Query 011017
Match_columns 495
No_of_seqs 301 out of 1368
Neff 5.3
Searched_HMMs 29240
Date Mon Mar 25 19:05:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011017.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011017hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ctm_A Carbonyl reductase; alc 88.7 0.21 7.2E-06 47.6 2.9 38 455-494 26-63 (279)
2 3ppi_A 3-hydroxyacyl-COA dehyd 88.1 0.34 1.2E-05 46.4 4.0 30 463-494 30-59 (281)
3 3tjr_A Short chain dehydrogena 86.4 0.52 1.8E-05 46.0 4.2 31 462-494 30-60 (301)
4 1xg5_A ARPG836; short chain de 86.1 0.57 2E-05 44.8 4.3 30 463-494 32-61 (279)
5 4imr_A 3-oxoacyl-(acyl-carrier 86.1 0.52 1.8E-05 45.5 4.0 31 462-494 32-62 (275)
6 3uf0_A Short-chain dehydrogena 86.0 0.57 2E-05 45.2 4.2 31 462-494 30-60 (273)
7 1yb1_A 17-beta-hydroxysteroid 85.9 0.59 2E-05 44.7 4.2 29 464-494 32-60 (272)
8 2c07_A 3-oxoacyl-(acyl-carrier 85.9 0.55 1.9E-05 45.2 4.0 29 464-494 45-73 (285)
9 3r1i_A Short-chain type dehydr 85.6 0.78 2.7E-05 44.3 5.0 36 457-494 26-61 (276)
10 4dry_A 3-oxoacyl-[acyl-carrier 85.5 0.57 1.9E-05 45.4 4.0 31 462-494 32-62 (281)
11 3ijr_A Oxidoreductase, short c 85.3 0.64 2.2E-05 45.2 4.2 29 464-494 48-76 (291)
12 3v2g_A 3-oxoacyl-[acyl-carrier 85.2 0.66 2.3E-05 44.7 4.2 34 459-494 27-60 (271)
13 3cxt_A Dehydrogenase with diff 84.8 0.71 2.4E-05 45.0 4.3 30 463-494 34-63 (291)
14 3rih_A Short chain dehydrogena 84.5 0.66 2.3E-05 45.4 4.0 30 463-494 41-70 (293)
15 3r3s_A Oxidoreductase; structu 84.4 0.74 2.5E-05 44.8 4.2 30 463-494 49-78 (294)
16 2qhx_A Pteridine reductase 1; 84.3 0.69 2.4E-05 46.0 4.0 29 464-494 47-75 (328)
17 3kvo_A Hydroxysteroid dehydrog 83.4 0.82 2.8E-05 46.0 4.2 30 463-494 45-74 (346)
18 1p9o_A Phosphopantothenoylcyst 82.8 2.9 9.8E-05 42.2 7.8 68 389-494 15-84 (313)
19 3oec_A Carveol dehydrogenase ( 82.8 0.9 3.1E-05 44.7 4.1 30 463-494 46-75 (317)
20 3grk_A Enoyl-(acyl-carrier-pro 82.1 0.99 3.4E-05 43.9 4.0 32 463-494 31-62 (293)
21 3k31_A Enoyl-(acyl-carrier-pro 81.6 1.1 3.6E-05 43.7 4.0 33 462-494 29-61 (296)
22 1lu9_A Methylene tetrahydromet 78.7 1.6 5.3E-05 42.5 4.2 30 463-494 119-148 (287)
23 2q1s_A Putative nucleotide sug 77.9 1.7 5.8E-05 43.3 4.2 29 464-494 33-62 (377)
24 3nzo_A UDP-N-acetylglucosamine 77.5 1.7 5.8E-05 44.2 4.2 30 463-494 35-65 (399)
25 2x6t_A ADP-L-glycero-D-manno-h 77.3 1.5 5E-05 43.1 3.5 29 464-494 47-76 (357)
26 4f6c_A AUSA reductase domain p 76.8 1.6 5.3E-05 44.4 3.7 31 462-494 68-98 (427)
27 3zu3_A Putative reductase YPO4 75.9 2.3 7.9E-05 44.4 4.7 33 460-494 44-77 (405)
28 3s8m_A Enoyl-ACP reductase; ro 75.4 2.4 8.3E-05 44.5 4.7 32 461-494 59-91 (422)
29 3oh8_A Nucleoside-diphosphate 75.3 2.1 7.1E-05 45.1 4.3 29 464-494 148-176 (516)
30 3rku_A Oxidoreductase YMR226C; 73.1 2 6.9E-05 41.7 3.3 30 463-494 33-65 (287)
31 3lns_A Benzaldehyde dehydrogen 72.6 3.6 0.00012 43.0 5.3 49 440-494 187-235 (457)
32 4dqv_A Probable peptide synthe 71.7 1.9 6.6E-05 44.9 2.9 31 462-494 72-105 (478)
33 3u0b_A Oxidoreductase, short c 70.6 3 0.0001 43.6 4.1 31 462-494 212-242 (454)
34 4eue_A Putative reductase CA_C 69.3 3.6 0.00012 43.0 4.3 32 461-494 58-91 (418)
35 2et6_A (3R)-hydroxyacyl-COA de 68.0 3.6 0.00012 44.7 4.1 30 463-494 322-351 (604)
36 1nvt_A Shikimate 5'-dehydrogen 67.3 3.7 0.00013 39.9 3.7 29 462-494 127-155 (287)
37 3hu5_A Isochorismatase family 67.0 23 0.00077 32.7 8.9 32 462-494 125-156 (204)
38 4f6l_B AUSA reductase domain p 64.5 3.2 0.00011 43.3 2.8 31 462-494 149-179 (508)
39 3tnl_A Shikimate dehydrogenase 63.0 5.9 0.0002 39.7 4.3 33 459-494 150-183 (315)
40 3jx9_A Putative phosphoheptose 62.6 5.9 0.0002 36.5 3.9 73 386-459 80-158 (170)
41 3hdj_A Probable ornithine cycl 61.9 11 0.00037 37.6 6.0 75 407-490 63-146 (313)
42 3t4e_A Quinate/shikimate dehyd 61.9 6.4 0.00022 39.4 4.3 46 446-494 131-177 (312)
43 1nyt_A Shikimate 5-dehydrogena 61.9 6.5 0.00022 37.9 4.3 30 462-494 118-147 (271)
44 1a4s_A ALDH, betaine aldehyde 61.8 8.9 0.0003 40.7 5.7 52 437-494 211-262 (503)
45 4e4g_A Methylmalonate-semialde 61.8 9.7 0.00033 40.7 6.0 51 439-494 219-269 (521)
46 1z7e_A Protein aRNA; rossmann 61.7 8.7 0.0003 41.6 5.7 30 463-494 315-345 (660)
47 3r31_A BADH, betaine aldehyde 61.7 8.9 0.00031 40.9 5.7 51 439-494 207-257 (517)
48 2egg_A AROE, shikimate 5-dehyd 60.7 6.8 0.00023 38.5 4.2 33 459-494 137-170 (297)
49 3ros_A NAD-dependent aldehyde 60.5 9.4 0.00032 40.3 5.5 52 437-494 179-230 (484)
50 4f3x_A Putative aldehyde dehyd 60.4 11 0.00038 39.9 6.1 52 437-494 216-268 (498)
51 3sza_A Aldehyde dehydrogenase, 60.2 6.4 0.00022 41.4 4.2 47 442-494 179-225 (469)
52 3jyo_A Quinate/shikimate dehyd 60.2 7.1 0.00024 38.3 4.3 30 462-494 126-156 (283)
53 4gx0_A TRKA domain protein; me 59.7 6.1 0.00021 41.9 4.0 86 391-494 281-376 (565)
54 3mje_A AMPHB; rossmann fold, o 58.8 8.3 0.00029 40.9 4.8 29 464-494 240-269 (496)
55 1j2r_A Hypothetical isochorism 58.6 67 0.0023 29.1 10.4 37 455-494 126-162 (199)
56 3o8q_A Shikimate 5-dehydrogena 58.3 8.2 0.00028 37.9 4.3 32 460-494 123-155 (281)
57 1p77_A Shikimate 5-dehydrogena 58.2 6 0.0002 38.2 3.3 30 462-494 118-147 (272)
58 3pwz_A Shikimate dehydrogenase 58.0 7.7 0.00026 37.9 4.1 30 462-494 119-149 (272)
59 2fr1_A Erythromycin synthase, 57.6 6.1 0.00021 41.6 3.5 31 462-494 225-256 (486)
60 2z5l_A Tylkr1, tylactone synth 57.1 7.9 0.00027 41.2 4.2 31 462-494 258-289 (511)
61 3i44_A Aldehyde dehydrogenase; 56.9 13 0.00045 39.3 5.9 52 437-494 217-269 (497)
62 1wnd_A Putative betaine aldehy 56.8 12 0.00042 39.6 5.6 51 439-494 215-266 (495)
63 1t90_A MMSDH, probable methylm 56.3 12 0.0004 39.5 5.3 51 439-494 198-248 (486)
64 2d4e_A 5-carboxymethyl-2-hydro 56.0 14 0.00048 39.3 6.0 51 437-494 218-270 (515)
65 3fbt_A Chorismate mutase and s 55.1 9 0.00031 37.8 4.0 34 458-494 117-151 (282)
66 3iwj_A Putative aminoaldehyde 54.8 13 0.00044 39.4 5.4 52 439-494 208-259 (503)
67 3b4w_A Aldehyde dehydrogenase; 54.7 12 0.00041 39.6 5.1 51 439-494 203-253 (495)
68 3qp9_A Type I polyketide synth 54.5 7.3 0.00025 41.5 3.5 30 462-493 250-279 (525)
69 3u4j_A NAD-dependent aldehyde 54.3 15 0.00051 39.3 5.9 51 439-494 218-269 (528)
70 1pqw_A Polyketide synthase; ro 54.3 15 0.00051 32.8 5.1 31 462-494 38-68 (198)
71 2qgz_A Helicase loader, putati 54.1 14 0.00049 36.2 5.3 41 454-494 142-186 (308)
72 2imp_A Lactaldehyde dehydrogen 53.9 14 0.00047 38.8 5.4 51 439-494 199-250 (479)
73 2j6l_A Aldehyde dehydrogenase 53.8 16 0.00055 38.6 6.0 51 439-494 218-268 (500)
74 3irv_A Cysteine hydrolase; str 53.7 75 0.0026 29.9 10.2 33 461-494 137-169 (233)
75 4h7n_A Aldehyde dehydrogenase; 53.2 13 0.00043 39.1 5.0 47 441-494 185-231 (474)
76 4ggo_A Trans-2-enoyl-COA reduc 52.8 13 0.00043 38.9 4.8 32 461-494 48-80 (401)
77 3ek1_A Aldehyde dehydrogenase; 51.5 17 0.00059 38.5 5.8 52 439-494 225-276 (504)
78 3rh9_A Succinate-semialdehyde 51.2 15 0.00051 39.1 5.2 52 437-494 203-255 (506)
79 3oj0_A Glutr, glutamyl-tRNA re 50.7 5.8 0.0002 34.0 1.6 29 463-494 21-49 (144)
80 1bxs_A Aldehyde dehydrogenase; 50.6 20 0.00068 38.0 6.1 51 439-494 216-268 (501)
81 3v4c_A Aldehyde dehydrogenase 50.5 19 0.00064 38.4 5.8 49 441-494 234-285 (528)
82 1o04_A Aldehyde dehydrogenase, 50.5 19 0.00065 38.2 5.9 51 439-494 215-267 (500)
83 2od4_A Hypothetical protein; m 50.4 0.56 1.9E-05 38.2 -4.5 48 409-466 35-83 (101)
84 3ju8_A Succinylglutamic semial 50.4 14 0.0005 38.8 4.9 49 439-492 196-244 (490)
85 3k2w_A Betaine-aldehyde dehydr 50.0 14 0.00049 39.0 4.8 51 439-494 205-256 (497)
86 3don_A Shikimate dehydrogenase 49.6 8.9 0.0003 37.7 2.9 31 461-494 115-146 (277)
87 1im5_A 180AA long hypothetical 49.1 65 0.0022 28.7 8.5 37 455-494 114-150 (180)
88 1ez0_A ALDH, aldehyde dehydrog 49.0 20 0.00069 37.9 5.8 51 439-494 199-252 (510)
89 2oqb_A Histone-arginine methyl 49.0 6.9 0.00024 34.1 1.8 58 409-478 11-72 (117)
90 3ifg_A Succinate-semialdehyde 49.0 17 0.00059 38.3 5.3 49 441-494 207-256 (484)
91 3jz4_A Succinate-semialdehyde 48.9 16 0.00056 38.3 5.0 53 437-494 201-253 (481)
92 1npy_A Hypothetical shikimate 48.5 11 0.00036 36.9 3.3 45 446-494 103-148 (271)
93 4gel_A Mitochondrial cardiolip 48.4 39 0.0013 30.9 7.0 78 397-476 84-176 (220)
94 2i99_A MU-crystallin homolog; 47.8 40 0.0014 33.0 7.4 83 408-494 70-165 (312)
95 3r64_A NAD dependent benzaldeh 47.8 23 0.00079 37.5 6.0 51 439-494 206-259 (508)
96 2o7s_A DHQ-SDH PR, bifunctiona 46.4 11 0.00037 40.1 3.2 28 464-494 365-392 (523)
97 4dng_A Uncharacterized aldehyd 46.3 18 0.00062 37.9 4.9 51 439-494 201-252 (485)
98 1uzb_A 1-pyrroline-5-carboxyla 46.3 24 0.00082 37.5 5.8 51 439-494 230-287 (516)
99 2o2p_A Formyltetrahydrofolate 46.0 24 0.00081 37.6 5.8 51 437-494 234-287 (517)
100 1x9g_A Putative MAR1; structur 45.8 1.1E+02 0.0038 28.1 9.8 32 462-494 106-137 (200)
101 3c85_A Putative glutathione-re 45.6 16 0.00056 32.2 3.8 28 464-494 40-68 (183)
102 3etf_A Putative succinate-semi 45.1 21 0.0007 37.2 5.0 51 439-494 183-233 (462)
103 2b34_A F35G2.2, MAR1 ribonucle 45.1 57 0.0019 30.0 7.6 90 392-494 33-131 (199)
104 4ggj_A Mitochondrial cardiolip 44.3 26 0.0009 32.1 5.1 53 397-449 72-134 (196)
105 2y53_A Aldehyde dehydrogenase 43.7 17 0.00059 38.7 4.2 47 441-494 211-259 (534)
106 2pff_A Fatty acid synthase sub 41.3 14 0.00046 44.9 3.2 29 464-494 477-506 (1688)
107 3ed6_A Betaine aldehyde dehydr 40.8 33 0.0011 36.5 5.9 51 439-494 227-278 (520)
108 2uv9_A Fatty acid synthase alp 40.7 18 0.00063 44.5 4.3 31 462-494 651-682 (1878)
109 4h17_A Hydrolase, isochorismat 40.2 1.2E+02 0.004 27.8 8.9 97 392-494 45-153 (197)
110 2ve5_A BADH, betaine aldehyde 40.0 32 0.0011 36.1 5.6 51 439-494 199-251 (490)
111 2w58_A DNAI, primosome compone 40.0 37 0.0013 30.1 5.3 38 456-493 45-86 (202)
112 2hk9_A Shikimate dehydrogenase 39.7 19 0.00066 34.6 3.6 30 462-494 128-157 (275)
113 1jw9_B Molybdopterin biosynthe 39.6 23 0.00079 33.7 4.1 28 464-494 32-60 (249)
114 2uv8_A Fatty acid synthase sub 39.4 19 0.00063 44.5 4.0 30 463-494 675-705 (1887)
115 3tg2_A Vibriobactin-specific i 39.2 1.4E+02 0.0047 28.0 9.4 32 462-494 137-168 (223)
116 3ond_A Adenosylhomocysteinase; 38.4 24 0.00083 37.6 4.3 30 462-494 264-293 (488)
117 3qan_A 1-pyrroline-5-carboxyla 38.2 27 0.00092 37.4 4.7 51 439-494 229-286 (538)
118 1vq2_A DCMP deaminase, deoxycy 37.9 23 0.0008 32.7 3.7 65 401-493 108-172 (193)
119 1pq3_A Arginase II, mitochondr 37.3 60 0.0021 31.8 6.8 97 391-493 68-194 (306)
120 3ih5_A Electron transfer flavo 37.1 24 0.00081 33.3 3.7 84 397-488 23-113 (217)
121 2w8n_A Succinate-semialdehyde 36.9 22 0.00076 37.4 3.8 51 439-494 203-257 (487)
122 2kjq_A DNAA-related protein; s 36.7 42 0.0014 29.1 5.0 45 447-493 22-68 (149)
123 2fq1_A Isochorismatase; ENTB, 36.6 2.4E+02 0.0082 27.0 11.0 33 461-494 143-175 (287)
124 3mcw_A Putative hydrolase; iso 35.5 1.5E+02 0.0051 26.9 8.8 33 461-494 111-143 (198)
125 1jvb_A NAD(H)-dependent alcoho 35.3 44 0.0015 32.8 5.4 31 462-494 170-201 (347)
126 1uxt_A Glyceraldehyde-3-phosph 35.1 40 0.0014 35.6 5.4 49 439-494 214-262 (501)
127 1v3u_A Leukotriene B4 12- hydr 35.0 49 0.0017 32.0 5.7 32 461-494 144-175 (333)
128 1omo_A Alanine dehydrogenase; 34.9 92 0.0031 30.7 7.7 81 408-491 61-151 (322)
129 3oqp_A Putative isochorismatas 34.7 97 0.0033 28.8 7.5 33 461-494 107-139 (211)
130 3slk_A Polyketide synthase ext 34.6 25 0.00085 39.4 3.8 30 462-493 529-560 (795)
131 3kl2_A Putative isochorismatas 33.7 1.4E+02 0.0047 27.9 8.4 33 461-494 149-181 (226)
132 3u62_A Shikimate dehydrogenase 33.6 31 0.0011 33.1 4.0 27 465-494 110-137 (253)
133 3zen_D Fatty acid synthase; tr 33.4 27 0.00092 45.2 4.3 30 463-494 2136-2166(3089)
134 1jzt_A Hypothetical 27.5 kDa p 33.2 37 0.0013 32.7 4.4 31 464-494 60-90 (246)
135 3eef_A N-carbamoylsarcosine am 32.5 2.6E+02 0.009 24.7 10.7 96 393-494 25-140 (182)
136 2a67_A Isochorismatase family 32.2 1.5E+02 0.0051 26.1 8.0 95 392-494 26-131 (167)
137 4eye_A Probable oxidoreductase 32.2 1.2E+02 0.0039 29.7 7.9 77 408-494 100-189 (342)
138 2hcy_A Alcohol dehydrogenase 1 32.2 56 0.0019 31.9 5.6 31 462-494 169-199 (347)
139 3phh_A Shikimate dehydrogenase 32.0 39 0.0013 33.0 4.3 29 463-494 118-146 (269)
140 3jyn_A Quinone oxidoreductase; 31.7 51 0.0018 31.9 5.2 32 461-494 139-170 (325)
141 2eih_A Alcohol dehydrogenase; 31.6 51 0.0018 32.2 5.2 31 462-494 166-196 (343)
142 3txy_A Isochorismatase family 31.5 1E+02 0.0036 28.0 7.0 33 461-494 124-156 (199)
143 1wly_A CAAR, 2-haloacrylate re 31.4 49 0.0017 32.1 5.0 31 462-494 145-175 (333)
144 3prl_A NADP-dependent glyceral 31.3 39 0.0013 35.7 4.6 49 439-494 209-258 (505)
145 1win_A Flotillin 2; BAND 7 dom 31.3 32 0.0011 30.0 3.3 30 391-420 91-121 (143)
146 1yb5_A Quinone oxidoreductase; 31.2 1E+02 0.0034 30.4 7.3 31 462-494 170-200 (351)
147 1yac_A Ycacgp, YCAC gene produ 31.2 86 0.0029 28.9 6.4 93 393-494 34-135 (208)
148 2o8n_A APOA-I binding protein; 31.1 40 0.0014 32.9 4.3 31 464-494 81-111 (265)
149 2gpj_A Siderophore-interacting 30.2 84 0.0029 29.5 6.3 72 410-491 137-217 (252)
150 2wme_A BADH, betaine aldehyde 29.5 49 0.0017 35.0 4.9 53 437-494 198-251 (490)
151 3k6j_A Protein F01G10.3, confi 29.4 51 0.0018 34.7 5.0 34 458-494 49-82 (460)
152 3m1r_A Formimidoylglutamase; s 29.1 62 0.0021 32.2 5.4 99 389-493 97-212 (322)
153 1qor_A Quinone oxidoreductase; 29.1 61 0.0021 31.3 5.2 31 462-494 140-170 (327)
154 2aeb_A Arginase 1; hydrolase, 28.9 80 0.0027 31.2 6.1 97 391-493 72-198 (322)
155 1leh_A Leucine dehydrogenase; 28.7 40 0.0014 34.3 4.0 30 463-495 173-202 (364)
156 3d3k_A Enhancer of mRNA-decapp 28.7 54 0.0018 31.7 4.7 31 464-494 87-117 (259)
157 3hb7_A Isochorismatase hydrola 28.6 2.9E+02 0.0098 25.1 9.5 33 461-494 118-150 (204)
158 3qwb_A Probable quinone oxidor 28.6 68 0.0023 31.1 5.5 32 461-494 147-178 (334)
159 3pzg_A Mannan endo-1,4-beta-ma 28.4 66 0.0023 32.9 5.5 77 396-494 42-118 (383)
160 4b7c_A Probable oxidoreductase 28.4 65 0.0022 31.2 5.3 32 461-494 148-179 (336)
161 3haz_A Proline dehydrogenase; 28.2 55 0.0019 37.9 5.3 53 436-494 704-759 (1001)
162 2d5c_A AROE, shikimate 5-dehyd 28.2 45 0.0016 31.5 4.0 27 465-494 118-144 (263)
163 2j3h_A NADP-dependent oxidored 28.1 70 0.0024 31.1 5.5 31 462-494 155-185 (345)
164 3lqy_A Putative isochorismatas 27.8 3.3E+02 0.011 24.3 9.8 33 461-494 111-143 (190)
165 1nba_A N-carbamoylsarcosine am 27.8 2.3E+02 0.0079 27.2 9.1 37 455-494 158-194 (264)
166 1yzv_A Hypothetical protein; s 27.3 1.7E+02 0.0058 26.9 7.8 33 461-494 108-140 (204)
167 3pqa_A Lactaldehyde dehydrogen 27.1 56 0.0019 34.4 4.8 48 439-493 191-239 (486)
168 3ty7_A Putative aldehyde dehyd 27.0 22 0.00075 37.2 1.7 50 439-494 196-247 (478)
169 3d6n_B Aspartate carbamoyltran 27.0 1.1E+02 0.0037 30.4 6.6 89 406-494 56-177 (291)
170 4g1v_A Flavohemoglobin; three 26.6 64 0.0022 32.3 5.0 54 433-491 325-381 (399)
171 3ot4_A Putative isochorismatas 25.8 3.3E+02 0.011 25.6 9.6 32 462-494 158-189 (236)
172 2zb4_A Prostaglandin reductase 25.7 52 0.0018 32.3 4.1 29 464-494 162-191 (357)
173 1iz0_A Quinone oxidoreductase; 25.6 1.4E+02 0.0047 28.4 7.0 33 460-494 123-155 (302)
174 3gms_A Putative NADPH:quinone 25.5 76 0.0026 30.9 5.2 32 461-494 143-174 (340)
175 4gim_A Pseudouridine-5'-phosph 25.1 34 0.0012 34.8 2.6 68 385-487 263-332 (335)
176 3pzl_A Agmatine ureohydrolase; 25.0 43 0.0015 33.4 3.3 94 389-492 93-199 (313)
177 2j8z_A Quinone oxidoreductase; 24.9 86 0.003 30.8 5.5 31 462-494 162-192 (354)
178 3d3j_A Enhancer of mRNA-decapp 24.5 56 0.0019 32.5 4.0 30 465-494 135-164 (306)
179 2g0t_A Conserved hypothetical 24.3 1.3E+02 0.0046 30.4 6.9 89 395-494 104-203 (350)
180 1zcj_A Peroxisomal bifunctiona 24.2 68 0.0023 33.4 4.8 31 461-494 35-65 (463)
181 2gks_A Bifunctional SAT/APS ki 24.0 1.3E+02 0.0043 32.2 6.9 87 406-494 294-405 (546)
182 2vz8_A Fatty acid synthase; tr 23.9 45 0.0016 42.3 3.9 28 463-492 1884-1911(2512)
183 3qks_C DNA double-strand break 23.9 17 0.00058 24.8 0.1 24 385-408 2-25 (34)
184 3ps9_A TRNA 5-methylaminomethy 23.8 67 0.0023 34.7 4.8 31 461-494 270-300 (676)
185 1euh_A NADP dependent non phos 23.8 70 0.0024 33.4 4.8 48 439-493 200-248 (475)
186 4ekn_B Aspartate carbamoyltran 23.8 1.6E+02 0.0054 29.3 7.1 89 406-494 62-183 (306)
187 2eez_A Alanine dehydrogenase; 23.6 64 0.0022 32.3 4.3 28 464-494 167-194 (369)
188 4dup_A Quinone oxidoreductase; 23.5 1.9E+02 0.0064 28.3 7.7 32 461-494 166-197 (353)
189 1xa0_A Putative NADPH dependen 23.3 1.8E+02 0.0061 27.9 7.4 34 459-494 146-179 (328)
190 3pvc_A TRNA 5-methylaminomethy 22.9 59 0.002 35.3 4.2 30 462-494 263-292 (689)
191 1tt7_A YHFP; alcohol dehydroge 22.7 1.7E+02 0.0059 28.0 7.1 34 459-494 147-180 (330)
192 4e3x_A Delta-1-pyrroline-5-car 22.6 91 0.0031 33.5 5.5 47 439-490 256-303 (563)
193 3nio_A Guanidinobutyrase; PA14 22.6 89 0.003 31.0 5.1 97 391-493 100-212 (319)
194 1pjc_A Protein (L-alanine dehy 22.2 71 0.0024 31.9 4.3 28 464-494 168-195 (361)
195 4ghk_A Gamma-glutamyl phosphat 22.0 68 0.0023 33.2 4.2 40 441-484 198-238 (444)
196 1woh_A Agmatinase; alpha/beta 21.8 1.4E+02 0.0048 29.2 6.3 97 389-493 90-202 (305)
197 2h5g_A Delta 1-pyrroline-5-car 21.8 48 0.0016 34.7 3.0 16 160-175 3-18 (463)
198 3szu_A ISPH, 4-hydroxy-3-methy 21.7 1.3E+02 0.0044 30.5 6.0 76 393-493 25-104 (328)
199 3d4o_A Dipicolinate synthase s 21.7 77 0.0026 30.5 4.3 29 463-494 155-183 (293)
200 1o20_A Gamma-glutamyl phosphat 21.7 69 0.0024 32.9 4.2 43 439-485 184-227 (427)
201 2rgh_A Alpha-glycerophosphate 21.5 40 0.0014 35.9 2.4 31 461-494 30-60 (571)
202 3nx4_A Putative oxidoreductase 21.5 1.9E+02 0.0066 27.5 7.2 61 431-494 100-176 (324)
203 3fmw_A Oxygenase; mithramycin, 21.5 57 0.002 34.8 3.6 29 463-494 49-77 (570)
204 2dx6_A Hypothetical protein TT 21.5 2.2E+02 0.0076 24.9 7.0 59 359-422 58-116 (159)
205 3c4n_A Uncharacterized protein 21.3 59 0.002 32.4 3.5 32 460-494 33-66 (405)
206 1y81_A Conserved hypothetical 21.3 79 0.0027 27.3 3.9 31 463-493 14-45 (138)
207 3iwh_A Rhodanese-like domain p 21.1 1.1E+02 0.0037 25.0 4.6 35 456-493 50-84 (103)
208 3sl1_A Arginase; metallohydrol 20.9 1.3E+02 0.0043 31.5 5.9 99 389-493 164-291 (413)
209 1gq6_A Proclavaminate amidino 20.9 92 0.0031 30.6 4.8 97 391-493 92-204 (313)
210 4a8p_A Putrescine carbamoyltra 20.6 3E+02 0.01 28.0 8.5 87 406-494 63-182 (355)
211 1umk_A B5R, NADH-cytochrome B5 20.5 67 0.0023 30.2 3.5 39 450-491 227-268 (275)
212 3rss_A Putative uncharacterize 20.4 65 0.0022 34.3 3.7 41 454-494 42-84 (502)
213 2rir_A Dipicolinate synthase, 20.4 85 0.0029 30.3 4.3 29 463-494 157-185 (300)
214 3tum_A Shikimate dehydrogenase 20.2 86 0.003 30.4 4.3 43 446-491 108-150 (269)
215 4fvg_A Stomatin; mixed alpha-b 20.1 71 0.0024 27.4 3.3 28 391-418 86-114 (133)
No 1
>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}
Probab=88.71 E-value=0.21 Score=47.64 Aligned_cols=38 Identities=21% Similarity=0.282 Sum_probs=31.1
Q ss_pred hhhcCCCCCceEEEeccCCchhHHHHHHHHHhhcCcEeee
Q 011017 455 VVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVSF 494 (495)
Q Consensus 455 v~~~ip~~~~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~~ 494 (495)
+.+..+-.-|.|++||++ +-+|+++|..|.++|.+|++
T Consensus 26 ~~~~~~l~~k~vlITGas--ggIG~~la~~L~~~G~~V~~ 63 (279)
T 3ctm_A 26 VLDLFSLKGKVASVTGSS--GGIGWAVAEAYAQAGADVAI 63 (279)
T ss_dssp GGGGGCCTTCEEEETTTT--SSHHHHHHHHHHHHTCEEEE
T ss_pred cccccCCCCCEEEEECCC--cHHHHHHHHHHHHCCCEEEE
Confidence 344444445789999999 68999999999999999975
No 2
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=88.13 E-value=0.34 Score=46.37 Aligned_cols=30 Identities=20% Similarity=0.302 Sum_probs=27.3
Q ss_pred CceEEEeccCCchhHHHHHHHHHhhcCcEeee
Q 011017 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVSF 494 (495)
Q Consensus 463 ~~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~~ 494 (495)
-|.|++||++ +-+|+++|..|+++|.+|++
T Consensus 30 ~k~vlVTGas--~GIG~aia~~l~~~G~~Vi~ 59 (281)
T 3ppi_A 30 GASAIVSGGA--GGLGEATVRRLHADGLGVVI 59 (281)
T ss_dssp TEEEEEETTT--SHHHHHHHHHHHHTTCEEEE
T ss_pred CCEEEEECCC--ChHHHHHHHHHHHCCCEEEE
Confidence 4679999999 68999999999999999976
No 3
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=86.41 E-value=0.52 Score=46.04 Aligned_cols=31 Identities=13% Similarity=0.293 Sum_probs=27.7
Q ss_pred CCceEEEeccCCchhHHHHHHHHHhhcCcEeee
Q 011017 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVSF 494 (495)
Q Consensus 462 ~~~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~~ 494 (495)
.-|.|++||++ +-+|+++|..|+++|.+|++
T Consensus 30 ~gk~vlVTGas--~gIG~~la~~l~~~G~~V~~ 60 (301)
T 3tjr_A 30 DGRAAVVTGGA--SGIGLATATEFARRGARLVL 60 (301)
T ss_dssp TTCEEEEETTT--SHHHHHHHHHHHHTTCEEEE
T ss_pred CCCEEEEeCCC--CHHHHHHHHHHHHCCCEEEE
Confidence 34679999999 68999999999999999976
No 4
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=86.08 E-value=0.57 Score=44.75 Aligned_cols=30 Identities=33% Similarity=0.408 Sum_probs=27.3
Q ss_pred CceEEEeccCCchhHHHHHHHHHhhcCcEeee
Q 011017 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVSF 494 (495)
Q Consensus 463 ~~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~~ 494 (495)
-|.|++||++ +-+|+++|..|.++|.+|++
T Consensus 32 ~k~vlVTGas--ggIG~~la~~l~~~G~~V~~ 61 (279)
T 1xg5_A 32 DRLALVTGAS--GGIGAAVARALVQQGLKVVG 61 (279)
T ss_dssp TCEEEEESTT--SHHHHHHHHHHHHTTCEEEE
T ss_pred CCEEEEECCC--chHHHHHHHHHHHCCCEEEE
Confidence 3679999999 69999999999999999975
No 5
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=86.07 E-value=0.52 Score=45.49 Aligned_cols=31 Identities=23% Similarity=0.371 Sum_probs=27.9
Q ss_pred CCceEEEeccCCchhHHHHHHHHHhhcCcEeee
Q 011017 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVSF 494 (495)
Q Consensus 462 ~~~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~~ 494 (495)
.-|-|++||++ +-+|+|+|..|+++|.+|++
T Consensus 32 ~gk~~lVTGas--~GIG~aia~~la~~G~~V~~ 62 (275)
T 4imr_A 32 RGRTALVTGSS--RGIGAAIAEGLAGAGAHVIL 62 (275)
T ss_dssp TTCEEEETTCS--SHHHHHHHHHHHHTTCEEEE
T ss_pred CCCEEEEECCC--CHHHHHHHHHHHHCCCEEEE
Confidence 44779999999 68999999999999999975
No 6
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=86.01 E-value=0.57 Score=45.16 Aligned_cols=31 Identities=16% Similarity=0.265 Sum_probs=27.8
Q ss_pred CCceEEEeccCCchhHHHHHHHHHhhcCcEeee
Q 011017 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVSF 494 (495)
Q Consensus 462 ~~~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~~ 494 (495)
.-|-|++||++ +-+|+++|..|+++|.+|++
T Consensus 30 ~gk~~lVTGas--~GIG~aia~~la~~G~~V~~ 60 (273)
T 3uf0_A 30 AGRTAVVTGAG--SGIGRAIAHGYARAGAHVLA 60 (273)
T ss_dssp TTCEEEEETTT--SHHHHHHHHHHHHTTCEEEE
T ss_pred CCCEEEEeCCC--cHHHHHHHHHHHHCCCEEEE
Confidence 44679999999 68999999999999999975
No 7
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=85.92 E-value=0.59 Score=44.67 Aligned_cols=29 Identities=17% Similarity=0.290 Sum_probs=26.8
Q ss_pred ceEEEeccCCchhHHHHHHHHHhhcCcEeee
Q 011017 464 AHVLLRGTVTANKVANAVASSLCQMGIKVSF 494 (495)
Q Consensus 464 ~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~~ 494 (495)
|.|++||++ +-+|+++|..|.++|.+|++
T Consensus 32 k~vlITGas--ggIG~~la~~L~~~G~~V~~ 60 (272)
T 1yb1_A 32 EIVLITGAG--HGIGRLTAYEFAKLKSKLVL 60 (272)
T ss_dssp CEEEEETTT--SHHHHHHHHHHHHTTCEEEE
T ss_pred CEEEEECCC--chHHHHHHHHHHHCCCEEEE
Confidence 679999999 68999999999999999875
No 8
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=85.88 E-value=0.55 Score=45.20 Aligned_cols=29 Identities=17% Similarity=0.179 Sum_probs=26.9
Q ss_pred ceEEEeccCCchhHHHHHHHHHhhcCcEeee
Q 011017 464 AHVLLRGTVTANKVANAVASSLCQMGIKVSF 494 (495)
Q Consensus 464 ~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~~ 494 (495)
|.|++||++ +-+|+++|..|+++|.+|++
T Consensus 45 k~vlITGas--ggIG~~la~~L~~~G~~V~~ 73 (285)
T 2c07_A 45 KVALVTGAG--RGIGREIAKMLAKSVSHVIC 73 (285)
T ss_dssp CEEEEESTT--SHHHHHHHHHHTTTSSEEEE
T ss_pred CEEEEECCC--cHHHHHHHHHHHHcCCEEEE
Confidence 679999999 69999999999999999975
No 9
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=85.59 E-value=0.78 Score=44.25 Aligned_cols=36 Identities=17% Similarity=0.320 Sum_probs=29.9
Q ss_pred hcCCCCCceEEEeccCCchhHHHHHHHHHhhcCcEeee
Q 011017 457 NSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVSF 494 (495)
Q Consensus 457 ~~ip~~~~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~~ 494 (495)
+...-.-|.|++||++ +=+|+++|..|+++|.+|++
T Consensus 26 ~~~~l~gk~~lVTGas--~GIG~aia~~la~~G~~V~~ 61 (276)
T 3r1i_A 26 DLFDLSGKRALITGAS--TGIGKKVALAYAEAGAQVAV 61 (276)
T ss_dssp GGGCCTTCEEEEESTT--SHHHHHHHHHHHHTTCEEEE
T ss_pred cccCCCCCEEEEeCCC--CHHHHHHHHHHHHCCCEEEE
Confidence 3333345789999999 68999999999999999975
No 10
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=85.51 E-value=0.57 Score=45.38 Aligned_cols=31 Identities=23% Similarity=0.282 Sum_probs=27.0
Q ss_pred CCceEEEeccCCchhHHHHHHHHHhhcCcEeee
Q 011017 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVSF 494 (495)
Q Consensus 462 ~~~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~~ 494 (495)
.-|-|++||++ +-+|+|||..|+++|.+|++
T Consensus 32 ~gk~~lVTGas--~GIG~aia~~la~~G~~V~~ 62 (281)
T 4dry_A 32 EGRIALVTGGG--TGVGRGIAQALSAEGYSVVI 62 (281)
T ss_dssp --CEEEETTTT--SHHHHHHHHHHHHTTCEEEE
T ss_pred CCCEEEEeCCC--CHHHHHHHHHHHHCCCEEEE
Confidence 34679999999 68999999999999999976
No 11
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=85.35 E-value=0.64 Score=45.18 Aligned_cols=29 Identities=21% Similarity=0.428 Sum_probs=26.8
Q ss_pred ceEEEeccCCchhHHHHHHHHHhhcCcEeee
Q 011017 464 AHVLLRGTVTANKVANAVASSLCQMGIKVSF 494 (495)
Q Consensus 464 ~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~~ 494 (495)
|.|++||++ +-+|+++|..|.++|.+|++
T Consensus 48 k~vlVTGas--~GIG~aia~~la~~G~~V~~ 76 (291)
T 3ijr_A 48 KNVLITGGD--SGIGRAVSIAFAKEGANIAI 76 (291)
T ss_dssp CEEEEETTT--SHHHHHHHHHHHHTTCEEEE
T ss_pred CEEEEeCCC--cHHHHHHHHHHHHCCCEEEE
Confidence 679999999 68999999999999999975
No 12
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=85.20 E-value=0.66 Score=44.66 Aligned_cols=34 Identities=18% Similarity=0.307 Sum_probs=29.1
Q ss_pred CCCCCceEEEeccCCchhHHHHHHHHHhhcCcEeee
Q 011017 459 LPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVSF 494 (495)
Q Consensus 459 ip~~~~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~~ 494 (495)
+.-.-|-|++||++ +=+|+|||..|+++|.+|++
T Consensus 27 ~~l~gk~~lVTGas--~GIG~aia~~la~~G~~V~~ 60 (271)
T 3v2g_A 27 ISLAGKTAFVTGGS--RGIGAAIAKRLALEGAAVAL 60 (271)
T ss_dssp TCCTTCEEEEETTT--SHHHHHHHHHHHHTTCEEEE
T ss_pred cCCCCCEEEEeCCC--cHHHHHHHHHHHHCCCEEEE
Confidence 33345789999999 68999999999999999975
No 13
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=84.75 E-value=0.71 Score=44.98 Aligned_cols=30 Identities=23% Similarity=0.376 Sum_probs=27.4
Q ss_pred CceEEEeccCCchhHHHHHHHHHhhcCcEeee
Q 011017 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVSF 494 (495)
Q Consensus 463 ~~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~~ 494 (495)
-|.|++||++ +-+|+++|..|.++|.+|++
T Consensus 34 ~k~vlVTGas--~gIG~aia~~L~~~G~~V~~ 63 (291)
T 3cxt_A 34 GKIALVTGAS--YGIGFAIASAYAKAGATIVF 63 (291)
T ss_dssp TCEEEEETCS--SHHHHHHHHHHHHTTCEEEE
T ss_pred CCEEEEeCCC--cHHHHHHHHHHHHCCCEEEE
Confidence 4679999999 69999999999999999975
No 14
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=84.53 E-value=0.66 Score=45.38 Aligned_cols=30 Identities=20% Similarity=0.433 Sum_probs=27.4
Q ss_pred CceEEEeccCCchhHHHHHHHHHhhcCcEeee
Q 011017 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVSF 494 (495)
Q Consensus 463 ~~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~~ 494 (495)
-|.|++||++ +-+|++||..|.++|.+|++
T Consensus 41 ~k~vlVTGas--~GIG~aia~~la~~G~~V~~ 70 (293)
T 3rih_A 41 ARSVLVTGGT--KGIGRGIATVFARAGANVAV 70 (293)
T ss_dssp TCEEEETTTT--SHHHHHHHHHHHHTTCEEEE
T ss_pred CCEEEEeCCC--cHHHHHHHHHHHHCCCEEEE
Confidence 4679999999 68999999999999999976
No 15
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=84.43 E-value=0.74 Score=44.78 Aligned_cols=30 Identities=20% Similarity=0.313 Sum_probs=27.3
Q ss_pred CceEEEeccCCchhHHHHHHHHHhhcCcEeee
Q 011017 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVSF 494 (495)
Q Consensus 463 ~~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~~ 494 (495)
-|.|++||++ +-+|+++|..|.++|.+|++
T Consensus 49 ~k~vlVTGas--~GIG~aia~~la~~G~~V~~ 78 (294)
T 3r3s_A 49 DRKALVTGGD--SGIGRAAAIAYAREGADVAI 78 (294)
T ss_dssp TCEEEEETTT--SHHHHHHHHHHHHTTCEEEE
T ss_pred CCEEEEeCCC--cHHHHHHHHHHHHCCCEEEE
Confidence 3689999999 68999999999999999976
No 16
>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2
Probab=84.29 E-value=0.69 Score=45.96 Aligned_cols=29 Identities=21% Similarity=0.416 Sum_probs=26.9
Q ss_pred ceEEEeccCCchhHHHHHHHHHhhcCcEeee
Q 011017 464 AHVLLRGTVTANKVANAVASSLCQMGIKVSF 494 (495)
Q Consensus 464 ~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~~ 494 (495)
|.|++||++ +-+|++||..|+++|.+|++
T Consensus 47 k~~lVTGas--~GIG~aia~~La~~G~~Vv~ 75 (328)
T 2qhx_A 47 PVALVTGAA--KRLGRSIAEGLHAEGYAVCL 75 (328)
T ss_dssp CEEEETTCS--SHHHHHHHHHHHHTTCEEEE
T ss_pred CEEEEECCC--CHHHHHHHHHHHHCCCEEEE
Confidence 679999999 69999999999999999975
No 17
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=83.45 E-value=0.82 Score=46.03 Aligned_cols=30 Identities=17% Similarity=0.338 Sum_probs=27.4
Q ss_pred CceEEEeccCCchhHHHHHHHHHhhcCcEeee
Q 011017 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVSF 494 (495)
Q Consensus 463 ~~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~~ 494 (495)
-|-|++||++ +-+|+|||..|.++|.+|++
T Consensus 45 gk~vlVTGas--~GIG~aia~~La~~Ga~Vvl 74 (346)
T 3kvo_A 45 GCTVFITGAS--RGIGKAIALKAAKDGANIVI 74 (346)
T ss_dssp TCEEEEETTT--SHHHHHHHHHHHTTTCEEEE
T ss_pred CCEEEEeCCC--hHHHHHHHHHHHHCCCEEEE
Confidence 3679999999 69999999999999999976
No 18
>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1
Probab=82.81 E-value=2.9 Score=42.22 Aligned_cols=68 Identities=19% Similarity=0.333 Sum_probs=44.4
Q ss_pred chhhhhhHHHHHHHHHHHHhcCCe-EEEeccccccccccccc-eeeeccCCCCcceEEecCCchhhHhhhhcCCCCCceE
Q 011017 389 PWRREAINSLIEEAILEADAKGVK-VISLGLLNQGEELNRNG-EIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKTTAHV 466 (495)
Q Consensus 389 ~~~~~~in~~ie~ai~~a~~~g~k-v~sl~~ln~~~~ln~~g-~~~~~~~p~~l~~~vv~g~~l~~a~v~~~ip~~~~~v 466 (495)
|.+.+.|=..|++.+...+..|-| |+ .-.|| .-.++|+| ||.
