BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 011026
(495 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1DJG|A Chain A, Phosphoinositide-Specific Phospholipase C-Delta1 From Rat
Complexed With Lanthanum
pdb|1DJG|B Chain B, Phosphoinositide-Specific Phospholipase C-Delta1 From Rat
Complexed With Lanthanum
pdb|1DJH|A Chain A, Phosphoinositide-Specific Phospholipase C-Delta1 From Rat
Complexed With Barium
pdb|1DJH|B Chain B, Phosphoinositide-Specific Phospholipase C-Delta1 From Rat
Complexed With Barium
pdb|1DJI|A Chain A, Phosphoinositide-Specific Phospholipase C-Delta1 From Rat
Complexed With Calcium
pdb|1DJI|B Chain B, Phosphoinositide-Specific Phospholipase C-Delta1 From Rat
Complexed With Calcium
pdb|1DJW|A Chain A, Phosphoinositide-Specific Phospholipase C-Delta1 From Rat
Complexed With Inositol-2-Methylene-1,2-Cyclic-
Monophosphonate
pdb|1DJW|B Chain B, Phosphoinositide-Specific Phospholipase C-Delta1 From Rat
Complexed With Inositol-2-Methylene-1,2-Cyclic-
Monophosphonate
pdb|1DJX|A Chain A, Phosphoinositide-Specific Phospholipase C-Delta1 From Rat
Complexed With Inositol-1,4,5-Trisphosphate
pdb|1DJX|B Chain B, Phosphoinositide-Specific Phospholipase C-Delta1 From Rat
Complexed With Inositol-1,4,5-Trisphosphate
pdb|1DJY|A Chain A, Phosphoinositide-Specific Phospholipase C-Delta1 From Rat
Complexed With Inositol-2,4,5-Trisphosphate
pdb|1DJY|B Chain B, Phosphoinositide-Specific Phospholipase C-Delta1 From Rat
Complexed With Inositol-2,4,5-Trisphosphate
pdb|1DJZ|A Chain A, Phosphoinositide-Specific Phospholipase C-Delta1 From Rat
Complexed With Inositol-4,5-Bisphosphate
pdb|1DJZ|B Chain B, Phosphoinositide-Specific Phospholipase C-Delta1 From Rat
Complexed With Inositol-4,5-Bisphosphate
pdb|2ISD|A Chain A, Phosphoinositide-Specific Phospholipase C-Delta1 From Rat
pdb|2ISD|B Chain B, Phosphoinositide-Specific Phospholipase C-Delta1 From Rat
Length = 624
Score = 169 bits (429), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 130/417 (31%), Positives = 201/417 (48%), Gaps = 30/417 (7%)
Query: 24 DVKEAFNKYAEGGTHMTAEQLRRFLLEVQGDDGGSISDAEKVVDQVLKTRHHLAKFTRHT 83
++ AF + A ++ E+L FL Q ++ + A ++++ + AK R
Sbjct: 81 EIDRAFEEAAGSAETLSVERLVTFLQHQQREEEAGPALALSLIERYEPS--ETAKAQRQ- 137
Query: 84 LTLDDFHHYLFSSDLNP-PINYDQVHQDMTAPLSHYFIYTGHNSYLTGNQLSSDCSDVPI 142
+T D F YL S+D N + + +V+QDM PLSHY + + HN+YL +QL+ S
Sbjct: 138 MTKDGFLMYLLSADGNAFSLAHRRVYQDMDQPLSHYLVSSSHNTYLLEDQLTGPSSTEAY 197
