCCEEEEEcCCCcEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCC-eEEEEECCCCeEEEEE
Q 011014 150 -------------MNMAIRKISDTGVTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSC-SLLVIDRGNQAIREIQ 215 (495)
Q Consensus 150 -------------~N~rIrk~d~~GV~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G-~LyVaD~gN~rI~~~d 215 (495)
...+|.+++++.++.++. .+..|+||++ ++++ .|||+|+..++|++|+
T Consensus 188 d~~~~~~e~~~~~~~g~vyr~d~~~~~~~~~-----------------~l~~pNGia~-spDg~~lYvadt~~~~I~~~~ 249 (355)
T 3sre_A 188 DPYLKSWEMHLGLAWSFVTYYSPNDVRVVAE-----------------GFDFANGINI-SPDGKYVYIAELLAHKIHVYE 249 (355)
T ss_dssp SHHHHHHHHHTTCCCEEEEEECTTCCEEEEE-----------------EESSEEEEEE-CTTSSEEEEEEGGGTEEEEEE
T ss_pred CcccccchhhccCCccEEEEEECCeEEEeec-----------------CCcccCcceE-CCCCCEEEEEeCCCCeEEEEE
Confidence 246788888755555532 3668999995 5555 8999999999999999
Q ss_pred CCCC-cee---eCCCCCCcceEEEEecCc-CeEEEEEccC-Cce
Q 011014 216 LHDD-DCS---DNYDDTFHLGIFVLVAAA-FFGYMLALLQ-RRV 253 (495)
Q Consensus 216 ~~g~-~~~---~~~~~g~P~GIAvd~~a~-~~~yv~d~~~-~Rv 253 (495)
.+.. ... .....+.|.|+++|. . +++|+++..+ .+|
T Consensus 250 ~~~~g~l~~~~~~~~~g~PDGi~vD~--e~G~lwva~~~~g~~v 291 (355)
T 3sre_A 250 KHANWTLTPLRVLSFDTLVDNISVDP--VTGDLWVGCHPNGMRI 291 (355)
T ss_dssp ECTTSCEEEEEEEECSSEEEEEEECT--TTCCEEEEEESCHHHH
T ss_pred ECCCCcEecCEEEeCCCCCceEEEeC--CCCcEEEEecCCceEE
Confidence 8642 221 123357899999995 3 6899988644 455
No 58
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.91 E-value=1e-07 Score=94.99 Aligned_cols=148 Identities=16% Similarity=0.044 Sum_probs=100.6
Q ss_pred CceEEEEcCCCcEEEEECC-CCeeEEEEcCCCCccccccCCCcCccccCCcceEEEcCCCCEEEEECCC----------C
Q 011014 84 EPFSVAVSPSGELLVLDSE-NNSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMN----------M 152 (495)
Q Consensus 84 ~P~GIAVd~dG~LyVaDs~-n~~ii~ivaGs~~g~~G~~dG~~~~a~f~~P~GIAVD~dGnIYVAD~~N----------~ 152 (495)
.|.+|++ .++.|||++.. .+ .+.++.-.......... .-..|.+|++|++|++||++.++ +
T Consensus 132 ~p~~i~~-~~~~lyv~~~~~~~-~v~viD~~t~~~~~~i~------~g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~ 203 (328)
T 3dsm_A 132 STEQMVQ-YGKYVYVNCWSYQN-RILKIDTETDKVVDELT------IGIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAP 203 (328)
T ss_dssp BCCCEEE-ETTEEEEEECTTCC-EEEEEETTTTEEEEEEE------CSSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCC
T ss_pred CcceEEE-ECCEEEEEcCCCCC-EEEEEECCCCeEEEEEE------cCCCccceEEcCCCCEEEEECCCccCCccccCCc
Confidence 8999999 47899999984 55 45554322101111101 12368999999999999999876 8
Q ss_pred EEEEEcCCC--c-EEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCceee---CC-
Q 011014 153 AIRKISDTG--V-TTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCSD---NY- 225 (495)
Q Consensus 153 rIrk~d~~G--V-~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~gN~rI~~~d~~g~~~~~---~~- 225 (495)
+|.+||... + .++.- .. -..|.++++..+.+.|||++. .|.+|++.+..+.. ..
T Consensus 204 ~v~~id~~t~~v~~~~~~-~~---------------g~~p~~la~~~d~~~lyv~~~---~v~~~d~~t~~~~~~~~~~~ 264 (328)
T 3dsm_A 204 SLYRIDAETFTVEKQFKF-KL---------------GDWPSEVQLNGTRDTLYWINN---DIWRMPVEADRVPVRPFLEF 264 (328)
T ss_dssp EEEEEETTTTEEEEEEEC-CT---------------TCCCEEEEECTTSCEEEEESS---SEEEEETTCSSCCSSCSBCC
T ss_pred eEEEEECCCCeEEEEEec-CC---------------CCCceeEEEecCCCEEEEEcc---EEEEEECCCCceeeeeeecC
Confidence 999999654 3 23311 00 026899995445678999986 89999998765432 11
Q ss_pred CCCCcceEEEEecCcCeEEEEE----ccCCceEEEeeCCC
Q 011014 226 DDTFHLGIFVLVAAAFFGYMLA----LLQRRVQAMFSSKD 261 (495)
Q Consensus 226 ~~g~P~GIAvd~~a~~~~yv~d----~~~~Rv~~~~~s~~ 261 (495)
....|.||+++. .++.+||++ ..+++| .+|+.+
T Consensus 265 ~~~~p~gi~vdp-~~g~lyva~~~~y~~~~~V--~v~d~~ 301 (328)
T 3dsm_A 265 RDTKYYGLTVNP-NNGEVYVADAIDYQQQGIV--YRYSPQ 301 (328)
T ss_dssp CSSCEEEEEECT-TTCCEEEEECTTSSSEEEE--EEECTT
T ss_pred CCCceEEEEEcC-CCCeEEEEcccccccCCEE--EEECCC
Confidence 135799999984 256899999 778888 455544
No 59
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=98.91 E-value=2.2e-07 Score=90.90 Aligned_cols=149 Identities=14% Similarity=0.083 Sum_probs=102.2
Q ss_pred CCceEEEEcCCCcEEEEECCC----CeeEEEEcCCCCcccc-ccCCCcCccccCCcceEEEcCCCCEEEEECC------C
Q 011014 83 MEPFSVAVSPSGELLVLDSEN----NSRPKLVAGSPEGYYG-HVDGRPRGARMNHPKGLAVDDRGNIYIADTM------N 151 (495)
Q Consensus 83 ~~P~GIAVd~dG~LyVaDs~n----~~ii~ivaGs~~g~~G-~~dG~~~~a~f~~P~GIAVD~dGnIYVAD~~------N 151 (495)
..|.+|+++++|+|||++..+ .+ +.++.-.. +... .... ......|.+|++|++|+|||++.. +
T Consensus 87 ~~~~~i~~~~dg~l~v~~~~~~~~~~~-i~~~d~~~-~~~~~~~~~---~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~ 161 (333)
T 2dg1_A 87 ANPAAIKIHKDGRLFVCYLGDFKSTGG-IFAATENG-DNLQDIIED---LSTAYCIDDMVFDSKGGFYFTDFRGYSTNPL 161 (333)
T ss_dssp SSEEEEEECTTSCEEEEECTTSSSCCE-EEEECTTS-CSCEEEECS---SSSCCCEEEEEECTTSCEEEEECCCBTTBCC
T ss_pred CCcceEEECCCCcEEEEeCCCCCCCce-EEEEeCCC-CEEEEEEcc---CccCCcccceEECCCCCEEEEeccccccCCC
Confidence 479999999999999999766 43 33443211 1100 0000 012357899999999999999975 4
Q ss_pred CEEEEEcCCC--cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCC-eEEEEECCCCeEEEEECC--CCcee----
Q 011014 152 MAIRKISDTG--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSC-SLLVIDRGNQAIREIQLH--DDDCS---- 222 (495)
Q Consensus 152 ~rIrk~d~~G--V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G-~LyVaD~gN~rI~~~d~~--g~~~~---- 222 (495)
.+|.+++.++ +..+.. .+..|.+++ ++++| .|||++..+++|++++++ +....
T Consensus 162 ~~l~~~~~~~~~~~~~~~-----------------~~~~~~~i~-~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~ 223 (333)
T 2dg1_A 162 GGVYYVSPDFRTVTPIIQ-----------------NISVANGIA-LSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGA 223 (333)
T ss_dssp EEEEEECTTSCCEEEEEE-----------------EESSEEEEE-ECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEE
T ss_pred ceEEEEeCCCCEEEEeec-----------------CCCcccceE-ECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccc
Confidence 7899999764 333321 134578888 57777 599999989999999984 33321
Q ss_pred ----eCCCCCCcceEEEEecCcCeEEEEEccCCceEEE
Q 011014 223 ----DNYDDTFHLGIFVLVAAAFFGYMLALLQRRVQAM 256 (495)
Q Consensus 223 ----~~~~~g~P~GIAvd~~a~~~~yv~d~~~~Rv~~~ 256 (495)
...+...|.+|++|. .+++|+++..+++|..+
T Consensus 224 ~~~~~~~~~~~~~~i~~d~--~G~l~v~~~~~~~v~~~ 259 (333)
T 2dg1_A 224 TIPYYFTGHEGPDSCCIDS--DDNLYVAMYGQGRVLVF 259 (333)
T ss_dssp EEEEECCSSSEEEEEEEBT--TCCEEEEEETTTEEEEE
T ss_pred eEEEecCCCCCCCceEECC--CCCEEEEEcCCCEEEEE
Confidence 112224799999997 56899999888888443
No 60
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=98.82 E-value=3.9e-07 Score=89.40 Aligned_cols=143 Identities=13% Similarity=0.075 Sum_probs=101.6
Q ss_pred CceEEEEcCCCcEEEEECC-CCeeEEEEcCCC--CccccccCCCcCccccCCcceEEEcCCCCEEEEECCCCEEEEEcCC
Q 011014 84 EPFSVAVSPSGELLVLDSE-NNSRPKLVAGSP--EGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMNMAIRKISDT 160 (495)
Q Consensus 84 ~P~GIAVd~dG~LyVaDs~-n~~ii~ivaGs~--~g~~G~~dG~~~~a~f~~P~GIAVD~dGnIYVAD~~N~rIrk~d~~ 160 (495)
...++++.++|+++|++.. +. ++..+.-.+ ....+. ++ .....+..|.+++++.+|+++|++..+++|..||.+
T Consensus 78 ~~~~~~~~~dG~~lv~~~~~~~-~v~~vd~~Gk~l~~~~~-~~-~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~ 154 (276)
T 3no2_A 78 EMQTARILPDGNALVAWCGHPS-TILEVNMKGEVLSKTEF-ET-GIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN 154 (276)
T ss_dssp EEEEEEECTTSCEEEEEESTTE-EEEEECTTSCEEEEEEE-CC-SCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT
T ss_pred cccccEECCCCCEEEEecCCCC-EEEEEeCCCCEEEEEec-cC-CCCcccccccCceECCCCCEEEEecCCCEEEEECCC
Confidence 4567888899999999988 55 444443222 111221 11 112345578899999999999999999999999988
Q ss_pred C--cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECCCCeEEEEECC-CCceeeCC-------CCCCc
Q 011014 161 G--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLH-DDDCSDNY-------DDTFH 230 (495)
Q Consensus 161 G--V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~gN~rI~~~d~~-g~~~~~~~-------~~g~P 230 (495)
| +.++... ..|.+++ ...+|+++|++..+++|..|+++ |+.+-... ....|
T Consensus 155 G~~~w~~~~~------------------~~~~~~~-~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~ 215 (276)
T 3no2_A 155 GQLLNSVKLS------------------GTPFSSA-FLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFV 215 (276)
T ss_dssp SCEEEEEECS------------------SCCCEEE-ECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEE
T ss_pred CCEEEEEECC------------------CCcccee-EcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCcccccc
Confidence 9 3443211 2467777 57889999999999999999999 66653311 12248
Q ss_pred ceEEEEecCcCeEEEEEccC
Q 011014 231 LGIFVLVAAAFFGYMLALLQ 250 (495)
Q Consensus 231 ~GIAvd~~a~~~~yv~d~~~ 250 (495)
.+++++. .+++||++...
T Consensus 216 ~~~~~~~--~G~i~v~~~~g 233 (276)
T 3no2_A 216 AQLFPLQ--NGGLYICNWQG 233 (276)
T ss_dssp EEEEECT--TSCEEEEEECT
T ss_pred ccceEcC--CCCEEEEeccC
Confidence 9999997 77899999643
No 61
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=98.81 E-value=6.9e-07 Score=91.26 Aligned_cols=170 Identities=13% Similarity=0.080 Sum_probs=103.5
Q ss_pred CCceEEEEcCC----CcEEEEECC---C----CeeEEEEcCCCCcccc----ccCCCcCccccCCcceEEEcCCCCEEEE
Q 011014 83 MEPFSVAVSPS----GELLVLDSE---N----NSRPKLVAGSPEGYYG----HVDGRPRGARMNHPKGLAVDDRGNIYIA 147 (495)
Q Consensus 83 ~~P~GIAVd~d----G~LyVaDs~---n----~~ii~ivaGs~~g~~G----~~dG~~~~a~f~~P~GIAVD~dGnIYVA 147 (495)
..|.|||++++ |.|||++.. + +++.++-.....+... -.++. .......|.+|+++++|+|||+
T Consensus 73 ~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~-~~~~~h~~~~l~~~pDG~Lyvt 151 (354)
T 3a9g_A 73 AGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGI-PGAYIHNGGRIRFGPDGMLYIT 151 (354)
T ss_dssp CSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEE-ECCSSCCCCCEEECTTSCEEEE
T ss_pred CceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEEEEEEECCCCcCcCccEEEEEcC-CCCCCcCCceEEECCCCcEEEE
Confidence 46999999996 899999874 2 3344432211100000 00000 1123557899999999999999
Q ss_pred ECC-------------CCEEEEEcCCCcEEEecCcccCCCCCCCCCCcCcccCCCceEEEECC-CCeEEEEECCCCe---
Q 011014 148 DTM-------------NMAIRKISDTGVTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGS-SCSLLVIDRGNQA--- 210 (495)
Q Consensus 148 D~~-------------N~rIrk~d~~GV~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~-~G~LyVaD~gN~r--- 210 (495)
+.. +++|.+|+.+|. +.. + ..+.....-..-+.+|.+|+ +++ +|.|||+|.+.++
T Consensus 152 ~G~~~~~~~~~d~~~~~G~I~ri~~dG~--~p~---~--npf~~~~i~a~G~rnp~Gla-~d~~~g~l~v~d~g~~~~de 223 (354)
T 3a9g_A 152 TGDAADPRLAQDLSSLAGKILRVDEEGR--PPA---D--NPFPNSPIWSYGHRNPQGID-WHRASGVMVATEHGPVGHDE 223 (354)
T ss_dssp CCCTTCGGGGTCTTCCSSEEEEECTTSC--CCT---T--SSSTTCCEEEECCSCCCEEE-ECTTTCCEEEEECCSSSCCE
T ss_pred ECCCCCCccccCCCCCCeEEEEEcCCCC--CCC---C--CCCCCCcEEEEccCCcceEE-EeCCCCCEEEEecCCCCCcE
Confidence 642 368999998872 000 0 00000000111267899999 566 8999999998865
Q ss_pred EEEEECCCCc----e-------------eeC-CCCCCcceEEEEec-----CcCeEEEEEccCCceEEEeeCCC
Q 011014 211 IREIQLHDDD----C-------------SDN-YDDTFHLGIFVLVA-----AAFFGYMLALLQRRVQAMFSSKD 261 (495)
Q Consensus 211 I~~~d~~g~~----~-------------~~~-~~~g~P~GIAvd~~-----a~~~~yv~d~~~~Rv~~~~~s~~ 261 (495)
|..+...++. | ... .....|.|+++..+ ..+.+|+++....||..+-+...
T Consensus 224 i~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~~ap~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~ 297 (354)
T 3a9g_A 224 VNIILKGGNYGWPLATGKAGRGEFVDPVIDTGSETWAPSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDN 297 (354)
T ss_dssp EEEECTTCBCCTTTCCSCCCCTTSCCCSEECTTCCCCEEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGG
T ss_pred EEEecCCCcCCCCcccCCCCCCCCcCCEeecCCCCcCCcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCC
Confidence 7776643311 0 011 22335999999422 25689999999999977766543
No 62
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=98.79 E-value=3.5e-07 Score=89.76 Aligned_cols=151 Identities=13% Similarity=-0.000 Sum_probs=105.2
Q ss_pred CceEEEEcCCCcEEEEECCCCeeEEEEcCCCCccccccCCCcCccccCCcceEEEcCCCCEEEEECC-CCEEEEEcCCC-
Q 011014 84 EPFSVAVSPSGELLVLDSENNSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTM-NMAIRKISDTG- 161 (495)
Q Consensus 84 ~P~GIAVd~dG~LyVaDs~n~~ii~ivaGs~~g~~G~~dG~~~~a~f~~P~GIAVD~dGnIYVAD~~-N~rIrk~d~~G- 161 (495)
.+.+++++++|+|||+. ++ .+..+.-++.-..-...+ .-....++++.++|+++|+|.. +++|..|+++|
T Consensus 38 ~~~~~~~~pdG~ilvs~--~~-~V~~~d~~G~~~W~~~~~-----~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~~Gk 109 (276)
T 3no2_A 38 ECNSVAATKAGEILFSY--SK-GAKMITRDGRELWNIAAP-----AGCEMQTARILPDGNALVAWCGHPSTILEVNMKGE 109 (276)
T ss_dssp CCCEEEECTTSCEEEEC--BS-EEEEECTTSCEEEEEECC-----TTCEEEEEEECTTSCEEEEEESTTEEEEEECTTSC
T ss_pred CCcCeEECCCCCEEEeC--CC-CEEEECCCCCEEEEEcCC-----CCccccccEECCCCCEEEEecCCCCEEEEEeCCCC
Confidence 58899999999999943 44 344443332111111000 0012457888999999999998 99999999999
Q ss_pred -cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCceeeCCCCCCcceEEEEecCc
Q 011014 162 -VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCSDNYDDTFHLGIFVLVAAA 240 (495)
Q Consensus 162 -V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~gN~rI~~~d~~g~~~~~~~~~g~P~GIAvd~~a~ 240 (495)
+..+.... + ....+..|.+++ ...+|+++|++..+++|..|+++|+.+-.....+.|.+++++. .
T Consensus 110 ~l~~~~~~~-~----------~~~~~~~~~~v~-~~~~G~~lv~~~~~~~v~~~d~~G~~~w~~~~~~~~~~~~~~~--~ 175 (276)
T 3no2_A 110 VLSKTEFET-G----------IERPHAQFRQIN-KNKKGNYLVPLFATSEVREIAPNGQLLNSVKLSGTPFSSAFLD--N 175 (276)
T ss_dssp EEEEEEECC-S----------CSSGGGSCSCCE-ECTTSCEEEEETTTTEEEEECTTSCEEEEEECSSCCCEEEECT--T
T ss_pred EEEEEeccC-C----------CCcccccccCce-ECCCCCEEEEecCCCEEEEECCCCCEEEEEECCCCccceeEcC--C
Confidence 33432110 0 012344677787 6889999999999999999999988776544456788888875 6
Q ss_pred CeEEEEEccCCceEEE
Q 011014 241 FFGYMLALLQRRVQAM 256 (495)
Q Consensus 241 ~~~yv~d~~~~Rv~~~ 256 (495)
++++|++..++||..+
T Consensus 176 g~~~v~~~~~~~v~~~ 191 (276)
T 3no2_A 176 GDCLVACGDAHCFVQL 191 (276)
T ss_dssp SCEEEECBTTSEEEEE
T ss_pred CCEEEEeCCCCeEEEE
Confidence 7889999999999433
No 63
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.78 E-value=2.6e-07 Score=94.49 Aligned_cols=122 Identities=18% Similarity=0.046 Sum_probs=82.0
Q ss_pred cCCcceEEEcCCCCEEEEECCC-CEEEEEcCCCcEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECCC
Q 011014 130 MNHPKGLAVDDRGNIYIADTMN-MAIRKISDTGVTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGN 208 (495)
Q Consensus 130 f~~P~GIAVD~dGnIYVAD~~N-~rIrk~d~~GV~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~gN 208 (495)
+..|.+|++|++||+||+|+.. ..|.+++++|....++.... ........++||++.++...|+|++. .
T Consensus 136 ~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~~~~~~~~~~---------~~~~~~~G~nGIv~~pdg~~Liv~~~-~ 205 (334)
T 2p9w_A 136 PFGVVQSAQDRDGNSYVAFALGMPAIARVSADGKTVSTFAWES---------GNGGQRPGYSGITFDPHSNKLIAFGG-P 205 (334)
T ss_dssp CEEEEEEEECTTSCEEEEEEESSCEEEEECTTSCCEEEEEECC---------CCSSSCCSCSEEEEETTTTEEEEESS-S
T ss_pred ccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCCEEeeeeecC---------CCcccccCcceEEEeCCCCEEEEEcC-C
Confidence 3458899999999999999999 99999999993222111100 01123457899997655557788888 9
Q ss_pred CeEEEEECCCCce--eeC---C---CCCCcceE-EEEecCcCeEEEEEccCCceEEEeeCCCCCc
Q 011014 209 QAIREIQLHDDDC--SDN---Y---DDTFHLGI-FVLVAAAFFGYMLALLQRRVQAMFSSKDDPR 264 (495)
Q Consensus 209 ~rI~~~d~~g~~~--~~~---~---~~g~P~GI-Avd~~a~~~~yv~d~~~~Rv~~~~~s~~~~~ 264 (495)
++|.+|++..... .-. + ....|.|| ++.. .+..++|++..+.++ .++|+++-+
T Consensus 206 g~L~~fD~~~pv~~~v~~~~~G~~~~~~~~dgilp~~~-~G~vllV~~~~~~~~--~l~S~DgW~ 267 (334)
T 2p9w_A 206 RALTAFDVSKPYAWPEPVKINGDFGTLSGTEKIVTVPV-GNESVLVGARAPYAI--SFRSWDNWK 267 (334)
T ss_dssp SSEEEEECSSSSCCCEECEESSCCCCCTTEEEEEEEEE-TTEEEEEEEETTEEE--EEECSSTTS
T ss_pred CeEEEEcCCCCcceeecccccCCcccccCccccccccc-CCEEEEEEcCCCCEE--EEECCCCcc
Confidence 9999999885333 111 1 12247886 5554 234559999887765 667766644
No 64
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=98.78 E-value=3.4e-07 Score=89.53 Aligned_cols=154 Identities=10% Similarity=0.068 Sum_probs=105.2
Q ss_pred CCceEEEEcCCCcEEEEECCCCeeEEEEcCCCCccccccCCCcCccccCCcceEEEcCCCCEEEEECCC----CEEEEEc
Q 011014 83 MEPFSVAVSPSGELLVLDSENNSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMN----MAIRKIS 158 (495)
Q Consensus 83 ~~P~GIAVd~dG~LyVaDs~n~~ii~ivaGs~~g~~G~~dG~~~~a~f~~P~GIAVD~dGnIYVAD~~N----~rIrk~d 158 (495)
..|.+++++++|+||+++..+..+ .++.-.. +..-... ...-..|.+|++|++|+|||++..+ +.|.+++
T Consensus 45 ~~~~~~~~~~~g~l~~~~~~~~~i-~~~d~~~-~~~~~~~----~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d 118 (333)
T 2dg1_A 45 LQLEGLNFDRQGQLFLLDVFEGNI-FKINPET-KEIKRPF----VSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAAT 118 (333)
T ss_dssp CCEEEEEECTTSCEEEEETTTCEE-EEECTTT-CCEEEEE----ECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEEC
T ss_pred ccccCcEECCCCCEEEEECCCCEE-EEEeCCC-CcEEEEe----eCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEe
Confidence 368999999999999999877744 4443211 1100000 0012468999999999999999877 7999999
Q ss_pred CCC--cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECC------CCeEEEEECCCCceee-CCCCCC
Q 011014 159 DTG--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRG------NQAIREIQLHDDDCSD-NYDDTF 229 (495)
Q Consensus 159 ~~G--V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~g------N~rI~~~d~~g~~~~~-~~~~g~ 229 (495)
.++ +..+.... .....|.+|+ ++++|+|||++.. +..|.++++++..+.. ......
T Consensus 119 ~~~~~~~~~~~~~--------------~~~~~~~~i~-~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 183 (333)
T 2dg1_A 119 ENGDNLQDIIEDL--------------STAYCIDDMV-FDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNISV 183 (333)
T ss_dssp TTSCSCEEEECSS--------------SSCCCEEEEE-ECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEESS
T ss_pred CCCCEEEEEEccC--------------ccCCcccceE-ECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecCCCc
Confidence 766 44232110 0124688888 6889999999975 5789999988754432 223346
Q ss_pred cceEEEEecCcCeEEEEEccCCceEEEee
Q 011014 230 HLGIFVLVAAAFFGYMLALLQRRVQAMFS 258 (495)
Q Consensus 230 P~GIAvd~~a~~~~yv~d~~~~Rv~~~~~ 258 (495)
|.+++++.. +..+|+++...++|..+-.
T Consensus 184 ~~~i~~~~d-g~~l~v~~~~~~~i~~~d~ 211 (333)
T 2dg1_A 184 ANGIALSTD-EKVLWVTETTANRLHRIAL 211 (333)
T ss_dssp EEEEEECTT-SSEEEEEEGGGTEEEEEEE
T ss_pred ccceEECCC-CCEEEEEeCCCCeEEEEEe
Confidence 899999862 3468999988888855444
No 65
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=98.74 E-value=3.4e-06 Score=81.92 Aligned_cols=152 Identities=16% Similarity=0.201 Sum_probs=97.6
Q ss_pred CCceEEEEcCCCc-EEEEECCCCeeEEEEcC-CCC--ccccccCCC-cCccccCCcceEEEcCCCC-EEEEEC-CCCEEE
Q 011014 83 MEPFSVAVSPSGE-LLVLDSENNSRPKLVAG-SPE--GYYGHVDGR-PRGARMNHPKGLAVDDRGN-IYIADT-MNMAIR 155 (495)
Q Consensus 83 ~~P~GIAVd~dG~-LyVaDs~n~~ii~ivaG-s~~--g~~G~~dG~-~~~a~f~~P~GIAVD~dGn-IYVAD~-~N~rIr 155 (495)
..|.+++++++|+ |||++..++ .+.++.. +.. .......+. ........|.+++++++|+ |||++. .+++|.
T Consensus 89 ~~~~~~~~s~dg~~l~v~~~~~~-~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~ 167 (353)
T 3vgz_A 89 LKPFGATINNTTQTLWFGNTVNS-AVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIW 167 (353)
T ss_dssp SCCCSEEEETTTTEEEEEETTTT-EEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEE
T ss_pred CCcceEEECCCCCEEEEEecCCC-EEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEE
Confidence 3689999999987 999998777 4444432 221 111110110 0011123488999999987 999994 478899
Q ss_pred EEcCCC---cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCceee---C---CC
Q 011014 156 KISDTG---VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCSD---N---YD 226 (495)
Q Consensus 156 k~d~~G---V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~gN~rI~~~d~~g~~~~~---~---~~ 226 (495)
++|... +.++... -..|.++++......||+++. ++.|..+++....+.. . ..
T Consensus 168 ~~d~~~~~~~~~~~~~-----------------~~~~~~~~~s~dg~~l~~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~ 229 (353)
T 3vgz_A 168 VVDGGNIKLKTAIQNT-----------------GKMSTGLALDSEGKRLYTTNA-DGELITIDTADNKILSRKKLLDDGK 229 (353)
T ss_dssp EEETTTTEEEEEECCC-----------------CTTCCCCEEETTTTEEEEECT-TSEEEEEETTTTEEEEEEECCCSSS
T ss_pred EEcCCCCceEEEecCC-----------------CCccceEEECCCCCEEEEEcC-CCeEEEEECCCCeEEEEEEcCCCCC
Confidence 999654 3333100 124677885445556888876 6889999988766542 1 12
Q ss_pred CCCcceEEEEecCcCeEEEEEccCCceE
Q 011014 227 DTFHLGIFVLVAAAFFGYMLALLQRRVQ 254 (495)
Q Consensus 227 ~g~P~GIAvd~~a~~~~yv~d~~~~Rv~ 254 (495)
...+.+++++.. +..+|+++...+.|.
T Consensus 230 ~~~~~~~~~s~d-g~~l~~~~~~~~~v~ 256 (353)
T 3vgz_A 230 EHFFINISLDTA-RQRAFITDSKAAEVL 256 (353)
T ss_dssp CCCEEEEEEETT-TTEEEEEESSSSEEE
T ss_pred CcccceEEECCC-CCEEEEEeCCCCEEE
Confidence 335788999863 456899998888884
No 66
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=98.73 E-value=3e-07 Score=93.71 Aligned_cols=167 Identities=10% Similarity=-0.019 Sum_probs=104.1
Q ss_pred CCceEEEeecCCCCCCCceEEEEcCCCc-EEEEECCCCeeEEEEcCCCCc--cccccCCCcCccccCCcceEEEcC----
Q 011014 68 GGYTVETVFEGSKFGMEPFSVAVSPSGE-LLVLDSENNSRPKLVAGSPEG--YYGHVDGRPRGARMNHPKGLAVDD---- 140 (495)
Q Consensus 68 ~G~~~~~~~~G~~~~~~P~GIAVd~dG~-LyVaDs~n~~ii~ivaGs~~g--~~G~~dG~~~~a~f~~P~GIAVD~---- 140 (495)
+|+.++....+ +..|.+|+++++|+ |||++.. . .+.++...... ...... .........|.|||+++
T Consensus 6 ~g~~~~~va~~---l~~P~~i~~~pdG~~l~V~e~~-G-~i~~~~~~g~~~~~~~~~~-~v~~~g~~g~~gia~~pdf~~ 79 (353)
T 2g8s_A 6 ATVNVEVLQDK---LDHPWALAFLPDNHGMLITLRG-G-ELRHWQAGKGLSAPLSGVP-DVWAHGQGGLLDVVLAPDFAQ 79 (353)
T ss_dssp CCSEEEEEEEE---ESSEEEEEECSTTCCEEEEETT-T-EEEEEETTTEECCCCBSCC-CCCCSTTCSEEEEEECTTHHH
T ss_pred CCcEEEEEECC---CCCcEEEEEcCCCCEEEEEeCC-c-eEEEEeCCCceeeEecCCc-ccccCCCCCceeEEECCCCCC
Confidence 45555544432 45899999999999 9999985 3 45554322100 011000 01112235678999998
Q ss_pred CCCEEEEECC-------CCEEEEEcCCC-------cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEEC
Q 011014 141 RGNIYIADTM-------NMAIRKISDTG-------VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDR 206 (495)
Q Consensus 141 dGnIYVAD~~-------N~rIrk~d~~G-------V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~ 206 (495)
+|.|||+++. .++|.+++.++ ..++.-+. +........+.+|+ ++++|.|||+..
T Consensus 80 ~g~lYv~~~~~~~~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~----------p~~~~~~h~~~~l~-~~pdG~Lyv~~G 148 (353)
T 2g8s_A 80 SRRIWLSYSEVGDDGKAGTAVGYGRLSDDLSKVTDFRTVFRQM----------PKLSTGNHFGGRLV-FDGKGYLFIALG 148 (353)
T ss_dssp HCEEEEEEEEECSSSCEEEEEEEEEECTTSSBEEEEEEEEECS----------SCCBSSSCCCCCEE-ECSSSEEEEEEC
T ss_pred CCEEEEEEeCCCCCCCceeEEEEEEECCCCCCCCceEEEEEEC----------CCCCCCcccCccEE-ECCCCcEEEEEC
Confidence 5899999875 56898887321 12221110 00112345678888 789999999963
Q ss_pred C-------------CCeEEEEECCCCce--------------eeCCCCCCcceEEEEecCcCeEEEEEccCCc
Q 011014 207 G-------------NQAIREIQLHDDDC--------------SDNYDDTFHLGIFVLVAAAFFGYMLALLQRR 252 (495)
Q Consensus 207 g-------------N~rI~~~d~~g~~~--------------~~~~~~g~P~GIAvd~~a~~~~yv~d~~~~R 252 (495)
. .++|.+|+++|... .+..+...|.|+++|.. .+.+|+++...+.
T Consensus 149 d~~~~~~~q~~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~rnp~gl~~d~~-~g~l~~~d~g~~~ 220 (353)
T 2g8s_A 149 ENNQRPTAQDLDKLQGKLVRLTDQGEIPDDNPFIKESGVRAEIWSYGIRNPQGMAMNPW-SNALWLNEHGPRG 220 (353)
T ss_dssp CTTCGGGGGCTTSCTTEEEEEETTSCCCTTCTTTTSTTSCTTEEEECCSEEEEEEEETT-TTEEEEEEECSBS
T ss_pred CCCCCCccCCCCCCCeEEEEECCCCCCCCCCCCcCCCCCCccEEEEcCcCccceEEECC-CCCEEEEecCCCC
Confidence 3 35899999998621 12233345999999963 4689999987653
No 67
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=98.71 E-value=6.1e-07 Score=92.20 Aligned_cols=156 Identities=16% Similarity=0.096 Sum_probs=100.5
Q ss_pred CCCceEEEEcCCCcEEEEECCCCeeEEEEcCCCCc-cccccCCCcCccccCCcceEEEcC----CCCEEEEEC--CCCEE
Q 011014 82 GMEPFSVAVSPSGELLVLDSENNSRPKLVAGSPEG-YYGHVDGRPRGARMNHPKGLAVDD----RGNIYIADT--MNMAI 154 (495)
Q Consensus 82 ~~~P~GIAVd~dG~LyVaDs~n~~ii~ivaGs~~g-~~G~~dG~~~~a~f~~P~GIAVD~----dGnIYVAD~--~N~rI 154 (495)
+..|++|++.+||.|||++....++..+-...... ....... ........|.|||+++ +|.|||+.+ ..++|
T Consensus 31 L~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~-v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v 109 (347)
T 3das_A 31 LNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPG-VSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRI 109 (347)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTT-CCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEE
T ss_pred CCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCc-eeecCCCCceeeEeccccccCCEEEEEEecCCCCEE
Confidence 34899999999999999998555344432222111 0110010 1122456789999997 488999865 46789
Q ss_pred EEEcCCC----------cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEE-------------CCCCeE
Q 011014 155 RKISDTG----------VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVID-------------RGNQAI 211 (495)
Q Consensus 155 rk~d~~G----------V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD-------------~gN~rI 211 (495)
.++..++ ..++.-+.. . ........|+ ++.+|.|||+. ...++|
T Consensus 110 ~R~~~~~~~~~~~~~~~~~~i~~~~p----------~--~~~H~g~~l~-fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~I 176 (347)
T 3das_A 110 VRMLYDEKKPSGEQLGAPDTVFRGIP----------K--GVIHNGGRIA-FGPDKMLYAGTGESGDTGLSQDRKSLGGKI 176 (347)
T ss_dssp EEEEBCTTSCTTCCBCCCEEEEEEEC----------C--CSSCCCCCEE-ECTTSCEEEECBCTTCGGGTTCTTCSTTCE
T ss_pred EEEEeCCCCcccccCCCcEEEEEcCC----------C--CCCccCcccc-CCCCCCEEEEECCCCCCccccCCCCCCCEE
Confidence 9987332 222221100 0 1234566788 79999999994 235899
Q ss_pred EEEECCCCce---------eeCCCCCCcceEEEEecCcCeEEEEEccCCce
Q 011014 212 REIQLHDDDC---------SDNYDDTFHLGIFVLVAAAFFGYMLALLQRRV 253 (495)
Q Consensus 212 ~~~d~~g~~~---------~~~~~~g~P~GIAvd~~a~~~~yv~d~~~~Rv 253 (495)
.+|+++|... .+..+...|.|++++. .+.+|+++......
T Consensus 177 lRi~~dG~ip~~nPf~~~~i~a~G~RNp~Gla~dp--~G~L~~~d~g~~~~ 225 (347)
T 3das_A 177 LRMTPDGEPAPGNPFPGSPVYSYGHRNVQGLAWDD--KQRLFASEFGQDTW 225 (347)
T ss_dssp EEECTTSSBCTTCSSTTCCEEEBCCSBCCEEEECT--TCCEEEEECCSSSC
T ss_pred EEEeCCCCccCCCCCCCCeEEeeCCCCcceEEECC--CCCEEEEecCCCCC
Confidence 9999998621 2334445699999997 47899999876553
No 68
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=98.65 E-value=5.5e-07 Score=95.31 Aligned_cols=169 Identities=11% Similarity=0.062 Sum_probs=106.2
Q ss_pred cCCceEEEeecCCCCCCCceEEEEcCCCcEEEEECCCCeeEEEEcCCCCc-cc-cccCCCcCccccCCcceEEEcC----
Q 011014 67 EGGYTVETVFEGSKFGMEPFSVAVSPSGELLVLDSENNSRPKLVAGSPEG-YY-GHVDGRPRGARMNHPKGLAVDD---- 140 (495)
Q Consensus 67 ~~G~~~~~~~~G~~~~~~P~GIAVd~dG~LyVaDs~n~~ii~ivaGs~~g-~~-G~~dG~~~~a~f~~P~GIAVD~---- 140 (495)
..++.++....+ +..|++|+++++|.|||++....++..+....... .. ...+..........+.|||+++
T Consensus 14 ~~gf~~~~~a~~---l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~ 90 (454)
T 1cru_A 14 SENFDKKVILSN---LNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKN 90 (454)
T ss_dssp CTTSCEEEEECC---CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTT
T ss_pred CCCeEEEEEECC---CCCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCc
Confidence 445666655543 45899999999999999998765344443222111 01 1101000001234566999998
Q ss_pred CCCEEEEECC------------CCEEEEEcCC---C-c---EEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeE
Q 011014 141 RGNIYIADTM------------NMAIRKISDT---G-V---TTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSL 201 (495)
Q Consensus 141 dGnIYVAD~~------------N~rIrk~d~~---G-V---~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~L 201 (495)
+|.|||+++. .++|.+++.+ + + .++.-+.. ......+.+|+ ++.+|.|
T Consensus 91 ~g~lYv~~s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p------------~~~~H~~~~l~-f~pDG~L 157 (454)
T 1cru_A 91 NPYIYISGTFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLP------------SSKDHQSGRLV-IGPDQKI 157 (454)
T ss_dssp SCEEEEEEEEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEEC------------CCSSCCEEEEE-ECTTSCE
T ss_pred CCEEEEEEeccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCC------------CCCCCCCCeEe-ECCCCeE
Confidence 7889999974 4689988732 1 1 22321100 01245688898 7999999
Q ss_pred EEEEC--C------------------------------CCeEEEEECCCCc------------eeeCCCCCCcceEEEEe
Q 011014 202 LVIDR--G------------------------------NQAIREIQLHDDD------------CSDNYDDTFHLGIFVLV 237 (495)
Q Consensus 202 yVaD~--g------------------------------N~rI~~~d~~g~~------------~~~~~~~g~P~GIAvd~ 237 (495)
||+.. + ..+|.+|+++|.. -.+..+...|.|++++.
T Consensus 158 yv~~Gd~~~~~~~~~~~~~~~~~~p~~~~~~aq~~~~~~G~IlRi~~dG~ip~~Npf~~~~~~ei~a~G~RNp~gla~dp 237 (454)
T 1cru_A 158 YYTIGDQGRNQLAYLFLPNQAQHTPTQQELNGKDYHTYMGKVLRLNLDGSIPKDNPSFNGVVSHIYTLGHRNPQGLAFTP 237 (454)
T ss_dssp EEEECCTTTTSGGGTTSCCCTTCCCCHHHHHTTCCTTCSSEEEEECTTSCCCTTCCEETTEECSEEEBCCSEEEEEEECT
T ss_pred EEEECCCCCCCccccccccccccccccccccccCCCCCCeeEEEEeCCCCCCCCCCCCCCCcceEEEECCCCcceEEECC
Confidence 99843 2 3689999999862 12234445699999997
Q ss_pred cCcCeEEEEEccCCce
Q 011014 238 AAAFFGYMLALLQRRV 253 (495)
Q Consensus 238 ~a~~~~yv~d~~~~Rv 253 (495)
.+.+|+++......
T Consensus 238 --~G~L~~~d~g~~~~ 251 (454)
T 1cru_A 238 --NGKLLQSEQGPNSD 251 (454)
T ss_dssp --TSCEEEEEECSSSC
T ss_pred --CCCEEEEecCCCCC
Confidence 47899999876533
No 69
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.61 E-value=1.7e-06 Score=86.08 Aligned_cols=146 Identities=13% Similarity=0.049 Sum_probs=98.0
Q ss_pred CCceEEEEcCCCcEEEEECCC-----CeeEEEEcCCCCccccccCCCcCccccCCcceEEEcCCCC-EEEEECCCCEEEE
Q 011014 83 MEPFSVAVSPSGELLVLDSEN-----NSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGN-IYIADTMNMAIRK 156 (495)
Q Consensus 83 ~~P~GIAVd~dG~LyVaDs~n-----~~ii~ivaGs~~g~~G~~dG~~~~a~f~~P~GIAVD~dGn-IYVAD~~N~rIrk 156 (495)
..+.++++|++|++||++... ...+..+. . +..-. ....+..|.+|+++++|+ |||+|+.+++|.+
T Consensus 134 ~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~-~--g~~~~-----~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~ 205 (326)
T 2ghs_A 134 NRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA-K--GKVTK-----LFADISIPNSICFSPDGTTGYFVDTKVNRLMR 205 (326)
T ss_dssp EEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE-T--TEEEE-----EEEEESSEEEEEECTTSCEEEEEETTTCEEEE
T ss_pred CCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe-C--CcEEE-----eeCCCcccCCeEEcCCCCEEEEEECCCCEEEE
Confidence 468899999999999998632 12333333 2 11110 011345688999999996 9999999999999
Q ss_pred EcC---CC-c----EEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCceeeCC-CC
Q 011014 157 ISD---TG-V----TTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCSDNY-DD 227 (495)
Q Consensus 157 ~d~---~G-V----~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~gN~rI~~~d~~g~~~~~~~-~~ 227 (495)
++. +| . ..+.... .....|.+++ +|.+|+|||++.++++|.++++++....... ..
T Consensus 206 ~d~~~~~Gl~~~~~~~~~~~~--------------~~~~~p~gi~-~d~~G~lwva~~~~~~v~~~d~~g~~~~~i~~~~ 270 (326)
T 2ghs_A 206 VPLDARTGLPTGKAEVFIDST--------------GIKGGMDGSV-CDAEGHIWNARWGEGAVDRYDTDGNHIARYEVPG 270 (326)
T ss_dssp EEBCTTTCCBSSCCEEEEECT--------------TSSSEEEEEE-ECTTSCEEEEEETTTEEEEECTTCCEEEEEECSC
T ss_pred EEcccccCCcccCceEEEECC--------------CCCCCCCeeE-ECCCCCEEEEEeCCCEEEEECCCCCEEEEEECCC
Confidence 984 34 1 1221100 0113577888 7999999999998899999999887654432 22
Q ss_pred CCcceEEEEecCcCeEEEEEccCC
Q 011014 228 TFHLGIFVLVAAAFFGYMLALLQR 251 (495)
Q Consensus 228 g~P~GIAvd~~a~~~~yv~d~~~~ 251 (495)
..|.+++++...+..+||+.....
T Consensus 271 ~~~~~~af~g~d~~~L~vt~~~~~ 294 (326)
T 2ghs_A 271 KQTTCPAFIGPDASRLLVTSAREH 294 (326)
T ss_dssp SBEEEEEEESTTSCEEEEEEBCTT
T ss_pred CCcEEEEEecCCCCEEEEEecCCC
Confidence 358888887333457888876553
No 70
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.60 E-value=1e-06 Score=87.68 Aligned_cols=148 Identities=10% Similarity=0.016 Sum_probs=98.6
Q ss_pred CCceEEEEcCCCcEEEEECCCCeeEEEEcCCCC-ccccccCCCcCccccCCcceEEEcCCCCEEEEECC------CCEEE
Q 011014 83 MEPFSVAVSPSGELLVLDSENNSRPKLVAGSPE-GYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTM------NMAIR 155 (495)
Q Consensus 83 ~~P~GIAVd~dG~LyVaDs~n~~ii~ivaGs~~-g~~G~~dG~~~~a~f~~P~GIAVD~dGnIYVAD~~------N~rIr 155 (495)
..|.+|+++++|++||+.. +++..+-..+.. ....... .....+.|.++++|++|+|||++.. ..+|.
T Consensus 90 ~~v~~i~~~~dg~l~v~~~--~gl~~~d~~~g~~~~~~~~~---~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~ 164 (326)
T 2ghs_A 90 FMGSALAKISDSKQLIASD--DGLFLRDTATGVLTLHAELE---SDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIY 164 (326)
T ss_dssp SCEEEEEEEETTEEEEEET--TEEEEEETTTCCEEEEECSS---TTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEE
T ss_pred CcceEEEEeCCCeEEEEEC--CCEEEEECCCCcEEEEeeCC---CCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEE
Confidence 3689999999999999973 333333221211 0111000 0112456889999999999999863 46899
Q ss_pred EEcCCC-cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCC-eEEEEECCCCeEEEEECC--CC-ce-----e-e-
Q 011014 156 KISDTG-VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSC-SLLVIDRGNQAIREIQLH--DD-DC-----S-D- 223 (495)
Q Consensus 156 k~d~~G-V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G-~LyVaD~gN~rI~~~d~~--g~-~~-----~-~- 223 (495)
+++ +| +..+.. .+..|++++ .+.+| .|||+|..+++|.+++.+ +. .+ . .
T Consensus 165 ~~~-~g~~~~~~~-----------------~~~~~~~i~-~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~ 225 (326)
T 2ghs_A 165 HVA-KGKVTKLFA-----------------DISIPNSIC-FSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDS 225 (326)
T ss_dssp EEE-TTEEEEEEE-----------------EESSEEEEE-ECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEEC
T ss_pred EEe-CCcEEEeeC-----------------CCcccCCeE-EcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEEC
Confidence 998 67 433321 123577888 56666 699999999999999975 32 21 1 1
Q ss_pred CCCCCCcceEEEEecCcCeEEEEEccCCceEEE
Q 011014 224 NYDDTFHLGIFVLVAAAFFGYMLALLQRRVQAM 256 (495)
Q Consensus 224 ~~~~g~P~GIAvd~~a~~~~yv~d~~~~Rv~~~ 256 (495)
....+.|.|+++|. .+++||+...+++|..+
T Consensus 226 ~~~~~~p~gi~~d~--~G~lwva~~~~~~v~~~ 256 (326)
T 2ghs_A 226 TGIKGGMDGSVCDA--EGHIWNARWGEGAVDRY 256 (326)
T ss_dssp TTSSSEEEEEEECT--TSCEEEEEETTTEEEEE
T ss_pred CCCCCCCCeeEECC--CCCEEEEEeCCCEEEEE
Confidence 22346799999996 56899999888888544
No 71
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=98.59 E-value=2.6e-06 Score=83.61 Aligned_cols=165 Identities=16% Similarity=0.137 Sum_probs=104.5
Q ss_pred CCceEEEEcCCCcEEEEECC-CCeeEEEEcC-CCC-ccccccCCCcCccccCCcceEEEcCCCC-EEEEECCCCEEEEEc
Q 011014 83 MEPFSVAVSPSGELLVLDSE-NNSRPKLVAG-SPE-GYYGHVDGRPRGARMNHPKGLAVDDRGN-IYIADTMNMAIRKIS 158 (495)
Q Consensus 83 ~~P~GIAVd~dG~LyVaDs~-n~~ii~ivaG-s~~-g~~G~~dG~~~~a~f~~P~GIAVD~dGn-IYVAD~~N~rIrk~d 158 (495)
..|.+|++++||.||+++.. ....+.++.- ... ..... .......|.+|+++++|+ ||+++..++.|.+++
T Consensus 40 ~~p~~~a~spdg~l~~~~~~~~~~~v~~~~~~~g~~~~~~~-----~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~ 114 (347)
T 3hfq_A 40 QNPTYLALSAKDCLYSVDKEDDEGGIAAWQIDGQTAHKLNT-----VVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMK 114 (347)
T ss_dssp SCCCCEEECTTCEEEEEEEETTEEEEEEEEEETTEEEEEEE-----EEEESCCCSEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred CCcceEEEccCCeEEEEEecCCCceEEEEEecCCcEEEeee-----eecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEE
Confidence 47999999999999999863 2334444321 110 01110 011245799999999998 999998888888888
Q ss_pred --CCC-cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECCCCeEEEEECC-CCceee-----CCCCCC
Q 011014 159 --DTG-VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLH-DDDCSD-----NYDDTF 229 (495)
Q Consensus 159 --~~G-V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~gN~rI~~~d~~-g~~~~~-----~~~~g~ 229 (495)
.+| ...+..... .+ .++........|.+++ ++++|.||+++.++++|+.++++ +..+.. ......
T Consensus 115 ~~~~g~~~~~~~~~~---~~--~~p~~~~~~~~~~~~~-~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~ 188 (347)
T 3hfq_A 115 IAADGALTLTDTVQH---SG--HGPRPEQDGSHIHYTD-LTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFG 188 (347)
T ss_dssp ECTTSCEEEEEEEEC---CC--CCSSTTCSSCCEEEEE-ECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCC
T ss_pred eCCCCCeeecceeec---CC--CCCCccccCCCceEEE-ECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCC
Confidence 445 332221100 00 0111122345678888 67888899999999999999987 332221 222235
Q ss_pred cceEEEEecCcCeEEEEEccCCceEEEeeC
Q 011014 230 HLGIFVLVAAAFFGYMLALLQRRVQAMFSS 259 (495)
Q Consensus 230 P~GIAvd~~a~~~~yv~d~~~~Rv~~~~~s 259 (495)
|.+++++.. +..+|+++...++|......
T Consensus 189 p~~~~~spd-g~~l~v~~~~~~~v~v~~~~ 217 (347)
T 3hfq_A 189 PRHLVFSPD-GQYAFLAGELSSQIASLKYD 217 (347)
T ss_dssp EEEEEECTT-SSEEEEEETTTTEEEEEEEE
T ss_pred CceEEECCC-CCEEEEEeCCCCEEEEEEec
Confidence 888999862 34689999988888544433
No 72
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=98.58 E-value=1.2e-06 Score=86.10 Aligned_cols=161 Identities=14% Similarity=0.135 Sum_probs=100.4
Q ss_pred CceEEEEcCCCcEEEEECCCCeeEEEEcCCCCccccccCCCcCccccCCcceEEEcCCCC-EEEEECCCCEEEEEcC---
Q 011014 84 EPFSVAVSPSGELLVLDSENNSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGN-IYIADTMNMAIRKISD--- 159 (495)
Q Consensus 84 ~P~GIAVd~dG~LyVaDs~n~~ii~ivaGs~~g~~G~~dG~~~~a~f~~P~GIAVD~dGn-IYVAD~~N~rIrk~d~--- 159 (495)
.|.+++++++|+||+++..++ .+.++.-...+....... .....-..|.+|+++++|+ |||++..+++|.+++.
T Consensus 142 ~~~~~~~spdg~l~v~~~~~~-~v~~~~~~~~g~~~~~~~-~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~ 219 (347)
T 3hfq_A 142 HIHYTDLTPDNRLAVIDLGSD-KVYVYNVSDAGQLSEQSV-LTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQ 219 (347)
T ss_dssp CEEEEEECTTSCEEEEETTTT-EEEEEEECTTSCEEEEEE-EECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETT
T ss_pred CceEEEECCCCcEEEEeCCCC-EEEEEEECCCCcEEEeee-EEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCC
Confidence 478899999999999998877 344332111111110000 0000123688999999998 9999999999988873
Q ss_pred CC-cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCe-EEEEECCCCeEEEEECCCC-c---eeeC-CCCCCcce
Q 011014 160 TG-VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCS-LLVIDRGNQAIREIQLHDD-D---CSDN-YDDTFHLG 232 (495)
Q Consensus 160 ~G-V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~-LyVaD~gN~rI~~~d~~g~-~---~~~~-~~~g~P~G 232 (495)
+| +..+...... . ........|.+++ ++++|. |||++..++.|.+++++.. . +... .....|.+
T Consensus 220 ~g~~~~~~~~~~~--~------~~~~~~~~~~~i~-~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~ 290 (347)
T 3hfq_A 220 TGAFTQLGIVKTI--P------ADYTAHNGAAAIR-LSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRD 290 (347)
T ss_dssp TTEEEEEEEEESS--C------TTCCSCCEEEEEE-ECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCE
T ss_pred CCceEEeeeeeec--C------CCCCCCCcceeEE-ECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCe
Confidence 35 2222110000 0 0011124688898 577775 8999999999999998632 1 1122 22346999
Q ss_pred EEEEecCcCeEEEEEccCCceEEE
Q 011014 233 IFVLVAAAFFGYMLALLQRRVQAM 256 (495)
Q Consensus 233 IAvd~~a~~~~yv~d~~~~Rv~~~ 256 (495)
++++. .+..+|+++...++|...
T Consensus 291 ~~~sp-dg~~l~v~~~~~~~v~v~ 313 (347)
T 3hfq_A 291 FDLDP-TEAFVVVVNQNTDNATLY 313 (347)
T ss_dssp EEECT-TSSEEEEEETTTTEEEEE
T ss_pred EEECC-CCCEEEEEEcCCCcEEEE
Confidence 99986 345789999988888433
No 73
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.46 E-value=2.1e-06 Score=87.67 Aligned_cols=166 Identities=10% Similarity=-0.004 Sum_probs=104.4
Q ss_pred CCceEEEEcC-CCcEEEEECCCCeeEEEEcCCC-CccccccCCCc-CccccCCcceEEE---cCCCCEEE-EEC------
Q 011014 83 MEPFSVAVSP-SGELLVLDSENNSRPKLVAGSP-EGYYGHVDGRP-RGARMNHPKGLAV---DDRGNIYI-ADT------ 149 (495)
Q Consensus 83 ~~P~GIAVd~-dG~LyVaDs~n~~ii~ivaGs~-~g~~G~~dG~~-~~a~f~~P~GIAV---D~dGnIYV-AD~------ 149 (495)
..|.+++.|+ +|.+||++-.+..+..+-.... .-.. ..++.. ......+|.||.+ |++|.|+| +|.
T Consensus 13 ~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~-~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~ 91 (334)
T 2p9w_A 13 LTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNV-VIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNF 91 (334)
T ss_dssp CCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEE-CCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCT
T ss_pred cCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEE-ecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccc
Confidence 4799999986 7889999988885655533211 0011 111100 0112346789999 78999998 663
Q ss_pred ------CCCEEEEEcCC----C--cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECCC-CeEEEEEC
Q 011014 150 ------MNMAIRKISDT----G--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGN-QAIREIQL 216 (495)
Q Consensus 150 ------~N~rIrk~d~~----G--V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~gN-~rI~~~d~ 216 (495)
+.+.|.+||.+ | +..+ ....-. .+.. ......+..+.+|+ +|.+|++||+|... ..|.++++
T Consensus 92 ~g~~~~g~~~v~~~Dl~~~~tg~~~~~~-dL~~~~-~~~~--~~~g~~~~~~nDva-vD~~GnaYVt~s~~~~~I~rV~p 166 (334)
T 2p9w_A 92 ADQSSHGASSFHSFNLPLSENSKPVWSV-NFEKVQ-DEFE--KKAGKRPFGVVQSA-QDRDGNSYVAFALGMPAIARVSA 166 (334)
T ss_dssp TSCCSSSCCEEEEEESSCCTTCCCSEEE-ESHHHH-HHHH--HHHSSCCEEEEEEE-ECTTSCEEEEEEESSCEEEEECT
T ss_pred cccccCCCCEEEEEcCCcCCCCCEEEEe-cCcccc-cccc--ccccccccCCceeE-ECCCCCEEEeCCCCCCeEEEEeC
Confidence 46889999955 5 3332 210000 0000 00001244688999 79999999999999 99999999
Q ss_pred CCCceee---CCC----CCCcceEEEEecCcCeEEEEEccCCceEEE
Q 011014 217 HDDDCSD---NYD----DTFHLGIFVLVAAAFFGYMLALLQRRVQAM 256 (495)
Q Consensus 217 ~g~~~~~---~~~----~g~P~GIAvd~~a~~~~yv~d~~~~Rv~~~ 256 (495)
+|..... ... .-.+.||++... +..+++.+. .+|+.++
T Consensus 167 dG~~~~~~~~~~~~~~~~~G~nGIv~~pd-g~~Liv~~~-~g~L~~f 211 (334)
T 2p9w_A 167 DGKTVSTFAWESGNGGQRPGYSGITFDPH-SNKLIAFGG-PRALTAF 211 (334)
T ss_dssp TSCCEEEEEECCCCSSSCCSCSEEEEETT-TTEEEEESS-SSSEEEE
T ss_pred CCCEEeeeeecCCCcccccCcceEEEeCC-CCEEEEEcC-CCeEEEE
Confidence 9985542 111 113789999962 456777777 8999433
No 74
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=98.44 E-value=6e-05 Score=73.07 Aligned_cols=150 Identities=11% Similarity=0.103 Sum_probs=98.5
Q ss_pred ceEEEEcCCCc-EEEEECCCCeeEEEEcCCCCccccccCCCcCccccCCcceEEEcCCCC-EEEEECCCCEEEEEcCC-C
Q 011014 85 PFSVAVSPSGE-LLVLDSENNSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGN-IYIADTMNMAIRKISDT-G 161 (495)
Q Consensus 85 P~GIAVd~dG~-LyVaDs~n~~ii~ivaGs~~g~~G~~dG~~~~a~f~~P~GIAVD~dGn-IYVAD~~N~rIrk~d~~-G 161 (495)
|.+++++++|+ ||+++......+.++............. .-..|.+++++++|+ ||+++. ++.|.++|.. +
T Consensus 143 ~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~-----~~~~~~~~~~s~dg~~l~~~~~-~~~i~~~d~~~~ 216 (353)
T 3vgz_A 143 PRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQN-----TGKMSTGLALDSEGKRLYTTNA-DGELITIDTADN 216 (353)
T ss_dssp EEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECC-----CCTTCCCCEEETTTTEEEEECT-TSEEEEEETTTT
T ss_pred CceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecC-----CCCccceEEECCCCCEEEEEcC-CCeEEEEECCCC
Confidence 89999999887 8999854343555554322111111110 113588999999987 888876 7899999954 4
Q ss_pred --cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCceeeCCCCCCcceEEEEecC
Q 011014 162 --VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCSDNYDDTFHLGIFVLVAA 239 (495)
Q Consensus 162 --V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~gN~rI~~~d~~g~~~~~~~~~g~P~GIAvd~~a 239 (495)
+..+..+.. .....|.++++..+.+.||+++..++.|.++++....+......+.|.+++++..
T Consensus 217 ~~~~~~~~~~~-------------~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~s~d- 282 (353)
T 3vgz_A 217 KILSRKKLLDD-------------GKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPESLAVLFNPA- 282 (353)
T ss_dssp EEEEEEECCCS-------------SSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSSCCCEEEETT-
T ss_pred eEEEEEEcCCC-------------CCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCceEEECCC-
Confidence 333322111 1123577788555555699999999999999997766543323345788888763
Q ss_pred cCeEEEEEccCCceE
Q 011014 240 AFFGYMLALLQRRVQ 254 (495)
Q Consensus 240 ~~~~yv~d~~~~Rv~ 254 (495)
+..+|+++...++|.
T Consensus 283 g~~l~v~~~~~~~v~ 297 (353)
T 3vgz_A 283 RNEAYVTHRQAGKVS 297 (353)
T ss_dssp TTEEEEEETTTTEEE
T ss_pred CCEEEEEECCCCeEE
Confidence 346899998888884
No 75
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=98.40 E-value=3.2e-06 Score=86.03 Aligned_cols=173 Identities=10% Similarity=0.059 Sum_probs=101.4
Q ss_pred CCceEEEEcCCCcEEEEECCC-------------CeeEEEEc-CCC-Cc--ccccc--CCCcCccccCCcceEEEcC-CC
Q 011014 83 MEPFSVAVSPSGELLVLDSEN-------------NSRPKLVA-GSP-EG--YYGHV--DGRPRGARMNHPKGLAVDD-RG 142 (495)
Q Consensus 83 ~~P~GIAVd~dG~LyVaDs~n-------------~~ii~iva-Gs~-~g--~~G~~--dG~~~~a~f~~P~GIAVD~-dG 142 (495)
..|.+|++++||.|||+.... .+++++-. |+. .+ ..+.. ....-...+.+|.||++|+ +|
T Consensus 130 h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~rnp~gl~~d~~~g 209 (353)
T 2g8s_A 130 HFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEIPDDNPFIKESGVRAEIWSYGIRNPQGMAMNPWSN 209 (353)
T ss_dssp CCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCCCTTCTTTTSTTSCTTEEEECCSEEEEEEEETTTT
T ss_pred ccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCCCCCCCCcCCCCCCccEEEEcCcCccceEEECCCC
Confidence 458899999999999997432 24555532 221 00 00000 0011123578899999999 89
Q ss_pred CEEEEECCCC---EEEEEcCCCcE---EEecCcc--cCCCC-----CCCCCCc-C---cccCCCceEEEECC------CC
Q 011014 143 NIYIADTMNM---AIRKISDTGVT---TIAGGKW--SRGVG-----HVDGPSE-D---AKFSNDFDVVYVGS------SC 199 (495)
Q Consensus 143 nIYVAD~~N~---rIrk~d~~GV~---tiaGg~~--G~~~g-----~~dG~~~-~---a~f~~P~gVa~vd~------~G 199 (495)
+||++|.+.+ +|.++...+-. .+.++.. +.... ...+... . .....|.++++... +|
T Consensus 210 ~l~~~d~g~~~~dei~~i~~G~nyGwp~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~ap~G~~~y~g~~fp~~~g 289 (353)
T 2g8s_A 210 ALWLNEHGPRGGDEINIPQKGKNYGWPLATWGINYSGFKIPEAKGEIVAGTEQPVFYWKDSPAVSGMAFYNSDKFPQWQQ 289 (353)
T ss_dssp EEEEEEECSBSCEEEECCCTTCBCCTTTBCSSBCTTSSCCTTCCBSSCTTSCCCSEEESSCCCEEEEEEECCSSSGGGTT
T ss_pred CEEEEecCCCCCcEEeEeccCCcCCCCCccCCCCCCCCccCcccCCCCCCccCCeEEeCCCcCcceeEEECCccCcccCC
Confidence 9999998753 56665543310 0011100 00000 0000000 0 00136888885432 58
Q ss_pred eEEEEECCCCeEEEEECCCCcee----eC-CCCCCcceEEEEecCcCeEEEE-EccCCceEEEe
Q 011014 200 SLLVIDRGNQAIREIQLHDDDCS----DN-YDDTFHLGIFVLVAAAFFGYML-ALLQRRVQAMF 257 (495)
Q Consensus 200 ~LyVaD~gN~rI~~~d~~g~~~~----~~-~~~g~P~GIAvd~~a~~~~yv~-d~~~~Rv~~~~ 257 (495)
.+||+|..+++|.++++++.... .. ...+.|.+|+++. .+.+||+ +..+.||.++.
T Consensus 290 ~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~p--dG~lyv~td~~~g~I~ri~ 351 (353)
T 2g8s_A 290 KLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGP--DGYLYVLTDESSGELLKVS 351 (353)
T ss_dssp EEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEECT--TSCEEEEECSTTEEEEEEE
T ss_pred cEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEECC--CCcEEEEEeCCCCEEEEEe
Confidence 99999999999999999875322 12 2235799999986 5679997 55677776553
No 76
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=98.37 E-value=1.9e-05 Score=78.07 Aligned_cols=162 Identities=10% Similarity=0.115 Sum_probs=100.7
Q ss_pred CceEEEEcCCCc-EEEEECCCCeeEEEEc-CCCCc----c-cccc--CCCcCccccCCcceEEEcCCCC-EEEEECCCCE
Q 011014 84 EPFSVAVSPSGE-LLVLDSENNSRPKLVA-GSPEG----Y-YGHV--DGRPRGARMNHPKGLAVDDRGN-IYIADTMNMA 153 (495)
Q Consensus 84 ~P~GIAVd~dG~-LyVaDs~n~~ii~iva-Gs~~g----~-~G~~--dG~~~~a~f~~P~GIAVD~dGn-IYVAD~~N~r 153 (495)
.|++++++++|+ ||+++..++ .+.++. ....+ . .-.. ........-..|.+++++++|+ |||++..+++
T Consensus 156 ~~~~~~~spdg~~l~~~~~~~~-~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~ 234 (361)
T 3scy_A 156 HLHCVRITPDGKYLLADDLGTD-QIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGT 234 (361)
T ss_dssp CEEEEEECTTSSEEEEEETTTT-EEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCE
T ss_pred cceEEEECCCCCEEEEEeCCCC-EEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCe
Confidence 357899999997 999998777 334332 11111 0 0000 0000011235688999999997 9999988999
Q ss_pred EEEEcC-CC-cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCC-eEEEEECC-CCeEEEEECC--CCc---eeeC
Q 011014 154 IRKISD-TG-VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSC-SLLVIDRG-NQAIREIQLH--DDD---CSDN 224 (495)
Q Consensus 154 Irk~d~-~G-V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G-~LyVaD~g-N~rI~~~d~~--g~~---~~~~ 224 (495)
|.+++. +| +..+..... ....+..|.+|+ ++++| .|||++.+ ++.|..++.+ +.. +...
T Consensus 235 v~v~~~~~g~~~~~~~~~~-----------~~~~~~~~~~i~-~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~ 302 (361)
T 3scy_A 235 VIAFRYADGMLDEIQTVAA-----------DTVNAQGSGDIH-LSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQ 302 (361)
T ss_dssp EEEEEEETTEEEEEEEEES-----------CSSCCCCEEEEE-ECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEE
T ss_pred EEEEEecCCceEEeEEEec-----------CCCCCCCcccEE-ECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEe
Confidence 999984 44 322211100 011245678888 56666 58899998 8899998875 222 2222
Q ss_pred CCCCCcceEEEEecCcCeEEEEEccCCceEEEeeC
Q 011014 225 YDDTFHLGIFVLVAAAFFGYMLALLQRRVQAMFSS 259 (495)
Q Consensus 225 ~~~g~P~GIAvd~~a~~~~yv~d~~~~Rv~~~~~s 259 (495)
.....|.+++++. .+..+|+++...++|.....+
T Consensus 303 ~~g~~~~~~~~sp-dg~~l~~~~~~~~~v~v~~~d 336 (361)
T 3scy_A 303 LTGIHPRNFIITP-NGKYLLVACRDTNVIQIFERD 336 (361)
T ss_dssp ECSSCCCEEEECT-TSCEEEEEETTTTEEEEEEEC
T ss_pred cCCCCCceEEECC-CCCEEEEEECCCCCEEEEEEE
Confidence 2244699999986 345789999888888543333
No 77
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.35 E-value=3.4e-05 Score=76.36 Aligned_cols=154 Identities=12% Similarity=-0.024 Sum_probs=101.4
Q ss_pred CCceEEEEcCCCcEEEEECCCCeeEEEEc-CCCCccccccCCCcCccccCCcceEEEcCCCCEEEEECCCCEEEEEcCCC
Q 011014 83 MEPFSVAVSPSGELLVLDSENNSRPKLVA-GSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMNMAIRKISDTG 161 (495)
Q Consensus 83 ~~P~GIAVd~dG~LyVaDs~n~~ii~iva-Gs~~g~~G~~dG~~~~a~f~~P~GIAVD~dGnIYVAD~~N~rIrk~d~~G 161 (495)
..+.|++++ .+.||+++..++ .+.++. .+. ...+...- . ...+.||+.| .+.|||+| +.++|.++|+..
T Consensus 66 ~fgeGi~~~-g~~lyv~t~~~~-~v~viD~~t~-~v~~~i~~----g-~~~g~glt~D-g~~l~vs~-gs~~l~viD~~t 135 (266)
T 2iwa_A 66 YFGEGLTLL-NEKLYQVVWLKN-IGFIYDRRTL-SNIKNFTH----Q-MKDGWGLATD-GKILYGSD-GTSILYEIDPHT 135 (266)
T ss_dssp CCEEEEEEE-TTEEEEEETTCS-EEEEEETTTT-EEEEEEEC----C-SSSCCEEEEC-SSSEEEEC-SSSEEEEECTTT
T ss_pred cceEEEEEe-CCEEEEEEecCC-EEEEEECCCC-cEEEEEEC----C-CCCeEEEEEC-CCEEEEEC-CCCeEEEEECCC
Confidence 356788887 468999998887 444443 222 11111100 0 1134566655 34699999 688999999766
Q ss_pred ---cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCceee-CC------------
Q 011014 162 ---VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCSD-NY------------ 225 (495)
Q Consensus 162 ---V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~gN~rI~~~d~~g~~~~~-~~------------ 225 (495)
+.++.-+..+ .-+..|+++.+. +|.||++....+.|.+||+....+.. ..
T Consensus 136 ~~v~~~I~Vg~~~------------~p~~~~nele~~--dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~ 201 (266)
T 2iwa_A 136 FKLIKKHNVKYNG------------HRVIRLNELEYI--NGEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEG 201 (266)
T ss_dssp CCEEEEEECEETT------------EECCCEEEEEEE--TTEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTT
T ss_pred CcEEEEEEECCCC------------cccccceeEEEE--CCEEEEecCCCCeEEEEECCCCcEEEEEECCCccccccccc
Confidence 4555322111 124568888865 57999999999999999998866532 11
Q ss_pred --CCCCcceEEEEecCcCeEEEEEccCCceEEEeeCCC
Q 011014 226 --DDTFHLGIFVLVAAAFFGYMLALLQRRVQAMFSSKD 261 (495)
Q Consensus 226 --~~g~P~GIAvd~~a~~~~yv~d~~~~Rv~~~~~s~~ 261 (495)
....|.|||++.+ +..+||+.....+|..+-+...
T Consensus 202 ~~~~~v~nGIa~~~~-~~~lfVTgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 202 FRDIDVLNGIAWDQE-NKRIFVTGKLWPKLFEIKLHLV 238 (266)
T ss_dssp CTTCCCEEEEEEETT-TTEEEEEETTCSEEEEEEEEEC
T ss_pred ccccCceEEEEEcCC-CCEEEEECCCCCeEEEEEEecc
Confidence 1135799999964 4579999999999966655443
No 78
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=98.31 E-value=1.1e-05 Score=83.01 Aligned_cols=115 Identities=10% Similarity=0.062 Sum_probs=80.8
Q ss_pred CCcceEEEcC--CC--CEEEEECC--CCEE--EEEcCCC-cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeE
Q 011014 131 NHPKGLAVDD--RG--NIYIADTM--NMAI--RKISDTG-VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSL 201 (495)
Q Consensus 131 ~~P~GIAVD~--dG--nIYVAD~~--N~rI--rk~d~~G-V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~L 201 (495)
.+|.||.+.. +| +|||+|.. +.+| .+++.++ ..+++..-. ...|+.|++++ ++++|.+
T Consensus 112 f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~------------g~~~~~pND~~-v~~~G~f 178 (355)
T 3sre_A 112 FNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIR------------HKLLPSVNDIV-AVGPEHF 178 (355)
T ss_dssp CCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEEC------------CTTCSSEEEEE-EEETTEE
T ss_pred eeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccc------------cCCCCCCceEE-EeCCCCE
Confidence 4899999955 35 59999987 4554 4555655 444332111 12588999999 6889999
Q ss_pred EEEEC-----------------CCCeEEEEECCCCceeeCCCCCCcceEEEEecCcCeEEEEEccCCceEEEeeCC
Q 011014 202 LVIDR-----------------GNQAIREIQLHDDDCSDNYDDTFHLGIFVLVAAAFFGYMLALLQRRVQAMFSSK 260 (495)
Q Consensus 202 yVaD~-----------------gN~rI~~~d~~g~~~~~~~~~g~P~GIAvd~~a~~~~yv~d~~~~Rv~~~~~s~ 260 (495)
||++. ..++|.++++. .......+..+|.|||+.. .+..+||++...++|.......