T Consensus 15 p~~~~~i~~~i~~~~~~~~l~gk~~VL----------ITaGgT~EpID~Dp----VRf---------------------- 58 (313)
T 1p9o_A 15 PPGAARWAEVMARFAARLGAQGRRVVL----------VTSGGTKVPLEARP----VRF---------------------- 58 (313)
T ss_dssp -----CHHHHHHHHHHHHHHTTCCEEE----------EEESBCEEESSSSC----SEE----------------------
T ss_pred cccHHHHHHHHHHHhhhhhhcCCeEEE----------EeCCCcccccCCCc----eeE----------------------
Confidence 667777777787777666666666 32 12344 35566778 664
Q ss_pred EEeccCCchhHHHHHHHHHhhcCcEeee
Q 011017 467 LLRGTVTANKVANAVASSLCQMGIKVSF 494 (495)
Q Consensus 467 ~l~g~~~~~k~~~a~a~~lc~~~~~v~~ 494 (495)
++--.| +|.|.|+|.++.+||.+|++
T Consensus 59 -ItN~SS-GkmG~aiAe~~~~~Ga~V~l 84 (313)
T 1p9o_A 59 -LDNFSS-GRRGATSAEAFLAAGYGVLF 84 (313)
T ss_dssp -EEECCC-CHHHHHHHHHHHHTTCEEEE
T ss_pred -ecCCCC-cHHHHHHHHHHHHCCCEEEE
Confidence 443344 79999999999999999986
No 19
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=82.79 E-value=0.9 Score=44.73 Aligned_cols=30 Identities=17% Similarity=0.192 Sum_probs=27.3
Q ss_pred CceEEEeccCCchhHHHHHHHHHhhcCcEeee
Q 011017 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVSF 494 (495)
Q Consensus 463 ~~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~~ 494 (495)
-|-|++||++ +-+|+++|..|.++|.+|++
T Consensus 46 gk~~lVTGas--~GIG~aia~~la~~G~~Vv~ 75 (317)
T 3oec_A 46 GKVAFITGAA--RGQGRTHAVRLAQDGADIVA 75 (317)
T ss_dssp TCEEEESSCS--SHHHHHHHHHHHHTTCEEEE
T ss_pred CCEEEEeCCC--cHHHHHHHHHHHHCCCeEEE
Confidence 3679999999 68999999999999999975
No 20
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=82.05 E-value=0.99 Score=43.93 Aligned_cols=32 Identities=19% Similarity=0.328 Sum_probs=26.9
Q ss_pred CceEEEeccCCchhHHHHHHHHHhhcCcEeee
Q 011017 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVSF 494 (495)
Q Consensus 463 ~~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~~ 494 (495)
-|-|++||+++++=+|+++|..|.++|.+|++
T Consensus 31 gk~~lVTGasg~~GIG~aia~~la~~G~~V~~ 62 (293)
T 3grk_A 31 GKRGLILGVANNRSIAWGIAKAAREAGAELAF 62 (293)
T ss_dssp TCEEEEECCCSSSSHHHHHHHHHHHTTCEEEE
T ss_pred CCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEE
Confidence 36799999994223999999999999999975
No 21
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=81.58 E-value=1.1 Score=43.73 Aligned_cols=33 Identities=18% Similarity=0.396 Sum_probs=27.5
Q ss_pred CCceEEEeccCCchhHHHHHHHHHhhcCcEeee
Q 011017 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVSF 494 (495)
Q Consensus 462 ~~~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~~ 494 (495)
.-|.|++||+++..=+|++||..|+++|.+|++
T Consensus 29 ~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~ 61 (296)
T 3k31_A 29 EGKKGVIIGVANDKSLAWGIAKAVCAQGAEVAL 61 (296)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEE
T ss_pred CCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEE
Confidence 346799999983126999999999999999975
No 22
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=78.73 E-value=1.6 Score=42.45 Aligned_cols=30 Identities=17% Similarity=0.160 Sum_probs=26.7
Q ss_pred CceEEEeccCCchhHHHHHHHHHhhcCcEeee
Q 011017 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVSF 494 (495)
Q Consensus 463 ~~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~~ 494 (495)
-|.|++||++ +-+|+|+|..|+++|.+|.+
T Consensus 119 gk~vlVtGaa--GGiG~aia~~L~~~G~~V~i 148 (287)
T 1lu9_A 119 GKKAVVLAGT--GPVGMRSAALLAGEGAEVVL 148 (287)
T ss_dssp TCEEEEETCS--SHHHHHHHHHHHHTTCEEEE
T ss_pred CCEEEEECCC--cHHHHHHHHHHHHCcCEEEE
Confidence 3789999987 58999999999999999865
No 23
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=77.85 E-value=1.7 Score=43.26 Aligned_cols=29 Identities=21% Similarity=0.374 Sum_probs=26.4
Q ss_pred ceEEEeccCCchhHHHHHHHHHhhcC-cEeee
Q 011017 464 AHVLLRGTVTANKVANAVASSLCQMG-IKVSF 494 (495)
Q Consensus 464 ~~v~l~g~~~~~k~~~a~a~~lc~~~-~~v~~ 494 (495)
+.|++||++ +-+|++++..|.++| .+|..
T Consensus 33 ~~ilVtGat--G~iG~~l~~~L~~~g~~~V~~ 62 (377)
T 2q1s_A 33 TNVMVVGGA--GFVGSNLVKRLLELGVNQVHV 62 (377)
T ss_dssp CEEEEETTT--SHHHHHHHHHHHHTTCSEEEE
T ss_pred CEEEEECCc--cHHHHHHHHHHHHcCCceEEE
Confidence 579999999 699999999999999 88864
No 24
>3nzo_A UDP-N-acetylglucosamine 4,6-dehydratase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, NAD; HET: MSE NAD; 2.10A {Vibrio fischeri} PDB: 3pvz_A*
Probab=77.50 E-value=1.7 Score=44.22 Aligned_cols=30 Identities=17% Similarity=0.309 Sum_probs=26.4
Q ss_pred CceEEEeccCCchhHHHHHHHHHhhcC-cEeee
Q 011017 463 TAHVLLRGTVTANKVANAVASSLCQMG-IKVSF 494 (495)
Q Consensus 463 ~~~v~l~g~~~~~k~~~a~a~~lc~~~-~~v~~ 494 (495)
-+.|++||++ +-+|+++|..|+++| .+|.+
T Consensus 35 ~k~vLVTGat--G~IG~~l~~~L~~~g~~~V~~ 65 (399)
T 3nzo_A 35 QSRFLVLGGA--GSIGQAVTKEIFKRNPQKLHV 65 (399)
T ss_dssp TCEEEEETTT--SHHHHHHHHHHHTTCCSEEEE
T ss_pred CCEEEEEcCC--hHHHHHHHHHHHHCCCCEEEE
Confidence 3679999999 699999999999999 67764
No 25
>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*
Probab=77.31 E-value=1.5 Score=43.15 Aligned_cols=29 Identities=10% Similarity=0.303 Sum_probs=25.3
Q ss_pred ceEEEeccCCchhHHHHHHHHHhhcC-cEeee
Q 011017 464 AHVLLRGTVTANKVANAVASSLCQMG-IKVSF 494 (495)
Q Consensus 464 ~~v~l~g~~~~~k~~~a~a~~lc~~~-~~v~~ 494 (495)
+.|++||++ +-+|+++|..|.++| .+|..
T Consensus 47 ~~vlVtGat--G~iG~~l~~~L~~~g~~~V~~ 76 (357)
T 2x6t_A 47 RMIIVTGGA--GFIGSNIVKALNDKGITDILV 76 (357)
T ss_dssp -CEEEETTT--SHHHHHHHHHHHHTTCCCEEE
T ss_pred CEEEEECCC--cHHHHHHHHHHHHCCCcEEEE
Confidence 579999999 699999999999999 77754
No 26
>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}
Probab=76.83 E-value=1.6 Score=44.38 Aligned_cols=31 Identities=13% Similarity=0.178 Sum_probs=27.5
Q ss_pred CCceEEEeccCCchhHHHHHHHHHhhcCcEeee
Q 011017 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVSF 494 (495)
Q Consensus 462 ~~~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~~ 494 (495)
.-+.|++||++ +-+|+++|..|.++|.+|..
T Consensus 68 ~~~~vlVTGat--G~iG~~l~~~L~~~g~~V~~ 98 (427)
T 4f6c_A 68 PLGNTLLTGAT--GFLGAYLIEALQGYSHRIYC 98 (427)
T ss_dssp CCEEEEEECTT--SHHHHHHHHHHTTTEEEEEE
T ss_pred CCCEEEEecCC--cHHHHHHHHHHHcCCCEEEE
Confidence 45689999999 69999999999999999864
No 27
>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*
Probab=75.89 E-value=2.3 Score=44.42 Aligned_cols=33 Identities=15% Similarity=0.058 Sum_probs=29.6
Q ss_pred CCCCceEEEeccCCchhHHHHHHHHHhh-cCcEeee
Q 011017 460 PKTTAHVLLRGTVTANKVANAVASSLCQ-MGIKVSF 494 (495)
Q Consensus 460 p~~~~~v~l~g~~~~~k~~~a~a~~lc~-~~~~v~~ 494 (495)
.++-|-++.||++ +=+|+|||..|++ .|.+|++
T Consensus 44 ~~~gKvaLVTGas--~GIG~AiA~~LA~g~GA~Vv~ 77 (405)
T 3zu3_A 44 ANGPKRVLVIGAS--TGYGLAARITAAFGCGADTLG 77 (405)
T ss_dssp TTCCSEEEEESCS--SHHHHHHHHHHHHHHCCEEEE
T ss_pred CCCCCEEEEeCcc--hHHHHHHHHHHHHhcCCEEEE
Confidence 4678899999999 5899999999999 9999975
No 28
>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}
Probab=75.45 E-value=2.4 Score=44.47 Aligned_cols=32 Identities=16% Similarity=0.072 Sum_probs=28.4
Q ss_pred CCCceEEEeccCCchhHHHHHHHHHhh-cCcEeee
Q 011017 461 KTTAHVLLRGTVTANKVANAVASSLCQ-MGIKVSF 494 (495)
Q Consensus 461 ~~~~~v~l~g~~~~~k~~~a~a~~lc~-~~~~v~~ 494 (495)
++-|-|+.||++ +=+|+|+|..|++ +|.+|++
T Consensus 59 ~~gKvaLVTGAS--sGIG~AiA~~LA~~~GA~Vv~ 91 (422)
T 3s8m_A 59 DGPKKVLVIGAS--SGYGLASRITAAFGFGADTLG 91 (422)
T ss_dssp SSCSEEEEESCS--SHHHHHHHHHHHHHHCCEEEE
T ss_pred cCCCEEEEECCC--hHHHHHHHHHHHHhCCCEEEE
Confidence 456789999999 5899999999999 9999975
No 29
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=75.28 E-value=2.1 Score=45.09 Aligned_cols=29 Identities=24% Similarity=0.240 Sum_probs=26.6
Q ss_pred ceEEEeccCCchhHHHHHHHHHhhcCcEeee
Q 011017 464 AHVLLRGTVTANKVANAVASSLCQMGIKVSF 494 (495)
Q Consensus 464 ~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~~ 494 (495)
+.|++||++ +-||++++..|.++|.+|..
T Consensus 148 m~VLVTGat--G~IG~~l~~~L~~~G~~V~~ 176 (516)
T 3oh8_A 148 LTVAITGSR--GLVGRALTAQLQTGGHEVIQ 176 (516)
T ss_dssp CEEEEESTT--SHHHHHHHHHHHHTTCEEEE
T ss_pred CEEEEECCC--CHHHHHHHHHHHHCCCEEEE
Confidence 579999999 69999999999999999874
No 30
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=73.09 E-value=2 Score=41.69 Aligned_cols=30 Identities=20% Similarity=0.266 Sum_probs=26.3
Q ss_pred CceEEEeccCCchhHHHHHHHHHhhcCc---Eeee
Q 011017 463 TAHVLLRGTVTANKVANAVASSLCQMGI---KVSF 494 (495)
Q Consensus 463 ~~~v~l~g~~~~~k~~~a~a~~lc~~~~---~v~~ 494 (495)
-|.|++||++ +=+|+++|..|+++|. +|++
T Consensus 33 ~k~~lVTGas--~GIG~aia~~l~~~G~~~~~V~~ 65 (287)
T 3rku_A 33 KKTVLITGAS--AGIGKATALEYLEASNGDMKLIL 65 (287)
T ss_dssp TCEEEEESTT--SHHHHHHHHHHHHHHTTCSEEEE
T ss_pred CCEEEEecCC--ChHHHHHHHHHHHcCCCCceEEE
Confidence 3679999999 6899999999999987 8765
No 31
>3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A*
Probab=72.62 E-value=3.6 Score=43.05 Aligned_cols=49 Identities=12% Similarity=0.190 Sum_probs=38.5
Q ss_pred cceEEecCCchhhHhhhhcCCCCCceEEEeccCCchhHHHHHHHHHhhcCcEeee
Q 011017 440 LKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVSF 494 (495)
Q Consensus 440 l~~~vv~g~~l~~a~v~~~ip~~~~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~~ 494 (495)
=-+.||.|+.=+++.+++ | +++.|.+||.+ ++|+.|+....++..+|++
T Consensus 187 gvv~vv~g~~~~~~~L~~--~-~vd~V~fTGS~---~~G~~i~~~aa~~l~pv~l 235 (457)
T 3lns_A 187 EYVAVIQGGRDENSHLLS--L-PFDFIFFTGSP---NVGKVVMQAAAKHLTPVVL 235 (457)
T ss_dssp TTEEECCCCHHHHHHHTT--S-CCSEEEEESCH---HHHHHHHHHHHTTTCCEEE
T ss_pred hhEEEecCCHHHHHHHhc--C-CCCEEEEECCH---HHHHHHHHHHhhccCceEE
Confidence 346788885544445554 5 79999999998 9999999999888888865
No 32
>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}
Probab=71.70 E-value=1.9 Score=44.85 Aligned_cols=31 Identities=16% Similarity=0.146 Sum_probs=27.6
Q ss_pred CCceEEEeccCCchhHHHHHHHHHhhc---CcEeee
Q 011017 462 TTAHVLLRGTVTANKVANAVASSLCQM---GIKVSF 494 (495)
Q Consensus 462 ~~~~v~l~g~~~~~k~~~a~a~~lc~~---~~~v~~ 494 (495)
.-+.|++||++ +-+|++++..|.++ |.+|..
T Consensus 72 ~~~~VLVTGat--G~IG~~l~~~Ll~~~~~g~~V~~ 105 (478)
T 4dqv_A 72 ELRTVLLTGAT--GFLGRYLVLELLRRLDVDGRLIC 105 (478)
T ss_dssp CCCEEEEECTT--SHHHHHHHHHHHHHSCTTCEEEE
T ss_pred CCCEEEEECCC--cHHHHHHHHHHHhcCCCCCEEEE
Confidence 45789999999 68999999999999 888874
No 33
>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A
Probab=70.58 E-value=3 Score=43.60 Aligned_cols=31 Identities=13% Similarity=0.239 Sum_probs=27.7
Q ss_pred CCceEEEeccCCchhHHHHHHHHHhhcCcEeee
Q 011017 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVSF 494 (495)
Q Consensus 462 ~~~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~~ 494 (495)
.-|-+++||++ +-+|++||..|+++|.+|++
T Consensus 212 ~gk~~LVTGgs--gGIG~aiA~~La~~Ga~Vvl 242 (454)
T 3u0b_A 212 DGKVAVVTGAA--RGIGATIAEVFARDGATVVA 242 (454)
T ss_dssp TTCEEEESSCS--SHHHHHHHHHHHHTTCEEEE
T ss_pred CCCEEEEeCCc--hHHHHHHHHHHHHCCCEEEE
Confidence 34679999999 68999999999999999975
No 34
>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*
Probab=69.32 E-value=3.6 Score=42.97 Aligned_cols=32 Identities=13% Similarity=0.096 Sum_probs=28.1
Q ss_pred CCCceEEEeccCCchhHHHH--HHHHHhhcCcEeee
Q 011017 461 KTTAHVLLRGTVTANKVANA--VASSLCQMGIKVSF 494 (495)
Q Consensus 461 ~~~~~v~l~g~~~~~k~~~a--~a~~lc~~~~~v~~ 494 (495)
.+-|-|+.||++ +=+|+| ||++|.++|.+|++
T Consensus 58 ~~gK~aLVTGas--sGIG~A~aia~ala~~Ga~Vi~ 91 (418)
T 4eue_A 58 RGPKKVLIVGAS--SGFGLATRISVAFGGPEAHTIG 91 (418)
T ss_dssp CCCSEEEEESCS--SHHHHHHHHHHHHSSSCCEEEE
T ss_pred CCCCEEEEECCC--cHHHHHHHHHHHHHhCCCEEEE
Confidence 456789999999 589999 99999999999964
No 35
>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}
Probab=68.01 E-value=3.6 Score=44.72 Aligned_cols=30 Identities=23% Similarity=0.297 Sum_probs=27.2
Q ss_pred CceEEEeccCCchhHHHHHHHHHhhcCcEeee
Q 011017 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVSF 494 (495)
Q Consensus 463 ~~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~~ 494 (495)
-|-++.||++ +=+|+|+|+.|.++|.+|++
T Consensus 322 gkvalVTGas--~GIG~a~A~~la~~Ga~Vv~ 351 (604)
T 2et6_A 322 DKVVLITGAG--AGLGKEYAKWFAKYGAKVVV 351 (604)
T ss_dssp TCEEEESSCS--SHHHHHHHHHHHHTTCEEEE
T ss_pred CCeEEEECcc--hHHHHHHHHHHHHCCCEEEE
Confidence 3679999999 58999999999999999976
No 36
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=67.29 E-value=3.7 Score=39.92 Aligned_cols=29 Identities=21% Similarity=0.283 Sum_probs=25.8
Q ss_pred CCceEEEeccCCchhHHHHHHHHHhhcCcEeee
Q 011017 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVSF 494 (495)
Q Consensus 462 ~~~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~~ 494 (495)
.-+.|+++|+. -+|+|+|.+|+++| +|.+
T Consensus 127 ~~k~vlV~GaG---giG~aia~~L~~~G-~V~v 155 (287)
T 1nvt_A 127 KDKNIVIYGAG---GAARAVAFELAKDN-NIII 155 (287)
T ss_dssp CSCEEEEECCS---HHHHHHHHHHTSSS-EEEE
T ss_pred CCCEEEEECch---HHHHHHHHHHHHCC-CEEE
Confidence 45789999986 89999999999999 9976
No 37
>3hu5_A Isochorismatase family protein; structural genomics, protein structure INI NEW YORK structural genomix research consortium, nysgxrc; 1.50A {Desulfovibrio vulgaris}
Probab=67.01 E-value=23 Score=32.71 Aligned_cols=32 Identities=16% Similarity=0.171 Sum_probs=28.0
Q ss_pred CCceEEEeccCCchhHHHHHHHHHhhcCcEeee
Q 011017 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVSF 494 (495)
Q Consensus 462 ~~~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~~ 494 (495)
+.++|+++|-.+ +=-=.+.|+.+.++|.+|.+
T Consensus 125 gi~~lvi~G~~T-~~CV~~Ta~da~~~Gy~V~v 156 (204)
T 3hu5_A 125 GVDTLLVSGTQY-PNCIRGTAVDAFALDYDVVV 156 (204)
T ss_dssp TCCEEEEEEECT-TTHHHHHHHHHHHTTCEEEE
T ss_pred CCCeEEEeeecc-chHHHHHHHHHHHCCCEEEE
Confidence 899999999987 55558889999999999986
No 38
>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}
Probab=64.46 E-value=3.2 Score=43.28 Aligned_cols=31 Identities=13% Similarity=0.178 Sum_probs=27.4
Q ss_pred CCceEEEeccCCchhHHHHHHHHHhhcCcEeee
Q 011017 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVSF 494 (495)
Q Consensus 462 ~~~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~~ 494 (495)
+.+.|++||++ +-||++++..|.++|.+|..
T Consensus 149 ~~~~VLVTGat--G~iG~~l~~~L~~~g~~V~~ 179 (508)
T 4f6l_B 149 PLGNTLLTGAT--GFLGAYLIEALQGYSHRIYC 179 (508)
T ss_dssp CCEEEEESCTT--SHHHHHHHHHTBTTEEEEEE
T ss_pred CCCeEEEECCc--cchHHHHHHHHHhcCCEEEE
Confidence 34789999999 69999999999999999864
No 39
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=63.03 E-value=5.9 Score=39.72 Aligned_cols=33 Identities=15% Similarity=0.172 Sum_probs=27.4
Q ss_pred CCCCCceEEEeccCCchhHHHHHHHHHhhcCc-Eeee
Q 011017 459 LPKTTAHVLLRGTVTANKVANAVASSLCQMGI-KVSF 494 (495)
Q Consensus 459 ip~~~~~v~l~g~~~~~k~~~a~a~~lc~~~~-~v~~ 494 (495)
+.-.-|.|+++|+. -+|||||.+|+++|+ +|.+
T Consensus 150 ~~l~gk~~lVlGaG---G~g~aia~~L~~~Ga~~V~i 183 (315)
T 3tnl_A 150 HDIIGKKMTICGAG---GAATAICIQAALDGVKEISI 183 (315)
T ss_dssp CCCTTSEEEEECCS---HHHHHHHHHHHHTTCSEEEE
T ss_pred CCccCCEEEEECCC---hHHHHHHHHHHHCCCCEEEE
Confidence 33345789999985 789999999999999 7765
No 40
>3jx9_A Putative phosphoheptose isomerase; YP_001815198.1, structura genomics, joint center for structural genomics, JCSG; HET: MSE; 1.95A {Exiguobacterium sibiricum 255-15}
Probab=62.63 E-value=5.9 Score=36.47 Aligned_cols=73 Identities=14% Similarity=-0.014 Sum_probs=47.8
Q ss_pred eccchhhhhhHHHHHHHHHHHHhcCCeEEEeccccccccccccceeeeccCC------CCcceEEecCCchhhHhhhhcC
Q 011017 386 YNLPWRREAINSLIEEAILEADAKGVKVISLGLLNQGEELNRNGEIYLERQP------NKLKIKVVDGSSLAAAVVVNSL 459 (495)
Q Consensus 386 y~~~~~~~~in~~ie~ai~~a~~~g~kv~sl~~ln~~~~ln~~g~~~~~~~p------~~l~~~vv~g~~l~~a~v~~~i 459 (495)
=++=....+.|..+-+..++|+++|++|+++-.+-..++.-..=.-++++-| .+-. |+.-.+|+|++.|+|.|
T Consensus 80 ~vii~S~Sg~n~~~ie~A~~ake~G~~vIaITs~~~~~~~~~~L~d~an~~p~gll~~e~g~-r~g~~Sti~~~~i~~~i 158 (170)
T 3jx9_A 80 RVLIFTPDTERSDLLASLARYDAWHTPYSIITLGDVTETLERSIAPLALKFDKGLLPAEDGS-RHGLPSLALGAFLLTHI 158 (170)
T ss_dssp EEEEEESCSCCHHHHHHHHHHHHHTCCEEEEESSCCCTTGGGSSSCEECCCCSCSEECTTSC-EECCCHHHHHHHHHHHH
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHCCCcEEEEeCcchhccccCcHHHHHhCCCCCceECCCCC-EechhHHHHHHHHHHHH
Confidence 3344455668998999999999999999999885444442000011222222 1333 88888888888888876
No 41
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=61.94 E-value=11 Score=37.59 Aligned_cols=75 Identities=17% Similarity=0.168 Sum_probs=52.4
Q ss_pred HhcCCeEEEeccccccccccccceeeeccCCCCcceEEecCCchhh-------HhhhhcC-CCCCceEEEeccCCchhHH
Q 011017 407 DAKGVKVISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAA-------AVVVNSL-PKTTAHVLLRGTVTANKVA 478 (495)
Q Consensus 407 ~~~g~kv~sl~~ln~~~~ln~~g~~~~~~~p~~l~~~vv~g~~l~~-------a~v~~~i-p~~~~~v~l~g~~~~~k~~ 478 (495)
+-.|+|+++-.- + |..|.+.+.---...-.=++||+.||+ |+-...+ +++.+.|.+.|+. ..|
T Consensus 63 ~~~g~K~~~~~p---~---n~~~~v~L~d~~tG~p~a~ld~~~lT~~RTaA~s~laa~~La~~~~~~v~iIGaG---~~a 133 (313)
T 3hdj_A 63 GVAGAKVYTTIK---G---QFQFVILLFSAADGRPLATCDAGTLTRKRTAACTVLAAGALARPRSSVLGLFGAG---TQG 133 (313)
T ss_dssp TEEEEEEEEEET---T---EEEEEEEEEETTTCCEEEEECSHHHHHHHHHHHHHHHHHHHSCTTCCEEEEECCS---HHH
T ss_pred CeeEEEEeecCC---C---CceEEEEEEECCCCCEEEEEcCchhhhHHHHHHHHHHHHhhccCCCcEEEEECcc---HHH
Confidence 346999988642 1 445655554322356677999999975 2223333 7889999999987 899
Q ss_pred HHHHHHHhh-cCc
Q 011017 479 NAVASSLCQ-MGI 490 (495)
Q Consensus 479 ~a~a~~lc~-~~~ 490 (495)
++.+.+|++ +++
T Consensus 134 ~~~~~al~~~~~~ 146 (313)
T 3hdj_A 134 AEHAAQLSARFAL 146 (313)
T ss_dssp HHHHHHHHHHSCC
T ss_pred HHHHHHHHHhCCC
Confidence 999999997 444
No 42
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=61.93 E-value=6.4 Score=39.44 Aligned_cols=46 Identities=20% Similarity=0.304 Sum_probs=32.3
Q ss_pred cCCchhhHhhhhcCCCCCceEEEeccCCchhHHHHHHHHHhhcCc-Eeee
Q 011017 446 DGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGI-KVSF 494 (495)
Q Consensus 446 ~g~~l~~a~v~~~ip~~~~~v~l~g~~~~~k~~~a~a~~lc~~~~-~v~~ 494 (495)
||..+..+.--+.+.-.-+.|+++|+. -.|||+|.+|++.|+ +|.+
T Consensus 131 D~~Gf~~~L~~~~~~l~gk~~lVlGAG---Gaaraia~~L~~~G~~~v~v 177 (312)
T 3t4e_A 131 DGTGHIRAIKESGFDMRGKTMVLLGAG---GAATAIGAQAAIEGIKEIKL 177 (312)
T ss_dssp HHHHHHHHHHHTTCCCTTCEEEEECCS---HHHHHHHHHHHHTTCSEEEE
T ss_pred cHHHHHHHHHhcCCCcCCCEEEEECcC---HHHHHHHHHHHHcCCCEEEE
Confidence 344444443222344455789999986 789999999999999 6765
No 43
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=61.87 E-value=6.5 Score=37.88 Aligned_cols=30 Identities=20% Similarity=0.251 Sum_probs=26.4
Q ss_pred CCceEEEeccCCchhHHHHHHHHHhhcCcEeee
Q 011017 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVSF 494 (495)
Q Consensus 462 ~~~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~~ 494 (495)
.-+.|+++|+. -+|+++|.+|+++|.+|.+
T Consensus 118 ~~k~vlViGaG---g~g~a~a~~L~~~G~~V~v 147 (271)
T 1nyt_A 118 PGLRILLIGAG---GASRGVLLPLLSLDCAVTI 147 (271)
T ss_dssp TTCEEEEECCS---HHHHHHHHHHHHTTCEEEE
T ss_pred CCCEEEEECCc---HHHHHHHHHHHHcCCEEEE
Confidence 44789999985 7999999999999998875
No 44
>1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A*
Probab=61.82 E-value=8.9 Score=40.69 Aligned_cols=52 Identities=19% Similarity=0.256 Sum_probs=39.1
Q ss_pred CCCcceEEecCCchhhHhhhhcCCCCCceEEEeccCCchhHHHHHHHHHhhcCcEeee
Q 011017 437 PNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVSF 494 (495)
Q Consensus 437 p~~l~~~vv~g~~l~~a~v~~~ip~~~~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~~ 494 (495)
| +=-+.||+|.. .+..-|-+- ++++.|.+||.+ ++|+.|+....++..+|++
T Consensus 211 P-~gvv~vv~g~~-~~g~~L~~~-p~v~~V~FTGS~---~~G~~i~~~aa~~~~~v~l 262 (503)
T 1a4s_A 211 P-VGLVNVVQGGA-ETGSLLCHH-PNVAKVSFTGSV---PTGKKVMEMSAKTVKHVTL 262 (503)
T ss_dssp C-TTSEEECCCSH-HHHHHHHHC-TTCCEEEEESCH---HHHHHHHHHHHTTTCEEEE
T ss_pred C-cCeEEEEecCc-hHHHHHHhC-CCcCEEEEeCCH---HHHHHHHHHhhhcCCceEE
Confidence 5 44578888865 433323333 479999999998 9999999999998999875
No 45
>4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti}
Probab=61.81 E-value=9.7 Score=40.67 Aligned_cols=51 Identities=20% Similarity=0.223 Sum_probs=38.1
Q ss_pred CcceEEecCCchhhHhhhhcCCCCCceEEEeccCCchhHHHHHHHHHhhcCcEeee
Q 011017 439 KLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVSF 494 (495)
Q Consensus 439 ~l~~~vv~g~~l~~a~v~~~ip~~~~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~~ 494 (495)
+=-+.||.|+.=+++.++. -++++.|.+||++ ++|++|+....++..+|++
T Consensus 219 ~gvv~vv~g~~~~~~~L~~--~p~vd~I~FTGS~---~vG~~i~~~aa~~lkpv~l 269 (521)
T 4e4g_A 219 AGILNVVNGDKGAVDAILT--HPDIAAVSFVGST---PIARYVYGTAAMNGKRAQC 269 (521)
T ss_dssp TTSEEECCCCHHHHHHHHT--CTTCCEEEEESCH---HHHHHHHHHHHHTTCEEEE
T ss_pred cCeEEEEeCChHHHHHHHh--CCCcCEEEEECCH---HHHHHHHHHHhhcCCCeee
Confidence 3347788886433333333 3468999999998 8999999999999999875
No 46
>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1
Probab=61.70 E-value=8.7 Score=41.57 Aligned_cols=30 Identities=20% Similarity=0.190 Sum_probs=26.4
Q ss_pred CceEEEeccCCchhHHHHHHHHHhhc-CcEeee
Q 011017 463 TAHVLLRGTVTANKVANAVASSLCQM-GIKVSF 494 (495)
Q Consensus 463 ~~~v~l~g~~~~~k~~~a~a~~lc~~-~~~v~~ 494 (495)
-+.|++||++ +-+|++++..|.++ |.+|..