Query: 143 IKALKRGVRVVELDIWPNSTKDDVHVLHGRTLTTPVELMKCLKSIKEHAFSASPYPVVIT 202
I+AL +G R +ELD W ++ + + HG T T+ + L++I+++AF ASPYPV+++
Sbjct: 198 IRALCKGCRCLELDCWDGPNQEPI-IYHGYTFTSKILFCDVLRAIRDYAFKASPYPVILS 256
Query: 203 LEDHLTPHLQAKVAKMLAETFGDMLF-VPQCECLQEFPSPEELKYKIIISTKPPKEYLKA 261
LE+H + Q +A+ L G +L P PSPE+LK KI++ K L A
Sbjct: 257 LENHCSLEQQRVMARHLRAILGPILLDQPLDGVTTSLPSPEQLKGKILLKGKKLGGLLPA 316
Query: 262 ESKDGTR----SNSVKARDSDDDEWGKEPQDLTADQEDETKSDSDISDENEAYDNERPLE 317
++G+ S+ V+A + +D+ + Q +ED+ K ++SD
Sbjct: 317 GGENGSEATDVSDEVEAAEMEDEAVRSQVQH--KPKEDKLKLVPELSD------------ 362
Query: 318 AADYKRLIAIHAGKPKGGLKDVLKVEPDKVRRLSLSEQTLEKAAESHGTDLVRFTQKNIL 377
+I GG S SE + + G VR +
Sbjct: 363 ------MIIYCKSVHFGGFSSPGTSGQAFYEMASFSESRALRLLQESGNGFVRHNVSCLS 416
Query: 378 RIYPKGTRFTSSNYKPLVGWMHGTQMVAFNMQGYGRAMWLMHGMFRSNGGCGYVKKP 434
RIYP G R SSNY P+ W G Q+VA N Q G M + G F+ NGGCGYV KP
Sbjct: 417 RIYPAGWRTDSSNYSPVEMWNGGCQIVALNFQTPGPEMDVYLGCFQDNGGCGYVLKP 473
>pdb|1QAS|A Chain A, 1-Phosphatidylinositol-4,5-Bisphosphate Phosphodiesterase
Delta 1
pdb|1QAS|B Chain B, 1-Phosphatidylinositol-4,5-Bisphosphate Phosphodiesterase
Delta 1
pdb|1QAT|A Chain A, 1-Phosphatidylinositol-4,5-Bisphosphate Phosphodiesterase
Delta Complex With Samarium (Iii) Chloride
pdb|1QAT|B Chain B, 1-Phosphatidylinositol-4,5-Bisphosphate Phosphodiesterase
Delta Complex With Samarium (Iii) Chloride
Length = 622
Score = 169 bits (429), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 130/417 (31%), Positives = 201/417 (48%), Gaps = 30/417 (7%)
Query: 24 DVKEAFNKYAEGGTHMTAEQLRRFLLEVQGDDGGSISDAEKVVDQVLKTRHHLAKFTRHT 83
++ AF + A ++ E+L FL Q ++ + A ++++ + AK R
Sbjct: 79 EIDRAFEEAAGSAETLSVERLVTFLQHQQREEEAGPALALSLIERYEPS--ETAKAQRQ- 135
Query: 84 LTLDDFHHYLFSSDLNP-PINYDQVHQDMTAPLSHYFIYTGHNSYLTGNQLSSDCSDVPI 142
+T D F YL S+D N + + +V+QDM PLSHY + + HN+YL +QL+ S
Sbjct: 136 MTKDGFLMYLLSADGNAFSLAHRRVYQDMDQPLSHYLVSSSHNTYLLEDQLTGPSSTEAY 195
Query: 143 IKALKRGVRVVELDIWPNSTKDDVHVLHGRTLTTPVELMKCLKSIKEHAFSASPYPVVIT 202
I+AL +G R +ELD W ++ + + HG T T+ + L++I+++AF ASPYPV+++
Sbjct: 196 IRALCKGCRCLELDCWDGPNQEPI-IYHGYTFTSKILFCDVLRAIRDYAFKASPYPVILS 254
Query: 203 LEDHLTPHLQAKVAKMLAETFGDMLF-VPQCECLQEFPSPEELKYKIIISTKPPKEYLKA 261
LE+H + Q +A+ L G +L P PSPE+LK KI++ K L A
Sbjct: 255 LENHCSLEQQRVMARHLRAILGPILLDQPLDGVTTSLPSPEQLKGKILLKGKKLGGLLPA 314
Query: 262 ESKDGTR----SNSVKARDSDDDEWGKEPQDLTADQEDETKSDSDISDENEAYDNERPLE 317
++G+ S+ V+A + +D+ + Q +ED+ K ++SD
Sbjct: 315 GGENGSEATDVSDEVEAAEMEDEAVRSQVQH--KPKEDKLKLVPELSD------------ 360