T Consensus 179 yvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~-~~~~~~~~l~~pNGia~sp-Dg~~lYvadt~~~~I~~~~~~~ 252 (355)
T 3sre_A 179 YATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPN-DVRVVAEGFDFANGINISP-DGKYVYIAELLAHKIHVYEKHA 252 (355)
T ss_dssp EEEESCSCSSHHHHHHHHHTTCCCEEEEEECTT-CCEEEEEEESSEEEEEECT-TSSEEEEEEGGGTEEEEEEECT
T ss_pred EecCCcEeCCcccccchhhccCCccEEEEEECC-eEEEeecCCcccCcceECC-CCCEEEEEeCCCCeEEEEEECC
Confidence 99875 34689999874 2222244566899999986 3458999999999996665553
No 79
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=98.21 E-value=3.4e-05 Score=74.58 Aligned_cols=155 Identities=14% Similarity=0.144 Sum_probs=97.0
Q ss_pred CCCceEEEEcCCCc-EEEEECCCCeeEEEEcCCCCccccccCCCcCccccCCcceEEEcCCCC-EEEEECCCCEEEEEcC
Q 011014 82 GMEPFSVAVSPSGE-LLVLDSENNSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGN-IYIADTMNMAIRKISD 159 (495)
Q Consensus 82 ~~~P~GIAVd~dG~-LyVaDs~n~~ii~ivaGs~~g~~G~~dG~~~~a~f~~P~GIAVD~dGn-IYVAD~~N~rIrk~d~ 159 (495)
...|.+++++++|+ ||+++...+..+.++.-...+........ ....-..|.+++++++|+ |||++..++.|++++.
T Consensus 127 ~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~ 205 (331)
T 3u4y_A 127 PYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQE-FISGGTRPFNITFTPDGNFAFVANLIGNSIGILET 205 (331)
T ss_dssp CTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEE-EECSSSSEEEEEECTTSSEEEEEETTTTEEEEEEC
T ss_pred CCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCc-cccCCCCccceEECCCCCEEEEEeCCCCeEEEEEC
Confidence 35789999999996 99999876641333321111111000000 001124589999999998 9999999999999995
Q ss_pred C-C-c-EEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCe-EEEEECCCCeEEEEECCCCceee----CCC---CC
Q 011014 160 T-G-V-TTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCS-LLVIDRGNQAIREIQLHDDDCSD----NYD---DT 228 (495)
Q Consensus 160 ~-G-V-~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~-LyVaD~gN~rI~~~d~~g~~~~~----~~~---~g 228 (495)
. + + ..+.--. .-..|.+++ ++++|. |||++.+.+.|.++++.+..+.. ... ..
T Consensus 206 ~~~~~~~~~~~~~---------------~~~~~~~~~-~spdg~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~ 269 (331)
T 3u4y_A 206 QNPENITLLNAVG---------------TNNLPGTIV-VSRDGSTVYVLTESTVDVFNFNQLSGTLSFVKSFGHGLLIDP 269 (331)
T ss_dssp SSTTSCEEEEEEE---------------CSSCCCCEE-ECTTSSEEEEECSSEEEEEEEETTTTEEEEEEEEECCCCCCC
T ss_pred CCCcccceeeecc---------------CCCCCceEE-ECCCCCEEEEEEcCCCEEEEEECCCCceeeecccccccccCC
Confidence 4 3 2 1111000 013677888 566766 89999988999999998766521 111 11
Q ss_pred C----cceEEEEecCcCeEEEEEccCCceE
Q 011014 229 F----HLGIFVLVAAAFFGYMLALLQRRVQ 254 (495)
Q Consensus 229 ~----P~GIAvd~~a~~~~yv~d~~~~Rv~ 254 (495)
. ..++++.. .+..+|+++...+.|.
T Consensus 270 ~~~~~~~~~~~sp-dg~~l~v~~~~~~~v~ 298 (331)
T 3u4y_A 270 RPLFGANQMALNK-TETKLFISANISRELK 298 (331)
T ss_dssp GGGTTCCCEEECT-TSSEEEEEETTTTEEE
T ss_pred CCcccccceEECC-CCCEEEEecCCCCcEE
Confidence 1 13467775 3457889888888883
No 80
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.17 E-value=0.00018 Score=71.22 Aligned_cols=149 Identities=11% Similarity=0.004 Sum_probs=97.8
Q ss_pred ceEEEEcCCCcEEEEECCCCeeEEEEcC-CCCccccccCCCcCccccCCcceEEEcCCCCEEEEECCCCEEEEEcCCC--
Q 011014 85 PFSVAVSPSGELLVLDSENNSRPKLVAG-SPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMNMAIRKISDTG-- 161 (495)
Q Consensus 85 P~GIAVd~dG~LyVaDs~n~~ii~ivaG-s~~g~~G~~dG~~~~a~f~~P~GIAVD~dGnIYVAD~~N~rIrk~d~~G-- 161 (495)
..||+++ ++.||+++..++ .+.+++. +. ...+...-. ..+.|++.| .+.||++|. .++|.++|+..
T Consensus 89 geGit~~-g~~ly~ltw~~~-~v~v~D~~t~-~~~~ti~~~------~eG~glt~d-g~~L~~SdG-s~~i~~iDp~T~~ 157 (262)
T 3nol_A 89 GEGISDW-KDKIVGLTWKNG-LGFVWNIRNL-RQVRSFNYD------GEGWGLTHN-DQYLIMSDG-TPVLRFLDPESLT 157 (262)
T ss_dssp EEEEEEE-TTEEEEEESSSS-EEEEEETTTC-CEEEEEECS------SCCCCEEEC-SSCEEECCS-SSEEEEECTTTCS
T ss_pred eeEEEEe-CCEEEEEEeeCC-EEEEEECccC-cEEEEEECC------CCceEEecC-CCEEEEECC-CCeEEEEcCCCCe
Confidence 4678887 468999998877 4444442 22 111111100 145688877 457999995 89999999765
Q ss_pred -cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCceee---C-----------CC
Q 011014 162 -VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCSD---N-----------YD 226 (495)
Q Consensus 162 -V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~gN~rI~~~d~~g~~~~~---~-----------~~ 226 (495)
+.++.-+..| ..+..++.+.++ +|.||+.....+.|.+||+....+.. . ..
T Consensus 158 v~~~I~V~~~g------------~~~~~lNELe~~--~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~ 223 (262)
T 3nol_A 158 PVRTITVTAHG------------EELPELNELEWV--DGEIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSP 223 (262)
T ss_dssp EEEEEECEETT------------EECCCEEEEEEE--TTEEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSS
T ss_pred EEEEEEeccCC------------ccccccceeEEE--CCEEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCc
Confidence 4555322111 123455667754 67999999999999999998876532 1 11
Q ss_pred CCCcceEEEEecCcCeEEEEEccCCceEEEeeC
Q 011014 227 DTFHLGIFVLVAAAFFGYMLALLQRRVQAMFSS 259 (495)
Q Consensus 227 ~g~P~GIAvd~~a~~~~yv~d~~~~Rv~~~~~s 259 (495)
...|.|||.|.. ...+||+.-+=.++-.+-+.
T Consensus 224 ~~vlNGIA~dp~-~~~lfVTGK~Wp~~~ev~~~ 255 (262)
T 3nol_A 224 IDVLNGIAWDKE-HHRLFVTGKLWPKVFEITLT 255 (262)
T ss_dssp CCCEEEEEEETT-TTEEEEEETTCSEEEEEEEE
T ss_pred CCceEEEEEcCC-CCEEEEECCCCCceEEEEEe
Confidence 235899999974 46899999877777555443
No 81
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=98.14 E-value=0.00013 Score=74.93 Aligned_cols=154 Identities=12% Similarity=0.099 Sum_probs=93.2
Q ss_pred CceEEEEcCCCcEEEEECC-------------CCeeEEEEc-CCCCccccccCCCcCccccCCcceEEEcCCCCEEEEEC
Q 011014 84 EPFSVAVSPSGELLVLDSE-------------NNSRPKLVA-GSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADT 149 (495)
Q Consensus 84 ~P~GIAVd~dG~LyVaDs~-------------n~~ii~iva-Gs~~g~~G~~dG~~~~a~f~~P~GIAVD~dGnIYVAD~ 149 (495)
....|++++||.|||+... ..+++++-. |+...-.-+.+...-...+.+|.||++|++|.||++|.
T Consensus 141 ~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip~~nPf~~~~i~a~G~RNp~Gla~dp~G~L~~~d~ 220 (347)
T 3das_A 141 NGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPAPGNPFPGSPVYSYGHRNVQGLAWDDKQRLFASEF 220 (347)
T ss_dssp CCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBCTTCSSTTCCEEEBCCSBCCEEEECTTCCEEEEEC
T ss_pred cCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCccCCCCCCCCeEEeeCCCCcceEEECCCCCEEEEec
Confidence 4566999999999999432 124455432 22000000001111233578999999999999999998
Q ss_pred CCC---EEEEEcCCCcEEEecCcccCCCCCCCCCC-------cCccc----CCCceEEEECCCCeEEEEECCCCeEEEEE
Q 011014 150 MNM---AIRKISDTGVTTIAGGKWSRGVGHVDGPS-------EDAKF----SNDFDVVYVGSSCSLLVIDRGNQAIREIQ 215 (495)
Q Consensus 150 ~N~---rIrk~d~~GV~tiaGg~~G~~~g~~dG~~-------~~a~f----~~P~gVa~vd~~G~LyVaD~gN~rI~~~d 215 (495)
+.. +|.++...+ ..|- .+..|.. -...+ ..|.|+++. +|.+|+++..+.+|.++.
T Consensus 221 g~~~~deln~i~~G~-------nyGw--P~~~g~~~~~~~~~P~~~~~~~~~ap~G~~~~--~g~~~~~~l~~~~l~~v~ 289 (347)
T 3das_A 221 GQDTWDELNAIKPGD-------NYGW--PEAEGKGGGSGFHDPVAQWSTDEASPSGIAYA--EGSVWMAGLRGERLWRIP 289 (347)
T ss_dssp CSSSCEEEEEECTTC-------BCCT--TTCCSSCCCTTCCCCSEEECTTTCCEEEEEEE--TTEEEEEESTTCSEEEEE
T ss_pred CCCCCceeeEEcCCC-------EecC--CcccCCCCCccccCCcEecCCCCCCCcceEEE--cCceeeccccCCEEEEEE
Confidence 753 444443322 1111 0000100 00011 367899964 579999999999999999
Q ss_pred CCCCce-----ee-CCCCCCcceEEEEecCcCeEEEEEccC
Q 011014 216 LHDDDC-----SD-NYDDTFHLGIFVLVAAAFFGYMLALLQ 250 (495)
Q Consensus 216 ~~g~~~-----~~-~~~~g~P~GIAvd~~a~~~~yv~d~~~ 250 (495)
+++... .. ....+.|.+|+++. .+.|||+....
T Consensus 290 ~~~~~~~~~~e~~l~~~~gR~~dv~~~p--DG~lyv~td~~ 328 (347)
T 3das_A 290 LKGTAAAADPQAFLEGEYGRLRTVAPAG--GDKLWLVTSNT 328 (347)
T ss_dssp EETTEESSCCEEESTTTSSCEEEEEEEE--TTEEEEEECTT
T ss_pred ecCCceecceEEeecCCCCCccEEEECC--CCcEEEEEcCC
Confidence 876532 11 23456899999997 67899987643
No 82
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.14 E-value=9.4e-05 Score=73.20 Aligned_cols=145 Identities=8% Similarity=-0.037 Sum_probs=93.5
Q ss_pred CceEEEEcCCCcEEEEEC--CCCeeEEEEc-CCCCccccccCCCcCccccCCcceEEEcCCCCEEEEECCCCEEEEEcCC
Q 011014 84 EPFSVAVSPSGELLVLDS--ENNSRPKLVA-GSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMNMAIRKISDT 160 (495)
Q Consensus 84 ~P~GIAVd~dG~LyVaDs--~n~~ii~iva-Gs~~g~~G~~dG~~~~a~f~~P~GIAVD~dGnIYVAD~~N~rIrk~d~~ 160 (495)
.|.||+++++|.||++.. +.+ .+.++. .+.. ......- ..-..+.||+++ .+.||+++..+++|.++|.+
T Consensus 22 f~~Gl~~~~dg~Lyvstg~~~~s-~v~~iD~~tg~-v~~~i~l----~~~~fgeGi~~~-g~~lyv~t~~~~~v~viD~~ 94 (266)
T 2iwa_A 22 FTQGLVYAENDTLFESTGLYGRS-SVRQVALQTGK-VENIHKM----DDSYFGEGLTLL-NEKLYQVVWLKNIGFIYDRR 94 (266)
T ss_dssp CEEEEEECSTTEEEEEECSTTTC-EEEEEETTTCC-EEEEEEC----CTTCCEEEEEEE-TTEEEEEETTCSEEEEEETT
T ss_pred CcccEEEeCCCeEEEECCCCCCC-EEEEEECCCCC-EEEEEec----CCCcceEEEEEe-CCEEEEEEecCCEEEEEECC
Confidence 589999999899999975 344 444443 2221 1111000 012345688888 45899999999999999965
Q ss_pred C---cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCceee---CCCCC----Cc
Q 011014 161 G---VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCSD---NYDDT----FH 230 (495)
Q Consensus 161 G---V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~gN~rI~~~d~~g~~~~~---~~~~g----~P 230 (495)
. +.++.-+ . ..+.+++ .+.+.|||+| +.++|.+||+.+..... .+..+ .|
T Consensus 95 t~~v~~~i~~g-~----------------~~g~glt--~Dg~~l~vs~-gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~ 154 (266)
T 2iwa_A 95 TLSNIKNFTHQ-M----------------KDGWGLA--TDGKILYGSD-GTSILYEIDPHTFKLIKKHNVKYNGHRVIRL 154 (266)
T ss_dssp TTEEEEEEECC-S----------------SSCCEEE--ECSSSEEEEC-SSSEEEEECTTTCCEEEEEECEETTEECCCE
T ss_pred CCcEEEEEECC-C----------------CCeEEEE--ECCCEEEEEC-CCCeEEEEECCCCcEEEEEEECCCCcccccc
Confidence 4 4555221 0 1235555 3457899999 68899999998855432 11112 46
Q ss_pred ceEEEEecCcCeEEEEEccCCceEEEee
Q 011014 231 LGIFVLVAAAFFGYMLALLQRRVQAMFS 258 (495)
Q Consensus 231 ~GIAvd~~a~~~~yv~d~~~~Rv~~~~~ 258 (495)
.++... .+.+|+.....+.|..+-.
T Consensus 155 nele~~---dg~lyvn~~~~~~V~vID~ 179 (266)
T 2iwa_A 155 NELEYI---NGEVWANIWQTDCIARISA 179 (266)
T ss_dssp EEEEEE---TTEEEEEETTSSEEEEEET
T ss_pred eeEEEE---CCEEEEecCCCCeEEEEEC
Confidence 788777 3479999988888844433
No 83
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.13 E-value=0.00024 Score=69.49 Aligned_cols=152 Identities=13% Similarity=0.028 Sum_probs=99.5
Q ss_pred CceEEEEcCCCcEEEEECCCCeeEEEEcCCCCccccccCCCcCccccCCcceEEEcCCCCEEEEECCCCEEEEEcCCC--
Q 011014 84 EPFSVAVSPSGELLVLDSENNSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMNMAIRKISDTG-- 161 (495)
Q Consensus 84 ~P~GIAVd~dG~LyVaDs~n~~ii~ivaGs~~g~~G~~dG~~~~a~f~~P~GIAVD~dGnIYVAD~~N~rIrk~d~~G-- 161 (495)
...||+++ ++.||+++..++ .+.+++.......+...-. ..+.|++.| .+.||++|. .++|.++|+..
T Consensus 66 fgeGi~~~-~~~ly~ltw~~~-~v~v~D~~tl~~~~ti~~~------~~Gwglt~d-g~~L~vSdg-s~~l~~iDp~t~~ 135 (243)
T 3mbr_X 66 FGAGIVAW-RDRLIQLTWRNH-EGFVYDLATLTPRARFRYP------GEGWALTSD-DSHLYMSDG-TAVIRKLDPDTLQ 135 (243)
T ss_dssp CEEEEEEE-TTEEEEEESSSS-EEEEEETTTTEEEEEEECS------SCCCEEEEC-SSCEEEECS-SSEEEEECTTTCC
T ss_pred ceeEEEEe-CCEEEEEEeeCC-EEEEEECCcCcEEEEEeCC------CCceEEeeC-CCEEEEECC-CCeEEEEeCCCCe
Confidence 34677877 478999998887 4444443211111111100 146788876 468999995 89999999765
Q ss_pred -cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCceee----C-----------C
Q 011014 162 -VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCSD----N-----------Y 225 (495)
Q Consensus 162 -V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~gN~rI~~~d~~g~~~~~----~-----------~ 225 (495)
+.++.-+..+ ..+...+.+.++ +|.||+..+..+.|.+||+....+.. . .
T Consensus 136 ~~~~I~V~~~g------------~~~~~lNeLe~~--~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~ 201 (243)
T 3mbr_X 136 QVGSIKVTAGG------------RPLDNLNELEWV--NGELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDS 201 (243)
T ss_dssp EEEEEECEETT------------EECCCEEEEEEE--TTEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCT
T ss_pred EEEEEEEccCC------------cccccceeeEEe--CCEEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCC
Confidence 4455322111 123445566644 77999999999999999998876532 0 1
Q ss_pred CCCCcceEEEEecCcCeEEEEEccCCceEEEeeCC
Q 011014 226 DDTFHLGIFVLVAAAFFGYMLALLQRRVQAMFSSK 260 (495)
Q Consensus 226 ~~g~P~GIAvd~~a~~~~yv~d~~~~Rv~~~~~s~ 260 (495)
....|.|||.|.. ...+||+..+=.++-.+-+..
T Consensus 202 ~~~vlNGIA~d~~-~~~lfVTGK~wp~~~~v~~~~ 235 (243)
T 3mbr_X 202 TNDVLNGIAFDAE-HDRLFVTGKRWPMLYEIRLTP 235 (243)
T ss_dssp TSSCEEEEEEETT-TTEEEEEETTCSEEEEEEECC
T ss_pred cCCceEEEEEcCC-CCEEEEECCCCCcEEEEEEec
Confidence 1236899999974 468999998877776665544
No 84
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.12 E-value=0.0003 Score=69.16 Aligned_cols=158 Identities=9% Similarity=0.083 Sum_probs=98.1
Q ss_pred CCceEEEEcCCCcEEEEECCCCeeEEEEcCCCCc-c-ccccC-CCcCccccCCcceEEEcCCC-CEEEEECC-CCEEEEE
Q 011014 83 MEPFSVAVSPSGELLVLDSENNSRPKLVAGSPEG-Y-YGHVD-GRPRGARMNHPKGLAVDDRG-NIYIADTM-NMAIRKI 157 (495)
Q Consensus 83 ~~P~GIAVd~dG~LyVaDs~n~~ii~ivaGs~~g-~-~G~~d-G~~~~a~f~~P~GIAVD~dG-nIYVAD~~-N~rIrk~ 157 (495)
..+.||+++++|.++|++-.++++..+-...... . ..... .......=....|||+|+++ .|||+--. ..+|..+
T Consensus 70 ~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~ 149 (255)
T 3qqz_A 70 KDLETIEYIGDNQFVISDERDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKV 149 (255)
T ss_dssp SSEEEEEECSTTEEEEEETTTTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEE
T ss_pred CChHHeEEeCCCEEEEEECCCCcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEE
Confidence 4799999999999999998887444332121100 0 00000 00000001123799999977 58887644 3478888
Q ss_pred c--CCC--cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCceeeC----CCCC-
Q 011014 158 S--DTG--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCSDN----YDDT- 228 (495)
Q Consensus 158 d--~~G--V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~gN~rI~~~d~~g~~~~~~----~~~g- 228 (495)
+ ..+ ++.+.. .. ......+..+.+|++.+..+.|||....+++|..+|++|...... +..|
T Consensus 150 ~g~~~~~~l~i~~~-~~---------~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g~~~~~~~L~~g~~~l 219 (255)
T 3qqz_A 150 NGLLSSNELHISKD-KA---------LQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVGEVIGEMSLTKGSRGL 219 (255)
T ss_dssp ESTTCSSCCEEEEC-HH---------HHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTTCCEEEEEECSTTGGGC
T ss_pred cccccCCceeeecc-hh---------hccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCCCCEEEEEEcCCccCCc
Confidence 7 111 222210 00 000123457899998888999999999999999999999876541 1111
Q ss_pred -----CcceEEEEecCcCeEEEEEccCCce
Q 011014 229 -----FHLGIFVLVAAAFFGYMLALLQRRV 253 (495)
Q Consensus 229 -----~P~GIAvd~~a~~~~yv~d~~~~Rv 253 (495)
-|.|||+|. .+++||++=-| ++
T Consensus 220 ~~~~~qpEGia~d~--~G~lyIvsE~n-~~ 246 (255)
T 3qqz_A 220 SHNIKQAEGVAMDA--SGNIYIVSEPN-RF 246 (255)
T ss_dssp SSCCCSEEEEEECT--TCCEEEEETTT-EE
T ss_pred ccccCCCCeeEECC--CCCEEEEcCCc-eE
Confidence 389999998 56899996553 55
No 85
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.07 E-value=0.00011 Score=72.97 Aligned_cols=148 Identities=13% Similarity=-0.007 Sum_probs=96.6
Q ss_pred ceEEEEcCCCcEEEEECCCCeeEEEEcCCCCccccccCCCcCccccCCcceEEEcCCCCEEEEECCCCEEEEEcCCC---
Q 011014 85 PFSVAVSPSGELLVLDSENNSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMNMAIRKISDTG--- 161 (495)
Q Consensus 85 P~GIAVd~dG~LyVaDs~n~~ii~ivaGs~~g~~G~~dG~~~~a~f~~P~GIAVD~dGnIYVAD~~N~rIrk~d~~G--- 161 (495)
..||+++ .+.||+++..++ .+.+++.......+...-. ..++|++.| .+.||++| +.++|.++|+..
T Consensus 98 geGit~~-g~~Ly~ltw~~~-~v~V~D~~Tl~~~~ti~~~------~eGwGLt~D-g~~L~vSd-Gs~~l~~iDp~T~~v 167 (268)
T 3nok_A 98 AEGLASD-GERLYQLTWTEG-LLFTWSGMPPQRERTTRYS------GEGWGLCYW-NGKLVRSD-GGTMLTFHEPDGFAL 167 (268)
T ss_dssp EEEEEEC-SSCEEEEESSSC-EEEEEETTTTEEEEEEECS------SCCCCEEEE-TTEEEEEC-SSSEEEEECTTTCCE
T ss_pred eeEEEEe-CCEEEEEEccCC-EEEEEECCcCcEEEEEeCC------CceeEEecC-CCEEEEEC-CCCEEEEEcCCCCeE
Confidence 4678887 468999998877 4455443211111111100 135788877 35799999 599999999765
Q ss_pred cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCceee---C------------CC
Q 011014 162 VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCSD---N------------YD 226 (495)
Q Consensus 162 V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~gN~rI~~~d~~g~~~~~---~------------~~ 226 (495)
+.++.-+..+ ..+..++.+.++ +|.||+..+..+.|.+||+....+.. . ..
T Consensus 168 ~~~I~V~~~g------------~~v~~lNeLe~~--dG~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~ 233 (268)
T 3nok_A 168 VGAVQVKLRG------------QPVELINELECA--NGVIYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNP 233 (268)
T ss_dssp EEEEECEETT------------EECCCEEEEEEE--TTEEEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCT
T ss_pred EEEEEeCCCC------------cccccccccEEe--CCEEEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCc
Confidence 4444322111 124456777754 67999999999999999998876531 0 12
Q ss_pred CCCcceEEEEecCcCeEEEEEccCCceEEEe
Q 011014 227 DTFHLGIFVLVAAAFFGYMLALLQRRVQAMF 257 (495)
Q Consensus 227 ~g~P~GIAvd~~a~~~~yv~d~~~~Rv~~~~ 257 (495)
...|.|||.|.. ...+|||..+=.++-.+-
T Consensus 234 ~~vlNGIA~dp~-~~rlfVTGK~Wp~~~ev~ 263 (268)
T 3nok_A 234 EAVLNGIAVEPG-SGRIFMTGKLWPRLFEVR 263 (268)
T ss_dssp TCCEEEEEECTT-TCCEEEEETTCSEEEEEE
T ss_pred CCceEEEEEcCC-CCEEEEeCCCCCceEEEE
Confidence 236899999974 457899987766664443
No 86
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.01 E-value=0.00033 Score=68.82 Aligned_cols=125 Identities=11% Similarity=0.104 Sum_probs=80.0
Q ss_pred ceEEEEcCCC-cEEEEECCCCeeEEEEcCCCCc--cccccCCC-cCccccCCcceEEEcC-CCCEEEEECCCCEEEEEcC
Q 011014 85 PFSVAVSPSG-ELLVLDSENNSRPKLVAGSPEG--YYGHVDGR-PRGARMNHPKGLAVDD-RGNIYIADTMNMAIRKISD 159 (495)
Q Consensus 85 P~GIAVd~dG-~LyVaDs~n~~ii~ivaGs~~g--~~G~~dG~-~~~a~f~~P~GIAVD~-dGnIYVAD~~N~rIrk~d~ 159 (495)
..|||+|+++ .||++.-.....+..+.|-..+ .....+.. .....+..+.+|++|+ .|++||....+++|..+|.
T Consensus 123 ~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~ 202 (255)
T 3qqz_A 123 FEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTL 202 (255)
T ss_dssp CEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECT
T ss_pred cceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcC
Confidence 4999999976 6999875544334444432111 00000000 0112456789999998 7889999999999999999
Q ss_pred CC-cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCC
Q 011014 160 TG-VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHD 218 (495)
Q Consensus 160 ~G-V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~gN~rI~~~d~~g 218 (495)
+| +....--..|. . .....+..|.||+ +|.+|+|||+...| .+++|...+
T Consensus 203 ~g~~~~~~~L~~g~-----~--~l~~~~~qpEGia-~d~~G~lyIvsE~n-~~y~f~~~~ 253 (255)
T 3qqz_A 203 VGEVIGEMSLTKGS-----R--GLSHNIKQAEGVA-MDASGNIYIVSEPN-RFYRFTPQS 253 (255)
T ss_dssp TCCEEEEEECSTTG-----G--GCSSCCCSEEEEE-ECTTCCEEEEETTT-EEEEEEC--
T ss_pred CCCEEEEEEcCCcc-----C--CcccccCCCCeeE-ECCCCCEEEEcCCc-eEEEEEecC
Confidence 99 32222211111 0 1123578999999 79999999998765 999998754
No 87
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=97.85 E-value=0.00037 Score=66.78 Aligned_cols=158 Identities=15% Similarity=0.088 Sum_probs=96.6
Q ss_pred CCceEEEEcCCCc-EEEEECCCCeeEEEEcCCCCccccccC-CCcCccccCCcceEEEcCCCC-EEEEECCCCEEEEEcC
Q 011014 83 MEPFSVAVSPSGE-LLVLDSENNSRPKLVAGSPEGYYGHVD-GRPRGARMNHPKGLAVDDRGN-IYIADTMNMAIRKISD 159 (495)
Q Consensus 83 ~~P~GIAVd~dG~-LyVaDs~n~~ii~ivaGs~~g~~G~~d-G~~~~a~f~~P~GIAVD~dGn-IYVAD~~N~rIrk~d~ 159 (495)
..|.+++++++|+ ||+++..++ .+.++.-...+...... .......-..|.+++++++|+ ||+++..+++|.+++.
T Consensus 129 ~~~~~~~~s~dg~~l~~~~~~~~-~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~ 207 (343)
T 1ri6_A 129 DGCHSANISPDNRTLWVPALKQD-RICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWEL 207 (343)
T ss_dssp TTBCCCEECTTSSEEEEEEGGGT-EEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEES
T ss_pred CCceEEEECCCCCEEEEecCCCC-EEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEe
Confidence 4689999999986 888885555 34443211101100000 000000114688999999998 9999988999999995
Q ss_pred C---C-cE---EEecCcccCCCCCCCCCCcCcccCCCceEEEECCCC-eEEEEECCCCeEEEEECC--CCce---eeCCC
Q 011014 160 T---G-VT---TIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSC-SLLVIDRGNQAIREIQLH--DDDC---SDNYD 226 (495)
Q Consensus 160 ~---G-V~---tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G-~LyVaD~gN~rI~~~d~~--g~~~---~~~~~ 226 (495)
+ | +. .+.....+ ......|.+++ ++++| .||+++..++.|.+++++ +... .....
T Consensus 208 ~~~~g~~~~~~~~~~~~~~-----------~~~~~~~~~i~-~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~ 275 (343)
T 1ri6_A 208 KDPHGNIECVQTLDMMPEN-----------FSDTRWAADIH-ITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPT 275 (343)
T ss_dssp SCTTSCCEEEEEEECSCTT-----------CCSCCCEEEEE-ECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEEC
T ss_pred cCCCCcEEEEeeccccCcc-----------ccccCCccceE-ECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecC
Confidence 3 3 22 22111100 11134567788 46655 789999999999999987 3222 12222
Q ss_pred CCCcceEEEEecCcCeEEEEEccCCceE
Q 011014 227 DTFHLGIFVLVAAAFFGYMLALLQRRVQ 254 (495)
Q Consensus 227 ~g~P~GIAvd~~a~~~~yv~d~~~~Rv~ 254 (495)
.+.|.+++++.. +..+|+++...+.|.
T Consensus 276 ~~~~~~~~~s~d-g~~l~~~~~~~~~v~ 302 (343)
T 1ri6_A 276 ETQPRGFNVDHS-GKYLIAAGQKSHHIS 302 (343)
T ss_dssp SSSCCCEEECTT-SSEEEEECTTTCEEE
T ss_pred CCccceEEECCC-CCEEEEecCCCCeEE
Confidence 334899999862 456888887777884
No 88
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=97.84 E-value=0.00049 Score=68.66 Aligned_cols=166 Identities=16% Similarity=0.044 Sum_probs=96.6
Q ss_pred CCceEEEEcCCCc-EEEEECCCCeeEEEEc-C-CCCcc-ccccCCCcCccccCCcceEEEcCCCC-EEEEECCCCEEEEE
Q 011014 83 MEPFSVAVSPSGE-LLVLDSENNSRPKLVA-G-SPEGY-YGHVDGRPRGARMNHPKGLAVDDRGN-IYIADTMNMAIRKI 157 (495)
Q Consensus 83 ~~P~GIAVd~dG~-LyVaDs~n~~ii~iva-G-s~~g~-~G~~dG~~~~a~f~~P~GIAVD~dGn-IYVAD~~N~rIrk~ 157 (495)
..|.++++++||+ ||++|..++ .+.++. . ++.-. ...... ...-..|.+++++++|+ |||++..++.|.++
T Consensus 145 ~~~~~~~~spdG~~l~~~~~~~~-~v~~~~~~~~g~~~~~~~~~~---~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~ 220 (365)
T 1jof_A 145 TGIHGMVFDPTETYLYSADLTAN-KLWTHRKLASGEVELVGSVDA---PDPGDHPRWVAMHPTGNYLYALMEAGNRICEY 220 (365)
T ss_dssp CCEEEEEECTTSSEEEEEETTTT-EEEEEEECTTSCEEEEEEEEC---SSTTCCEEEEEECTTSSEEEEEETTTTEEEEE
T ss_pred CcceEEEECCCCCEEEEEcCCCC-EEEEEEECCCCCEEEeeeEec---CCCCCCCCEeEECCCCCEEEEEECCCCeEEEE
Confidence 5799999999997 889998766 444432 1 11100 011000 00124699999999996 89999888888887
Q ss_pred c--C-CC-cE----EEecCcccCCCCCCCCCCcCcccCCCceEEEECCCC-eEEEEECCCC-----eEEEEECC-CCcee
Q 011014 158 S--D-TG-VT----TIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSC-SLLVIDRGNQ-----AIREIQLH-DDDCS 222 (495)
Q Consensus 158 d--~-~G-V~----tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G-~LyVaD~gN~-----rI~~~d~~-g~~~~ 222 (495)
+ . +| +. ++.....+. .+. .++ ......|.++++++++| .||+++++.+ +|.+++.+ ...+.
T Consensus 221 ~~~~~~g~~~~~~~~~~~~~~~~-~g~-~~~--~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~ 296 (365)
T 1jof_A 221 VIDPATHMPVYTHHSFPLIPPGI-PDR-DPE--TGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIE 296 (365)
T ss_dssp EECTTTCCEEEEEEEEESSCTTC-CCB-CTT--TSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEE
T ss_pred EEeCCCCcEEEccceEEcCCCCc-CCc-ccc--cccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEE
Confidence 5 2 45 22 121111000 000 000 00112577887235555 6899998766 89998874 22232
Q ss_pred e----C-CCCCCcceEEEEec--CcCeEEEEEccCCceEEE
Q 011014 223 D----N-YDDTFHLGIFVLVA--AAFFGYMLALLQRRVQAM 256 (495)
Q Consensus 223 ~----~-~~~g~P~GIAvd~~--a~~~~yv~d~~~~Rv~~~ 256 (495)
. . .....|.++++... .+..+|+++...++|...
T Consensus 297 ~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~ 337 (365)
T 1jof_A 297 KQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIY 337 (365)
T ss_dssp EEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEE
T ss_pred EeeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEE
Confidence 1 2 22335888888763 356789998877888433
No 89
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=97.84 E-value=0.0023 Score=63.06 Aligned_cols=143 Identities=17% Similarity=0.313 Sum_probs=93.0
Q ss_pred CceEEEEcCCCc-EEEEECCCCeeEEEEcCCCCccccccCCCcCccccCCcceEEEcCCCC-EEEEECCCCEEEEEcCCC
Q 011014 84 EPFSVAVSPSGE-LLVLDSENNSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGN-IYIADTMNMAIRKISDTG 161 (495)
Q Consensus 84 ~P~GIAVd~dG~-LyVaDs~n~~ii~ivaGs~~g~~G~~dG~~~~a~f~~P~GIAVD~dGn-IYVAD~~N~rIrk~d~~G 161 (495)
.+.+++++++|. ||++...++ .++++............. -..+.+++++++|+ ||++....+.|+++|...
T Consensus 33 ~~~~~~~s~dg~~l~~~~~~d~-~i~v~d~~~~~~~~~~~~------~~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~ 105 (391)
T 1l0q_A 33 NPMGAVISPDGTKVYVANAHSN-DVSIIDTATNNVIATVPA------GSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTS 105 (391)
T ss_dssp SEEEEEECTTSSEEEEEEGGGT-EEEEEETTTTEEEEEEEC------SSSEEEEEECTTSSEEEEEETTTTEEEEEETTT
T ss_pred CcceEEECCCCCEEEEECCCCC-eEEEEECCCCeEEEEEEC------CCCccceEECCCCCEEEEEECCCCEEEEEECCC
Confidence 588999999987 678876555 555554321011000010 12678999999988 889998889999999554
Q ss_pred ---cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCC-eEEEEECCCCeEEEEECCCCceee-CCCCCCcceEEEE
Q 011014 162 ---VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSC-SLLVIDRGNQAIREIQLHDDDCSD-NYDDTFHLGIFVL 236 (495)
Q Consensus 162 ---V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G-~LyVaD~gN~rI~~~d~~g~~~~~-~~~~g~P~GIAvd 236 (495)
+.++..+ ..+.+++ ..++| .||++...++.|+.+++....+.. ......|.++++.
T Consensus 106 ~~~~~~~~~~------------------~~~~~~~-~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~ 166 (391)
T 1l0q_A 106 NTVAGTVKTG------------------KSPLGLA-LSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSPKGIAVT 166 (391)
T ss_dssp TEEEEEEECS------------------SSEEEEE-ECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECCSSEEEEEEC
T ss_pred CeEEEEEeCC------------------CCcceEE-ECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecCCCcceEEEC
Confidence 3333211 1456777 45555 577999999999999988766543 2223456777776
Q ss_pred ecCcCeEEEEEccCCce
Q 011014 237 VAAAFFGYMLALLQRRV 253 (495)
Q Consensus 237 ~~a~~~~yv~d~~~~Rv 253 (495)
. .+..+|++....+.|
T Consensus 167 ~-dg~~l~~~~~~~~~v 182 (391)
T 1l0q_A 167 P-DGTKVYVANFDSMSI 182 (391)
T ss_dssp T-TSSEEEEEETTTTEE
T ss_pred C-CCCEEEEEeCCCCEE
Confidence 4 234567777766666
No 90
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=97.83 E-value=0.00076 Score=65.00 Aligned_cols=140 Identities=14% Similarity=0.249 Sum_probs=86.6
Q ss_pred CCCceEEEEcCCCc-EEEEECCCCeeEEEEcCC-CCc--cccccCCCcCccccCCcceEEEcCCCC-EEEEECCCCEEEE
Q 011014 82 GMEPFSVAVSPSGE-LLVLDSENNSRPKLVAGS-PEG--YYGHVDGRPRGARMNHPKGLAVDDRGN-IYIADTMNMAIRK 156 (495)
Q Consensus 82 ~~~P~GIAVd~dG~-LyVaDs~n~~ii~ivaGs-~~g--~~G~~dG~~~~a~f~~P~GIAVD~dGn-IYVAD~~N~rIrk 156 (495)
+..|.+++++++|+ |||++..++ .+.++.-. ..- ...... .-..|.+++++++|+ |||++...+.|.+
T Consensus 175 ~~~~~~~~~spdg~~l~v~~~~~~-~v~v~d~~~~~~~~~~~~~~------~~~~~~~~~~spdg~~l~v~~~~~~~i~~ 247 (331)
T 3u4y_A 175 GTRPFNITFTPDGNFAFVANLIGN-SIGILETQNPENITLLNAVG------TNNLPGTIVVSRDGSTVYVLTESTVDVFN 247 (331)
T ss_dssp SSSEEEEEECTTSSEEEEEETTTT-EEEEEECSSTTSCEEEEEEE------CSSCCCCEEECTTSSEEEEECSSEEEEEE
T ss_pred CCCccceEECCCCCEEEEEeCCCC-eEEEEECCCCcccceeeecc------CCCCCceEEECCCCCEEEEEEcCCCEEEE
Confidence 35799999999997 999998777 44444321 111 011101 125788999999999 9999988889999
Q ss_pred EcCC-C-cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCceeeCCCCCCcceEE
Q 011014 157 ISDT-G-VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCSDNYDDTFHLGIF 234 (495)
Q Consensus 157 ~d~~-G-V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~gN~rI~~~d~~g~~~~~~~~~g~P~GIA 234 (495)
++.. | +..+.....+. ..+ ........++++.++...|||+...++.|.+++..+..+.........-+++
T Consensus 248 ~d~~~~~~~~~~~~~~~~---~~~----~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~g~~~ 320 (331)
T 3u4y_A 248 FNQLSGTLSFVKSFGHGL---LID----PRPLFGANQMALNKTETKLFISANISRELKVFTISGKVVGYVAGIEANGGIA 320 (331)
T ss_dssp EETTTTEEEEEEEEECCC---CCC----CGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSCEEEECTTCCCBSCEE
T ss_pred EECCCCceeeeccccccc---ccC----CCCcccccceEECCCCCEEEEecCCCCcEEEEEecCCcccceecccccCCeE
Confidence 9954 4 32222111000 000 0111222557743344468999999999999999988876644333334444
Q ss_pred E
Q 011014 235 V 235 (495)
Q Consensus 235 v 235 (495)
+
T Consensus 321 ~ 321 (331)
T 3u4y_A 321 I 321 (331)
T ss_dssp E
T ss_pred E
Confidence 3
No 91
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=97.81 E-value=0.00049 Score=65.96 Aligned_cols=148 Identities=11% Similarity=0.074 Sum_probs=95.4
Q ss_pred CCceEEEEcCCCc-EEEEECCCCeeEEEEc-C--CCC-ccccccCCCcCccccCCcceEEEcCCCC-EEEEECCCCEEEE
Q 011014 83 MEPFSVAVSPSGE-LLVLDSENNSRPKLVA-G--SPE-GYYGHVDGRPRGARMNHPKGLAVDDRGN-IYIADTMNMAIRK 156 (495)
Q Consensus 83 ~~P~GIAVd~dG~-LyVaDs~n~~ii~iva-G--s~~-g~~G~~dG~~~~a~f~~P~GIAVD~dGn-IYVAD~~N~rIrk 156 (495)
..|.+|+++++|+ ||+++..+. .+.++. . +.. ........ -..|.+|+++++|+ ||+++..++.|.+
T Consensus 38 ~~~~~~~~spdg~~l~~~~~~~~-~v~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~s~dg~~l~~~~~~~~~i~~ 110 (343)
T 1ri6_A 38 GQVQPMVVSPDKRYLYVGVRPEF-RVLAYRIAPDDGALTFAAESAL------PGSLTHISTDHQGQFVFVGSYNAGNVSV 110 (343)
T ss_dssp SCCCCEEECTTSSEEEEEETTTT-EEEEEEECTTTCCEEEEEEEEC------SSCCSEEEECTTSSEEEEEETTTTEEEE
T ss_pred CCCceEEECCCCCEEEEeecCCC-eEEEEEecCCCCceeecccccc------CCCCcEEEEcCCCCEEEEEecCCCeEEE
Confidence 3689999999998 888887655 444422 1 110 00110000 12789999999998 8899988889999
Q ss_pred EcC-CC--cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCC-eEEEEECCCCeEEEEECCC-Ccee------e-C
Q 011014 157 ISD-TG--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSC-SLLVIDRGNQAIREIQLHD-DDCS------D-N 224 (495)
Q Consensus 157 ~d~-~G--V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G-~LyVaD~gN~rI~~~d~~g-~~~~------~-~ 224 (495)
++. +| ...+.... ....|.+++ ++++| .||+++..++.|+.+++.. ..+. . .
T Consensus 111 ~d~~~~~~~~~~~~~~---------------~~~~~~~~~-~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~ 174 (343)
T 1ri6_A 111 TRLEDGLPVGVVDVVE---------------GLDGCHSAN-ISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTT 174 (343)
T ss_dssp EEEETTEEEEEEEEEC---------------CCTTBCCCE-ECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEEC
T ss_pred EECCCCcccccccccc---------------CCCCceEEE-ECCCCCEEEEecCCCCEEEEEEecCCCceeeeccccccc
Confidence 885 33 11111000 112477788 45555 6999998889999999876 3331 1 2
Q ss_pred CCCCCcceEEEEecCcCeEEEEEccCCceE
Q 011014 225 YDDTFHLGIFVLVAAAFFGYMLALLQRRVQ 254 (495)
Q Consensus 225 ~~~g~P~GIAvd~~a~~~~yv~d~~~~Rv~ 254 (495)
.....|.+++++.. +..+|+++....+|.
T Consensus 175 ~~~~~~~~~~~~pd-g~~l~~~~~~~~~i~ 203 (343)
T 1ri6_A 175 VEGAGPRHMVFHPN-EQYAYCVNELNSSVD 203 (343)
T ss_dssp STTCCEEEEEECTT-SSEEEEEETTTTEEE
T ss_pred CCCCCcceEEECCC-CCEEEEEeCCCCEEE
Confidence 22346888998863 446899988888884
No 92
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=97.81 E-value=0.0027 Score=62.40 Aligned_cols=159 Identities=13% Similarity=0.107 Sum_probs=95.8
Q ss_pred CCCceEEEEcCCCcEEEEECCCCeeEEEEcCCCCccccc------cCC--Cc-CccccCCcceEEEcCCCC-EEEEECCC
Q 011014 82 GMEPFSVAVSPSGELLVLDSENNSRPKLVAGSPEGYYGH------VDG--RP-RGARMNHPKGLAVDDRGN-IYIADTMN 151 (495)
Q Consensus 82 ~~~P~GIAVd~dG~LyVaDs~n~~ii~ivaGs~~g~~G~------~dG--~~-~~a~f~~P~GIAVD~dGn-IYVAD~~N 151 (495)
...|..+++ ....||+++...+ .+.++.-...+.... ..+ .. ......+|.+++++++|+ |||++..+
T Consensus 99 ~~~p~~~~~-dg~~l~~~~~~~~-~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~ 176 (361)
T 3scy_A 99 GADPCYLTT-NGKNIVTANYSGG-SITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGT 176 (361)
T ss_dssp SSCEEEEEE-CSSEEEEEETTTT-EEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTT
T ss_pred CCCcEEEEE-CCCEEEEEECCCC-EEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCC
Confidence 357999999 3345899987766 344432111111100 011 10 112245678999999998 99999999
Q ss_pred CEEEEEc--CCC-------cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCC-eEEEEECCCCeEEEEECCCCce
Q 011014 152 MAIRKIS--DTG-------VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSC-SLLVIDRGNQAIREIQLHDDDC 221 (495)
Q Consensus 152 ~rIrk~d--~~G-------V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G-~LyVaD~gN~rI~~~d~~g~~~ 221 (495)
++|++++ ..+ +... +.... .....-..|.+++ ++++| .|||++..++.|.+++.++..+
T Consensus 177 ~~v~v~~~~~~~~~~~~~~l~~~-~~~~~---------~~~~~~~~~~~~~-~spdg~~l~v~~~~~~~v~v~~~~~g~~ 245 (361)
T 3scy_A 177 DQIHKFNINPNANADNKEKFLTK-GTPEA---------FKVAPGSGPRHLI-FNSDGKFAYLINEIGGTVIAFRYADGML 245 (361)
T ss_dssp TEEEEEEECTTCCTTTCCCCEEE-EEEEE---------EECCTTCCEEEEE-ECTTSSEEEEEETTTCEEEEEEEETTEE
T ss_pred CEEEEEEEcCCCCcccccceeec-ccccc---------eecCCCCCCeEEE-EcCCCCEEEEEcCCCCeEEEEEecCCce
Confidence 9998886 222 2111 00000 0000123577888 56777 5999999899999999876543
Q ss_pred ee-------CCCCCCcceEEEEecCcCeEEEEEcc-CCceE
Q 011014 222 SD-------NYDDTFHLGIFVLVAAAFFGYMLALL-QRRVQ 254 (495)
Q Consensus 222 ~~-------~~~~g~P~GIAvd~~a~~~~yv~d~~-~~Rv~ 254 (495)
.. ......|.+|++... +..+|+++.. .++|.
T Consensus 246 ~~~~~~~~~~~~~~~~~~i~~spd-g~~l~v~~~~~~~~i~ 285 (361)
T 3scy_A 246 DEIQTVAADTVNAQGSGDIHLSPD-GKYLYASNRLKADGVA 285 (361)
T ss_dssp EEEEEEESCSSCCCCEEEEEECTT-SSEEEEEECSSSCEEE
T ss_pred EEeEEEecCCCCCCCcccEEECCC-CCEEEEECCCCCCEEE
Confidence 21 111234778998863 4578999988 77774
No 93
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=97.61 E-value=0.0072 Score=59.51 Aligned_cols=143 Identities=20% Similarity=0.283 Sum_probs=94.4
Q ss_pred CceEEEEcCCCc-EEEEECCCCeeEEEEcCCCCccccccCCCcCccccCCcceEEEcCCCC-EEEEECCCCEEEEEcCC-
Q 011014 84 EPFSVAVSPSGE-LLVLDSENNSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGN-IYIADTMNMAIRKISDT- 160 (495)
Q Consensus 84 ~P~GIAVd~dG~-LyVaDs~n~~ii~ivaGs~~g~~G~~dG~~~~a~f~~P~GIAVD~dGn-IYVAD~~N~rIrk~d~~- 160 (495)
.+.+++++++|+ ||++..... .+.++.-.......... .-..+.+++++++|+ |||+...++.|+++|..
T Consensus 75 ~v~~~~~spdg~~l~~~~~~~~-~v~v~d~~~~~~~~~~~------~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~ 147 (391)
T 1l0q_A 75 SPQGVAVSPDGKQVYVTNMASS-TLSVIDTTSNTVAGTVK------TGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVT 147 (391)
T ss_dssp SEEEEEECTTSSEEEEEETTTT-EEEEEETTTTEEEEEEE------CSSSEEEEEECTTSSEEEEEETTTTEEEEEETTT
T ss_pred CccceEECCCCCEEEEEECCCC-EEEEEECCCCeEEEEEe------CCCCcceEEECCCCCEEEEEeCCCCEEEEEECCC
Confidence 789999999887 778887655 45554322101111000 112578999999998 77999999999999954
Q ss_pred C--cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCC-eEEEEECCCCeEEEEECCCCceee-CCCCCCcceEEEE
Q 011014 161 G--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSC-SLLVIDRGNQAIREIQLHDDDCSD-NYDDTFHLGIFVL 236 (495)
Q Consensus 161 G--V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G-~LyVaD~gN~rI~~~d~~g~~~~~-~~~~g~P~GIAvd 236 (495)
+ +.++..+ ..|.++++ ..++ .||++...++.|+.+++....+.. ......+.++++.
T Consensus 148 ~~~~~~~~~~------------------~~~~~~~~-~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~ 208 (391)
T 1l0q_A 148 KAVINTVSVG------------------RSPKGIAV-TPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVEAAPSGIAVN 208 (391)
T ss_dssp TEEEEEEECC------------------SSEEEEEE-CTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSEEEEEEEC
T ss_pred CcEEEEEecC------------------CCcceEEE-CCCCCEEEEEeCCCCEEEEEECCCCeEEEEEecCCCccceEEC
Confidence 4 3333221 13567774 5555 678999999999999998876543 2334457888887
Q ss_pred ecCcCeEEEEEc--cCCce
Q 011014 237 VAAAFFGYMLAL--LQRRV 253 (495)
Q Consensus 237 ~~a~~~~yv~d~--~~~Rv 253 (495)
. .+..+|++.. .+..|
T Consensus 209 ~-~g~~l~~~~~~~~~~~v 226 (391)
T 1l0q_A 209 P-EGTKAYVTNVDKYFNTV 226 (391)
T ss_dssp T-TSSEEEEEEECSSCCEE
T ss_pred C-CCCEEEEEecCcCCCcE
Confidence 5 2446777775 56666
No 94
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=97.61 E-value=0.0064 Score=65.08 Aligned_cols=160 Identities=11% Similarity=0.032 Sum_probs=101.5
Q ss_pred CceEEEEcCCCc-EEEEECCCCeeEEEEcC---CCCccccccCCCcCccccCCcceEEEcC----CCC-EEEEECCCCEE
Q 011014 84 EPFSVAVSPSGE-LLVLDSENNSRPKLVAG---SPEGYYGHVDGRPRGARMNHPKGLAVDD----RGN-IYIADTMNMAI 154 (495)
Q Consensus 84 ~P~GIAVd~dG~-LyVaDs~n~~ii~ivaG---s~~g~~G~~dG~~~~a~f~~P~GIAVD~----dGn-IYVAD~~N~rI 154 (495)
.|+++++++||. ||+++.+ + .+.++.- +. ....... .-..|.+|++++ +|+ |||+....+.|
T Consensus 180 ~~~~v~~spdg~~l~v~~~d-~-~V~v~D~~~~t~-~~~~~i~------~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v 250 (543)
T 1nir_A 180 AVHISRMSASGRYLLVIGRD-A-RIDMIDLWAKEP-TKVAEIK------IGIEARSVESSKFKGYEDRYTIAGAYWPPQF 250 (543)
T ss_dssp TEEEEEECTTSCEEEEEETT-S-EEEEEETTSSSC-EEEEEEE------CCSEEEEEEECCSTTCTTTEEEEEEEESSEE
T ss_pred ccceEEECCCCCEEEEECCC-C-eEEEEECcCCCC-cEEEEEe------cCCCcceEEeCCCcCCCCCEEEEEEccCCeE
Confidence 489999999986 8888876 4 4555543 21 1111101 113589999999 887 89999888999
Q ss_pred EEEcCCC---cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCce-e--eCCCCC
Q 011014 155 RKISDTG---VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDC-S--DNYDDT 228 (495)
Q Consensus 155 rk~d~~G---V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~gN~rI~~~d~~g~~~-~--~~~~~g 228 (495)
.++|... +.++...... .++. .-..-..+.+|++....+.+||+....+.|..++.....+ . ......
T Consensus 251 ~v~D~~t~~~~~~i~~~g~~-----~~~~-~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~~~ 324 (543)
T 1nir_A 251 AIMDGETLEPKQIVSTRGMT-----VDTQ-TYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAP 324 (543)
T ss_dssp EEEETTTCCEEEEEECCEEC-----SSSC-CEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEECCS
T ss_pred EEEeccccccceeecccCcc-----cCcc-ccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEeccCc
Confidence 9999443 4555331110 0000 0000124567775444678899999999999999876432 1 223345
Q ss_pred CcceEEEEecCcCeEEEEEccCCceEEEeeCC
Q 011014 229 FHLGIFVLVAAAFFGYMLALLQRRVQAMFSSK 260 (495)
Q Consensus 229 ~P~GIAvd~~a~~~~yv~d~~~~Rv~~~~~s~ 260 (495)
+|.+++++. .+..+|+++...+.|. ++...
T Consensus 325 ~~~~~~~sp-dg~~l~va~~~~~~v~-v~D~~ 354 (543)
T 1nir_A 325 FLHDGGWDS-SHRYFMTAANNSNKVA-VIDSK 354 (543)
T ss_dssp SCCCEEECT-TSCEEEEEEGGGTEEE-EEETT
T ss_pred CccCceECC-CCCEEEEEecCCCeEE-EEECC
Confidence 799999986 3456788888888884 34333
No 95
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=97.57 E-value=0.00058 Score=74.34 Aligned_cols=63 Identities=22% Similarity=0.277 Sum_probs=48.6
Q ss_pred cccCCcceEEEcCCCCEEE-EEC-----------CCCEEEEEcC-CC-cEEEecCcccCCCCCCCCCCcCcccCCCceEE
Q 011014 128 ARMNHPKGLAVDDRGNIYI-ADT-----------MNMAIRKISD-TG-VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVV 193 (495)
Q Consensus 128 a~f~~P~GIAVD~dGnIYV-AD~-----------~N~rIrk~d~-~G-V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa 193 (495)
..|+.|.+|++|++|+||| +|. .|+.|.++++ .| +..++.+. .+..|+|++
T Consensus 473 ~~fnsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P---------------~~aEpnGia 537 (592)
T 4a9v_A 473 NMFNSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGP---------------IGCEVTGIS 537 (592)
T ss_dssp TCCCCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECC---------------TTCEEEEEE
T ss_pred CccCCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCC---------------CCccccCCE
Confidence 4799999999999999999 886 3678999997 45 66665322 234789999
Q ss_pred EECCCCeEEEEE
Q 011014 194 YVGSSCSLLVID 205 (495)
Q Consensus 194 ~vd~~G~LyVaD 205 (495)
+.++...|||+-
T Consensus 538 fSPD~ktLfV~v 549 (592)
T 4a9v_A 538 FSPDQKTLFVGI 549 (592)
T ss_dssp ECTTSSEEEEEE
T ss_pred ECCCCCEEEEEE
Confidence 766666788875
No 96
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=97.56 E-value=0.0014 Score=69.52 Aligned_cols=162 Identities=14% Similarity=0.087 Sum_probs=94.0
Q ss_pred CceEEEeecCCCCCCCceEEEEcCCCc--EEEEECCCCeeEEEEcCCCCc---cccccCCCcCc----cccCCcceEEEc
Q 011014 69 GYTVETVFEGSKFGMEPFSVAVSPSGE--LLVLDSENNSRPKLVAGSPEG---YYGHVDGRPRG----ARMNHPKGLAVD 139 (495)
Q Consensus 69 G~~~~~~~~G~~~~~~P~GIAVd~dG~--LyVaDs~n~~ii~ivaGs~~g---~~G~~dG~~~~----a~f~~P~GIAVD 139 (495)
|+.++....+ +..|++|++.+||. |||++... .++++...... ........... .....+.|||++
T Consensus 3 gf~v~~va~g---L~~P~~~a~~pdG~~rl~V~er~G--~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~ 77 (463)
T 2wg3_C 3 CFCIQEVVSG---LRQPVGALHSGDGSQRLFILEKEG--YVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFH 77 (463)
T ss_dssp CEEEEEEEEE---ESSEEEEECCSSSSCCEEEEETTT--EEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEEC
T ss_pred ceEEEEeccC---CCCceEEEECCCCCeEEEEEeCCc--eEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeC
Confidence 4444444433 45899999999985 99999753 56666422111 00000000000 113456799999
Q ss_pred CC----CCEEEEECCC------------CEEEEEcCC-----C-----cEEEecCcccCCCCCCCCCCcCcccCCCceEE
Q 011014 140 DR----GNIYIADTMN------------MAIRKISDT-----G-----VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVV 193 (495)
Q Consensus 140 ~d----GnIYVAD~~N------------~rIrk~d~~-----G-----V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa 193 (495)
++ |.|||+-+.. ++|.++..+ . ..+|...... ..-.....|+
T Consensus 78 P~f~~n~~lYv~yt~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~------------~~~H~g~~l~ 145 (463)
T 2wg3_C 78 PNYKKNGKLYVSYTTNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAEL------------HRKHLGGQLL 145 (463)
T ss_dssp TTHHHHCEEEEEEEECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEES------------SSSSCEEEEE
T ss_pred CCCcCCCEEEEEEeCCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCC------------CCcccCCcEe
Confidence 85 8899986421 478777621 1 1233221100 1123445566
Q ss_pred EECCCCeEEEE--ECC---------------CCeEEEEECCCCc------e---------------eeCCCCCCcceEEE
Q 011014 194 YVGSSCSLLVI--DRG---------------NQAIREIQLHDDD------C---------------SDNYDDTFHLGIFV 235 (495)
Q Consensus 194 ~vd~~G~LyVa--D~g---------------N~rI~~~d~~g~~------~---------------~~~~~~g~P~GIAv 235 (495)
++++|.|||+ |.+ ..+|.+|+++|.. + .+..+.-.|.|+++
T Consensus 146 -fgpDG~LYv~~Gd~~~~~~~~~~~q~~~~~~GkIlRi~~dg~~~~~~y~iP~dNPf~~~~~~~~eI~a~G~RNp~gla~ 224 (463)
T 2wg3_C 146 -FGPDGFLYIILGDGMITLDDMEEMDGLSDFTGSVLRLDVDTDMCNVPYSIPRSNPHFNSTNQPPEVFAHGLHDPGRCAV 224 (463)
T ss_dssp -ECTTSCEEEEECCTTCCHHHHHHCTTCCSCTTEEEEEBCCCCCSSCSCBCCTTSTTTTCSSSCTTEEEECCSSCCBEEE
T ss_pred -ECCCCcEEEEeCCCCCCCCccccccCcCCCCeeEEEEECCCCcccccCcCCCCCCCcCCCCCcccEEEECCCCcceEEE
Confidence 7999999998 433 3579999999941 1 12334445999999
Q ss_pred EecCc---C--eEEEEEc
Q 011014 236 LVAAA---F--FGYMLAL 248 (495)
Q Consensus 236 d~~a~---~--~~yv~d~ 248 (495)
|...+ + .+|++|.
T Consensus 225 dp~tg~~~G~l~~~~~D~ 242 (463)
T 2wg3_C 225 DRHPTDININLTILCSDS 242 (463)
T ss_dssp ESSCSSTTCSEEEEEECC
T ss_pred CCCCCCcccceEEEeccc
Confidence 98533 3 6777775
No 97
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=97.55 E-value=0.00041 Score=73.22 Aligned_cols=111 Identities=12% Similarity=0.057 Sum_probs=74.5
Q ss_pred ccCCcceEEEcCCCCEEEEECCCCEEEEEcC-CC-cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECC----CCeEE
Q 011014 129 RMNHPKGLAVDDRGNIYIADTMNMAIRKISD-TG-VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGS----SCSLL 202 (495)
Q Consensus 129 ~f~~P~GIAVD~dGnIYVAD~~N~rIrk~d~-~G-V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~----~G~Ly 202 (495)
.|..|++|+++++|+|||++....+|++++. +| ..++....... ....-...+.+|+ +++ ++.||
T Consensus 25 ~l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~--------~~~~g~~Gllgia-~~Pdf~~~g~lY 95 (454)
T 1cru_A 25 NLNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIV--------NDADGQNGLLGFA-FHPDFKNNPYIY 95 (454)
T ss_dssp CCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCC--------CCTTSSCSEEEEE-ECTTTTTSCEEE
T ss_pred CCCCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccc--------cccCCCCceeEEE-ECCCcCcCCEEE
Confidence 4789999999999999999998789999985 46 44443321110 0000123567899 455 89999
Q ss_pred EEECC------------CCeEEEEECCCCc--e------ee--C-CCCCCcceEEEEecCcCeEEEEEccC
Q 011014 203 VIDRG------------NQAIREIQLHDDD--C------SD--N-YDDTFHLGIFVLVAAAFFGYMLALLQ 250 (495)
Q Consensus 203 VaD~g------------N~rI~~~d~~g~~--~------~~--~-~~~g~P~GIAvd~~a~~~~yv~d~~~ 250 (495)
|++.. ..+|.+++.+... + .. . .....+.+|+++. .+.|||+....
T Consensus 96 v~~s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~p--DG~Lyv~~Gd~ 164 (454)
T 1cru_A 96 ISGTFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGP--DQKIYYTIGDQ 164 (454)
T ss_dssp EEEEEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECT--TSCEEEEECCT
T ss_pred EEEeccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECC--CCeEEEEECCC
Confidence 99964 4689999875421 1 11 1 1223588899986 66899986554
No 98
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=97.52 E-value=0.01 Score=60.52 Aligned_cols=62 Identities=15% Similarity=0.007 Sum_probs=42.5
Q ss_pred EEEECCCCeEEEEEC---------CCCeEEEEECCCCce-eeCCCCCCcceEEEEecCcCeEEEEEccCCce
Q 011014 192 VVYVGSSCSLLVIDR---------GNQAIREIQLHDDDC-SDNYDDTFHLGIFVLVAAAFFGYMLALLQRRV 253 (495)
Q Consensus 192 Va~vd~~G~LyVaD~---------gN~rI~~~d~~g~~~-~~~~~~g~P~GIAvd~~a~~~~yv~d~~~~Rv 253 (495)
+++..+.+.|||+.. .++.|.+||+.+..+ .+....+.|.+|++...+...+|++....+.|
T Consensus 272 ~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g~~p~~i~~s~Dg~~~l~v~~~~~~~V 343 (373)
T 2mad_H 272 VAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLGHDVDAISVAQDGGPDLYALSAGTEVL 343 (373)
T ss_pred EEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEECCCCcCeEEECCCCCeEEEEEcCCCCeE
Confidence 553334467888754 246899999987665 34444456999999874433688887777788
No 99
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=97.45 E-value=0.0032 Score=62.67 Aligned_cols=107 Identities=10% Similarity=0.089 Sum_probs=70.7
Q ss_pred CCcceEEEcCCCC-EEEEECCCCEEEEEcC--CC-cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCC-eEEEEE
Q 011014 131 NHPKGLAVDDRGN-IYIADTMNMAIRKISD--TG-VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSC-SLLVID 205 (495)
Q Consensus 131 ~~P~GIAVD~dGn-IYVAD~~N~rIrk~d~--~G-V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G-~LyVaD 205 (495)
..|.+++++++|+ |||+|.++++|++++. +| +..+.... . . ..-..|.+++ ++++| .|||++
T Consensus 145 ~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~-~--~---------~~g~~p~~~~-~spdg~~l~v~~ 211 (365)
T 1jof_A 145 TGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVD-A--P---------DPGDHPRWVA-MHPTGNYLYALM 211 (365)
T ss_dssp CCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEE-C--S---------STTCCEEEEE-ECTTSSEEEEEE
T ss_pred CcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEe-c--C---------CCCCCCCEeE-ECCCCCEEEEEE
Confidence 5789999999997 9999998999999984 45 32221100 0 0 0013588888 56666 789999
Q ss_pred CCCCeEEEEECC---CCce------eeCCC--CC---------CcceEE-EEecCcCeEEEEEccCC
Q 011014 206 RGNQAIREIQLH---DDDC------SDNYD--DT---------FHLGIF-VLVAAAFFGYMLALLQR 251 (495)
Q Consensus 206 ~gN~rI~~~d~~---g~~~------~~~~~--~g---------~P~GIA-vd~~a~~~~yv~d~~~~ 251 (495)
..++.|.+++.+ |... ..... .+ .|.+++ +.. .+..+|+++...+
T Consensus 212 ~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~sp-dG~~l~v~~~~~~ 277 (365)
T 1jof_A 212 EAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTF-SGKYMFASSRANK 277 (365)
T ss_dssp TTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECT-TSSEEEEEEEESS
T ss_pred CCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECC-CCCEEEEECCCCC
Confidence 888899888764 3321 11111 11 478888 765 3457899887665
No 100
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.43 E-value=0.0053 Score=60.80 Aligned_cols=137 Identities=12% Similarity=0.033 Sum_probs=89.4
Q ss_pred ceEEEEcCCCcEEEEECCCCeeEEEEc-CC--CCccccccCCCcCccccCCcceEEEcCCCCEEEEECCCCEEEEEcCCC
Q 011014 85 PFSVAVSPSGELLVLDSENNSRPKLVA-GS--PEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMNMAIRKISDTG 161 (495)
Q Consensus 85 P~GIAVd~dG~LyVaDs~n~~ii~iva-Gs--~~g~~G~~dG~~~~a~f~~P~GIAVD~dGnIYVAD~~N~rIrk~d~~G 161 (495)
-.||.++ ++.||++...... ++.++ .+ ..... .+. . ....||+++. +.||+++..+++|.+||.+.
T Consensus 57 tqGL~~~-~~~Ly~stG~~g~-v~~iD~~Tgkv~~~~--l~~-----~-~FgeGit~~g-~~Ly~ltw~~~~v~V~D~~T 125 (268)
T 3nok_A 57 TQGLVFH-QGHFFESTGHQGT-LRQLSLESAQPVWME--RLG-----N-IFAEGLASDG-ERLYQLTWTEGLLFTWSGMP 125 (268)
T ss_dssp EEEEEEE-TTEEEEEETTTTE-EEECCSSCSSCSEEE--ECT-----T-CCEEEEEECS-SCEEEEESSSCEEEEEETTT
T ss_pred cceEEEE-CCEEEEEcCCCCE-EEEEECCCCcEEeEE--CCC-----C-cceeEEEEeC-CEEEEEEccCCEEEEEECCc
Confidence 4799998 5899999988775 44443 12 11111 011 0 1225788874 58999999999999999665
Q ss_pred ---cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCceee---CCCCC----Ccc
Q 011014 162 ---VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCSD---NYDDT----FHL 231 (495)
Q Consensus 162 ---V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~gN~rI~~~d~~g~~~~~---~~~~g----~P~ 231 (495)
+.+|.-. ..+.+++. ..+.||++| +.++|+.||+.+..... ....+ ++.
T Consensus 126 l~~~~ti~~~------------------~eGwGLt~--Dg~~L~vSd-Gs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lN 184 (268)
T 3nok_A 126 PQRERTTRYS------------------GEGWGLCY--WNGKLVRSD-GGTMLTFHEPDGFALVGAVQVKLRGQPVELIN 184 (268)
T ss_dssp TEEEEEEECS------------------SCCCCEEE--ETTEEEEEC-SSSEEEEECTTTCCEEEEEECEETTEECCCEE
T ss_pred CcEEEEEeCC------------------CceeEEec--CCCEEEEEC-CCCEEEEEcCCCCeEEEEEEeCCCCccccccc
Confidence 4555321 13467773 346999999 68999999998855432 12223 345
Q ss_pred eEEEEecCcCeEEEEEccCCceEEE
Q 011014 232 GIFVLVAAAFFGYMLALLQRRVQAM 256 (495)
Q Consensus 232 GIAvd~~a~~~~yv~d~~~~Rv~~~ 256 (495)
.+... .+.+|+..+..+.|..+
T Consensus 185 eLe~~---dG~lyanvw~s~~I~vI 206 (268)
T 3nok_A 185 ELECA---NGVIYANIWHSSDVLEI 206 (268)
T ss_dssp EEEEE---TTEEEEEETTCSEEEEE
T ss_pred ccEEe---CCEEEEEECCCCeEEEE
Confidence 55555 45799999888888433
No 101
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.40 E-value=0.0082 Score=58.59 Aligned_cols=142 Identities=11% Similarity=-0.035 Sum_probs=87.7
Q ss_pred CceEEEEcCCCcEEEEECC--CCeeEEEEcCCCCccccccCCCcCccccCCcceEEEcCCCCEEEEECCCCEEEEEcCCC
Q 011014 84 EPFSVAVSPSGELLVLDSE--NNSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMNMAIRKISDTG 161 (495)
Q Consensus 84 ~P~GIAVd~dG~LyVaDs~--n~~ii~ivaGs~~g~~G~~dG~~~~a~f~~P~GIAVD~dGnIYVAD~~N~rIrk~d~~G 161 (495)
.-.|++++. +.||++... .+.+..+-..++. ......-. .-....||+++ .+.||+++..+++|.++|.+.
T Consensus 22 ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgk-v~~~~~l~----~~~fgeGi~~~-~~~ly~ltw~~~~v~v~D~~t 94 (243)
T 3mbr_X 22 FTEGLFYLR-GHLYESTGETGRSSVRKVDLETGR-ILQRAEVP----PPYFGAGIVAW-RDRLIQLTWRNHEGFVYDLAT 94 (243)
T ss_dssp CEEEEEEET-TEEEEEECCTTSCEEEEEETTTCC-EEEEEECC----TTCCEEEEEEE-TTEEEEEESSSSEEEEEETTT
T ss_pred ccccEEEEC-CEEEEECCCCCCceEEEEECCCCC-EEEEEeCC----CCcceeEEEEe-CCEEEEEEeeCCEEEEEECCc
Confidence 467999985 899999754 3433333222221 01100000 00123577887 468999999999999999765
Q ss_pred ---cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCceee---CCCCCCc----c
Q 011014 162 ---VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCSD---NYDDTFH----L 231 (495)
Q Consensus 162 ---V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~gN~rI~~~d~~g~~~~~---~~~~g~P----~ 231 (495)
+.++.-+ ..+.+++ ...+.||++| +.++|..+|+.+..... ....+.| .