T Consensus 315 ~~~VLVTGat--G~IG~~l~~~Ll~~~g~~V~~ 345 (660)
T 1z7e_A 315 RTRVLILGVN--GFIGNHLTERLLREDHYEVYG 345 (660)
T ss_dssp CEEEEEETTT--SHHHHHHHHHHHHSSSEEEEE
T ss_pred CceEEEEcCC--cHHHHHHHHHHHhcCCCEEEE
Confidence 3579999999 69999999999998 888864
No 47
>3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens}
Probab=61.69 E-value=8.9 Score=40.89 Aligned_cols=51 Identities=25% Similarity=0.291 Sum_probs=38.2
Q ss_pred CcceEEecCCchhhHhhhhcCCCCCceEEEeccCCchhHHHHHHHHHhhcCcEeee
Q 011017 439 KLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVSF 494 (495)
Q Consensus 439 ~l~~~vv~g~~l~~a~v~~~ip~~~~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~~ 494 (495)
+=-+.||.|..-+...++. -++++.|++||++ ++|+.|+....++..+|++
T Consensus 207 ~gvv~vv~g~~~~g~~L~~--~p~vd~I~FTGS~---~~G~~i~~~aa~~lk~v~l 257 (517)
T 3r31_A 207 KGLFNVIQGDRDTGPLLVN--HPDVAKVSLTGSV---PTGRKVAAAAAGHLKHVTM 257 (517)
T ss_dssp TTSEEECCCCTTHHHHHHT--CTTEEEEEEESCH---HHHHHHHHHHHHTTCEEEE
T ss_pred cccEEEEECCHHHHHHHHh--CCCcCEEeccCCH---HHHHHHHHHhhcCCCcEEE
Confidence 3346778874434444443 3568999999998 8999999999999888875
No 48
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=60.72 E-value=6.8 Score=38.53 Aligned_cols=33 Identities=15% Similarity=0.195 Sum_probs=27.6
Q ss_pred CCCCCceEEEeccCCchhHHHHHHHHHhhcCc-Eeee
Q 011017 459 LPKTTAHVLLRGTVTANKVANAVASSLCQMGI-KVSF 494 (495)
Q Consensus 459 ip~~~~~v~l~g~~~~~k~~~a~a~~lc~~~~-~v~~ 494 (495)
+.-.-+.|++.|+. .+|+++|.+|+++|+ +|.+
T Consensus 137 ~~l~~~~vlVlGaG---g~g~aia~~L~~~G~~~V~v 170 (297)
T 2egg_A 137 ITLDGKRILVIGAG---GGARGIYFSLLSTAAERIDM 170 (297)
T ss_dssp CCCTTCEEEEECCS---HHHHHHHHHHHTTTCSEEEE
T ss_pred CCCCCCEEEEECcH---HHHHHHHHHHHHCCCCEEEE
Confidence 44345789999986 799999999999998 8865
No 49
>3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus}
Probab=60.46 E-value=9.4 Score=40.34 Aligned_cols=52 Identities=19% Similarity=0.045 Sum_probs=38.9
Q ss_pred CCCcceEEecCCchhhHhhhhcCCCCCceEEEeccCCchhHHHHHHHHHhhcCcEeee
Q 011017 437 PNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVSF 494 (495)
Q Consensus 437 p~~l~~~vv~g~~l~~a~v~~~ip~~~~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~~ 494 (495)
| +=-+.||.|+.-.+.. |-+- ++++.|++||++ ++|+.|+....++..+|++
T Consensus 179 P-~gvv~vv~g~~~~~~~-L~~~-p~vd~I~fTGS~---~~G~~i~~~aa~~lk~v~l 230 (484)
T 3ros_A 179 P-EGSLINLYPSYDQLAD-IIAD-PRIQGVALTGSE---RGGSAVAEAAGKNLKKSTM 230 (484)
T ss_dssp C-TTSEEEECCCHHHHHH-HHTS-TTEEEEEEESCH---HHHHHHHHHHHHTTCEEEE
T ss_pred C-cCeEEEEeCChHHHHH-HHhC-CCcCEEEEECCH---HHHHHHHHHHhccCCceEe
Confidence 5 4447788886544333 3332 468999999998 9999999999999888875
No 50
>4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A*
Probab=60.44 E-value=11 Score=39.92 Aligned_cols=52 Identities=12% Similarity=0.245 Sum_probs=38.4
Q ss_pred CCCcceEEecCCch-hhHhhhhcCCCCCceEEEeccCCchhHHHHHHHHHhhcCcEeee
Q 011017 437 PNKLKIKVVDGSSL-AAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVSF 494 (495)
Q Consensus 437 p~~l~~~vv~g~~l-~~a~v~~~ip~~~~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~~ 494 (495)
| +=-+.||.|+.- +.+.++ +- ++++.|.+||++ ++|+.|+....++..+|.+
T Consensus 216 P-~gv~nvv~g~~~~~g~~L~-~~-p~v~~V~FTGS~---~~G~~i~~~aa~~~k~v~l 268 (498)
T 4f3x_A 216 P-EGVVNVITGRGETVGNALI-NH-PKVGMVSITGDI---ATGKKVLAAAAKTVKRTHL 268 (498)
T ss_dssp C-TTSEEECCCCTTTHHHHHH-TC-TTCCEEEEESCH---HHHHHHHHHHHTTTCEEEE
T ss_pred C-cCeEEEEeCCchHHHHHHH-hC-CCcCEEEEECCH---HHHHHHHHHHHhhCCceee
Confidence 6 445678888543 223333 22 479999999998 9999999999998888875
No 51
>3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} SCOP: c.82.1.1 PDB: 3szb_A* 1ad3_A*
Probab=60.19 E-value=6.4 Score=41.39 Aligned_cols=47 Identities=15% Similarity=0.299 Sum_probs=36.0
Q ss_pred eEEecCCchhhHhhhhcCCCCCceEEEeccCCchhHHHHHHHHHhhcCcEeee
Q 011017 442 IKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVSF 494 (495)
Q Consensus 442 ~~vv~g~~l~~a~v~~~ip~~~~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~~ 494 (495)
+.||.|+.=.+...+.. +++.|++||++ ++|+.|+....++..+|++
T Consensus 179 v~vv~g~~~~~~~ll~~---~vd~I~FTGS~---~vG~~i~~~aa~~lkpv~l 225 (469)
T 3sza_A 179 YPVINGGVPETTELLKE---RFDHILYTGST---GVGKIIMTAAAKHLTPVTL 225 (469)
T ss_dssp SCBCCCSHHHHHHHTTS---CCSEEEEESCH---HHHHHHHHHHHTTTCCEEE
T ss_pred EEEEECCHHHHHHHHhc---CCCEEEEECCH---HHHHHHHHHHhhccCceEE
Confidence 55777754344445543 68999999998 9999999998888888865
No 52
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=60.15 E-value=7.1 Score=38.35 Aligned_cols=30 Identities=33% Similarity=0.396 Sum_probs=26.0
Q ss_pred CCceEEEeccCCchhHHHHHHHHHhhcCc-Eeee
Q 011017 462 TTAHVLLRGTVTANKVANAVASSLCQMGI-KVSF 494 (495)
Q Consensus 462 ~~~~v~l~g~~~~~k~~~a~a~~lc~~~~-~v~~ 494 (495)
.-+.|+++|+. -+|||+|.+|++.|+ +|.+
T Consensus 126 ~~k~vlVlGaG---G~g~aia~~L~~~G~~~v~i 156 (283)
T 3jyo_A 126 KLDSVVQVGAG---GVGNAVAYALVTHGVQKLQV 156 (283)
T ss_dssp CCSEEEEECCS---HHHHHHHHHHHHTTCSEEEE
T ss_pred CCCEEEEECCc---HHHHHHHHHHHHCCCCEEEE
Confidence 45789999996 789999999999999 5765
No 53
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=59.75 E-value=6.1 Score=41.92 Aligned_cols=86 Identities=17% Similarity=0.244 Sum_probs=27.0
Q ss_pred hhhhhHHHHHHHHHHHHhcCCeEEEeccccccccccccceeeeccCCCCcceEEecCCchhhHhhhhcC----------C
Q 011017 391 RREAINSLIEEAILEADAKGVKVISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSL----------P 460 (495)
Q Consensus 391 ~~~~in~~ie~ai~~a~~~g~kv~sl~~ln~~~~ln~~g~~~~~~~p~~l~~~vv~g~~l~~a~v~~~i----------p 460 (495)
...-+++-+.+.-+ -++.|+.|+.+- ++|+.. .| +-..++--|++|....=-+++ +
T Consensus 281 ~s~l~G~~l~el~~-~~~~~~~vi~i~---------r~g~~~---~p-~~~~~l~~GD~L~v~g~~~~l~~~~~~~~~~~ 346 (565)
T 4gx0_A 281 GTPFAGKTIGESGI-RQRTGLSIIGVW---------ERGSLT---TP-QRETVLTEQSLLVLAGTKSQLAALEYLIGEAP 346 (565)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCccCCCCHHHcCc-chhcCCEEEEEE---------ECCEEe---CC-CCCcEeCCCCEEEEEeCHHHHHHHHHHhcCCC
Confidence 34445555555422 234577776542 345554 45 445555567776654322222 2
Q ss_pred CCCceEEEeccCCchhHHHHHHHHHhhcCcEeee
Q 011017 461 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVSF 494 (495)
Q Consensus 461 ~~~~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~~ 494 (495)
+. ++|.+.|.. ++|+.+|..|.++|+.|++
T Consensus 347 ~~-~~viIiG~G---~~G~~la~~L~~~g~~v~v 376 (565)
T 4gx0_A 347 ED-ELIFIIGHG---RIGCAAAAFLDRKPVPFIL 376 (565)
T ss_dssp CC-CCEEEECCS---HHHHHHHHHHHHTTCCEEE
T ss_pred CC-CCEEEECCC---HHHHHHHHHHHHCCCCEEE
Confidence 23 899999997 9999999999999999876
No 54
>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*
Probab=58.76 E-value=8.3 Score=40.94 Aligned_cols=29 Identities=24% Similarity=0.430 Sum_probs=25.5
Q ss_pred ceEEEeccCCchhHHHHHHHHHhhcCc-Eeee
Q 011017 464 AHVLLRGTVTANKVANAVASSLCQMGI-KVSF 494 (495)
Q Consensus 464 ~~v~l~g~~~~~k~~~a~a~~lc~~~~-~v~~ 494 (495)
+.|++||++ +-+|+++|..|.++|. +|++
T Consensus 240 ~~vLITGgs--gGIG~alA~~La~~Ga~~vvl 269 (496)
T 3mje_A 240 GSVLVTGGT--GGIGGRVARRLAEQGAAHLVL 269 (496)
T ss_dssp SEEEEETCS--SHHHHHHHHHHHHTTCSEEEE
T ss_pred CEEEEECCC--CchHHHHHHHHHHCCCcEEEE
Confidence 679999999 6899999999999999 5543
No 55
>1j2r_A Hypothetical isochorismatase family protein YECD; parallel beta-sheet 3-2-1-4-5-6, alpha-beta-alpha motif, TET structural genomics; 1.30A {Escherichia coli} SCOP: c.33.1.3
Probab=58.62 E-value=67 Score=29.07 Aligned_cols=37 Identities=16% Similarity=0.282 Sum_probs=30.6
Q ss_pred hhhcCCCCCceEEEeccCCchhHHHHHHHHHhhcCcEeee
Q 011017 455 VVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVSF 494 (495)
Q Consensus 455 v~~~ip~~~~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~~ 494 (495)
.|++ .|.++|+++|-.+ +=--.+.|+.+.++|.+|.+
T Consensus 126 ~L~~--~gi~~lvi~G~~T-~~CV~~Ta~da~~~Gy~v~v 162 (199)
T 1j2r_A 126 QLRR--RGIDTIVLCGIST-NIGVESTARNAWELGFNLVI 162 (199)
T ss_dssp HHHH--TTCCEEEEEEECT-TTHHHHHHHHHHHTTCEEEE
T ss_pred HHHH--CCCCEEEEEeeec-cHHHHHHHHHHHHCCCEEEE
Confidence 4444 4899999999987 55568899999999999986
No 56
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=58.26 E-value=8.2 Score=37.90 Aligned_cols=32 Identities=22% Similarity=0.187 Sum_probs=26.7
Q ss_pred CCCCceEEEeccCCchhHHHHHHHHHhhcCc-Eeee
Q 011017 460 PKTTAHVLLRGTVTANKVANAVASSLCQMGI-KVSF 494 (495)
Q Consensus 460 p~~~~~v~l~g~~~~~k~~~a~a~~lc~~~~-~v~~ 494 (495)
.-.-+.|+++|+. -.|||+|.+|+++|+ +|.+
T Consensus 123 ~l~~k~vlvlGaG---g~g~aia~~L~~~G~~~v~v 155 (281)
T 3o8q_A 123 LLKGATILLIGAG---GAARGVLKPLLDQQPASITV 155 (281)
T ss_dssp CCTTCEEEEECCS---HHHHHHHHHHHTTCCSEEEE
T ss_pred CccCCEEEEECch---HHHHHHHHHHHhcCCCeEEE
Confidence 3355789999986 799999999999997 7765
No 57
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=58.21 E-value=6 Score=38.22 Aligned_cols=30 Identities=23% Similarity=0.293 Sum_probs=26.3
Q ss_pred CCceEEEeccCCchhHHHHHHHHHhhcCcEeee
Q 011017 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVSF 494 (495)
Q Consensus 462 ~~~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~~ 494 (495)
.-+.|+++|+. .+|+|+|.+|+++|.+|.+
T Consensus 118 ~~~~vlvlGaG---g~g~a~a~~L~~~G~~v~v 147 (272)
T 1p77_A 118 PNQHVLILGAG---GATKGVLLPLLQAQQNIVL 147 (272)
T ss_dssp TTCEEEEECCS---HHHHTTHHHHHHTTCEEEE
T ss_pred CCCEEEEECCc---HHHHHHHHHHHHCCCEEEE
Confidence 45789999985 7999999999999988875
No 58
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=58.03 E-value=7.7 Score=37.91 Aligned_cols=30 Identities=20% Similarity=0.224 Sum_probs=26.0
Q ss_pred CCceEEEeccCCchhHHHHHHHHHhhcCc-Eeee
Q 011017 462 TTAHVLLRGTVTANKVANAVASSLCQMGI-KVSF 494 (495)
Q Consensus 462 ~~~~v~l~g~~~~~k~~~a~a~~lc~~~~-~v~~ 494 (495)
.-|.|+++|+. -.|||+|.+|++.|+ +|.+
T Consensus 119 ~~k~~lvlGaG---g~~~aia~~L~~~G~~~v~i 149 (272)
T 3pwz_A 119 RNRRVLLLGAG---GAVRGALLPFLQAGPSELVI 149 (272)
T ss_dssp TTSEEEEECCS---HHHHHHHHHHHHTCCSEEEE
T ss_pred cCCEEEEECcc---HHHHHHHHHHHHcCCCEEEE
Confidence 45789999986 789999999999997 7764
No 59
>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*
Probab=57.63 E-value=6.1 Score=41.59 Aligned_cols=31 Identities=26% Similarity=0.366 Sum_probs=26.6
Q ss_pred CCceEEEeccCCchhHHHHHHHHHhhcCcE-eee
Q 011017 462 TTAHVLLRGTVTANKVANAVASSLCQMGIK-VSF 494 (495)
Q Consensus 462 ~~~~v~l~g~~~~~k~~~a~a~~lc~~~~~-v~~ 494 (495)
.-+.|++||++ +-+|+++|..|.++|.+ |++
T Consensus 225 ~~~~vLITGgt--GgIG~~la~~La~~G~~~vvl 256 (486)
T 2fr1_A 225 PTGTVLVTGGT--GGVGGQIARWLARRGAPHLLL 256 (486)
T ss_dssp CCSEEEEETTT--SHHHHHHHHHHHHHTCSEEEE
T ss_pred CCCEEEEECCC--CHHHHHHHHHHHHcCCCEEEE
Confidence 34679999999 69999999999999996 553
No 60
>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}
Probab=57.10 E-value=7.9 Score=41.15 Aligned_cols=31 Identities=19% Similarity=0.411 Sum_probs=26.5
Q ss_pred CCceEEEeccCCchhHHHHHHHHHhhcCcE-eee
Q 011017 462 TTAHVLLRGTVTANKVANAVASSLCQMGIK-VSF 494 (495)
Q Consensus 462 ~~~~v~l~g~~~~~k~~~a~a~~lc~~~~~-v~~ 494 (495)
.-+.|++||++ +-+|+++|..|.++|.+ |++
T Consensus 258 ~~~~vLITGgt--GgIG~~lA~~La~~G~~~vvl 289 (511)
T 2z5l_A 258 PSGTVLITGGM--GAIGRRLARRLAAEGAERLVL 289 (511)
T ss_dssp CCSEEEEETTT--SHHHHHHHHHHHHTTCSEEEE
T ss_pred CCCEEEEECCC--CHHHHHHHHHHHhCCCcEEEE
Confidence 34679999999 69999999999999994 543
No 61
>3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae}
Probab=56.89 E-value=13 Score=39.35 Aligned_cols=52 Identities=8% Similarity=0.221 Sum_probs=38.2
Q ss_pred CCCcceEEecCCch-hhHhhhhcCCCCCceEEEeccCCchhHHHHHHHHHhhcCcEeee
Q 011017 437 PNKLKIKVVDGSSL-AAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVSF 494 (495)
Q Consensus 437 p~~l~~~vv~g~~l-~~a~v~~~ip~~~~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~~ 494 (495)
| +=-+.||.|+.- +...++. -++++.|.+||++ ++|+.|+....++..+|.+
T Consensus 217 P-~gvvnvv~g~~~~~g~~L~~--hp~v~~I~FTGS~---~~G~~i~~~aa~~~k~v~l 269 (497)
T 3i44_A 217 P-SGVFNLINGDGANVGSYLSA--HPDLEMISFTGST---RAGKDISKNASNTLKRVCL 269 (497)
T ss_dssp C-TTSEEECCCCTTTHHHHHHH--CTTCCEEEEESCH---HHHHHHHHHHHTTTCEEEE
T ss_pred C-CCeEEEEeCCChHHHHHHHh--CCCcCEEEEeCcH---HHHHHHHHHHhhcCCceee
Confidence 5 445777887542 2222332 2479999999998 9999999999988888875
No 62
>1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A
Probab=56.82 E-value=12 Score=39.60 Aligned_cols=51 Identities=10% Similarity=0.112 Sum_probs=37.7
Q ss_pred CcceEEecCCc-hhhHhhhhcCCCCCceEEEeccCCchhHHHHHHHHHhhcCcEeee
Q 011017 439 KLKIKVVDGSS-LAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVSF 494 (495)
Q Consensus 439 ~l~~~vv~g~~-l~~a~v~~~ip~~~~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~~ 494 (495)
+=-+.||.|+. -+.+.+++ -++++.|.+||.+ ++|++|+....++..+|++
T Consensus 215 ~gvv~vv~g~~~~~g~~L~~--~p~vd~I~FTGS~---~~G~~i~~~aa~~l~~v~l 266 (495)
T 1wnd_A 215 AGVVNILFGRGKTVGDPLTG--HPKVRMVSLTGSI---ATGEHIISHTASSIKRTHM 266 (495)
T ss_dssp TTSEEECCCCTTTTHHHHHT--CTTEEEEEEESCH---HHHHHHHHHHGGGTCEEEE
T ss_pred cCeEEEEeCCCHHHHHHHHh--CCCcCEEEEECcH---HHHHHHHHHHHhcCCcccc
Confidence 44467787743 23333443 3579999999998 8999999999988898875
No 63
>1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis}
Probab=56.26 E-value=12 Score=39.54 Aligned_cols=51 Identities=16% Similarity=0.056 Sum_probs=37.4
Q ss_pred CcceEEecCCchhhHhhhhcCCCCCceEEEeccCCchhHHHHHHHHHhhcCcEeee
Q 011017 439 KLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVSF 494 (495)
Q Consensus 439 ~l~~~vv~g~~l~~a~v~~~ip~~~~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~~ 494 (495)
+=-+.||.|+.=+.+.++. -++++.|.+||.+ ++|++|+....++..+|++
T Consensus 198 ~gvv~vv~g~~~~~~~L~~--~~~v~~I~fTGS~---~~g~~i~~~aa~~~~pv~l 248 (486)
T 1t90_A 198 KGVFNVVYGAHDVVNGILE--HPEIKAISFVGSK---PVGEYVYKKGSENLKRVQS 248 (486)
T ss_dssp TTSEEECCCSHHHHHHHHH--CTTEEEEEEESCH---HHHHHHHHHHHHTTCEEEE
T ss_pred CCEEEEEECCHHHHHHHHh--CCCCCEEEEeCCH---HHHHHHHHHHhccCCcEEe
Confidence 3346788885423333333 3478999999998 8999999998888888875
No 64
>2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus}
Probab=56.03 E-value=14 Score=39.25 Aligned_cols=51 Identities=20% Similarity=0.206 Sum_probs=37.9
Q ss_pred CCCcceEEecCCc--hhhHhhhhcCCCCCceEEEeccCCchhHHHHHHHHHhhcCcEeee
Q 011017 437 PNKLKIKVVDGSS--LAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVSF 494 (495)
Q Consensus 437 p~~l~~~vv~g~~--l~~a~v~~~ip~~~~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~~ 494 (495)
| +=-+.||.|+. ...+.+-+ ++++.|.+||.+ ++|++|+....++..+|++
T Consensus 218 P-~gvv~vv~g~~~~~g~~L~~~---p~vd~I~FTGS~---~~G~~I~~~aa~~l~~v~l 270 (515)
T 2d4e_A 218 P-PGVFNLVQGFGEEAGAALVAH---PLVPLLTLTGET---ETGKIVMRNAADHLKRLSP 270 (515)
T ss_dssp C-TTSEEECCCCTTTHHHHHHHC---TTCCEEEEESCH---HHHHHHHHHHGGGTCEEEE
T ss_pred C-cCeEEEEeCCchHHHHHHHhC---CCcCEEEEeCcH---HHHHHHHHHHhhcCCceEe
Confidence 5 44477888853 33333322 478999999998 8999999999998999875
No 65
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=55.10 E-value=9 Score=37.78 Aligned_cols=34 Identities=15% Similarity=0.038 Sum_probs=28.1
Q ss_pred cCCCCCceEEEeccCCchhHHHHHHHHHhhcCc-Eeee
Q 011017 458 SLPKTTAHVLLRGTVTANKVANAVASSLCQMGI-KVSF 494 (495)
Q Consensus 458 ~ip~~~~~v~l~g~~~~~k~~~a~a~~lc~~~~-~v~~ 494 (495)
.++-.-+.|++.|+. -.|||+|.+|++.|+ +|.+
T Consensus 117 ~~~~~~k~vlvlGaG---Gaaraia~~L~~~G~~~v~v 151 (282)
T 3fbt_A 117 RVEIKNNICVVLGSG---GAARAVLQYLKDNFAKDIYV 151 (282)
T ss_dssp TCCCTTSEEEEECSS---TTHHHHHHHHHHTTCSEEEE
T ss_pred CCCccCCEEEEECCc---HHHHHHHHHHHHcCCCEEEE
Confidence 444456799999997 679999999999999 7765
No 66
>3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} SCOP: c.82.1.0 PDB: 3iwk_A* 4a0m_A*
Probab=54.81 E-value=13 Score=39.41 Aligned_cols=52 Identities=13% Similarity=0.191 Sum_probs=36.7
Q ss_pred CcceEEecCCchhhHhhhhcCCCCCceEEEeccCCchhHHHHHHHHHhhcCcEeee
Q 011017 439 KLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVSF 494 (495)
Q Consensus 439 ~l~~~vv~g~~l~~a~v~~~ip~~~~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~~ 494 (495)
+=-+.||.|+.-.+..-|-+- ++++.|++||++ ++|+.|+....++..+|++
T Consensus 208 ~gvv~vv~g~~~~~g~~L~~~-~~v~~I~FTGS~---~~G~~i~~~aa~~l~~v~l 259 (503)
T 3iwj_A 208 PGVLNILTGLGPEAGAPLATH-PDVDKVAFTGSS---ATGSKIMTAAAQLVKPVSL 259 (503)
T ss_dssp TTSEEECCSCHHHHTHHHHTC-TTCCEEEEESCH---HHHHHHHHHHGGGTCCEEE
T ss_pred cCeEEEEeCCcHHHHHHHhhC-CCccEEEEECcH---HHHHHHHHHHhcCCCCEEE
Confidence 334677888643222222222 369999999998 8999999998888888864
No 67
>3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis}
Probab=54.70 E-value=12 Score=39.62 Aligned_cols=51 Identities=14% Similarity=0.154 Sum_probs=37.6
Q ss_pred CcceEEecCCchhhHhhhhcCCCCCceEEEeccCCchhHHHHHHHHHhhcCcEeee
Q 011017 439 KLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVSF 494 (495)
Q Consensus 439 ~l~~~vv~g~~l~~a~v~~~ip~~~~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~~ 494 (495)
+=-+.||.|..-+.+.++. -++++.|.+||.+ ++|++|+....++..+|++
T Consensus 203 ~gvv~vv~g~~~~g~~L~~--~~~v~~I~FTGS~---~~G~~i~~~aa~~l~pv~l 253 (495)
T 3b4w_A 203 EGVLSVVPGGIETGQALTS--NPDIDMFTFTGSS---AVGREVGRRAAEMLKPCTL 253 (495)
T ss_dssp TTSEEECCBSHHHHHHHTT--CTTCCEEEEESCH---HHHHHHHHHHHHTTCCEEE
T ss_pred cCeEEEEeCCHHHHHHHHh--CCCcCEEEEeCCH---HHHHHHHHHhhhcCCceee
Confidence 4447788883323333333 3579999999998 9999999998888888875
No 68
>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}
Probab=54.51 E-value=7.3 Score=41.52 Aligned_cols=30 Identities=23% Similarity=0.261 Sum_probs=26.1
Q ss_pred CCceEEEeccCCchhHHHHHHHHHhhcCcEee
Q 011017 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVS 493 (495)
Q Consensus 462 ~~~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~ 493 (495)
.-+-|++||++ +-+|+++|.+|.++|.+++
T Consensus 250 ~~~~vLITGgs--gGIG~~lA~~La~~G~~~v 279 (525)
T 3qp9_A 250 ADGTVLVTGAE--EPAAAEAARRLARDGAGHL 279 (525)
T ss_dssp TTSEEEESSTT--SHHHHHHHHHHHHHTCCEE
T ss_pred CCCEEEEECCC--CcHHHHHHHHHHHcCCCEE
Confidence 34679999999 6999999999999999844
No 69
>3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti}
Probab=54.27 E-value=15 Score=39.27 Aligned_cols=51 Identities=20% Similarity=0.242 Sum_probs=37.0
Q ss_pred CcceEEecCCch-hhHhhhhcCCCCCceEEEeccCCchhHHHHHHHHHhhcCcEeee
Q 011017 439 KLKIKVVDGSSL-AAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVSF 494 (495)
Q Consensus 439 ~l~~~vv~g~~l-~~a~v~~~ip~~~~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~~ 494 (495)
+=-+.||.|+.- +.+.++. -++++.|.+||++ ++|+.|+....++..+|.+
T Consensus 218 ~gvv~vv~g~~~~~g~~L~~--~p~vd~I~FTGS~---~~G~~i~~~aa~~lk~v~l 269 (528)
T 3u4j_A 218 DGVFNVVTGYGDPAGQVLAE--DPNVDMVAFTGSV---RVGTKLGEIAARTVKRVGL 269 (528)
T ss_dssp TTSEEECCCSSTTHHHHHHH--CTTCCEEEEESCH---HHHHHHHHHHHTTTCEEEE
T ss_pred CCeEEEEeCCcHHHHHHHHh--CCCcCEEEEeCCH---HHHHHHHHHHHhcCCceEE
Confidence 334677887432 2233332 3568999999998 8999999998888888865
No 70
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=54.25 E-value=15 Score=32.78 Aligned_cols=31 Identities=19% Similarity=0.221 Sum_probs=26.8
Q ss_pred CCceEEEeccCCchhHHHHHHHHHhhcCcEeee
Q 011017 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVSF 494 (495)
Q Consensus 462 ~~~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~~ 494 (495)
.-+.|+.+|++ +-+|++++..+.++|.+|+.
T Consensus 38 ~g~~vlV~Ga~--ggiG~~~~~~~~~~G~~V~~ 68 (198)
T 1pqw_A 38 PGERVLIHSAT--GGVGMAAVSIAKMIGARIYT 68 (198)
T ss_dssp TTCEEEETTTT--SHHHHHHHHHHHHHTCEEEE
T ss_pred CCCEEEEeeCC--ChHHHHHHHHHHHcCCEEEE
Confidence 34679999988 58999999999999999864
No 71
>2qgz_A Helicase loader, putative primosome component; structural genomics, PSI-2, protein structure initiative; 2.40A {Streptococcus pyogenes serotype M3}
Probab=54.06 E-value=14 Score=36.23 Aligned_cols=41 Identities=22% Similarity=0.378 Sum_probs=33.0
Q ss_pred hhhhcCCCC-CceEEEeccCCchh--HHHHHHHHHh-hcCcEeee
Q 011017 454 VVVNSLPKT-TAHVLLRGTVTANK--VANAVASSLC-QMGIKVSF 494 (495)
Q Consensus 454 ~v~~~ip~~-~~~v~l~g~~~~~k--~~~a~a~~lc-~~~~~v~~ 494 (495)
..+++.|++ -+-|+|+|.+..+| +++|||..+| ++|.+|..
T Consensus 142 ~~i~~~~~~~~~~lll~G~~GtGKT~La~aia~~~~~~~g~~v~~ 186 (308)
T 2qgz_A 142 DFVEQYPSAEQKGLYLYGDMGIGKSYLLAAMAHELSEKKGVSTTL 186 (308)
T ss_dssp HHHHHCSCSSCCEEEEECSTTSSHHHHHHHHHHHHHHHSCCCEEE
T ss_pred HHHHhccccCCceEEEECCCCCCHHHHHHHHHHHHHHhcCCcEEE
Confidence 355666654 57899999987788 8999999999 99988853
No 72
>2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A*
Probab=53.93 E-value=14 Score=38.84 Aligned_cols=51 Identities=16% Similarity=0.196 Sum_probs=37.4
Q ss_pred CcceEEecCCch-hhHhhhhcCCCCCceEEEeccCCchhHHHHHHHHHhhcCcEeee
Q 011017 439 KLKIKVVDGSSL-AAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVSF 494 (495)
Q Consensus 439 ~l~~~vv~g~~l-~~a~v~~~ip~~~~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~~ 494 (495)
+=-+.||.|+.- +...+++. ++++.|.+||.+ ++|++|+....++..+|++
T Consensus 199 ~gvv~vv~g~~~~~~~~L~~~--~~v~~V~fTGS~---~~g~~i~~~aa~~~~~v~l 250 (479)
T 2imp_A 199 RGVFNLVLGRGETVGQELAGN--PKVAMVSMTGSV---SAGEKIMATAAKNITKVCL 250 (479)
T ss_dssp TTSEEECCSCTTTHHHHHHHC--TTEEEEEEESCH---HHHHHHHHHHHTTTCEEEE
T ss_pred cCeEEEEECCcHHHHHHHHhC--CCcCEEEEeCCH---HHHHHHHHHHhccCCcEEE
Confidence 334678887542 22333332 478999999998 9999999999988898875
No 73
>2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A*
Probab=53.81 E-value=16 Score=38.61 Aligned_cols=51 Identities=8% Similarity=0.047 Sum_probs=37.1
Q ss_pred CcceEEecCCchhhHhhhhcCCCCCceEEEeccCCchhHHHHHHHHHhhcCcEeee
Q 011017 439 KLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVSF 494 (495)
Q Consensus 439 ~l~~~vv~g~~l~~a~v~~~ip~~~~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~~ 494 (495)
+=-+.||.|..-+.+.+++. ++++.|++||.+ ++|+.|+....++..+|.+
T Consensus 218 ~gvv~vv~g~~~~g~~L~~~--~~vd~I~FTGS~---~~g~~i~~~aa~~l~~v~l 268 (500)
T 2j6l_A 218 GAICSLTCGGADIGTAMAKD--ERVNLLSFTGST---QVGKQVGLMVQERFGRSLL 268 (500)
T ss_dssp GGGEEEECCSHHHHHHHHHC--TTCSEEEEESCH---HHHHHHHHHHHHTTCEEEE
T ss_pred cCeEEEEeCCHHHHHHHhcC--CCcCEEEEECCH---HHHHHHHHHhccCCCceEE
Confidence 44577888843333333332 478999999998 8999999988888878765
No 74
>3irv_A Cysteine hydrolase; structural genomics, PSI-2, protein structure initiative, CY hydrolase; 1.60A {Pseudomonas syringae PV}
Probab=53.73 E-value=75 Score=29.88 Aligned_cols=33 Identities=21% Similarity=0.227 Sum_probs=28.6
Q ss_pred CCCceEEEeccCCchhHHHHHHHHHhhcCcEeee
Q 011017 461 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVSF 494 (495)
Q Consensus 461 ~~~~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~~ 494 (495)
.+.++|+++|-.+ +=--.+.|+.+.++|.+|.+
T Consensus 137 ~gi~~lvi~G~~T-~~CV~~Ta~dA~~~Gy~V~v 169 (233)
T 3irv_A 137 RDVDTIIVCGTVT-NVCCETTIRDGVHREYKVIA 169 (233)
T ss_dssp TTCCEEEEEEECT-TTHHHHHHHHHHHTTCEEEE
T ss_pred CCCCeEEEEeecc-cHHHHHHHHHHHHCCCEEEE
Confidence 3899999999987 55558899999999999986
No 75
>4h7n_A Aldehyde dehydrogenase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ALDH_ddaldh, COG1012, glyco_hydro_97; 2.00A {Anabaena variabilis}
Probab=53.19 E-value=13 Score=39.06 Aligned_cols=47 Identities=21% Similarity=0.272 Sum_probs=37.3
Q ss_pred ceEEecCCchhhHhhhhcCCCCCceEEEeccCCchhHHHHHHHHHhhcCcEeee
Q 011017 441 KIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVSF 494 (495)
Q Consensus 441 ~~~vv~g~~l~~a~v~~~ip~~~~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~~ 494 (495)
-+-+|+|..-+++..+. .++.|.+||++ ++|++|+....++..+|.+
T Consensus 185 v~~~v~g~~~~~~~l~~----~v~~v~FTGS~---~~G~~i~~~aa~~~~~v~l 231 (474)
T 4h7n_A 185 VLIFVEGGGETGANLIN----YVDFVCFTGSV---ATGREVAETAARRFIPAYL 231 (474)
T ss_dssp TEEECCCCHHHHHHHHT----TCSEEEEESCH---HHHHHHHHHHHHHTCCEEE
T ss_pred ceeeccccchhhhhhhh----ccceEEecccc---chhhhhhhhhhcccccccc
Confidence 35677787666666553 27789999998 9999999999999988875
No 76
>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A
Probab=52.80 E-value=13 Score=38.87 Aligned_cols=32 Identities=22% Similarity=0.136 Sum_probs=27.0
Q ss_pred CCCceEEEeccCCchhHHHHHHHHHh-hcCcEeee
Q 011017 461 KTTAHVLLRGTVTANKVANAVASSLC-QMGIKVSF 494 (495)
Q Consensus 461 ~~~~~v~l~g~~~~~k~~~a~a~~lc-~~~~~v~~ 494 (495)
.+-|.|+.||+. |.+|+|+|.+|. +.|-.|+.
T Consensus 48 ~~pK~vLVtGaS--sGiGlA~AialAf~~GA~vi~ 80 (401)
T 4ggo_A 48 KAPKNVLVLGCS--NGYGLASRITAAFGYGAATIG 80 (401)
T ss_dssp CCCCEEEEESCS--SHHHHHHHHHHHHHHCCEEEE
T ss_pred CCCCEEEEECCC--CcHHHHHHHHHHhhCCCCEEE
Confidence 466899999999 699999999998 67877753
No 77
>3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308}
Probab=51.51 E-value=17 Score=38.52 Aligned_cols=52 Identities=13% Similarity=0.208 Sum_probs=36.8
Q ss_pred CcceEEecCCchhhHhhhhcCCCCCceEEEeccCCchhHHHHHHHHHhhcCcEeee
Q 011017 439 KLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVSF 494 (495)
Q Consensus 439 ~l~~~vv~g~~l~~a~v~~~ip~~~~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~~ 494 (495)
+=-+.||.|..-.+..-|-+ -++++.|.+||++ ++|++|+....++..+|.+
T Consensus 225 ~gv~~vv~g~~~~~g~~L~~-~p~v~~V~FTGS~---~~G~~i~~~aa~~lk~v~l 276 (504)
T 3ek1_A 225 AGVLQIVTGKAREIGAELTS-NDTVRKLSFTGST---EVGRLLMAQCAPTIKRISL 276 (504)
T ss_dssp TTTEEECCSCHHHHHHHHHH-CTTCCEEEEESCH---HHHHHHHHHHGGGTCEEEE
T ss_pred cccEEEEeCCCHHHHHHHHh-CCCcCEEEEECCH---HHHHHHHHhhhhhcCCeEe
Confidence 44467787754322222222 3468999999998 8999999998888888865
No 78
>3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei}
Probab=51.24 E-value=15 Score=39.07 Aligned_cols=52 Identities=15% Similarity=0.247 Sum_probs=38.6
Q ss_pred CCCcceEEecCCch-hhHhhhhcCCCCCceEEEeccCCchhHHHHHHHHHhhcCcEeee
Q 011017 437 PNKLKIKVVDGSSL-AAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVSF 494 (495)
Q Consensus 437 p~~l~~~vv~g~~l-~~a~v~~~ip~~~~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~~ 494 (495)
| +=-+.||.|+.- +.+.++. -++++.|.+||++ ++|+.|+....++..+|++
T Consensus 203 P-~gvv~vv~g~~~~~g~~L~~--~p~vd~I~FTGS~---~vG~~i~~~aa~~l~~v~l 255 (506)
T 3rh9_A 203 P-DGMVNLVMGKASVIGKVLCE--HKDVPMLSFTGST---EVGRKLIVDTAEQVKKLAL 255 (506)
T ss_dssp C-TTSEEECCSCHHHHHHHHHH--CTTCCEEEEESCH---HHHHHHHHHTTTTTCEEEE
T ss_pred C-hhhEEEEeCCChHHHHHHHh--CCCCCEEEEECCH---HHHHHHHHHhhhcCCceEE
Confidence 5 445778888643 2333333 4569999999998 8999999998888888875
No 79
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=50.67 E-value=5.8 Score=34.03 Aligned_cols=29 Identities=24% Similarity=0.281 Sum_probs=25.7
Q ss_pred CceEEEeccCCchhHHHHHHHHHhhcCcEeee
Q 011017 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVSF 494 (495)
Q Consensus 463 ~~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~~ 494 (495)
-+.|.+.|+. .+|+++|..|+++|++|.+
T Consensus 21 ~~~v~iiG~G---~iG~~~a~~l~~~g~~v~v 49 (144)
T 3oj0_A 21 GNKILLVGNG---MLASEIAPYFSYPQYKVTV 49 (144)
T ss_dssp CCEEEEECCS---HHHHHHGGGCCTTTCEEEE
T ss_pred CCEEEEECCC---HHHHHHHHHHHhCCCEEEE
Confidence 6789999975 9999999999999998764
No 80
>1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A*
Probab=50.61 E-value=20 Score=37.99 Aligned_cols=51 Identities=18% Similarity=0.207 Sum_probs=36.7
Q ss_pred CcceEEecCCch-hhHhhhhcCCCCCceEEEeccCCchhHHHHHHHHHh-hcCcEeee
Q 011017 439 KLKIKVVDGSSL-AAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLC-QMGIKVSF 494 (495)
Q Consensus 439 ~l~~~vv~g~~l-~~a~v~~~ip~~~~~v~l~g~~~~~k~~~a~a~~lc-~~~~~v~~ 494 (495)
+=-+.||.|+.- +.+.++. -++++.|.+||.+ ++|+.|+.... ++..+|.+
T Consensus 216 ~gv~~vv~g~~~~~g~~L~~--~~~v~~I~FTGS~---~~G~~i~~~aa~~~l~~v~l 268 (501)
T 1bxs_A 216 PGVVNIVPGYGPTAGAAISS--HMDVDKVAFTGST---EVGKLIKEAAGKSNLKRVSL 268 (501)
T ss_dssp TTSEEECCSCTTTHHHHHHT--CTTCSEEEEESCH---HHHHHHHHHHHHTTCCEEEE
T ss_pred cceEEEEecCchHHHHHHHh--CCCcCEEEEECCH---HHHHHHHHHhhhccCCcEEE
Confidence 444677877432 2233333 3479999999998 99999999888 78888865
No 81
>3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti}
Probab=50.52 E-value=19 Score=38.38 Aligned_cols=49 Identities=14% Similarity=0.093 Sum_probs=36.3
Q ss_pred ceEEecCCch-hhHhhhhcCCCCCceEEEeccCCchhHHHHHHHHHhhcC--cEeee
Q 011017 441 KIKVVDGSSL-AAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMG--IKVSF 494 (495)
Q Consensus 441 ~~~vv~g~~l-~~a~v~~~ip~~~~~v~l~g~~~~~k~~~a~a~~lc~~~--~~v~~ 494 (495)
-+.||.|..- +.+.++. -++++.|.+||++ .+|++|+....++. ++|++
T Consensus 234 vv~vv~g~~~~~g~~L~~--~p~v~~V~fTGS~---~~G~~i~~~aa~~~~~~pv~l 285 (528)
T 3v4c_A 234 VFSLIQGGSRDVGHALVQ--HPHIKAVGFTGSL---AGGRALFDLCAARPEPIPFFG 285 (528)
T ss_dssp GEEEECCCCHHHHHHHHH--CTTCCEEEEESCH---HHHHHHHHHHHHSSSCCCEEE
T ss_pred eEEEEeCCCHHHHHHHHh--CCCCCEEEEECCh---HHHHHHHHHHhhccCCCceEE
Confidence 4667887542 3333333 3578999999998 89999999988887 78765
No 82
>1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ...