Query: 318 AADYKRLIAIHAGKPKGGLKDVLKVEPDKVRRLSLSEQTLEKAAESHGTDLVRFTQKNIL 377
+I GG S SE + + G VR +
Sbjct: 361 ------MIIYCKSVHFGGFSSPGTSGQAFYEMASFSESRALRLLQESGNGFVRHNVSCLS 414
Query: 378 RIYPKGTRFTSSNYKPLVGWMHGTQMVAFNMQGYGRAMWLMHGMFRSNGGCGYVKKP 434
RIYP G R SSNY P+ W G Q+VA N Q G M + G F+ NGGCGYV KP
Sbjct: 415 RIYPAGWRTDSSNYSPVEMWNGGCQIVALNFQTPGPEMDVYLGCFQDNGGCGYVLKP 471
>pdb|2FJU|B Chain B, Activated Rac1 Bound To Its Effector Phospholipase C Beta
2
pdb|2ZKM|X Chain X, Crystal Structure Of Phospholipase C Beta 2
Length = 799
Score = 159 bits (402), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 151/525 (28%), Positives = 224/525 (42%), Gaps = 108/525 (20%)
Query: 3 SYRMCVCFTRKFRVTEAGPPEDVKEAFNKY-AEGGTHMTAEQLRRFLLEVQGDDG-GSIS 60
S+ M +C P ++ E F Y A+ +MT E L +F+ + Q D S+
Sbjct: 210 SFLMSLC-----------PRPEIDEIFTSYHAKAKPYMTKEHLTKFINQKQRDSRLNSLL 258
Query: 61 DAEKVVDQV--LKTRHHLAKFT--RHTLTLDDFHHYLFSSDLNPPINYDQV--HQDMTAP 114
DQV L ++ + R L+ + +L + N + D++ H DMT P
Sbjct: 259 FPPARPDQVQGLIDKYEPSGINAQRGQLSPEGMVWFLCGPE-NSVLAQDKLLLHHDMTQP 317
Query: 115 LSHYFIYTGHNSYLTGNQLSSDCSDVPIIKALKRGVRVVELDIWPNSTKDDVHVL-HGRT 173
L+HYFI + HN+YLT Q S S + L G R VELD W D+ ++ HG T
Sbjct: 318 LNHYFINSSHNTYLTAGQFSGLSSAEMYRQVLLSGCRCVELDCWKGKPPDEEPIITHGFT 377
Query: 174 LTTPVELMKCLKSIKEHAFSASPYPVVITLEDHL-TPHLQAKVAKMLAETFGDMLFVPQC 232
+TT + + +++I E AF SPYP++++ E+H+ +P QAK+A+ FGDML
Sbjct: 378 MTTDIFFKEAIEAIAESAFKTSPYPIILSFENHVDSPRQQAKMAEYCRTIFGDMLLT--- 434
Query: 233 ECLQEF--------PSPEELKYKIIISTKPPKEYLKAESKDGTRSNSVKARDSDDDEWGK 284
E L++F PSPE+L+ KI+I K K+ + ++D+ + G
Sbjct: 435 EPLEKFPLKPGVPLPSPEDLRGKILIKNK----------KNQFSGPTSSSKDTGGEAEGS 484
Query: 285 EPQDLTA--------------------------DQEDETKSDSDISDENEAYDNERPLEA 318
P A D+E+ K SD + LE
Sbjct: 485 SPPSAPAVWAGEEGTELEEEEVEEEEEEESGNLDEEEIKKMQSD--------EGTAGLEV 536
Query: 319 ADYKRLIAIHAGKPKGGLKDVLKVEPDKVRRLSLSEQTLEKAAESHGTDL---------- 368
Y+ + ++ V ++P K S Q S T+L
Sbjct: 537 TAYEEMSSL-----------VNYIQPTKFVSFEFSAQKNRSYVISSFTELKAYDLLSKAS 585
Query: 369 ---VRFTQKNILRIYPKGTRFTSSNYKPLVGWMHGTQMVAFNMQGYGRAMWLMHGMFRSN 425
V + ++ + RIYPKGTR SSNY P + W G QMVA N Q M +F N
Sbjct: 586 VQFVDYNKRQMSRIYPKGTRMDSSNYMPQMFWNAGCQMVALNFQTMDLPMQQNMAVFEFN 645
Query: 426 GGCGYVKKPDLQMNVGPDGQVFNPKEI----LPVKKTLKIKVYMG 466
G GY+ K + PD Q FNP + + V TL I V G
Sbjct: 646 GQSGYLLKHEFMRR--PDKQ-FNPFSVDRIDVVVATTLSITVISG 687
>pdb|3OHM|B Chain B, Crystal Structure Of Activated G Alpha Q Bound To Its
Effector Phospholipase C Beta 3