T Consensus 95 l~~~~ti~~~------------------~~Gwglt--~dg~~L~vSd-gs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lN 153 (243)
T 3mbr_X 95 LTPRARFRYP------------------GEGWALT--SDDSHLYMSD-GTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLN 153 (243)
T ss_dssp TEEEEEEECS------------------SCCCEEE--ECSSCEEEEC-SSSEEEEECTTTCCEEEEEECEETTEECCCEE
T ss_pred CcEEEEEeCC------------------CCceEEe--eCCCEEEEEC-CCCeEEEEeCCCCeEEEEEEEccCCcccccce
Confidence 4555321 1356776 3457999999 58999999998855431 2223333 3
Q ss_pred eEEEEecCcCeEEEEEccCCceEEE
Q 011014 232 GIFVLVAAAFFGYMLALLQRRVQAM 256 (495)
Q Consensus 232 GIAvd~~a~~~~yv~d~~~~Rv~~~ 256 (495)
.+... .+.+|+..+..+.|..+
T Consensus 154 eLe~~---~G~lyanvw~s~~I~vI 175 (243)
T 3mbr_X 154 ELEWV---NGELLANVWLTSRIARI 175 (243)
T ss_dssp EEEEE---TTEEEEEETTTTEEEEE
T ss_pred eeEEe---CCEEEEEECCCCeEEEE
Confidence 44444 45799998888888443
No 102
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=97.34 E-value=0.012 Score=61.79 Aligned_cols=78 Identities=9% Similarity=-0.009 Sum_probs=49.8
Q ss_pred CCceEEEEcCCCc-EEEEECC--------CCeeEEEEcCCCCcccccc--CCCcCccccCCcceEEEcCCCC-EEEEECC
Q 011014 83 MEPFSVAVSPSGE-LLVLDSE--------NNSRPKLVAGSPEGYYGHV--DGRPRGARMNHPKGLAVDDRGN-IYIADTM 150 (495)
Q Consensus 83 ~~P~GIAVd~dG~-LyVaDs~--------n~~ii~ivaGs~~g~~G~~--dG~~~~a~f~~P~GIAVD~dGn-IYVAD~~ 150 (495)
..| +|++++||. |||+++. ....+.+++.......+.. .+.........|.++++++||+ |||++..
T Consensus 119 ~~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~ 197 (426)
T 3c75_H 119 FLP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFS 197 (426)
T ss_dssp SSC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECS
T ss_pred CCC-ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecC
Confidence 479 999999987 9999863 1224556543221111111 1100000125799999999996 9999875
Q ss_pred -CCEEEEEcCCC
Q 011014 151 -NMAIRKISDTG 161 (495)
Q Consensus 151 -N~rIrk~d~~G 161 (495)
.+.|.+||...
T Consensus 198 ~~~~VsVID~~t 209 (426)
T 3c75_H 198 PAPAVGVVDLEG 209 (426)
T ss_dssp SSCEEEEEETTT
T ss_pred CCCeEEEEECCC
Confidence 78999999554
No 103
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=97.34 E-value=0.0024 Score=61.37 Aligned_cols=143 Identities=8% Similarity=-0.068 Sum_probs=82.4
Q ss_pred ceEEEEcCCCcEEEEECCCCeeEEEEcCCCCccccccCCCcCccccCCcceEEEcCCCC-EEEEECCCCEEEEEcCC-C-
Q 011014 85 PFSVAVSPSGELLVLDSENNSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGN-IYIADTMNMAIRKISDT-G- 161 (495)
Q Consensus 85 P~GIAVd~dG~LyVaDs~n~~ii~ivaGs~~g~~G~~dG~~~~a~f~~P~GIAVD~dGn-IYVAD~~N~rIrk~d~~-G- 161 (495)
++|+++.+++.+||+...++ .+.++............. .....|.+++++++|+ +||++..++.|.+++.. +
T Consensus 2 ~~g~~~~~~~~~~v~~~~~~-~v~~~d~~~~~~~~~~~~----~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~ 76 (349)
T 1jmx_B 2 DTGPALKAGHEYMIVTNYPN-NLHVVDVASDTVYKSCVM----PDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCK 76 (349)
T ss_dssp --CCCCCTTCEEEEEEETTT-EEEEEETTTTEEEEEEEC----SSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTE
T ss_pred CccccccCCCEEEEEeCCCC-eEEEEECCCCcEEEEEec----CCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCc
Confidence 34667777788888877666 444443221011000000 0112588999999997 89999999999999954 4
Q ss_pred -cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCC-eEEEEECC-----------CCeEEEEECCCCce----eeC
Q 011014 162 -VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSC-SLLVIDRG-----------NQAIREIQLHDDDC----SDN 224 (495)
Q Consensus 162 -V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G-~LyVaD~g-----------N~rI~~~d~~g~~~----~~~ 224 (495)
+.++..... . ...-..|.+++ ++++| .||+++.. ++.|.++++.+... ...
T Consensus 77 ~~~~~~~~~~---~--------~~~~~~~~~~~-~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~ 144 (349)
T 1jmx_B 77 NTFHANLSSV---P--------GEVGRSMYSFA-ISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTF 144 (349)
T ss_dssp EEEEEESCCS---T--------TEEEECSSCEE-ECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEE
T ss_pred EEEEEEcccc---c--------ccccccccceE-ECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeec
Confidence 333321100 0 00123578888 45555 68888854 57999999876322 122
Q ss_pred CCCCCcceEEEEecCcCeEEEE
Q 011014 225 YDDTFHLGIFVLVAAAFFGYML 246 (495)
Q Consensus 225 ~~~g~P~GIAvd~~a~~~~yv~ 246 (495)
.....+.++++... +.+|++
T Consensus 145 ~~~~~~~~~~~s~d--g~l~~~ 164 (349)
T 1jmx_B 145 PMPRQVYLMRAADD--GSLYVA 164 (349)
T ss_dssp ECCSSCCCEEECTT--SCEEEE
T ss_pred cCCCcccceeECCC--CcEEEc
Confidence 22334667777652 236764
No 104
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=97.26 E-value=0.0038 Score=62.49 Aligned_cols=148 Identities=8% Similarity=0.003 Sum_probs=94.2
Q ss_pred CCceEEEEcCCCcEEEEECCCCeeEEEEcCC-CCccccccCCCcCccccCCcceEEEcCCCCEEEEECCCCEEEEEcCCC
Q 011014 83 MEPFSVAVSPSGELLVLDSENNSRPKLVAGS-PEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMNMAIRKISDTG 161 (495)
Q Consensus 83 ~~P~GIAVd~dG~LyVaDs~n~~ii~ivaGs-~~g~~G~~dG~~~~a~f~~P~GIAVD~dGnIYVAD~~N~rIrk~d~~G 161 (495)
..|.++++++++.++++....+ .+.++.-. ..-. ................+++++++|++|++....+.|++++.+.
T Consensus 123 ~~~~~~~~s~~~~~~~~~~~~~-~i~~~d~~~g~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~ 200 (433)
T 3bws_A 123 FQPKSVRFIDNTRLAIPLLEDE-GMDVLDINSGQTV-RLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKT 200 (433)
T ss_dssp SCBCCCEESSSSEEEEEBTTSS-SEEEEETTTCCEE-EECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTT
T ss_pred CCceEEEEeCCCeEEEEeCCCC-eEEEEECCCCeEe-eecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCC
Confidence 4578899999888999887665 34444321 1100 0000000001223456799999999999999999999999543
Q ss_pred ---cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCceee-CCCCCCcceEEEEe
Q 011014 162 ---VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCSD-NYDDTFHLGIFVLV 237 (495)
Q Consensus 162 ---V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~gN~rI~~~d~~g~~~~~-~~~~g~P~GIAvd~ 237 (495)
+.++.+. -..+.++++.+....||+++...+.|+.+++....+.. ....+.+.+++++.
T Consensus 201 ~~~~~~~~~~-----------------~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~ 263 (433)
T 3bws_A 201 LAYKATVDLT-----------------GKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKIGLPRGLLLSK 263 (433)
T ss_dssp CCEEEEEECS-----------------SSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCCSEEEEEEECT
T ss_pred ceEEEEEcCC-----------------CCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCCCCceEEEEcC
Confidence 3444211 12567788655555788999888999999987765543 33444588888875
Q ss_pred cCcCeEEEEEccC
Q 011014 238 AAAFFGYMLALLQ 250 (495)
Q Consensus 238 ~a~~~~yv~d~~~ 250 (495)
. +..++++....
T Consensus 264 ~-g~~l~~~~~~~ 275 (433)
T 3bws_A 264 D-GKELYIAQFSA 275 (433)
T ss_dssp T-SSEEEEEEEES
T ss_pred C-CCEEEEEECCC
Confidence 2 34667776543
No 105
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=97.26 E-value=0.017 Score=62.56 Aligned_cols=156 Identities=8% Similarity=0.004 Sum_probs=92.8
Q ss_pred CCceEEEEcCCCc-EEEEECCCCeeEEEEcC---CCCccccccCCCcCccccCCcceEEEc----CCCC-EEEEECCCCE
Q 011014 83 MEPFSVAVSPSGE-LLVLDSENNSRPKLVAG---SPEGYYGHVDGRPRGARMNHPKGLAVD----DRGN-IYIADTMNMA 153 (495)
Q Consensus 83 ~~P~GIAVd~dG~-LyVaDs~n~~ii~ivaG---s~~g~~G~~dG~~~~a~f~~P~GIAVD----~dGn-IYVAD~~N~r 153 (495)
..|+++++++||. |||++..+ .+.++.- +.. ...... .=..|.+|+++ ++|+ +||++...+.
T Consensus 197 ~~p~~v~~SpDGr~lyv~~~dg--~V~viD~~~~t~~-~v~~i~------~G~~P~~ia~s~~~~pDGk~l~v~n~~~~~ 267 (567)
T 1qks_A 197 YAVHISRLSASGRYLFVIGRDG--KVNMIDLWMKEPT-TVAEIK------IGSEARSIETSKMEGWEDKYAIAGAYWPPQ 267 (567)
T ss_dssp SCEEEEEECTTSCEEEEEETTS--EEEEEETTSSSCC-EEEEEE------CCSEEEEEEECCSTTCTTTEEEEEEEETTE
T ss_pred CCccceEECCCCCEEEEEcCCC--eEEEEECCCCCCc-EeEEEe------cCCCCceeEEccccCCCCCEEEEEEccCCe
Confidence 4799999999987 78887533 3445432 221 111100 01358999999 5885 9999999999
Q ss_pred EEEEcCCC---cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCc---eeeCCCC
Q 011014 154 IRKISDTG---VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDD---CSDNYDD 227 (495)
Q Consensus 154 Irk~d~~G---V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~gN~rI~~~d~~g~~---~~~~~~~ 227 (495)
|.+||... +.++.-+... .++. .-.-.....+|+.......++|+....+.|..++..... +......
T Consensus 268 v~ViD~~t~~~~~~i~~~~~~-----~~~~-~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~ 341 (567)
T 1qks_A 268 YVIMDGETLEPKKIQSTRGMT-----YDEQ-EYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAE 341 (567)
T ss_dssp EEEEETTTCCEEEEEECCEEC-----TTTC-CEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECC
T ss_pred EEEEECCCCcEEEEEeccccc-----cccc-cccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeeecc
Confidence 99999544 4445321110 0000 000001223454333334566666777888888766532 1122233
Q ss_pred CCcceEEEEecCcCeEEEEEccCCceE
Q 011014 228 TFHLGIFVLVAAAFFGYMLALLQRRVQ 254 (495)
Q Consensus 228 g~P~GIAvd~~a~~~~yv~d~~~~Rv~ 254 (495)
.+|.+++++. .+..+|+++...++|.
T Consensus 342 ~~~~d~~~~p-dgr~~~va~~~sn~V~ 367 (567)
T 1qks_A 342 RFLHDGGLDG-SHRYFITAANARNKLV 367 (567)
T ss_dssp SSEEEEEECT-TSCEEEEEEGGGTEEE
T ss_pred ccccCceECC-CCCEEEEEeCCCCeEE
Confidence 4788898886 4567899998888984
No 106
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=97.25 E-value=0.0085 Score=57.00 Aligned_cols=115 Identities=12% Similarity=0.120 Sum_probs=70.4
Q ss_pred CceEEEEcCCC-cEEEEECCCCeeEEEEc-CCCCccccccCCCcCccccCCcceEEEcCCC-CEEEEEC-----------
Q 011014 84 EPFSVAVSPSG-ELLVLDSENNSRPKLVA-GSPEGYYGHVDGRPRGARMNHPKGLAVDDRG-NIYIADT----------- 149 (495)
Q Consensus 84 ~P~GIAVd~dG-~LyVaDs~n~~ii~iva-Gs~~g~~G~~dG~~~~a~f~~P~GIAVD~dG-nIYVAD~----------- 149 (495)
.|.+++++++| .||+++...+ .+.++. .+..- ............-..|.+++++++| .||+++.
T Consensus 35 ~~~~~~~s~dg~~l~v~~~~~~-~v~~~d~~~~~~-~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~ 112 (337)
T 1pby_B 35 TPMVPMVAPGGRIAYATVNKSE-SLVKIDLVTGET-LGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEV 112 (337)
T ss_dssp CCCCEEECTTSSEEEEEETTTT-EEEEEETTTCCE-EEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEE
T ss_pred CccceEEcCCCCEEEEEeCCCC-eEEEEECCCCCe-EeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccc
Confidence 48899999998 4889988766 444443 22110 0000000000011268899999999 4999962
Q ss_pred CCCEEEEEcCCC---cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCe-EEEEECCCCeEEEEECCCCcee
Q 011014 150 MNMAIRKISDTG---VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCS-LLVIDRGNQAIREIQLHDDDCS 222 (495)
Q Consensus 150 ~N~rIrk~d~~G---V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~-LyVaD~gN~rI~~~d~~g~~~~ 222 (495)
.++.|.+++... +..+..+ ..|.+++ ++++|. ||++ ++.|..+++.+..+.
T Consensus 113 ~~~~i~v~d~~~~~~~~~~~~~------------------~~~~~~~-~s~dg~~l~~~---~~~i~~~d~~~~~~~ 167 (337)
T 1pby_B 113 QPTRVALYDAETLSRRKAFEAP------------------RQITMLA-WARDGSKLYGL---GRDLHVMDPEAGTLV 167 (337)
T ss_dssp CCCEEEEEETTTTEEEEEEECC------------------SSCCCEE-ECTTSSCEEEE---SSSEEEEETTTTEEE
T ss_pred cCceEEEEECCCCcEEEEEeCC------------------CCcceeE-ECCCCCEEEEe---CCeEEEEECCCCcEe
Confidence 358999999654 2333211 1367777 455555 8888 467999998876554
No 107
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=97.13 E-value=0.019 Score=62.71 Aligned_cols=196 Identities=9% Similarity=-0.062 Sum_probs=113.4
Q ss_pred eeeeeeeeccceEEEEeCCCCceecCCceeEecCCceEEEeecCCCCCCCceEEEEc--CCC-cEEEEECC---------
Q 011014 35 IVSNVVSALVKWLWSLKDSPKTAVSSSSMIKFEGGYTVETVFEGSKFGMEPFSVAVS--PSG-ELLVLDSE--------- 102 (495)
Q Consensus 35 ~~~~ia~a~~~~I~~~d~~t~~~vaG~~i~~~~~G~~~~~~~~G~~~~~~P~GIAVd--~dG-~LyVaDs~--------- 102 (495)
-..-+....+.+|.++|..+..+. ..+ ....+..|+|+++. |++ .||++...
T Consensus 102 ~~lfVnd~~~~rVavIdl~t~~~~---------------~ii-~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~ 165 (595)
T 1fwx_A 102 RFLFMNDKANTRVARVRCDVMKCD---------------AIL-EIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGT 165 (595)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEE---------------EEE-ECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSS
T ss_pred CEEEEEcCCCCEEEEEECCCceEe---------------eEE-eCCCCCCCcceeeeecCCCcEEEEecccccccCCCCc
Confidence 333445555666777777665433 000 01123469999984 655 48888521
Q ss_pred -------CCeeEEEEcCCCCccccccCCCcCccccCCcceEEEcCCCC-EEEEECCC--------------CEEEEEcC-
Q 011014 103 -------NNSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGN-IYIADTMN--------------MAIRKISD- 159 (495)
Q Consensus 103 -------n~~ii~ivaGs~~g~~G~~dG~~~~a~f~~P~GIAVD~dGn-IYVAD~~N--------------~rIrk~d~- 159 (495)
....+.+++......... ..-. .+|.+++++++|. +||+.... ..|.+++.
T Consensus 166 ~l~~~~~~~~~vtvID~~t~~v~~q----I~Vg--g~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~ 239 (595)
T 1fwx_A 166 NMEDVANYVNVFTAVDADKWEVAWQ----VLVS--GNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIA 239 (595)
T ss_dssp STTCGGGEEEEEEEEETTTTEEEEE----EEES--SCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHH
T ss_pred ccccccccCceEEEEECCCCeEEEE----EEeC--CCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeecc
Confidence 012444444332000000 0000 2699999999887 88888765 34666661
Q ss_pred -------CC-------cEEEecCcc-cCCCCCCCCCCcCcccCCCceEEEECCCC-eEEEEECCCCeEEEEECCCCc---
Q 011014 160 -------TG-------VTTIAGGKW-SRGVGHVDGPSEDAKFSNDFDVVYVGSSC-SLLVIDRGNQAIREIQLHDDD--- 220 (495)
Q Consensus 160 -------~G-------V~tiaGg~~-G~~~g~~dG~~~~a~f~~P~gVa~vd~~G-~LyVaD~gN~rI~~~d~~g~~--- 220 (495)
+| |+.|-+... +. . -......=..|+||.+ .+|| .+||++...++|.+|+.+...
T Consensus 240 ~~~~~v~~Gk~~~i~~V~VID~~~~~~~----~-~~~~Ipvg~~PhGv~~-sPDGk~v~V~~~~s~~VsVid~~~~~~~~ 313 (595)
T 1fwx_A 240 EIEKAIAAGDYQELNGVKVVDGRKEASS----L-FTRYIPIANNPHGCNM-APDKKHLCVAGKLSPTVTVLDVTRFDAVF 313 (595)
T ss_dssp HHHHHHHHTCSEEETTEEEEECSGGGCC----S-SEEEEEEESSCCCEEE-CTTSSEEEEECTTSSBEEEEEGGGHHHHH
T ss_pred ceeEeccCCCeeEECcEEEEeCcccCCc----e-eEEEEecCCCceEEEE-cCCCCEEEEeCCCCCeEEEEECccccccc
Confidence 22 333322110 00 0 0000111158999994 5555 699999999999999998542
Q ss_pred ---------eeeCCCCC-CcceEEEEecCcCeEEEEEccCCceEEEeeCC
Q 011014 221 ---------CSDNYDDT-FHLGIFVLVAAAFFGYMLALLQRRVQAMFSSK 260 (495)
Q Consensus 221 ---------~~~~~~~g-~P~GIAvd~~a~~~~yv~d~~~~Rv~~~~~s~ 260 (495)
+......| .|..++++. .+++|++..+.+-|.++...+
T Consensus 314 ~~~l~~~~~v~~~v~vG~gP~h~aF~~--dG~aY~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 314 YENADPRSAVVAEPELGLGPLHTAFDG--RGNAYTSLFLDSQVVKWNIED 361 (595)
T ss_dssp HSCCCGGGGEEECCBCCSCEEEEEECT--TSEEEEEETTTTEEEEEEHHH
T ss_pred ccccCcccceEEEcCCCCCcceEEECC--CCeEEEEEecCCcEEEEEhhH
Confidence 22333444 499999997 338999999999997765443
No 108
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=97.13 E-value=0.0033 Score=68.52 Aligned_cols=120 Identities=15% Similarity=0.099 Sum_probs=77.9
Q ss_pred ccccCCcceEEEcC-CCCEEEEECCC---------------------CEEEEEcCCC-----------cEEEecCcccCC
Q 011014 127 GARMNHPKGLAVDD-RGNIYIADTMN---------------------MAIRKISDTG-----------VTTIAGGKWSRG 173 (495)
Q Consensus 127 ~a~f~~P~GIAVD~-dGnIYVAD~~N---------------------~rIrk~d~~G-----------V~tiaGg~~G~~ 173 (495)
...|.+|.+|++++ +|.||||=++| ++|.++..++ +..++|......
T Consensus 380 AT~mdRpEdi~v~p~~g~vY~alTnn~~rg~~~~~~~~~Npr~~n~~G~I~r~~e~~~d~~a~~f~W~i~l~~G~p~~~~ 459 (592)
T 4a9v_A 380 ATRMDRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHA 459 (592)
T ss_dssp CCCEECEEEEEECTTTCCEEEEECCBTTTTSTTSCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTST
T ss_pred CccccCccceeEcCCCCEEEEEEeCCCCCCCcCccccCCCCccCCCCCeEEEEeeCCCCcccceeeEEEEEEccCCcccc
Confidence 45788999999998 89999996543 6788887422 222322211100
Q ss_pred CC---CCCCCCcCcccCCCceEEEECCCCeEEE-EEC-----------CCCeEEEEECCCCcee-eCCC--CCCcceEEE
Q 011014 174 VG---HVDGPSEDAKFSNDFDVVYVGSSCSLLV-IDR-----------GNQAIREIQLHDDDCS-DNYD--DTFHLGIFV 235 (495)
Q Consensus 174 ~g---~~dG~~~~a~f~~P~gVa~vd~~G~LyV-aD~-----------gN~rI~~~d~~g~~~~-~~~~--~g~P~GIAv 235 (495)
.+ ...+......|+.|.+|+ ++++|+||| +|. +|+.|.+++++...+. .... ...|.||++
T Consensus 460 ~~~~~g~~~~~~~~~fnsPDnL~-fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiaf 538 (592)
T 4a9v_A 460 GTPKGGSSNITPQNMFNSPDGLG-FDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISF 538 (592)
T ss_dssp TSGGGCCTTCCTTTCCCCEEEEE-ECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEE
T ss_pred cccccCccCccccCccCCCCceE-ECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEE
Confidence 00 001122334799999999 799999999 786 3678999998655443 2222 235899999
Q ss_pred EecCcCeEEEEEc
Q 011014 236 LVAAAFFGYMLAL 248 (495)
Q Consensus 236 d~~a~~~~yv~d~ 248 (495)
.. .+..+||+-.
T Consensus 539 SP-D~ktLfV~vQ 550 (592)
T 4a9v_A 539 SP-DQKTLFVGIQ 550 (592)
T ss_dssp CT-TSSEEEEEEE
T ss_pred CC-CCCEEEEEEe
Confidence 86 3457787754
No 109
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=97.10 E-value=0.043 Score=58.61 Aligned_cols=156 Identities=12% Similarity=0.011 Sum_probs=95.0
Q ss_pred CCCceEEEEcC----CCc-EEEEECCCCeeEEEEcCCCCcccccc--CCC-cCcc---ccCCcceEEEcCCC-CEEEEEC
Q 011014 82 GMEPFSVAVSP----SGE-LLVLDSENNSRPKLVAGSPEGYYGHV--DGR-PRGA---RMNHPKGLAVDDRG-NIYIADT 149 (495)
Q Consensus 82 ~~~P~GIAVd~----dG~-LyVaDs~n~~ii~ivaGs~~g~~G~~--dG~-~~~a---~f~~P~GIAVD~dG-nIYVAD~ 149 (495)
+..|.+|++++ ||. |||++...+ .+.++.+......... .+. .... .-..+.+|++++++ .+||+..
T Consensus 221 g~~p~~va~sp~~~~dg~~l~v~~~~~~-~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~ 299 (543)
T 1nir_A 221 GIEARSVESSKFKGYEDRYTIAGAYWPP-QFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVK 299 (543)
T ss_dssp CSEEEEEEECCSTTCTTTEEEEEEEESS-EEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEET
T ss_pred CCCcceEEeCCCcCCCCCEEEEEEccCC-eEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEEC
Confidence 45799999999 887 788876555 3455543210000000 000 0000 01256789999865 5888998
Q ss_pred CCCEEEEEcCCC---c--EEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCe-EEEEECCCCeEEEEECCCCceee
Q 011014 150 MNMAIRKISDTG---V--TTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCS-LLVIDRGNQAIREIQLHDDDCSD 223 (495)
Q Consensus 150 ~N~rIrk~d~~G---V--~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~-LyVaD~gN~rI~~~d~~g~~~~~ 223 (495)
..++|.+++... + .++.. + ..|.+++ ++++|. ||++....+.|.++|+....+..
T Consensus 300 ~~g~i~vvd~~~~~~l~~~~i~~---~---------------~~~~~~~-~spdg~~l~va~~~~~~v~v~D~~tg~l~~ 360 (543)
T 1nir_A 300 ETGKVLLVNYKDIDNLTVTSIGA---A---------------PFLHDGG-WDSSHRYFMTAANNSNKVAVIDSKDRRLSA 360 (543)
T ss_dssp TTTEEEEEECTTSSSCEEEEEEC---C---------------SSCCCEE-ECTTSCEEEEEEGGGTEEEEEETTTTEEEE
T ss_pred CCCeEEEEEecCCCcceeEEecc---C---------------cCccCce-ECCCCCEEEEEecCCCeEEEEECCCCeEEE
Confidence 999999999432 2 24411 1 2578888 577775 88999888999999998877653
Q ss_pred C-CCCCCc---ceEEEEecCcCeEEEEEcc-CCceEEEee
Q 011014 224 N-YDDTFH---LGIFVLVAAAFFGYMLALL-QRRVQAMFS 258 (495)
Q Consensus 224 ~-~~~g~P---~GIAvd~~a~~~~yv~d~~-~~Rv~~~~~ 258 (495)
. .....| .|+.+.....+.+|++..+ .+.| +++.
T Consensus 361 ~i~~g~~ph~g~g~~~~~p~~g~~~~s~~~~d~~V-~v~d 399 (543)
T 1nir_A 361 LVDVGKTPHPGRGANFVHPKYGPVWSTSHLGDGSI-SLIG 399 (543)
T ss_dssp EEECSSSBCCTTCEEEEETTTEEEEEEEBSSSSEE-EEEE
T ss_pred eeccCCCCCCCCCcccCCCCCccEEEeccCCCceE-EEEE
Confidence 2 211223 4666543334577888764 4666 3443
No 110
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=97.10 E-value=0.049 Score=54.27 Aligned_cols=146 Identities=14% Similarity=0.136 Sum_probs=93.0
Q ss_pred CCceEEEEcCCCc-EEEEECCC------CeeEEEEcCCCCccccccCCCcCccccCCcceEEEcCCCC-EEEEECCCCEE
Q 011014 83 MEPFSVAVSPSGE-LLVLDSEN------NSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGN-IYIADTMNMAI 154 (495)
Q Consensus 83 ~~P~GIAVd~dG~-LyVaDs~n------~~ii~ivaGs~~g~~G~~dG~~~~a~f~~P~GIAVD~dGn-IYVAD~~N~rI 154 (495)
..|.+++++++|+ |+++.... ++.+.++.-.. +..-.. ...-..|.+++++++|+ ||++...+++|
T Consensus 254 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~-~~~~~~-----~~~~~~~~~~~~~~~g~~l~~~~~~~~~v 327 (433)
T 3bws_A 254 GLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDK-EKLIDT-----IGPPGNKRHIVSGNTENKIYVSDMCCSKI 327 (433)
T ss_dssp SEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTT-TEEEEE-----EEEEECEEEEEECSSTTEEEEEETTTTEE
T ss_pred CCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCC-CcEEee-----ccCCCCcceEEECCCCCEEEEEecCCCEE
Confidence 3589999999885 66666422 23455553221 110000 00113678999999995 99999999999
Q ss_pred EEEcCCC---cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCC-eEEEEECCCC--------------eEEEEEC
Q 011014 155 RKISDTG---VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSC-SLLVIDRGNQ--------------AIREIQL 216 (495)
Q Consensus 155 rk~d~~G---V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G-~LyVaD~gN~--------------rI~~~d~ 216 (495)
++++.+. +..+.. ...|.+++ +.++| .||+++..++ .|+.+++
T Consensus 328 ~v~d~~~~~~~~~~~~------------------~~~~~~~~-~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~ 388 (433)
T 3bws_A 328 EVYDLKEKKVQKSIPV------------------FDKPNTIA-LSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDT 388 (433)
T ss_dssp EEEETTTTEEEEEEEC------------------SSSEEEEE-ECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEET
T ss_pred EEEECCCCcEEEEecC------------------CCCCCeEE-EcCCCCEEEEEecCCCccccccccccccceEEEEEEC
Confidence 9999654 333311 12466788 45655 5888887643 8999998
Q ss_pred CCCceee-CCCCCCcceEEEEecCcCeEEEEEccCCceE
Q 011014 217 HDDDCSD-NYDDTFHLGIFVLVAAAFFGYMLALLQRRVQ 254 (495)
Q Consensus 217 ~g~~~~~-~~~~g~P~GIAvd~~a~~~~yv~d~~~~Rv~ 254 (495)
....+.. ......|.++++.. .+..+++++...+.|.
T Consensus 389 ~~~~~~~~~~~~~~~~~~~~s~-dg~~l~~~~~~d~~i~ 426 (433)
T 3bws_A 389 TTDTVKEFWEAGNQPTGLDVSP-DNRYLVISDFLDHQIR 426 (433)
T ss_dssp TTTEEEEEEECSSSEEEEEECT-TSCEEEEEETTTTEEE
T ss_pred CCCcEEEEecCCCCCceEEEcC-CCCEEEEEECCCCeEE
Confidence 7765432 33345688898875 2446777777677773
No 111
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=97.08 E-value=0.015 Score=58.45 Aligned_cols=76 Identities=12% Similarity=0.151 Sum_probs=46.1
Q ss_pred CCceEEEEcCCCc-EEEEECC--------CCeeEEEEc-CCCCccccccC-CCcCccccCCcceEEEcCCCC-EEEEECC
Q 011014 83 MEPFSVAVSPSGE-LLVLDSE--------NNSRPKLVA-GSPEGYYGHVD-GRPRGARMNHPKGLAVDDRGN-IYIADTM 150 (495)
Q Consensus 83 ~~P~GIAVd~dG~-LyVaDs~--------n~~ii~iva-Gs~~g~~G~~d-G~~~~a~f~~P~GIAVD~dGn-IYVAD~~ 150 (495)
..| +|++++||. |||++.. ....+.++. .+.. ..+... +......-..|.+|+++++|+ |||+...
T Consensus 51 ~~p-~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~-~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~ 128 (361)
T 2oiz_A 51 FNG-HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLT-FEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNAS 128 (361)
T ss_dssp EEE-EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCC-EEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEES
T ss_pred CCC-ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCc-EEEEEEcCccccccCCCcceEEECCCCCEEEEECCC
Confidence 368 999999986 8998741 112344443 2211 111100 000000125799999999997 9999875
Q ss_pred -CCEEEEEcCC
Q 011014 151 -NMAIRKISDT 160 (495)
Q Consensus 151 -N~rIrk~d~~ 160 (495)
.+.|.+||.+
T Consensus 129 ~~~~v~v~d~~ 139 (361)
T 2oiz_A 129 PATSIGIVDVA 139 (361)
T ss_dssp SSEEEEEEETT
T ss_pred CCCeEEEEECC
Confidence 6889998843
No 112
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=97.08 E-value=0.026 Score=57.98 Aligned_cols=76 Identities=7% Similarity=-0.084 Sum_probs=46.7
Q ss_pred CCceEEEEcCCCc-EEEEECC--------CCeeEEEEcCCCCcccccc--CCCcCccccCCcceEEEcCCCC-EEEEECC
Q 011014 83 MEPFSVAVSPSGE-LLVLDSE--------NNSRPKLVAGSPEGYYGHV--DGRPRGARMNHPKGLAVDDRGN-IYIADTM 150 (495)
Q Consensus 83 ~~P~GIAVd~dG~-LyVaDs~--------n~~ii~ivaGs~~g~~G~~--dG~~~~a~f~~P~GIAVD~dGn-IYVAD~~ 150 (495)
..| +|++++||. |||+++. ....+.+++-......+.. .+.........|.+|++++||+ |||++..
T Consensus 66 ~~P-~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~ 144 (368)
T 1mda_H 66 FLS-LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFG 144 (368)
T ss_dssp TTC-EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECS
T ss_pred CCC-ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcCCCCEEEEEccC
Confidence 469 999999875 9999842 1224555542211111111 1100001136799999999995 9999875
Q ss_pred -CCEEEE--EcC
Q 011014 151 -NMAIRK--ISD 159 (495)
Q Consensus 151 -N~rIrk--~d~ 159 (495)
++.|.+ +|.
T Consensus 145 ~~~~v~V~~iD~ 156 (368)
T 1mda_H 145 SSAAAGLSVPGA 156 (368)
T ss_dssp SSCEEEEEETTT
T ss_pred CCCeEEEEEEch
Confidence 677888 875
No 113
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.07 E-value=0.021 Score=56.26 Aligned_cols=123 Identities=15% Similarity=0.125 Sum_probs=74.3
Q ss_pred CceEEEEcCCCcEEEEECCCCeeEEEEcCCCCccccccCCCcCccccCCcceEEEcCCCCEEEEECCCCEEEEEcC-CC-
Q 011014 84 EPFSVAVSPSGELLVLDSENNSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMNMAIRKISD-TG- 161 (495)
Q Consensus 84 ~P~GIAVd~dG~LyVaDs~n~~ii~ivaGs~~g~~G~~dG~~~~a~f~~P~GIAVD~dGnIYVAD~~N~rIrk~d~-~G- 161 (495)
.+.|++.| .+.||++|. .+ .+.+++-......+...-......+..++.+... +|.|||+....+.|.+||+ +|
T Consensus 128 eG~glt~d-g~~L~~SdG-s~-~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w~~~~I~vIDp~tG~ 203 (262)
T 3nol_A 128 EGWGLTHN-DQYLIMSDG-TP-VLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIFANVWQTNKIVRIDPETGK 203 (262)
T ss_dssp CCCCEEEC-SSCEEECCS-SS-EEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEECTTTCB
T ss_pred CceEEecC-CCEEEEECC-CC-eEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEEEEEccCCeEEEEECCCCc
Confidence 55677765 357999985 44 4555543211111110000001234556667776 7899999999999999995 55
Q ss_pred -cEEEecC-cccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECCCCeEEEEEC
Q 011014 162 -VTTIAGG-KWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQL 216 (495)
Q Consensus 162 -V~tiaGg-~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~gN~rI~~~d~ 216 (495)
+.++.-. .... .. ........|+|||+.+..+.|||+...=.++.++.+
T Consensus 204 V~~~Id~~~L~~~-~~-----~~~~~~~vlNGIA~dp~~~~lfVTGK~Wp~~~ev~~ 254 (262)
T 3nol_A 204 VTGIIDLNGILAE-AG-----PLPSPIDVLNGIAWDKEHHRLFVTGKLWPKVFEITL 254 (262)
T ss_dssp EEEEEECTTGGGG-SC-----SCCSSCCCEEEEEEETTTTEEEEEETTCSEEEEEEE
T ss_pred EEEEEECCcCccc-cc-----cccCcCCceEEEEEcCCCCEEEEECCCCCceEEEEE
Confidence 3444221 1100 00 011234689999988788999999987788887765
No 114
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=96.95 E-value=0.013 Score=60.75 Aligned_cols=113 Identities=11% Similarity=-0.022 Sum_probs=65.2
Q ss_pred CCceEEEEcCCCc-EEEEECCC--------CeeEEEEcCCCCcccccc---CCCcCccccCCcceEEEcCCCC-EEEEEC
Q 011014 83 MEPFSVAVSPSGE-LLVLDSEN--------NSRPKLVAGSPEGYYGHV---DGRPRGARMNHPKGLAVDDRGN-IYIADT 149 (495)
Q Consensus 83 ~~P~GIAVd~dG~-LyVaDs~n--------~~ii~ivaGs~~g~~G~~---dG~~~~a~f~~P~GIAVD~dGn-IYVAD~ 149 (495)
..|. |++++||. |||++... ...+.+++-......+.. .|. ...--..|.++++++||+ |||+..
T Consensus 79 ~~P~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~-r~~~g~~P~~~a~spDGk~lyVan~ 156 (386)
T 3sjl_D 79 FLPN-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAP-RFLVGTYPWMTSLTPDGKTLLFYQF 156 (386)
T ss_dssp SSCE-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCC-CCCBSCCGGGEEECTTSSEEEEEEC
T ss_pred CCCc-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCcc-ccccCCCCceEEEcCCCCEEEEEEc
Confidence 4685 99999987 99998421 124555543211111110 110 001124899999999997 999987
Q ss_pred C-CCEEEEEcCCC---cEEEecCcccCCCCCCCCCCcCcccCCCce---EEEECCCCeEEEEECCC-CeE
Q 011014 150 M-NMAIRKISDTG---VTTIAGGKWSRGVGHVDGPSEDAKFSNDFD---VVYVGSSCSLLVIDRGN-QAI 211 (495)
Q Consensus 150 ~-N~rIrk~d~~G---V~tiaGg~~G~~~g~~dG~~~~a~f~~P~g---Va~vd~~G~LyVaD~gN-~rI 211 (495)
. .+.|.+||... +.+|.-. ++ ....|.+ ++.+..+|.+++.+... ++|
T Consensus 157 ~~~~~VsVID~~t~~vv~tI~v~------g~--------~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v 212 (386)
T 3sjl_D 157 SPAPAVGVVDLEGKAFKRMLDVP------DC--------YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTP 212 (386)
T ss_dssp SSSCEEEEEETTTTEEEEEEECC------SE--------EEEEEEETTEEEEEETTSCEEEEECCSSSCC
T ss_pred CCCCeEEEEECCCCcEEEEEECC------Cc--------ceeecCCCceeEEECCCCCEEEEECCCCCeE
Confidence 4 78999999544 4555321 10 0112433 12255677777777754 565
No 115
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=96.80 E-value=0.15 Score=52.40 Aligned_cols=112 Identities=12% Similarity=0.091 Sum_probs=73.4
Q ss_pred cccCCcceEEE--cC-CCC--EEEEECCCCEEEEEc----CCC------cEEEecCcccCCCCCCCCCCcCcccCCCceE
Q 011014 128 ARMNHPKGLAV--DD-RGN--IYIADTMNMAIRKIS----DTG------VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDV 192 (495)
Q Consensus 128 a~f~~P~GIAV--D~-dGn--IYVAD~~N~rIrk~d----~~G------V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gV 192 (495)
..+..|.|||+ ++ .|. +||.+.. +++..+. .+| |.++.-+ ..|.++
T Consensus 125 t~~~~pyGlcly~~~~~g~~yafV~~k~-G~~~q~~l~~~~~g~~~~~lVR~f~lg------------------sq~Egc 185 (355)
T 3amr_A 125 TAINEVYGFTLYHSQKTGKYYAMVTGKE-GEFEQYELKADKNGYISGKKVRAFKMN------------------SQTEGM 185 (355)
T ss_dssp CCCSSCCCEEEEECTTTCCEEEEEECSS-SEEEEEEEEECTTSCEEEEEEEEEECS------------------SCEEEE
T ss_pred CCCCCeeEEEEEecCCCCcEEEEEECCC-CeEEEEEEEeCCCCcccceEEEEecCC------------------CCcceE
Confidence 35689999999 77 453 8888875 7777643 234 2333111 257788
Q ss_pred EEECCCCeEEEEECCCCeEEEEECCCC------ceeeCCCCC---CcceEEEEecCc--CeEEEEEccCCceEEEeeCCC
Q 011014 193 VYVGSSCSLLVIDRGNQAIREIQLHDD------DCSDNYDDT---FHLGIFVLVAAA--FFGYMLALLQRRVQAMFSSKD 261 (495)
Q Consensus 193 a~vd~~G~LyVaD~gN~rI~~~d~~g~------~~~~~~~~g---~P~GIAvd~~a~--~~~yv~d~~~~Rv~~~~~s~~ 261 (495)
++.+..|.|||++... .|++|+.+.. .+......+ -+.||++..... +.+++++-.++.+ .++..+
T Consensus 186 vvDd~~g~Lyv~eEd~-GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~--~Vydr~ 262 (355)
T 3amr_A 186 AADDEYGRLYIAEEDE-AIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSY--AIYDRQ 262 (355)
T ss_dssp EEETTTTEEEEEETTT-EEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEE--EEEESS
T ss_pred EEcCCCCeEEEecccc-eEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEE--EEEECC
Confidence 8777899999999984 5999996522 222222332 389999974332 3677888777777 555543
No 116
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=96.74 E-value=0.11 Score=53.73 Aligned_cols=195 Identities=8% Similarity=0.041 Sum_probs=111.6
Q ss_pred eeeeeccceEEEEeCCCCce---------ecCCceeEec--CC--ceEE-EeecCC--CCCCCceEEEEc-C-------C
Q 011014 38 NVVSALVKWLWSLKDSPKTA---------VSSSSMIKFE--GG--YTVE-TVFEGS--KFGMEPFSVAVS-P-------S 93 (495)
Q Consensus 38 ~ia~a~~~~I~~~d~~t~~~---------vaG~~i~~~~--~G--~~~~-~~~~G~--~~~~~P~GIAVd-~-------d 93 (495)
.+....-.++|.+|...... .-+..++.++ .+ ..+. ..+... .....-.+|+|| . +
T Consensus 91 ~v~iD~~~rLWVLDtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~ 170 (381)
T 3q6k_A 91 QPVIDDCRRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSE 170 (381)
T ss_dssp EEEECTTCEEEEEECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCS
T ss_pred EEEEcCCCcEEEEeCCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCc
Confidence 34446679999998664321 1122333332 22 2221 122111 112356789999 2 4
Q ss_pred CcEEEEECCCCeeEEEEcCCCC--c----cccc-------cCCCcCccccCCcceEEEcCC----C-CEEEEECCCCEEE
Q 011014 94 GELLVLDSENNSRPKLVAGSPE--G----YYGH-------VDGRPRGARMNHPKGLAVDDR----G-NIYIADTMNMAIR 155 (495)
Q Consensus 94 G~LyVaDs~n~~ii~ivaGs~~--g----~~G~-------~dG~~~~a~f~~P~GIAVD~d----G-nIYVAD~~N~rIr 155 (495)
+.+||+|....+++.+-..+.. . .+-. .+|..- .....-.|||++++ + .||..-....++.
T Consensus 171 ~~aYItD~~~~gLIVydl~~~~swRv~~~~~~pd~~~~~~i~G~~~-~~~~Gi~gIaLsp~~~~~~~~LYf~plss~~ly 249 (381)
T 3q6k_A 171 TFVYITNFLRGALFIYDHKKQDSWNVTHPTFKAERPTKFDYGGKEY-EFKAGIFGITLGDRDSEGNRPAYYLAGSAIKVY 249 (381)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEECGGGSCCSCEEEEETTEEE-EECCCEEEEEECCCCTTSCCEEEEEESSCSEEE
T ss_pred cEEEEEcCCCCcEEEEECCCCcEEEEccCCCccccCcceEECCEEe-EeccCceEEEecCCcCCCCeEEEEEECCCCcEE
Confidence 6799999987766544322210 0 0000 011100 00135569999986 3 4999999888999
Q ss_pred EEcC----CC-----cEEEecCcccCCCCCCCCCCcCcccCCCceEEEEC-CCCeEEEEECCCCeEEEEECCC-Cc----
Q 011014 156 KISD----TG-----VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVG-SSCSLLVIDRGNQAIREIQLHD-DD---- 220 (495)
Q Consensus 156 k~d~----~G-----V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd-~~G~LyVaD~gN~rI~~~d~~g-~~---- 220 (495)
.+.. +. +..+ |.. | + -....+.+ +| .+|+||+++..++.|.+.++++ ..
T Consensus 250 ~V~T~~L~~~~~~~~v~~~-G~k-g--------~-----~s~~~~~~-~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~n 313 (381)
T 3q6k_A 250 SVNTKELKQKGGKLNPELL-GNR-G--------K-----YNDAIALA-YDPKTKVIFFAEANTKQVSCWNTQKMPLRMKN 313 (381)
T ss_dssp EEEHHHHSSTTCCCCCEEE-EEC-C--------T-----TCCEEEEE-ECTTTCEEEEEESSSSEEEEEETTSCSBCGGG
T ss_pred EEEHHHhhCcchhhceEEe-eec-C--------C-----CCCcceEE-EeCCCCeEEEEeccCCeEEEEeCCCCccccCc
Confidence 8872 22 3332 211 0 0 01222345 55 8999999999999999999998 22
Q ss_pred ---eeeCCCCCCcceEEEEecCcCeEEEEEccCC
Q 011014 221 ---CSDNYDDTFHLGIFVLVAAAFFGYMLALLQR 251 (495)
Q Consensus 221 ---~~~~~~~g~P~GIAvd~~a~~~~yv~d~~~~ 251 (495)
+......-+|.+++++. .+.+|++.-..+
T Consensus 314 ~~~l~~d~~l~~pd~~~i~~--~g~Lwv~sn~l~ 345 (381)
T 3q6k_A 314 TDVVYTSSRFVFGTDISVDS--KGGLWFMSNGFP 345 (381)
T ss_dssp EEEEEECTTCCSEEEEEECT--TSCEEEEECSCC
T ss_pred eEEEEECCCccccCeEEECC--CCeEEEEECcch
Confidence 22234555799999985 668999885433
No 117
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=96.70 E-value=0.073 Score=50.41 Aligned_cols=131 Identities=15% Similarity=0.078 Sum_probs=81.6
Q ss_pred CCCcEEEEECCCCeeEEEEcCCCCccccccCCCcCccccCCcceEEEcCCCC-EEEEECCCCEEEEEcC-CC--cEEEec
Q 011014 92 PSGELLVLDSENNSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGN-IYIADTMNMAIRKISD-TG--VTTIAG 167 (495)
Q Consensus 92 ~dG~LyVaDs~n~~ii~ivaGs~~g~~G~~dG~~~~a~f~~P~GIAVD~dGn-IYVAD~~N~rIrk~d~-~G--V~tiaG 167 (495)
.++.|++-|..+...+..+... + ....|.+++++++|+ |||++...+.|.++|. ++ +.++..
T Consensus 9 ~~~~v~~~d~~~~~~~~~~~~~---------~-----~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~ 74 (337)
T 1pby_B 9 RPDKLVVIDTEKMAVDKVITIA---------D-----AGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDL 74 (337)
T ss_dssp TTTEEEEEETTTTEEEEEEECT---------T-----CTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEEC
T ss_pred CCCeEEEEECCCCcEEEEEEcC---------C-----CCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEc
Confidence 4677888777665444333210 0 001488999999995 8999999999999995 44 333422
Q ss_pred CcccCCCCCCCCCCcCcccCCCceEEEECCCC-eEEEEEC-----------CCCeEEEEECCCCceee-CCCCCCcceEE
Q 011014 168 GKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSC-SLLVIDR-----------GNQAIREIQLHDDDCSD-NYDDTFHLGIF 234 (495)
Q Consensus 168 g~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G-~LyVaD~-----------gN~rI~~~d~~g~~~~~-~~~~g~P~GIA 234 (495)
+..+ ..-..|.+++ ++++| .||+++. .++.|.++++.+..+.. ......|.+++
T Consensus 75 ~~~~------------~~~~~~~~~~-~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~ 141 (337)
T 1pby_B 75 STPE------------ERVKSLFGAA-LSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLA 141 (337)
T ss_dssp CBTT------------EEEECTTCEE-ECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCSSCCCEE
T ss_pred CCcc------------cccccccceE-ECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCCCCcceeE
Confidence 1100 0112577888 56666 7899862 36899999998765532 22334578888
Q ss_pred EEecCcCeEEEEEccCCce
Q 011014 235 VLVAAAFFGYMLALLQRRV 253 (495)
Q Consensus 235 vd~~a~~~~yv~d~~~~Rv 253 (495)
+... +..+|++ +.+|
T Consensus 142 ~s~d-g~~l~~~---~~~i 156 (337)
T 1pby_B 142 WARD-GSKLYGL---GRDL 156 (337)
T ss_dssp ECTT-SSCEEEE---SSSE
T ss_pred ECCC-CCEEEEe---CCeE
Confidence 7752 3456776 3455
No 118
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=96.67 E-value=0.03 Score=58.74 Aligned_cols=79 Identities=11% Similarity=0.048 Sum_probs=55.6
Q ss_pred CcceEEEcCCCC-EEEEEC---------CCCEEEEEcCCC---cEEEe-cCcccCCCCCCCCCCcCcccCCCceEEEECC
Q 011014 132 HPKGLAVDDRGN-IYIADT---------MNMAIRKISDTG---VTTIA-GGKWSRGVGHVDGPSEDAKFSNDFDVVYVGS 197 (495)
Q Consensus 132 ~P~GIAVD~dGn-IYVAD~---------~N~rIrk~d~~G---V~tia-Gg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~ 197 (495)
.| ||++++||+ |||+++ ..+.|.+||... +.+|. ++... ......|.++++.++
T Consensus 120 ~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r-----------~~~g~~P~~~~~spD 187 (426)
T 3c75_H 120 LP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPR-----------FLVGTYQWMNALTPD 187 (426)
T ss_dssp SC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCC-----------CCBSCCGGGSEECTT
T ss_pred CC-ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccc-----------cccCCCcceEEEcCC
Confidence 58 999999997 999986 356799999654 44442 21100 001246899995444
Q ss_pred CCeEEEEECC-CCeEEEEECCCCcee
Q 011014 198 SCSLLVIDRG-NQAIREIQLHDDDCS 222 (495)
Q Consensus 198 ~G~LyVaD~g-N~rI~~~d~~g~~~~ 222 (495)
...|||++.. .+.|.+||+....+.
T Consensus 188 Gk~lyV~n~~~~~~VsVID~~t~kvv 213 (426)
T 3c75_H 188 NKNLLFYQFSPAPAVGVVDLEGKTFD 213 (426)
T ss_dssp SSEEEEEECSSSCEEEEEETTTTEEE
T ss_pred CCEEEEEecCCCCeEEEEECCCCeEE
Confidence 4489999975 789999999987654
No 119
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=96.57 E-value=0.039 Score=57.18 Aligned_cols=80 Identities=15% Similarity=0.081 Sum_probs=54.6
Q ss_pred CcceEEEcCCCC-EEEEECC---------CCEEEEEcCCC---cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCC
Q 011014 132 HPKGLAVDDRGN-IYIADTM---------NMAIRKISDTG---VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSS 198 (495)
Q Consensus 132 ~P~GIAVD~dGn-IYVAD~~---------N~rIrk~d~~G---V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~ 198 (495)
.|. |+++++|+ |||+++. .+.|.+||... +.++.-+... ....-..|.++++..+.
T Consensus 80 ~P~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~----------r~~~g~~P~~~a~spDG 148 (386)
T 3sjl_D 80 LPN-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAP----------RFLVGTYPWMTSLTPDG 148 (386)
T ss_dssp SCE-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCC----------CCCBSCCGGGEEECTTS
T ss_pred CCc-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCcc----------ccccCCCCceEEEcCCC
Confidence 474 99999997 9999852 46799999655 4444211100 00112479999954444
Q ss_pred CeEEEEECC-CCeEEEEECCCCcee
Q 011014 199 CSLLVIDRG-NQAIREIQLHDDDCS 222 (495)
Q Consensus 199 G~LyVaD~g-N~rI~~~d~~g~~~~ 222 (495)
..|||++.. .+.|.+||+....+.
T Consensus 149 k~lyVan~~~~~~VsVID~~t~~vv 173 (386)
T 3sjl_D 149 KTLLFYQFSPAPAVGVVDLEGKAFK 173 (386)
T ss_dssp SEEEEEECSSSCEEEEEETTTTEEE
T ss_pred CEEEEEEcCCCCeEEEEECCCCcEE
Confidence 479999974 789999999987754
No 120
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=96.54 E-value=0.028 Score=59.67 Aligned_cols=66 Identities=9% Similarity=-0.124 Sum_probs=47.4
Q ss_pred CCCceEEEECCCCeEEEEECCCCeEEEEECCCC----ceee--CCC-------------CCCcceEEEEecCcCeEEEEE
Q 011014 187 SNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDD----DCSD--NYD-------------DTFHLGIFVLVAAAFFGYMLA 247 (495)
Q Consensus 187 ~~P~gVa~vd~~G~LyVaD~gN~rI~~~d~~g~----~~~~--~~~-------------~g~P~GIAvd~~a~~~~yv~d 247 (495)
..|.+|.+..++..|||++++.+.|.+|+.... .+.. .++ .|.|.+++++. .+..+||+.
T Consensus 321 ~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSp-DGk~LyVaN 399 (462)
T 2ece_A 321 PLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISR-DGRRVYVTN 399 (462)
T ss_dssp CCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECT-TSSEEEEEC
T ss_pred CceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcC-CCCEEEEEc
Confidence 568999965555679999999999999997522 1111 111 13599999986 356899999
Q ss_pred ccCCce
Q 011014 248 LLQRRV 253 (495)
Q Consensus 248 ~~~~Rv 253 (495)
.+-.++
T Consensus 400 sl~~~w 405 (462)
T 2ece_A 400 SLYSTW 405 (462)
T ss_dssp CCCHHH
T ss_pred CCcccc
Confidence 776666
No 121
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=96.42 E-value=0.024 Score=61.98 Aligned_cols=63 Identities=19% Similarity=0.285 Sum_probs=43.7
Q ss_pred ccccCCcceEEEcCCCCEEEEEC------------CCCEEEEEcCC-C-cEEEecCcccCCCCCCCCCCcCcccCCCceE
Q 011014 127 GARMNHPKGLAVDDRGNIYIADT------------MNMAIRKISDT-G-VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDV 192 (495)
Q Consensus 127 ~a~f~~P~GIAVD~dGnIYVAD~------------~N~rIrk~d~~-G-V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gV 192 (495)
...|+.|-+|+||+.|+|||+.- .|+.+..+++. | ++.|+-+..+ ...+|+
T Consensus 472 ~~~f~~PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~g---------------aE~TG~ 536 (592)
T 3zwu_A 472 QNMFNSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIG---------------CEVTGI 536 (592)
T ss_dssp TTCCCCEEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTT---------------CEEEEE
T ss_pred CCCccCCcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCC---------------ccCcCe
Confidence 34699999999999999999853 36788888854 5 7777654322 134677
Q ss_pred EEECCCCeEEEE
Q 011014 193 VYVGSSCSLLVI 204 (495)
Q Consensus 193 a~vd~~G~LyVa 204 (495)
++.++...|||.
T Consensus 537 ~fspDg~tlfvn 548 (592)
T 3zwu_A 537 SFSPDQKTLFVG 548 (592)
T ss_dssp EECTTSSEEEEE
T ss_pred eECCCCCEEEEE
Confidence 754444567765
No 122
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=96.41 E-value=0.024 Score=54.29 Aligned_cols=99 Identities=8% Similarity=-0.042 Sum_probs=68.4
Q ss_pred cceEEEcCCCCEEEEECCCCEEEEEcCC-C--cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCC-eEEEEECCC
Q 011014 133 PKGLAVDDRGNIYIADTMNMAIRKISDT-G--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSC-SLLVIDRGN 208 (495)
Q Consensus 133 P~GIAVD~dGnIYVAD~~N~rIrk~d~~-G--V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G-~LyVaD~gN 208 (495)
++|+++.+++.+||+...++.|+++|.. + +.++..+. ...|.+++ +.++| .+||++..+
T Consensus 2 ~~g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~----------------~~~~~~~~-~s~dg~~~~v~~~~~ 64 (349)
T 1jmx_B 2 DTGPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPD----------------KFGPGTAM-MAPDNRTAYVLNNHY 64 (349)
T ss_dssp --CCCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSS----------------CCSSCEEE-ECTTSSEEEEEETTT
T ss_pred CccccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCC----------------CCCCceeE-ECCCCCEEEEEeCCC
Confidence 4588888899999999999999999954 4 33442210 11477888 56666 589999999
Q ss_pred CeEEEEECCCCceee-C--CC-----CCCcceEEEEecCcCeEEEEEcc
Q 011014 209 QAIREIQLHDDDCSD-N--YD-----DTFHLGIFVLVAAAFFGYMLALL 249 (495)
Q Consensus 209 ~rI~~~d~~g~~~~~-~--~~-----~g~P~GIAvd~~a~~~~yv~d~~ 249 (495)
+.|.++++.+..+.. . .. ...|.+++++.. +..+|++...
T Consensus 65 ~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spd-g~~l~~~~~~ 112 (349)
T 1jmx_B 65 GDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPD-GKEVYATVNP 112 (349)
T ss_dssp TEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTT-SSEEEEEEEE
T ss_pred CcEEEEeCCCCcEEEEEEcccccccccccccceEECCC-CCEEEEEccc
Confidence 999999998766542 1 11 113788998752 4467877744
No 123
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=96.36 E-value=0.05 Score=52.01 Aligned_cols=132 Identities=10% Similarity=0.055 Sum_probs=75.9
Q ss_pred ceEEEEcCCCcEEEEECCCCeeEEEEcCCCCccccccCCCcCccccCCcceEEEcCCCCEEEEECCCCEEEEEcCCC--c
Q 011014 85 PFSVAVSPSGELLVLDSENNSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMNMAIRKISDTG--V 162 (495)
Q Consensus 85 P~GIAVd~dG~LyVaDs~n~~ii~ivaGs~~g~~G~~dG~~~~a~f~~P~GIAVD~dGnIYVAD~~N~rIrk~d~~G--V 162 (495)
...+++|++|+|||+. .++ ..+..+.....-. . ..-.....+++|++|+|||+.. ++.|.+++.+| +
T Consensus 179 ~~~~~~d~~g~l~v~t---~~l-~~~d~~g~~~~~~-~-----~~~~~~~~~~~~~~g~l~v~t~-~~gl~~~~~~g~~~ 247 (330)
T 3hxj_A 179 TSAASIGKDGTIYFGS---DKV-YAINPDGTEKWNF-Y-----AGYWTVTRPAISEDGTIYVTSL-DGHLYAINPDGTEK 247 (330)
T ss_dssp CSCCEECTTCCEEEES---SSE-EEECTTSCEEEEE-C-----CSSCCCSCCEECTTSCEEEEET-TTEEEEECTTSCEE
T ss_pred eeeeEEcCCCEEEEEe---CEE-EEECCCCcEEEEE-c-----cCCcceeceEECCCCeEEEEcC-CCeEEEECCCCCEe
Confidence 3456777788888877 223 3333221111000 0 0113466889999999999975 57888898877 2
Q ss_pred EEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCceeeC-CCCCCcceEEEEecCcC
Q 011014 163 TTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCSDN-YDDTFHLGIFVLVAAAF 241 (495)
Q Consensus 163 ~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~gN~rI~~~d~~g~~~~~~-~~~g~P~GIAvd~~a~~ 241 (495)
..+... + ..+..++ ++.++.|||+.. ++.|.+++++|...... ........+++|. .+
T Consensus 248 ~~~~~~--~---------------~~~~~~~-~~~~g~l~v~t~-~ggl~~~d~~g~~~~~~~~~~~~~~~~~~d~--~g 306 (330)
T 3hxj_A 248 WRFKTG--K---------------RIESSPV-IGNTDTIYFGSY-DGHLYAINPDGTEKWNFETGSWIIATPVIDE--NG 306 (330)
T ss_dssp EEEECS--S---------------CCCSCCE-ECTTSCEEEECT-TCEEEEECTTSCEEEEEECSSCCCSCCEECT--TC
T ss_pred EEeeCC--C---------------Cccccce-EcCCCeEEEecC-CCCEEEECCCCcEEEEEEcCCccccceEEcC--CC
Confidence 222110 0 0122344 577889999875 45799999877655432 2222345666654 55
Q ss_pred eEEEEEc
Q 011014 242 FGYMLAL 248 (495)
Q Consensus 242 ~~yv~d~ 248 (495)
.+|+...
T Consensus 307 ~l~~gt~ 313 (330)
T 3hxj_A 307 TIYFGTR 313 (330)
T ss_dssp CEEEECT
T ss_pred EEEEEcC
Confidence 6777543
No 124
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=96.33 E-value=0.037 Score=60.52 Aligned_cols=116 Identities=10% Similarity=0.075 Sum_probs=74.8
Q ss_pred CCcceEEEcCCCC-EEEEECCCCEEEEEcCCCcE-EEecCcccCCCCCCCCC-CcCcccCCCceEEEECCCCeEEEEECC
Q 011014 131 NHPKGLAVDDRGN-IYIADTMNMAIRKISDTGVT-TIAGGKWSRGVGHVDGP-SEDAKFSNDFDVVYVGSSCSLLVIDRG 207 (495)
Q Consensus 131 ~~P~GIAVD~dGn-IYVAD~~N~rIrk~d~~GV~-tiaGg~~G~~~g~~dG~-~~~a~f~~P~gVa~vd~~G~LyVaD~g 207 (495)
..|.||++++||. +||++...++|.+||-+... .+.|.-. ..+-. .....=..|..++ ++.+|++|++..-
T Consensus 277 ~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~-----~~~~v~~~v~vG~gP~h~a-F~~dG~aY~t~~l 350 (595)
T 1fwx_A 277 NNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENAD-----PRSAVVAEPELGLGPLHTA-FDGRGNAYTSLFL 350 (595)
T ss_dssp SSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCC-----GGGGEEECCBCCSCEEEEE-ECTTSEEEEEETT
T ss_pred CCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccC-----cccceEEEcCCCCCcceEE-ECCCCeEEEEEec
Confidence 5899999999998 99999999999999965321 0000000 00000 0000013699999 6888899999999
Q ss_pred CCeEEEEECCC----------Ccee-e---CCCCC---CcceEEEEecCcCeEEEEEccC-Cce
Q 011014 208 NQAIREIQLHD----------DDCS-D---NYDDT---FHLGIFVLVAAAFFGYMLALLQ-RRV 253 (495)
Q Consensus 208 N~rI~~~d~~g----------~~~~-~---~~~~g---~P~GIAvd~~a~~~~yv~d~~~-~Rv 253 (495)
.+.|.+++.+. ..+. . ....| ...|+++.. .+.++|+++.+. .|+
T Consensus 351 dsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~-DGk~l~~~Nk~skdr~ 413 (595)
T 1fwx_A 351 DSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDA-TNDWLVCLSKFSKDRF 413 (595)
T ss_dssp TTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTC-CSSEEEEEESCCTTSS
T ss_pred CCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCC-CCCEEEEcCCCCcccc
Confidence 99999999876 2221 1 11111 134555443 356899999887 787
No 125
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=96.32 E-value=0.056 Score=54.17 Aligned_cols=78 Identities=12% Similarity=0.071 Sum_probs=53.8
Q ss_pred CcceEEEcCCCC-EEEEEC---------CCCEEEEEcCCC---cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCC
Q 011014 132 HPKGLAVDDRGN-IYIADT---------MNMAIRKISDTG---VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSS 198 (495)
Q Consensus 132 ~P~GIAVD~dGn-IYVAD~---------~N~rIrk~d~~G---V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~ 198 (495)
.| +|+++++|+ |||++. ..+.|.+||... +.++...... ...-..|.++++ +++
T Consensus 52 ~p-~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~-----------~~~g~~p~~i~~-spd 118 (361)
T 2oiz_A 52 NG-HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKR-----------VQGLNYDGLFRQ-TTD 118 (361)
T ss_dssp EE-EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTB-----------CCBCCCGGGEEE-CTT
T ss_pred CC-ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccc-----------cccCCCcceEEE-CCC
Confidence 57 999999997 999974 245699999554 4444221100 001247899994 555
Q ss_pred C-eEEEEECC-CCeEEEEECCCCcee
Q 011014 199 C-SLLVIDRG-NQAIREIQLHDDDCS 222 (495)
Q Consensus 199 G-~LyVaD~g-N~rI~~~d~~g~~~~ 222 (495)
| .|||++.+ .+.|.+|+++...+.
T Consensus 119 g~~l~v~n~~~~~~v~v~d~~~~~~~ 144 (361)
T 2oiz_A 119 GKFIVLQNASPATSIGIVDVAKGDYV 144 (361)
T ss_dssp SSEEEEEEESSSEEEEEEETTTTEEE
T ss_pred CCEEEEECCCCCCeEEEEECCCCcEE
Confidence 5 79999976 789999999886654
No 126
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=96.30 E-value=0.044 Score=58.00 Aligned_cols=116 Identities=15% Similarity=0.084 Sum_probs=66.3
Q ss_pred CCceEEEEcCC-----C--cEEEEEC-CCC---eeEEEE-cCCCCccccccCCCcCcccc-----CCcceEEEcC-----
Q 011014 83 MEPFSVAVSPS-----G--ELLVLDS-ENN---SRPKLV-AGSPEGYYGHVDGRPRGARM-----NHPKGLAVDD----- 140 (495)
Q Consensus 83 ~~P~GIAVd~d-----G--~LyVaDs-~n~---~ii~iv-aGs~~g~~G~~dG~~~~a~f-----~~P~GIAVD~----- 140 (495)
.+|.|+++|+. | .+|++|. +.+ ..+..+ .|.. .|.. .+ ...+ ..|.|+++-.
T Consensus 217 RNp~gla~dp~tg~~~G~l~~~~~D~~G~~~~~~ei~~i~~G~~---yG~~-~P--~~~~~~~~g~Ap~G~~~Y~G~~fP 290 (463)
T 2wg3_C 217 HDPGRCAVDRHPTDININLTILCSDSNGKNRSSARILQIIKGKD---YESE-PS--LLEFKPFSNGPLVGGFVYRGCQSE 290 (463)
T ss_dssp SSCCBEEEESSCSSTTCSEEEEEECC------CEEEEEEC-------CCSC-CC--CEECCC----CEEEEEECCCSSCT
T ss_pred CCcceEEECCCCCCcccceEEEecccCCCCCCCCeEeeeccCCC---CCCC-CC--eEEeeCCCCccccceEEEeCCCCh
Confidence 48999999986 5 5677886 222 223222 3332 2221 11 1111 3678999852
Q ss_pred --CCCEEEEECCCCEEEEEcC--CC-c---EEE-ecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEEC-----
Q 011014 141 --RGNIYIADTMNMAIRKISD--TG-V---TTI-AGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDR----- 206 (495)
Q Consensus 141 --dGnIYVAD~~N~rIrk~d~--~G-V---~ti-aGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~----- 206 (495)
.|.++|+|.. .+|.++.. ++ + ..+ .+. ... ........|.+|+ ++.+|.|||+|.
T Consensus 291 ~~~g~~f~~~~~-g~i~~~~~~~~~~~~~~~~~~~g~-~~~--------~~~~~~~r~~~v~-~~pdG~Lyv~~~~~~~~ 359 (463)
T 2wg3_C 291 RLYGSYVFGDRN-GNFLTLQQSPVTKQWQEKPLCLGT-SGS--------CRGYFSGHILGFG-EDELGEVYILSSSKSMT 359 (463)
T ss_dssp TTTTCEEEEETT-SCEEEEEC-----CCEEEEECEEE-TTS--------SCSCCCSEEEEEE-ECTTCCEEEEEESSCGG
T ss_pred hhcceEEEecCC-CcEEEEEeCCCCceeeEEEeecCC-ccc--------ccccccCcceEEE-ECCCCCEEEEeccCCcc
Confidence 4669999996 77888763 22 1 112 111 000 0011235789998 799999999996
Q ss_pred --CCCeEEEEE
Q 011014 207 --GNQAIREIQ 215 (495)
Q Consensus 207 --gN~rI~~~d 215 (495)
.+++|++|.
T Consensus 360 ~~~~G~I~Ri~ 370 (463)
T 2wg3_C 360 QTHNGKLYKIV 370 (463)
T ss_dssp GCSSEEEEEEE
T ss_pred cCCCCcEEEec
Confidence 578999998
No 127
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=96.20 E-value=0.11 Score=52.70 Aligned_cols=86 Identities=14% Similarity=0.215 Sum_probs=60.7
Q ss_pred Ccce---EEEcCCCC-EEEEEC---------CCCEEEEEcCCC---cEEEecCcccCCCCCCCCCCcCcccCCCceEEEE
Q 011014 132 HPKG---LAVDDRGN-IYIADT---------MNMAIRKISDTG---VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYV 195 (495)
Q Consensus 132 ~P~G---IAVD~dGn-IYVAD~---------~N~rIrk~d~~G---V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~v 195 (495)
.|.| ++++++|+ |||+.. .++.|.+||... +.++..+ ..|.+|+ +
T Consensus 265 ~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g------------------~~p~~i~-~ 325 (373)
T 2mad_H 265 RPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLG------------------HDVDAIS-V 325 (373)
T ss_pred ecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEECC------------------CCcCeEE-E
Confidence 4666 89998765 999854 246899999654 4555321 1588998 5
Q ss_pred CCCCe--EEEEECCCCeEEEEECCCCceeeC-CC-CCCcceEEEE
Q 011014 196 GSSCS--LLVIDRGNQAIREIQLHDDDCSDN-YD-DTFHLGIFVL 236 (495)
Q Consensus 196 d~~G~--LyVaD~gN~rI~~~d~~g~~~~~~-~~-~g~P~GIAvd 236 (495)
+.+|. +|++..+++.|.+||..+..+... .. ...|.+|.+.
T Consensus 326 s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~i~~vG~~P~~~~~~ 370 (373)
T 2mad_H 326 AQDGGPDLYALSAGTEVLHIYDAGAGDQDQSTVELGSGPQVLSVM 370 (373)
T ss_pred CCCCCeEEEEEcCCCCeEEEEECCCCCEEeeecCCCCCCcEEEEc
Confidence 66665 788887899999999988665533 33 3368888764
No 128
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=95.98 E-value=0.077 Score=50.71 Aligned_cols=137 Identities=9% Similarity=0.044 Sum_probs=79.9
Q ss_pred eEEEEcCCCcEEEEECCCCeeEEEEcCCCCccccccCCCcCccccCCcceEEEcCCCCEEEEECCCCEEEEEcCCCcEEE
Q 011014 86 FSVAVSPSGELLVLDSENNSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMNMAIRKISDTGVTTI 165 (495)
Q Consensus 86 ~GIAVd~dG~LyVaDs~n~~ii~ivaGs~~g~~G~~dG~~~~a~f~~P~GIAVD~dGnIYVAD~~N~rIrk~d~~GV~ti 165 (495)
..++++++|+|||+...+ .+..+...+.-..-. .. .-.....+++|.+|+|||+. +.|.+++.+|....
T Consensus 140 ~~~~~~~~g~l~vgt~~~--~l~~~d~~g~~~~~~-~~-----~~~~~~~~~~d~~g~l~v~t---~~l~~~d~~g~~~~ 208 (330)
T 3hxj_A 140 ATPIVSEDGTIYVGSNDN--YLYAINPDGTEKWRF-KT-----NDAITSAASIGKDGTIYFGS---DKVYAINPDGTEKW 208 (330)
T ss_dssp SCCEECTTSCEEEECTTS--EEEEECTTSCEEEEE-EC-----SSCCCSCCEECTTCCEEEES---SSEEEECTTSCEEE
T ss_pred eeeEEcCCCEEEEEcCCC--EEEEECCCCCEeEEE-ec-----CCCceeeeEEcCCCEEEEEe---CEEEEECCCCcEEE
Confidence 445778788888876433 233333221100000 00 01234567899999999997 78999997773222
Q ss_pred ecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCceee-CCCCCCcceEEEEecCcCeEE
Q 011014 166 AGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCSD-NYDDTFHLGIFVLVAAAFFGY 244 (495)
Q Consensus 166 aGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~gN~rI~~~d~~g~~~~~-~~~~g~P~GIAvd~~a~~~~y 244 (495)
.-... -.....++ .+.+|.|||+.. ++.|.+++.++..... ......+..++++. .+.+|
T Consensus 209 ~~~~~---------------~~~~~~~~-~~~~g~l~v~t~-~~gl~~~~~~g~~~~~~~~~~~~~~~~~~~~--~g~l~ 269 (330)
T 3hxj_A 209 NFYAG---------------YWTVTRPA-ISEDGTIYVTSL-DGHLYAINPDGTEKWRFKTGKRIESSPVIGN--TDTIY 269 (330)
T ss_dssp EECCS---------------SCCCSCCE-ECTTSCEEEEET-TTEEEEECTTSCEEEEEECSSCCCSCCEECT--TSCEE
T ss_pred EEccC---------------CcceeceE-ECCCCeEEEEcC-CCeEEEECCCCCEeEEeeCCCCccccceEcC--CCeEE
Confidence 11000 02244556 688899999986 5678888887766543 22333455666664 56778
Q ss_pred EEEccCCce
Q 011014 245 MLALLQRRV 253 (495)
Q Consensus 245 v~d~~~~Rv 253 (495)
+... +..|
T Consensus 270 v~t~-~ggl 277 (330)
T 3hxj_A 270 FGSY-DGHL 277 (330)
T ss_dssp EECT-TCEE
T ss_pred EecC-CCCE
Confidence 7654 3456
No 129
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=95.92 E-value=0.075 Score=52.87 Aligned_cols=100 Identities=7% Similarity=0.013 Sum_probs=62.7
Q ss_pred EcCC-CCEEEEECCCCEEEEEcCCC--cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECCC-CeEEE
Q 011014 138 VDDR-GNIYIADTMNMAIRKISDTG--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGN-QAIRE 213 (495)
Q Consensus 138 VD~d-GnIYVAD~~N~rIrk~d~~G--V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~gN-~rI~~ 213 (495)
++.+ +.||.+|.+...|.+++.+| ..++..+ +..+++.+..+.||.+|..+ .+|.+
T Consensus 152 ~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~~--------------------~~~~~~~P~g~~iy~t~~~~~~~I~~ 211 (302)
T 3s25_A 152 CNTSDRYFYYNNPKNGQLYRYDTASQSEALFYDC--------------------NCYKPVVLDDTNVYYMDVNRDNAIVH 211 (302)
T ss_dssp SEEETTEEEEECTTTCCEEEEETTTTEEEEEECS--------------------CEEEEEEEETTEEEEEEGGGTTEEEE
T ss_pred eeEECCEEEEEeCCCceEEEEECCCCCEEEEeCC--------------------CccceeeecCCEEEEEEcCCCcEEEE
Confidence 3443 46999999889999999777 3444211 11122245678999999754 68999
Q ss_pred EECCCCceeeCCCCCCcceEEEEecCcCeEEEE-EccCCceEEEeeCCC
Q 011014 214 IQLHDDDCSDNYDDTFHLGIFVLVAAAFFGYML-ALLQRRVQAMFSSKD 261 (495)
Q Consensus 214 ~d~~g~~~~~~~~~g~P~GIAvd~~a~~~~yv~-d~~~~Rv~~~~~s~~ 261 (495)
++++|...........|. ++.+ +..||.+ +.....+..+-.+..