Probab=50.47 E-value=19 Score=38.17 Aligned_cols=51 Identities=14% Similarity=0.218 Sum_probs=36.4
Q ss_pred CcceEEecCCch-hhHhhhhcCCCCCceEEEeccCCchhHHHHHHHHHh-hcCcEeee
Q 011017 439 KLKIKVVDGSSL-AAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLC-QMGIKVSF 494 (495)
Q Consensus 439 ~l~~~vv~g~~l-~~a~v~~~ip~~~~~v~l~g~~~~~k~~~a~a~~lc-~~~~~v~~ 494 (495)
+=-+.||.|+.- +.+.++. -++++.|.+||.+ ++|+.|+.... ++..+|++
T Consensus 215 ~gvv~vv~g~~~~~g~~L~~--~p~v~~I~FTGS~---~~G~~i~~~aa~~~l~pv~l 267 (500)
T 1o04_A 215 PGVVNIVPGFGPTAGAAIAS--HEDVDKVAFTGST---EIGRVIQVAAGSSNLKRVTL 267 (500)
T ss_dssp TTSEEECCBCTTTHHHHHHT--CTTCCEEEEESCH---HHHHHHHHHHHHTTCCEEEE
T ss_pred cCeEEEEecCcHHHHHHHHh--CCCcCEEEEECCH---HHHHHHHHhhhhhcCceEEE
Confidence 334677777432 2233332 3478999999998 99999999988 88888865
No 83
>2od4_A Hypothetical protein; metagenomics target, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.70A {Uncultured marine organism} SCOP: d.58.4.20
Probab=50.42 E-value=0.56 Score=38.15 Aligned_cols=48 Identities=27% Similarity=0.371 Sum_probs=35.6
Q ss_pred cCCeEEEecccccc-ccccccceeeeccCCCCcceEEecCCchhhHhhhhcCCCCCceE
Q 011017 409 KGVKVISLGLLNQG-EELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKTTAHV 466 (495)
Q Consensus 409 ~g~kv~sl~~ln~~-~~ln~~g~~~~~~~p~~l~~~vv~g~~l~~a~v~~~ip~~~~~v 466 (495)
...||+|||+.... -+-|.+..+|+..+| | .-||-.|...|-++++||
T Consensus 35 wspkvislgaisaefvqsnensgmyiihyp-d---------kqtaisvfdkikpevdev 83 (101)
T 2od4_A 35 WSPKVISLGAISAEFVQSNENSGMYIIHYP-D---------KQTAISVFDKIKPEVDEV 83 (101)
T ss_dssp HHHHHHHHTCSEEEEEEEETTEEEEEEEES-S---------HHHHHHHHHHHHHHHHHH
T ss_pred CCccEEEecceeHhhhccCcCCceEEEECC-C---------ccceeehhhccCcchhhh
Confidence 34689999998643 356788889999999 4 357888888886655543
No 84
>3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa}
Probab=50.40 E-value=14 Score=38.84 Aligned_cols=49 Identities=12% Similarity=0.208 Sum_probs=36.1
Q ss_pred CcceEEecCCchhhHhhhhcCCCCCceEEEeccCCchhHHHHHHHHHhhcCcEe
Q 011017 439 KLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKV 492 (495)
Q Consensus 439 ~l~~~vv~g~~l~~a~v~~~ip~~~~~v~l~g~~~~~k~~~a~a~~lc~~~~~v 492 (495)
+=-+.||+|+.-+...++. -++++.|++||.+ .+|++|+....++..+|
T Consensus 196 ~gvv~vv~g~~~~~~~L~~--~~~v~~V~fTGS~---~~g~~i~~~aa~~~~~v 244 (490)
T 3ju8_A 196 AGVLNLVQGGRETGVALAA--HRGLDGLFFTGSS---RTGNLLHSQFGGQPQKI 244 (490)
T ss_dssp TTTEEECCCSHHHHHHHHT--CTTCSEEEEESCH---HHHHHHHHHTTTCTTSE
T ss_pred cCeEEEEeCCHHHHHHHHh--CCCcCEEEEECcH---HHHHHHHHHhhccCCCc
Confidence 3346788885433333443 3568999999998 89999999888888776
No 85
>3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C}
Probab=49.96 E-value=14 Score=38.97 Aligned_cols=51 Identities=10% Similarity=0.193 Sum_probs=36.5
Q ss_pred CcceEEecCCch-hhHhhhhcCCCCCceEEEeccCCchhHHHHHHHHHhhcCcEeee
Q 011017 439 KLKIKVVDGSSL-AAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVSF 494 (495)
Q Consensus 439 ~l~~~vv~g~~l-~~a~v~~~ip~~~~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~~ 494 (495)
+=-+.||.|+.- +.+.++ + -++++.|.+||++ ++|++|+....++..+|++
T Consensus 205 ~gvv~vv~g~~~~~g~~L~-~-~p~vd~I~fTGS~---~~G~~i~~~aa~~l~pv~l 256 (497)
T 3k2w_A 205 DGVLNVINGTGSVVGQTLC-E-SPITKMITMTGST---VAGKQIYKTSAEYMTPVML 256 (497)
T ss_dssp TTSEEECCSCTTTHHHHHH-H-CSSEEEEEEESCH---HHHHHHHHHHTTTTCCEEE
T ss_pred cCeEEEEeCCchHHHHHHH-h-CCCcCEEEEECcH---HHHHHHHHHhhhcCCCeEE
Confidence 445778887442 222333 2 2478999999998 8999999998888888764
No 86
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=49.59 E-value=8.9 Score=37.65 Aligned_cols=31 Identities=16% Similarity=0.248 Sum_probs=26.2
Q ss_pred CCCceEEEeccCCchhHHHHHHHHHhhcCc-Eeee
Q 011017 461 KTTAHVLLRGTVTANKVANAVASSLCQMGI-KVSF 494 (495)
Q Consensus 461 ~~~~~v~l~g~~~~~k~~~a~a~~lc~~~~-~v~~ 494 (495)
-.-+.|+++|+. -.|||+|.+|.+.|+ +|.+
T Consensus 115 l~~k~vlvlGaG---g~g~aia~~L~~~G~~~v~v 146 (277)
T 3don_A 115 IEDAYILILGAG---GASKGIANELYKIVRPTLTV 146 (277)
T ss_dssp GGGCCEEEECCS---HHHHHHHHHHHTTCCSCCEE
T ss_pred cCCCEEEEECCc---HHHHHHHHHHHHCCCCEEEE
Confidence 345789999986 799999999999999 6764
No 87
>1im5_A 180AA long hypothetical pyrazinamidase/nicotinamidase; pyrazinamide, tuberculosis, PZA resistance, drug resistance, metal ION catalysis; 1.65A {Pyrococcus horikoshii} SCOP: c.33.1.3 PDB: 1ilw_A
Probab=49.11 E-value=65 Score=28.73 Aligned_cols=37 Identities=19% Similarity=0.280 Sum_probs=30.2
Q ss_pred hhhcCCCCCceEEEeccCCchhHHHHHHHHHhhcCcEeee
Q 011017 455 VVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVSF 494 (495)
Q Consensus 455 v~~~ip~~~~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~~ 494 (495)
.|++ .|.++|+++|-.+ +=--.+.|+-+.++|.+|.+
T Consensus 114 ~L~~--~gi~~lvi~G~~t-~~CV~~Ta~da~~~Gy~v~v 150 (180)
T 1im5_A 114 ILRG--NGVKRVYICGVAT-EYCVRATALDALKHGFEVYL 150 (180)
T ss_dssp HHHH--TTCCEEEEEEECT-TTHHHHHHHHHHHTTCEEEE
T ss_pred HHHh--CCCCEEEEEEeec-CHHHHHHHHHHHHCCCEEEE
Confidence 4444 3899999999987 55558899999999999986
No 88
>1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A*
Probab=49.02 E-value=20 Score=37.92 Aligned_cols=51 Identities=14% Similarity=0.085 Sum_probs=35.7
Q ss_pred CcceEEecCCch-hhHhhhhcCCCCCceEEEeccCCchhHHHHHHHHHhhcC--cEeee
Q 011017 439 KLKIKVVDGSSL-AAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMG--IKVSF 494 (495)
Q Consensus 439 ~l~~~vv~g~~l-~~a~v~~~ip~~~~~v~l~g~~~~~k~~~a~a~~lc~~~--~~v~~ 494 (495)
.=-+.||.|..- +...++. -++++.|.+||++ ++|+.|+....++. .+|++
T Consensus 199 ~gvv~vv~g~~~~~g~~L~~--~p~v~~I~FTGS~---~~G~~i~~~aa~~l~~~pv~l 252 (510)
T 1ez0_A 199 QAIFTLLQGNQRALGQALVS--HPEIKAVGFTGSV---GGGRALFNLAHERPEPIPFYG 252 (510)
T ss_dssp GGGEEEECCSCTHHHHHHHH--CTTCCEEEEESCH---HHHHHHHHHHHHSSSCCCEEE
T ss_pred CCeEEEEeCCcHHHHHHHHc--CCCCCEEEEeCcH---HHHHHHHHHhhccCCCccEEE
Confidence 334677887432 2333333 2478999999998 99999999888774 77764
No 89
>2oqb_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase, transcriptional regulati activation domain; 1.69A {Rattus norvegicus}
Probab=49.00 E-value=6.9 Score=34.13 Aligned_cols=58 Identities=14% Similarity=0.244 Sum_probs=40.2
Q ss_pred cCCeEEEeccccccccccccc----eeeeccCCCCcceEEecCCchhhHhhhhcCCCCCceEEEeccCCchhHH
Q 011017 409 KGVKVISLGLLNQGEELNRNG----EIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVA 478 (495)
Q Consensus 409 ~g~kv~sl~~ln~~~~ln~~g----~~~~~~~p~~l~~~vv~g~~l~~a~v~~~ip~~~~~v~l~g~~~~~k~~ 478 (495)
.||.|+++|--| ++--|.+. +|.++.+|+++.||+.+|. +..+.|-.+|.+|.-++||
T Consensus 11 ~gv~v~~I~d~~-~~~~~ky~~q~v~L~~~ydpqg~sv~i~~~~-----------~~~l~ef~V~~~TEc~rVG 72 (117)
T 2oqb_A 11 PGARLLTIGDAN-GEIQRHAEQQALRLEVRAGPDAAGIALYSHE-----------DVCVFKCSVSRETECSRVG 72 (117)
T ss_dssp EEEEEEEEECTT-SSCEEEEEEEEEEEEEEECSSEEEEEEECTT-----------CCEEEEEEEETTSEEEEET
T ss_pred CceEEEEEeCCC-CcEeecccCceEEEEEEECCCCcEEEEEcCC-----------CeEEEEEEecCCccceeec
Confidence 489999998765 22244444 7888899999999999986 4455566666666444443
No 90
>3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q
Probab=48.95 E-value=17 Score=38.25 Aligned_cols=49 Identities=16% Similarity=0.204 Sum_probs=34.9
Q ss_pred ceEEecCCchh-hHhhhhcCCCCCceEEEeccCCchhHHHHHHHHHhhcCcEeee
Q 011017 441 KIKVVDGSSLA-AAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVSF 494 (495)
Q Consensus 441 ~~~vv~g~~l~-~a~v~~~ip~~~~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~~ 494 (495)
-+.||.|+.-. ...++ + .++++.|.+||++ ++|++|+....++..+|.+
T Consensus 207 v~~vv~g~~~~~g~~L~-~-~p~v~~v~FTGS~---~~G~~i~~~aa~~~k~v~l 256 (484)
T 3ifg_A 207 VLSVVIGDPKAIGTEIT-S-NPIVRKLSFTGST---AVGRLLMAQSAPTVKKLTL 256 (484)
T ss_dssp SEEECCBCHHHHHHHHH-H-CTTCCEEEEESCH---HHHHHHHHHTGGGTCEEEE
T ss_pred cEEEEeCCCHHHHHHHH-h-CCCcCEEEEECCH---HHHHHHHHHhhccCCceEE
Confidence 46677775322 22222 2 3468999999998 8999999998888888864
No 91
>3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli}
Probab=48.89 E-value=16 Score=38.29 Aligned_cols=53 Identities=21% Similarity=0.212 Sum_probs=37.4
Q ss_pred CCCcceEEecCCchhhHhhhhcCCCCCceEEEeccCCchhHHHHHHHHHhhcCcEeee
Q 011017 437 PNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVSF 494 (495)
Q Consensus 437 p~~l~~~vv~g~~l~~a~v~~~ip~~~~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~~ 494 (495)
| +=-+.+|+|+.-.+..-|-+ -++++.|++||++ ++|++|+....++..+|.+
T Consensus 201 P-~gvv~vv~g~~~~~g~~L~~-~p~v~~I~fTGS~---~~g~~i~~~aa~~~~~v~l 253 (481)
T 3jz4_A 201 P-AGVFNVVTGSAGAVGNELTS-NPLVRKLSFTGST---EIGRQLMEQCAKDIKKVSL 253 (481)
T ss_dssp C-TTTEEECCBCTHHHHHHHHH-CTTEEEEEEESCH---HHHHHHHHHHTTTTCEEEE
T ss_pred C-CCeEEEEeCCChHHHHHHHh-CCCcCEEEEECCH---HHHHHHHHHHhhcCCceEE
Confidence 5 44577888854322222222 2468899999998 8999999998888888864
No 92
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=48.55 E-value=11 Score=36.85 Aligned_cols=45 Identities=24% Similarity=0.345 Sum_probs=31.0
Q ss_pred cCCchhhHhhhhcCCCCCceEEEeccCCchhHHHHHHHHHhhcCc-Eeee
Q 011017 446 DGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGI-KVSF 494 (495)
Q Consensus 446 ~g~~l~~a~v~~~ip~~~~~v~l~g~~~~~k~~~a~a~~lc~~~~-~v~~ 494 (495)
||.....+.--..+++ -+.|++.|+. ..|||+|.+|+++|+ +|.+
T Consensus 103 D~~G~~~~l~~~~~~~-~~~vlvlGaG---gaarav~~~L~~~G~~~i~v 148 (271)
T 1npy_A 103 DYIAIVKLIEKYHLNK-NAKVIVHGSG---GMAKAVVAAFKNSGFEKLKI 148 (271)
T ss_dssp HHHHHHHHHHHTTCCT-TSCEEEECSS---TTHHHHHHHHHHTTCCCEEE
T ss_pred CHHHHHHHHHHhCCCC-CCEEEEECCc---HHHHHHHHHHHHCCCCEEEE
Confidence 3444444432223333 3789999997 789999999999998 5654
No 93
>4gel_A Mitochondrial cardiolipin hydrolase; piRNA, phospholipase D, nuclease; 1.76A {Drosophila melanogaster} PDB: 4gem_A 4gen_A
Probab=48.41 E-value=39 Score=30.86 Aligned_cols=78 Identities=12% Similarity=0.150 Sum_probs=45.0
Q ss_pred HHHHHHHHHHHhcCCeEEEecccccc----------ccccccceeeeccCC--CCcceEEecCCchhhHhhhh---cCCC
Q 011017 397 SLIEEAILEADAKGVKVISLGLLNQG----------EELNRNGEIYLERQP--NKLKIKVVDGSSLAAAVVVN---SLPK 461 (495)
Q Consensus 397 ~~ie~ai~~a~~~g~kv~sl~~ln~~----------~~ln~~g~~~~~~~p--~~l~~~vv~g~~l~~a~v~~---~ip~ 461 (495)
+.|-+|+.+|-++||+|==|- +.. +.++.++.......+ ...|.-|+||..-....-.. .+.-
T Consensus 84 ~~I~~aL~~Aa~RGV~VRii~--D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~K~~viD~~~~~~~~~~~~H~K~~v 161 (220)
T 4gel_A 84 LFLADSIKRALQRGVIIRIIS--DGEMVYSKGSQISMLAQLGVPVRVPITTNLMHNKFCIIDGFERVEEIRLLRKLKFMR 161 (220)
T ss_dssp HHHHHHHHHHHHHTCEEEEEC--CTTTTTSTTCHHHHHHHTTCCEEECCSSSCBCCCEEEESCHHHHHHHHHHTTCSCCC
T ss_pred HHHHHHHHHHHHcCCeEEEEE--echhhhhhHHHHHHHHhcCCcEEeecccccccceeEEEcchhcccccccccceeccc
Confidence 457889999999999986652 211 122334444444333 25578899986543322111 2222
Q ss_pred CCceEEEeccCCchh
Q 011017 462 TTAHVLLRGTVTANK 476 (495)
Q Consensus 462 ~~~~v~l~g~~~~~k 476 (495)
...++.+||..+.+.
T Consensus 162 ~D~~~v~~GS~N~t~ 176 (220)
T 4gel_A 162 PCYSIVISGSVNWTA 176 (220)
T ss_dssp CCCCEEEEESCCBSH
T ss_pred cccceEEecCccccc
Confidence 335678888887654
No 94
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=47.81 E-value=40 Score=33.02 Aligned_cols=83 Identities=16% Similarity=0.183 Sum_probs=53.4
Q ss_pred hcCCeEEEeccccccc-ccc-ccceeeeccCC-CCcceEEecCCchhhH-------hhhhc-CCCCCceEEEeccCCchh
Q 011017 408 AKGVKVISLGLLNQGE-ELN-RNGEIYLERQP-NKLKIKVVDGSSLAAA-------VVVNS-LPKTTAHVLLRGTVTANK 476 (495)
Q Consensus 408 ~~g~kv~sl~~ln~~~-~ln-~~g~~~~~~~p-~~l~~~vv~g~~l~~a-------~v~~~-ip~~~~~v~l~g~~~~~k 476 (495)
-.|+|+++.=-=|..+ .|= -.|.+.+. .| ...-.=++||+.||+. +-... -+++.+.|-+.|.. .
T Consensus 70 ~~g~K~~~~~p~N~~~~glp~~~~~~~l~-d~~tG~p~a~~d~~~lt~~rT~a~~~la~~~la~~~~~~igiIG~G---~ 145 (312)
T 2i99_A 70 ALTTKLVTFYEDRGITSVVPSHQATVLLF-EPSNGTLLAVMDGNVITAKRTAAVSAIATKFLKPPSSEVLCILGAG---V 145 (312)
T ss_dssp EEEEEEEEEECCCSSSSCSSSEEEEEEEE-CTTTCCEEEEEECHHHHHHHHHHHHHHHHHHHSCTTCCEEEEECCS---H
T ss_pred EEEEEEEEecCCCccccCCCceEEEEEEE-ECCCCCEEEEEcchhHHHHHHHHHHHHHHHHhCCCCCcEEEEECCc---H
Confidence 4699999875555433 221 12333322 22 2455778999988741 11122 25678899999987 9
Q ss_pred HHHHHHHHHhhc-Cc-Eeee
Q 011017 477 VANAVASSLCQM-GI-KVSF 494 (495)
Q Consensus 477 ~~~a~a~~lc~~-~~-~v~~ 494 (495)
+|+++|.+|++. |+ +|.+
T Consensus 146 ~g~~~a~~l~~~~g~~~V~v 165 (312)
T 2i99_A 146 QAYSHYEIFTEQFSFKEVRI 165 (312)
T ss_dssp HHHHHHHHHHHHCCCSEEEE
T ss_pred HHHHHHHHHHHhCCCcEEEE
Confidence 999999999986 87 6654
No 95
>3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum}
Probab=47.77 E-value=23 Score=37.48 Aligned_cols=51 Identities=16% Similarity=0.111 Sum_probs=35.9
Q ss_pred CcceEEecCCc-hhhHhhhhcCCCCCceEEEeccCCchhHHHHHHHHHhh--cCcEeee
Q 011017 439 KLKIKVVDGSS-LAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQ--MGIKVSF 494 (495)
Q Consensus 439 ~l~~~vv~g~~-l~~a~v~~~ip~~~~~v~l~g~~~~~k~~~a~a~~lc~--~~~~v~~ 494 (495)
+=-+.||.|+. -+...++. -++++.|++||.+ ++|++|+....+ +..+|++
T Consensus 206 ~gvv~vv~g~~~~~g~~L~~--~p~vd~I~fTGS~---~~g~~i~~~aa~~~~l~~v~l 259 (508)
T 3r64_A 206 AGVISTVAGAGSEIGDHFVT--HAVPKLISFTGST---PVGRRVGELAINGGPMKTVAL 259 (508)
T ss_dssp TTTEEECCCCTTTTHHHHHH--CSSCSEEEEESCH---HHHHHHHHHHHSSSSCCEEEE
T ss_pred cCeEEEEeCCCHHHHHHHhh--CCCccEEEEECCH---HHHHHHHHHhhcccCCCceEe
Confidence 33467777753 23333333 4578999999998 899999988777 6777764
No 96
>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*
Probab=46.37 E-value=11 Score=40.05 Aligned_cols=28 Identities=25% Similarity=0.262 Sum_probs=23.9
Q ss_pred ceEEEeccCCchhHHHHHHHHHhhcCcEeee
Q 011017 464 AHVLLRGTVTANKVANAVASSLCQMGIKVSF 494 (495)
Q Consensus 464 ~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~~ 494 (495)
+.|++||+. -+|+|+|.+|+++|.+|.+
T Consensus 365 k~vlV~GaG---Gig~aia~~L~~~G~~V~i 392 (523)
T 2o7s_A 365 KTVVVIGAG---GAGKALAYGAKEKGAKVVI 392 (523)
T ss_dssp -CEEEECCS---HHHHHHHHHHHHHCC-CEE
T ss_pred CEEEEECCc---HHHHHHHHHHHHCCCEEEE
Confidence 579999995 8999999999999998875
No 97
>4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis}
Probab=46.31 E-value=18 Score=37.93 Aligned_cols=51 Identities=6% Similarity=0.025 Sum_probs=36.6
Q ss_pred CcceEEecCCch-hhHhhhhcCCCCCceEEEeccCCchhHHHHHHHHHhhcCcEeee
Q 011017 439 KLKIKVVDGSSL-AAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVSF 494 (495)
Q Consensus 439 ~l~~~vv~g~~l-~~a~v~~~ip~~~~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~~ 494 (495)
.=-+.+|.|+.- +.+.++. -++++.|.+||.+ ++|+.|+....++..+|++
T Consensus 201 ~gvv~vv~g~~~~~~~~L~~--~p~v~~v~fTGS~---~~g~~i~~~aa~~~~~v~l 252 (485)
T 4dng_A 201 AGVLNVMLTDVKEIGDGMLT--NPIPRLISFTGST---AVGRHIGEIAGRAFKRMAL 252 (485)
T ss_dssp TTSEEECCCCHHHHTTHHHH--CSSCSEEEEEECH---HHHHHHHHHHHHHTCEEEE
T ss_pred CCeEEEEeCCChhHHHHHHh--CCCCCEEEEECCc---HHHHHHHHHHhhhccchhh
Confidence 444677777653 2222222 2478899999998 8999999998888888875
No 98
>1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A*
Probab=46.27 E-value=24 Score=37.46 Aligned_cols=51 Identities=10% Similarity=0.078 Sum_probs=35.9
Q ss_pred CcceEEecCCc-hhhHhhhhcCCCCCceEEEeccCCchhHHHHHHHHHh------hcCcEeee
Q 011017 439 KLKIKVVDGSS-LAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLC------QMGIKVSF 494 (495)
Q Consensus 439 ~l~~~vv~g~~-l~~a~v~~~ip~~~~~v~l~g~~~~~k~~~a~a~~lc------~~~~~v~~ 494 (495)
.=-+.||.|+. -+.+.++. -++++.|.+||++ ++|+.|+.... ++..+|++
T Consensus 230 ~gvv~vv~g~~~~~~~~L~~--~~~v~~I~FTGS~---~~G~~i~~~aa~~~~~~~~~~~v~l 287 (516)
T 1uzb_A 230 PGVVNFLPGVGEEVGAYLVE--HPRIRFINFTGSL---EVGLKIYEAAGRLAPGQTWFKRAYV 287 (516)
T ss_dssp TTSEEECCCSSSHHHHHHHT--CTTCCEEEEESCH---HHHHHHHHHHTSCCTTCCSCCEEEE
T ss_pred cCeEEEEeCCCchhhhhhhc--CCCcCEEEecCCH---HHHHHHHHHhhhccccccccceeEE
Confidence 33467777743 23333443 3579999999998 99999998877 56777764
No 99
>2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A*
Probab=46.00 E-value=24 Score=37.61 Aligned_cols=51 Identities=20% Similarity=0.283 Sum_probs=37.4
Q ss_pred CCCcceEEecCCc--hhhHhhhhcCCCCCceEEEeccCCchhHHHHHHHHHh-hcCcEeee
Q 011017 437 PNKLKIKVVDGSS--LAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLC-QMGIKVSF 494 (495)
Q Consensus 437 p~~l~~~vv~g~~--l~~a~v~~~ip~~~~~v~l~g~~~~~k~~~a~a~~lc-~~~~~v~~ 494 (495)
| +=-+.||.|.. ...+ ++ +- ++++.|.+||.+ ++|+.|+.... ++..+|.+
T Consensus 234 P-~gvv~vv~g~g~~~g~~-L~-~~-~~v~~V~FTGS~---~~G~~I~~~aa~~~lk~v~l 287 (517)
T 2o2p_A 234 P-KGVVNILPGSGSLVGQR-LS-DH-PDVRKIGFTGST---EVGKHIMKSCALSNVKKVSL 287 (517)
T ss_dssp C-TTSEEECCSCHHHHHHH-HH-HC-TTCCEEEEESCH---HHHHHHHHHHHHHTCCEEEE
T ss_pred C-cCeEEEEeCCCHHHHHH-HH-hC-CCCCEEEEECCH---HHHHHHHHHhHHhcCCeEEE
Confidence 5 44577888854 3333 22 22 479999999998 99999999888 77888875
No 100
>1x9g_A Putative MAR1; structural genomics, protein structure initiative, SGPP, PSI structural genomics of pathogenic protozoa consortium; 2.41A {Leishmania donovani} SCOP: c.33.1.3 PDB: 1xn4_A
Probab=45.79 E-value=1.1e+02 Score=28.08 Aligned_cols=32 Identities=13% Similarity=0.150 Sum_probs=28.6
Q ss_pred CCceEEEeccCCchhHHHHHHHHHhhcCcEeee
Q 011017 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVSF 494 (495)
Q Consensus 462 ~~~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~~ 494 (495)
|.++|+++|-.+ +=--.+.|..+.++|.+|.+
T Consensus 106 gi~~lvi~Gv~T-~~CV~~Ta~dA~~~Gy~V~V 137 (200)
T 1x9g_A 106 DVDNAVVFGIEG-HACILQTVADLLDMNKRVFL 137 (200)
T ss_dssp TCCEEEEEEECT-TTHHHHHHHHHHHTTCEEEE
T ss_pred CCCEEEEEEEec-CcHHHHHHHHHHhCCCEEEE
Confidence 999999999987 55568899999999999986
No 101
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=45.63 E-value=16 Score=32.23 Aligned_cols=28 Identities=21% Similarity=0.171 Sum_probs=24.9
Q ss_pred ceEEEeccCCchhHHHHHHHHHhhc-CcEeee
Q 011017 464 AHVLLRGTVTANKVANAVASSLCQM-GIKVSF 494 (495)
Q Consensus 464 ~~v~l~g~~~~~k~~~a~a~~lc~~-~~~v~~ 494 (495)
+.|.+.|.. ++|+.+|..|.++ |.+|.+
T Consensus 40 ~~v~IiG~G---~~G~~~a~~L~~~~g~~V~v 68 (183)
T 3c85_A 40 AQVLILGMG---RIGTGAYDELRARYGKISLG 68 (183)
T ss_dssp CSEEEECCS---HHHHHHHHHHHHHHCSCEEE
T ss_pred CcEEEECCC---HHHHHHHHHHHhccCCeEEE
Confidence 479999975 9999999999999 999875
No 102
>3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A
Probab=45.07 E-value=21 Score=37.23 Aligned_cols=51 Identities=16% Similarity=0.143 Sum_probs=35.3
Q ss_pred CcceEEecCCchhhHhhhhcCCCCCceEEEeccCCchhHHHHHHHHHhhcCcEeee
Q 011017 439 KLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVSF 494 (495)
Q Consensus 439 ~l~~~vv~g~~l~~a~v~~~ip~~~~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~~ 494 (495)
+=-+.+|.|+.=+...++. .++++.|.+||++ ++|++|+....++..+|.+
T Consensus 183 ~gv~~vv~g~~~~~~~l~~--~~~v~~v~fTGS~---~~g~~i~~~aa~~~~~v~l 233 (462)
T 3etf_A 183 AGVYGWVNANNEGVSQMIN--DPRIAAVTVTGSV---RAGAAIGAQAGAALKKCVL 233 (462)
T ss_dssp BTTEEECCCCHHHHHHHHT--STTEEEEEEESCH---HHHHHHHHHHHHTTCCEEE
T ss_pred cCeEEEEECCHHHHHHHhc--CCCCCEEEEeCCc---hHHHHHHHHHhccCCceEE
Confidence 3346677775322232322 3478899999998 8999999998888777764
No 103
>2b34_A F35G2.2, MAR1 ribonuclease; isochorismatase family, structural genomics, PSI, protein structure initiative; 2.14A {Caenorhabditis elegans}
Probab=45.06 E-value=57 Score=29.96 Aligned_cols=90 Identities=12% Similarity=0.074 Sum_probs=53.9
Q ss_pred hhhhHHHHHHHHHHHHhcCCeEEEecccc-----cccccc---ccceeeeccC-CCCcceEEecCCchhhHhhhhcCCCC
Q 011017 392 REAINSLIEEAILEADAKGVKVISLGLLN-----QGEELN---RNGEIYLERQ-PNKLKIKVVDGSSLAAAVVVNSLPKT 462 (495)
Q Consensus 392 ~~~in~~ie~ai~~a~~~g~kv~sl~~ln-----~~~~ln---~~g~~~~~~~-p~~l~~~vv~g~~l~~a~v~~~ip~~ 462 (495)
.+.+=.-|.+.+..|.+.|+.|+-----. ...+|- ++++..+.|+ ++ -..| || ...|++
T Consensus 33 ~~~~i~~i~~l~~~ar~~g~pVi~t~~~~~~~g~~~~el~~~l~~~~~vi~K~~~s-----aF~~-tL--~~~L~~---- 100 (199)
T 2b34_A 33 FPEIITTSRRLIDAARILSIPTIVTEQYPKGLGHTVPTLKEGLAENTPIFDKTKFS-----MCIP-PT--EDTLKK---- 100 (199)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCEEEEEESHHHHCCBCHHHHHHSCTTCCEEEESBSS-----SCCG-GG--HHHHTT----
T ss_pred HHHHHHHHHHHHHHHHHCCCcEEEEEecCCCCCCChHHHHhhCCCCCeeeecCccC-----Cccc-HH--HHHHcC----
Confidence 34444556666778899999998652110 011111 1113333333 21 1112 32 334555
Q ss_pred CceEEEeccCCchhHHHHHHHHHhhcCcEeee
Q 011017 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVSF 494 (495)
Q Consensus 463 ~~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~~ 494 (495)
.++|+++|-.+ +=-=.+.|..+.++|.+|.+
T Consensus 101 i~~lvi~G~~T-~~CV~~Ta~da~~~Gy~V~v 131 (199)
T 2b34_A 101 VQNVILVGIEA-HVCVLQTTYDLLERGLNVHV 131 (199)
T ss_dssp CSEEEEEEECT-TTHHHHHHHHHHHTTCEEEE
T ss_pred CCEEEEEEEec-CHHHHHHHHHHHHCCCEEEE
Confidence 89999999987 55568899999999999986
No 104
>4ggj_A Mitochondrial cardiolipin hydrolase; piRNA pathway, protein-RNA interactions, piRNA RNAI, HKD MOT zinc finger, nuclease, nucleic acid binding; 1.75A {Mus musculus} PDB: 4ggk_A
Probab=44.32 E-value=26 Score=32.09 Aligned_cols=53 Identities=19% Similarity=0.204 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHhcCCeEEEec-----cccc--cccccc-cceeeeccCC--CCcceEEecCCc
Q 011017 397 SLIEEAILEADAKGVKVISLG-----LLNQ--GEELNR-NGEIYLERQP--NKLKIKVVDGSS 449 (495)
Q Consensus 397 ~~ie~ai~~a~~~g~kv~sl~-----~ln~--~~~ln~-~g~~~~~~~p--~~l~~~vv~g~~ 449 (495)
+.|.+|+.+|-++||+|==+- ..|. -+.|.. |-+++..+.+ ..-|+=||||.+
T Consensus 72 ~~i~~aL~~aa~rGV~Vrii~D~~~~~~~~~~~~~l~~~gi~v~~~~~~~~~H~K~~viD~~~ 134 (196)
T 4ggj_A 72 PQLGRAVQLLHQRGVRVRVITDCDYMALNGSQIGLLRKAGIQVRHDQDLGYMHHKFAIVDKKV 134 (196)
T ss_dssp HHHHHHHHHHHHTTCEEEEEESSCCC---CCHHHHHHHTTCEEEECCSSSCCCCEEEEETTTE
T ss_pred HHHHHHHHHHHHcCCcEEEEEecccccccHHHHHHHHhcCCCcccccccccccCcEEEEcceE
Confidence 357889999999999884431 1111 122333 3355554443 245777888764
No 105
>2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A*
Probab=43.66 E-value=17 Score=38.70 Aligned_cols=47 Identities=19% Similarity=0.339 Sum_probs=33.0
Q ss_pred ceEEecCCchhhHhhhhcCCCCCceEEEeccCCchhHHHHHHHHHh--hcCcEeee
Q 011017 441 KIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLC--QMGIKVSF 494 (495)
Q Consensus 441 ~~~vv~g~~l~~a~v~~~ip~~~~~v~l~g~~~~~k~~~a~a~~lc--~~~~~v~~ 494 (495)
-+.||+|+. ..+.+.++ +++.|.+||++ ++|++|+.... ++.++|.+
T Consensus 211 vv~vv~g~~---~~l~~~l~-~vd~V~FTGS~---~~G~~i~~~aa~a~~~k~v~l 259 (534)
T 2y53_A 211 ALSIICGSS---AGLLDQIR-SFDVVSFTGSA---DTAATLRAHPAFVQRGARLNV 259 (534)
T ss_dssp SEEECCSCC---TTSGGGCC-TTCEEEEESCH---HHHHHHHTSHHHHTTCCEEEE
T ss_pred eEEEEeCCh---HHHHhccc-ccCEEEEECCH---HHHHHHHHhhhhhcCCCcEEE
Confidence 356666643 12444444 57999999998 99999997653 77888864
No 106
>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Probab=41.30 E-value=14 Score=44.95 Aligned_cols=29 Identities=31% Similarity=0.350 Sum_probs=26.4
Q ss_pred ceEEEeccCCchh-HHHHHHHHHhhcCcEeee
Q 011017 464 AHVLLRGTVTANK-VANAVASSLCQMGIKVSF 494 (495)
Q Consensus 464 ~~v~l~g~~~~~k-~~~a~a~~lc~~~~~v~~ 494 (495)
|-|++||++ +- +|+|||..|.++|.+|++
T Consensus 477 KvALVTGAS--gGGIGrAIAr~LA~~GA~VVL 506 (1688)
T 2pff_A 477 KYVLITGAG--KGSIGAEVLQGLLQGGAKVVV 506 (1688)
T ss_dssp CCEEECSCS--SSSTHHHHHHHHHHHTCEEEE
T ss_pred CEEEEECCC--hHHHHHHHHHHHHHCcCEEEE
Confidence 579999999 56 999999999999999976
No 107
>3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A*
Probab=40.78 E-value=33 Score=36.55 Aligned_cols=51 Identities=14% Similarity=0.212 Sum_probs=36.4
Q ss_pred CcceEEecCCc-hhhHhhhhcCCCCCceEEEeccCCchhHHHHHHHHHhhcCcEeee
Q 011017 439 KLKIKVVDGSS-LAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVSF 494 (495)
Q Consensus 439 ~l~~~vv~g~~-l~~a~v~~~ip~~~~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~~ 494 (495)
+=-+.||.|+. -+.+.++. -++++.|.+||++ ++|+.|+....++..+|.+
T Consensus 227 ~gvvnvv~g~~~~~g~~L~~--~p~vd~V~FTGS~---~vG~~i~~~aa~~l~~v~l 278 (520)
T 3ed6_A 227 KGTINLILGAGSEVGDVMSG--HKEVDLVSFTGGI---ETGKHIMKNAANNVTNIAL 278 (520)
T ss_dssp TTSEEECCSCCTTHHHHHHH--CTTCSEEEEESCH---HHHHHHHHHHHTTTCEEEE
T ss_pred CCeEEEEeCCChHHHHHHHh--CCCcCEEEEECCH---HHHHHHHHHhhhcCCCEEE
Confidence 44466777743 22222222 3578999999998 9999999998888888865
No 108
>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*
Probab=40.69 E-value=18 Score=44.55 Aligned_cols=31 Identities=26% Similarity=0.321 Sum_probs=27.5
Q ss_pred CCceEEEeccCCchh-HHHHHHHHHhhcCcEeee
Q 011017 462 TTAHVLLRGTVTANK-VANAVASSLCQMGIKVSF 494 (495)
Q Consensus 462 ~~~~v~l~g~~~~~k-~~~a~a~~lc~~~~~v~~ 494 (495)
.-|-|++||++ += +|++||..|.++|.+|++
T Consensus 651 ~gKvaLVTGAS--gGgIG~aIAr~LA~~GA~VVl 682 (1878)
T 2uv9_A 651 QGKHALMTGAG--AGSIGAEVLQGLLSGGAKVIV 682 (1878)
T ss_dssp TTCEEEEESCC--TTSHHHHHHHHHHHTTCEEEE
T ss_pred CCCEEEEECCC--CcHHHHHHHHHHHHCCCEEEE
Confidence 34679999999 56 999999999999999976
No 109
>4h17_A Hydrolase, isochorismatase family; rossmann-like fold, structural genomics, joint center for ST genomics, JCSG; 1.60A {Pseudomonas putida KT2440}
Probab=40.17 E-value=1.2e+02 Score=27.75 Aligned_cols=97 Identities=11% Similarity=0.156 Sum_probs=54.9
Q ss_pred hhhhHHHHHHHHHHHHhcCCeEEEeccccccc-c---ccccceeeeccCCCCcceEEec--------CCchhhHhhhhcC
Q 011017 392 REAINSLIEEAILEADAKGVKVISLGLLNQGE-E---LNRNGEIYLERQPNKLKIKVVD--------GSSLAAAVVVNSL 459 (495)
Q Consensus 392 ~~~in~~ie~ai~~a~~~g~kv~sl~~ln~~~-~---ln~~g~~~~~~~p~~l~~~vv~--------g~~l~~a~v~~~i 459 (495)
.+.+=+-|.+.|..|.+.|+.|+-----.+.. . -+..|++.=.=.| .-.-.|++ |+.|.. .|++
T Consensus 45 ~~~~i~~i~~l~~~ar~~g~pVi~t~~~~~~~~~~~~~g~~g~~~~~l~~-~~~~~vi~K~~~saF~~t~L~~--~L~~- 120 (197)
T 4h17_A 45 MDEAVANIARLLDAARKSGRPIIHVRHLGTVGGRFDPQGPAGQFIPGLEP-LEGEIVIEKRMPNAFKNTKLHE--TLQE- 120 (197)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCEEEEEECCCTTSTTCTTSGGGSBCTTCCC-CTTCEEEEESSSSTTTTTCHHH--HHHH-
T ss_pred HHHHHHHHHHHHHHHHHCCCeEEEEEEecCCCCccccCCCCccCCHhhCC-CCCCEEEeCCcCCCcccchHHH--HHHh-
Confidence 34444555666667899999988653322110 0 1223333211112 11112332 222322 2332
Q ss_pred CCCCceEEEeccCCchhHHHHHHHHHhhcCcEeee
Q 011017 460 PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVSF 494 (495)
Q Consensus 460 p~~~~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~~ 494 (495)
.+.++|+++|-.+ +=-=.+.|+.+.++|.+|.+
T Consensus 121 -~gi~~lvi~G~~T-~~CV~~Ta~da~~~Gy~V~v 153 (197)
T 4h17_A 121 -LGHLDLIVCGFMS-HSSVSTTVRRAKDYGYRCTL 153 (197)
T ss_dssp -HTCSEEEEEEECT-TTHHHHHHHHHHHTTCEEEE
T ss_pred -cCCCEEEEEeeCc-CHHHHHHHHHHHHCCCEEEE
Confidence 3889999999987 55568889999999999986
No 110
>2ve5_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wme_A* 2wox_A* 3zqa_A* 2xdr_A*
Probab=40.01 E-value=32 Score=36.07 Aligned_cols=51 Identities=14% Similarity=0.129 Sum_probs=35.6
Q ss_pred CcceEEecCCch-hhHhhhhcCCCCCceEEEeccCCchhHHHHHHHHH-hhcCcEeee
Q 011017 439 KLKIKVVDGSSL-AAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSL-CQMGIKVSF 494 (495)
Q Consensus 439 ~l~~~vv~g~~l-~~a~v~~~ip~~~~~v~l~g~~~~~k~~~a~a~~l-c~~~~~v~~ 494 (495)
+=-+.||.|+.- +...++ + -++++.|++||.+ ++||.|+... .++..+|++
T Consensus 199 ~gvv~vv~g~~~~~~~~L~-~-~p~vd~v~fTGS~---~~g~~i~~~a~a~~l~~v~l 251 (490)
T 2ve5_A 199 DGVFNVLTGSGREVGQWLT-E-HPLIEKISFTGGT---STGKKVMASASSSSLKEVTM 251 (490)
T ss_dssp TTSEEECCSCTTTHHHHHH-H-CTTCCEEEEESCH---HHHHHHHHHHHHHHCCEEEE
T ss_pred cCeEEEEeCCChHHHHHHH-h-CCCcCEEEEeCCc---HHHHHHHHhchhccccceEE
Confidence 334677877432 222222 2 3568899999998 8999999988 787888764
No 111
>2w58_A DNAI, primosome component (helicase loader); ATP-binding, nucleotide-binding, hydrolase; HET: ADP; 2.50A {Geobacillus kaustophilus HTA426}
Probab=39.98 E-value=37 Score=30.09 Aligned_cols=38 Identities=18% Similarity=0.271 Sum_probs=29.3
Q ss_pred hhcCCCCC--ceEEEeccCCchh--HHHHHHHHHhhcCcEee
Q 011017 456 VNSLPKTT--AHVLLRGTVTANK--VANAVASSLCQMGIKVS 493 (495)
Q Consensus 456 ~~~ip~~~--~~v~l~g~~~~~k--~~~a~a~~lc~~~~~v~ 493 (495)
+++-+++. +-|+++|.+..+| +++++|..++++|.+|.