Length = 885
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 78/240 (32%), Positives = 124/240 (51%), Gaps = 25/240 (10%)
Query: 33 AEGGTHMTAEQLRRFLLEVQGDDGGS--------ISDAEKVVDQVLKTRHHLAKFTRHTL 84
A+G ++T EQL F+ + Q D + S A ++++ + L R +
Sbjct: 234 AKGKPYLTLEQLMDFINQKQRDPRLNEVLYPPLRPSQARLLIEKYEPNQQFLE---RDQM 290
Query: 85 TLDDFHHYLFSSDLNP-PINYDQVHQDMTAPLSHYFIYTGHNSYLTGNQLSSDCSDVPII 143
+++ F YL + P+ + DMT PLS YFI + HN+YLT QL+ S
Sbjct: 291 SMEGFSRYLGGEENGILPLEALDLSTDMTQPLSAYFINSSHNTYLTAGQLAGTSSVEMYR 350
Query: 144 KALKRGVRVVELDIWPNS-TKDDVHVLHGRTLTTPVELMKCLKSIKEHAFSASPYPVVIT 202
+AL G R VELD+W +++ + HG T+TT V L L++I E AF SPYPV+++
Sbjct: 351 QALLWGCRCVELDVWKGRPPEEEPFITHGFTMTTEVPLRDVLEAIAETAFKTSPYPVILS 410
Query: 203 LEDHL-TPHLQAKVAKMLAETFGDMLFVPQCECLQEF--------PSPEELKYKIIISTK 253
E+H+ + QAK+A+ FGD L + E L ++ PSP++L +I++ K
Sbjct: 411 FENHVDSAKQQAKMAEYCRSIFGDALLI---EPLDKYPLAPGVPLPSPQDLMGRILVKNK 467
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 58/104 (55%), Gaps = 7/104 (6%)
Query: 367 DLVRFTQKNILRIYPKGTRFTSSNYKPLVGWMHGTQMVAFNMQGYGRAMWLMHGMFRSNG 426
+ V + ++ + RIYPKGTR SSNY P + W G Q+VA N Q AM L G+F NG
Sbjct: 634 EFVEYNKQQLSRIYPKGTRVDSSNYMPQLFWNVGCQLVALNFQTLDVAMQLNAGVFEYNG 693
Query: 427 GCGYVKKPDLQMNVGPDGQVFNP-KEILP---VKKTLKIKVYMG 466
GY+ KP+ PD + F+P E++ V L++KV G
Sbjct: 694 RSGYLLKPEFMRR--PD-KSFDPFTEVIVDGIVANALRVKVISG 734
>pdb|4GNK|B Chain B, Crystal Structure Of Galphaq In Complex With Full-length
Human Plcbeta3
pdb|4GNK|D Chain D, Crystal Structure Of Galphaq In Complex With Full-length
Human Plcbeta3
Length = 1235
Score = 111 bits (278), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 78/240 (32%), Positives = 124/240 (51%), Gaps = 25/240 (10%)
Query: 33 AEGGTHMTAEQLRRFLLEVQGDDGGS--------ISDAEKVVDQVLKTRHHLAKFTRHTL 84
A+G ++T EQL F+ + Q D + S A ++++ + L R +
Sbjct: 236 AKGKPYLTLEQLMDFINQKQRDPRLNEVLYPPLRPSQARLLIEKYEPNQQFL---ERDQM 292
Query: 85 TLDDFHHYLFSSDLNP-PINYDQVHQDMTAPLSHYFIYTGHNSYLTGNQLSSDCSDVPII 143
+++ F YL + P+ + DMT PLS YFI + HN+YLT QL+ S
Sbjct: 293 SMEGFSRYLGGEENGILPLEALDLSTDMTQPLSAYFINSSHNTYLTAGQLAGTSSVEMYR 352
Query: 144 KALKRGVRVVELDIWPNS-TKDDVHVLHGRTLTTPVELMKCLKSIKEHAFSASPYPVVIT 202
+AL G R VELD+W +++ + HG T+TT V L L++I E AF SPYPV+++
Sbjct: 353 QALLWGCRCVELDVWKGRPPEEEPFITHGFTMTTEVPLRDVLEAIAETAFKTSPYPVILS 412
Query: 203 LEDHL-TPHLQAKVAKMLAETFGDMLFVPQCECLQEF--------PSPEELKYKIIISTK 253
E+H+ + QAK+A+ FGD L + E L ++ PSP++L +I++ K
Sbjct: 413 FENHVDSAKQQAKMAEYCRSIFGDALLI---EPLDKYPLAPGVPLPSPQDLMGRILVKNK 469