T Consensus 212 ~~ldG~~~~~Lt~~~~~~-~~~~---g~~Iy~~~~~~~~~i~~~~~DG~ 256 (302)
T 3s25_A 212 VNINNPNPVVLTEANIEH-YNVY---GSLIFYQRGGDNPALCVVKNDGT 256 (302)
T ss_dssp ECSSSCCCEECSCSCEEE-EEEE---TTEEEEEECSSSCEEEEEETTSC
T ss_pred EECCCCCeEEEeCCCcce-EEEC---CCEEEEEECCCCcEEEEEECCCC
Confidence 999998766544444444 5554 4566765 444455554444443
No 130
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=95.37 E-value=0.06 Score=55.32 Aligned_cols=118 Identities=22% Similarity=0.247 Sum_probs=70.4
Q ss_pred CCceEEEE--cC-CCc--EEEEECCCCeeEE--EEc-CCCCccccccCCCcCccccCCcceEEEcC-CCCEEEEECCCCE
Q 011014 83 MEPFSVAV--SP-SGE--LLVLDSENNSRPK--LVA-GSPEGYYGHVDGRPRGARMNHPKGLAVDD-RGNIYIADTMNMA 153 (495)
Q Consensus 83 ~~P~GIAV--d~-dG~--LyVaDs~n~~ii~--iva-Gs~~g~~G~~dG~~~~a~f~~P~GIAVD~-dGnIYVAD~~N~r 153 (495)
..|.|||+ ++ .|. +||++.... +.+ +.. +.+. ..+..-... ..-..|.|+++|+ .|.|||++-. ..
T Consensus 128 ~~pyGlcly~~~~~g~~yafV~~k~G~-~~q~~l~~~~~g~-~~~~lVR~f--~lgsq~EgcvvDd~~g~Lyv~eEd-~G 202 (355)
T 3amr_A 128 NEVYGFTLYHSQKTGKYYAMVTGKEGE-FEQYELKADKNGY-ISGKKVRAF--KMNSQTEGMAADDEYGRLYIAEED-EA 202 (355)
T ss_dssp SSCCCEEEEECTTTCCEEEEEECSSSE-EEEEEEEECTTSC-EEEEEEEEE--ECSSCEEEEEEETTTTEEEEEETT-TE
T ss_pred CCeeEEEEEecCCCCcEEEEEECCCCe-EEEEEEEeCCCCc-ccceEEEEe--cCCCCcceEEEcCCCCeEEEeccc-ce
Confidence 68999999 77 454 777776532 323 322 2210 000000000 0013688999996 7889999986 55
Q ss_pred EEEEcCC--C---cEEEecCcccCCCCCCCCCCcCcccC-CCceEEEE-CC--CCeEEEEECCCCeEEEEECCC
Q 011014 154 IRKISDT--G---VTTIAGGKWSRGVGHVDGPSEDAKFS-NDFDVVYV-GS--SCSLLVIDRGNQAIREIQLHD 218 (495)
Q Consensus 154 Irk~d~~--G---V~tiaGg~~G~~~g~~dG~~~~a~f~-~P~gVa~v-d~--~G~LyVaD~gN~rI~~~d~~g 218 (495)
|++|+.+ + -..++--.. ..|. .+.||++. .. .|.|+|++.+++...+|+..+
T Consensus 203 Iw~~da~p~~~~~~~~v~~~~~-------------g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~ 263 (355)
T 3amr_A 203 IWKFSAEPDGGSNGTVIDRADG-------------RHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQG 263 (355)
T ss_dssp EEEEECSTTSCSCCEEEEEBSS-------------SSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESST
T ss_pred EEEEeCCcCCCCCceEEEEecC-------------CccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCC
Confidence 9999933 3 122211000 1122 68889864 22 257999999999999999874
No 131
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=95.29 E-value=0.18 Score=51.56 Aligned_cols=107 Identities=14% Similarity=-0.043 Sum_probs=65.8
Q ss_pred CcceEEEcCCCC-EEEEEC---------CCCEEEEEcCCC---cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCC
Q 011014 132 HPKGLAVDDRGN-IYIADT---------MNMAIRKISDTG---VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSS 198 (495)
Q Consensus 132 ~P~GIAVD~dGn-IYVAD~---------~N~rIrk~d~~G---V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~ 198 (495)
.| ||+++++|. |||+++ ..+.|.+||... +.++.-+..+ .......|.++++.++.
T Consensus 67 ~P-~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~----------~~~~g~~P~~ia~SpDG 135 (368)
T 1mda_H 67 LS-LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAP----------RFSVGPRVHIIGNCASS 135 (368)
T ss_dssp TC-EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSC----------SCCBSCCTTSEEECTTS
T ss_pred CC-ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCcc----------ccccCCCcceEEEcCCC
Confidence 48 999999886 999984 368899999544 5555321000 00112579999954444
Q ss_pred CeEEEEECC-CCeEEE--EECCCCceeeCCCCCCcceEEEEecCcCeEEEEEccCCceEE
Q 011014 199 CSLLVIDRG-NQAIRE--IQLHDDDCSDNYDDTFHLGIFVLVAAAFFGYMLALLQRRVQA 255 (495)
Q Consensus 199 G~LyVaD~g-N~rI~~--~d~~g~~~~~~~~~g~P~GIAvd~~a~~~~yv~d~~~~Rv~~ 255 (495)
..|||++.. ++.|.+ ||+.. .....-.+. ..+.-+ +...|++.+..+++..
T Consensus 136 k~lyVan~~~~~~v~V~~iD~~t--v~~i~v~~~-~~~~p~---g~~~~~~~~~dg~~~~ 189 (368)
T 1mda_H 136 ACLLFFLFGSSAAAGLSVPGASD--DQLTKSASC-FHIHPG---AAATHYLGSCPASLAA 189 (368)
T ss_dssp SCEEEEECSSSCEEEEEETTTEE--EEEEECSSC-CCCEEE---ETTEEECCCCTTSCEE
T ss_pred CEEEEEccCCCCeEEEEEEchhh--ceEEECCCc-eEEccC---CCeEEEEEcCCCCEEE
Confidence 489999976 678888 88766 222211111 112222 3456777777777733
No 132
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=95.25 E-value=0.98 Score=49.81 Aligned_cols=140 Identities=4% Similarity=-0.062 Sum_probs=75.9
Q ss_pred CCceEEEEcCCCcEEEEECCCCeeEEEEcCCCCccccccCCCcCccccCCcceEEEcCCCCEEEEECCCCEEEEEcCCC-
Q 011014 83 MEPFSVAVSPSGELLVLDSENNSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMNMAIRKISDTG- 161 (495)
Q Consensus 83 ~~P~GIAVd~dG~LyVaDs~n~~ii~ivaGs~~g~~G~~dG~~~~a~f~~P~GIAVD~dGnIYVAD~~N~rIrk~d~~G- 161 (495)
+.-..|+.|++|.|||... .++ ..+.+.. +.+-....... .....-..|+.|.+|+|||+-. +.|.+++...
T Consensus 88 n~I~~i~~d~~g~lWigT~--~Gl-~~yd~~~-~~f~~~~~~~~-~~~~~i~~i~~d~~g~lwi~t~--~gl~~~~~~~~ 160 (795)
T 4a2l_A 88 DISRIVKTDSQGRVWIGTR--DGL-SRYDEEK-DIFQNFFYEKN-GKHLQVNGIEEISPEQLLISTP--EGLIMFDIKES 160 (795)
T ss_dssp SCEEEEEECTTSCEEEEES--SCE-EEEETTT-TEEEEECCEET-TEECCCCEEEEEETTEEEEEET--TEEEEEETTTT
T ss_pred cceeEEEECCCCCEEEEeC--Cch-heeCCCC-CeEEecccccc-CCCceEEEEEECCCCCEEEEEC--CceEEEECCCC
Confidence 4567889999999999875 223 3333221 11100000000 0000156799999999999964 6789998643
Q ss_pred cEEEecCcccCCCCCCCCCCcCcccCC-CceEEEECCCCeEEEEECCCCeEEEEECCCCceeeCC---CCCCcceEEEEe
Q 011014 162 VTTIAGGKWSRGVGHVDGPSEDAKFSN-DFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCSDNY---DDTFHLGIFVLV 237 (495)
Q Consensus 162 V~tiaGg~~G~~~g~~dG~~~~a~f~~-P~gVa~vd~~G~LyVaD~gN~rI~~~d~~g~~~~~~~---~~g~P~GIAvd~ 237 (495)
....... + ..... ...++ .+.+|.|||...+ +.|.++++.+..+.... ....-..|+.|.
T Consensus 161 ~~~~~~~----------~----~~~~~~i~~i~-~d~~g~lwigt~~-~Gl~~~~~~~~~~~~~~~~~~~~~i~~i~~d~ 224 (795)
T 4a2l_A 161 KFIDDSF----------S----TAMHKTIASTL-YRQGDQIYIGTST-DGLYTYSITQKTFEKVIPILGTKQIQAILQQS 224 (795)
T ss_dssp EEECSSS----------C----HHHHTCCEEEE-EEETTEEEEEESS-SCEEEEETTTCCEEECC----CCCEEEEEEEE
T ss_pred EEEeccC----------C----CCCCcceEEEE-ECCCCCEEEEECC-CCEEEEeCCCCeEEEecCCCCCCeeEEEEEcC
Confidence 2111000 0 00011 34555 6788999998643 35889998776554321 112234566664
Q ss_pred cCcCeEEEEE
Q 011014 238 AAAFFGYMLA 247 (495)
Q Consensus 238 ~a~~~~yv~d 247 (495)
.+.++|..
T Consensus 225 --~g~lwigt 232 (795)
T 4a2l_A 225 --PTRIWVAT 232 (795)
T ss_dssp --TTEEEEEE
T ss_pred --CCCEEEEE
Confidence 45556554
No 133
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=95.09 E-value=1.8 Score=47.52 Aligned_cols=147 Identities=7% Similarity=-0.072 Sum_probs=87.1
Q ss_pred CCceEEEEcCCCcEEEEECCCCeeEEEEcCCCC-ccccccCCCcCccccCCcceEEEcCCCCEEEEECCCCEEEEEcCCC
Q 011014 83 MEPFSVAVSPSGELLVLDSENNSRPKLVAGSPE-GYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMNMAIRKISDTG 161 (495)
Q Consensus 83 ~~P~GIAVd~dG~LyVaDs~n~~ii~ivaGs~~-g~~G~~dG~~~~a~f~~P~GIAVD~dGnIYVAD~~N~rIrk~d~~G 161 (495)
.....|+.|++|+|||+.. .++..+-..+.. ........ .....+...+|+.|.+|+|||+-.+ +-|.+++.++
T Consensus 450 ~~v~~i~~d~~g~lwigt~--~Gl~~~~~~~~~~~~~~~~~~--~~~~~~~i~~i~~d~~g~lWigt~~-~Gl~~~~~~~ 524 (781)
T 3v9f_A 450 LDVRVFYEDKNKKIWIGTH--AGVFVIDLASKKVIHHYDTSN--SQLLENFVRSIAQDSEGRFWIGTFG-GGVGIYTPDM 524 (781)
T ss_dssp CCEEEEEECTTSEEEEEET--TEEEEEESSSSSCCEEECTTT--SSCSCSCEEEEEECTTCCEEEEESS-SCEEEECTTC
T ss_pred CeEEEEEECCCCCEEEEEC--CceEEEeCCCCeEEecccCcc--cccccceeEEEEEcCCCCEEEEEcC-CCEEEEeCCC
Confidence 3567899999999999976 334444322211 11110010 0011245679999999999999753 4488899765
Q ss_pred --cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCcee-eCCCCCCc----ceEE
Q 011014 162 --VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCS-DNYDDTFH----LGIF 234 (495)
Q Consensus 162 --V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~gN~rI~~~d~~g~~~~-~~~~~g~P----~GIA 234 (495)
+..+.. . .+. .-+...+|+ .|.+|+|||+.. ++.|.++++.+..+. +....|+| .+|+
T Consensus 525 ~~~~~~~~-~--------~~l----~~~~i~~i~-~d~~g~lWi~T~-~Glv~~~d~~~~~~~~~~~~~gl~~~~i~~i~ 589 (781)
T 3v9f_A 525 QLVRKFNQ-Y--------EGF----CSNTINQIY-RSSKGQMWLATG-EGLVCFPSARNFDYQVFQRKEGLPNTHIRAIS 589 (781)
T ss_dssp CEEEEECT-T--------TTC----SCSCEEEEE-ECTTSCEEEEET-TEEEEESCTTTCCCEEECGGGTCSCCCCCEEE
T ss_pred CeEEEccC-C--------CCC----CCCeeEEEE-ECCCCCEEEEEC-CCceEEECCCCCcEEEccccCCCCCceEEEEE
Confidence 333311 1 110 012335666 689999999986 444489998775543 33334443 4677
Q ss_pred EEecCcCeEEEEEccCCce
Q 011014 235 VLVAAAFFGYMLALLQRRV 253 (495)
Q Consensus 235 vd~~a~~~~yv~d~~~~Rv 253 (495)
.|. .+.+|++. +..+
T Consensus 590 ~d~--~g~lW~~t--~~Gl 604 (781)
T 3v9f_A 590 EDK--NGNIWAST--NTGI 604 (781)
T ss_dssp ECS--SSCEEEEC--SSCE
T ss_pred ECC--CCCEEEEc--CCce
Confidence 775 56788775 4556
No 134
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=94.97 E-value=1 Score=44.59 Aligned_cols=104 Identities=11% Similarity=0.062 Sum_probs=67.2
Q ss_pred cceEEEcC-CCCEEEEECCC-CEEEEEcCCC--cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEE-ECC
Q 011014 133 PKGLAVDD-RGNIYIADTMN-MAIRKISDTG--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVI-DRG 207 (495)
Q Consensus 133 P~GIAVD~-dGnIYVAD~~N-~rIrk~d~~G--V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVa-D~g 207 (495)
+..+++++ .+.||.+|..+ .+|.+++.+| ...+.-. .+ |. +. ...+.||.+ |..
T Consensus 186 ~~~~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~~~~Lt~~----------------~~--~~-~~--~~g~~Iy~~~~~~ 244 (302)
T 3s25_A 186 NCYKPVVLDDTNVYYMDVNRDNAIVHVNINNPNPVVLTEA----------------NI--EH-YN--VYGSLIFYQRGGD 244 (302)
T ss_dssp CEEEEEEEETTEEEEEEGGGTTEEEEECSSSCCCEECSCS----------------CE--EE-EE--EETTEEEEEECSS
T ss_pred CccceeeecCCEEEEEEcCCCcEEEEEECCCCCeEEEeCC----------------Cc--ce-EE--ECCCEEEEEECCC
Confidence 33445664 56799999764 6999999888 4444210 01 22 33 345688886 677
Q ss_pred CCeEEEEECCCCceeeCCCCCCcceEEEEecCcCeEEEEEccCCceEEEeeCCC
Q 011014 208 NQAIREIQLHDDDCSDNYDDTFHLGIFVLVAAAFFGYMLALLQRRVQAMFSSKD 261 (495)
Q Consensus 208 N~rI~~~d~~g~~~~~~~~~g~P~GIAvd~~a~~~~yv~d~~~~Rv~~~~~s~~ 261 (495)
...|.+++++|.......... ...|++. +..||.++...+.|.++-.+..
T Consensus 245 ~~~i~~~~~DG~~r~~l~~~~-~~~i~i~---~d~Iy~td~~~~~i~~~~~dGs 294 (302)
T 3s25_A 245 NPALCVVKNDGTGFKELAKGE-FCNINVT---SQYVYFTDFVSNKEYCTSTQNP 294 (302)
T ss_dssp SCEEEEEETTSCCCEEEEESC-EEEEEEC---SSEEEEEETTTCCEEEEESSSC
T ss_pred CcEEEEEECCCCccEEeeCCc-cceEEEe---CCEEEEEECCCCeEEEEECCCC
Confidence 799999999997644322111 2355554 6899999998888876654433
No 135
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=94.86 E-value=0.15 Score=55.21 Aligned_cols=97 Identities=14% Similarity=0.009 Sum_probs=69.2
Q ss_pred EcCCCCEEEEECCCCEEEEEcCCC---cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCC-eEEEEECCCCeEEE
Q 011014 138 VDDRGNIYIADTMNMAIRKISDTG---VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSC-SLLVIDRGNQAIRE 213 (495)
Q Consensus 138 VD~dGnIYVAD~~N~rIrk~d~~G---V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G-~LyVaD~gN~rI~~ 213 (495)
.|+.+.+||+....+.|.+||.+. +.++..+ ..|++++ ++.+| .|||++. .+.|.+
T Consensus 163 ~d~~~~~~V~~~~~~~V~viD~~t~~v~~~i~~g------------------~~p~~v~-~SpDGr~lyv~~~-dg~V~v 222 (567)
T 1qks_A 163 WDLENLFSVTLRDAGQIALIDGSTYEIKTVLDTG------------------YAVHISR-LSASGRYLFVIGR-DGKVNM 222 (567)
T ss_dssp CCGGGEEEEEETTTTEEEEEETTTCCEEEEEECS------------------SCEEEEE-ECTTSCEEEEEET-TSEEEE
T ss_pred cCCCceEEEEeCCCCeEEEEECCCCeEEEEEeCC------------------CCccceE-ECCCCCEEEEEcC-CCeEEE
Confidence 455667999999999999999654 4455321 1477888 45555 6899985 568999
Q ss_pred EECC--C-CceeeCCCCCCcceEEEEe---cCcCeEEEEEccCCceE
Q 011014 214 IQLH--D-DDCSDNYDDTFHLGIFVLV---AAAFFGYMLALLQRRVQ 254 (495)
Q Consensus 214 ~d~~--g-~~~~~~~~~g~P~GIAvd~---~a~~~~yv~d~~~~Rv~ 254 (495)
||+. . ...........|.+|++.. -.+..+|+++.+.+.|.
T Consensus 223 iD~~~~t~~~v~~i~~G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ 269 (567)
T 1qks_A 223 IDLWMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYV 269 (567)
T ss_dssp EETTSSSCCEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEETTEEE
T ss_pred EECCCCCCcEeEEEecCCCCceeEEccccCCCCCEEEEEEccCCeEE
Confidence 9994 3 3333333334699999982 13678999999999884
No 136
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=94.76 E-value=1.9 Score=41.77 Aligned_cols=144 Identities=11% Similarity=0.094 Sum_probs=84.2
Q ss_pred CceEEEEcCCCcEEEEECCCCeeEEEEcCCCCccccccCCCcCccccCCcceEEEcCCCCEEEEECCCCEEEEEcCC-C-
Q 011014 84 EPFSVAVSPSGELLVLDSENNSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMNMAIRKISDT-G- 161 (495)
Q Consensus 84 ~P~GIAVd~dG~LyVaDs~n~~ii~ivaGs~~g~~G~~dG~~~~a~f~~P~GIAVD~dGnIYVAD~~N~rIrk~d~~-G- 161 (495)
....++++++|+++++-..+. .+++..-..........+ .-.....|+++++|.++++=...+.|+.+|.. +
T Consensus 166 ~v~~~~~spdg~~lasg~~dg-~i~iwd~~~~~~~~~~~~-----h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~ 239 (321)
T 3ow8_A 166 FILSIAYSPDGKYLASGAIDG-IINIFDIATGKLLHTLEG-----HAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHAN 239 (321)
T ss_dssp CEEEEEECTTSSEEEEEETTS-CEEEEETTTTEEEEEECC-----CSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCC
T ss_pred eEEEEEECCCCCEEEEEcCCC-eEEEEECCCCcEEEEEcc-----cCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcc
Confidence 356788888888766655444 444543211000000011 11234589999999988887778899999943 3
Q ss_pred -cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCceee--CCCCCCcceEEEEec
Q 011014 162 -VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCSD--NYDDTFHLGIFVLVA 238 (495)
Q Consensus 162 -V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~gN~rI~~~d~~g~~~~~--~~~~g~P~GIAvd~~ 238 (495)
+.++.+-. .....++ ..+++.++++-...+.|+.++.....+.. ....+.-.++++..
T Consensus 240 ~~~~~~~h~-----------------~~v~~~~-~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~- 300 (321)
T 3ow8_A 240 LAGTLSGHA-----------------SWVLNVA-FCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNG- 300 (321)
T ss_dssp EEEEECCCS-----------------SCEEEEE-ECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECT-
T ss_pred eeEEEcCCC-----------------CceEEEE-ECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEcCCCCcEEEEEECC-
Confidence 34442210 1234566 46677777777777889999988766643 22233345666664
Q ss_pred CcCeEEEEEccCCce
Q 011014 239 AAFFGYMLALLQRRV 253 (495)
Q Consensus 239 a~~~~yv~d~~~~Rv 253 (495)
.+...++......|
T Consensus 301 -~g~~l~s~~~d~~i 314 (321)
T 3ow8_A 301 -NGSKIVSVGDDQEI 314 (321)
T ss_dssp -TSSEEEEEETTCCE
T ss_pred -CCCEEEEEeCCCeE
Confidence 33445555555555
No 137
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=94.61 E-value=3 Score=40.28 Aligned_cols=149 Identities=13% Similarity=0.168 Sum_probs=85.8
Q ss_pred CceEEEEcCCCcEEEEECCCCeeEEEEcCCCCccccccCCCcCccccCCcceEEEcCCCCEEEEECCCCEEEEEcC-CC-
Q 011014 84 EPFSVAVSPSGELLVLDSENNSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMNMAIRKISD-TG- 161 (495)
Q Consensus 84 ~P~GIAVd~dG~LyVaDs~n~~ii~ivaGs~~g~~G~~dG~~~~a~f~~P~GIAVD~dGnIYVAD~~N~rIrk~d~-~G- 161 (495)
....++++++|+++++-.... .+.++.-........... .-.....++++++|+++++=..++.|+.+|. .+
T Consensus 124 ~~~~~~~spdg~~l~~g~~dg-~v~i~~~~~~~~~~~~~~-----~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~ 197 (321)
T 3ow8_A 124 DAWTLAFSPDSQYLATGTHVG-KVNIFGVESGKKEYSLDT-----RGKFILSIAYSPDGKYLASGAIDGIINIFDIATGK 197 (321)
T ss_dssp CCCCEEECTTSSEEEEECTTS-EEEEEETTTCSEEEEEEC-----SSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE
T ss_pred cEEEEEECCCCCEEEEEcCCC-cEEEEEcCCCceeEEecC-----CCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCc
Confidence 345688888888777766555 444443211000000000 1123458999999998888777889999994 44
Q ss_pred -cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCceee--CCCCCCcceEEEEec
Q 011014 162 -VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCSD--NYDDTFHLGIFVLVA 238 (495)
Q Consensus 162 -V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~gN~rI~~~d~~g~~~~~--~~~~g~P~GIAvd~~ 238 (495)
+.++.+-. ..-..++ ..+++.++++-...+.|+.++.....+.. ....+.-..+++..
T Consensus 198 ~~~~~~~h~-----------------~~v~~l~-~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp- 258 (321)
T 3ow8_A 198 LLHTLEGHA-----------------MPIRSLT-FSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCP- 258 (321)
T ss_dssp EEEEECCCS-----------------SCCCEEE-ECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEEECT-
T ss_pred EEEEEcccC-----------------CceeEEE-EcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEEECC-
Confidence 44442210 1234566 56777777777777889999887655432 22223345566654
Q ss_pred CcCeEEEEEccCCceEEEeeC
Q 011014 239 AAFFGYMLALLQRRVQAMFSS 259 (495)
Q Consensus 239 a~~~~yv~d~~~~Rv~~~~~s 259 (495)
.+...++......| +++.-
T Consensus 259 -~~~~l~s~s~D~~v-~iwd~ 277 (321)
T 3ow8_A 259 -DDTHFVSSSSDKSV-KVWDV 277 (321)
T ss_dssp -TSSEEEEEETTSCE-EEEET
T ss_pred -CCCEEEEEeCCCcE-EEEeC
Confidence 33445555555666 34443
No 138
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=94.42 E-value=0.19 Score=48.69 Aligned_cols=101 Identities=21% Similarity=0.203 Sum_probs=59.0
Q ss_pred CceEEEEcCCCcEEEEECCCCeeEEEEcCCC--------CccccccCCCcCccccCCcceEEEcCCCCEEEEECCCCEEE
Q 011014 84 EPFSVAVSPSGELLVLDSENNSRPKLVAGSP--------EGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMNMAIR 155 (495)
Q Consensus 84 ~P~GIAVd~dG~LyVaDs~n~~ii~ivaGs~--------~g~~G~~dG~~~~a~f~~P~GIAVD~dGnIYVAD~~N~rIr 155 (495)
.-..||++|+|.||++. +....++-..+. ....|.. | -..| ..|.+|++|+||++ + +.+|+
T Consensus 42 ~~~~laf~P~G~LYaV~--~G~Ly~~~~~t~~~~~W~~s~t~IG~~-G---w~~F---~a~~fD~~G~LYav-~-dG~iy 110 (236)
T 1tl2_A 42 NFKFLFLSPGGELYGVL--NDKIYKGTPPTHDNDNWMGRAKKIGNG-G---WNQF---QFLFFDPNGYLYAV-S-KDKLY 110 (236)
T ss_dssp TCSEEEECTTSCEEEEE--TTEEEEESCCCSTTCCHHHHCEEEECS-C---GGGC---SEEEECTTSCEEEE-E-TTEEE
T ss_pred cceeEEECCCccEEEEe--CCeEEEECCCCCCcccccccccEeccc-c---cccc---eEEEECCCCCEEEe-C-CCEEE
Confidence 56699999999999992 222333221110 0111110 0 0012 38999999999999 3 59999
Q ss_pred EEcC--CCc-------EEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECCCCeEEEE
Q 011014 156 KISD--TGV-------TTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREI 214 (495)
Q Consensus 156 k~d~--~GV-------~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~gN~rI~~~ 214 (495)
++++ ++- ++| |. .|. ..| ..|+ .+++|.||-++ +.++.+-
T Consensus 111 r~~pP~~~~~~Wl~~a~~v-g~-----~gw-------~~~---~~lf-f~p~G~Lyav~--dg~lyr~ 159 (236)
T 1tl2_A 111 KASPPQSDTDNWIARATEV-GS-----GGW-------SGF---KFLF-FHPNGYLYAVH--GQQFYKA 159 (236)
T ss_dssp EESCCCSTTCCHHHHSEEE-EC-----SSG-------GGE---EEEE-ECTTSCEEEEE--TTEEEEE
T ss_pred EeCCCcCCCCceeccccEe-cc-----CCC-------Cce---EEEE-ECCCceEEEEe--CCcEEec
Confidence 9995 441 222 21 010 112 3444 79999999999 4456543
No 139
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=94.01 E-value=2.6 Score=39.30 Aligned_cols=143 Identities=7% Similarity=-0.087 Sum_probs=79.1
Q ss_pred CceEEEEcCCCcEEEEECCCCeeEEEEcCCCCccccccCCCcCccccCCcceEEEcCCCCEEEEECCCCEEEEEcCCC--
Q 011014 84 EPFSVAVSPSGELLVLDSENNSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMNMAIRKISDTG-- 161 (495)
Q Consensus 84 ~P~GIAVd~dG~LyVaDs~n~~ii~ivaGs~~g~~G~~dG~~~~a~f~~P~GIAVD~dGnIYVAD~~N~rIrk~d~~G-- 161 (495)
....++++++|+++++-..+. .+.++.-......... ..-.....++++++|+++++-..++.|+.++...
T Consensus 185 ~i~~~~~~~~~~~l~~~~~dg-~i~~~d~~~~~~~~~~------~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~ 257 (337)
T 1gxr_A 185 GASCIDISNDGTKLWTGGLDN-TVRSWDLREGRQLQQH------DFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPD 257 (337)
T ss_dssp CEEEEEECTTSSEEEEEETTS-EEEEEETTTTEEEEEE------ECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSC
T ss_pred ceEEEEECCCCCEEEEEecCC-cEEEEECCCCceEeee------cCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCC
Confidence 456777777776555544443 3444431110000000 0112356889999998777777788899998544
Q ss_pred cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCceee-CCCCCCcceEEEEecCc
Q 011014 162 VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCSD-NYDDTFHLGIFVLVAAA 240 (495)
Q Consensus 162 V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~gN~rI~~~d~~g~~~~~-~~~~g~P~GIAvd~~a~ 240 (495)
...+.+. -.....++ ..+++.++++-..++.|+.++........ ....+....+++.. .
T Consensus 258 ~~~~~~~-----------------~~~v~~~~-~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~v~~~~~s~--~ 317 (337)
T 1gxr_A 258 KYQLHLH-----------------ESCVLSLK-FAYCGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISV--D 317 (337)
T ss_dssp EEEECCC-----------------SSCEEEEE-ECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECT--T
T ss_pred eEEEcCC-----------------ccceeEEE-ECCCCCEEEEecCCCcEEEEECCCCeEEEEecCCCcEEEEEECC--C
Confidence 3333110 11345566 56677766666677889999987765543 22333455666654 3
Q ss_pred CeEEEEEccCCce
Q 011014 241 FFGYMLALLQRRV 253 (495)
Q Consensus 241 ~~~yv~d~~~~Rv 253 (495)
+...++......|
T Consensus 318 ~~~l~~~~~dg~i 330 (337)
T 1gxr_A 318 DKYIVTGSGDKKA 330 (337)
T ss_dssp SCEEEEEETTSCE
T ss_pred CCEEEEecCCCeE
Confidence 3334444455555
No 140
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=93.94 E-value=1.5 Score=45.22 Aligned_cols=129 Identities=13% Similarity=0.178 Sum_probs=76.0
Q ss_pred CceEEEEcCCCcEEEEECCCCeeEEEEcCCCCccccccCCCcCccccCCcceEEEcCCCCEEEEECCCCEEEEEcCCC--
Q 011014 84 EPFSVAVSPSGELLVLDSENNSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMNMAIRKISDTG-- 161 (495)
Q Consensus 84 ~P~GIAVd~dG~LyVaDs~n~~ii~ivaGs~~g~~G~~dG~~~~a~f~~P~GIAVD~dGnIYVAD~~N~rIrk~d~~G-- 161 (495)
.-.+|++.+++.++++-..+. .+++..-+..-. ....+ .-.....|+++++|.++++=..++.|+.++.+|
T Consensus 428 ~v~~~~~s~d~~~l~~~~~d~-~v~~w~~~~~~~-~~~~~-----~~~~v~~~~~spd~~~las~~~d~~i~iw~~~~~~ 500 (577)
T 2ymu_A 428 SVWGVAFSPDDQTIASASDDK-TVKLWNRNGQLL-QTLTG-----HSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQL 500 (577)
T ss_dssp CEEEEEECTTSSEEEEEETTS-EEEEEETTSCEE-EEEEC-----CSSCEEEEEECTTSCEEEEEETTSEEEEEETTSCE
T ss_pred CeEEEEECCCCCEEEEEcCCC-EEEEEECCCCEE-EEEcC-----CCCCEEEEEEcCCCCEEEEEeCCCEEEEEcCCCCE
Confidence 346788888887766655444 444443221000 00000 112346899999999888877789999999877
Q ss_pred cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCceeeCCC-CCCcceEEEEe
Q 011014 162 VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCSDNYD-DTFHLGIFVLV 237 (495)
Q Consensus 162 V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~gN~rI~~~d~~g~~~~~~~~-~g~P~GIAvd~ 237 (495)
+.++.+-. .....|+ ..++|.++++-...+.|+.++..+..+....+ .+.-.++++..
T Consensus 501 ~~~~~~h~-----------------~~v~~l~-~s~dg~~l~s~~~dg~v~lwd~~~~~~~~~~~h~~~v~~~~fs~ 559 (577)
T 2ymu_A 501 LQTLTGHS-----------------SSVRGVA-FSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSP 559 (577)
T ss_dssp EEEEECCS-----------------SCEEEEE-ECTTSSCEEEEETTSEEEEECTTSCEEEEEECCSSCEEEEEECT
T ss_pred EEEEeCCC-----------------CCEEEEE-EcCCCCEEEEEECcCEEEEEeCCCCEEEEEcCCCCCEEEEEEcC
Confidence 45553311 1234566 46667666665566788888877765544322 23345566654
No 141
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=93.88 E-value=2.7 Score=40.68 Aligned_cols=73 Identities=12% Similarity=0.064 Sum_probs=49.0
Q ss_pred cceEEEcCCCCEEEEECCCCEEEEEcCC-C--cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECCCC
Q 011014 133 PKGLAVDDRGNIYIADTMNMAIRKISDT-G--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQ 209 (495)
Q Consensus 133 P~GIAVD~dGnIYVAD~~N~rIrk~d~~-G--V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~gN~ 209 (495)
...|+++++|+++++=...+.|+.+|.. + +.++... .....-..++ ..++|.++++-..++
T Consensus 229 v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~---------------~~~~~v~~~~-~s~~g~~l~~g~~d~ 292 (340)
T 1got_B 229 INAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHD---------------NIICGITSVS-FSKSGRLLLAGYDDF 292 (340)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCT---------------TCCSCEEEEE-ECTTSSEEEEEETTS
T ss_pred EEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccC---------------CcccceEEEE-ECCCCCEEEEECCCC
Confidence 4589999999988888788899999944 3 3333110 0011234555 577788877777788
Q ss_pred eEEEEECCCCce
Q 011014 210 AIREIQLHDDDC 221 (495)
Q Consensus 210 rI~~~d~~g~~~ 221 (495)
.|+.++.....+
T Consensus 293 ~i~vwd~~~~~~ 304 (340)
T 1got_B 293 NCNVWDALKADR 304 (340)
T ss_dssp EEEEEETTTCCE
T ss_pred eEEEEEcccCcE
Confidence 899998765443
No 142
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=93.83 E-value=0.59 Score=48.31 Aligned_cols=101 Identities=15% Similarity=0.197 Sum_probs=66.6
Q ss_pred CceEEEEcCC----C-cEEEEECCCCeeEEEEc-----CCC---CccccccCCCcCccccCCcceEEEc-CCCCEEEEEC
Q 011014 84 EPFSVAVSPS----G-ELLVLDSENNSRPKLVA-----GSP---EGYYGHVDGRPRGARMNHPKGLAVD-DRGNIYIADT 149 (495)
Q Consensus 84 ~P~GIAVd~d----G-~LyVaDs~n~~ii~iva-----Gs~---~g~~G~~dG~~~~a~f~~P~GIAVD-~dGnIYVAD~ 149 (495)
.-.|||++++ + .||+.--.......+-. .+. ....|. .| ......++++| .+|+||+++.
T Consensus 221 Gi~gIaLsp~~~~~~~~LYf~plss~~ly~V~T~~L~~~~~~~~v~~~G~-kg-----~~s~~~~~~~D~~~G~ly~~~~ 294 (381)
T 3q6k_A 221 GIFGITLGDRDSEGNRPAYYLAGSAIKVYSVNTKELKQKGGKLNPELLGN-RG-----KYNDAIALAYDPKTKVIFFAEA 294 (381)
T ss_dssp CEEEEEECCCCTTSCCEEEEEESSCSEEEEEEHHHHSSTTCCCCCEEEEE-CC-----TTCCEEEEEECTTTCEEEEEES
T ss_pred CceEEEecCCcCCCCeEEEEEECCCCcEEEEEHHHhhCcchhhceEEeee-cC-----CCCCcceEEEeCCCCeEEEEec
Confidence 5679999885 3 48888866654444421 111 011111 00 01223467897 7999999999
Q ss_pred CCCEEEEEcCCC-------cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEEC
Q 011014 150 MNMAIRKISDTG-------VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDR 206 (495)
Q Consensus 150 ~N~rIrk~d~~G-------V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~ 206 (495)
.++.|..+++++ +.+++- +..|..|.++. ++.+|.|||...
T Consensus 295 ~~~aI~~w~~~~~~~~~~n~~~l~~---------------d~~l~~pd~~~-i~~~g~Lwv~sn 342 (381)
T 3q6k_A 295 NTKQVSCWNTQKMPLRMKNTDVVYT---------------SSRFVFGTDIS-VDSKGGLWFMSN 342 (381)
T ss_dssp SSSEEEEEETTSCSBCGGGEEEEEE---------------CTTCCSEEEEE-ECTTSCEEEEEC
T ss_pred cCCeEEEEeCCCCccccCceEEEEE---------------CCCccccCeEE-ECCCCeEEEEEC
Confidence 999999999765 344431 22688999998 788999999873
No 143
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=93.75 E-value=1.6 Score=48.17 Aligned_cols=150 Identities=7% Similarity=-0.005 Sum_probs=86.3
Q ss_pred CceEEEEcCCCcEEEEECCCCeeEEEEcCCCCccccccCCCcCccccCCcceEEEcCCCCEEEEECCCCEEEEEcCCC--
Q 011014 84 EPFSVAVSPSGELLVLDSENNSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMNMAIRKISDTG-- 161 (495)
Q Consensus 84 ~P~GIAVd~dG~LyVaDs~n~~ii~ivaGs~~g~~G~~dG~~~~a~f~~P~GIAVD~dGnIYVAD~~N~rIrk~d~~G-- 161 (495)
....|+.|++|+|||+.. + ++.++-..+..-.... ........-+...+|+.|.+|+|||+-.. .|.+++...
T Consensus 499 ~i~~i~~d~~g~lWigt~-~-Gl~~~~~~~~~~~~~~-~~~~~~l~~~~i~~i~~d~~g~lWigT~~--Gl~~~d~~~~~ 573 (795)
T 4a2l_A 499 QITTLFRDSHKRLWIGGE-E-GLSVFKQEGLDIQKAS-ILPVSNVTKLFTNCIYEASNGIIWVGTRE--GFYCFNEKDKQ 573 (795)
T ss_dssp CEEEEEECTTCCEEEEES-S-CEEEEEEETTEEEECC-CSCSCGGGGSCEEEEEECTTSCEEEEESS--CEEEEETTTTE
T ss_pred eEEEEEECCCCCEEEEeC-C-ceEEEeCCCCeEEEec-CCCCCCCCCCeeEEEEECCCCCEEEEeCC--CceeECCCCCc
Confidence 457889999999999987 3 3444322111001000 00000011234568999999999999753 789999654
Q ss_pred cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCceee-CCCCCCc------ceEE
Q 011014 162 VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCSD-NYDDTFH------LGIF 234 (495)
Q Consensus 162 V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~gN~rI~~~d~~g~~~~~-~~~~g~P------~GIA 234 (495)
+..+ .... |... +.-.+|+ .|.+|+|||+- ++.|.+|+++...+.. ....|+| .+++
T Consensus 574 ~~~~-~~~~--------gl~~----~~i~~i~-~d~~g~lWi~t--~~Gl~~~~~~~~~~~~~~~~dGl~~~~f~~~~~~ 637 (795)
T 4a2l_A 574 IKRY-NTTN--------GLPN----NVVYGIL-EDSFGRLWLST--NRGISCFNPETEKFRNFTESDGLQSNQFNTASYC 637 (795)
T ss_dssp EEEE-CGGG--------TCSC----SCEEEEE-ECTTSCEEEEE--TTEEEEEETTTTEEEEECGGGTCSCSCEEEEEEE
T ss_pred EEEe-CCCC--------CCch----hheEEEE-ECCCCCEEEEc--CCceEEEcCCCCcEEEcCCcCCCccccCccCcee
Confidence 3333 2111 1111 1224565 78999999998 5789999998876653 3334443 3444
Q ss_pred EEecCcCeEEEEEccCCceEEEeeCC
Q 011014 235 VLVAAAFFGYMLALLQRRVQAMFSSK 260 (495)
Q Consensus 235 vd~~a~~~~yv~d~~~~Rv~~~~~s~ 260 (495)
.+. .+.+|+... ..+ ..|+.
T Consensus 638 ~~~--~G~l~~g~~--~Gl--~~~~p 657 (795)
T 4a2l_A 638 RTS--VGQMYFGGI--NGI--TTFRP 657 (795)
T ss_dssp ECT--TSCEEEEET--TEE--EEECG
T ss_pred ECC--CCeEEEecC--Cce--EEEcH
Confidence 443 566777654 355 44443
No 144
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=93.65 E-value=1 Score=47.74 Aligned_cols=115 Identities=15% Similarity=0.148 Sum_probs=75.7
Q ss_pred cCCcceEEEcCCCCEEEEECCC------CEEEEEcCCC---cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCe
Q 011014 130 MNHPKGLAVDDRGNIYIADTMN------MAIRKISDTG---VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCS 200 (495)
Q Consensus 130 f~~P~GIAVD~dGnIYVAD~~N------~rIrk~d~~G---V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~ 200 (495)
+..|.++...++| |||+..++ +.|.++|... +.++.- +. + . -..+.++.+....+.
T Consensus 137 ~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~---~~------~---~--~~~~Yd~~~~p~~~~ 201 (462)
T 2ece_A 137 YSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDHYSFEPLGKWEI---DR------G---D--QYLAYDFWWNLPNEV 201 (462)
T ss_dssp EEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECTTTCCEEEECCS---BC------T---T--CCCCCCEEEETTTTE
T ss_pred CCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEcc---CC------C---C--ccccceEEECCCCCE
Confidence 3479999999999 99988876 7999999764 333321 10 0 0 113445665555556
Q ss_pred EEEEECC------------------CCeEEEEECCCCceee---CC-CCCCcceEEEE-ecCcCeEEEEEc-----cCCc
Q 011014 201 LLVIDRG------------------NQAIREIQLHDDDCSD---NY-DDTFHLGIFVL-VAAAFFGYMLAL-----LQRR 252 (495)
Q Consensus 201 LyVaD~g------------------N~rI~~~d~~g~~~~~---~~-~~g~P~GIAvd-~~a~~~~yv~d~-----~~~R 252 (495)
+|+++++ .++|..++++...... .+ ....|..|.+. ...+..+||++- +.+.
T Consensus 202 mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~ 281 (462)
T 2ece_A 202 LVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSS 281 (462)
T ss_dssp EEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEE
T ss_pred EEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCce
Confidence 7777743 8999999998754432 22 22368888872 223568999998 8888
Q ss_pred eEEEeeC
Q 011014 253 VQAMFSS 259 (495)
Q Consensus 253 v~~~~~s 259 (495)
|..+..+
T Consensus 282 V~v~~~d 288 (462)
T 2ece_A 282 IWLWFYE 288 (462)
T ss_dssp EEEEEEE
T ss_pred EEEEEec
Confidence 8544443
No 145
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=93.56 E-value=4.7 Score=37.53 Aligned_cols=143 Identities=8% Similarity=0.098 Sum_probs=79.5
Q ss_pred CceEEEEcCCCcEEEEECCCCeeEEEEcCCCCccccccCCCcCccccCCcceEEEcCCCCEEEEECCCCEEEEEcCC-C-
Q 011014 84 EPFSVAVSPSGELLVLDSENNSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMNMAIRKISDT-G- 161 (495)
Q Consensus 84 ~P~GIAVd~dG~LyVaDs~n~~ii~ivaGs~~g~~G~~dG~~~~a~f~~P~GIAVD~dGnIYVAD~~N~rIrk~d~~-G- 161 (495)
....++++++|+++++-..+. .+.+..-..........+ .-.....++++++|+++++-..++.|+.+|.. +
T Consensus 143 ~i~~~~~~~~~~~l~~~~~dg-~v~~~d~~~~~~~~~~~~-----~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~ 216 (337)
T 1gxr_A 143 ACYALAISPDSKVCFSCCSDG-NIAVWDLHNQTLVRQFQG-----HTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGR 216 (337)
T ss_dssp CEEEEEECTTSSEEEEEETTS-CEEEEETTTTEEEEEECC-----CSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTE
T ss_pred ceEEEEECCCCCEEEEEeCCC-cEEEEeCCCCceeeeeec-----ccCceEEEEECCCCCEEEEEecCCcEEEEECCCCc
Confidence 356788888887655544433 344432111000000000 11245689999999877777778999999954 4
Q ss_pred -cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCceee-CCCCCCcceEEEEecC
Q 011014 162 -VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCSD-NYDDTFHLGIFVLVAA 239 (495)
Q Consensus 162 -V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~gN~rI~~~d~~g~~~~~-~~~~g~P~GIAvd~~a 239 (495)
+..+.. -.....++ ..+++.++++-..++.|+.++........ ....+....+++..
T Consensus 217 ~~~~~~~------------------~~~v~~~~-~s~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~v~~~~~~~-- 275 (337)
T 1gxr_A 217 QLQQHDF------------------TSQIFSLG-YCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAY-- 275 (337)
T ss_dssp EEEEEEC------------------SSCEEEEE-ECTTSSEEEEEETTSCEEEEETTSSCEEEECCCSSCEEEEEECT--
T ss_pred eEeeecC------------------CCceEEEE-ECCCCCEEEEEcCCCcEEEEECCCCCeEEEcCCccceeEEEECC--
Confidence 223211 01234455 45666666665667788888887765543 22333456666664
Q ss_pred cCeEEEEEccCCce
Q 011014 240 AFFGYMLALLQRRV 253 (495)
Q Consensus 240 ~~~~yv~d~~~~Rv 253 (495)
.+...++......|
T Consensus 276 ~~~~l~~~~~dg~i 289 (337)
T 1gxr_A 276 CGKWFVSTGKDNLL 289 (337)
T ss_dssp TSSEEEEEETTSEE
T ss_pred CCCEEEEecCCCcE
Confidence 33444555555556
No 146
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=93.39 E-value=0.66 Score=50.69 Aligned_cols=110 Identities=16% Similarity=0.164 Sum_probs=66.6
Q ss_pred ccccCCcceEEEcC-CCCEEEEECCC---------------------CEEEEEcCCC-----------cEEEecCcccCC
Q 011014 127 GARMNHPKGLAVDD-RGNIYIADTMN---------------------MAIRKISDTG-----------VTTIAGGKWSRG 173 (495)
Q Consensus 127 ~a~f~~P~GIAVD~-dGnIYVAD~~N---------------------~rIrk~d~~G-----------V~tiaGg~~G~~ 173 (495)
...|.+|.||++++ +|.||||-+.| +.|.++..++ +..++|......
T Consensus 380 AT~f~RpEgi~~~p~~g~vY~a~Tn~~~rg~~~~~~~~~np~~~n~~G~I~r~~~~~~d~~a~~f~w~~~v~~g~p~~~~ 459 (592)
T 3zwu_A 380 ATRMDRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHA 459 (592)
T ss_dssp CCCEECEEEEEECTTTCCEEEEECCBTTTTSTTCCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTST
T ss_pred eEEEeccceeEEcCCCCEEEEEecCCcccccCcccccccccccCCcceeEEEEecCCCccccceeEEEEEEeccCccccc
Confidence 45799999999997 89999998753 4688887322 122222111000
Q ss_pred C---CCCCCCCcCcccCCCceEEEECCCCeEEEEEC------------CCCeEEEEECCCCceee---CCCCCCcceEEE
Q 011014 174 V---GHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDR------------GNQAIREIQLHDDDCSD---NYDDTFHLGIFV 235 (495)
Q Consensus 174 ~---g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~------------gN~rI~~~d~~g~~~~~---~~~~g~P~GIAv 235 (495)
. +..........|+.|-.|+ +++.|+|||+.- +|+.+..+++....+.. .....-..|+++
T Consensus 460 ~~~~~~~~~~~~~~~f~~PDNL~-fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~f 538 (592)
T 3zwu_A 460 GTPKGGSSNITPQNMFNSPDGLG-FDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISF 538 (592)
T ss_dssp TSGGGCCTTCCTTTCCCCEEEEE-ECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEE
T ss_pred ccccccccccCCCCCccCCcceE-ECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeE
Confidence 0 0011122344699999999 689999999864 35677777766544321 111123567766
Q ss_pred Ee
Q 011014 236 LV 237 (495)
Q Consensus 236 d~ 237 (495)
..
T Consensus 539 sp 540 (592)
T 3zwu_A 539 SP 540 (592)
T ss_dssp CT
T ss_pred CC
Confidence 64
No 147
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=93.32 E-value=3.4 Score=42.43 Aligned_cols=143 Identities=13% Similarity=0.137 Sum_probs=81.2
Q ss_pred CceEEEEcCCCcEEEEECCCCeeEEEEcCCCCccccccCCCcCccccCCcceEEEcCCCCEEEEECCCCEEEEEcCCC--
Q 011014 84 EPFSVAVSPSGELLVLDSENNSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMNMAIRKISDTG-- 161 (495)
Q Consensus 84 ~P~GIAVd~dG~LyVaDs~n~~ii~ivaGs~~g~~G~~dG~~~~a~f~~P~GIAVD~dGnIYVAD~~N~rIrk~d~~G-- 161 (495)
...+++++++|..+++-..+. .+++..-+..-..-. . ..-....+|+++++|+.+++=..++.|+.++.++
T Consensus 346 ~v~~~~~s~~g~~l~~~~~dg-~v~~~~~~~~~~~~~-~-----~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~~~~~ 418 (577)
T 2ymu_A 346 SVWGVAFSPDGQTIASASDDK-TVKLWNRNGQLLQTL-T-----GHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQL 418 (577)
T ss_dssp CEEEEEECTTSSEEEEEETTS-EEEEEETTCCEEEEE-E-----CCSSCEEEEEECTTSSCEEEEETTSEEEEECTTCCE
T ss_pred CEEEEEECCCCCEEEEEeCCC-EEEEEcCCCCEEEEe-c-----CCCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCE
Confidence 457888999888776655444 455543221100000 0 0112456899999999777766788999999777
Q ss_pred cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCceeeCCC-CCCcceEEEEecCc
Q 011014 162 VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCSDNYD-DTFHLGIFVLVAAA 240 (495)
Q Consensus 162 V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~gN~rI~~~d~~g~~~~~~~~-~g~P~GIAvd~~a~ 240 (495)
+.++.+-. ..-.+++ +.+++.++++-..++.|+.++.++..+..... .+....+++.. .
T Consensus 419 ~~~~~~~~-----------------~~v~~~~-~s~d~~~l~~~~~d~~v~~w~~~~~~~~~~~~~~~~v~~~~~sp--d 478 (577)
T 2ymu_A 419 LQTLTGHS-----------------SSVWGVA-FSPDDQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSP--D 478 (577)
T ss_dssp EEEEECCS-----------------SCEEEEE-ECTTSSEEEEEETTSEEEEEETTSCEEEEEECCSSCEEEEEECT--T
T ss_pred EEEecCCC-----------------CCeEEEE-ECCCCCEEEEEcCCCEEEEEECCCCEEEEEcCCCCCEEEEEEcC--C
Confidence 44443311 0123455 45566666655566778888877665543222 22335566654 3
Q ss_pred CeEEEEEccCCce
Q 011014 241 FFGYMLALLQRRV 253 (495)
Q Consensus 241 ~~~yv~d~~~~Rv 253 (495)
+...++......|
T Consensus 479 ~~~las~~~d~~i 491 (577)
T 2ymu_A 479 GQTIASASDDKTV 491 (577)
T ss_dssp SCEEEEEETTSEE
T ss_pred CCEEEEEeCCCEE
Confidence 3444555555555
No 148
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=93.16 E-value=5.7 Score=37.31 Aligned_cols=144 Identities=14% Similarity=0.125 Sum_probs=78.8
Q ss_pred CceEEEEcCCCcEEEEECCCCeeEEEEcCCCCccccccCCCcCccccCCcceEEEcCCCCEEEEECCCCEEEEEcC-CC-
Q 011014 84 EPFSVAVSPSGELLVLDSENNSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMNMAIRKISD-TG- 161 (495)
Q Consensus 84 ~P~GIAVd~dG~LyVaDs~n~~ii~ivaGs~~g~~G~~dG~~~~a~f~~P~GIAVD~dGnIYVAD~~N~rIrk~d~-~G- 161 (495)
.-..|+++++|+++++-.... .+++..-..........+ .-..-..|+++++|+++++=..++.|++++. .+
T Consensus 25 ~v~~~~~s~~~~~l~s~~~dg-~i~iw~~~~~~~~~~~~~-----h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~ 98 (312)
T 4ery_A 25 AVSSVKFSPNGEWLASSSADK-LIKIWGAYDGKFEKTISG-----HKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGK 98 (312)
T ss_dssp CEEEEEECTTSSEEEEEETTS-CEEEEETTTCCEEEEECC-----CSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC
T ss_pred cEEEEEECCCCCEEEEeeCCC-eEEEEeCCCcccchhhcc-----CCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCc
Confidence 356788888888666654443 344442111000000000 1123458999999998888777899999994 34
Q ss_pred -cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCceee-CCC-CCCcceEEEEec
Q 011014 162 -VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCSD-NYD-DTFHLGIFVLVA 238 (495)
Q Consensus 162 -V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~gN~rI~~~d~~g~~~~~-~~~-~g~P~GIAvd~~ 238 (495)
+.++.+.. ..-..++ ..+++.++++-..++.|+.+++....+.. ... .+.-..+++..
T Consensus 99 ~~~~~~~~~-----------------~~v~~~~-~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~- 159 (312)
T 4ery_A 99 CLKTLKGHS-----------------NYVFCCN-FNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNR- 159 (312)
T ss_dssp EEEEEECCS-----------------SCEEEEE-ECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECT-
T ss_pred EEEEEcCCC-----------------CCEEEEE-EcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcC-
Confidence 44443311 0123344 45666666666667788888877655432 222 22234555554
Q ss_pred CcCeEEEEEccCCce
Q 011014 239 AAFFGYMLALLQRRV 253 (495)
Q Consensus 239 a~~~~yv~d~~~~Rv 253 (495)
.+...++......|
T Consensus 160 -~~~~l~~~~~d~~i 173 (312)
T 4ery_A 160 -DGSLIVSSSYDGLC 173 (312)
T ss_dssp -TSSEEEEEETTSCE
T ss_pred -CCCEEEEEeCCCcE
Confidence 33445555555556
No 149
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=93.01 E-value=2.3 Score=46.71 Aligned_cols=151 Identities=10% Similarity=0.006 Sum_probs=87.6
Q ss_pred CCceEEEEcCCCcEEEEECCCCeeEEEEcCCCC-ccccccCCCcCccccCCcceEEEcCCCCEEEEECCCCEEEEEcCCC
Q 011014 83 MEPFSVAVSPSGELLVLDSENNSRPKLVAGSPE-GYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMNMAIRKISDTG 161 (495)
Q Consensus 83 ~~P~GIAVd~dG~LyVaDs~n~~ii~ivaGs~~-g~~G~~dG~~~~a~f~~P~GIAVD~dGnIYVAD~~N~rIrk~d~~G 161 (495)
....+|+.|++|+|||+...+. +.++-..... ......++. .-+...+|+.|.+|+|||+-. ++-|.+++...
T Consensus 495 ~~i~~i~~d~~g~lWigt~~~G-l~~~~~~~~~~~~~~~~~~l----~~~~i~~i~~d~~g~lWi~T~-~Glv~~~d~~~ 568 (781)
T 3v9f_A 495 NFVRSIAQDSEGRFWIGTFGGG-VGIYTPDMQLVRKFNQYEGF----CSNTINQIYRSSKGQMWLATG-EGLVCFPSARN 568 (781)
T ss_dssp SCEEEEEECTTCCEEEEESSSC-EEEECTTCCEEEEECTTTTC----SCSCEEEEEECTTSCEEEEET-TEEEEESCTTT
T ss_pred ceeEEEEEcCCCCEEEEEcCCC-EEEEeCCCCeEEEccCCCCC----CCCeeEEEEECCCCCEEEEEC-CCceEEECCCC
Confidence 4568899999999999986444 4433221110 001100110 123456899999999999975 44338998654
Q ss_pred --cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCceee-CCCCCCc------ce
Q 011014 162 --VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCSD-NYDDTFH------LG 232 (495)
Q Consensus 162 --V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~gN~rI~~~d~~g~~~~~-~~~~g~P------~G 232 (495)
+..+ .... |... +.-.+++ .|.+|+||++- ++.|.+|+++...+.. ....|++ ..
T Consensus 569 ~~~~~~-~~~~--------gl~~----~~i~~i~-~d~~g~lW~~t--~~Gl~~~~~~~~~~~~~~~~dGl~~~~f~~~~ 632 (781)
T 3v9f_A 569 FDYQVF-QRKE--------GLPN----THIRAIS-EDKNGNIWAST--NTGISCYITSKKCFYTYDHSNNIPQGSFISGC 632 (781)
T ss_dssp CCCEEE-CGGG--------TCSC----CCCCEEE-ECSSSCEEEEC--SSCEEEEETTTTEEEEECGGGTCCSSCEEEEE
T ss_pred CcEEEc-cccC--------CCCC----ceEEEEE-ECCCCCEEEEc--CCceEEEECCCCceEEecccCCccccccccCc
Confidence 4443 2111 1111 1234676 78999999996 4569999998776543 3333443 23
Q ss_pred EEEEecCcCeEEEEEccCCceEEEeeCCC
Q 011014 233 IFVLVAAAFFGYMLALLQRRVQAMFSSKD 261 (495)
Q Consensus 233 IAvd~~a~~~~yv~d~~~~Rv~~~~~s~~ 261 (495)
++.+. .+.+|+.... .+ ..|+.+
T Consensus 633 ~~~~~--~G~l~~g~~~--Gl--~~f~p~ 655 (781)
T 3v9f_A 633 VTKDH--NGLIYFGSIN--GL--CFFNPD 655 (781)
T ss_dssp EEECT--TSCEEEEETT--EE--EEECSC
T ss_pred eEECC--CCEEEEECCC--ce--EEEChh
Confidence 44443 5667776543 55 445544
No 150
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=92.31 E-value=5.3 Score=38.57 Aligned_cols=129 Identities=14% Similarity=0.084 Sum_probs=67.6
Q ss_pred CceEEEEcCCCcEEEEECCCCeeEEEEcCCCCccccccCCCcCccc---cCCcceEEEcCCCCEEEEECCC---CEEEEE
Q 011014 84 EPFSVAVSPSGELLVLDSENNSRPKLVAGSPEGYYGHVDGRPRGAR---MNHPKGLAVDDRGNIYIADTMN---MAIRKI 157 (495)
Q Consensus 84 ~P~GIAVd~dG~LyVaDs~n~~ii~ivaGs~~g~~G~~dG~~~~a~---f~~P~GIAVD~dGnIYVAD~~N---~rIrk~ 157 (495)
....++++++| ++++-..+. .+.++.-..........+. ... -.....|+++++|+++++-..+ +.|+.+
T Consensus 188 ~i~~~~~~~~~-~l~~~~~dg-~i~i~d~~~~~~~~~~~~~--~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~ 263 (397)
T 1sq9_A 188 FATSVDISERG-LIATGFNNG-TVQISELSTLRPLYNFESQ--HSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLY 263 (397)
T ss_dssp CCCEEEECTTS-EEEEECTTS-EEEEEETTTTEEEEEEECC--C---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEE
T ss_pred CceEEEECCCc-eEEEEeCCC-cEEEEECCCCceeEEEecc--ccccccCCccceEEECCCCCEEEEEecCCCCceEEEE
Confidence 46788999988 666665554 5555532210000000000 001 2245689999999977776666 899999
Q ss_pred cC-CC--cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCce
Q 011014 158 SD-TG--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDC 221 (495)
Q Consensus 158 d~-~G--V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~gN~rI~~~d~~g~~~ 221 (495)
|. ++ +.++.+..... .... ...+.-.....++ ..+++.++++-..++.|+.++.....+
T Consensus 264 d~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~v~~~~-~~~~~~~l~~~~~dg~i~iwd~~~~~~ 325 (397)
T 1sq9_A 264 ETEFGERIGSLSVPTHSS-QASL---GEFAHSSWVMSLS-FNDSGETLCSAGWDGKLRFWDVKTKER 325 (397)
T ss_dssp ETTTCCEEEEECBC------------CCBSBSSCEEEEE-ECSSSSEEEEEETTSEEEEEETTTTEE
T ss_pred ECCCCcccceeccCcccc-cccc---cccccCCcEEEEE-ECCCCCEEEEEeCCCeEEEEEcCCCce
Confidence 94 44 44443310000 0000 0000111234555 456666666666778888888876554
No 151
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=92.28 E-value=7.1 Score=38.59 Aligned_cols=147 Identities=14% Similarity=0.073 Sum_probs=82.1
Q ss_pred ceEEEEcCCCcEEEEECCCCeeEEEEcCCCCccccccCCCcCccccCCcceEEEcCCCCEEEEECCCCEEEEEcC-CC--
Q 011014 85 PFSVAVSPSGELLVLDSENNSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMNMAIRKISD-TG-- 161 (495)
Q Consensus 85 P~GIAVd~dG~LyVaDs~n~~ii~ivaGs~~g~~G~~dG~~~~a~f~~P~GIAVD~dGnIYVAD~~N~rIrk~d~-~G-- 161 (495)
-..|+++++|+++++-.... .+++..-..........+ .-..-..|++.++|+.+++=...+.|+.+|. .+
T Consensus 126 v~~v~~s~dg~~l~s~~~d~-~i~iwd~~~~~~~~~~~~-----h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~ 199 (393)
T 1erj_A 126 IRSVCFSPDGKFLATGAEDR-LIRIWDIENRKIVMILQG-----HEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQC 199 (393)
T ss_dssp EEEEEECTTSSEEEEEETTS-CEEEEETTTTEEEEEECC-----CSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEE
T ss_pred EEEEEECCCCCEEEEEcCCC-eEEEEECCCCcEEEEEcc-----CCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCee
Confidence 45789999998777665544 455543211000000011 1123458999999998888778899999994 44
Q ss_pred cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCceee-C--------CCCCCcce
Q 011014 162 VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCSD-N--------YDDTFHLG 232 (495)
Q Consensus 162 V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~gN~rI~~~d~~g~~~~~-~--------~~~g~P~G 232 (495)
+.++... .....+++...++.++++-...+.|+.++.....+.. . ...+.-..
T Consensus 200 ~~~~~~~------------------~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~ 261 (393)
T 1erj_A 200 SLTLSIE------------------DGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYS 261 (393)
T ss_dssp EEEEECS------------------SCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEE
T ss_pred EEEEEcC------------------CCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEE
Confidence 2333110 0123445333367777776677888888877655432 1 11122345
Q ss_pred EEEEecCcCeEEEEEccCCceEEEee
Q 011014 233 IFVLVAAAFFGYMLALLQRRVQAMFS 258 (495)
Q Consensus 233 IAvd~~a~~~~yv~d~~~~Rv~~~~~ 258 (495)
+++.. .+...++....+.| +++.
T Consensus 262 v~~~~--~g~~l~s~s~d~~v-~~wd 284 (393)
T 1erj_A 262 VVFTR--DGQSVVSGSLDRSV-KLWN 284 (393)
T ss_dssp EEECT--TSSEEEEEETTSEE-EEEE
T ss_pred EEECC--CCCEEEEEeCCCEE-EEEE
Confidence 66654 34445566666666 3443
No 152
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=92.19 E-value=0.99 Score=43.68 Aligned_cols=100 Identities=16% Similarity=0.234 Sum_probs=62.9
Q ss_pred cCCcceEEEcCCCCEEEEECCCCEEEEEcC-C-------CcEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeE
Q 011014 130 MNHPKGLAVDDRGNIYIADTMNMAIRKISD-T-------GVTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSL 201 (495)
Q Consensus 130 f~~P~GIAVD~dGnIYVAD~~N~rIrk~d~-~-------GV~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~L 201 (495)
+.+-..||++++|.||++ .+..+.++++ + +..+..|.. | .+. .+-+++|.+|.|
T Consensus 40 w~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~-----G----------w~~-F~a~~fD~~G~L 101 (236)
T 1tl2_A 40 WSNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNG-----G----------WNQ-FQFLFFDPNGYL 101 (236)
T ss_dssp CTTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECS-----C----------GGG-CSEEEECTTSCE
T ss_pred cccceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEeccc-----c----------ccc-ceEEEECCCCCE
Confidence 556679999999999999 5778999995 3 222222210 0 001 233558999999
Q ss_pred EEEECCCCeEEEEECCCCceee-------CCCCCCc--ceEEEEecCcCeEEEEEccCCce
Q 011014 202 LVIDRGNQAIREIQLHDDDCSD-------NYDDTFH--LGIFVLVAAAFFGYMLALLQRRV 253 (495)
Q Consensus 202 yVaD~gN~rI~~~d~~g~~~~~-------~~~~g~P--~GIAvd~~a~~~~yv~d~~~~Rv 253 (495)
|++ .+.+|+++++..+.+.+ ....|.. .-|+++ ..++||.+. ..++
T Consensus 102 Yav--~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~--p~G~Lyav~--dg~l 156 (236)
T 1tl2_A 102 YAV--SKDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFH--PNGYLYAVH--GQQF 156 (236)
T ss_dssp EEE--ETTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEEC--TTSCEEEEE--TTEE
T ss_pred EEe--CCCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEEC--CCceEEEEe--CCcE
Confidence 999 45899999984433221 2222322 334444 478899887 4444
No 153
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=91.99 E-value=9.9 Score=37.24 Aligned_cols=150 Identities=11% Similarity=0.009 Sum_probs=84.3
Q ss_pred CceEEEEcCCC-cEEEEECCCCeeEEEEcCCCCccccccCCCcCccccCCcceEEEcCCCCEEEEECCCCEEEEEcC-CC
Q 011014 84 EPFSVAVSPSG-ELLVLDSENNSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMNMAIRKISD-TG 161 (495)
Q Consensus 84 ~P~GIAVd~dG-~LyVaDs~n~~ii~ivaGs~~g~~G~~dG~~~~a~f~~P~GIAVD~dGnIYVAD~~N~rIrk~d~-~G 161 (495)
....|++.++| +++++-.... .+++..-........... ...-.....|+++++|+++++=..++.|+++|. .+
T Consensus 133 ~v~~~~~~p~~~~~l~s~~~dg-~i~iwd~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~ 208 (402)
T 2aq5_A 133 RVGIVAWHPTAQNVLLSAGCDN-VILVWDVGTGAAVLTLGP---DVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKG 208 (402)
T ss_dssp CEEEEEECSSBTTEEEEEETTS-CEEEEETTTTEEEEEECT---TTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTT
T ss_pred eEEEEEECcCCCCEEEEEcCCC-EEEEEECCCCCccEEEec---CCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCC
Confidence 45778888887 5666544443 344443211000000000 001123468999999987777667899999994 44
Q ss_pred --cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEE---CCCCeEEEEECCCCce---e-eCCCCCCcce
Q 011014 162 --VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVID---RGNQAIREIQLHDDDC---S-DNYDDTFHLG 232 (495)
Q Consensus 162 --V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD---~gN~rI~~~d~~g~~~---~-~~~~~g~P~G 232 (495)
+.++..+..+ ..+..++ ...++.++++- ..++.|+.+++..... . .....+....
T Consensus 209 ~~~~~~~~~~~~---------------~~~~~~~-~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~ 272 (402)
T 2aq5_A 209 TVVAEKDRPHEG---------------TRPVHAV-FVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLL 272 (402)
T ss_dssp EEEEEEECSSCS---------------SSCCEEE-ECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEE
T ss_pred ceeeeeccCCCC---------------CcceEEE-EcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeE
Confidence 3333111100 1245566 46678877776 6788999999877432 1 1223334566
Q ss_pred EEEEecCcCeEEEEEccCCceE
Q 011014 233 IFVLVAAAFFGYMLALLQRRVQ 254 (495)
Q Consensus 233 IAvd~~a~~~~yv~d~~~~Rv~ 254 (495)
++++.. +..++++......|.
T Consensus 273 ~~~s~~-~~~l~~~g~~dg~i~ 293 (402)
T 2aq5_A 273 PFFDPD-TNIVYLCGKGDSSIR 293 (402)
T ss_dssp EEEETT-TTEEEEEETTCSCEE
T ss_pred EEEcCC-CCEEEEEEcCCCeEE
Confidence 777752 345666776667773
No 154
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=91.29 E-value=5.9 Score=38.95 Aligned_cols=147 Identities=10% Similarity=0.015 Sum_probs=75.6
Q ss_pred ceEEEEcCCCcEEEEECCCCeeEEEEcCCCCccccccCCCcCccccCCcceEEEcCCC-CEEEEECCCCEEEEEcC-CC-
Q 011014 85 PFSVAVSPSGELLVLDSENNSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRG-NIYIADTMNMAIRKISD-TG- 161 (495)
Q Consensus 85 P~GIAVd~dG~LyVaDs~n~~ii~ivaGs~~g~~G~~dG~~~~a~f~~P~GIAVD~dG-nIYVAD~~N~rIrk~d~-~G- 161 (495)
-..|++.++|+++++-+... .+++..-..........+ .-..-..+++.+++ .++++=...+.|+.+|. .+
T Consensus 130 V~~v~~spdg~~l~sgs~d~-~i~iwd~~~~~~~~~~~~-----h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~ 203 (344)
T 4gqb_B 130 VSTVSVLSSGTQAVSGSKDI-CIKVWDLAQQVVLSSYRA-----HAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPK 203 (344)
T ss_dssp EEEEEECTTSSEEEEEETTS-CEEEEETTTTEEEEEECC-----CSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSS
T ss_pred EEEEEECCCCCEEEEEeCCC-eEEEEECCCCcEEEEEcC-----cCCceEEEEecCCCCCceeeeccccccccccccccc
Confidence 46788999998777765554 445543211000000011 11233578888877 47777777889999984 33
Q ss_pred -cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCceee-C-CCCCCcceEEEEec
Q 011014 162 -VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCSD-N-YDDTFHLGIFVLVA 238 (495)
Q Consensus 162 -V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~gN~rI~~~d~~g~~~~~-~-~~~g~P~GIAvd~~ 238 (495)
+.++..... -.....+++...++.++++-..++.|+.+|.....+.. . ...+.-..|++...