T Consensus 45 ~~~~~~~~~~~~~~l~G~~GtGKT~la~~i~~~~~~~~~~~~ 86 (202)
T 2w58_A 45 VAEYEPGKKMKGLYLHGSFGVGKTYLLAAIANELAKRNVSSL 86 (202)
T ss_dssp HHHCCSSCCCCEEEEECSTTSSHHHHHHHHHHHHHTTTCCEE
T ss_pred HHHhhhccCCCeEEEECCCCCCHHHHHHHHHHHHHHcCCeEE
Confidence 34444432 6899999877678 89999999999998875
No 112
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=39.67 E-value=19 Score=34.58 Aligned_cols=30 Identities=27% Similarity=0.331 Sum_probs=26.1
Q ss_pred CCceEEEeccCCchhHHHHHHHHHhhcCcEeee
Q 011017 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVSF 494 (495)
Q Consensus 462 ~~~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~~ 494 (495)
.-+.|.+.|+. .+|+++|..|.+.|++|.+
T Consensus 128 ~~~~v~iiGaG---~~g~aia~~L~~~g~~V~v 157 (275)
T 2hk9_A 128 KEKSILVLGAG---GASRAVIYALVKEGAKVFL 157 (275)
T ss_dssp GGSEEEEECCS---HHHHHHHHHHHHHTCEEEE
T ss_pred CCCEEEEECch---HHHHHHHHHHHHcCCEEEE
Confidence 44689999986 8999999999999998765
No 113
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=39.63 E-value=23 Score=33.72 Aligned_cols=28 Identities=21% Similarity=0.394 Sum_probs=24.3
Q ss_pred ceEEEeccCCchhHHHHHHHHHhhcCc-Eeee
Q 011017 464 AHVLLRGTVTANKVANAVASSLCQMGI-KVSF 494 (495)
Q Consensus 464 ~~v~l~g~~~~~k~~~a~a~~lc~~~~-~v~~ 494 (495)
+.|++.|+. .+|.++|.+|++.|+ ++.+
T Consensus 32 ~~VlVvG~G---g~G~~va~~La~~Gv~~i~l 60 (249)
T 1jw9_B 32 SRVLIVGLG---GLGCAASQYLASAGVGNLTL 60 (249)
T ss_dssp CEEEEECCS---HHHHHHHHHHHHHTCSEEEE
T ss_pred CeEEEEeeC---HHHHHHHHHHHHcCCCeEEE
Confidence 579999987 899999999999998 5543
No 114
>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*
Probab=39.45 E-value=19 Score=44.53 Aligned_cols=30 Identities=30% Similarity=0.338 Sum_probs=26.9
Q ss_pred CceEEEeccCCchh-HHHHHHHHHhhcCcEeee
Q 011017 463 TAHVLLRGTVTANK-VANAVASSLCQMGIKVSF 494 (495)
Q Consensus 463 ~~~v~l~g~~~~~k-~~~a~a~~lc~~~~~v~~ 494 (495)
-|-|++||++ += +|++||..|.++|.+|++
T Consensus 675 gKvaLVTGAS--sGgIG~aIA~~La~~GA~Vvl 705 (1887)
T 2uv8_A 675 DKYVLITGAG--KGSIGAEVLQGLLQGGAKVVV 705 (1887)
T ss_dssp TCEEEEESCC--SSSHHHHHHHHHHHTTCEEEE
T ss_pred CCEEEEECCC--CcHHHHHHHHHHHHCCCEEEE
Confidence 3679999999 45 999999999999999986
No 115
>3tg2_A Vibriobactin-specific isochorismatase; hydrolase; HET: ISC PGE; 1.10A {Vibrio cholerae} PDB: 3tb4_A*
Probab=39.19 E-value=1.4e+02 Score=28.02 Aligned_cols=32 Identities=9% Similarity=0.070 Sum_probs=28.1
Q ss_pred CCceEEEeccCCchhHHHHHHHHHhhcCcEeee
Q 011017 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVSF 494 (495)
Q Consensus 462 ~~~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~~ 494 (495)
|.++|+++|-.+ +=--.+.|+-+.++|++|.+
T Consensus 137 gi~~lii~G~~t-~~CV~~Ta~da~~~Gy~v~v 168 (223)
T 3tg2_A 137 GRDQLIITGVYA-HIGILSTALDAFMFDIQPFV 168 (223)
T ss_dssp TCCEEEEEEECT-TTHHHHHHHHHHHTTCEEEE
T ss_pred CcCceEEeeccc-ChHHHHHHHHHHHCCCEEEE
Confidence 899999999987 55558889999999999986
No 116
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=38.42 E-value=24 Score=37.62 Aligned_cols=30 Identities=23% Similarity=0.283 Sum_probs=26.7
Q ss_pred CCceEEEeccCCchhHHHHHHHHHhhcCcEeee
Q 011017 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVSF 494 (495)
Q Consensus 462 ~~~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~~ 494 (495)
.-|.|.+||+. .+|+++|..|.+.|.+|++
T Consensus 264 ~GKtVvVtGaG---gIG~aiA~~Laa~GA~Viv 293 (488)
T 3ond_A 264 AGKVAVVAGYG---DVGKGCAAALKQAGARVIV 293 (488)
T ss_dssp TTCEEEEECCS---HHHHHHHHHHHHTTCEEEE
T ss_pred cCCEEEEECCC---HHHHHHHHHHHHCCCEEEE
Confidence 34789999986 8999999999999999986
No 117
>3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A
Probab=38.24 E-value=27 Score=37.36 Aligned_cols=51 Identities=20% Similarity=0.176 Sum_probs=36.1
Q ss_pred CcceEEecCCch-hhHhhhhcCCCCCceEEEeccCCchhHHHHHHHHHhhc------CcEeee
Q 011017 439 KLKIKVVDGSSL-AAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQM------GIKVSF 494 (495)
Q Consensus 439 ~l~~~vv~g~~l-~~a~v~~~ip~~~~~v~l~g~~~~~k~~~a~a~~lc~~------~~~v~~ 494 (495)
+=-+.||.|+.- +.+.++. -++++.|.+||++ ++|+.|+....++ ..+|++
T Consensus 229 ~gvv~vv~g~~~~~g~~L~~--~p~v~~I~FTGS~---~~G~~i~~~aa~~~~~~~~lkpv~l 286 (538)
T 3qan_A 229 KGVINYVPGSGAEVGDYLVD--HPKTSLITFTGSK---DVGVRLYERAAVVRPGQNHLKRVIV 286 (538)
T ss_dssp TTSEEECCBCTTTTHHHHHH--CTTEEEEEEESCH---HHHHHHHHHHTSCCTTCCSCCEEEE
T ss_pred CCeEEEEecCCHHHHHHHHh--CCCcCEEEEECCH---HHHHHHHHHhhhccccccccccEEE
Confidence 334677877432 2222332 2578999999998 8999999988877 778764
No 118
>1vq2_A DCMP deaminase, deoxycytidylate deaminase; hydrolase; HET: DDN; 2.20A {Enterobacteria phage T4} SCOP: c.97.1.2
Probab=37.86 E-value=23 Score=32.65 Aligned_cols=65 Identities=23% Similarity=0.272 Sum_probs=46.1
Q ss_pred HHHHHHHhcCCeEEEeccccccccccccceeeeccCCCCcceEEecCCchhhHhhhhcCCCCCceEEEeccCCchhHHHH
Q 011017 401 EAILEADAKGVKVISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANA 480 (495)
Q Consensus 401 ~ai~~a~~~g~kv~sl~~ln~~~~ln~~g~~~~~~~p~~l~~~vv~g~~l~~a~v~~~ip~~~~~v~l~g~~~~~k~~~a 480 (495)
.||++|.+.|.. + .|++|||.-.| = .+-|.+|++. +.++|+..-.. .|.+..
T Consensus 108 ~AI~~a~~~g~~------------~-~g~tLYvT~eP-C---------~~Ca~aIi~a---GI~rVvy~~~~--~~~~~~ 159 (193)
T 1vq2_A 108 NAILFAAENGSS------------I-EGATMYVTLSP-C---------PDCAKAIAQS---GIKKLVYCETY--DKNKPG 159 (193)
T ss_dssp HHHHHHHHHTCC------------C-TTCEEEEEECC-C---------HHHHHHHHHH---TCCEEEEEECC--TTCCTT
T ss_pred HHHHHHHhcCCC------------c-CCeEEEEeCCC-c---------HHHHHHHHHh---CCCEEEEecCC--CCcchH
Confidence 578888887732 2 68999999999 2 4667777776 88898886333 455421
Q ss_pred HHHHHhhcCcEee
Q 011017 481 VASSLCQMGIKVS 493 (495)
Q Consensus 481 ~a~~lc~~~~~v~ 493 (495)
....|.+.||+|.
T Consensus 160 ~~~~l~~aGI~v~ 172 (193)
T 1vq2_A 160 WDDILRNAGIEVF 172 (193)
T ss_dssp TTHHHHHTTCEEE
T ss_pred HHHHHHHCCCEEE
Confidence 1357899999986
No 119
>1pq3_A Arginase II, mitochondrial precursor; biosynthetic protein, hydrolase; HET: S2C; 2.70A {Homo sapiens} SCOP: c.42.1.1
Probab=37.33 E-value=60 Score=31.79 Aligned_cols=97 Identities=13% Similarity=0.181 Sum_probs=65.9
Q ss_pred hhhhhHHHHHHHHHHHHhcCCeEEEecc-----------ccccccccccceeeeccCCCCcce------EEecCCchhhH
Q 011017 391 RREAINSLIEEAILEADAKGVKVISLGL-----------LNQGEELNRNGEIYLERQPNKLKI------KVVDGSSLAAA 453 (495)
Q Consensus 391 ~~~~in~~ie~ai~~a~~~g~kv~sl~~-----------ln~~~~ln~~g~~~~~~~p~~l~~------~vv~g~~l~~a 453 (495)
+-+..++.|++++.+.-+.|...|.||= +.+.. .+=|-+.++.|+ |++. .-.||+.+..|
T Consensus 68 ~~~~~~~~i~~~v~~~l~~g~~pi~lGGdHsit~~~~~~~~~~~--~~~~vI~~DAH~-Dl~~~~~~~sg~~hG~~~~~~ 144 (306)
T 1pq3_A 68 SVGLANQELAEVVSRAVSDGYSCVTLGGDHSLAIGTISGHARHC--PDLCVVWVDAHA-DINTPLTTSSGNLHGQPVSFL 144 (306)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTTC--TTCEEEEECSSC-CCCCTTTCSSCCGGGCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCeEEEEcCcccchHhHHHHHHhhC--CCeEEEEEecCc-ccCCCCCCCCCcccchHHHHH
Confidence 4677889999999999999999998872 22211 134688899999 8875 26788888888
Q ss_pred h-hhhc----CCC--------CCceEEEeccCCchhHHHHHHHHHhhcCcEee
Q 011017 454 V-VVNS----LPK--------TTAHVLLRGTVTANKVANAVASSLCQMGIKVS 493 (495)
Q Consensus 454 ~-v~~~----ip~--------~~~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~ 493 (495)
. ..+. ++. +.++++..|--+.+ ..-..++.+.|+++.
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iGiR~~~---~~e~~~~~~~g~~~~ 194 (306)
T 1pq3_A 145 LRELQDKVPQLPGFSWIKPCISSASIVYIGLRDVD---PPEHFILKNYDIQYF 194 (306)
T ss_dssp CTTTGGGSCCCTTCTTCCCCSCGGGEEEESCCCCC---HHHHHHHHHTTCEEE
T ss_pred HhccCcccccccccccccCcCCcccEEEEEcCCCC---HHHHHHHHHcCCeEE
Confidence 7 5543 111 45688888887532 223344556676653
No 120
>3ih5_A Electron transfer flavoprotein alpha-subunit; alpha-beta-alpha sandwich, structural genomics, PSI-2, protein structure initiative; 2.60A {Bacteroides thetaiotaomicron}
Probab=37.14 E-value=24 Score=33.30 Aligned_cols=84 Identities=13% Similarity=0.158 Sum_probs=47.7
Q ss_pred HHHHHHHHHHHhcCC--eEEEeccc--cccccccccc--eeeeccCCCCcceEEecCCchhhHhhhhcCCCC-CceEEEe
Q 011017 397 SLIEEAILEADAKGV--KVISLGLL--NQGEELNRNG--EIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKT-TAHVLLR 469 (495)
Q Consensus 397 ~~ie~ai~~a~~~g~--kv~sl~~l--n~~~~ln~~g--~~~~~~~p~~l~~~vv~g~~l~~a~v~~~ip~~-~~~v~l~ 469 (495)
++|++|..-||+.|. -++++|-- +..+++-..| +.|+-.+| .+. +.++...|-+|.++=++ --+++|+
T Consensus 23 ell~~A~~La~~~g~~v~av~~G~~~~~~~~~~~~~Gad~v~~v~~~-~~~----~~~~~~~a~~l~~~i~~~~p~~Vl~ 97 (217)
T 3ih5_A 23 ELLTKGRSLANELNCQLEAVVAGTGLKEIEKQILPYGVDKLHVFDAE-GLY----PYTSLPHTSILVNLFKEEQPQICLM 97 (217)
T ss_dssp HHHHHHHHHHHHHTCCEEEEEEESCCTTTHHHHGGGTCSEEEEEECG-GGS----SCCHHHHHHHHHHHHHHHCCSEEEE
T ss_pred HHHHHHHHHHHhcCCeEEEEEECCCHHHHHHHHHhcCCCEEEEecCc-ccc----cCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 467777777777785 55677752 1123333334 56666666 332 23444444444433222 2268999
Q ss_pred ccCCchhHHHHHHHHHhhc
Q 011017 470 GTVTANKVANAVASSLCQM 488 (495)
Q Consensus 470 g~~~~~k~~~a~a~~lc~~ 488 (495)
|++ ..|+.++-.|..|
T Consensus 98 g~t---~~G~~laprlAa~ 113 (217)
T 3ih5_A 98 GAT---VIGRDLGPRVSSA 113 (217)
T ss_dssp ECS---HHHHHHHHHHHHH
T ss_pred eCC---cchhhHHHHHHHH
Confidence 998 5688887776543
No 121
>2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A*
Probab=36.85 E-value=22 Score=37.40 Aligned_cols=51 Identities=8% Similarity=0.113 Sum_probs=36.0
Q ss_pred CcceEEec---CCch-hhHhhhhcCCCCCceEEEeccCCchhHHHHHHHHHhhcCcEeee
Q 011017 439 KLKIKVVD---GSSL-AAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVSF 494 (495)
Q Consensus 439 ~l~~~vv~---g~~l-~~a~v~~~ip~~~~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~~ 494 (495)
+=-+.||. |+.- +.+.++. -++++.|.+||.+ ++|+.|+....++..+|++
T Consensus 203 ~gvv~vv~~~~g~~~~~~~~L~~--~~~v~~V~fTGS~---~~g~~i~~~aa~~~~pv~l 257 (487)
T 2w8n_A 203 SGVYNVIPCSRKNAKEVGEAICT--DPLVSKISFTGST---TTGKILLHHAANSVKRVSM 257 (487)
T ss_dssp TTSEEECCCCHHHHHHHHHHHTT--CTTEEEEEEEECH---HHHHHHHHHHHTTTCEEEE
T ss_pred CCeEEEEecCCCCcHHHHHHHHh--CCCcCEEEEeCCH---HHHHHHHHHHhccCCcEEE
Confidence 33466777 6322 2222222 3478899999998 8999999999988888875
No 122
>2kjq_A DNAA-related protein; solution structure, NESG, structural genomics, PSI-2, protei structure initiative; NMR {Neisseria meningitidis serogroup B}
Probab=36.73 E-value=42 Score=29.11 Aligned_cols=45 Identities=13% Similarity=0.137 Sum_probs=33.3
Q ss_pred CCchhhHhhhhcCCCCCceEEEeccCCchh--HHHHHHHHHhhcCcEee
Q 011017 447 GSSLAAAVVVNSLPKTTAHVLLRGTVTANK--VANAVASSLCQMGIKVS 493 (495)
Q Consensus 447 g~~l~~a~v~~~ip~~~~~v~l~g~~~~~k--~~~a~a~~lc~~~~~v~ 493 (495)
|..-.+...+.++ .-+-++|.|.+..+| +.++++..++++|.++.
T Consensus 22 g~n~~~~~~l~~~--~g~~~~l~G~~G~GKTtL~~~i~~~~~~~g~~~~ 68 (149)
T 2kjq_A 22 TENAELVYVLRHK--HGQFIYVWGEEGAGKSHLLQAWVAQALEAGKNAA 68 (149)
T ss_dssp CCTHHHHHHCCCC--CCSEEEEESSSTTTTCHHHHHHHHHHHTTTCCEE
T ss_pred CccHHHHHHHHhc--CCCEEEEECCCCCCHHHHHHHHHHHHHhcCCcEE
Confidence 4444455566777 335689999887788 99999999999886554
No 123
>2fq1_A Isochorismatase; ENTB, NRPS, multi-domain, ACP, hydrolase; 2.30A {Escherichia coli}
Probab=36.55 E-value=2.4e+02 Score=26.98 Aligned_cols=33 Identities=12% Similarity=0.120 Sum_probs=27.7
Q ss_pred CCCceEEEeccCCchhHHHHHHHHHhhcCcEeee
Q 011017 461 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVSF 494 (495)
Q Consensus 461 ~~~~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~~ 494 (495)
.|.++|+++|-.+ +=-=.+.|..+.++|++|.+
T Consensus 143 ~gi~~lvi~Gv~T-~~CV~~Ta~dA~~~Gy~V~v 175 (287)
T 2fq1_A 143 SGRNQLIITGVYA-HIGCMTTATDAFMRDIKPFM 175 (287)
T ss_dssp TTCCEEEEEEECT-TTHHHHHHHHHHHTTCEEEE
T ss_pred CCCCEEEEEEeCc-chHHHHHHHHHHHCCCEEEE
Confidence 3899999999887 44447889999999999986
No 124
>3mcw_A Putative hydrolase; isochorismatase family, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.06A {Chromobacterium violaceum}
Probab=35.47 E-value=1.5e+02 Score=26.95 Aligned_cols=33 Identities=15% Similarity=0.243 Sum_probs=28.5
Q ss_pred CCCceEEEeccCCchhHHHHHHHHHhhcCcEeee
Q 011017 461 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVSF 494 (495)
Q Consensus 461 ~~~~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~~ 494 (495)
.+.++|+++|-.+ +=--.+.|+.+.++|.+|.+
T Consensus 111 ~gi~~lvi~G~~T-~~CV~~Ta~da~~~Gy~v~v 143 (198)
T 3mcw_A 111 NGWLELVVAGVST-SNSVEATVRMAGNLGFAVCL 143 (198)
T ss_dssp HTCCEEEEEEECT-TTHHHHHHHHHHHTTCEEEE
T ss_pred CCCCeEEEEEcCc-ChHHHHHHHHHHHCCCEEEE
Confidence 3899999999987 55568889999999999986
No 125
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=35.28 E-value=44 Score=32.75 Aligned_cols=31 Identities=13% Similarity=0.118 Sum_probs=27.0
Q ss_pred CCceEEEeccCCchhHHHHHHHHHhhc-CcEeee
Q 011017 462 TTAHVLLRGTVTANKVANAVASSLCQM-GIKVSF 494 (495)
Q Consensus 462 ~~~~v~l~g~~~~~k~~~a~a~~lc~~-~~~v~~ 494 (495)
.-+.|+.+|+. +-+|.+++..+.++ |.+|+.
T Consensus 170 ~g~~vlV~Gag--g~iG~~~~~~a~~~~Ga~Vi~ 201 (347)
T 1jvb_A 170 PTKTLLVVGAG--GGLGTMAVQIAKAVSGATIIG 201 (347)
T ss_dssp TTCEEEEETTT--SHHHHHHHHHHHHHTCCEEEE
T ss_pred CCCEEEEECCC--ccHHHHHHHHHHHcCCCeEEE
Confidence 44689999998 68999999999999 999874
No 126
>1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A*
Probab=35.13 E-value=40 Score=35.59 Aligned_cols=49 Identities=14% Similarity=0.053 Sum_probs=32.9
Q ss_pred CcceEEecCCchhhHhhhhcCCCCCceEEEeccCCchhHHHHHHHHHhhcCcEeee
Q 011017 439 KLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVSF 494 (495)
Q Consensus 439 ~l~~~vv~g~~l~~a~v~~~ip~~~~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~~ 494 (495)
+=-+.||.|.. .+..-|-+- ++++.|.+||++ ++|++|+.... ..+|++
T Consensus 214 ~gvv~vv~g~~-~~g~~L~~~-~~vd~I~FTGS~---~~G~~i~~~aa--l~~v~l 262 (501)
T 1uxt_A 214 PDAIALLNLPG-KEAEKIVAD-DRVAAVSFTGST---EVGERVVKVGG--VKQYVM 262 (501)
T ss_dssp TTSEEECCCCH-HHHHHHHTC-TTCCEEEEESCH---HHHHHHHHHHC--SSEEEE
T ss_pred cCeEEEEeCCc-HHHHHHHhC-CCcCEEEEeCcH---HHHHHHHHhcC--CCeEEE
Confidence 34477888876 332222222 478899999997 89999987654 666654
No 127
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=35.03 E-value=49 Score=32.03 Aligned_cols=32 Identities=25% Similarity=0.179 Sum_probs=27.7
Q ss_pred CCCceEEEeccCCchhHHHHHHHHHhhcCcEeee
Q 011017 461 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVSF 494 (495)
Q Consensus 461 ~~~~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~~ 494 (495)
+.-+.|+.+|++ +-+|++++..+.++|.+|++
T Consensus 144 ~~g~~vlV~Ga~--ggiG~~~~~~~~~~G~~V~~ 175 (333)
T 1v3u_A 144 KGGETVLVSAAA--GAVGSVVGQIAKLKGCKVVG 175 (333)
T ss_dssp CSSCEEEEESTT--BHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCEEEEecCC--CcHHHHHHHHHHHCCCEEEE
Confidence 344689999998 58999999999999999875
No 128
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=34.87 E-value=92 Score=30.69 Aligned_cols=81 Identities=15% Similarity=0.111 Sum_probs=52.6
Q ss_pred hcCCeEEEeccccccccccccceeeeccCC-CCcceEEecCCchhhH-------h-hhhcCCCCCceEEEeccCCchhHH
Q 011017 408 AKGVKVISLGLLNQGEELNRNGEIYLERQP-NKLKIKVVDGSSLAAA-------V-VVNSLPKTTAHVLLRGTVTANKVA 478 (495)
Q Consensus 408 ~~g~kv~sl~~ln~~~~ln~~g~~~~~~~p-~~l~~~vv~g~~l~~a-------~-v~~~ip~~~~~v~l~g~~~~~k~~ 478 (495)
-.|+|+++.=-=|..+.|-.--..++--.| ...-.=++||+.||+. + ...--+++.+.|.+.|+. ..|
T Consensus 61 ~~g~K~v~~~p~N~~~glp~~~~~~~L~d~~tG~p~a~~d~~~lt~~RTaa~s~laa~~la~~~~~~v~iIGaG---~~a 137 (322)
T 1omo_A 61 YAGLKWVNSHPGNPDKGLPTVMALMILNSPETGFPLAVMDATYTTSLRTGAAGGIAAKYLARKNSSVFGFIGCG---TQA 137 (322)
T ss_dssp EEEEEEEEECTTTGGGTSCSCCEEEEEECTTTCCEEEEEECHHHHHHHHHHHHHHHHHHHSCTTCCEEEEECCS---HHH
T ss_pred ceEEEEEecCCCccccCCCceeEEEEEEECCCCCEEEEEcCchHHHHHHHHHHHHHHHhccCCCCCEEEEEcCc---HHH
Confidence 479999997655655444322222222333 2555778999988741 1 111225688899999997 899
Q ss_pred HHHHHHHhh-cCcE
Q 011017 479 NAVASSLCQ-MGIK 491 (495)
Q Consensus 479 ~a~a~~lc~-~~~~ 491 (495)
++++.+|++ ++++
T Consensus 138 ~~~~~al~~~~~~~ 151 (322)
T 1omo_A 138 YFQLEALRRVFDIG 151 (322)
T ss_dssp HHHHHHHHHHSCCC
T ss_pred HHHHHHHHHhCCcc
Confidence 999999998 4443
No 129
>3oqp_A Putative isochorismatase; catalytic triad, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; 1.22A {Burkholderia xenovorans}
Probab=34.69 E-value=97 Score=28.78 Aligned_cols=33 Identities=15% Similarity=0.335 Sum_probs=28.9
Q ss_pred CCCceEEEeccCCchhHHHHHHHHHhhcCcEeee
Q 011017 461 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVSF 494 (495)
Q Consensus 461 ~~~~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~~ 494 (495)
.+.++|+++|-.+ +=--.+.|+-+.++|.+|.+
T Consensus 107 ~gi~~lvi~G~~T-~~CV~~Ta~dA~~~Gy~V~v 139 (211)
T 3oqp_A 107 RQIDTLTVTGYMT-HNCDASTINHAVHSGLAVEF 139 (211)
T ss_dssp TTCCEEEEEEECT-TTHHHHHHHHHHHTTCEEEE
T ss_pred CCCCEEEEEeecc-CHHHHHHHHHHHHCCCeEEE
Confidence 4899999999997 55568899999999999986
No 130
>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}
Probab=34.55 E-value=25 Score=39.44 Aligned_cols=30 Identities=23% Similarity=0.451 Sum_probs=25.6
Q ss_pred CCceEEEeccCCchhHHHHHHHHHh-hcCcE-ee
Q 011017 462 TTAHVLLRGTVTANKVANAVASSLC-QMGIK-VS 493 (495)
Q Consensus 462 ~~~~v~l~g~~~~~k~~~a~a~~lc-~~~~~-v~ 493 (495)
.-+.+++||++ +-+|+++|..|+ ++|.| |+
T Consensus 529 ~~~~~lItGg~--~GlG~aiA~~la~~~Ga~~vv 560 (795)
T 3slk_A 529 AAGTVLVTGGT--GALGAEVARHLVIERGVRNLV 560 (795)
T ss_dssp TTSEEEEETTT--SHHHHHHHHHHHHTSSCCEEE
T ss_pred cccceeeccCC--CCcHHHHHHHHHHHcCCcEEE
Confidence 34678999999 689999999999 89997 44
No 131
>3kl2_A Putative isochorismatase; structural genomics, unknown function, PSI-2, protein struct initiative; 2.30A {Streptomyces avermitilis} SCOP: c.33.1.0
Probab=33.72 E-value=1.4e+02 Score=27.90 Aligned_cols=33 Identities=21% Similarity=0.270 Sum_probs=28.3
Q ss_pred CCCceEEEeccCCchhHHHHHHHHHhhcCcEeee
Q 011017 461 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVSF 494 (495)
Q Consensus 461 ~~~~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~~ 494 (495)
.+.++|+++|-.+ +=--.+.|+-+.++|.+|.+
T Consensus 149 ~gi~~lii~G~~T-~~CV~~Ta~da~~~Gy~v~v 181 (226)
T 3kl2_A 149 KGVDTIVLGGFLT-NCCVESTMRTGYERGFRVIT 181 (226)
T ss_dssp HTCCEEEEEEECT-TTHHHHHHHHHHHTTCEEEE
T ss_pred CCCCcEEEeccCc-chHHHHHHHHHHHCCCEEEE
Confidence 3899999999987 55558889999999999986
No 132
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=33.64 E-value=31 Score=33.10 Aligned_cols=27 Identities=33% Similarity=0.412 Sum_probs=23.9
Q ss_pred eEEEeccCCchhHHHHHHHHHhhcCc-Eeee
Q 011017 465 HVLLRGTVTANKVANAVASSLCQMGI-KVSF 494 (495)
Q Consensus 465 ~v~l~g~~~~~k~~~a~a~~lc~~~~-~v~~ 494 (495)
.|.+.|+. ..|||++.+|+++|+ +|.+
T Consensus 110 ~vliiGaG---g~a~ai~~~L~~~G~~~I~v 137 (253)
T 3u62_A 110 PVVVVGAG---GAARAVIYALLQMGVKDIWV 137 (253)
T ss_dssp SEEEECCS---HHHHHHHHHHHHTTCCCEEE
T ss_pred eEEEECcH---HHHHHHHHHHHHcCCCEEEE
Confidence 78999986 899999999999998 6764
No 133
>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*
Probab=33.38 E-value=27 Score=45.21 Aligned_cols=30 Identities=20% Similarity=0.248 Sum_probs=26.9
Q ss_pred CceEEEeccCCchh-HHHHHHHHHhhcCcEeee
Q 011017 463 TAHVLLRGTVTANK-VANAVASSLCQMGIKVSF 494 (495)
Q Consensus 463 ~~~v~l~g~~~~~k-~~~a~a~~lc~~~~~v~~ 494 (495)
-|-+++||+++ = +|+|||..|.++|.+|++
T Consensus 2136 gKvaLVTGAs~--GsIG~AiA~~La~~GA~Vvi 2166 (3089)
T 3zen_D 2136 DEVAVVTGASK--GSIAASVVGQLLDGGATVIA 2166 (3089)
T ss_dssp CCEEEEESCCT--TSHHHHHHHHHHHTTCEEEE
T ss_pred CCEEEEeCCCh--hHHHHHHHHHHHHCCCEEEE
Confidence 46799999994 6 999999999999999986
No 134
>1jzt_A Hypothetical 27.5 kDa protein in SPX19-GCR2 inter region; yeast hypothetical protein, structural genomics, selenomethi PSI; 1.94A {Saccharomyces cerevisiae} SCOP: c.104.1.1
Probab=33.17 E-value=37 Score=32.67 Aligned_cols=31 Identities=13% Similarity=0.068 Sum_probs=21.2
Q ss_pred ceEEEeccCCchhHHHHHHHHHhhcCcEeee
Q 011017 464 AHVLLRGTVTANKVANAVASSLCQMGIKVSF 494 (495)
Q Consensus 464 ~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~~ 494 (495)
+=++|+|..+-.==|.++|..|+++|++|.+
T Consensus 60 ~v~VlcG~GNNGGDGlv~AR~L~~~G~~V~v 90 (246)
T 1jzt_A 60 HVFVIAGPGNNGGDGLVCARHLKLFGYNPVV 90 (246)
T ss_dssp EEEEEECSSHHHHHHHHHHHHHHHTTCCEEE
T ss_pred eEEEEECCCCCHHHHHHHHHHHHHCCCeEEE
Confidence 4457777654234567888888888888764
No 135
>3eef_A N-carbamoylsarcosine amidase related protein; structural genomics, protein structure initiative, midwest center for structural genomics; 2.35A {Thermoplasma acidophilum}
Probab=32.55 E-value=2.6e+02 Score=24.73 Aligned_cols=96 Identities=15% Similarity=0.172 Sum_probs=54.8
Q ss_pred hhhHHHHHHHHHHHHhcCCeEEEeccc-c-ccccc---------c-ccceeeeccCCCCcceEEec--------CCchhh
Q 011017 393 EAINSLIEEAILEADAKGVKVISLGLL-N-QGEEL---------N-RNGEIYLERQPNKLKIKVVD--------GSSLAA 452 (495)
Q Consensus 393 ~~in~~ie~ai~~a~~~g~kv~sl~~l-n-~~~~l---------n-~~g~~~~~~~p~~l~~~vv~--------g~~l~~ 452 (495)
+.+=.-|.+.+..|.+.|+.|+----- + +..++ + .|+++.=.=.| .-.-.|++ |+.|.