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 58/104 (55%), Gaps = 7/104 (6%)
Query: 367 DLVRFTQKNILRIYPKGTRFTSSNYKPLVGWMHGTQMVAFNMQGYGRAMWLMHGMFRSNG 426
+ V + ++ + RIYPKGTR SSNY P + W G Q+VA N Q AM L G+F NG
Sbjct: 636 EFVEYNKQQLSRIYPKGTRVDSSNYMPQLFWNVGCQLVALNFQTLDVAMQLNAGVFEYNG 695
Query: 427 GCGYVKKPDLQMNVGPDGQVFNP-KEILP---VKKTLKIKVYMG 466
GY+ KP+ PD + F+P E++ V L++KV G
Sbjct: 696 RSGYLLKPEFMRR--PD-KSFDPFTEVIVDGIVANALRVKVISG 736
>pdb|3QR0|A Chain A, Crystal Structure Of S. Officinalis Plc21
Length = 816
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 43/70 (61%)
Query: 367 DLVRFTQKNILRIYPKGTRFTSSNYKPLVGWMHGTQMVAFNMQGYGRAMWLMHGMFRSNG 426
D V + +K I RIYPKGTR SSNY P + W G Q+VA N Q + AM + G+F NG
Sbjct: 559 DFVDYNKKQITRIYPKGTRVDSSNYVPQIYWNAGCQLVALNFQCFDIAMCVNLGVFEYNG 618
Query: 427 GCGYVKKPDL 436
GY+ KP+
Sbjct: 619 CSGYLLKPEF 628
>pdb|3QR1|A Chain A, Crystal Structure Of L. Pealei Plc21
pdb|3QR1|D Chain D, Crystal Structure Of L. Pealei Plc21
Length = 813
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 43/70 (61%)
Query: 367 DLVRFTQKNILRIYPKGTRFTSSNYKPLVGWMHGTQMVAFNMQGYGRAMWLMHGMFRSNG 426
D V + +K + RIYPKGTR SSNY P + W G Q+VA N Q + AM + G+F NG
Sbjct: 559 DFVDYNKKQLTRIYPKGTRVDSSNYVPQIYWNAGCQLVALNFQCFDVAMCVNLGVFEYNG 618
Query: 427 GCGYVKKPDL 436
GY+ KP+
Sbjct: 619 CSGYLLKPEF 628
>pdb|3L0I|A Chain A, Complex Structure Of Sidm/drra With The Wild Type Rab1
pdb|3L0I|C Chain C, Complex Structure Of Sidm/drra With The Wild Type Rab1
Length = 363
Score = 28.9 bits (63), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 24/52 (46%)
Query: 25 VKEAFNKYAEGGTHMTAEQLRRFLLEVQGDDGGSISDAEKVVDQVLKTRHHL 76
++E FN Y+E G H++A R L E I+ E V +Q R L
Sbjct: 68 LREEFNLYSEDGAHLSAPGTIRLLREKNLLPEEQIARIESVYNQAXSKRFEL 119
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.135 0.410
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,412,940
Number of Sequences: 62578
Number of extensions: 732846
Number of successful extensions: 1637
Number of sequences better than 100.0: 25
Number of HSP's better than 100.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 1587
Number of HSP's gapped (non-prelim): 34
length of query: 495
length of database: 14,973,337
effective HSP length: 103
effective length of query: 392
effective length of database: 8,527,803
effective search space: 3342898776
effective search space used: 3342898776
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 53 (25.0 bits)