T Consensus 204 ~~~~~~~~~~---------------~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~ 268 (344)
T 4gqb_B 204 PASQIGCSAP---------------GYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPH 268 (344)
T ss_dssp CEEECC-------------------CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSSCEEEEEECSS
T ss_pred eeeeeeccee---------------eccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCCCEEEEEEccC
Confidence 333311100 11234556444466777776677888888877654432 1 11222244555431
Q ss_pred CcCeEEEEEccCCce
Q 011014 239 AAFFGYMLALLQRRV 253 (495)
Q Consensus 239 a~~~~yv~d~~~~Rv 253 (495)
+..+.++....+.|
T Consensus 269 -g~~~lasgs~D~~i 282 (344)
T 4gqb_B 269 -SVPFLASLSEDCSL 282 (344)
T ss_dssp -SSCCEEEEETTSCE
T ss_pred -CCeEEEEEeCCCeE
Confidence 12333444555555
No 155
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=91.24 E-value=5.7 Score=39.69 Aligned_cols=148 Identities=14% Similarity=0.122 Sum_probs=82.6
Q ss_pred CceEEEEcCCCcEEEEECCCCeeEEEEcCCCCccccccCCCcCccccCCcceEEEcCCCCEEEEECCCCEEEEEcCCC--
Q 011014 84 EPFSVAVSPSGELLVLDSENNSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMNMAIRKISDTG-- 161 (495)
Q Consensus 84 ~P~GIAVd~dG~LyVaDs~n~~ii~ivaGs~~g~~G~~dG~~~~a~f~~P~GIAVD~dGnIYVAD~~N~rIrk~d~~G-- 161 (495)
....|++++++.++++-+... .+++..-..........+ .-..-..|+++++|+++++=...+.|+.+|..+
T Consensus 110 ~V~~~~~~p~~~~l~s~s~Dg-~i~vwd~~~~~~~~~l~~-----h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~ 183 (410)
T 1vyh_C 110 PVTRVIFHPVFSVMVSASEDA-TIKVWDYETGDFERTLKG-----HTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFE 183 (410)
T ss_dssp CEEEEEECSSSSEEEEEESSS-CEEEEETTTCCCCEEECC-----CSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSC
T ss_pred cEEEEEEcCCCCEEEEEeCCC-eEEEEECCCCcEEEEEec-----cCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCc
Confidence 456888999998887766555 455543211000000001 112345899999999888877888999998554
Q ss_pred -cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCceee--CCCCCCcceEEEEec
Q 011014 162 -VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCSD--NYDDTFHLGIFVLVA 238 (495)
Q Consensus 162 -V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~gN~rI~~~d~~g~~~~~--~~~~g~P~GIAvd~~ 238 (495)
+.++.+- -..-..++ ..+++..+++-...+.|+.++.....+.. ......-..++...
T Consensus 184 ~~~~~~~h-----------------~~~V~~v~-~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~- 244 (410)
T 1vyh_C 184 CIRTMHGH-----------------DHNVSSVS-IMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQ- 244 (410)
T ss_dssp EEECCCCC-----------------SSCEEEEE-ECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECT-
T ss_pred eeEEEcCC-----------------CCCEEEEE-EeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECC-
Confidence 2333111 01223455 45666666666667888888887665532 12222223344433
Q ss_pred CcCeEEEEEccCCceEEEee
Q 011014 239 AAFFGYMLALLQRRVQAMFS 258 (495)
Q Consensus 239 a~~~~yv~d~~~~Rv~~~~~ 258 (495)
.+...++....+.| +++.
T Consensus 245 -~g~~l~s~s~D~~v-~vwd 262 (410)
T 1vyh_C 245 -DGTLIASCSNDQTV-RVWV 262 (410)
T ss_dssp -TSSEEEEEETTSCE-EEEE
T ss_pred -CCCEEEEEcCCCeE-EEEE
Confidence 34455566555556 3443
No 156
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=90.62 E-value=12 Score=37.14 Aligned_cols=114 Identities=18% Similarity=0.183 Sum_probs=67.0
Q ss_pred CceEEEEcCCCcEEEEECCCCeeEEEEcCCCCccccccCCCcCccccCCcceEEEcCCCCEEEEECCCCEEEEEc-CCC-
Q 011014 84 EPFSVAVSPSGELLVLDSENNSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMNMAIRKIS-DTG- 161 (495)
Q Consensus 84 ~P~GIAVd~dG~LyVaDs~n~~ii~ivaGs~~g~~G~~dG~~~~a~f~~P~GIAVD~dGnIYVAD~~N~rIrk~d-~~G- 161 (495)
.-..|+++++|+++++-+... .+++..-..........+ .-..-..|++.++|+.+++=...+.|+.+| ..|
T Consensus 152 ~V~~v~~~~~~~~l~sgs~D~-~i~iwd~~~~~~~~~~~~-----h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~ 225 (410)
T 1vyh_C 152 SVQDISFDHSGKLLASCSADM-TIKLWDFQGFECIRTMHG-----HDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGY 225 (410)
T ss_dssp CEEEEEECTTSSEEEEEETTS-CCCEEETTSSCEEECCCC-----CSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCC
T ss_pred cEEEEEEcCCCCEEEEEeCCC-eEEEEeCCCCceeEEEcC-----CCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCc
Confidence 357888999888777765544 344442111000000011 112345899999999888877889999999 344
Q ss_pred -cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCce
Q 011014 162 -VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDC 221 (495)
Q Consensus 162 -V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~gN~rI~~~d~~g~~~ 221 (495)
+.++.+... .-..++ ...++.++++-...+.|+.++.....+
T Consensus 226 ~~~~~~~h~~-----------------~v~~~~-~~~~g~~l~s~s~D~~v~vwd~~~~~~ 268 (410)
T 1vyh_C 226 CVKTFTGHRE-----------------WVRMVR-PNQDGTLIASCSNDQTVRVWVVATKEC 268 (410)
T ss_dssp EEEEEECCSS-----------------CEEEEE-ECTTSSEEEEEETTSCEEEEETTTCCE
T ss_pred EEEEEeCCCc-----------------cEEEEE-ECCCCCEEEEEcCCCeEEEEECCCCce
Confidence 555533110 112344 456677766666677777777766554
No 157
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=90.32 E-value=9.7 Score=37.08 Aligned_cols=166 Identities=14% Similarity=0.060 Sum_probs=83.7
Q ss_pred CCceEEEEcCCCcEEEEECCCCeeEEEEcCCCCccccccCCCcCccccCCcceEEEcCCCCEEEEECCCCEEEEEcC-CC
Q 011014 83 MEPFSVAVSPSGELLVLDSENNSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMNMAIRKISD-TG 161 (495)
Q Consensus 83 ~~P~GIAVd~dG~LyVaDs~n~~ii~ivaGs~~g~~G~~dG~~~~a~f~~P~GIAVD~dGnIYVAD~~N~rIrk~d~-~G 161 (495)
.....|+++++|+++++-..+. .+++..-.......... ..-.....|+++++|+++++=...+.|+.+|. .+
T Consensus 140 ~~v~~~~~~~~~~~l~s~s~d~-~i~iwd~~~~~~~~~~~-----~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~ 213 (420)
T 3vl1_A 140 SEITKLKFFPSGEALISSSQDM-QLKIWSVKDGSNPRTLI-----GHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTG 213 (420)
T ss_dssp SCEEEEEECTTSSEEEEEETTS-EEEEEETTTCCCCEEEE-----CCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTT
T ss_pred CccEEEEECCCCCEEEEEeCCC-eEEEEeCCCCcCceEEc-----CCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCC
Confidence 3467889999988776665554 45554321100000000 01123458999999997777777888999994 34
Q ss_pred --cEEEecCcccCCCC-----CCCC--CCcCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCceeeC--C-CCCC
Q 011014 162 --VTTIAGGKWSRGVG-----HVDG--PSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCSDN--Y-DDTF 229 (495)
Q Consensus 162 --V~tiaGg~~G~~~g-----~~dG--~~~~a~f~~P~gVa~vd~~G~LyVaD~gN~rI~~~d~~g~~~~~~--~-~~g~ 229 (495)
+.++.+.......- ..++ ......-.....++ ..+++.++++-..++.|+.+++........ . ..+.
T Consensus 214 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~ 292 (420)
T 3vl1_A 214 TTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLE-FGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCS 292 (420)
T ss_dssp EEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTC-SSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSC
T ss_pred ceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceE-EcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccCCC
Confidence 44443211000000 0000 00000011222334 356676666666677888888776554321 1 2223
Q ss_pred cceEEEEecCcCe-EEEEEccCCceEEEee
Q 011014 230 HLGIFVLVAAAFF-GYMLALLQRRVQAMFS 258 (495)
Q Consensus 230 P~GIAvd~~a~~~-~yv~d~~~~Rv~~~~~ 258 (495)
...+++.. .+. ..++......| .++.
T Consensus 293 v~~~~~~~--~~~~~l~~g~~dg~i-~vwd 319 (420)
T 3vl1_A 293 CNSLTVDG--NNANYIYAGYENGML-AQWD 319 (420)
T ss_dssp EEEEEECS--SCTTEEEEEETTSEE-EEEE
T ss_pred ceeEEEeC--CCCCEEEEEeCCCeE-EEEE
Confidence 45666664 222 45555555666 3443
No 158
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=90.30 E-value=12 Score=35.07 Aligned_cols=144 Identities=17% Similarity=0.099 Sum_probs=78.4
Q ss_pred CceEEEEcCCCcEEEEECCCCeeEEEEcCCCCccccccCCCcCccccCCcceEEEcCCCCEEEEECCCCEEEEEcCC-C-
Q 011014 84 EPFSVAVSPSGELLVLDSENNSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMNMAIRKISDT-G- 161 (495)
Q Consensus 84 ~P~GIAVd~dG~LyVaDs~n~~ii~ivaGs~~g~~G~~dG~~~~a~f~~P~GIAVD~dGnIYVAD~~N~rIrk~d~~-G- 161 (495)
.-..++++++|+++++-..+. .+++..-..........+ .-..-..++++++++++++=..++.|+.+|.. +
T Consensus 67 ~v~~~~~~~~~~~l~s~~~d~-~i~vwd~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~ 140 (312)
T 4ery_A 67 GISDVAWSSDSNLLVSASDDK-TLKIWDVSSGKCLKTLKG-----HSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGK 140 (312)
T ss_dssp CEEEEEECTTSSEEEEEETTS-EEEEEETTTCCEEEEEEC-----CSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCC
T ss_pred ceEEEEEcCCCCEEEEECCCC-EEEEEECCCCcEEEEEcC-----CCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCE
Confidence 457889999998777765554 455543211000000000 11223578899999988887778899999943 4
Q ss_pred -cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCceee--CCCCCC-cceEEEEe
Q 011014 162 -VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCSD--NYDDTF-HLGIFVLV 237 (495)
Q Consensus 162 -V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~gN~rI~~~d~~g~~~~~--~~~~g~-P~GIAvd~ 237 (495)
+.++.+.. ..-..++ ..+++.++++-...+.|+.+++....+.. ...... -..+++..
T Consensus 141 ~~~~~~~~~-----------------~~v~~~~-~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (312)
T 4ery_A 141 CLKTLPAHS-----------------DPVSAVH-FNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSP 202 (312)
T ss_dssp EEEEECCCS-----------------SCEEEEE-ECTTSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECT
T ss_pred EEEEecCCC-----------------CcEEEEE-EcCCCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECC
Confidence 34442110 0123445 46666666666667788888887655432 111111 23345543
Q ss_pred cCcCeEEEEEccCCce
Q 011014 238 AAAFFGYMLALLQRRV 253 (495)
Q Consensus 238 ~a~~~~yv~d~~~~Rv 253 (495)
.+...++......|
T Consensus 203 --~~~~l~~~~~d~~i 216 (312)
T 4ery_A 203 --NGKYILAATLDNTL 216 (312)
T ss_dssp --TSSEEEEEETTTEE
T ss_pred --CCCEEEEEcCCCeE
Confidence 33334444555555
No 159
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=90.24 E-value=8.4 Score=37.06 Aligned_cols=112 Identities=9% Similarity=0.006 Sum_probs=64.7
Q ss_pred CceEEEEcCCCcEEEEECCCCeeEEEEcCCCCccccccCCCcCccccCCcceEEEcCCCCEEEEECCCCEEEEEcC-CC-
Q 011014 84 EPFSVAVSPSGELLVLDSENNSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMNMAIRKISD-TG- 161 (495)
Q Consensus 84 ~P~GIAVd~dG~LyVaDs~n~~ii~ivaGs~~g~~G~~dG~~~~a~f~~P~GIAVD~dGnIYVAD~~N~rIrk~d~-~G- 161 (495)
....++++++|+++++-..+. .+.++.-.......... ..-.....+++.++| ++++-..++.|+.++. .+
T Consensus 249 ~i~~~~~~~~~~~l~~~~~d~-~i~i~d~~~~~~~~~~~-----~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~ 321 (425)
T 1r5m_A 249 PISVLEFNDTNKLLLSASDDG-TLRIWHGGNGNSQNCFY-----GHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNT 321 (425)
T ss_dssp CEEEEEEETTTTEEEEEETTS-CEEEECSSSBSCSEEEC-----CCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTE
T ss_pred ceEEEEECCCCCEEEEEcCCC-EEEEEECCCCccceEec-----CCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCc
Confidence 346788888887666554444 44554321100000000 011234689999998 7777677899999994 44
Q ss_pred -cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCc
Q 011014 162 -VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDD 220 (495)
Q Consensus 162 -V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~gN~rI~~~d~~g~~ 220 (495)
+.++.+.. .....++ ..+++.++++-..++.|+.++.....
T Consensus 322 ~~~~~~~~~-----------------~~i~~~~-~s~~~~~l~~~~~dg~i~i~~~~~~~ 363 (425)
T 1r5m_A 322 LLALSIVDG-----------------VPIFAGR-ISQDGQKYAVAFMDGQVNVYDLKKLN 363 (425)
T ss_dssp EEEEEECTT-----------------CCEEEEE-ECTTSSEEEEEETTSCEEEEECHHHH
T ss_pred EeEecccCC-----------------ccEEEEE-EcCCCCEEEEEECCCeEEEEECCCCc
Confidence 33332210 1234555 56677777666677889988887644
No 160
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=90.07 E-value=8.3 Score=36.60 Aligned_cols=145 Identities=8% Similarity=-0.048 Sum_probs=78.3
Q ss_pred ceEEEEcCCCcEEEEECCCCeeEEEEcCCCCc--cccccCCCcCccccCCcceEEEcCCCCEEEEECCCCEEEEEcC-CC
Q 011014 85 PFSVAVSPSGELLVLDSENNSRPKLVAGSPEG--YYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMNMAIRKISD-TG 161 (495)
Q Consensus 85 P~GIAVd~dG~LyVaDs~n~~ii~ivaGs~~g--~~G~~dG~~~~a~f~~P~GIAVD~dGnIYVAD~~N~rIrk~d~-~G 161 (495)
-..++++++|+++++-..++ .+++..-.... ......+ .-.....|+++++|+++++=..++.|+.++. .+
T Consensus 11 i~~~~~s~~~~~l~~~~~d~-~v~i~~~~~~~~~~~~~~~~-----h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~ 84 (372)
T 1k8k_C 11 ISCHAWNKDRTQIAICPNNH-EVHIYEKSGNKWVQVHELKE-----HNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGR 84 (372)
T ss_dssp CCEEEECTTSSEEEEECSSS-EEEEEEEETTEEEEEEEEEC-----CSSCEEEEEEETTTTEEEEEETTSCEEEEEEETT
T ss_pred eEEEEECCCCCEEEEEeCCC-EEEEEeCCCCcEEeeeeecC-----CCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCC
Confidence 46788888888777665554 44444211100 0000001 1123568999999997777667788998884 33
Q ss_pred --cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCc----eee--CCCCCCcceE
Q 011014 162 --VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDD----CSD--NYDDTFHLGI 233 (495)
Q Consensus 162 --V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~gN~rI~~~d~~g~~----~~~--~~~~g~P~GI 233 (495)
...+.-.. .-.....++ ...++.++++-..++.|+.++.+... +.. ....+....+
T Consensus 85 ~~~~~~~~~~---------------~~~~v~~~~-~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~ 148 (372)
T 1k8k_C 85 TWKPTLVILR---------------INRAARCVR-WAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSL 148 (372)
T ss_dssp EEEEEEECCC---------------CSSCEEEEE-ECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEE
T ss_pred eeeeeEEeec---------------CCCceeEEE-ECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEE
Confidence 22221100 011244566 45566655555566778877766644 221 2223345667
Q ss_pred EEEecCcCeEEEEEccCCce
Q 011014 234 FVLVAAAFFGYMLALLQRRV 253 (495)
Q Consensus 234 Avd~~a~~~~yv~d~~~~Rv 253 (495)
++.. .....++......|
T Consensus 149 ~~~~--~~~~l~~~~~dg~i 166 (372)
T 1k8k_C 149 DWHP--NSVLLAAGSCDFKC 166 (372)
T ss_dssp EECT--TSSEEEEEETTSCE
T ss_pred EEcC--CCCEEEEEcCCCCE
Confidence 7665 34455566666666
No 161
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=89.72 E-value=12 Score=35.95 Aligned_cols=72 Identities=13% Similarity=0.068 Sum_probs=43.4
Q ss_pred CcceEEEcCCCCEEEEECCCCEEEEEcCCC--cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECCCC
Q 011014 132 HPKGLAVDDRGNIYIADTMNMAIRKISDTG--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQ 209 (495)
Q Consensus 132 ~P~GIAVD~dGnIYVAD~~N~rIrk~d~~G--V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~gN~ 209 (495)
....|+++++|+++++=..++.|+.++.++ +..+.+.. ....+++ ..+++..+++-..++
T Consensus 110 ~v~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~-----------------~~v~~~~-~~~~~~~l~~~~~d~ 171 (425)
T 1r5m_A 110 QVTCLAWSHDGNSIVTGVENGELRLWNKTGALLNVLNFHR-----------------APIVSVK-WNKDGTHIISMDVEN 171 (425)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTSCEEEEECCCC-----------------SCEEEEE-ECTTSSEEEEEETTC
T ss_pred ceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeeccCCC-----------------ccEEEEE-ECCCCCEEEEEecCC
Confidence 456899999999777766788999999766 44442210 1223444 344454444434456
Q ss_pred eEEEEECCCCce
Q 011014 210 AIREIQLHDDDC 221 (495)
Q Consensus 210 rI~~~d~~g~~~ 221 (495)
.|+.++.....+
T Consensus 172 ~i~iwd~~~~~~ 183 (425)
T 1r5m_A 172 VTILWNVISGTV 183 (425)
T ss_dssp CEEEEETTTTEE
T ss_pred eEEEEECCCCcE
Confidence 677777655443
No 162
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=89.62 E-value=13 Score=35.09 Aligned_cols=149 Identities=11% Similarity=0.075 Sum_probs=84.0
Q ss_pred CceEEEEcCCCcEEEEECCCCeeEEEEcCCCCccccccCCCcCccccCCcceEEEcCCCCEEEEECCCCEEEEEcC-CC-
Q 011014 84 EPFSVAVSPSGELLVLDSENNSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMNMAIRKISD-TG- 161 (495)
Q Consensus 84 ~P~GIAVd~dG~LyVaDs~n~~ii~ivaGs~~g~~G~~dG~~~~a~f~~P~GIAVD~dGnIYVAD~~N~rIrk~d~-~G- 161 (495)
.-.+|+++|+|.++++-.... .+++..-..........+ .-..-..+++.++|+++++=...+.|+.++. .|
T Consensus 15 ~V~~~~fsp~~~~l~s~~~dg-~v~lWd~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~ 88 (304)
T 2ynn_A 15 RVKGIDFHPTEPWVLTTLYSG-RVELWNYETQVEVRSIQV-----TETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGE 88 (304)
T ss_dssp CEEEEEECSSSSEEEEEETTS-EEEEEETTTTEEEEEEEC-----CSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCC
T ss_pred ceEEEEECCCCCEEEEEcCCC-cEEEEECCCCceeEEeec-----cCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCCc
Confidence 456888999988777665544 455543221000000000 0012247888889998888778899999994 44
Q ss_pred -cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCcee--e-CCCCCCcceEEEEe
Q 011014 162 -VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCS--D-NYDDTFHLGIFVLV 237 (495)
Q Consensus 162 -V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~gN~rI~~~d~~g~~~~--~-~~~~g~P~GIAvd~ 237 (495)
+.++.+-. ..-..|+ ..+++.++++-...+.|+.++....... . ....+.-..+++..
T Consensus 89 ~~~~~~~h~-----------------~~v~~~~-~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p 150 (304)
T 2ynn_A 89 KVVDFEAHP-----------------DYIRSIA-VHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNP 150 (304)
T ss_dssp EEEEEECCS-----------------SCEEEEE-ECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECT
T ss_pred EEEEEeCCC-----------------CcEEEEE-EcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECC
Confidence 44443211 1224556 5667777777777788888887765322 1 22223335566553
Q ss_pred cCcCeEEEEEccCCceEEEee
Q 011014 238 AAAFFGYMLALLQRRVQAMFS 258 (495)
Q Consensus 238 ~a~~~~yv~d~~~~Rv~~~~~ 258 (495)
. .....++....+.| +++.
T Consensus 151 ~-~~~~l~sgs~D~~v-~iwd 169 (304)
T 2ynn_A 151 K-DPSTFASGCLDRTV-KVWS 169 (304)
T ss_dssp T-CTTEEEEEETTSEE-EEEE
T ss_pred C-CCCEEEEEeCCCeE-EEEE
Confidence 1 23455666666666 4554
No 163
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=89.40 E-value=11 Score=36.27 Aligned_cols=149 Identities=11% Similarity=-0.037 Sum_probs=79.9
Q ss_pred CceEEEEcCCC-cEEEEECCCCeeEEEEcCC-CCccccccCCCcCccccCCcceEEEcC-CCCEEEEECCCCEEEEEcCC
Q 011014 84 EPFSVAVSPSG-ELLVLDSENNSRPKLVAGS-PEGYYGHVDGRPRGARMNHPKGLAVDD-RGNIYIADTMNMAIRKISDT 160 (495)
Q Consensus 84 ~P~GIAVd~dG-~LyVaDs~n~~ii~ivaGs-~~g~~G~~dG~~~~a~f~~P~GIAVD~-dGnIYVAD~~N~rIrk~d~~ 160 (495)
.-..|+++++| +++++-..+. .+++..-. .....-. .. ...-..-.+|++.+ +++++++=..++.|+.++..
T Consensus 75 ~v~~~~~~~~~~~~l~s~~~dg-~i~iwd~~~~~~~~~~-~~---~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~ 149 (383)
T 3ei3_B 75 RVTSLEWHPTHPTTVAVGSKGG-DIILWDYDVQNKTSFI-QG---MGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFS 149 (383)
T ss_dssp CEEEEEECSSCTTEEEEEEBTS-CEEEEETTSTTCEEEE-CC---CSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETT
T ss_pred CEEEEEECCCCCCEEEEEcCCC-eEEEEeCCCcccceee-ec---CCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECC
Confidence 45678888887 6666554444 34444321 1000000 00 00112345889988 66776666678899999966
Q ss_pred C--cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCceeeCC-CCCCcceEEEEe
Q 011014 161 G--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCSDNY-DDTFHLGIFVLV 237 (495)
Q Consensus 161 G--V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~gN~rI~~~d~~g~~~~~~~-~~g~P~GIAvd~ 237 (495)
+ +..+.+... .-.....++ ..+++.++++-..++.|+.+++.+..+.... ..+.-..+++..
T Consensus 150 ~~~~~~~~~~~~--------------~~~~v~~~~-~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~h~~~v~~~~~~~ 214 (383)
T 3ei3_B 150 GSVIQVFAKTDS--------------WDYWYCCVD-VSVSRQMLATGDSTGRLLLLGLDGHEIFKEKLHKAKVTHAEFNP 214 (383)
T ss_dssp SCEEEEEECCCC--------------SSCCEEEEE-EETTTTEEEEEETTSEEEEEETTSCEEEEEECSSSCEEEEEECS
T ss_pred CCceEEEeccCC--------------CCCCeEEEE-ECCCCCEEEEECCCCCEEEEECCCCEEEEeccCCCcEEEEEECC
Confidence 5 444432110 001234555 3455666666556788888888765554322 233446666665
Q ss_pred cCcCeEEEEEccCCce
Q 011014 238 AAAFFGYMLALLQRRV 253 (495)
Q Consensus 238 ~a~~~~yv~d~~~~Rv 253 (495)
. +..+.++....+.|
T Consensus 215 ~-~~~~l~s~~~d~~i 229 (383)
T 3ei3_B 215 R-CDWLMATSSVDATV 229 (383)
T ss_dssp S-CTTEEEEEETTSEE
T ss_pred C-CCCEEEEEeCCCEE
Confidence 2 12255666666666
No 164
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=89.15 E-value=15 Score=34.49 Aligned_cols=143 Identities=7% Similarity=-0.024 Sum_probs=76.3
Q ss_pred CceEEEEcCCCcEEEEECCCCeeEEEEcCCC-CccccccCCCcCccccCCcceEEEcCCCCEEEEECCCCEEEEEcCC-C
Q 011014 84 EPFSVAVSPSGELLVLDSENNSRPKLVAGSP-EGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMNMAIRKISDT-G 161 (495)
Q Consensus 84 ~P~GIAVd~dG~LyVaDs~n~~ii~ivaGs~-~g~~G~~dG~~~~a~f~~P~GIAVD~dGnIYVAD~~N~rIrk~d~~-G 161 (495)
....++++++|+++++-..+. .+.++.-.. ........+ .-....+++++++|+++++=..++.|+.+|.. +
T Consensus 177 ~~~~~~~~~~~~~l~~~~~dg-~i~i~d~~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~ 250 (369)
T 3zwl_B 177 AATVAGWSTKGKYIIAGHKDG-KISKYDVSNNYEYVDSIDL-----HEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTL 250 (369)
T ss_dssp CEEEEEECGGGCEEEEEETTS-EEEEEETTTTTEEEEEEEC-----CSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC
T ss_pred ceeEEEEcCCCCEEEEEcCCC-EEEEEECCCCcEeEEEEec-----CCCceeEEEECCCCCEEEEecCCceEEEEECCCC
Confidence 567888888887666554444 445543221 011000000 11245689999999977777778899999943 3
Q ss_pred --cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECCCC--------------eEEEEECCCCceee--
Q 011014 162 --VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQ--------------AIREIQLHDDDCSD-- 223 (495)
Q Consensus 162 --V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~gN~--------------rI~~~d~~g~~~~~-- 223 (495)
+..+... .....++ ..+++..+++-...+ .|+.++.....+..
T Consensus 251 ~~~~~~~~~------------------~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~ 311 (369)
T 3zwl_B 251 QVLKKYETD------------------CPLNTAV-ITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRV 311 (369)
T ss_dssp CEEEEEECS------------------SCEEEEE-ECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEE
T ss_pred ceeeeecCC------------------CCceeEE-ecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhhe
Confidence 3343211 0123344 344444333322222 67788776655432
Q ss_pred CCCCCCcceEEEEecCcCeEEEEEccCCce
Q 011014 224 NYDDTFHLGIFVLVAAAFFGYMLALLQRRV 253 (495)
Q Consensus 224 ~~~~g~P~GIAvd~~a~~~~yv~d~~~~Rv 253 (495)
....+.-..+++.. .+...++......|
T Consensus 312 ~~~~~~v~~~~~s~--~~~~l~s~~~dg~v 339 (369)
T 3zwl_B 312 QGHFGPLNTVAISP--QGTSYASGGEDGFI 339 (369)
T ss_dssp ECCSSCEEEEEECT--TSSEEEEEETTSEE
T ss_pred ecccCcEEEEEECC--CCCEEEEEcCCCeE
Confidence 22333445666654 34455666666666
No 165
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=88.60 E-value=6.2 Score=38.68 Aligned_cols=147 Identities=10% Similarity=-0.018 Sum_probs=75.6
Q ss_pred ceEEEEcCCCcEEEEECCCCeeEEEEcCCCCccccccCCCcCccccCCcceEEEcCCCC-EEEEECCCCEEEEEcCC-C-
Q 011014 85 PFSVAVSPSGELLVLDSENNSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGN-IYIADTMNMAIRKISDT-G- 161 (495)
Q Consensus 85 P~GIAVd~dG~LyVaDs~n~~ii~ivaGs~~g~~G~~dG~~~~a~f~~P~GIAVD~dGn-IYVAD~~N~rIrk~d~~-G- 161 (495)
-..|++.++|+++++-..+. .+++..-..........+ .-.....|++.+++. ++++-..++.|+.+|.. +
T Consensus 142 V~~v~~spdg~~l~sgs~dg-~v~iwd~~~~~~~~~~~~-----h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~ 215 (357)
T 4g56_B 142 VKTLSVFSDGTQAVSGGKDF-SVKVWDLSQKAVLKSYNA-----HSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPK 215 (357)
T ss_dssp EEEEEECSSSSEEEEEETTS-CEEEEETTTTEEEEEECC-----CSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSS
T ss_pred EEEEEECCCCCEEEEEeCCC-eEEEEECCCCcEEEEEcC-----CCCCEEEEEEccCCCceeeeeccCCceEEEECCCCc
Confidence 46789999998777655444 455543221000000011 112345788888764 77777778889998843 2
Q ss_pred -cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCcee-eC-CCCCCcceEEEEec
Q 011014 162 -VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCS-DN-YDDTFHLGIFVLVA 238 (495)
Q Consensus 162 -V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~gN~rI~~~d~~g~~~~-~~-~~~g~P~GIAvd~~ 238 (495)
+..+... ..-..+..|++.+.++.++++-..++.|+.+++....+. .. ...+.-..+++...
T Consensus 216 ~~~~~~~~---------------~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~ 280 (357)
T 4g56_B 216 PATRIDFC---------------ASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYH 280 (357)
T ss_dssp CBCBCCCT---------------TCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSCEEEEEECSS
T ss_pred eeeeeeec---------------cccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEeccceeEEEEEEcCC
Confidence 2211110 001134556643445666666556778888887765433 22 22222345555431
Q ss_pred CcCeEEEEEccCCce
Q 011014 239 AAFFGYMLALLQRRV 253 (495)
Q Consensus 239 a~~~~yv~d~~~~Rv 253 (495)
+..+.++....+.|
T Consensus 281 -~~~~lasgs~D~~i 294 (357)
T 4g56_B 281 -SSPFLASISEDCTV 294 (357)
T ss_dssp -SSCCEEEEETTSCE
T ss_pred -CCCEEEEEeCCCEE
Confidence 12233444444555
No 166
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=88.50 E-value=16 Score=34.18 Aligned_cols=110 Identities=17% Similarity=0.165 Sum_probs=62.4
Q ss_pred CceEEEEcCCCcEEEEECCCCeeEEEEcC-CCCccccccCCCcCccccCCcceEEEcCCCCEEEEECCCCEEEEEcC-CC
Q 011014 84 EPFSVAVSPSGELLVLDSENNSRPKLVAG-SPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMNMAIRKISD-TG 161 (495)
Q Consensus 84 ~P~GIAVd~dG~LyVaDs~n~~ii~ivaG-s~~g~~G~~dG~~~~a~f~~P~GIAVD~dGnIYVAD~~N~rIrk~d~-~G 161 (495)
.-..|+++++|+++++-..+. .+.+..- +.. ......+ .-..-..|+++++|+++++=..++.|+.++. ++
T Consensus 34 ~v~~~~~s~~~~~l~~~~~dg-~i~vwd~~~~~-~~~~~~~-----h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~ 106 (369)
T 3zwl_B 34 PLTQVKYNKEGDLLFSCSKDS-SASVWYSLNGE-RLGTLDG-----HTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNG 106 (369)
T ss_dssp CEEEEEECTTSCEEEEEESSS-CEEEEETTTCC-EEEEECC-----CSSCEEEEEECTTSSEEEEEETTTEEEEEETTTC
T ss_pred eEEEEEEcCCCCEEEEEeCCC-EEEEEeCCCch-hhhhhhh-----cCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCC
Confidence 456788888887666554443 3444431 110 0000000 1123458999999997777777899999994 34
Q ss_pred --cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECCC-----CeEEEEECCCC
Q 011014 162 --VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGN-----QAIREIQLHDD 219 (495)
Q Consensus 162 --V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~gN-----~rI~~~d~~g~ 219 (495)
+.++... .....++ ..+++..+++-..+ +.|+.++....
T Consensus 107 ~~~~~~~~~------------------~~v~~~~-~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~ 152 (369)
T 3zwl_B 107 QCVATWKSP------------------VPVKRVE-FSPCGNYFLAILDNVMKNPGSINIYEIERD 152 (369)
T ss_dssp CEEEEEECS------------------SCEEEEE-ECTTSSEEEEEECCBTTBCCEEEEEEEEEC
T ss_pred cEEEEeecC------------------CCeEEEE-EccCCCEEEEecCCccCCCCEEEEEEecCC
Confidence 3443210 1234555 45666665555555 77887776553
No 167
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=87.95 E-value=9 Score=37.45 Aligned_cols=145 Identities=10% Similarity=-0.039 Sum_probs=79.4
Q ss_pred ceEEEEcCCCcEEEEECCCCeeEEEEc---CCCCccccccCCCcCccccCCcceEEEcCCCCEEEEECCCCEEEEEcCC-
Q 011014 85 PFSVAVSPSGELLVLDSENNSRPKLVA---GSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMNMAIRKISDT- 160 (495)
Q Consensus 85 P~GIAVd~dG~LyVaDs~n~~ii~iva---Gs~~g~~G~~dG~~~~a~f~~P~GIAVD~dGnIYVAD~~N~rIrk~d~~- 160 (495)
-..|++.+++.++++...+. +++.. +........ . ....-..-..|++.++|+++++=..++.|+.+|..
T Consensus 97 V~~~~~s~d~~~l~~s~dg~--v~lWd~~~~~~~~~~~~-~---~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~ 170 (357)
T 4g56_B 97 VTDVAWVSEKGILVASDSGA--VELWEILEKESLLVNKF-A---KYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQ 170 (357)
T ss_dssp EEEEEEETTTEEEEEETTSC--EEEC--------CCCCE-E---ECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTT
T ss_pred EEEEEEcCCCCEEEEECCCE--EEEeeccccceeEEEee-c---cCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCC
Confidence 46788999998888765443 44432 211000000 0 00011234589999999988877778899999954
Q ss_pred C--cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCceeeC----CCCCCcceEE
Q 011014 161 G--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCSDN----YDDTFHLGIF 234 (495)
Q Consensus 161 G--V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~gN~rI~~~d~~g~~~~~~----~~~g~P~GIA 234 (495)
+ +.++.+. -.....|++......++++-..++.|+.+++....+... ...+.+..++
T Consensus 171 ~~~~~~~~~h-----------------~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~ 233 (357)
T 4g56_B 171 KAVLKSYNAH-----------------SSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVT 233 (357)
T ss_dssp TEEEEEECCC-----------------SSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEE
T ss_pred CcEEEEEcCC-----------------CCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchh
Confidence 4 3444221 012345553333335666666778898888776544321 1222355666
Q ss_pred EEecCcCeEEEEEccCCce
Q 011014 235 VLVAAAFFGYMLALLQRRV 253 (495)
Q Consensus 235 vd~~a~~~~yv~d~~~~Rv 253 (495)
+... +..+.++......|
T Consensus 234 ~sp~-~~~~la~g~~d~~i 251 (357)
T 4g56_B 234 WHPE-KDDTFACGDETGNV 251 (357)
T ss_dssp ECTT-STTEEEEEESSSCE
T ss_pred hhhc-ccceEEEeecccce
Confidence 6432 23455666666666
No 168
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=87.94 E-value=15 Score=35.93 Aligned_cols=149 Identities=7% Similarity=-0.057 Sum_probs=80.6
Q ss_pred ceEEEEcCCCcEEEEECCCCeeEEEEc---CCCCccccccCCCcCccccCCcceEEEcCCCCEEEEECCCCEEEEEcC-C
Q 011014 85 PFSVAVSPSGELLVLDSENNSRPKLVA---GSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMNMAIRKISD-T 160 (495)
Q Consensus 85 P~GIAVd~dG~LyVaDs~n~~ii~iva---Gs~~g~~G~~dG~~~~a~f~~P~GIAVD~dGnIYVAD~~N~rIrk~d~-~ 160 (495)
-.+|++.+++.|+++..++ .+++.. +......... ..+.-..-..|++.++|+++++=...+.|+.+|. .
T Consensus 85 v~~~~~s~d~~l~~~s~dg--~v~lWd~~~~~~~~~~~~~----~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~ 158 (344)
T 4gqb_B 85 VADLTWVGERGILVASDSG--AVELWELDENETLIVSKFC----KYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQ 158 (344)
T ss_dssp EEEEEEETTTEEEEEETTS--EEEEEEECTTSSCEEEEEE----EECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred EEEEEEeCCCeEEEEECCC--EEEEEeccCCCceeEeecc----ccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCC
Confidence 3578888888777665433 455542 2211110000 0000112358999999998888777889999994 4
Q ss_pred C--cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCceee-C---CCCCCcceEE
Q 011014 161 G--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCSD-N---YDDTFHLGIF 234 (495)
Q Consensus 161 G--V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~gN~rI~~~d~~g~~~~~-~---~~~g~P~GIA 234 (495)
+ +.++.|-. ..-..+++...+..++++-...+.|+.+|.....+.. . ........++
T Consensus 159 ~~~~~~~~~h~-----------------~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~ 221 (344)
T 4gqb_B 159 QVVLSSYRAHA-----------------AQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLA 221 (344)
T ss_dssp TEEEEEECCCS-----------------SCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEE
T ss_pred CcEEEEEcCcC-----------------CceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeee
Confidence 4 45553211 1123455323333577766667888888887655432 1 1112345555
Q ss_pred EEecCcCeEEEEEccCCceEEEee
Q 011014 235 VLVAAAFFGYMLALLQRRVQAMFS 258 (495)
Q Consensus 235 vd~~a~~~~yv~d~~~~Rv~~~~~ 258 (495)
+... +..+.++...+..| +++.
T Consensus 222 ~~p~-~~~~l~sg~~dg~v-~~wd 243 (344)
T 4gqb_B 222 WHPQ-QSEVFVFGDENGTV-SLVD 243 (344)
T ss_dssp ECSS-CTTEEEEEETTSEE-EEEE
T ss_pred ecCC-CCcceEEeccCCcE-EEEE
Confidence 5532 33456666666666 3443
No 169
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=87.64 E-value=12 Score=35.43 Aligned_cols=145 Identities=8% Similarity=-0.025 Sum_probs=79.0
Q ss_pred CCceEEEEcCCCcEEEEECCCCeeEEEE---cCCCCccccccCCCcCccccCCcceEEEcCCCCEEEEECCCCEEEEEcC
Q 011014 83 MEPFSVAVSPSGELLVLDSENNSRPKLV---AGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMNMAIRKISD 159 (495)
Q Consensus 83 ~~P~GIAVd~dG~LyVaDs~n~~ii~iv---aGs~~g~~G~~dG~~~~a~f~~P~GIAVD~dGnIYVAD~~N~rIrk~d~ 159 (495)
.....++++++|+++++-..+. .+.+. .+......... ....-.....|+++++|+++++-..++.|+.++.
T Consensus 97 ~~v~~~~~~~~~~~l~~~~~d~-~v~i~d~~~~~~~~~~~~~----~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~ 171 (372)
T 1k8k_C 97 RAARCVRWAPNEKKFAVGSGSR-VISICYFEQENDWWVCKHI----KKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSA 171 (372)
T ss_dssp SCEEEEEECTTSSEEEEEETTS-SEEEEEEETTTTEEEEEEE----CTTCCSCEEEEEECTTSSEEEEEETTSCEEEEEC
T ss_pred CceeEEEECCCCCEEEEEeCCC-EEEEEEecCCCcceeeeee----ecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEc
Confidence 3567899999888666554443 23332 12110000000 0011234569999999998887777889999983
Q ss_pred C-------------------C--cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCC
Q 011014 160 T-------------------G--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHD 218 (495)
Q Consensus 160 ~-------------------G--V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~gN~rI~~~d~~g 218 (495)
. + +.++.+ .-.....++ ..+++.++++-..++.|+.++...
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~v~~~~-~~~~~~~l~~~~~d~~i~i~d~~~ 233 (372)
T 1k8k_C 172 YIKEVEERPAPTPWGSKMPFGELMFESSS-----------------SCGWVHGVC-FSANGSRVAWVSHDSTVCLADADK 233 (372)
T ss_dssp CCTTTSCCCCCBTTBSCCCTTCEEEECCC-----------------CSSCEEEEE-ECSSSSEEEEEETTTEEEEEEGGG
T ss_pred ccccccccccccccccccchhhheEecCC-----------------CCCeEEEEE-ECCCCCEEEEEeCCCEEEEEECCC
Confidence 2 1 111110 011234566 466666666666778899999866
Q ss_pred Cceee--CCCCCCcceEEEEecCcCeEEEEEccCCce
Q 011014 219 DDCSD--NYDDTFHLGIFVLVAAAFFGYMLALLQRRV 253 (495)
Q Consensus 219 ~~~~~--~~~~g~P~GIAvd~~a~~~~yv~d~~~~Rv 253 (495)
..+.. ....+....+++.. .+.+.++. ..+.|
T Consensus 234 ~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~-~d~~i 267 (372)
T 1k8k_C 234 KMAVATLASETLPLLAVTFIT--ESSLVAAG-HDCFP 267 (372)
T ss_dssp TTEEEEEECSSCCEEEEEEEE--TTEEEEEE-TTSSC
T ss_pred CceeEEEccCCCCeEEEEEec--CCCEEEEE-eCCeE
Confidence 55432 22222346677775 33333333 66666
No 170
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=87.61 E-value=24 Score=35.13 Aligned_cols=105 Identities=12% Similarity=0.035 Sum_probs=63.8
Q ss_pred cceEEEcC-CCCEEEEECCCCEEEEEcCCC--cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECCCC
Q 011014 133 PKGLAVDD-RGNIYIADTMNMAIRKISDTG--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQ 209 (495)
Q Consensus 133 P~GIAVD~-dGnIYVAD~~N~rIrk~d~~G--V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~gN~ 209 (495)
-.+|++.+ +++++++=...+.|+.+|-.+ +.++...... -..-..++ ...++.++++-..++
T Consensus 167 V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~--------------~~~~~~~~-~~~~~~~l~~g~~dg 231 (435)
T 4e54_B 167 ITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSDTI--------------NIWFCSLD-VSASSRMVVTGDNVG 231 (435)
T ss_dssp CCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECCSSC--------------SCCCCCEE-EETTTTEEEEECSSS
T ss_pred EEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEeccCCC--------------CccEEEEE-ECCCCCEEEEEeCCC
Confidence 35899986 788888877788999999655 3444322110 01223455 466777777777788
Q ss_pred eEEEEECCCCceeeCCCC-CCcceEEEEecCcCeEEEEEccCCce
Q 011014 210 AIREIQLHDDDCSDNYDD-TFHLGIFVLVAAAFFGYMLALLQRRV 253 (495)
Q Consensus 210 rI~~~d~~g~~~~~~~~~-g~P~GIAvd~~a~~~~yv~d~~~~Rv 253 (495)
.|+.+++.+..+...... +.-..|++... +..+.++......|
T Consensus 232 ~i~~wd~~~~~~~~~~~h~~~v~~v~~~p~-~~~~~~s~s~d~~v 275 (435)
T 4e54_B 232 NVILLNMDGKELWNLRMHKKKVTHVALNPC-CDWFLATASVDQTV 275 (435)
T ss_dssp BEEEEESSSCBCCCSBCCSSCEEEEEECTT-CSSEEEEEETTSBC
T ss_pred cEeeeccCcceeEEEecccceEEeeeecCC-CceEEEEecCccee
Confidence 899999888665443222 22345555431 23455566655656
No 171
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=87.43 E-value=16 Score=36.35 Aligned_cols=146 Identities=8% Similarity=-0.023 Sum_probs=85.9
Q ss_pred CceEEEEcC-CCcEEEEECCCCeeEEEEcCCCCc--cccccCCCcCccccCCcceEEEcCCCC-EEEEECCCCEEEEEcC
Q 011014 84 EPFSVAVSP-SGELLVLDSENNSRPKLVAGSPEG--YYGHVDGRPRGARMNHPKGLAVDDRGN-IYIADTMNMAIRKISD 159 (495)
Q Consensus 84 ~P~GIAVd~-dG~LyVaDs~n~~ii~ivaGs~~g--~~G~~dG~~~~a~f~~P~GIAVD~dGn-IYVAD~~N~rIrk~d~ 159 (495)
...+|++++ +++++++...+. .++++.-.... ..-. ...+.-..+..|++.++|. ++++=..++.|++++-
T Consensus 233 ~v~~v~~~p~~~~~l~s~~~dg-~i~i~d~~~~~~~~~~~----~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~ 307 (430)
T 2xyi_A 233 VVEDVAWHLLHESLFGSVADDQ-KLMIWDTRNNNTSKPSH----TVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDL 307 (430)
T ss_dssp CEEEEEECSSCTTEEEEEETTS-EEEEEETTCSCSSSCSE----EEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEET
T ss_pred CEeeeEEeCCCCCEEEEEeCCC-eEEEEECCCCCCCccee----EeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeC
Confidence 467888888 677888776665 55554322100 0000 0001123467999999886 7877777889999994
Q ss_pred C--C--cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCC-eEEEEECCCCeEEEEECCC---------------C
Q 011014 160 T--G--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSC-SLLVIDRGNQAIREIQLHD---------------D 219 (495)
Q Consensus 160 ~--G--V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G-~LyVaD~gN~rI~~~d~~g---------------~ 219 (495)
. + +.++.+.. .....|++ .+++ .++++-...++|+.+++.. .
T Consensus 308 ~~~~~~~~~~~~h~-----------------~~v~~i~~-sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~ 369 (430)
T 2xyi_A 308 RNLKLKLHSFESHK-----------------DEIFQVQW-SPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPE 369 (430)
T ss_dssp TCTTSCSEEEECCS-----------------SCEEEEEE-CSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTT
T ss_pred CCCCCCeEEeecCC-----------------CCEEEEEE-CCCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcc
Confidence 3 2 55553311 12345663 4444 6777777788899998876 2
Q ss_pred ceeeC-CCCCCcceEEEEecCcCeEEEEEccCCce
Q 011014 220 DCSDN-YDDTFHLGIFVLVAAAFFGYMLALLQRRV 253 (495)
Q Consensus 220 ~~~~~-~~~g~P~GIAvd~~a~~~~yv~d~~~~Rv 253 (495)
.+... ...+.+..+++... +..+.++....+.|
T Consensus 370 ~~~~~~~h~~~v~~~~~~p~-~~~~l~s~s~dg~i 403 (430)
T 2xyi_A 370 LLFIHGGHTAKISDFSWNPN-EPWIICSVSEDNIM 403 (430)
T ss_dssp EEEECCCCSSCEEEEEECSS-STTEEEEEETTSEE
T ss_pred eEEEcCCCCCCceEEEECCC-CCCEEEEEECCCCE
Confidence 22222 22345778888762 22256666666666
No 172
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=86.98 E-value=22 Score=34.21 Aligned_cols=147 Identities=7% Similarity=-0.029 Sum_probs=79.2
Q ss_pred CceEEEEcC-CCcEEEEECCCCeeEEEEcCCCCccccccCCCcCccccCCcceEEEcCCCCEEEEECCCCEEEEEcCCC-
Q 011014 84 EPFSVAVSP-SGELLVLDSENNSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMNMAIRKISDTG- 161 (495)
Q Consensus 84 ~P~GIAVd~-dG~LyVaDs~n~~ii~ivaGs~~g~~G~~dG~~~~a~f~~P~GIAVD~dGnIYVAD~~N~rIrk~d~~G- 161 (495)
.-.+|++.+ +++++++-..+. .+++..-......-. .+ ....-.....+++.++|+++++-..++.|+.++.++
T Consensus 120 ~v~~~~~~~~~~~~l~s~~~d~-~i~iwd~~~~~~~~~-~~--~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~ 195 (383)
T 3ei3_B 120 AITGMKFNQFNTNQLFVSSIRG-ATTLRDFSGSVIQVF-AK--TDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLDGH 195 (383)
T ss_dssp BEEEEEEETTEEEEEEEEETTT-EEEEEETTSCEEEEE-EC--CCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETTSC
T ss_pred ceeEEEeCCCCCCEEEEEeCCC-EEEEEECCCCceEEE-ec--cCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECCCC
Confidence 456777777 556555544443 344443211000000 00 000112356899999999888877789999999766
Q ss_pred -cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCe-EEEEECCCCeEEEEECCC----Ccee-eCCCCCCcceEE
Q 011014 162 -VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCS-LLVIDRGNQAIREIQLHD----DDCS-DNYDDTFHLGIF 234 (495)
Q Consensus 162 -V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~-LyVaD~gN~rI~~~d~~g----~~~~-~~~~~g~P~GIA 234 (495)
+.++.+.. ....+|+ ..+++. ++++-...+.|+.+++.. ..+. .....+....++
T Consensus 196 ~~~~~~~h~-----------------~~v~~~~-~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~ 257 (383)
T 3ei3_B 196 EIFKEKLHK-----------------AKVTHAE-FNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAY 257 (383)
T ss_dssp EEEEEECSS-----------------SCEEEEE-ECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEEECSSCEEEEE
T ss_pred EEEEeccCC-----------------CcEEEEE-ECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEecCCCceEEEE
Confidence 44443211 1234566 455555 666666678888888775 2332 222333445666
Q ss_pred EEecCcCeEEEEEccCCce
Q 011014 235 VLVAAAFFGYMLALLQRRV 253 (495)
Q Consensus 235 vd~~a~~~~yv~d~~~~Rv 253 (495)
+... .+...++......|
T Consensus 258 ~s~~-~~~~l~~~~~d~~i 275 (383)
T 3ei3_B 258 FNPT-DSTKLLTTDQRNEI 275 (383)
T ss_dssp ECTT-TSCEEEEEESSSEE
T ss_pred EcCC-CCCEEEEEcCCCcE
Confidence 6531 22334455555666
No 173
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=86.76 E-value=20 Score=40.86 Aligned_cols=115 Identities=10% Similarity=0.123 Sum_probs=64.7
Q ss_pred CceEEEEcCCCcEEEEECCCCeeEEEEcC-CCCccccccCCCcCccccCCcceEEEcCCCCEEEEECCCCEEEEEcC-CC
Q 011014 84 EPFSVAVSPSGELLVLDSENNSRPKLVAG-SPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMNMAIRKISD-TG 161 (495)
Q Consensus 84 ~P~GIAVd~dG~LyVaDs~n~~ii~ivaG-s~~g~~G~~dG~~~~a~f~~P~GIAVD~dGnIYVAD~~N~rIrk~d~-~G 161 (495)
.-.+++++++|.++++-..++ .+++..- +..-. ....+ .-.....++++++|+++++=..++.|+++|. +|
T Consensus 617 ~v~~~~~s~~~~~l~s~~~d~-~i~vw~~~~~~~~-~~~~~-----h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~ 689 (1249)
T 3sfz_A 617 AVYHACFSQDGQRIASCGADK-TLQVFKAETGEKL-LDIKA-----HEDEVLCCAFSSDDSYIATCSADKKVKIWDSATG 689 (1249)
T ss_dssp CEEEEEECTTSSEEEEEETTS-CEEEEETTTCCEE-EEECC-----CSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC
T ss_pred cEEEEEECCCCCEEEEEeCCC-eEEEEECCCCCEE-EEecc-----CCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCC
Confidence 456788999988777655444 4444432 21100 00011 1123468999999998877777889999994 44
Q ss_pred --cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECC-CCeEEEEECCCCeEEEEECCCCcee
Q 011014 162 --VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGS-SCSLLVIDRGNQAIREIQLHDDDCS 222 (495)
Q Consensus 162 --V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~-~G~LyVaD~gN~rI~~~d~~g~~~~ 222 (495)
+.++.+... .-..+++.+. ++.++++-..++.|+.++.....+.
T Consensus 690 ~~~~~~~~~~~-----------------~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~ 736 (1249)
T 3sfz_A 690 KLVHTYDEHSE-----------------QVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECR 736 (1249)
T ss_dssp CEEEEEECCSS-----------------CEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEE
T ss_pred ceEEEEcCCCC-----------------cEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchh
Confidence 455533110 1123332221 4445555556677777777665554
No 174
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=86.31 E-value=26 Score=34.25 Aligned_cols=120 Identities=13% Similarity=0.066 Sum_probs=72.1
Q ss_pred CceEEEEcCCCcEEEEECCCCeeEEEEcCC-CC--ccccccCCCcCccccCCcceEEEcCCCCEEEEECCCCEEEEEcCC
Q 011014 84 EPFSVAVSPSGELLVLDSENNSRPKLVAGS-PE--GYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMNMAIRKISDT 160 (495)
Q Consensus 84 ~P~GIAVd~dG~LyVaDs~n~~ii~ivaGs-~~--g~~G~~dG~~~~a~f~~P~GIAVD~dGnIYVAD~~N~rIrk~d~~ 160 (495)
.-..|++.++|+++++-+... .+++..-. .. ..... ..............++++++|.++++-..++.|+.+|..
T Consensus 251 ~v~~v~~~p~~~~l~s~s~D~-~i~lwd~~~~~~~~~~~~-~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~ 328 (380)
T 3iz6_a 251 DINSVKFFPDGQRFGTGSDDG-TCRLFDMRTGHQLQVYNR-EPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTL 328 (380)
T ss_dssp CCCEEEECTTSSEEEEECSSS-CEEEEETTTTEEEEEECC-CCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETT
T ss_pred CeEEEEEecCCCeEEEEcCCC-eEEEEECCCCcEEEEecc-cccccccccCceEEEEECCCCCEEEEEECCCCEEEEECC
Confidence 346788889888888776655 45554321 10 00000 000001122235689999999999998889999999943
Q ss_pred -C--cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCC
Q 011014 161 -G--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDD 219 (495)
Q Consensus 161 -G--V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~gN~rI~~~d~~g~ 219 (495)
+ +..+.....+ .-..-..++ ..++|.++++-...+.|+..+..+.
T Consensus 329 ~~~~~~~~~~~~~~-------------h~~~v~~l~-~s~dg~~l~sgs~D~~i~iW~~~~~ 376 (380)
T 3iz6_a 329 LAEMVLNLGTLQNS-------------HEGRISCLG-LSSDGSALCTGSWDKNLKIWAFSGH 376 (380)
T ss_dssp TCCEEEEECCSCSS-------------CCCCCCEEE-ECSSSSEEEEECTTSCEEEEECCSS
T ss_pred CCceEEEEecccCC-------------CCCceEEEE-ECCCCCEEEEeeCCCCEEEEecCCC
Confidence 3 3333111000 111235666 5788888888888888998887764
No 175
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=86.17 E-value=24 Score=35.11 Aligned_cols=158 Identities=9% Similarity=-0.030 Sum_probs=84.7
Q ss_pred CCceEEEEcCC-CcEEEEECCCCeeEEEEcCCCC-cccc-ccCCCcC---ccccCCcceEEEcCCCC-EEEEECCCCEEE
Q 011014 83 MEPFSVAVSPS-GELLVLDSENNSRPKLVAGSPE-GYYG-HVDGRPR---GARMNHPKGLAVDDRGN-IYIADTMNMAIR 155 (495)
Q Consensus 83 ~~P~GIAVd~d-G~LyVaDs~n~~ii~ivaGs~~-g~~G-~~dG~~~---~a~f~~P~GIAVD~dGn-IYVAD~~N~rIr 155 (495)
..+..|++.++ ++++++-..+. .+.++.-... .... ....... ...-....+|++++++. ++++=...+.|+
T Consensus 129 ~~v~~l~~~p~~~~~lat~~~dg-~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~ 207 (430)
T 2xyi_A 129 GEVNRARYMPQNACVIATKTPSS-DVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTIC 207 (430)
T ss_dssp SCCSEEEEETTEEEEEEEECSSS-CEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECTTSCEE
T ss_pred CcEEEEEECCCCCcEEEEECCCC-cEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCCeEE
Confidence 36788999986 56766665554 4555431110 0000 0000000 01112457899999887 777777788899
Q ss_pred EEcCCC----cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCc----eee-CCC
Q 011014 156 KISDTG----VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDD----CSD-NYD 226 (495)
Q Consensus 156 k~d~~G----V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~gN~rI~~~d~~g~~----~~~-~~~ 226 (495)
+++.+. ...+.-... ....-....+|++...++.++++...++.|+.+++.... +.. ...
T Consensus 208 vwd~~~~~~~~~~~~~~~~-----------~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~ 276 (430)
T 2xyi_A 208 LWDINATPKEHRVIDAKNI-----------FTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAH 276 (430)
T ss_dssp EEETTSCCBGGGEEECSEE-----------ECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECC
T ss_pred EEeCCCCCCCCceecccee-----------ecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecC
Confidence 998432 011100000 000112345666434367888888888999999987642 112 222
Q ss_pred CCCcceEEEEecCcCeEEEEEccCCce
Q 011014 227 DTFHLGIFVLVAAAFFGYMLALLQRRV 253 (495)
Q Consensus 227 ~g~P~GIAvd~~a~~~~yv~d~~~~Rv 253 (495)
.+....|++... +..++++......|
T Consensus 277 ~~~v~~i~~~p~-~~~~l~tg~~dg~v 302 (430)
T 2xyi_A 277 TAEVNCLSFNPY-SEFILATGSADKTV 302 (430)
T ss_dssp SSCEEEEEECSS-CTTEEEEEETTSEE
T ss_pred CCCeEEEEeCCC-CCCEEEEEeCCCeE
Confidence 334566776642 23467777777777
No 176
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=86.04 E-value=29 Score=37.06 Aligned_cols=149 Identities=12% Similarity=0.021 Sum_probs=82.9
Q ss_pred CceEEEEcCCCcEEEEECCCCeeEEEEcC-CCC---ccccccCCCcCccccCCcceEEEcCCCCEEEEECCCCEEEEEcC
Q 011014 84 EPFSVAVSPSGELLVLDSENNSRPKLVAG-SPE---GYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMNMAIRKISD 159 (495)
Q Consensus 84 ~P~GIAVd~dG~LyVaDs~n~~ii~ivaG-s~~---g~~G~~dG~~~~a~f~~P~GIAVD~dGnIYVAD~~N~rIrk~d~ 159 (495)
.-..|+++++|+++++-+... .+++..- +.. ...++ -..-..|+++++|+.+++=+..+.|++++.
T Consensus 432 ~v~~v~~s~~g~~l~sgs~Dg-~v~vwd~~~~~~~~~~~~h---------~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~ 501 (694)
T 3dm0_A 432 FVEDVVLSSDGQFALSGSWDG-ELRLWDLAAGVSTRRFVGH---------TKDVLSVAFSLDNRQIVSASRDRTIKLWNT 501 (694)
T ss_dssp CEEEEEECTTSSEEEEEETTS-EEEEEETTTTEEEEEEECC---------SSCEEEEEECTTSSCEEEEETTSCEEEECT
T ss_pred cEEEEEECCCCCEEEEEeCCC-cEEEEECCCCcceeEEeCC---------CCCEEEEEEeCCCCEEEEEeCCCEEEEEEC
Confidence 356789999999877766555 5555432 210 01111 123458899999998887777899999996
Q ss_pred CC--cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCC--eEEEEECCCCeEEEEECCCCceee--CCCCCCcceE
Q 011014 160 TG--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSC--SLLVIDRGNQAIREIQLHDDDCSD--NYDDTFHLGI 233 (495)
Q Consensus 160 ~G--V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G--~LyVaD~gN~rI~~~d~~g~~~~~--~~~~g~P~GI 233 (495)
.+ ..++.....+ .-..-.+++ ...++ .++++-...+.|+.+++....+.. ....+.-..+
T Consensus 502 ~~~~~~~~~~~~~~-------------h~~~v~~~~-~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v 567 (694)
T 3dm0_A 502 LGECKYTISEGGEG-------------HRDWVSCVR-FSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTV 567 (694)
T ss_dssp TSCEEEEECSSTTS-------------CSSCEEEEE-ECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEE
T ss_pred CCCcceeeccCCCC-------------CCCcEEEEE-EeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEE
Confidence 65 2333211100 011123444 33333 355555556777777777655432 2223334566
Q ss_pred EEEecCcCeEEEEEccCCceEEEeeC
Q 011014 234 FVLVAAAFFGYMLALLQRRVQAMFSS 259 (495)
Q Consensus 234 Avd~~a~~~~yv~d~~~~Rv~~~~~s 259 (495)
++.. .+...++....+.| +++.-
T Consensus 568 ~~sp--dg~~l~sg~~Dg~i-~iwd~ 590 (694)
T 3dm0_A 568 AVSP--DGSLCASGGKDGVV-LLWDL 590 (694)
T ss_dssp EECT--TSSEEEEEETTSBC-EEEET
T ss_pred EEeC--CCCEEEEEeCCCeE-EEEEC
Confidence 6664 44556666666666 34443
No 177
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=85.85 E-value=19 Score=32.26 Aligned_cols=127 Identities=6% Similarity=-0.070 Sum_probs=67.4
Q ss_pred CCCcEEEEECCCCeeEEEEcCCCCccccccCCCcCccccCCcceEEEcCCCCEEEEECCCCEEEEEcCC--C-cEEEecC
Q 011014 92 PSGELLVLDSENNSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMNMAIRKISDT--G-VTTIAGG 168 (495)
Q Consensus 92 ~dG~LyVaDs~n~~ii~ivaGs~~g~~G~~dG~~~~a~f~~P~GIAVD~dGnIYVAD~~N~rIrk~d~~--G-V~tiaGg 168 (495)
.++.|++-|..+.....+... . ....+++++++|+.+++.. +..|++++.+ + ...+.-+
T Consensus 20 ~~~~i~~~d~~~~~~~~~~~~---------~--------~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~ 81 (297)
T 2ojh_A 20 MRSSIEIFNIRTRKMRVVWQT---------P--------ELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTG 81 (297)
T ss_dssp CCEEEEEEETTTTEEEEEEEE---------S--------SCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCT
T ss_pred cceeEEEEeCCCCceeeeccC---------C--------cceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccc
Confidence 367788888766644333211 1 1345899999999666654 6789999843 3 3332111
Q ss_pred cccCCCCCCCCCCcCcccCCCceEEEECCCCe-EEEEEC---CCCeEEEEECCCCceeeCCCCCCcceEEEEecCcCeEE
Q 011014 169 KWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCS-LLVIDR---GNQAIREIQLHDDDCSDNYDDTFHLGIFVLVAAAFFGY 244 (495)
Q Consensus 169 ~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~-LyVaD~---gN~rI~~~d~~g~~~~~~~~~g~P~GIAvd~~a~~~~y 244 (495)
. .-....+++ ..++|. |+++.. +..+|..++..+..............+++... +..++
T Consensus 82 ~---------------~~~~~~~~~-~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~spd-g~~l~ 144 (297)
T 2ojh_A 82 F---------------ATICNNDHG-ISPDGALYAISDKVEFGKSAIYLLPSTGGTPRLMTKNLPSYWHGWSPD-GKSFT 144 (297)
T ss_dssp T---------------CCCBCSCCE-ECTTSSEEEEEECTTTSSCEEEEEETTCCCCEECCSSSSEEEEEECTT-SSEEE
T ss_pred c---------------ccccccceE-ECCCCCEEEEEEeCCCCcceEEEEECCCCceEEeecCCCccceEECCC-CCEEE
Confidence 0 001234455 345554 444442 35788888877765544333333455555532 33445
Q ss_pred EEEccCCce
Q 011014 245 MLALLQRRV 253 (495)
Q Consensus 245 v~d~~~~Rv 253 (495)
++......+
T Consensus 145 ~~~~~~~~~ 153 (297)
T 2ojh_A 145 YCGIRDQVF 153 (297)
T ss_dssp EEEEETTEE
T ss_pred EEECCCCce
Confidence 444444444
No 178
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=85.34 E-value=23 Score=34.54 Aligned_cols=73 Identities=12% Similarity=0.047 Sum_probs=44.8
Q ss_pred CcceEEEcC-CCCEEEEECCCCEEEEEcC-CC---------cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCC-
Q 011014 132 HPKGLAVDD-RGNIYIADTMNMAIRKISD-TG---------VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSC- 199 (495)
Q Consensus 132 ~P~GIAVD~-dGnIYVAD~~N~rIrk~d~-~G---------V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G- 199 (495)
.-.+|++++ +++++++=..++.|++++- ++ +.++.+. -.....|+ ..+++
T Consensus 83 ~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h-----------------~~~v~~~~-~~p~~~ 144 (402)
T 2aq5_A 83 PVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGH-----------------TKRVGIVA-WHPTAQ 144 (402)
T ss_dssp CEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECC-----------------SSCEEEEE-ECSSBT
T ss_pred CEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCC-----------------CCeEEEEE-ECcCCC
Confidence 346899999 8888887777889999983 22 2333221 01234455 34554
Q ss_pred eEEEEECCCCeEEEEECCCCcee
Q 011014 200 SLLVIDRGNQAIREIQLHDDDCS 222 (495)
Q Consensus 200 ~LyVaD~gN~rI~~~d~~g~~~~ 222 (495)
+++++-...+.|+.+++....+.
T Consensus 145 ~~l~s~~~dg~i~iwd~~~~~~~ 167 (402)
T 2aq5_A 145 NVLLSAGCDNVILVWDVGTGAAV 167 (402)
T ss_dssp TEEEEEETTSCEEEEETTTTEEE
T ss_pred CEEEEEcCCCEEEEEECCCCCcc
Confidence 45555555677888887765543
No 179
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=84.99 E-value=23 Score=38.55 Aligned_cols=117 Identities=15% Similarity=0.114 Sum_probs=67.6
Q ss_pred CceEEEEcCCCcEEEEECCCCeeEEEEcCCCCccccccCCCcCccccCCcceEEEcCCCCEEEEECCCCEEEEEcCCC--
Q 011014 84 EPFSVAVSPSGELLVLDSENNSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMNMAIRKISDTG-- 161 (495)
Q Consensus 84 ~P~GIAVd~dG~LyVaDs~n~~ii~ivaGs~~g~~G~~dG~~~~a~f~~P~GIAVD~dGnIYVAD~~N~rIrk~d~~G-- 161 (495)
....|..|++|+|||+...+.++.++-..+..-..-..++. ..-..+.+|..|.+|+|||+- ++-|.++++..
T Consensus 473 ~i~~i~~d~~g~lWi~~~t~~Gl~~~d~~~~~~~~~~~~~~---~~~~~~~~i~~d~~g~lWigt--~~Gl~~~~~~~~~ 547 (758)
T 3ott_A 473 FINQIIPDNEGNVWVLLYNNKGIDKINPRTREVTKLFADEL---TGEKSPNYLLCDEDGLLWVGF--HGGVMRINPKDES 547 (758)
T ss_dssp CEEEEEECTTSCEEEEETTCSSEEEEETTTTEEEEECTTTS---CGGGCEEEEEECTTSCEEEEE--TTEEEEECC--CC
T ss_pred eeeeEEEcCCCCEEEEccCCCCcEEEeCCCCceEEecCCCc---CCCcccceEEECCCCCEEEEe--cCceEEEecCCCc
Confidence 36778999999999944333445554332210000000110 012356789999999999995 35799999654
Q ss_pred cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCceee
Q 011014 162 VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCSD 223 (495)
Q Consensus 162 V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~gN~rI~~~d~~g~~~~~ 223 (495)
+..+. . ++.. -+...+|+ . .+|+|||+- ++-|.+|++....+..
T Consensus 548 ~~~~~--~--------~gl~----~~~i~~i~-~-~~g~lWi~t--~~Gl~~~~~~~~~~~~ 591 (758)
T 3ott_A 548 QQSIS--F--------GSFS----NNEILSMT-C-VKNSIWVST--TNGLWIIDRKTMDARQ 591 (758)
T ss_dssp CCBCC--C--------CC-------CCEEEEE-E-ETTEEEEEE--SSCEEEEETTTCCEEE
T ss_pred eEEec--c--------cCCC----ccceEEEE-E-CCCCEEEEC--CCCeEEEcCCCceeEE
Confidence 22220 0 1101 12345555 3 489999998 4569999998866553
No 180
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=84.82 E-value=25 Score=38.27 Aligned_cols=144 Identities=14% Similarity=0.093 Sum_probs=79.7
Q ss_pred CceEEEEcCCCcEEEEECCCCeeEEEEcCCC----Cccc------cccCCCcCccccCCcceEEEcCCCCEEEEECCCCE
Q 011014 84 EPFSVAVSPSGELLVLDSENNSRPKLVAGSP----EGYY------GHVDGRPRGARMNHPKGLAVDDRGNIYIADTMNMA 153 (495)
Q Consensus 84 ~P~GIAVd~dG~LyVaDs~n~~ii~ivaGs~----~g~~------G~~dG~~~~a~f~~P~GIAVD~dGnIYVAD~~N~r 153 (495)
.-..|+.|++|+|||+-..+. +..+-.... .+.. ...++. .-+....|+.|.+|+|||+...++.
T Consensus 420 ~v~~i~~d~~g~lWigT~~~G-l~~~~~~~~~~~~~~~~~~~~~~~~~~~l----~~~~i~~i~~d~~g~lWi~~~t~~G 494 (758)
T 3ott_A 420 WTYYIFEDTAGQLWISTCLGG-IFVVDKHKLMQSTSGQYIAEQNYSVHNGL----SGMFINQIIPDNEGNVWVLLYNNKG 494 (758)
T ss_dssp SEEEEEECTTSEEEEEESSSC-EEEEEHHHHHHCCSSEEECSEEECGGGTC----SCSCEEEEEECTTSCEEEEETTCSS
T ss_pred eEEEEEEcCCCCEEEEECCCc-eEEEccccccccCCcceeccccccccccc----ccceeeeEEEcCCCCEEEEccCCCC
Confidence 346788899999999876543 433321100 0000 000110 0123568999999999995444567
Q ss_pred EEEEcCCC--cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCceeeCCCCCCc-
Q 011014 154 IRKISDTG--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCSDNYDDTFH- 230 (495)
Q Consensus 154 Irk~d~~G--V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~gN~rI~~~d~~g~~~~~~~~~g~P- 230 (495)
|.+++... +..+... +. ..-..+.+++ .|.+|+|||+-. +.|.++++.+.........++|
T Consensus 495 l~~~d~~~~~~~~~~~~----------~~---~~~~~~~~i~-~d~~g~lWigt~--~Gl~~~~~~~~~~~~~~~~gl~~ 558 (758)
T 3ott_A 495 IDKINPRTREVTKLFAD----------EL---TGEKSPNYLL-CDEDGLLWVGFH--GGVMRINPKDESQQSISFGSFSN 558 (758)
T ss_dssp EEEEETTTTEEEEECTT----------TS---CGGGCEEEEE-ECTTSCEEEEET--TEEEEECC--CCCCBCCCCC---
T ss_pred cEEEeCCCCceEEecCC----------Cc---CCCcccceEE-ECCCCCEEEEec--CceEEEecCCCceEEecccCCCc
Confidence 99999654 4433110 00 0012456676 799999999974 4699999877654432233443
Q ss_pred ---ceEEEEecCcCeEEEEEccCCce
Q 011014 231 ---LGIFVLVAAAFFGYMLALLQRRV 253 (495)
Q Consensus 231 ---~GIAvd~~a~~~~yv~d~~~~Rv 253 (495)
.+|..+ .+.+|++. ++.+
T Consensus 559 ~~i~~i~~~---~g~lWi~t--~~Gl 579 (758)
T 3ott_A 559 NEILSMTCV---KNSIWVST--TNGL 579 (758)
T ss_dssp CCEEEEEEE---TTEEEEEE--SSCE
T ss_pred cceEEEEEC---CCCEEEEC--CCCe
Confidence 344433 45677765 4556
No 181
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=84.60 E-value=31 Score=33.62 Aligned_cols=112 Identities=10% Similarity=-0.035 Sum_probs=71.6
Q ss_pred cceEEEcCCCCEEEEECCCCEEEEEcC-CC--cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECCCC
Q 011014 133 PKGLAVDDRGNIYIADTMNMAIRKISD-TG--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQ 209 (495)
Q Consensus 133 P~GIAVD~dGnIYVAD~~N~rIrk~d~-~G--V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~gN~ 209 (495)
-..|++.++|+.+++=...+.|+.+|. .| +.++...... .......-..++ ...+|.++++-..++
T Consensus 252 v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~----------~~~~~~~v~~~~-~s~~g~~l~~g~~dg 320 (380)
T 3iz6_a 252 INSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDR----------NDNELPIVTSVA-FSISGRLLFAGYSNG 320 (380)
T ss_dssp CCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSS----------SCCSSCSCSEEE-ECSSSSEEEEECTTS
T ss_pred eEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccc----------cccccCceEEEE-ECCCCCEEEEEECCC
Confidence 458999999999998888899999994 44 3444221100 011122345677 578888888888899
Q ss_pred eEEEEECCCCceee------CCCCCCcceEEEEecCcCeEEEEEccCCceEEEee
Q 011014 210 AIREIQLHDDDCSD------NYDDTFHLGIFVLVAAAFFGYMLALLQRRVQAMFS 258 (495)
Q Consensus 210 rI~~~d~~g~~~~~------~~~~g~P~GIAvd~~a~~~~yv~d~~~~Rv~~~~~ 258 (495)
.|+.++.....+.. ....+.-..+++.. .+...++......| ++|.