T Consensus 25 ~~~i~~i~~l~~~ar~~g~pVi~t~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~l~~-~~~~~vi~K~~~saF~~t~L~- 102 (182)
T 3eef_A 25 MKTVGPARKVIETFRRSGLPVVYVNDSHYPDDPEIRIWGRHSMKGDDGSEVIDEIRP-SAGDYVLEKHAYSGFYGTNLD- 102 (182)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEEEECBCTTSTTHHHHCSCSBTTSGGGSBCGGGCC-CTTCEEEEESSSSTTTTSSHH-
T ss_pred HHHHHHHHHHHHHHHHcCCeEEEEecccCCCChhhhhcchhhcCCCchhhhhhhhCC-CCCcEEEeecccCCCCCCCHH-
Confidence 344444666667789999998866421 1 11111 1 12233222112 11112332 33332
Q ss_pred HhhhhcCCCCCceEEEeccCCchhHHHHHHHHHhhcCcEeee
Q 011017 453 AVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVSF 494 (495)
Q Consensus 453 a~v~~~ip~~~~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~~ 494 (495)
..|++ .+.++|+++|-.+ +=-=.+.|+-+.++|.+|.+
T Consensus 103 -~~L~~--~gi~~lii~G~~T-~~CV~~Ta~da~~~Gy~V~v 140 (182)
T 3eef_A 103 -MILRA--NGIDTVVLIGLDA-DICVRHTAADALYRNYRIIV 140 (182)
T ss_dssp -HHHHH--TTCCEEEEEEECT-TTHHHHHHHHHHHTTCEEEE
T ss_pred -HHHHh--cCCCeEEEEEecc-CHHHHHHHHHHHHCCCEEEE
Confidence 23444 3899999999987 45558889999999999986
No 136
>2a67_A Isochorismatase family protein; structural genomics, PSI, protein structure initiative, MIDW center for structural genomics, MCSG; 2.00A {Enterococcus faecalis}
Probab=32.20 E-value=1.5e+02 Score=26.10 Aligned_cols=95 Identities=9% Similarity=0.111 Sum_probs=54.0
Q ss_pred hhhhHHHHHHHHHHHHhcCCeEEEeccccccccc--cccc-eeeeccCCCCcceEEe--------cCCchhhHhhhhcCC
Q 011017 392 REAINSLIEEAILEADAKGVKVISLGLLNQGEEL--NRNG-EIYLERQPNKLKIKVV--------DGSSLAAAVVVNSLP 460 (495)
Q Consensus 392 ~~~in~~ie~ai~~a~~~g~kv~sl~~ln~~~~l--n~~g-~~~~~~~p~~l~~~vv--------~g~~l~~a~v~~~ip 460 (495)
.+.+=+-|.+.|..|.+.|+.|+-----. ..+ +..| ++.=.=.| .-.-.|+ .|+.|. ..|++
T Consensus 26 ~~~~~~~i~~li~~ar~~g~pVi~t~~~~--~~~~~g~~g~~i~~~l~~-~~~~~vi~K~~~saF~~t~L~--~~L~~-- 98 (167)
T 2a67_A 26 LPAVLDKVNQRIAVYRQHHAPIIFVQHEE--TELPFGSDSWQLFEKLDT-QPTDFFIRKTHANAFYQTNLN--DLLTE-- 98 (167)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCEEEEEECB--TTBCTTSTTTSBCTTSCC-CTTSEEEEESSSSTTTTSSHH--HHHHH--
T ss_pred HHHHHHHHHHHHHHHHHCCCeEEEEEeCC--CCccCCCCcceechhhCC-CCCCEEEECCCCCCCCCCcHH--HHHHH--
Confidence 34444556666667899999988543211 011 1111 22110011 0001122 233333 34444
Q ss_pred CCCceEEEeccCCchhHHHHHHHHHhhcCcEeee
Q 011017 461 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVSF 494 (495)
Q Consensus 461 ~~~~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~~ 494 (495)
.+.++|+++|-.+ +=-=.+.|+.+.++|.+|.+
T Consensus 99 ~gi~~lvv~G~~T-~~CV~~Ta~da~~~Gy~v~v 131 (167)
T 2a67_A 99 QAVQTLEIAGVQT-EFCVDTTIRMAHGLGYTCLM 131 (167)
T ss_dssp TTCCEEEEEEECT-TTHHHHHHHHHHHHTCEEEE
T ss_pred CCCCEEEEEeccc-ChHHHHHHHHHHHCCCEEEE
Confidence 4889999999987 55568889999999999986
No 137
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=32.20 E-value=1.2e+02 Score=29.69 Aligned_cols=77 Identities=18% Similarity=0.124 Sum_probs=49.4
Q ss_pred hcCCeEEEeccccccccccccceeeeccCCCCcceEEecCCchhhHhh-----------h-hcC-CCCCceEEEeccCCc
Q 011017 408 AKGVKVISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVV-----------V-NSL-PKTTAHVLLRGTVTA 474 (495)
Q Consensus 408 ~~g~kv~sl~~ln~~~~ln~~g~~~~~~~p~~l~~~vv~g~~l~~a~v-----------~-~~i-p~~~~~v~l~g~~~~ 474 (495)
+-|=+|+.++ .+|+=.=|+.-.+ +.=+|+=++-+...|+. + +.. .+.-+.|+.+|++
T Consensus 100 ~vGDrV~~~~-------~~G~~aey~~v~~-~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Gas-- 169 (342)
T 4eye_A 100 KPGDRVMAFN-------FIGGYAERVAVAP-SNILPTPPQLDDAEAVALIANYHTMYFAYARRGQLRAGETVLVLGAA-- 169 (342)
T ss_dssp CTTCEEEEEC-------SSCCSBSEEEECG-GGEEECCTTSCHHHHHHHTTHHHHHHHHHHTTSCCCTTCEEEESSTT--
T ss_pred CCCCEEEEec-------CCCcceEEEEEcH-HHeEECCCCCCHHHHHHhhhHHHHHHHHHHHhcCCCCCCEEEEECCC--
Confidence 3566666542 1233334555444 55566667777654421 2 222 3344679999998
Q ss_pred hhHHHHHHHHHhhcCcEeee
Q 011017 475 NKVANAVASSLCQMGIKVSF 494 (495)
Q Consensus 475 ~k~~~a~a~~lc~~~~~v~~ 494 (495)
+-+|.+.+..+..+|.+|+.
T Consensus 170 g~iG~~~~~~a~~~Ga~Vi~ 189 (342)
T 4eye_A 170 GGIGTAAIQIAKGMGAKVIA 189 (342)
T ss_dssp SHHHHHHHHHHHHTTCEEEE
T ss_pred CHHHHHHHHHHHHcCCEEEE
Confidence 58999999999999999875
No 138
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=32.19 E-value=56 Score=31.94 Aligned_cols=31 Identities=16% Similarity=0.159 Sum_probs=26.8
Q ss_pred CCceEEEeccCCchhHHHHHHHHHhhcCcEeee
Q 011017 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVSF 494 (495)
Q Consensus 462 ~~~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~~ 494 (495)
.-+.|+.+|++ +-+|++++..+.++|.+|+.
T Consensus 169 ~g~~vlV~Ga~--ggiG~~~~~~a~~~Ga~V~~ 199 (347)
T 2hcy_A 169 AGHWVAISGAA--GGLGSLAVQYAKAMGYRVLG 199 (347)
T ss_dssp TTCEEEEETTT--SHHHHHHHHHHHHTTCEEEE
T ss_pred CCCEEEEECCC--chHHHHHHHHHHHCCCcEEE
Confidence 34679999998 58999999999999999875
No 139
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=32.00 E-value=39 Score=33.03 Aligned_cols=29 Identities=31% Similarity=0.392 Sum_probs=25.8
Q ss_pred CceEEEeccCCchhHHHHHHHHHhhcCcEeee
Q 011017 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVSF 494 (495)
Q Consensus 463 ~~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~~ 494 (495)
-+.|++.|+. -.|||+|.+|.+.|.+|.+
T Consensus 118 ~k~vlvlGaG---Gaaraia~~L~~~G~~v~V 146 (269)
T 3phh_A 118 YQNALILGAG---GSAKALACELKKQGLQVSV 146 (269)
T ss_dssp CCEEEEECCS---HHHHHHHHHHHHTTCEEEE
T ss_pred CCEEEEECCC---HHHHHHHHHHHHCCCEEEE
Confidence 6789999986 7899999999999988765
No 140
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=31.68 E-value=51 Score=31.91 Aligned_cols=32 Identities=16% Similarity=0.145 Sum_probs=27.3
Q ss_pred CCCceEEEeccCCchhHHHHHHHHHhhcCcEeee
Q 011017 461 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVSF 494 (495)
Q Consensus 461 ~~~~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~~ 494 (495)
+.-+.|+.+|++ +-+|.+.+..+..+|.+|+.
T Consensus 139 ~~g~~VlV~Ga~--g~iG~~~~~~a~~~Ga~Vi~ 170 (325)
T 3jyn_A 139 KPGEIILFHAAA--GGVGSLACQWAKALGAKLIG 170 (325)
T ss_dssp CTTCEEEESSTT--SHHHHHHHHHHHHHTCEEEE
T ss_pred CCCCEEEEEcCC--cHHHHHHHHHHHHCCCEEEE
Confidence 344679999988 58999999999999999875
No 141
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=31.64 E-value=51 Score=32.17 Aligned_cols=31 Identities=19% Similarity=0.114 Sum_probs=26.8
Q ss_pred CCceEEEeccCCchhHHHHHHHHHhhcCcEeee
Q 011017 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVSF 494 (495)
Q Consensus 462 ~~~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~~ 494 (495)
.-+.|+.+|++ +-+|.+++..+.++|.+|+.
T Consensus 166 ~g~~vlV~Gas--g~iG~~~~~~a~~~G~~Vi~ 196 (343)
T 2eih_A 166 PGDDVLVMAAG--SGVSVAAIQIAKLFGARVIA 196 (343)
T ss_dssp TTCEEEECSTT--STTHHHHHHHHHHTTCEEEE
T ss_pred CCCEEEEECCC--chHHHHHHHHHHHCCCEEEE
Confidence 34679999998 58999999999999999864
No 142
>3txy_A Isochorismatase family protein family; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.70A {Burkholderia thailandensis} SCOP: c.33.1.0
Probab=31.50 E-value=1e+02 Score=28.03 Aligned_cols=33 Identities=18% Similarity=0.234 Sum_probs=28.4
Q ss_pred CCCceEEEeccCCchhHHHHHHHHHhhcCcEeee
Q 011017 461 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVSF 494 (495)
Q Consensus 461 ~~~~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~~ 494 (495)
.+.++|+++|-.+ +=--.+.|+.+.++|.+|.+
T Consensus 124 ~gi~~lvi~G~~t-~~CV~~Ta~~a~~~G~~v~v 156 (199)
T 3txy_A 124 RGITDIVLTGIAT-NIGVESTAREAYENNYNVVV 156 (199)
T ss_dssp TTCCEEEEEEECT-TTHHHHHHHHHHHTTCEEEE
T ss_pred CCCCEEEEEeecc-CHHHHHHHHHHHHCCCEEEE
Confidence 3899999999987 55568889999999999986
No 143
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=31.44 E-value=49 Score=32.11 Aligned_cols=31 Identities=13% Similarity=0.131 Sum_probs=26.9
Q ss_pred CCceEEEeccCCchhHHHHHHHHHhhcCcEeee
Q 011017 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVSF 494 (495)
Q Consensus 462 ~~~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~~ 494 (495)
.-+.|+.+|++ +-+|.+++..+.++|.+|+.
T Consensus 145 ~g~~vlV~Ga~--ggiG~~~~~~a~~~G~~Vi~ 175 (333)
T 1wly_A 145 PGDYVLIHAAA--GGMGHIMVPWARHLGATVIG 175 (333)
T ss_dssp TTCEEEETTTT--STTHHHHHHHHHHTTCEEEE
T ss_pred CCCEEEEECCc--cHHHHHHHHHHHHCCCEEEE
Confidence 34679999998 58999999999999999874
No 144
>3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A*
Probab=31.32 E-value=39 Score=35.73 Aligned_cols=49 Identities=16% Similarity=0.168 Sum_probs=31.7
Q ss_pred CcceEEecCCchh-hHhhhhcCCCCCceEEEeccCCchhHHHHHHHHHhhcCcEeee
Q 011017 439 KLKIKVVDGSSLA-AAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVSF 494 (495)
Q Consensus 439 ~l~~~vv~g~~l~-~a~v~~~ip~~~~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~~ 494 (495)
+=-+.||.|+.-. ...++ +- ++++.|++||++ ++|++|+.... ..+|++
T Consensus 209 ~gvv~vv~g~~~~~g~~L~-~~-p~vd~I~FTGS~---~~G~~i~~~aa--l~~v~l 258 (505)
T 3prl_A 209 EGIIQVVTGRGSVIGDHLV-EH-PGIDMITFTGGT---TTGERISEKAK--MIPVVL 258 (505)
T ss_dssp TTSEEECCCCHHHHHHHHH-TC-TTCCEEEEESCH---HHHHHHHHHCC--SSCEEE
T ss_pred cCeEEEEeCCCHHHHHHHH-hC-CCCCEEEEeCCH---HHHHHHHHHcc--CCcEEE
Confidence 3346778885332 22232 22 468899999998 89999987655 555543
No 145
>1win_A Flotillin 2; BAND 7 domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, cell adhesion; NMR {Mus musculus} SCOP: d.43.2.1
Probab=31.26 E-value=32 Score=29.97 Aligned_cols=30 Identities=17% Similarity=0.452 Sum_probs=26.1
Q ss_pred hhhhhHHHHHHHHH-HHHhcCCeEEEecccc
Q 011017 391 RREAINSLIEEAIL-EADAKGVKVISLGLLN 420 (495)
Q Consensus 391 ~~~~in~~ie~ai~-~a~~~g~kv~sl~~ln 420 (495)
+++.||+.|.+.+. ++++.|++|.+...-+
T Consensus 91 ~R~~i~~~v~~~~~~~~~~~Gi~V~~v~Ikd 121 (143)
T 1win_A 91 DRDQFAKLVREVAAPDVGRMGIEILSFTIKD 121 (143)
T ss_dssp THHHHHHHHHHHHHHHHTTTTEEEEEEECCC
T ss_pred HHHHHHHHHHHHHHHHHHhCCCEEEEEEEEe
Confidence 68999999999988 6799999999987644
No 146
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=31.22 E-value=1e+02 Score=30.37 Aligned_cols=31 Identities=23% Similarity=0.233 Sum_probs=27.1
Q ss_pred CCceEEEeccCCchhHHHHHHHHHhhcCcEeee
Q 011017 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVSF 494 (495)
Q Consensus 462 ~~~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~~ 494 (495)
.-+.|+.+|++ +-+|.+++..+.++|.+|+.
T Consensus 170 ~g~~vlV~Gas--ggiG~~~~~~a~~~Ga~Vi~ 200 (351)
T 1yb5_A 170 AGESVLVHGAS--GGVGLAACQIARAYGLKILG 200 (351)
T ss_dssp TTCEEEEETCS--SHHHHHHHHHHHHTTCEEEE
T ss_pred CcCEEEEECCC--ChHHHHHHHHHHHCCCEEEE
Confidence 44689999998 58999999999999999874
No 147
>1yac_A Ycacgp, YCAC gene product; unknown bacterial hydrolase, three layer alpha-beta-alpha SA topology, ENTB homolog, cshase homolog; 1.80A {Escherichia coli} SCOP: c.33.1.3
Probab=31.19 E-value=86 Score=28.88 Aligned_cols=93 Identities=18% Similarity=0.170 Sum_probs=53.2
Q ss_pred hhhHHHHHHHHHHHHhcCCeEEEeccccccccccccceeeec---cCCCCcce-E-----EecCCchhhHhhhhcCCCCC
Q 011017 393 EAINSLIEEAILEADAKGVKVISLGLLNQGEELNRNGEIYLE---RQPNKLKI-K-----VVDGSSLAAAVVVNSLPKTT 463 (495)
Q Consensus 393 ~~in~~ie~ai~~a~~~g~kv~sl~~ln~~~~ln~~g~~~~~---~~p~~l~~-~-----vv~g~~l~~a~v~~~ip~~~ 463 (495)
+.+=+-|.+.+..|.+.|+.|+----..++ .+|++.-+ ..|++.-+ | -..|+.|. ..|.+ .|.
T Consensus 34 ~~~i~~i~~l~~~ar~~g~pVi~t~~~~~~----~~~~~~~~l~~~~~~~~vi~K~~~~saF~~t~L~--~~L~~--~gi 105 (208)
T 1yac_A 34 DKFKNNVLALGDLAKYFNLPTILTTSAETG----PNGPLVPELKAQFPDAPYIARPGNINAWDNEDFV--KAVKA--TGK 105 (208)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEEEESTTT----TTCCBCHHHHHHCTTSCEEEESSCSSGGGSHHHH--HHHHH--TTC
T ss_pred HHHHHHHHHHHHHHHHcCCcEEEEEecCCC----CCCcccHHHHhhCCCCeEEeeCCccCCCCCchHH--HHHHh--cCC
Confidence 344445566666788999998865422111 13443321 12311100 0 01222222 23443 389
Q ss_pred ceEEEeccCCchhHHHHHHHHHhhcCcEeee
Q 011017 464 AHVLLRGTVTANKVANAVASSLCQMGIKVSF 494 (495)
Q Consensus 464 ~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~~ 494 (495)
++|+++|-.+ +=-=.+.|+-+.++|.+|.+
T Consensus 106 ~~lvi~Gv~T-~~CV~~Ta~dA~~~Gy~V~v 135 (208)
T 1yac_A 106 KQLIIAGVVT-EVCVAFPALSAIEEGFDVFV 135 (208)
T ss_dssp SEEEEEEBSC-CCCCHHHHHHHHHTTCEEEE
T ss_pred CEEEEEEecc-chhHHHHHHHHHHCCCEEEE
Confidence 9999999886 44447889999999999986
No 148
>2o8n_A APOA-I binding protein; rossmann fold, protein binding; 2.00A {Mus musculus} PDB: 2dg2_A
Probab=31.05 E-value=40 Score=32.95 Aligned_cols=31 Identities=13% Similarity=0.128 Sum_probs=21.1
Q ss_pred ceEEEeccCCchhHHHHHHHHHhhcCcEeee
Q 011017 464 AHVLLRGTVTANKVANAVASSLCQMGIKVSF 494 (495)
Q Consensus 464 ~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~~ 494 (495)
+=++|+|..+-.==|.++|..|.++|++|.+
T Consensus 81 ~VlVlcG~GNNGGDGlv~AR~L~~~G~~V~V 111 (265)
T 2o8n_A 81 TVLVICGPGNNGGDGLVCARHLKLFGYQPTI 111 (265)
T ss_dssp EEEEEECSSHHHHHHHHHHHHHHHTTCEEEE
T ss_pred eEEEEECCCCCHHHHHHHHHHHHHCCCcEEE
Confidence 4456777653234567888888888888764
No 149
>2gpj_A Siderophore-interacting protein; structural genomics, joint for structural genomics, JCSG; HET: FAD; 2.20A {Shewanella putrefaciens}
Probab=30.21 E-value=84 Score=29.45 Aligned_cols=72 Identities=8% Similarity=0.039 Sum_probs=42.5
Q ss_pred CCeE-EEeccccccccccccceeeeccCCCCcceEEec--CCc---hhhHhhhhcC--CCCCceEEEeccCCchhHHHHH
Q 011017 410 GVKV-ISLGLLNQGEELNRNGEIYLERQPNKLKIKVVD--GSS---LAAAVVVNSL--PKTTAHVLLRGTVTANKVANAV 481 (495)
Q Consensus 410 g~kv-~sl~~ln~~~~ln~~g~~~~~~~p~~l~~~vv~--g~~---l~~a~v~~~i--p~~~~~v~l~g~~~~~k~~~a~ 481 (495)
+.++ +-++.-|+.+. ...+..| +++++.+. |+. -..+-.+.++ |.+..+|+++|-. .+-+|+
T Consensus 137 ~~~~~~~~~~~~~~d~------~~l~~~~-~~~v~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~vy~CGP~---~m~~av 206 (252)
T 2gpj_A 137 NAVGYAVIEVLSEADI------QPLVHPE-HVELHWVINPEADPEGRPLVERIAQLPWLAGEPAVWIACEF---NSMRAL 206 (252)
T ss_dssp TCEEEEEEEESSGGGC------CCCCCCT-EEEEEEEECSSCCTTCHHHHHHHTTSCCCSSCEEEEEEEEH---HHHHHH
T ss_pred CCcEEEEEEECCHHHh------hcccCCC-CcEEEEEeCCCCCcccHHHHHHHHhccCCCCCcEEEEEcCH---HHHHHH
Confidence 3444 44565554432 2334456 77887663 221 1122234443 4556689999997 677899
Q ss_pred HHHHh-hcCcE
Q 011017 482 ASSLC-QMGIK 491 (495)
Q Consensus 482 a~~lc-~~~~~ 491 (495)
..+|. ++|+.
T Consensus 207 ~~~l~~~~G~~ 217 (252)
T 2gpj_A 207 RRHFKQAHALP 217 (252)
T ss_dssp HHHHHHHCCCC
T ss_pred HHHHHHhcCCC
Confidence 98887 67863
No 150
>2wme_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wox_A* 3zqa_A* 2xdr_A*
Probab=29.53 E-value=49 Score=34.96 Aligned_cols=53 Identities=15% Similarity=0.197 Sum_probs=33.9
Q ss_pred CCCcceEEecCCchhhHhhhhcCCCCCceEEEeccCCchhHHHHHHHHHhhcC-cEeee
Q 011017 437 PNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMG-IKVSF 494 (495)
Q Consensus 437 p~~l~~~vv~g~~l~~a~v~~~ip~~~~~v~l~g~~~~~k~~~a~a~~lc~~~-~~v~~ 494 (495)
| +==+.||.|+.-.++..|-+ -++++.|.+||++ .+|+.|....|.++ .+|.+
T Consensus 198 P-~gv~~vv~g~g~~~g~~L~~-~p~v~~I~FTGS~---~~G~~i~~~~a~~~lk~v~l 251 (490)
T 2wme_A 198 P-DGVFNVLTGSGREVGQWLTE-HPLIEKISFTGGT---STGKKVMASASSSSLKEVTM 251 (490)
T ss_dssp C-TTSEEECCSCTTTHHHHHHH-CTTCCEEEEESCH---HHHHHHHHHHHHHHCCEEEE
T ss_pred C-CCcEEEEeCChHHHHHHHHh-CCCCCEEEEECCh---HHHHHHHHhhhccCCceEEE
Confidence 5 33466788764333222323 2468999999998 89988876666654 46653
No 151
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=29.42 E-value=51 Score=34.71 Aligned_cols=34 Identities=21% Similarity=0.181 Sum_probs=29.8
Q ss_pred cCCCCCceEEEeccCCchhHHHHHHHHHhhcCcEeee
Q 011017 458 SLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVSF 494 (495)
Q Consensus 458 ~ip~~~~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~~ 494 (495)
.-|...+.|-+.|+. .+|.+||..|+++|++|.+
T Consensus 49 ~~~~~i~kVaVIGaG---~MG~~IA~~la~aG~~V~l 82 (460)
T 3k6j_A 49 SEAYDVNSVAIIGGG---TMGKAMAICFGLAGIETFL 82 (460)
T ss_dssp CCCCCCCEEEEECCS---HHHHHHHHHHHHTTCEEEE
T ss_pred CCcccCCEEEEECCC---HHHHHHHHHHHHCCCeEEE
Confidence 345677899999997 8999999999999999986
No 152
>3m1r_A Formimidoylglutamase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: CAC; 2.20A {Bacillus subtilis}
Probab=29.13 E-value=62 Score=32.18 Aligned_cols=99 Identities=9% Similarity=0.063 Sum_probs=61.5
Q ss_pred chhhhhhHHHHHHHHHHHHhcCC--eEEEec-----------cccccccccccceeeeccCCCCcce----EEecCCchh
Q 011017 389 PWRREAINSLIEEAILEADAKGV--KVISLG-----------LLNQGEELNRNGEIYLERQPNKLKI----KVVDGSSLA 451 (495)
Q Consensus 389 ~~~~~~in~~ie~ai~~a~~~g~--kv~sl~-----------~ln~~~~ln~~g~~~~~~~p~~l~~----~vv~g~~l~ 451 (495)
+...+...+.|++++.+.-+.|. ..|.|| ++.+.. .+=|-+.++.|+ |++- +.-||+-+.
T Consensus 97 ~~~~~~~~~~i~~~v~~~l~~g~~~~pi~lGGdHsit~~~~~al~~~~--~~~~vI~~DAH~-Dl~~~~~~~~~hG~~~~ 173 (322)
T 3m1r_A 97 VTDIVKSHHHIFQTMHALLSDHPDWVPLILGGDNSISYSTIKAIAQTK--GTTAVIQFDAHH-DVRNTEDGGPTNGTPFR 173 (322)
T ss_dssp SSCHHHHHHHHHHHHHHHHHHCTTEEEEEEESCTTHHHHHHHHHHHHH--CSEEEEEECSSC-CCCCSSCC--CTTCHHH
T ss_pred CCCHHHHHHHHHHHHHHHHhcCCCceeEEeCCCccccHHHHHHHHHhC--CCeEEEEccCCc-cccCCCCCCCCCccHHH
Confidence 44667788999999999999999 999887 233311 133578889999 8876 344555554
Q ss_pred hHhhhhcCCCCCceEEEeccCCchhHHHHHHHHHhhcCcEee
Q 011017 452 AAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVS 493 (495)
Q Consensus 452 ~a~v~~~ip~~~~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~ 493 (495)
-|. ++=+-+.++++..|--+. .....-..++-+.|+++.
T Consensus 174 ~~~--~~~~~~~~~~~~iGiR~~-~~~~~e~~~~~~~g~~~~ 212 (322)
T 3m1r_A 174 RLL--DEEIIEGQHLIQLGIREF-SNSQAYEAYAKKHNVNIH 212 (322)
T ss_dssp HHH--HTTSSCGGGEEEEEECTT-SSCHHHHHHHHHTTCEEE
T ss_pred HHH--hccCCCCceEEEEeeCCC-CCCHHHHHHHHHCCCEEE
Confidence 443 221224466777776631 122344455566677664
No 153
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=29.10 E-value=61 Score=31.29 Aligned_cols=31 Identities=13% Similarity=0.094 Sum_probs=27.0
Q ss_pred CCceEEEeccCCchhHHHHHHHHHhhcCcEeee
Q 011017 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVSF 494 (495)
Q Consensus 462 ~~~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~~ 494 (495)
.-+.|+.+|++ +-+|.+++..+.++|.+|+.
T Consensus 140 ~g~~vlV~Ga~--ggiG~~~~~~a~~~G~~V~~ 170 (327)
T 1qor_A 140 PDEQFLFHAAA--GGVGLIACQWAKALGAKLIG 170 (327)
T ss_dssp TTCEEEESSTT--BHHHHHHHHHHHHHTCEEEE
T ss_pred CCCEEEEECCC--CHHHHHHHHHHHHcCCEEEE
Confidence 34689999988 58999999999999999874
No 154
>2aeb_A Arginase 1; hydrolase, binuclear manganese cluster, boronic acid inhibit perfectly twinned crystal; HET: ABH; 1.29A {Homo sapiens} SCOP: c.42.1.1 PDB: 1wva_A* 2pha_A 2pho_A 2pll_A* 2zav_A 3dj8_A* 3f80_A* 3gmz_A 3gn0_A* 3kv2_A* 3lp4_A* 3lp7_A* 3mfv_A* 3mfw_A* 3mjl_A 3sjt_A* 3skk_A* 3tf3_A 3th7_A 3the_A* ...
Probab=28.92 E-value=80 Score=31.21 Aligned_cols=97 Identities=13% Similarity=0.197 Sum_probs=65.4
Q ss_pred hhhhhHHHHHHHHHHHHhcCCeEEEecc-----------ccccccccccceeeeccCCCCcce------EEecCCchhhH
Q 011017 391 RREAINSLIEEAILEADAKGVKVISLGL-----------LNQGEELNRNGEIYLERQPNKLKI------KVVDGSSLAAA 453 (495)
Q Consensus 391 ~~~~in~~ie~ai~~a~~~g~kv~sl~~-----------ln~~~~ln~~g~~~~~~~p~~l~~------~vv~g~~l~~a 453 (495)
+-+..++.|++++.+.-+.|...+.||= +.+.. .+=|-+.++.|+ |++. ...||+.+..|
T Consensus 72 ~~~~~~~~i~~~v~~~l~~g~~pi~lGGdHsit~~~~~a~~~~~--~~~~vI~~DAH~-Dl~~~~~~~sg~~hG~~~~~a 148 (322)
T 2aeb_A 72 SVGKASEQLAGKVAEVKKNGRISLVLGGDHSLAIGSISGHARVH--PDLGVIWVDAHT-DINTPLTTTSGNLHGQPVSFL 148 (322)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHHHHHHC--TTCEEEEESSSC-CCCCTTTCSSCCGGGCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCeEEEecCccccchHHHHHHHhhC--CCEEEEEEecCc-ccCCCCCCCCCccccHHHHHH
Confidence 4677889999999999999999998872 22211 133688899999 8885 36788888888
Q ss_pred h-hhhcC----CC--------CCceEEEeccCCchhHHHHHHHHHhhcCcEee
Q 011017 454 V-VVNSL----PK--------TTAHVLLRGTVTANKVANAVASSLCQMGIKVS 493 (495)
Q Consensus 454 ~-v~~~i----p~--------~~~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~ 493 (495)
. ..... |. +.+.++..|--+.+ ..--.++.+.|+++.
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iGiR~~~---~~e~~~~~~~g~~~~ 198 (322)
T 2aeb_A 149 LKELKGKIPDVPGFSWVTPCISAKDIVYIGLRDVD---PGEHYILKTLGIKYF 198 (322)
T ss_dssp BGGGTTTSCCCTTCTTCCCCBCGGGEEEEEECCCC---HHHHHHHHHHTCEEE
T ss_pred HhccccccccccccccccccCCCCCEEEEEcCCCC---HHHHHHHHHcCCEEE
Confidence 7 65422 22 35678888876432 333344555666653
No 155
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=28.74 E-value=40 Score=34.33 Aligned_cols=30 Identities=27% Similarity=0.306 Sum_probs=26.7
Q ss_pred CceEEEeccCCchhHHHHHHHHHhhcCcEeeeC
Q 011017 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVSFS 495 (495)
Q Consensus 463 ~~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~~~ 495 (495)
-|.|.+.|.. +||+.+|..|.+.|.+|+++
T Consensus 173 GktV~V~G~G---~VG~~~A~~L~~~GakVvv~ 202 (364)
T 1leh_A 173 GLAVSVQGLG---NVAKALCKKLNTEGAKLVVT 202 (364)
T ss_dssp TCEEEEECCS---HHHHHHHHHHHHTTCEEEEE
T ss_pred cCEEEEECch---HHHHHHHHHHHHCCCEEEEE
Confidence 3679999986 89999999999999999864
No 156
>3d3k_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.20A {Homo sapiens}
Probab=28.67 E-value=54 Score=31.73 Aligned_cols=31 Identities=16% Similarity=0.200 Sum_probs=20.7
Q ss_pred ceEEEeccCCchhHHHHHHHHHhhcCcEeee
Q 011017 464 AHVLLRGTVTANKVANAVASSLCQMGIKVSF 494 (495)
Q Consensus 464 ~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~~ 494 (495)
+=++|+|..+-+==|.++|..|+++|++|.+
T Consensus 87 ~vlVlcG~GNNGGDGlv~AR~L~~~G~~V~v 117 (259)
T 3d3k_A 87 TVALLCGPHVKGAQGISCGRHLANHDVQVIL 117 (259)
T ss_dssp EEEEEECSSHHHHHHHHHHHHHHHTTCEEEE
T ss_pred eEEEEECCCCCHHHHHHHHHHHHHCCCeEEE
Confidence 3456776653234567888888888888764
No 157
>3hb7_A Isochorismatase hydrolase; PS structural genomics, midwest center for structural genomics structure initiative; 2.30A {Alkaliphilus metalliredigens}
Probab=28.58 E-value=2.9e+02 Score=25.13 Aligned_cols=33 Identities=24% Similarity=0.201 Sum_probs=28.4
Q ss_pred CCCceEEEeccCCchhHHHHHHHHHhhcCcEeee
Q 011017 461 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVSF 494 (495)
Q Consensus 461 ~~~~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~~ 494 (495)
.+.++|+++|-.+ +=--.+.|+-+.++|.+|.+
T Consensus 118 ~gi~~lvi~G~~T-~~CV~~Ta~dA~~~Gy~V~v 150 (204)
T 3hb7_A 118 EGIDTVVLTGVWT-NVCVRSTATDALANAYKVIT 150 (204)
T ss_dssp TTCCEEEEEEECT-TTHHHHHHHHHHHTTCEEEE
T ss_pred CCCCEEEEEeecc-cHHHHHHHHHHHHCCCEEEE
Confidence 4899999999987 55558889999999999986
No 158
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=28.58 E-value=68 Score=31.10 Aligned_cols=32 Identities=22% Similarity=0.098 Sum_probs=27.3
Q ss_pred CCCceEEEeccCCchhHHHHHHHHHhhcCcEeee
Q 011017 461 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVSF 494 (495)
Q Consensus 461 ~~~~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~~ 494 (495)
+.-+.|+.+|++ +-+|.+.+..+..+|.+|+.
T Consensus 147 ~~g~~vlV~Ga~--g~iG~~~~~~a~~~Ga~Vi~ 178 (334)
T 3qwb_A 147 KKGDYVLLFAAA--GGVGLILNQLLKMKGAHTIA 178 (334)
T ss_dssp CTTCEEEESSTT--BHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCEEEEECCC--CHHHHHHHHHHHHCCCEEEE
Confidence 344679999987 58999999999999999875
No 159
>3pzg_A Mannan endo-1,4-beta-mannosidase. glycosyl hydrol 5; alpha/beta barrel, glycosyl hydrolase, sugar binding, secret hydrolase; 1.40A {Thermotoga petrophila} PDB: 3pz9_A 3pzi_A* 3pzm_A 3pzn_A* 3pzo_A* 3pzq_A*
Probab=28.40 E-value=66 Score=32.93 Aligned_cols=77 Identities=22% Similarity=0.409 Sum_probs=49.1
Q ss_pred HHHHHHHHHHHHhcCCeEEEeccccccccccccceeeeccCCCCcceEEecCCchhhHhhhhcCCCCCceEEEeccCCch
Q 011017 396 NSLIEEAILEADAKGVKVISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTAN 475 (495)
Q Consensus 396 n~~ie~ai~~a~~~g~kv~sl~~ln~~~~ln~~g~~~~~~~p~~l~~~vv~g~~l~~a~v~~~ip~~~~~v~l~g~~~~~ 475 (495)
++.||+.+.++.++|++|+-+...|.+...|..+..+.+..| . +.| +|++.+ +|...+.
T Consensus 42 ~~~i~~~l~~~a~~G~N~VRv~~f~d~~~~~~~~~~~lqp~~-G----~yd------------~~~~~~----~~~~~~~ 100 (383)
T 3pzg_A 42 NRMIDSVLESARDMGIKVLRIWGFLDGESYCRDKNTYMHPEP-G----VFG------------VPEGIS----NAQNGFE 100 (383)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEECCCBSHHHHHHHTEESBSBT-T----BCS------------SCTTCS----SCEEHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEEeccccccccccccccccccCC-C----ccc------------cccccc----chHHHHH
Confidence 468999999999999999999988765533332222344344 1 111 122211 2444346
Q ss_pred hHHHHHHHHHhhcCcEeee
Q 011017 476 KVANAVASSLCQMGIKVSF 494 (495)
Q Consensus 476 k~~~a~a~~lc~~~~~v~~ 494 (495)
++-++|+ .+.++|++|++
T Consensus 101 ~LD~~i~-~A~k~GI~viL 118 (383)
T 3pzg_A 101 RLDYTIA-KAKELGIKLII 118 (383)
T ss_dssp HHHHHHH-HHHHHTCEEEE
T ss_pred HHHHHHH-HHHHCCCEEEE
Confidence 7877776 56789999987
No 160
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=28.35 E-value=65 Score=31.22 Aligned_cols=32 Identities=19% Similarity=0.213 Sum_probs=27.7
Q ss_pred CCCceEEEeccCCchhHHHHHHHHHhhcCcEeee
Q 011017 461 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVSF 494 (495)
Q Consensus 461 ~~~~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~~ 494 (495)
+.-+.|+.+|++ +-+|.+++..+.++|.+|+.
T Consensus 148 ~~g~~vlI~Ga~--g~iG~~~~~~a~~~Ga~Vi~ 179 (336)
T 4b7c_A 148 KNGETVVISGAA--GAVGSVAGQIARLKGCRVVG 179 (336)
T ss_dssp CTTCEEEESSTT--SHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCEEEEECCC--CHHHHHHHHHHHHCCCEEEE
Confidence 345689999998 58999999999999999875
No 161
>3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110}
Probab=28.23 E-value=55 Score=37.93 Aligned_cols=53 Identities=21% Similarity=0.285 Sum_probs=38.7
Q ss_pred CCCCcceEEecCCchhhHhhhhcCCCCCceEEEeccCCchhHHHHHHHHHhhc---CcEeee
Q 011017 436 QPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQM---GIKVSF 494 (495)
Q Consensus 436 ~p~~l~~~vv~g~~l~~a~v~~~ip~~~~~v~l~g~~~~~k~~~a~a~~lc~~---~~~v~~ 494 (495)
-| +=-+.||.|+.-+.+.++. - ++++.|.+||++ .+|++|+..++++ .++|++
T Consensus 704 lP-~gvv~vV~G~g~~g~~L~~-~-p~Vd~V~FTGSt---~vGr~I~~~aA~~~~~l~pv~l 759 (1001)
T 3haz_A 704 IP-KSALYLVTGDGRIGAALTA-H-PDIAGVVFTGST---EVARSINRALAAKDGPIVPLIA 759 (1001)
T ss_dssp CC-TTTEEECCCCHHHHHHHHH-C-TTCCEEEEESCH---HHHHHHHHHHHHSSSCCCCEEE
T ss_pred cC-cCcEEEEecCchHHHHHHh-C-CCcCEEEecCCH---HHHHHHHHHHhcccCCCceEEe
Confidence 47 5568889986544333332 2 459999999998 9999999999976 566653
No 162
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=28.18 E-value=45 Score=31.47 Aligned_cols=27 Identities=30% Similarity=0.327 Sum_probs=24.1
Q ss_pred eEEEeccCCchhHHHHHHHHHhhcCcEeee
Q 011017 465 HVLLRGTVTANKVANAVASSLCQMGIKVSF 494 (495)
Q Consensus 465 ~v~l~g~~~~~k~~~a~a~~lc~~~~~v~~ 494 (495)
.|.+.|+. .+|+++|..|.++|.+|.+
T Consensus 118 ~v~iiG~G---~~g~~~a~~l~~~g~~v~v 144 (263)
T 2d5c_A 118 PALVLGAG---GAGRAVAFALREAGLEVWV 144 (263)
T ss_dssp CEEEECCS---HHHHHHHHHHHHTTCCEEE
T ss_pred eEEEECCc---HHHHHHHHHHHHCCCEEEE
Confidence 79999986 8999999999999987765
No 163
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=28.10 E-value=70 Score=31.05 Aligned_cols=31 Identities=19% Similarity=0.098 Sum_probs=26.9
Q ss_pred CCceEEEeccCCchhHHHHHHHHHhhcCcEeee
Q 011017 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVSF 494 (495)
Q Consensus 462 ~~~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~~ 494 (495)
.-+.|+.+|++ +-+|.+++..+.++|.+|+.