T Consensus 321 ~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~--dg~~l~sgs~D~~i-~iW~ 372 (380)
T 3iz6_a 321 DCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSS--DGSALCTGSWDKNL-KIWA 372 (380)
T ss_dssp CEEEEETTTCCEEEEECCSCSSCCCCCCEEEECS--SSSEEEEECTTSCE-EEEE
T ss_pred CEEEEECCCCceEEEEecccCCCCCceEEEEECC--CCCEEEEeeCCCCE-EEEe
Confidence 99999987655432 12223345666664 44556677777777 3443
No 182
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=83.23 E-value=5.5 Score=39.27 Aligned_cols=71 Identities=11% Similarity=0.087 Sum_probs=51.3
Q ss_pred cceEEEcCCCCEEEEECCCCEEEEEcC-CC--cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECCCC
Q 011014 133 PKGLAVDDRGNIYIADTMNMAIRKISD-TG--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQ 209 (495)
Q Consensus 133 P~GIAVD~dGnIYVAD~~N~rIrk~d~-~G--V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~gN~ 209 (495)
-..|+++++|+++++=...+.|+.+|. ++ +.++..+ .-..-++|+ ..++|.++++-...+
T Consensus 272 V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~g----------------H~~~V~~v~-fSpdg~~laS~S~D~ 334 (365)
T 4h5i_A 272 ITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQA----------------HSFAITEVT-ISPDSTYVASVSAAN 334 (365)
T ss_dssp EEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTS----------------SSSCEEEEE-ECTTSCEEEEEETTS
T ss_pred eEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCc----------------ccCCEEEEE-ECCCCCEEEEEeCCC
Confidence 458999999998887777889999995 44 3444211 011345677 688999999888889
Q ss_pred eEEEEECCCCc
Q 011014 210 AIREIQLHDDD 220 (495)
Q Consensus 210 rI~~~d~~g~~ 220 (495)
.|+++++..+.
T Consensus 335 tvrvw~ip~~~ 345 (365)
T 4h5i_A 335 TIHIIKLPLNY 345 (365)
T ss_dssp EEEEEECCTTT
T ss_pred eEEEEEcCCCC
Confidence 99999976543
No 183
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=83.14 E-value=21 Score=34.43 Aligned_cols=153 Identities=8% Similarity=0.001 Sum_probs=81.6
Q ss_pred CceEEEEcCC-CcEEEEECCCCeeEEEEcCCCCccccccCCCc-CccccCCcceEEEcCCC-CEEEEECCCC---EEEEE
Q 011014 84 EPFSVAVSPS-GELLVLDSENNSRPKLVAGSPEGYYGHVDGRP-RGARMNHPKGLAVDDRG-NIYIADTMNM---AIRKI 157 (495)
Q Consensus 84 ~P~GIAVd~d-G~LyVaDs~n~~ii~ivaGs~~g~~G~~dG~~-~~a~f~~P~GIAVD~dG-nIYVAD~~N~---rIrk~ 157 (495)
....|++.++ ++++++-..+. .+++..-............. ....-.....|+++++| .++++-..++ .|+.+
T Consensus 167 ~v~~~~~~~~~~~~l~~~~~dg-~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~ 245 (416)
T 2pm9_A 167 EVISLAWNQSLAHVFASAGSSN-FASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIW 245 (416)
T ss_dssp CCCEEEECSSCTTEEEEESSSS-CEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEE
T ss_pred CeeEEEeCCCCCcEEEEEcCCC-CEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEE
Confidence 4568899987 67777765554 44444321100000000000 00002345689999987 5666655555 88888
Q ss_pred cCCC----cEEEe-cCcccCCCCCCCCCCcCcccCCCceEEEECC-CCeEEEEECCCCeEEEEECCCCceee--CCCCCC
Q 011014 158 SDTG----VTTIA-GGKWSRGVGHVDGPSEDAKFSNDFDVVYVGS-SCSLLVIDRGNQAIREIQLHDDDCSD--NYDDTF 229 (495)
Q Consensus 158 d~~G----V~tia-Gg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~-~G~LyVaD~gN~rI~~~d~~g~~~~~--~~~~g~ 229 (495)
|... +.++. + .-.....+++ .+ ++.++++-..++.|+.+++....+.. ....+.
T Consensus 246 d~~~~~~~~~~~~~~-----------------~~~~v~~~~~-s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~ 307 (416)
T 2pm9_A 246 DLRNANTPLQTLNQG-----------------HQKGILSLDW-CHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNW 307 (416)
T ss_dssp ETTSTTSCSBCCCSC-----------------CSSCEEEEEE-CSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSC
T ss_pred eCCCCCCCcEEeecC-----------------ccCceeEEEe-CCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCc
Confidence 8432 22221 1 0113345663 44 66666666667888888877655432 222333
Q ss_pred cceEEEEecCcC-eEEEEEccCCceEEEee
Q 011014 230 HLGIFVLVAAAF-FGYMLALLQRRVQAMFS 258 (495)
Q Consensus 230 P~GIAvd~~a~~-~~yv~d~~~~Rv~~~~~ 258 (495)
-..+++.. .+ .++++......| .++.
T Consensus 308 v~~~~~s~--~~~~~l~s~~~d~~i-~iw~ 334 (416)
T 2pm9_A 308 CFKTKFAP--EAPDLFACASFDNKI-EVQT 334 (416)
T ss_dssp CCCEEECT--TCTTEEEECCSSSEE-EEEE
T ss_pred eEEEEECC--CCCCEEEEEecCCcE-EEEE
Confidence 45677765 23 456666666666 3443
No 184
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=82.91 E-value=23 Score=34.03 Aligned_cols=111 Identities=16% Similarity=0.197 Sum_probs=62.9
Q ss_pred ceEEEEcCCCcEEEEECCCCeeEEEEcCCCCc---cccccCCCcCccccCCcceEEEcCCCCEEEEECCCCEEEEEcCC-
Q 011014 85 PFSVAVSPSGELLVLDSENNSRPKLVAGSPEG---YYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMNMAIRKISDT- 160 (495)
Q Consensus 85 P~GIAVd~dG~LyVaDs~n~~ii~ivaGs~~g---~~G~~dG~~~~a~f~~P~GIAVD~dGnIYVAD~~N~rIrk~d~~- 160 (495)
-..|+++++|.++++-..+. .+++..-.... ..-...+ .-..-..|+++++|+++++=...+.|+.++.+
T Consensus 19 v~~l~~sp~g~~las~~~D~-~i~iw~~~~~~~~~~~~~~~~-----h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~ 92 (345)
T 3fm0_A 19 CWFLAWNPAGTLLASCGGDR-RIRIWGTEGDSWICKSVLSEG-----HQRTVRKVAWSPCGNYLASASFDATTCIWKKNQ 92 (345)
T ss_dssp EEEEEECTTSSCEEEEETTS-CEEEEEEETTEEEEEEEECSS-----CSSCEEEEEECTTSSEEEEEETTSCEEEEEECC
T ss_pred EEEEEECCCCCEEEEEcCCC-eEEEEEcCCCcceeeeeeccc-----cCCcEEEEEECCCCCEEEEEECCCcEEEEEccC
Confidence 46789999999777765554 44443211100 0000001 11234589999999987776667778777732
Q ss_pred C----cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCC
Q 011014 161 G----VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDD 219 (495)
Q Consensus 161 G----V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~gN~rI~~~d~~g~ 219 (495)
+ +.++.+-. ..-..|+ ..++++++++-...+.|+.++....
T Consensus 93 ~~~~~~~~~~~h~-----------------~~v~~v~-~sp~~~~l~s~s~D~~v~iwd~~~~ 137 (345)
T 3fm0_A 93 DDFECVTTLEGHE-----------------NEVKSVA-WAPSGNLLATCSRDKSVWVWEVDEE 137 (345)
T ss_dssp C-EEEEEEECCCS-----------------SCEEEEE-ECTTSSEEEEEETTSCEEEEEECTT
T ss_pred CCeEEEEEccCCC-----------------CCceEEE-EeCCCCEEEEEECCCeEEEEECCCC
Confidence 2 23332210 1224555 4666777766666777888877653
No 185
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=82.80 E-value=36 Score=32.94 Aligned_cols=103 Identities=9% Similarity=-0.037 Sum_probs=61.4
Q ss_pred cceEEEcCCCCEEEEECCCCEEEEEcCCC---cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECCCC
Q 011014 133 PKGLAVDDRGNIYIADTMNMAIRKISDTG---VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQ 209 (495)
Q Consensus 133 P~GIAVD~dGnIYVAD~~N~rIrk~d~~G---V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~gN~ 209 (495)
-..|+++++|+++++=...+.|+.+|... +..+.... .......++ ...+|.++++-...+
T Consensus 243 v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~---------------~~~~~~~~~-~s~~g~~l~~g~~d~ 306 (354)
T 2pbi_B 243 VNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKES---------------IIFGASSVD-FSLSGRLLFAGYNDY 306 (354)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTT---------------CCSCEEEEE-ECTTSSEEEEEETTS
T ss_pred eEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCC---------------cccceeEEE-EeCCCCEEEEEECCC
Confidence 45899999999888877789999999443 33331110 011234555 567777777777778
Q ss_pred eEEEEECCCCcee-e-CCCCCCcceEEEEecCcCeEEEEEccCCce
Q 011014 210 AIREIQLHDDDCS-D-NYDDTFHLGIFVLVAAAFFGYMLALLQRRV 253 (495)
Q Consensus 210 rI~~~d~~g~~~~-~-~~~~g~P~GIAvd~~a~~~~yv~d~~~~Rv 253 (495)
.|+.++.....+. . ....+.-..+++.. .+...++....+.|
T Consensus 307 ~i~vwd~~~~~~~~~l~~h~~~v~~l~~sp--dg~~l~sgs~D~~v 350 (354)
T 2pbi_B 307 TINVWDVLKGSRVSILFGHENRVSTLRVSP--DGTAFCSGSWDHTL 350 (354)
T ss_dssp CEEEEETTTCSEEEEECCCSSCEEEEEECT--TSSCEEEEETTSEE
T ss_pred cEEEEECCCCceEEEEECCCCcEEEEEECC--CCCEEEEEcCCCCE
Confidence 8999987554432 2 22223345556554 33344555555555
No 186
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=82.77 E-value=23 Score=35.02 Aligned_cols=27 Identities=15% Similarity=0.100 Sum_probs=22.8
Q ss_pred ceEEEcCCCCEEEEECCCCEEEEEcCC
Q 011014 134 KGLAVDDRGNIYIADTMNMAIRKISDT 160 (495)
Q Consensus 134 ~GIAVD~dGnIYVAD~~N~rIrk~d~~ 160 (495)
..|++.++|+++++=+.++.|+.++..
T Consensus 151 ~sv~fspdg~~lasgs~Dg~v~iWd~~ 177 (420)
T 4gga_A 151 SSVAWIKEGNYLAVGTSSAEVQLWDVQ 177 (420)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred EEEEECCCCCEEEEEECCCeEEEEEcC
Confidence 589999999988877778899999943
No 187
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=81.75 E-value=37 Score=32.35 Aligned_cols=146 Identities=5% Similarity=-0.081 Sum_probs=76.4
Q ss_pred CceEEEEcC--CCcEEEEECCCCeeEEEEcCCCCccccccCCCcCccccCCcceEEEcCCCCEEEEECCCCEEEEEcC-C
Q 011014 84 EPFSVAVSP--SGELLVLDSENNSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMNMAIRKISD-T 160 (495)
Q Consensus 84 ~P~GIAVd~--dG~LyVaDs~n~~ii~ivaGs~~g~~G~~dG~~~~a~f~~P~GIAVD~dGnIYVAD~~N~rIrk~d~-~ 160 (495)
.-..|++++ +|+++++-+... .+++..-..........+ ..-.....++++++|.++++=..++.|+.+|. .
T Consensus 127 ~v~~~~~~~~~~~~~l~s~s~dg-~i~~wd~~~~~~~~~~~~----~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~ 201 (343)
T 3lrv_A 127 EIIYMYGHNEVNTEYFIWADNRG-TIGFQSYEDDSQYIVHSA----KSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSS 201 (343)
T ss_dssp CEEEEECCC---CCEEEEEETTC-CEEEEESSSSCEEEEECC----CSSCCCCEEEECTTSCEEEEECTTSCEEEEESSC
T ss_pred CEEEEEcCCCCCCCEEEEEeCCC-cEEEEECCCCcEEEEEec----CCCCceEEEEECCCCCEEEEEcCCCEEEEEECCC
Confidence 356788888 888777655444 344443111000000000 01113568999999999888777899999994 3
Q ss_pred C--c-EEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCceeeC-C---CCCCcc--
Q 011014 161 G--V-TTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCSDN-Y---DDTFHL-- 231 (495)
Q Consensus 161 G--V-~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~gN~rI~~~d~~g~~~~~~-~---~~g~P~-- 231 (495)
+ + .++.++- -..-..|+ ..++|..+++-..+ .|+.+++....+... . ....+.
T Consensus 202 ~~~~~~~~~~~h----------------~~~v~~l~-fs~~g~~l~s~~~~-~v~iwd~~~~~~~~~~~~~~~~~~~~~~ 263 (343)
T 3lrv_A 202 PDQASSRFPVDE----------------EAKIKEVK-FADNGYWMVVECDQ-TVVCFDLRKDVGTLAYPTYTIPEFKTGT 263 (343)
T ss_dssp TTSCCEECCCCT----------------TSCEEEEE-ECTTSSEEEEEESS-BEEEEETTSSTTCBSSCCCBC-----CC
T ss_pred CCCCccEEeccC----------------CCCEEEEE-EeCCCCEEEEEeCC-eEEEEEcCCCCcceeecccccccccccc
Confidence 3 3 3442200 01234566 46666655554444 999999887654321 1 112333
Q ss_pred -eEEEEecCcCeEEEEEcc-CCceE
Q 011014 232 -GIFVLVAAAFFGYMLALL-QRRVQ 254 (495)
Q Consensus 232 -GIAvd~~a~~~~yv~d~~-~~Rv~ 254 (495)
.++++. .+...++... .+.+.
T Consensus 264 ~~~~~~~--~g~~l~~~s~~d~~i~ 286 (343)
T 3lrv_A 264 VTYDIDD--SGKNMIAYSNESNSLT 286 (343)
T ss_dssp EEEEECT--TSSEEEEEETTTTEEE
T ss_pred eEEEECC--CCCEEEEecCCCCcEE
Confidence 377775 3333344333 56663
No 188
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=81.69 E-value=20 Score=35.84 Aligned_cols=119 Identities=9% Similarity=0.039 Sum_probs=61.4
Q ss_pred CCceEEEEcCCCcEEEEECCCCeeEEEEcCCCCccccccCCCcCccccCCcceEEEcCC---CCEEEEECCCCEEEEEc-
Q 011014 83 MEPFSVAVSPSGELLVLDSENNSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDR---GNIYIADTMNMAIRKIS- 158 (495)
Q Consensus 83 ~~P~GIAVd~dG~LyVaDs~n~~ii~ivaGs~~g~~G~~dG~~~~a~f~~P~GIAVD~d---GnIYVAD~~N~rIrk~d- 158 (495)
..+.+|+++++|.++++-.... .+.++.-.. +......-............|+++++ |+++++=...+.|++++
T Consensus 150 ~~v~~~~~sp~~~~l~~~~~~g-~v~~~~~~~-~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~ 227 (450)
T 2vdu_B 150 KRPNAISIAEDDTTVIIADKFG-DVYSIDINS-IPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHY 227 (450)
T ss_dssp SCEEEEEECTTSSEEEEEETTS-EEEEEETTS-CCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEE
T ss_pred CCceEEEEcCCCCEEEEEeCCC-cEEEEecCC-cccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEEC
Confidence 3678999999987555443333 344432110 00000000000112234568999998 87666655678899988
Q ss_pred CCC--cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCce
Q 011014 159 DTG--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDC 221 (495)
Q Consensus 159 ~~G--V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~gN~rI~~~d~~g~~~ 221 (495)
..+ +.++..+- -.....++ .. ++.++++-...+.|+.+++....+
T Consensus 228 ~~~~~~~~~~~~h----------------~~~v~~~~-~s-d~~~l~s~~~d~~v~vwd~~~~~~ 274 (450)
T 2vdu_B 228 PQCFIVDKWLFGH----------------KHFVSSIC-CG-KDYLLLSAGGDDKIFAWDWKTGKN 274 (450)
T ss_dssp SCTTCEEEECCCC----------------SSCEEEEE-EC-STTEEEEEESSSEEEEEETTTCCE
T ss_pred CCCceeeeeecCC----------------CCceEEEE-EC-CCCEEEEEeCCCeEEEEECCCCcE
Confidence 334 33432110 01234455 34 555555555666777777665443
No 189
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=81.49 E-value=42 Score=32.78 Aligned_cols=106 Identities=14% Similarity=0.047 Sum_probs=59.8
Q ss_pred CcceEEEcCCC-CEEEEEC--CCCEEEEEcC-CC--cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEE-
Q 011014 132 HPKGLAVDDRG-NIYIADT--MNMAIRKISD-TG--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVI- 204 (495)
Q Consensus 132 ~P~GIAVD~dG-nIYVAD~--~N~rIrk~d~-~G--V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVa- 204 (495)
....|++.++| +++++-. .++.|+.+|. .+ +.++... .....++ ..+++..+++
T Consensus 261 ~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~~------------------~~v~~~~-~s~~~~~l~~~ 321 (401)
T 4aez_A 261 AVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVDAG------------------SQVTSLI-WSPHSKEIMST 321 (401)
T ss_dssp CCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEECS------------------SCEEEEE-ECSSSSEEEEE
T ss_pred eEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEeCC------------------CcEEEEE-ECCCCCeEEEE
Confidence 34689999866 5776644 5889999994 44 3444211 1234555 4555655555
Q ss_pred -ECCCCeEEEEECCCCceee----CCCCCCcceEEEEecCcCeEEEEEccCCceEEEeeC
Q 011014 205 -DRGNQAIREIQLHDDDCSD----NYDDTFHLGIFVLVAAAFFGYMLALLQRRVQAMFSS 259 (495)
Q Consensus 205 -D~gN~rI~~~d~~g~~~~~----~~~~g~P~GIAvd~~a~~~~yv~d~~~~Rv~~~~~s 259 (495)
...++.|+.++.....+.. ....+....+++.. .+...++......| .+|.-
T Consensus 322 ~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~--dg~~l~s~~~dg~i-~iw~~ 378 (401)
T 4aez_A 322 HGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSP--DGRILSTAASDENL-KFWRV 378 (401)
T ss_dssp ECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECT--TSSEEEEECTTSEE-EEEEC
T ss_pred eecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECC--CCCEEEEEeCCCcE-EEEEC
Confidence 3357788888877644321 22333456666664 34445555556666 34433
No 190
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=81.02 E-value=40 Score=32.22 Aligned_cols=101 Identities=9% Similarity=0.039 Sum_probs=61.4
Q ss_pred cceEEEcCCCCEEEEECCCCEEEEEcC-CC--cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECCCC
Q 011014 133 PKGLAVDDRGNIYIADTMNMAIRKISD-TG--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQ 209 (495)
Q Consensus 133 P~GIAVD~dGnIYVAD~~N~rIrk~d~-~G--V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~gN~ 209 (495)
-..+++.++|+++++-...+.|+.+|. .+ +.++.+.. ....+|+ ..+++.++++-...+
T Consensus 187 v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~-----------------~~v~~v~-~~p~~~~l~s~s~d~ 248 (340)
T 1got_B 187 VMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHE-----------------SDINAIC-FFPNGNAFATGSDDA 248 (340)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCS-----------------SCEEEEE-ECTTSSEEEEEETTS
T ss_pred eEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcCCc-----------------CCEEEEE-EcCCCCEEEEEcCCC
Confidence 458999999999998888899999994 44 44442210 1234566 566777777777778
Q ss_pred eEEEEECCCCceee-CCCCCC---cceEEEEecCcCeEEEEEccCCce
Q 011014 210 AIREIQLHDDDCSD-NYDDTF---HLGIFVLVAAAFFGYMLALLQRRV 253 (495)
Q Consensus 210 rI~~~d~~g~~~~~-~~~~g~---P~GIAvd~~a~~~~yv~d~~~~Rv 253 (495)
.|+.+++....... ...... -..+++.. .+...++......|
T Consensus 249 ~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~--~g~~l~~g~~d~~i 294 (340)
T 1got_B 249 TCRLFDLRADQELMTYSHDNIICGITSVSFSK--SGRLLLAGYDDFNC 294 (340)
T ss_dssp CEEEEETTTTEEEEEECCTTCCSCEEEEEECT--TSSEEEEEETTSEE
T ss_pred cEEEEECCCCcEEEEEccCCcccceEEEEECC--CCCEEEEECCCCeE
Confidence 88888887654332 111111 23344443 33444555555555
No 191
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=80.99 E-value=31 Score=33.15 Aligned_cols=115 Identities=6% Similarity=-0.011 Sum_probs=66.8
Q ss_pred CceEEEEcCCC-cEEEEECCCC--eeEEEEcCCCCccccccCCCcCc-cccCCcceEEEcC-CCCEEEEECCCCEEEEEc
Q 011014 84 EPFSVAVSPSG-ELLVLDSENN--SRPKLVAGSPEGYYGHVDGRPRG-ARMNHPKGLAVDD-RGNIYIADTMNMAIRKIS 158 (495)
Q Consensus 84 ~P~GIAVd~dG-~LyVaDs~n~--~ii~ivaGs~~g~~G~~dG~~~~-a~f~~P~GIAVD~-dGnIYVAD~~N~rIrk~d 158 (495)
....++++++| .++++-..+. ..+++..-......-. ... ..-.....|++++ +++++++-..++.|+.++
T Consensus 216 ~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~----~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd 291 (416)
T 2pm9_A 216 QLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQ----TLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWN 291 (416)
T ss_dssp CEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSB----CCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEEC
T ss_pred ceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcE----EeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEee
Confidence 46788999887 4555544332 1334432111000000 000 1123456899998 888887777789999999
Q ss_pred C-CC--cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCC-eEEEEECCCCeEEEEECCCCc
Q 011014 159 D-TG--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSC-SLLVIDRGNQAIREIQLHDDD 220 (495)
Q Consensus 159 ~-~G--V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G-~LyVaD~gN~rI~~~d~~g~~ 220 (495)
. .+ +.++.+.. .....++ ..+++ .++++-...+.|+.+++....
T Consensus 292 ~~~~~~~~~~~~~~-----------------~~v~~~~-~s~~~~~~l~s~~~d~~i~iw~~~~~~ 339 (416)
T 2pm9_A 292 PESAEQLSQFPARG-----------------NWCFKTK-FAPEAPDLFACASFDNKIEVQTLQNLT 339 (416)
T ss_dssp SSSCCEEEEEECSS-----------------SCCCCEE-ECTTCTTEEEECCSSSEEEEEESCCCC
T ss_pred CCCCccceeecCCC-----------------CceEEEE-ECCCCCCEEEEEecCCcEEEEEccCCC
Confidence 4 44 44443211 1234566 45666 778877778899999987654
No 192
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=80.77 E-value=43 Score=32.54 Aligned_cols=82 Identities=9% Similarity=0.081 Sum_probs=45.2
Q ss_pred CceEEEEcCCC-cEEEEECCCCeeEEEEcC-CCCcc---ccccCCCcC-------ccccCCcceEEEcCCCCEEEEECCC
Q 011014 84 EPFSVAVSPSG-ELLVLDSENNSRPKLVAG-SPEGY---YGHVDGRPR-------GARMNHPKGLAVDDRGNIYIADTMN 151 (495)
Q Consensus 84 ~P~GIAVd~dG-~LyVaDs~n~~ii~ivaG-s~~g~---~G~~dG~~~-------~a~f~~P~GIAVD~dGnIYVAD~~N 151 (495)
....++++++| +++++-.... .+++..- +..-. .....+... ......-..|+++++|.++++=..
T Consensus 228 ~v~~~~~~p~~~~~l~s~~~dg-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~- 305 (447)
T 3dw8_B 228 VITAAEFHPNSCNTFVYSSSKG-TIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY- 305 (447)
T ss_dssp CEEEEEECSSCTTEEEEEETTS-CEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-
T ss_pred ceEEEEECCCCCcEEEEEeCCC-eEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-
Confidence 46789999988 7766665554 4555432 11000 000000000 000014468999999997777666
Q ss_pred CEEEEEcCC--C--cEEEec
Q 011014 152 MAIRKISDT--G--VTTIAG 167 (495)
Q Consensus 152 ~rIrk~d~~--G--V~tiaG 167 (495)
+.|+.+|.. + +.++.+
T Consensus 306 ~~v~iwd~~~~~~~~~~~~~ 325 (447)
T 3dw8_B 306 LSVKVWDLNMENRPVETYQV 325 (447)
T ss_dssp SEEEEEETTCCSSCSCCEES
T ss_pred CeEEEEeCCCCccccceeec
Confidence 999999943 4 455533
No 193
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=80.23 E-value=46 Score=32.46 Aligned_cols=154 Identities=12% Similarity=0.083 Sum_probs=82.1
Q ss_pred CceEEEEcCCCcEEEEECCCCeeEEEEcCCCCccccccCCCcCccccCCcceEEEcCCCCEEEEECCCC----EEEEEcC
Q 011014 84 EPFSVAVSPSGELLVLDSENNSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMNM----AIRKISD 159 (495)
Q Consensus 84 ~P~GIAVd~dG~LyVaDs~n~~ii~ivaGs~~g~~G~~dG~~~~a~f~~P~GIAVD~dGnIYVAD~~N~----rIrk~d~ 159 (495)
.-.+|+++|||.++++-+.+. +..+..-+.......... ..-.....|++.++|..+++=...+ .|+.++.
T Consensus 178 ~V~~v~fspdg~~l~s~s~~~-~~~~~~~~~~~~~~~~~~----~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~ 252 (365)
T 4h5i_A 178 EVKDLHFSTDGKVVAYITGSS-LEVISTVTGSCIARKTDF----DKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISI 252 (365)
T ss_dssp CCCEEEECTTSSEEEEECSSC-EEEEETTTCCEEEEECCC----CTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEE
T ss_pred ceEEEEEccCCceEEecccee-EEEEEeccCcceeeeecC----CCCCCEEEEEEcCCCCEEEEEecCCcceeEEeeccc
Confidence 457899999999888877655 333332221110000000 0001234788999998666533222 4566663
Q ss_pred -CC-cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCceee--CCC-CCCcceEE
Q 011014 160 -TG-VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCSD--NYD-DTFHLGIF 234 (495)
Q Consensus 160 -~G-V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~gN~rI~~~d~~g~~~~~--~~~-~g~P~GIA 234 (495)
.+ ......... .+ ....-..|+ +.++|.++++-...+.|+.++.....+.. ..+ .+.-..++
T Consensus 253 ~~~~~~~~~~~~~---~~---------~~~~V~~~~-~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~ 319 (365)
T 4h5i_A 253 KSGNTSVLRSKQV---TN---------RFKGITSMD-VDMKGELAVLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVT 319 (365)
T ss_dssp ETTEEEEEEEEEE---ES---------SCSCEEEEE-ECTTSCEEEEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEE
T ss_pred ccceecceeeeee---cC---------CCCCeEeEE-ECCCCCceEEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEE
Confidence 22 111100000 00 011224566 57788887777777889999988766542 222 33346777
Q ss_pred EEecCcCeEEEEEccCCceEEEee
Q 011014 235 VLVAAAFFGYMLALLQRRVQAMFS 258 (495)
Q Consensus 235 vd~~a~~~~yv~d~~~~Rv~~~~~ 258 (495)
+.. .+...++....+-|+ ++.
T Consensus 320 fSp--dg~~laS~S~D~tvr-vw~ 340 (365)
T 4h5i_A 320 ISP--DSTYVASVSAANTIH-IIK 340 (365)
T ss_dssp ECT--TSCEEEEEETTSEEE-EEE
T ss_pred ECC--CCCEEEEEeCCCeEE-EEE
Confidence 775 455567777777773 443
No 194
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=80.11 E-value=28 Score=33.74 Aligned_cols=72 Identities=15% Similarity=0.147 Sum_probs=46.4
Q ss_pred CcceEEEcCCCCEEEEECCCCEEEEEcC-CC--cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECCC
Q 011014 132 HPKGLAVDDRGNIYIADTMNMAIRKISD-TG--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGN 208 (495)
Q Consensus 132 ~P~GIAVD~dGnIYVAD~~N~rIrk~d~-~G--V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~gN 208 (495)
....|+++++|+++++=..++.|+.++. ++ +.++.+.. ....+++ ..+++.++++-...
T Consensus 141 ~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~-----------------~~v~~~~-~~~~~~~l~s~~~d 202 (420)
T 3vl1_A 141 EITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHR-----------------ATVTDIA-IIDRGRNVLSASLD 202 (420)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCS-----------------SCEEEEE-EETTTTEEEEEETT
T ss_pred ccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCC-----------------CcEEEEE-EcCCCCEEEEEcCC
Confidence 4568999999997777777889999994 34 55553211 1234455 34455555555556
Q ss_pred CeEEEEECCCCce
Q 011014 209 QAIREIQLHDDDC 221 (495)
Q Consensus 209 ~rI~~~d~~g~~~ 221 (495)
+.|+.+++....+
T Consensus 203 ~~v~iwd~~~~~~ 215 (420)
T 3vl1_A 203 GTIRLWECGTGTT 215 (420)
T ss_dssp SCEEEEETTTTEE
T ss_pred CcEEEeECCCCce
Confidence 7788888766554
No 195
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=79.94 E-value=39 Score=31.50 Aligned_cols=101 Identities=12% Similarity=-0.038 Sum_probs=59.5
Q ss_pred cceEEEcCC----CCEEEEECCCCEEEEEcCC-C--cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECC-CCeEEEE
Q 011014 133 PKGLAVDDR----GNIYIADTMNMAIRKISDT-G--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGS-SCSLLVI 204 (495)
Q Consensus 133 P~GIAVD~d----GnIYVAD~~N~rIrk~d~~-G--V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~-~G~LyVa 204 (495)
...+++.++ |.++++=..++.|+.++.. + +.++.+.. ....++++ .+ ++.++++
T Consensus 72 v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~-----------------~~i~~~~~-~~~~~~~l~s 133 (366)
T 3k26_A 72 FYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHG-----------------NAINELKF-HPRDPNLLLS 133 (366)
T ss_dssp EEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCC-----------------SCEEEEEE-CSSCTTEEEE
T ss_pred EEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCC-----------------CcEEEEEE-CCCCCCEEEE
Confidence 457888887 5666666678899999943 4 44443211 12344553 44 6666666
Q ss_pred ECCCCeEEEEECCCCceeeC-----CCCCCcceEEEEecCcCeEEEEEccCCce
Q 011014 205 DRGNQAIREIQLHDDDCSDN-----YDDTFHLGIFVLVAAAFFGYMLALLQRRV 253 (495)
Q Consensus 205 D~gN~rI~~~d~~g~~~~~~-----~~~g~P~GIAvd~~a~~~~yv~d~~~~Rv 253 (495)
-...+.|+.++.....+... ...+....+++.. .+...++......|
T Consensus 134 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~dg~i 185 (366)
T 3k26_A 134 VSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDL--LGEKIMSCGMDHSL 185 (366)
T ss_dssp EETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECT--TSSEEEEEETTSCE
T ss_pred EeCCCeEEEEEeecCeEEEEecccccccCceeEEEECC--CCCEEEEecCCCCE
Confidence 55677888888776554321 2333456666665 33445555556666
No 196
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=79.88 E-value=42 Score=31.79 Aligned_cols=149 Identities=9% Similarity=0.087 Sum_probs=76.0
Q ss_pred ceEEEEcCCCcEEEEECCCCeeEEEEcC-CCC---ccccccCCCcCccccCCcceEEEcCCCCEEEEECCCCEEEEEcCC
Q 011014 85 PFSVAVSPSGELLVLDSENNSRPKLVAG-SPE---GYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMNMAIRKISDT 160 (495)
Q Consensus 85 P~GIAVd~dG~LyVaDs~n~~ii~ivaG-s~~---g~~G~~dG~~~~a~f~~P~GIAVD~dGnIYVAD~~N~rIrk~d~~ 160 (495)
-..+++.++|.++++-+... .+++..- +.. ...++ -..-..|++++++.++++=...+.|+.++..
T Consensus 68 v~~~~~s~dg~~l~s~s~D~-~v~~wd~~~~~~~~~~~~h---------~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~ 137 (319)
T 3frx_A 68 VQDCTLTADGAYALSASWDK-TLRLWDVATGETYQRFVGH---------KSDVMSVDIDKKASMIISGSRDKTIKVWTIK 137 (319)
T ss_dssp EEEEEECTTSSEEEEEETTS-EEEEEETTTTEEEEEEECC---------SSCEEEEEECTTSCEEEEEETTSCEEEEETT
T ss_pred EEEEEECCCCCEEEEEeCCC-EEEEEECCCCCeeEEEccC---------CCcEEEEEEcCCCCEEEEEeCCCeEEEEECC
Confidence 46788888888777765554 4555432 110 01111 1234588999999988888888899999966
Q ss_pred C--cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCceee--CCCCCCcceEEEE
Q 011014 161 G--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCSD--NYDDTFHLGIFVL 236 (495)
Q Consensus 161 G--V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~gN~rI~~~d~~g~~~~~--~~~~g~P~GIAvd 236 (495)
+ +.++.+... . .....+ .|..-. +.++.++++-...+.|+.+++....+.. ....+.-..+++.
T Consensus 138 ~~~~~~~~~h~~--------~-v~~~~~-~~~~~~--~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~s 205 (319)
T 3frx_A 138 GQCLATLLGHND--------W-VSQVRV-VPNEKA--DDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTAS 205 (319)
T ss_dssp SCEEEEECCCSS--------C-EEEEEE-CCC--------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEEC
T ss_pred CCeEEEEeccCC--------c-EEEEEE-ccCCCC--CCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEc
Confidence 6 444433110 0 000001 111111 1233455555566777777776654432 2222223445554
Q ss_pred ecCcCeEEEEEccCCceEEEee
Q 011014 237 VAAAFFGYMLALLQRRVQAMFS 258 (495)
Q Consensus 237 ~~a~~~~yv~d~~~~Rv~~~~~ 258 (495)
. .+...++......| +++.
T Consensus 206 p--~g~~l~s~~~dg~i-~iwd 224 (319)
T 3frx_A 206 P--DGTLIASAGKDGEI-MLWN 224 (319)
T ss_dssp T--TSSEEEEEETTCEE-EEEE
T ss_pred C--CCCEEEEEeCCCeE-EEEE
Confidence 3 33444455555555 3443
No 197
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=79.88 E-value=45 Score=32.20 Aligned_cols=150 Identities=7% Similarity=0.004 Sum_probs=78.9
Q ss_pred CceEEEEcCCCcEEEEECCCCeeEEEEcCCCCcccccc-CCCcCccccCCcceEEEcCCCCEEEEECCCCEEEEEcC-CC
Q 011014 84 EPFSVAVSPSGELLVLDSENNSRPKLVAGSPEGYYGHV-DGRPRGARMNHPKGLAVDDRGNIYIADTMNMAIRKISD-TG 161 (495)
Q Consensus 84 ~P~GIAVd~dG~LyVaDs~n~~ii~ivaGs~~g~~G~~-dG~~~~a~f~~P~GIAVD~dGnIYVAD~~N~rIrk~d~-~G 161 (495)
.-..+++.++|.++++-..++ .+.+..-......+.. ........-..-..+++.+++..+++=...+.|+.+|. .+
T Consensus 108 ~v~~~~~sp~g~~lasg~~d~-~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~ 186 (354)
T 2pbi_B 108 WVMACAYAPSGCAIACGGLDN-KCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESG 186 (354)
T ss_dssp CCCEEEECTTSSEEEEESTTS-EEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTC
T ss_pred CEEEEEECCCCCEEEEeeCCC-CEEEEEEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCC
Confidence 356889999999888877666 4444421110000000 00000011123457889998887777777899999994 44
Q ss_pred --cEEEecCcccCCCCCCCCCCcCcccCCCceEEEE-CCCCeEEEEECCCCeEEEEECCCCceee--CCCCCCcceEEEE
Q 011014 162 --VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYV-GSSCSLLVIDRGNQAIREIQLHDDDCSD--NYDDTFHLGIFVL 236 (495)
Q Consensus 162 --V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~v-d~~G~LyVaD~gN~rI~~~d~~g~~~~~--~~~~g~P~GIAvd 236 (495)
+.++.+... .-..+++. +.+|+++++-...+.|+.+++....+.. ....+.-..+++.
T Consensus 187 ~~~~~~~~h~~-----------------~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~ 249 (354)
T 2pbi_B 187 QLLQSFHGHGA-----------------DVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYY 249 (354)
T ss_dssp CEEEEEECCSS-----------------CEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEEC
T ss_pred eEEEEEcCCCC-----------------CeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEe
Confidence 455533110 11223321 2245555555566777777776655432 1222223455555
Q ss_pred ecCcCeEEEEEccCCce
Q 011014 237 VAAAFFGYMLALLQRRV 253 (495)
Q Consensus 237 ~~a~~~~yv~d~~~~Rv 253 (495)
. .+...++......|
T Consensus 250 p--~~~~l~s~s~D~~v 264 (354)
T 2pbi_B 250 P--SGDAFASGSDDATC 264 (354)
T ss_dssp T--TSSEEEEEETTSCE
T ss_pred C--CCCEEEEEeCCCeE
Confidence 4 33455666666666
No 198
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=79.86 E-value=48 Score=32.45 Aligned_cols=106 Identities=16% Similarity=0.120 Sum_probs=62.4
Q ss_pred cceEEEcCCCCEEEEECCCCEEEEEcCC-C--cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECCCC
Q 011014 133 PKGLAVDDRGNIYIADTMNMAIRKISDT-G--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQ 209 (495)
Q Consensus 133 P~GIAVD~dGnIYVAD~~N~rIrk~d~~-G--V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~gN~ 209 (495)
-..|++.++|+++++-...+.|+++|.. + +.++.+.. ..-..++ ..+++..+++-...+
T Consensus 126 v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~-----------------~~v~~~~-~~p~~~~l~s~s~d~ 187 (393)
T 1erj_A 126 IRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHE-----------------QDIYSLD-YFPSGDKLVSGSGDR 187 (393)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCS-----------------SCEEEEE-ECTTSSEEEEEETTS
T ss_pred EEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEccCC-----------------CCEEEEE-EcCCCCEEEEecCCC
Confidence 3589999999988887778999999954 3 33442210 1223555 456666666666778
Q ss_pred eEEEEECCCCceee-CCCCCCcceEEEEecCcCeEEEEEccCCceEEEee
Q 011014 210 AIREIQLHDDDCSD-NYDDTFHLGIFVLVAAAFFGYMLALLQRRVQAMFS 258 (495)
Q Consensus 210 rI~~~d~~g~~~~~-~~~~g~P~GIAvd~~a~~~~yv~d~~~~Rv~~~~~ 258 (495)
.|+.+++....+.. .........+++... .+...++....+.| .++.
T Consensus 188 ~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~-~~~~l~~~s~d~~v-~iwd 235 (393)
T 1erj_A 188 TVRIWDLRTGQCSLTLSIEDGVTTVAVSPG-DGKYIAAGSLDRAV-RVWD 235 (393)
T ss_dssp EEEEEETTTTEEEEEEECSSCEEEEEECST-TCCEEEEEETTSCE-EEEE
T ss_pred cEEEEECCCCeeEEEEEcCCCcEEEEEECC-CCCEEEEEcCCCcE-EEEE
Confidence 88888887766543 112222344444431 23445555555556 3443
No 199
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=79.40 E-value=40 Score=32.19 Aligned_cols=78 Identities=12% Similarity=0.099 Sum_probs=46.5
Q ss_pred CCcceEEEcCCCCEEEEECCCCEEEEEcCC-C--cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECC
Q 011014 131 NHPKGLAVDDRGNIYIADTMNMAIRKISDT-G--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRG 207 (495)
Q Consensus 131 ~~P~GIAVD~dGnIYVAD~~N~rIrk~d~~-G--V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~g 207 (495)
.....|+++++| ++++-..++.|+.++.. + +.++.+.. +.. ..-.....++ ..+++.++++-..
T Consensus 187 ~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-----~h~------~~~~~i~~i~-~~~~~~~l~~~~~ 253 (397)
T 1sq9_A 187 QFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQH-----SMI------NNSNSIRSVK-FSPQGSLLAIAHD 253 (397)
T ss_dssp CCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC--------------CCCCCEEEEE-ECSSTTEEEEEEE
T ss_pred CCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEeccc-----ccc------ccCCccceEE-ECCCCCEEEEEec
Confidence 346799999999 88888888999999954 4 44442200 000 0011234555 4555665555545
Q ss_pred C---CeEEEEECCCCce
Q 011014 208 N---QAIREIQLHDDDC 221 (495)
Q Consensus 208 N---~rI~~~d~~g~~~ 221 (495)
+ +.|+.+++....+
T Consensus 254 d~~~g~i~i~d~~~~~~ 270 (397)
T 1sq9_A 254 SNSFGCITLYETEFGER 270 (397)
T ss_dssp ETTEEEEEEEETTTCCE
T ss_pred CCCCceEEEEECCCCcc
Confidence 5 6788888765443
No 200
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=79.22 E-value=15 Score=35.22 Aligned_cols=111 Identities=9% Similarity=-0.038 Sum_probs=60.9
Q ss_pred CceEEEEcCCCcEEEEECCCCeeEEEEcCCCCc---cccccCCCcCccccCCcceEEEcCCCCEEEEECCCCEEEEEcCC
Q 011014 84 EPFSVAVSPSGELLVLDSENNSRPKLVAGSPEG---YYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMNMAIRKISDT 160 (495)
Q Consensus 84 ~P~GIAVd~dG~LyVaDs~n~~ii~ivaGs~~g---~~G~~dG~~~~a~f~~P~GIAVD~dGnIYVAD~~N~rIrk~d~~ 160 (495)
.-..|++.++|+++++-+.+. .+++..-.... ...... ..-.....|++.++|+++++=..++.|+.++-+
T Consensus 57 ~v~~~~~s~~~~~l~s~s~d~-~v~vwd~~~~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~ 130 (377)
T 3dwl_C 57 IVTCVDWAPKSNRIVTCSQDR-NAYVYEKRPDGTWKQTLVLL-----RLNRAATFVRWSPNEDKFAVGSGARVISVCYFE 130 (377)
T ss_dssp CEEEEEECTTTCCEEEEETTS-SEEEC------CCCCEEECC-----CCSSCEEEEECCTTSSCCEEEESSSCEEECCC-
T ss_pred eEEEEEEeCCCCEEEEEeCCC-eEEEEEcCCCCceeeeeEec-----ccCCceEEEEECCCCCEEEEEecCCeEEEEEEC
Confidence 457888999888666654443 34443211100 000000 011234588999998866666667889888843
Q ss_pred C------cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECCCCeEEEEECC
Q 011014 161 G------VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLH 217 (495)
Q Consensus 161 G------V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~gN~rI~~~d~~ 217 (495)
. +..+.+. .-.....++ ..+++.++++-...+.|+.++..
T Consensus 131 ~~~~~~~~~~~~~~----------------h~~~v~~~~-~~~~~~~l~~~~~d~~i~iwd~~ 176 (377)
T 3dwl_C 131 QENDWWVSKHLKRP----------------LRSTILSLD-WHPNNVLLAAGCADRKAYVLSAY 176 (377)
T ss_dssp ----CCCCEEECSS----------------CCSCEEEEE-ECTTSSEEEEEESSSCEEEEEEC
T ss_pred CcccceeeeEeecc----------------cCCCeEEEE-EcCCCCEEEEEeCCCEEEEEEEE
Confidence 3 2333210 011334566 46677776666667888888875
No 201
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=77.87 E-value=58 Score=32.34 Aligned_cols=147 Identities=6% Similarity=-0.049 Sum_probs=74.2
Q ss_pred CceEEEEcCC---CcEEEEECCCCeeEEEEc-CCCCccccccCCCcCccccCCcceEEEcCCCCEEEEECCCCEEEEEc-
Q 011014 84 EPFSVAVSPS---GELLVLDSENNSRPKLVA-GSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMNMAIRKIS- 158 (495)
Q Consensus 84 ~P~GIAVd~d---G~LyVaDs~n~~ii~iva-Gs~~g~~G~~dG~~~~a~f~~P~GIAVD~dGnIYVAD~~N~rIrk~d- 158 (495)
....|+++++ |.++++-.... .+++.. .+..-......+ .-.....|++. +|+++++=...+.|+.+|
T Consensus 197 ~v~~~~~sp~~~~~~~l~s~~~d~-~i~vwd~~~~~~~~~~~~~-----h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~ 269 (450)
T 2vdu_B 197 MLTDVHLIKDSDGHQFIITSDRDE-HIKISHYPQCFIVDKWLFG-----HKHFVSSICCG-KDYLLLSAGGDDKIFAWDW 269 (450)
T ss_dssp CEEEEEEEECTTSCEEEEEEETTS-CEEEEEESCTTCEEEECCC-----CSSCEEEEEEC-STTEEEEEESSSEEEEEET
T ss_pred ceEEEEEcCCCCCCcEEEEEcCCC-cEEEEECCCCceeeeeecC-----CCCceEEEEEC-CCCEEEEEeCCCeEEEEEC
Confidence 4577889988 86655544433 344432 111000000001 12345689999 999888877889999999
Q ss_pred CCC--cEEEecCcccCCCCCC--------CCCCcCcccCCCceEEEECCCCeEEEEECCCCeEEEEEC--CCC---ce-e
Q 011014 159 DTG--VTTIAGGKWSRGVGHV--------DGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQL--HDD---DC-S 222 (495)
Q Consensus 159 ~~G--V~tiaGg~~G~~~g~~--------dG~~~~a~f~~P~gVa~vd~~G~LyVaD~gN~rI~~~d~--~g~---~~-~ 222 (495)
..| +.++.........-.. ........-....+|++......|+++....+.|+.++. ... .+ .
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~ 349 (450)
T 2vdu_B 270 KTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEMSEKQKGDLALKQ 349 (450)
T ss_dssp TTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEECSSSTTCEEEEE
T ss_pred CCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEeccCCCCceeecc
Confidence 444 4444321100000000 000000011123456644444456677667889999988 332 11 2
Q ss_pred eCCCCCCcceEEEEe
Q 011014 223 DNYDDTFHLGIFVLV 237 (495)
Q Consensus 223 ~~~~~g~P~GIAvd~ 237 (495)
.....+.+..+++..
T Consensus 350 ~~~~~~~v~~~~~~~ 364 (450)
T 2vdu_B 350 IITFPYNVISLSAHN 364 (450)
T ss_dssp EEECSSCEEEEEEET
T ss_pred EeccCCceEEEEecC
Confidence 222235677777775
No 202
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=77.83 E-value=29 Score=34.49 Aligned_cols=112 Identities=11% Similarity=0.059 Sum_probs=62.8
Q ss_pred ceEEEEcC-CCcEEEEECCCCeeEEEEcCCC--CccccccCCCcCccccCCcceEEEcCCCCEEEEECCCCEEEEEcCCC
Q 011014 85 PFSVAVSP-SGELLVLDSENNSRPKLVAGSP--EGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMNMAIRKISDTG 161 (495)
Q Consensus 85 P~GIAVd~-dG~LyVaDs~n~~ii~ivaGs~--~g~~G~~dG~~~~a~f~~P~GIAVD~dGnIYVAD~~N~rIrk~d~~G 161 (495)
-.+|++.| +|+++++-+... .+++..-.. ......... .-..-..++++++|+++++=..++.|+.+|.++
T Consensus 167 V~~l~f~p~~~~~l~s~s~D~-~v~iwd~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~ 240 (435)
T 4e54_B 167 ITGLKFNPLNTNQFYASSMEG-TTRLQDFKGNILRVFASSDT-----INIWFCSLDVSASSRMVVTGDNVGNVILLNMDG 240 (435)
T ss_dssp CCEEEECSSCTTEEEEECSSS-CEEEEETTSCEEEEEECCSS-----CSCCCCCEEEETTTTEEEEECSSSBEEEEESSS
T ss_pred EEEEEEeCCCCCEEEEEeCCC-EEEEeeccCCceeEEeccCC-----CCccEEEEEECCCCCEEEEEeCCCcEeeeccCc
Confidence 46888886 677777766554 444443211 000100000 111234789999999888877788999999766
Q ss_pred --cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCC-eEEEEECCCCeEEEEECCCCc
Q 011014 162 --VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSC-SLLVIDRGNQAIREIQLHDDD 220 (495)
Q Consensus 162 --V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G-~LyVaD~gN~rI~~~d~~g~~ 220 (495)
+.++.+- -..-.+|+ ..+++ .++++-...+.|+.+++....
T Consensus 241 ~~~~~~~~h-----------------~~~v~~v~-~~p~~~~~~~s~s~d~~v~iwd~~~~~ 284 (435)
T 4e54_B 241 KELWNLRMH-----------------KKKVTHVA-LNPCCDWFLATASVDQTVKIWDLRQVR 284 (435)
T ss_dssp CBCCCSBCC-----------------SSCEEEEE-ECTTCSSEEEEEETTSBCCEEETTTCC
T ss_pred ceeEEEecc-----------------cceEEeee-ecCCCceEEEEecCcceeeEEeccccc
Confidence 2222110 01123455 34443 466665566778888876533
No 203
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=77.83 E-value=68 Score=34.07 Aligned_cols=133 Identities=14% Similarity=0.091 Sum_probs=72.0
Q ss_pred CceEEEEcCCCcEEEEECCCCeeEEEEcCCCCccccccCCCcCccccCCcceEEEcCCC--CEEEEECCCCEEEEEcCCC
Q 011014 84 EPFSVAVSPSGELLVLDSENNSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRG--NIYIADTMNMAIRKISDTG 161 (495)
Q Consensus 84 ~P~GIAVd~dG~LyVaDs~n~~ii~ivaGs~~g~~G~~dG~~~~a~f~~P~GIAVD~dG--nIYVAD~~N~rIrk~d~~G 161 (495)
.-..|+++++|..+++-+... .+++..-........... ....-..-..+++.+++ .++++=...+.|+++|...
T Consensus 474 ~v~~~~~s~~~~~l~s~s~D~-~i~iwd~~~~~~~~~~~~--~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~ 550 (694)
T 3dm0_A 474 DVLSVAFSLDNRQIVSASRDR-TIKLWNTLGECKYTISEG--GEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSN 550 (694)
T ss_dssp CEEEEEECTTSSCEEEEETTS-CEEEECTTSCEEEEECSS--TTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTT
T ss_pred CEEEEEEeCCCCEEEEEeCCC-EEEEEECCCCcceeeccC--CCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCC
Confidence 346778888887666655444 445543211000000000 00111223578888876 4666666678899998443
Q ss_pred ---cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCceeeC-CCCCCcceEEEEe
Q 011014 162 ---VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCSDN-YDDTFHLGIFVLV 237 (495)
Q Consensus 162 ---V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~gN~rI~~~d~~g~~~~~~-~~~g~P~GIAvd~ 237 (495)
+.++.+.. ..-..|+ ..++|.++++-...+.|+.+++....+... .....-..+++..
T Consensus 551 ~~~~~~~~~h~-----------------~~v~~v~-~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp 612 (694)
T 3dm0_A 551 CKLRSTLAGHT-----------------GYVSTVA-VSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEANSVIHALCFSP 612 (694)
T ss_dssp CCEEEEECCCS-----------------SCEEEEE-ECTTSSEEEEEETTSBCEEEETTTTEEEECCBCSSCEEEEEECS
T ss_pred CcEEEEEcCCC-----------------CCEEEEE-EeCCCCEEEEEeCCCeEEEEECCCCceEEEecCCCcEEEEEEcC
Confidence 34442210 1234556 577788888777788899999877665432 2222334455543
No 204
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=76.75 E-value=61 Score=31.96 Aligned_cols=71 Identities=18% Similarity=0.136 Sum_probs=42.9
Q ss_pred CcceEEEcCCCCEEEEECCCCEEEEEcC-CC--cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECCC
Q 011014 132 HPKGLAVDDRGNIYIADTMNMAIRKISD-TG--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGN 208 (495)
Q Consensus 132 ~P~GIAVD~dGnIYVAD~~N~rIrk~d~-~G--V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~gN 208 (495)
....++++++|+.+++-..++.|+.+|. +| +.++.+.. .....++ .+ +..+++-...
T Consensus 312 ~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~-----------------~~v~~~~-~~--~~~l~s~s~d 371 (464)
T 3v7d_B 312 RIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHT-----------------ALVGLLR-LS--DKFLVSAAAD 371 (464)
T ss_dssp CEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECCCS-----------------SCEEEEE-EC--SSEEEEEETT
T ss_pred CEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeCCC-----------------CcEEEEE-Ec--CCEEEEEeCC
Confidence 3458999999998888778899999994 45 44442211 0112333 22 3444444455
Q ss_pred CeEEEEECCCCcee
Q 011014 209 QAIREIQLHDDDCS 222 (495)
Q Consensus 209 ~rI~~~d~~g~~~~ 222 (495)
+.|+.+++......
T Consensus 372 g~v~vwd~~~~~~~ 385 (464)
T 3v7d_B 372 GSIRGWDANDYSRK 385 (464)
T ss_dssp SEEEEEETTTCCEE
T ss_pred CcEEEEECCCCcee
Confidence 67777777664443
No 205
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=76.00 E-value=51 Score=30.69 Aligned_cols=116 Identities=10% Similarity=0.068 Sum_probs=64.7
Q ss_pred CceEEEEcCC----CcEEEEECCCCeeEEEEcCCCCccccccCCCcCccccCCcceEEEcC-CCCEEEEECCCCEEEEEc
Q 011014 84 EPFSVAVSPS----GELLVLDSENNSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDD-RGNIYIADTMNMAIRKIS 158 (495)
Q Consensus 84 ~P~GIAVd~d----G~LyVaDs~n~~ii~ivaGs~~g~~G~~dG~~~~a~f~~P~GIAVD~-dGnIYVAD~~N~rIrk~d 158 (495)
.-..+++.++ |.++++-..+. .+++..-..........+ .-.....|++.+ +++++++=..++.|+.++
T Consensus 71 ~v~~~~~~~~~~~~~~~l~~~~~dg-~i~v~d~~~~~~~~~~~~-----~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd 144 (366)
T 3k26_A 71 NFYTCAWTYDSNTSHPLLAVAGSRG-IIRIINPITMQCIKHYVG-----HGNAINELKFHPRDPNLLLSVSKDHALRLWN 144 (366)
T ss_dssp CEEEEEEEECTTTCCEEEEEEETTC-EEEEECTTTCCEEEEEES-----CCSCEEEEEECSSCTTEEEEEETTSCEEEEE
T ss_pred cEEEEEeccCCCCCCCEEEEecCCC-EEEEEEchhceEeeeecC-----CCCcEEEEEECCCCCCEEEEEeCCCeEEEEE
Confidence 4566777766 55555544444 455553211000000000 112356899998 888777777788999999
Q ss_pred CC-C--cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCc
Q 011014 159 DT-G--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDD 220 (495)
Q Consensus 159 ~~-G--V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~gN~rI~~~d~~g~~ 220 (495)
.. + +..+... .+ .-....+++ ..+++.++++-..++.|+.+++....
T Consensus 145 ~~~~~~~~~~~~~-~~-------------~~~~v~~~~-~~~~~~~l~~~~~dg~i~i~d~~~~~ 194 (366)
T 3k26_A 145 IQTDTLVAIFGGV-EG-------------HRDEVLSAD-YDLLGEKIMSCGMDHSLKLWRINSKR 194 (366)
T ss_dssp TTTTEEEEEECST-TS-------------CSSCEEEEE-ECTTSSEEEEEETTSCEEEEESCSHH
T ss_pred eecCeEEEEeccc-cc-------------ccCceeEEE-ECCCCCEEEEecCCCCEEEEECCCCc
Confidence 43 4 3333110 00 112345666 46677666666667899999987643
No 206
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=75.15 E-value=69 Score=31.86 Aligned_cols=116 Identities=16% Similarity=0.107 Sum_probs=58.3
Q ss_pred CceEEEEcCCCc-EEEEEC-CCCeeEEEEcCCCCccccccCCCcCccccCCcceEEEcCCCC-EEEEEC--CCCEEEEEc
Q 011014 84 EPFSVAVSPSGE-LLVLDS-ENNSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGN-IYIADT--MNMAIRKIS 158 (495)
Q Consensus 84 ~P~GIAVd~dG~-LyVaDs-~n~~ii~ivaGs~~g~~G~~dG~~~~a~f~~P~GIAVD~dGn-IYVAD~--~N~rIrk~d 158 (495)
....++++|||. |+++.. .....+.++.-.. +..-...+ .-.....++++++|+ |+++-. +..+|++++
T Consensus 224 ~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~-~~~~~l~~-----~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d 297 (415)
T 2hqs_A 224 HNGAPAFSPDGSKLAFALSKTGSLNLYVMDLAS-GQIRQVTD-----GRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVN 297 (415)
T ss_dssp CEEEEEECTTSSEEEEEECTTSSCEEEEEETTT-CCEEECCC-----CSSCEEEEEECTTSSEEEEEECTTSSCEEEEEE
T ss_pred cccCEEEcCCCCEEEEEEecCCCceEEEEECCC-CCEEeCcC-----CCCcccceEECCCCCEEEEEECCCCCcEEEEEE
Confidence 456888899887 543443 2222344443211 11000000 012345789999998 444432 344888888
Q ss_pred CCC--cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCe-EEEEECC--CCeEEEEECCCCceee
Q 011014 159 DTG--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCS-LLVIDRG--NQAIREIQLHDDDCSD 223 (495)
Q Consensus 159 ~~G--V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~-LyVaD~g--N~rI~~~d~~g~~~~~ 223 (495)
.++ +..+.... .....++ ..++|. |+++... ...|+.+++++..+..
T Consensus 298 ~~~~~~~~l~~~~-----------------~~~~~~~-~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~~ 349 (415)
T 2hqs_A 298 INGGAPQRITWEG-----------------SQNQDAD-VSSDGKFMVMVSSNGGQQHIAKQDLATGGVQV 349 (415)
T ss_dssp TTSSCCEECCCSS-----------------SEEEEEE-ECTTSSEEEEEEECSSCEEEEEEETTTCCEEE
T ss_pred CCCCCEEEEecCC-----------------CcccCeE-ECCCCCEEEEEECcCCceEEEEEECCCCCEEE
Confidence 554 33332110 0122445 345554 4444432 4578888887766544
No 207
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=74.63 E-value=22 Score=37.41 Aligned_cols=121 Identities=12% Similarity=0.156 Sum_probs=68.7
Q ss_pred CceEEEEcCCCc-EEEEECCCCeeEEEEcCCCCccccccCCCcCccccCCcceEEEcCCCCEEEEECCCCEEEEEc-CCC
Q 011014 84 EPFSVAVSPSGE-LLVLDSENNSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMNMAIRKIS-DTG 161 (495)
Q Consensus 84 ~P~GIAVd~dG~-LyVaDs~n~~ii~ivaGs~~g~~G~~dG~~~~a~f~~P~GIAVD~dGnIYVAD~~N~rIrk~d-~~G 161 (495)
.-..|++.+++. ++++-+... .+++.............+ .-..-..|++.++|+++++=...+.|+.++ .+|
T Consensus 149 ~v~~v~f~p~~~~~l~s~s~D~-~v~lwd~~~~~~~~~l~~-----H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g 222 (611)
T 1nr0_A 149 AMNSVDFKPSRPFRIISGSDDN-TVAIFEGPPFKFKSTFGE-----HTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDG 222 (611)
T ss_dssp CEEEEEECSSSSCEEEEEETTS-CEEEEETTTBEEEEEECC-----CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTC
T ss_pred CceEEEECCCCCeEEEEEeCCC-eEEEEECCCCeEeeeecc-----ccCceEEEEECCCCCEEEEEECCCcEEEEECCCC
Confidence 356788888875 455544444 455554322100000011 112345899999999998888889999999 445
Q ss_pred --cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCce
Q 011014 162 --VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDC 221 (495)
Q Consensus 162 --V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~gN~rI~~~d~~g~~~ 221 (495)
+.++...... ..+.-....+|+ ..++|.++++-...+.|+.++.....+
T Consensus 223 ~~~~~~~~~~~~----------~~~h~~~V~~v~-~spdg~~l~s~s~D~~v~lWd~~~~~~ 273 (611)
T 1nr0_A 223 TKTGVFEDDSLK----------NVAHSGSVFGLT-WSPDGTKIASASADKTIKIWNVATLKV 273 (611)
T ss_dssp CEEEECBCTTSS----------SCSSSSCEEEEE-ECTTSSEEEEEETTSEEEEEETTTTEE
T ss_pred cEeeeecccccc----------ccccCCCEEEEE-ECCCCCEEEEEeCCCeEEEEeCCCCce
Confidence 3333110000 000112345566 567777777766778888888876544
No 208
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=74.52 E-value=45 Score=31.02 Aligned_cols=114 Identities=10% Similarity=0.082 Sum_probs=61.9
Q ss_pred CceEEEEcCC---CcEEEEECCCCeeEEEEcCC--CCccccccCCCcCccccCCcceEEEcCCCCEEEEECCCCEEEEEc
Q 011014 84 EPFSVAVSPS---GELLVLDSENNSRPKLVAGS--PEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMNMAIRKIS 158 (495)
Q Consensus 84 ~P~GIAVd~d---G~LyVaDs~n~~ii~ivaGs--~~g~~G~~dG~~~~a~f~~P~GIAVD~dGnIYVAD~~N~rIrk~d 158 (495)
.-..|+++++ |+++++-..+. .+++..-. ......... ..-.....|++.++|+++++=..++.|+.++
T Consensus 41 ~v~~~~~~~~~~~g~~l~~~~~dg-~i~iw~~~~~~~~~~~~~~-----~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd 114 (368)
T 3mmy_A 41 SIGCLSFSPPTLPGNFLIAGSWAN-DVRCWEVQDSGQTIPKAQQ-----MHTGPVLDVCWSDDGSKVFTASCDKTAKMWD 114 (368)
T ss_dssp CEEEEEECCTTSSSEEEEEEETTS-EEEEEEECTTSCEEEEEEE-----ECSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred ceEEEEEcCCCCCceEEEEECCCC-cEEEEEcCCCCceeEEEec-----cccCCEEEEEECcCCCEEEEEcCCCcEEEEE
Confidence 4567888887 56666554444 34443211 100000000 0112346899999998777766788999999
Q ss_pred CCC--cEEEecCcccCCCCCCCCCCcCcccCCCceEEEE-CCCCeEEEEECCCCeEEEEECCCCc
Q 011014 159 DTG--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYV-GSSCSLLVIDRGNQAIREIQLHDDD 220 (495)
Q Consensus 159 ~~G--V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~v-d~~G~LyVaD~gN~rI~~~d~~g~~ 220 (495)
.+. ...+.+.. .....+++. ..++.++++-..++.|+.+++....
T Consensus 115 ~~~~~~~~~~~~~-----------------~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~ 162 (368)
T 3mmy_A 115 LSSNQAIQIAQHD-----------------APVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSN 162 (368)
T ss_dssp TTTTEEEEEEECS-----------------SCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSS
T ss_pred cCCCCceeecccc-----------------CceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCc
Confidence 544 22222110 122344421 5666666666666778888876544
No 209
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=73.86 E-value=80 Score=31.99 Aligned_cols=105 Identities=6% Similarity=-0.104 Sum_probs=61.3
Q ss_pred CcceEEEcCCCCEEEEECCCCEEEEEcCCCcEEEecCcccCCCCCCCCCCcCcccCCCceEEEECC----------CCeE
Q 011014 132 HPKGLAVDDRGNIYIADTMNMAIRKISDTGVTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGS----------SCSL 201 (495)
Q Consensus 132 ~P~GIAVD~dGnIYVAD~~N~rIrk~d~~GV~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~----------~G~L 201 (495)
....++++++|+++++=..++.|+.++...-..+.-. .+. .-.....++ ..+ ++.+
T Consensus 490 ~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~-----~~~--------h~~~v~~~~-~sp~~~~~~~~~~~~~~ 555 (615)
T 1pgu_A 490 KPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSR-----WAF--------RTSKINAIS-WKPAEKGANEEEIEEDL 555 (615)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECC-----SCC--------CSSCEEEEE-ECCCC------CCSCCE
T ss_pred ceEEEEECCCCCEEEEcCCCCeEEEeeCCCCcceeEe-----ecC--------CCCceeEEE-EcCccccccccccCCCE
Confidence 4568899999987777777888999995331222110 000 011334556 455 6777
Q ss_pred EEEECCCCeEEEEECCCC-c-eeeC-CCCCCcceEEEEecCcCeEEEEEccCCce
Q 011014 202 LVIDRGNQAIREIQLHDD-D-CSDN-YDDTFHLGIFVLVAAAFFGYMLALLQRRV 253 (495)
Q Consensus 202 yVaD~gN~rI~~~d~~g~-~-~~~~-~~~g~P~GIAvd~~a~~~~yv~d~~~~Rv 253 (495)
+++-...+.|+.++.... . +... ...+.-..+++.. .+. .++......|
T Consensus 556 l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~l~~s~--~~~-l~s~~~d~~v 607 (615)
T 1pgu_A 556 VATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWET--PST-LVSSGADACI 607 (615)
T ss_dssp EEEEETTSCEEEEESSCTTCCEEETTSSTTCEEEEEEEE--TTE-EEEEETTSCE
T ss_pred EEEEcCCCcEEEEECCCCceechhhhcCccceEEEEEcC--CCC-eEEecCCceE
Confidence 777667789999998774 2 3332 2233456677775 334 4555555555
No 210
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=73.25 E-value=52 Score=29.90 Aligned_cols=111 Identities=15% Similarity=0.138 Sum_probs=60.4
Q ss_pred CceEEEEcCCCcEEEEECCCCeeEEEEcCCCCccccccCCCcCccccCCcceEEEcCCCCEEEEECCCCEEEEEc-CCC-
Q 011014 84 EPFSVAVSPSGELLVLDSENNSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMNMAIRKIS-DTG- 161 (495)
Q Consensus 84 ~P~GIAVd~dG~LyVaDs~n~~ii~ivaGs~~g~~G~~dG~~~~a~f~~P~GIAVD~dGnIYVAD~~N~rIrk~d-~~G- 161 (495)
....+++.++|.++++...+ .+.++.-..........+ .-.....|+++++|.|+.+. .++.|+.++ .++
T Consensus 186 ~i~~~~~~~~~~~~~~~~dg--~i~i~d~~~~~~~~~~~~-----~~~~i~~~~~~~~~~l~~~~-~dg~v~iwd~~~~~ 257 (313)
T 3odt_A 186 VVRHLAVVDDGHFISCSNDG--LIKLVDMHTGDVLRTYEG-----HESFVYCIKLLPNGDIVSCG-EDRTVRIWSKENGS 257 (313)
T ss_dssp CEEEEEEEETTEEEEEETTS--EEEEEETTTCCEEEEEEC-----CSSCEEEEEECTTSCEEEEE-TTSEEEEECTTTCC
T ss_pred cEEEEEEcCCCeEEEccCCC--eEEEEECCchhhhhhhhc-----CCceEEEEEEecCCCEEEEe-cCCEEEEEECCCCc
Confidence 45678888887755444333 344443211000000000 11235689999988766554 478899999 444
Q ss_pred -cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCce
Q 011014 162 -VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDC 221 (495)
Q Consensus 162 -V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~gN~rI~~~d~~g~~~ 221 (495)
+.++.+.. .....++ ..+++.++++. ..+.|+.+++....+
T Consensus 258 ~~~~~~~~~-----------------~~i~~~~-~~~~~~~~~~~-~dg~i~iw~~~~~~~ 299 (313)
T 3odt_A 258 LKQVITLPA-----------------ISIWSVD-CMSNGDIIVGS-SDNLVRIFSQEKSRW 299 (313)
T ss_dssp EEEEEECSS-----------------SCEEEEE-ECTTSCEEEEE-TTSCEEEEESCGGGC
T ss_pred eeEEEeccC-----------------ceEEEEE-EccCCCEEEEe-CCCcEEEEeCCCCce
Confidence 34442210 1234555 46677755544 467888888776544
No 211
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=72.55 E-value=19 Score=34.48 Aligned_cols=159 Identities=9% Similarity=-0.062 Sum_probs=76.8
Q ss_pred CceEEEEcCCCcEEEEECCCCeeEEEEcCCCCc---cccccCCCcCccccCCcceEEEcCCCCEEEEECCCCEEEEEcCC
Q 011014 84 EPFSVAVSPSGELLVLDSENNSRPKLVAGSPEG---YYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMNMAIRKISDT 160 (495)
Q Consensus 84 ~P~GIAVd~dG~LyVaDs~n~~ii~ivaGs~~g---~~G~~dG~~~~a~f~~P~GIAVD~dGnIYVAD~~N~rIrk~d~~ 160 (495)
....+++.++|+++++-..+. .+++..-.... ......+ ..-.....|+++++|+++++=..++.|+.++..
T Consensus 102 ~v~~~~~~~~~~~l~~~~~d~-~i~iwd~~~~~~~~~~~~~~~----~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~ 176 (377)
T 3dwl_C 102 AATFVRWSPNEDKFAVGSGAR-VISVCYFEQENDWWVSKHLKR----PLRSTILSLDWHPNNVLLAAGCADRKAYVLSAY 176 (377)
T ss_dssp CEEEEECCTTSSCCEEEESSS-CEEECCC-----CCCCEEECS----SCCSCEEEEEECTTSSEEEEEESSSCEEEEEEC
T ss_pred ceEEEEECCCCCEEEEEecCC-eEEEEEECCcccceeeeEeec----ccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEE
Confidence 456788888887655544443 34443211100 0000000 011235689999999987776677888888842
Q ss_pred C--cEEE-ecCcccCCCCCCCC-C-CcCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCce----e-e-CCCCCC
Q 011014 161 G--VTTI-AGGKWSRGVGHVDG-P-SEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDC----S-D-NYDDTF 229 (495)
Q Consensus 161 G--V~ti-aGg~~G~~~g~~dG-~-~~~a~f~~P~gVa~vd~~G~LyVaD~gN~rI~~~d~~g~~~----~-~-~~~~g~ 229 (495)
. +... .....+.. ...+ . .....-.....++ ..+++.++++-..++.|+.++.....+ . . ....+.