T Consensus 155 ~g~~vlI~Ga~--g~iG~~~~~~a~~~G~~V~~ 185 (345)
T 2j3h_A 155 EGETVYVSAAS--GAVGQLVGQLAKMMGCYVVG 185 (345)
T ss_dssp TTCEEEESSTT--SHHHHHHHHHHHHTTCEEEE
T ss_pred CCCEEEEECCC--cHHHHHHHHHHHHCCCEEEE
Confidence 34679999998 58999999999999999875
No 164
>3lqy_A Putative isochorismatase hydrolase; structural genomics, PSI-2, PROT structure initiative, midwest center for structural genomic; 1.75A {Oleispira antarctica} SCOP: c.33.1.0
Probab=27.84 E-value=3.3e+02 Score=24.32 Aligned_cols=33 Identities=15% Similarity=0.307 Sum_probs=27.7
Q ss_pred CCCceEEEeccCCchhHHHHHHHHHhhcCcEeee
Q 011017 461 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVSF 494 (495)
Q Consensus 461 ~~~~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~~ 494 (495)
.+.++|+++|-.+ +=-=.+.|+.+.++|.+|.+
T Consensus 111 ~gi~~lii~G~~T-~~CV~~Ta~da~~~Gy~v~v 143 (190)
T 3lqy_A 111 AGIKKLVIVGAMT-HMAIDAVTRAAEDLGYECAV 143 (190)
T ss_dssp C-CCEEEEEEECT-TTHHHHHHHHHHHHTCEEEE
T ss_pred CCCCEEEEEecCc-ChHHHHHHHHHHHCCCEEEE
Confidence 3899999999987 55568889999999999986
No 165
>1nba_A N-carbamoylsarcosine amidohydrolase; hydrolase(IN linear amides); 2.00A {Arthrobacter SP} SCOP: c.33.1.3
Probab=27.77 E-value=2.3e+02 Score=27.15 Aligned_cols=37 Identities=8% Similarity=0.189 Sum_probs=30.3
Q ss_pred hhhcCCCCCceEEEeccCCchhHHHHHHHHHhhcCcEeee
Q 011017 455 VVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVSF 494 (495)
Q Consensus 455 v~~~ip~~~~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~~ 494 (495)
.|.+ .++++|+++|-.+ +=--.+.|+.+.++|.+|.+
T Consensus 158 ~Lr~--~gi~~lvI~Gv~T-~~CV~~Ta~dA~~~Gy~V~V 194 (264)
T 1nba_A 158 FLTS--NRIDTLIVTGATA-AGCVRHTVEDAIAKGFRPII 194 (264)
T ss_dssp HHHH--TTCCEEEEEEECT-TTHHHHHHHHHHHHTCEEEE
T ss_pred HHHh--CCCCEEEEEecCc-CCHHHHHHHHHHHCCCEEEE
Confidence 4554 4899999999987 55557889999999999986
No 166
>1yzv_A Hypothetical protein; structural genomics, PSI, protein structure initiative, STRU genomics of pathogenic protozoa consortium, SGPP; 2.00A {Trypanosoma cruzi}
Probab=27.35 E-value=1.7e+02 Score=26.90 Aligned_cols=33 Identities=27% Similarity=0.247 Sum_probs=28.5
Q ss_pred CCCceEEEeccCCchhHHHHHHHHHhhcCcEeee
Q 011017 461 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVSF 494 (495)
Q Consensus 461 ~~~~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~~ 494 (495)
.|.++|+++|-.+ +=--.+.|+-+.++|.+|.+
T Consensus 108 ~gi~~lvi~Gv~T-~~CV~~Ta~dA~~~Gy~V~v 140 (204)
T 1yzv_A 108 PEVEQVVLWGFET-HVCILQTAAALLDMKKKVVI 140 (204)
T ss_dssp TTEEEEEEEEECT-TTHHHHHHHHHHHTTCEEEE
T ss_pred CCCCEEEEEEecc-CHHHHHHHHHHHHCCCEEEE
Confidence 3899999999987 55568899999999999986
No 167
>3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A*
Probab=27.10 E-value=56 Score=34.38 Aligned_cols=48 Identities=13% Similarity=0.140 Sum_probs=31.2
Q ss_pred CcceEEecCCchh-hHhhhhcCCCCCceEEEeccCCchhHHHHHHHHHhhcCcEee
Q 011017 439 KLKIKVVDGSSLA-AAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVS 493 (495)
Q Consensus 439 ~l~~~vv~g~~l~-~a~v~~~ip~~~~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~ 493 (495)
+=-+.||.|+.-. .+.++. -++++.|++||++ ++|++|+.... ..+|.
T Consensus 191 ~gvv~vv~g~~~~~g~~L~~--~p~vd~V~fTGS~---~~g~~i~~~aa--~~~v~ 239 (486)
T 3pqa_A 191 LGVYNLLTGAGEVVGDEIVV--NEKVNMISFTGSS---KVGELITKKAG--FKKIA 239 (486)
T ss_dssp GGGEEECCSCTTTHHHHHHH--CTTCCEEEEESCH---HHHHHHHHHCC--SSEEE
T ss_pred CCeEEEEeCCchHHHHHHHh--CCCccEEEEECCh---HHHHHHHHHcC--CCcee
Confidence 3346677775433 233333 3578899999998 89999987654 55554
No 168
>3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus}
Probab=27.01 E-value=22 Score=37.25 Aligned_cols=50 Identities=14% Similarity=0.149 Sum_probs=31.3
Q ss_pred CcceEEecCCc--hhhHhhhhcCCCCCceEEEeccCCchhHHHHHHHHHhhcCcEeee
Q 011017 439 KLKIKVVDGSS--LAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVSF 494 (495)
Q Consensus 439 ~l~~~vv~g~~--l~~a~v~~~ip~~~~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~~ 494 (495)
+=-+.+|+|+. ...+.+- -++++.|.+||++ ++|+.|+....++..+|++
T Consensus 196 ~gvv~vv~g~~~~~~~~L~~---~~~v~~v~fTGS~---~~G~~i~~~aa~~~~~v~l 247 (478)
T 3ty7_A 196 KGVFNLVNGDGAGVGNPLSE---HPKVRMMSFTGSG---PTGSKIMEKAAKDFKKVSL 247 (478)
T ss_dssp TTTEEECCCCTTTTHHHHHH---CTTCCEEEECSCH---HHHCC--CSTTTTTCEEEC
T ss_pred cCeEEEEECCChHHHHHHHh---CCCcCEEEEECcH---HHHHHHHHHHHhcCCceEE
Confidence 33466777643 2233222 2467888889887 8888888887777777764
No 169
>3d6n_B Aspartate carbamoyltransferase; reactor, chamber, pores, internal cavity, hydrolase, metal-B pyrimidine biosynthesis, hydrolase-transferase; HET: FLC; 2.30A {Aquifex aeolicus}
Probab=27.01 E-value=1.1e+02 Score=30.38 Aligned_cols=89 Identities=20% Similarity=0.315 Sum_probs=63.6
Q ss_pred HHhcCCeEEEec----cccccccc-------cccc-eeeeccCCC----------CcceEEec-CCch--------h-hH
Q 011017 406 ADAKGVKVISLG----LLNQGEEL-------NRNG-EIYLERQPN----------KLKIKVVD-GSSL--------A-AA 453 (495)
Q Consensus 406 a~~~g~kv~sl~----~ln~~~~l-------n~~g-~~~~~~~p~----------~l~~~vv~-g~~l--------~-~a 453 (495)
+.+.|..|+.|+ -++|+|.+ ++.| -..|-|||. ..+|-|++ |.+- + ..
T Consensus 56 ~~~LGg~~i~l~~~~ss~~kgEsl~DTarvls~~~~D~iviR~~~~~~~~~~la~~~~vPVINAG~g~~~HPtQaLaDl~ 135 (291)
T 3d6n_B 56 ARELGIETYLVSGSESSTVKGESFFDTLKTFEGLGFDYVVFRVPFVFFPYKEIVKSLNLRLVNAGDGTHQHPSQGLIDFF 135 (291)
T ss_dssp HHHTTCEEEEEETTTTSCCTTCCHHHHHHHHHHTTCSEEEEEESSCCCSCHHHHHTCSSEEEEEEETTTBCHHHHHHHHH
T ss_pred HHHhCCeEEEECCccCcccCCCcHHHHHHHHHHhcCCEEEEEcCChHHHHHHHHHhCCCCEEeCccCCCcCcHHHHHHHH
Confidence 567899999996 45788875 6777 888888882 23678888 7542 2 12
Q ss_pred hhhhcCCC-CCceEEEeccCCchhHHHHHHHHHhhcCcEeee
Q 011017 454 VVVNSLPK-TTAHVLLRGTVTANKVANAVASSLCQMGIKVSF 494 (495)
Q Consensus 454 ~v~~~ip~-~~~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~~ 494 (495)
.|.....+ +-..|-+.|....|-+++..+..|++-|++|.+
T Consensus 136 Ti~e~~g~l~gl~va~vGDl~~~rva~Sl~~~~~~~g~~v~~ 177 (291)
T 3d6n_B 136 TIKEHFGEVKDLRVLYVGDIKHSRVFRSGAPLLNMFGAKIGV 177 (291)
T ss_dssp HHHHHHSCCTTCEEEEESCCTTCHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHhCCcCCcEEEEECCCCCCchHHHHHHHHHHCCCEEEE
Confidence 34444332 234688899943369999999999999999875
No 170
>4g1v_A Flavohemoglobin; three domains: globin fold, antiparallel beta-barrel, alpha/ fold, RESP., FAD, oxidoreductase; HET: HEM FAD; 2.10A {Saccharomyces cerevisiae} PDB: 4g1b_A*
Probab=26.61 E-value=64 Score=32.35 Aligned_cols=54 Identities=19% Similarity=0.247 Sum_probs=40.7
Q ss_pred eccCCCCcceEEecCC---chhhHhhhhcCCCCCceEEEeccCCchhHHHHHHHHHhhcCcE
Q 011017 433 LERQPNKLKIKVVDGS---SLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIK 491 (495)
Q Consensus 433 ~~~~p~~l~~~vv~g~---~l~~a~v~~~ip~~~~~v~l~g~~~~~k~~~a~a~~lc~~~~~ 491 (495)
.+++| ++++.++..+ .++.+.+...+|+ ..+|++||.. .+-+++..+|.++|+.
T Consensus 325 ~~~~~-~~~~~~~~s~~~g~~~~~~l~~~~~~-~~~vyvCGp~---~m~~~v~~~L~~~Gv~ 381 (399)
T 4g1v_A 325 LAECA-NVDKIIVHTDTEPLINAAFLKEKSPA-HADVYTCGSL---AFMQAMIGHLKELEHR 381 (399)
T ss_dssp HTTCS-SEEEEEEETTTSCCCCHHHHHHHSCS-SCEEEEEECH---HHHHHHHHHHHHTTCC
T ss_pred HHhCC-CcEEEEEEeCCCCcccHHHHHhhCCC-CCEEEEECCH---HHHHHHHHHHHHcCCC
Confidence 34678 7888777432 4555666666776 6799999997 6789999999999975
No 171
>3ot4_A Putative isochorismatase; NICF, maleamate hydrolase, hydrol; 2.40A {Bordetella bronchiseptica} PDB: 3uao_A
Probab=25.78 E-value=3.3e+02 Score=25.59 Aligned_cols=32 Identities=16% Similarity=0.212 Sum_probs=27.8
Q ss_pred CCceEEEeccCCchhHHHHHHHHHhhcCcEeee
Q 011017 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVSF 494 (495)
Q Consensus 462 ~~~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~~ 494 (495)
+.++|+++|-.+ +=--.+.|+-+.++|.+|.+
T Consensus 158 gi~~lvi~G~~T-~~CV~~Ta~da~~~Gy~V~v 189 (236)
T 3ot4_A 158 GVQTLLVAGATT-SGCVRASVVDAMSAGFRPLV 189 (236)
T ss_dssp TCCEEEEEESCT-TTHHHHHHHHHHHHTCEEEE
T ss_pred CCCEEEEeCccC-cHHHHHHHHHHHHCCCEEEE
Confidence 899999999987 55557889999999999986
No 172
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=25.74 E-value=52 Score=32.27 Aligned_cols=29 Identities=10% Similarity=0.140 Sum_probs=26.3
Q ss_pred ceEEEeccCCchhHHHHHHHHHhhcCc-Eeee
Q 011017 464 AHVLLRGTVTANKVANAVASSLCQMGI-KVSF 494 (495)
Q Consensus 464 ~~v~l~g~~~~~k~~~a~a~~lc~~~~-~v~~ 494 (495)
+.|+.+|++ +-+|.+++..+.++|. +|+.
T Consensus 162 ~~vlI~Gas--ggiG~~~~~~a~~~Ga~~Vi~ 191 (357)
T 2zb4_A 162 KTMVVSGAA--GACGSVAGQIGHFLGCSRVVG 191 (357)
T ss_dssp CEEEESSTT--BHHHHHHHHHHHHTTCSEEEE
T ss_pred cEEEEECCC--cHHHHHHHHHHHHCCCCeEEE
Confidence 789999998 5899999999999999 8875
No 173
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=25.65 E-value=1.4e+02 Score=28.39 Aligned_cols=33 Identities=18% Similarity=0.314 Sum_probs=27.9
Q ss_pred CCCCceEEEeccCCchhHHHHHHHHHhhcCcEeee
Q 011017 460 PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVSF 494 (495)
Q Consensus 460 p~~~~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~~ 494 (495)
.+.-+.|+.+|++ +-+|.+++..+..+|.+|+.
T Consensus 123 ~~~g~~vlV~Ga~--G~vG~~~~~~a~~~Ga~Vi~ 155 (302)
T 1iz0_A 123 ARPGEKVLVQAAA--GALGTAAVQVARAMGLRVLA 155 (302)
T ss_dssp CCTTCEEEESSTT--BHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCCEEEEECCC--cHHHHHHHHHHHHCCCEEEE
Confidence 4445689999998 58999999999999999864
No 174
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=25.54 E-value=76 Score=30.90 Aligned_cols=32 Identities=6% Similarity=0.075 Sum_probs=27.2
Q ss_pred CCCceEEEeccCCchhHHHHHHHHHhhcCcEeee
Q 011017 461 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVSF 494 (495)
Q Consensus 461 ~~~~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~~ 494 (495)
+.-+.|+.+|+. +-+|.+.+..+..+|.+|+.
T Consensus 143 ~~g~~VlV~Ga~--g~iG~~~~~~a~~~Ga~Vi~ 174 (340)
T 3gms_A 143 QRNDVLLVNACG--SAIGHLFAQLSQILNFRLIA 174 (340)
T ss_dssp CTTCEEEESSTT--SHHHHHHHHHHHHHTCEEEE
T ss_pred CCCCEEEEeCCc--cHHHHHHHHHHHHcCCEEEE
Confidence 344689999998 58999999999999999875
No 175
>4gim_A Pseudouridine-5'-phosphate glycosidase; alpha-beta-alpha sandwich fold, hydrolase; HET: PSU; 1.80A {Escherichia coli} PDB: 4gij_A 4gik_A* 4gil_A*
Probab=25.11 E-value=34 Score=34.77 Aligned_cols=68 Identities=29% Similarity=0.479 Sum_probs=42.3
Q ss_pred eeccchhhhhhHHHHHHHHHHHHhcCCeEEEeccccccccccccceeeeccCCCCcceEEecCCchhh--HhhhhcCCCC
Q 011017 385 QYNLPWRREAINSLIEEAILEADAKGVKVISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAA--AVVVNSLPKT 462 (495)
Q Consensus 385 ~y~~~~~~~~in~~ie~ai~~a~~~g~kv~sl~~ln~~~~ln~~g~~~~~~~p~~l~~~vv~g~~l~~--a~v~~~ip~~ 462 (495)
.|-+ ..+-|++.||+|+.||++.|++ +++. +=|+-++ =.+.-+|.||.| |.|.|+
T Consensus 263 e~~i--~~~~i~~~I~~Al~eA~~~gI~---------Gk~v----TPfLL~~----i~elT~G~Sl~aNiaLv~nN---- 319 (335)
T 4gim_A 263 QFAM--PEHTINAAIDQAVAEAEAQGVI---------GKES----TPFLLAR----VAELTGGDSLKSNIQLVFNN---- 319 (335)
T ss_dssp GGCC--CHHHHHHHHHHHHHHHHHHTCC---------GGGH----HHHHHHH----HHHHTTTHHHHHHHHHHHHH----
T ss_pred hhcC--CHHHHHHHHHHHHHHHHHcCCc---------CCcc----ChHHHHH----HHHHhCCccHHHHHHHHHHH----
Confidence 4444 3567999999999999999985 3322 1122111 112336777776 344442
Q ss_pred CceEEEeccCCchhHHHHHHHHHhh
Q 011017 463 TAHVLLRGTVTANKVANAVASSLCQ 487 (495)
Q Consensus 463 ~~~v~l~g~~~~~k~~~a~a~~lc~ 487 (495)
-|+|--||..|+|
T Consensus 320 ------------A~laa~IA~~l~~ 332 (335)
T 4gim_A 320 ------------AILASEIAKEYQR 332 (335)
T ss_dssp ------------HHHHHHHHHHHHH
T ss_pred ------------HHHHHHHHHHHHH
Confidence 3788888888776
No 176
>3pzl_A Agmatine ureohydrolase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.70A {Thermoplasma volcanium GSS1}
Probab=24.96 E-value=43 Score=33.40 Aligned_cols=94 Identities=12% Similarity=0.085 Sum_probs=59.7
Q ss_pred chhhhhhHHHHHHHHHHHHhcCCeEEEec-----------cccccccccccceeeeccCCCCcceEEecCCchhhHhhhh
Q 011017 389 PWRREAINSLIEEAILEADAKGVKVISLG-----------LLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVN 457 (495)
Q Consensus 389 ~~~~~~in~~ie~ai~~a~~~g~kv~sl~-----------~ln~~~~ln~~g~~~~~~~p~~l~~~vv~g~~l~~a~v~~ 457 (495)
+...+...+.|++++.+.-+.|...|.|| ++.+ +=|-+.++.|+ |++-- .+|+.+.-|.+..
T Consensus 93 ~~~~~~~~~~i~~~v~~~l~~g~~PivlGGdHsit~~~~~a~~~-----~l~vI~~DAH~-Dl~~~-~~g~~~shgt~~~ 165 (313)
T 3pzl_A 93 SEDVEYVIDTVESVVSAVMSDGKIPIMLGGEHSITVGAVRALPK-----DVDLVIVDAHS-DFRSS-YMGNKYNHACVTR 165 (313)
T ss_dssp CSCHHHHHHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHTTCCS-----SEEEEEECSBC-CCCSC-BTTBTTSTTSHHH
T ss_pred CCCHHHHHHHHHHHHHHHHhCCCEEEEECCchHHHHHHHHHhcc-----CCcEEEecCcc-ccccc-cCCCCcCcHHHHH
Confidence 34567889999999999999999999887 3433 34678899999 88763 3455555454444
Q ss_pred cCCC--CCceEEEeccCCchhHHHHHHHHHhhcCcEe
Q 011017 458 SLPK--TTAHVLLRGTVTANKVANAVASSLCQMGIKV 492 (495)
Q Consensus 458 ~ip~--~~~~v~l~g~~~~~k~~~a~a~~lc~~~~~v 492 (495)
.+-+ +.+.++..|--+.+ ..-..++-+.|+++
T Consensus 166 ~~~e~~~~~~~~~iGiR~~~---~~e~~~~~~~gi~~ 199 (313)
T 3pzl_A 166 RALDLLGEGRITSIGIRSVS---REEFEDPDFRKVSF 199 (313)
T ss_dssp HHHHHHCSSSEEEEEECBCC---HHHHTSGGGGGSEE
T ss_pred HHHhcCCCCeEEEEeCCCCC---HHHHHHHHHCCCEE
Confidence 3322 24456666665322 22233344556655
No 177
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=24.88 E-value=86 Score=30.78 Aligned_cols=31 Identities=16% Similarity=0.085 Sum_probs=26.9
Q ss_pred CCceEEEeccCCchhHHHHHHHHHhhcCcEeee
Q 011017 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVSF 494 (495)
Q Consensus 462 ~~~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~~ 494 (495)
.-+.|+.+|++ +-+|.+++..+..+|.+|+.
T Consensus 162 ~g~~vlV~Ga~--ggiG~~~~~~a~~~Ga~Vi~ 192 (354)
T 2j8z_A 162 AGDYVLIHAGL--SGVGTAAIQLTRMAGAIPLV 192 (354)
T ss_dssp TTCEEEESSTT--SHHHHHHHHHHHHTTCEEEE
T ss_pred CCCEEEEECCc--cHHHHHHHHHHHHcCCEEEE
Confidence 34679999988 58999999999999999875
No 178
>3d3j_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.80A {Homo sapiens}
Probab=24.51 E-value=56 Score=32.50 Aligned_cols=30 Identities=17% Similarity=0.200 Sum_probs=19.6
Q ss_pred eEEEeccCCchhHHHHHHHHHhhcCcEeee
Q 011017 465 HVLLRGTVTANKVANAVASSLCQMGIKVSF 494 (495)
Q Consensus 465 ~v~l~g~~~~~k~~~a~a~~lc~~~~~v~~ 494 (495)
=++|+|..+-+==|.++|..|+++|++|.+
T Consensus 135 vlVlcG~GNNGGDGlv~AR~L~~~G~~V~V 164 (306)
T 3d3j_A 135 VALLCGPHVKGAQGISCGRHLANHDVQVIL 164 (306)
T ss_dssp EEEEECSSHHHHHHHHHHHHHHHTTCEEEE
T ss_pred EEEEECCCCCHHHHHHHHHHHHHCCCcEEE
Confidence 356666553234567778888888887764
No 179
>2g0t_A Conserved hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.67A {Thermotoga maritima} SCOP: c.37.1.10
Probab=24.32 E-value=1.3e+02 Score=30.44 Aligned_cols=89 Identities=24% Similarity=0.160 Sum_probs=50.9
Q ss_pred hHHHHHHHHHHHHhcCCeEEEec--cccccccccc-----cceeeeccCCCCcceEEecCCchhh-HhhhhcCCCCCceE
Q 011017 395 INSLIEEAILEADAKGVKVISLG--LLNQGEELNR-----NGEIYLERQPNKLKIKVVDGSSLAA-AVVVNSLPKTTAHV 466 (495)
Q Consensus 395 in~~ie~ai~~a~~~g~kv~sl~--~ln~~~~ln~-----~g~~~~~~~p~~l~~~vv~g~~l~~-a~v~~~ip~~~~~v 466 (495)
+.+-.-+-|.+|=+.|..|+|-- .|++.++|.. |-+++--++| . | .|.. ..-..+| .++.+
T Consensus 104 l~~~~~~~I~~Al~~G~nVvsglh~~l~~~pel~~~A~~~Gv~i~dvr~~-p------~--~l~v~~g~i~~i--~~~ri 172 (350)
T 2g0t_A 104 LEEQIATLVKKALSLGMDVISGLHFKISQQTEFLKIAHENGTRIIDIRIP-P------L--ELDVLRGGIYRK--KIKVV 172 (350)
T ss_dssp HHHHHHHHHHHHHHTTCEEEECCCC--CCHHHHHHHHHHHTCCEEESSSC-C------S--SCCCCCSGGGGC--CSEEE
T ss_pred CCHHHHHHHHHHHHcCCcEEeCChhhhhCCHHHHHHHHHCCCEEEEeCcC-C------C--cccccccceeee--cceEE
Confidence 44445556667778999998843 3555555544 4555555666 2 1 1111 1122222 45678
Q ss_pred EEeccCC-chh--HHHHHHHHHhhcCcEeee
Q 011017 467 LLRGTVT-ANK--VANAVASSLCQMGIKVSF 494 (495)
Q Consensus 467 ~l~g~~~-~~k--~~~a~a~~lc~~~~~v~~ 494 (495)
|.+|..+ ..| +..++..+|.++|++|..
T Consensus 173 ~v~GTDt~vGKt~t~~~L~~~l~~~G~~v~~ 203 (350)
T 2g0t_A 173 GVFGTDCVVGKRTTAVQLWERALEKGIKAGF 203 (350)
T ss_dssp EEEESSSSSSHHHHHHHHHHHHHHTTCCEEE
T ss_pred EEecCCCCccCccHHHHHHHHHHhcCCeEEE
Confidence 8888643 234 345667799999998854
No 180
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=24.23 E-value=68 Score=33.36 Aligned_cols=31 Identities=23% Similarity=0.307 Sum_probs=27.3
Q ss_pred CCCceEEEeccCCchhHHHHHHHHHhhcCcEeee
Q 011017 461 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVSF 494 (495)
Q Consensus 461 ~~~~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~~ 494 (495)
...+.|-+.|+. .+|.+||..|+++|++|.+
T Consensus 35 ~~~~kV~VIGaG---~MG~~iA~~la~~G~~V~l 65 (463)
T 1zcj_A 35 QPVSSVGVLGLG---TMGRGIAISFARVGISVVA 65 (463)
T ss_dssp CCCCEEEEECCS---HHHHHHHHHHHTTTCEEEE
T ss_pred CCCCEEEEECcC---HHHHHHHHHHHhCCCeEEE
Confidence 346789999997 8999999999999999975
No 181
>2gks_A Bifunctional SAT/APS kinase; transferase, sulfurylase; HET: ADP; 2.31A {Aquifex aeolicus}
Probab=23.97 E-value=1.3e+02 Score=32.17 Aligned_cols=87 Identities=21% Similarity=0.282 Sum_probs=48.9
Q ss_pred HHhcCCeEEEeccccccccccccceeeeccCCCCcceEE-ecCCch-------------------hhHhhhhcCCC---C
Q 011017 406 ADAKGVKVISLGLLNQGEELNRNGEIYLERQPNKLKIKV-VDGSSL-------------------AAAVVVNSLPK---T 462 (495)
Q Consensus 406 a~~~g~kv~sl~~ln~~~~ln~~g~~~~~~~p~~l~~~v-v~g~~l-------------------~~a~v~~~ip~---~ 462 (495)
+++.|++.+.+--.-.++. -|+-..+++-||+-.+++ ++|..+ .++++-...|+ .
T Consensus 294 ~~~lgi~~v~fd~~~y~~~--~g~~i~id~~~~~~~~~~~iSgt~iR~~~L~~g~~~p~~~~r~eV~~~lr~~~~~~~~~ 371 (546)
T 2gks_A 294 EDEIGIKMVPFEELVYVPE--LDQYVEINEAKKRNLKYINISGTEIRENFLKQGRKLPEWFTRPEVAEILAETYVPKHKQ 371 (546)
T ss_dssp HHHHTCEEEECCCCEEETT--TTEEECSCC---------------CTHHHHTTTCCCCTTTSCHHHHHHHHHHSCCGGGC
T ss_pred ccccCceEEeccceEEEcC--CCeEEeeeccCCCCceeeecchhhhhhhhhcCCCCCCccccchhHHHHHHHhhcccccc
Confidence 5679999998877766665 344456676674233333 344322 33344444443 3
Q ss_pred CceEEEeccCCchh--HHHHHHHHHhhcCcEeee
Q 011017 463 TAHVLLRGTVTANK--VANAVASSLCQMGIKVSF 494 (495)
Q Consensus 463 ~~~v~l~g~~~~~k--~~~a~a~~lc~~~~~v~~ 494 (495)
..-|+++|....+| +|++++..|.++|.+|.+
T Consensus 372 ~~~I~l~G~~GsGKSTia~~La~~L~~~G~~~~~ 405 (546)
T 2gks_A 372 GFCVWLTGLPCAGKSTIAEILATMLQARGRKVTL 405 (546)
T ss_dssp CEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEE
T ss_pred ceEEEccCCCCCCHHHHHHHHHHHhhhcCCeEEE
Confidence 45688988765556 888899888888877643
No 182
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=23.94 E-value=45 Score=42.30 Aligned_cols=28 Identities=14% Similarity=0.140 Sum_probs=25.0
Q ss_pred CceEEEeccCCchhHHHHHHHHHhhcCcEe
Q 011017 463 TAHVLLRGTVTANKVANAVASSLCQMGIKV 492 (495)
Q Consensus 463 ~~~v~l~g~~~~~k~~~a~a~~lc~~~~~v 492 (495)
-|-+++||++ +-+|++||..|.++|.++
T Consensus 1884 ~k~~lITGgs--~GIG~aia~~la~~Ga~~ 1911 (2512)
T 2vz8_A 1884 HKSYVITGGL--GGFGLQLAQWLRLRGAQK 1911 (2512)
T ss_dssp TCEEEEESTT--SHHHHHHHHHHHHTTCCE
T ss_pred CCEEEEECCC--CCHHHHHHHHHHHCCCCE
Confidence 3568999999 689999999999999983
No 183
>3qks_C DNA double-strand break repair protein MRE11; RECA-like fold, coiled-coils, ATPase, exonuclease, endonucle binding, DNA binding; HET: DNA; 2.10A {Pyrococcus furiosus} PDB: 3qkr_C* 3qku_C*
Probab=23.89 E-value=17 Score=24.83 Aligned_cols=24 Identities=17% Similarity=0.163 Sum_probs=12.3
Q ss_pred eeccchhhhhhHHHHHHHHHHHHh
Q 011017 385 QYNLPWRREAINSLIEEAILEADA 408 (495)
Q Consensus 385 ~y~~~~~~~~in~~ie~ai~~a~~ 408 (495)
.||.|.+.+.||.+=|++|.+-|+
T Consensus 2 e~Ft~~ElKiI~l~Gek~~e~~d~ 25 (34)
T 3qks_C 2 DFFTEFELKIIDILGEKDFDDFDY 25 (34)
T ss_dssp ----CHHHHHHHHC------CHHH
T ss_pred ccccHHHHHHHHHHccchHHHHHH
Confidence 599999999999999999887664
No 184
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=23.82 E-value=67 Score=34.65 Aligned_cols=31 Identities=13% Similarity=0.195 Sum_probs=27.3
Q ss_pred CCCceEEEeccCCchhHHHHHHHHHhhcCcEeee
Q 011017 461 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVSF 494 (495)
Q Consensus 461 ~~~~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~~ 494 (495)
....+|...|+. =.|-+.|.+|.++|.+|+|
T Consensus 270 ~~~~DVvIIGgG---iaGlsaA~~La~~G~~V~v 300 (676)
T 3ps9_A 270 SSKREAAIIGGG---IASALLSLALLRRGWQVTL 300 (676)
T ss_dssp CSCCEEEEECCS---HHHHHHHHHHHTTTCEEEE
T ss_pred CCCCCEEEECCC---HHHHHHHHHHHHCCCeEEE
Confidence 344799999997 6799999999999999987
No 185
>1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A*
Probab=23.78 E-value=70 Score=33.35 Aligned_cols=48 Identities=6% Similarity=0.123 Sum_probs=29.8
Q ss_pred CcceEEecCCch-hhHhhhhcCCCCCceEEEeccCCchhHHHHHHHHHhhcCcEee
Q 011017 439 KLKIKVVDGSSL-AAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVS 493 (495)
Q Consensus 439 ~l~~~vv~g~~l-~~a~v~~~ip~~~~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~ 493 (495)
+=-+.||.|+.- +.+.++.. ++++.|.+||.+ ++|++|+.... ..+|+
T Consensus 200 ~gvv~vv~g~~~~~~~~L~~~--~~v~~V~fTGS~---~~g~~i~~~aa--~~~v~ 248 (475)
T 1euh_A 200 AGVFNTITGRGSEIGDYIVEH--QAVNFINFTGST---GIGERIGKMAG--MRPIM 248 (475)
T ss_dssp TTTEEECCCCHHHHHHHHHHC--TTCCEEEEESCH---HHHHHHHHHTT--TSCEE
T ss_pred cCeEEEEeCCcHHHHHHHHhC--CCcCEEEEECch---HHHHHHHHhcC--CCcEE
Confidence 334677777632 22222222 468889999987 88998887643 55554
No 186
>4ekn_B Aspartate carbamoyltransferase; atcase, aspartate transcarbamoylase, pyrimidine biosynthesis thermostability, substrate channeling; 2.50A {Methanocaldococcus jannaschii} PDB: 3e2p_A 2rgw_A
Probab=23.78 E-value=1.6e+02 Score=29.34 Aligned_cols=89 Identities=15% Similarity=0.343 Sum_probs=62.1
Q ss_pred HHhcCCeEEEecc-----ccccccc-------cccceeeeccCCC---------CcceEEecC-Cc--------hh-hHh
Q 011017 406 ADAKGVKVISLGL-----LNQGEEL-------NRNGEIYLERQPN---------KLKIKVVDG-SS--------LA-AAV 454 (495)
Q Consensus 406 a~~~g~kv~sl~~-----ln~~~~l-------n~~g~~~~~~~p~---------~l~~~vv~g-~~--------l~-~a~ 454 (495)
+.+.|..|+.|+. ++|+|.+ .+.+-..|-|||. ..+|=|++| ++ |+ .-.
T Consensus 62 ~~~LGg~~i~l~~~~~ss~~kgEsl~DTarvls~~~D~iviR~~~~~~~~~lA~~~~vPVINag~g~~~HPtQ~LaDl~T 141 (306)
T 4ekn_B 62 MKRLGGEVITMTDLKSSSVAKGESLIDTIRVISGYADIIVLRHPSEGAARLASEYSQVPIINAGDGSNQHPTQTLLDLYT 141 (306)
T ss_dssp HHHTTCEEEEECCCTTTTSSSSCCHHHHHHHHHHHCSEEEEECSSTTHHHHHHHHCSSCEEESCSSSSCCHHHHHHHHHH
T ss_pred HHHcCCEEEEcCCcccccCCCCCCHHHHHHHHHHhCcEEEEEcCChHHHHHHHHhCCCCEEeCCCCCCcCcHHHHHHHHH
Confidence 4568999999975 7788765 5677788889982 245678877 32 11 223
Q ss_pred hhhcCCC-CCceEEEeccCCchhHHHHHHHHHhhc-CcEeee
Q 011017 455 VVNSLPK-TTAHVLLRGTVTANKVANAVASSLCQM-GIKVSF 494 (495)
Q Consensus 455 v~~~ip~-~~~~v~l~g~~~~~k~~~a~a~~lc~~-~~~v~~ 494 (495)
|..+... +-..|-+.|...-|-+++..+..+++- |++|.+
T Consensus 142 i~e~~g~l~glkva~vGD~~~~rva~Sl~~~~~~~~G~~v~~ 183 (306)
T 4ekn_B 142 IMREIGRIDGIKIAFVGDLKYGRTVHSLVYALSLFENVEMYF 183 (306)
T ss_dssp HHHHHSCSTTCEEEEESCTTTCHHHHHHHHHHHTSSSCEEEE
T ss_pred HHHHhCCcCCCEEEEEcCCCCCcHHHHHHHHHHhcCCCEEEE
Confidence 4444332 334788899874347999999999998 999875
No 187
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=23.58 E-value=64 Score=32.29 Aligned_cols=28 Identities=29% Similarity=0.347 Sum_probs=25.5
Q ss_pred ceEEEeccCCchhHHHHHHHHHhhcCcEeee
Q 011017 464 AHVLLRGTVTANKVANAVASSLCQMGIKVSF 494 (495)
Q Consensus 464 ~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~~ 494 (495)
+.|+++|+. .+|+++|..|.+.|.+|.+
T Consensus 167 ~~V~ViGaG---~iG~~~a~~l~~~Ga~V~~ 194 (369)
T 2eez_A 167 ASVVILGGG---TVGTNAAKIALGMGAQVTI 194 (369)
T ss_dssp CEEEEECCS---HHHHHHHHHHHHTTCEEEE
T ss_pred CEEEEECCC---HHHHHHHHHHHhCCCEEEE
Confidence 679999994 9999999999999999875
No 188
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=23.49 E-value=1.9e+02 Score=28.27 Aligned_cols=32 Identities=16% Similarity=0.222 Sum_probs=27.3
Q ss_pred CCCceEEEeccCCchhHHHHHHHHHhhcCcEeee
Q 011017 461 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVSF 494 (495)
Q Consensus 461 ~~~~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~~ 494 (495)
+.-+.|+.+|++ +-+|.+++..+..+|.+|+.
T Consensus 166 ~~g~~VlV~Gg~--g~iG~~~~~~a~~~Ga~Vi~ 197 (353)
T 4dup_A 166 TEGESVLIHGGT--SGIGTTAIQLARAFGAEVYA 197 (353)
T ss_dssp CTTCEEEESSTT--SHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCEEEEEcCC--CHHHHHHHHHHHHcCCEEEE
Confidence 344679999887 58999999999999999875
No 189
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=23.29 E-value=1.8e+02 Score=27.89 Aligned_cols=34 Identities=26% Similarity=0.338 Sum_probs=27.2
Q ss_pred CCCCCceEEEeccCCchhHHHHHHHHHhhcCcEeee
Q 011017 459 LPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVSF 494 (495)
Q Consensus 459 ip~~~~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~~ 494 (495)
+.++-+.|+.+|++ +=+|.+.+..+..+|.+|+.
T Consensus 146 ~~~g~~~VlV~Ga~--G~vG~~~~q~a~~~Ga~vi~ 179 (328)
T 1xa0_A 146 LTPERGPVLVTGAT--GGVGSLAVSMLAKRGYTVEA 179 (328)
T ss_dssp CCGGGCCEEESSTT--SHHHHHHHHHHHHTTCCEEE
T ss_pred CCCCCceEEEecCC--CHHHHHHHHHHHHCCCEEEE
Confidence 44443359999997 58999999999999999864
No 190
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=22.89 E-value=59 Score=35.29 Aligned_cols=30 Identities=20% Similarity=0.209 Sum_probs=26.7
Q ss_pred CCceEEEeccCCchhHHHHHHHHHhhcCcEeee
Q 011017 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVSF 494 (495)
Q Consensus 462 ~~~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~~ 494 (495)
...+|...|+. =.|-++|.+|.++|.+|+|
T Consensus 263 ~~~DVvIIGgG---iaGlsaA~~La~~G~~V~v 292 (689)
T 3pvc_A 263 RCDDIAIIGGG---IVSALTALALQRRGAVVTL 292 (689)
T ss_dssp CCSSEEEECCS---HHHHHHHHHHHTTTCCEEE
T ss_pred CCCCEEEECCc---HHHHHHHHHHHHCCCcEEE
Confidence 44689999997 6799999999999999987
No 191
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=22.67 E-value=1.7e+02 Score=28.04 Aligned_cols=34 Identities=26% Similarity=0.321 Sum_probs=27.2
Q ss_pred CCCCCceEEEeccCCchhHHHHHHHHHhhcCcEeee
Q 011017 459 LPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVSF 494 (495)
Q Consensus 459 ip~~~~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~~ 494 (495)
+.++-+.|+.+|++ +=+|.+.+..+..+|.+|+.