T Consensus 177 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~v~~~~-~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~ 253 (377)
T 3dwl_C 177 VRDVDAKPEASVWGSR--LPFNTVCAEYPSGGWVHAVG-FSPSGNALAYAGHDSSVTIAYPSAPEQPPRALITVKLSQLP 253 (377)
T ss_dssp CSSCC-CCCSCSSCSC--CCEEEEEECCCCSSSEEEEE-ECTTSSCEEEEETTTEEC-CEECSTTSCEEECCCEECSSSC
T ss_pred ecccCCCccccccccc--cchhhhhhcccCCceEEEEE-ECCCCCEEEEEeCCCcEEEEECCCCCCcceeeEeecCCCCc
Confidence 1 1000 00000000 0000 0 0000111234566 567777666666778999999887654 2 1 222233
Q ss_pred cceEEEEecCcCeEEEEEccCCce
Q 011014 230 HLGIFVLVAAAFFGYMLALLQRRV 253 (495)
Q Consensus 230 P~GIAvd~~a~~~~yv~d~~~~Rv 253 (495)
-..+++.. .+.+.++. ...++
T Consensus 254 v~~~~~s~--~~~~l~~~-~~~~~ 274 (377)
T 3dwl_C 254 LRSLLWAN--ESAIVAAG-YNYSP 274 (377)
T ss_dssp EEEEEEEE--TTEEEEEE-SSSSE
T ss_pred eEEEEEcC--CCCEEEEE-cCCcE
Confidence 46777765 33433444 45555
No 212
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=72.36 E-value=1.1e+02 Score=32.70 Aligned_cols=114 Identities=12% Similarity=0.091 Sum_probs=64.9
Q ss_pred CceEEEEcC-CCcEEEEECCCCeeEEEEc-CCCCccccccCCCcCccccCCcceEEEcC--CCCEEEEECCCCEEEEEcC
Q 011014 84 EPFSVAVSP-SGELLVLDSENNSRPKLVA-GSPEGYYGHVDGRPRGARMNHPKGLAVDD--RGNIYIADTMNMAIRKISD 159 (495)
Q Consensus 84 ~P~GIAVd~-dG~LyVaDs~n~~ii~iva-Gs~~g~~G~~dG~~~~a~f~~P~GIAVD~--dGnIYVAD~~N~rIrk~d~ 159 (495)
....+++++ +|+++++-..+. .+.+.. .+......... ..-.....+++.+ +|.++++=..++.|+.++.
T Consensus 142 ~v~~~~~~p~~~~~l~~~~~dg-~v~vwd~~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~ 215 (814)
T 3mkq_A 142 FVMCVAFNPKDPSTFASGCLDR-TVKVWSLGQSTPNFTLTT-----GQERGVNYVDYYPLPDKPYMITASDDLTIKIWDY 215 (814)
T ss_dssp CEEEEEEETTEEEEEEEEETTS-EEEEEETTCSSCSEEEEC-----CCTTCCCEEEECCSTTCCEEEEECTTSEEEEEET
T ss_pred cEEEEEEEcCCCCEEEEEeCCC-eEEEEECCCCcceeEEec-----CCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEEC
Confidence 457788888 777666655554 444443 21111000000 0113345788887 8888888778899999994
Q ss_pred -CC--cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCce
Q 011014 160 -TG--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDC 221 (495)
Q Consensus 160 -~G--V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~gN~rI~~~d~~g~~~ 221 (495)
.+ +.++.+.. .....++ ..+++.++++-...+.|+.++.....+
T Consensus 216 ~~~~~~~~~~~~~-----------------~~v~~~~-~~~~~~~l~~~~~dg~v~vwd~~~~~~ 262 (814)
T 3mkq_A 216 QTKSCVATLEGHM-----------------SNVSFAV-FHPTLPIIISGSEDGTLKIWNSSTYKV 262 (814)
T ss_dssp TTTEEEEEEECCS-----------------SCEEEEE-ECSSSSEEEEEETTSCEEEEETTTCSE
T ss_pred CCCcEEEEEcCCC-----------------CCEEEEE-EcCCCCEEEEEeCCCeEEEEECCCCcE
Confidence 34 44443210 1223455 456666666665667777777776443
No 213
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=71.98 E-value=67 Score=30.29 Aligned_cols=73 Identities=14% Similarity=0.237 Sum_probs=49.7
Q ss_pred cceEEEcCCCCEEEEECCCCEEEEEcC-CC--cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECCCC
Q 011014 133 PKGLAVDDRGNIYIADTMNMAIRKISD-TG--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQ 209 (495)
Q Consensus 133 P~GIAVD~dGnIYVAD~~N~rIrk~d~-~G--V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~gN~ 209 (495)
-..+++.++|+++++=...+.|+++|. .| +.++.+-. ..-..|+ ..+++.++++-...+
T Consensus 68 v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~-----------------~~v~~~~-~~~~~~~l~s~s~D~ 129 (319)
T 3frx_A 68 VQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHK-----------------SDVMSVD-IDKKASMIISGSRDK 129 (319)
T ss_dssp EEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCS-----------------SCEEEEE-ECTTSCEEEEEETTS
T ss_pred EEEEEECCCCCEEEEEeCCCEEEEEECCCCCeeEEEccCC-----------------CcEEEEE-EcCCCCEEEEEeCCC
Confidence 347899999998888777899999994 45 44453311 1123455 466777777776778
Q ss_pred eEEEEECCCCceee
Q 011014 210 AIREIQLHDDDCSD 223 (495)
Q Consensus 210 rI~~~d~~g~~~~~ 223 (495)
.|+.++..+..+..
T Consensus 130 ~i~vwd~~~~~~~~ 143 (319)
T 3frx_A 130 TIKVWTIKGQCLAT 143 (319)
T ss_dssp CEEEEETTSCEEEE
T ss_pred eEEEEECCCCeEEE
Confidence 88888887765443
No 214
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=70.34 E-value=1.1e+02 Score=31.97 Aligned_cols=81 Identities=10% Similarity=0.107 Sum_probs=42.6
Q ss_pred CcceEEEcCCCCEEEEECCCC--EEEEEcC-CC-cEEEecCcccCCCCCCCCCCcCcccC-CCceEEEECCCCeEEEE-E
Q 011014 132 HPKGLAVDDRGNIYIADTMNM--AIRKISD-TG-VTTIAGGKWSRGVGHVDGPSEDAKFS-NDFDVVYVGSSCSLLVI-D 205 (495)
Q Consensus 132 ~P~GIAVD~dGnIYVAD~~N~--rIrk~d~-~G-V~tiaGg~~G~~~g~~dG~~~~a~f~-~P~gVa~vd~~G~LyVa-D 205 (495)
....+++.+||+||++-..++ +|.+++. +| ...+..+.... .. ..+. ....++ ..+++.++++ .
T Consensus 243 ~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~-----~~----p~w~~~~~~~~-~~~~~~~~~~~~ 312 (662)
T 3azo_A 243 AIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCRREEEF-----AG----PLWTPGMRWFA-PLANGLIAVVHG 312 (662)
T ss_dssp CEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSCCSSBS-----SC----CCCSTTCCSEE-ECTTSCEEEEEB
T ss_pred eEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeecccccccc-----cC----ccccccCceEe-EeCCCEEEEEEE
Confidence 456789999999777655444 8999985 44 33332211110 00 0111 123455 3444555443 3
Q ss_pred CCCCeEEEEECCCCcee
Q 011014 206 RGNQAIREIQLHDDDCS 222 (495)
Q Consensus 206 ~gN~rI~~~d~~g~~~~ 222 (495)
.+..+|+.+++++....
T Consensus 313 ~~~~~l~~~d~~~~~~~ 329 (662)
T 3azo_A 313 KGAAVLGILDPESGELV 329 (662)
T ss_dssp SSSCEEEEEETTTTEEE
T ss_pred cCccEEEEEECCCCcEE
Confidence 34556777787765544
No 215
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=69.98 E-value=60 Score=28.86 Aligned_cols=143 Identities=13% Similarity=0.038 Sum_probs=70.0
Q ss_pred CceEEEEcCCCcEEEEECCCCeeEEEEcC-C-CCccccccCCCcCccccCCcceEEEcCCCCEEEEEC----CCCEEEEE
Q 011014 84 EPFSVAVSPSGELLVLDSENNSRPKLVAG-S-PEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADT----MNMAIRKI 157 (495)
Q Consensus 84 ~P~GIAVd~dG~LyVaDs~n~~ii~ivaG-s-~~g~~G~~dG~~~~a~f~~P~GIAVD~dGnIYVAD~----~N~rIrk~ 157 (495)
...+++++++|+.+++.... .+.++.- + ..-.. ...+ ..-.....++++++|+.+++-. ...+|..+
T Consensus 43 ~v~~~~~spdg~~l~~~~~~--~i~~~d~~~~~~~~~-~~~~----~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~ 115 (297)
T 2ojh_A 43 LFEAPNWSPDGKYLLLNSEG--LLYRLSLAGDPSPEK-VDTG----FATICNNDHGISPDGALYAISDKVEFGKSAIYLL 115 (297)
T ss_dssp CCEEEEECTTSSEEEEEETT--EEEEEESSSCCSCEE-CCCT----TCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEE
T ss_pred ceEeeEECCCCCEEEEEcCC--eEEEEeCCCCCCceE-eccc----cccccccceEECCCCCEEEEEEeCCCCcceEEEE
Confidence 46788899998866665432 3444321 1 10000 0000 0112356789999998444433 35788888
Q ss_pred cCCC--cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCe-EEEEECCCC--eEEEEECCCCceeeC-CCCCCcc
Q 011014 158 SDTG--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCS-LLVIDRGNQ--AIREIQLHDDDCSDN-YDDTFHL 231 (495)
Q Consensus 158 d~~G--V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~-LyVaD~gN~--rI~~~d~~g~~~~~~-~~~g~P~ 231 (495)
+.++ ...+... .....++ ..++|. |+++...++ +|+.++..+...... ...+...
T Consensus 116 ~~~~~~~~~~~~~------------------~~~~~~~-~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 176 (297)
T 2ojh_A 116 PSTGGTPRLMTKN------------------LPSYWHG-WSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGRND 176 (297)
T ss_dssp ETTCCCCEECCSS------------------SSEEEEE-ECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSSCEE
T ss_pred ECCCCceEEeecC------------------CCccceE-ECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCCCccc
Confidence 8544 3333111 0133445 455554 554443334 566666666554432 2333456
Q ss_pred eEEEEecCcCeEEEEEccCCce
Q 011014 232 GIFVLVAAAFFGYMLALLQRRV 253 (495)
Q Consensus 232 GIAvd~~a~~~~yv~d~~~~Rv 253 (495)
.+++... +..++++......+
T Consensus 177 ~~~~s~d-g~~l~~~~~~~~~~ 197 (297)
T 2ojh_A 177 GPDYSPD-GRWIYFNSSRTGQM 197 (297)
T ss_dssp EEEECTT-SSEEEEEECTTSSC
T ss_pred cceECCC-CCEEEEEecCCCCc
Confidence 6666542 23344444333333
No 216
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=68.95 E-value=69 Score=29.19 Aligned_cols=32 Identities=13% Similarity=0.122 Sum_probs=25.4
Q ss_pred ceEEEcCCCCEEEEECCCCEEEEEcCC-C--cEEE
Q 011014 134 KGLAVDDRGNIYIADTMNMAIRKISDT-G--VTTI 165 (495)
Q Consensus 134 ~GIAVD~dGnIYVAD~~N~rIrk~d~~-G--V~ti 165 (495)
..|++.++|+++++=...+.|+.++.. + +.++
T Consensus 71 ~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~ 105 (318)
T 4ggc_A 71 SSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNM 105 (318)
T ss_dssp EEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEE
T ss_pred EEEEECCCCCEEEEEECCCcEEEeecCCceeEEEe
Confidence 589999999988887788999999944 4 4444
No 217
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=68.87 E-value=72 Score=29.38 Aligned_cols=76 Identities=12% Similarity=0.160 Sum_probs=42.9
Q ss_pred CceEEEEcCC-CcEEEEECCCCeeEEEEc-CCCCccccccCCCcCccccCCcceEEEcCCCCEEEEECCCCEEEEEcCCC
Q 011014 84 EPFSVAVSPS-GELLVLDSENNSRPKLVA-GSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMNMAIRKISDTG 161 (495)
Q Consensus 84 ~P~GIAVd~d-G~LyVaDs~n~~ii~iva-Gs~~g~~G~~dG~~~~a~f~~P~GIAVD~dGnIYVAD~~N~rIrk~d~~G 161 (495)
.-..|+++|+ ++++++-+... .+++.. .......+.... .....-.....++++++|+++++=...+.|+.++...
T Consensus 40 ~V~~v~~sp~~~~~l~S~s~D~-~i~vWd~~~~~~~~~~~~~-~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~ 117 (340)
T 4aow_A 40 WVTQIATTPQFPDMILSASRDK-TIIMWKLTRDETNYGIPQR-ALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTT 117 (340)
T ss_dssp CEEEEEECTTCTTEEEEEETTS-CEEEEEECCSSSCSEEEEE-EECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred CEEEEEEeCCCCCEEEEEcCCC-eEEEEECCCCCcccceeeE-EEeCCCCCEEEEEECCCCCEEEEEcccccceEEeecc
Confidence 4578899986 67777665444 344432 111000000000 0000112456899999999888777788899888555
No 218
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=68.74 E-value=47 Score=30.90 Aligned_cols=100 Identities=8% Similarity=-0.044 Sum_probs=54.1
Q ss_pred EcCCCCEEEEECCCCEEEEEcCCC--cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECC---CCeEEEEECCCCeEE
Q 011014 138 VDDRGNIYIADTMNMAIRKISDTG--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGS---SCSLLVIDRGNQAIR 212 (495)
Q Consensus 138 VD~dGnIYVAD~~N~rIrk~d~~G--V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~---~G~LyVaD~gN~rI~ 212 (495)
++++++++++-..++.|+.++... ....... -.....++ ..+ ++.++++-..++.|+
T Consensus 176 ~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~-----------------~~~v~~~~-~~~~~~~~~~l~~~~~dg~i~ 237 (357)
T 3i2n_A 176 YNQEERVVCAGYDNGDIKLFDLRNMALRWETNI-----------------KNGVCSLE-FDRKDISMNKLVATSLEGKFH 237 (357)
T ss_dssp CC-CCCEEEEEETTSEEEEEETTTTEEEEEEEC-----------------SSCEEEEE-ESCSSSSCCEEEEEESTTEEE
T ss_pred cCCCCCEEEEEccCCeEEEEECccCceeeecCC-----------------CCceEEEE-cCCCCCCCCEEEEECCCCeEE
Confidence 567888888777788999999544 2111110 01234455 344 555555555677888
Q ss_pred EEECCCCceee-------CCCCCCcceEEEEecCcCe-EEEEEccCCceEEEee
Q 011014 213 EIQLHDDDCSD-------NYDDTFHLGIFVLVAAAFF-GYMLALLQRRVQAMFS 258 (495)
Q Consensus 213 ~~d~~g~~~~~-------~~~~g~P~GIAvd~~a~~~-~yv~d~~~~Rv~~~~~ 258 (495)
.++.....+.. ....+.-..+++.. .+. +.++......| .++.
T Consensus 238 i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~~l~~~~~dg~i-~iwd 288 (357)
T 3i2n_A 238 VFDMRTQHPTKGFASVSEKAHKSTVWQVRHLP--QNRELFLTAGGAGGL-HLWK 288 (357)
T ss_dssp EEEEEEEETTTEEEEEEEECCSSCEEEEEEET--TEEEEEEEEETTSEE-EEEE
T ss_pred EEeCcCCCcccceeeeccCCCcCCEEEEEECC--CCCcEEEEEeCCCcE-EEee
Confidence 88766533211 12233345566664 233 45566666666 3443
No 219
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=67.95 E-value=83 Score=30.66 Aligned_cols=29 Identities=14% Similarity=0.100 Sum_probs=23.5
Q ss_pred CcceEEEcCCCCEEEEECCCCEEEEEcCC
Q 011014 132 HPKGLAVDDRGNIYIADTMNMAIRKISDT 160 (495)
Q Consensus 132 ~P~GIAVD~dGnIYVAD~~N~rIrk~d~~ 160 (495)
....|+++++|+++++=..++.|+.+|..
T Consensus 216 ~v~~~~~s~~~~~l~s~~~dg~i~iwd~~ 244 (437)
T 3gre_A 216 AVSSICIDEECCVLILGTTRGIIDIWDIR 244 (437)
T ss_dssp CEEEEEECTTSCEEEEEETTSCEEEEETT
T ss_pred ceEEEEECCCCCEEEEEcCCCeEEEEEcC
Confidence 45689999999988877778889999943
No 220
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=67.53 E-value=42 Score=30.63 Aligned_cols=114 Identities=10% Similarity=0.038 Sum_probs=59.9
Q ss_pred CceEEEEcCCCcEEEEECCCCeeEEEEcCC-CCc--cccccCCCcCccccCCcceEEEcC--CCCEEEEECCCCEEEEEc
Q 011014 84 EPFSVAVSPSGELLVLDSENNSRPKLVAGS-PEG--YYGHVDGRPRGARMNHPKGLAVDD--RGNIYIADTMNMAIRKIS 158 (495)
Q Consensus 84 ~P~GIAVd~dG~LyVaDs~n~~ii~ivaGs-~~g--~~G~~dG~~~~a~f~~P~GIAVD~--dGnIYVAD~~N~rIrk~d 158 (495)
.-..|+++++|+++++-..+. .+++..-. ... ..-.. ....-.....|++.+ +|+++++=..++.|+.++
T Consensus 13 ~v~~~~~~~~~~~l~~~~~dg-~i~iw~~~~~~~~~~~~~~----~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd 87 (351)
T 3f3f_A 13 LVHDVVYDFYGRHVATCSSDQ-HIKVFKLDKDTSNWELSDS----WRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWE 87 (351)
T ss_dssp CEEEEEECSSSSEEEEEETTS-EEEEEEECSSSCCEEEEEE----EECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEE
T ss_pred ceeEEEEcCCCCEEEEeeCCC-eEEEEECCCCCCcceecce----eccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEe
Confidence 356788888888666655444 44444211 100 00000 000112345888887 578777766678888888
Q ss_pred CCC------------cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCC--CeEEEEECCCCeEEEEECCCCc
Q 011014 159 DTG------------VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSS--CSLLVIDRGNQAIREIQLHDDD 220 (495)
Q Consensus 159 ~~G------------V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~--G~LyVaD~gN~rI~~~d~~g~~ 220 (495)
.+. +.++.+. -....+++ ..++ +.++++-..++.|+.+++....
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~-----------------~~~v~~~~-~~~~~~~~~l~~~~~dg~v~iwd~~~~~ 145 (351)
T 3f3f_A 88 EDPDQEECSGRRWNKLCTLNDS-----------------KGSLYSVK-FAPAHLGLKLACLGNDGILRLYDALEPS 145 (351)
T ss_dssp ECTTSCTTSSCSEEEEEEECCC-----------------SSCEEEEE-ECCGGGCSEEEEEETTCEEEEEECSSTT
T ss_pred cCCCcccccccCcceeeeeccc-----------------CCceeEEE-EcCCCCCcEEEEecCCCcEEEecCCChH
Confidence 322 2222110 01234455 4554 6655555567788888866543
No 221
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=67.24 E-value=70 Score=31.20 Aligned_cols=161 Identities=12% Similarity=-0.034 Sum_probs=79.6
Q ss_pred CceEEEEcC-CCcEEEEECCCCeeEEEEcCCCCccccc-cCCCcCccccCCcceEEEcCCCCEEEEECCCCEEEEEcC--
Q 011014 84 EPFSVAVSP-SGELLVLDSENNSRPKLVAGSPEGYYGH-VDGRPRGARMNHPKGLAVDDRGNIYIADTMNMAIRKISD-- 159 (495)
Q Consensus 84 ~P~GIAVd~-dG~LyVaDs~n~~ii~ivaGs~~g~~G~-~dG~~~~a~f~~P~GIAVD~dGnIYVAD~~N~rIrk~d~-- 159 (495)
.-..|++.+ +|.++++-+... .+++..-.. ...+. .........-.....|++.++++++++=...+.|++++-
T Consensus 65 ~V~~~~~s~~~~~~l~s~s~dg-~v~vwd~~~-~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~ 142 (437)
T 3gre_A 65 SITSSAVSPGETPYLITGSDQG-VIKIWNLKE-IIVGEVYSSSLTYDCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNH 142 (437)
T ss_dssp CEEEEEEECSSSCEEEEEETTS-EEEEEEHHH-HHTTCCCSCSEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEE
T ss_pred ceEEEEECCCCCCEEEEecCCc-eEEEeECcc-cccCcccceeeeccCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEecc
Confidence 467899999 898888776555 555543110 00000 000000001123468999999987777777888888874
Q ss_pred --CC--cEEEecCcccCCCCCCCCCCcCcccCCCceEEE-ECCCCeEEEEECCCCeEEEEECCCCceee-CC---CCCCc
Q 011014 160 --TG--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVY-VGSSCSLLVIDRGNQAIREIQLHDDDCSD-NY---DDTFH 230 (495)
Q Consensus 160 --~G--V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~-vd~~G~LyVaD~gN~rI~~~d~~g~~~~~-~~---~~g~P 230 (495)
.| +.+..+.....-....++ .-.....+.. ...++.++++-..++.|+.+++....+.. .. ..+..
T Consensus 143 ~~~~~~~~~~~~~~i~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v 217 (437)
T 3gre_A 143 YQQESEVKFLNCECIRKINLKNFG-----KNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHGAV 217 (437)
T ss_dssp EEETTEEEEEEEEEEEEEEGGGGS-----SCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEECCGGGCCE
T ss_pred ccCCceeeccccceeEEEEccCcc-----cccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCce
Confidence 33 222211100000000000 0001112221 23456666666677888888887655432 21 22345
Q ss_pred ceEEEEecCcCeEEEEEccCCce
Q 011014 231 LGIFVLVAAAFFGYMLALLQRRV 253 (495)
Q Consensus 231 ~GIAvd~~a~~~~yv~d~~~~Rv 253 (495)
..+++.. .+...++......|
T Consensus 218 ~~~~~s~--~~~~l~s~~~dg~i 238 (437)
T 3gre_A 218 SSICIDE--ECCVLILGTTRGII 238 (437)
T ss_dssp EEEEECT--TSCEEEEEETTSCE
T ss_pred EEEEECC--CCCEEEEEcCCCeE
Confidence 5666654 34444555555555
No 222
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=66.12 E-value=98 Score=29.92 Aligned_cols=126 Identities=10% Similarity=-0.018 Sum_probs=67.2
Q ss_pred CceEEEEcCCCcEEEEECCCCeeEEEEcCCCCccccc-c--CCCcCccccCCcceEEEcCCC-CEEEEECCCCEEEEEcC
Q 011014 84 EPFSVAVSPSGELLVLDSENNSRPKLVAGSPEGYYGH-V--DGRPRGARMNHPKGLAVDDRG-NIYIADTMNMAIRKISD 159 (495)
Q Consensus 84 ~P~GIAVd~dG~LyVaDs~n~~ii~ivaGs~~g~~G~-~--dG~~~~a~f~~P~GIAVD~dG-nIYVAD~~N~rIrk~d~ 159 (495)
.-..|++.++|+++++- . .+.+++..-...+..-. . ........-.....|+++++| +++++=...+.|+.+|.
T Consensus 179 ~v~~~~~~~~~~~l~s~-~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~ 256 (447)
T 3dw8_B 179 HINSISINSDYETYLSA-D-DLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDM 256 (447)
T ss_dssp CCCEEEECTTSSEEEEE-C-SSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEET
T ss_pred ceEEEEEcCCCCEEEEe-C-CCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEEC
Confidence 45789999999988876 3 33566654221010000 0 000000111245689999998 88887777889999993
Q ss_pred C-C------cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCC
Q 011014 160 T-G------VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHD 218 (495)
Q Consensus 160 ~-G------V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~gN~rI~~~d~~g 218 (495)
. + +.++.+..... ...........-..++ ..++|.++++-.. +.|+.+++..
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~v~~~~-~s~~g~~l~~~~~-~~v~iwd~~~ 315 (447)
T 3dw8_B 257 RASALCDRHSKLFEEPEDPS-----NRSFFSEIISSISDVK-FSHSGRYMMTRDY-LSVKVWDLNM 315 (447)
T ss_dssp TTCSSSCTTCEEECCC----------CCHHHHHTTCEEEEE-ECTTSSEEEEEES-SEEEEEETTC
T ss_pred cCCccccceeeEeccCCCcc-----ccccccccCceEEEEE-ECCCCCEEEEeeC-CeEEEEeCCC
Confidence 3 2 24442211000 0000000001334566 5667776666555 8999999864
No 223
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=65.35 E-value=1.1e+02 Score=30.09 Aligned_cols=94 Identities=10% Similarity=-0.021 Sum_probs=48.1
Q ss_pred ceEEEcCCCCEEEEECCCCEEEEEcCCC-cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECCCCeEE
Q 011014 134 KGLAVDDRGNIYIADTMNMAIRKISDTG-VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIR 212 (495)
Q Consensus 134 ~GIAVD~dGnIYVAD~~N~rIrk~d~~G-V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~gN~rI~ 212 (495)
..++++ ++.+++=...+.|+.++... ...+.... ..+..++....++.++++-. .+.|+
T Consensus 356 ~~~~~~--~~~l~s~s~dg~v~vwd~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~l~~~~-dg~i~ 415 (464)
T 3v7d_B 356 GLLRLS--DKFLVSAAADGSIRGWDANDYSRKFSYHH-----------------TNLSAITTFYVSDNILVSGS-ENQFN 415 (464)
T ss_dssp EEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEEEC-----------------TTCCCEEEEEECSSEEEEEE-TTEEE
T ss_pred EEEEEc--CCEEEEEeCCCcEEEEECCCCceeeeecC-----------------CCCccEEEEEeCCCEEEEec-CCeEE
Confidence 356665 45555555577788888443 22221110 11122222455666665554 67899
Q ss_pred EEECCCCceeeC---CCCCCcceEEEEecCcCeEEEEEccC
Q 011014 213 EIQLHDDDCSDN---YDDTFHLGIFVLVAAAFFGYMLALLQ 250 (495)
Q Consensus 213 ~~d~~g~~~~~~---~~~g~P~GIAvd~~a~~~~yv~d~~~ 250 (495)
.++.....+... ...+.-..++.+ +..+.++...+
T Consensus 416 iwd~~~g~~~~~~~~~~~~~v~~v~~~---~~~l~~~~~~~ 453 (464)
T 3v7d_B 416 IYNLRSGKLVHANILKDADQIWSVNFK---GKTLVAAVEKD 453 (464)
T ss_dssp EEETTTCCEEESCTTTTCSEEEEEEEE---TTEEEEEEEET
T ss_pred EEECCCCcEEehhhccCCCcEEEEEec---CCEEEEEEEeC
Confidence 999877665532 222334556665 34444444333
No 224
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=65.14 E-value=86 Score=28.86 Aligned_cols=29 Identities=7% Similarity=-0.012 Sum_probs=23.8
Q ss_pred cceEEEcCCCCEEEEECCCCEEEEEcCCC
Q 011014 133 PKGLAVDDRGNIYIADTMNMAIRKISDTG 161 (495)
Q Consensus 133 P~GIAVD~dGnIYVAD~~N~rIrk~d~~G 161 (495)
-..|+++++|+++++=...+.|+.+|...
T Consensus 218 v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~ 246 (340)
T 4aow_A 218 LNTVTVSPDGSLCASGGKDGQAMLWDLNE 246 (340)
T ss_dssp EEEEEECTTSSEEEEEETTCEEEEEETTT
T ss_pred EEEEEECCCCCEEEEEeCCCeEEEEEecc
Confidence 35899999999888777789999999554
No 225
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=64.51 E-value=98 Score=29.33 Aligned_cols=70 Identities=14% Similarity=0.211 Sum_probs=46.5
Q ss_pred cceEEEcCCCCEEEEECCCCEEEEEcC-CC--cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECCCC
Q 011014 133 PKGLAVDDRGNIYIADTMNMAIRKISD-TG--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQ 209 (495)
Q Consensus 133 P~GIAVD~dGnIYVAD~~N~rIrk~d~-~G--V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~gN~ 209 (495)
-..|+++++|.+.++-...+.|+.+|. .+ +.++.+-. ..-.+|+ ..+++..+++-...+
T Consensus 79 V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~-----------------~~v~~v~-~sp~~~~l~s~~~d~ 140 (343)
T 2xzm_R 79 VSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQ-----------------SEVYSVA-FSPDNRQILSAGAER 140 (343)
T ss_dssp EEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEECCC-----------------SCEEEEE-ECSSTTEEEEEETTS
T ss_pred eEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCC-----------------CcEEEEE-ECCCCCEEEEEcCCC
Confidence 358899999998888888899999994 44 44443311 1223455 456666655555667
Q ss_pred eEEEEECCCCc
Q 011014 210 AIREIQLHDDD 220 (495)
Q Consensus 210 rI~~~d~~g~~ 220 (495)
.|+.++..+..
T Consensus 141 ~i~~wd~~~~~ 151 (343)
T 2xzm_R 141 EIKLWNILGEC 151 (343)
T ss_dssp CEEEEESSSCE
T ss_pred EEEEEeccCCc
Confidence 88888876543
No 226
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=64.21 E-value=94 Score=29.89 Aligned_cols=72 Identities=14% Similarity=0.173 Sum_probs=48.9
Q ss_pred CcceEEEcCCCCEEEEECCCCE-EEEEcC-CC--cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECC
Q 011014 132 HPKGLAVDDRGNIYIADTMNMA-IRKISD-TG--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRG 207 (495)
Q Consensus 132 ~P~GIAVD~dGnIYVAD~~N~r-Irk~d~-~G--V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~g 207 (495)
.-..|+++++|+++++=...+. |+.+|. +| +.++..+.. -..-..++ ..++|.++++-..
T Consensus 197 ~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h---------------~~~v~~~~-~s~~~~~l~s~s~ 260 (355)
T 3vu4_A 197 PIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLD---------------RADVVDMK-WSTDGSKLAVVSD 260 (355)
T ss_dssp CEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECTTC---------------CSCEEEEE-ECTTSCEEEEEET
T ss_pred ceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCC---------------CCcEEEEE-ECCCCCEEEEEEC
Confidence 3468999999998888777887 999994 45 555531100 01234566 5777777777777
Q ss_pred CCeEEEEECCCC
Q 011014 208 NQAIREIQLHDD 219 (495)
Q Consensus 208 N~rI~~~d~~g~ 219 (495)
.+.|+.+++...
T Consensus 261 d~~v~iw~~~~~ 272 (355)
T 3vu4_A 261 KWTLHVFEIFND 272 (355)
T ss_dssp TCEEEEEESSCC
T ss_pred CCEEEEEEccCC
Confidence 788888887653
No 227
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=63.49 E-value=1.5e+02 Score=31.01 Aligned_cols=79 Identities=20% Similarity=0.188 Sum_probs=47.7
Q ss_pred CceEEEEcCCCcEEEEECCCCeeEEEEcCC-C--CccccccCCCc-CccccCCcceEEEcCCCCEEEEECCCCEEEEEcC
Q 011014 84 EPFSVAVSPSGELLVLDSENNSRPKLVAGS-P--EGYYGHVDGRP-RGARMNHPKGLAVDDRGNIYIADTMNMAIRKISD 159 (495)
Q Consensus 84 ~P~GIAVd~dG~LyVaDs~n~~ii~ivaGs-~--~g~~G~~dG~~-~~a~f~~P~GIAVD~dGnIYVAD~~N~rIrk~d~ 159 (495)
.-..|+++++|.++++-+... .+++.... . ..... .... ....-....+|+++++|.++++=...+.|+.+|.
T Consensus 192 ~V~~v~fspdg~~las~s~D~-~i~lwd~~~g~~~~~~~--~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~ 268 (611)
T 1nr0_A 192 FVHSVRYNPDGSLFASTGGDG-TIVLYNGVDGTKTGVFE--DDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNV 268 (611)
T ss_dssp CEEEEEECTTSSEEEEEETTS-CEEEEETTTCCEEEECB--CTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred ceEEEEECCCCCEEEEEECCC-cEEEEECCCCcEeeeec--cccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeC
Confidence 356888999998877766555 45554321 1 11110 0000 0011234568999999998888778899999994
Q ss_pred C-C--cEEE
Q 011014 160 T-G--VTTI 165 (495)
Q Consensus 160 ~-G--V~ti 165 (495)
. + +.++
T Consensus 269 ~~~~~~~~~ 277 (611)
T 1nr0_A 269 ATLKVEKTI 277 (611)
T ss_dssp TTTEEEEEE
T ss_pred CCCceeeee
Confidence 4 4 4444
No 228
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=63.35 E-value=56 Score=33.74 Aligned_cols=71 Identities=10% Similarity=0.137 Sum_probs=41.1
Q ss_pred ceEEEcCCCCEEE--E-ECCC-CEEEEEcC-CC-cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCe-EEEEEC
Q 011014 134 KGLAVDDRGNIYI--A-DTMN-MAIRKISD-TG-VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCS-LLVIDR 206 (495)
Q Consensus 134 ~GIAVD~dGnIYV--A-D~~N-~rIrk~d~-~G-V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~-LyVaD~ 206 (495)
..+++++||+.++ + |..+ ..|+++|. +| +.++.+... ....++ ..++|. |+.++.
T Consensus 153 ~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~~l~~~~~-----------------~~~~~~-~SpDG~~l~~~~~ 214 (582)
T 3o4h_A 153 FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLRVFDSGEG-----------------SFSSAS-ISPGMKVTAGLET 214 (582)
T ss_dssp CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCEEECCSSC-----------------EEEEEE-ECTTSCEEEEEEC
T ss_pred ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCceEeecCCC-----------------ccccce-ECCCCCEEEEccC
Confidence 6889999999555 2 2223 67999994 44 555533210 113445 355554 444444
Q ss_pred CC-CeEEEEECCCCcee
Q 011014 207 GN-QAIREIQLHDDDCS 222 (495)
Q Consensus 207 gN-~rI~~~d~~g~~~~ 222 (495)
.+ ..|+++++++..+.
T Consensus 215 ~~~~~i~~~d~~~~~~~ 231 (582)
T 3o4h_A 215 AREARLVTVDPRDGSVE 231 (582)
T ss_dssp SSCEEEEEECTTTCCEE
T ss_pred CCeeEEEEEcCCCCcEE
Confidence 32 37888888876655
No 229
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=62.43 E-value=1.5e+02 Score=30.84 Aligned_cols=73 Identities=14% Similarity=0.126 Sum_probs=40.1
Q ss_pred cceEEEcCCCC-EEEEECC-------CCEEEEEcCC--C----cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCC
Q 011014 133 PKGLAVDDRGN-IYIADTM-------NMAIRKISDT--G----VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSS 198 (495)
Q Consensus 133 P~GIAVD~dGn-IYVAD~~-------N~rIrk~d~~--G----V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~ 198 (495)
..++++++||+ |+++... ...|++++.+ | ...+..+.. .....++ ..++
T Consensus 190 ~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~----------------~~~~~~~-~spd 252 (662)
T 3azo_A 190 VTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPE----------------EAIAQAE-WAPD 252 (662)
T ss_dssp ECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETT----------------BCEEEEE-ECTT
T ss_pred ccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCC----------------ceEcceE-ECCC
Confidence 35678999997 5444322 2578888843 4 233322100 1233455 4556
Q ss_pred CeEEEEECCCC--eEEEEECCCCcee
Q 011014 199 CSLLVIDRGNQ--AIREIQLHDDDCS 222 (495)
Q Consensus 199 G~LyVaD~gN~--rI~~~d~~g~~~~ 222 (495)
|.||++...++ +|+++++++..+.
T Consensus 253 g~l~~~~~~~~~~~l~~~~~~~~~~~ 278 (662)
T 3azo_A 253 GSLIVATDRTGWWNLHRVDPATGAAT 278 (662)
T ss_dssp SCEEEEECTTSSCEEEEECTTTCCEE
T ss_pred CeEEEEECCCCCeEEEEEECCCCcee
Confidence 66665544334 7888887655443
No 230
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=61.42 E-value=1.2e+02 Score=29.18 Aligned_cols=72 Identities=6% Similarity=-0.032 Sum_probs=45.6
Q ss_pred CceEEEEcCCCcEEEEECCCCeeEEEEcCC-CCccccccCCCcCccccCCcceEEEcCCCCEEEEECCCCEEEEEcC
Q 011014 84 EPFSVAVSPSGELLVLDSENNSRPKLVAGS-PEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMNMAIRKISD 159 (495)
Q Consensus 84 ~P~GIAVd~dG~LyVaDs~n~~ii~ivaGs-~~g~~G~~dG~~~~a~f~~P~GIAVD~dGnIYVAD~~N~rIrk~d~ 159 (495)
.-..|+++++|+++++-+....++++..-. ..-..-...| ..-..-..|+++++|+++++=...+.|+.++-
T Consensus 197 ~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g----~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~ 269 (355)
T 3vu4_A 197 PIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRG----LDRADVVDMKWSTDGSKLAVVSDKWTLHVFEI 269 (355)
T ss_dssp CEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECT----TCCSCEEEEEECTTSCEEEEEETTCEEEEEES
T ss_pred ceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcC----CCCCcEEEEEECCCCCEEEEEECCCEEEEEEc
Confidence 457899999999888776665336665422 1110000001 01123458999999998888778899999983
No 231
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=59.76 E-value=1.3e+02 Score=29.13 Aligned_cols=73 Identities=12% Similarity=0.016 Sum_probs=44.3
Q ss_pred CcceEEEcCCCCEEEEECCCCEEEEEcCC-C--cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEEC--
Q 011014 132 HPKGLAVDDRGNIYIADTMNMAIRKISDT-G--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDR-- 206 (495)
Q Consensus 132 ~P~GIAVD~dGnIYVAD~~N~rIrk~d~~-G--V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~-- 206 (495)
...++++.++|+++++=..++.|+.+|.. + +.++.+.. .....+++......++++-.
T Consensus 219 ~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~-----------------~~v~~~~~~p~~~~ll~~~~gs 281 (401)
T 4aez_A 219 EVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHN-----------------AAVKAVAWCPWQSNLLATGGGT 281 (401)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCS-----------------SCCCEEEECTTSTTEEEEECCT
T ss_pred CeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCc-----------------ceEEEEEECCCCCCEEEEecCC
Confidence 45689999999988877778899999954 3 33442211 12344553333445555543
Q ss_pred CCCeEEEEECCCCce
Q 011014 207 GNQAIREIQLHDDDC 221 (495)
Q Consensus 207 gN~rI~~~d~~g~~~ 221 (495)
..+.|+.++.....+
T Consensus 282 ~d~~i~i~d~~~~~~ 296 (401)
T 4aez_A 282 MDKQIHFWNAATGAR 296 (401)
T ss_dssp TTCEEEEEETTTCCE
T ss_pred CCCEEEEEECCCCCE
Confidence 466777777665544
No 232
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=59.63 E-value=1.7e+02 Score=30.61 Aligned_cols=71 Identities=10% Similarity=0.109 Sum_probs=40.1
Q ss_pred ceEEEcC--CCCEEE-EEC-CCCEEEEEcCCC--cEEEecCcccCCCCCCCCCCcCcccCCCce-EEEECCCC-eEEEEE
Q 011014 134 KGLAVDD--RGNIYI-ADT-MNMAIRKISDTG--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFD-VVYVGSSC-SLLVID 205 (495)
Q Consensus 134 ~GIAVD~--dGnIYV-AD~-~N~rIrk~d~~G--V~tiaGg~~G~~~g~~dG~~~~a~f~~P~g-Va~vd~~G-~LyVaD 205 (495)
..+++.+ +|.+++ ++. +..+|..++.+| +..+.++.. .-.. ++ .+++| .||++.
T Consensus 313 ~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~-----------------~v~~~~~-~spdg~~l~~~~ 374 (706)
T 2z3z_A 313 HPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEW-----------------EVTNFAG-FDPKGTRLYFES 374 (706)
T ss_dssp SCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCSSS-----------------CEEEEEE-ECTTSSEEEEEE
T ss_pred CCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecCCCCe-----------------EEEeeeE-EcCCCCEEEEEe
Confidence 5788988 887444 433 246788888555 444422110 0112 34 45555 576666
Q ss_pred CCCC----eEEEEECCCCcee
Q 011014 206 RGNQ----AIREIQLHDDDCS 222 (495)
Q Consensus 206 ~gN~----rI~~~d~~g~~~~ 222 (495)
..++ .|+.+++++....
T Consensus 375 ~~~~~~~~~l~~~d~~~~~~~ 395 (706)
T 2z3z_A 375 TEASPLERHFYCIDIKGGKTK 395 (706)
T ss_dssp SSSCTTCBEEEEEETTCCCCE
T ss_pred cCCCCceEEEEEEEcCCCCce
Confidence 5544 8888888765433
No 233
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=59.33 E-value=1e+02 Score=27.88 Aligned_cols=108 Identities=6% Similarity=-0.052 Sum_probs=59.7
Q ss_pred cceEEEcCCCCEEEEECCCCEEEEEcCC-C--c----EEEecCcccCCCCCCCCCCcCcccCCCceEEEECC-CCeEEEE
Q 011014 133 PKGLAVDDRGNIYIADTMNMAIRKISDT-G--V----TTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGS-SCSLLVI 204 (495)
Q Consensus 133 P~GIAVD~dGnIYVAD~~N~rIrk~d~~-G--V----~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~-~G~LyVa 204 (495)
-..|+++++|+++++=..++.|+.++.+ + . .++.+. -..-..|++... ++.++++
T Consensus 14 v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~-----------------~~~v~~~~~~~~~d~~~l~s 76 (351)
T 3f3f_A 14 VHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAH-----------------DSSIVAIDWASPEYGRIIAS 76 (351)
T ss_dssp EEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECC-----------------SSCEEEEEECCGGGCSEEEE
T ss_pred eeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccC-----------------CCcEEEEEEcCCCCCCEEEE
Confidence 4589999999977776678889998833 2 1 222111 012344553222 3566655
Q ss_pred ECCCCeEEEEECCCCc----------ee-eCCCCCCcceEEEEecCcCeEEEEEccCCceEEEee
Q 011014 205 DRGNQAIREIQLHDDD----------CS-DNYDDTFHLGIFVLVAAAFFGYMLALLQRRVQAMFS 258 (495)
Q Consensus 205 D~gN~rI~~~d~~g~~----------~~-~~~~~g~P~GIAvd~~a~~~~yv~d~~~~Rv~~~~~ 258 (495)
-...+.|+.++..... .. .....+.-..+++.........++......| .++.
T Consensus 77 ~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v-~iwd 140 (351)
T 3f3f_A 77 ASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGIL-RLYD 140 (351)
T ss_dssp EETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEE-EEEE
T ss_pred EcCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcE-EEec
Confidence 5556778888776642 11 1233334566776652114455566666666 3443
No 234
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=58.51 E-value=48 Score=36.01 Aligned_cols=117 Identities=10% Similarity=0.066 Sum_probs=66.2
Q ss_pred CCceEEEEcCCCcEEEEECCCCeeEEEEcCCCCcccccc--CCCcCccccCCcceEEEcCCCCEEEEECCCCEEEEEcCC
Q 011014 83 MEPFSVAVSPSGELLVLDSENNSRPKLVAGSPEGYYGHV--DGRPRGARMNHPKGLAVDDRGNIYIADTMNMAIRKISDT 160 (495)
Q Consensus 83 ~~P~GIAVd~dG~LyVaDs~n~~ii~ivaGs~~g~~G~~--dG~~~~a~f~~P~GIAVD~dGnIYVAD~~N~rIrk~d~~ 160 (495)
..-.+++++|+|.++.+-+.+. .+++..+.. ..... +..... ..-..|++.++|++.++=+..+.|+.++..
T Consensus 86 ~~V~~vawSPdG~~LAs~s~dg-~V~iwd~~~--~l~~l~~~~~~~~---~sv~svafSPDG~~LAsgs~DGtVkIWd~~ 159 (588)
T 2j04_A 86 CYPRVCKPSPIDDWMAVLSNNG-NVSVFKDNK--MLTNLDSKGNLSS---RTYHCFEWNPIESSIVVGNEDGELQFFSIR 159 (588)
T ss_dssp CCEEEEEECSSSSCEEEEETTS-CEEEEETTE--EEEECCCSSCSTT---TCEEEEEECSSSSCEEEEETTSEEEEEECC
T ss_pred CcEEEEEECCCCCEEEEEeCCC-cEEEEeCCc--eeeeccCCCcccc---ccEEEEEEcCCCCEEEEEcCCCEEEEEECC
Confidence 3468899999999665554444 456654322 11100 100000 123489999999977776778999999944
Q ss_pred C--c--------EEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCce
Q 011014 161 G--V--------TTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDC 221 (495)
Q Consensus 161 G--V--------~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~gN~rI~~~d~~g~~~ 221 (495)
+ + .++.+...| ....-..|++ .++| +++-...+.|+..+.++..+
T Consensus 160 ~~~l~~~~~i~l~ti~~~~~g-------------h~~~V~sVaw-SPdg--Laass~D~tVrlWd~~~~~~ 214 (588)
T 2j04_A 160 KNSENTPEFYFESSIRLSDAG-------------SKDWVTHIVW-YEDV--LVAALSNNSVFSMTVSASSH 214 (588)
T ss_dssp CCTTTCCCCEEEEEEECSCTT-------------CCCCEEEEEE-ETTE--EEEEETTCCEEEECCCSSSS
T ss_pred CCccccccceeeeeeeccccc-------------ccccEEEEEE-cCCc--EEEEeCCCeEEEEECCCCcc
Confidence 3 2 444222111 1123445663 4555 44555567788888777653
No 235
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=58.38 E-value=1.6e+02 Score=29.73 Aligned_cols=145 Identities=8% Similarity=-0.069 Sum_probs=77.5
Q ss_pred CceEEEEcCCCcEEEEECCCC---eeEEEEcCCCCccccccCCCcCccccCCcceEEEcCCCC-EEEEECCCCEEEEEcC
Q 011014 84 EPFSVAVSPSGELLVLDSENN---SRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGN-IYIADTMNMAIRKISD 159 (495)
Q Consensus 84 ~P~GIAVd~dG~LyVaDs~n~---~ii~ivaGs~~g~~G~~dG~~~~a~f~~P~GIAVD~dGn-IYVAD~~N~rIrk~d~ 159 (495)
....++++++|..+++-.... ..+.+.. .. .......+ .-.....+++.++|. ++++-..++.|+.++.
T Consensus 118 ~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d-~~-~~~~~~~~-----~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~ 190 (615)
T 1pgu_A 118 PISDISWDFEGRRLCVVGEGRDNFGVFISWD-SG-NSLGEVSG-----HSQRINACHLKQSRPMRSMTVGDDGSVVFYQG 190 (615)
T ss_dssp CEEEEEECTTSSEEEEEECCSSCSEEEEETT-TC-CEEEECCS-----CSSCEEEEEECSSSSCEEEEEETTTEEEEEET
T ss_pred cEEEEEEeCCCCEEEEeccCCCCccEEEEEE-CC-Ccceeeec-----CCccEEEEEECCCCCcEEEEEeCCCcEEEEeC
Confidence 467888999888655543321 2444433 11 00000011 112356899999987 7777777899999995
Q ss_pred CC---cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCC-CeEEEEECCCCeEEEEECCCCceee-C-----CCCCC
Q 011014 160 TG---VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSS-CSLLVIDRGNQAIREIQLHDDDCSD-N-----YDDTF 229 (495)
Q Consensus 160 ~G---V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~-G~LyVaD~gN~rI~~~d~~g~~~~~-~-----~~~g~ 229 (495)
.. +.++.+... .-.....++ ..++ +.++++-..++.|+.+++....+.. . ...+.
T Consensus 191 ~~~~~~~~~~~~~~--------------~~~~v~~~~-~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~ 255 (615)
T 1pgu_A 191 PPFKFSASDRTHHK--------------QGSFVRDVE-FSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGG 255 (615)
T ss_dssp TTBEEEEEECSSSC--------------TTCCEEEEE-ECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSC
T ss_pred CCcceeeeecccCC--------------CCceEEEEE-ECCCCCCEEEEEeCCCeEEEEECCCCCEeEEecccccccCCc
Confidence 44 344422100 000234556 4555 6666666567888888876655432 2 22223
Q ss_pred cceEEEEecCcCeEEEEEccCCce
Q 011014 230 HLGIFVLVAAAFFGYMLALLQRRV 253 (495)
Q Consensus 230 P~GIAvd~~a~~~~yv~d~~~~Rv 253 (495)
-..+++. .....++......|
T Consensus 256 v~~~~~~---~~~~l~~~~~d~~i 276 (615)
T 1pgu_A 256 IFALSWL---DSQKFATVGADATI 276 (615)
T ss_dssp EEEEEES---SSSEEEEEETTSEE
T ss_pred eEEEEEc---CCCEEEEEcCCCcE
Confidence 4455554 23334444444555
No 236
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=57.81 E-value=1.5e+02 Score=31.20 Aligned_cols=65 Identities=9% Similarity=-0.013 Sum_probs=33.2
Q ss_pred CceEEEEcCCCcEEEEECCCCeeEEEEcCCCCcccc-ccCCCcCccccCCcceEEEcCCCCEEEEECCCCEEEEEcC
Q 011014 84 EPFSVAVSPSGELLVLDSENNSRPKLVAGSPEGYYG-HVDGRPRGARMNHPKGLAVDDRGNIYIADTMNMAIRKISD 159 (495)
Q Consensus 84 ~P~GIAVd~dG~LyVaDs~n~~ii~ivaGs~~g~~G-~~dG~~~~a~f~~P~GIAVD~dGnIYVAD~~N~rIrk~d~ 159 (495)
.+..+++++|+.|+++.. . .+.++.-.. +..- .... -.....++++++|+.++. ..++.|++++.
T Consensus 83 ~v~~~~~spd~~~~~~~~--~-~i~~~d~~~-~~~~~l~~~------~~~~~~~~~SpdG~~la~-~~~~~i~v~~~ 148 (706)
T 2z3z_A 83 PSFRTLDAGRGLVVLFTQ--G-GLVGFDMLA-RKVTYLFDT------NEETASLDFSPVGDRVAY-VRNHNLYIARG 148 (706)
T ss_dssp CCEEEEETTTTEEEEEET--T-EEEEEETTT-TEEEEEECC------TTCCTTCEECTTSSEEEE-EETTEEEEEEC
T ss_pred CceeEEECCCCeEEEEEC--C-EEEEEECCC-CceEEccCC------cccccCCcCCCCCCEEEE-EECCeEEEEec
Confidence 477888888866655532 2 344433111 1100 0000 012456788888873333 23577888873
No 237
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=57.44 E-value=1.3e+02 Score=28.35 Aligned_cols=150 Identities=9% Similarity=0.100 Sum_probs=73.7
Q ss_pred CceEEEEcC-CCcEEEEECCCCeeEEEEcC-CC--Cccccc-----cCCCcCccccCCcceEEEcC-CCCEEEEECCCCE
Q 011014 84 EPFSVAVSP-SGELLVLDSENNSRPKLVAG-SP--EGYYGH-----VDGRPRGARMNHPKGLAVDD-RGNIYIADTMNMA 153 (495)
Q Consensus 84 ~P~GIAVd~-dG~LyVaDs~n~~ii~ivaG-s~--~g~~G~-----~dG~~~~a~f~~P~GIAVD~-dGnIYVAD~~N~r 153 (495)
.-..|++++ +|+++++-..++ .+++..- +. ....-. .........-.....|++.+ +++++++=..++.
T Consensus 45 ~v~~~~~s~~~~~~l~~~~~dg-~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~ 123 (408)
T 4a11_B 45 GINTLDIEPVEGRYMLSGGSDG-VIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFDKT 123 (408)
T ss_dssp CEEEEEECTTTCCEEEEEETTS-CEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETTSE
T ss_pred cEEEEEEecCCCCEEEEEcCCC-eEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeCCCe
Confidence 346788888 787666654444 3444321 11 000000 00000001223456889988 6667777667889
Q ss_pred EEEEcCCC---cEEEecCcccCCCCCCCCCCcCcccCCCceEEEEC--CCCeEEEEECCCCeEEEEECCCCceee--CCC
Q 011014 154 IRKISDTG---VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVG--SSCSLLVIDRGNQAIREIQLHDDDCSD--NYD 226 (495)
Q Consensus 154 Irk~d~~G---V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd--~~G~LyVaD~gN~rI~~~d~~g~~~~~--~~~ 226 (495)
|+.++... +..+.... ....+++.. .++.++++-..++.|+.+++....+.. ...
T Consensus 124 i~iwd~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~ 185 (408)
T 4a11_B 124 LKVWDTNTLQTADVFNFEE------------------TVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGH 185 (408)
T ss_dssp EEEEETTTTEEEEEEECSS------------------CEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCC
T ss_pred EEEeeCCCCccceeccCCC------------------ceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCC
Confidence 99999544 23331100 112222211 133355555556677777776544321 222
Q ss_pred CCCcceEEEEecCcCeEEEEEccCCce
Q 011014 227 DTFHLGIFVLVAAAFFGYMLALLQRRV 253 (495)
Q Consensus 227 ~g~P~GIAvd~~a~~~~yv~d~~~~Rv 253 (495)
.+.-..+++... +..+.++....+.|
T Consensus 186 ~~~v~~~~~~~~-~~~ll~~~~~dg~i 211 (408)
T 4a11_B 186 RQEILAVSWSPR-YDYILATASADSRV 211 (408)
T ss_dssp CSCEEEEEECSS-CTTEEEEEETTSCE
T ss_pred CCcEEEEEECCC-CCcEEEEEcCCCcE
Confidence 333456666542 22356666666666
No 238
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=57.26 E-value=1.4e+02 Score=33.32 Aligned_cols=71 Identities=6% Similarity=-0.053 Sum_probs=40.9
Q ss_pred EEEEcCCCcEEEEECCCCeeEEEEc-CCCCccc-c-c-cCCC--cCccccCCcceEEEcCCCCEEEEECCCCEEEEEc
Q 011014 87 SVAVSPSGELLVLDSENNSRPKLVA-GSPEGYY-G-H-VDGR--PRGARMNHPKGLAVDDRGNIYIADTMNMAIRKIS 158 (495)
Q Consensus 87 GIAVd~dG~LyVaDs~n~~ii~iva-Gs~~g~~-G-~-~dG~--~~~a~f~~P~GIAVD~dGnIYVAD~~N~rIrk~d 158 (495)
.|++.++|+++++-+... .+++.. ....-.. . . .+-. .....-.....|+++++|.++++=...+.|+.++
T Consensus 440 sv~~spdg~~laSgs~Dg-tVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~DgtV~lwd 516 (902)
T 2oaj_A 440 QKLPAEYGTAFITGHSNG-SVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIETGDVVLFK 516 (902)
T ss_dssp CCCCCSEEEEEEEEETTS-EEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEETTSCEEEEE
T ss_pred cccccccCcEEEEecCCC-cEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecCCCCeEEEEecCcEEEEEE
Confidence 456678888888877666 555553 2211000 0 0 0000 0001112467999999999888777788888887
No 239
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=56.91 E-value=93 Score=31.38 Aligned_cols=121 Identities=10% Similarity=-0.089 Sum_probs=65.5
Q ss_pred CceEEEEcCCCcEEEE---ECCCCeeEEEEcCCCCcccccc-C-CC-----cCccccCCcceEEEcCC-CCEEEEECCCC
Q 011014 84 EPFSVAVSPSGELLVL---DSENNSRPKLVAGSPEGYYGHV-D-GR-----PRGARMNHPKGLAVDDR-GNIYIADTMNM 152 (495)
Q Consensus 84 ~P~GIAVd~dG~LyVa---Ds~n~~ii~ivaGs~~g~~G~~-d-G~-----~~~a~f~~P~GIAVD~d-GnIYVAD~~N~ 152 (495)
....|+++++|+++++ -....+.+++..-.. +..+.. . .. .....-....+|++.++ ++++++=..++
T Consensus 94 ~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~-~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg 172 (434)
T 2oit_A 94 PIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRT-FSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADG 172 (434)
T ss_dssp CEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHH-HHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTS
T ss_pred cccEEEEcCCCCEEEEEEeccCCCceEEEEEccc-cccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCC
Confidence 4789999999986663 223334566653110 000000 0 00 00001124568999987 78888767788
Q ss_pred EEEEEcC-CCcEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCce
Q 011014 153 AIRKISD-TGVTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDC 221 (495)
Q Consensus 153 rIrk~d~-~GV~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~gN~rI~~~d~~g~~~ 221 (495)
.|+.+|. .+...+.-. + .-....+++ ..++|..+++-..++.|+.++..+...
T Consensus 173 ~v~iwD~~~~~~~~~~~--~-------------~~~~v~~v~-wspdg~~lasgs~dg~v~iwd~~~~~~ 226 (434)
T 2oit_A 173 SIAVLQVTETVKVCATL--P-------------STVAVTSVC-WSPKGKQLAVGKQNGTVVQYLPTLQEK 226 (434)
T ss_dssp CEEEEEESSSEEEEEEE--C-------------GGGCEEEEE-ECTTSSCEEEEETTSCEEEECTTCCEE
T ss_pred eEEEEEcCCCcceeecc--C-------------CCCceeEEE-EcCCCCEEEEEcCCCcEEEEccCCccc
Confidence 9999984 442221100 0 001345666 455666555555677888888875443
No 240
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=56.61 E-value=2e+02 Score=30.43 Aligned_cols=115 Identities=13% Similarity=0.118 Sum_probs=60.0
Q ss_pred CceEEEEcCCCcEEEEECCCCeeEEEEcCCCC-ccccccCCCcCccccCCcceEEEcC-CCCEEEEECCCCEEEEEcCC-
Q 011014 84 EPFSVAVSPSGELLVLDSENNSRPKLVAGSPE-GYYGHVDGRPRGARMNHPKGLAVDD-RGNIYIADTMNMAIRKISDT- 160 (495)
Q Consensus 84 ~P~GIAVd~dG~LyVaDs~n~~ii~ivaGs~~-g~~G~~dG~~~~a~f~~P~GIAVD~-dGnIYVAD~~N~rIrk~d~~- 160 (495)
....+++.++|..+++-..+. .+++..-... .......+ .-.....+++++ +|+++++-..++.|+.++..
T Consensus 99 ~v~~~~~s~~~~~l~~~~~dg-~i~vw~~~~~~~~~~~~~~-----~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~ 172 (814)
T 3mkq_A 99 YIRSIAVHPTKPYVLSGSDDL-TVKLWNWENNWALEQTFEG-----HEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQ 172 (814)
T ss_dssp CEEEEEECSSSSEEEEEETTS-EEEEEEGGGTSEEEEEEEC-----CSSCEEEEEEETTEEEEEEEEETTSEEEEEETTC
T ss_pred CEEEEEEeCCCCEEEEEcCCC-EEEEEECCCCceEEEEEcC-----CCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCC
Confidence 467888888887555544443 4444421100 00000000 112346889998 78877777778899999943
Q ss_pred C--cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECC--CCeEEEEECCCCeEEEEECCCCce
Q 011014 161 G--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGS--SCSLLVIDRGNQAIREIQLHDDDC 221 (495)
Q Consensus 161 G--V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~--~G~LyVaD~gN~rI~~~d~~g~~~ 221 (495)
+ ..++..... .....++ ... ++.++++-..++.|+.++.....+
T Consensus 173 ~~~~~~~~~~~~----------------~~v~~~~-~~~~~~~~~l~~~~~dg~i~~~d~~~~~~ 220 (814)
T 3mkq_A 173 STPNFTLTTGQE----------------RGVNYVD-YYPLPDKPYMITASDDLTIKIWDYQTKSC 220 (814)
T ss_dssp SSCSEEEECCCT----------------TCCCEEE-ECCSTTCCEEEEECTTSEEEEEETTTTEE
T ss_pred CcceeEEecCCC----------------CCEEEEE-EEECCCCCEEEEEeCCCEEEEEECCCCcE
Confidence 3 444432210 1122333 233 455555555556666666555443
No 241
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=56.55 E-value=1.3e+02 Score=28.33 Aligned_cols=71 Identities=13% Similarity=0.070 Sum_probs=42.8
Q ss_pred ceEEEEcCCCcEEEEECCCCeeEEEEcCCCCccccccCCCcCccccCCcceEEEcCCCCEEEEECCCCEEEEEcCCC
Q 011014 85 PFSVAVSPSGELLVLDSENNSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMNMAIRKISDTG 161 (495)
Q Consensus 85 P~GIAVd~dG~LyVaDs~n~~ii~ivaGs~~g~~G~~dG~~~~a~f~~P~GIAVD~dGnIYVAD~~N~rIrk~d~~G 161 (495)
-..|+++++|.++++-+... .+++..-..........+ .-..-..|+++++|+.+++=...+.|+.++..+
T Consensus 79 V~~~~~~~~~~~l~s~s~D~-~v~lwd~~~~~~~~~~~~-----h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~ 149 (343)
T 2xzm_R 79 VSDLALSQENCFAISSSWDK-TLRLWDLRTGTTYKRFVG-----HQSEVYSVAFSPDNRQILSAGAEREIKLWNILG 149 (343)
T ss_dssp EEEEEECSSTTEEEEEETTS-EEEEEETTSSCEEEEEEC-----CCSCEEEEEECSSTTEEEEEETTSCEEEEESSS
T ss_pred eEEEEECCCCCEEEEEcCCC-cEEEEECCCCcEEEEEcC-----CCCcEEEEEECCCCCEEEEEcCCCEEEEEeccC
Confidence 46788888888877766555 455543211000000000 112345899999998777766788899998654
No 242
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=55.11 E-value=1.3e+02 Score=27.73 Aligned_cols=103 Identities=15% Similarity=0.108 Sum_probs=58.2
Q ss_pred cceEEEcCC---CCEEEEECCCCEEEEEcCC--C--c-EEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEE
Q 011014 133 PKGLAVDDR---GNIYIADTMNMAIRKISDT--G--V-TTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVI 204 (495)
Q Consensus 133 P~GIAVD~d---GnIYVAD~~N~rIrk~d~~--G--V-~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVa 204 (495)
-..|+++++ |+++++=..++.|++++.+ + + .++.+.. ..-..++ ..+++.++++
T Consensus 42 v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~-----------------~~v~~~~-~~~~~~~l~s 103 (368)
T 3mmy_A 42 IGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHT-----------------GPVLDVC-WSDDGSKVFT 103 (368)
T ss_dssp EEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECS-----------------SCEEEEE-ECTTSSEEEE
T ss_pred eEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEecccc-----------------CCEEEEE-ECcCCCEEEE
Confidence 458899988 5777766667888888832 4 2 3332211 1233455 4556655555
Q ss_pred ECCCCeEEEEECCCCceeeC-CCCCCcceEEEEecCcCeEEEEEccCCce
Q 011014 205 DRGNQAIREIQLHDDDCSDN-YDDTFHLGIFVLVAAAFFGYMLALLQRRV 253 (495)
Q Consensus 205 D~gN~rI~~~d~~g~~~~~~-~~~g~P~GIAvd~~a~~~~yv~d~~~~Rv 253 (495)
-..++.|+.++.....+... ...+.-..+++.....+...++......|
T Consensus 104 ~~~dg~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i 153 (368)
T 3mmy_A 104 ASCDKTAKMWDLSSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTL 153 (368)
T ss_dssp EETTSEEEEEETTTTEEEEEEECSSCEEEEEEEECSSCEEEEEEETTSEE
T ss_pred EcCCCcEEEEEcCCCCceeeccccCceEEEEEEeCCCCCEEEEccCCCcE
Confidence 55667788888777665432 22223456666222244555555555556
No 243
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=54.60 E-value=2.8e+02 Score=31.38 Aligned_cols=34 Identities=9% Similarity=0.026 Sum_probs=24.1
Q ss_pred CceEEEECCCCeEEEEECCCCeEEEEECCCCceee
Q 011014 189 DFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCSD 223 (495)
Q Consensus 189 P~gVa~vd~~G~LyVaD~gN~rI~~~d~~g~~~~~ 223 (495)
-.+++ ..++|..+++-..++.|+.++.....+..
T Consensus 1006 v~~l~-~s~dg~~l~s~~~dg~i~vwd~~~~~~~~ 1039 (1249)
T 3sfz_A 1006 VRHIQ-FTADGKTLISSSEDSVIQVWNWQTGDYVF 1039 (1249)
T ss_dssp CCCEE-ECSSSSCEEEECSSSBEEEEETTTTEEEC
T ss_pred eEEEE-ECCCCCEEEEEcCCCEEEEEECCCCceEE
Confidence 34566 56777777777777888888888766654
No 244
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=52.58 E-value=1.8e+02 Score=28.69 Aligned_cols=140 Identities=16% Similarity=0.146 Sum_probs=69.1
Q ss_pred CceEEEEcCCCc-EEEEECCC-CeeEEEEcCCCCccccccCCCcCccccCCcceEEEcCCCC-EEEEEC--CCCEEEEEc
Q 011014 84 EPFSVAVSPSGE-LLVLDSEN-NSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGN-IYIADT--MNMAIRKIS 158 (495)
Q Consensus 84 ~P~GIAVd~dG~-LyVaDs~n-~~ii~ivaGs~~g~~G~~dG~~~~a~f~~P~GIAVD~dGn-IYVAD~--~N~rIrk~d 158 (495)
....++++|||. |+.+...+ ...+.+..-.. +..-...+ .-.....++++++|+ |+++-. ++..|+.++
T Consensus 180 ~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~t-g~~~~l~~-----~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d 253 (415)
T 2hqs_A 180 PLMSPAWSPDGSKLAYVTFESGRSALVIQTLAN-GAVRQVAS-----FPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMD 253 (415)
T ss_dssp CEEEEEECTTSSEEEEEECTTSSCEEEEEETTT-CCEEEEEC-----CSSCEEEEEECTTSSEEEEEECTTSSCEEEEEE
T ss_pred cceeeEEcCCCCEEEEEEecCCCcEEEEEECCC-CcEEEeec-----CCCcccCEEEcCCCCEEEEEEecCCCceEEEEE
Confidence 457789999997 44444332 22444443211 11000000 001346899999998 554433 356799999
Q ss_pred CC-C-cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCe-EEEEEC--CCCeEEEEECCCCceeeCCCC-CCcce
Q 011014 159 DT-G-VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCS-LLVIDR--GNQAIREIQLHDDDCSDNYDD-TFHLG 232 (495)
Q Consensus 159 ~~-G-V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~-LyVaD~--gN~rI~~~d~~g~~~~~~~~~-g~P~G 232 (495)
.. + +..+.+.. .....++ ..++|. |+++.. +..+|+.+++.+..+...... +....
T Consensus 254 ~~~~~~~~l~~~~-----------------~~~~~~~-~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~ 315 (415)
T 2hqs_A 254 LASGQIRQVTDGR-----------------SNNTEPT-WFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWEGSQNQD 315 (415)
T ss_dssp TTTCCEEECCCCS-----------------SCEEEEE-ECTTSSEEEEEECTTSSCEEEEEETTSSCCEECCCSSSEEEE
T ss_pred CCCCCEEeCcCCC-----------------CcccceE-ECCCCCEEEEEECCCCCcEEEEEECCCCCEEEEecCCCcccC
Confidence 54 3 33332210 1223455 355554 554432 334788888887665433222 22344
Q ss_pred EEEEecCcCeEEEEEc
Q 011014 233 IFVLVAAAFFGYMLAL 248 (495)
Q Consensus 233 IAvd~~a~~~~yv~d~ 248 (495)
+++... +..++++..
T Consensus 316 ~~~spd-G~~l~~~~~ 330 (415)
T 2hqs_A 316 ADVSSD-GKFMVMVSS 330 (415)
T ss_dssp EEECTT-SSEEEEEEE
T ss_pred eEECCC-CCEEEEEEC
Confidence 555432 234444443
No 245
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=52.33 E-value=1.8e+02 Score=31.37 Aligned_cols=147 Identities=11% Similarity=-0.029 Sum_probs=77.4
Q ss_pred CceEEEEcCC--CcEEEEECCCCeeEEEEcCCCC---ccccccCCCcCccccCCcceEEEcC-------------CCCEE
Q 011014 84 EPFSVAVSPS--GELLVLDSENNSRPKLVAGSPE---GYYGHVDGRPRGARMNHPKGLAVDD-------------RGNIY 145 (495)
Q Consensus 84 ~P~GIAVd~d--G~LyVaDs~n~~ii~ivaGs~~---g~~G~~dG~~~~a~f~~P~GIAVD~-------------dGnIY 145 (495)
.-..+++.++ |+++++-..+. .+++..-... ..... . ..-.....|++++ +|+++
T Consensus 101 ~V~~v~~sp~~~~~~l~sgs~dg-~I~vwdl~~~~~~~~~~~-~-----~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l 173 (753)
T 3jro_A 101 SVNSVQWAPHEYGPLLLVASSDG-KVSVVEFKENGTTSPIII-D-----AHAIGVNSASWAPATIEEDGEHNGTKESRKF 173 (753)
T ss_dssp CEEEEEECCGGGCSEEEEEETTS-EEEEEECCSSSCCCCEEE-E-----CCSSCEEEEEECCCC---------CGGGCCE
T ss_pred CeEEEEECCCCCCCEEEEEeCCC-cEEEEEeecCCCcceeEe-e-----cCCCceEEEEecCcccccccccccCCCCCEE
Confidence 4578888887 77766665554 4455431110 00000 0 0112334677776 47777
Q ss_pred EEECCCCEEEEEcCC-C--cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCC---CeEEEEECCCCeEEEEECCCC
Q 011014 146 IADTMNMAIRKISDT-G--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSS---CSLLVIDRGNQAIREIQLHDD 219 (495)
Q Consensus 146 VAD~~N~rIrk~d~~-G--V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~---G~LyVaD~gN~rI~~~d~~g~ 219 (495)
++-..++.|+.+|.. + ...+.....+ .-....+++ ..++ +.++++-...+.|+.++....