T Consensus 147 ~~~g~~~VlV~Ga~--G~vG~~~~q~a~~~Ga~vi~ 180 (330)
T 1tt7_A 147 LSPEKGSVLVTGAT--GGVGGIAVSMLNKRGYDVVA 180 (330)
T ss_dssp CCGGGCCEEEESTT--SHHHHHHHHHHHHHTCCEEE
T ss_pred cCCCCceEEEECCC--CHHHHHHHHHHHHCCCEEEE
Confidence 44443369999997 58999999999999998864
No 192
>4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A
Probab=22.65 E-value=91 Score=33.53 Aligned_cols=47 Identities=13% Similarity=0.048 Sum_probs=32.4
Q ss_pred CcceEEecCCchhh-HhhhhcCCCCCceEEEeccCCchhHHHHHHHHHhhcCc
Q 011017 439 KLKIKVVDGSSLAA-AVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGI 490 (495)
Q Consensus 439 ~l~~~vv~g~~l~~-a~v~~~ip~~~~~v~l~g~~~~~k~~~a~a~~lc~~~~ 490 (495)
+=-+.+|.|+.-.+ ..++. -++++.|.+||++ ++|+.|+....++..
T Consensus 256 ~Gvvnvv~g~g~~~g~~L~~--hp~v~~I~FTGSt---~vG~~i~~~aa~~lk 303 (563)
T 4e3x_A 256 PNIIQFVPADGPTFGDTVTS--SEHLCGINFTGSV---PTFKHLWRQVAQNLD 303 (563)
T ss_dssp TTSEEECCCCHHHHHHHHTT--CTTEEEEEEESCH---HHHHHHHHHHHHTTT
T ss_pred CCeEEEEeCCcHHHHHHHHh--CCCcCEEEEECCH---HHHHHHHHHHHhhCC
Confidence 33467787764332 22222 2478899999998 899999988877655
No 193
>3nio_A Guanidinobutyrase; PA1421, GBUA, hydrolase; HET: MLY; 2.00A {Pseudomonas aeruginosa} SCOP: c.42.1.0
Probab=22.60 E-value=89 Score=30.99 Aligned_cols=97 Identities=13% Similarity=0.132 Sum_probs=61.0
Q ss_pred hhhhhHHHHHHHHHHHHhcCCeEEEecc-----------ccccccccccceeeeccCCCCcce-----EEecCCchhhHh
Q 011017 391 RREAINSLIEEAILEADAKGVKVISLGL-----------LNQGEELNRNGEIYLERQPNKLKI-----KVVDGSSLAAAV 454 (495)
Q Consensus 391 ~~~~in~~ie~ai~~a~~~g~kv~sl~~-----------ln~~~~ln~~g~~~~~~~p~~l~~-----~vv~g~~l~~a~ 454 (495)
..+...+.|++++.+.-+.|...|.||= +.+.. .+=|-+.++.|+ |++. +.-||+-+.-|.
T Consensus 100 ~~~~~~~~i~~~v~~~l~~g~~pi~lGGdHsit~~~~~al~~~~--~~l~vI~~DAH~-Dl~~~~~g~~~~hG~~~~~~~ 176 (319)
T 3nio_A 100 NLLEAVRIIEQEYDRILGHGILPLTLGGDHTITLPILRAIXKXH--GXVGLVHVDAHA-DVNDHMFGEXIAHGTTFRRAV 176 (319)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHHHHHHH--CSEEEEEECSSC-CCCSCBTTBSCSTTTHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHCCCEEEEECCcchhhHHHHHHHHhhc--CceEEEEEecCc-ccCCCCCccccccccHHHHHh
Confidence 4567788999999999999999998872 33321 234678889999 8875 456776664443
Q ss_pred hhhcCCCCCceEEEeccCCchhHHHHHHHHHhhcCcEee
Q 011017 455 VVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVS 493 (495)
Q Consensus 455 v~~~ip~~~~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~ 493 (495)
++=.-+.++++..|--+. -....--.++-+.|+++.
T Consensus 177 --~~~~~~~~~~~~iGiR~~-~~~~~e~~~~~~~g~~~~ 212 (319)
T 3nio_A 177 --EEDLLDCDRVVQIGLRAQ-GYTAEDFNWSRXQGFRVV 212 (319)
T ss_dssp --HTTCEEEEEEEEEEECSE-ESSTHHHHHHHHHTCEEE
T ss_pred --hccCCCCCcEEEEEeCCC-CCCHHHHHHHHhcCcEEE
Confidence 321113467777776531 122333344555677664
No 194
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=22.20 E-value=71 Score=31.90 Aligned_cols=28 Identities=21% Similarity=0.305 Sum_probs=25.6
Q ss_pred ceEEEeccCCchhHHHHHHHHHhhcCcEeee
Q 011017 464 AHVLLRGTVTANKVANAVASSLCQMGIKVSF 494 (495)
Q Consensus 464 ~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~~ 494 (495)
+.|++.|+. .+|++++..|.+.|.+|.+
T Consensus 168 ~~VlViGaG---gvG~~aa~~a~~~Ga~V~v 195 (361)
T 1pjc_A 168 GKVVILGGG---VVGTEAAKMAVGLGAQVQI 195 (361)
T ss_dssp CEEEEECCS---HHHHHHHHHHHHTTCEEEE
T ss_pred CEEEEECCC---HHHHHHHHHHHhCCCEEEE
Confidence 789999995 8999999999999998875
No 195
>4ghk_A Gamma-glutamyl phosphate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.25A {Burkholderia thailandensis}
Probab=21.98 E-value=68 Score=33.20 Aligned_cols=40 Identities=13% Similarity=0.245 Sum_probs=24.3
Q ss_pred ceEEecCCch-hhHhhhhcCCCCCceEEEeccCCchhHHHHHHHH
Q 011017 441 KIKVVDGSSL-AAAVVVNSLPKTTAHVLLRGTVTANKVANAVASS 484 (495)
Q Consensus 441 ~~~vv~g~~l-~~a~v~~~ip~~~~~v~l~g~~~~~k~~~a~a~~ 484 (495)
-+.||.|..- .+...|.+ .++++.|++||.+ ++|++|+..
T Consensus 198 vv~vv~g~~~~~~~~~L~~-~p~vd~V~fTGs~---~vg~~v~~~ 238 (444)
T 4ghk_A 198 TVQVVETADRAAVGRLITM-TEYVDVIVPRGGK---SLIERLINE 238 (444)
T ss_dssp GEEECCCCCTHHHHHHTTC-TTTCSEEEECSCH---HHHHHHHHH
T ss_pred cEEEEeCCCHHHHHHHHhc-CCCccEEEEECcH---HHHHHHHHh
Confidence 3566776432 12222222 3478888999987 888888765
No 196
>1woh_A Agmatinase; alpha/beta fold, hydrolase; 1.75A {Deinococcus radiodurans} SCOP: c.42.1.1 PDB: 1wog_A 1woi_A
Probab=21.83 E-value=1.4e+02 Score=29.22 Aligned_cols=97 Identities=14% Similarity=0.130 Sum_probs=64.1
Q ss_pred chhhhhhHHHHHHHHHHHHhcCCeEEEecc-----------ccccccccccceeeeccCCCCcce-----EEecCCchhh
Q 011017 389 PWRREAINSLIEEAILEADAKGVKVISLGL-----------LNQGEELNRNGEIYLERQPNKLKI-----KVVDGSSLAA 452 (495)
Q Consensus 389 ~~~~~~in~~ie~ai~~a~~~g~kv~sl~~-----------ln~~~~ln~~g~~~~~~~p~~l~~-----~vv~g~~l~~ 452 (495)
+...+...+.|++++.+.-+.|...+.||= +.+. .+=|-+.++.|+ |++- +.-||+-+.-
T Consensus 90 ~~~~~~~~~~i~~~v~~~l~~g~~pi~lGGdHsit~~~~~a~~~~---~~~~vI~~DAH~-Dl~~~~~g~~~~hG~~~~~ 165 (305)
T 1woh_A 90 SLEPQLAHDRITEAARQVRGRCRVPVFLGGDHSVSYPLLRAFADV---PDLHVVQLDAHL-DFTDTRNDTKWSNSSPFRR 165 (305)
T ss_dssp SSCHHHHHHHHHHHHHHHHTTEEEEEEEESSGGGHHHHHGGGTTS---TTEEEEEECSSC-CCCSCBTTBSCSTTCHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHhCCCeEEEECCCccchHHHHHHHHhc---CCeEEEEEeCCc-ccCcccCCCCCCChhHHHH
Confidence 345678899999999999999999998872 2222 234678889999 8864 3567776665
Q ss_pred HhhhhcCCCCCceEEEeccCCchhHHHHHHHHHhhcCcEee
Q 011017 453 AVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVS 493 (495)
Q Consensus 453 a~v~~~ip~~~~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~ 493 (495)
|. .+.|. .++++..|--+. .-...-..++.+.|+++.
T Consensus 166 ~~--~~~~~-~~~~~~iGiR~~-~~~~~e~~~~~~~g~~~~ 202 (305)
T 1woh_A 166 AC--EALPN-LVHITTVGLRGL-RFDPEAVAAARARGHTII 202 (305)
T ss_dssp HH--HHCTT-EEEEEEEEECCS-CCCHHHHHHHHHTTCEEE
T ss_pred Hh--hccCC-CCcEEEEEeCCC-CCCHHHHHHHHHcCCeEE
Confidence 54 32343 337888887642 012344456667788764
No 197
>2h5g_A Delta 1-pyrroline-5-carboxylate synthetase; dehydrogenase, structural genomics, structural genomics CONS SGC, oxidoreductase; 2.25A {Homo sapiens}
Probab=21.75 E-value=48 Score=34.67 Aligned_cols=16 Identities=44% Similarity=0.540 Sum_probs=0.0
Q ss_pred cccccccccCCcchhh
Q 011017 160 HSHHHSSVVTEPITSV 175 (495)
Q Consensus 160 Hk~HHss~~p~p~ta~ 175 (495)
|..||++...+|.++.
T Consensus 3 ~~~~~~~~~~~P~tg~ 18 (463)
T 2h5g_A 3 HHHHHSSGVDLGTENL 18 (463)
T ss_dssp ----------------
T ss_pred ccccCcCCCcCCCCCC
Confidence 5678888888887764
No 198
>3szu_A ISPH, 4-hydroxy-3-methylbut-2-ENYL diphosphate reductas; 3Fe-4S iron-sulfur cluster, conserved cysteine, IPP and DMAP production final STEP; HET: H6P; 1.40A {Escherichia coli} PDB: 3szl_A* 3f7t_A* 3szo_A* 3t0f_A* 3t0g_A* 3urk_A* 3utc_A* 3utd_A* 3uv3_A* 3uv6_A* 3uv7_A* 3uwm_A* 3ke8_A* 3ke9_A* 3kef_A* 3kel_A 3kem_A*
Probab=21.69 E-value=1.3e+02 Score=30.46 Aligned_cols=76 Identities=13% Similarity=0.224 Sum_probs=46.1
Q ss_pred hhhHHHHHHHHHHHHhcCCeEEEecccccc----ccccccceeeeccCCCCcceEEecCCchhhHhhhhcCCCCCceEEE
Q 011017 393 EAINSLIEEAILEADAKGVKVISLGLLNQG----EELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLL 468 (495)
Q Consensus 393 ~~in~~ie~ai~~a~~~g~kv~sl~~ln~~----~~ln~~g~~~~~~~p~~l~~~vv~g~~l~~a~v~~~ip~~~~~v~l 468 (495)
-|+.|-||.|-..+++.|.+|..+|-+=-| +.|-.-|-.|| +. ++++|+|. -|++
T Consensus 25 ~GV~RAI~~ae~al~~~~~~iy~~g~IVHN~~Vv~~L~~~Gv~~v------------e~--------l~ev~~g~-~VIi 83 (328)
T 3szu_A 25 AGVDRAISIVENALAIYGAPIYVRHEVVHNRYVVDSLRERGAIFI------------EQ--------ISEVPDGA-ILIF 83 (328)
T ss_dssp HHHHHHHHHHHHHHHHHCSCEEEESCSSSCHHHHHHHHHTTEEEE------------SS--------GGGSCTTC-EEEE
T ss_pred ccHHHHHHHHHHHHHhcCCCEEEeCCCccCHHHHHHHHHCCCEEe------------cc--------hhhCCCCC-EEEE
Confidence 456777777766677788899999987554 34444455554 32 56777653 3444
Q ss_pred eccCCchhHHHHHHHHHhhcCcEee
Q 011017 469 RGTVTANKVANAVASSLCQMGIKVS 493 (495)
Q Consensus 469 ~g~~~~~k~~~a~a~~lc~~~~~v~ 493 (495)
+--. +..++-..+.+||++|+
T Consensus 84 rAHG----v~~~v~~~a~~rgl~ii 104 (328)
T 3szu_A 84 SAHG----VSQAVRNEAKSRDLTVF 104 (328)
T ss_dssp CTTC----CCHHHHHHHHHTTCEEE
T ss_pred ECCC----CCHHHHHHHHHCCCEEE
Confidence 4221 23455556666776653
No 199
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=21.68 E-value=77 Score=30.52 Aligned_cols=29 Identities=31% Similarity=0.406 Sum_probs=25.6
Q ss_pred CceEEEeccCCchhHHHHHHHHHhhcCcEeee
Q 011017 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVSF 494 (495)
Q Consensus 463 ~~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~~ 494 (495)
-+.|.+.|.. .+|+++|..|...|.+|++
T Consensus 155 g~~v~IiG~G---~iG~~~a~~l~~~G~~V~~ 183 (293)
T 3d4o_A 155 GANVAVLGLG---RVGMSVARKFAALGAKVKV 183 (293)
T ss_dssp TCEEEEECCS---HHHHHHHHHHHHTTCEEEE
T ss_pred CCEEEEEeeC---HHHHHHHHHHHhCCCEEEE
Confidence 3579999976 9999999999999999875
No 200
>1o20_A Gamma-glutamyl phosphate reductase; TM0293, structural genom JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: c.82.1.1
Probab=21.66 E-value=69 Score=32.95 Aligned_cols=43 Identities=9% Similarity=0.145 Sum_probs=25.1
Q ss_pred CcceEEecCC-chhhHhhhhcCCCCCceEEEeccCCchhHHHHHHHHH
Q 011017 439 KLKIKVVDGS-SLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSL 485 (495)
Q Consensus 439 ~l~~~vv~g~-~l~~a~v~~~ip~~~~~v~l~g~~~~~k~~~a~a~~l 485 (495)
+=-+.||.|. .=.+...|.+ .++++.|++||.+ ++|++|+...
T Consensus 184 ~gvv~vv~g~~~~~~~~~L~~-~~~v~~I~fTGS~---~~G~~i~~~a 227 (427)
T 1o20_A 184 ESSVEFIENTDRSLVLEMIRL-REYLSLVIPRGGY---GLISFVRDNA 227 (427)
T ss_dssp GGGEEECCCCCTHHHHHHTTC-TTTCSEEEECSCH---HHHHHHHHHC
T ss_pred cccEEEecCCChHHHHHHHhC-CCCccEEEeCCCh---HHHHHHHHhc
Confidence 3346677763 2112222222 2368888899987 7888887653
No 201
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=21.52 E-value=40 Score=35.95 Aligned_cols=31 Identities=23% Similarity=0.285 Sum_probs=27.0
Q ss_pred CCCceEEEeccCCchhHHHHHHHHHhhcCcEeee
Q 011017 461 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVSF 494 (495)
Q Consensus 461 ~~~~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~~ 494 (495)
+...+|...|+. =.|-++|..|.+||.+|++
T Consensus 30 ~~~~DVvVIGgG---i~G~~~A~~La~rG~~V~L 60 (571)
T 2rgh_A 30 QEELDLLIIGGG---ITGAGVAVQAAASGIKTGL 60 (571)
T ss_dssp HSCBSEEEECCS---HHHHHHHHHHHHTTCCEEE
T ss_pred cCCCCEEEECcC---HHHHHHHHHHHHCCCcEEE
Confidence 345689999997 6899999999999999986
No 202
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=21.52 E-value=1.9e+02 Score=27.52 Aligned_cols=61 Identities=16% Similarity=0.212 Sum_probs=40.0
Q ss_pred eeeccCCCCcceEEecCCchhhHh-----------hhhc-----CCCCCceEEEeccCCchhHHHHHHHHHhhcCcEeee
Q 011017 431 IYLERQPNKLKIKVVDGSSLAAAV-----------VVNS-----LPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVSF 494 (495)
Q Consensus 431 ~~~~~~p~~l~~~vv~g~~l~~a~-----------v~~~-----ip~~~~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~~ 494 (495)
=|+.-.. +.=+++=++-+...|+ -++. +.++-.+|+.+|++ +-+|.+.+..+..+|.+|+.
T Consensus 100 ey~~v~~-~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~~g~VlV~Ga~--G~vG~~aiqla~~~Ga~Vi~ 176 (324)
T 3nx4_A 100 ERARVKG-DWLVALPAGLSSRNAMIIGTAGFTAMLCVMALEDAGIRPQDGEVVVTGAS--GGVGSTAVALLHKLGYQVAA 176 (324)
T ss_dssp SEEEECG-GGCEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEESSTT--SHHHHHHHHHHHHTTCCEEE
T ss_pred eEEecCH-HHcEECCCCCCHHHHHHhhhHHHHHHHHHHHhhhcccCCCCCeEEEECCC--cHHHHHHHHHHHHcCCEEEE
Confidence 3444444 5556666776654433 2332 22232239999998 58999999999999999875
No 203
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=21.50 E-value=57 Score=34.78 Aligned_cols=29 Identities=24% Similarity=0.231 Sum_probs=25.4
Q ss_pred CceEEEeccCCchhHHHHHHHHHhhcCcEeee
Q 011017 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVSF 494 (495)
Q Consensus 463 ~~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~~ 494 (495)
..+|...|+. =.|-+.|..|.++|++|++
T Consensus 49 ~~DVvIVGaG---~aGL~~A~~La~~G~~V~V 77 (570)
T 3fmw_A 49 TTDVVVVGGG---PVGLMLAGELRAGGVGALV 77 (570)
T ss_dssp --CEEEECCS---HHHHHHHHHHHHTTCCEEE
T ss_pred CCCEEEECcC---HHHHHHHHHHHHCCCCEEE
Confidence 4589999997 7899999999999999986
No 204
>2dx6_A Hypothetical protein TTHA0132; conserved hypothetical protein, structural genomics, NPPSFA; 1.78A {Thermus thermophilus} PDB: 3v45_A
Probab=21.46 E-value=2.2e+02 Score=24.92 Aligned_cols=59 Identities=22% Similarity=0.231 Sum_probs=42.3
Q ss_pred cceeEeeccccCcccceeEEeeccCceeccchhhhhhHHHHHHHHHHHHhcCCeEEEecccccc
Q 011017 359 GRTFVSESNTLDKLKLQTWVVPRYIVQYNLPWRREAINSLIEEAILEADAKGVKVISLGLLNQG 422 (495)
Q Consensus 359 ~~~f~~~~~~~~~~~~~~w~~pr~~~~y~~~~~~~~in~~ie~ai~~a~~~g~kv~sl~~ln~~ 422 (495)
|+..+.+.++|.-...--=+-|+|+ +.+.+.+.+-++++...|++.|.|-|.+-++.-+
T Consensus 58 G~a~it~~~~L~~~~Vih~vgp~~~-----~~~~~~L~~~~~~~L~~a~~~~~~sIa~P~igtG 116 (159)
T 2dx6_A 58 GEAAVTGAGNLPVRYVIHAAVLGDE-----PASLETVRKATKSALEKAVELGLKTVAFPLLGTG 116 (159)
T ss_dssp TCEEEEECTTSSSSEEEEEEEESSS-----CCCHHHHHHHHHHHHHHHHHTTCSEEEECCTTSS
T ss_pred CcEEEecCCCCCCCEEEEEeCCCCC-----CchHHHHHHHHHHHHHHHHHcCCcEEEECCccCC
Confidence 5667777777653222222347766 3467788888888888999999999999888655
No 205
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=21.31 E-value=59 Score=32.41 Aligned_cols=32 Identities=19% Similarity=0.272 Sum_probs=27.3
Q ss_pred CCCCceEEEeccCCchhHHHHHHHHHhhc--CcEeee
Q 011017 460 PKTTAHVLLRGTVTANKVANAVASSLCQM--GIKVSF 494 (495)
Q Consensus 460 p~~~~~v~l~g~~~~~k~~~a~a~~lc~~--~~~v~~ 494 (495)
++...+|...|+. =.|-++|.+|.|+ |.+|++
T Consensus 33 ~~~~~dVvIIGaG---i~Gls~A~~La~~~pG~~V~v 66 (405)
T 3c4n_A 33 TEEAFDIVVIGAG---RMGAACAFYLRQLAPGRSLLL 66 (405)
T ss_dssp -CCEEEEEEECCS---HHHHHHHHHHHHHCTTSCEEE
T ss_pred CcCcCCEEEECCc---HHHHHHHHHHHhcCCCCeEEE
Confidence 3445689999997 6899999999999 999986
No 206
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=21.30 E-value=79 Score=27.28 Aligned_cols=31 Identities=23% Similarity=0.291 Sum_probs=24.8
Q ss_pred CceEEEeccCCc-hhHHHHHHHHHhhcCcEee
Q 011017 463 TAHVLLRGTVTA-NKVANAVASSLCQMGIKVS 493 (495)
Q Consensus 463 ~~~v~l~g~~~~-~k~~~a~a~~lc~~~~~v~ 493 (495)
.+.|-+.|+++- +|+|++++.+|.+.|.+|.
T Consensus 14 p~~IavIGaS~~~g~~G~~~~~~L~~~G~~V~ 45 (138)
T 1y81_A 14 FRKIALVGASKNPAKYGNIILKDLLSKGFEVL 45 (138)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEE
T ss_pred CCeEEEEeecCCCCCHHHHHHHHHHHCCCEEE
Confidence 466888898421 3899999999999999864
No 207
>3iwh_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics, C structural genomics of infectious diseases, csgid; 2.00A {Staphylococcus aureus subsp} PDB: 3mzz_A
Probab=21.13 E-value=1.1e+02 Score=24.95 Aligned_cols=35 Identities=20% Similarity=0.137 Sum_probs=25.9
Q ss_pred hhcCCCCCceEEEeccCCchhHHHHHHHHHhhcCcEee
Q 011017 456 VNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVS 493 (495)
Q Consensus 456 ~~~ip~~~~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~ 493 (495)
++++|++.+=|+.+... .-+...|..|.+.|+++.
T Consensus 50 ~~~l~~~~~ivv~C~~G---~rS~~aa~~L~~~G~~~~ 84 (103)
T 3iwh_A 50 LNSFNKNEIYYIVCAGG---VRSAKVVEYLEANGIDAV 84 (103)
T ss_dssp GGGCCTTSEEEEECSSS---SHHHHHHHHHHTTTCEEE
T ss_pred hhhhcCCCeEEEECCCC---HHHHHHHHHHHHcCCCEE
Confidence 57789888777887554 335556789999999875
No 208
>3sl1_A Arginase; metallohydrolase, hydrolase-hydrolase inhibit complex; HET: FB6; 1.90A {Plasmodium falciparum} PDB: 3mmr_A* 3sl0_A*
Probab=20.89 E-value=1.3e+02 Score=31.50 Aligned_cols=99 Identities=12% Similarity=0.049 Sum_probs=66.7
Q ss_pred chhhhhhHHHHHHHHHHHHhcCCeEEEec-----------cccccccccccceeeeccCCCCcce------EEecCCchh
Q 011017 389 PWRREAINSLIEEAILEADAKGVKVISLG-----------LLNQGEELNRNGEIYLERQPNKLKI------KVVDGSSLA 451 (495)
Q Consensus 389 ~~~~~~in~~ie~ai~~a~~~g~kv~sl~-----------~ln~~~~ln~~g~~~~~~~p~~l~~------~vv~g~~l~ 451 (495)
+.+-+..++.|++++.++-+.|...|.|| ++.+.. .+=|-+.++.|+ |++. .-.||..++
T Consensus 164 ~~~v~~~~~~L~~~V~~il~~G~~PIvLGGDHSIalg~i~ala~~~--~~lgVI~fDAH~-Dlrtpe~s~SGn~hG~pls 240 (413)
T 3sl1_A 164 IKEIGIFSKNLFDTMSNELRKKNFVLNIGGDHGVAFSSILSSLQMY--QNLRVIWIDAHG-DINIPETSPSGNYHGMTLA 240 (413)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTCEEEEEESSGGGHHHHHHHHHHHC--TTCEEEEECSSC-CCCCTTTCSSCCGGGTHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCEEEEECCchHhHHHHHHHHHHhC--CCceEEEecCcc-ccCCcccCCCCCcCCCHHH
Confidence 56777889999999999999999999886 222221 133788899999 9886 357888888
Q ss_pred hHhhhh--cC---------CC-CCceEEEeccCCchhHHHHHHHHHhhcCcEee
Q 011017 452 AAVVVN--SL---------PK-TTAHVLLRGTVTANKVANAVASSLCQMGIKVS 493 (495)
Q Consensus 452 ~a~v~~--~i---------p~-~~~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~ 493 (495)
.|..+. .+ |. +.+.++..|.-+.++ .-..++-+.|+++.
T Consensus 241 ~alg~~~~~~~~f~~~~~~~~l~p~~vv~IGIRs~d~---eE~e~~~~~Gi~v~ 291 (413)
T 3sl1_A 241 HTLGLFKKKVPYFEWSENLTYLKPENTAIIGIRDIDA---YEKIILKKCNINYY 291 (413)
T ss_dssp HHTTCCCSBCTTCGGGTTSCCCCGGGEEEEEECCCCH---HHHHHHHHTTCEEE
T ss_pred HHHhcccccccccchhccccccCcceEEEEEcCCCCH---HHHHHHHHcCCEEE
Confidence 777642 12 22 456788888775432 22334445566653
No 209
>1gq6_A Proclavaminate amidino hydrolase; clavaminic, PAH, arginase, antibioti; 1.75A {Streptomyces clavuligerus} SCOP: c.42.1.1 PDB: 1gq7_A
Probab=20.88 E-value=92 Score=30.65 Aligned_cols=97 Identities=7% Similarity=0.036 Sum_probs=59.3
Q ss_pred hhhhhHHHHHHHHHHHHhcCCeEEEecc-----------ccccccccccceeeeccCCCCcce-----EEecCCchhhHh
Q 011017 391 RREAINSLIEEAILEADAKGVKVISLGL-----------LNQGEELNRNGEIYLERQPNKLKI-----KVVDGSSLAAAV 454 (495)
Q Consensus 391 ~~~~in~~ie~ai~~a~~~g~kv~sl~~-----------ln~~~~ln~~g~~~~~~~p~~l~~-----~vv~g~~l~~a~ 454 (495)
..+...+.|++++.+.-+.|.+.|.||= +.+.. .+=|-+.++.|+ |++. +.-||+-+.-|.
T Consensus 92 ~~~~~~~~i~~~v~~~l~~g~~pi~lGGdHsit~~~~~a~~~~~--~~~~vI~~DAH~-Dl~~~~~g~~~~hG~~~~~~~ 168 (313)
T 1gq6_A 92 DMNIAIDTAQSHLSGLLKANAAFLMIGGDHSLTVAALRAVAEQH--GPLAVVHLDAHS-DTNPAFYGGRYHHGTPFRHGI 168 (313)
T ss_dssp CHHHHHHHHHHHHHHHHHHSSEEEEEESCGGGHHHHHHHHHHHH--SSEEEEEECSSC-CCCCCBTTBTTCTTCHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHhCCCEEEEeCCcchhhHHHHHHHHHHc--CCeEEEEEeCCC-cCCCccCCCCCcCcCHHHHhh
Confidence 4567789999999999999999999872 22211 244678889999 8874 456777666554
Q ss_pred hhhcCCCCCceEEEeccCCchhHHHHHHHHHhhcCcEee
Q 011017 455 VVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVS 493 (495)
Q Consensus 455 v~~~ip~~~~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~ 493 (495)
- +=+-+.++++..|--+ +.....--.++.+.|+++.
T Consensus 169 ~--~~~~~~~~~~~iGiR~-~~~~~~e~~~~~~~g~~~~ 204 (313)
T 1gq6_A 169 D--EKLIDPAAMVQIGIRG-HNPKPDSLDYARGHGVRVV 204 (313)
T ss_dssp H--TTSEEEEEEEEEEECC-C------CHHHHHTTCEEE
T ss_pred h--ccCCCCCcEEEEEecC-CCCCHHHHHHHHHcCCEEE
Confidence 2 1112345677777652 1133333445556676654
No 210
>4a8p_A Putrescine carbamoyltransferase; ornithine agmatine deiminase route; HET: PAO; 2.00A {Enterococcus faecalis} PDB: 4a8h_A* 3txx_A
Probab=20.55 E-value=3e+02 Score=28.01 Aligned_cols=87 Identities=23% Similarity=0.319 Sum_probs=63.9
Q ss_pred HHhcCCeEEEecc----ccccccc-------cccceeeeccCCC---------CcceEEecCCc--------hh-hHhhh
Q 011017 406 ADAKGVKVISLGL----LNQGEEL-------NRNGEIYLERQPN---------KLKIKVVDGSS--------LA-AAVVV 456 (495)
Q Consensus 406 a~~~g~kv~sl~~----ln~~~~l-------n~~g~~~~~~~p~---------~l~~~vv~g~~--------l~-~a~v~ 456 (495)
+.+.|..|+.|+. ++|+|.| ++..-..|-|||. ..+|=|++|-+ |+ .-.|.
T Consensus 63 ~~~LGg~vi~l~~~~ssl~kgEsl~DTarvLs~y~D~IviR~~~~~~~~~lA~~~~vPVINag~~~~HPtQaLaDl~TI~ 142 (355)
T 4a8p_A 63 MEQLGGHGEYLAPGQIQLGGHETIEDTSRVLSRLVDILMARVERHHSIVDLANCATIPVINGMSDYNHPTQELGDLCTMV 142 (355)
T ss_dssp HHHTTCEEEEECBTTBCBTTTBCHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHCSSCEEECCCSSCCHHHHHHHHHHHH
T ss_pred HHHcCCeEEEeCcccccCCCCcCHHHHHHHHHHhCCEEEEecCcHHHHHHHHHhCCCCEEeCCCCCCCcHHHHHHHHHHH
Confidence 4568999999974 6677764 4556677889982 35678999855 11 23466
Q ss_pred hcCCCC----CceEEEeccCCchhHHHHHHHHHhhcCcEeee
Q 011017 457 NSLPKT----TAHVLLRGTVTANKVANAVASSLCQMGIKVSF 494 (495)
Q Consensus 457 ~~ip~~----~~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~~ 494 (495)
.+.|+| -..|-+.|.. |-+++..+..|++-|++|.+
T Consensus 143 E~~~~G~~l~glkva~vGD~--~rva~Sl~~~~~~~G~~v~~ 182 (355)
T 4a8p_A 143 EHLPEGKKLEDCKVVFVGDA--TQVCFSLGLITTKMGMNFVH 182 (355)
T ss_dssp HTCCTTCCGGGCEEEEESCC--CHHHHHHHHHHHHTTCEEEE
T ss_pred HHhhcCCCCCCCEEEEECCC--chhHHHHHHHHHHcCCEEEE
Confidence 666532 2478899998 69999999999999999875
No 211
>1umk_A B5R, NADH-cytochrome B5 reductase; flavoprotein, beta barrel, FAD-binding domain, NADH-binding domain, oxidoreductase; HET: FAD; 1.75A {Homo sapiens} SCOP: b.43.4.2 c.25.1.1 PDB: 1ndh_A* 1i7p_A* 1ib0_A* 1qx4_A*
Probab=20.45 E-value=67 Score=30.15 Aligned_cols=39 Identities=21% Similarity=0.336 Sum_probs=27.2
Q ss_pred hhhHhhhhcCCC--CCceEEEeccCCchhHHH-HHHHHHhhcCcE
Q 011017 450 LAAAVVVNSLPK--TTAHVLLRGTVTANKVAN-AVASSLCQMGIK 491 (495)
Q Consensus 450 l~~a~v~~~ip~--~~~~v~l~g~~~~~k~~~-a~a~~lc~~~~~ 491 (495)
++.+.+-+.+|. +..+|+++|.. .+.+ ++..+|.++|+.
T Consensus 227 v~~~~l~~~l~~~~~~~~vyvCGp~---~m~~~~v~~~L~~~G~~ 268 (275)
T 1umk_A 227 VNEEMIRDHLPPPEEEPLVLMCGPP---PMIQYACLPNLDHVGHP 268 (275)
T ss_dssp CCHHHHHHHSCCGGGCCEEEEESCH---HHHHHTTHHHHHHHTCC
T ss_pred cCHHHHHHhcCCCCCCeEEEEECCH---HHHHHHHHHHHHHcCCC
Confidence 444444445554 45689999997 5667 788888888873
No 212
>3rss_A Putative uncharacterized protein; unknown function, ADP/ATP-dependent NAD(P)H-hydrate dehydrat lyase; HET: NAP; 1.95A {Thermotoga maritima} PDB: 3rrb_A* 2ax3_A* 3rre_A* 3rrj_A* 3rs8_A* 3rs9_A* 3rsf_A* 3rsg_A* 3rrf_A* 3rsq_A* 3rt7_A* 3rt9_A* 3rta_A* 3rtb_A* 3rtc_A* 3rtd_A* 3rte_A* 3rtg_A* 3ru2_A* 3ru3_A*
Probab=20.38 E-value=65 Score=34.25 Aligned_cols=41 Identities=17% Similarity=0.072 Sum_probs=28.2
Q ss_pred hhhhcCC--CCCceEEEeccCCchhHHHHHHHHHhhcCcEeee
Q 011017 454 VVVNSLP--KTTAHVLLRGTVTANKVANAVASSLCQMGIKVSF 494 (495)
Q Consensus 454 ~v~~~ip--~~~~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~~ 494 (495)
.|.+..| ++.+=++|+|..+-.==|.++|.+|+++|++|.+
T Consensus 42 ~i~~~~~~~~~~~v~VlcG~GNNGGDGlv~AR~L~~~G~~V~v 84 (502)
T 3rss_A 42 AMEEELGNLSDYRFLVLCGGGNNGGDGFVVARNLLGVVKDVLV 84 (502)
T ss_dssp HHHHHHSCCTTCEEEEEECSSHHHHHHHHHHHHHTTTSSEEEE
T ss_pred HHHHhcCccCCCEEEEEECCCCCHHHHHHHHHHHHHCCCeEEE
Confidence 3455556 3444567888753234578899999999999865
No 213
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=20.37 E-value=85 Score=30.26 Aligned_cols=29 Identities=17% Similarity=0.331 Sum_probs=25.5
Q ss_pred CceEEEeccCCchhHHHHHHHHHhhcCcEeee
Q 011017 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVSF 494 (495)
Q Consensus 463 ~~~v~l~g~~~~~k~~~a~a~~lc~~~~~v~~ 494 (495)
-+.|.+.|.. .+|+++|..|.+.|.+|.+
T Consensus 157 g~~v~IiG~G---~iG~~~a~~l~~~G~~V~~ 185 (300)
T 2rir_A 157 GSQVAVLGLG---RTGMTIARTFAALGANVKV 185 (300)
T ss_dssp TSEEEEECCS---HHHHHHHHHHHHTTCEEEE
T ss_pred CCEEEEEccc---HHHHHHHHHHHHCCCEEEE
Confidence 3579999986 9999999999999999875
No 214
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=20.19 E-value=86 Score=30.40 Aligned_cols=43 Identities=26% Similarity=0.373 Sum_probs=30.2
Q ss_pred cCCchhhHhhhhcCCCCCceEEEeccCCchhHHHHHHHHHhhcCcE
Q 011017 446 DGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIK 491 (495)
Q Consensus 446 ~g~~l~~a~v~~~ip~~~~~v~l~g~~~~~k~~~a~a~~lc~~~~~ 491 (495)
||..+..+.--+.+...-+.|++.|+. =-||||+.+|.+.|++
T Consensus 108 D~~Gf~~~L~~~g~~~~~~~~lilGaG---Gaarai~~aL~~~g~~ 150 (269)
T 3tum_A 108 DGAGFLGAAHKHGFEPAGKRALVIGCG---GVGSAIAYALAEAGIA 150 (269)
T ss_dssp HHHHHHHHHHHTTCCCTTCEEEEECCS---HHHHHHHHHHHHTTCS
T ss_pred ChHHHHHHHHHhCCCcccCeEEEEecH---HHHHHHHHHHHHhCCC
Confidence 444454444334455456789999998 4589999999999974
No 215
>4fvg_A Stomatin; mixed alpha-beta fold, membrane scaffold, membrane protein; 1.80A {Mus musculus} PDB: 4fvj_A 4fvf_A
Probab=20.14 E-value=71 Score=27.37 Aligned_cols=28 Identities=25% Similarity=0.384 Sum_probs=24.4
Q ss_pred hhhhhHHHHHHHHH-HHHhcCCeEEEecc
Q 011017 391 RREAINSLIEEAIL-EADAKGVKVISLGL 418 (495)
Q Consensus 391 ~~~~in~~ie~ai~-~a~~~g~kv~sl~~ 418 (495)
+++.||..|.+.+. .+++.|++|.+..+
T Consensus 86 ~r~~i~~~i~~~l~~~~~~~GI~V~~V~i 114 (133)
T 4fvg_A 86 DREEIAHHMQSTLDDATDDWGIKVERVEI 114 (133)
T ss_dssp CHHHHHHHHHHHHHHHHGGGTEEEEEEEE
T ss_pred hHHHHHHHHHHHHHHHHhcCCEEEEEEEE
Confidence 57789999999988 68999999998765
Done!