T Consensus 174 ~sgs~dg~I~iwd~~~~~~~~~~~~~~~~-------------h~~~V~~l~-~sp~~~~~~~l~s~s~Dg~I~iwd~~~~ 239 (753)
T 3jro_A 174 VTGGADNLVKIWKYNSDAQTYVLESTLEG-------------HSDWVRDVA-WSPTVLLRSYLASVSQDRTCIIWTQDNE 239 (753)
T ss_dssp EEEETTSCEEEEEEETTTTEEEEEEEECC-------------CSSCEEEEE-ECCCCSSSEEEEEEESSSCEEEEEESSS
T ss_pred EEEECCCeEEEEeccCCcccceeeeeecC-------------CCCcEEEEE-eccCCCCCCEEEEEecCCEEEEecCCCC
Confidence 776678889988832 2 1111110000 011234566 4555 777777777888999988774
Q ss_pred ce------ee-CCCCCCcceEEEEecCcCeEEEEEccCCce
Q 011014 220 DC------SD-NYDDTFHLGIFVLVAAAFFGYMLALLQRRV 253 (495)
Q Consensus 220 ~~------~~-~~~~g~P~GIAvd~~a~~~~yv~d~~~~Rv 253 (495)
.. .. ....+....+++.. .+...++....+.|
T Consensus 240 ~~~~~~~~~~~~~~~~~v~~l~~sp--dg~~l~s~s~Dg~I 278 (753)
T 3jro_A 240 QGPWKKTLLKEEKFPDVLWRASWSL--SGNVLALSGGDNKV 278 (753)
T ss_dssp SSCCBCCBSSSSCCSSCCCCEEECT--TTCCEEEECSSSCE
T ss_pred CCcceeEEeccCCCCCceEEEEEcC--CCCEEEEEcCCCEE
Confidence 21 11 11223346677765 33445555556666
No 246
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=49.54 E-value=1.7e+02 Score=27.50 Aligned_cols=150 Identities=17% Similarity=0.092 Sum_probs=76.9
Q ss_pred CceEEEEcCCCcEEEEECCCCeeEEEEcCCCCccccccCCCc---CccccCCcceEEEcCCCCEEEEECCCCEEEEEcC-
Q 011014 84 EPFSVAVSPSGELLVLDSENNSRPKLVAGSPEGYYGHVDGRP---RGARMNHPKGLAVDDRGNIYIADTMNMAIRKISD- 159 (495)
Q Consensus 84 ~P~GIAVd~dG~LyVaDs~n~~ii~ivaGs~~g~~G~~dG~~---~~a~f~~P~GIAVD~dGnIYVAD~~N~rIrk~d~- 159 (495)
.-..|++.++|+++++-+... .+++..-.... ........ ....-..-..|+++++|+++++=...+.|+.++.
T Consensus 60 ~v~~v~~sp~~~~las~s~D~-~v~iw~~~~~~-~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~ 137 (330)
T 2hes_X 60 AIRSVAWRPHTSLLAAGSFDS-TVSIWAKEESA-DRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETD 137 (330)
T ss_dssp CEEEEEECTTSSEEEEEETTS-CEEEEEC--------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECC
T ss_pred CEEEEEECCCCCEEEEEeCCC-cEEEEEcccCc-CccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEecc
Confidence 356889999998777765554 44544211000 00000000 0001123458999999998887777888999885
Q ss_pred C-C-----cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCC--cee-e-CCCCCC
Q 011014 160 T-G-----VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDD--DCS-D-NYDDTF 229 (495)
Q Consensus 160 ~-G-----V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~gN~rI~~~d~~g~--~~~-~-~~~~g~ 229 (495)
. + +.++.+- -..-..|+ ..+++.++++-...+.|+.++.... .+. . ....+.
T Consensus 138 ~~~~~~~~~~~~~~h-----------------~~~v~~v~-~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~ 199 (330)
T 2hes_X 138 ESGEEYECISVLQEH-----------------SQDVKHVI-WHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGT 199 (330)
T ss_dssp TTCCCCEEEEEECCC-----------------SSCEEEEE-ECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSC
T ss_pred CCCCCeEEEEEeccC-----------------CCceEEEE-ECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCc
Confidence 2 2 1222110 01223455 4566777777666778888776543 222 1 222223
Q ss_pred cceEEEEecCcCeEEEEEccCCce
Q 011014 230 HLGIFVLVAAAFFGYMLALLQRRV 253 (495)
Q Consensus 230 P~GIAvd~~a~~~~yv~d~~~~Rv 253 (495)
-..+++.........++....+.|
T Consensus 200 v~~~~~~~~~~~~~l~s~s~D~~v 223 (330)
T 2hes_X 200 VWSSDFDKTEGVFRLCSGSDDSTV 223 (330)
T ss_dssp EEEEEECCSSSSCEEEEEETTSCE
T ss_pred EEEEEecCCCCeeEEEEEeCCCeE
Confidence 345555542223344555555555
No 247
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=49.25 E-value=2.6e+02 Score=29.44 Aligned_cols=26 Identities=0% Similarity=-0.202 Sum_probs=19.2
Q ss_pred cceEEEcCCCC-EEEEECCCCEEEEEcCC
Q 011014 133 PKGLAVDDRGN-IYIADTMNMAIRKISDT 160 (495)
Q Consensus 133 P~GIAVD~dGn-IYVAD~~N~rIrk~d~~ 160 (495)
...+++++||+ |+++.. +.|++++.+
T Consensus 111 v~~~~~SpDg~~l~~~~~--~~i~~~d~~ 137 (741)
T 2ecf_A 111 IVDYQWSPDAQRLLFPLG--GELYLYDLK 137 (741)
T ss_dssp SCCCEECTTSSEEEEEET--TEEEEEESS
T ss_pred cceeEECCCCCEEEEEeC--CcEEEEECC
Confidence 46889999998 555543 788888854
No 248
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=48.11 E-value=1.4e+02 Score=27.45 Aligned_cols=100 Identities=4% Similarity=-0.101 Sum_probs=58.4
Q ss_pred cceEEEcCCCCEEEEECCCCEEEEEcC--CC----cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCe-EEEEE
Q 011014 133 PKGLAVDDRGNIYIADTMNMAIRKISD--TG----VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCS-LLVID 205 (495)
Q Consensus 133 P~GIAVD~dGnIYVAD~~N~rIrk~d~--~G----V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~-LyVaD 205 (495)
-..|+++++|+++++=...+.|++++. .. +..+.+. -.....+++ .+++. ++++-
T Consensus 14 v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~-----------------~~~v~~~~~-~~~~~~~l~~~ 75 (342)
T 1yfq_A 14 ISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRY-----------------KHPLLCCNF-IDNTDLQIYVG 75 (342)
T ss_dssp EEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEEC-----------------SSCEEEEEE-EESSSEEEEEE
T ss_pred EEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeec-----------------CCceEEEEE-CCCCCcEEEEE
Confidence 458899999886666666788888883 22 2222111 012345664 44556 44444
Q ss_pred CCCCeEEEEEC-CCCceeeCCC---CCCcceEEEEecCcCeEEEEEccCCce
Q 011014 206 RGNQAIREIQL-HDDDCSDNYD---DTFHLGIFVLVAAAFFGYMLALLQRRV 253 (495)
Q Consensus 206 ~gN~rI~~~d~-~g~~~~~~~~---~g~P~GIAvd~~a~~~~yv~d~~~~Rv 253 (495)
..++.|+.++. .+..+..... .+.-..+++.. ....++......|
T Consensus 76 ~~dg~i~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~---~~~l~s~~~d~~i 124 (342)
T 1yfq_A 76 TVQGEILKVDLIGSPSFQALTNNEANLGICRICKYG---DDKLIAASWDGLI 124 (342)
T ss_dssp ETTSCEEEECSSSSSSEEECBSCCCCSCEEEEEEET---TTEEEEEETTSEE
T ss_pred cCCCeEEEEEeccCCceEeccccCCCCceEEEEeCC---CCEEEEEcCCCeE
Confidence 46678999988 7766554333 23345666664 3345555556666
No 249
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=47.18 E-value=1.6e+02 Score=26.46 Aligned_cols=142 Identities=11% Similarity=0.028 Sum_probs=69.1
Q ss_pred CceEEEEcCCCcEEEEECCCCeeEEEEc-CCCC-cc-ccccCCCcCccccCCcceEEEcCCCCEEEEECCCCEEEEEcCC
Q 011014 84 EPFSVAVSPSGELLVLDSENNSRPKLVA-GSPE-GY-YGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMNMAIRKISDT 160 (495)
Q Consensus 84 ~P~GIAVd~dG~LyVaDs~n~~ii~iva-Gs~~-g~-~G~~dG~~~~a~f~~P~GIAVD~dGnIYVAD~~N~rIrk~d~~ 160 (495)
....++++++|+++++-..+. .+.+.. -... +. ..... ..-..-..|++ +++++++=..++.|+.++..
T Consensus 61 ~v~~~~~~~~~~~l~~~~~dg-~i~~~~~~~~~~~~~~~~~~-----~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d~~ 132 (313)
T 3odt_A 61 FLNSVCYDSEKELLLFGGKDT-MINGVPLFATSGEDPLYTLI-----GHQGNVCSLSF--QDGVVISGSWDKTAKVWKEG 132 (313)
T ss_dssp CEEEEEEETTTTEEEEEETTS-CEEEEETTCCTTSCC-CEEC-----CCSSCEEEEEE--ETTEEEEEETTSEEEEEETT
T ss_pred cEEEEEECCCCCEEEEecCCC-eEEEEEeeecCCCCcccchh-----hcccCEEEEEe--cCCEEEEEeCCCCEEEEcCC
Confidence 467889999988776665554 333332 1110 00 00000 01122346677 35566665668889999833
Q ss_pred C-cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCceeeCC-CCCCcceEEEEec
Q 011014 161 G-VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCSDNY-DDTFHLGIFVLVA 238 (495)
Q Consensus 161 G-V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~gN~rI~~~d~~g~~~~~~~-~~g~P~GIAvd~~ 238 (495)
. +..+.+.. .....+++...++.++++-..++.|+.++.......... ..+....+++..
T Consensus 133 ~~~~~~~~~~-----------------~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~- 194 (313)
T 3odt_A 133 SLVYNLQAHN-----------------ASVWDAKVVSFSENKFLTASADKTIKLWQNDKVIKTFSGIHNDVVRHLAVVD- 194 (313)
T ss_dssp EEEEEEECCS-----------------SCEEEEEEEETTTTEEEEEETTSCEEEEETTEEEEEECSSCSSCEEEEEEEE-
T ss_pred cEEEecccCC-----------------CceeEEEEccCCCCEEEEEECCCCEEEEecCceEEEEeccCcccEEEEEEcC-
Confidence 3 34442211 122334444434455555555667777773332222222 333445666654
Q ss_pred CcCeEEEEEccCCce
Q 011014 239 AAFFGYMLALLQRRV 253 (495)
Q Consensus 239 a~~~~yv~d~~~~Rv 253 (495)
.+. +++......|
T Consensus 195 -~~~-~~~~~~dg~i 207 (313)
T 3odt_A 195 -DGH-FISCSNDGLI 207 (313)
T ss_dssp -TTE-EEEEETTSEE
T ss_pred -CCe-EEEccCCCeE
Confidence 233 4455555555
No 250
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=46.75 E-value=2e+02 Score=27.44 Aligned_cols=51 Identities=12% Similarity=0.059 Sum_probs=31.8
Q ss_pred CCeEEEEECCCCeEEEEECCCCceeeCCCCCCcceEEEEecCcCeEEEEEccCCce
Q 011014 198 SCSLLVIDRGNQAIREIQLHDDDCSDNYDDTFHLGIFVLVAAAFFGYMLALLQRRV 253 (495)
Q Consensus 198 ~G~LyVaD~gN~rI~~~d~~g~~~~~~~~~g~P~GIAvd~~a~~~~yv~d~~~~Rv 253 (495)
++.||+... ++.|..+++...........+...+++++ +..+|++.. ..+|
T Consensus 239 ~~~v~~~~~-~g~l~~~d~~tG~~~w~~~~~~~~~~~~~---~~~l~~~~~-~g~l 289 (376)
T 3q7m_A 239 NGVVFALAY-NGNLTALDLRSGQIMWKRELGSVNDFIVD---GNRIYLVDQ-NDRV 289 (376)
T ss_dssp TTEEEEECT-TSCEEEEETTTCCEEEEECCCCEEEEEEE---TTEEEEEET-TCCE
T ss_pred CCEEEEEec-CcEEEEEECCCCcEEeeccCCCCCCceEE---CCEEEEEcC-CCeE
Confidence 468888764 57889999865544432223334556665 567888765 3455
No 251
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=44.75 E-value=2.1e+02 Score=27.09 Aligned_cols=147 Identities=15% Similarity=0.087 Sum_probs=79.7
Q ss_pred CceEEEEcCCCcEEEEECCCCeeEEEEc-CCCCcc-ccccCCCcCccccCCcceEEEcCCCCEEEEECCCCEEEEEcC-C
Q 011014 84 EPFSVAVSPSGELLVLDSENNSRPKLVA-GSPEGY-YGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMNMAIRKISD-T 160 (495)
Q Consensus 84 ~P~GIAVd~dG~LyVaDs~n~~ii~iva-Gs~~g~-~G~~dG~~~~a~f~~P~GIAVD~dGnIYVAD~~N~rIrk~d~-~ 160 (495)
.-..|+++++|+++++-+... .+++.. ...... .....+ .-..-..|++.++|+++++=...+.|+.++. .
T Consensus 63 ~v~~~~~sp~g~~l~s~s~D~-~v~iw~~~~~~~~~~~~~~~-----h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~ 136 (345)
T 3fm0_A 63 TVRKVAWSPCGNYLASASFDA-TTCIWKKNQDDFECVTTLEG-----HENEVKSVAWAPSGNLLATCSRDKSVWVWEVDE 136 (345)
T ss_dssp CEEEEEECTTSSEEEEEETTS-CEEEEEECCC-EEEEEEECC-----CSSCEEEEEECTTSSEEEEEETTSCEEEEEECT
T ss_pred cEEEEEECCCCCEEEEEECCC-cEEEEEccCCCeEEEEEccC-----CCCCceEEEEeCCCCEEEEEECCCeEEEEECCC
Confidence 456889999998777655444 333332 111000 000011 1123458999999998888777888888883 2
Q ss_pred C--c---EEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCce---ee-CCCCCCcc
Q 011014 161 G--V---TTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDC---SD-NYDDTFHL 231 (495)
Q Consensus 161 G--V---~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~gN~rI~~~d~~g~~~---~~-~~~~g~P~ 231 (495)
+ . .++.+. -..-..++ ..+++.++++-...+.|+.++...... .. ....+.-.
T Consensus 137 ~~~~~~~~~~~~h-----------------~~~v~~~~-~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~ 198 (345)
T 3fm0_A 137 EDEYECVSVLNSH-----------------TQDVKHVV-WHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVW 198 (345)
T ss_dssp TSCEEEEEEECCC-----------------CSCEEEEE-ECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEE
T ss_pred CCCeEEEEEecCc-----------------CCCeEEEE-ECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceE
Confidence 2 1 222110 01123455 456666666666667788887665432 12 22233346
Q ss_pred eEEEEecCcCeEEEEEccCCceEEEe
Q 011014 232 GIFVLVAAAFFGYMLALLQRRVQAMF 257 (495)
Q Consensus 232 GIAvd~~a~~~~yv~d~~~~Rv~~~~ 257 (495)
.+++.. .+...++....+.| +++
T Consensus 199 ~l~~sp--~g~~l~s~s~D~~v-~iW 221 (345)
T 3fm0_A 199 SLAFDP--SGQRLASCSDDRTV-RIW 221 (345)
T ss_dssp EEEECT--TSSEEEEEETTSCE-EEE
T ss_pred EEEECC--CCCEEEEEeCCCeE-EEe
Confidence 677765 34445666666666 455
No 252
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=44.33 E-value=2e+02 Score=26.66 Aligned_cols=118 Identities=11% Similarity=0.013 Sum_probs=63.0
Q ss_pred CCceEEEEcCC--CcEEEEECCCCeeEEEEcCCCC-ccccccCCCcCccccCCcceEEEcC-------------CCCEEE
Q 011014 83 MEPFSVAVSPS--GELLVLDSENNSRPKLVAGSPE-GYYGHVDGRPRGARMNHPKGLAVDD-------------RGNIYI 146 (495)
Q Consensus 83 ~~P~GIAVd~d--G~LyVaDs~n~~ii~ivaGs~~-g~~G~~dG~~~~a~f~~P~GIAVD~-------------dGnIYV 146 (495)
.....|++.++ |+++++-..+. .+++..-... ...-. .....-.....+++++ ++++++
T Consensus 102 ~~v~~~~~~~~~~~~~l~~~~~d~-~i~v~d~~~~~~~~~~----~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~ 176 (379)
T 3jrp_A 102 ASVNSVQWAPHEYGPLLLVASSDG-KVSVVEFKENGTTSPI----IIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFV 176 (379)
T ss_dssp SCEEEEEECCGGGCSEEEEEETTS-EEEEEECCTTSCCCEE----EEECCTTCEEEEEECCCC----------CTTCEEE
T ss_pred cceEEEEeCCCCCCCEEEEecCCC-cEEEEecCCCCceeeE----EecCCCCceEEEEEcCccccccccccCCCCCCEEE
Confidence 35678888887 77666655544 4444431110 00000 0000112235777877 588777
Q ss_pred EECCCCEEEEEcCC-C--cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCC---CeEEEEECCCCeEEEEECCCC
Q 011014 147 ADTMNMAIRKISDT-G--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSS---CSLLVIDRGNQAIREIQLHDD 219 (495)
Q Consensus 147 AD~~N~rIrk~d~~-G--V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~---G~LyVaD~gN~rI~~~d~~g~ 219 (495)
+-..++.|+.++.. + ...+.....+ .-....+++ ..++ +.++++-...+.|+.++....
T Consensus 177 ~~~~dg~i~i~d~~~~~~~~~~~~~~~~-------------h~~~v~~~~-~sp~~~~~~~l~s~~~dg~i~iwd~~~~ 241 (379)
T 3jrp_A 177 TGGADNLVKIWKYNSDAQTYVLESTLEG-------------HSDWVRDVA-WSPTVLLRSYLASVSQDRTCIIWTQDNE 241 (379)
T ss_dssp EEETTSCEEEEEEETTTTEEEEEEEECC-------------CSSCEEEEE-ECCCCSSSEEEEEEETTSCEEEEEESST
T ss_pred EEeCCCeEEEEEecCCCcceeeEEEEec-------------ccCcEeEEE-ECCCCCCCCeEEEEeCCCEEEEEeCCCC
Confidence 77778889988832 2 1111110000 011234566 4566 677777667788888888774
No 253
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=42.46 E-value=3.5e+02 Score=29.06 Aligned_cols=26 Identities=0% Similarity=-0.054 Sum_probs=16.7
Q ss_pred ECCCCeEEEEECCCCeEEEEECCCCce
Q 011014 195 VGSSCSLLVIDRGNQAIREIQLHDDDC 221 (495)
Q Consensus 195 vd~~G~LyVaD~gN~rI~~~d~~g~~~ 221 (495)
...++.||+. ...+.|+.||+....+
T Consensus 485 ~~~g~~v~~g-~~dg~l~a~D~~tG~~ 510 (677)
T 1kb0_A 485 TTAGNVVFQG-TADGRLVAYHAATGEK 510 (677)
T ss_dssp EETTTEEEEE-CTTSEEEEEETTTCCE
T ss_pred EeCCCEEEEE-CCCCcEEEEECCCCce
Confidence 3455667776 4567888888765444
No 254
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=41.22 E-value=4.1e+02 Score=29.53 Aligned_cols=111 Identities=12% Similarity=0.104 Sum_probs=62.6
Q ss_pred CceEEEEcCCCcEEEEECCCCeeEEEEcCCCCccccccCCCcCccccCCcceEEEcCCCCEEEEECCCCEEEEEcC-CC-
Q 011014 84 EPFSVAVSPSGELLVLDSENNSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMNMAIRKISD-TG- 161 (495)
Q Consensus 84 ~P~GIAVd~dG~LyVaDs~n~~ii~ivaGs~~g~~G~~dG~~~~a~f~~P~GIAVD~dGnIYVAD~~N~rIrk~d~-~G- 161 (495)
....|+++++|.++++-..+. .++++............. -..-..|++.+ |.++++=...+.|+++|- .+
T Consensus 19 ~V~~lafspdg~~lAsgs~Dg-~I~lw~~~~~~~~~~~~~------~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~~ 90 (902)
T 2oaj_A 19 KPIAAAFDFTQNLLAIATVTG-EVHIYGQQQVEVVIKLED------RSAIKEMRFVK-GIYLVVINAKDTVYVLSLYSQK 90 (902)
T ss_dssp CEEEEEEETTTTEEEEEETTS-EEEEECSTTCEEEEECSS------CCCEEEEEEET-TTEEEEEETTCEEEEEETTTCS
T ss_pred CcEEEEECCCCCEEEEEeCCC-EEEEEeCCCcEEEEEcCC------CCCEEEEEEcC-CCEEEEEECcCeEEEEECCCCc
Confidence 567899999999877766555 666664321100000000 01235889998 774444445789999994 34
Q ss_pred -cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCce
Q 011014 162 -VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDC 221 (495)
Q Consensus 162 -V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~gN~rI~~~d~~g~~~ 221 (495)
+.++... ..-..++ .++++..+++-..++.|+.+++.+..+
T Consensus 91 ~~~~~~~~------------------~~V~~v~-~sp~g~~l~sgs~dg~V~lwd~~~~~~ 132 (902)
T 2oaj_A 91 VLTTVFVP------------------GKITSID-TDASLDWMLIGLQNGSMIVYDIDRDQL 132 (902)
T ss_dssp EEEEEECS------------------SCEEEEE-CCTTCSEEEEEETTSCEEEEETTTTEE
T ss_pred EEEEEcCC------------------CCEEEEE-ECCCCCEEEEEcCCCcEEEEECCCCcc
Confidence 3444210 0123444 355555554444567777777776554
No 255
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=39.76 E-value=3.2e+02 Score=28.69 Aligned_cols=119 Identities=11% Similarity=0.051 Sum_probs=57.6
Q ss_pred CCcceEEEcCCCC-EEEEECCCC-----EEEEEcCC-C-cEEEecCcccCCCC----CCCCC-CcCccc---CCCceEEE
Q 011014 131 NHPKGLAVDDRGN-IYIADTMNM-----AIRKISDT-G-VTTIAGGKWSRGVG----HVDGP-SEDAKF---SNDFDVVY 194 (495)
Q Consensus 131 ~~P~GIAVD~dGn-IYVAD~~N~-----rIrk~d~~-G-V~tiaGg~~G~~~g----~~dG~-~~~a~f---~~P~gVa~ 194 (495)
..+..+++++||+ |+++....+ .|++++.+ | ...+.........+ ..... .....+ .....++
T Consensus 37 ~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~- 115 (741)
T 2ecf_A 37 PTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQ- 115 (741)
T ss_dssp CCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCE-
T ss_pred CCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeE-
Confidence 3577999999998 555544233 89999954 4 32232211100000 00000 000000 1134566
Q ss_pred ECCCCe-EEEEECCCCeEEEEECCCC---ceeeCCCC-CC-------cce--EEEEecCcCeEEEEEccCCceE
Q 011014 195 VGSSCS-LLVIDRGNQAIREIQLHDD---DCSDNYDD-TF-------HLG--IFVLVAAAFFGYMLALLQRRVQ 254 (495)
Q Consensus 195 vd~~G~-LyVaD~gN~rI~~~d~~g~---~~~~~~~~-g~-------P~G--IAvd~~a~~~~yv~d~~~~Rv~ 254 (495)
..++|. |+++.. +.|+.+++++. .+...... +. |.| |+... ...+|+.+.......
T Consensus 116 ~SpDg~~l~~~~~--~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~--~~~i~~~d~~~g~~~ 185 (741)
T 2ecf_A 116 WSPDAQRLLFPLG--GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR--GRNLWVIDLASGRQM 185 (741)
T ss_dssp ECTTSSEEEEEET--TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE--TTEEEEEETTTTEEE
T ss_pred ECCCCCEEEEEeC--CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe--CCcEEEEecCCCCEE
Confidence 456664 555553 78888988876 44332211 21 444 44333 446777776655543
No 256
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=38.81 E-value=2.8e+02 Score=26.94 Aligned_cols=29 Identities=21% Similarity=0.485 Sum_probs=18.4
Q ss_pred eEEEcCCCCEEEEECCCCEEEEEcC-CC--cEEE
Q 011014 135 GLAVDDRGNIYIADTMNMAIRKISD-TG--VTTI 165 (495)
Q Consensus 135 GIAVD~dGnIYVAD~~N~rIrk~d~-~G--V~ti 165 (495)
.+++ +++++++-..++.|+.+|. ++ +.++
T Consensus 324 ~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~ 355 (445)
T 2ovr_B 324 GMEL--KDNILVSGNADSTVKIWDIKTGQCLQTL 355 (445)
T ss_dssp EEEE--ETTEEEEEETTSCEEEEETTTCCEEEEE
T ss_pred EEEE--eCCEEEEEeCCCeEEEEECCCCcEEEEE
Confidence 4444 4566666666788888884 44 4444
No 257
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=38.54 E-value=2.5e+02 Score=26.28 Aligned_cols=70 Identities=16% Similarity=0.070 Sum_probs=42.2
Q ss_pred CceEEEEcCCCcEEEEECCCCeeEEEEcC-CC--Ccc-ccccCCCcCccccCCcceEEEcCCCCEEEEECCCCEEEEEcC
Q 011014 84 EPFSVAVSPSGELLVLDSENNSRPKLVAG-SP--EGY-YGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMNMAIRKISD 159 (495)
Q Consensus 84 ~P~GIAVd~dG~LyVaDs~n~~ii~ivaG-s~--~g~-~G~~dG~~~~a~f~~P~GIAVD~dGnIYVAD~~N~rIrk~d~ 159 (495)
.-..|+++++|+++++-+... .+++..- .. ... .....+ .-..-..|+++++|+++++=...+.|+.++.
T Consensus 109 ~V~~v~~sp~g~~las~s~D~-~v~iwd~~~~~~~~~~~~~~~~-----h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~ 182 (330)
T 2hes_X 109 EVKGVAWSNDGYYLATCSRDK-SVWIWETDESGEEYECISVLQE-----HSQDVKHVIWHPSEALLASSSYDDTVRIWKD 182 (330)
T ss_dssp CEEEEEECTTSCEEEEEETTS-CEEEEECCTTCCCCEEEEEECC-----CSSCEEEEEECSSSSEEEEEETTSCEEEEEE
T ss_pred cEEEEEECCCCCEEEEEeCCC-EEEEEeccCCCCCeEEEEEecc-----CCCceEEEEECCCCCEEEEEcCCCeEEEEEC
Confidence 356789999998777665544 4455432 11 000 000000 1123458899999998888777888988873
No 258
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=38.25 E-value=3.4e+02 Score=27.68 Aligned_cols=116 Identities=9% Similarity=-0.077 Sum_probs=58.9
Q ss_pred eEEEEcCCCcEEEEE---CCCCeeEEEEc-CCCCccccccCCCcCccccCCcceEEEcCCCC-EEEEECCC-CEEEEEcC
Q 011014 86 FSVAVSPSGELLVLD---SENNSRPKLVA-GSPEGYYGHVDGRPRGARMNHPKGLAVDDRGN-IYIADTMN-MAIRKISD 159 (495)
Q Consensus 86 ~GIAVd~dG~LyVaD---s~n~~ii~iva-Gs~~g~~G~~dG~~~~a~f~~P~GIAVD~dGn-IYVAD~~N-~rIrk~d~ 159 (495)
..++++|||..+++- ..+...+.++. .++.-..- .+ .-.....+++.+||+ |+.++... .+|+++|.
T Consensus 153 ~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~~l--~~-----~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~ 225 (582)
T 3o4h_A 153 FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLRVF--DS-----GEGSFSSASISPGMKVTAGLETAREARLVTVDP 225 (582)
T ss_dssp CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCEEE--CC-----SSCEEEEEEECTTSCEEEEEECSSCEEEEEECT
T ss_pred ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCceEe--ec-----CCCccccceECCCCCEEEEccCCCeeEEEEEcC
Confidence 678899999865532 22223444443 11110000 00 011236889999998 55445432 38999996
Q ss_pred CC--cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCC
Q 011014 160 TG--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDD 219 (495)
Q Consensus 160 ~G--V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~gN~rI~~~d~~g~ 219 (495)
++ ..++.+.. + ....+ .-..+...+ ..++|.|+++-..+++++.++. |.
T Consensus 226 ~~~~~~~~~~~~-~----~~~~~----~~~~~~~~~-~spdg~~~~~~~~~g~~~l~~~-g~ 276 (582)
T 3o4h_A 226 RDGSVEDLELPS-K----DFSSY----RPTAITWLG-YLPDGRLAVVARREGRSAVFID-GE 276 (582)
T ss_dssp TTCCEEECCCSC-S----HHHHH----CCSEEEEEE-ECTTSCEEEEEEETTEEEEEET-TE
T ss_pred CCCcEEEccCCC-c----Chhhh----hhcccccee-EcCCCcEEEEEEcCCcEEEEEE-CC
Confidence 54 33221110 0 00000 000112222 4677788887777778888887 54
No 259
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=38.07 E-value=2.6e+02 Score=26.22 Aligned_cols=105 Identities=10% Similarity=-0.079 Sum_probs=63.2
Q ss_pred cceEEEcC--CCCEEEEECCCCEEEEEcCC-C-c-EEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECC
Q 011014 133 PKGLAVDD--RGNIYIADTMNMAIRKISDT-G-V-TTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRG 207 (495)
Q Consensus 133 P~GIAVD~--dGnIYVAD~~N~rIrk~d~~-G-V-~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~g 207 (495)
-..|++++ +|+++++=...+.|+.+|.. + . .+..+.. -.....++ ..++|.++++-..
T Consensus 128 v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~----------------~~~i~~~~-~~pdg~~lasg~~ 190 (343)
T 3lrv_A 128 IIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKS----------------DVEYSSGV-LHKDSLLLALYSP 190 (343)
T ss_dssp EEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCS----------------SCCCCEEE-ECTTSCEEEEECT
T ss_pred EEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCC----------------CCceEEEE-ECCCCCEEEEEcC
Confidence 45888998 89988877778899999943 3 2 2221110 01235566 5778888888778
Q ss_pred CCeEEEEECCCCcee--eCCC--CCCcceEEEEecCcCeEEEEEccCCceEEEee
Q 011014 208 NQAIREIQLHDDDCS--DNYD--DTFHLGIFVLVAAAFFGYMLALLQRRVQAMFS 258 (495)
Q Consensus 208 N~rI~~~d~~g~~~~--~~~~--~g~P~GIAvd~~a~~~~yv~d~~~~Rv~~~~~ 258 (495)
++.|+.++.....+. .... .+.-..+++.. .+...++... ..| ++|.
T Consensus 191 dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~--~g~~l~s~~~-~~v-~iwd 241 (343)
T 3lrv_A 191 DGILDVYNLSSPDQASSRFPVDEEAKIKEVKFAD--NGYWMVVECD-QTV-VCFD 241 (343)
T ss_dssp TSCEEEEESSCTTSCCEECCCCTTSCEEEEEECT--TSSEEEEEES-SBE-EEEE
T ss_pred CCEEEEEECCCCCCCccEEeccCCCCEEEEEEeC--CCCEEEEEeC-CeE-EEEE
Confidence 889999998876643 2222 33346667664 3333333333 355 4443
No 260
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=37.82 E-value=4.2e+02 Score=28.62 Aligned_cols=74 Identities=9% Similarity=0.051 Sum_probs=48.9
Q ss_pred cceEEEcCCCCEEEEECCCCEEEEEcCCC-cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECCCCeE
Q 011014 133 PKGLAVDDRGNIYIADTMNMAIRKISDTG-VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAI 211 (495)
Q Consensus 133 P~GIAVD~dGnIYVAD~~N~rIrk~d~~G-V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~gN~rI 211 (495)
-.++++.++|....+=+.++.|+.++.++ +.++. ... +... ..-.+++ ..++|.++++-...+.|
T Consensus 88 V~~vawSPdG~~LAs~s~dg~V~iwd~~~~l~~l~-~~~---------~~~~---~sv~sva-fSPDG~~LAsgs~DGtV 153 (588)
T 2j04_A 88 PRVCKPSPIDDWMAVLSNNGNVSVFKDNKMLTNLD-SKG---------NLSS---RTYHCFE-WNPIESSIVVGNEDGEL 153 (588)
T ss_dssp EEEEEECSSSSCEEEEETTSCEEEEETTEEEEECC-CSS---------CSTT---TCEEEEE-ECSSSSCEEEEETTSEE
T ss_pred EEEEEECCCCCEEEEEeCCCcEEEEeCCceeeecc-CCC---------cccc---ccEEEEE-EcCCCCEEEEEcCCCEE
Confidence 45999999999777767788899999766 23321 100 0000 0123667 46777776666678899
Q ss_pred EEEECCCCc
Q 011014 212 REIQLHDDD 220 (495)
Q Consensus 212 ~~~d~~g~~ 220 (495)
+.+++.+..
T Consensus 154 kIWd~~~~~ 162 (588)
T 2j04_A 154 QFFSIRKNS 162 (588)
T ss_dssp EEEECCCCT
T ss_pred EEEECCCCc
Confidence 999988864
No 261
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=37.74 E-value=2.5e+02 Score=25.93 Aligned_cols=144 Identities=12% Similarity=0.083 Sum_probs=74.4
Q ss_pred ceEEEEcC-CCcEEEEECCCCeeEEEEc-CCCCccccccCCCcCccccCCcceEEEcC--CCCEEEEECCCCEEEEEcCC
Q 011014 85 PFSVAVSP-SGELLVLDSENNSRPKLVA-GSPEGYYGHVDGRPRGARMNHPKGLAVDD--RGNIYIADTMNMAIRKISDT 160 (495)
Q Consensus 85 P~GIAVd~-dG~LyVaDs~n~~ii~iva-Gs~~g~~G~~dG~~~~a~f~~P~GIAVD~--dGnIYVAD~~N~rIrk~d~~ 160 (495)
-..+++++ ++.++++-.... .+++.. .......-...+ .-..-..+++.+ ++.++++=...+.|+.+|..
T Consensus 143 v~~v~~~p~~~~~l~sgs~D~-~v~iwd~~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~ 216 (304)
T 2ynn_A 143 VMCVAFNPKDPSTFASGCLDR-TVKVWSLGQSTPNFTLTTG-----QERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQ 216 (304)
T ss_dssp EEEEEECTTCTTEEEEEETTS-EEEEEETTCSSCSEEEECC-----CTTCEEEEEECCSTTCCEEEEEETTSEEEEEETT
T ss_pred EEEEEECCCCCCEEEEEeCCC-eEEEEECCCCCccceeccC-----CcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCC
Confidence 46788887 567666655554 455543 221100000000 001122445544 66777777778899999943
Q ss_pred -C--cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCceee--CCCCCCcceEEE
Q 011014 161 -G--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCSD--NYDDTFHLGIFV 235 (495)
Q Consensus 161 -G--V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~gN~rI~~~d~~g~~~~~--~~~~g~P~GIAv 235 (495)
+ +.++.+-. ..-..++ ..+++.++++-...+.|+..+.....+.. ....+....+++
T Consensus 217 ~~~~~~~~~~h~-----------------~~v~~~~-~~p~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~ 278 (304)
T 2ynn_A 217 TKSCVATLEGHM-----------------SNVSFAV-FHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIAT 278 (304)
T ss_dssp TTEEEEEEECCS-----------------SCEEEEE-ECSSSSEEEEEETTSCEEEEETTTCCEEEEECCSSSSEEEEEE
T ss_pred CCccceeeCCCC-----------------CCEEEEE-ECCCCCEEEEEcCCCeEEEEECCCCceeeeccCCCccEEEEEE
Confidence 4 45553311 1123344 56677777777677888888887755543 222233445555
Q ss_pred EecCcCeEEEEEccCCce
Q 011014 236 LVAAAFFGYMLALLQRRV 253 (495)
Q Consensus 236 d~~a~~~~yv~d~~~~Rv 253 (495)
..... ..|++......+
T Consensus 279 ~~~~~-~~~~asg~~~g~ 295 (304)
T 2ynn_A 279 HPTGR-KNYIASGFDNGF 295 (304)
T ss_dssp CTTCG-GGCEEEEETTEE
T ss_pred CCCCC-ceEEEEecCCce
Confidence 44222 223444444444
No 262
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=36.76 E-value=1.6e+02 Score=33.09 Aligned_cols=109 Identities=8% Similarity=-0.046 Sum_probs=55.4
Q ss_pred eEEEEcCCCcEEEEECCCCeeEEEEcCCCCccccccCCCcCccccCCcceEEEcCCCC-EE-EEEC----CCCEEEEEcC
Q 011014 86 FSVAVSPSGELLVLDSENNSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGN-IY-IADT----MNMAIRKISD 159 (495)
Q Consensus 86 ~GIAVd~dG~LyVaDs~n~~ii~ivaGs~~g~~G~~dG~~~~a~f~~P~GIAVD~dGn-IY-VAD~----~N~rIrk~d~ 159 (495)
.-|++..++.||+.|........+. +. . .....+++.+||+ |. +++. ++..|++++.
T Consensus 25 ~~iaf~~~~~l~~~~~~gg~~~~lt-~~--------~--------~~v~~~~~SPDG~~la~~s~~~~~~~~~~i~~~d~ 87 (1045)
T 1k32_A 25 DRIIFVCCDDLWEHDLKSGSTRKIV-SN--------L--------GVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNG 87 (1045)
T ss_dssp TEEEEEETTEEEEEETTTCCEEEEE-CS--------S--------SEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEET
T ss_pred CEEEEEECCcEEEEECCCCcEEEee-eC--------C--------CcccCeEECCCCCEEEEEEeeccCCCCCeEEEEEC
Confidence 3555555567777776554332222 11 0 1234788899998 33 3332 4567888886
Q ss_pred CC--cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEEC------CCCeEEEEECCCCcee
Q 011014 160 TG--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDR------GNQAIREIQLHDDDCS 222 (495)
Q Consensus 160 ~G--V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~------gN~rI~~~d~~g~~~~ 222 (495)
++ ...+.+.... ....+.....++ ..++|.|+++.. ...+|+.+++++..+.
T Consensus 88 ~~g~~~~lt~~~~~----------~~~~~~~~~~~~-~SpDg~ll~~~~~~~~~~~~~~l~~~~~~~g~~~ 147 (1045)
T 1k32_A 88 ENGEIKRITYFSGK----------STGRRMFTDVAG-FDPDGNLIISTDAMQPFSSMTCLYRVENDGINFV 147 (1045)
T ss_dssp TTTEEEECCCCCEE----------EETTEECSEEEE-ECTTCCEEEEECTTSSSTTCCEEEEEEGGGTEEE
T ss_pred CCCCeEEcccCCCc----------cccccccccccc-CCCCCEEEEEECCcCCCcccceEEEEECCCCCeE
Confidence 55 3343221100 000112224455 456665544433 3357888887776543
No 263
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=36.64 E-value=2.5e+02 Score=25.69 Aligned_cols=109 Identities=13% Similarity=0.011 Sum_probs=55.5
Q ss_pred EcCCCcEEEEECCCCeeEEEEcCCCCccccccCCCcCccccCCcceEEEcC---CCCEEEEECCCCEEEEEcCCC---cE
Q 011014 90 VSPSGELLVLDSENNSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDD---RGNIYIADTMNMAIRKISDTG---VT 163 (495)
Q Consensus 90 Vd~dG~LyVaDs~n~~ii~ivaGs~~g~~G~~dG~~~~a~f~~P~GIAVD~---dGnIYVAD~~N~rIrk~d~~G---V~ 163 (495)
++++|+++++-..+. .+.++.-........ ...-.....+++++ +++++++-..++.|+.++... +.
T Consensus 176 ~~~~~~~l~~~~~d~-~i~i~d~~~~~~~~~------~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~ 248 (357)
T 3i2n_A 176 YNQEERVVCAGYDNG-DIKLFDLRNMALRWE------TNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTK 248 (357)
T ss_dssp CC-CCCEEEEEETTS-EEEEEETTTTEEEEE------EECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTT
T ss_pred cCCCCCEEEEEccCC-eEEEEECccCceeee------cCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCccc
Confidence 456777766665544 455543221000000 00112456899998 788777767788999998332 22
Q ss_pred EEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCe-EEEEECCCCeEEEEECCC
Q 011014 164 TIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCS-LLVIDRGNQAIREIQLHD 218 (495)
Q Consensus 164 tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~-LyVaD~gN~rI~~~d~~g 218 (495)
.+..... . ..-.....++ ..+++. ++++-..++.|+.++...
T Consensus 249 ~~~~~~~---~---------~~~~~v~~~~-~~~~~~~~l~~~~~dg~i~iwd~~~ 291 (357)
T 3i2n_A 249 GFASVSE---K---------AHKSTVWQVR-HLPQNRELFLTAGGAGGLHLWKYEY 291 (357)
T ss_dssp EEEEEEE---E---------CCSSCEEEEE-EETTEEEEEEEEETTSEEEEEEEEC
T ss_pred ceeeecc---C---------CCcCCEEEEE-ECCCCCcEEEEEeCCCcEEEeecCC
Confidence 2210000 0 0011234455 345555 666666667788777654
No 264
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=36.26 E-value=2.5e+02 Score=25.61 Aligned_cols=124 Identities=8% Similarity=0.003 Sum_probs=66.9
Q ss_pred CCceEEEEcCCCcEEEEECCCCeeEEEEcCC--CCccccccCCCcCccccCCcceEEEcC-CCCEEEEECCCCEEEEEc-
Q 011014 83 MEPFSVAVSPSGELLVLDSENNSRPKLVAGS--PEGYYGHVDGRPRGARMNHPKGLAVDD-RGNIYIADTMNMAIRKIS- 158 (495)
Q Consensus 83 ~~P~GIAVd~dG~LyVaDs~n~~ii~ivaGs--~~g~~G~~dG~~~~a~f~~P~GIAVD~-dGnIYVAD~~N~rIrk~d- 158 (495)
.....+++++++ |+++...+ .+.++.-. ......... ...-.....|++++ +|+++++-..++.|+.++
T Consensus 151 ~~v~~~~~~~~~-l~~~~~d~--~i~i~d~~~~~~~~~~~~~----~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~ 223 (342)
T 1yfq_A 151 NKIFTMDTNSSR-LIVGMNNS--QVQWFRLPLCEDDNGTIEE----SGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFF 223 (342)
T ss_dssp CCEEEEEECSSE-EEEEESTT--EEEEEESSCCTTCCCEEEE----CSCSSCEEEEEECSGGGCEEEEEETTSEEEEEEC
T ss_pred CceEEEEecCCc-EEEEeCCC--eEEEEECCccccccceeee----cCCCCceeEEEECCCCCCEEEEEecCCcEEEEEE
Confidence 356788888776 66665443 34444311 100000000 00112456899999 898888777788888855
Q ss_pred -CC------C-cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCCCcee
Q 011014 159 -DT------G-VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCS 222 (495)
Q Consensus 159 -~~------G-V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~gN~rI~~~d~~g~~~~ 222 (495)
.. . +.++.+.... ..+ .........++ ..+++.++++-..++.|+.+++....+.
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~-----~~~---~~~~~~i~~~~-~s~~~~~l~~~~~dg~i~vwd~~~~~~~ 286 (342)
T 1yfq_A 224 DDQGDDYNSSKRFAFRCHRLN-----LKD---TNLAYPVNSIE-FSPRHKFLYTAGSDGIISCWNLQTRKKI 286 (342)
T ss_dssp CTTCCSTTCTTCEEEECCCCC-----TTC---CSSCCCEEEEE-ECTTTCCEEEEETTSCEEEEETTTTEEE
T ss_pred cCCCcccccccceeeeccccc-----ccc---cccceeEEEEE-EcCCCCEEEEecCCceEEEEcCccHhHh
Confidence 43 2 4444332110 000 01112344566 4666766666667788999998866544
No 265
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=35.79 E-value=48 Score=36.25 Aligned_cols=83 Identities=10% Similarity=0.068 Sum_probs=54.4
Q ss_pred CCcceEEEcCCCC-EEEEECCCCEEEEEcCCCc-EEEecCcccCCCCCCCCCCcCcc-cCCCceEEEECCCCeEEEEECC
Q 011014 131 NHPKGLAVDDRGN-IYIADTMNMAIRKISDTGV-TTIAGGKWSRGVGHVDGPSEDAK-FSNDFDVVYVGSSCSLLVIDRG 207 (495)
Q Consensus 131 ~~P~GIAVD~dGn-IYVAD~~N~rIrk~d~~GV-~tiaGg~~G~~~g~~dG~~~~a~-f~~P~gVa~vd~~G~LyVaD~g 207 (495)
++|+|+-+++||. ++|+.....+|-+|+-+.+ ..|+++-. ...+-...+.. =..|...+ .|.+|+.|.+-.-
T Consensus 323 ksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~----~~~~~~~ae~e~GlGPlHt~-Fd~~G~aYTtlfi 397 (638)
T 3sbq_A 323 KNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLA----DPRDVIVGEPELGLGPLHTT-FDGRGNAYTTLFI 397 (638)
T ss_dssp SSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCS----CGGGGEEECCBCCSCEEEEE-ECSSSEEEEEETT
T ss_pred CCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhcccc----CcccceEeeccCCCcccEEE-ECCCCceEeeeee
Confidence 7899999999998 8888888999999884431 11111000 00000000000 13688888 6889999999998
Q ss_pred CCeEEEEECCC
Q 011014 208 NQAIREIQLHD 218 (495)
Q Consensus 208 N~rI~~~d~~g 218 (495)
...|.+.+.+.
T Consensus 398 dSqvvkWni~~ 408 (638)
T 3sbq_A 398 DSQVVKWNMEE 408 (638)
T ss_dssp TTEEEEEEHHH
T ss_pred cceEEEEeccH
Confidence 89999988754
No 266
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=35.70 E-value=4.1e+02 Score=27.88 Aligned_cols=24 Identities=4% Similarity=-0.007 Sum_probs=15.0
Q ss_pred CCCeEEEEECCCCeEEEEECCCCce
Q 011014 197 SSCSLLVIDRGNQAIREIQLHDDDC 221 (495)
Q Consensus 197 ~~G~LyVaD~gN~rI~~~d~~g~~~ 221 (495)
.++.||+.+ ..+.|+.||..+..+
T Consensus 474 ~gg~v~~g~-~dg~l~a~D~~tG~~ 497 (571)
T 2ad6_A 474 KGGLVWYAT-LDGYLKALDNKDGKE 497 (571)
T ss_dssp TTTEEEEEC-TTSEEEEEETTTCCE
T ss_pred CCCEEEEEc-CCCeEEEEECCCCCE
Confidence 456677754 456777777665444
No 267
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=35.62 E-value=4.4e+02 Score=28.20 Aligned_cols=140 Identities=10% Similarity=-0.011 Sum_probs=0.0
Q ss_pred EEEcCCCcEEEEECCCCeeEEEEcCCCCccccccCCCcCccccCCcce--------------------EEEcC-CCCEEE
Q 011014 88 VAVSPSGELLVLDSENNSRPKLVAGSPEGYYGHVDGRPRGARMNHPKG--------------------LAVDD-RGNIYI 146 (495)
Q Consensus 88 IAVd~dG~LyVaDs~n~~ii~ivaGs~~g~~G~~dG~~~~a~f~~P~G--------------------IAVD~-dGnIYV 146 (495)
+..+.+|.||+.|..+...+.-+.-....-....+.....-....+.. +|+|+ .|.+||
T Consensus 318 ~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv 397 (668)
T 1kv9_A 318 MQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYI 397 (668)
T ss_dssp EECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEE
T ss_pred EEECCCCEEEEEECCCCCEeccccccccccccccccccCCccccccccccCCeeEECCCCccccCCCcceECCCCCEEEE
Q ss_pred -----------------------------------EECCCCEEEEEc-CCC--cEEEecCcccCCCCCCCCCCcCcccCC
Q 011014 147 -----------------------------------ADTMNMAIRKIS-DTG--VTTIAGGKWSRGVGHVDGPSEDAKFSN 188 (495)
Q Consensus 147 -----------------------------------AD~~N~rIrk~d-~~G--V~tiaGg~~G~~~g~~dG~~~~a~f~~ 188 (495)
+....+.|..+| .+| +-.+.-+. .
T Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~~~------------------~ 459 (668)
T 1kv9_A 398 PYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYPT------------------H 459 (668)
T ss_dssp EEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEESS------------------S
T ss_pred eccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccCCC------------------C
Q ss_pred CceEEEECCCCeEEEEECCCCeEEEEECCCCceee---CCCCCCcceEEEEecCcCeEEEEEc
Q 011014 189 DFDVVYVGSSCSLLVIDRGNQAIREIQLHDDDCSD---NYDDTFHLGIFVLVAAAFFGYMLAL 248 (495)
Q Consensus 189 P~gVa~vd~~G~LyVaD~gN~rI~~~d~~g~~~~~---~~~~g~P~GIAvd~~a~~~~yv~d~ 248 (495)
..+.+++...+.||+. ...+.|+.++........ ......-.-++... .+.+||+.+
T Consensus 460 ~~~~~~~t~gg~vf~g-~~dg~l~a~d~~tG~~l~~~~~~~~~~~~p~~~~~--~G~~yva~~ 519 (668)
T 1kv9_A 460 WNGGTLSTAGNLVFQG-TAAGQMHAYSADKGEALWQFEAQSGIVAAPMTFEL--AGRQYVAIM 519 (668)
T ss_dssp CCCCEEEETTTEEEEE-CTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEE--TTEEEEEEE
T ss_pred CcCceeEeCCCEEEEE-CCcccchhhhhhcChhheEecCCCCcccCceEEEE--CCEEEEEEE
No 268
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=35.48 E-value=2.7e+02 Score=25.68 Aligned_cols=28 Identities=4% Similarity=0.089 Sum_probs=22.1
Q ss_pred CcceEEEcCC--CCEEEEECCCCEEEEEcC
Q 011014 132 HPKGLAVDDR--GNIYIADTMNMAIRKISD 159 (495)
Q Consensus 132 ~P~GIAVD~d--GnIYVAD~~N~rIrk~d~ 159 (495)
....|++.++ |+++++=..++.|+.++.
T Consensus 103 ~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~ 132 (379)
T 3jrp_A 103 SVNSVQWAPHEYGPLLLVASSDGKVSVVEF 132 (379)
T ss_dssp CEEEEEECCGGGCSEEEEEETTSEEEEEEC
T ss_pred ceEEEEeCCCCCCCEEEEecCCCcEEEEec
Confidence 3568899988 887777777889999883
No 269
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=34.65 E-value=2.9e+02 Score=25.90 Aligned_cols=27 Identities=11% Similarity=0.010 Sum_probs=18.4
Q ss_pred eEEEcCCCC-E-EEEECCCC---EEEEEcCCC
Q 011014 135 GLAVDDRGN-I-YIADTMNM---AIRKISDTG 161 (495)
Q Consensus 135 GIAVD~dGn-I-YVAD~~N~---rIrk~d~~G 161 (495)
.+++.++|+ | |+++.... .|++++.++
T Consensus 242 ~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~ 273 (388)
T 3pe7_A 242 HEFWVPDGSALVYVSYLKGSPDRFIYSADPET 273 (388)
T ss_dssp EEEECTTSSCEEEEEEETTCCCEEEEEECTTT
T ss_pred cceECCCCCEEEEEecCCCCCcceEEEEecCC
Confidence 568899997 5 66664332 499999543
No 270
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=33.76 E-value=4.7e+02 Score=28.03 Aligned_cols=28 Identities=4% Similarity=0.089 Sum_probs=22.2
Q ss_pred CcceEEEcCC--CCEEEEECCCCEEEEEcC
Q 011014 132 HPKGLAVDDR--GNIYIADTMNMAIRKISD 159 (495)
Q Consensus 132 ~P~GIAVD~d--GnIYVAD~~N~rIrk~d~ 159 (495)
....|++.++ |+++++=..++.|+.++.
T Consensus 101 ~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl 130 (753)
T 3jro_A 101 SVNSVQWAPHEYGPLLLVASSDGKVSVVEF 130 (753)
T ss_dssp CEEEEEECCGGGCSEEEEEETTSEEEEEEC
T ss_pred CeEEEEECCCCCCCEEEEEeCCCcEEEEEe
Confidence 3458899988 887777777889999983
No 271
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=33.49 E-value=3.4e+02 Score=26.32 Aligned_cols=52 Identities=12% Similarity=0.070 Sum_probs=26.6
Q ss_pred CCeEEEEECCCCeEEEEECCCCceee--CCCCCCcceEEEEecCcCeEEEEEccCCce
Q 011014 198 SCSLLVIDRGNQAIREIQLHDDDCSD--NYDDTFHLGIFVLVAAAFFGYMLALLQRRV 253 (495)
Q Consensus 198 ~G~LyVaD~gN~rI~~~d~~g~~~~~--~~~~g~P~GIAvd~~a~~~~yv~d~~~~Rv 253 (495)
++..+++-..++.|+.++.....+.. ....+....++.+. ...++......|
T Consensus 288 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~----~~l~~~~~dg~i 341 (445)
T 2ovr_B 288 DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKD----NILVSGNADSTV 341 (445)
T ss_dssp CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEEET----TEEEEEETTSCE
T ss_pred CCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEEEEEEeC----CEEEEEeCCCeE
Confidence 34444444456777777776655432 22223344555542 344555555566
No 272
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=32.33 E-value=1.4e+02 Score=32.22 Aligned_cols=103 Identities=14% Similarity=0.125 Sum_probs=0.0
Q ss_pred EEEcCCCcEEEEECCCCeeEEEEcCCCCccccccCCCcCcccc----CCcce--EEEcCC----------CCEEEEECCC
Q 011014 88 VAVSPSGELLVLDSENNSRPKLVAGSPEGYYGHVDGRPRGARM----NHPKG--LAVDDR----------GNIYIADTMN 151 (495)
Q Consensus 88 IAVd~dG~LyVaDs~n~~ii~ivaGs~~g~~G~~dG~~~~a~f----~~P~G--IAVD~d----------GnIYVAD~~N 151 (495)
++.+ +|+|++-|..+.....++.+. ........+ ..|.| |++..+ |++|+-|..+
T Consensus 31 ~~~~-~~~i~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~ 101 (740)
T 4a5s_A 31 LYKQ-ENNILVFNAEYGNSSVFLENS--------TFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNK 101 (740)
T ss_dssp EEEE-TTEEEEEETTTCCEEEEECTT--------TTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTT
T ss_pred EEEc-CCcEEEEECCCCceEEEEech--------hhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEECCC
Q ss_pred CEEEEEcCCC--cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECCCCeEEEEECCC
Q 011014 152 MAIRKISDTG--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHD 218 (495)
Q Consensus 152 ~rIrk~d~~G--V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~gN~rI~~~d~~g 218 (495)
+.++.+.... +...+....| .-||++ .+++||+.|...+.+++++.++
T Consensus 102 ~~~~~l~~~~~~~~~~~~SPdG------------------~~la~~-~~~~i~~~~~~~~~~~~lt~~g 151 (740)
T 4a5s_A 102 RQLITEERIPNNTQWVTWSPVG------------------HKLAYV-WNNDIYVKIEPNLPSYRITWTG 151 (740)
T ss_dssp TEECCSSCCCTTEEEEEECSST------------------TCEEEE-ETTEEEEESSTTSCCEECCSCC
T ss_pred CcEEEcccCCCcceeeEECCCC------------------CEEEEE-ECCeEEEEECCCCceEEEcCCC
No 273
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=31.33 E-value=4.6e+02 Score=28.22 Aligned_cols=26 Identities=0% Similarity=-0.089 Sum_probs=16.9
Q ss_pred ECCCCeEEEEECCCCeEEEEECCCCce
Q 011014 195 VGSSCSLLVIDRGNQAIREIQLHDDDC 221 (495)
Q Consensus 195 vd~~G~LyVaD~gN~rI~~~d~~g~~~ 221 (495)
+...+.||+. ..++.|+.||..+...
T Consensus 483 ~tagglvf~g-t~dg~l~a~D~~tG~~ 508 (689)
T 1yiq_A 483 STAGNLVFEG-SADGRVIAYAADTGEK 508 (689)
T ss_dssp EETTTEEEEE-CTTSEEEEEETTTCCE
T ss_pred eECCCEEEEE-CCCCcEEEEECCCCcc
Confidence 3455666666 4567888888775444
No 274
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=31.18 E-value=9.7 Score=42.02 Aligned_cols=12 Identities=25% Similarity=0.199 Sum_probs=6.5
Q ss_pred CcCCCcccCcchh
Q 011014 378 SYHPYTIKDLDKR 390 (495)
Q Consensus 378 ~~~~~~~~~~~~~ 390 (495)
.|||-. +||+..
T Consensus 31 ~~~~~~-~~~~~~ 42 (727)
T 4b8c_D 31 LLHPHL-DDPSLL 42 (727)
T ss_dssp TTSGGG-TSCCCT
T ss_pred cccCCC-CCchhc
Confidence 366644 466555
No 275
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=30.49 E-value=1.3e+02 Score=31.57 Aligned_cols=68 Identities=7% Similarity=0.061 Sum_probs=45.2
Q ss_pred ceEEEcCCCCEEEEECCCCEEEEEcC-CC--cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCCCeEEEEECCCCe
Q 011014 134 KGLAVDDRGNIYIADTMNMAIRKISD-TG--VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNQA 210 (495)
Q Consensus 134 ~GIAVD~dGnIYVAD~~N~rIrk~d~-~G--V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~LyVaD~gN~r 210 (495)
..|++.++|..+++=...+.|+.++. .+ +.++.|-. ..-..|+ ..++|.++++-...+.
T Consensus 359 ~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~-----------------~~V~sva-~Sp~g~~l~Sgs~Dgt 420 (524)
T 2j04_B 359 VPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRE-----------------TTITAIG-VSRLHPMVLAGSADGS 420 (524)
T ss_dssp CCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEECS-----------------SCEEEEE-CCSSCCBCEEEETTTE
T ss_pred cceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecCC-----------------CceEEEE-eCCCCCeEEEEECCCE
Confidence 57999999998888777788999983 34 45554311 1234555 4566766666666777
Q ss_pred EEEEECCCC
Q 011014 211 IREIQLHDD 219 (495)
Q Consensus 211 I~~~d~~g~ 219 (495)
|+.+++...
T Consensus 421 v~lwd~~~~ 429 (524)
T 2j04_B 421 LIITNAARR 429 (524)
T ss_dssp EECCBSCSS
T ss_pred EEEEechHh
Confidence 887776553
No 276
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=28.76 E-value=3.6e+02 Score=25.02 Aligned_cols=107 Identities=18% Similarity=0.185 Sum_probs=56.9
Q ss_pred ceEEEEcCCCcEEEEECCCCeeEEEEc---CCCC---ccccccCCCcCccccCCcceEEEcC--CCCEEEEECCCCEEEE
Q 011014 85 PFSVAVSPSGELLVLDSENNSRPKLVA---GSPE---GYYGHVDGRPRGARMNHPKGLAVDD--RGNIYIADTMNMAIRK 156 (495)
Q Consensus 85 P~GIAVd~dG~LyVaDs~n~~ii~iva---Gs~~---g~~G~~dG~~~~a~f~~P~GIAVD~--dGnIYVAD~~N~rIrk 156 (495)
-..|+++++|+++++-+... .+++.. +... ...|+ . ..-..|++.+ +|+++++=...+.|+.
T Consensus 16 V~~v~~s~~g~~lasgs~D~-~v~lwd~~~~~~~~~~~l~gH-~--------~~V~~v~~~~~~~~~~l~s~s~D~~v~i 85 (316)
T 3bg1_A 16 IHDAQMDYYGTRLATCSSDR-SVKIFDVRNGGQILIADLRGH-E--------GPVWQVAWAHPMYGNILASCSYDRKVII 85 (316)
T ss_dssp EEEEEECGGGCEEEEEETTT-EEEEEEEETTEEEEEEEEECC-S--------SCEEEEEECCGGGSSCEEEEETTSCEEE
T ss_pred EEEeeEcCCCCEEEEEeCCC-eEEEEEecCCCcEEEEEEcCC-C--------ccEEEEEeCCCCCCCEEEEEECCCEEEE
Confidence 35678888888777665554 444432 1100 01121 1 1234677754 4777776666788998
Q ss_pred EcCC-C----cEEEecCcccCCCCCCCCCCcCcccCCCceEEEECCC--CeEEEEECCCCeEEEEECCCC
Q 011014 157 ISDT-G----VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSS--CSLLVIDRGNQAIREIQLHDD 219 (495)
Q Consensus 157 ~d~~-G----V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~--G~LyVaD~gN~rI~~~d~~g~ 219 (495)
++.. + +.++.+.. ..-..|++ .++ +.++++-...+.|+.++..+.
T Consensus 86 Wd~~~~~~~~~~~~~~h~-----------------~~V~~v~~-~p~~~g~~lasgs~D~~i~lwd~~~~ 137 (316)
T 3bg1_A 86 WREENGTWEKSHEHAGHD-----------------SSVNSVCW-APHDYGLILACGSSDGAISLLTYTGE 137 (316)
T ss_dssp ECCSSSCCCEEEEECCCS-----------------SCCCEEEE-CCTTTCSCEEEECSSSCEEEEEECSS
T ss_pred EECCCCcceEEEEccCCC-----------------CceEEEEE-CCCCCCcEEEEEcCCCCEEEEecCCC
Confidence 8843 3 12221110 12344553 333 566666666677777776543
No 277
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=28.61 E-value=3.4e+02 Score=24.80 Aligned_cols=103 Identities=11% Similarity=0.034 Sum_probs=55.1
Q ss_pred ceEEEcCCCCEEEEECCCCEEEEEcCCC-----cEEEecCcccCCCCCCCCCCcCcccCCCceEEEEC-CCCeEEEEECC
Q 011014 134 KGLAVDDRGNIYIADTMNMAIRKISDTG-----VTTIAGGKWSRGVGHVDGPSEDAKFSNDFDVVYVG-SSCSLLVIDRG 207 (495)
Q Consensus 134 ~GIAVD~dGnIYVAD~~N~rIrk~d~~G-----V~tiaGg~~G~~~g~~dG~~~~a~f~~P~gVa~vd-~~G~LyVaD~g 207 (495)
..++++++|+++++=..++.|++++.++ +.++.|-. + .-.+|++.. .++.++++-..
T Consensus 13 ~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~---------~--------~V~~v~~s~~~~g~~l~s~s~ 75 (297)
T 2pm7_B 13 HDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHE---------G--------PVWRVDWAHPKFGTILASCSY 75 (297)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCS---------S--------CEEEEEECCGGGCSEEEEEET
T ss_pred EEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEcccc---------C--------CeEEEEecCCCcCCEEEEEcC
Confidence 4789999999888877788899988432 34443211 0 112334211 23556665556
Q ss_pred CCeEEEEECCCCce---ee-CCCCCCcceEEEEecCcCeEEEEEccCCce
Q 011014 208 NQAIREIQLHDDDC---SD-NYDDTFHLGIFVLVAAAFFGYMLALLQRRV 253 (495)
Q Consensus 208 N~rI~~~d~~g~~~---~~-~~~~g~P~GIAvd~~a~~~~yv~d~~~~Rv 253 (495)
.+.|+..+.....+ .. ....+.-..+++.....+...++......|
T Consensus 76 D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v 125 (297)
T 2pm7_B 76 DGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKV 125 (297)
T ss_dssp TTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEE
T ss_pred CCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcE
Confidence 67777777765321 11 111222344555432113345555555666
No 278
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=28.46 E-value=3.6e+02 Score=25.05 Aligned_cols=29 Identities=14% Similarity=0.195 Sum_probs=23.0
Q ss_pred CcceEEEcCCCCEEEEECCCCEEEEEcCC
Q 011014 132 HPKGLAVDDRGNIYIADTMNMAIRKISDT 160 (495)
Q Consensus 132 ~P~GIAVD~dGnIYVAD~~N~rIrk~d~~ 160 (495)
....++++++|+.+++=..++.|+.++..
T Consensus 247 ~v~~~~~~~~~~~l~~~~~dg~i~vwd~~ 275 (408)
T 4a11_B 247 KVNGLCFTSDGLHLLTVGTDNRMRLWNSS 275 (408)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred ceeEEEEcCCCCEEEEecCCCeEEEEECC
Confidence 45689999999877776678889999943
No 279
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=26.15 E-value=3.3e+02 Score=25.28 Aligned_cols=26 Identities=8% Similarity=0.083 Sum_probs=21.9
Q ss_pred ceEEEcCCCCEEEEECCCCEEEEEcC
Q 011014 134 KGLAVDDRGNIYIADTMNMAIRKISD 159 (495)
Q Consensus 134 ~GIAVD~dGnIYVAD~~N~rIrk~d~ 159 (495)
..|+++++|+++++=...+.|++++.
T Consensus 17 ~~v~~s~~g~~lasgs~D~~v~lwd~ 42 (316)
T 3bg1_A 17 HDAQMDYYGTRLATCSSDRSVKIFDV 42 (316)
T ss_dssp EEEEECGGGCEEEEEETTTEEEEEEE
T ss_pred EEeeEcCCCCEEEEEeCCCeEEEEEe
Confidence 47899999998888777889999883
No 280
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=25.63 E-value=1.2e+02 Score=33.02 Aligned_cols=75 Identities=17% Similarity=0.180 Sum_probs=46.5
Q ss_pred CCceEEEEcCCCc-EEEEECCCCeeEEEEcCCC-----Cccc-cccCCCcCccc-cCCcceEEEcCCCCEEEEECCCCEE
Q 011014 83 MEPFSVAVSPSGE-LLVLDSENNSRPKLVAGSP-----EGYY-GHVDGRPRGAR-MNHPKGLAVDDRGNIYIADTMNMAI 154 (495)
Q Consensus 83 ~~P~GIAVd~dG~-LyVaDs~n~~ii~ivaGs~-----~g~~-G~~dG~~~~a~-f~~P~GIAVD~dGnIYVAD~~N~rI 154 (495)
.+|+|+-++|||. ++|+.-... .+.++.-.. .+.. ...+-.....+ =-.|.-.++|.+|+.|.+=.....|
T Consensus 323 ksPHGv~vsPDGkyi~v~GKLsp-tvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~~G~aYTtlfidSqv 401 (638)
T 3sbq_A 323 KNPHGCNTSSDGKYFIAAGKLSP-TCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDGRGNAYTTLFIDSQV 401 (638)
T ss_dssp SSCCCEEECTTSCEEEEECTTSS-BEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECSSSEEEEEETTTTEE
T ss_pred CCCcceeeCCCCCEEEEcCCCCC-eEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECCCCceEeeeeecceE
Confidence 7999999999998 555554444 444443221 0000 00000000001 1368999999999999998888999
Q ss_pred EEEc
Q 011014 155 RKIS 158 (495)
Q Consensus 155 rk~d 158 (495)
.|++
T Consensus 402 vkWn 405 (638)
T 3sbq_A 402 VKWN 405 (638)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 9987
No 281
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=25.60 E-value=7.3e+02 Score=27.63 Aligned_cols=97 Identities=14% Similarity=0.083 Sum_probs=51.8
Q ss_pred CcceEEEcCCCCEEEEECCCCEEEEEcC-CC-cEEEe-cCcccCCCCCCCCCCcCcccCCCceEEEECCCCe-EEEEEC-
Q 011014 132 HPKGLAVDDRGNIYIADTMNMAIRKISD-TG-VTTIA-GGKWSRGVGHVDGPSEDAKFSNDFDVVYVGSSCS-LLVIDR- 206 (495)
Q Consensus 132 ~P~GIAVD~dGnIYVAD~~N~rIrk~d~-~G-V~tia-Gg~~G~~~g~~dG~~~~a~f~~P~gVa~vd~~G~-LyVaD~- 206 (495)
.+..++++++|+.+++-...+.|+++|. .| +..+. +.. + ....++ ..++|. |.++..
T Consensus 380 ~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~-~----------------~v~~~~-~SpDG~~la~~~~~ 441 (1045)
T 1k32_A 380 NVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSRE-A----------------MITDFT-ISDNSRFIAYGFPL 441 (1045)
T ss_dssp SEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSS-S----------------CCCCEE-ECTTSCEEEEEEEE
T ss_pred ceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCC-C----------------CccceE-ECCCCCeEEEEecC
Confidence 4568999999985554445679999995 44 43332 210 0 113445 455554 333322
Q ss_pred --------CCCeEEEEECCCCceeeCCCCC-CcceEEEEecCcCeEEEEE
Q 011014 207 --------GNQAIREIQLHDDDCSDNYDDT-FHLGIFVLVAAAFFGYMLA 247 (495)
Q Consensus 207 --------gN~rI~~~d~~g~~~~~~~~~g-~P~GIAvd~~a~~~~yv~d 247 (495)
.+..|+.+++++.......... ....+++... +..+|++.
T Consensus 442 ~~~~~~~~~~~~i~l~d~~~g~~~~l~~~~~~~~~~~~spd-G~~l~~~s 490 (1045)
T 1k32_A 442 KHGETDGYVMQAIHVYDMEGRKIFAATTENSHDYAPAFDAD-SKNLYYLS 490 (1045)
T ss_dssp CSSTTCSCCEEEEEEEETTTTEEEECSCSSSBEEEEEECTT-SCEEEEEE
T ss_pred ccccccCCCCCeEEEEECCCCcEEEeeCCCcccCCceEcCC-CCEEEEEe
Confidence 2357888888776544332222 2444555542 33444443
No 282
>4h3o_A Lectin; cadmium, plant protein; 2.17A {Allium sativum} PDB: 1kj1_A* 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D*
Probab=24.78 E-value=2.8e+02 Score=22.43 Aligned_cols=54 Identities=9% Similarity=0.164 Sum_probs=33.8
Q ss_pred eEEEEcCCCcEEEEECCCCeeEEEEcCCCCccccccCCCcCccccCCcceEEEcCCCCEEEEECCCCEEE
Q 011014 86 FSVAVSPSGELLVLDSENNSRPKLVAGSPEGYYGHVDGRPRGARMNHPKGLAVDDRGNIYIADTMNMAIR 155 (495)
Q Consensus 86 ~GIAVd~dG~LyVaDs~n~~ii~ivaGs~~g~~G~~dG~~~~a~f~~P~GIAVD~dGnIYVAD~~N~rIr 155 (495)
.-+.+..||+|.+-+. . .+...+++. . ....+.-+.+..+|+|.+.|..+..|.
T Consensus 21 y~l~~q~DgNLvly~~--~-~~vW~ant~--------~-----~~~~~~~L~l~~dGnLvL~d~~~~~vW 74 (105)
T 4h3o_A 21 YHFIMQDDCNLVLYDH--S-TSTWASNTE--------I-----GGKSGCSAVLQSDGNFVVYDSSGRSLW 74 (105)
T ss_dssp EEEEECTTSCEEEEET--T-EEEEECCCC--------C-----TTCCSCEEEECTTSCEEEECTTCCEEE
T ss_pred EEEEECCCCeEEEEEC--C-EEEEEecCC--------C-----CCCccEEEEEeCCccEEEECCCcEEEE
Confidence 5567778999888763 2 233334331 1 112345688999999999987665554
No 283
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=23.47 E-value=3e+02 Score=28.73 Aligned_cols=30 Identities=0% Similarity=-0.247 Sum_probs=19.6
Q ss_pred CcceEEEcCCCCEEEEECC---------CCEEEEEcCCC
Q 011014 132 HPKGLAVDDRGNIYIADTM---------NMAIRKISDTG 161 (495)
Q Consensus 132 ~P~GIAVD~dGnIYVAD~~---------N~rIrk~d~~G 161 (495)
....+++++||+.++.-.. ...|++++.++
T Consensus 62 ~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~ 100 (723)
T 1xfd_A 62 RAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPH 100 (723)
T ss_dssp TCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSS
T ss_pred ccceEEECCCCCEEEEEecCccceeecceeeEEEEECCC
Confidence 3678999999994333221 26788888443
No 284
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=21.06 E-value=5e+02 Score=27.14 Aligned_cols=29 Identities=7% Similarity=0.091 Sum_probs=19.1
Q ss_pred cceEEEcCCCC-EE-EEEC-------CCCEEEEEcCCC
Q 011014 133 PKGLAVDDRGN-IY-IADT-------MNMAIRKISDTG 161 (495)
Q Consensus 133 P~GIAVD~dGn-IY-VAD~-------~N~rIrk~d~~G 161 (495)
...+++.+||+ |. .++. ....|++++.++
T Consensus 62 ~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~ 99 (719)
T 1z68_A 62 ASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSN 99 (719)
T ss_dssp CSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTT
T ss_pred eeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCC
Confidence 45889999998 33 3331 146788888554
Done!